################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:49:32 2021 # Report_file: c_0728_23.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00064.pdb # 4: usage_00065.pdb # 5: usage_00066.pdb # 6: usage_00093.pdb # 7: usage_00094.pdb # 8: usage_00115.pdb # 9: usage_00116.pdb # 10: usage_00166.pdb # 11: usage_00167.pdb # 12: usage_00168.pdb # 13: usage_00169.pdb # 14: usage_00197.pdb # 15: usage_00198.pdb # 16: usage_00199.pdb # 17: usage_00200.pdb # 18: usage_00201.pdb # 19: usage_00202.pdb # 20: usage_00203.pdb # 21: usage_00204.pdb # 22: usage_00228.pdb # 23: usage_00229.pdb # 24: usage_00239.pdb # 25: usage_00240.pdb # 26: usage_00307.pdb # 27: usage_00313.pdb # 28: usage_00314.pdb # # Length: 84 # Identity: 54/ 84 ( 64.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 84 ( 65.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 84 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 --GYEEFTVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAV-FSQED-CIKAVRGD 56 usage_00063.pdb 1 --GYEEFTVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAV-FSQED-CIKAVRGD 56 usage_00064.pdb 1 --GYEEFTVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAV-FSQED-CIKAVRGD 56 usage_00065.pdb 1 --GYEEFTVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAV-FSQED-CIKAVRGD 56 usage_00066.pdb 1 --GYEEFTVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAV-FSQED-CIKAVRGD 56 usage_00093.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00094.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00115.pdb 1 GYEEFT-MVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00116.pdb 1 GYEEFT-MVGKRATAILRKATRRLVQLIVSGKDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00166.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00167.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00168.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00169.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00197.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDQQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00198.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDQQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00199.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00200.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00201.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00202.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00203.pdb 1 -YEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 58 usage_00204.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00228.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00229.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00239.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00240.pdb 1 GYEEFT-MVGKRATAILRKATRRLVQLIVSGRDEQSVAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00307.pdb 1 GYEEFT-MVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00313.pdb 1 GYEEFT-MVGQRATAILRKATRRLIQLIVSGRNEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 usage_00314.pdb 1 GYEEFT-MVGQRATAILRKATRRLIQLIVSGRNEQSIAEAIIVAMVFSQEDCMIKAVRGD 59 VG RATAILRKATRRL QLIVSG QSiAEAIIVA FSQED IKAVRGD usage_00062.pdb 57 LNFVNRANQRLN-PHQLLRHFQKD 79 usage_00063.pdb 57 LNFV--ANQRLN-PHQLLRHFQKD 77 usage_00064.pdb 57 LNFVNRANQRLN-PHQLLRHFQKD 79 usage_00065.pdb 57 LNFVN----RLN-PHQLLRHFQKD 75 usage_00066.pdb 57 LNFV--NNQRLN-PHQLLRHFQKD 77 usage_00093.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00094.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00115.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00116.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00166.pdb 60 LNFVNRANQRLNPMHQLLRHFQK- 82 usage_00167.pdb 60 LNFVNRANQRLNPMHQLLRHFQK- 82 usage_00168.pdb 60 LNFGS----GLNPMHQLLRHFQKD 79 usage_00169.pdb 60 LNFGS----GLNPMHQLLRHFQKD 79 usage_00197.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00198.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00199.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00200.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00201.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00202.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00203.pdb 59 LNFGS----GLNPMHQLLRHFQKD 78 usage_00204.pdb 60 L--------GLNPMHQLLRHFQKD 75 usage_00228.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00229.pdb 60 LNFV-----RLNPMHQLLRHFQK- 77 usage_00239.pdb 60 LNFVNRANQRLNPMHQLLRHFQK- 82 usage_00240.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00307.pdb 60 LNFGS----GLNPMHQLLRHFQKD 79 usage_00313.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 usage_00314.pdb 60 LNFVNRANQRLNPMHQLLRHFQKD 83 L LN HQLLRHFQK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################