################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:28 2021 # Report_file: c_0435_71.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00490.pdb # 2: usage_00491.pdb # 3: usage_00722.pdb # 4: usage_00723.pdb # # Length: 112 # Identity: 28/112 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/112 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/112 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00490.pdb 1 -AVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK 57 usage_00491.pdb 1 TAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK 58 usage_00722.pdb 1 -GIVCIATVRSSGKLVAVKKMDLRKQQR--R-ELLFNEVVIMRDYQHENVVEMYNSYLVG 56 usage_00723.pdb 1 -GIVCIATVRSSGKLVAVKKMDLRKQQR--R-ELLFNEVVIMRDYQHENVVEMYNSYLVG 56 V A VA K L K L E M H N V Y S V usage_00490.pdb 58 DELWLVMKLLSGGSVLDIIKHI--------------------VAKG-EHKSG 88 usage_00491.pdb 59 DELWLVMKLLSGGSVLDIIKHI--------------------VAKG-EHKSG 89 usage_00722.pdb 57 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 103 usage_00723.pdb 57 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 103 DELW VM L GG DI H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################