################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:32 2021 # Report_file: c_0805_49.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00028.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00035.pdb # 5: usage_00171.pdb # 6: usage_00235.pdb # 7: usage_00309.pdb # 8: usage_00310.pdb # 9: usage_00393.pdb # 10: usage_00735.pdb # 11: usage_00788.pdb # 12: usage_00828.pdb # # Length: 51 # Identity: 5/ 51 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 51 ( 27.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 51 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --AHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 49 usage_00033.pdb 1 --AHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 49 usage_00034.pdb 1 --AHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 49 usage_00035.pdb 1 -DAHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 50 usage_00171.pdb 1 ETGREIFNFLLKLAREEGIPIIEDRLVEIRVK-DGKVTGFVTEKRGLVED- 49 usage_00235.pdb 1 --AHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 49 usage_00309.pdb 1 -DADEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGD 50 usage_00310.pdb 1 -DADEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGD 50 usage_00393.pdb 1 -DAHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 50 usage_00735.pdb 1 -EAALLAEFLSGYSKDRGVKHVVDEVLEVKLDDRGWISHVVTKEHGDIGGD 50 usage_00788.pdb 1 --AALLAKYLTKYSVERGVKHIVDDVREVSLDDRGWITGVRTGEHGDLTGD 49 usage_00828.pdb 1 -DAHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEAD 50 a a L rGv vD v v rG i T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################