################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:39 2021 # Report_file: c_1392_83.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00034.pdb # 2: usage_00369.pdb # 3: usage_00370.pdb # 4: usage_00371.pdb # 5: usage_00376.pdb # 6: usage_00377.pdb # 7: usage_00378.pdb # 8: usage_00379.pdb # 9: usage_00380.pdb # 10: usage_00399.pdb # 11: usage_00489.pdb # 12: usage_00490.pdb # 13: usage_00491.pdb # 14: usage_00492.pdb # 15: usage_00756.pdb # 16: usage_00766.pdb # 17: usage_00767.pdb # 18: usage_00820.pdb # 19: usage_00823.pdb # # Length: 65 # Identity: 33/ 65 ( 50.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 65 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 65 ( 47.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIFLA-------------------IQRRIKKVTHDM 39 usage_00369.pdb 1 --ELAQELHVWTDKSSLFEELQSLD-------------------------RRIKKVTHDM 33 usage_00370.pdb 1 IPELAQELHVWTDKSSLFEELQSLDIFLA-----------------SSIQRRIKKVTHDM 43 usage_00371.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIFLA-ELYKH----------ISSIQRRIKKVTHDM 47 usage_00376.pdb 1 IPELAQELHVWTDKSSLFEELQSLD------------------------QRRIKKVTHDM 36 usage_00377.pdb 1 --ELAQELHVWTDKSSLFEELQSLDI-----------------------QRRIKKVTHDM 35 usage_00378.pdb 1 -PELAQELHVWTDKSSLFEELQSL-------------------------QRRIKKVTHDM 34 usage_00379.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIF----------------------QRRIKKVTHDM 36 usage_00380.pdb 1 -PELAQELHVWTDKSSLFEELQSLD-------------------------RRIKKVTHDM 34 usage_00399.pdb 1 IPELAQELHVWTDKSSLFEELQSLDIFLA--------------------QRRIKKVTHDM 40 usage_00489.pdb 1 ---LAQELHVWTDKSSLFEELQSLDIFLA-ELYKHLDSSSNERPDISSIQRRIKKVTHDM 56 usage_00490.pdb 1 ---LAQELHVWTDKSSLFEELQSLDIFLA-ELYKHLDSSSNERPDISSIQRRIKKVTHDM 56 usage_00491.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIFLA-ELYKHLDSSSNERPDISSIQRRIKKVTHDM 57 usage_00492.pdb 1 ---LAQELHVWTDKSSLFEELQSLDIFLA-ELYKHLDSSSNERPDISSIQRRIKKVTHDM 56 usage_00756.pdb 1 -PELAQELHVWTDKSSLFEELQSLDIFLA-EL--------------SSIQRRIKKVTHDM 44 usage_00766.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIFLAE-----------------SIQRRIKKVTHDM 41 usage_00767.pdb 1 IPEFAQELHVWTDKSSLFEELQSLDIFLA-EL--------------SSIQRRIKKVTHDM 45 usage_00820.pdb 1 -PELAQELHVWTDKSSLFEELQSLDIFLA-----------------SSIQRRIKKVTHDM 42 usage_00823.pdb 1 --ELAQELHVWTDKSSLFEELQSLDIFLA--------------------QRRIKKVTHDM 38 lAQELHVWTDKSSLFEELQSL RRIKKVTHDM usage_00034.pdb 40 DMCYG 44 usage_00369.pdb 34 DMCYG 38 usage_00370.pdb 44 DMC-- 46 usage_00371.pdb 48 DMCYG 52 usage_00376.pdb 37 DMC-- 39 usage_00377.pdb 36 DMC-- 38 usage_00378.pdb 35 DMC-- 37 usage_00379.pdb 37 DMC-- 39 usage_00380.pdb 35 DMCYG 39 usage_00399.pdb 41 DMC-- 43 usage_00489.pdb 57 DMCYG 61 usage_00490.pdb 57 DMCYG 61 usage_00491.pdb 58 DMCYG 62 usage_00492.pdb 57 DMC-- 59 usage_00756.pdb 45 DMCYG 49 usage_00766.pdb 42 DMCYG 46 usage_00767.pdb 46 DMCYG 50 usage_00820.pdb 43 DMCYG 47 usage_00823.pdb 39 DMC-- 41 DMC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################