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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:01:57 2021
# Report_file: c_0004_29.html
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#====================================
# Aligned_structures: 6
#   1: usage_00047.pdb
#   2: usage_00048.pdb
#   3: usage_00049.pdb
#   4: usage_00050.pdb
#   5: usage_00333.pdb
#   6: usage_00358.pdb
#
# Length:        284
# Identity:      145/284 ( 51.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    215/284 ( 75.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           60/284 ( 21.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00047.pdb         1  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK   59
usage_00048.pdb         1  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK   59
usage_00049.pdb         1  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK   59
usage_00050.pdb         1  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK   59
usage_00333.pdb         1  VRSYKGHSHIVQDVVVSADGNYAVSASWDKTLRLWNLATGNSEARFVGHTGDVLSVAIDA   60
usage_00358.pdb         1  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK   60
                           VRSfKGHSHIVQDctltADGaYAlSASWDKTLRLWdvATGetyqRFVGHksDV SVdIDk

usage_00047.pdb        60  KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK-  111
usage_00048.pdb        60  KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK-  111
usage_00049.pdb        60  KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK-  111
usage_00050.pdb        60  KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK-  111
usage_00333.pdb        61  NSSKIISASRDKTIRVWNTVGDCAYVLLGHTDWVTKVRVAPKNLVDDGRITFVSAGMDKI  120
usage_00358.pdb        61  KASMIISGSRDKTIKVWTIKGQCLATLLGHN-------------------DW--------   93
                           kaS IISgSRDKTIkVWtikGqClatLLGHn                   t         

usage_00047.pdb       112  VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS  147
usage_00048.pdb       112  VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS  147
usage_00049.pdb       112  VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS  147
usage_00050.pdb       112  VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS  147
usage_00333.pdb       121  VRSWSLN-----------------------SYRIEADFIGH-NNYINVVQPSPDGSLAAS  156
usage_00358.pdb        94  VSQVRV-VPNEKADDDSVTIIKMVKAWNLNQFQIEADFIGHNSNI-NTLTASPDGTLIAS  151
                           V  w l                        qfqIEADFIGH n   NtltaSPDGtLiAS

usage_00047.pdb       148  AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD  205
usage_00048.pdb       148  AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD  205
usage_00049.pdb       148  AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD  205
usage_00050.pdb       148  AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD  205
usage_00333.pdb       157  AGKDGQIYVWNLKHKSAFMNFDAKDEVFALAFSPSRFWLTAATASGIKIYDLENEVLIDE  216
usage_00358.pdb       152  AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD  211
                           AGKDGeI lWNLa  k  ytlsAqDEVFsLAFSPnRyWLaAATAtGIKvfsLdpqyLvDd

usage_00047.pdb       206  LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ---  246
usage_00048.pdb       206  LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ---  246
usage_00049.pdb       206  LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVTA  249
usage_00050.pdb       206  LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ---  246
usage_00333.pdb       217  LKPEFAGYTKAQDPHAVSLAWSADGQTLFAGYTDNVIRVWQ---  257
usage_00358.pdb       212  LRPEFAGYSAAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ---  252
                           LrPEFAGYskAaePHAVSLAWSADGQTLFAGYTDNVIRVWQ   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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