################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:30 2021 # Report_file: c_0756_46.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00021.pdb # 2: usage_00090.pdb # 3: usage_00185.pdb # 4: usage_00235.pdb # 5: usage_00236.pdb # 6: usage_00238.pdb # # Length: 81 # Identity: 6/ 81 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 81 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 81 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 ILVSVQHANNEIGTIQPVEEISEVLA-GKAALHIDATASVGQIEVDVE---KIGADMLTI 56 usage_00090.pdb 1 LLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVP----GDLTTPIDMISI 56 usage_00185.pdb 1 RLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIR---ETDADVVTV 57 usage_00235.pdb 1 ILVSVQHANNEIGTIQPVEEISEVLA-GKAALHIDATASVGQIEVDVE---KIGADMLTI 56 usage_00236.pdb 1 ILVSVQHANNEIGTIQPVEEISEVLA-GKAALHIDATASVGQIEVDVE---KIGADMLTI 56 usage_00238.pdb 1 KLVAITHMSNTLGTVVPIKKIVELAHARGIPVLVDGSQGAVHLPVDVQ---DLGCDWYVF 57 LV h n G p D D usage_00021.pdb 57 SSNDIYGPKGVGALWIR---- 73 usage_00090.pdb 57 SGHKIGAPKGVGALVTRRREE 77 usage_00185.pdb 58 NAHAWGGPP-IGAMVFRD--- 74 usage_00235.pdb 57 SSNDIYGPKGVGALW------ 71 usage_00236.pdb 57 SSNDIYGPKGVGALWIR---- 73 usage_00238.pdb 58 TGHVYGPSG-IGVLYGR---- 73 p Gal #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################