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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:53:21 2021
# Report_file: c_1240_34.html
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#====================================
# Aligned_structures: 12
#   1: usage_00290.pdb
#   2: usage_01200.pdb
#   3: usage_01201.pdb
#   4: usage_01202.pdb
#   5: usage_01203.pdb
#   6: usage_01204.pdb
#   7: usage_01369.pdb
#   8: usage_01989.pdb
#   9: usage_02047.pdb
#  10: usage_02048.pdb
#  11: usage_02049.pdb
#  12: usage_02050.pdb
#
# Length:         48
# Identity:        3/ 48 (  6.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/ 48 ( 39.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/ 48 ( 52.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00290.pdb         1  MVILATES------SVDQ----SKAGAVYVH-SLLGIQPFARSFEMKE   37
usage_01200.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_01201.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_01202.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_01203.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_01204.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_01369.pdb         1  MVILATES--------D-----SKAGAVYVH-SLLGIQPFARSFEMKE   34
usage_01989.pdb         1  HCV-TAEDDIKSVSLLGNVLMA--QHAAEHDA--------AETIQLRD   37
usage_02047.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_02048.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_02049.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
usage_02050.pdb         1  MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE   37
                           mvi atEs        d       a Av  h         Ar femke


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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