################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:54 2021 # Report_file: c_1242_159.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00321.pdb # 2: usage_00833.pdb # 3: usage_00836.pdb # 4: usage_01057.pdb # 5: usage_01884.pdb # 6: usage_01885.pdb # 7: usage_02082.pdb # 8: usage_02227.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 43 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 43 ( 51.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00321.pdb 1 -LTLFHNPASP-YVRKV-VLLHETGQLNRVAL---QA------ 31 usage_00833.pdb 1 -VLVG-F--SM-GTGELARYVARYGH-ERVAKLAFLA------ 31 usage_00836.pdb 1 -VLVG-F--SM-GTGELARYVARYGH-ERVAKLAFLA------ 31 usage_01057.pdb 1 -WLVG-Y--SL-GGRVAMMAACQGLA-GL--CGVIVE-----G 30 usage_01884.pdb 1 -VLVG-F--SM-GTGEVARYVSSYGT-ARIAAVAFLA------ 31 usage_01885.pdb 1 -VLVG-F--SM-GTGEVARYVSSYGT-ARIAAVAFLA------ 31 usage_02082.pdb 1 VLAYY-S--GYAGNYAALTR----YA-ASFNAVAVDFYNITA- 34 usage_02227.pdb 1 -VLVG-F--SM-GTGEVARYVSSYGT-ARIAAVAFLA------ 31 s g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################