################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:31:30 2021 # Report_file: c_0076_2.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00076.pdb # 7: usage_00077.pdb # 8: usage_00078.pdb # 9: usage_00079.pdb # 10: usage_00080.pdb # 11: usage_00081.pdb # 12: usage_00082.pdb # 13: usage_00083.pdb # 14: usage_00084.pdb # 15: usage_00085.pdb # 16: usage_00086.pdb # # Length: 284 # Identity: 19/284 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/284 ( 32.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 187/284 ( 65.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 -----PRAVSLFFNWKQEFKTLEVTLRDINKLNKQDIKYLGKIFSSATNLRLHIKRCAAM 55 usage_00062.pdb 1 ---------------------------------KQDIKYLGKIFSSATNLRLHIKRCAAM 27 usage_00063.pdb 1 ----PPRAVSLFFNWKQEFKTLEVTLRDINKLNKQDIKYLGKIFSSATNLRLHIKRCAAM 56 usage_00064.pdb 1 ----PPRAVSLFFNWKQEFKTLEVTLRDINKLNKQDIKYLGKIFSSATNLRLHIKRCAAM 56 usage_00065.pdb 1 NEED-------------------------------------------------------- 4 usage_00076.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00077.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00078.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00079.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00080.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00081.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00082.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00083.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00084.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00085.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00086.pdb 1 --------------------------------NKQDIKYLGKIFSSATNLRLHIKRCAAM 28 usage_00061.pdb 56 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGLQNLSI-HRLHT-----QQLPG 108 usage_00062.pdb 28 AGRLSSVLRTCKNMHTLMVEA-SPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 80 usage_00063.pdb 57 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 109 usage_00064.pdb 57 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGLQNLSI-HRLHT-----QQLPG 109 usage_00065.pdb 5 -------------------------AKNLAEGLRSLKKM-RLLHLTHLSDIGEGM----D 34 usage_00076.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00077.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00078.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00079.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00080.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00081.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00082.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00083.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00084.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00085.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 usage_00086.pdb 29 AGRLSSVLRTCKNM-HTLMVEASPLTTDDEQYITSVTGL-QNLSIHRLHT-----QQLPG 81 ttddeqyitSvtgl hrLht g usage_00061.pdb 109 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 163 usage_00062.pdb 81 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 135 usage_00063.pdb 110 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 164 usage_00064.pdb 110 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 164 usage_00065.pdb 35 YIVKSLSEES-CDLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDISENYLEKDGNEAL 93 usage_00076.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00077.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00078.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00079.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00080.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00081.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00082.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00083.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00084.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00085.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 usage_00086.pdb 82 GLIDSLG--NLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLS-D--IGEGM 136 glidSLg n knLerliLddirmneedaKnLAegLrsLkKmrlLhlthls d igEgm usage_00061.pdb 164 DYIVKSLS---------------------------------------------------- 171 usage_00062.pdb 136 DYIVKSLS---------------------------------------------------- 143 usage_00063.pdb 165 DYIVKSLS---------------------------------------------------- 172 usage_00064.pdb 165 DYIVKSLS---------------------------------------------------- 172 usage_00065.pdb 94 QELIGRLGVLGELTTLMLPWCWDVHTSLPKLLKQLEGTPGLAKLGLKNWRLRDEEIKSLG 153 usage_00076.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00077.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00078.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00079.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00080.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00081.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00082.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00083.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00084.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00085.pdb 137 DYIVKSLS---------------------------------------------------- 144 usage_00086.pdb 137 DYIVKSLS---------------------------------------------------- 144 dyivksLs usage_00061.pdb 172 ----EESC-DLQEMKL---------------------------- 182 usage_00062.pdb 144 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 182 usage_00063.pdb 173 ----EESC-DLQEMKL---------------------------- 183 usage_00064.pdb 173 ----EESC-DLQEMKLV--------------------------- 184 usage_00065.pdb 154 EFLEMNPLRDLQQLDLAGHCVSSDGWLYFMNVFENLKQLVFFDF 197 usage_00076.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00077.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00078.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00079.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00080.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00081.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00082.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00083.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00084.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00085.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 usage_00086.pdb 145 ----EESC-DLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDI 183 eesc DLQemkL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################