################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:03 2021 # Report_file: c_1262_65.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00262.pdb # 2: usage_00283.pdb # 3: usage_01570.pdb # 4: usage_01571.pdb # 5: usage_01735.pdb # 6: usage_01736.pdb # 7: usage_01737.pdb # 8: usage_01738.pdb # 9: usage_01746.pdb # 10: usage_02165.pdb # 11: usage_02175.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 56 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 56 ( 48.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00262.pdb 1 --KSIGLLATSSE-AAYFAEIIEAVEKNC--FQKGY---TLILG-NAW-------- 39 usage_00283.pdb 1 -----LSKLAV-TSYKDIESLMSEGNKSRSS--------RSH-AVFKITLTHTLYD 41 usage_01570.pdb 1 ---IVNIGAVL-STRKHEQMFREAVNQAN--KR--I---QLQAT-SVT-------- 36 usage_01571.pdb 1 ---IVNIGAVL-STRKHEQMFREAVNQAN--KR--I---QLQAT-SVT-------- 36 usage_01735.pdb 1 ----VNIGAVL-STKKHEQIFREAVNQAN--FFHFTRKIQLNAT-SVT-------- 40 usage_01736.pdb 1 ----VNIGAVL-STKKHEQIFREAVNQAN--FFHFTRKIQLNAT-SVT-------- 40 usage_01737.pdb 1 ----VNIGAVL-STKKHEQIFREAVNQAN--FFHFTRKIQLNAT-SVT-------- 40 usage_01738.pdb 1 ----VNIGAVL-STKKHEQIFREAVNQAN--FFHFTRKIQLNAT-SVT-------- 40 usage_01746.pdb 1 --KIVNIGAVL-STKKHEQIFREAVNQAN--KRHFTRKIQLQAT-SVT-------- 42 usage_02165.pdb 1 -----NIGAVL-STRKHEQMFREAVNQAN--KRHGSWKIQLQAT-SVTH-K----- 41 usage_02175.pdb 1 DPKIVNIGAVL-STKKHEQIFREAVNQAN--FFHFTRKIQLNAT-SVT-------- 44 a k eavn l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################