################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:07 2021 # Report_file: c_0650_138.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00143.pdb # 2: usage_00615.pdb # 3: usage_00892.pdb # 4: usage_00951.pdb # # Length: 68 # Identity: 3/ 68 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 68 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 68 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 SY-YIIQHKPKNSEEPYKEIDGIA--TTRYSVAGLSPYSDYEFRVVAVNNI----GRGPA 53 usage_00615.pdb 1 --DLTVKFDNYDL---HYVKEV-T--DNSVKVDGIIPGIYSVTVSGTAI--DTENN-EYY 49 usage_00892.pdb 1 -G-YRITVVAAGEGIPIFEDFV-DSSVGYYTVTGLEPGIDYDISVITLING----GESAP 53 usage_00951.pdb 1 -G-YRITVVAAGEGIPIFEDFV-DSSVGYYTVTGLEPGIDYDISVITLING----GESA- 52 y i e v y V Gl Pgidy v t i g usage_00143.pdb 54 SEPVL-TQ 60 usage_00615.pdb 50 INGNS--- 54 usage_00892.pdb 54 TTLTQQT- 60 usage_00951.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################