################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:36:46 2021 # Report_file: c_0147_17.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00355.pdb # 2: usage_00432.pdb # 3: usage_00447.pdb # 4: usage_00448.pdb # 5: usage_00449.pdb # 6: usage_00450.pdb # 7: usage_00451.pdb # 8: usage_00535.pdb # 9: usage_00549.pdb # 10: usage_00550.pdb # 11: usage_00607.pdb # 12: usage_00608.pdb # 13: usage_00609.pdb # 14: usage_00610.pdb # 15: usage_00611.pdb # 16: usage_00643.pdb # # Length: 127 # Identity: 21/127 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/127 ( 48.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/127 ( 28.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00355.pdb 1 VQLQESGAELVRPGASVKLSCKAS------GYTFSISWINWVKQRPGQGLEWIGNIYPSG 54 usage_00432.pdb 1 VQLQQSGPELVKPGASVKISCKAS------GYSFTSYWIHWIKQRPGQGLEWIGMIDPSD 54 usage_00447.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00448.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00449.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00450.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00451.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00535.pdb 1 VQLQQSGPELVKPGASVKISCKAS------GYSFNFYWMHWVKQRPGQGLEWIGMIDPSE 54 usage_00549.pdb 1 -QLQQSGPELVKPGASVKISCKAS------GYSFNFYWMHWVKQRPGQGLEWIGMIDPSE 53 usage_00550.pdb 1 VQLQQSGPELVKPGASVKISCKAS------GYSFNFYWMHWVKQRPGQGLEWIGMIDPSE 54 usage_00607.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00608.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00609.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00610.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00611.pdb 1 VQLQQSGPELVRPGASVKMSCKAS------GYTFTNYWMHWVKQRPGQALEWIGMIDPSK 54 usage_00643.pdb 1 --LTQPRSVSGSPGQSVTISCTGTSRDVGG----Y-NYVSWYQQHPGKAPKLIIHD---- 49 Lqqsg elv PGaSVk SCkas w W kQrPGq lewIg i usage_00355.pdb 55 GYTNYNQKFKDKATLTVDKSSNTAYIQLSSPTSEDSAVYYCTRGY-------GHLDYWGQ 107 usage_00432.pdb 55 GETRLNQRFQGRATLTVDESTSTAYMQLRSPTSEDSAVYYCTRLKEYGNYDSFYFDVWG- 113 usage_00447.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00448.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00449.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00450.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00451.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00535.pdb 55 SESRLNQKFKDKATLTVDRSSSTAHMQLSSPTSEDSAVYYCTRSNYR----YDYFDVWGA 110 usage_00549.pdb 54 SESRLNQKFKDKATLTVDRSSSTAHMQLSSPTSEDSAVYYCTRSNYR----YDYFDVWGA 109 usage_00550.pdb 55 SESRLNQKFKDKATLTVDRSSSTAHMQLSSPTSEDSAVYYCTRSNYR----YDYFDVWGA 110 usage_00607.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00608.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00609.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00610.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00611.pdb 55 SETTLNQKFRGKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAREV-------YYFDYWGQ 107 usage_00643.pdb 50 V-IERSSGVPDRFSGSKSG--NTASLTISGLQAEDEADYYCWSFAG-------SYYVFGT 99 nq f atl vd TA qlss tsEDsAvYYC r d wG usage_00355.pdb 108 GTTLTVS 114 usage_00432.pdb ------- usage_00447.pdb 108 GTTLTVS 114 usage_00448.pdb 108 GTTLTVS 114 usage_00449.pdb 108 GTTLTVS 114 usage_00450.pdb 108 GTTLTVS 114 usage_00451.pdb 108 GTTLTVS 114 usage_00535.pdb 111 GTTVTVS 117 usage_00549.pdb 110 GTTVTVS 116 usage_00550.pdb 111 GTTVTVS 117 usage_00607.pdb 108 GTTLTVS 114 usage_00608.pdb 108 GTTLTVS 114 usage_00609.pdb 108 GTTLTVS 114 usage_00610.pdb 108 GTTLTVS 114 usage_00611.pdb 108 GTTLTVS 114 usage_00643.pdb 100 GTDVTV- 105 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################