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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:18:32 2021
# Report_file: c_1274_88.html
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#====================================
# Aligned_structures: 5
#   1: usage_00010.pdb
#   2: usage_00011.pdb
#   3: usage_00176.pdb
#   4: usage_00619.pdb
#   5: usage_00644.pdb
#
# Length:         61
# Identity:        0/ 61 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      0/ 61 (  0.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           48/ 61 ( 78.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00010.pdb         1  -----T---V-HIVPHEFVTWVLSVCQSLEDVKEKIRS----------------------   29
usage_00011.pdb         1  -----T---V-HIVPHEFVTWVLSVCQSLEDVKEKIRS----------------------   29
usage_00176.pdb         1  ANTVWL---G-LKRG--------Q-LQRNYVWRFLELCNAGLSVEDIKRQVME-------   40
usage_00619.pdb         1  ------LYI----------------CGLKSIRYKVMDILK-------------DEKKKKR   25
usage_00644.pdb         1  ---------TIPAS---EPAR-AV-VTDESLKQVIEYLDK--------------------   26
                                                                                       

usage_00010.pdb            -     
usage_00011.pdb            -     
usage_00176.pdb            -     
usage_00619.pdb        26  V   26
usage_00644.pdb            -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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