################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:09 2021 # Report_file: c_0398_85.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00477.pdb # 2: usage_00478.pdb # 3: usage_00479.pdb # 4: usage_00480.pdb # 5: usage_00481.pdb # 6: usage_00482.pdb # 7: usage_00483.pdb # 8: usage_00484.pdb # 9: usage_00485.pdb # 10: usage_00486.pdb # 11: usage_00487.pdb # 12: usage_00488.pdb # 13: usage_00501.pdb # 14: usage_00535.pdb # 15: usage_00536.pdb # 16: usage_00537.pdb # 17: usage_00862.pdb # 18: usage_00863.pdb # 19: usage_00864.pdb # 20: usage_00865.pdb # # Length: 88 # Identity: 72/ 88 ( 81.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 88 ( 84.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 88 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00477.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00478.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00479.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00480.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00481.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00482.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLQI 59 usage_00483.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDGVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00484.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDGVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00485.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNL--------NTTLNLFAENGAYLLHI 51 usage_00486.pdb 1 QGVNIYNISAGTSVDLAAPVTTGDIVTFFSSAANLNAGAGNPNNTTLNLFAENGAYLLHI 60 usage_00487.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTANLFAENGAYLLHI 59 usage_00488.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTANLFAENGAYLLHI 59 usage_00501.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00535.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00536.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00537.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00862.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00863.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00864.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 usage_00865.pdb 1 -GVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHI 59 GVNIYNISAGTSVDLAAPVTTGD VTFFSSAlNL NTT NLFAENGAYLLhI usage_00477.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00478.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00479.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRV-- 85 usage_00480.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00481.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRV-- 85 usage_00482.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00483.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00484.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00485.pdb 52 AFRLQENVIIFNSRQPDGPWLVEQRV-- 77 usage_00486.pdb 61 AFRLQENVIIFNSRQPDGPWLVEQRVS- 87 usage_00487.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRV-- 85 usage_00488.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00501.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00535.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRV-- 85 usage_00536.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVSD 87 usage_00537.pdb 60 AFRLQENVIIFNSRQPDGPWLVEQRVS- 86 usage_00862.pdb 60 AFRLQANVIIFNSRQPDGPWLVEQRVSD 87 usage_00863.pdb 60 AFRLQANVIIFNSRQPDGPWLVEQRVSD 87 usage_00864.pdb 60 AFRLQANVIIFNSRQPDGPWLVEQRV-- 85 usage_00865.pdb 60 AFRLQANVIIFNSRQPDGPWLVEQRVS- 86 AFRLQ NVIIFNSRQPDGPWLVEQRV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################