################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:35 2021 # Report_file: c_1138_20.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00011.pdb # 2: usage_00083.pdb # 3: usage_00150.pdb # 4: usage_00633.pdb # 5: usage_00635.pdb # 6: usage_00723.pdb # 7: usage_00817.pdb # 8: usage_00818.pdb # 9: usage_00863.pdb # 10: usage_00864.pdb # 11: usage_00866.pdb # # Length: 169 # Identity: 108/169 ( 63.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/169 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/169 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 GHLWNVMITYHGVLMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRLDNLSYWMYVCGVA 60 usage_00083.pdb 1 GHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 60 usage_00150.pdb 1 GHLWNVMITYHGVLMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRLNNLSYWMYVCGVA 60 usage_00633.pdb 1 GHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPAMAFPRMNNLSYWLYVAGTS 60 usage_00635.pdb 1 GHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPAMAFPRMNNLSYWLYVAGTS 60 usage_00723.pdb 1 GHLWNVMITYHGVLMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRLNNLSYWMYVCGVA 60 usage_00817.pdb 1 ---------------------PALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 39 usage_00818.pdb 1 ---------------------PALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 39 usage_00863.pdb 1 ------------------VVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 42 usage_00864.pdb 1 -------------------VIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 41 usage_00866.pdb 1 -------------------VIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTS 41 PALFGGFGNYFMPLHIGAP MAFPR nNLSYW YV G usage_00011.pdb 61 LGVASLLAPGGNDQMGSGVGWVLYPPLSTTEAGYSMDLAIFAVHVSGASSILGAINIITT 120 usage_00083.pdb 61 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 120 usage_00150.pdb 61 LGVASLLAPGGNDQMGSGVGWVLYPPLSTTEAGYSMDLAIFAVHVSGASSILGAINIITT 120 usage_00633.pdb 61 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 120 usage_00635.pdb 61 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 120 usage_00723.pdb 61 LGVASLLAPGGNDQMGSGVGWVLYPPLSTTEAGYSMDLAIFAVHVSGASSILGAINIITT 120 usage_00817.pdb 40 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 99 usage_00818.pdb 40 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 99 usage_00863.pdb 43 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 102 usage_00864.pdb 42 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 101 usage_00866.pdb 42 LAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITT 101 L VASL APGGN Q GSG GWVLYPPLST E GYS DLAIFAVH SGASSILGAIN ITT usage_00011.pdb 121 FLNMRAPGMTLFKVPLFAWSVFITAWLILLSLPVLAGAITMLLMDR--- 166 usage_00083.pdb 121 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDR--- 166 usage_00150.pdb 121 FLNMRAPGMTLFKVPLFAWSVFITAWLILLSLPVLAGAITMLLMDRNFG 169 usage_00633.pdb 121 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDR--- 166 usage_00635.pdb 121 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDR--- 166 usage_00723.pdb 121 FLNMRAPGMTLFKVPLFAWSVFITAWLILLSLPVLAGAITMLLMDR--- 166 usage_00817.pdb 100 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFG 148 usage_00818.pdb 100 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFG 148 usage_00863.pdb 103 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDR--- 148 usage_00864.pdb 102 FLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDR--- 147 usage_00866.pdb 102 FLNMRAPGMTMHKVPLFAWSIFVTAWLILL------------------- 131 FLNMRAPGMT KVPLFAWS F TAWLILL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################