################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:15:03 2021 # Report_file: c_0886_11.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00032.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00047.pdb # 5: usage_00072.pdb # 6: usage_00129.pdb # 7: usage_00206.pdb # 8: usage_00266.pdb # 9: usage_00312.pdb # 10: usage_00313.pdb # 11: usage_00328.pdb # 12: usage_00329.pdb # 13: usage_00330.pdb # 14: usage_00333.pdb # 15: usage_00334.pdb # 16: usage_00335.pdb # 17: usage_00340.pdb # 18: usage_00341.pdb # 19: usage_00373.pdb # 20: usage_00374.pdb # 21: usage_00375.pdb # 22: usage_00380.pdb # 23: usage_00527.pdb # 24: usage_00528.pdb # 25: usage_00544.pdb # # Length: 124 # Identity: 108/124 ( 87.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/124 ( 87.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/124 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00034.pdb 1 RKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 60 usage_00035.pdb 1 --------EPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 52 usage_00047.pdb 1 RKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 60 usage_00072.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00129.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00206.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00266.pdb 1 RKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 60 usage_00312.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00313.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00328.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00329.pdb 1 RKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 60 usage_00330.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00333.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00334.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00335.pdb 1 ---FCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 57 usage_00340.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00341.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00373.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00374.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00375.pdb 1 -------MEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 53 usage_00380.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00527.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00528.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 usage_00544.pdb 1 -KPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV 59 EPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHV usage_00032.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00034.pdb 61 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 118 usage_00035.pdb 53 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 109 usage_00047.pdb 61 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 117 usage_00072.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00129.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 110 usage_00206.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 117 usage_00266.pdb 61 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDM 120 usage_00312.pdb 60 LRLHLQSNHPDDIFLLPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00313.pdb 60 LRLHLQSNHPDDIFLLPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00328.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 111 usage_00329.pdb 61 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 117 usage_00330.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 111 usage_00333.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 117 usage_00334.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 117 usage_00335.pdb 58 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 115 usage_00340.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 111 usage_00341.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 111 usage_00373.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 117 usage_00374.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 111 usage_00375.pdb 54 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 110 usage_00380.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYR-- 117 usage_00527.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00528.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 usage_00544.pdb 60 LRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY--- 116 LRLHLQSNHPDDIFL PKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIY usage_00032.pdb ---- usage_00034.pdb ---- usage_00035.pdb ---- usage_00047.pdb ---- usage_00072.pdb ---- usage_00129.pdb ---- usage_00206.pdb ---- usage_00266.pdb 121 Y--- 121 usage_00312.pdb ---- usage_00313.pdb ---- usage_00328.pdb ---- usage_00329.pdb ---- usage_00330.pdb ---- usage_00333.pdb 118 -DMY 120 usage_00334.pdb 118 -DM- 119 usage_00335.pdb 116 -DMY 118 usage_00340.pdb ---- usage_00341.pdb ---- usage_00373.pdb ---- usage_00374.pdb ---- usage_00375.pdb ---- usage_00380.pdb ---- usage_00527.pdb ---- usage_00528.pdb ---- usage_00544.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################