################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:54 2021 # Report_file: c_1403_20.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00085.pdb # 2: usage_00616.pdb # 3: usage_00617.pdb # 4: usage_00622.pdb # 5: usage_00623.pdb # 6: usage_01262.pdb # 7: usage_01308.pdb # 8: usage_01309.pdb # # Length: 47 # Identity: 17/ 47 ( 36.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 47 ( 85.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 47 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 -ELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQEVS 46 usage_00616.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---- 43 usage_00617.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQ------ 41 usage_00622.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---- 43 usage_00623.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQ------ 41 usage_01262.pdb 1 -ELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---- 42 usage_01308.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---- 43 usage_01309.pdb 1 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---- 43 ELDlvFNFyKvYtvvDEmflaGEIrETSqtkvlKqllmlq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################