################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:00 2021 # Report_file: c_0877_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00089.pdb # 2: usage_00135.pdb # 3: usage_00138.pdb # 4: usage_00139.pdb # 5: usage_00180.pdb # 6: usage_00186.pdb # 7: usage_00285.pdb # 8: usage_00286.pdb # 9: usage_00297.pdb # 10: usage_00298.pdb # # Length: 85 # Identity: 37/ 85 ( 43.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 85 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 85 ( 4.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 SPEQMNR-MYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 59 usage_00135.pdb 1 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 60 usage_00138.pdb 1 SPEQMNR---NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 57 usage_00139.pdb 1 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 60 usage_00180.pdb 1 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 60 usage_00186.pdb 1 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 60 usage_00285.pdb 1 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 60 usage_00286.pdb 1 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 60 usage_00297.pdb 1 SPEQMNR---NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 57 usage_00298.pdb 1 SPEQMNR-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 59 SPE N KSDIW LGC LYELC L F A S K L KI G F YS usage_00089.pdb 60 LNEIITRMLNLKDYHRPSVEEILEN 84 usage_00135.pdb 61 LNEIITRMLNLKDYHRPSVEEILE- 84 usage_00138.pdb 58 LNEIITRMLNLKDYHRPSVEEILE- 81 usage_00139.pdb 61 LNEIITRMLNLKDYHRPSVEEILEN 85 usage_00180.pdb 61 LRSLVSQLFKRNPRDRPSVNSILE- 84 usage_00186.pdb 61 LRSLVSQLFKRNPRDRPSVNSILEK 85 usage_00285.pdb 61 LNEIITRMLNLKDYHRPSVEEILE- 84 usage_00286.pdb 61 LNEIITRMLNLKDYHRPSVEEILE- 84 usage_00297.pdb 58 LNEIITRMLNLKDYHRPSVEEILE- 81 usage_00298.pdb 60 LNEIITRMLNLKDYHRPSVEEILE- 83 L RPSV ILE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################