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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:56:09 2021
# Report_file: c_0118_4.html
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#====================================
# Aligned_structures: 13
#   1: usage_00001.pdb
#   2: usage_00003.pdb
#   3: usage_00038.pdb
#   4: usage_00065.pdb
#   5: usage_00076.pdb
#   6: usage_00096.pdb
#   7: usage_00141.pdb
#   8: usage_00262.pdb
#   9: usage_00323.pdb
#  10: usage_00372.pdb
#  11: usage_00427.pdb
#  12: usage_00488.pdb
#  13: usage_00497.pdb
#
# Length:        127
# Identity:       48/127 ( 37.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     58/127 ( 45.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/127 ( 12.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNS   60
usage_00003.pdb         1  VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQLPGKGLEWLGMIWGDGNTAYNS   60
usage_00038.pdb         1  VQLQESGPGLVRPSQTLSLTCTVSGFSLTGYGVNWVRQPPGRGLEWIGMIWGDGNTDYNS   60
usage_00065.pdb         1  VQLLESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYNS   60
usage_00076.pdb         1  VQLKQSGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQSPGKGLEWLGMIWGDGRTDYKS   60
usage_00096.pdb         1  VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNS   60
usage_00141.pdb         1  VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNS   60
usage_00262.pdb         1  -QLKESGPVLVAPSQSLFISCTVSGFSLTRYGVHWVRQSPGKGLEWLGVIWAGGTTNYNS   59
usage_00323.pdb         1  VQLKESGPGLVQPSQTLSLTCTVSGFSLTNNNVNWVRQATGRGLEWMGGVWAGGATDYNS   60
usage_00372.pdb         1  -QLKESGPGLVAPGGSLSITCTVSGFSLTDSSINWVRQPPGKGLEWLGMIWGDGRIDYAD   59
usage_00427.pdb         1  VQLKESGPGLVAPGGSLSITCTVSGFSLTDSSINWVRQPPGKGLEWLGMIWGDGRIDYAD   60
usage_00488.pdb         1  VQLQESGPGLVRPSQTLSLTCTVSGFSLTGYGVNWVRQPPGRGLEWIGMIWGDGNTDYNS   60
usage_00497.pdb         1  VQLKESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNS   60
                            QL eSGPgLV P   Ls tCTVSGFSLT     WVRQ pG GLEW G iW  G   Y  

usage_00001.pdb        61  ALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARER------D-----YRLDYWG--Q  107
usage_00003.pdb        61  ALKSRLSISKDNSKSQVFLEMDSLHTDDTARYYCARER------D-----YRLDYWG--Q  107
usage_00038.pdb        61  ALKSRVTMLKDTSKNQFSLRLSSVTAADTAVYYCARER------D-----YRLDYWG--Q  107
usage_00065.pdb        61  ALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHW------GGYYIPYGMDHWG--Q  112
usage_00076.pdb        61  ALKSRLSITKDNSKSQVFLKMNSLQTDDTARYFCASDY------Y-----GSGSFAYWGQ  109
usage_00096.pdb        61  ALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARER------D-----YRLDYWG--Q  107
usage_00141.pdb        61  ALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARER------D-----YRLDYWG--Q  107
usage_00262.pdb        60  AFMSRLTISKDNSKSQVFLKMNSLQTDDTAIYYCVKAY------R-----NAMDYWG--Q  106
usage_00323.pdb        61  ALKSRLTITRDTSKSQVFLKMHSLQSEDTATYYCARDGGYSSSTL-----YAMDAWG--Q  113
usage_00372.pdb        60  ALKSRLSISKDSSKSQVFLEMTSLRTDDTATYYCARDG------Y-----FPYAMDFWGQ  108
usage_00427.pdb        61  ALKSRLSISKDSSKSQVFLEMTSLRTDDTATYYCARDG------Y-----FPYAMDFWGQ  109
usage_00488.pdb        61  ALKSRVTMLKDTSKNQFSLRLSSVTAADTAVYYCARER------D-----YRLDYWG--Q  107
usage_00497.pdb        61  ALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARER------D-----YRLDYWG--Q  107
                           Al SR    kD SK Q  L   S    DTA YyCa                        Q

usage_00001.pdb       108  GTTLTV-  113
usage_00003.pdb       108  GTTVTV-  113
usage_00038.pdb       108  GSLVTV-  113
usage_00065.pdb       113  GTTVTV-  118
usage_00076.pdb       110  GTLVTV-  115
usage_00096.pdb       108  GTTLTV-  113
usage_00141.pdb       108  GTTLTV-  113
usage_00262.pdb       107  GTSVTVS  113
usage_00323.pdb       114  GTTVTVS  120
usage_00372.pdb       109  GTSVTVS  115
usage_00427.pdb       110  GTSVTVS  116
usage_00488.pdb       108  GSLVT--  112
usage_00497.pdb       108  GTTLTV-  113
                           G   T  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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