################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:16 2021 # Report_file: c_1198_43.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00197.pdb # 2: usage_00457.pdb # 3: usage_00667.pdb # 4: usage_00668.pdb # 5: usage_01018.pdb # 6: usage_01019.pdb # 7: usage_01170.pdb # 8: usage_01343.pdb # 9: usage_01763.pdb # # Length: 34 # Identity: 21/ 34 ( 61.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 34 ( 61.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 34 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00197.pdb 1 VFPPEVAVFEPSEAEISHT-QKATLVCLATGFYP 33 usage_00457.pdb 1 VFPPEVAVFEPSEAEISHT-QKATLVCLATGFYP 33 usage_00667.pdb 1 --PPKVSLFEPSKAEI-ANKQKATLVCLARGFFP 31 usage_00668.pdb 1 --PPKVSLFEPSKAEI-ANKQKATLVCLARGFFP 31 usage_01018.pdb 1 ---PKVSLFEPSKAEI-ANKQKATLVCLARGFFP 30 usage_01019.pdb 1 ---PKVSLFEPSKAEI-ANKQKATLVCLARGFFP 30 usage_01170.pdb 1 VFPPEVAVFEPSEAEISHT-QKATLVCLATGFYP 33 usage_01343.pdb 1 VFPPEVAVFEPSEAEISHT-QKATLVCLATGFYP 33 usage_01763.pdb 1 VFPPEVAVFEPSEAEISHT-QKATLVCLATGFYP 33 P V FEPS AEI QKATLVCLA GF P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################