################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:00 2021 # Report_file: c_1181_62.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00033.pdb # 2: usage_00066.pdb # 3: usage_00079.pdb # 4: usage_00699.pdb # 5: usage_00840.pdb # 6: usage_00841.pdb # 7: usage_00842.pdb # 8: usage_00868.pdb # 9: usage_00926.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 39 ( 5.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 39 ( 56.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -GTYYFRILSPAKALNSKGFVNIGN--GEYLLA------ 30 usage_00066.pdb 1 GM-WVKVRGSV--QND--------TFVRDLVIIANDLNE 28 usage_00079.pdb 1 ET-YVKVAGHL--RSF--------Q--NKKSLVAFKIMP 26 usage_00699.pdb 1 ----VMVMGVV--QAC--------S--PEPCLQAVKMTD 23 usage_00840.pdb 1 NV-YVRVLGTL--KSF--------Q--NRRSISSGHMRP 26 usage_00841.pdb 1 -V-YVRVLGTL--KSF--------Q--NRRSISSGHMRP 25 usage_00842.pdb 1 NV-YVRVLGTL--KSF--------Q--NRRSISSGHMRP 26 usage_00868.pdb 1 -D-TIRVRGSI--RTY--------R--EEREIHATTYYK 25 usage_00926.pdb 1 ----VKVAGHL--RSF--------Q--NKKSLVAFKIMP 23 v g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################