################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:35 2021 # Report_file: c_1437_23.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00331.pdb # 2: usage_00533.pdb # 3: usage_00534.pdb # 4: usage_00670.pdb # 5: usage_00671.pdb # 6: usage_00672.pdb # 7: usage_00673.pdb # 8: usage_00674.pdb # 9: usage_00675.pdb # 10: usage_00698.pdb # 11: usage_00699.pdb # 12: usage_00882.pdb # 13: usage_00883.pdb # # Length: 66 # Identity: 34/ 66 ( 51.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 66 ( 51.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 66 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00331.pdb 1 TLEELQTVHSEAHTLLYGTNPL---D--------S-DTIWNEVHSAGAARLAVGCVVELV 48 usage_00533.pdb 1 SLEELQSVHSERHVLLYGTNPLSVM-LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 59 usage_00534.pdb 1 SLEELQSVHSERHVLLYGTNP-----LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 55 usage_00670.pdb 1 SLEELQSVHSERHVLLYGTNPLSVM-LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 59 usage_00671.pdb 1 SLEELQSVHSERHVLLYGTN------LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 54 usage_00672.pdb 1 SLEELQSVHSERHVLLYGTNPLSVM-LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 59 usage_00673.pdb 1 SLEELQSVHSERHVLLYGTNP-----LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 55 usage_00674.pdb 1 SLEELQSVHSERHVLLYGTNPLSVM-LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 59 usage_00675.pdb 1 SLEELQSVHSERHVLLYGTNP-----LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 55 usage_00698.pdb 1 TLEELQTVHSEAHTLLYGTNP-------------S-DTIWNEVHSAGAARLAVGCVVELV 46 usage_00699.pdb 1 TLEELQTVHSEAHTLLYGTNPL---------------TIWNEVHSAGAARLAVGCVVELV 45 usage_00882.pdb 1 SLEELQSVHSERHVLLYGTNPLSVM-LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 59 usage_00883.pdb 1 SLEELQSVHSERHVLLYGTNP-----LPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 55 LEELQ VHSE H LLYGTN TIWNE HS AAR A G V L usage_00331.pdb 49 FKVATG 54 usage_00533.pdb 60 FKVASR 65 usage_00534.pdb 56 FKVASR 61 usage_00670.pdb 60 FKVASR 65 usage_00671.pdb 55 FKVASR 60 usage_00672.pdb 60 FKVASR 65 usage_00673.pdb 56 FKVASR 61 usage_00674.pdb 60 FKVASR 65 usage_00675.pdb 56 FKVASR 61 usage_00698.pdb 47 FKVATG 52 usage_00699.pdb 46 FKVATG 51 usage_00882.pdb 60 FKVASR 65 usage_00883.pdb 56 FKVASR 61 FKVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################