################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:34 2021 # Report_file: c_0905_178.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00298.pdb # 2: usage_00911.pdb # 3: usage_00938.pdb # 4: usage_00941.pdb # 5: usage_01095.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 74 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 74 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00298.pdb 1 ---DTRV-AKGETALLECGPPKGIP--E----PTLIWIKDG-VPLDDRV-RIV-----D- 42 usage_00911.pdb 1 P--GKVIKQN-NKYYFQ--TVLNN----ASFWKEYKFYNANNQEL-------A----TTV 40 usage_00938.pdb 1 ---NRSVVAGSSETTLECIANARP-VEE----LSVHWKRNG-VRLT---SGLH----SY- 43 usage_00941.pdb 1 ---NTSVVAGTSEVTMECVANARP-LIK----LHIVWKKDG-APLS---SGIS----DY- 43 usage_01095.pdb 1 -YLSWEVTGE-SNVLLKCKVANIKK--E----THIVWYKDE-REIS---VDEKHDFK--- 45 v w l usage_00298.pdb 43 ------GGNLLISN 50 usage_00911.pdb 41 VNDNKKADTRTIN- 53 usage_00938.pdb 44 ------GRRLTIT- 50 usage_00941.pdb 44 ------NRRLTIA- 50 usage_01095.pdb 46 ------DGICTLL- 52 ti #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################