################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:15:30 2021 # Report_file: c_0975_10.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00015.pdb # 8: usage_00018.pdb # 9: usage_00019.pdb # 10: usage_00026.pdb # 11: usage_00027.pdb # 12: usage_00039.pdb # 13: usage_00040.pdb # 14: usage_00046.pdb # 15: usage_00049.pdb # 16: usage_00051.pdb # 17: usage_00070.pdb # 18: usage_00071.pdb # 19: usage_00072.pdb # 20: usage_00073.pdb # 21: usage_00074.pdb # 22: usage_00106.pdb # 23: usage_00107.pdb # 24: usage_00109.pdb # 25: usage_00110.pdb # # Length: 57 # Identity: 11/ 57 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 57 ( 31.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 57 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---RKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEER----- 47 usage_00005.pdb 1 ----KKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERD---- 47 usage_00006.pdb 1 ----KKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEER----- 46 usage_00007.pdb 1 ---RKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEK-------- 44 usage_00009.pdb 1 EKIIQKRVK--KGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYE---------- 45 usage_00010.pdb 1 -KIIQKRVK--KGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQ--------- 45 usage_00015.pdb 1 ----SKRLR--KGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKEHEKE--- 48 usage_00018.pdb 1 ----KRRIR--KGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFES--------- 42 usage_00019.pdb 1 ---IKRRIR--KGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERE----- 47 usage_00026.pdb 1 -CILSKRLR--KGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQK--------- 45 usage_00027.pdb 1 ---LSKRLR--KGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQK--------- 43 usage_00039.pdb 1 -SIIKRRIR--KGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQ--------- 45 usage_00040.pdb 1 ----KRRIR--KGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEER-------- 43 usage_00046.pdb 1 ESIRKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKE------- 48 usage_00049.pdb 1 ----KKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYE---------- 41 usage_00051.pdb 1 -SIRKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERD---- 50 usage_00070.pdb 1 ----KKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERDRASG 51 usage_00071.pdb 1 ----SKRLR--KGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKK-------- 43 usage_00072.pdb 1 ESIEKKRIR--KGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQ---------- 45 usage_00073.pdb 1 ---EKKRIR--KGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQ----- 47 usage_00074.pdb 1 ----KRRIR--KGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEERE------- 44 usage_00106.pdb 1 ---EKKRIR--KGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQ----- 47 usage_00107.pdb 1 ---RKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYE---------- 42 usage_00109.pdb 1 ---IGKRVGDDGKTIEYLVKWTDMSD--ATWEPQDNV-DSTLVLLYQQQQ------- 44 usage_00110.pdb 1 ---RKKRVR--KGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEE--------- 43 R kg EY VKW gw WEPe i D rL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################