################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:52 2021 # Report_file: c_1377_35.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00469.pdb # 2: usage_00758.pdb # 3: usage_00818.pdb # 4: usage_00819.pdb # 5: usage_00820.pdb # 6: usage_00821.pdb # 7: usage_00825.pdb # 8: usage_00826.pdb # 9: usage_00827.pdb # 10: usage_00828.pdb # # Length: 70 # Identity: 2/ 70 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 70 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 70 ( 64.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00469.pdb 1 SAAAYHRLAASLRDTLMALVWEAHHVAKP-----EGV------ALATYLAMRPHTVF--- 46 usage_00758.pdb 1 ----------------VRRVALVTFNSAA-HNKPSLIRDLLDTVLPHLYNETK------- 36 usage_00818.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00819.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00820.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00821.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00825.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00826.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00827.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 usage_00828.pdb 1 TAGQTARWVDALREYFFSVVWEAAHRRAGT-----VP------DLNDYTLMRLYDGATSV 49 Vwea h a L y mr usage_00469.pdb ---------- usage_00758.pdb ---------- usage_00818.pdb 50 VL-------- 51 usage_00819.pdb 50 VL-------- 51 usage_00820.pdb 50 VL-------- 51 usage_00821.pdb 50 VLPMLEMGHG 59 usage_00825.pdb 50 VL-------- 51 usage_00826.pdb 50 VL-------- 51 usage_00827.pdb 50 VL-------- 51 usage_00828.pdb 50 VL-------- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################