################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:08 2021 # Report_file: c_0375_11.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00008.pdb # 2: usage_00058.pdb # 3: usage_00105.pdb # 4: usage_00181.pdb # # Length: 139 # Identity: 93/139 ( 66.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 132/139 ( 95.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/139 ( 5.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSG-----NAEAIIGNANVAAH 55 usage_00058.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 59 usage_00105.pdb 1 TDFERATIADIFSKLDYEAVGGATLARCLIVYPWTQRYFGNFGNLYNAAAIMGNPMIAKH 60 usage_00181.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 60 DkERsiIsDIFShmDYddiGpkaLsRCLIVYPWTQRhFsg NAeAIiGNanvAaH usage_00008.pdb 56 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 115 usage_00058.pdb 60 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00105.pdb 61 GTTILHGLDRAVKNMDNIKATYAELSVLHSEKLHVDPDNFKLLSDCLTIVVAAQLGKAFS 120 usage_00181.pdb 61 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 GikvLHGLDRgVKNMDNIaATYAdLStLHSEKLHVDPDNFKLLSDCiTIVlAAkmGhAFt usage_00008.pdb 116 AETQGAFQKFLAVVVSAL- 133 usage_00058.pdb 120 AETQGAFQKFLAVVVSALG 138 usage_00105.pdb 121 GEVQAAFQKFLSVVVSALG 139 usage_00181.pdb 121 AETQGAFQKFLAVVVSALG 139 aEtQgAFQKFLaVVVSAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################