################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:14 2021 # Report_file: c_0709_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00151.pdb # 2: usage_00337.pdb # 3: usage_00391.pdb # 4: usage_00591.pdb # 5: usage_00596.pdb # 6: usage_00626.pdb # 7: usage_00646.pdb # 8: usage_00647.pdb # 9: usage_00648.pdb # # Length: 62 # Identity: 26/ 62 ( 41.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 62 ( 67.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 62 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00151.pdb 1 -GSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 59 usage_00337.pdb 1 -GSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 59 usage_00391.pdb 1 -GSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEA 59 usage_00591.pdb 1 ----------GCDILEDGT-IRGYRQSAYDGRDFIALDKDMKTFTAAVPEAVPTKRKWEE 49 usage_00596.pdb 1 -GSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 59 usage_00626.pdb 1 -GSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 59 usage_00646.pdb 1 AGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 60 usage_00647.pdb 1 ---HTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 57 usage_00648.pdb 1 -GSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEA 59 GCDvg D r lRGY Q AYDGkDyIAL eDlrswTAAdmaAq TK KWEa usage_00151.pdb 60 A- 60 usage_00337.pdb 60 AH 61 usage_00391.pdb 60 V- 60 usage_00591.pdb 50 ES 51 usage_00596.pdb 60 AH 61 usage_00626.pdb 60 A- 60 usage_00646.pdb 61 A- 61 usage_00647.pdb 58 AH 59 usage_00648.pdb 60 AH 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################