################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:59 2021 # Report_file: c_1309_69.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00143.pdb # 2: usage_00165.pdb # 3: usage_00185.pdb # 4: usage_00714.pdb # 5: usage_00908.pdb # 6: usage_01175.pdb # 7: usage_01267.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 53 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 53 ( 66.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 -------GPAKDLSFRIRQAWHR-A-NADQ---GE---GDQNEFRLIVDYPLS 38 usage_00165.pdb 1 -------GPLKNLGVKWRNATMR-T-NY------T---NDYDENRLIVSYTLP 35 usage_00185.pdb 1 -------GPLARLNVRLNHASNR-R-SF------N---SDFDQTRLVVSYPLS 35 usage_00714.pdb 1 -------GTLKNLNLKWRNSTMR-R-DF-S--N-----NEFDENRLIISYPLS 36 usage_00908.pdb 1 LPYIEYA--------MKNVTQKNSICPT-CGK--T---ETITQECTV------ 33 usage_01175.pdb 1 -------GTFKGLGFTWKNASFR-S-G------------DQDENRLIVSYTLP 32 usage_01267.pdb 1 -------GPAKDLSLRLRWATHR-G-TG-G---YSAVDNDIDEYRVIVDYPID 40 r r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################