################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:24 2021 # Report_file: c_1370_95.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00053.pdb # 2: usage_00054.pdb # 3: usage_00368.pdb # 4: usage_01069.pdb # 5: usage_01070.pdb # 6: usage_01299.pdb # 7: usage_01407.pdb # # Length: 84 # Identity: 0/ 84 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 84 ( 2.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 71/ 84 ( 84.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 ------FTQP------------------MNAAVNS-------NFI-SHEKRREFLKAFG- 27 usage_00054.pdb 1 --------QP------------------MNAAVNS-------NFI-SHEKRREFLKAFG- 25 usage_00368.pdb 1 ----------------------------KQEEYNDILPNPEN--LDMERYLGLLEYSSR- 29 usage_01069.pdb 1 --------QP------------------MNAAVNS-------NFI-SHEKRREFLKAFG- 25 usage_01070.pdb 1 --------QP------------------MNAAVNS-------NFI-SHEKRREFLKAFG- 25 usage_01299.pdb 1 ----------NPNLRGRTKEEVAATFTQPNAAVNS-------NFI-SHEKRREFLKAFG- 41 usage_01407.pdb 1 TWLESREYTK------------------HLIRVEN------------------WIFRNPG 24 vn usage_00053.pdb 28 -LVDSNGKP-SAAVMAAAQAYKTA 49 usage_00054.pdb 26 -LVDSNGKP-SAAVMAAAQAYKT- 46 usage_00368.pdb 30 ---------PGSSLLAAV------ 38 usage_01069.pdb 26 -LVDSNGKP-SAAVMAAAQAYKT- 46 usage_01070.pdb 26 -LVDSNGKP-SAAVMAAAQAYKT- 46 usage_01299.pdb ------------------------ usage_01407.pdb 25 F---------ALAAAAIAWLL--- 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################