################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:09 2021 # Report_file: c_1442_1010.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_04072.pdb # 2: usage_04236.pdb # 3: usage_04237.pdb # 4: usage_04239.pdb # 5: usage_05841.pdb # 6: usage_09780.pdb # 7: usage_10131.pdb # 8: usage_14972.pdb # 9: usage_14973.pdb # 10: usage_18850.pdb # # Length: 23 # Identity: 5/ 23 ( 21.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 23 ( 69.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 23 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_04072.pdb 1 FLKPRLVDIEQVSSTHAKVTLEP 23 usage_04236.pdb 1 KPRL--VDIEQVSSTHAKVTLE- 20 usage_04237.pdb 1 ------VDIEQVSSTHAKVTLE- 16 usage_04239.pdb 1 ------VDIEQVSSTHAKVTLE- 16 usage_05841.pdb 1 FLKPRLVDIEQVSSTHAKVTLEP 23 usage_09780.pdb 1 --KPRLVDIEQVSSTHAKVTLEP 21 usage_10131.pdb 1 --QCKPPQVTCRSATCAQVNWEV 21 usage_14972.pdb 1 KPRL--VDIEQVSSTHAKVTLE- 20 usage_14973.pdb 1 KPRL--VDIEQVSSTHAKVTLE- 20 usage_18850.pdb 1 FLKPRLVDIEQVSSTHAKVTLEP 23 vdieqvSsThAkVtlE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################