################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:11 2021 # Report_file: c_0721_102.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00121.pdb # 2: usage_00527.pdb # 3: usage_00528.pdb # 4: usage_00620.pdb # # Length: 69 # Identity: 14/ 69 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 69 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 69 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00121.pdb 1 -RMEFICVSSYGLTSSGQVRMLLDTRH--SIEGHHVLIVEDIVDTALTLNYLYHMYFTRR 57 usage_00527.pdb 1 LTMDFIAIS----------ELLKDLRL--PIHGRDVIVVEDIVDTGLTLSYLLDYLEARK 48 usage_00528.pdb 1 LTMDFIAIS----------ELLKDLRL--PIHGRDVIVVEDIVDTGLTLSYLLDYLEARK 48 usage_00620.pdb 1 -TVDFIRLKS------IKV--------IGTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYN 45 tmdFI s i G V VEDIvDTglTl yLl r usage_00121.pdb 58 PASLKTVVL 66 usage_00527.pdb 49 PASVRVAAL 57 usage_00528.pdb 49 PASVRVAAL 57 usage_00620.pdb 46 PKMVKVASL 54 Pasv va L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################