################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:58 2021 # Report_file: c_0260_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00054.pdb # # Length: 124 # Identity: 94/124 ( 75.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/124 ( 86.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/124 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 -QLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI 59 usage_00048.pdb 1 GQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI 60 usage_00049.pdb 1 -QLTKQHVRALAISALAPKPHETLWDI----GSIAIEWLRSTPQTTAVCFEISEERRERI 55 usage_00050.pdb 1 -QLTKQHVRALAISALAPKPHETLWDI---SGSIAIEWLRS--QTTAVCFEISEERRERI 54 usage_00051.pdb 1 GQLTKQHVRALAISALAPKPHETLWDI---GGSIAIEWLRSTPQTTAVCFEISEERRERI 57 usage_00052.pdb 1 --LTKQHVRALAISALAPKPHETLWDI---GGSIAIEWLRSTPQTTAVCFEISEERRERI 55 usage_00053.pdb 1 -QLTKQHVRALAISALAPK--ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI 57 usage_00054.pdb 1 GQLTKQHVRALAISALAPK--ETLWDIG--GGSIAIEWLRSTPQTTAVCFEISEERRERI 56 LTKQHVRALAISALAPK ETLWDI GSIAIEWLRS QTTAVCFEISEERRERI usage_00047.pdb 60 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGLTAPGVFAAAWKRLPV-GGRLVA 118 usage_00048.pdb 61 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG--LTAPGVFAAAWKRLPVGGRLVA 118 usage_00049.pdb 56 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA 115 usage_00050.pdb 55 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA 114 usage_00051.pdb 58 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA 117 usage_00052.pdb 56 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI---LTAPGVFAAAWKRLPVGGRLVA 112 usage_00053.pdb 58 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA 117 usage_00054.pdb 57 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA 116 LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI ltapgvfAAawkrlp GGRLVA usage_00047.pdb 119 NAV- 121 usage_00048.pdb 119 NAVT 122 usage_00049.pdb 116 NAV- 118 usage_00050.pdb 115 NAVT 118 usage_00051.pdb 118 N--- 118 usage_00052.pdb 113 N--- 113 usage_00053.pdb 118 NAV- 120 usage_00054.pdb 117 NAV- 119 N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################