################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:47 2021 # Report_file: c_0970_125.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00211.pdb # 2: usage_00593.pdb # 3: usage_00594.pdb # 4: usage_00620.pdb # 5: usage_00621.pdb # 6: usage_00778.pdb # 7: usage_00779.pdb # 8: usage_01280.pdb # # Length: 64 # Identity: 2/ 64 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 64 ( 10.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 64 ( 42.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00211.pdb 1 GVVLKYQELPNSGPPH-DRRFTFQVIID--GREFPEG--EGRSKKEAKNAAAKLAVEILN 55 usage_00593.pdb 1 TPVYEIVKEGP---SH-KSLFQSTVILD--G-VRYNSLPGFFNRKAAEQSAAEVALRELA 53 usage_00594.pdb 1 --LYQCQKVET--LGR-VTQFTCTVEIG--G-IKYTGA-ATRTKKDAEISAGRTALLAIQ 51 usage_00620.pdb 1 --FYATATSGP---SH-APTFTSTVEFA--G-KVFSGE-EAKTKKLAEMSAAKVAFMSIK 50 usage_00621.pdb 1 LPFYATATSGP---SH-APTFTSTVEFA--G-KVFSGE-EAKTKKLAEMSAAKVAFMSIK 52 usage_00778.pdb 1 IPLYQCQKVET--LGR-VTQFTCTVEIG--G-IKYTGA-ATRTKKDAEISAGRTALLAIQ 53 usage_00779.pdb 1 -----T--QES--GP-AH-RKEFTMTCRVER-FIEIGS--GTSKKLAKRNAAAKMLLR-- 44 usage_01280.pdb 1 -AKFSPAER-T--Y---DGKVRVTVEVV--G-KGKFKG-VGRSYRIAKSAAARRALRSLK 49 tv g k A A a usage_00211.pdb 56 KEK- 58 usage_00593.pdb 54 KS-S 56 usage_00594.pdb 52 S--- 52 usage_00620.pdb 51 N--- 51 usage_00621.pdb 53 NG-- 54 usage_00778.pdb 54 S--- 54 usage_00779.pdb ---- usage_01280.pdb 50 AN-- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################