################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:47:51 2021 # Report_file: c_0560_5.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00033.pdb # 8: usage_00035.pdb # 9: usage_00037.pdb # 10: usage_00138.pdb # 11: usage_00141.pdb # 12: usage_00159.pdb # 13: usage_00176.pdb # 14: usage_00177.pdb # 15: usage_00180.pdb # 16: usage_00181.pdb # 17: usage_00182.pdb # # Length: 109 # Identity: 23/109 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/109 ( 49.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/109 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -----PIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 55 usage_00004.pdb 1 -----PIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 55 usage_00005.pdb 1 -----PIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 55 usage_00006.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 59 usage_00007.pdb 1 -----PIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 55 usage_00008.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMA 59 usage_00033.pdb 1 -----PIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMA 55 usage_00035.pdb 1 -----PIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMA 55 usage_00037.pdb 1 -----PIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMA 55 usage_00138.pdb 1 -----PLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIRCRYNMA 55 usage_00141.pdb 1 -----PLKIEAGILERADGSSYLEFGGNKILVAVYGPREA------P-DRAVIRCRYNMA 48 usage_00159.pdb 1 PTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQA--------LRGRLLCDFRRA 52 usage_00176.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMA 59 usage_00177.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMA 59 usage_00180.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMA 59 usage_00181.pdb 1 -----PIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMA 55 usage_00182.pdb 1 -DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMA 59 P k e L A GS Y E G nK AV GPRe a r rynmA usage_00003.pdb 56 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 102 usage_00004.pdb 56 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 102 usage_00005.pdb 56 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 102 usage_00006.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 usage_00007.pdb 56 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 102 usage_00008.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 usage_00033.pdb 56 PFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEV-- 102 usage_00035.pdb 56 PFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEV-- 102 usage_00037.pdb 56 PFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEV-- 102 usage_00138.pdb 56 PFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVL- 103 usage_00141.pdb 49 PFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLE 97 usage_00159.pdb 53 PFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALL-- 99 usage_00176.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 usage_00177.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 usage_00180.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 usage_00181.pdb 56 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 102 usage_00182.pdb 60 PFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV-- 106 PFsveeRk Pgpdrrs Eisk A e fPR id f ev #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################