################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:43 2021 # Report_file: c_1452_43.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01249.pdb # 2: usage_04090.pdb # 3: usage_04287.pdb # 4: usage_04288.pdb # 5: usage_04393.pdb # 6: usage_04394.pdb # 7: usage_04395.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 43 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 43 ( 67.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01249.pdb 1 AVVHLQGQ--GS----A-IQVKNDLSGGVLNDWSRI------- 29 usage_04090.pdb 1 -VNVIT-KNVK--PSMTN-----------PQGG-QEQRELALH 27 usage_04287.pdb 1 -PLVGL-Q--RLSPRWD-D--------HVRLWA-KL------- 22 usage_04288.pdb 1 -PLVGL-Q--RLSPRWD-DGRD-----GPHVRL-WAK-L---- 27 usage_04393.pdb 1 -PLVGL-Q--RLSPRWD-DGRD-----GPHVRL-WAK-L---- 27 usage_04394.pdb 1 -PLVGL-Q--RLSPRWD-DGRD-----GPHVRL-WAK-L---- 27 usage_04395.pdb 1 -PLVGL-Q--RLSPRWD-DGRD-----GPHVRL-WAK-L---- 27 v q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################