################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:05 2021 # Report_file: c_0055_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00239.pdb # 2: usage_00314.pdb # 3: usage_00331.pdb # 4: usage_00364.pdb # 5: usage_00365.pdb # # Length: 216 # Identity: 21/216 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/216 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/216 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 -VRAIVANYRTLAQHVAPTECSAVV-ANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQL 58 usage_00314.pdb 1 NLNNLEHNVNTLQKASPKCEL-AVVKAEAYGHG-YEVTTYLEQIGVSSFAVATIDEGIRL 58 usage_00331.pdb 1 -RRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLP---ADAFGVARLEEALRL 56 usage_00364.pdb 1 -LGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALAL 59 usage_00365.pdb 1 -LGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALAL 59 a hN L AVV A YGhG a VA Eal L usage_00239.pdb 59 KAVLP-ENVMIALLNGFPH--KAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAII 115 usage_00314.pdb 59 RKYG-IS-SEILILG-YTSP-SRAKELCKYELTQTLIDYRYSLLLNKQ--G--YDIKAHI 110 usage_00331.pdb 57 RAGG-IT-KPVLLLE-GFFDARDLPTISAQHFHTAVHNEEQLAALEEA--S-DEPVTVWM 110 usage_00364.pdb 60 RADG-IT-APVLAWL-HPPG-IDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 115 usage_00365.pdb 60 RADG-IT-APVLAWL-HPPG-IDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 115 ra g l l usage_00239.pdb 116 QVDTNMSRLGLDKKELQKLIKN-PTIF--EKAE-IKYILSHLANGEDA----SHSSNNKQ 167 usage_00314.pdb 111 KIDTG-HRLGFSTED-KDKILAAFSL---KHIK-VAGIFTHLCAADSLEEND-VAFTNKQ 163 usage_00331.pdb 111 KLDTGMHRLGVRPEQAEAFYHRLTQC---KNVRQPVNIVSHFARADEP-----CGATEKQ 162 usage_00364.pdb 116 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVR-LRGLMSHM-----P----DDSINDVQ 165 usage_00365.pdb 116 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVR-LRGLMSHMVYADKP----DDSINDVQ 170 k DTg R G sH Q usage_00239.pdb 168 LAAFKRVLAQL----P--TCKVSFANSGGIFLG--- 194 usage_00314.pdb 164 IGSFYKVLDWLKSSGL-NIPKVHIQSSYGLLNYP-- 196 usage_00331.pdb 163 LAIFNTFCE-------GKPGQRSIAASGGILL---- 187 usage_00364.pdb 166 AQRFTAFLAQAREQGV-RFEVAHLSNSSATMARPDL 200 usage_00365.pdb 171 AQRFTAFLAQAREQGV-RFEVAHLSNSSATMARPDL 205 F l S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################