################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:58 2021 # Report_file: c_0547_18.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00050.pdb # 4: usage_00234.pdb # # Length: 149 # Identity: 40/149 ( 26.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/149 ( 75.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/149 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --------------IEPNKNEIGLLFYANLFKEEPTVSVLFQN----------------P 30 usage_00011.pdb 1 ------------KRIEPNKNEIGLLFYANLFKEEPTVSVLFQN----------------P 32 usage_00050.pdb 1 DQKEKELIKESWKRIEPNKNEIGLLFYANLFKEEPTVSVLFQN----------------P 44 usage_00234.pdb 1 ----PELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQ-YNCRQFSSPEDCLSSPE 55 iepnknEiGllfyAnLFkeEPtvsvLFQ p usage_00010.pdb 31 ISSQSRKLMQVLGILVQGIDNLEGLIPTLQDLGRRHKQYGVVDSHYPLVGDCLLKSIQEY 90 usage_00011.pdb 33 ISSQSRKLMQVLGILVQGIDNLEGLIPTLQDLGRRHKQYGVVDSHYPLVGDCLLKSIQEY 92 usage_00050.pdb 45 ISSQSRKLMQVLGILVQGIDNLEGLIPTLQDLGRRHKQYGVVDSHYPLVGDCLLKSIQEY 104 usage_00234.pdb 56 FLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKC 115 issqsRKlMqVlgilVqgidnLegLiptLqdLGRrHkqyGVvdShyplVGdcLLksiqey usage_00010.pdb 91 LGQGFTEEAKAAWTKVYGIAAQVM----- 114 usage_00011.pdb 93 LGQGFTEEAKAAWTKVYGIAAQVM----- 116 usage_00050.pdb 105 LGQGFTEEAKAAWTKVYGIAAQVMTA--- 130 usage_00234.pdb 116 LGPAFTPATRAAWSQLYGAVVQAMSRGWD 144 LGqgFTeeakAAWtkvYGiaaQvM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################