################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:10 2021 # Report_file: c_1338_98.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00551.pdb # 4: usage_00640.pdb # 5: usage_00641.pdb # 6: usage_00660.pdb # 7: usage_00805.pdb # 8: usage_00814.pdb # 9: usage_00822.pdb # 10: usage_00906.pdb # 11: usage_00907.pdb # # Length: 29 # Identity: 2/ 29 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 29 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 29 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 NHEKYDN-SLKIISNASCTTNC-----L- 22 usage_00040.pdb 1 NHEKYDN-SLKIISNASCTTNC-----L- 22 usage_00551.pdb 1 NHTTYKG--EAIVSNASCTTNC-----L- 21 usage_00640.pdb 1 NNTEYDPSKFNVISNASSTTNC-----L- 23 usage_00641.pdb 1 NNTEYDPSKFNVISNASSTTNC-----L- 23 usage_00660.pdb 1 NNTEYDPSKFNVISNASCTTNC-----L- 23 usage_00805.pdb 1 NEDKYTS-DIDIVSNASCTTNC-----L- 22 usage_00814.pdb 1 PKFRPLP--GRLNVVLSSTLT-TQHLLDG 26 usage_00822.pdb 1 NNTMYKG--QEIVSNASCTTNC-----L- 21 usage_00906.pdb 1 NENDYNPGSMNIVSNASCTTNC-----L- 23 usage_00907.pdb 1 NENDYNPGSMNIVSNASCTTNC-----L- 23 n y snaS Ttn l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################