################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:32 2021 # Report_file: c_1237_42.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00387.pdb # 4: usage_00434.pdb # 5: usage_00549.pdb # 6: usage_00550.pdb # 7: usage_00551.pdb # 8: usage_00578.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 33 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 33 ( 54.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 --------GQILRSSFGKQYMLRRPALEDYVVL 25 usage_00021.pdb 1 ----------GQILRS--QYMLRRPALEDYVVL 21 usage_00387.pdb 1 EPVAGQDATHALIQI----SSVMDYLPVG---- 25 usage_00434.pdb 1 ---------CRVVTCKTCKYTHFKPKETCVSEN 24 usage_00549.pdb 1 ---------EAIKSHKGHEFKILRPRIVDYLDK 24 usage_00550.pdb 1 ---------EAIKSHKGHEFKILRPRIVDYLDK 24 usage_00551.pdb 1 ---------EAIKSHKGHEFKILRPRIVDYLDK 24 usage_00578.pdb 1 ---------EAIKSHKGHEFKILRPRIVDYLDK 24 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################