################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:37 2021 # Report_file: c_1171_168.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00139.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00787.pdb # 6: usage_01528.pdb # 7: usage_01529.pdb # 8: usage_01577.pdb # # Length: 22 # Identity: 0/ 22 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 22 ( 31.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 22 ( 40.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 T---RGRVIQVG-PV-VDVK-- 15 usage_00218.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 usage_00219.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 usage_00220.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 usage_00787.pdb 1 -TGGLSHQVHG-ERAGFNNT-- 18 usage_01528.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 usage_01529.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 usage_01577.pdb 1 N---KGRIIQVM-GPVVDIQFE 18 gr iqv vd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################