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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:00:48 2021
# Report_file: c_0398_34.html
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#====================================
# Aligned_structures: 5
#   1: usage_00099.pdb
#   2: usage_00617.pdb
#   3: usage_00619.pdb
#   4: usage_00700.pdb
#   5: usage_00701.pdb
#
# Length:        147
# Identity:       80/147 ( 54.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     80/147 ( 54.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           60/147 ( 40.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00099.pdb         1  ------------------------------RGKLQLTVTQQLGRTSTLYLSGSHQTYWGT   30
usage_00617.pdb         1  ------------------------------RGKLQLTVTQQLGRTSTLYLSGSHQTYWGT   30
usage_00619.pdb         1  --------------------------AYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGT   34
usage_00700.pdb         1  -------------------------------GKLQLTVTQQLGRTSTLYLSGSHQTYWGT   29
usage_00701.pdb         1  VGYRYSTSGYFNFADTTYSRMNYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGT   60
                                                          GKLQLTVTQQLGRTSTLYLSGSHQTYWGT

usage_00099.pdb        31  SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR   90
usage_00617.pdb        31  SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF-------------   77
usage_00619.pdb        35  SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF-------------   81
usage_00700.pdb        30  SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR   89
usage_00701.pdb        61  SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR  120
                           SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF             

usage_00099.pdb        91  -HASASYSMSHDLNGRMTNLAGVYGT-  115
usage_00617.pdb        78  ASASYSMSHDLNGRMTNLAG------V   98
usage_00619.pdb        82  ASASYSMSHDLNGRMTNLA--------  100
usage_00700.pdb        90  -HASASYSMSHDLNGRMTNLAGVYGT-  114
usage_00701.pdb       121  -HASASYSMSHD---------------  131
                             AS S S                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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