################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:40 2021 # Report_file: c_1070_24.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00310.pdb # 2: usage_00361.pdb # 3: usage_00569.pdb # 4: usage_00772.pdb # 5: usage_00773.pdb # # Length: 89 # Identity: 3/ 89 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 89 ( 20.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 89 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00310.pdb 1 EQPIAALHRDEWLRPE-----D-LPIKYAGLSTCFRQEVGSTRGIFRVHQFEKIEQFVYS 54 usage_00361.pdb 1 TAGCVRAGIEH-----GL--LYNQEQRLWYIGPMFRHERPQ---KGRYRQFHQLGCEVFG 50 usage_00569.pdb 1 APNLYTLWREL-----E-RLWD-KPIRIFEIGTCYRKESQG---AQHLNEFTMLNLTELG 50 usage_00772.pdb 1 APNLYTLWREL-----E-RLWD-KPIRIFEIGTCYRKESQG---AQHLNEFTMLNLTELG 50 usage_00773.pdb 1 APNLYTLWREL-----E-RLWD-KPIRIFEIGTCYRKESQG---AQHLNEFTMLNLTELG 50 l re d pir igtc R E F l g usage_00310.pdb 55 -SPHDNK--SWEMFEEMITTAEEFYQSLG 80 usage_00361.pdb 51 -------LQGPDIDAELIMLTARWWRALG 72 usage_00569.pdb 51 TP-L-EE--RHQRLEDMAR---------- 65 usage_00772.pdb 51 TP-L-EE--RHQRLEDMARWVLEAAG--- 72 usage_00773.pdb 51 TP-L-EE--RHQRLEDMARWVLEAAG--- 72 e m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################