################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:46 2021 # Report_file: c_0362_42.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00027.pdb # 2: usage_00197.pdb # 3: usage_00444.pdb # # Length: 235 # Identity: 55/235 ( 23.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 172/235 ( 73.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/235 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 --SYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNK-AA 57 usage_00197.pdb 1 -LSYIKQLGVTHVQLMPVQDFEGV-DELQ--PLKMY-NWGYNTVHYNAPEGSYATDPDDP 55 usage_00444.pdb 1 GLSYIKQLGVTHVQLMPVQDFEGV-DELQ--PLKMY-NWGYNTVHYNAPEGSYATDPDDP 56 SYikqLGVThVqlmPVQdfegv delq plkmy nWGYnTvhYnaPegsYAtdp dp usage_00027.pdb 58 GGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYEL 117 usage_00197.pdb 56 YARIIELKRAIRAFQQEGIRVILDVVYNHVYVR-----------ETSSFEHLVPGYYFRY 104 usage_00444.pdb 57 YARIIELKRAIRAFQQEGIRVILDVVYNHVYVR-----------ETSSFEHLVPGYYFRY 105 yariiElkrairAFqqeGIrVilDVVYNHvyvr etsSfehLvpgyYfry usage_00027.pdb 118 TSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGA 177 usage_00197.pdb 105 ERN-GYPSNGTGVGNDLASERKMVKKFIIDSVTYWLKEYGVDGFRFDLMGILD------- 156 usage_00444.pdb 106 ERN-GYPSNGTGVGNDLASERKMVKKFIIDSVTYWLKEYGVDGFRFDLMGILD------- 157 ern gYpsngTGvGndlaserkmvkkfIiDSvtYWlkeyGVDGFRFDLmgiLd usage_00027.pdb 178 YTASAPNCPNGGYNFDAADSN-VAINRILREFTVRPAAGGS----GLDLFAE--- 224 usage_00197.pdb 157 ---------------------IDTMNDVRRAID--------EIDPTVIILGEGWD 182 usage_00444.pdb 158 ---------------------IDTMNDVRRAID--------EIDPTVIILGE--- 180 dtmNdvrRaid tviilgE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################