################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:20 2021 # Report_file: c_1489_76.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00481.pdb # 2: usage_00482.pdb # 3: usage_00483.pdb # 4: usage_02308.pdb # 5: usage_02889.pdb # # Length: 68 # Identity: 20/ 68 ( 29.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 68 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 68 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00481.pdb 1 TEEEYKAMVLQKTGGLFGLAVGLMQLFSD-YKE---------DLKPLLNTLGLFFQIRDD 50 usage_00482.pdb 1 TEEEYKAMVLQKTGGLFGLAVGLMQLFSD-YKE---------DLKPLLNTLGLFFQIRDD 50 usage_00483.pdb 1 TEEEYKAMVLQKTGGLFGLAVGLMQLFSD-YKE---------DLKPLLNTLGLFFQIRDD 50 usage_02308.pdb 1 -QEMYLNMVMNKTGGLFRLTLRLMEALSPSHGH---------SLVPFINLLGIIYQIRDD 50 usage_02889.pdb 1 SEEEYYRMIDQKTGQLFSIATSLLLNAADN---EIPRTKIQSCLHRLTRLLGRCFQIRDD 57 eEeY Mv qKTGgLF la Lm sd L pl n LG fQIRDD usage_00481.pdb 51 YANLHS-- 56 usage_00482.pdb 51 YANLHS-- 56 usage_00483.pdb 51 YANLHS-- 56 usage_02308.pdb 51 YLNLKDFQ 58 usage_02889.pdb 58 YQNLV--- 62 Y NL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################