################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:25 2021 # Report_file: c_1131_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00132.pdb # 4: usage_00279.pdb # 5: usage_00514.pdb # 6: usage_00515.pdb # # Length: 144 # Identity: 15/144 ( 10.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/144 ( 31.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/144 ( 20.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 AKMVTRA---IKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQA 57 usage_00015.pdb 1 --MVTRA---IKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQA 55 usage_00132.pdb 1 ---HPMLSKLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQILLEKDYDEYL 57 usage_00279.pdb 1 ---SKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSENLREIV 57 usage_00514.pdb 1 -KMVTRA---IKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQA 56 usage_00515.pdb 1 AKMVTRA---IKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQA 57 i s Q VE NF RK l yD V qQR viY R il enl usage_00014.pdb 58 LDMVRDVITAYVDGATGEGYAE-DWDLDALWTALKTLYP-V--GITADSL-T----REEL 108 usage_00015.pdb 56 LDMVRDVITAYVDGATGEGYAE-DWDLDALWTALKTLYP-V--GITADSL-T-----EEL 105 usage_00132.pdb 58 KDIFEDVVSTRVEEFCSG---K-NWDIESLKNSLSFFPA--GLFDLDEKQF--SSS-EEL 108 usage_00279.pdb 58 ENMIKSSLERAIAAYTPR---EEWK-LDGLVDLINTTYLDEG-ALEKSDI-FGKEP-DEM 110 usage_00514.pdb 57 LDMVRDVITAYVDGATGEGYAE-DWDLDALWTALKTLYP-V--GITADSL-T-------L 104 usage_00515.pdb 58 LDMVRDVITAYVDGATGEGYAE-DWDLDALWTALKTLYP-V--GITADSL-T-------L 105 dm dv v t e w ld L l t y l usage_00014.pdb 109 LEALLKDAERAYAAREAELEEI-- 130 usage_00015.pdb 106 LEALLKDAERAYAAREAELEEIA- 128 usage_00132.pdb 109 HDYLFNRLWEEYQRKKQEIG---- 128 usage_00279.pdb 111 LELIMDRIITKYNEKEEQF----- 129 usage_00514.pdb 105 LEALLKDAERAYAAREAELEEIAG 128 usage_00515.pdb 106 LEALLKDAERAYAAREAELEEI-- 127 le l Y e e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################