################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:33 2021 # Report_file: c_0398_110.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00779.pdb # 2: usage_00780.pdb # 3: usage_00782.pdb # 4: usage_00784.pdb # # Length: 244 # Identity: 10/244 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/244 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 176/244 ( 72.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00779.pdb 1 VSFTKYYNDSHHLSWLGGTWG-GIEGFTSSLYAAELQ----------------------- 36 usage_00780.pdb 1 --------DSHHLSWLGGTWG-GIEGFTSSLYAAELQ----------------------- 28 usage_00782.pdb 1 -------------------------------YAAELQ----------------------- 6 usage_00784.pdb 1 --------GRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYS 52 yaaelq usage_00779.pdb 37 -----NVWKQYYADVDYTYEI---DDNWSLNPGAHYYKTV--------------DSGDSL 74 usage_00780.pdb 29 -----NVWKQYYADVDYTYEI---DDNWSLNPGAHYYKTV--------------DSGDSL 66 usage_00782.pdb 7 -----NVWKQYYADVDYTYEI---DDNWSLNPGAHYYKTV--------------DSGDSL 44 usage_00784.pdb 53 DFNGPN-EKSWKLQYDYDFV-ALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSAD-- 108 N wKqyyadvDYtye ddnwSlnpgahyyKtv dSgD usage_00779.pdb 75 LGR-IDNNTYSLHFAVGYR---------QHTVTAVLQKVNG------------------- 105 usage_00780.pdb 67 LGR-IDNNTYSLHFAVGYR---------QHTVTAVLQKVNG------------------- 97 usage_00782.pdb 45 LGR-IDNNTYSLHFAVGYR---------QHTVTAVLQKVNG------------------- 75 usage_00784.pdb 109 ---GKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYP 165 idnntyslhfavgYr qhtvtavlqkvnG usage_00779.pdb ------------------------------------------------------------ usage_00780.pdb 98 --NTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYD------------------- 136 usage_00782.pdb 76 --NTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGK 133 usage_00784.pdb 166 ID---------------------------------------------------------- 167 usage_00779.pdb ---- usage_00780.pdb ---- usage_00782.pdb 134 LDLT 137 usage_00784.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################