################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:44 2021 # Report_file: c_0300_11.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00108.pdb # 2: usage_00172.pdb # 3: usage_00234.pdb # 4: usage_00294.pdb # 5: usage_00443.pdb # 6: usage_00448.pdb # 7: usage_00449.pdb # 8: usage_00450.pdb # 9: usage_00451.pdb # 10: usage_00452.pdb # 11: usage_00453.pdb # 12: usage_00454.pdb # 13: usage_00471.pdb # 14: usage_00483.pdb # 15: usage_00542.pdb # # Length: 158 # Identity: 3/158 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/158 ( 6.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/158 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 STAIVTNVKH--FGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYP-------QL 50 usage_00172.pdb 1 -VVVITGSST--GLGKSMAIRFATEKA-KVVVNYR--SKEDEANSVLEEIKKV-GG--EA 51 usage_00234.pdb 1 RTAFVTGGAN--GVGIGLVRQLLNQGC-KVAIADI---RQDSIDKALATLEAE-GSGPEV 53 usage_00294.pdb 1 -PVLVTGGAR--RIGKAIVEDLASHGF-PVAIHCN--RSLDEGEAIANRINDS-GG--NA 51 usage_00443.pdb 1 QVALVTGASR--GIGKATALALAATGM-KVVVNYA--QSSTAADAVVAEIIAN-GG--EA 52 usage_00448.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 51 usage_00449.pdb 1 -TAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 50 usage_00450.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 51 usage_00451.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 51 usage_00452.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 51 usage_00453.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVA-----------KA 43 usage_00454.pdb 1 KTAVVTGAAS--GIGKEIALELAKAGA-AVAIADL---NQDGANAVADEINKA-GG--KA 51 usage_00471.pdb 1 KIAIVTGAGS--GVGRAVAVALAGAGY-GVALAGR---RLDALQETAAEIG----D--DA 48 usage_00483.pdb 1 -NAVVTGGAG--GIGLQVSKQLLAAGAAKVAIIDLQ-DNLEEFVKLRAAHP---TQ--SV 51 usage_00542.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYA--SRAQGAEENVKELEKTYGI--KA 55 vTg G g V usage_00108.pdb 51 KPMSEQ-------EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEAL 103 usage_00172.pdb 52 IAVKG-DVTVESDV-INLVQSAIKEFGKLDVMINNAGLANPV-SSHEMSLSDWNKVIDTN 108 usage_00234.pdb 54 MGVQL-DVASREGF-KMAADEVEARFGPVSILCNNAGVNLFQ-PIEESSYDDWDWLLGVN 110 usage_00294.pdb 52 CVVQA-DLEGD--V-RGLVKQASDRIGPIRLLVNNASLFQED-KVGALDMALWDRHFAVH 106 usage_00443.pdb 53 IAVQA-NVANADEV-DQLIKTTLDKFSRIDVLVNNAGITRDT-LLLRMKLEDWQAVIDLN 109 usage_00448.pdb 52 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 108 usage_00449.pdb 51 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 107 usage_00450.pdb 52 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 108 usage_00451.pdb 52 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 108 usage_00452.pdb 52 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 108 usage_00453.pdb 44 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 100 usage_00454.pdb 52 IGVAM-DVTNEEAV-NTGIDKVAEAFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIH 108 usage_00471.pdb 49 LCVPT-DVTDPDSV-RALFTATVEKFGRVDVLFNNAGTGAPA-IPEDLTFAQWKQVVDTN 105 usage_00483.pdb 52 MIIKM-DVANKKGV-EATYEEIAKTFGNIDIVVNVAGIFNDK---------DVQRTLLVN 100 usage_00542.pdb 56 KAYKC-QVDSYESC-EKLVKDVVADFGQIDAFIANAGATADS-GILDGSVEAWNHVVQVD 112 g na usage_00108.pdb 104 QIRPFALVNAVASQMKK-R-K-----SG-HIIFITSAT 133 usage_00172.pdb 109 LTGAFLGSREAIKYFVE-N-D-----IKGTVINM---- 135 usage_00234.pdb 111 LHGVVNGVTTFVPRMVE-R-VKAGEQKGGHVVNT---- 142 usage_00294.pdb 107 LKTPVILAEDMRKALPE-D-Q-----DG-LVVNIID-- 134 usage_00443.pdb 110 LTGVFLCTKAVSKLMLK-Q-K-----SG-RIIN----- 134 usage_00448.pdb 109 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 138 usage_00449.pdb 108 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 137 usage_00450.pdb 109 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 138 usage_00451.pdb 109 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 138 usage_00452.pdb 109 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 138 usage_00453.pdb 101 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 130 usage_00454.pdb 109 VDGAFLTTKAALKHMYK-D-D-----RGGVVIYMGSV- 138 usage_00471.pdb 106 LTGPFLCTQEAFRVKAQ-E-P-----RGGRIINN---- 132 usage_00483.pdb 101 LGGIINSTLSALPYMGKDNGG---K-GG-IVVNM---- 129 usage_00542.pdb 113 LNGTFHCAKAVGHHFKE-R-G-----TG-SLVIT---- 138 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################