################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:00 2021 # Report_file: c_1172_264.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00097.pdb # 2: usage_00985.pdb # 3: usage_01021.pdb # 4: usage_01025.pdb # 5: usage_01215.pdb # 6: usage_01661.pdb # 7: usage_01835.pdb # 8: usage_02087.pdb # 9: usage_02211.pdb # 10: usage_02501.pdb # 11: usage_02545.pdb # 12: usage_02714.pdb # 13: usage_02890.pdb # 14: usage_03383.pdb # 15: usage_03384.pdb # 16: usage_03996.pdb # 17: usage_03997.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 57 ( 89.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 SALRGGRD---LDGNGYPDLIVGSF------G---VDKAVVYR--G----------- 32 usage_00985.pdb 1 -GGLHHKDP---SDAAH-------------------PWNTHLIIDSDGVTRAEYN-- 32 usage_01021.pdb 1 ----------------FTMEFEVTV------TRDGFHKRTISV--DNGRPVVVWD-- 31 usage_01025.pdb 1 GVFSIMERN--PDSNKN-------------------PYNTAIIIDPQGEIILKYR-- 34 usage_01215.pdb 1 FSLRGAVD---IDDNGYPDLIVGAY------G---ANQVAVYR--A---------QP 34 usage_01661.pdb 1 YSMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 31 usage_01835.pdb 1 YSMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 31 usage_02087.pdb 1 YSMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 31 usage_02211.pdb 1 -SMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 30 usage_02501.pdb 1 YSMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 31 usage_02545.pdb 1 -SMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 30 usage_02714.pdb 1 -SMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 30 usage_02890.pdb 1 ---------GATDLDV--ANFYVSQLQTPIGV---QAEALLR--------------- 28 usage_03383.pdb 1 QALSGGQD---LTQDGLVDLAVGAR-----------GQVLLLR-------------- 29 usage_03384.pdb 1 QALSGGQD---LTQDGLVDLAVGAR-----------GQVLLLR-------------- 29 usage_03996.pdb 1 -SMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 30 usage_03997.pdb 1 -SMKGATD---IDKNGYPDLIVGAF------G---VDRAILYR-------------- 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################