################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:26 2021 # Report_file: c_0864_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00194.pdb # 4: usage_00335.pdb # 5: usage_00336.pdb # 6: usage_00581.pdb # 7: usage_00653.pdb # # Length: 81 # Identity: 0/ 81 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 81 ( 23.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 81 ( 53.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 RV-------PALIENGELEKAVGLPMDKE--TSHVMLC-G-N-P----QMVRDTQQLLKE 44 usage_00109.pdb 1 -V-------PALIENGELEKAVGLPMDKE--TSHVMLC-G-N-P----QMVRDTQQLLKE 43 usage_00194.pdb 1 -I-------PALIESGELESTIGLPMNKE--TSHVMLC-G-N-P----QMVRDTQQLLKE 43 usage_00335.pdb 1 -I-------PALIESGELESTIGLPMNKE--TSHVMLC-G-N-P----QMVRDTQQLLKE 43 usage_00336.pdb 1 -I-------PALIESGELESTIGLPMNKE--TSHVMLC-G-N-P----QMVRDTQQLLKE 43 usage_00581.pdb 1 -I-------PELLKNNSIEQALHTKLTPE--STRFMIC-G-N-P----EMVKDTFQTLLD 43 usage_00653.pdb 1 --YLDSFEKTSNIFFT-------------ENVKHLYLDLECREWKGTETKTLAFAKHVRE 45 p li h mlc g n p mv dt q l e usage_00108.pdb 45 TRQMTKHLRRRPGHMTAEHYW 65 usage_00109.pdb 44 TRQMTKHLRRRPGHMTAEHYW 64 usage_00194.pdb 44 TRQMTKHLRRRPGHMTAEHYW 64 usage_00335.pdb 44 TRQMTKHLRRRPGHMTAEHY- 63 usage_00336.pdb 44 TRQMTKH-----GHMTAEHY- 58 usage_00581.pdb 44 M-GYAMHRNRIPGQIMMENGF 63 usage_00653.pdb 46 QYPH----------VTIGNVY 56 t e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################