################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:16 2021 # Report_file: c_0385_35.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00004.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00117.pdb # 5: usage_00154.pdb # 6: usage_00155.pdb # 7: usage_00156.pdb # 8: usage_00157.pdb # 9: usage_00175.pdb # 10: usage_00176.pdb # 11: usage_00184.pdb # 12: usage_00185.pdb # 13: usage_00186.pdb # 14: usage_00216.pdb # 15: usage_00238.pdb # 16: usage_00239.pdb # 17: usage_00240.pdb # 18: usage_00241.pdb # 19: usage_00319.pdb # 20: usage_00337.pdb # 21: usage_00376.pdb # 22: usage_00547.pdb # # Length: 87 # Identity: 21/ 87 ( 24.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 87 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 87 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ------GPDLVKPGASVKISCK--ASGYSFSTYYMHWVKQSHGKSLEWIGRVDPDNGGTS 52 usage_00027.pdb 1 -------PELVKPGASVKISCK--DSGYAFNSSWMNWVKQRPGQGLEWIGRIYPGDGDSN 51 usage_00028.pdb 1 -------PELVKPGASVKISCK--DSGYAFNSSWMNWVKQRPGQGLEWIGRIYPGDGDSN 51 usage_00117.pdb 1 -QLQQSGAELVKPGASVKLSCK--ASDYTFTSYWMHWVKQRPGQGLEWIGEINPTNGRTY 57 usage_00154.pdb 1 ------GTELVRPGASVILSCK--ASGYTFTSYWINWVKQRPGQGLEWVGNIFPSDSYTN 52 usage_00155.pdb 1 ------GTELVRPGASVILSCK--ASGYTFTSYWINWVKQRPGQGLEWVGNIFPSDSYTN 52 usage_00156.pdb 1 ------GTELVRPGASVILSCK--ASGYTFTSYWINWVKQRPGQGLEWVGNIFPSDSYTN 52 usage_00157.pdb 1 ------GTELVRPGASVILSCK--ASGYTFTSYWINWVKQRPGQGLEWVGNIFPSDSYTN 52 usage_00175.pdb 1 ------GSELVRPGASVKLSCK--ASGYTFTSYWINWVKQRPGQGLEWIGNIYPGSGRTN 52 usage_00176.pdb 1 ------GSELVRPGASVKLSCK--ASGYTFTSYWINWVKQRPGQGLEWIGNIYPGSGRTN 52 usage_00184.pdb 1 ------GGELVRPGASVKLSCK--ASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTN 52 usage_00185.pdb 1 ------GGELVRPGASVKLSCK--ASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTN 52 usage_00186.pdb 1 ------GGELVRPGASVKLSCK--ASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTN 52 usage_00216.pdb 1 ------GAELVKPGASVKLSCK--ASGYTFTSYWMQWVKQRPGQGLEWIGEIDPSDSYTN 52 usage_00238.pdb 1 ------GAELARPGASVKLSCK--ASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTR 52 usage_00239.pdb 1 ------GAELARPGASVKLSCK--ASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTR 52 usage_00240.pdb 1 ------GAELARPGASVKLSCK--ASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTR 52 usage_00241.pdb 1 ------GAELARPGASVKLSCK--ASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTR 52 usage_00319.pdb 1 --------ELVTPGASVKMSCTFS------S-YNIHWVKQTPGQGLEWIGVIYPGNGDTS 45 usage_00337.pdb 1 VQLQQSGAELVRAGSSVKMSCK--ASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTK 58 usage_00376.pdb 1 ------GPELVKPGASVKISCK--ASGYAFISSWMNWVKQRPGKGLEWIGRIYPGDGDTH 52 usage_00547.pdb 1 ------GAELVRAGSSVKMSCK--ASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTK 52 eL G SV SCk WVKQ pG gLEW G i P usage_00004.pdb 53 FNQ-KFKGKAILTVDKSSSTAYMELGS 78 usage_00027.pdb 52 YNG-KFEGKAILTADKSSSTAYMQ--- 74 usage_00028.pdb 52 YNG-KFEGKAILTADKSSSTAYMQ--- 74 usage_00117.pdb 58 YNEK----KATLTVAASASTAAMQAS- 79 usage_00154.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQVNS 78 usage_00155.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQVNS 78 usage_00156.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQVNS 78 usage_00157.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQVNS 78 usage_00175.pdb 53 YDE-KFKNKATLTVDTSSSTVYIQVS- 77 usage_00176.pdb 53 YDE-KFKNKATLTVDTSSSTVYIQVS- 77 usage_00184.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQLS- 77 usage_00185.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQLS- 77 usage_00186.pdb 53 YNQ-KFKDKATLTVDKSSSTAYMQLS- 77 usage_00216.pdb 53 YNQ-KFKGKATLTVDTSSSTAYMQLS- 77 usage_00238.pdb 53 YTQ-KFKGMATLTADKSSSTAYMQLTS 78 usage_00239.pdb 53 YTQ-KFKGMATLTADKSSSTAYMQLTS 78 usage_00240.pdb 53 YTQ-KFKGMATLTADKSSSTAYMQLTS 78 usage_00241.pdb 53 YTQ-KFKGMATLTADKSSSTAYMQLTS 78 usage_00319.pdb 46 YNQ-KFRDKATLTADKSSSTAYMQLSS 71 usage_00337.pdb 59 YNE-KFKGKTTLTVDKSSSTAYMQLRS 84 usage_00376.pdb 53 YNG-KFKGKATLTADKSSSTAYMQLS- 77 usage_00547.pdb 53 YNE-KFKGKTTLTVDKSSSTAYMQLRS 78 y LT d SsST y q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################