################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:42 2021 # Report_file: c_1141_16.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00630.pdb # 2: usage_00743.pdb # 3: usage_00744.pdb # 4: usage_00745.pdb # 5: usage_00855.pdb # 6: usage_00856.pdb # 7: usage_00857.pdb # 8: usage_00858.pdb # 9: usage_00859.pdb # 10: usage_00860.pdb # 11: usage_00861.pdb # # Length: 94 # Identity: 57/ 94 ( 60.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 94 ( 75.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 94 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00630.pdb 1 --FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSTNEFGIFNSLWFSLGAFMQ------PRS 52 usage_00743.pdb 1 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QGADISPRS 55 usage_00744.pdb 1 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QGADISPRS 55 usage_00745.pdb 1 --FSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QGADISPRS 53 usage_00855.pdb 1 -----LDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG--ISPRS 48 usage_00856.pdb 1 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG------S 49 usage_00857.pdb 1 ------DPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG------S 43 usage_00858.pdb 1 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG--ISPRS 53 usage_00859.pdb 1 -VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG--ISPRS 52 usage_00860.pdb 1 -VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG------S 48 usage_00861.pdb 1 ------DPLAYEIWMCIVFAYIGVSVVLFLVS----IFNSLWFSLGAFMQ-QG------S 43 DPLAYEIWMCIVFAYIGVSVVLFLVS ifnslwfslgafmq S usage_00630.pdb 53 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERM 86 usage_00743.pdb 56 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERM 89 usage_00744.pdb 56 LSGRIVGGVWWFFTLIIISSYTANLAAFLT---- 85 usage_00745.pdb 54 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERM 87 usage_00855.pdb 49 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERM 82 usage_00856.pdb 50 LSGRIVGGVWWFFTLIIISSYTANLAAFLTV--- 80 usage_00857.pdb 44 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVER- 76 usage_00858.pdb 54 LSGRIVGGVWWFFTLIIISSYTANLAAFLTV--- 84 usage_00859.pdb 53 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVER- 85 usage_00860.pdb 49 LSGRIVGGVWWFFTLIIISSYTANLAAFLTV--- 79 usage_00861.pdb 44 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVER- 76 LSGRIVGGVWWFFTLIIISSYTANLAAFLT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################