################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:06 2021 # Report_file: c_0925_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00031.pdb # 2: usage_00294.pdb # 3: usage_00388.pdb # 4: usage_00680.pdb # 5: usage_01149.pdb # 6: usage_01238.pdb # 7: usage_01239.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 51 ( 3.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 51 ( 60.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 SISDY--INKWIFVTITNNRL---GNSRIYINGNLI------DEKS----- 35 usage_00294.pdb 1 NISDY--INRWIFVTITNNRL---NNSKIYINGRLI------DQKP----- 35 usage_00388.pdb 1 NISDY--INRWIFVTITNNRL---NNSKIYINGRLI------DQKP----- 35 usage_00680.pdb 1 -------EKYFIGLIYHRE-----E-KRWRWINNSVFNGNVTN---Q-NQ- 33 usage_01149.pdb 1 -----KADVYFMKQFKNSYTNNRHQITSIFLI----------KPLADFKVQ 36 usage_01238.pdb 1 NISDY--INRWIFVTITNNRL---NNSKIYINGRLI------DQKP----- 35 usage_01239.pdb 1 NISDY--INRWIFVTITNNRL---NNSKIYINGRLI------DQKP----- 35 i i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################