################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:22 2021 # Report_file: c_1250_162.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00426.pdb # 4: usage_00558.pdb # 5: usage_00573.pdb # 6: usage_00709.pdb # 7: usage_00755.pdb # 8: usage_01302.pdb # 9: usage_01389.pdb # 10: usage_01390.pdb # 11: usage_01509.pdb # 12: usage_01570.pdb # # Length: 39 # Identity: 5/ 39 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 39 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 39 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 ---VFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVD 36 usage_00017.pdb 1 ---VFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVD 36 usage_00426.pdb 1 -GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLA-VD 37 usage_00558.pdb 1 -VRTITVASGKGGTGKTTITANLGVALAQLGHDVTI-VD 37 usage_00573.pdb 1 -KRIIPVVSGKGGVGKSLVSTTLALVLAEKGYRVGL-LD 37 usage_00709.pdb 1 -TRIISIVSGKGGTGKTTVTANLSVALGE-GRKVLA-VD 36 usage_00755.pdb 1 -KRIIPVVSGKGGVGKSLVSTTLALVLAEKGYRVGL-LD 37 usage_01302.pdb 1 --RTIAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLL-LD 36 usage_01389.pdb 1 --RTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLY-VD 36 usage_01390.pdb 1 --RTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLY-VD 36 usage_01509.pdb 1 --RRIALANQKGGVGKTTTAINLAAYLARLGKRVLL-VD 36 usage_01570.pdb 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLA-VD 38 KGG G D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################