################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:17 2021 # Report_file: c_0937_37.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00304.pdb # 2: usage_00340.pdb # 3: usage_00457.pdb # 4: usage_00512.pdb # 5: usage_00517.pdb # 6: usage_00550.pdb # 7: usage_00551.pdb # 8: usage_01145.pdb # 9: usage_01146.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 39 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 39 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00304.pdb 1 --APFRTS--FGTQSVRELLLLRAVT-P---AGEGWGEC 31 usage_00340.pdb 1 --YTLTFPN-S----TEEIKAYCDMEAG---GGGWTI-I 28 usage_00457.pdb 1 --FEYTFDYQ-----MTPTKVKVHMKKALSGDSYWVF-V 31 usage_00512.pdb 1 GLYFIKPLK-A----NQQFLVYCEID-G---SGNGWT-- 28 usage_00517.pdb 1 GLYFIKPQK-A----KQSFLVYCEID-T---YGNGWT-- 28 usage_00550.pdb 1 --YTLTFPN-S----TEEIKAYCDMEAG---GGGWTI-I 28 usage_00551.pdb 1 --YTLTFPN-S----TEEIKAYCDMEAG---GGGWTI-I 28 usage_01145.pdb 1 GIYTLTFPN-S----TEEIKAYCDMEAG---GGGWTI-I 30 usage_01146.pdb 1 --YTLTFPN-S----TEEIKAYCDMEAG---GGGWTI-I 28 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################