################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:34 2021 # Report_file: c_1291_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00086.pdb # 2: usage_00300.pdb # 3: usage_00341.pdb # 4: usage_00342.pdb # 5: usage_01207.pdb # 6: usage_01426.pdb # # Length: 55 # Identity: 6/ 55 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 55 ( 32.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 55 ( 38.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 TAQAQYDATQHLPLS----QAKA-GDLVFFH-----S--TYNAGSYVTHVGI--- 40 usage_00300.pdb 1 DAYQQEGFTQPITIA----ELVA-GDLVFFG-----TS-Q-----KATHVGLYLA 39 usage_00341.pdb 1 DAYQQEGFTQPITIA----ELVA-GDLVFFG-----TS-Q-----KATHVGLYLA 39 usage_00342.pdb 1 DAYQQEGFTQPITIA----ELVA-GDLVFFG-----TS-Q-----KATHVGLYLA 39 usage_01207.pdb 1 DASQQAYVGERIEIAPDFSNVQRGDLVFFGRKATAD-RKE-----GISHVGI--- 46 usage_01426.pdb 1 DAYQQEAFTQAITID----ELAP-GDLVFFG-----TP-V-----KATHVGLYLG 39 dA qQ tq i i gdlvFf tHVG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################