################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:08 2021 # Report_file: c_1046_38.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00073.pdb # 2: usage_00074.pdb # 3: usage_00075.pdb # 4: usage_00076.pdb # 5: usage_00077.pdb # 6: usage_00078.pdb # 7: usage_00079.pdb # 8: usage_00080.pdb # 9: usage_00081.pdb # 10: usage_00082.pdb # 11: usage_00399.pdb # 12: usage_00400.pdb # 13: usage_00440.pdb # # Length: 48 # Identity: 3/ 48 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 48 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 48 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMM-- 40 usage_00074.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00075.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00076.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00077.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00078.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMM-- 40 usage_00079.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMM-- 40 usage_00080.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00081.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00082.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMMIG 42 usage_00399.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMM-- 40 usage_00400.pdb 1 -YMAVSLPPTFSF-----PEESNRGRIIRDCLLPVAEKHNIPFAMM-- 40 usage_00440.pdb 1 LVVVDFSATWCGPCKMIK---PFFH-----SLSEKYS--NVIFLEVD- 37 ymavslpptfsf snrg cLlpvae NipFamm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################