################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:55 2021 # Report_file: c_1207_17.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00252.pdb # 2: usage_00253.pdb # 3: usage_00281.pdb # 4: usage_00303.pdb # 5: usage_00518.pdb # 6: usage_00536.pdb # 7: usage_00839.pdb # 8: usage_00976.pdb # 9: usage_01236.pdb # 10: usage_01365.pdb # 11: usage_01455.pdb # 12: usage_01456.pdb # 13: usage_01457.pdb # 14: usage_01458.pdb # 15: usage_01459.pdb # # Length: 40 # Identity: 21/ 40 ( 52.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 40 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 40 ( 47.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00252.pdb 1 -IVGRPR-----------KDSYVGDEAQS---ILTLKYPI 25 usage_00253.pdb 1 -IVGRPR-----------KDSYVGDEAQS---ILTLKYPI 25 usage_00281.pdb 1 SIVGRPRHQG----------SYVGDEAQSKRGILTLKYPI 30 usage_00303.pdb 1 --VGRPR-----------KDSYVGDEAQS---ILTLKYPI 24 usage_00518.pdb 1 --VGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 37 usage_00536.pdb 1 --VGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 37 usage_00839.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 39 usage_00976.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 39 usage_01236.pdb 1 --VGRPRHQGVMV--GMQKDSYVGDEAQSKRGILTLKYPI 36 usage_01365.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYP- 38 usage_01455.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYP- 38 usage_01456.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 39 usage_01457.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYPI 39 usage_01458.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYP- 38 usage_01459.pdb 1 SIVGRPRHQGVMVGMG-QKDSYVGDEAQSKRGILTLKYP- 38 VGRPR SYVGDEAQS ILTLKYP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################