################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:04 2021 # Report_file: c_0378_49.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00012.pdb # 2: usage_00039.pdb # 3: usage_00046.pdb # 4: usage_00070.pdb # 5: usage_00124.pdb # 6: usage_00137.pdb # 7: usage_00184.pdb # 8: usage_00698.pdb # 9: usage_00719.pdb # 10: usage_00827.pdb # 11: usage_00872.pdb # 12: usage_00873.pdb # 13: usage_01031.pdb # 14: usage_01049.pdb # # Length: 103 # Identity: 51/103 ( 49.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/103 ( 65.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/103 ( 35.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 ----SVFPLAP-----------TAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 44 usage_00039.pdb 1 ----SVFPLAP---S------GTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 46 usage_00046.pdb 1 ----SVFPLA------------TAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 43 usage_00070.pdb 1 TKGPSVFPLAP-------------ALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 46 usage_00124.pdb 1 ----SVFPLA-----------GTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 44 usage_00137.pdb 1 -KGPSVFPLAP---SS------TAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 49 usage_00184.pdb 1 ----SVFPLAP----------GTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 45 usage_00698.pdb 1 ----SVFPLAP-----------TAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 44 usage_00719.pdb 1 ----SVFPLAP---SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 52 usage_00827.pdb 1 ----SVFPLAPSTS------GGTAALGCLVKDYFPEPVTVSW--NSGALTSSVHTFPAVL 48 usage_00872.pdb 1 ----SVFPLAP---SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 52 usage_00873.pdb 1 ----SVFPLAP---SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 52 usage_01031.pdb 1 ----SVFPLAP---SS----GGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 48 usage_01049.pdb 1 ----SVFPLAP----------GTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQ 45 SVFPLA ALGCLVKDYFPEPVTVSW ga ltsgvhtfpavlq usage_00012.pdb 45 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP 86 usage_00039.pdb 47 SS-GLYSLSSVVTVPSS---TQTYICNVNHKPSNTKVD----- 80 usage_00046.pdb 44 SS-GLYSLSSVVTVPSS----QTYICNVNHKPSNTKVDKK--- 78 usage_00070.pdb 47 SS-GLYSLSSVVTV-P------TYICNVNHKPSNTKVDKRVE- 80 usage_00124.pdb 45 SS-GLYSLSSVVTVPSS---TQTYICNVNHKPSNTKVDK---- 79 usage_00137.pdb 50 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKR--- 88 usage_00184.pdb 46 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD----- 82 usage_00698.pdb 45 SS-GLYSLSSVVT---------TYICNVNHKPSNTKVDKRVEP 77 usage_00719.pdb 53 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP 94 usage_00827.pdb 49 QSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK--- 88 usage_00872.pdb 53 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK---- 90 usage_00873.pdb 53 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD----- 89 usage_01031.pdb 49 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP 90 usage_01049.pdb 46 SS-GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 87 sS GLYSLSSVVT TYICNVNHKPSNTKVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################