################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:44 2021 # Report_file: c_0517_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00042.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00090.pdb # 8: usage_00097.pdb # 9: usage_00098.pdb # # Length: 126 # Identity: 27/126 ( 21.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/126 ( 73.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/126 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 usage_00040.pdb 1 -IPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 57 usage_00041.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 usage_00042.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 usage_00043.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 usage_00044.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 usage_00090.pdb 1 -LPAL-VSSRGSVVFTISNAGFYPN--GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGV 56 usage_00097.pdb 1 AIPYMIRSRDPSIVNISSV--KN------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 52 usage_00098.pdb 1 AIPYMIRSRDPSIVNISSVQASIITKN--ASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 58 iPym rSrdpSiVnisSv asaYvtsKHAViGLtksiAldyAPllRcNaV usage_00039.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 usage_00040.pdb 58 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 107 usage_00041.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 usage_00042.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 usage_00043.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 usage_00044.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 usage_00090.pdb 57 APGGMNTDLRGPSSLGLSE----------QSISSV-PLADMLKSVLPIGRMPALEEYTGA 105 usage_00097.pdb 53 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 102 usage_00098.pdb 59 CPATIDTPL----------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 108 cPatidTpL sdpmri kkisewghehPmqRigkpqEvasA usage_00039.pdb 109 VAFLAS 114 usage_00040.pdb 108 VAFLAS 113 usage_00041.pdb 109 VAFLAS 114 usage_00042.pdb 109 VAFLAS 114 usage_00043.pdb 109 VAFLAS 114 usage_00044.pdb 109 VAFLAS 114 usage_00090.pdb 106 YVFFAT 111 usage_00097.pdb 103 VAFLAS 108 usage_00098.pdb 109 VAFLAS 114 vaFlAs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################