################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:06 2021 # Report_file: c_1488_113.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00286.pdb # 2: usage_00651.pdb # 3: usage_00747.pdb # 4: usage_00903.pdb # 5: usage_01337.pdb # 6: usage_02219.pdb # 7: usage_02220.pdb # 8: usage_03486.pdb # 9: usage_04103.pdb # 10: usage_04104.pdb # 11: usage_04133.pdb # 12: usage_04134.pdb # 13: usage_04286.pdb # 14: usage_05761.pdb # 15: usage_05762.pdb # 16: usage_06198.pdb # 17: usage_06399.pdb # 18: usage_07743.pdb # 19: usage_07909.pdb # # Length: 128 # Identity: 0/128 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/128 ( 7.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 110/128 ( 85.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00286.pdb 1 ---MSQS---NRELVVDFLSYKLSQKGYSW------------------------------ 24 usage_00651.pdb 1 --AMSQS---NRELVVDFLSYKLSQKGYSWS----Q-FS--DVE------EN----RTEA 38 usage_00747.pdb 1 ----------NRELVVDFLSYKLSQKGYSWS----Q-FS--DVE------EN----RTEA 33 usage_00903.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWS----Q-FS--D------------------ 27 usage_01337.pdb 1 ------S---NRELVVDFLSYKLSQKGYSWS--QFS------------------------ 25 usage_02219.pdb 1 SMAMSQS---NRELVVDFLSYKLSQKGYSWS----Q-FS--DVE------EN----RTEA 40 usage_02220.pdb 1 ------D---NREIVMKYIHYKLSQRGYEWD----A---GDDVE------EN----RTEA 34 usage_03486.pdb 1 ----------NREIVMKYIHYKLSQRGYEWD--A-------------------------- 22 usage_04103.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWS----QFS---------------------- 26 usage_04104.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWS----QFS---------------------- 26 usage_04133.pdb 1 ----SQS---NRELVVDFLSYKLSQKGYSWS----QF----------------------- 26 usage_04134.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWS----Q------------------------ 24 usage_04286.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWS----Q-FS--DVEENRTEAPEGTESEMET 45 usage_05761.pdb 1 -----QS---NRELVVDFLSYKLSQKGY-------------------------------- 20 usage_05762.pdb 1 -----QS---NRELVVDFLSYKLSQKGY-------------------------------- 20 usage_06198.pdb 1 ----SQS---NRELVVDFLSYKLSQKGYSWS----QF----------------------- 26 usage_06399.pdb 1 -------SMSQSN----------------------------------------------- 6 usage_07743.pdb 1 -GHMSQS---NRELVVDFLSYKLSQKGYSWS----Q-FS--D------------------ 31 usage_07909.pdb 1 -----QS---NRELVVDFLSYKLSQKGYSWSGH-------------------SSS----L 29 nre usage_00286.pdb 25 ----------P-----------------------------M-AAVKQALREAGDEFELRY 44 usage_00651.pdb 39 P------EGTE-----------------------------S-EAVKQALREAGDEFELRY 62 usage_00747.pdb 34 PE-----G-TE-----------------------------S-EAVKQALREAGDEFELRY 57 usage_00903.pdb 28 ----------E-----------------------------S-EAVKQALREAGDEFELRY 47 usage_01337.pdb 26 ---R-EVI--P-----------------------------M-AAVKQALREAGDEFELR- 48 usage_02219.pdb 41 P-E----G-TE-----------------------------S-EAVKQALREAGDEFELRY 64 usage_02220.pdb 35 P------EGTE-----------------------------S-EVVHLALRQAGDDFSRRY 58 usage_03486.pdb 23 ----------------------------------------S-EVVHLTLRQAGDDFSRR- 40 usage_04103.pdb 27 ---------IP-----------------------------M-AAVKQALREAGDEFEL-- 45 usage_04104.pdb 27 ---------IP-----------------------------M-AAVKQALREAGDEFEL-- 45 usage_04133.pdb 27 ---------TE-----------------------------S-EAVKQALREAGDEFEL-- 45 usage_04134.pdb 25 ---------TE-----------------------------S-EAVKQALREAGDEFEL-- 43 usage_04286.pdb 46 PSAI-NGN----PSWHLADSPAVNGATGHSSSLDAREVIPM-AAVKQALREAGDEFELRY 99 usage_05761.pdb 21 ----------G-----------------------------M-AAVKQALREAGDEFELRY 40 usage_05762.pdb 21 ----------G-----------------------------M-AAVKQALREAGDEFEL-- 38 usage_06198.pdb 27 ----------P-----------------------------M-AAVKQALREAGDEFELRY 46 usage_06399.pdb 7 -------------------------------------------RELVVDFLSYKLSQKG- 22 usage_07743.pdb 32 -----------V----------------------------EESAVKQALREAGDEFELR- 51 usage_07909.pdb 30 -DARE-VI--P-----------------------------M-AAVKQALREAGDEFELR- 54 v lr agd f usage_00286.pdb -------- usage_00651.pdb 63 RRAF---- 66 usage_00747.pdb 58 R---RAFS 62 usage_00903.pdb 48 R------- 48 usage_01337.pdb -------- usage_02219.pdb -------- usage_02220.pdb 59 R------- 59 usage_03486.pdb -------- usage_04103.pdb -------- usage_04104.pdb -------- usage_04133.pdb -------- usage_04134.pdb -------- usage_04286.pdb 100 R------- 100 usage_05761.pdb -------- usage_05762.pdb -------- usage_06198.pdb 47 R------- 47 usage_06399.pdb -------- usage_07743.pdb -------- usage_07909.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################