################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:24 2021 # Report_file: c_0212_10.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00006.pdb # 2: usage_00092.pdb # 3: usage_00117.pdb # 4: usage_00118.pdb # 5: usage_00129.pdb # 6: usage_00132.pdb # 7: usage_00182.pdb # 8: usage_00204.pdb # 9: usage_00229.pdb # 10: usage_00237.pdb # 11: usage_00238.pdb # 12: usage_00248.pdb # 13: usage_00350.pdb # 14: usage_00368.pdb # 15: usage_00377.pdb # # Length: 103 # Identity: 31/103 ( 30.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/103 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/103 ( 6.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --QLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWIGLIDPENGNTIY 58 usage_00092.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSY 59 usage_00117.pdb 1 -VQLQQPGAELVKPGTSVKLSCKGYGYTFTSYWMHWVKQRPGQGLEWIGEIDPSESNTNY 59 usage_00118.pdb 1 -VQLQQPGAELVKPGTSVKLSCKGYGYTFTSYWMHWVKQRPGQGLEWIGEIDPSESNTNY 59 usage_00129.pdb 1 -VQLQQSGAELVKPGSSVKISCKTSGDSFTAYNMNWVKQSHGKSLEWIGNINPYYGSTRY 59 usage_00132.pdb 1 -DQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAY 59 usage_00182.pdb 1 -VQLQQSGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGISY 59 usage_00204.pdb 1 -VQLQQSGTELMKPGRSLKISCKTTGYIFSNYWIEWVKQRPGHGLEWIGKILPGGGSNTY 59 usage_00229.pdb 1 -VQLVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKY 59 usage_00237.pdb 1 -VQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKY 59 usage_00238.pdb 1 -VQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKY 59 usage_00248.pdb 1 -VQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKY 59 usage_00350.pdb 1 QVQLQQSGAELVKPGASVKMSCKASGYTFTTYPIEWMKQNHGKSLEWIGNFHPYSDDTNY 60 usage_00368.pdb 1 --QLVQSGAEVKKPGASVKVSCKASGYTFTSYWMQWVKQAPGQGLEWMGEIDPSDSYTNY 58 usage_00377.pdb 1 -VQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKY 59 QL Q G E G svK SCK G f y WvKQ LEWiG P Y usage_00006.pdb 59 DPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARDNS-- 99 usage_00092.pdb 60 NQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYCARSTY-- 100 usage_00117.pdb 60 NQKFKGKATLTVDISSSTAYMQLSSLTSEDSAVYYCARGGYD- 101 usage_00118.pdb 60 NQKFKGKATLTVDISSSTAYMQLSSLTSEDSAVYYCARGGYD- 101 usage_00129.pdb 60 NQKFKGKATLTVDKSSSTAYIQLNSLTSEDSAVYYCAREGNYY 102 usage_00132.pdb 60 NQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTR----- 97 usage_00182.pdb 60 NQKFKGRATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSR--- 99 usage_00204.pdb 60 NDKFKGKATFTADTSSNIAYMQLSSLTSEDSAVYYCAR----- 97 usage_00229.pdb 60 NERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTR----- 97 usage_00237.pdb 60 NEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARSVY-- 100 usage_00238.pdb 60 NEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARSVY-- 100 usage_00248.pdb 60 NEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARSVY-- 100 usage_00350.pdb 61 NEKFKGKAKLTVEKSSSTVYLEFSRLTSDDSAVYYCAIH---- 99 usage_00368.pdb 59 NQKFKGKATLTVDTSTSTAYMELSSLRSEDTAVYYCARNRDY- 100 usage_00377.pdb 60 NEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCAR----- 97 n kFkGk T d S tay l sL SeD AVY C r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################