################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:25:23 2021 # Report_file: c_1387_5.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00895.pdb # 2: usage_00896.pdb # 3: usage_01215.pdb # 4: usage_01216.pdb # 5: usage_01217.pdb # 6: usage_01218.pdb # 7: usage_01219.pdb # 8: usage_01333.pdb # 9: usage_01341.pdb # 10: usage_01343.pdb # 11: usage_01344.pdb # 12: usage_01345.pdb # 13: usage_01346.pdb # 14: usage_01347.pdb # 15: usage_01348.pdb # 16: usage_01358.pdb # 17: usage_01365.pdb # 18: usage_01366.pdb # 19: usage_01367.pdb # 20: usage_01368.pdb # 21: usage_01369.pdb # 22: usage_01370.pdb # 23: usage_01455.pdb # 24: usage_01456.pdb # 25: usage_01830.pdb # 26: usage_01831.pdb # 27: usage_02449.pdb # # Length: 129 # Identity: 36/129 ( 27.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/129 ( 28.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 86/129 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00895.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KRVGFG 27 usage_00896.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KRVGFG 27 usage_01215.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-I----------- 20 usage_01216.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IGK--------- 22 usage_01217.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG---------- 21 usage_01218.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-I----------- 20 usage_01219.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-I----------- 20 usage_01333.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01341.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01343.pdb 1 ----------------------------GGTVVEINAAIAGLVGAYL-I----------- 20 usage_01344.pdb 1 ----------------------------GGTVVFINAAIAGLVGAYL------------- 19 usage_01345.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01346.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01347.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01348.pdb 1 ----------------------------GGTVVAINAAIAGLVGAYL-IG-KRV------ 24 usage_01358.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01365.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01366.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01367.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01368.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01369.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01370.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG----KR-VG- 25 usage_01455.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-IG---------- 21 usage_01456.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL------------- 19 usage_01830.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYLK------------ 20 usage_01831.pdb 1 ----------------------------GGTVVHINAAIAGLVGAYL-I----------- 20 usage_02449.pdb 1 WLTLSYIPIAHMVWGGGLLASHGALDFAGGTVVAINAAIAGLVGAYL------------- 47 GGTVV INAAIAGLVGAYL usage_00895.pdb 28 KE-----AFKPHNLPVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 82 usage_00896.pdb 28 KE-----AFKPHNLPVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 82 usage_01215.pdb 21 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_01216.pdb 23 --------HNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 72 usage_01217.pdb 22 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 72 usage_01218.pdb 21 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_01219.pdb 21 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_01333.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01341.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01343.pdb 21 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_01344.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01345.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01346.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01347.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01348.pdb 25 -----FKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 77 usage_01358.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01365.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01366.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01367.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01368.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01369.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01370.pdb 26 FGKEAFKPHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 83 usage_01455.pdb 22 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 72 usage_01456.pdb 20 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 70 usage_01830.pdb 21 -------PHNLP--MVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_01831.pdb 21 -------PHNLP--MVFTGTAILYIGWFGANAGSAGTANEIAALAFVNTVVATAAAILGW 71 usage_02449.pdb 48 -------PHNLP--MVFTGTAILYIGWFGFNAGS-------------------------- 72 VFTGTAILYIGWFGfNAGS usage_00895.pdb 83 IFGEWALRG 91 usage_00896.pdb 83 IFGEWALRG 91 usage_01215.pdb 72 IFGEWALRG 80 usage_01216.pdb 73 IFGEWALRG 81 usage_01217.pdb 73 IFGEWALRG 81 usage_01218.pdb 72 IFGEWALRG 80 usage_01219.pdb 72 IFGEWALRG 80 usage_01333.pdb 71 IFGEWALRG 79 usage_01341.pdb 71 IFGEWALRG 79 usage_01343.pdb 72 IFGEWALRG 80 usage_01344.pdb 71 IFGEWALRG 79 usage_01345.pdb 71 IFGEWALRG 79 usage_01346.pdb 71 IFGEWALRG 79 usage_01347.pdb 71 IFGEWALRG 79 usage_01348.pdb 78 IFGEWALRG 86 usage_01358.pdb 84 IFGEWALRG 92 usage_01365.pdb 84 IFGEWALRG 92 usage_01366.pdb 84 IFGEWALRG 92 usage_01367.pdb 84 IFGEWALRG 92 usage_01368.pdb 84 IFGEWAL-- 90 usage_01369.pdb 84 IFGEWALRG 92 usage_01370.pdb 84 IFGEWALRG 92 usage_01455.pdb 73 IFGEWAL-- 79 usage_01456.pdb 71 IFGEWALRG 79 usage_01830.pdb 72 IFGEWALRG 80 usage_01831.pdb 72 IFGEWALRG 80 usage_02449.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################