################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:37 2021 # Report_file: c_0788_15.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00029.pdb # 2: usage_00036.pdb # 3: usage_00039.pdb # 4: usage_00041.pdb # 5: usage_00124.pdb # 6: usage_00135.pdb # 7: usage_00207.pdb # 8: usage_00415.pdb # 9: usage_00456.pdb # # Length: 76 # Identity: 3/ 76 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 76 ( 9.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 76 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 -KTILHFWTSWCP--PCKKELPQFQSFYDAHPS---DSVKLVTVNLVNSEQNQQVVEDFI 54 usage_00036.pdb 1 -TVFFYFSASWCP--PCRAFTPQLIDFYKAH--AEKKNFEVMLISWD--E-SAEDFKDYY 52 usage_00039.pdb 1 -TVFFYFSASWCP--PCRAFTPQLIDFYKAH--AEKKNFEVMLISWD--E-SAEDFKDYY 52 usage_00041.pdb 1 -TVFFYFSASWCP--PCRAFTPQLIDFYKAH--AEKKNFEVMLISWD--E-SAEDFKDYY 52 usage_00124.pdb 1 -LVFFYFSASWCP--PCRGFTPQLIEFYDKF--HESKNFEVVFCTWD--E-EEDGFAGYF 52 usage_00135.pdb 1 KYTILFFWDSQCGHC--QQETPKLYDWWLKN--RA-KGIQVYAANIE--R-KDEEWLKFI 52 usage_00207.pdb 1 -TVFFYFSASWCP--PSRAFTPQLIDFYKAH--AEKKNFEVMLISWD--E-SAEDFKDYY 52 usage_00415.pdb 1 -AYIVNFFATWCP--PCRSEIPD-VQVQKTW--AS-RGFTFVGIAVN--E-QLPNVKNYK 50 usage_00456.pdb 1 -TVFFYFSASWCP--PCRAFTPQLIDFYKAH--AEKKNFEVMLISWD--E-SAEDFKDYY 52 F swCp P e usage_00029.pdb 55 K-A--NKLTFPIVLDS 67 usage_00036.pdb 53 A-K--MPW--LALP-- 61 usage_00039.pdb 53 A-K--MPW--LALP-- 61 usage_00041.pdb 53 A-K--MPW--LALP-- 61 usage_00124.pdb 53 A-K--MPW--LAVP-- 61 usage_00135.pdb 53 RSKKIGGW--LNVR-D 65 usage_00207.pdb 53 A-K--MPW--LALP-- 61 usage_00415.pdb 51 T-Q--G-IIYPV---- 58 usage_00456.pdb 53 A-K--MPW--LALP-- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################