################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:33 2021 # Report_file: c_0592_49.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00042.pdb # 2: usage_00134.pdb # 3: usage_00234.pdb # 4: usage_00244.pdb # 5: usage_00421.pdb # 6: usage_00514.pdb # 7: usage_00632.pdb # 8: usage_00654.pdb # 9: usage_00664.pdb # # Length: 92 # Identity: 2/ 92 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 92 ( 3.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 92 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ---QIAFIPKLVGVGFFTSGGAGAVKAGEEVG----AK-V--TYDGPTEP-SVSGQVQFI 49 usage_00134.pdb 1 --ERIAFIPKLVGVGFFTSGGKGAVDAGKALG----VD-V--TYDGPTEP-SVSGQVQLI 50 usage_00234.pdb 1 --KKVVYSTFGAQIPFFNRIGEGAKAQATVRR----LD-F--DISTS-EI-DPGKQIDSI 49 usage_00244.pdb 1 ---EYAVVLKTLSNPFWVDMKKGIEDEAKTLG----VS-V--DIFASPSEGDFQSQLQLF 50 usage_00421.pdb 1 -KPFIALSNGFIGNGWRQT-IAKFEEAAKQAQADG-LI-GKYKVVNAPGNNSATEQVAQI 56 usage_00514.pdb 1 --KTVVNISKVDG-PWFN-RGEGVVQAGKEFN----LN-A--SQVGPSST-DAPQQVKII 48 usage_00632.pdb 1 ----IAVIVKTVNSTFWQNVQKGADAAIGKQK---AHT-I--TFQGPAAESAIADQVN-V 49 usage_00654.pdb 1 KPWKLCVSFPH-KDAYWLGVDYGVAEESKRLG------VK--NLVEAGGYTELNKQISQI 51 usage_00664.pdb 1 -AERIAFIPKLVGVGFFTSGGNGAQEAGKALG----ID-V--TYDGPTEP-SVSGQVQLV 51 g Q usage_00042.pdb 50 NNFVNQGYNALIVSSVSPDGLC---------- 71 usage_00134.pdb 51 NNFVNQGYNAIVVSAVSPDGLC---------- 72 usage_00234.pdb 50 DNAVAQQPDGLIVSPIDGSALV---------- 71 usage_00244.pdb 51 EDLSNKNYKGIAFAPLSSVNLV---------- 72 usage_00421.pdb 57 KSLLLQKPDALLINPASPTALQ---------- 78 usage_00514.pdb 49 EDLIARKVDAITIVPNDANVLE---------- 70 usage_00632.pdb 50 ENAVNRKVDAILLAPSDPDALV---------- 71 usage_00654.pdb 52 EDCVASGTDAVIIGAISADGLN---------- 73 usage_00664.pdb 52 NNFVNQGYDAIIVSAVSPDGLCPALKRAMQRG 83 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################