################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:12 2021 # Report_file: c_0814_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00082.pdb # 2: usage_00083.pdb # 3: usage_00110.pdb # 4: usage_00298.pdb # 5: usage_00299.pdb # 6: usage_00300.pdb # 7: usage_00301.pdb # 8: usage_00302.pdb # 9: usage_00321.pdb # 10: usage_00423.pdb # 11: usage_00424.pdb # 12: usage_00485.pdb # # Length: 89 # Identity: 12/ 89 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 89 ( 20.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 89 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 SSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 57 usage_00083.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00110.pdb 1 DSRLQYIMYRELTAAGVANNARSATAIAVDVKTGEILAMTSWPSYNPNDKGGLSNKD--- 57 usage_00298.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00299.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00300.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00301.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00302.pdb 1 -SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKE--G-ITEDF 56 usage_00321.pdb 1 -IELQKKAEEQLTAAVKDFEAKQGGSIA-NPRTGEIYAAASYPLPDFVDYE--------- 49 usage_00423.pdb 1 DSNIQVFVEEALDG-VERYQPKDLFAVV-DAKTGEILAYSQRPTFNPETGK--D-FG--K 53 usage_00424.pdb 1 DSNIQVFVEEALDG-VERYQPKDLFAVV-DAKTGEILAYSQRPTFNPETGK--D-FG--K 53 usage_00485.pdb 1 DLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPNNRRNLQ-PA--- 56 Q k kTGEIlA P usage_00082.pdb 58 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 86 usage_00083.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00110.pdb 58 AMRNRGAIDMFEPGSTMKPFTVAAALES- 85 usage_00298.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00299.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00300.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00301.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00302.pdb 57 VWRDILYQSNYEPGSTMKVMMLAAAIDNN 85 usage_00321.pdb 50 SLNLKLVSSIYEPGSVFKVITTSIGVDNN 78 usage_00423.pdb 54 KWANDLYQNTYEPGSTFKSYGLAAAIQEG 82 usage_00424.pdb 54 KWANDLYQNTYEPGSTFKSYGLAAAIQEG 82 usage_00485.pdb 57 AMRNRAMIDVFEPGSTVKPFSMSAALAS- 84 EPGSt K aa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################