################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:27 2021 # Report_file: c_1491_99.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00387.pdb # 2: usage_00552.pdb # 3: usage_00970.pdb # 4: usage_02360.pdb # 5: usage_02361.pdb # 6: usage_02536.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 54 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 54 ( 63.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00387.pdb 1 LPELRSLSVQGLQRIFYLKLEDLVPA----------------PALIENMFVTT- 37 usage_00552.pdb 1 LPELRTLCTQGLQRIFYLKLEDLVPP----------------PPIIDKIFMDTL 38 usage_00970.pdb 1 -PELRTLCTQGLQRIFYLKLEDLVPP----------------PPIIDKIFMDTL 37 usage_02360.pdb 1 -PELRTLCTQGLQRIFYLKLEDLVPP----------------PPIIDKIFMDTL 37 usage_02361.pdb 1 LPELRTLCTQGLQRIFYLKLEDLVPP----------------PPIIDKIFMDTL 38 usage_02536.pdb 1 ------YGDVSKRMYQEI--------FVPDSDADITPLSFIISWTALNTF---- 36 l qglqrifyl p i F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################