################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:26 2021 # Report_file: c_1257_39.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00049.pdb # 4: usage_00137.pdb # 5: usage_00143.pdb # 6: usage_00180.pdb # 7: usage_00237.pdb # 8: usage_00515.pdb # 9: usage_00516.pdb # # Length: 45 # Identity: 1/ 45 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 45 ( 4.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 45 ( 64.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 -GDAILSVNGEDLSSATFDEAVQALKK-T-----GKEVVLEVKY- 37 usage_00047.pdb 1 --DAILSVNGEDLSSATFDEAVQALKK-T-----GKEVVLEVKY- 36 usage_00049.pdb 1 -GDAILSVNGEDLSSATFDEAVQALKK-T-----GKEVVLEVKY- 37 usage_00137.pdb 1 --DAILSVNGEDLSSATHDEAVQALKK-T-----GKEVVLEVKY- 36 usage_00143.pdb 1 G-S--VLVDGQELTTLSESELTKARRQIGIF-------------- 28 usage_00180.pdb 1 -FDFIVSINGSRLNKD-NDTLKDLLKA-N--V-EK-PVKMLIY-- 36 usage_00237.pdb 1 KYHLDLS--GH-----DLSSVGADIKH-C--QS-KGVPVSL---- 30 usage_00515.pdb 1 --DYIKAVNGINLAKFRHDEIISLLKN-V-----GERVVLEVEYE 37 usage_00516.pdb 1 --DYIKAVNGINLAKFRHDEIISLLKN-V-----GERVVLEVEYE 37 G k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################