################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:11 2021 # Report_file: c_0174_52.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00189.pdb # 2: usage_00400.pdb # 3: usage_00401.pdb # 4: usage_00467.pdb # # Length: 260 # Identity: 2/260 ( 0.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/260 ( 10.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 191/260 ( 73.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00189.pdb 1 PYIFKASFDKANRSSIH-----SYRGVG--------LEEGLKIFEKVKAEFGIPVITDV- 46 usage_00400.pdb ------------------------------------------------------------ usage_00401.pdb 1 ----------------------GYFT-IIAGPCSVEGREMLMETAHFLSELGVKVLRGGA 37 usage_00467.pdb 1 -----------------AYKPRSFQG-L--------GEKGLEYLREAADKYGMYVVTEA- 33 usage_00189.pdb 47 ------------HEPHQCQPVAEVC----DVIQLPARLAQQTDLVVAMAKTGNVVNIKKP 90 usage_00400.pdb 1 -----------------------------DIIQIGARNAQNFRLLSKAGSYNKPVLLKRG 31 usage_00401.pdb 38 YKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEAL---GEDDLPKVAEYADIIQIGAR 94 usage_00467.pdb 34 ------------LGEDDLPKVAEYA----DIIQIGARNAQNFRLLSKAGSYNKPVLLKRG 77 d iq Ar ll k y v k usage_00189.pdb 91 ---QGLSPSQMKNIVEKFHEAGNGKLILCERGS--SFGYD---NLVVDM----LGFGVMK 138 usage_00400.pdb 32 ---FMNTIEEFLLSAEYIANSGNTKIILCERGI--RTFE-KATRNTLDI----SAVPIIR 81 usage_00401.pdb 95 NAQ----NFRLLS---KAGSYNK-PVLLKRGFMNT-------------IEEFLLSAEYIA 133 usage_00467.pdb 78 ---FMNTIEEFLLSAEYIANSGNTKIILCERGI--RTFE-KATRNTLDI----SAVPIIR 127 l gn k iLcerg i i usage_00189.pdb 139 QTCGNLPVIFDV------------------------------------------------ 150 usage_00400.pdb 82 KESH-LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFEL 140 usage_00401.pdb 134 NSGN-TKIILCE------------------------------------------------ 144 usage_00467.pdb 128 KESH-LPILVDP------------------------------------------------ 138 lpi d usage_00189.pdb -------------------- usage_00400.pdb 141 FKELVQEMKKLADALGVKVN 160 usage_00401.pdb -------------------- usage_00467.pdb -------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################