################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:52 2021 # Report_file: c_1388_46.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00143.pdb # 2: usage_00156.pdb # 3: usage_00172.pdb # 4: usage_00363.pdb # 5: usage_00547.pdb # # Length: 109 # Identity: 0/109 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/109 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/109 ( 80.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 RFKAVENCNYAVDLGKNQGFSLVGIQGADITDGSRTLTLALVWQMMRMNITKTL-HS--- 56 usage_00156.pdb 1 -FHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ--VSG 57 usage_00172.pdb 1 RQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMP-V-WED 58 usage_00363.pdb 1 -----------------------------------------------HFQISDIQ--VSG 11 usage_00547.pdb 1 RFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ--VSG 58 h is usage_00143.pdb 57 ----TL-SDSDMVAWANSMA----------------------------- 71 usage_00156.pdb 58 QS-EDMTAKEKLLLWSQRM------------------------------ 75 usage_00172.pdb 59 --EKKQTPKQRLLGRIQNKI----------------------------- 76 usage_00363.pdb 12 QS-EDMTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHK 59 usage_00547.pdb 59 QS-EDMTAKEKLLLWSQRMVE---------------------------- 78 k ll w q m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################