################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:36 2021 # Report_file: c_1028_47.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00004.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00314.pdb # 5: usage_00542.pdb # # Length: 64 # Identity: 8/ 64 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 64 ( 23.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 64 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 PLFTIHEYDPLDSS------DTPADWQLIADDIAANYDK--YDGFVILHGTDTAYTASAL 52 usage_00029.pdb 1 -DFTIHEYTP----LMDSSDMTPEDWQHIAEDIKAHYDD--YDGFVILHGTDTMAYTASA 53 usage_00030.pdb 1 -DFTIHEYTP----LMDSSDMTPEDWQHIAEDIKAHYDD--YDGFVILHGTDTMAYTASA 53 usage_00314.pdb 1 -RIQGEQV-S----NIGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYF 54 usage_00542.pdb 1 -NIKGEQV-A----SIGSENMTSDVLLTLSKRVNELLARSDVDGVVITHGTDTLDESPYF 54 mt w a d dG VI HGTDT usage_00004.pdb 53 SF-- 54 usage_00029.pdb 54 LSFM 57 usage_00030.pdb 54 LSFM 57 usage_00314.pdb 55 LNLV 58 usage_00542.pdb 55 LNLT 58 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################