################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:45 2021 # Report_file: c_0299_24.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00080.pdb # 2: usage_00149.pdb # 3: usage_00175.pdb # 4: usage_00180.pdb # 5: usage_00187.pdb # # Length: 170 # Identity: 21/170 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/170 ( 25.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/170 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 MLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLI-PGTK 59 usage_00149.pdb 1 DLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFGIPEQ----K 56 usage_00175.pdb 1 DLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHH----T 56 usage_00180.pdb 1 NLIYPIFVTDVPDDVQPIASLPGVARYGVNQLEEMLRPLVEAGLRCVLIFGVPSRD---- 56 usage_00187.pdb 1 MLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLI-PGTK 59 L P F dd s P R l l G r v FG p usage_00080.pdb 60 DPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLC-EYTSHGHCGVLYDDG-TINRER 117 usage_00149.pdb 57 TEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALD-PFTPFGHDGLVK-DG-IILNDE 113 usage_00175.pdb 57 DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFC-EYTSHGHCGVLE---HGVDNDA 112 usage_00180.pdb 57 --------SEDSPTIEAVRLLRKTFPSLLVACDVCLCP------------------LSEE 90 usage_00187.pdb 60 DPVGTAADDPAGPVIQGIKFIREKFPELYIICDVCLC-EYTSHGHCGVLYDDG-TINRER 117 g Pel Dvclc usage_00080.pdb 118 SVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLS 167 usage_00149.pdb 114 TVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDHSDVGILS- 162 usage_00175.pdb 113 TLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMS- 161 usage_00180.pdb 91 SRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKAALLKHGLGNRVSVMS 140 usage_00187.pdb 118 SVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLS 167 L Av A AGa vaPSdm DGr I L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################