################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:19 2021 # Report_file: c_0907_38.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00010.pdb # 2: usage_00155.pdb # 3: usage_00215.pdb # 4: usage_00231.pdb # 5: usage_00277.pdb # 6: usage_00278.pdb # 7: usage_00279.pdb # 8: usage_00280.pdb # # Length: 70 # Identity: 0/ 70 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 70 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 70 ( 64.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --------------LPVKGECLSVWND-----DIPLTKTLYHDHCYIVPRK-----S-G- 34 usage_00155.pdb 1 ----VDNITYSPAKIGEEIVITAHILKQGKTL-----------AFASVDLTNKTTGKLI- 44 usage_00215.pdb 1 SVYP----------VKGECVMVRAPV-------PLLQTTVFAKNGCYIVPK--------S 35 usage_00231.pdb 1 NNAF----------LPVKGECLSVWND-----DIPLTKTLYHDHCYIVPRK-----S-G- 38 usage_00277.pdb 1 --------------LPVKGECLSVWND-----DIPLTKTLYHDACYIVPRK-----S-G- 34 usage_00278.pdb 1 NNAF----------LPVKGECLSVWND-----DIPLTKTLYHDACYIVPRK-----S-G- 38 usage_00279.pdb 1 --------------LPVKGECLSVWND-----DIPLTKTLYHDACYIVPRK-----S-G- 34 usage_00280.pdb 1 --------------LPVKGECLSVWND-----DIPLTKTLYHDACYIVPRK-----S-G- 34 v k usage_00010.pdb 35 RLVVG----- 39 usage_00155.pdb 45 AQGRHTK--- 51 usage_00215.pdb 36 GNRLLIG--- 42 usage_00231.pdb 39 RLVVGATMKP 48 usage_00277.pdb 35 RLVVGATMKP 44 usage_00278.pdb 39 RLVVGATMKP 48 usage_00279.pdb 35 RLVVGATMKP 44 usage_00280.pdb 35 RLVVG----- 39 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################