################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:54 2021 # Report_file: c_1172_424.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_02108.pdb # 2: usage_02611.pdb # 3: usage_03660.pdb # 4: usage_04906.pdb # # Length: 37 # Identity: 1/ 37 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 37 ( 48.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 37 ( 32.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02108.pdb 1 --PAMTPVG---ESPAGREFAVRDPAGNCVHFT---- 28 usage_02611.pdb 1 --PAMTAIR---EVPWGREFGLRDPAGNLVHFSELSE 32 usage_03660.pdb 1 DANSGGFYGGSL--SGSQYAISSTA-NQVTAFVAG-- 32 usage_04906.pdb 1 -GPAMTPVG---ESPAGREFAVRDPAGNCVHFTAGE- 32 pamt g p gref rdp gn vhF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################