################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:20 2021 # Report_file: c_0700_72.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00115.pdb # 2: usage_00326.pdb # 3: usage_00359.pdb # 4: usage_00488.pdb # 5: usage_00489.pdb # 6: usage_00778.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 69 ( 7.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 69 ( 49.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 --EPVFYKEQAV---GYVTSAAYGY-TVAKPIAYSYLPGTV-SVGDSVDIEYF------G 47 usage_00326.pdb 1 --YKVYANGEMI---GEVTSGTLSP-LLNVGIGIAFVKEEYAKPGIEIEVEIR------G 48 usage_00359.pdb 1 --YEVLKNGERV---GEITSGNFSP-TLGKSIALALVSKSV-KIGDQLGVVFP-----GG 48 usage_00488.pdb 1 --YEVFQNGKSV---GKVTTGTQSP-TLGKNVGLALIDSETSEIGTVVDVEIR------K 48 usage_00489.pdb 1 --YEVFQNGKSV---GKVTTGTQSP-TLGKNVGLALIDSETSEIGTVVDVEIR------K 48 usage_00778.pdb 1 GV-------QVLSSTFLDETPSLAPN-GTMVIYSSSQG----MGSVLNLVSTDGRFKA-- 46 g t p g v usage_00115.pdb 48 RRITATVTE 56 usage_00326.pdb 49 QRKK----- 52 usage_00359.pdb 49 KLVEALVVK 57 usage_00488.pdb 49 KLVK----- 52 usage_00489.pdb 49 KLVKAKVVK 57 usage_00778.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################