################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:23 2021 # Report_file: c_0240_28.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00001.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # # Length: 123 # Identity: 43/123 ( 35.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/123 ( 95.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/123 ( 4.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 56 usage_00029.pdb 1 ----RVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMP 56 usage_00030.pdb 1 PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMP 60 rvvvgDDHPlfReGVvralSlsgsvnVVGEAddGaaalELikahlPDvaLLDyrMP usage_00001.pdb 57 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 116 usage_00029.pdb 57 GMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDC 116 usage_00030.pdb 61 GMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDC 120 GMdGaqvaaavRsyeLptRvlliSahdepaiVyqALqqGAaGfLLKDstrteivKAvldc usage_00001.pdb 117 A-- 117 usage_00029.pdb 117 AK- 118 usage_00030.pdb 121 AKG 123 A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################