################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:16:37 2021 # Report_file: c_1417_98.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00069.pdb # 2: usage_00088.pdb # 3: usage_00089.pdb # 4: usage_00095.pdb # 5: usage_00097.pdb # 6: usage_00161.pdb # 7: usage_00162.pdb # 8: usage_00171.pdb # 9: usage_00172.pdb # 10: usage_00219.pdb # 11: usage_00489.pdb # 12: usage_00491.pdb # 13: usage_00664.pdb # 14: usage_00669.pdb # 15: usage_00817.pdb # 16: usage_00997.pdb # 17: usage_01004.pdb # 18: usage_01006.pdb # 19: usage_01010.pdb # 20: usage_01011.pdb # 21: usage_01014.pdb # 22: usage_01015.pdb # 23: usage_01018.pdb # 24: usage_01019.pdb # 25: usage_01487.pdb # # Length: 34 # Identity: 25/ 34 ( 73.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 34 ( 73.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 34 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 -LVLLLRVLGYDQETLARELGAYGELVQGLMDE- 32 usage_00088.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00089.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00095.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00097.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00161.pdb 1 PLVLLLRVLGYDQETLVRELSAYGDLVQGL---- 30 usage_00162.pdb 1 PLVLLLRVLGYDQETLVRELSAYGDLVQGL---- 30 usage_00171.pdb 1 -LVLLLRVLGYDQETLVRELSAYGDLVQGL---- 29 usage_00172.pdb 1 -LVLLLRVLGYDQETLVRELSAYGDLVQGL---- 29 usage_00219.pdb 1 PLVLLLRVLGYDQETLARELGAYGELVQGLMDES 34 usage_00489.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00491.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00664.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_00669.pdb 1 -LVLLLRVLGYDQETLARELGAYGELVQGL---- 29 usage_00817.pdb 1 -LVLLLRVLGYDQETLARELGAYGELVQGLM--- 30 usage_00997.pdb 1 -LVLLLRVLGYDQETLARELGAYGELVQGL---- 29 usage_01004.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01006.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01010.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01011.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01014.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01015.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01018.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01019.pdb 1 --VLLLRVLGYDQETLARELGAYGELVQGLMD-- 30 usage_01487.pdb 1 -LVLLLRVLGYDQETLARELGAYGELVQGLM--- 30 VLLLRVLGYDQETL REL AYG LVQGL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################