################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:47:26 2021 # Report_file: c_0302_19.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00147.pdb # 2: usage_00148.pdb # 3: usage_00149.pdb # 4: usage_00188.pdb # 5: usage_00252.pdb # 6: usage_00253.pdb # 7: usage_00254.pdb # 8: usage_00255.pdb # 9: usage_00256.pdb # 10: usage_00257.pdb # 11: usage_00266.pdb # 12: usage_00267.pdb # 13: usage_00285.pdb # 14: usage_00304.pdb # 15: usage_00305.pdb # 16: usage_00306.pdb # 17: usage_00307.pdb # 18: usage_00308.pdb # 19: usage_00309.pdb # 20: usage_00335.pdb # 21: usage_00336.pdb # 22: usage_00337.pdb # 23: usage_00338.pdb # 24: usage_00339.pdb # 25: usage_00340.pdb # 26: usage_00341.pdb # 27: usage_00342.pdb # 28: usage_00343.pdb # # Length: 123 # Identity: 55/123 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/123 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/123 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00147.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00148.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00149.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00188.pdb 1 ----VVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEV 56 usage_00252.pdb 1 -----RVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 55 usage_00253.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00254.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00255.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00256.pdb 1 -----RVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 55 usage_00257.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00266.pdb 1 ---KTRVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSS 57 usage_00267.pdb 1 ---KTRVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSS 57 usage_00285.pdb 1 --SMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEV 58 usage_00304.pdb 1 HHHMNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 60 usage_00305.pdb 1 ----NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 56 usage_00306.pdb 1 HHHMNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 60 usage_00307.pdb 1 ----NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 56 usage_00308.pdb 1 HHHMNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 60 usage_00309.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00335.pdb 1 -----RVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 55 usage_00336.pdb 1 ----NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 56 usage_00337.pdb 1 ----NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 56 usage_00338.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00339.pdb 1 ----NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 56 usage_00340.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00341.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00342.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 usage_00343.pdb 1 ---MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEV 57 YPGTFDP T GH DL RAS FD A K P FSLE R A usage_00147.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00148.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00149.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00188.pdb 57 LGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFM 116 usage_00252.pdb 56 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 115 usage_00253.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00254.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00255.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00256.pdb 56 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 115 usage_00257.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00266.pdb 58 LGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFL 117 usage_00267.pdb 58 LGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFL 117 usage_00285.pdb 59 LGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRA---FEYEFQMAGMNRYLLPDVETMFM 115 usage_00304.pdb 61 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 120 usage_00305.pdb 57 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 116 usage_00306.pdb 61 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 120 usage_00307.pdb 57 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 116 usage_00308.pdb 61 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 120 usage_00309.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00335.pdb 56 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 115 usage_00336.pdb 57 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 116 usage_00337.pdb 57 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 116 usage_00338.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00339.pdb 57 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 116 usage_00340.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00341.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00342.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 usage_00343.pdb 58 TKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFL 117 H NV GF LL F A RGLRA FEYEFQ A MNR L P E F usage_00147.pdb 118 TPS 120 usage_00148.pdb 118 T-- 118 usage_00149.pdb 118 T-- 118 usage_00188.pdb 117 TPS 119 usage_00252.pdb 116 T-- 116 usage_00253.pdb 118 T-- 118 usage_00254.pdb 118 T-- 118 usage_00255.pdb 118 T-- 118 usage_00256.pdb 116 T-- 116 usage_00257.pdb 118 T-- 118 usage_00266.pdb 118 T-- 118 usage_00267.pdb 118 T-- 118 usage_00285.pdb 116 TPS 118 usage_00304.pdb 121 TPS 123 usage_00305.pdb 117 TPS 119 usage_00306.pdb 121 TPS 123 usage_00307.pdb 117 TPS 119 usage_00308.pdb 121 TPS 123 usage_00309.pdb 118 TPS 120 usage_00335.pdb 116 T-- 116 usage_00336.pdb 117 T-- 117 usage_00337.pdb 117 T-- 117 usage_00338.pdb 118 T-- 118 usage_00339.pdb 117 T-- 117 usage_00340.pdb 118 T-- 118 usage_00341.pdb 118 TPS 120 usage_00342.pdb 118 T-- 118 usage_00343.pdb 118 T-- 118 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################