################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:27 2021 # Report_file: c_1420_20.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00018.pdb # 2: usage_00038.pdb # 3: usage_00332.pdb # 4: usage_00334.pdb # 5: usage_00459.pdb # 6: usage_00814.pdb # 7: usage_00887.pdb # 8: usage_00943.pdb # 9: usage_00988.pdb # 10: usage_00989.pdb # 11: usage_01183.pdb # 12: usage_01184.pdb # 13: usage_01205.pdb # 14: usage_01221.pdb # 15: usage_01317.pdb # 16: usage_01339.pdb # 17: usage_01340.pdb # 18: usage_01341.pdb # 19: usage_01342.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 65 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 65 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -KEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 59 usage_00038.pdb 1 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 60 usage_00332.pdb 1 -QEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEI---------- 49 usage_00334.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_00459.pdb 1 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 60 usage_00814.pdb 1 --SIDGLYQFLFKFIFDVDERYIKLYVQL-SS---A--PEALNSEIKHHLQEINTTLHDE 52 usage_00887.pdb 1 -KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 59 usage_00943.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_00988.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_00989.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01183.pdb 1 -PVFLRLLDLWFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01184.pdb 1 -PVFLRLLDLWFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01205.pdb 1 DQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEK 60 usage_01221.pdb 1 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 60 usage_01317.pdb 1 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 60 usage_01339.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01340.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01341.pdb 1 -PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 59 usage_01342.pdb 1 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 60 fl l f s q e f q lq usage_00018.pdb 60 NQRT- 63 usage_00038.pdb 61 HRAT- 64 usage_00332.pdb ----- usage_00334.pdb 60 HRAT- 63 usage_00459.pdb 61 HRAT- 64 usage_00814.pdb 53 LIKYY 57 usage_00887.pdb 60 NQRT- 63 usage_00943.pdb 60 HRAT- 63 usage_00988.pdb 60 HRAT- 63 usage_00989.pdb 60 HRAT- 63 usage_01183.pdb 60 HRAT- 63 usage_01184.pdb 60 HRAT- 63 usage_01205.pdb 61 HRET- 64 usage_01221.pdb 61 HRAT- 64 usage_01317.pdb 61 HRAT- 64 usage_01339.pdb 60 HRAT- 63 usage_01340.pdb 60 HRAT- 63 usage_01341.pdb 60 HRAT- 63 usage_01342.pdb 61 HRAT- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################