################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:59 2021 # Report_file: c_0611_74.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00070.pdb # 2: usage_00266.pdb # 3: usage_00281.pdb # 4: usage_00299.pdb # 5: usage_00300.pdb # 6: usage_00697.pdb # # Length: 85 # Identity: 3/ 85 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 85 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 85 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 ---GTSEAREFATRTG-----PVSGPVLELAAG-GRLTFPFLD-LGWEVTALELSTSVLA 50 usage_00266.pdb 1 SQEYRSRIETLEPLLKY----KKRGKVLDLACGVGGFSFLLED-YGFEVVGVDISED-IR 54 usage_00281.pdb 1 ----PLLERTALAA---------TGTILDVGAGSGCHALALQE-SGKEVSAIDISPLSVE 46 usage_00299.pdb 1 ---VKAEIDFVEEIFK-EDAKREVRRVLDLACGTGIPTLELAE-RGYEVVGLDLHEEMLR 55 usage_00300.pdb 1 ---VKAEIDFVEEIFK-EDAKREVRRVLDLACGTGIPTLELAE-RGYEVVGLDLHEEMLR 55 usage_00697.pdb 1 ---LDTLYDFIFS--A-----ETPRRVLDIACG-L-NPLALYERGIASVWGCDIHQGLGD 48 vLd a G g l g eV d usage_00070.pdb 51 AFRKRLAEAPADVRDR----CTLVQ 71 usage_00266.pdb 55 KAREYAKSRE---SN-----VEFIV 71 usage_00281.pdb 47 VKLRGVK--------DARQV----- 58 usage_00299.pdb 56 VARRKAKERN---LK-----IEFLQ 72 usage_00300.pdb 56 VARRKAKERN---LK-----IEFLQ 72 usage_00697.pdb 49 VITPFAREKD---WD-----FTFAL 65 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################