################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:30 2021 # Report_file: c_0762_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00002.pdb # 2: usage_00425.pdb # 3: usage_00426.pdb # 4: usage_00427.pdb # 5: usage_00428.pdb # 6: usage_00429.pdb # 7: usage_00430.pdb # 8: usage_00513.pdb # # Length: 78 # Identity: 4/ 78 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 78 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 78 ( 41.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ETLGL-IGFGRTGQAVAVRAKA-FG---FSVIFYDPYLQD-GIERSL-----GVQRVY-- 47 usage_00425.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG---MKVVLVDKNP--QALIRNY-----ADEFYCF- 47 usage_00426.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG---MKVVLVDKNP--QALIRNY-----ADEFYCF- 47 usage_00427.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG---MKVVLVDKNP--QALIRNY-----ADEFYCF- 47 usage_00428.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG---MKVVLVDKNP--QALIRNY-----ADEFYCF- 47 usage_00429.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG---MKVVLVDKNP--QALIRNY-----ADEFYCF- 47 usage_00430.pdb 1 KTICL-VGGKLQGFEAAYLSKK-AG----KVVLVDKNP--QALIRNY-----ADEFYCF- 46 usage_00513.pdb 1 ITVSIAGGSQPEILQLVKKALKEA-EQPLQFIVFDTNE--N------LDTENLWKYVHCS 51 T l G g a kk a v D n usage_00002.pdb 48 ---------TLQDLLYQS 56 usage_00425.pdb 48 DVIK--EPEKLLELSKRV 63 usage_00426.pdb 48 DVIK--EPEKLLELSKRV 63 usage_00427.pdb 48 DVIK--EPEKLLELSKRV 63 usage_00428.pdb 48 DVIK--EPEKLLELSKRV 63 usage_00429.pdb 48 DVIK--EPEKLLELSKRV 63 usage_00430.pdb 47 DVIK--EPEKLLELSKRV 62 usage_00513.pdb 52 DE--AAVAQEAVSLVATG 67 l L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################