################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:00:08 2021 # Report_file: c_0627_4.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00015.pdb # 7: usage_00016.pdb # 8: usage_00017.pdb # 9: usage_00018.pdb # 10: usage_00022.pdb # 11: usage_00023.pdb # 12: usage_00047.pdb # 13: usage_00048.pdb # 14: usage_00051.pdb # 15: usage_00109.pdb # 16: usage_00113.pdb # 17: usage_00114.pdb # 18: usage_00115.pdb # # Length: 94 # Identity: 15/ 94 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 94 ( 25.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 94 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -YVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPGLVSGELIGCFG 59 usage_00002.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00003.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00013.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00014.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00015.pdb 1 -SVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFG 59 usage_00016.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00017.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00018.pdb 1 --VSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 58 usage_00022.pdb 1 DSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFC 60 usage_00023.pdb 1 -SVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFC 59 usage_00047.pdb 1 -SVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFG 59 usage_00048.pdb 1 -SVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFG 59 usage_00051.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00109.pdb 1 --LAHC-VAEEISRASASVGLSYGAHSNLCVNQINRNGKPAQKSRYLPKLISGEHVGALA 57 usage_00113.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00114.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 usage_00115.pdb 1 -YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 59 v E d sv S L Gs Q YL L GE G f usage_00001.pdb 60 LTEP--------MKTRAEKI--DGGYRLSGSKMW 83 usage_00002.pdb 60 LTEG-------SMVTRARKV--PGGYSLSGSKMW 84 usage_00003.pdb 60 LTEP------GSMVTRARKV--PGGYSLSGSKMW 85 usage_00013.pdb 60 LTEPN-----GSMVTRARKV--PGGYSLSGSKMW 86 usage_00014.pdb 60 LTEP-------SMVTRARKV--PGGYSLSGSKMW 84 usage_00015.pdb 60 LTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTW 93 usage_00016.pdb 60 LTEP--------MVTRARKV--PGGYSLSGSKMW 83 usage_00017.pdb 60 LTEPNHGSDPGSMVTRARKV--PGGYSLSGSKMW 91 usage_00018.pdb 59 LTEP--------MVTRARKV--PGGYSLSGSKMW 82 usage_00022.pdb 61 LTEPQAGSDAKSLRAEARRV--KGGFVLNGVKSW 92 usage_00023.pdb 60 LTEPQAGSDAKSLRAEARRV--KGGFVLNGVKSW 91 usage_00047.pdb 60 LTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTW 93 usage_00048.pdb 60 LTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTW 93 usage_00051.pdb 60 LTEPN-----HSMVTRARKV--PGGYSLSGSKMW 86 usage_00109.pdb 58 SEPG-------VSKLKADKR--GDRYVLNGSKW- 81 usage_00113.pdb 60 LTEP--------MVTRARKV--PGGYSLSGSKMW 83 usage_00114.pdb 60 LTEPNH--G-GSMVTRARKV--PGGYSLSGSKMW 88 usage_00115.pdb 60 LTEP-------SMVTRARKV--PGGYSLSGSKMW 84 lte A L G K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################