################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:28 2021 # Report_file: c_0834_114.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00088.pdb # 2: usage_00593.pdb # 3: usage_00594.pdb # # Length: 92 # Identity: 9/ 92 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 92 ( 67.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 92 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 DEYYLALFNEYKNAINH-INYQFKAYDSST------SVDKFLGYYNNAASKYKGG-NVLI 52 usage_00593.pdb 1 --NHMAIFENQG---LKTATYPYWA-----NETKSLDLNGFLNAIQKAP------EGSIF 44 usage_00594.pdb 1 --NHMAIFENQG---LKTATYPYWA-----NETKSLDLNGFLNAIQKAP------EGSIF 44 nhmAiFenqg lk atYpywA dlngFLnaiqkAp gsif usage_00088.pdb 53 SFSTGPHPG----GLPVDKGFFDAATSLKNKG 80 usage_00593.pdb 45 VLHSCAHN-PTGLDPTS-EQWVQIVDAIASKN 74 usage_00594.pdb 45 VLHSCAHN-PTGLDPTS-EQWVQIVDAIASKN 74 vlhscaHn dpts eqwvqivdaiasKn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################