################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:07:59 2021 # Report_file: c_0193_5.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00008.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00020.pdb # 8: usage_00021.pdb # 9: usage_00023.pdb # 10: usage_00027.pdb # 11: usage_00032.pdb # 12: usage_00033.pdb # 13: usage_00045.pdb # 14: usage_00046.pdb # # Length: 180 # Identity: 11/180 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/180 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/180 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 SQEDAGAAITRHLLSRGKRRIGFLGAQL-DER-----VKRLDGYRAALDAADC-RDAGLE 53 usage_00015.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 57 usage_00016.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 57 usage_00017.pdb 1 ---------VQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 48 usage_00018.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 57 usage_00019.pdb 1 ---------VQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 48 usage_00020.pdb 1 -YEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 56 usage_00021.pdb 1 ---------VQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 48 usage_00023.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 57 usage_00027.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTL-EE-PIN-HAKKVKGYKRALTESGLPVRDSYI 57 usage_00032.pdb 1 DGTAGTRQAVEYLIGRGHRRIAILAWPE-DS-R-V-GNDRLQGYLEA-QTAQLPIETGYI 55 usage_00033.pdb 1 PHYQATRDALDYLFNQGHRRFAYVSGGTISG-AH-HGQSRTQAFLDF-QAHQLLVAQDLL 57 usage_00045.pdb 1 DYHLAAYQSTKKLIDSGNKKIAYIMGSL-KD-VE--NTERMVGYQEALLEANIEFDENLV 56 usage_00046.pdb 1 DYHLAAYQSTKKLIDSGNKKIAYIMGSL-KD-VE--NTERMVGYQEALLEANIEFDENLV 56 L G ia gy a usage_00008.pdb 54 WLDPQPSS---QGAD-LDRALAER-P-DCDALFCCNDDLAIGALARSQQLGIAVPERLAI 107 usage_00015.pdb 58 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEI 112 usage_00016.pdb 58 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEI 112 usage_00017.pdb 49 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDE-ALGVIHGAQDRGLNVPNDLEI 102 usage_00018.pdb 58 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDE-ALGVIHGAQDRGLNVPNDLEI 111 usage_00019.pdb 49 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDE-ALGVIHGAQDRGLNVPNDLEI 102 usage_00020.pdb 57 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDE-ALGVIHGAQDRGLNVPNDLEI 110 usage_00021.pdb 49 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDE-ALGVIHGAQDRGLNVPNDLEI 102 usage_00023.pdb 58 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEI 112 usage_00027.pdb 58 VEGDY---TYDSGIEAVEKLLEED--EKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEI 112 usage_00032.pdb 56 LRGEG---TFEVGRA-TLHLLDLSPERRPTAI-TLNDT-AIG-AAAARERGLTIGTDLAI 108 usage_00033.pdb 58 FGQIH---TAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAV 114 usage_00045.pdb 57 FEGNY---SYEQGKALAERLLER----GATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEI 109 usage_00046.pdb 57 FEGNY---SYEQGKALAERLLER----GATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEI 109 G ll D A G g vp d i usage_00008.pdb 108 AGFNDLQPAAWCTPPLTTVATPRRDIGVHAAKALLQLIDGEEPASR-RADLGFRLL---- 162 usage_00015.pdb 113 IGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSS-IVQLPHRIEF--- 168 usage_00016.pdb 113 IGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSS-IVQLPHRIEFRQ- 170 usage_00017.pdb 103 IGFDNTRLST-VRPQLTSVVQP-YDIGAVAR-LLTK-YNKETVDSS-IVQLPHRIEF--- 154 usage_00018.pdb 112 IGFDNTRLST-VRPQLTSVVQP-YDIGAVAR-LLTK-YNKETVDSS-IVQLPHRIEFRQ- 165 usage_00019.pdb 103 IGFDNTRLST-VRPQLTSVVQP-YDIGAVAR-LLTK-YNKETVDSS-IVQLPHRIEF--- 154 usage_00020.pdb 111 IGFDNTRLST-VRPQLTSVVQP-YDIGAVAR-LLTK-YNKETVDSS-IVQLPHRIEF--- 162 usage_00021.pdb 103 IGFDNTRLST-VRPQLTSVVQP-YDIGAVAR-LLTK-YNKETVDSS-IVQLPHRIEF--- 154 usage_00023.pdb 113 IGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSS-IVQLPHRIEFRQ- 170 usage_00027.pdb 113 IGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSS-IVELPHRIEFRQ- 170 usage_00032.pdb 109 IGFDDAP-VQYLFPPLSSVRQPIAEAGRKCIELLVAIVEGREPEQK-HILLQPSLIIRAS 166 usage_00033.pdb 115 G-YDDQPFAPFAKIPLTTVHQPVAS-AAAATHELLKGLG-RQVAQDTQPTLHLS------ 165 usage_00045.pdb 110 ISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQN-QLVLDHEIFS--- 165 usage_00046.pdb 110 ISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQN-QLVLDHEIFS--- 165 p Lt V qP g a L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################