################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:54 2021 # Report_file: c_0314_60.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00008.pdb # 2: usage_00253.pdb # 3: usage_00486.pdb # 4: usage_00487.pdb # # Length: 120 # Identity: 15/120 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/120 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/120 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 NTDYIAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL 59 usage_00253.pdb 1 --TDIGSISAIEDGL-----T-VVVIGAGGAGKALAYGAKEK-A-KVVIANRTYERALEL 50 usage_00486.pdb 1 -TDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 59 usage_00487.pdb 1 -TDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 59 dyIg k k vV GsGGaa Av K a Rn e e usage_00008.pdb 60 AALYGYAYINS--LENQ---Q--ADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDV 112 usage_00253.pdb 51 AEAIGGKALSLTDL---DNYEDGM-VLANTTSMGM--QPNVEETPISKDALKHYALVFDA 104 usage_00486.pdb 60 YG--EFKVISYDELSNL---K--GDVIINCTPKGM--YPKEGESPVDKEVVAKFSSAVDL 110 usage_00487.pdb 60 YG--EFKVISYDELSNL---K--GDVIINCTPKGM--YPKEGESPVDKEVVAKFSSAVDL 110 k is L v N T GM p e e p K s a D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################