################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:03:53 2021 # Report_file: c_0711_45.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00003.pdb # 2: usage_00006.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00016.pdb # 6: usage_00044.pdb # 7: usage_00076.pdb # 8: usage_00082.pdb # 9: usage_00133.pdb # 10: usage_00213.pdb # 11: usage_00272.pdb # 12: usage_00273.pdb # 13: usage_00284.pdb # 14: usage_00330.pdb # 15: usage_00362.pdb # 16: usage_00407.pdb # 17: usage_00408.pdb # 18: usage_00425.pdb # # Length: 89 # Identity: 18/ 89 ( 20.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 89 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 89 ( 31.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRPPWIEQEGPE-- 57 usage_00006.pdb 1 GSHSLRYFYTALSRPAISEPWYIAVGYLDDTQFARFDSAGETGTYKLSAPWVEQEGPE-- 58 usage_00013.pdb 1 ------YFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAESPREEPRAPWVEQEGPE-- 52 usage_00014.pdb 1 GSHSMKYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAESPREEPRAPWVEQEGPE-- 58 usage_00016.pdb 1 GSHSMKYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAESPREEPRAPWVEQEGPE-- 58 usage_00044.pdb 1 -SHSMRYFYTAMFRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 57 usage_00076.pdb 1 -SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPE-- 57 usage_00082.pdb 1 GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQVLRFSSKEE-TPRMAPW--L---EQEEA 54 usage_00133.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 58 usage_00213.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 58 usage_00272.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 58 usage_00273.pdb 1 GSHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPE-- 58 usage_00284.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 57 usage_00330.pdb 1 ---SMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPE-- 55 usage_00362.pdb 1 GSHSMKYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAESPREEPRAPWVEQEGPE-- 58 usage_00407.pdb 1 ---SMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 55 usage_00408.pdb 1 GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQVLRFSSKEE-TPRMAPW--L---EQEEA 54 usage_00425.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPE-- 58 YF T srPg EP I VGYvDd RF S E usage_00003.pdb 58 -YWDRNTQIFKTNTQTYRENLRIALRYY- 84 usage_00006.pdb 59 -YWARETEIVTSNAQFFRENLQTMLDYYN 86 usage_00013.pdb 53 -YWEEATRRAKEAAQTHRENLRTALRYYN 80 usage_00014.pdb 59 -YWEEATRRAKEAAQTHRENLRTALRYYN 86 usage_00016.pdb 59 -YWEEATRRAKEAAQTHRENLRTALRYYN 86 usage_00044.pdb 58 -YWDRNTQIFKTNTQT------------- 72 usage_00076.pdb 58 -YWDRETQKYKRQAQADRVNLRKLRGYYN 85 usage_00082.pdb 55 DDWEQQTHIVTIQGQLSERNLMTLVHFYN 83 usage_00133.pdb 59 -YWDRNTQIFKTNTQTYRESLRNLRGYY- 85 usage_00213.pdb 59 -YWDRNTQIFKTNTQTYRESLRNLRGYY- 85 usage_00272.pdb 59 -YWDRNTQIFKTNTQTYRESLRNLRGYYN 86 usage_00273.pdb 59 -YWDRETQISKTNTQTYRESLRNLRGYYN 86 usage_00284.pdb 58 -YWDRNTQIFKTNTQTYRESLRNLRGYY- 84 usage_00330.pdb 56 -YWERETQKAKGQEQWFRVSLRNLLGYYN 83 usage_00362.pdb 59 -YWEEATRRAKEAAQTHRENLRTALRYYN 86 usage_00407.pdb 56 -YWDRNTAIFKANTQTYRESLRNLRGYY- 82 usage_00408.pdb 55 DNWEQQTRIVTIQGQLSERNLMTLVHFYN 83 usage_00425.pdb 59 -YWDGETRNMKASAQTYRENLRIALRYY- 85 W T Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################