################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:37 2021 # Report_file: c_1489_56.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00258.pdb # 2: usage_00259.pdb # 3: usage_00396.pdb # 4: usage_01039.pdb # 5: usage_02304.pdb # 6: usage_02792.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 72 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 72 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 MMLE-NKELVLRILTVRENLAEGVLEFLPEM---------------VLSQIKQSNGNHRR 44 usage_00259.pdb 1 MMLE-NKELVLRILTVRENLAEGVLEFLPEM---------------VLSQIKQSNGNHRR 44 usage_00396.pdb 1 LLDE-NKELVLRILAVREDIAESVLDFLPGM---------------TRNSLAESNIAHRR 44 usage_01039.pdb 1 -----TLEEKSEFKQRVRKELEVNG------IEFYPQKEFDE----DLEDKTENDKIRQE 45 usage_02304.pdb 1 MMLE-NKELVLRILTVRENLAEGVLEFLPEM---------------VLSQIKQSNGNHRR 44 usage_02792.pdb 1 ----TRKGEEVIEKVIERRENFIEKITSDLG-----------KEKSSKILDYLKELKGVM 45 ke e usage_00258.pdb 45 SLLE-------- 48 usage_00259.pdb 45 SLLE-------- 48 usage_00396.pdb 45 HLLERLTRTVAE 56 usage_01039.pdb 46 SM---------- 47 usage_02304.pdb 45 SLLERLT----- 51 usage_02792.pdb 46 ERNF-------- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################