################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:14 2021 # Report_file: c_0141_18.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00043.pdb # 2: usage_00139.pdb # 3: usage_00166.pdb # 4: usage_00276.pdb # 5: usage_00328.pdb # 6: usage_00377.pdb # 7: usage_00392.pdb # # Length: 217 # Identity: 10/217 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/217 ( 6.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 138/217 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 ---------------------------------------------------DDASLTRAL 9 usage_00139.pdb 1 -----------------------------------------------------DTLAAAL 7 usage_00166.pdb 1 ---------------------------------------------------SLEDATTLF 9 usage_00276.pdb 1 LESALRWQEQGAEWLHFVDLDAAFNRGSNHELMAEITRQLDIKVELTGGIRDDASLERAL 60 usage_00328.pdb 1 -----------------------------------------------------ASLAAAL 7 usage_00377.pdb 1 -----------------------------------------------------DTLAAAL 7 usage_00392.pdb 1 -----------------------------------------------------EHFLEAF 7 a usage_00043.pdb 10 KAGAARVNLGTAALEDPQWTARVIAEHG-EKIAVGLDVRG----TTLAAR-----G-GDL 58 usage_00139.pdb 8 ATGCTRVNLGTAALETPEWVAKVIAEHG-DKIAVGLDVRG----TTLRGRGWTRDG-GDL 61 usage_00166.pdb 10 RAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDA 69 usage_00276.pdb 61 ATGATRVNIGTAALEKPEWIADVIRRHG-EKIAVDIAVRLEN--GEWRT---------DL 108 usage_00328.pdb 8 ATGCTRVNLGTAALESPEWVAKVIAEHG-DRIAVGLDVRG----TTLKG------G-GDL 55 usage_00377.pdb 8 ATGCTRVNLGTAALETPEWVAKVIAEHG-DKIAVGLDVRG----TTLRGRGWTRDG-GDL 61 usage_00392.pdb 8 LAGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIVAKRVDGEFMVFTHSGKKNTGILL 67 G V TAA e P a G V dl usage_00043.pdb 59 WQTLDRLNEAGCRRYVVTDVTKDGTLTGPNTELLRQVAARTSAPVVASGG-ISSLEDIAA 117 usage_00139.pdb 62 YETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGG-VSSLDDLRA 120 usage_00166.pdb 70 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGG-AGRVEHFYE 128 usage_00276.pdb 109 WEVLERLDSQGCSRFVVTDVS-----------------------------KD-------- 131 usage_00328.pdb 56 YEALERLDKEGCARYVVTDIAKDGTLQGPNLELLRNVCAATDRPVVASGG-VSSLDDLRA 114 usage_00377.pdb 62 YETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGG-VSSLDDLRA 120 usage_00392.pdb 68 RDWVVEVEKRGAGEILLTSIDRVGTKSGYDTEMIRFVRPLTTLPIIASGG-AGKMEHFLE 126 G T usage_00043.pdb 118 LARLVPQGVDSAIVGKALYNGNFTLPQALAVAGG--- 151 usage_00139.pdb 121 IAGLVPAGVEGAIVGKALYAKAFTLEEALEAT----- 152 usage_00166.pdb 129 AAAAG---ADAVLAASLFHFRVLSIAQVKRYLKERG- 161 usage_00276.pdb 132 -----------------GTLT---------------G 136 usage_00328.pdb 115 IAELVPLGVEGSIVGKALYAKAFTLEEALEAV----- 146 usage_00377.pdb 121 IAGLVPAGVEGAIVGKALYAKAFTLEEALEAT----- 152 usage_00392.pdb 127 AFLAG---ADKVSINTAAVEN---------------- 144 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################