################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:17 2021 # Report_file: c_1261_386.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00209.pdb # 2: usage_02883.pdb # 3: usage_03384.pdb # 4: usage_03385.pdb # 5: usage_03386.pdb # 6: usage_03387.pdb # 7: usage_03773.pdb # 8: usage_04119.pdb # 9: usage_04265.pdb # 10: usage_04266.pdb # # Length: 38 # Identity: 1/ 38 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 38 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 38 ( 28.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00209.pdb 1 --HVGII-G----A-GIGGTCLAHGLRKHGIKVTIYER 30 usage_02883.pdb 1 ---VSVI-G----L-GA-GT-IAQVLLKQGKRVAIWNR 27 usage_03384.pdb 1 --QVTII-G----A-GLAGTLVARLLARNGWQVNLFER 30 usage_03385.pdb 1 --QVTII-G----A-GLAGTLVARLLARNGWQVNLFER 30 usage_03386.pdb 1 --QVTII-G----A-GLAGTLVARLLARNGWQVNLFER 30 usage_03387.pdb 1 --QVTII-G----A-GLAGTLVARLLARNGWQVNLFER 30 usage_03773.pdb 1 GVTYLYA-C-NSAKEHTFAQETAQLIAQQGWMQQVWYR 36 usage_04119.pdb 1 -QQIHFI-GI---G-GA-GSGIAEILLNEGYQISGSDI 31 usage_04265.pdb 1 -KTACVVGG----T-GFVASLLVKLLLQKGYAVNTTVR 32 usage_04266.pdb 1 -KTACVVGG----T-GFVASLLVKLLLQKGYAVNTTVR 32 g g l G r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################