################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:34 2021 # Report_file: c_1309_53.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00052.pdb # 2: usage_00053.pdb # 3: usage_00465.pdb # 4: usage_00587.pdb # 5: usage_00588.pdb # 6: usage_01234.pdb # 7: usage_01235.pdb # 8: usage_01308.pdb # 9: usage_01309.pdb # # Length: 41 # Identity: 24/ 41 ( 58.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 41 ( 61.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 41 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 --EHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRE- 38 usage_00053.pdb 1 --EHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRE- 38 usage_00465.pdb 1 --EHRRLARAIIELTYRHKVVKVMRPAADGRTVMDVISRE- 38 usage_00587.pdb 1 --EHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRED 39 usage_00588.pdb 1 --EHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRED 39 usage_01234.pdb 1 EEGHRTLALAVIKYTYQNKVVKVLRPAEGGKTVMDIISRQ- 40 usage_01235.pdb 1 EEGHRTLALAVIKYTYQNKVVKVLRPAEGGKTVMDIISRQ- 40 usage_01308.pdb 1 -GEHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRE- 39 usage_01309.pdb 1 --EHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISRE- 38 HR LA A I TY KVVKV RPA GkTVMD ISR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################