################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:33 2021 # Report_file: c_1075_35.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00193.pdb # 2: usage_00357.pdb # 3: usage_00422.pdb # 4: usage_00445.pdb # # Length: 80 # Identity: 12/ 80 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 80 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 80 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00193.pdb 1 --KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 58 usage_00357.pdb 1 ---IAQIKREISTMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLKED 57 usage_00422.pdb 1 --KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 58 usage_00445.pdb 1 VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP 60 rE m l Hp vk y k Yf L y GEL I g E usage_00193.pdb 59 CTRFYTAEIVSALEYLHGKG 78 usage_00357.pdb 58 EARKYFQQLINAVDYCHSRG 77 usage_00422.pdb 59 CTRFYTAEIVSALEYLHGKG 78 usage_00445.pdb 61 DAQRFFHQLMAGVVYLHGIG 80 r y a YlHg G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################