################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:17 2021 # Report_file: c_1077_61.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00044.pdb # 6: usage_00152.pdb # 7: usage_00153.pdb # 8: usage_00154.pdb # 9: usage_00299.pdb # 10: usage_00376.pdb # 11: usage_00478.pdb # 12: usage_00479.pdb # 13: usage_00480.pdb # 14: usage_00481.pdb # 15: usage_00482.pdb # 16: usage_00483.pdb # # Length: 64 # Identity: 1/ 64 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 64 ( 10.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 ----TARGASYTVREAAKALGM-DL-KGKTIAIQGYGNAG-YYMAKIMSE-EYGMKVVAV 52 usage_00041.pdb 1 ---ATARGASYTVREAAKALGM-DL-KGKTIAIQGYGNAG-YYMAKIMSE-EYGMKVVAV 53 usage_00042.pdb 1 ---ATARGASYTVREAAKALGM-DL-KGKTIAIQGYGNAG-YYMAKIMSE-EYGMKVVAV 53 usage_00043.pdb 1 ----TARGASYTVREAAKALGM-DL-KGKTIAIQGYGNAG-YYMAKIMSE-EYGMKVVAV 52 usage_00044.pdb 1 ----TARGASYTVREAAKALGM-DL-KGKTIAIQGYGNAG-YYMAKIMSE-EYGMKVVAV 52 usage_00152.pdb 1 ---ATARGASYTIREAAKVLGWDTL-KGKTIAIQGYGNAG-YYLAKIMSE-DFGMKVVAV 54 usage_00153.pdb 1 ----TARGASYTIREAAKVLGWDTL-KGKTIAIQGYGNAG-YYLAKIMSE-DFGMKVVAV 53 usage_00154.pdb 1 ---ATARGASYTIREAAKVLGWDTL-KGKTIAIQGYGNAG-YYLAKIMSE-DFGMKVVAV 54 usage_00299.pdb 1 GGTAAMAYIFESLKLNG----L-LK-AGDKVAIGMP---VFTPYIEIPELAQYALEEVAI 51 usage_00376.pdb 1 ---RTAAVSAIATKLLK------PPGS-DVLCILGAGVQA-YSHYEIFTE-QFSFKEVRM 48 usage_00478.pdb 1 ---ATAQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 53 usage_00479.pdb 1 ---ATAQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 53 usage_00480.pdb 1 ----TAQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 52 usage_00481.pdb 1 ---ATAQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 53 usage_00482.pdb 1 ---ATAQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 53 usage_00483.pdb 1 -----AQGAIFTIREAAKALGI-DL-KGKKIAVQGYGNAG-YYTAKLAKE-QLGMTVVAV 51 a a g y e Va usage_00040.pdb 53 SDT- 55 usage_00041.pdb 54 SDT- 56 usage_00042.pdb 54 SDT- 56 usage_00043.pdb 53 SDT- 55 usage_00044.pdb 53 SDT- 55 usage_00152.pdb 55 SDS- 57 usage_00153.pdb 54 SDS- 56 usage_00154.pdb 55 SDS- 57 usage_00299.pdb 52 NAD- 54 usage_00376.pdb 49 W-NR 51 usage_00478.pdb 54 SDS- 56 usage_00479.pdb 54 SDS- 56 usage_00480.pdb 53 SDS- 55 usage_00481.pdb 54 SDS- 56 usage_00482.pdb 54 SDS- 56 usage_00483.pdb 52 SDS- 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################