################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:40 2021 # Report_file: c_0906_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00206.pdb # 2: usage_00705.pdb # 3: usage_01103.pdb # 4: usage_01105.pdb # 5: usage_01108.pdb # 6: usage_01110.pdb # # Length: 57 # Identity: 4/ 57 ( 7.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 57 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 57 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00206.pdb 1 GEHYLKVHSWPPPTEGEIKTTFEPIATTPVVIVHGSKSVDNKSGELIYSNEATYFIR 57 usage_00705.pdb 1 -SQGIRLHA-PLPAAGKLSVVTEVADIQDAIVVLRGRGCDPESGSLVAETLTTLVL- 54 usage_01103.pdb 1 GEQYLELYK-PLPRAGKLKCEAVVADVL-VVIIMDVYSYS--EKELICHNQFSLFL- 52 usage_01105.pdb 1 GEQYLELYK-PLPRAGKLKCEAVVADV--VVIIMDVYSYS--E--LICHNQFS---- 46 usage_01108.pdb 1 GEQYLELYK-PLPRAGKLKCEAVVADVL-VVIIMDVYSYS--EKELICHNQFSLFL- 52 usage_01110.pdb 1 -EQYLELYK-PLPRAGKLKCEAVVADVL--VIIMDVYSYS--EKELICHNQFSLFL- 50 eqyl l PlP aGklk vad vi s Li n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################