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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:44:13 2021
# Report_file: c_0164_3.html
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#====================================
# Aligned_structures: 12
#   1: usage_00001.pdb
#   2: usage_00007.pdb
#   3: usage_00008.pdb
#   4: usage_00009.pdb
#   5: usage_00012.pdb
#   6: usage_00023.pdb
#   7: usage_00027.pdb
#   8: usage_00050.pdb
#   9: usage_00063.pdb
#  10: usage_00075.pdb
#  11: usage_00076.pdb
#  12: usage_00088.pdb
#
# Length:        159
# Identity:       18/159 ( 11.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     36/159 ( 22.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           28/159 ( 17.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  -QQIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   55
usage_00007.pdb         1  -QQIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   55
usage_00008.pdb         1  GQQIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   56
usage_00009.pdb         1  --QIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   54
usage_00012.pdb         1  GQQIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   56
usage_00023.pdb         1  --KQHMYDRVFDGNAT----QDDVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGA   54
usage_00027.pdb         1  KPVSFELDKVFSPQAS----QQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGT   56
usage_00050.pdb         1  --QIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV   54
usage_00063.pdb         1  --QIFSFDQVFHPLSS----QSDIFEMVSPLIQSALDGYNICIFAYGQSGSGKTYTMDGV   54
usage_00075.pdb         1  QVHEFKFDKIFDQQDT----NVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNP   56
usage_00076.pdb         1  QVIPFKFDKIFDQQET----NDEIFKEVGQLIQSSLDGYNVCIFAYGQTGSGKTYTMLNP   56
usage_00088.pdb         1  ETLKYQFDAFYGERSTQQDI---YAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGS   57
                                  D  f             f  v  l  s  dG N  ifAYGqtG GKT Tm   

usage_00001.pdb        56  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  110
usage_00007.pdb        56  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  110
usage_00008.pdb        57  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  111
usage_00009.pdb        55  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  109
usage_00012.pdb        57  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  111
usage_00023.pdb        55  DSNPGLTPRAMSELFRIMKKDSN---KFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDI  111
usage_00027.pdb        57  AENPGINQRALQLLFSEVQEKAS---DWEYTITVSAAEIYNEVLRDLLGKE--PQEKLEI  111
usage_00050.pdb        55  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  109
usage_00063.pdb        55  PESVGVIPRTVDLLFDSIRGYRN--LGWEYEIKATFLEIYNEVLYDLLSN---EQKDMEI  109
usage_00075.pdb        57  G--DGIIPSTISHIFNWINKLKT--KGWDYKVNAEFIEIYNENIVDLLRS--SIGLKHEI  110
usage_00076.pdb        57  G--DGIVPATINHIFSWIDKLAA--RGWSYKVSCEFIEIYNENIVDLLRS-----SKHEI  107
usage_00088.pdb        58  PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDP---ASGDLVI  114
                               G  p      f            w         EiY e   DLL           I

usage_00001.pdb       111  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNR--  147
usage_00007.pdb       111  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKM----  145
usage_00008.pdb       112  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRA-  149
usage_00009.pdb       110  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRA-  147
usage_00012.pdb       112  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNR--  148
usage_00023.pdb       112  KKDS-K-GMVSVENVTVVSISTYEELKTIIQRGSEQ-R-  146
usage_00027.pdb       112  RLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTT  150
usage_00050.pdb       110  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNR--  146
usage_00063.pdb       110  RMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMN---  145
usage_00075.pdb       111  RHDQE-TKTTTITNVTSVKLESEEMVEIILKKA------  142
usage_00076.pdb       108  RHDQE-LKTTYITNITTCVLDSRDTVDKVLKRANKL---  142
usage_00088.pdb       115  REDC--RGNILIPGLSQKPISSFADFERHFLPASR----  147
                           r              t                       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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