################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:56 2021 # Report_file: c_1124_23.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00050.pdb # 2: usage_00226.pdb # 3: usage_00389.pdb # 4: usage_00410.pdb # 5: usage_00411.pdb # 6: usage_00420.pdb # 7: usage_00421.pdb # 8: usage_00461.pdb # 9: usage_00495.pdb # 10: usage_00519.pdb # 11: usage_00524.pdb # 12: usage_00557.pdb # # Length: 75 # Identity: 7/ 75 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 75 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 75 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 GDDRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 58 usage_00226.pdb 1 ---RELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 55 usage_00389.pdb 1 ---RELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 55 usage_00410.pdb 1 --DRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 56 usage_00411.pdb 1 -DDRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 57 usage_00420.pdb 1 ---RRTQIIKVATELFREKGYY--ATSLDDIADRIGFTKPAIYYYFKSKEDVLFAIVNSI 55 usage_00421.pdb 1 ---RRTQIIKVATELFREKGYY--ATSLDDIADRIGFTKPAIYYYFKSKEDVLFAIVNSI 55 usage_00461.pdb 1 GDDRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 58 usage_00495.pdb 1 ---ARDLLLQTASNIREGD---VVDISLSELSLRSGLNSALVKYYFGNKAGLLKALLDRD 54 usage_00519.pdb 1 -DDRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 57 usage_00524.pdb 1 --DRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 56 usage_00557.pdb 1 -DDRELAILATAENLLEDRPLA--DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 57 r i A l S dd a G p y YF sKe vL usage_00050.pdb 59 VNQ-ADMALQTLAE- 71 usage_00226.pdb 56 VNQ-ADMALQTLAE- 68 usage_00389.pdb 56 VNQ-ADMALQTLAE- 68 usage_00410.pdb 57 VNQ-ADMALQTLAEN 70 usage_00411.pdb 58 VNQ-ADMALQTLAEN 71 usage_00420.pdb 56 VDE-ALERFHAIAAG 69 usage_00421.pdb 56 VDE-ALERFHAIAAG 69 usage_00461.pdb 59 VNQ-ADMALQTLAE- 71 usage_00495.pdb 55 --ENIVKSVDALL-- 65 usage_00519.pdb 58 VNQ-ADMALQTLA-- 69 usage_00524.pdb 57 VNQ-ADMALQTLAEN 70 usage_00557.pdb 58 VNQ-ADMALQTLAEN 71 a a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################