################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:49 2021 # Report_file: c_1218_122.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00301.pdb # 2: usage_00352.pdb # 3: usage_00487.pdb # 4: usage_00513.pdb # 5: usage_00648.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 51 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 51 ( 49.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00301.pdb 1 ---MVDFKMTKE---GLVLLIKDY---QN---LEEVLNAI--SARITQMG- 36 usage_00352.pdb 1 ---FGYTGTYKG---KRVSVQG-T--G-GIPSASI---YI--HELV-QFYG 35 usage_00487.pdb 1 --MLGFTGTYKG---KRVSVQG-T--GMGVPSISI---YV--NELI-QSYG 37 usage_00513.pdb 1 --EIDFYEAFM----EEPVTIPG-KP-N----SEE---EI--VNFV-EEH- 32 usage_00648.pdb 1 CLVATGTHE-P-KNQSYMVRGC-A--------TAS---MCQHAHLG-DAFS 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################