################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:42 2021 # Report_file: c_1469_31.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00072.pdb # 6: usage_00111.pdb # 7: usage_00115.pdb # 8: usage_00201.pdb # 9: usage_00249.pdb # 10: usage_00250.pdb # 11: usage_00287.pdb # 12: usage_00288.pdb # 13: usage_00289.pdb # 14: usage_00314.pdb # 15: usage_00323.pdb # 16: usage_00324.pdb # 17: usage_00453.pdb # 18: usage_00467.pdb # 19: usage_00468.pdb # 20: usage_00510.pdb # 21: usage_00528.pdb # 22: usage_00601.pdb # 23: usage_00704.pdb # 24: usage_00758.pdb # 25: usage_00910.pdb # 26: usage_00931.pdb # 27: usage_00992.pdb # 28: usage_01038.pdb # # Length: 29 # Identity: 17/ 29 ( 58.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 29 ( 58.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 29 ( 34.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00005.pdb 1 ----QESVKEFLAKAKEDFLKKWENPAQN 25 usage_00006.pdb 1 KKGEQESVKEFLAKAKEDFLKKWENPAQN 29 usage_00007.pdb 1 --GEQESVKEFLAKAKEDFLKKWENPAQN 27 usage_00072.pdb 1 ------SVKEFLAKAKEDFLKKWETPSQN 23 usage_00111.pdb 1 --------KEFLAKAKEDFLKKWETPSQN 21 usage_00115.pdb 1 KGSEQESVKEFLAKAKEDFLKKWENPAQN 29 usage_00201.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00249.pdb 1 -----ESVKEFLAKAKEDFLKKWETPSQN 24 usage_00250.pdb 1 --------KEFLAKAKEDFLKKWETPSQN 21 usage_00287.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_00288.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_00289.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_00314.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00323.pdb 1 ---------EFLAKAKEDFLKKWENPAQN 20 usage_00324.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_00453.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00467.pdb 1 -------VKEFLAKAKEDFLKKWENPAQN 22 usage_00468.pdb 1 -------VKEFLAKAKEDFLKKWENPAQN 22 usage_00510.pdb 1 --SEQESVKEFLAKAKEDFLKKWETPSQN 27 usage_00528.pdb 1 ----------FLAKAKEDFLKKWENPAQN 19 usage_00601.pdb 1 ----QESVKEFLAKAKEDFLKKWESPAQN 25 usage_00704.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00758.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_00910.pdb 1 -------VKEFLAKAKEDFLKKWETPSQN 22 usage_00931.pdb 1 ---EQESVKEFLAKAKEDFLKKWENPAQN 26 usage_00992.pdb 1 ------SVKEFLAKAKEDFLKKWENPAQN 23 usage_01038.pdb 1 -------VKEFLAKAKEDFLKKWETPSQN 22 FLAKAKEDFLKKWE P QN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################