################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:55 2021 # Report_file: c_0607_20.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00169.pdb # 2: usage_00207.pdb # 3: usage_00208.pdb # 4: usage_00209.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # # Length: 126 # Identity: 26/126 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/126 ( 30.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/126 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00169.pdb 1 -PQHRLLLETAWEAVEHSGLNPAGLAGS-----ATGVFMGLTHNTSF------------- 41 usage_00207.pdb 1 -PQHRIFLQEGYKAFEDAGYNARTLNEK-----KCGVYLGIMSN---EYGVML------- 44 usage_00208.pdb 1 -PQHRIFLQEGYKAFEDAGYNARTLNEK-----KCGVYLGIMSN---EYGVML------- 44 usage_00209.pdb 1 -PQHRIFLQEGYKAFEDAGYNARTLNEK-----KCGVYLGIMSN---EYGVMLNRQ---- 47 usage_00221.pdb 1 DPQERLFLQCVYETMEDAGYTRKK-LTEK---SNVGVYVGVMYE---EYQLYGAEEKSLA 53 usage_00222.pdb 1 DPQERLFLQCVYETMEDAGYTRKK-LTEKSGDLNVGVYVGVMYE---EYQLYGAEE---- 52 PQ R fLq y EdaGy GVy G m usage_00169.pdb 42 -----------SLASGRIAYALGVHGPAITVDTACS-SSLSAIHMACRSLHDGESDVALA 89 usage_00207.pdb 45 ------TGNSFAIAAARIPYFLNLKGPAIPIDTA-SSSSLVGTHLARQALINKEIDMALV 97 usage_00208.pdb 45 -------GNSFAIAAARIPYFLNLKGPAIPIDTA-SSSSLVGTHLARQALINKEIDMALV 96 usage_00209.pdb 48 -----STGNSFAIAAARIPYFLNLKGPAIPIDTA-SSSSLVGTHLARQALINKEIDMALV 101 usage_00221.pdb 54 LT------GNPSSIANRASYVFGFNGPSMALDTM-CSSSLTAIHLACQSLRNGECEAAFA 106 usage_00222.pdb 53 --QAR---GNPSSIANRASYVFGFNGPSMALDTM-CSSSLTAIHLACQSLRNGECEAAFA 106 a R Y GP DT SSL HlA q L n E A usage_00169.pdb 90 GGVSVL 95 usage_00207.pdb 98 GGVSLY 103 usage_00208.pdb 97 GGVSLY 102 usage_00209.pdb 102 GGVSLY 107 usage_00221.pdb 107 GGVNVS 112 usage_00222.pdb 107 GGVNVS 112 GGV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################