################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:15:45 2021 # Report_file: c_0710_23.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00005.pdb # 2: usage_00015.pdb # 3: usage_00023.pdb # 4: usage_00038.pdb # 5: usage_00064.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00078.pdb # 10: usage_00091.pdb # 11: usage_00149.pdb # 12: usage_00160.pdb # 13: usage_00227.pdb # 14: usage_00253.pdb # 15: usage_00258.pdb # 16: usage_00272.pdb # 17: usage_00273.pdb # 18: usage_00295.pdb # 19: usage_00310.pdb # # Length: 61 # Identity: 31/ 61 ( 50.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 61 ( 50.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 61 ( 29.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQA 60 usage_00015.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00023.pdb 1 ---------GCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS 51 usage_00038.pdb 1 GSHTIQRMRGCEVGSDGRLLRGYQQVAYDGRDYIALNEDLKTWTAADMAALITKHKWEQA 60 usage_00064.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00068.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00069.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00070.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00078.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00091.pdb 1 GSHTFQRMFGCDVGSDWRLLRGYHQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQA 60 usage_00149.pdb 1 -THTLQWMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 59 usage_00160.pdb 1 --------SGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA 52 usage_00227.pdb 1 GSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA 60 usage_00253.pdb 1 GTHTLQRMYGCDVGSDGRLLRGYEQFAYDGCDYIALNEDLRTWTAADMAAQITRRKWEQA 60 usage_00258.pdb 1 -SHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS 59 usage_00272.pdb 1 ----------CKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQA 50 usage_00273.pdb 1 ----------CKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQA 50 usage_00295.pdb 1 ---------GCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS 51 usage_00310.pdb 1 GSHTIQVISGCEV-------RGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA 53 C RGY Q AY G DYIALNEDL TWTAAD AA IT KWEQ usage_00005.pdb - usage_00015.pdb - usage_00023.pdb 52 G 52 usage_00038.pdb - usage_00064.pdb - usage_00068.pdb 61 G 61 usage_00069.pdb 61 G 61 usage_00070.pdb 61 G 61 usage_00078.pdb - usage_00091.pdb - usage_00149.pdb 60 G 60 usage_00160.pdb - usage_00227.pdb - usage_00253.pdb 61 G 61 usage_00258.pdb 60 G 60 usage_00272.pdb - usage_00273.pdb - usage_00295.pdb 52 G 52 usage_00310.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################