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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:09:33 2021
# Report_file: c_0778_33.html
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#====================================
# Aligned_structures: 9
#   1: usage_00029.pdb
#   2: usage_00030.pdb
#   3: usage_00199.pdb
#   4: usage_00200.pdb
#   5: usage_00254.pdb
#   6: usage_00255.pdb
#   7: usage_00604.pdb
#   8: usage_00605.pdb
#   9: usage_00606.pdb
#
# Length:         63
# Identity:       56/ 63 ( 88.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     56/ 63 ( 88.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            7/ 63 ( 11.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00029.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00030.pdb         1  RPFIDVKIK---E-IRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   56
usage_00199.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00200.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00254.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00255.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00604.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00605.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
usage_00606.pdb         1  RPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT   60
                           RPFIDVKIK   E IRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDT

usage_00029.pdb        61  WR-   62
usage_00030.pdb        57  WR-   58
usage_00199.pdb        61  WR-   62
usage_00200.pdb        61  WRI   63
usage_00254.pdb        61  WR-   62
usage_00255.pdb        61  WR-   62
usage_00604.pdb            ---     
usage_00605.pdb        61  WR-   62
usage_00606.pdb        61  WR-   62
                              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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