################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:28 2021 # Report_file: c_0177_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00083.pdb # 2: usage_00084.pdb # 3: usage_00157.pdb # 4: usage_00158.pdb # 5: usage_00159.pdb # 6: usage_00194.pdb # 7: usage_00254.pdb # # Length: 173 # Identity: 59/173 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/173 ( 42.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/173 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 --KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG--ALLFRA 56 usage_00084.pdb 1 --KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG--ALLFRA 56 usage_00157.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00158.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00159.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00194.pdb 1 -RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPC 59 usage_00254.pdb 1 -KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 59 MG N RS f A L GA Y ER r e ekL e L a l usage_00083.pdb 57 DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 116 usage_00084.pdb 57 DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 116 usage_00157.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00158.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00159.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00194.pdb 60 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSL 119 usage_00254.pdb 60 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 119 DV DeE F G d H IAFA E Gr T R LLA S YSL usage_00083.pdb 117 VAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE- 168 usage_00084.pdb 117 VAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE- 168 usage_00157.pdb 121 TIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD- 172 usage_00158.pdb 121 TIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD- 172 usage_00159.pdb 121 TIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD- 172 usage_00194.pdb 120 TAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADL 172 usage_00254.pdb 120 TIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD- 171 Va A l EGG IV TY E v YNVM AKA LeA V YLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################