################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:50 2021 # Report_file: c_1126_60.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00003.pdb # 2: usage_00006.pdb # 3: usage_00021.pdb # 4: usage_00139.pdb # 5: usage_00180.pdb # 6: usage_00290.pdb # 7: usage_00291.pdb # 8: usage_00292.pdb # 9: usage_00293.pdb # 10: usage_00323.pdb # 11: usage_00382.pdb # 12: usage_00445.pdb # 13: usage_00484.pdb # 14: usage_00545.pdb # # Length: 92 # Identity: 1/ 92 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 92 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 92 ( 47.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----------SAEAWYNLGNAYYKQG--DYDEAIEYYQKALELDPN----NAEAWYNLGN 44 usage_00006.pdb 1 ------------EAWYNLGNAYYKQG--DYDEAIEYYQKALELDPR----SAEAWYNLGN 42 usage_00021.pdb 1 -----------PETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPD----NPEFNIGYAI 45 usage_00139.pdb 1 ----------DVEKHLELGKKLLAAG--QLADALSQFHAAVDGDPD----NYIAYYRRAT 44 usage_00180.pdb 1 GKYQDMALAVKNPCHLNIAACLIKLK--RYDEAIGHCNIVLTEEEK----NPKALFRRGK 54 usage_00290.pdb 1 ---------NSAEAWKNLGNAYYKQG--DYQKAIEYYQKALELDPN----NASAWYNLGN 45 usage_00291.pdb 1 ------------SAWYNLGNAYYKQG--DYQKAIEYYQKALELDPN----NAKAWYRRGN 42 usage_00292.pdb 1 -------------AWYNLGNAYYKQG--DYQKAIEYYQKALELDPN----NAKAWYRRGN 41 usage_00293.pdb 1 ------------SAWYNLGNAYYKQG--DYQKAIEYYQKALELDPN----NAKAWYRRGN 42 usage_00323.pdb 1 ------------------WKNALSEG--QLQQALELLIEAIKASPK----DASLRSSFIE 36 usage_00382.pdb 1 ------------EPWVVSGCHSFYSK--RYSRALYLGAKAIQLNSN----SVQALLLKGA 42 usage_00445.pdb 1 ------KDVLLAITLSNMGSIYYKKG--KYQQAKKYYLDSLQLQKQIDLNYLDTIYEMAL 52 usage_00484.pdb 1 --------------EFRYADFLFKNN--NYAEAIEVFNKLEAKKYN----SPYIYNRRAV 40 usage_00545.pdb 1 ---------SQFEKQKEQGNSLFKQG--LYREAVHCYDQLITAQPQ----NPVGYSNKA- 44 A usage_00003.pdb 45 AYYKQG-------DYDEAIEYYQKALE----- 64 usage_00006.pdb 43 AYYKQG-------DYDEAIEYYQKALELD--- 64 usage_00021.pdb 46 TVYRLDDSDREGSVKSFSLGPLRKAVTLN--- 74 usage_00139.pdb 45 VFLA-G-------KSKAALPDLTKVIALK--- 65 usage_00180.pdb 55 AKAELG-------QMDSARDDFRKAQ------ 73 usage_00290.pdb 46 AYYKQG-------DYQKAIEY----------- 59 usage_00291.pdb 43 AYYKQG-------DYQKAIEDYQKALELD--- 64 usage_00292.pdb 42 AYYKQG-------DYQKAIEDYQKALELD--- 63 usage_00293.pdb 43 AYYKQG-------DYQKAIEDYQKALELD--- 64 usage_00323.pdb 37 LLCIDG-------DFERADEQLQSIK--L--- 56 usage_00382.pdb 43 ALRNMG-------RVQEAIIHFREAIRLA--- 64 usage_00445.pdb 53 VCIKLE-------ELEEARTLIDKGIDAAKQE 77 usage_00484.pdb 41 CYYELA-------KYDLAQKDIETYFSK---- 61 usage_00545.pdb 45 ALIKLG-------EYTQAIQC-QQGLRYT--- 65 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################