################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:41 2021 # Report_file: c_1208_140.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00264.pdb # 2: usage_00344.pdb # 3: usage_01331.pdb # 4: usage_01428.pdb # 5: usage_01429.pdb # 6: usage_01430.pdb # 7: usage_01431.pdb # 8: usage_01432.pdb # 9: usage_01433.pdb # 10: usage_02251.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 48 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 48 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00264.pdb 1 DVL------VLLTSW--RKAGDSHR-ELVI-LG--DSNVVRELIERV- 35 usage_00344.pdb 1 ------D----RPWGD-E-K---PHSTMVFIGIQLPEEEIRAAFAGL- 32 usage_01331.pdb 1 ---------ATVQVD--L----TSKKVT-ITSAL-GEEQLRTAIASAG 31 usage_01428.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAMEAV- 31 usage_01429.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAMEA-- 30 usage_01430.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAMEAV- 31 usage_01431.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAME--- 29 usage_01432.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAME--- 29 usage_01433.pdb 1 ---------IVYELD--K-NLKPIK-PMQF-LG--DEETVRKAMEAV- 31 usage_02251.pdb 1 -FVQSLDKN------FMV-PVGG---AIIA-GF--NDSFIQEISKM-- 32 r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################