################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:26 2021 # Report_file: c_1434_152.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00261.pdb # 2: usage_03114.pdb # 3: usage_03115.pdb # 4: usage_03116.pdb # 5: usage_03117.pdb # 6: usage_03118.pdb # 7: usage_03119.pdb # 8: usage_03121.pdb # 9: usage_03122.pdb # 10: usage_03123.pdb # # Length: 103 # Identity: 44/103 ( 42.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/103 ( 42.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/103 ( 27.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 SQEKRFLEMRKIAKTEKASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 60 usage_03114.pdb 1 -----------------ASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 43 usage_03115.pdb 1 -----------------ASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 43 usage_03116.pdb 1 -----------------ASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 43 usage_03117.pdb 1 -----------------ASKAISDISLEVDRLGGRVSAFEMVTK----IAEKDLVTVIEL 39 usage_03118.pdb 1 -----------------ASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 43 usage_03119.pdb 1 ----------------SASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIEL 44 usage_03121.pdb 1 --------------PGSSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEM 46 usage_03122.pdb 1 ----------------SSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEM 44 usage_03123.pdb 1 -----------------SSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEM 43 SKAISDIS V RL G SAF V EK L E usage_00261.pdb 61 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKN- 102 usage_03114.pdb 44 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVK-- 84 usage_03115.pdb 44 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKN- 85 usage_03116.pdb 44 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALK---- 82 usage_03117.pdb 40 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALK---- 78 usage_03118.pdb 44 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALK---- 82 usage_03119.pdb 45 LMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDAL----- 82 usage_03121.pdb 47 LMNQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIK-- 87 usage_03122.pdb 45 LMNQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIKN- 86 usage_03123.pdb 44 LMNQLVKLDAIS--GDVKLKKKMQEERLHKYVEALDLLKIKNS 84 LMN L KLDAI GDVKL KMQ R YVE LD L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################