################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:22 2021 # Report_file: c_1226_20.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00109.pdb # 2: usage_00110.pdb # 3: usage_00111.pdb # 4: usage_00112.pdb # 5: usage_00113.pdb # 6: usage_00114.pdb # 7: usage_00115.pdb # 8: usage_00116.pdb # 9: usage_00123.pdb # 10: usage_00124.pdb # 11: usage_01310.pdb # 12: usage_01416.pdb # # Length: 50 # Identity: 2/ 50 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 50 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 50 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 -----GSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 45 usage_00110.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00111.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00112.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00113.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00114.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00115.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00116.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00123.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_00124.pdb 1 KLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQ 50 usage_01310.pdb 1 -----GEPLIQFNSFN--PGPL---RFVNYFEKHVAGSELNFCIAVVRNH 40 usage_01416.pdb 1 -----LNIDVLISVDS--IPREG-SVNVKDLRPRFGGTAGNFAIVAQKFR 42 g pr gG N a aa r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################