################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:55 2021 # Report_file: c_1256_248.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00315.pdb # 2: usage_00316.pdb # 3: usage_02577.pdb # 4: usage_02880.pdb # 5: usage_03444.pdb # 6: usage_03445.pdb # 7: usage_04239.pdb # 8: usage_04240.pdb # # Length: 50 # Identity: 4/ 50 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 50 ( 18.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 50 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00315.pdb 1 --GVKASGGIHSREEALAMIDAG----A--------SRM-------GV-S 28 usage_00316.pdb 1 --GVKASGGIHSREEALAMIDAG----A--------SRM-------GV-S 28 usage_02577.pdb 1 KIGLKVSGGISDLNTASHYILLA----RRFLFRIGS-------------- 32 usage_02880.pdb 1 --GFIPVGGVRTAEDAQKYLAIADELFG--------ADWADARHYAFGA- 39 usage_03444.pdb 1 --GVKASGGIRTFEDAVK-I-YG----A--------DRI-------GT-- 25 usage_03445.pdb 1 -EGVKASGGIRTFEDAVK-I-YG----A--------DRI-------GT-- 26 usage_04239.pdb 1 --GVKASGGIRTFEDAVK-I-YG----A--------DRI-------GT-- 25 usage_04240.pdb 1 -EGVKASGGIRTFEDAVK-I-YG----A--------DRI-------GT-- 26 G k sGGi e A i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################