################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:21 2021 # Report_file: c_1166_66.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00408.pdb # 2: usage_00733.pdb # 3: usage_00734.pdb # 4: usage_00735.pdb # 5: usage_00736.pdb # 6: usage_00738.pdb # 7: usage_00739.pdb # 8: usage_00743.pdb # 9: usage_00744.pdb # 10: usage_00745.pdb # 11: usage_00746.pdb # 12: usage_00748.pdb # 13: usage_00749.pdb # 14: usage_01126.pdb # 15: usage_01235.pdb # 16: usage_01236.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 51 ( 19.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 51 ( 51.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00408.pdb 1 PQFVTVQQPS-------DGKMQRLFF---AKFLGTEE-----SLAVLRV-P 35 usage_00733.pdb 1 -CDWHVSTFKVQ-NLSGD-PMSRLDV---KQNA----PFAPHLGSIEFTSD 41 usage_00734.pdb 1 -CDWHVSTFKVDQNLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 40 usage_00735.pdb 1 -CDWHVSTFKVDQNLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 40 usage_00736.pdb 1 -CDWHVSTFKV---LSGD-PMSRLDV---KQNA----PFAPHLGSIEFTSD 39 usage_00738.pdb 1 -CDWHVSTFKVDQNLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 40 usage_00739.pdb 1 -CDWHVSTFKV--NLSGD-PMSRLDV---KQNA----PFAPHLGSIEFTSD 40 usage_00743.pdb 1 -CDWHVSTFKVD----GD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 36 usage_00744.pdb 1 -CDWHVSTFKV--DLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 38 usage_00745.pdb 1 -CDWHVSTFKV--NLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 38 usage_00746.pdb 1 -CDWHVSTFKV----SGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 36 usage_00748.pdb 1 -CDWHVSTFKVD-QLSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 39 usage_00749.pdb 1 -CDWHVSTFKV----SGD-PMSRLDV---KQNA----PFAPHLGSIEFTSD 38 usage_01126.pdb 1 ----LLTQTTK-----GDGSTRGHKATVYTGSA----PFTPKLGSVQFSTD 38 usage_01235.pdb 1 -CDWHVSTFKV---LSGD-PMSRLDV---KQNA----PFAPHLGSIEFTSD 39 usage_01236.pdb 1 -CDWHVSTFKVD--LSGD-PMSRLDV---KQNA----PFAPHLGSIEFT-- 38 v D m rl a lgs f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################