################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:09 2021 # Report_file: c_0170_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00007.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00041.pdb # # Length: 176 # Identity: 76/176 ( 43.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 136/176 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/176 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GKLVFLGLDNAGKTTLLHML-----------TSEELTI-A----GMTFTTF-DL-----R 38 usage_00031.pdb 1 GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR 59 usage_00032.pdb 1 GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR 59 usage_00033.pdb 1 GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR 59 usage_00041.pdb 1 GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR 59 GKLlFLGLDNAGKTTLLHML whptsee A kfTtfdl g R usage_00007.pdb 39 VWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISE 98 usage_00031.pdb 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119 usage_00032.pdb 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119 usage_00033.pdb 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119 usage_00041.pdb 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119 lWKdYfPevNGIVFLVDaADpeRfdEarVELdALfniaelkdVPfvILGNKIDapnAvSE usage_00007.pdb 99 EKLREIFGLYGQTTGKGNVTLKE---LNARPMEVFMCSVLKRQGYGEGFRWLSQYI 151 usage_00031.pdb 120 AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS--- 161 usage_00032.pdb 120 AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS--- 161 usage_00033.pdb 120 AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS--- 161 usage_00041.pdb 120 AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS--- 161 aeLRsalGLlnt egqRPvEVFMCSVvmRnGYlEaFqWLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################