################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:07:49 2021 # Report_file: c_0106_1.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00025.pdb # 10: usage_00026.pdb # 11: usage_00027.pdb # 12: usage_00028.pdb # 13: usage_00032.pdb # 14: usage_00033.pdb # 15: usage_00034.pdb # 16: usage_00036.pdb # 17: usage_00037.pdb # 18: usage_00068.pdb # 19: usage_00069.pdb # 20: usage_00070.pdb # 21: usage_00071.pdb # 22: usage_00076.pdb # 23: usage_00077.pdb # 24: usage_00078.pdb # 25: usage_00079.pdb # # Length: 170 # Identity: 36/170 ( 21.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/170 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/170 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 YNPIYRAGVRNFLAAAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00018.pdb 1 YNPIYRAGVRNFLAAAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00019.pdb 1 YNPIYRAGVRNFLAEAKASGVAGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00020.pdb 1 YNPIYRAGVRNFLAEAKASGVAGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00021.pdb 1 YNPIYRAGVRNFLAEAKASGVNGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00022.pdb 1 YNPIYRAGVRNFLAEAKASGVNGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00023.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPAER 60 usage_00024.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPAER 60 usage_00025.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIARAAGIKTVFLAAPNTPDER 60 usage_00026.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIARAAGIKTVFLAAPNTPDER 60 usage_00027.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00028.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00032.pdb 1 YNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKR 60 usage_00033.pdb 1 YNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKR 60 usage_00034.pdb 1 YKPIM-FR---SLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDR 56 usage_00036.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00037.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00068.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00069.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00070.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00071.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00076.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00077.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00078.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 usage_00079.pdb 1 YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 60 YnPI g f G G V DLP A e V L aP R usage_00017.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00018.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00019.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00020.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00021.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00022.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00023.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00024.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00025.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00026.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00027.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00028.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00032.pdb 61 IKLICEAADEMTYFVSV----TG----------YERIKKKVEEYRELCDKPVVVGFGVSK 106 usage_00033.pdb 61 IKLICEAADEMTYFVSVGA--R-----EKLP--YERIKKKVEEYRELCDKPVVVGFGVSK 111 usage_00034.pdb 57 MKEITKASEGFVYLVSV---NGVTGPR--A-NVNPRVESLIQEVKKVTNKPVAVGFGISK 110 usage_00036.pdb 61 LKVIDDMTTGFVYLVSL--Y-----------EIPKTAYDLLRRAKRICRNKVAVGFGVSK 107 usage_00037.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00068.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00069.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00070.pdb 61 LKVIDDMTTGFVYLVSL---YGT------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 110 usage_00071.pdb 61 LKVIDDMTTGFVYLVSL---YGT---T--E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 111 usage_00076.pdb 61 LKVIDDMTTGFVYLVSL--Y---------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 108 usage_00077.pdb 61 LKVIDDMTTGFVYLVSL--Y---------E-EIPKTAYDLLRRAKRICRNKVAVGFGVSK 108 usage_00078.pdb 61 LKVIDDMTTGFVYLVSL--Y-----------EIPKTAYDLLRRAKRICRNKVAVGFGVSK 107 usage_00079.pdb 61 LKVIDDMTTGFVYLVSL--------------EIPKTAYDLLRRAKRICRNKVAVGFGVSK 106 K I Y VS c V VGFGvSK usage_00017.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 155 usage_00018.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELL---- 155 usage_00019.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 155 usage_00020.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00021.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELL---- 154 usage_00022.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00023.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATE-------------- 144 usage_00024.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00025.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELL---- 154 usage_00026.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00027.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATE-------------- 144 usage_00028.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00032.pdb 107 KEHAREIGS-FADGVVVGSALVKLAGQK-----KIEDLGNLVKELKEGLR 150 usage_00033.pdb 112 KEHAREIGS-FADGVVVGSALVKLAGQK-----KIEDLGNLVKELKEGLR 155 usage_00034.pdb 111 PEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNALG 160 usage_00036.pdb 108 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 152 usage_00037.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 156 usage_00068.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATE-------------- 144 usage_00069.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELL---- 155 usage_00070.pdb 111 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEALLG--- 155 usage_00071.pdb 112 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEALLG--- 156 usage_00076.pdb 109 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATE-------------- 142 usage_00077.pdb 109 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATE-------------- 142 usage_00078.pdb 108 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 152 usage_00079.pdb 107 REHVVSLLKEGANGVVVGSALVKIIGEK--GREATEFLKKKVEELLG--- 151 EH A GVvvGSAlVk G k e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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