################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:56 2021 # Report_file: c_1413_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00011.pdb # 2: usage_00213.pdb # 3: usage_00214.pdb # 4: usage_00224.pdb # 5: usage_00497.pdb # 6: usage_00560.pdb # 7: usage_00835.pdb # 8: usage_00837.pdb # 9: usage_00848.pdb # 10: usage_00852.pdb # 11: usage_00862.pdb # 12: usage_00949.pdb # 13: usage_00997.pdb # 14: usage_01013.pdb # # Length: 84 # Identity: 31/ 84 ( 36.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 84 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 84 ( 32.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA------TSCSRRFYQL 54 usage_00213.pdb 1 TYEEFLCMKVLLLLSTVPKDGLKSQASFDEMRMNYIKELRRAIA---NNSSQNWQRFYQL 57 usage_00214.pdb 1 TYEEFLCMKVLLLLSTVPKDGLKSQASFDEMRMNYIKELRRAIA---NNSSQNWQRFYQL 57 usage_00224.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA--RKNPTSCSRRFYQL 58 usage_00497.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQL 60 usage_00560.pdb 1 TQEEFLCMKALLLLSTVPKEGLKSQASFDEMRMNYIKELNRAIAKKENNSAQNWQRFYQL 60 usage_00835.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA-------SCSRRFYQL 53 usage_00837.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA-------SCSRRFYQL 53 usage_00848.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA-------SCSRRFYQL 53 usage_00852.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA--------CSRRFYQL 52 usage_00862.pdb 1 -PQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA--------CSRRFYQL 51 usage_00949.pdb 1 TPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIA--------CSRRFYQL 52 usage_00997.pdb 1 TFEEYTIMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVT--------SWQRFYQL 52 usage_01013.pdb 1 -YEEYLCMKTLLLLSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQL 59 E lcMK LLL S P GLK Q FdE RmnYIKEL i RFYQL usage_00011.pdb 55 TKLLDSVQPIARELHQFTFDLLIK 78 usage_00213.pdb 58 TKLLDS------------------ 63 usage_00214.pdb 58 TKLLDS------------------ 63 usage_00224.pdb 59 TKLLDSVQPIARELYQFTFDLLIK 82 usage_00497.pdb 61 TKLLDSVQPIARELHQFTFDLLIK 84 usage_00560.pdb 61 TKLLDS------------------ 66 usage_00835.pdb 54 TKLLDSVQPIARELHQFTFDLLIK 77 usage_00837.pdb 54 TKLLDSVQPIARELHQFAFDLLIK 77 usage_00848.pdb 54 TKLLDSVQPIARELHQFAFDLLIK 77 usage_00852.pdb 53 TKLLDSVQPIARELHQFTFDLLIK 76 usage_00862.pdb 52 TKLLDSVQPIARELHQFTFDLLIK 75 usage_00949.pdb 53 TKLLDSVQPIARELHQFTFDLLIK 76 usage_00997.pdb 53 TKLLDSMHDLVSDLLEFCFYTFRE 76 usage_01013.pdb 60 TKLLDSMHDVVENLLSYCFQTFLD 83 TKLLDS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################