################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:32 2021 # Report_file: c_1240_78.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00432.pdb # 4: usage_00593.pdb # 5: usage_01829.pdb # 6: usage_01830.pdb # 7: usage_01831.pdb # 8: usage_01832.pdb # # Length: 33 # Identity: 2/ 33 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 33 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 33 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 ----PIISMAAGISLQRLATFV-GQDLPLLRIM 28 usage_00025.pdb 1 ---QPIISMAAGISLQRLATFV-GQDLPLLRIM 29 usage_00432.pdb 1 LVI----SLAVGVTTPLIEKWL-GKASRIVRA- 27 usage_00593.pdb 1 ---KVVFSGGAG--VDHVLTLPGLPDVPLVRF- 27 usage_01829.pdb 1 ----PI-ISAAGISLQRLATFV-GQDLPLLRI- 26 usage_01830.pdb 1 ---QPI-ISAAGISLQRLATFV-GQDLPLLRI- 27 usage_01831.pdb 1 ---QPI-ISAAGISLQRLATFV-GQDLPLLRI- 27 usage_01832.pdb 1 ---QPI-ISAAGISLQRLATFV-GQDLPLLRI- 27 aaG t g d pl R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################