################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:35 2021 # Report_file: c_0247_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00125.pdb # # Length: 140 # Identity: 123/140 ( 87.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/140 ( 87.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/140 ( 2.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 FCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKKHGPQQRLVTPSFVKGIQCVNN 60 usage_00008.pdb 1 FCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNN 60 usage_00009.pdb 1 FCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNN 60 usage_00010.pdb 1 FCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNN 60 usage_00011.pdb 1 FCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNN 60 usage_00125.pdb 1 FCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKKHGPQQRLVTPSFVKGIQCVNN 60 FCIVNAANEHM HG GVAKAIADFCG DFVEYC DYVKKHGPQQ LVTPSFVKGIQCVNN usage_00004.pdb 61 VVGPRHGDNNLHEKLVAAYKNVLVDGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEGCTI 120 usage_00008.pdb 61 VVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGIFGVDFKISIDAMREAFKGCAI 120 usage_00009.pdb 61 VVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGI-GVDFKISIDAMREAFKGCAI 119 usage_00010.pdb 61 VVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGIFGVDFKISIDAMREAFKGCAI 120 usage_00011.pdb 61 VVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGIFGVDFKISIDAMREAFKGCAI 120 usage_00125.pdb 61 VVGPRHGDNNLHEKLVAAYKNVLVDGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEGCTI 120 VVGPRHGD NL EKLVAAYK VLV GVVNYVVPVLS GI GVDFK SIDAMREAF GC I usage_00004.pdb 121 RVLLFSLSQEHIDYFDVTC- 139 usage_00008.pdb 121 RVLLFSLSQEHIDYFDATCK 140 usage_00009.pdb 120 RVLLFSLSQEHIDYFDATC- 138 usage_00010.pdb 121 RVLLFSLSQEHIDYFDAT-- 138 usage_00011.pdb 121 RVLLFSLSQEHIDYFDATCK 140 usage_00125.pdb 121 RVLLFSLSQEHIDYFDVTC- 139 RVLLFSLSQEHIDYFD T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################