################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:32 2021 # Report_file: c_1402_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00485.pdb # 2: usage_00486.pdb # 3: usage_00487.pdb # 4: usage_00488.pdb # 5: usage_00489.pdb # 6: usage_00490.pdb # 7: usage_00491.pdb # 8: usage_00492.pdb # 9: usage_00540.pdb # 10: usage_00634.pdb # 11: usage_01032.pdb # # Length: 90 # Identity: 43/ 90 ( 47.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 90 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 90 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00485.pdb 1 -PFAAIISNLMSETEALMRTIYS----------KDFGTQNYEHWIVVTQRKCRLL---DK 46 usage_00486.pdb 1 -PFAAIISNLMSETEALMRTI-------------DFGTQNYEHWIVVTQRKCRLLQLEDK 46 usage_00487.pdb 1 -PFAAIISNLMSETEALMRTI-------------DFGTQNYEHWIVVTQRKCRLLQLEDK 46 usage_00488.pdb 1 -PFAAIISNLMSETEALMRTI-------------DFGTQNYEHWIVVTQRKCRLLQLEDK 46 usage_00489.pdb 1 -PFAAIISNLMSETEALMRTI--------------FGTQNYEHWIVVTQRKCRLLQLEDK 45 usage_00490.pdb 1 -PFAAIISNLMSETEALMRTI-------------DFGTQNYEHWIVVTQRKCRLLQLEDK 46 usage_00491.pdb 1 -PFAAIISNLMSETEALMRTI-------------DFGTQNYEHWIVVTQRKCRLLQLEDK 46 usage_00492.pdb 1 -PFAAIISNLMSETEALMRTI--------------FGTQNYEHWIVVTQRKCR------- 38 usage_00540.pdb 1 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 60 usage_00634.pdb 1 -KFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACM------- 52 usage_01032.pdb 1 -KFKYIIAQLMRDTESLAKRICKD-L-E-------FGTQKYEQWIVTVQKACMVF---DK 47 F II LM TE L I FGTQ YE WIV Q C usage_00485.pdb 47 E-EESRICRALFICTEHLRKYNDALIISED 75 usage_00486.pdb 47 E-EESRICRALFICTEHLRKYNDALIISE- 74 usage_00487.pdb 47 E-EESRICRALFICTEHLRKYNDALIISE- 74 usage_00488.pdb 47 E-EESRICRALFICTEHLRKYNDALIISE- 74 usage_00489.pdb 46 E-EESRICRALFICTEHLRKYNDALIISE- 73 usage_00490.pdb 47 E-EESRICRALFICTEHLRKYNDALIISE- 74 usage_00491.pdb 47 E-EESRICRALFICTEHLRKYNDALIISE- 74 usage_00492.pdb 39 E-EESRICRALFICTEHLRKYNDALIISE- 66 usage_00540.pdb 61 D-EESRICKALFLYTSHLRKYNDALIISE- 88 usage_00634.pdb 53 -VEESRICKALFLYTSHLRKYNDALIISEH 81 usage_01032.pdb 48 D-EESRICKALFLYTSHLRKYNDALIISEH 76 EESRIC ALF T HLRKYNDALIISE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################