################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:49 2021 # Report_file: c_0472_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00036.pdb # 2: usage_00080.pdb # 3: usage_00081.pdb # 4: usage_00103.pdb # 5: usage_00104.pdb # 6: usage_00109.pdb # 7: usage_00111.pdb # # Length: 104 # Identity: 22/104 ( 21.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/104 ( 40.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/104 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 GLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKY 60 usage_00080.pdb 1 GLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKY 60 usage_00081.pdb 1 -LVVLGTATPDRLMPTTATVVADRLGIDGVPAYQLQSGCSGAVQALAVTRSLLLGGTART 59 usage_00103.pdb 1 DLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVSGFAYAVATADSFIRSGQHRT 60 usage_00104.pdb 1 DLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVSGFAYAVATADSFIRSGQHRT 60 usage_00109.pdb 1 GLIIVATTSSSHAFPSSACQVQRMLGIKDAASFDLAAACAGFTYALSVADQYVKSGAVKH 60 usage_00111.pdb 1 GLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAA-AGFTYALSVADQYVKSGAVKY 59 Li vaT fPs Ac q LGI a a Gf yA ad sG usage_00036.pdb 61 ALVVGSDVLARTCDPTD---------RGTIIIFGDGAGAAVLAA 95 usage_00080.pdb 61 ALVVGSDVLARTCDPTD---------RGTIIIFGDGAGAAVLAA 95 usage_00081.pdb 60 ALVLGGDVVARFYDLTADLRKLPPAEFVNYVLFGDGVGAAVLRV 103 usage_00103.pdb 61 ALVIGAETFSRILDFKD---------RTTCVLFGDGAGAVILQA 95 usage_00104.pdb 61 ALVIGAETFSRILDFKD---------RTTCVLFGDGAGAVILQA 95 usage_00109.pdb 61 AIVIGSDVLSRALDPED---------RGTIILFGDGAGAVVLGA 95 usage_00111.pdb 60 ALVVGSDVLARTCDPTD---------RGTIIIFGDGAGAAVLAA 94 AlV G R D d r t FGDGaGA L a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################