################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:51 2021 # Report_file: c_0403_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00026.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00052.pdb # 6: usage_00067.pdb # 7: usage_00068.pdb # 8: usage_00069.pdb # 9: usage_00070.pdb # 10: usage_00071.pdb # 11: usage_00072.pdb # 12: usage_00073.pdb # 13: usage_00075.pdb # # Length: 80 # Identity: 18/ 80 ( 22.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 80 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 80 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------DATVSSEGHLLLTNVK-GN--EEDSMGRAFYSAPIQINDRTIDNLASFSTNFTF 51 usage_00026.pdb 1 SIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTF 59 usage_00028.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00029.pdb 1 ------DATVSSKGQLRLTNVN---EPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 51 usage_00052.pdb 1 ------DALVNSAGTLELTAVA-AGAPVPDSLGRALYAAPIHIHDN--TTLASFTTSFSF 51 usage_00067.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00068.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00069.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00070.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00071.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00072.pdb 1 -LILQRDATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 59 usage_00073.pdb 1 ------DATVSSKGQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTF 54 usage_00075.pdb 1 ------DAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNF 54 DA v G L L v S GRA Ys Pi i D ASF t F F usage_00001.pdb 52 RINAKNIENSAYGLAFALVP 71 usage_00026.pdb 60 FLKITGNGPADGLAFFLAP- 78 usage_00028.pdb 55 NIDVPNNSGPADGLAFV--- 71 usage_00029.pdb 52 NIDVPNNSGPADGLAFV--- 68 usage_00052.pdb 52 VMAAPAAAAVADGLAFFLAP 71 usage_00067.pdb 55 NIDVPNNSGPADGLAFVLLP 74 usage_00068.pdb 55 NIDVPNNSGPADGLAFVLLP 74 usage_00069.pdb 55 NIDVPNNSGPADGLAFVLLP 74 usage_00070.pdb 55 NIDVPNNSGPADGLAFV--- 71 usage_00071.pdb 55 NIDVPNNSGPADGLAFVLLP 74 usage_00072.pdb 60 NIDVPNNSGPADGLAFVLLP 79 usage_00073.pdb 55 NIDVPNNSGPADGLAFVLLP 74 usage_00075.pdb 55 TFYAPDTKRLADGLAFFLAP 74 a glaF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################