################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:55 2021 # Report_file: c_0608_55.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00005.pdb # 3: usage_00141.pdb # 4: usage_00251.pdb # 5: usage_00310.pdb # 6: usage_00475.pdb # # Length: 78 # Identity: 9/ 78 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 78 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 78 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SPLEAALAWQASGAEWLHLVDLDAAFGTG-----DNRALVAEITGAMDIKVELSGGIRDD 55 usage_00005.pdb 1 TPLEAALNWQNDGAEWVHMVDLDAAF--G-----NNAALISDVVSQLNVKVELSGGLRDD 53 usage_00141.pdb 1 --LERAREMVAEGADILDLGAE-S-----EEEKRRLLPVLEAVLSLG-VPVSV--DTRKP 49 usage_00251.pdb 1 SPLEAALAWQRSGAEWLHLVDLDAAFGTG-----DNRALIAEVAQAMDIKVELSGGIRDD 55 usage_00310.pdb 1 SAVDAALGWQRDGAEWIHLVDLDAAFGRG-----SNHELLAEVVGKLDVQVELSGGIRDD 55 usage_00475.pdb 1 SPLEAALSWQRAGAEWLHLVDLDAAFGTG-----DNRELVRQVTEA-DIKVELSGGIRDD 54 leaAl wq GAew hlvdl a n l v Vel g Rdd usage_00001.pdb 56 ASLAAALATGCTRVNLGT 73 usage_00005.pdb 54 ESLERALELGVARVNLG- 70 usage_00141.pdb 50 EVAEEALKLGAHLLNDV- 66 usage_00251.pdb 56 DTLAAALATGCTRVNLG- 72 usage_00310.pdb 56 ESLAAALATGCARVNVG- 72 usage_00475.pdb 55 ASLAAALATGCTRVNLG- 71 l AL G rvN g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################