################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:00 2021 # Report_file: c_0697_37.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00125.pdb # 2: usage_00126.pdb # 3: usage_00127.pdb # 4: usage_00128.pdb # 5: usage_00135.pdb # 6: usage_00397.pdb # 7: usage_00499.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 47 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 47 ( 48.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 D--VIV-KN-CRLVSSDGI--------TEADILVKD--GKVAAISA- 32 usage_00126.pdb 1 D--VIV-KN-CRLVSSDGI--------TEADILVKD--GKVAAISA- 32 usage_00127.pdb 1 D--VIV-KN-CRLVSSDGI--------TEADILVKD--GKVAAISA- 32 usage_00128.pdb 1 D--VIV-KN-CRLVSSDGI--------TEADILVKD--GKVAAISA- 32 usage_00135.pdb 1 V--LESYRP---IFTGSLN--------TGSIDVRMQ----VTPVLAT 30 usage_00397.pdb 1 Y--LIIYKAP--LFEEDIT--------TTSLGIYIKNNLLLTIHS-- 33 usage_00499.pdb 1 -QIVEQ-GQ-LESSCEI--KVGDNLVEKQVAIVVRD--GVIQSIEE- 39 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################