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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:16:12 2021
# Report_file: c_0581_28.html
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#====================================
# Aligned_structures: 5
#   1: usage_00111.pdb
#   2: usage_00357.pdb
#   3: usage_00358.pdb
#   4: usage_00359.pdb
#   5: usage_00360.pdb
#
# Length:        114
# Identity:       18/114 ( 15.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     70/114 ( 61.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           43/114 ( 37.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00111.pdb         1  ----VFFSDIVSFSTFA-EKLPVEEVVSVVNSYFSVCTAIITRQGGEVTKFIGDCVMAYF   55
usage_00357.pdb         1  --ASVLFADIVGFT-ERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIKVSGDSYMVVS   57
usage_00358.pdb         1  --ASVLFADIVGFT-------D--L-VRFLDRLYSAFDELVDQHGLEKIKVSGDSYMVVS   48
usage_00359.pdb         1  DEASVLFADIV-----------PA-LVRFLDRLYSAFDELVDQHGLEKIK--GDSYMVVS   46
usage_00360.pdb         1  --ASVLFADIV----------------RFLDRLYSAFDELVDQHGLEKIKVSGDSYMVVS   42
                               VlFaDIV                rfldrlySafdelvdqhGlEkiK  GDsyMvvs

usage_00111.pdb        56  D----GD-CADQAIQASLDILMELEILRNSAPEGSPLR----V-LYSGIGLAK-   98
usage_00357.pdb        58  GVPRPRPDHTQALADFALDMTNVAAQLK----------DPRGNPVPLRVGLAT-  100
usage_00358.pdb        49  GVPRPRPDHTQALADFALDMTNVAAQLK----------DPRGNPVPLRVGLAT-   91
usage_00359.pdb        47  GVPRPRPDHTQALADFALDMTNVAAQLK----------DPRNP-VPLRVGLATG   89
usage_00360.pdb        43  GVPRPRPDHTQALADFALDMTNVAAQLK----------DRGNP-VPLRVGLAT-   84
                           g    rp htqaladfaLDmtnvaaqLk                vplrvGLAt 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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