################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:33 2021 # Report_file: c_0905_179.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00939.pdb # 2: usage_00940.pdb # 3: usage_01018.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 66 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 66 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00939.pdb 1 LPQIHL-----EGNRLVLTCLAE--------------GSWPLEFKWIRNDSELTTYSSEY 41 usage_00940.pdb 1 RTQVHL-----EGNRLVLTCMAE--------------GSWPLEFKWLHNNRELTRFSLEY 41 usage_01018.pdb 1 HVGVRVKSTGK-LVAFIAATPVTFKLNKSNKVIDSVE----------------------I 37 qvhl gnrlvltc ae y usage_00939.pdb 42 KYIIPS 47 usage_00940.pdb 42 RYMITS 47 usage_01018.pdb 38 NFLCIH 43 y i s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################