################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:54 2021 # Report_file: c_0395_81.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00243.pdb # 2: usage_00414.pdb # 3: usage_00415.pdb # 4: usage_00490.pdb # 5: usage_00576.pdb # 6: usage_00582.pdb # # Length: 125 # Identity: 4/125 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/125 ( 8.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/125 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00243.pdb 1 DPTMIKEGSSWYALGTGL---------TEERGLRVLKSSDAKNWTVQ-KS-IF------- 42 usage_00414.pdb 1 DPYVLKHESRYYLYATSA---------IN-RGFKVWESPNLVDWELK-GL-AL------- 41 usage_00415.pdb 1 DPYVLKHESRYYLYATSA---------IN-RGFKVWESPNLVDWELK-GL-AL------- 41 usage_00490.pdb 1 TPDILVWKGKYYLYYQAFNEPSGLRGD-W-CPVSVSYADSPDGPWTHGGDSVI------- 51 usage_00576.pdb 1 DPSIIKVGNMYYVFGTH---------------LQV-AKSDLMHWEQI-NT--SAHDKNPI 41 usage_00582.pdb 1 DPVMTREGDTWYLFSTGP-------------GITIYSSKDRVNWRYS-DR-AF------- 38 dP Y t v w usage_00243.pdb 43 --TTPLSW---WS------NYVPNYGQNQWAPDIQYY-NGKYWLYYSVS-SFGSNTSAIG 89 usage_00414.pdb 42 --DS---Y---YEKN----GWG---TEDFWAPEVIFY-NNKFYMTYSARDNDG--HLKIA 83 usage_00415.pdb 42 --DS---Y---YEKN----GWG---TEDFWAPEVIFY-NNKFYMTYSARDNDG--HLKIA 83 usage_00490.pdb 52 --PF---GKKG--------EWD---QDATHDPQPIVY-KGKIHLYYKAAYN----KYAVG 90 usage_00576.pdb 42 IP-NI------NEELKETLSWA-RTRNDIWAPQVIQLSDGRYYMYYCAS-TFGSPRSAIG 92 usage_00582.pdb 39 --ATEPTW---AK------RVSPSFDGHLWAPDIYQH-KGLFYLYYSVS-AFGKNTSAIG 85 waP Y i usage_00243.pdb 90 LASST 94 usage_00414.pdb 84 LASSK 88 usage_00415.pdb 84 LASSK 88 usage_00490.pdb 91 H---- 91 usage_00576.pdb 93 IAVSD 97 usage_00582.pdb 86 VTVNK 90 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################