################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:26 2021 # Report_file: c_0310_5.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00024.pdb # 6: usage_00025.pdb # 7: usage_00029.pdb # 8: usage_00030.pdb # 9: usage_00056.pdb # 10: usage_00063.pdb # # Length: 99 # Identity: 63/ 99 ( 63.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 99 ( 64.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 99 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00020.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00021.pdb 1 ALVQTLLAAGY-PIISSIGITVEGQL-NVNADQAATALAATLGADLILLSDVSGIL---D 55 usage_00022.pdb 1 ALVQTLLAAGY-PIISSIGITVEGQL-NVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00024.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00025.pdb 1 --INSLLENGYLPVVSSIGVTDEGQL-NVNADQAATALAATLGADLILLSDVSGILDGKG 57 usage_00029.pdb 1 KLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 60 usage_00030.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00056.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 usage_00063.pdb 1 --INSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKG 58 LL GY P SSIG T EGQL NVNADQAATALAATLGADLILLSDVSGIL g usage_00019.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLG 97 usage_00020.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLG 97 usage_00021.pdb 56 QRIAE-TAQKAEQLIAQGIITDG-V-------------- 78 usage_00022.pdb 59 QRIAE-TAQKAEQLIAQGIITDG-VVKVNAALDAARSL- 94 usage_00024.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAART-- 95 usage_00025.pdb 58 QRIAE-TAAKAEQLIEQGIITDG-IVKVNAALDAARTLG 94 usage_00029.pdb 61 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTL- 98 usage_00030.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAART-- 95 usage_00056.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLG 97 usage_00063.pdb 59 QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTL- 96 QRIAE TA KAEQLI QGIITDG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################