################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:47 2021 # Report_file: c_1120_144.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00179.pdb # 2: usage_00180.pdb # 3: usage_00210.pdb # 4: usage_00223.pdb # 5: usage_00386.pdb # 6: usage_00387.pdb # 7: usage_00703.pdb # 8: usage_01010.pdb # 9: usage_01011.pdb # # Length: 86 # Identity: 48/ 86 ( 55.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 86 ( 55.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 86 ( 5.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 ----IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 56 usage_00180.pdb 1 ----IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 56 usage_00210.pdb 1 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA-LV 59 usage_00223.pdb 1 -EKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 59 usage_00386.pdb 1 -IRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLV 59 usage_00387.pdb 1 -IRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLV 59 usage_00703.pdb 1 -EKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 59 usage_01010.pdb 1 -EKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 59 usage_01011.pdb 1 -EKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 59 R LNG RVTDEIL LVP FR LRA KLWA R Y N GF GGV WA LV usage_00179.pdb 57 ARTCQLYPNAIASTLVHKFFLVFSKW 82 usage_00180.pdb 57 ARTCQLYPNAIASTLVHKFFLVFSKW 82 usage_00210.pdb 60 ARTCQLYPNAIASTLVHKFFLVFSKW 85 usage_00223.pdb 60 ARICQLYPNACSAVILNRFFIILSEW 85 usage_00386.pdb 60 ARTCQLYPNAAASTLVHKFFLVFSKW 85 usage_00387.pdb 60 ARTCQLYPNAAASTLVHKFFLVFSKW 85 usage_00703.pdb 60 ARICQLYPNACSAVILNRFFIILSEW 85 usage_01010.pdb 60 ARICQLYPNACSAVILNRFFIILSEW 85 usage_01011.pdb 60 ARICQLYPNACSAVILNRFFIILSEW 85 AR CQLYPNA FF S W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################