################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:58 2021 # Report_file: c_0301_8.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00080.pdb # 6: usage_00117.pdb # 7: usage_00118.pdb # 8: usage_00119.pdb # 9: usage_00120.pdb # # Length: 134 # Identity: 75/134 ( 56.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/134 ( 56.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/134 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 -ATVAVVPAAGSGERL-RAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTD 58 usage_00077.pdb 1 --TVAVVPAAGSGERL-RAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTD 57 usage_00078.pdb 1 -ATVAVVPAAGSGERLRA-GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTD 58 usage_00079.pdb 1 -EVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 58 usage_00080.pdb 1 -EVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 58 usage_00117.pdb 1 GEVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 59 usage_00118.pdb 1 GEVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 59 usage_00119.pdb 1 GEVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 59 usage_00120.pdb 1 GEVVAIVPAAGSGERL-AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 59 VA VPAAGSGERL G PKAF L G L E A GL SGV D V AVP TD usage_00076.pdb 59 ESKLVFGGEDSVIVSGGVDRTESVALALEAAG---DAEFVLVHDAARALTPPALIARVVA 115 usage_00077.pdb 58 ESKLVFGGEDSVIVSGGVDRTESVALALEAAG---DAEFVLVHDAARALTPPALIARVVA 114 usage_00078.pdb 59 ESKLVFGGEDSVIVSGGVDRTESVALALEAAG---DAEFVLVHDAARALTPPALIARVVA 115 usage_00079.pdb 59 EARQILGH-RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 117 usage_00080.pdb 59 EARQILGH-RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 117 usage_00117.pdb 60 EARQILGH-RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 118 usage_00118.pdb 60 EARQILGH-RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 118 usage_00119.pdb 60 EARQILGH-RAMIVAGGSNRTDTVNLALTVLS---EPEFVLVHDAARALTPPALVARVVE 115 usage_00120.pdb 60 EARQILGH-RAMIVAGGSNRTDTVNLALTVL----EPEFVLVHDAARALTPPALVARVVE 114 E G IV GG RT V LAL EFVLVHDAARALTPPAL ARVV usage_00076.pdb 116 ALKEGHSAVVPGLA 129 usage_00077.pdb 115 ALKEGHSAVVPGLA 128 usage_00078.pdb 116 ALKEGHSAVVPGLA 129 usage_00079.pdb 118 ALRDGYAAVVPVLP 131 usage_00080.pdb 118 ALRDGYAAVVPVLP 131 usage_00117.pdb 119 ALRDGYAAVVPVLP 132 usage_00118.pdb 119 ALRDGYAAVVPVLP 132 usage_00119.pdb 116 ALRDGYAAVVPVLP 129 usage_00120.pdb 115 ALRDGYAAVVPVLP 128 AL G AVVP L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################