################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:25 2021 # Report_file: c_1164_136.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00028.pdb # 2: usage_00483.pdb # 3: usage_01376.pdb # 4: usage_01795.pdb # 5: usage_01796.pdb # # Length: 52 # Identity: 2/ 52 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 52 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 52 ( 34.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ----IAIPHGKLEEDT--LRAVGVFVQLET-PIAFDAIDNQPVDLLFALLVP 45 usage_00483.pdb 1 FAIVFKTPKYKD-VNITKPASVFVQL-RRKSD------LE-TSEPKPFLYYP 43 usage_01376.pdb 1 --G-VAIPHGRH-AGV--KQATGAFIRTRE-PVGFDAPDGKPVSLIFILL-- 43 usage_01795.pdb 1 ----VAIPHGRI-KGL--KHPLAAFVRLAE-PIPFEAPDGQPVSLLIFLLVP 44 usage_01796.pdb 1 ----VAIPHGRI-KGL--KHPLAAFVRLAE-PIPFEAPDGQPVSLLIFLLVP 44 aiPhg f p d pv l Ll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################