################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:34 2021 # Report_file: c_0466_12.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00091.pdb # 2: usage_00102.pdb # 3: usage_00103.pdb # 4: usage_00146.pdb # # Length: 104 # Identity: 12/104 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/104 ( 36.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/104 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00091.pdb 1 DWVPLILGGDNSISYSTIKAIAQTKG--TTAVIQFDAHHDVRNTE---DGGPTNG--TPF 53 usage_00102.pdb 1 --LPLSVGGDHLVTLPIFRALGRE-R--PLGMVHFDAHSDTNDR-YFGDNPYTHG--TPF 52 usage_00103.pdb 1 --VPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHFSARPSVSD------------PRSPL 46 usage_00146.pdb 1 GTLPLSVGGDHLVTLPIFRALGRE-R--PLGMVHFDAHSDTNDR-YFGDNPYTHG--TPF 54 PlsvGGD tl A r vhFdAh d d tPf usage_00091.pdb 54 RRLLDEEIIEGQHLIQLGIREFSN-SQAYEAYAKKHNVNIHT-- 94 usage_00102.pdb 53 RRAIEEGLLDPLRTVQIGIRGSV-YSPDDDAFARECGIRVIH-- 93 usage_00103.pdb 47 RVLLDKGLLK--GVVSVGNRQ-V--SSEDRKVRKLHKMFYMDMH 85 usage_00146.pdb 55 RRAIEEGLLDPLRTVQIGIRGSV-YSPDDDAFARECGIRVIH-- 95 Rr egll vq GiR v S d a a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################