################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:04 2021 # Report_file: c_1399_230.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00062.pdb # 2: usage_00355.pdb # 3: usage_00965.pdb # 4: usage_00966.pdb # 5: usage_01034.pdb # 6: usage_01070.pdb # 7: usage_01240.pdb # 8: usage_01241.pdb # 9: usage_01242.pdb # 10: usage_01250.pdb # 11: usage_01261.pdb # 12: usage_01570.pdb # 13: usage_01591.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 49 ( 4.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 49 ( 55.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 ---IRYR-------QRYLDLLINESSRHTFVTRTKIIN-FLRNFLNERG 38 usage_00355.pdb 1 -TEIRYR-------QRYLDLLINESSRHTFVTRTKIIN-FLRNFLNERG 40 usage_00965.pdb 1 ---IRYR-------QRYLDLLINESSRHTFVTRTKIIN-FLRNFLNERG 38 usage_00966.pdb 1 ---IRYR-------QRYLDLLINESSRHTFVTRTKIIN-FLRNFLNERG 38 usage_01034.pdb 1 LDDIIR--------ERRVEFGMEY-SNWYDMVTWFRYLPDKMLNYFNNQ 40 usage_01070.pdb 1 -QEVRYR-------QRYLDLMLNEESRKVFKLRSRAIK-YIRNYFDRLG 40 usage_01240.pdb 1 DKETRYR-------QRYLDLILNDFVRQKFIIRSKIIT-YIRSFLDELG 41 usage_01241.pdb 1 DKETRYR-------QRYLDLILNDFVRQKFIIRSKIIT-YIRSFLDELG 41 usage_01242.pdb 1 DKETRYR-------QRYLDLILNDFVRQKFIIRSKIIT-YIRSFLDELG 41 usage_01250.pdb 1 -TEEQTESIYLDEVAERNSLAK-TV---YAIFVPLREG----------- 33 usage_01261.pdb 1 -QETRFR-------KRYLDLIVNPESVKNFVLRTKVVK-AVRKYLDDKG 40 usage_01570.pdb 1 DQEVRYR-------QRYLDLIANDKSRQTFVVRSKILA-AIRQFMVARG 41 usage_01591.pdb 1 DQEVRYR-------QRYLDLMLNEESRKVFKLRSRAIK-YIRNYFDRLG 41 r l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################