################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:14:15 2021 # Report_file: c_0392_14.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00026.pdb # 7: usage_00027.pdb # 8: usage_00040.pdb # 9: usage_00086.pdb # 10: usage_00110.pdb # 11: usage_00116.pdb # 12: usage_00168.pdb # 13: usage_00170.pdb # 14: usage_00204.pdb # 15: usage_00208.pdb # 16: usage_00228.pdb # 17: usage_00232.pdb # 18: usage_00233.pdb # 19: usage_00234.pdb # # Length: 90 # Identity: 2/ 90 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 90 ( 12.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 90 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -SAL--TQPPSVS-VAPGQTATITCGGNN---I-GRKRVDWFQQKP--GQAPVLV----- 45 usage_00015.pdb 1 -SAL--TQPPSVS-VAPGQTATITCGGNN---I-GRKRVDWFQQKP--GQAPVLV----- 45 usage_00016.pdb 1 -SAL--TQPPSVS-VAPGQTATITCGGNN---I-GRKRVDWFQQKP--GQAPVLV----- 45 usage_00017.pdb 1 --AL--TQPPSVS-VAPGQTATITCGGNN---I-GRKRVDWFQQKP--GQAPVLV----- 44 usage_00018.pdb 1 -SAL--TQPPSVS-VAPGQTATITCGGNN---I-GRKRVDWFQQKP--GQAPVLV----- 45 usage_00026.pdb 1 --GL--TQPPSVS-VAPGQTARITCGGNN---I-GSKSVHWYQQKP--GQAPVLVVYD-D 48 usage_00027.pdb 1 --GL--TQPPSVS-VAPGQTARITCGGNN---I-GSKSVHWYQQKP--GQAPVLVVYD-D 48 usage_00040.pdb 1 -SVL--TQPPSVS-VAPGQTARISCSGDN---I-GSYYVHWYQQKP--GQAPVLVIYE-D 49 usage_00086.pdb 1 --KT--TQPNSME-SNEEEPVHLPCNHST---ISGTDYIHWYRQLP--SQGPEYVIHGLT 50 usage_00110.pdb 1 PSAL--TQPPSAS-GSLGQSVTISCTGTSSDVG-GYNYVSWYQQHA--GKAPKVIIYE-V 53 usage_00116.pdb 1 --EL--TQPPSVS-VAPGQTARISCSGDS---I-GKKYAYWYQQKP--GQAPVLV----- 44 usage_00168.pdb 1 ---L--TQSASVS-GSLGQSVTISCTGPNSVCC-SHKSISWYQWPP--GRAPTLIIYE-D 50 usage_00170.pdb 1 --EL--TQETGVS-VALGRTVTITCRGDS---L-RSHYASWYQKKP--GQAPILLFYG-K 48 usage_00204.pdb 1 ---L--TQPPSVS-GAPGQRVTISCTGSSSNIG-AGHNVKWYQQLP--GTAPKLLI-FH- 49 usage_00208.pdb 1 ----TATVTP-SSGLSDGTVVKVAGAG----LQ-AGTAYWVAQWARVDTGVWAYNP---- 46 usage_00228.pdb 1 -IEL--TQPPSVS-VAPGQTARISCSGDS---I-GKKYAYWYQQKP--GQAPVLVIYK-- 48 usage_00232.pdb 1 ---L--TQSASVS-GSLGQSVTISCTGPNSVCC-SHKSISWYQWPP--GRAPTLIIYE-D 50 usage_00233.pdb 1 --EL--TQDPAVS-VALKQTVTITCRGDS---L-RSHYASWYQKKP--GQAPVLLFYG-K 48 usage_00234.pdb 1 --EL--TQDPAVS-VALKQTVTITCRGDS---L-RSHYASWYQKKP--GQAPVLLFYG-K 48 Tq s c g w q p usage_00014.pdb 46 --------ERFSDSNS---GTTATLTISR- 63 usage_00015.pdb 46 --------ERFSDSNS---GTTATLTISR- 63 usage_00016.pdb 46 --------ERFSDSNS---GTTATLTISR- 63 usage_00017.pdb 45 --------ERFSDSNS---GTTATLTISR- 62 usage_00018.pdb 46 --------ERFSDSNS---GTTATLTISR- 63 usage_00026.pdb 49 SDRPSGIPERFSGSNS---GNTATLTISR- 74 usage_00027.pdb 49 SDRPSGIPERFSGSNS---GNTATLTISR- 74 usage_00040.pdb 50 SERPSGIPERFSGSNS---GNTATLTISG- 75 usage_00086.pdb 51 SNV---NNRMASLAIAED-RKSSTLILHR- 75 usage_00110.pdb 54 NKRPSGVPDRFSGSKS---GNTASLTV--- 77 usage_00116.pdb 45 --------ERFSGSNS---GNTATLTISG- 62 usage_00168.pdb 51 NERAPGISPRFSGYKS---YWSAYLTISD- 76 usage_00170.pdb 49 NNRPSGVPDRFSGSAS---GNRASLTISG- 74 usage_00204.pdb 50 ------NNARFSVSKS---GTSATLAITG- 69 usage_00208.pdb 47 --------ADNSSVTA-DANGSASTSL--T 65 usage_00228.pdb 49 -KRPSGIPERFSGSNS---GNTATLTISG- 73 usage_00232.pdb 51 NERAPGISPRFSGYKS---YWSAYLTISD- 76 usage_00233.pdb 49 NNRPSGIPDRFSGSAS---GNRASLTITG- 74 usage_00234.pdb 49 NNRPSGIPDRFSGSAS---GNRASLTITG- 74 S a l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################