################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:03 2021 # Report_file: c_0997_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00010.pdb # 8: usage_00011.pdb # 9: usage_00021.pdb # 10: usage_00022.pdb # 11: usage_00158.pdb # 12: usage_00159.pdb # 13: usage_00229.pdb # 14: usage_00230.pdb # 15: usage_00231.pdb # # Length: 37 # Identity: 21/ 37 ( 56.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 37 ( 56.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 37 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- 36 usage_00002.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- 36 usage_00003.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- 36 usage_00004.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV-- 35 usage_00005.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFL----- 32 usage_00006.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- 36 usage_00010.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLS---- 33 usage_00011.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFL----- 32 usage_00021.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV-- 35 usage_00022.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLS---- 33 usage_00158.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV-- 35 usage_00159.pdb 1 RVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV-- 35 usage_00229.pdb 1 RVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH 37 usage_00230.pdb 1 RVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH 37 usage_00231.pdb 1 RVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV-- 35 RV FMDGG I EEG PE F RP ERT FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################