################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:52 2021 # Report_file: c_0138_10.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # # Length: 198 # Identity: 141/198 ( 71.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 141/198 ( 71.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/198 ( 3.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 TREEIERIIRKAFELALTRKKKVTSVDKANVLESSRLWREVAEEVAKEYPDVELEHMLVD 60 usage_00018.pdb 1 --EEIERIIRKAFELALTRKKKVTSVDKANVLESSRLWREVAEEVAKEYPDVELEHMLVD 58 usage_00036.pdb 1 -REEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVD 59 usage_00037.pdb 1 TREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVD 60 usage_00038.pdb 1 TREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVD 60 usage_00039.pdb 1 TREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVD 60 EEIERII KAF LA R KK SVDKANVLESSR WRE AEE AK YPDVEL HMLVD usage_00017.pdb 61 NAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDGLGLYEPVHGSA 120 usage_00018.pdb 59 NAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDGLGLYEPVHGSA 118 usage_00036.pdb 60 STAMQLIANPGQFDVIVTENMFGDILSDLASVITGSLGMLPSASLRSDRFGMYEPVHGSA 119 usage_00037.pdb 61 STAMQLIANPGQFDVIVTENMFGDILSDLASVITGSLGMLPSASLRSDRFGMYEPVHGSA 120 usage_00038.pdb 61 STAMQLIANPGQFDVIVTENMFGDILSDLASVITGSLGMLPSASLRSDRFGMYEPVHGSA 120 usage_00039.pdb 61 STAMQLIANPGQFDVIVTENMFGDILSDLASVITGSLGMLPSASLRSDRFGMYEPVHGSA 120 AMQLI NP QFDVIVTENMFGDILSD AS ITGSLGMLPSASL D G YEPVHGSA usage_00017.pdb 121 PDIAGKGIANPLATILSAAMMLRYSFGLEEEAKAIEKAVEKVLAEGYRTADIAKPGGKYV 180 usage_00018.pdb 119 PDIAGKGIANPLATILSAAMMLRYSFGLEEEAKAIEKAVEKVLAEGYRTADIAKPGGKYV 178 usage_00036.pdb 120 PDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVV 179 usage_00037.pdb 121 PDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVV 180 usage_00038.pdb 121 PDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVV 180 usage_00039.pdb 121 PDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVV 180 PDIAG G ANPL T LSAA MLRYSFGLE EA AIEKAV VL GY T D GK V usage_00017.pdb 181 STTEMTDEVKAAVVDELA 198 usage_00018.pdb 179 STTEMTDEVKAAVVDELA 196 usage_00036.pdb 180 STIELTDRLIEKLN---- 193 usage_00037.pdb 181 STIELTDRLIEKLN---- 194 usage_00038.pdb 181 STIELTDRLIEKLN---- 194 usage_00039.pdb 181 STIELTDRLIEKLN---- 194 ST E TD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################