################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:33 2021 # Report_file: c_0512_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00169.pdb # 2: usage_00364.pdb # 3: usage_00413.pdb # 4: usage_00414.pdb # 5: usage_00430.pdb # 6: usage_00431.pdb # 7: usage_00432.pdb # 8: usage_00817.pdb # 9: usage_00818.pdb # 10: usage_00819.pdb # 11: usage_00820.pdb # # Length: 123 # Identity: 44/123 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/123 ( 49.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/123 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00169.pdb 1 SNAEALAVIAEAVKAAG-YELGKDITLAMDCAASEFYKD--GKYVLA-GE--GNKAFTSE 54 usage_00364.pdb 1 SNEEGFEVIIEAIEKAG-YVPGKDVVLAMDAASSEFYDKEKGVYVLA-DS--GEGEKTTD 56 usage_00413.pdb 1 GTEDAVETIIQAIEAAG-YKPGEEVFLGFDCASSEFYEN--GVYDYSKFEGEHGAKRTAA 57 usage_00414.pdb 1 GTEDAVETIIQAIEAAG-YKPGEEVFLGFDCASSEFYEN--GVYDYSKFEGEHGAKRTAA 57 usage_00430.pdb 1 -TEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 59 usage_00431.pdb 1 -TEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 59 usage_00432.pdb 1 GTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 60 usage_00817.pdb 1 GTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 60 usage_00818.pdb 1 GTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 60 usage_00819.pdb 1 GTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 60 usage_00820.pdb 1 GTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSA 60 e e I AieaAG DcAsSEFY vY e T usage_00169.pdb 55 EFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGI 114 usage_00364.pdb 57 EMIKFYEELVSKYPIISIEDGLDENDWDGFKKLTDVLGDKVQLVGDDLFVTNTQKLSEGI 116 usage_00413.pdb 58 EQVDYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGI 117 usage_00414.pdb 58 EQVDYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGI 117 usage_00430.pdb 60 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGKRVQLVGDDFFVTNTEYLARGI 119 usage_00431.pdb 60 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGKRVQLVGDDFFVTNTEYLARGI 119 usage_00432.pdb 61 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGKRVQLVGDDFFVTNTEYLARGI 120 usage_00817.pdb 61 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGARVQLVGDDFFVTNTEYLARGI 120 usage_00818.pdb 61 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGARVQLVGDDFFVTNTEYLARGI 120 usage_00819.pdb 61 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGARVQLVGDDFFVTNTEYLARGI 120 usage_00820.pdb 61 EQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTERLGARVQLVGDDFFVTNTEYLARGI 120 E lE Lv kYPIi IEDG DEnDWDG k lT G vQLVGDD FVTNT L GI usage_00169.pdb 115 EKG 117 usage_00364.pdb 117 EKG 119 usage_00413.pdb 118 EN- 119 usage_00414.pdb 118 EN- 119 usage_00430.pdb 120 KEN 122 usage_00431.pdb 120 KE- 121 usage_00432.pdb 121 KEN 123 usage_00817.pdb 121 KE- 122 usage_00818.pdb 121 KEN 123 usage_00819.pdb 121 KEN 123 usage_00820.pdb 121 KE- 122 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################