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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:09:58 2021
# Report_file: c_0875_55.html
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#====================================
# Aligned_structures: 9
#   1: usage_00012.pdb
#   2: usage_00013.pdb
#   3: usage_00016.pdb
#   4: usage_00017.pdb
#   5: usage_00018.pdb
#   6: usage_00241.pdb
#   7: usage_00242.pdb
#   8: usage_00244.pdb
#   9: usage_00245.pdb
#
# Length:        117
# Identity:       93/117 ( 79.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     93/117 ( 79.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/117 ( 12.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00012.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00013.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00016.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00017.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00018.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00241.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00242.pdb         1  LTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW   60
usage_00244.pdb         1  LTVRV-ELALNY-LTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLF-VTGAIVYDW   57
usage_00245.pdb         1  -TVRV-ELALNY-LTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLF-VTGAIVYDW   56
                            TVRV   ALNY  TKDPKVGREAITSIIDTLETATFKPAGDISRGIGLF VTGAIVYDW

usage_00012.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGAASEWMI-MRDLLSVGIAI  116
usage_00013.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGAASEWMI-MRDLLSVGIAI  116
usage_00016.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASEWMI-MRDLLSVGIAI  116
usage_00017.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASE-----WMIMRD----  108
usage_00018.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASEWMI-MRDLLSVGIAI  116
usage_00241.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASEWMI-MRDLLSVGIAI  116
usage_00242.pdb        61  CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASE-----WMIMRD----  108
usage_00244.pdb        58  CYDQLKPEEKTRFVKAFVRLAK-LECGYPPVKDKSIVGHASE---WIRDLLSVGIAI  110
usage_00245.pdb        57  CYDQLKPEEKTRFVKAFVRLAK-LECGYPPVKDKSIVGHASE---WIRDLLSVGIAI  109
                           CYDQLKPEEKTRFVKAFVRLAK LECGYPPVKDKSIVG ASE               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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