################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:22 2021 # Report_file: c_1023_77.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00401.pdb # 2: usage_00442.pdb # 3: usage_00443.pdb # 4: usage_00508.pdb # 5: usage_00676.pdb # 6: usage_00722.pdb # 7: usage_00723.pdb # 8: usage_00859.pdb # 9: usage_01139.pdb # 10: usage_01142.pdb # 11: usage_01177.pdb # 12: usage_01178.pdb # # Length: 59 # Identity: 4/ 59 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 59 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 59 ( 40.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00401.pdb 1 STRIIYGGS--------VTGGNCKELASQHDVDGFLVGGASLKPEFVDIINA------- 44 usage_00442.pdb 1 -VIIQYGGS--------VNASNAAELFAQHDVDGFLVGGASLKPEFVDIINAAEAAKQA 50 usage_00443.pdb 1 -VIIQYGGS--------VNASNAAELFAQHDVDGFLVGGASLKPEFVDIINAAEAAKQA 50 usage_00508.pdb 1 --RILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 42 usage_00676.pdb 1 -LRILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 43 usage_00722.pdb 1 --RIIYGGS--------VTGATCKELASQPDVDGFLVGGASLKPEFVDIINA------- 42 usage_00723.pdb 1 -TRIIYGGS--------VTGATCKELASQPDVDGFLVGGASLKPEFVDIINA------- 43 usage_00859.pdb 1 -LRILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 43 usage_01139.pdb 1 -LRILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 43 usage_01142.pdb 1 --FFEVAALTDGETNES-VAAVCKIAAKDPAIVGVSVRPAF----VRFIR--------- 43 usage_01177.pdb 1 -LRILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 43 usage_01178.pdb 1 -LRILYGGS--------ANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS------- 43 i yggs dvdGflVggAs fvdIi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################