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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:50:20 2021
# Report_file: c_1383_9.html
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#====================================
# Aligned_structures: 8
#   1: usage_00100.pdb
#   2: usage_00101.pdb
#   3: usage_00104.pdb
#   4: usage_00304.pdb
#   5: usage_00445.pdb
#   6: usage_00446.pdb
#   7: usage_00628.pdb
#   8: usage_00729.pdb
#
# Length:         53
# Identity:       25/ 53 ( 47.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/ 53 ( 64.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 53 ( 26.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00100.pdb         1  GPFRETPLRDLATMTPDQAC--------RKISVDSATMMNKGLEYIEARWLFN   45
usage_00101.pdb         1  GPFRETPLRDLATMTPDQAC--------RKISVDSATMMNKGLEYIEARWLF-   44
usage_00104.pdb         1  GPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN   53
usage_00304.pdb         1  GPFRTTSLAEMATVTPERAVQ------GAKISIDSATMMNKGLELIEAFHL--   45
usage_00445.pdb         1  GPFRETPLSQFSDVTPDQA---------RKISVDSATMMNKGLEYIEARWLF-   43
usage_00446.pdb         1  GPFRETPLSQFSDVTPDQACA------GRKISVDSATMMNKGLEYIEARWLF-   46
usage_00628.pdb         1  GPFRETPLRDLAT-TPDQACRHP-NWSGRKISVDSAT--NKGLEYIEARWLFN   49
usage_00729.pdb         1  GPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN   53
                           GPFReTpL      TPdqA         rKISvDSAT  NKGLEyIEArwL  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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