################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:26:26 2021 # Report_file: c_0174_13.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00236.pdb # 2: usage_00237.pdb # 3: usage_00238.pdb # 4: usage_00240.pdb # 5: usage_00241.pdb # 6: usage_00242.pdb # 7: usage_00243.pdb # 8: usage_00244.pdb # 9: usage_00245.pdb # 10: usage_00246.pdb # 11: usage_00247.pdb # 12: usage_00248.pdb # 13: usage_00249.pdb # 14: usage_00250.pdb # 15: usage_00253.pdb # 16: usage_00452.pdb # 17: usage_00453.pdb # 18: usage_00454.pdb # 19: usage_00455.pdb # 20: usage_00462.pdb # # Length: 190 # Identity: 23/190 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/190 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/190 ( 12.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 AMKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 59 usage_00237.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00238.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00240.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00241.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00242.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00243.pdb 1 AMKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 59 usage_00244.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00245.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00246.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00247.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00248.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00249.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00250.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00253.pdb 1 --KHGIYYSYWEHEWSAKFGPYIEKVAKLGFDIIEVAAHHIN-EYSDAELATIRKSAKDN 57 usage_00452.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00453.pdb 1 AMKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 59 usage_00454.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00455.pdb 1 -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-FYSDIQINELKACAHGN 58 usage_00462.pdb 1 -MKFGVSSL-V-----ESLTSSMEKIAEHNFDAWEIVCEG-THYLSPKNIKYLMELRDRY 52 KhGiyy w a yiEKvAklgFDi Eiaa ySd i l a n usage_00236.pdb 60 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 117 usage_00237.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00238.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00240.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00241.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00242.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00243.pdb 60 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 117 usage_00244.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00245.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00246.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00247.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00248.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00249.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00250.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00253.pdb 58 GIILTAGI-GPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSY-WPIDY 115 usage_00452.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00453.pdb 60 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 117 usage_00454.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00455.pdb 59 GITLTVGH-GPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSY-WPIDY 116 usage_00462.pdb 53 EVEIVVHAPFS--DLNPASMNERVRKLTVECIRDAIEGAFELDSEVVVVH----PGYIPE 106 gi ltvg gp NlsS d Rk kaf d l kLD h igga wpIdy usage_00236.pdb 118 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 175 usage_00237.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00238.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00240.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00241.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00242.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00243.pdb 118 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 175 usage_00244.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00245.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00246.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00247.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00248.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00249.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00250.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00253.pdb 116 SQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFEN--HVLNTAAEGVAFVKDVG 173 usage_00452.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00453.pdb 118 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 175 usage_00454.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00455.pdb 117 TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN--YLINTAQEGVDFVKQVD 174 usage_00462.pdb 107 LWSNYVSEILDNNFSTLSEIVEIAEDYGIKIGLENMPNF--RGVLGITPESLLEIVKDID 164 dk gd r ve e a Ae G clEvlnrF l nTa egv fVK vd usage_00236.pdb 176 HNNVKVMLD- 184 usage_00237.pdb 175 HNNVKVMLD- 183 usage_00238.pdb 175 HNNVKVMLDT 184 usage_00240.pdb 175 HNNVKVMLD- 183 usage_00241.pdb 175 HNNVKVMLD- 183 usage_00242.pdb 175 HNNVKVMLDT 184 usage_00243.pdb 176 HNNVKVMLD- 184 usage_00244.pdb 175 HNNVKVMLDT 184 usage_00245.pdb 175 HNNVKVMLDT 184 usage_00246.pdb 175 HNNVKVMLDT 184 usage_00247.pdb 175 HNNVKVMLDT 184 usage_00248.pdb 175 HNNVKVMLDT 184 usage_00249.pdb 175 HNNVKVMLD- 183 usage_00250.pdb 175 HNNVKVMLD- 183 usage_00253.pdb 174 KNNVKVLD-- 181 usage_00452.pdb 175 HNNVKVMLD- 183 usage_00453.pdb 176 HNNVKVMLD- 184 usage_00454.pdb 175 HNNVKVMLD- 183 usage_00455.pdb 175 HNNVKVMLD- 183 usage_00462.pdb 165 SKNLGITFD- 173 nNvkv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################