################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:13 2021 # Report_file: c_1408_45.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00095.pdb # 2: usage_00096.pdb # 3: usage_00153.pdb # 4: usage_00154.pdb # 5: usage_00364.pdb # 6: usage_00434.pdb # 7: usage_01412.pdb # 8: usage_01413.pdb # # Length: 109 # Identity: 70/109 ( 64.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/109 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/109 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 -LMGCLRQLHSGLFLYQGLLQALAGISP----ELAPTLDTLQLDTTDFAINIWQQMEDLG 55 usage_00096.pdb 1 QLMGCLRQLHSGLFLYQGLLQALAGISP----ELAPTLDTLQLDTTDFAINIWQQMEDLG 56 usage_00153.pdb 1 -LAGCLSQLHSGLFLYQGLLQALEGISP----ELGPTLDTLQLDVADFATTIWQQMEELG 55 usage_00154.pdb 1 -LAGCLSQLHSGLFLYQGLLQALEGISP----ELGPTLDTLQLDVADFATTIWQQMEELG 55 usage_00364.pdb 1 ----CLSQLHSGLFLYQGLLQALEGISP----ELGPTLDTLQLDVADFATTIWQQMEELG 52 usage_00434.pdb 1 QLAGCLSQLHSGLFLYQGLLQALE----GISPELGPTLDTLQLDVADFATTIWQQMEELG 56 usage_01412.pdb 1 -LAGCLSQLHSGLFLYQGLLQALEGISP----ELGPTLDTLQLDVADFATTIWQQMEELG 55 usage_01413.pdb 1 -LAGCLSQLHSGLFLYQGLLQALEGISP----ELGPTLDTLQLDVADFATTIWQQMEELG 55 CL QLHSGLFLYQGLLQAL EL PTLDTLQLD DFA IWQQME LG usage_00095.pdb 56 MAP-------TMPAFTSAFQRRAGGVLVASNLQSFLELAYRALRHF--- 94 usage_00096.pdb 57 MAPA------TMPAFTSAFQRRAGGVLVASNLQSFLELAYRALRHFA-- 97 usage_00153.pdb 56 MAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQP 104 usage_00154.pdb 56 MAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA-- 102 usage_00364.pdb 53 M----------MPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHL--- 88 usage_00434.pdb 57 MAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHL--- 102 usage_01412.pdb 56 MA--------AMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQ- 95 usage_01413.pdb 56 MA--------AMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQ- 95 M MPAF SAFQRRAGGVLVAS LQSFLE YR LRH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################