################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:55 2021 # Report_file: c_1243_182.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00622.pdb # 2: usage_00759.pdb # 3: usage_00797.pdb # 4: usage_00798.pdb # 5: usage_00799.pdb # 6: usage_00800.pdb # 7: usage_00830.pdb # 8: usage_00831.pdb # 9: usage_00908.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 55 ( 7.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 55 ( 72.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00622.pdb 1 AIAVACPPPS--R-YLKSTA---LFLWLLGFE-------FPETIMVFTK------ 36 usage_00759.pdb 1 -IVVSVGVDEE-IVYAKSTA---LQTWLFGYE-------LTDTIMVFCD------ 37 usage_00797.pdb 1 SLLFVLGSSNAENPYQKTTI---LHNWLLSYE-------FPATLIAL-------- 37 usage_00798.pdb 1 SLLFVLGSSNAENPYQKTTI---LHNWLLSYE-------FPATLIAL-------- 37 usage_00799.pdb 1 -LLFVLGSSNAENPYQKTTI---LHNWLLSYE-------FPATLIAL-------- 36 usage_00800.pdb 1 -LLFVLGSSNAENPYQKTTI---LHNWLLSYE-------FPATLIAL-------- 36 usage_00830.pdb 1 -ILVTVGAHDDTNPYQKSTA---LHTWLLGYE-------FPSTLILLEK------ 38 usage_00831.pdb 1 -ILVTVGAHDDTNPYQKSTA---LHTWLLGYE-------FPSTLILLEK------ 38 usage_00908.pdb 1 --------------------NIFNSRLWMT--SGHWQHYSENMFSFEVEKELFAL 33 l wl t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################