################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:32 2021 # Report_file: c_1004_22.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00107.pdb # 2: usage_00199.pdb # 3: usage_00287.pdb # 4: usage_00288.pdb # 5: usage_00410.pdb # # Length: 61 # Identity: 6/ 61 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 61 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 61 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 NVVIEVEDD-------------------DVVKNVVESLNGSISIESEKDKGTKVTIRLPL 41 usage_00199.pdb 1 -VRVEVVDDGV----GISG--DITESGLRNLRQRADDAGGEFTVENMPTGGTLLRWSAP- 52 usage_00287.pdb 1 QLRVTVEDDGRGIPEDCDWPNEG-NLGSRIVRQLVQGLGAELNVTRGG-TGTIVNIDIPL 58 usage_00288.pdb 1 QLRVTVEDDGRGIPEDCDWPNEG-NLGSRIVRQLVQGLGAELNVT----TGTIVNIDIP- 54 usage_00410.pdb 1 QLRVTVEDDGRGIPEDCDWPNEG-NLGSRIVRQLVQGLGAELNVTRGG-TGTIVNIDIPL 58 rv VeDD r vrq v lg e v GT v i P usage_00107.pdb 42 T 42 usage_00199.pdb - usage_00287.pdb 59 S 59 usage_00288.pdb - usage_00410.pdb 59 S 59 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################