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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:13:28 2021
# Report_file: c_1420_4.html
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#====================================
# Aligned_structures: 5
#   1: usage_00305.pdb
#   2: usage_00643.pdb
#   3: usage_01260.pdb
#   4: usage_01263.pdb
#   5: usage_01413.pdb
#
# Length:         84
# Identity:        9/ 84 ( 10.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     56/ 84 ( 66.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           28/ 84 ( 33.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00305.pdb         1  -----P-----ARIIAIVSVMVILISIVSFCLETLPIFRDEFHTYSQSTIGYQQSTSFTD   50
usage_00643.pdb         1  -YLRI-TNIVESSFFTKFIIYLIVLNGITMGLETSKTFM--QSFG--------------V   42
usage_01260.pdb         1  ------TNIVESSFFTKFIIYLIVLNGITMGLETSKTFM--QSFG--------------V   38
usage_01263.pdb         1  -YLRI-TNIVESSFFTKFIIYLIVLNGITMGLETSKTFM--QSFG--------------V   42
usage_01413.pdb         1  MYLRI-TNIVESSFFTKFIIYLIVLNGITMGLETSKTFM--QSFG--------------V   43
                                      ssfftkfiiylIvlngitmgLETsktFm  qsfg              v

usage_00305.pdb        51  PFFIVETLCIIWFSFEFLVRFFA-   73
usage_00643.pdb        43  YTTLFNQIVITIFTIEIILRIYVH   66
usage_01260.pdb        39  YTTLFNQIVITIFTIEIILRIYV-   61
usage_01263.pdb        43  YTTLFNQIVITIFTIEIILRIYV-   65
usage_01413.pdb        44  YTTLFNQIVITIFTIEIILRIYV-   66
                           yttlfnqivItiFtiEiilRiyv 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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