################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:37 2021 # Report_file: c_1221_190.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00087.pdb # 2: usage_00090.pdb # 3: usage_00119.pdb # 4: usage_00139.pdb # 5: usage_00412.pdb # 6: usage_00414.pdb # 7: usage_00563.pdb # 8: usage_00789.pdb # 9: usage_00816.pdb # 10: usage_00820.pdb # 11: usage_00821.pdb # 12: usage_00823.pdb # 13: usage_00825.pdb # 14: usage_01311.pdb # 15: usage_01313.pdb # 16: usage_01356.pdb # 17: usage_01647.pdb # 18: usage_01649.pdb # 19: usage_01718.pdb # 20: usage_01967.pdb # 21: usage_01968.pdb # 22: usage_01969.pdb # 23: usage_01995.pdb # 24: usage_02169.pdb # 25: usage_02278.pdb # 26: usage_02280.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 56 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 56 ( 69.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00090.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00119.pdb 1 G-------------GKLSVESTRENMAYTVEC---LRDDVEILMEFLLNVT----- 35 usage_00139.pdb 1 G-------------GKLSVESTRENMAYTVEC---LRDDVEILMEFLLNVT----- 35 usage_00412.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00414.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_00563.pdb 1 --------------EQTLVVRTKEGLVVITGCSHR---GIDNILLDIAET------ 33 usage_00789.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00816.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_00820.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00821.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_00823.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_00825.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_01311.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_01313.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_01356.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_01647.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_01649.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_01718.pdb 1 G-------------GKLSVESTRENMAYTVEC---LRDDVEILMEFLLNVT----- 35 usage_01967.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_01968.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_01969.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_01995.pdb 1 -GRIAKFSKVRTIQHFPVFMN----EKEDIL---------------WCTEMERVFG 36 usage_02169.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVTTA--- 37 usage_02278.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 usage_02280.pdb 1 G-------------GKLSVTSTRENMAYTVEC---LRDDVDILMEFLLNVT----- 35 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################