################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:45 2021 # Report_file: c_0054_27.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00048.pdb # 3: usage_00055.pdb # 4: usage_00145.pdb # 5: usage_00194.pdb # 6: usage_00219.pdb # 7: usage_00245.pdb # # Length: 293 # Identity: 27/293 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/293 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 87/293 ( 29.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 EPALRLGRKLIDATFA--ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAF 58 usage_00048.pdb 1 EPALRLGRKLIDATFA--ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAF 58 usage_00055.pdb 1 PWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIKLARKYWRDKG-KNKWKFISFENSF 58 usage_00145.pdb 1 EIENKLAKLVIERVPS-IEI-VRVNSGTEAT-SALRLARGYTG------RNKILKFIGCY 51 usage_00194.pdb 1 EPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKF-SRYRGY 58 usage_00219.pdb 1 EPALRLGRKLIDATFA--ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAF 58 usage_00245.pdb 1 PLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSP-RG--KFTFIATSGAF 57 L l f NSGtE A klAr Y k usage_00013.pdb 59 HGRSLFTV--SVGGQP-KYSDGFGP--KPADIIHVPFN----------------DLHAVK 97 usage_00048.pdb 59 HGQSLFTV--SVGGQP-KYSDGFGP--KPADIIHVPFN----------------DLHAVK 97 usage_00055.pdb 59 HGRTYGSL--SATGQP-KFHKGFEP--LVPGFSYAKLN----------------DIDSVY 97 usage_00145.pdb 52 HGHGDSLL--IKAGSGV-DSPGVPEGV-AKNTITVAYN----------------DLESVK 91 usage_00194.pdb 59 HGNT----ATAATGQA-QRRYQYEP--FASGFLHVTPPDCYRPGIERENIYDVECVKEVD 111 usage_00219.pdb 59 HGRSLFTV--SVGGQP-KYSDGFGP--KPADIIHVPFN----------------DLHAVK 97 usage_00245.pdb 58 HGKSLGAL--SATAKS-TFRKPFMP--LLPGFRHVPFG----------------NIEAMR 96 HG g p v v usage_00013.pdb 98 AVM-----D---DHTCAVVVEPIQGEGGVQAATPE----FLKGLRDLCDEHQALLVFDEV 145 usage_00048.pdb 98 AVM-----D---DHTCAVVVEPIQGEGGVQAATPE----FLKGLRDLCDEHQALLVFDEV 145 usage_00055.pdb 98 KLL-----D---EETAGIIIEVIQGEGGVNEASED----FLSKLQEICKEKDVLLIIDEV 145 usage_00145.pdb 92 YAFEQ--FG---DDIACVIVEPVAG-NGVVPPQPG----FLEGLREVTEQNGALLIFDEV 141 usage_00194.pdb 112 RVT--WELS---ETIAAFI-EPIITGGGI------LAPQDYKAVHETCQKHGALLISDEV 159 usage_00219.pdb 98 AVM-----D---DHTCAVVVEPIQGAGGVQAATPE----FLKGLRDLCDEHQALLVFDEV 145 usage_00245.pdb 97 TALNE--CKKTGDDVAAVILEPIQGEGGVILPPPG----YLTAVRKLCDEFGALMILDEV 150 Epi g gGv l c aLl DEV usage_00013.pdb 146 QCGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFPVSAMLTT-QEIASA---F--HV--- 195 usage_00048.pdb 146 QCGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFPVSAMLTT-QEIASA---F--HV--- 195 usage_00055.pdb 146 QTGIGRTGEFYAYQHFNLKPDVIALAKGLG-GGVPIGAILAR-EEVAQS---F--TP--- 195 usage_00145.pdb 142 -TG-FRVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYGGK-AEIR-QVAP--S-G--- 190 usage_00194.pdb 160 ICGFGRTGKAFGF-NYDVKPDIITA-KGITSAYLPLSATAVK-REIYEA---FKG-KGEY 212 usage_00219.pdb 146 QCGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFPVSAMLTT-QEIASA---F--HV--- 195 usage_00245.pdb 151 QTGMGRTGKMFACEHENVQPDILCLAKALG-GGVMPIGATIATEEVFSV---LFDNP--- 203 G gRtg v PD K g gg p a E usage_00013.pdb 196 -G-SHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQ- 245 usage_00048.pdb 196 -G-SHGSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQAIDEQ- 245 usage_00055.pdb 196 -G-SHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLK--EL---- 240 usage_00145.pdb 191 -PIYQAGTLSGNPLA-AAGYETLVQL-TPESYVEFERKAE-LEAGLRKAAEKH 239 usage_00194.pdb 213 EFFRHINTFGGNPAACALALKNLEIIENENLIERSAQGSLLLEQLKEE----- 260 usage_00219.pdb 196 -G-SHGSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQAIDEQ- 245 usage_00245.pdb 204 -F-LHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLARE- 253 h T gGNPlA a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################