################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:50 2021 # Report_file: c_0822_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00091.pdb # 2: usage_00092.pdb # 3: usage_00093.pdb # 4: usage_00094.pdb # 5: usage_00095.pdb # 6: usage_00212.pdb # 7: usage_00213.pdb # 8: usage_00214.pdb # 9: usage_00217.pdb # 10: usage_00218.pdb # # Length: 91 # Identity: 47/ 91 ( 51.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 91 ( 51.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 91 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00091.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00092.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00093.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00094.pdb 1 -EEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 59 usage_00095.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00212.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00213.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00214.pdb 1 NEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAG 60 usage_00217.pdb 1 HEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEAS 60 usage_00218.pdb 1 HEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEAS 60 EE TE R I SYK LPLNLY IQ K RDE R R G RGREF MKD YSF DEA usage_00091.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00092.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00093.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00094.pdb 60 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 86 usage_00095.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00212.pdb 61 ARKSYNKMFVAYLRTFARMGLKAI------- 84 usage_00213.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00214.pdb 61 ARKSYNKMFVAYLRTFARMGLKAIPMR---- 87 usage_00217.pdb 61 LDQSYRDYEKAYSRIFERCGLEFRAIIGDGG 91 usage_00218.pdb 61 LDQSYRDYEKAYSRIFERCGLEFRAIIGDGG 91 SY AY R F R GL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################