################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:10 2021 # Report_file: c_0226_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00022.pdb # 2: usage_00023.pdb # 3: usage_00029.pdb # 4: usage_00031.pdb # # Length: 119 # Identity: 95/119 ( 79.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/119 ( 93.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/119 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 -DAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIV 59 usage_00023.pdb 1 -DAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDNLIV 59 usage_00029.pdb 1 D--AGFDVSH-TIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSG-LNASGGVIDDLIV 56 usage_00031.pdb 1 -DAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIV 59 gmFDVSH TIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSG LNASGGVIDdLIV usage_00022.pdb 60 YYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF 118 usage_00023.pdb 60 YYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAAT-- 116 usage_00029.pdb 57 YYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSIAVQGPNAQAKAAT--- 112 usage_00031.pdb 60 YYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAAT-- 116 YYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSmiavqgpnaqakAa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################