################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:36 2021 # Report_file: c_0110_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00035.pdb # 2: usage_00044.pdb # 3: usage_00071.pdb # 4: usage_00079.pdb # 5: usage_00080.pdb # 6: usage_00172.pdb # 7: usage_00173.pdb # 8: usage_00201.pdb # # Length: 245 # Identity: 18/245 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/245 ( 17.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 130/245 ( 53.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 ----RGRFQHWSEVIMSTT---AY--SKEEAVSADASIRAYLADLVSARRAAPHDDLLGV 51 usage_00044.pdb 1 --------RHSMHTW-T-------------------EMNAYFSDLIGLRSDSAGEDVTSL 32 usage_00071.pdb 1 ---DRERVHSWTRQI----ISTSG--GAEAAERAKRGLYGWITETVRARAGSEGGDVYSM 51 usage_00079.pdb 1 ----RHSMHTWTQLILS-S---SH--GAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSL 50 usage_00080.pdb 1 ----RHSMHTWTQLILS-S---SH--GAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSL 50 usage_00172.pdb 1 PATDRHSMHTWTQLILS-S---SH--GAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSL 54 usage_00173.pdb 1 ----RHSMHTWTQLILS-S---SH--GAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSL 50 usage_00201.pdb 1 ------------------------PAAVAESQRAYGETLGLITEVVE----T-SDTLLGE 31 d usage_00035.pdb 52 LVSARDDDDRLTEDELITF-GVT---------------------LL-VA---GHETSAHQ 85 usage_00044.pdb 33 LGA-A--------------VGRD-EITLSEAVG------------LAVLLQIGGEAVTNN 64 usage_00071.pdb 52 LGA-A--------------VGRG-EVGETEAVG------------LAGPLQIGGEAVTHN 83 usage_00079.pdb 51 LGA-A--------------VGRD-EITLSEAVG------------LAVLLQIGGEAVTNN 82 usage_00080.pdb 51 LGA-A--------------VGRD-EITLSEAVG------------LAVLLQIGGEAVTNN 82 usage_00172.pdb 55 LGA-A--------------VGRD-EITLSEAVG------------LAVLLQIGGEAVTNN 86 usage_00173.pdb 51 LGA-A--------------VGRD-EITLSEAVG------------LAVLLQIGGEAVTNN 82 usage_00201.pdb 32 ILR-T--------------LKAEHMD-------TIEASRQIVLSLI-LG---GYETTSWL 65 l g l G E usage_00035.pdb 86 LGNMVYALLTHEDQLSLLREQPELLPRAVEELLRFVPLGNGVGNARIALEDVELSGGTVR 145 usage_00044.pdb 65 SGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIR 124 usage_00071.pdb 84 VGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIA 143 usage_00079.pdb 83 SGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIR 142 usage_00080.pdb 83 SGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIR 142 usage_00172.pdb 87 SGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIR 146 usage_00173.pdb 83 SGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIR 142 usage_00201.pdb 66 VANTIHALLAHPDTLARVRQDPSLLPAAIEEGMRWCPSSF--GVLRMVERDVRLDDQALS 123 g m LL r R P p A EllRw p G RialeDVe g usage_00035.pdb 146 AGEGVVAAAVNANRDPRAFDDPDRLDITREKNP-HLAFGHGAHYCLGAQLARMELRVAIG 204 usage_00044.pdb 125 AGDAVYVSYLAANRDPEVFPDPDRIDFERSPNP-HVSFGFGPHYCPGGMLARLESELLVD 183 usage_00071.pdb 144 AGEPVYVSYLAANRDPDVFP---------------------------------------- 163 usage_00079.pdb 143 AGDAVYVSYLAANRDPEVFPDPDRIDFERSPNP-HVSFGFGPHYCPGGMLARLESELLVD 201 usage_00080.pdb 143 AGDAVYVSYLAANRDPEVFPDPDRIDFERSPNP-HVSFGFGPHYCPGGMLARLESELLVD 201 usage_00172.pdb 147 AGDAVYVSYLAANRDPEVFPDPDRIDFERSPNP-HVSFGFGPHYCPGGMLARLESELLVD 205 usage_00173.pdb 143 AGDAVYVSYLAANRDPEVFPDPDRIDFERSPNP-HVSFGFGPHYCPGGMLARLESELLVD 201 usage_00201.pdb 124 AGTVVCLAGIAGNYDETAYPSPEVYDIDRKPLPAANVFG--------------------- 162 AG V aaNrDp fp usage_00035.pdb 205 GLLER 209 usage_00044.pdb 184 AVLDR 188 usage_00071.pdb ----- usage_00079.pdb 202 AVLDR 206 usage_00080.pdb 202 AVLDR 206 usage_00172.pdb 206 AVLDR 210 usage_00173.pdb 202 AVLDR 206 usage_00201.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################