################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:38 2021 # Report_file: c_1192_29.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00122.pdb # 2: usage_00193.pdb # 3: usage_00194.pdb # 4: usage_00217.pdb # 5: usage_00218.pdb # 6: usage_00250.pdb # 7: usage_00702.pdb # 8: usage_01717.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 33 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 33 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 VVASFDATFTFLIKSPD---REPADGITFFIAN 30 usage_00193.pdb 1 -GSVASFSTSFTFVVKAPNPDITSDGLAFYLAP 32 usage_00194.pdb 1 -GSVASFSTSFTFVVKAPNPDITSDGLAFYLAP 32 usage_00217.pdb 1 VVASFDATFTFLIKSPD---REPADGITFFIAN 30 usage_00218.pdb 1 VVASFDATFTFLIKSPD---REPADGITFFIAN 30 usage_00250.pdb 1 VVASFEATFTFLIKSPD---SHPADGIAFFISN 30 usage_00702.pdb 1 GSEYLATSFALYTRSQ----NRKS-LFGYFFWV 28 usage_01717.pdb 1 -VASFEATFTFLIKSPD---SHPADGIAFFISN 29 f g f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################