################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:16 2021 # Report_file: c_0122_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00008.pdb # 3: usage_00023.pdb # 4: usage_00024.pdb # 5: usage_00047.pdb # 6: usage_00079.pdb # 7: usage_00099.pdb # 8: usage_00103.pdb # 9: usage_00104.pdb # 10: usage_00136.pdb # # Length: 190 # Identity: 52/190 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/190 ( 59.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/190 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QWVLTAAHCFDGLPLQDVWRIYSGILNLSDITKD---TPFSQIKEIIIHQNYKVSEGNHD 57 usage_00008.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00023.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00024.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00047.pdb 1 ------------------DVVVAGEFDQGSS---SEKIQKLKIAKVFKNSKYNSLTINND 39 usage_00079.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00099.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQAEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00103.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00104.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQSEIKED---TSFFGVQEIIIHDQYKMAESGYD 57 usage_00136.pdb 1 QWILTAAHCFYGVESPKILRVYSGILNQAEIAED---TSFFGVQEIIIHDQYKMAESGYD 57 rvysGilnq i t f eiiih Yk e D usage_00001.pdb 58 IALIKLQAPLNYTEFQKPISLPSKGDTS-TIYTNCWVTGWGFSKEKGEIQNILQKVNIPL 116 usage_00008.pdb 58 IALLKLETTVNYTDSQRPISLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00023.pdb 58 IALLKLETTVGYGDSQRPICLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00024.pdb 58 IALLKLETTVGYGDSQRPICLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00047.pdb 40 ITLLKLSTAASFSQTVSAVCLPSASDDFAAG-TTCVTTGWGLTRY-N-TPDRLQQASLPL 96 usage_00079.pdb 58 IALLKLETTVNYTDSQRPICLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00099.pdb 58 IALLKLETTVNYADSQRPICLPSKGDRN-VIYTDCWVTGWGYRALRDKIQNTLQKAKIPL 116 usage_00103.pdb 58 IALLKLETTVGYGDSQRPICLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00104.pdb 58 IALLKLETTVGYGDSQRPICLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 usage_00136.pdb 58 IALLKLETTVNYADSQRPISLPSKGDRN-VIYTDCWVTGWGYRKLRDKIQNTLQKAKIPL 116 IaLlKL t y q pi LPSkgD i T CwvTGWG iqn LQka iPL usage_00001.pdb 117 VTNEECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGC 176 usage_00008.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00023.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00024.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00047.pdb 97 LSNTNCKKYWGTKI-KDAMICAGA-S-GVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSST 153 usage_00079.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00099.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00103.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00104.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 usage_00136.pdb 117 VTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGC 176 vtNeeCqKry k t MiCAGy e GkdaCkGDSGGPL CKhN W LVGItSWGegc usage_00001.pdb 177 ARREQPGVYT 186 usage_00008.pdb 177 AQRERPGVYT 186 usage_00023.pdb 177 AQRERPGVYT 186 usage_00024.pdb 177 AQRERPGVYT 186 usage_00047.pdb 154 CSTSTPGVYA 163 usage_00079.pdb 177 AQRERPGVYT 186 usage_00099.pdb 177 AQRERPGVYT 186 usage_00103.pdb 177 AQRERPGVYT 186 usage_00104.pdb 177 AQRERPGVYT 186 usage_00136.pdb 177 AQRERPGVYT 186 a re PGVYt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################