################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:26 2021 # Report_file: c_0722_35.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00040.pdb # 2: usage_00197.pdb # 3: usage_00384.pdb # 4: usage_00385.pdb # 5: usage_00412.pdb # 6: usage_00413.pdb # # Length: 83 # Identity: 23/ 83 ( 27.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 83 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 83 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 GEILPYEA-LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRA 59 usage_00197.pdb 1 -EWLRPED-LPIKYAGLSTCFRQEVGSHG--TRGIFRVHQFEKIEQFVYSSPHDNKSWEM 56 usage_00384.pdb 1 NEILDGKD-LPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPE--ESWEW 57 usage_00385.pdb 1 NEILDGKD-LPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPE--ESWEW 57 usage_00412.pdb 1 GRWFTE-LKEPLKYAGMSTCFRKEA-------LGIFRVHQFDKIEQFVVCSPRQEESWRH 52 usage_00413.pdb 1 GRWFTE-LKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRH 59 Pl Y G s cFR Ea GifRVHQF K EQfV p Sw usage_00040.pdb 60 FQELLENAEEILRLLELPYRLVE 82 usage_00197.pdb 57 FEEMITTAEEFYQSLGIPYHIVN 79 usage_00384.pdb 58 HEKIIRNAEELFQELEIPYRVVN 80 usage_00385.pdb 58 HEKIIRNAEELFQELEIPYRVVN 80 usage_00412.pdb 53 LEDMITTSEEFNKSLGLPYRVVN 75 usage_00413.pdb 60 LEDMITTSEEFNKSLGLPYRVVN 82 e i EE L PYr Vn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################