################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:53 2021 # Report_file: c_1387_61.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00155.pdb # 4: usage_00156.pdb # 5: usage_00157.pdb # 6: usage_00158.pdb # 7: usage_00444.pdb # 8: usage_01657.pdb # 9: usage_01799.pdb # 10: usage_02013.pdb # # Length: 56 # Identity: 36/ 56 ( 64.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 56 ( 64.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 56 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 MNFVQDLCEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSPFQLVQI 56 usage_00109.pdb 1 -NFVQDLCEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSPFQLVQI 55 usage_00155.pdb 1 -NFVKDLEEDLYELFKKDPGFDRGQFHKQIAV-RGQILNLTQALKDNKSPLHLVQ- 53 usage_00156.pdb 1 ---VKDLEEDLYELFKKDPGFDRGQFHKQIAV-RGQILNLTQALKDNKSPLHLVQ- 51 usage_00157.pdb 1 --FVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 54 usage_00158.pdb 1 -NFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 55 usage_00444.pdb 1 PNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 56 usage_01657.pdb 1 PNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 56 usage_01799.pdb 1 PNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 56 usage_02013.pdb 1 PNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQM 56 V DL EDLYELFK D GFD F Q V RGQILNLTQAL D KSP LVQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################