################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:00 2021 # Report_file: c_0877_23.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00003.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00214.pdb # 5: usage_00219.pdb # 6: usage_00309.pdb # # Length: 93 # Identity: 45/ 93 ( 48.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 93 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 93 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 APEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSHKF 60 usage_00048.pdb 1 APEVVNNEKYTFSPDWWGLGCLIYEMIQGHSPFKKYKEKVKWEEVDQRIKNDTEEYSEKF 60 usage_00049.pdb 1 APEVVNNEKYTFSPDWWGLGCLIYEMIQGHSPFKKYKEKVKWEEVDQRIKNDTEEYSEKF 60 usage_00214.pdb 1 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ---KKIKREEVERLVKEVPEEYSERF 57 usage_00219.pdb 1 APEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSHKF 60 usage_00309.pdb 1 APEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSHKF 60 APEV nN Y SPD WgLGCLiYEMI G SPF eKvK EEVd r E YS kF usage_00003.pdb 61 SEEAKSICKMLLTKDAKQRLGCQEEGAAEVKRH 93 usage_00048.pdb 61 SEDAKSICRMLLTKNPSKRLGCRGEGAAGVKQH 93 usage_00049.pdb 61 SEDAKSICRMLLTKNPSKRLGCRGEGAAGVKQ- 92 usage_00214.pdb 58 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 90 usage_00219.pdb 61 SEEAKSICKMLLTKDAKQRLGCQEEEAAEVKRH 93 usage_00309.pdb 61 SEEAKSICKMLLTKDAKQRLGCQEEEAAEVKRH 93 Se AkSiC mLLtK RLGC e Aa VK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################