################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:07 2021 # Report_file: c_1123_34.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00166.pdb # 4: usage_00167.pdb # 5: usage_00250.pdb # 6: usage_00309.pdb # 7: usage_00482.pdb # 8: usage_00631.pdb # # Length: 115 # Identity: 26/115 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/115 ( 25.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/115 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 MMRPILVLLVARLYGAVT-PATLHAAVSLELLHTASLVHDDVV--DS---------VNAI 48 usage_00022.pdb 1 MMRPILVLLVARLYGAVT-PATLHAAVSLELLHTASLVHDDVV-------------AIF- 45 usage_00166.pdb 1 -LRPLLTVLAARALNIQT-EQHHTLAAIIEFIHTATLLHDDVV--D----------TANE 46 usage_00167.pdb 1 -LRPLLTVLAARALNIQT-EQHHTLAAIIEFIHTATLLHDDVV--D-ESTMRRGRETANE 55 usage_00250.pdb 1 --RPIMCLLAARACDLDNMQNAQRLAAIIEMLHTATLVHDDVVDW--------------- 43 usage_00309.pdb 1 -IRPMIAVLAARAVGYEG-NAHVTIAALIEFIHTATLLHDDVVD---ES----------D 45 usage_00482.pdb 1 --RPMLTLAAARLVGYGG-PFHVHLAATVEFIHTATLLHDDV---------RRGRPTANL 48 usage_00631.pdb 1 -IRPMIAVLAARAVGYEG-NAHVTIAALIEFIHTATLLHDDVVD---ES----------D 45 RP l AR A E HTA L HDDV usage_00021.pdb 49 F-NNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQLS----- 97 usage_00022.pdb 46 --NNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNH 98 usage_00166.pdb 47 VFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNC--- 98 usage_00167.pdb 56 VFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNC--- 107 usage_00250.pdb 44 --NNQTAVLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQ--- 93 usage_00309.pdb 46 -FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNV--- 96 usage_00482.pdb 49 LWDNKSSVLVGDYLFARSFQLMTDTGNMRVMEILANASAVIAEGEVLQLT----- 98 usage_00631.pdb 46 -FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNV--- 96 N sVL GD s AEGE LQL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################