################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:27 2021 # Report_file: c_0343_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00019.pdb # 4: usage_00022.pdb # # Length: 140 # Identity: 23/140 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/140 ( 31.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/140 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -------ELELSSEATFLSKTSIGEIT---AGE-----------KGLNPMELLLVSIG-- 37 usage_00012.pdb 1 EVKEV--ELELSSEATFLSKTSIGEIT---AGE-----------KGLNPMELLLVSIG-- 42 usage_00019.pdb 1 -----HHQARWIGN--FHVRTDSNHDVLDTKEEVGGK------DAAPRPLELVLTGLGCT 47 usage_00022.pdb 1 -------RVKWVEGLTFLGESASGHQIL---------MDGNSGDKAPSPMEMVLMAAG-- 42 Fl t g k PmEl L G usage_00011.pdb 38 SCSGVDVYHILKKK---RQEVKDIKIFLKGKRREKHPKIYEEIEI-KYVAVGK--VEEKA 91 usage_00012.pdb 43 SCSGVDVYHILKKK---RQEVKDIKIFLKGKRREKHPKIYEEIEI-KYVAVGK--VEEKA 96 usage_00019.pdb 48 ----GDVVSILRKKVID---QKDFRIEIEYERTEEHPRIFTKVHL-KYIFKFDGEPPKDK 99 usage_00022.pdb 43 GCSAIDVVSILQKG---RQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRD--LKDAA 94 DV IL Kk vkD i l RrE i i kyv a usage_00011.pdb 92 LEQAVKLSTEKYCSVLAMV- 110 usage_00012.pdb 97 LEQAVKLSTEKYCSVLAMV- 115 usage_00019.pdb 100 VEKAVQLSQEKYCSVSAI-L 118 usage_00022.pdb 95 VARAVDLSAEKYCSVALMLE 114 e AV LS EKYCSV am #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################