################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:16 2021 # Report_file: c_0393_24.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00024.pdb # 2: usage_00039.pdb # 3: usage_00041.pdb # 4: usage_00077.pdb # # Length: 94 # Identity: 7/ 94 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 94 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 94 ( 33.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 NPIEVPQGAEIVFKITSPDVIHGFHVEG-TNI---------------NVEV--LPGEVST 42 usage_00039.pdb 1 --FSVASGEEIVF-CNNAGFPHNVVFDEDEI-P--SGVDAAKISMSEEDLL--NA-PGEC 51 usage_00041.pdb 1 --FSISPGEKIVF-KNNAGFPHNIVFDEDSI-P--SGVDASKISMSEEDLL--NA-KGET 51 usage_00077.pdb 1 PELHVKVGDTVTW-INREAMPHNVHFVAGVL-GEA------------ALKGPMMK-KEQA 45 v G ivf n pHn f usage_00024.pdb 43 VRYTFKRPGEYRIICNQYCGLGH-QNMFGTIVVK 75 usage_00039.pdb 52 YKVTLTEKGTYKFYCSPH----QGAGMVGKVTVN 81 usage_00041.pdb 52 FEVALSNKGEYSFYCSPH----QGAGMVGKVT-- 79 usage_00077.pdb 46 YSLTFTEAGTYDYHCTPH----P--FMRGKVVVE 73 t G Y C ph M Gkv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################