################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:28 2021 # Report_file: c_0787_177.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00871.pdb # 2: usage_01162.pdb # 3: usage_01220.pdb # # Length: 106 # Identity: 3/106 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/106 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/106 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00871.pdb 1 HKFTVDLPKK-HGRGGQSALRFARLREEKRHN--YVRKVAEVAVQNFITNDKVN-VKG-- 54 usage_01162.pdb 1 -KFTVDLPKK-HGRGGQSALRFARLRMEKRHN--YVRKVAETAVQLFISGDKVN-VAG-- 53 usage_01220.pdb 1 NSFAVPFDEDDKD-------DSVW--------FLDHDYLENMYGMFKKV-----NARERI 40 kFtVdlpkk hg rfar yvrkvae avq fi v g usage_00871.pdb 55 LILAG--------SADFKTDLAKSELFDPRLACKVISIVDVS---- 88 usage_01162.pdb 54 LVLAG--------SADFKTELSQSDMFDQRLQSKVLKLVDIS---- 87 usage_01220.pdb 41 VGWYHTGPKLHKNDIAINELMKRY----------CPNSVLVIIDVK 76 l lag sadfkt l s v Vdvs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################