################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:11 2021 # Report_file: c_1310_36.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00020.pdb # 2: usage_00024.pdb # 3: usage_00046.pdb # 4: usage_00084.pdb # 5: usage_00085.pdb # 6: usage_00090.pdb # 7: usage_00161.pdb # 8: usage_00181.pdb # 9: usage_00389.pdb # 10: usage_00440.pdb # 11: usage_00454.pdb # 12: usage_00547.pdb # 13: usage_00582.pdb # 14: usage_00623.pdb # 15: usage_00631.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 35 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 35 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00024.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00046.pdb 1 ---DAKDIVRLLEEQGET-ARIIGRTVQ------- 24 usage_00084.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00085.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00090.pdb 1 -VKQAEALDEMLEKKGLK-VD-HVLLF-------- 24 usage_00161.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00181.pdb 1 -VPQAEALDQLLADMGRK-IE-HVLNIQV-----E 27 usage_00389.pdb 1 TFGDFWRMIWEQR---SA-T--VVMMTK-LEER-- 26 usage_00440.pdb 1 -IPQAEKLDQMLKEQGTP-LE-KAIELKV------ 26 usage_00454.pdb 1 -VAQAEALETMLADIGRK-LD-YVIHIDV-----R 27 usage_00547.pdb 1 -VAQAEALEEILEEMGRP-ID-YVINIQV-----D 27 usage_00582.pdb 1 -VAQAEALEEILEEYGKP-ID-YVINIEV-----D 27 usage_00623.pdb 1 -VAQAEALEEILEDIGRK-ID-YVIHIDV-----R 27 usage_00631.pdb 1 -----GAAKAVGLVLPELKGK-LDGVAIR----VP 25 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################