################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:37 2021 # Report_file: c_1131_35.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00065.pdb # 2: usage_00066.pdb # 3: usage_00110.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00385.pdb # 7: usage_00399.pdb # 8: usage_00400.pdb # 9: usage_00401.pdb # 10: usage_00442.pdb # 11: usage_00500.pdb # 12: usage_00601.pdb # 13: usage_00603.pdb # # Length: 74 # Identity: 55/ 74 ( 74.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 74 ( 74.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 74 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 TIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 60 usage_00066.pdb 1 -------FVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 53 usage_00110.pdb 1 -------FVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 53 usage_00115.pdb 1 -------FVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 53 usage_00116.pdb 1 ----FQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 56 usage_00385.pdb 1 TIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 60 usage_00399.pdb 1 -------FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNA 53 usage_00400.pdb 1 -------FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNA 53 usage_00401.pdb 1 -------FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNA 53 usage_00442.pdb 1 ----FQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 56 usage_00500.pdb 1 ---KFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA 57 usage_00601.pdb 1 -------FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNA 53 usage_00603.pdb 1 -------FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNA 53 FVPAIQHEVRKFMA NW DEG INLLEDC MIINTACQCLFGEDLRKRL A usage_00065.pdb 61 RRFAQLLAKMESSL 74 usage_00066.pdb 54 RRFAQLLAKMES-- 65 usage_00110.pdb 54 RRFAQLLAKMESSL 67 usage_00115.pdb 54 RRFAQLLAKMESSL 67 usage_00116.pdb 57 RRFAQLLAKMESSL 70 usage_00385.pdb 61 RRFAQLLAKMES-- 72 usage_00399.pdb 54 RHFAQLLSKMESSL 67 usage_00400.pdb 54 RHFAQLLSKMESS- 66 usage_00401.pdb 54 RHFAQLLSKMESS- 66 usage_00442.pdb 57 RRFAQLLAKMES-- 68 usage_00500.pdb 58 RRFAQLLAKMESSL 71 usage_00601.pdb 54 RHFAQLLSKMESS- 66 usage_00603.pdb 54 RHFAQLLSKME--- 64 R FAQLL KME #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################