################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:20 2021 # Report_file: c_0952_88.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00288.pdb # 2: usage_00290.pdb # 3: usage_00292.pdb # 4: usage_00294.pdb # 5: usage_00296.pdb # 6: usage_00297.pdb # 7: usage_00907.pdb # 8: usage_01408.pdb # 9: usage_01409.pdb # # Length: 50 # Identity: 2/ 50 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 50 ( 34.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 50 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 -SIATDPVDP-NRVYIVAGYT-NDWL-PNGAILRSTDRG--ETWEKTILP 44 usage_00290.pdb 1 -SIATDPVDP-NRVYIVAGYT-NDWL-PNGAILRSTDRG--ETWEKTILP 44 usage_00292.pdb 1 -SIATDPVDP-NRVYIVAGYT-NDWL-PNGAILRSTDRG--ETWEKTILP 44 usage_00294.pdb 1 -SIATDPVDP-NRVYIVAGYT-NDWL-PNGAILRSTDRG--ETWEKTILP 44 usage_00296.pdb 1 -SIATDPVDP-NRVYIVAGMYTNDWLPNMGAILRSTDRG--ETWEKTILP 46 usage_00297.pdb 1 -SIATDPVDP-NRVYIVAGMYTNDWLPNMGAILRSTDRG--ETWEKTILP 46 usage_00907.pdb 1 --NIILDDM-DGCRVEFNLPG--ENNE-AGQVIVRVSKGDHSETREIP-- 42 usage_01408.pdb 1 VSLASDTVDP-DNVYAAVGTYTNSWDPTDGAVLRSSDRG--ASWKAATLP 47 usage_01409.pdb 1 -SLASDTVDP-DNVYAAVGTYTNSWDPTDGAVLRSSDRG--ASWKAATLP 46 a d vd vy g w Ga lrs drG w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################