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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:21:13 2021
# Report_file: c_0276_4.html
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#====================================
# Aligned_structures: 15
#   1: usage_00003.pdb
#   2: usage_00006.pdb
#   3: usage_00016.pdb
#   4: usage_00020.pdb
#   5: usage_00021.pdb
#   6: usage_00022.pdb
#   7: usage_00023.pdb
#   8: usage_00024.pdb
#   9: usage_00035.pdb
#  10: usage_00038.pdb
#  11: usage_00039.pdb
#  12: usage_00042.pdb
#  13: usage_00043.pdb
#  14: usage_00053.pdb
#  15: usage_00054.pdb
#
# Length:        115
# Identity:       26/115 ( 22.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     36/115 ( 31.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/115 ( 15.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00003.pdb         1  EIVMTQSPGTLSLSPGERATLSCRASQSVS-M----NYLAWFQQKPGQAPRLLIYGASRR   55
usage_00006.pdb         1  --ELTQSPATLSLSPGERATLSCRASQSVG------RNLGWYQQKPGQAPRLLIYDASNR   52
usage_00016.pdb         1  -IVLTQSPATLSVTPGESVSLSCRASQSIS------NNLHWYQQKSHESPRLLIKYASQS   53
usage_00020.pdb         1  DIVLTQSPATMSASLGQRVSMSCSASSSVS-T----SYFHWYQQKPGSSPKLWIYSTSNL   55
usage_00021.pdb         1  DILLTQSPAILSVSPGERVSFSCRASQSIG------TDIHWYQQRTNGSPRLLIKYASES   54
usage_00022.pdb         1  -IQLTQSPAFMAASPGEKVTITCSVSSSIS-S----SNLHWYQQKSETSPKPWIYGTSNL   54
usage_00023.pdb         1  -IVMTQSPASLAVSLGQRATISCRASENVDK--YGNSFMHWYQQKPGQPPKLLIYRASEL   57
usage_00024.pdb         1  -IVMTQSPASLAVSLGQRATISCRASENVDK--YGNSFMHWYQQKPGQPPKLLIYRASEL   57
usage_00035.pdb         1  --VLTQSPAIMSASLGERVTMTCTASSSVS-S----SNLHWYQQKPGSSPKLWIYSTSNL   53
usage_00038.pdb         1  EVVLTQSPGTLALPPGERATLSCRASHRVG-S----TYIAWYQQKSGQAPRRLIYGASNR   55
usage_00039.pdb         1  EIVLTQSPGTLSLSPGERATLSCRASQSVS-S----SYLAWYQQKPGQAPRLLIYGASSR   55
usage_00042.pdb         1  EIVLTQSPGTLSLSPGERATLSCRASQSVF-S----TFLAWYQQKPGQAPRLLIYAASRR   55
usage_00043.pdb         1  --ELTQSPATLSLSPGERATLSCRASQSVG------RNLGWYQQKPGQAPRLLIYDASNR   52
usage_00053.pdb         1  -LVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTR   59
usage_00054.pdb         1  --VLTQSPGTLSLSPGETAIISCRTSQYG--------SLAWYQQRPGQAPRLVIYSGSTR   50
                               tQSP       G      C  S              WyQQ     P   I   S  

usage_00003.pdb        56  ATGIPDRISGSGSGTDFTLTISRLEPADFAVYYCQQYGTSPRTFGQGAKVE----  106
usage_00006.pdb        53  ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQARLLLPQTFGQGTKVEI---  104
usage_00016.pdb        54  ISGIPSRFSGSGSGTDFTLSINSVETEDFGMYYCQQSNSWPLTFGAGTKLEL---  105
usage_00020.pdb        56  ASGVPGRFSGSGSGTSYSLSISSMEAEDAATYYCHQFHRSPLTFGAGTKLEL---  107
usage_00021.pdb        55  ISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA  109
usage_00022.pdb        55  ASGVPVRFSGSGSGTSYSLTISSMEAEDAATYYCQQWNSYPYTFGGGTKLEI---  106
usage_00023.pdb        58  QWGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQRSNEVPWTFGQGTKLEI---  109
usage_00024.pdb        58  QWGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQRSNEVPWTFGQGTKLEI---  109
usage_00035.pdb        54  ASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPYTFGGGTKLEI---  105
usage_00038.pdb        56  ATDIPDRFSGSGSGTDFTLTIRRLEPEDSAVYYCQQFSVSPWTFGQGTRVEI---  107
usage_00039.pdb        56  ATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGQGTKVEI---  107
usage_00042.pdb        56  AAGIPDRFSGSESGTDFTLTISRLEPEDFAVYYCQQSESSPWTFGQGTKVDI---  107
usage_00043.pdb        53  ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQARLLLPQTFGQGTKVEI---  104
usage_00053.pdb        60  ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEI---  111
usage_00054.pdb        51  AAGIPDRFSGSRWGPDYTLTISNLESGDFGVYYCQQY----EFFGQGTKVQVDIK  101
                             g P RfsGS sGt   L I      D   YYC        tFG Gtk      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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