################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:49 2021 # Report_file: c_1148_331.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00349.pdb # 2: usage_02348.pdb # 3: usage_02434.pdb # 4: usage_02436.pdb # 5: usage_02438.pdb # 6: usage_02613.pdb # 7: usage_02860.pdb # 8: usage_03826.pdb # 9: usage_03859.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 48 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 48 ( 68.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00349.pdb 1 --PYMLVCGDK-EVE---S---GKVAVR-TR--R--GKDLG------- 27 usage_02348.pdb 1 D-RTTIFLL---DEE---K---QELWSI-V---AAGSLEIRIP----- 29 usage_02434.pdb 1 DTRVTSAVL---DEE---G---LRWTVR-TD--R--GDEVSAR----- 29 usage_02436.pdb 1 DTRVTSAVL---DEE---G---LRWTVR-TD--R--GDEVS------- 27 usage_02438.pdb 1 DTRVTSAVL---DEE---G---LRWTVR-TD--R--GDEVSAR----- 29 usage_02613.pdb 1 --A-KRVLN---VVCKHCG----QKTTTLTG--V--E------AVMYM 28 usage_02860.pdb 1 NNYITTSIK---V-E--------DTLVC-GTNNG--NPKCW-K----- 27 usage_03826.pdb 1 DTRVTSAVL---DEE---G---LRWTVR-TD--R--GDEVSAR----- 29 usage_03859.pdb 1 --LTRVLGI--QL------GNTGTDYCV-NE--D--GDWEIVA----- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################