################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:25 2021 # Report_file: c_1266_32.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00045.pdb # 2: usage_00125.pdb # 3: usage_00126.pdb # 4: usage_00142.pdb # 5: usage_00143.pdb # 6: usage_00262.pdb # 7: usage_00263.pdb # 8: usage_00264.pdb # 9: usage_00265.pdb # 10: usage_00690.pdb # 11: usage_00754.pdb # 12: usage_00774.pdb # # Length: 39 # Identity: 7/ 39 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 39 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 39 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 -PGGSLDAGETPTQAALREAQEEVALDPAAVT--LLG-- 34 usage_00125.pdb 1 PPKGHVEPGEDDLETALRATQEEAGIEAGQLT--IIEG- 36 usage_00126.pdb 1 PPKGHVEPGEDDLETALRATQEEAGIEAGQLT--IIEG- 36 usage_00142.pdb 1 PPKGHVEPGEDDLETALRATQEEAGIEAGQLT--IIEG- 36 usage_00143.pdb 1 PPKGHVEPGEDDLETALRATQEEAGIEAGQLT--IIEG- 36 usage_00262.pdb 1 PPKGHVEPGEDDLETALRETQEEAGIEAGQLT--IIEG- 36 usage_00263.pdb 1 PPKGHVEPGEDDLETALRETQEEAGIEAGQLT--IIEG- 36 usage_00264.pdb 1 PPKGHVEPGEDDLETALRETQEEAGIEAGQLT--IIEG- 36 usage_00265.pdb 1 PPKGHVEPGEDDLETALRETQEEAGIEAGQLT--IIEG- 36 usage_00690.pdb 1 PPKGHVDPGEDEWQAAIRETKEEANITKEQLT--IHED- 36 usage_00754.pdb 1 SVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQ 39 usage_00774.pdb 1 --KGHVEPGEDDLETALRATQEEAGIEAGQLT--IIEG- 34 G v GE A R EE i t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################