################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:06 2021 # Report_file: c_1366_77.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00001.pdb # 2: usage_00014.pdb # 3: usage_00022.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00107.pdb # 7: usage_00135.pdb # 8: usage_00151.pdb # 9: usage_00200.pdb # 10: usage_00206.pdb # 11: usage_00245.pdb # 12: usage_00253.pdb # 13: usage_00254.pdb # 14: usage_00319.pdb # 15: usage_00350.pdb # 16: usage_00393.pdb # 17: usage_00394.pdb # 18: usage_00466.pdb # 19: usage_00557.pdb # 20: usage_00770.pdb # 21: usage_00771.pdb # 22: usage_00827.pdb # 23: usage_00972.pdb # 24: usage_01013.pdb # 25: usage_01048.pdb # 26: usage_01068.pdb # 27: usage_01104.pdb # 28: usage_01152.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 52 ( 5.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 52 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------NGVRLALYFERKAPTI------KSGLDFLADDALA---QVFRTTFN 37 usage_00014.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00022.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00041.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00042.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00107.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00135.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00151.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00200.pdb 1 ----NKLKASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 39 usage_00206.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00245.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00253.pdb 1 --EHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 41 usage_00254.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00319.pdb 1 --------ASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 35 usage_00350.pdb 1 -------KASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 36 usage_00393.pdb 1 ---------REAVDFLEQIL-TFSPMDRLTAEEAL-S---H---PYMSIYS- 34 usage_00394.pdb 1 ---------REAVDFLEQIL-TFSPMDRLTAEEAL-S---H---PYMSIYS- 34 usage_00466.pdb 1 -SEHNKLKASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 42 usage_00557.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00770.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00771.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00827.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_00972.pdb 1 -------KASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 36 usage_01013.pdb 1 QPHIEECVRQMGDILSQ-VK---------SVAQDA-D---NVLQPIMDLLD- 37 usage_01048.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_01068.pdb 1 -------KASQARDLLSKML-VIDASKRISVDEAL-Q---H---PYINVWY- 36 usage_01104.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 usage_01152.pdb 1 -SEHNKLKASQARDLLSKML-VIDPAKRISVDDAL-Q---H---PYINVWY- 42 a l p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################