################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:17 2021 # Report_file: c_0937_47.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00329.pdb # 2: usage_00499.pdb # 3: usage_00500.pdb # 4: usage_00501.pdb # 5: usage_00502.pdb # 6: usage_00519.pdb # 7: usage_00644.pdb # 8: usage_01127.pdb # 9: usage_01128.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 68 ( 20.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 68 ( 64.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00329.pdb 1 PQRVNGKVKGRIFVGSSQVPVVFENTDLHSYVV--------M------------NH---- 36 usage_00499.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------A------------P----- 26 usage_00500.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------A------------P----- 26 usage_00501.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------A------------P-FYTP 30 usage_00502.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------A------------P----- 26 usage_00519.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------APFYDYETKYTPG------ 37 usage_00644.pdb 1 ----REIEVAVLG-N--DYPEA--TWPGEVVKDVAFQLKIP------------------- 32 usage_01127.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------APFYDYETKYTPG------ 37 usage_01128.pdb 1 ----RELEVGVLG-N--VFGEA--SPVGEVRYE--------A------------P----- 26 re evgvlg n ea gev usage_00329.pdb 37 GRSYTAIS 44 usage_00499.pdb 27 -GRAELLI 33 usage_00500.pdb 27 -RAELLI- 32 usage_00501.pdb 31 GRAELLIP 38 usage_00502.pdb 27 -GRAELLI 33 usage_00519.pdb 38 -RAELLIP 44 usage_00644.pdb -------- usage_01127.pdb 38 -RAELLIP 44 usage_01128.pdb 27 -AELLIP- 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################