################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:18 2021 # Report_file: c_0396_43.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00417.pdb # 2: usage_00542.pdb # 3: usage_00545.pdb # 4: usage_00546.pdb # # Length: 115 # Identity: 10/115 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/115 ( 24.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/115 ( 37.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00417.pdb 1 ---------------EVTYFPE-KNR------------SAVCEAMAGKPAAQISWSPD-- 30 usage_00542.pdb 1 GNRESQLNLTVMAKPTNWIEGT-QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLK 59 usage_00545.pdb 1 ---------------LPSLNPGPA----LEEG-QGLTLAASCT-AEGSPAPSVTWDTEVK 39 usage_00546.pdb 1 -FQ-ARLRLRVLVPPLPSLNPGPA----LEEG-QGLTLAASCT-AEGSPAPSVTWDTEVK 52 p A Ct a G Pa v W t usage_00417.pdb 31 GDCVTTSESHSNGTVTVRSTCHWEQ-NN-V-SDVSCIVSHLTG-NQSLSIE---- 77 usage_00542.pdb 60 GEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMD--RFKESLTLNV 112 usage_00545.pdb 40 GTTSSRSFKHS-RSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI--- 90 usage_00546.pdb 53 GTTSSRSFKHS-RSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH- 105 G s hs V S hlvp r q l C Vsh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################