################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:16 2021 # Report_file: c_0435_60.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00109.pdb # 2: usage_00219.pdb # 3: usage_00235.pdb # 4: usage_00571.pdb # 5: usage_00592.pdb # 6: usage_00593.pdb # 7: usage_00649.pdb # 8: usage_00672.pdb # # Length: 114 # Identity: 7/114 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/114 ( 14.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/114 ( 49.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 GEVFKGIDNRTQQVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSSYVTKYYGS 53 usage_00219.pdb 1 GSVFKAIHKESGQVVAIKQVPVES-------DLQEIIKE---ISIMQQCDSPYVVKYYGS 50 usage_00235.pdb 1 GAVYFARDVRNSEVVAIKKMSYSGKQSN--EKWQDIIKE---VRFLQKLRHPNTIQYRGC 55 usage_00571.pdb 1 GDVYKARNVNTGELAAIKVIKLEP----GE-DFAVVQQE---IIMMKDCKHPNIVAYFGS 52 usage_00592.pdb 1 GEVFKGIDNRTQQVVAIKIIDLEE-AED---EIEDIQQE---ITVLSQCDSSYVTKYYGS 53 usage_00593.pdb 1 GEVFKGIDNRTQQVVAIKIIDLEE-AED---EIEDIQQE---ITVLSQCDSSYVTKYYGS 53 usage_00649.pdb 1 -SVFKAIH-K---VVAIKQ------------DLQEIIKE---ISIMQQCDSPYVVKYYGS 40 usage_00672.pdb 1 ----KVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGA 49 k v AiK c y G usage_00109.pdb 54 YLKGSKLWIIMEYLGGGSALDLLRAG---------------------------- 79 usage_00219.pdb 51 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMR- 103 usage_00235.pdb 56 YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 107 usage_00571.pdb 53 YLRRDKLWICMEFCGGGSLQDIYHVT-GPLSELQIAYVSRETLQGLYYLHSKG- 104 usage_00592.pdb 54 YLKGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK- 104 usage_00593.pdb 54 YLKGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK- 104 usage_00649.pdb 41 YFK----WIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMR- 89 usage_00672.pdb 50 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK 102 y wi ME GS d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################