################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:34 2021 # Report_file: c_1062_76.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00082.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00556.pdb # 5: usage_00560.pdb # 6: usage_00612.pdb # 7: usage_00764.pdb # 8: usage_00810.pdb # 9: usage_00811.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 79 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 79 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 TDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIV--CHGIPDYRPLKSGDIINID 58 usage_00139.pdb 1 TDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVI--CHGIPDSTVITDGDIVNID 58 usage_00140.pdb 1 TDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVI--CHGIPDSTVITDGDIVNID 58 usage_00556.pdb 1 TDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVI--CHGIPDSTVITDGDIVNID 58 usage_00560.pdb 1 TDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVI--CHGIPDSTVITDGDIVNID 58 usage_00612.pdb 1 -YQLEGEILHEFTRHGARYP-------AYNTIVGGGENGCILHYTENECELRDGDLVLID 52 usage_00764.pdb 1 TDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVI--CHGIPDSTVITDGDIVNID 58 usage_00810.pdb 1 TDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVI--CHGIPDSRELEEGDILNID 58 usage_00811.pdb 1 TDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVI--CHGIPDSRELEEGDILNID 58 deldr he yps pks cts nE cHgipd GDi nID usage_00082.pdb 59 ISVFYKGVHSDLNETYF-- 75 usage_00139.pdb 59 VTAYIGGVHGDTNATFPAG 77 usage_00140.pdb 59 VTAYIGGVHGDTNATFPAG 77 usage_00556.pdb 59 VTAYIGGVHGDTNATFPAG 77 usage_00560.pdb 59 VTAYIGGVHGDTNATFPAG 77 usage_00612.pdb 53 AGCEYRGYAGDITRTFP-- 69 usage_00764.pdb 59 VTAYIGGVHGDTNATFPAG 77 usage_00810.pdb 59 VSSYLNGFHGDLNETVFIG 77 usage_00811.pdb 59 VSSYLNGFHGDLNETVFIG 77 G hgD n T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################