################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:33 2021 # Report_file: c_0813_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00042.pdb # 2: usage_00043.pdb # 3: usage_00074.pdb # 4: usage_00075.pdb # 5: usage_00077.pdb # 6: usage_00078.pdb # 7: usage_00170.pdb # 8: usage_00171.pdb # 9: usage_00229.pdb # 10: usage_00230.pdb # 11: usage_00237.pdb # 12: usage_00289.pdb # # Length: 89 # Identity: 12/ 89 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 89 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 89 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00043.pdb 1 -RKDAERQLLS--FGNPRGTFLIRESETTKGAYSLSIRDWDDKGDHVKHYKIRKLDNGGY 57 usage_00074.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00075.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00077.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00078.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00170.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00171.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00229.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00230.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 usage_00237.pdb 1 ----SREAADQLLI-VAEGSYLIRESQRQPGTYTLALRFG----SQTRNFRLYYD--GKH 49 usage_00289.pdb 1 PRAKAEEMLSK--Q-RHDGAFLIRESESAPGDFSLSVKFG----NDVQHFKVLRDGAGKY 53 aee l G fLIRESe pG sLs fg v hfk d Gky usage_00042.pdb 54 FLWV-VKFNSLNELVDYHRST-------- 73 usage_00043.pdb 58 YITTRAQFETLQQLVQHYSEK-------- 78 usage_00074.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00075.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00077.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00078.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00170.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00171.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00229.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00230.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 usage_00237.pdb 50 FVGE-KRFESIHDLVTDGLITLYIETKAA 77 usage_00289.pdb 54 FLWV-VKFNSLNELVDYHR---------- 71 f F sl LV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################