################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:22 2021 # Report_file: c_0141_33.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00150.pdb # # Length: 173 # Identity: 47/173 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 132/173 ( 76.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/173 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --VESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVG--FDVKI 56 usage_00009.pdb 1 --VESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVG--FDVKI 56 usage_00030.pdb 1 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKI 58 usage_00031.pdb 1 --VETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKI 56 usage_00150.pdb 1 --DAAARDAVHRAVADGADVIDVGG---------VDVDTEITRLVPFIEWLRGAYPDQLI 49 ve A rVkam deGADiIDVGG t eeElnRvlPvvEaivG fDvkI usage_00008.pdb 57 SVDTFRSEVAEACLKLGVDIINDQWAGLYDHRMFQVVAKYDAEIVLMHNGNGNRDE---- 112 usage_00009.pdb 57 SVDTFRSEVAEACLKLGVDIINDQWAGLYDHRMFQVVAKYDAEIVLMHNGNGNRDE---- 112 usage_00030.pdb 59 SVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDE---- 114 usage_00031.pdb 57 SVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDE---- 112 usage_00150.pdb 50 SVDTWRAQVAKAACAAGADLINDTWGGV-DPAMPEVAAEFGAGLVCAHT-------YGTT 101 SVDTfRseVAeAclklGvD INDqWaGl DhrMfq vAkydAei lmHn usage_00008.pdb 113 --PVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKT--RNEEAEVMAR- 160 usage_00009.pdb 113 --PVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKT--RNEEAEVMAR- 160 usage_00030.pdb 115 --PVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKT--RNEEAEVMAR- 162 usage_00031.pdb 113 --PVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKT--RNEEAEVMAR- 160 usage_00150.pdb 102 TRGVVDAVISQVTAAAERAVAAGVAREKVLIDPA--HDFGKNTFHGLLLLRHV 152 pVVeemltsllAqAhqAkiAGipsnKiwlDPg fakt rneeaevmar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################