################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:59 2021 # Report_file: c_1437_127.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00132.pdb # 2: usage_00546.pdb # 3: usage_00820.pdb # 4: usage_00863.pdb # # Length: 57 # Identity: 3/ 57 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 57 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 57 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 ----HSDNINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLSMQD- 52 usage_00546.pdb 1 QNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGL 57 usage_00820.pdb 1 -QFRHSDNINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLSMQD- 55 usage_00863.pdb 1 -RFHKIANVNKALDYIASKGVKLV-SIGTEEIVDG-NVKMTLGMIWTIILRFAI--- 51 N nkfld i G fe di eg N v i al #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################