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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:46 2021
# Report_file: c_1101_66.html
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#====================================
# Aligned_structures: 5
#   1: usage_00381.pdb
#   2: usage_00382.pdb
#   3: usage_00383.pdb
#   4: usage_00384.pdb
#   5: usage_00385.pdb
#
# Length:        128
# Identity:       90/128 ( 70.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     90/128 ( 70.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           38/128 ( 29.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00381.pdb         1  --------YIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSY   52
usage_00382.pdb         1  ---YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSY   57
usage_00383.pdb         1  -------MYIPSLLIVILSWVSF---MDAAPARVALGITTVLTMTTQSSGSRASLPKVSY   50
usage_00384.pdb         1  ---YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSY   57
usage_00385.pdb         1  MGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSY   60
                                   YIPSLLIVILSWVSF   MDAAPARVALGITTVLTMTTQSSGSRASLPKVSY

usage_00381.pdb        53  VKAIDIWMAVCLLFVFSALLEYAAVNFVSRAGTKVFIDRAKKIDTISRA-----------  101
usage_00382.pdb        58  VKAIDIWMAVCLLFVFSALLEYAAVNFVSRAGTKVFIDRAKKIDTISRACFPLAFLIFNI  117
usage_00383.pdb        51  VKAIDIWMAVCLLFVFSALLEYAAVNFVSRAGTKVFIDRAKKIDTISRACFPLAFLIFNI  110
usage_00384.pdb        58  VKAIDIWMAVCLLFVFSALLEYAAVNFV--------IDRAKKIDTISRACFPLAFLIFNI  109
usage_00385.pdb        61  VKAIDIWMAVCLLFVFSALLEYAAVNFVSRAGTKVFIDRAKKIDTISRACFPLAFLIFNI  120
                           VKAIDIWMAVCLLFVFSALLEYAAVNFV        IDRAKKIDTISRA           

usage_00381.pdb            --------     
usage_00382.pdb       118  FYWVIYK-  124
usage_00383.pdb       111  FYWVIYKI  118
usage_00384.pdb       110  FYWVIY--  115
usage_00385.pdb       121  FYWVIYKI  128
                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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