################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:10 2021 # Report_file: c_0118_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00060.pdb # 2: usage_00120.pdb # 3: usage_00343.pdb # 4: usage_00359.pdb # 5: usage_00482.pdb # 6: usage_00539.pdb # # Length: 121 # Identity: 15/121 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/121 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/121 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSI-STWLAWYQQKPGKAPKLLIYK--ASNLH-T 56 usage_00120.pdb 1 DIQMTQSPSTLSASVGDRVTITCSASS--RVGYMHWYQQKPGKAPKLLIYD--TSKLA-S 55 usage_00343.pdb 1 ---ELTQPPSVSVSPGQTATITCSGDKVA-SKNVCWYQVKPGQSPEVVMYE--NYKRP-S 53 usage_00359.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQGI-SSYLAWYQQKPGKAPKLLIYA--ASSLQ-S 56 usage_00482.pdb 1 --GVTQTPKHLITATGQRVTLRCSPRS--GDLSVYWYQQSLDQGLQFLIQYYNGEERAKG 56 usage_00539.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDV-NTAVAWYQQKPGKAPKLLIYA--ASYLY-S 56 tq P ls s G rvTitC WYQqkpg p liy usage_00060.pdb 57 GVPSRFSGS-GSGTEFSLTISGLQPDDFATYYCQQYNS------Y-SRTFGQGTKVEI-- 106 usage_00120.pdb 56 GVPSRFSGS-GSGTAFTLTISSLQPDDFATYYCFQGSG------Y-PFTFGGGTKVEIKR 107 usage_00343.pdb 54 GIPDRFSGS-KSGSTATLTIRGTQATDEADYYCQVWDS------FSTFVFGSGTQVTV-- 104 usage_00359.pdb 57 GVPSRFSGS-GSGTDFTLTISSLQPEDFAVYYCQQHGN------L-PYTFGDGTKVEI-- 106 usage_00482.pdb 57 NILERFSAQQFPDLHSELNLSSLELGDSALYFCASSV-AVSAGTY-EQYFGPGTRLTVTE 114 usage_00539.pdb 57 GVPSRFSGS-GSGTDFTLTISSLQPEDFATYYCQSSSS------P-YTFGQGT-KVEI-- 105 g p RFSgs sg Ltis lq D A YyC fg g v usage_00060.pdb - usage_00120.pdb 108 T 108 usage_00343.pdb - usage_00359.pdb - usage_00482.pdb - usage_00539.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################