################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:34 2021 # Report_file: c_0677_163.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00398.pdb # 2: usage_00668.pdb # 3: usage_00767.pdb # 4: usage_00848.pdb # 5: usage_00902.pdb # 6: usage_00906.pdb # 7: usage_01016.pdb # 8: usage_01046.pdb # 9: usage_01273.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 63 ( 6.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 63 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00398.pdb 1 DAG-VIQSPRHEVTEMG-QQVTLRCKPIS--GHDYLFWYRQTMMRGLELLI-YF-NN--- 51 usage_00668.pdb 1 --A-VTQSPRNKVTVTG-GNVTLSCRQTN--SHNYMYWYRQDTGHGLRL----------- 43 usage_00767.pdb 1 WLL-LQASA--EVVMEG-QPLFLRCHGWRNWDVYKVIYYKD-----GEALK-YW-Y---- 45 usage_00848.pdb 1 --KPCINPPHVVGNYPATPFLFYIPTSG----ERPIKWHAE----------NL-PKGLKL 43 usage_00902.pdb 1 ----VSQSPSNKVTEKG-KDVELRCDPIS--GHTALYWYRQRLG--LEFLI-YF-QG--- 46 usage_00906.pdb 1 --K-VIQTPRYLVKGQG-QKAKMRCIPEK--GHPVVFWYQQNKNNEFKFLI-NF-QN--- 49 usage_01016.pdb 1 ----VTQTPRYLIKTRG-QQVTLSCSPIS--GHRSVSWYQQTPGQGLQFLF-EY-FN--- 48 usage_01046.pdb 1 --A-VTQSPRNKVAVTG-GKVTLSCNQTN--NHNNMYWYRQDTGHGLRLI---------- 44 usage_01273.pdb 1 --Q-VEQSPSALSLHEG-TGSALRCNFTT--TMRAVQWFQQNSRGSLINLF-YL-ASGTK 52 p g c w usage_00398.pdb --- usage_00668.pdb --- usage_00767.pdb --- usage_00848.pdb --- usage_00902.pdb --- usage_00906.pdb --- usage_01016.pdb --- usage_01046.pdb --- usage_01273.pdb 53 ENG 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################