################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:34 2021 # Report_file: c_0328_17.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00268.pdb # 2: usage_00269.pdb # 3: usage_00270.pdb # 4: usage_00596.pdb # 5: usage_00597.pdb # 6: usage_00648.pdb # 7: usage_00649.pdb # 8: usage_00650.pdb # # Length: 235 # Identity: 208/235 ( 88.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 208/235 ( 88.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/235 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00268.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00269.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00270.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00596.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00597.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00648.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 usage_00649.pdb 1 TREDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 60 usage_00650.pdb 1 -REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI 59 REDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRI usage_00268.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00269.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00270.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00596.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00597.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00648.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 usage_00649.pdb 61 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 120 usage_00650.pdb 60 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF 119 VSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVF usage_00268.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00269.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00270.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00596.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00597.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00648.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 usage_00649.pdb 121 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 180 usage_00650.pdb 120 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY 179 YYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFY usage_00268.pdb 180 YEILASPDRACELARKAFDAAITDLDKLTEES---YKDSTLIMQLLRDNLNLW-- 229 usage_00269.pdb 180 YEILASPDRACELARKAFDAAITDLDKLT-------------------------- 208 usage_00270.pdb 180 YEILASPDRACELARKAFDAAITDLDKLT-------------------------- 208 usage_00596.pdb 180 YEILASPDRACELARKAFDAAITDLDKLT-EESYKDSTLIMQLLRDNLNLW---- 229 usage_00597.pdb 180 YEILASPDRACELARKAFDAAITDLDKLT-EESYKDSTLIMQLLRDNLNLWVTD- 232 usage_00648.pdb 180 YEILASPDRACELARKAFDAAITDLDKLT-------------------------- 208 usage_00649.pdb 181 YEILASPDRACELARKAFDAAITDLDKLT-------------------------- 209 usage_00650.pdb 180 YEILASPDRACELARKAFDAAITDLDKLTEES---YKDSTLIMQLLRDNLNLWVT 231 YEILASPDRACELARKAFDAAITDLDKLT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################