################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:32 2021 # Report_file: c_1332_78.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00087.pdb # 2: usage_00152.pdb # 3: usage_00263.pdb # 4: usage_00264.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00340.pdb # 8: usage_00779.pdb # 9: usage_00798.pdb # 10: usage_00864.pdb # 11: usage_00884.pdb # 12: usage_00966.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 74 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 74 ( 75.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 -----------NFRV-KVMAEA--------------N-HFIDL-S---------Q-IPCN 22 usage_00152.pdb 1 -------------DKLRSQLLA---RQ-GID----LP-VTGIA-H---------S-PDDT 27 usage_00263.pdb 1 -----------HEYQ-AKEILA---RY-GVP----VP-PGKVA-Y---------TP-EEA 28 usage_00264.pdb 1 -----------HEYQ-AKEILA---RY-GVP----VP-PGKVA-Y---------TP-EEA 28 usage_00265.pdb 1 -----------HEYQ-AKEILA---RY-GVP----VP-PGKVA-Y---------TP-EEA 28 usage_00266.pdb 1 -----------HEYQ-AKEILA---RY-GVP----VP-PGKVA-Y---------TP-EEA 28 usage_00340.pdb 1 T------------LA-RVQARGGLA-------------SYIFG-TELDESVAV-AV-ETL 31 usage_00779.pdb 1 -----------DKFR-TKLVWQ---QT-GIP----TP-PFETV-M---------RG-DDY 28 usage_00798.pdb 1 ------------SFF-DLLNER---AK-R--SLLCVG-LDPRA-K--------TAA-AAV 30 usage_00864.pdb 1 -----------DKLR-SMQLLA---RQ-GID----LP-VTGIA-H---------S-PDDT 28 usage_00884.pdb 1 -------------ED-ELKRQI---FGRIAM----IN-E---KKI---------GY---T 23 usage_00966.pdb 1 -FVDEARHQQEIRYK-ILTGMV---RD-F--P-----NQVGIA-Y---------SP-EDF 36 usage_00087.pdb 23 GKAADRIHQD--G- 33 usage_00152.pdb 28 SDLID--------- 32 usage_00263.pdb 29 KRIAEE---F---- 35 usage_00264.pdb 29 KRIAEE---F---- 35 usage_00265.pdb 29 KRIAEE---F---- 35 usage_00266.pdb 29 KRIAEE---F---- 35 usage_00340.pdb 32 ARVALN---F---- 38 usage_00779.pdb 29 AARAQDIVAK---- 38 usage_00798.pdb 31 EECKRLIEQT---- 40 usage_00864.pdb 29 SDLIDM-------- 34 usage_00884.pdb 24 KEIWDD---IAIKL 34 usage_00966.pdb 37 RRLAMEG------- 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################