################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:23 2021 # Report_file: c_1428_52.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00150.pdb # 2: usage_00507.pdb # 3: usage_00508.pdb # 4: usage_00509.pdb # 5: usage_00538.pdb # 6: usage_00672.pdb # 7: usage_01027.pdb # 8: usage_01369.pdb # 9: usage_01901.pdb # # Length: 56 # Identity: 4/ 56 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 56 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 56 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00150.pdb 1 --GTKIAEKIDEFLATGKLRKLEKIRQ-DDTSSSINFLTRVTGIGPSAARKLVDEG 53 usage_00507.pdb 1 -----KIR------------------Q-DDTSSSINFLTRVTGIGPSAARKLVDE- 31 usage_00508.pdb 1 LRKLEKIR------------------QDDTSSS-INFLTRVTGIGPSAARKLVDEG 37 usage_00509.pdb 1 --RKLEKI------------------RQDDTSSSINFLTRVTGIGPSAARKLVDEG 36 usage_00538.pdb 1 -LRKLEKI------------------RQDDTSSSINFLTRVTGIGPSAARKLVDEG 37 usage_00672.pdb 1 --EEVERV------------------RRSERYQTMKLFTQIFGVGVKTADRWYREG 36 usage_01027.pdb 1 -SSEAKAV------------------LNDERYKSFKLFTSVFGVGLKTAEKWFRMG 37 usage_01369.pdb 1 --RKLEKI------------------RQDDTSSSINLLTRVSGIGPSAARKFVDEG 36 usage_01901.pdb 1 ---KLEKI------------------RQDDTSSSINFLTRVSGIGPSAARKFVDEG 35 d T v G G A k e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################