################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:56 2021 # Report_file: c_1214_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00087.pdb # 2: usage_00172.pdb # 3: usage_00208.pdb # 4: usage_00308.pdb # 5: usage_00309.pdb # 6: usage_00310.pdb # 7: usage_00578.pdb # 8: usage_00629.pdb # 9: usage_00681.pdb # # Length: 73 # Identity: 15/ 73 ( 20.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 73 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 73 ( 35.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 -SHAVTKLE-LIGRHAEKQEISVGSINLVDLAGSESP------------------INRSL 40 usage_00172.pdb 1 -SHLIVSVI-IESTNLQTQAIARGKLSFVDLAGSERV------------KKEAQSINKSL 46 usage_00208.pdb 1 -SHALLIVT-VRGVDCSTGLRTTGKLNLVDLAGSERVGSRLREAQH---------INKSL 49 usage_00308.pdb 1 RSHSVFLIN-VKQENLENQKKLSGKLYLVDLAGSEKV-----------K-----NINKSL 43 usage_00309.pdb 1 -SHSVFLIN-VKQENLENQKKLSGKLYLVDLAGSEKK-----------------NINKSL 41 usage_00310.pdb 1 -SHSVFLIN-VKQENLENQKKLSGKLYLVDLAGSEKV------------------INKSL 40 usage_00578.pdb 1 -SHSIFIIH-LEGKNEGTGEKSQGILNLVDLAGSER----LRETQS---------INKSL 45 usage_00629.pdb 1 -SHSIFLIN-IKQENVETEKKLSGKLYLVDLAGSEK---------------------KSL 37 usage_00681.pdb 1 -SHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSED----------GA-------INTSL 42 SH G l lvDLAGSE SL usage_00087.pdb 41 SELTNVILALLQK 53 usage_00172.pdb 47 SALGDVISALSSG 59 usage_00208.pdb 50 SALGDVIAALRSR 62 usage_00308.pdb 44 SALGNVISALAD- 55 usage_00309.pdb 42 SALGNVISALA-- 52 usage_00310.pdb 41 SALGNVISALADG 53 usage_00578.pdb 46 SCLGDVIHAL--- 55 usage_00629.pdb 38 SALGNVISALA-- 48 usage_00681.pdb 43 FVLGKVVDALNQG 55 s Lg Vi AL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################