################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:53 2021 # Report_file: c_1197_149.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00424.pdb # 2: usage_00461.pdb # 3: usage_00614.pdb # 4: usage_01188.pdb # 5: usage_01246.pdb # 6: usage_01354.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 34 ( 8.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 34 ( 64.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00424.pdb 1 YSWRTEK-E------PL-------SDPVGTCYLS 20 usage_00461.pdb 1 RYGCQYYS-R--ARWSE------LSDPLVLVMTG 25 usage_00614.pdb 1 -YRCYYG--SD-AGRSE------SSDPLELVVTG 24 usage_01188.pdb 1 ---LMCHY-R--HRAHGDPFVYPGLQDITA---- 24 usage_01246.pdb 1 RYGCQYYS-R--ARWSE------LSDPLVL---- 21 usage_01354.pdb 1 RYRCYYG--SDTAGRSE------SSDPLELVVTG 26 sdp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################