################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:09 2021 # Report_file: c_1344_41.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00209.pdb # 2: usage_00210.pdb # 3: usage_00211.pdb # 4: usage_00212.pdb # 5: usage_00213.pdb # 6: usage_00214.pdb # 7: usage_00215.pdb # 8: usage_00346.pdb # 9: usage_00386.pdb # 10: usage_00387.pdb # # Length: 36 # Identity: 5/ 36 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 36 ( 52.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 36 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00209.pdb 1 -LPILWSLFP------HHRYLLDTDFTVNDELVKT- 28 usage_00210.pdb 1 ILPILWSLFP------HHRYLLDTDFTVNDELVKT- 29 usage_00211.pdb 1 -LPILWSLFP------HHRYLLDTDFTVNDELVKT- 28 usage_00212.pdb 1 -LPILWSLFP------HHRYLLDTDFTVNDELVKT- 28 usage_00213.pdb 1 -LPILWSLFP------HHRYLLDTDFTVNDELVKTG 29 usage_00214.pdb 1 ILPILWSLFP------HHRYLLDTDFTVNDELVKTG 30 usage_00215.pdb 1 -LPILWSLFP------HHRYLLDTDFTVNDELVKT- 28 usage_00346.pdb 1 -TPVLWKYLYRYAKKGVYPN--------NPQSVT-- 25 usage_00386.pdb 1 ILPILWSLFP------HHRYLLDTDFTVNDELVKTG 30 usage_00387.pdb 1 ILPILWSLFP------HHRYLLDTDFTVNDELVKTG 30 lPiLWslfp hhry NdelVk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################