################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:59 2021 # Report_file: c_0904_23.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00112.pdb # 2: usage_00113.pdb # 3: usage_00116.pdb # 4: usage_00249.pdb # 5: usage_00322.pdb # 6: usage_00357.pdb # 7: usage_00473.pdb # 8: usage_00474.pdb # 9: usage_00476.pdb # 10: usage_00563.pdb # 11: usage_00564.pdb # 12: usage_00588.pdb # # Length: 59 # Identity: 14/ 59 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 59 ( 23.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 59 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 ----IFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 52 usage_00113.pdb 1 LFDDIFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 56 usage_00116.pdb 1 ----IFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 52 usage_00249.pdb 1 ----IFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLT---- 48 usage_00322.pdb 1 ----IFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 52 usage_00357.pdb 1 LFDDIFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 56 usage_00473.pdb 1 LFDDIFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTI- 55 usage_00474.pdb 1 LFDDIFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTI- 55 usage_00476.pdb 1 LFDDIFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTI- 55 usage_00563.pdb 1 LFEDIFDVKDID-PEGKKFDRVSRLHCESES-FKMDLILDVNIQIYPVDLGDKFRLVIA 57 usage_00564.pdb 1 LFEDIFDVKDID-PEGKKFDRVSRLHCESES-FKMDLILDVNIQIYPVDLGDKFRLVIA 57 usage_00588.pdb 1 ----IFQVSEVDPG---RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA 52 IF V D V R S L LD N PV D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################