################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:24:46 2021 # Report_file: c_0886_17.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00004.pdb # 2: usage_00023.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00052.pdb # 6: usage_00060.pdb # 7: usage_00061.pdb # 8: usage_00080.pdb # 9: usage_00181.pdb # 10: usage_00182.pdb # 11: usage_00211.pdb # 12: usage_00212.pdb # 13: usage_00221.pdb # 14: usage_00225.pdb # 15: usage_00265.pdb # 16: usage_00331.pdb # 17: usage_00345.pdb # 18: usage_00351.pdb # 19: usage_00354.pdb # 20: usage_00356.pdb # 21: usage_00360.pdb # 22: usage_00419.pdb # 23: usage_00640.pdb # 24: usage_00641.pdb # 25: usage_00684.pdb # 26: usage_00709.pdb # # Length: 133 # Identity: 57/133 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 98/133 ( 73.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/133 ( 24.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00023.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00045.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00046.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00052.pdb 1 -YDLCQGMRQISQEFVRLQVTYEEFLCMKVLLLLSTVPKDGLKSQASFDEMRMNYIKELR 59 usage_00060.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00061.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00080.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00181.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00182.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00211.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00212.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00221.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00225.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00265.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00331.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00345.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00351.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00354.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00356.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00360.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00419.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00640.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00641.pdb 1 MYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 60 usage_00684.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 usage_00709.pdb 1 -YSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELD 59 YsqCvrMRhlSQEFgwLQiTpqEFLCMKaLLLfSiiPvDGLKnQkfFDElRMNYIKELd usage_00004.pdb 61 RII--------A-TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 103 usage_00023.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFAFDLLIKSHMVSVDFPEMMA 116 usage_00045.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00046.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 usage_00052.pdb 60 RAIE---N-NS--SQNWQRFYQLTKLLDSMHDLVGGLLQFCFYTFVQSQALSVEFPEMLV 113 usage_00060.pdb 61 RII-----------SCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMA 109 usage_00061.pdb 61 RII-A--RKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 107 usage_00080.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00181.pdb 60 RII--------ACTSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 103 usage_00182.pdb 61 RII--------ACTSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 104 usage_00211.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 usage_00212.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00221.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 usage_00225.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMA 116 usage_00265.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 usage_00331.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMA 117 usage_00345.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 usage_00351.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00354.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFAFDLLIKSHMVS-------- 108 usage_00356.pdb 60 RII-----------ACSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 100 usage_00360.pdb 60 RII--------A-TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMA 110 usage_00419.pdb 60 RIIAC--KKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 107 usage_00640.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00641.pdb 61 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 109 usage_00684.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMA 116 usage_00709.pdb 60 RII-ACKRKNP--TSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVS-------- 108 RiI csrRFYQLTKLLDSvqpiareLhQF FdllikShmvS usage_00004.pdb ------------- usage_00023.pdb 117 EIISVQ------- 122 usage_00045.pdb ------------- usage_00046.pdb ------------- usage_00052.pdb 114 EIISDQLPKVMAG 126 usage_00060.pdb 110 EIISVQ------- 115 usage_00061.pdb ------------- usage_00080.pdb ------------- usage_00181.pdb ------------- usage_00182.pdb ------------- usage_00211.pdb ------------- usage_00212.pdb ------------- usage_00221.pdb ------------- usage_00225.pdb 117 EIISVQ------- 122 usage_00265.pdb ------------- usage_00331.pdb 118 EIISVQ------- 123 usage_00345.pdb ------------- usage_00351.pdb ------------- usage_00354.pdb ------------- usage_00356.pdb ------------- usage_00360.pdb 111 EIISVQVPKILSG 123 usage_00419.pdb ------------- usage_00640.pdb ------------- usage_00641.pdb ------------- usage_00684.pdb 117 EIISVQ------- 122 usage_00709.pdb ------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################