################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:56 2021 # Report_file: c_0984_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00317.pdb # 2: usage_00318.pdb # 3: usage_00319.pdb # 4: usage_00320.pdb # 5: usage_00464.pdb # 6: usage_00465.pdb # 7: usage_00466.pdb # 8: usage_00467.pdb # 9: usage_00468.pdb # # Length: 80 # Identity: 47/ 80 ( 58.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 80 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 80 ( 38.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00317.pdb 1 TLSIEPV--GLA---------SAVECGGPKKCALTGQSKSCKHRIKLG-D-NYYYISPFC 47 usage_00318.pdb 1 -LSIEPV--G-------------VECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 44 usage_00319.pdb 1 TLSIEPV--GL-QPIRFV----KAECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 53 usage_00320.pdb 1 TLSIEPV--G---------------------L--TGQSKSCKHRIKLGDSSNYYYISPFC 35 usage_00464.pdb 1 TLSIEPV--GLA---------SAVECGGPKKCALTGQSKSCKHRIKLG-D-NYYYISPFC 47 usage_00465.pdb 1 TLSIEPVSA--------------VECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 46 usage_00466.pdb 1 -LSIEPV--G-------------VECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 44 usage_00467.pdb 1 TLSIEPV--G--------VKASAVECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 50 usage_00468.pdb 1 --SIEPV--GL-----QP-----VECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFC 46 SIEPV c TGQSKSCKHRIKLG NYYYISPFC usage_00317.pdb 48 RYRITSVCNFFTYIRYIQQG 67 usage_00318.pdb 45 RYRITSVCNFFTYIRYIQQG 64 usage_00319.pdb 54 RYRITSVCNFFTYIRYIQQ- 72 usage_00320.pdb 36 RYRITSVCNFFTYIRYIQQG 55 usage_00464.pdb 48 RYRITSVCNFFTYIRYIQQG 67 usage_00465.pdb 47 RYRITSVCNFFTYIRYIQQG 66 usage_00466.pdb 45 RYRITSVCNFFTYIRYIQQG 64 usage_00467.pdb 51 RYRITSVCNFFTYIRYIQQG 70 usage_00468.pdb 47 RYRITSVCNFFTYIRYIQQG 66 RYRITSVCNFFTYIRYIQQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################