################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:36:54 2021 # Report_file: c_0791_85.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00401.pdb # 2: usage_00402.pdb # 3: usage_00409.pdb # 4: usage_00410.pdb # 5: usage_00429.pdb # 6: usage_00430.pdb # 7: usage_00435.pdb # 8: usage_00503.pdb # 9: usage_00519.pdb # 10: usage_00520.pdb # 11: usage_00521.pdb # 12: usage_00522.pdb # 13: usage_00523.pdb # 14: usage_00524.pdb # 15: usage_00751.pdb # 16: usage_00831.pdb # 17: usage_00915.pdb # 18: usage_00916.pdb # 19: usage_00917.pdb # 20: usage_00964.pdb # 21: usage_00965.pdb # 22: usage_01003.pdb # 23: usage_01176.pdb # 24: usage_01179.pdb # 25: usage_01234.pdb # 26: usage_01235.pdb # 27: usage_01282.pdb # # Length: 73 # Identity: 56/ 73 ( 76.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 73 ( 76.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 73 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00401.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 usage_00402.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP---------------PDDDLAQ 45 usage_00409.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 usage_00410.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF-------AYPRTPDDDLAQ 53 usage_00429.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ----------PRTPDDDLAQ 50 usage_00430.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 usage_00435.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 usage_00503.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP---------------PDDDLAQ 45 usage_00519.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 usage_00520.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP---------------PDDDLAQ 45 usage_00521.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP--------------TPDDDLAQ 46 usage_00522.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFV----------------TPDDDLAQ 44 usage_00523.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP---------------PDDDLAQ 45 usage_00524.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP--------------TPDDDLAQ 46 usage_00751.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF---------PRTPDDDLAQ 51 usage_00831.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF----------RTPDDDLAQ 50 usage_00915.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ----------PRTPDDDLAQ 50 usage_00916.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ--------AYPRTPDDDLAQ 52 usage_00917.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFG------AYPRTPDDDLAQ 54 usage_00964.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF---------PRTPDDDLAQ 51 usage_00965.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGA------YPRTPDDDLAQ 54 usage_01003.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP--------------TPDDDLAQ 46 usage_01176.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP---------------PDDDLAQ 45 usage_01179.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ----------PRTPDDDLAQ 50 usage_01234.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQ 60 usage_01235.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGA---LDAYPRTPDDDLAQ 57 usage_01282.pdb 1 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQ 48 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFV PDDDLAQ usage_00401.pdb 49 LRAEGVEIAFTPT 61 usage_00402.pdb 46 LRAEGVEIAFTPT 58 usage_00409.pdb 49 LRAEGVEIAFTPT 61 usage_00410.pdb 54 LRAEGVEIAFTPT 66 usage_00429.pdb 51 LRAEGVEIAFTPT 63 usage_00430.pdb 49 LRAEGVEIAFTPT 61 usage_00435.pdb 49 LRAEGVEIAFTPT 61 usage_00503.pdb 46 LRAEGVEIAFTPT 58 usage_00519.pdb 49 LRAEGVEIAFTPT 61 usage_00520.pdb 46 LRAEGVEIAFTPT 58 usage_00521.pdb 47 LRAEGVEIAFTPT 59 usage_00522.pdb 45 LRAEGVEIAFTPT 57 usage_00523.pdb 46 LRAEGVEIAFTPT 58 usage_00524.pdb 47 LRAEGVEIAFTPT 59 usage_00751.pdb 52 LRAEGVEIAFTPT 64 usage_00831.pdb 51 LRAEGVEIAFTPT 63 usage_00915.pdb 51 LRAEGVEIAFTPT 63 usage_00916.pdb 53 LRAEGVEIAFTPT 65 usage_00917.pdb 55 LRAEGVEIAFTPT 67 usage_00964.pdb 52 LRAEGVEIAFTPT 64 usage_00965.pdb 55 LRAEGVEIAFTPT 67 usage_01003.pdb 47 LRAEGVEIAFTPT 59 usage_01176.pdb 46 LRAEGVEIAFTPT 58 usage_01179.pdb 51 LRAEGVEIAFTPT 63 usage_01234.pdb 61 LRAEGVEIAFTPT 73 usage_01235.pdb 58 LRAEGVEIAFTPT 70 usage_01282.pdb 49 LRAEGVEIAFTPT 61 LRAEGVEIAFTPT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################