################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:54 2021 # Report_file: c_1445_538.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_02965.pdb # 2: usage_05321.pdb # 3: usage_05322.pdb # 4: usage_08487.pdb # 5: usage_08488.pdb # 6: usage_10308.pdb # 7: usage_10309.pdb # 8: usage_10470.pdb # 9: usage_10471.pdb # 10: usage_10797.pdb # 11: usage_10798.pdb # 12: usage_10821.pdb # 13: usage_10822.pdb # 14: usage_10966.pdb # 15: usage_10967.pdb # 16: usage_11366.pdb # 17: usage_12832.pdb # 18: usage_15614.pdb # 19: usage_16078.pdb # 20: usage_16079.pdb # # Length: 26 # Identity: 1/ 26 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 26 ( 19.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 26 ( 73.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02965.pdb 1 ---SDIRGMGLLIGAE---------- 13 usage_05321.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_05322.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_08487.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_08488.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10308.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10309.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10470.pdb 1 ---SEIRGEGL--------TSDSVSL 15 usage_10471.pdb 1 ---SEIRGEGL--------TSDSVSL 15 usage_10797.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10798.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10821.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10822.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10966.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_10967.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_11366.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_12832.pdb 1 IDV-KGRDLMQGVPREV--------- 16 usage_15614.pdb 1 ---SDIRGMGLLIGAE---------- 13 usage_16078.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 usage_16079.pdb 1 ---KEIRGRGLLNAVE-VD------- 15 iRg gl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################