################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:50 2021 # Report_file: c_1372_62.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00122.pdb # 2: usage_00220.pdb # 3: usage_00221.pdb # 4: usage_00338.pdb # 5: usage_00339.pdb # 6: usage_00340.pdb # 7: usage_00412.pdb # 8: usage_00413.pdb # 9: usage_00414.pdb # 10: usage_00415.pdb # 11: usage_00417.pdb # 12: usage_00418.pdb # 13: usage_00419.pdb # 14: usage_00420.pdb # 15: usage_01317.pdb # 16: usage_01318.pdb # 17: usage_01319.pdb # # Length: 67 # Identity: 34/ 67 ( 50.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 67 ( 67.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 67 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 -EKDFQKVAHFIHRGIELTLQIQSDTGVAATLKEFKERLAGDKYQAAVQALREEVESFAS 59 usage_00220.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_00221.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_00338.pdb 1 -EEDFQKVAHFIHRGIELTLQIQSH-ATKATLKEFKEKLAGD---EKIQSAVATLREEVE 55 usage_00339.pdb 1 LEEDFQKVAHFIHRGIELTLQIQSH-ATKATLKEFKEKLAGD---EKIQSAVATLREEVE 56 usage_00340.pdb 1 LEEDFQKVAHFIHRGIELTLQIQSH-ATKATLKEFKEKLAGD---EKIQSAVATLREEVE 56 usage_00412.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_00413.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 usage_00414.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_00415.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_00417.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 usage_00418.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 usage_00419.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 usage_00420.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 usage_01317.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_01318.pdb 1 LEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 57 usage_01319.pdb 1 -EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGD---EKHQRAVRALRQEVE 56 E DFQKVAHFIHRGIELT QIQ ATLKEFKEkLAGD ek Q av lr eve usage_00122.pdb 60 LFP---- 62 usage_00220.pdb 58 SFAALF- 63 usage_00221.pdb 58 SFAAL-- 62 usage_00338.pdb 56 NFASNF- 61 usage_00339.pdb 57 NFASNF- 62 usage_00340.pdb 57 NFASNF- 62 usage_00412.pdb 58 SFAA--- 61 usage_00413.pdb 57 SFA---- 59 usage_00414.pdb 58 SFAAL-- 62 usage_00415.pdb 58 SFAAL-- 62 usage_00417.pdb 57 SFAAL-- 61 usage_00418.pdb 57 SFAALFP 63 usage_00419.pdb 57 SFAAL-- 61 usage_00420.pdb 57 SFAALFP 63 usage_01317.pdb 58 SFAAL-- 62 usage_01318.pdb 58 SFAA--- 61 usage_01319.pdb 57 SFAAL-- 61 Fa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################