################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:27 2021 # Report_file: c_0704_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00028.pdb # 2: usage_00035.pdb # 3: usage_00054.pdb # 4: usage_00056.pdb # 5: usage_00064.pdb # 6: usage_00088.pdb # 7: usage_00089.pdb # 8: usage_00090.pdb # 9: usage_00091.pdb # # Length: 34 # Identity: 7/ 34 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 34 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 34 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ---IVVAMYDFQATEAHDLRLERGQEYIILEKND 31 usage_00035.pdb 1 -RIIVVALYDYEAIHHEDLSFQKGDQMVVLEES- 32 usage_00054.pdb 1 --NLVIALHSYEPSHDGDLGFEKGEQLRILEQSG 32 usage_00056.pdb 1 -DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSG 33 usage_00064.pdb 1 --IIVVALYDYYSPFSWDLSFQKGDQMVVLEESG 32 usage_00088.pdb 1 -DIIVVALYDYEAIHHEDLSFQKGDQMVVLEESG 33 usage_00089.pdb 1 -DIIVVALYDYYSPFSWDLSFQKGDQMVVLEESG 33 usage_00090.pdb 1 -DIIVVALYDYYSPFSWDLSFQKGDQMVVLEESG 33 usage_00091.pdb 1 EDIIVVALYDYVSWSPDDLSFQKGDQMVVLEESG 34 V Al y DL f kG q LE s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################