################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:38 2021 # Report_file: c_0970_133.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00880.pdb # 2: usage_00881.pdb # 3: usage_00882.pdb # 4: usage_00883.pdb # 5: usage_01116.pdb # # Length: 56 # Identity: 2/ 56 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 56 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 56 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00880.pdb 1 ------TG----STNGFGGYVAFIAQQLG-IVILANN--YPNEERVKLAYRILQHA 43 usage_00881.pdb 1 TAWVNKTG----STNGFGGYVAFIAQQLG-IVILANN--YPNEERVLAYRILQHA- 48 usage_00882.pdb 1 ------TG----STNGFGGYVAFIAQQLG-IVILANN--YPNEERVKLAYRILQHA 43 usage_00883.pdb 1 TAWVNKTG----STNGFGGYVAFIAQQLG-IVILANN--YPNEERVKLAYRILQHA 49 usage_01116.pdb 1 --------DVWMLRGKYVAFV-LMG--ESFLRSP---AFTVPESAQRWANQIRQEG 42 stngfggyV fia lg ivil ypnEerv a i q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################