################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:36 2021 # Report_file: c_1221_304.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00088.pdb # 6: usage_00181.pdb # 7: usage_00228.pdb # 8: usage_00333.pdb # 9: usage_00334.pdb # 10: usage_00335.pdb # 11: usage_00494.pdb # 12: usage_00587.pdb # 13: usage_00930.pdb # 14: usage_01411.pdb # 15: usage_01500.pdb # 16: usage_01545.pdb # 17: usage_01644.pdb # 18: usage_01645.pdb # 19: usage_01901.pdb # 20: usage_01947.pdb # 21: usage_01976.pdb # 22: usage_01977.pdb # 23: usage_01978.pdb # 24: usage_02485.pdb # 25: usage_02512.pdb # 26: usage_02513.pdb # # Length: 28 # Identity: 22/ 28 ( 78.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 28 ( 89.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 28 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00004.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00005.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAIG 27 usage_00006.pdb 1 YYEIGIGHLLTKSPSLNAAKSELDKA-- 26 usage_00088.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00181.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_00228.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_00333.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00334.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00335.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_00494.pdb 1 -YTIGIGHLLTKSPDLNAAKSELDKAI- 26 usage_00587.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_00930.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAIG 27 usage_01411.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_01500.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_01545.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAIG 27 usage_01644.pdb 1 -YTIGIGHLLTKSPSLNAAKWELDKAIG 27 usage_01645.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_01901.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_01947.pdb 1 YYTIGIGHLLTKSPSLNAAKSELDKA-- 26 usage_01976.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_01977.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAIG 27 usage_01978.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_02485.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 usage_02512.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKAI- 26 usage_02513.pdb 1 -YTIGIGHLLTKSPSLNAAKSELDKA-- 25 YtIGIGHLLTKSPsLNAAKsELDKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################