################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:06 2021 # Report_file: c_1405_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00212.pdb # 2: usage_00225.pdb # 3: usage_00226.pdb # 4: usage_00227.pdb # 5: usage_00228.pdb # 6: usage_01530.pdb # 7: usage_01531.pdb # 8: usage_01707.pdb # 9: usage_01708.pdb # # Length: 48 # Identity: 2/ 48 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 48 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 48 ( 39.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00212.pdb 1 FD-ET-----KKVLAFVAEDRARQSKK----PIQDELDAITEKLAKLE 38 usage_00225.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRREFG 42 usage_00226.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRREFG 42 usage_00227.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRRE-- 40 usage_00228.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRRE-- 40 usage_01530.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRREFG 42 usage_01531.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITMTLAWRRE-- 40 usage_01707.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITTLAWR-RE-- 39 usage_01708.pdb 1 --EEEEKAWLTRECFLRYLRATK----WVLKDCIDRITTLAWR-RE-- 39 Ee trecflrylratk dciDrit re #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################