################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:35 2021 # Report_file: c_1358_91.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00075.pdb # 2: usage_00299.pdb # 3: usage_00300.pdb # 4: usage_00301.pdb # 5: usage_00302.pdb # 6: usage_00448.pdb # 7: usage_00449.pdb # 8: usage_00450.pdb # 9: usage_00451.pdb # 10: usage_00459.pdb # 11: usage_00466.pdb # 12: usage_00680.pdb # # Length: 47 # Identity: 2/ 47 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 47 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 47 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 --GRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKG-- 43 usage_00299.pdb 1 --TELINAVAETSG-L--SKKDATKAVDAVFDSITEALRKGDKVQL- 41 usage_00300.pdb 1 --TELINAVAETSG-L--SKKDATKAVDAVFDSITEALRKGDKVQLI 42 usage_00301.pdb 1 -KTELINAVAETSG-L--SKKDATKAVDAVFDSITEALRKGDKVQL- 42 usage_00302.pdb 1 -KTELINAVAETSG-L--SKKDATKAVDAVFDSITEALRKGDKVQL- 42 usage_00448.pdb 1 -KTDLINAVAEQAD-L--TKKEAGSAVDAVFESIQNSLAKGEKVQL- 42 usage_00449.pdb 1 -KTDLINAVAEQAD-L--TKKEAGSAVDAVFESIQNSLAKGEKVQL- 42 usage_00450.pdb 1 -KTDLINAVAEQAD-L--TKKEAGSAVDAVFESIQNSLAKGEKVQL- 42 usage_00451.pdb 1 -KTDLINAVAEQAD-L--TKKEAGSAVDAVFESIQNSLAKGEKVQLI 43 usage_00459.pdb 1 TKADLVDQVAQATG-L--KKKDVKAMVDALLAKVEEALANGSKVQL- 43 usage_00466.pdb 1 -KQDLIAKVAEATE-L--TKKDSAAAVDAVFSAVSSYLAKGEKVQL- 42 usage_00680.pdb 1 -KTDLINAVAEQAD-L--TKKEAGSAVDAVFESIQNSLAKGEKVQL- 42 l va l kk Vda l G kvq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################