################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:21 2021 # Report_file: c_0013_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00055.pdb # 5: usage_00056.pdb # 6: usage_00083.pdb # 7: usage_00084.pdb # 8: usage_00085.pdb # 9: usage_00138.pdb # 10: usage_00146.pdb # # Length: 292 # Identity: 121/292 ( 41.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 220/292 ( 75.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/292 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY 60 usage_00012.pdb 1 RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY 60 usage_00013.pdb 1 RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY 60 usage_00055.pdb 1 RVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTY 60 usage_00056.pdb 1 RVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTY 60 usage_00083.pdb 1 RVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSY 60 usage_00084.pdb 1 RVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSY 60 usage_00085.pdb 1 RVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSY 60 usage_00138.pdb 1 -LVAVQTLSGTGALSLGAKLLTHVFD-A--EKTPIYLADPTWPNHYSIVKAAGWKDIRTY 56 usage_00146.pdb 1 RVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSY 60 vg VQ LgGTGALriGA fL rwyn TPvYvssPTWeNHn vf AGfKDIR Y usage_00011.pdb 61 RYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLF 120 usage_00012.pdb 61 RYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLF 120 usage_00013.pdb 61 RYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLF 120 usage_00055.pdb 61 RYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLF 120 usage_00056.pdb 61 RYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLF 120 usage_00083.pdb 61 RYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLF 120 usage_00084.pdb 61 RYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLF 120 usage_00085.pdb 61 RYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLF 120 usage_00138.pdb 57 AYYDHKTLGLDFEGMKKDILAAPDGSVFLLHQCAHNPTGVDPSQEQWNEIASLMLAKHHQ 116 usage_00146.pdb 61 RYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLF 120 rYwD krGLDlqG l D e APefSi LHaCAHNPTG DPtp WkqIA vMk r lf usage_00011.pdb 121 PFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFS-NFGLYNERVGNLTVVAKEPD 179 usage_00012.pdb 121 PFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFS-NFGLYNERVGNLTVVAKEPD 179 usage_00013.pdb 121 PFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFS-NFGLYNERVGNLTVVAKEPD 179 usage_00055.pdb 121 PFFDSAYQGFASGSLDKDAWAVRYFVSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDED 180 usage_00056.pdb 121 PFFDSAYQGFASGSLDKDAWAVRYFVSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDED 180 usage_00083.pdb 121 PFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPE 180 usage_00084.pdb 121 PFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPE 180 usage_00085.pdb 121 PFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPE 180 usage_00138.pdb 117 VFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKT 176 usage_00146.pdb 121 PFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPE 180 pFFDSAYQGfASG L DAwA RyFvseGfE fcAQSFS NfGLYnERvGnL vv K usage_00011.pdb 180 SILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELR 239 usage_00012.pdb 180 SILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELR 239 usage_00013.pdb 180 SILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELR 239 usage_00055.pdb 181 NVQRVLSQMEKIVRTTWSNPPSQGARIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELR 240 usage_00056.pdb 181 NVQRVLSQMEKIVRTTWSNPPSQGARIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELR 240 usage_00083.pdb 181 SILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELR 240 usage_00084.pdb 181 SILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELR 240 usage_00085.pdb 181 SILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELR 240 usage_00138.pdb 177 KRADVKSVMDSLIRAEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVY 236 usage_00146.pdb 181 SILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELR 240 VlSqM kivR twsnPP qGARiva tL p Lf EW nvktMAdR l MRselr usage_00011.pdb 240 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL-------- 283 usage_00012.pdb 240 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL-------- 283 usage_00013.pdb 240 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL-------- 283 usage_00055.pdb 241 SRLESLGTPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLM-------- 284 usage_00056.pdb 241 SRLESLGTPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLM-------- 284 usage_00083.pdb 241 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVS 292 usage_00084.pdb 241 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLL-------- 284 usage_00085.pdb 241 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVS 292 usage_00138.pdb 237 DELLRLQTPGRWEHVINQIGMFSFLGLSKEQCEYCQNHNIFITLSGRANIA- 287 usage_00146.pdb 241 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRIN-- 290 rLe L TPGtWnHitdQIGMFSFtGLnpkQvEY khiyl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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