################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:04 2021 # Report_file: c_1041_36.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00127.pdb # 4: usage_00141.pdb # 5: usage_00180.pdb # 6: usage_00211.pdb # 7: usage_00292.pdb # 8: usage_00346.pdb # 9: usage_00368.pdb # 10: usage_00432.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 67 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 67 ( 49.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 SIRVNAVSPGAIDTP-AKFAAATP----LGRVGRPEELAAAVLFLASDDSSY-VA----G 50 usage_00040.pdb 1 SIRVNAVSPGAIDTP-AKFAAATP----LGRVGRPEELAAAVLFLASDDSSY-VA----G 50 usage_00127.pdb 1 GITINAVAPGFIET-REVGRRLNS----LLQGGQPVDVAEAIAYFASPASNA-VT----G 50 usage_00141.pdb 1 GIRVNGVAPGPI-------GSNVP----MQRPGQPYELAPAYVYLASSDSSY-VT----G 44 usage_00180.pdb 1 --TANVVAPGYIDT---A-LQFIP----AKRVGTPAEVAGVVSFLASEDASY-IS----G 45 usage_00211.pdb 1 GIKVNAVSAGPI----DYNAMVSP----LKKNVDIMEVGNTVAFLCSDMATG-IT----G 47 usage_00292.pdb 1 QISVNAIAPGPMDT-----SFFYGQEMGN-QLTKIEDIAPIIKFLTT-DGWW-IN----G 48 usage_00346.pdb 1 GITINAVAPGFIE-------------------GQPVDVAEAIAYFASPASNA-VT----G 36 usage_00368.pdb 1 GVTVNAVAPGFIA----PILQFIP----LARYGQPEEVAGTIRFLATDPAAAYIT----G 48 usage_00432.pdb 1 ---DIAVNKADD-------------------GDGERRASAAASEYRAALHIL--TPPSAT 36 n v g g usage_00039.pdb 51 IELFVD- 56 usage_00040.pdb 51 IELFVD- 56 usage_00127.pdb 51 NVIRVC- 56 usage_00141.pdb 45 QMIHV-- 49 usage_00180.pdb 46 AVIPVD- 51 usage_00211.pdb 48 EVVHVD- 53 usage_00292.pdb 49 QTIFAN- 54 usage_00346.pdb 37 NVIR--- 40 usage_00368.pdb 49 QTFNVD- 54 usage_00432.pdb 37 WTPPVVT 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################