################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:36:49 2021 # Report_file: c_0157_12.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00031.pdb # 6: usage_00084.pdb # 7: usage_00107.pdb # 8: usage_00214.pdb # 9: usage_00217.pdb # 10: usage_00225.pdb # 11: usage_00231.pdb # 12: usage_00233.pdb # 13: usage_00269.pdb # 14: usage_00325.pdb # 15: usage_00334.pdb # 16: usage_00338.pdb # 17: usage_00431.pdb # 18: usage_00449.pdb # 19: usage_00500.pdb # 20: usage_00531.pdb # 21: usage_00561.pdb # # Length: 181 # Identity: 85/181 ( 47.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/181 ( 53.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/181 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW 59 usage_00002.pdb 1 -SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW 59 usage_00028.pdb 1 GPHSMRYYETATSRRGLGEPRYTSVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 60 usage_00029.pdb 1 GSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW 60 usage_00031.pdb 1 GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYW 60 usage_00084.pdb 1 -SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW 59 usage_00107.pdb 1 GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYW 60 usage_00214.pdb 1 ---SMRYYETATSRRGLGEPRYTSVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 57 usage_00217.pdb 1 -PHSMRYYETATSRRGLGEPRYTSVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 59 usage_00225.pdb 1 ---SMRYYETATSRRGLGEPRYTSVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 57 usage_00231.pdb 1 ------YFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEGPEYW 54 usage_00233.pdb 1 GPHSMRYFETAVSRPGLGEPRYISVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 60 usage_00269.pdb 1 ----LRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYW 56 usage_00325.pdb 1 GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYW 60 usage_00334.pdb 1 GPHSLRYFHTAVSRPGLGKPRFISVGYVDDTQFVRFDSDAENPRYEPRVRWMEQVEPEYW 60 usage_00338.pdb 1 GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYW 60 usage_00431.pdb 1 ----MRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYW 56 usage_00449.pdb 1 -SHSMRYFETSVSRPGLGEPRFIIVGYVDDTQFVRFDSDAETPRMEPRAPWMEQEGPEYW 59 usage_00500.pdb 1 GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYW 60 usage_00531.pdb 1 GPHSMRYYETATS------PRYTSVGYVDDKEFVRFDSDAENPRYEPQVPWMEQEGPEYW 54 usage_00561.pdb 1 -SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW 59 Y Ta S Pr VGYVD FVRFDSDAEnPR EP W EQegPEYW usage_00001.pdb 60 ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG 119 usage_00002.pdb 60 ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG 119 usage_00028.pdb 61 ERITQVAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQRMYGCDVGSDGRLLRGYEQFAYDG 120 usage_00029.pdb 61 ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG 120 usage_00031.pdb 61 ERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDG 120 usage_00084.pdb 60 ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG 119 usage_00107.pdb 61 ERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG 120 usage_00214.pdb 58 ERITQIAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQWMYGCDVGSDGRLLRGYEQFAYDG 117 usage_00217.pdb 60 ERITQIAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQWMYGCDVGSDGRLLRGYEQFAYDG 119 usage_00225.pdb 58 ERITQIAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQWMYGCDVGSDGRLLRGYEQFAYDG 117 usage_00231.pdb 55 ERETQIAKGHEQSFRGSLRTAQSYYNQSKGGSHTLQWMYGCDMGSDGRLLRGYLQFAYEG 114 usage_00233.pdb 61 ERITQVAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQRMYGCDVGSDGRLLRGYEQFAYDG 120 usage_00269.pdb 57 ERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDG 116 usage_00325.pdb 61 ERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDG 120 usage_00334.pdb 61 ERNTQIAKGNEQIFRVNLRTALRYYNQSAGGSHTFQRMYGCEVGSDWRLLRGYEQYAYDG 120 usage_00338.pdb 61 ERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG 120 usage_00431.pdb 57 ERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG 116 usage_00449.pdb 60 ERETQRAKGNEQSFHVSLRTLLGYYNQSESGSHTIQWMYGCKVGSDGRFLRGYLQYAYDG 119 usage_00500.pdb 61 ERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG 120 usage_00531.pdb 55 ERITQIAKGQEQWFRVNLRTLLG-Y-------HTLQWMYGCDVGSDGRLLRGYEQFAYDG 106 usage_00561.pdb 60 ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG 119 ER T AKG EQ Frv LR l Y HT Q GC SD RlLRGY Q AY G usage_00001.pdb 120 CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNG----- 174 usage_00002.pdb 120 CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKN------ 173 usage_00028.pdb 121 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKN------ 174 usage_00029.pdb 121 CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGN---- 176 usage_00031.pdb 121 CDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKNGNATLL 180 usage_00084.pdb 120 CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYL-------------------- 159 usage_00107.pdb 121 RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNG----- 175 usage_00214.pdb 118 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKNG----- 172 usage_00217.pdb 120 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKNG----- 174 usage_00225.pdb 118 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKNG----- 172 usage_00231.pdb 115 RDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEKDQAYLEGTCMQSLRRYLELG----- 169 usage_00233.pdb 121 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEG------------------ 162 usage_00269.pdb 117 CDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKN------ 170 usage_00325.pdb 121 CDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYLE------------------- 161 usage_00334.pdb 121 CDYIALNEDLKTWTAADMAALITKHKWEQAGDAERDRAYLEGTCVEWLRRYLQL------ 174 usage_00338.pdb 121 RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLE------------------- 161 usage_00431.pdb 117 RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL-------------------- 156 usage_00449.pdb 120 RDYIALNEDLKTWTAADVAAIITRRKWEQAGAAEYYRAYL-------------------- 159 usage_00500.pdb 121 RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKN------ 174 usage_00531.pdb 107 CDYIALNEDLRTWTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKNG----- 161 usage_00561.pdb 120 CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKN------ 173 DYIALNEDL TWTAaDmAA IT KWEQ G AE AYL usage_00001.pdb - usage_00002.pdb - usage_00028.pdb - usage_00029.pdb - usage_00031.pdb 181 R 181 usage_00084.pdb - usage_00107.pdb - usage_00214.pdb - usage_00217.pdb - usage_00225.pdb - usage_00231.pdb - usage_00233.pdb - usage_00269.pdb - usage_00325.pdb - usage_00334.pdb - usage_00338.pdb - usage_00431.pdb - usage_00449.pdb - usage_00500.pdb - usage_00531.pdb - usage_00561.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################