################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:54 2021 # Report_file: c_0147_30.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00004.pdb # 2: usage_00075.pdb # 3: usage_00076.pdb # 4: usage_00077.pdb # 5: usage_00078.pdb # 6: usage_00091.pdb # 7: usage_00092.pdb # 8: usage_00106.pdb # 9: usage_00127.pdb # 10: usage_00311.pdb # 11: usage_00364.pdb # 12: usage_00427.pdb # 13: usage_00455.pdb # # Length: 143 # Identity: 41/143 ( 28.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/143 ( 44.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/143 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -VQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 54 usage_00075.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00076.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00077.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00078.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00091.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00092.pdb 1 QVQLQESGPGLVKPSGTVSLTCAVSGGSISSS-YWWSWVRQPPGKGLEWIGEIYH-S--- 55 usage_00106.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGPI-NN-AYWTWIRQPPGKGLEYLGYVYH-T--- 52 usage_00127.pdb 1 --QLQESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSH-CASY 57 usage_00311.pdb 1 -VQLQESGPGLVKPSETLSLTCVVSGGSF-SS-YYWTWIRQSPGKGLEWIGEMNGNS--- 54 usage_00364.pdb 1 QVQLQESGPGLVKPSETLSVTCAVSGVSF-SS-FWWGWIRQSPGKGLEWIGTIYGSS--- 55 usage_00427.pdb 1 QVQLQQWGAGLLKPSETLSLTCGVYGESL--G-HYWSWVRQPPGKRLEWIGEIKH-N--- 53 usage_00455.pdb 1 --QLVESGPGLVKPLETLSLTCAVPGGSI-RR-NYWSWIRQPPGKGLEWIGHSYGSG--- 53 QLqesGpgLvkps T SlTC V G s W W RQ PGKgLEw G usage_00004.pdb 55 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 103 usage_00075.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00076.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00077.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00078.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00091.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00092.pdb 56 ---GNTNYNPSLKSRVTISVDKSKNLFSLKLSSVTAADTAVYYCARVALF---DI----- 104 usage_00106.pdb 53 ---GVTNYNPSLKSRLTITIDTSRKQLSLSLKFVTAADSAVYYCAREWAE---------- 99 usage_00127.pdb 58 WNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYT----- 112 usage_00311.pdb 55 ---GYTNYNPSLQSRVTISKDASKNQFSLKLTSLTAADTAVYYCARDAI----VM----- 102 usage_00364.pdb 56 ---GRGEYNPSLKSRTTISR-----QISLELTSVTAADTAIYYCSRGLFQ---PNGFSFT 104 usage_00427.pdb 54 ---GSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNW---------- 100 usage_00455.pdb 54 ---GSTNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTVWY---YT----- 102 G ynPSL SR T sL L svTAADtA YyCaR usage_00004.pdb 104 -LTG----GWFDPWGQGTLVT-- 119 usage_00075.pdb 105 -LTG----GWFDPWGQGTLVTVS 122 usage_00076.pdb 105 -LTG----GWFDPWGQGTLVTVS 122 usage_00077.pdb 105 -LTG----GWFDPWGQGTLVT-- 120 usage_00078.pdb 105 -LTG----GWFDPWGQGTLVTVS 122 usage_00091.pdb 105 -LTG----GWFDPWGQGTLVTV- 121 usage_00092.pdb 105 -LTG----GWFDPWGQGTLVTVS 122 usage_00106.pdb 100 -DGD--FGNAFHVWGQGTMVAV- 118 usage_00127.pdb 113 -DWPK--PAWVDLWGRGTLVTVS 132 usage_00311.pdb 103 -VFT-DMRGRVDVWGPGILVTVS 123 usage_00364.pdb 105 -LTS----YWFDVWGPGVPVTVS 122 usage_00427.pdb 101 PY------LPFDPWGQGTLVTVS 117 usage_00455.pdb 103 -SGT----HYFDHWGQGVLVTVS 120 d WG G Vt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################