################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:26:54 2021 # Report_file: c_0681_26.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00007.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00080.pdb # 7: usage_00081.pdb # 8: usage_00082.pdb # 9: usage_00083.pdb # 10: usage_00098.pdb # 11: usage_00111.pdb # 12: usage_00112.pdb # 13: usage_00156.pdb # 14: usage_00164.pdb # 15: usage_00165.pdb # 16: usage_00173.pdb # 17: usage_00174.pdb # 18: usage_00178.pdb # 19: usage_00179.pdb # 20: usage_00180.pdb # 21: usage_00181.pdb # 22: usage_00182.pdb # 23: usage_00183.pdb # 24: usage_00184.pdb # 25: usage_00185.pdb # 26: usage_00186.pdb # 27: usage_00187.pdb # 28: usage_00188.pdb # 29: usage_00189.pdb # 30: usage_00190.pdb # 31: usage_00240.pdb # 32: usage_00241.pdb # # Length: 56 # Identity: 10/ 56 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 56 ( 19.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 56 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00033.pdb 1 ----EARFKRQVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEA-------- 44 usage_00034.pdb 1 ----EARFKRQVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEA-------- 44 usage_00078.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMI-- 51 usage_00079.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAM--- 50 usage_00080.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00081.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00082.pdb 1 MTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 56 usage_00083.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMI-- 51 usage_00098.pdb 1 -----LRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICA--- 48 usage_00111.pdb 1 ---DKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAA--- 50 usage_00112.pdb 1 ---DKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAY-- 51 usage_00156.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 53 usage_00164.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAE------- 46 usage_00165.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAM--- 50 usage_00173.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00174.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00178.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00179.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00180.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00181.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 53 usage_00182.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00183.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 53 usage_00184.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00185.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00186.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00187.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00188.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 53 usage_00189.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00190.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA- 52 usage_00240.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAM--- 50 usage_00241.pdb 1 ---DKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE 53 V PGD L I A VDg A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################