################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:36:51 2021 # Report_file: c_0206_3.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00003.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00014.pdb # 8: usage_00019.pdb # 9: usage_00021.pdb # 10: usage_00022.pdb # 11: usage_00025.pdb # 12: usage_00026.pdb # 13: usage_00027.pdb # 14: usage_00030.pdb # 15: usage_00031.pdb # 16: usage_00032.pdb # 17: usage_00033.pdb # 18: usage_00034.pdb # 19: usage_00035.pdb # 20: usage_00037.pdb # 21: usage_00038.pdb # 22: usage_00039.pdb # 23: usage_00040.pdb # 24: usage_00041.pdb # 25: usage_00053.pdb # 26: usage_00057.pdb # 27: usage_00062.pdb # 28: usage_00063.pdb # 29: usage_00064.pdb # 30: usage_00065.pdb # 31: usage_00066.pdb # 32: usage_00068.pdb # 33: usage_00069.pdb # 34: usage_00075.pdb # # Length: 147 # Identity: 15/147 ( 10.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/147 ( 15.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/147 ( 39.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----------GLVQPGGSLRLSCAASGFN-LSY--SSMHWVRQAPGKGLEWVAYISPS-- 45 usage_00007.pdb 1 --INLVESGGGVVQPGRSLRLSCAASGFT-FSR--YGMHWVRQAPGKGLEWVAVVSSD-- 53 usage_00008.pdb 1 --INLVESGGGVVQPGRSLRLSCAASGFT-FSR--YGMHWVRQAPGKGLEWVAVVSSD-- 53 usage_00009.pdb 1 --VKLVESGGGLVQPGGSLRLSCGTSGFTLTD---DYMTWVRQPPGKALEWLGFIRDRA- 54 usage_00010.pdb 1 ---QLVESGGGLVQPGGSLRLSCAASGFN-IKD--TYIHWVRQAPGKGLEWVARIYPT-- 52 usage_00011.pdb 1 --VKLVESGGGLVQPGGSLRLSCATSGFT-FTN--YYMNWVRQPPGKALEWLVSIRNKAN 55 usage_00014.pdb 1 SEVQLVESGGGLVQPGGSLRLSCAASGFN-LYY--YSIHWVRQAPGKGLEWVASISPY-- 55 usage_00019.pdb 1 --VKLVQSGPGLVAPSQSLSITCTVSGFS-LTT--YGVSWVRQPPGKGLEWLGVIWG--- 52 usage_00021.pdb 1 ---QLVESGGGLVQPGGSLRLSCAASGFN-IKD--TYIHWVRQAPGKGLEWVARIYPT-- 52 usage_00022.pdb 1 ---KLVESEGGLVQPGSSMKLSCTASGFT-FSD--YYMAWVRQVPEKGLEWVANINYD-- 52 usage_00025.pdb 1 --VQLVESGGGVVQPGRSLRLSCSTSGFT-FSD--YYMYWVRQAPGKGLEWVAYMSNV-- 53 usage_00026.pdb 1 --VKLVESEGGLVQPGSSMKLSCTASGFT-FSD--YYMAWVRQVPEKGLEWVANINYD-- 53 usage_00027.pdb 1 ---QLKQSGPGLVQPSQSLSITCTVSGFS-LTN--YGVHWVRQSPGKGLEWLGVIWS--- 51 usage_00030.pdb 1 --VQLVESGGDLVKPGGSLKLSCAASGFS-FSS--YGMSWVRQTPDKRLEWVATISNG-- 53 usage_00031.pdb 1 --VQLVESGGDLVKPGGSLKLSCAASGFS-FSS--YGMSWVRQTPDKRLEWVATISNG-- 53 usage_00032.pdb 1 --VQLQESGGGLVQPGGSMKLSCVASGFT-FSN--YWMNWVRQSPEKGLEWVAEIRLKS- 54 usage_00033.pdb 1 ---KLQQSGGGVVQPGGSLRLSCAASGFT-FSD--YDMSWIRQAPGKGLEWVSGILGG-- 52 usage_00034.pdb 1 --VKLQQSGGGLVKPGASLKLSCVTSGFT-FRK--FGMSWVRQTSDKCLEWVASISTG-- 53 usage_00035.pdb 1 --VHLLESGGNLVQPGGSLRLSCAASGFT-FNI--FVMSWVRQAPGKGLEWVSGVFGS-- 53 usage_00037.pdb 1 ---QLQESGPGLVKPSETLSLTCTVSGGS-ISSSSYYWGWIRQPPGKGLEWIGSVYY--- 53 usage_00038.pdb 1 --VQLQESGGGLVQPGGSLRLSCAASGFT-FSS--AIMTWVRQAPGKGREWVSTIGSD-- 53 usage_00039.pdb 1 --VQLQESGGGSAQTGGSLRLSCAASGFT-FSH--GYMAWFRQAPEKEREWVACVRTS-- 53 usage_00040.pdb 1 --VKLEESGGGLVQPGGSMKLSCATSGFT-FSD--AWMDWVRQSPEKGLEWVAEIRNKAN 55 usage_00041.pdb 1 ---QLLESGGGLVQPGGSLRLSCAASGFT-FSY--YYMQWVRQAPGKGLEWVSYIGSS-- 52 usage_00053.pdb 1 --VQLQESGGGLVQPGGSLRLSCAASGFT-FSS--AIMTWVRQAPGKGREWVSTIGSD-- 53 usage_00057.pdb 1 ---QLVESGGGLVQPGGSLRLSCAASGFN-VSY--SSIHWVRQAPGKGLEWVAYIYPS-- 52 usage_00062.pdb 1 --VQLVESGGGLVQPGGSLRLSCAASGFT-FRN--SAMHWVRQAPGKGLEWVSSIWYS-- 53 usage_00063.pdb 1 --VKLVESGGGLVQPGGSLRLSCATSGFT-FTD--YYMSWVRQPPGKALEWLGFIRNKAK 55 usage_00064.pdb 1 --VKLVESGGGLVQPGGSLRLSCATSGFT-FTD--YYMSWVRQPPGKALEWLGFIRNKAK 55 usage_00065.pdb 1 --VQLLESGGGL---GGSLRLSCAASGFR-FDA--EDMGWVRQA----LEWVSSIYGP-- 46 usage_00066.pdb 1 -QVTLKESGPGILQPSQTLSLTCSFSGFS-LRTSRVGVSWIRQPSGKGLEWLAHIYW--- 55 usage_00068.pdb 1 --VYLVESGGDLVQPGSSLKVSCAASGFT-FSD--FWMYWVRQAPGKGLEWVGRIKNIP- 54 usage_00069.pdb 1 ---QLVESGGGVVQPGRSLRLSCAASGFT-FNN--YAIHWVRQAPGKGLEWVAFISYD-- 52 usage_00075.pdb 1 ---QLVES-GGLVQPGGSLRLSCAASGFN-VSS--YSIHWVRQAPGKGLEWVASISSY-- 51 C SGf W RQ EW usage_00003.pdb 46 Y-GYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSWE-----AY-W--- 95 usage_00007.pdb 54 G-RTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGG-----D------ 101 usage_00008.pdb 54 G-RTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGG-----D------ 101 usage_00009.pdb 55 NGYTTEYSASVKGRFTISRDNSQSIVYLQMNTLRVEDSATYYCARPKG-----Y------ 103 usage_00010.pdb 53 N-GYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----D------ 100 usage_00011.pdb 56 G-YTTDYSASVKGRFTISRDNSQSILYLEMNNLRAEDSATYYCARGYG-----Y------ 103 usage_00014.pdb 56 S-SSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGRW-----Y------ 103 usage_00019.pdb 53 D-GNTTYHSALISRLSISKDNSRSQVFLKLNSLHTDDTATYYCAGNY------------- 98 usage_00021.pdb 53 N-GYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----D------ 100 usage_00022.pdb 53 G-SSTYYLDSLKGRFIISRDIAKNILYLQMSSLRCEDTATYYCARLTN------------ 99 usage_00025.pdb 54 G-AITDYPDTVKGRFTISRDNSKNTLFLQMDSLRPEDTGVYFCARGTR-----D------ 101 usage_00026.pdb 54 G-SSTYYLDSLKGRFIISRDIAKNILYLQMSSLRCEDTATYYCARLTN------------ 100 usage_00027.pdb 52 G-GNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT-----YY----- 100 usage_00030.pdb 54 G-GYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRER-----Y------ 101 usage_00031.pdb 54 G-GYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRER-----Y------ 101 usage_00032.pdb 55 NNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTGVG------------- 101 usage_00033.pdb 53 S-ERSYYRDSVKGRFTISRDNSRKTLYLQMNSLRAEDTAVYYCARHGS-----P------ 100 usage_00034.pdb 54 G-YNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYS-----S------ 101 usage_00035.pdb 54 G-GNTDYADAVKGRFTITRDNSKNTLYLQMNSLRAEDTAIYYCAKHRV-----S------ 101 usage_00037.pdb 54 S-GGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIYGSGTF-YY----- 106 usage_00038.pdb 54 G-SITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSA-------------- 98 usage_00039.pdb 54 G-VSAYYADSVLGRFTISQDNAKSTLYLQMNNLKPEDTAMYYCAATSI-----S------ 101 usage_00040.pdb 56 N-HATYYAESVKGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCTGIYY-----H------ 103 usage_00041.pdb 53 G-GVTNYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGL-----G------ 100 usage_00053.pdb 54 G-SITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSA-------------- 98 usage_00057.pdb 53 S-GYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS-----T------ 100 usage_00062.pdb 54 G-SNTYYADSVKGRFTISRDNSKNTLYLQMNSLTAEDTAVYYCARFAG-----G------ 101 usage_00063.pdb 56 G-YTVEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDGY-----Y------ 103 usage_00064.pdb 56 G-YTVEYSASVKGRFTISRDNSQSILYLQMNT--AEDSATYYCARDGY-----Y------ 101 usage_00065.pdb 47 S-GSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYTS------------ 93 usage_00066.pdb 56 D-DDKRYNPSLESRLTISKDTSRNQVFLKITSVDTADTATYYCARRGFY-GRKYE----- 108 usage_00068.pdb 55 NNYATEYADSVRGRFTISRDDSRNSIYLQMNRLRVDDTAIYYCTRAGR-----F------ 103 usage_00069.pdb 53 G-SKNYYADSVKGRFTISRDNSKNTLFLQMNSLRPEDTAIYYCARVLF-----QQLV--- 103 usage_00075.pdb 52 Y-GSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDRV-----MY-YWSF 104 Y R I d l D yC usage_00003.pdb 96 ----RW--S----AMDYWGQGTLVTVS 112 usage_00007.pdb 102 -----NK-F----SFDYWGQGTLVTVS 118 usage_00008.pdb 102 -----NK-F----SFDYWGQGTLVTVS 118 usage_00009.pdb 104 -----FP-Y----AMDYWGQGTSVIVS 120 usage_00010.pdb 101 -----GF-Y----AMDVWGQGTLVTV- 116 usage_00011.pdb 104 -----G--A----WFAYWGQGTLVTVS 119 usage_00014.pdb 104 -----R--R----ALDYWGQGTLVTVS 119 usage_00019.pdb 99 --------Y----GMDYWGQGTSVTVS 113 usage_00021.pdb 101 -----GF-Y----AMDYWGQGTLVTVS 117 usage_00022.pdb 100 --------G----YLDVWGAGTTVTV- 113 usage_00025.pdb 102 -----G--S----WFAYWGQGTPVTV- 116 usage_00026.pdb 101 --------G----YLDVWGAGTTVTV- 114 usage_00027.pdb 101 -----D--Y----EFAYWGQGTLVTVS 116 usage_00030.pdb 102 -----DE-N----GFAYWGQGTLVTVS 118 usage_00031.pdb 102 -----DE-N----GFAYWGQGTLVTVS 118 usage_00032.pdb 102 -------------QFAYWGQGTTVTVS 115 usage_00033.pdb 101 GY-T-L--Y----AWDYWGQGTMVTVS 119 usage_00034.pdb 102 -----TS-Y----AMDYWGQGTTVTVS 118 usage_00035.pdb 102 -----YVLT----GFDSWGQGTLVTVS 119 usage_00037.pdb 107 -----Y--F----YMDVWGKGSTVT-- 120 usage_00038.pdb 99 ---------------GRRGPGTQVTVS 110 usage_00039.pdb 102 -----CS-S----GYMFWGQGTQVTV- 117 usage_00040.pdb 104 -----Y--P----WFAYWGQGTLVTVS 119 usage_00041.pdb 101 --------D----AFDIWGQGTMVTVS 115 usage_00053.pdb 99 ---------------GRRGPGTQVTV- 109 usage_00057.pdb 101 -----K--L----AMDYWGQGTLVTVS 116 usage_00062.pdb 102 -----W--G----AYDVWGQGTLVTV- 116 usage_00063.pdb 104 -----V--D----AMDYWGQGTSVTV- 118 usage_00064.pdb 102 -----V--D----AMDYWGQGTSVTV- 116 usage_00065.pdb 94 --------PPQNHGFDYWGQGTLVTV- 111 usage_00066.pdb 109 -----V--N----HFDYWGQGTTLTVS 124 usage_00068.pdb 104 --------D----HFDYWGQGTMVTVS 118 usage_00069.pdb 104 ----LY--A----PFDIWGQGTMVTV- 119 usage_00075.pdb 105 SKYGYP--Y----GMDYWGQGTLVTV- 124 G Gt vt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################