################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:34 2021 # Report_file: c_0454_8.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00035.pdb # 6: usage_00197.pdb # 7: usage_00212.pdb # 8: usage_00213.pdb # 9: usage_00225.pdb # # Length: 156 # Identity: 22/156 ( 14.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/156 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/156 ( 32.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ----------------------QSEEI-------------NMGLPVTDIGWPVESRGLYE 25 usage_00018.pdb 1 ----------------------QSEEI-------------NMGLPVTDIGWPVESRGLYE 25 usage_00019.pdb 1 ----------------------QSEEI-------------NMGLPVTDIGWPVESRGLYE 25 usage_00020.pdb 1 ----------------------QSEEI-------------NMGLPVTDIGWPVESRGLYE 25 usage_00035.pdb 1 MSDWMQAFD-GETEIIKYQIKGVGRRV-------------APDYVPR---WIIYPEGLYD 43 usage_00197.pdb 1 TRSIIRSTN-DAS-------LLQVEQV-------------HMEEPVTDMGWEIHPESFYK 39 usage_00212.pdb 1 TRQVVKNNS-EA--------FIGAESV-------------AMDNPKTEMGWEIYPQGLYD 38 usage_00213.pdb 1 TRQVVKNNS-EA--------FIGAESV-------------AMDNPKTEMGWEIYPQGLYD 38 usage_00225.pdb 1 -RLVYGAKDG------------HLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLEN 47 p W gly usage_00017.pdb 26 VLHYLQ-KY-GNIDIYITENGACINDEVV-NGKVQDDRRISYMQQHLVQVHRTIHDGLHV 82 usage_00018.pdb 26 VLHYLQ-KY-GNIDIYITENGACINDEVV-NGKVQDDRRISYMQQHLVQVHRTIHDGLHV 82 usage_00019.pdb 26 VLHYLQ-KY-GNIDIYITENGACINDEVV-NGKVQDDRRISYMQQHLVQVHRTIHDGLHV 82 usage_00020.pdb 26 VLHYLQ-KY-GNIDIYITENGACINDEVV-NGKVQDDRRISYMQQHLVQVHRTIHDGLHV 82 usage_00035.pdb 44 QIMRVKNDYPNYKKIYITENGLGYKDEFV-DNTVYDDGRIDYVKQHLEVLSDAIADGANV 102 usage_00197.pdb 40 LLTRIEKDFSKGLPILITENGAAMRDELV-NGQIEDTGRQRYIEEHLKACHRFIEEGGQL 98 usage_00212.pdb 39 LLTRIHRDY-GNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPL 97 usage_00213.pdb 39 LLTRIHRDY-GNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPL 97 usage_00225.pdb 48 LLKYLNNAY--ELPMIITENGMAD-A--------ADRYRPHYLVSHLKAVYNAMKEGADV 96 l y ITENG d D R Y H i G usage_00017.pdb 83 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTP 118 usage_00018.pdb 83 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTP 118 usage_00019.pdb 83 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTP 118 usage_00020.pdb 83 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTP 118 usage_00035.pdb 103 KGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYP 138 usage_00197.pdb 99 KGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTP 134 usage_00212.pdb 98 KGYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQERTI 133 usage_00213.pdb 98 KGYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQERTI 133 usage_00225.pdb 97 RGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYL 132 kGY WS DnfeWa Gy RfG v Tq R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################