################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:02 2021 # Report_file: c_1266_88.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00002.pdb # 2: usage_00048.pdb # 3: usage_00251.pdb # 4: usage_00282.pdb # 5: usage_00466.pdb # 6: usage_00810.pdb # 7: usage_01063.pdb # 8: usage_01079.pdb # 9: usage_01080.pdb # 10: usage_01234.pdb # 11: usage_01235.pdb # # Length: 45 # Identity: 1/ 45 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 45 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 45 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 LDFYIHESVQ--RHGHGRELFQYLQKERV----EPHQLAI-DR-- 36 usage_00048.pdb 1 LAFYVTETLQ--RHGYGSELFDFMLKHKQ---VEPAQMAYD-R-- 37 usage_00251.pdb 1 NDLYVDENSR--VKGAGGKLIQFVYDEADKLGTPS---VYW-CTD 39 usage_00282.pdb 1 NDIYVAEEARRQ--LVADHLLQHAKQARETH-AVR---RVS-T-- 36 usage_00466.pdb 1 LDFYIHESVQ--RHGHGRELFQYMLQKER---VEPHQLAID-R-- 37 usage_00810.pdb 1 -NIAVAEHLQ--GKGIGKKLLRHAVETAKGYGSKL---EVG-TG- 37 usage_01063.pdb 1 YDLAVAKAHR--RRGIATALIEKLKELGAARGAYV---IFV-Q-- 37 usage_01079.pdb 1 LDFYIHESVQ--RHGHGRELFQYMLQKER---VEPHQLAID-R-- 37 usage_01080.pdb 1 LDFYIHESVQ--RHGHGRELFQYMLQKER---VEPHQLAID-R-- 37 usage_01234.pdb 1 LDFYVTETLQ--RHGYGSELFDFLKHKQV----EPAQAYD-R--- 35 usage_01235.pdb 1 LDFYVTETLQ--RHGYGSELFDFLKHKQV----EPAQAYD-R--- 35 e g L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################