################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:28 2021 # Report_file: c_0841_38.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00045.pdb # 6: usage_00089.pdb # 7: usage_00090.pdb # 8: usage_00091.pdb # 9: usage_00092.pdb # 10: usage_00093.pdb # # Length: 78 # Identity: 3/ 78 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 78 ( 23.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 78 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---------LWLEQQLKQKFGLKDVVVVSGN-DEDEETQLA--GLHGAQLLDRLLEPGDI 48 usage_00005.pdb 1 -------ENLWLEQQLKQKFGLKDVVVVS-----DEETQLA--GLHGAQLLDRLLEPGDI 46 usage_00006.pdb 1 ----------WLEQQLKQKFGLKDVVVVSGN-DEDEETQLA--GLHGAQLLDRLLEPGDI 47 usage_00007.pdb 1 -------ENLWLEQQLKQKFGLKDVVVVSG---EDEETQLA--GLHGAQLLDRLLEPGDI 48 usage_00045.pdb 1 ---------LELETRLQK-YGIRQVIVVEATEPDDEESIKQAIGSAAAHYLETSLSAQDH 50 usage_00089.pdb 1 FD-----TNFKLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLIDDNKI 55 usage_00090.pdb 1 --------NLWLEQQLKQKFGLKEAVVASS-----EEEQLSAMGQHGALLVDRLLEPGDI 47 usage_00091.pdb 1 --NYDYNENLWLEQQLKQKFGLKEAVVASSD-GLLEEEQLSAMGQHGALLVDRLLEPGDI 57 usage_00092.pdb 1 --------NLWLEQQLKQKFGLKEAVVA--------E-QLSAMGQHGALLVDRLLEPGDI 43 usage_00093.pdb 1 --NYDYNENLWLEQQLKQKFGLKEAVVASSD-GLLEEEQLSAMGQHGALLVDRLLEPGDI 57 LE lk gl v e g A ll di usage_00004.pdb 49 VGFSWGR-AVSALV-ENL 64 usage_00005.pdb 47 VGFSWGR-AVSALV-ENL 62 usage_00006.pdb 48 VGFSWGR-AVSALV-ENL 63 usage_00007.pdb 49 VGFSWGR-AVSALV-ENL 64 usage_00045.pdb 51 IGISSWSSTIRAVSH--- 65 usage_00089.pdb 56 GFSWG-K-SLSNLV-DL- 69 usage_00090.pdb 48 IGFSWGR-AVRSLV-ENL 63 usage_00091.pdb 58 IGFSWGR-AVRSLV-ENL 73 usage_00092.pdb 44 IGFSWGR-AVRSLV-ENL 59 usage_00093.pdb 58 IGFSWGR-AVRSLV-ENL 73 g s lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################