################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:33 2021 # Report_file: c_1249_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00164.pdb # 2: usage_00166.pdb # 3: usage_00167.pdb # 4: usage_00215.pdb # 5: usage_00455.pdb # 6: usage_00516.pdb # 7: usage_00517.pdb # 8: usage_00523.pdb # # Length: 38 # Identity: 2/ 38 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 38 ( 63.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 38 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00164.pdb 1 -GLVAAAEPGVVSWSPAAA-GELDSHWFREQTGGILRE 36 usage_00166.pdb 1 --------PGVVSWSPAAA-GELDSHWFREQTGGILRE 29 usage_00167.pdb 1 -GLVAAAEPGVVSWSPAAA-GELDSHWFREQTGGILRE 36 usage_00215.pdb 1 --------PGVVSWSPAAA-GELDSHWFREQTGGILRE 29 usage_00455.pdb 1 IA-FASNYGIVELDP-E-CQVDIDMDK---LNTVLIAD 32 usage_00516.pdb 1 ----AAAEPGVVSWSPAAA-GELDSHWFREQTGGILRE 33 usage_00517.pdb 1 ----AAAEPGVVSWSPAAA-GELDSHWFREQTGGILRE 33 usage_00523.pdb 1 ----AAAEPGVVSWSPAAA-GELDSHWFREQTGGILRE 33 pgVvsws a a gelDshw qtggilre #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################