################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:50 2021 # Report_file: c_0916_14.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00008.pdb # 2: usage_00026.pdb # 3: usage_00333.pdb # 4: usage_00334.pdb # 5: usage_00491.pdb # 6: usage_00537.pdb # 7: usage_00538.pdb # 8: usage_00539.pdb # 9: usage_00540.pdb # 10: usage_00541.pdb # 11: usage_00542.pdb # 12: usage_00543.pdb # 13: usage_00553.pdb # 14: usage_00589.pdb # 15: usage_00602.pdb # 16: usage_00749.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 44 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 44 ( 65.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ---------VRTSHAIKRA--------DGSTIRFDR-NAAVIIN 26 usage_00026.pdb 1 ---SV-----Q-LQNVTKA-WGEVVVS--KDINLDIH-----E- 26 usage_00333.pdb 1 ---------VRQRKHWKRK--------DGVYIYFED-NAGV--- 23 usage_00334.pdb 1 KVCTGLV--VRQRKHWKRK--------DGVYIYFED-NAGV--- 30 usage_00491.pdb 1 ---------VRTSHAIKRA--------DGSTIRFDR-NAAVIIN 26 usage_00537.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00538.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00539.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00540.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00541.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00542.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00543.pdb 1 --LEAVV--VRQRKPIRRP--------DGTRVKFED-NAAVIVD 31 usage_00553.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 usage_00589.pdb 1 ---------VRTSHAIKRA--------DGSTIRFDR-NAAVIIN 26 usage_00602.pdb 1 -------PITLPAGTKFTGK------ENGKTFVSKD-PVLVP-- 28 usage_00749.pdb 1 ---------VRQRKPIRRP--------DGTRVKFED-NAAVIVD 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################