################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:16 2021 # Report_file: c_0582_12.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00026.pdb # 4: usage_00056.pdb # 5: usage_00067.pdb # 6: usage_00070.pdb # 7: usage_00162.pdb # 8: usage_00169.pdb # 9: usage_00190.pdb # 10: usage_00236.pdb # 11: usage_00265.pdb # 12: usage_00268.pdb # 13: usage_00270.pdb # 14: usage_00271.pdb # 15: usage_00273.pdb # 16: usage_00291.pdb # 17: usage_00314.pdb # # Length: 102 # Identity: 1/102 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/102 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/102 ( 40.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -RLFVGNLP-ADITEDEFKRLFAKYGEPGEVFINK---------G-K-GFGFIKLES--- 44 usage_00003.pdb 1 -RLFVGNLP-ADITEDEFKRLFAKYGEPGEVFINK---------G-K-GFGFIKLES--- 44 usage_00026.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00056.pdb 1 -KVFVGGLP-PDIDEDEITASFRRFGPLV-VDWPHKAESKSYFPP-K-GYAFLLFQE--- 52 usage_00067.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00070.pdb 1 RSVFVSGFP-RGVDSAQLSEYFLAFGPVASVVMDK---------D-KGVFAIVEMGD--- 46 usage_00162.pdb 1 -RLWVGGLG-PNTSLAALAREFDRFGSIRTIDHVK---------G-D-SFAYIQYES--- 44 usage_00169.pdb 1 -TAYIGNIP-HFATEADLIPLFQNFGFILDFKHYP---------E-K-GCCFIKYDT--- 44 usage_00190.pdb 1 FIVFVGSLP-RDITAVELQNHFKNSS-PDQIRLRA---------D-K-GIAFLEFDADKD 47 usage_00236.pdb 1 -KVFVGRCT-EDMTEDELREFFSQYGDVMDVFIPK---------PFR-AFAFVTFAD--- 45 usage_00265.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00268.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00270.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00271.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00273.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00291.pdb 1 -RLFVGNLP-PDITEEEMRKLFEKYGKAGEVFIHK---------D-K-GFGFIRLET--- 44 usage_00314.pdb 1 -RLFIGNLPLKNVSKEDLFRIFSPYGHIMQINIKN-------------AFGFIQFDN--- 43 g F g usage_00001.pdb 45 ---RALAEIAKAELDD---------TPMR---G-RQ-LRVRF 69 usage_00003.pdb 45 ---RALAEIAKAELDD---------TPMR---G-RQ-LRVRF 69 usage_00026.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00056.pdb 53 ---ESSVQALIDA-CLEEDGKLYLCVSSPTIKD-KP-VQIRP 88 usage_00067.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00070.pdb 47 ---VGAREAVLSQ-SQ---------HSLG---G-HR-LRVR- 69 usage_00162.pdb 45 ---LDAAQAACAKMRG---------FPLG---GPDRRLRVDF 71 usage_00169.pdb 45 ---HEQAAVCIVALAN---------FPFQ---G-RN-LRTG- 68 usage_00190.pdb 48 RTGIQRRMDIALLQHG---------TLLK---E-KK-IN-VE 74 usage_00236.pdb 46 ---DQIAQSLCG--ED---------LIIK---G-IS-VHISN 68 usage_00265.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00268.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00270.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00271.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00273.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00291.pdb 45 ---RTLAEIAKVELDN---------MPLR---G-KQ-LRVRF 69 usage_00314.pdb 44 ---PQSVRDAIECESQ---------EMNF---G-KK-LILEV 68 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################