################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:26 2021 # Report_file: c_0857_19.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00138.pdb # 8: usage_00139.pdb # 9: usage_00173.pdb # 10: usage_00174.pdb # 11: usage_00175.pdb # # Length: 68 # Identity: 21/ 68 ( 30.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 68 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 68 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ----NDSEKAQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFH 56 usage_00042.pdb 1 ----NDSEKAQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFH 56 usage_00043.pdb 1 -----DSEKAQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFH 55 usage_00061.pdb 1 TTIEDEDTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFH 60 usage_00062.pdb 1 ------DTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFH 54 usage_00063.pdb 1 ------DTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFH 54 usage_00138.pdb 1 --------TQREQEIIRLTQQLITSITAKDFDSYSKLVDPKITAFEPEALGNQVEGLEFH 52 usage_00139.pdb 1 ---------QREQEIIRLTQQLITSITAKDFDSYSKLVDPKITAFEPEALGNQVEGLEFH 51 usage_00173.pdb 1 ---------VRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFH 51 usage_00174.pdb 1 --------MVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFH 52 usage_00175.pdb 1 -------AKVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFH 53 Q I T L I Df Y D T FEPealGN EG FH usage_00041.pdb 57 RFYFD--- 61 usage_00042.pdb 57 RFYFD--- 61 usage_00043.pdb 56 RFYFD--- 60 usage_00061.pdb 61 RFYFENLW 68 usage_00062.pdb 55 RFYFE--- 59 usage_00063.pdb 55 RFYFENL- 61 usage_00138.pdb 53 KFYFDN-- 58 usage_00139.pdb 52 KFYFDN-- 57 usage_00173.pdb 52 RFYFEN-- 57 usage_00174.pdb 53 RFYFEN-- 58 usage_00175.pdb 54 KFYFD--- 58 FYF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################