################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:43 2021 # Report_file: c_1153_73.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00486.pdb # 2: usage_01528.pdb # 3: usage_01893.pdb # 4: usage_01903.pdb # 5: usage_01904.pdb # 6: usage_01905.pdb # 7: usage_01906.pdb # 8: usage_01907.pdb # 9: usage_02038.pdb # 10: usage_02039.pdb # 11: usage_02040.pdb # 12: usage_02041.pdb # 13: usage_02042.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 45 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 45 ( 64.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00486.pdb 1 ----------------GLYSKVVDIKD-GKVIFNEKLALPVKPMI 28 usage_01528.pdb 1 TGFHIGKQIAP-------GVPWLKAVEEDIFLAL--------KSG 30 usage_01893.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 usage_01903.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FCQLPH--------I-- 30 usage_01904.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FCQLPH--------I-- 30 usage_01905.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FCQLPH--------I-- 30 usage_01906.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-WKRLPH--------I-- 30 usage_01907.pdb 1 ---RFQAVL--TIRGGESVFKIVEIND-WKKLPH--------I-- 29 usage_02038.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 usage_02039.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 usage_02040.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 usage_02041.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 usage_02042.pdb 1 --PRFQAVL--TIRGGESVFKIVEIND-FKQLPH--------I-- 30 k v i d l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################