################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:01 2021 # Report_file: c_1448_44.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00309.pdb # 2: usage_00368.pdb # 3: usage_00491.pdb # 4: usage_00513.pdb # 5: usage_00623.pdb # 6: usage_00857.pdb # 7: usage_01392.pdb # 8: usage_01393.pdb # 9: usage_01394.pdb # 10: usage_01470.pdb # 11: usage_01471.pdb # 12: usage_01513.pdb # 13: usage_01784.pdb # 14: usage_01791.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 33 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 33 ( 78.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00309.pdb 1 LA----PYA-------KGG-KIGLF-------- 13 usage_00368.pdb 1 LA----PYA-------KGG-KIGLFG------- 14 usage_00491.pdb 1 LA----PYA-------KGG-KIGLF-------- 13 usage_00513.pdb 1 -I----NVA-------NDLPFVLFGGM------ 15 usage_00623.pdb 1 LA----PYA-------KGG-KIGLF-------- 13 usage_00857.pdb 1 MF----PIA-------KGG-SAAVPG------- 14 usage_01392.pdb 1 LA----PYA-------KGG-KIGLFGG------ 15 usage_01393.pdb 1 LA----PYA-------KGG-KIGLFGG------ 15 usage_01394.pdb 1 LA----PYA-------KGG-KIGLFGGA----- 16 usage_01470.pdb 1 ------------A--APAV-PGRIG---EAPFA 15 usage_01471.pdb 1 ------------A--APAV-PGRIG---EAPFA 15 usage_01513.pdb 1 FF----PQA-------KGG-TAAIP-------- 13 usage_01784.pdb 1 --G---DGDYGKLGR-GGS-DGCK--------- 17 usage_01791.pdb 1 ---AFYPEG-------GGQ-PYDTG-V------ 15 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################