################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:26 2021 # Report_file: c_0468_10.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00022.pdb # 2: usage_00046.pdb # 3: usage_00047.pdb # 4: usage_00049.pdb # 5: usage_00065.pdb # 6: usage_00084.pdb # 7: usage_00085.pdb # 8: usage_00086.pdb # # Length: 80 # Identity: 2/ 80 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 80 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 80 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 GTIAVDGSSTVFPISQAVAEEFEGKFPEVKLT-VASGTGGGFKKFIAEEIDVTGASRPIT 59 usage_00046.pdb 1 --LTGAGATFPAPVYAKWADTYQKETG-NKVNYQGIGSSGGVKQIIANTVDFGASDAPLS 57 usage_00047.pdb 1 --LTGAGATFPAPVYAKWADTYQKETG-NKVNYQGIGSSGGVKQIIANTVDFGASDAPLS 57 usage_00049.pdb 1 KIVSIGGSTTVSPILDEMILRYDKINNNTKVTYDAQGSSVGINGLFNKIYKIAISSRDLT 60 usage_00065.pdb 1 -NLSSVGSDTLANLMTMWAEEYKRLYPNVNIQIQAAGSSTAPPALTEGTANLGPMSRKMK 59 usage_00084.pdb 1 -DVTGAGASFIYPVMSKWSADYNAATK-KQVNYQSIGSGGGIAQIKAASVDFGSSDAPLK 58 usage_00085.pdb 1 -DVTGAGASFIYPVMSKWSADYNAATK-KQVNYQSIGSGGGIAQIKAASVDFGSSDAPLK 58 usage_00086.pdb 1 -DVTGAGASFIYPVMSKWSADYNAATK-KQVNYQSIGSGGGIAQIKAASVDFGSSDAPLK 58 G p y Gs g usage_00022.pdb 60 EKEAAE-CKAKGIDYVEFQ- 77 usage_00046.pdb 58 ---DEK-LAQ--EGLFQFP- 70 usage_00047.pdb 58 ---DEK-LAQ--EGLFQFP- 70 usage_00049.pdb 61 ----KE-EIE--QGAKE-TV 72 usage_00065.pdb 60 DVELQAFEQK-YGYKPTAVP 78 usage_00084.pdb 59 ---PEE-LAA--AGLAQFP- 71 usage_00085.pdb 59 ---PEE-LAA--AGLAQFP- 71 usage_00086.pdb 59 ---PEE-LAA--AGLAQFP- 71 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################