################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:51 2021 # Report_file: c_1228_108.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00071.pdb # 2: usage_00686.pdb # 3: usage_00704.pdb # # Length: 70 # Identity: 1/ 70 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 70 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 70 ( 65.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 G------------------------VLH--NAGLLGDVCPMSE-QNPQV-WQDVMQVNVN 32 usage_00686.pdb 1 -DFVVFLVDDVHQHKPLAARVPNKAHDLVIYVNVDD-------EP----TT-----VQVD 43 usage_00704.pdb 1 -DFVVFLVDDVHQGKPLEARIPVKAQDLLIWVNVDE-------EP----ST-----IQID 43 dl vnvd p t vqvd usage_00071.pdb 33 ATFMLTQAL- 41 usage_00686.pdb 44 ELTAQVKAFN 53 usage_00704.pdb 44 ALTEQVQAF- 52 alt qvqAf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################