################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:05 2021 # Report_file: c_0863_21.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01428.pdb # 2: usage_01429.pdb # 3: usage_01430.pdb # 4: usage_01431.pdb # 5: usage_01432.pdb # # Length: 85 # Identity: 59/ 85 ( 69.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 85 ( 74.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 85 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01428.pdb 1 -TINMGMQMRAWYDIKSLDSLNRVVDVEGINS-SIAKVNKLIDSQVNQGIASENIILAGF 58 usage_01429.pdb 1 VTINMGMQMRAWYDIKSLDSLNRVVDVEGINS-SIAKVNKLIDSQVNQGIASENIILAGF 59 usage_01430.pdb 1 VTINMGMQMRAWYDIKSLDSLNRVVDVEGINS-SIAKVNKLIDSQVNQGIASENIILAGF 59 usage_01431.pdb 1 -----------WYDIKS-------VDVEGINS-SIAKVNKLIDSQVNQGIASENIILAGF 41 usage_01432.pdb 1 -----------WYDIKS---------V-EGINSSIAKVNKLIDSQVNQGIASENIILAGF 39 WYDIKS V gins SIAKVNKLIDSQVNQGIASENIILAGF usage_01428.pdb 59 SQGGIIATYTAITSQRKLGGIMALS 83 usage_01429.pdb 60 SQGGIIATYTAITSQRKLGGIMALS 84 usage_01430.pdb 60 SQGGIIATYTAITSQRKLGGIMALS 84 usage_01431.pdb 42 SQGGIIATYTAITSQRKLGGIMALS 66 usage_01432.pdb 40 SQGGIIATYTAITSQRKLGGIMALS 64 SQGGIIATYTAITSQRKLGGIMALS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################