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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:48:20 2021
# Report_file: c_0378_4.html
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#====================================
# Aligned_structures: 8
#   1: usage_00016.pdb
#   2: usage_00058.pdb
#   3: usage_00059.pdb
#   4: usage_00332.pdb
#   5: usage_00572.pdb
#   6: usage_00573.pdb
#   7: usage_00581.pdb
#   8: usage_01052.pdb
#
# Length:        126
# Identity:       79/126 ( 62.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     79/126 ( 62.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           46/126 ( 36.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00016.pdb         1  ---PPEVAVF--------------LVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPL-   42
usage_00058.pdb         1  -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK   55
usage_00059.pdb         1  -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK   55
usage_00332.pdb         1  -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK   55
usage_00572.pdb         1  -----EVAVFEPS--I-SHTQKATLVCLATGFYPDHVELSWWVNG--VHSGVCTDPQPLK   50
usage_00573.pdb         1  NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK   60
usage_00581.pdb         1  -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLK   55
usage_01052.pdb         1  -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK   55
                                EVAVF              LVCLATGFYPDHVELSWWVNG  VHSGV TDPQPL 

usage_00016.pdb        43  ---------YALSSRLRVSATFWQNPRNHFRCQVQFYGLA-----------KPVTQIVSA   82
usage_00058.pdb        56  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  114
usage_00059.pdb        56  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  114
usage_00332.pdb        56  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEW-----KPVTQIVSA  109
usage_00572.pdb        51  E-----DSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  104
usage_00573.pdb        61  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  119
usage_00581.pdb        56  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  114
usage_01052.pdb        56  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL-SENDEWTQDRAKPVTQIVSA  114
                                    YALSSRLRVSATFWQNPRNHFRCQVQFYGL            KPVTQIVSA

usage_00016.pdb        83  EAWGRA   88
usage_00058.pdb       115  EAW---  117
usage_00059.pdb       115  EAW---  117
usage_00332.pdb       110  EAWGRA  115
usage_00572.pdb       105  EAWG--  108
usage_00573.pdb       120  EAW---  122
usage_00581.pdb       115  EAW---  117
usage_01052.pdb       115  EAW---  117
                           EAW   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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