################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:35:28 2021 # Report_file: c_0941_29.html ################################################################################################ #==================================== # Aligned_structures: 45 # 1: usage_00183.pdb # 2: usage_00260.pdb # 3: usage_00375.pdb # 4: usage_00376.pdb # 5: usage_00377.pdb # 6: usage_00378.pdb # 7: usage_00379.pdb # 8: usage_00562.pdb # 9: usage_00563.pdb # 10: usage_00737.pdb # 11: usage_00741.pdb # 12: usage_00764.pdb # 13: usage_00765.pdb # 14: usage_00766.pdb # 15: usage_00767.pdb # 16: usage_01088.pdb # 17: usage_01089.pdb # 18: usage_01121.pdb # 19: usage_01437.pdb # 20: usage_01487.pdb # 21: usage_01488.pdb # 22: usage_01489.pdb # 23: usage_01490.pdb # 24: usage_01491.pdb # 25: usage_01492.pdb # 26: usage_01653.pdb # 27: usage_01655.pdb # 28: usage_01656.pdb # 29: usage_01657.pdb # 30: usage_01658.pdb # 31: usage_01659.pdb # 32: usage_01660.pdb # 33: usage_01826.pdb # 34: usage_01827.pdb # 35: usage_01828.pdb # 36: usage_01829.pdb # 37: usage_02027.pdb # 38: usage_02028.pdb # 39: usage_02029.pdb # 40: usage_02149.pdb # 41: usage_02150.pdb # 42: usage_02151.pdb # 43: usage_02152.pdb # 44: usage_02195.pdb # 45: usage_02196.pdb # # Length: 98 # Identity: 0/ 98 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 98 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/ 98 ( 66.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00183.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00260.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00375.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00376.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00377.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00378.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00379.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00562.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00563.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00737.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00741.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00764.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00765.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00766.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_00767.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01088.pdb 1 RLAFAG-----LKY----ADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYS-----DD 46 usage_01089.pdb 1 --ATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 28 usage_01121.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01437.pdb 1 AVEILDDDNFLGA-E---N-AFNLFVCQ-------------------------KDS-AAT 29 usage_01487.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01488.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01489.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01490.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01491.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01492.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01653.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01655.pdb 1 --ATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 28 usage_01656.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01657.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01658.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01659.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01660.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01826.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01827.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01828.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_01829.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02027.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02028.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02029.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02149.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02150.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02151.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02152.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02195.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 usage_02196.pdb 1 GVATYR-----NSNFFGLVDGLNFAVQY-------------------------LGKNERD 30 a nf v d usage_00183.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00260.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00375.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00376.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00377.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00378.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00379.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00562.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00563.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00737.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00741.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00764.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00765.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00766.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_00767.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01088.pdb 47 FFVGRVGG-VATYRNSNFFGLVDGLNFAVQYLGKNERD 83 usage_01089.pdb 29 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA-D-- 59 usage_01121.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01437.pdb 30 TDEERQ-HLQEVGLFHL----G---------------- 46 usage_01487.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01488.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01489.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01490.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01491.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01492.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01653.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01655.pdb 29 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 58 usage_01656.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01657.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01658.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01659.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01660.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01826.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01827.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01828.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_01829.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02027.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02028.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02029.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02149.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02150.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02151.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02152.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02195.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 usage_02196.pdb 31 TARRSNGDGVGGSISYE----YEGFGIVGAYGAA---- 60 t v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################