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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:09:15 2021
# Report_file: c_0875_176.html
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#====================================
# Aligned_structures: 4
#   1: usage_00231.pdb
#   2: usage_00431.pdb
#   3: usage_00451.pdb
#   4: usage_00452.pdb
#
# Length:        125
# Identity:       49/125 ( 39.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     50/125 ( 40.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/125 ( 16.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00231.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIA---YKWGQCWDDVHYGAE   57
usage_00431.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIA---Y-KWGQWDDVHYGAE   56
usage_00451.pdb         1  YRDELVWAAAWLYRATNDNTYLNTAESLYDEFG---------LQNWGGGLNWDSKVSGVQ   51
usage_00452.pdb         1  YRDELVWAAAWLYRATNDNTYLNTAESLYDEFG---------LQNWGGGLNWDSKVSGVQ   51
                             D L WAA WLY ATND TYL  AES     G               g  WD    G  

usage_00231.pdb        58  LLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGV  117
usage_00431.pdb        57  LLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGV  116
usage_00451.pdb        52  VLLAKLTNKQAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLRHAANAAFIMLE  106
usage_00452.pdb        52  VLLAKLTNKQAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLRHAANAAFIMLE  106
                            LLAKLTNKQ YKD                    TPKGL     WG LRHA   AF    

usage_00231.pdb       118  YAEW-  121
usage_00431.pdb       117  YAEW-  120
usage_00451.pdb       107  AAELG  111
usage_00452.pdb       107  AAE--  109
                            AE  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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