################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:56 2021 # Report_file: c_0690_28.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00007.pdb # 2: usage_00011.pdb # 3: usage_00038.pdb # 4: usage_00066.pdb # 5: usage_00113.pdb # 6: usage_00114.pdb # 7: usage_00115.pdb # 8: usage_00382.pdb # 9: usage_00383.pdb # 10: usage_00392.pdb # 11: usage_00434.pdb # 12: usage_00464.pdb # # Length: 73 # Identity: 30/ 73 ( 41.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 73 ( 58.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 73 ( 5.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 usage_00011.pdb 1 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK 60 usage_00038.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 usage_00066.pdb 1 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDR--KKKFQTKVHRK 58 usage_00113.pdb 1 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDR--KKKFQTKVHRK 58 usage_00114.pdb 1 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDR--KKKFQTKVHRK 58 usage_00115.pdb 1 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDR--KKKFQTKVHRK 58 usage_00382.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 usage_00383.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 usage_00392.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALD--GTSDPYVKVFLLPDK--KKKFETKVHRK 56 usage_00434.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 usage_00464.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRK 58 G L Y qL V I qa LpA D G SDPyVK LlPD KkKf TkvhrK usage_00007.pdb 59 TLNPVFNEQFTFK 71 usage_00011.pdb 61 TLNPEFNEEFFYD 73 usage_00038.pdb 59 TLNPVFNEQFTFK 71 usage_00066.pdb 59 TLNPIFNETFQFS 71 usage_00113.pdb 59 TLNPIFNETFQFS 71 usage_00114.pdb 59 TLNPIFNETFQFS 71 usage_00115.pdb 59 TLNPIFNETFQFS 71 usage_00382.pdb 59 TLNPVFNEQFTFK 71 usage_00383.pdb 59 TLNPVFNEQFTFK 71 usage_00392.pdb 57 TLNPVFNEQFTFK 69 usage_00434.pdb 59 TLNPVFNEQFTFK 71 usage_00464.pdb 59 TLNPVFNEQFTFK 71 TLNP FNE F f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################