################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:40 2021 # Report_file: c_1200_115.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02153.pdb # 2: usage_02607.pdb # 3: usage_02608.pdb # 4: usage_02609.pdb # 5: usage_02610.pdb # 6: usage_02611.pdb # 7: usage_03679.pdb # 8: usage_04040.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 48 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 48 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02153.pdb 1 --DSFLLDL--GL-IARVNFSTI-----VQETGFVTGYIAVLHD---- 34 usage_02607.pdb 1 LETDFSFEVPGVA-RFRVNAFNQ-----N------RGAGAVFR----- 31 usage_02608.pdb 1 LETDFSFEVPGVA-RFRVNAFNQ-----N------RGAGAVFRTIPSK 36 usage_02609.pdb 1 LETDFSFEVPGVA-RFRVNAFNQ-----N------RGAGAVFRTIPSK 36 usage_02610.pdb 1 LETDFSFEVPGVA-RFRVNAFNQ-----N------RGAGAVFRTIPSK 36 usage_02611.pdb 1 LETDFSFEVPGVA-RFRVNAFNQ-----N------RGAGAVFRTIPSK 36 usage_03679.pdb 1 KEMDFAYTIPGVA-RFRCNLLRQ-----R------GSFGLVMRVVSE- 35 usage_04040.pdb 1 -----DIYID-NGKVCGFLTEMVANNDGI------EAIICGIGIN--- 33 r n v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################