################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:21 2021 # Report_file: c_0024_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00141.pdb # 2: usage_00239.pdb # 3: usage_00240.pdb # 4: usage_00395.pdb # 5: usage_00396.pdb # 6: usage_00397.pdb # 7: usage_00398.pdb # 8: usage_00420.pdb # 9: usage_00421.pdb # 10: usage_00422.pdb # # Length: 252 # Identity: 66/252 ( 26.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/252 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/252 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLR-ME 59 usage_00239.pdb 1 ----------------------AEVLVMNAGKPKSAAVGEVKAAVDRLRLAE-LDLKKIG 37 usage_00240.pdb 1 ------------------LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAE-LDLKKIG 41 usage_00395.pdb 1 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 59 usage_00396.pdb 1 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 59 usage_00397.pdb 1 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 59 usage_00398.pdb 1 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 59 usage_00420.pdb 1 -HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 58 usage_00421.pdb 1 -HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 58 usage_00422.pdb 1 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALR-LN 59 e Kpk A gEV d r L usage_00141.pdb 60 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 119 usage_00239.pdb 38 GDYIPGDWTY-DTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS 96 usage_00240.pdb 42 GDYIPGDWTY-DTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS 100 usage_00395.pdb 60 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 119 usage_00396.pdb 60 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 119 usage_00397.pdb 60 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 119 usage_00398.pdb 60 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 119 usage_00420.pdb 59 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 118 usage_00421.pdb 59 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 118 usage_00422.pdb 60 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 119 G Gd lV REPlGvV AI PFNYP A KI GN vv KP usage_00141.pdb 120 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 179 usage_00239.pdb 97 ISDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIVADDRVAAVSFTGSTEVGERVV 155 usage_00240.pdb 101 ISDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIVADDRVAAVSFTGSTEVGERVV 159 usage_00395.pdb 120 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 179 usage_00396.pdb 120 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 179 usage_00397.pdb 120 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 179 usage_00398.pdb 120 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 179 usage_00420.pdb 119 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 178 usage_00421.pdb 119 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 178 usage_00422.pdb 120 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 179 l v Al dAG P i G V FTG T GER usage_00141.pdb 180 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 239 usage_00239.pdb 156 KVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 215 usage_00240.pdb 160 KVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 219 usage_00395.pdb 180 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 239 usage_00396.pdb 180 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 239 usage_00397.pdb 180 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVAD- 238 usage_00398.pdb 180 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 239 usage_00420.pdb 179 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 238 usage_00421.pdb 179 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 238 usage_00422.pdb 180 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 239 v ELGG DpAIVL DADL L A I G sY GQRC AiK V V usage_00141.pdb 240 LVEKIREKVLAL 251 usage_00239.pdb 216 LVEEVAKRLSSL 227 usage_00240.pdb 220 LVEEVAKRLSS- 230 usage_00395.pdb 240 LVANIKELVEQL 251 usage_00396.pdb 240 LVANIKELVEQL 251 usage_00397.pdb ------------ usage_00398.pdb 240 LVANIKELVEQL 251 usage_00420.pdb 239 LVANIKELVEQL 250 usage_00421.pdb 239 LVANIKELVEQL 250 usage_00422.pdb 240 LVANIKELVEQL 251 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################