################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:24:35 2021 # Report_file: c_1184_5.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00105.pdb # 2: usage_00106.pdb # 3: usage_00107.pdb # 4: usage_00108.pdb # 5: usage_00110.pdb # 6: usage_00499.pdb # 7: usage_00500.pdb # 8: usage_00904.pdb # 9: usage_00907.pdb # 10: usage_00908.pdb # 11: usage_01046.pdb # 12: usage_01047.pdb # 13: usage_01068.pdb # 14: usage_01069.pdb # 15: usage_01816.pdb # 16: usage_01817.pdb # 17: usage_01818.pdb # 18: usage_01819.pdb # 19: usage_02213.pdb # 20: usage_02342.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 57 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 57 ( 61.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 --FVTTLFVN-------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 36 usage_00106.pdb 1 --FVTTLFVN-------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 36 usage_00107.pdb 1 GKFVTTLFVN--------KIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 37 usage_00108.pdb 1 --FVTTLFVNQ-----PQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 38 usage_00110.pdb 1 --FVTTLFVN-------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 36 usage_00499.pdb 1 GKFVTTLFVN-------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 38 usage_00500.pdb 1 --FVTTLFVN-------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 36 usage_00904.pdb 1 GKFVTTLFVNQSSKCRPQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 45 usage_00907.pdb 1 GKFVTTLFVNQSSKCRPQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 45 usage_00908.pdb 1 GKFVTTLFVNQSSKC-PQKIE--GFKRLDCQS-A-FNDY-------NFVFTSFAK-- 43 usage_01046.pdb 1 GKFVTTLFVNQSSKC-PQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 44 usage_01047.pdb 1 GKFVTTLFVNQSSKC-PQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 44 usage_01068.pdb 1 GKFVTTLFVNQSSKC--QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAKKQ 45 usage_01069.pdb 1 GKFVTTLFVNQSSKC-PQKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 44 usage_01816.pdb 1 GKFVTTLFVNQSSKC-----E--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 40 usage_01817.pdb 1 --FVTTLFVNQ------QKIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 37 usage_01818.pdb 1 GKFVTTLFVN---------IE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 36 usage_01819.pdb 1 GKFVTTLFVNQSSKC----IE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 41 usage_02213.pdb 1 ---------------------GYDAKVLISNDTDLPES-FKRFTVKPYQSIVYHLAK 35 usage_02342.pdb 1 GKFVTTLFVNQSSKCR--KIE--GFKRLDCQS-AMFNDY-------NFVFTSFAK-- 43 gfKrLdcqs a fnd nfvftsfak #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################