################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:01 2021 # Report_file: c_0545_128.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00440.pdb # 2: usage_00687.pdb # 3: usage_00688.pdb # # Length: 120 # Identity: 108/120 ( 90.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/120 ( 90.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/120 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00440.pdb 1 -KNIYLLAKSYFDCKEFERAAYTLQNCKSSKSIFLRLYSKYLAGEKKSE-----NREFYY 54 usage_00687.pdb 1 EKNIYLLAKSYFDCKEFERAAYTLQNCKSSKSIFLRLYSKYLAG-----TLSSTNREFYY 55 usage_00688.pdb 1 EKNIYLLAKSYFDCKEFERAAYTLQNCKSSKSIFLRLYSKYLAGEKKSE-----NREFYY 55 KNIYLLAKSYFDCKEFERAAYTLQNCKSSKSIFLRLYSKYLAG NREFYY usage_00440.pdb 55 ISEVLESLHYQGNKDPYLLYLSGVVYRKRKQDSKAIDFLKSCVLKAPFFWSAWLELSLS- 113 usage_00687.pdb 56 ISEVLESLHYQGNKDPYLLYLSGVVYRKRKQDSKAIDFLKSCVLKAPFFWSAWLELSLSI 115 usage_00688.pdb 56 ISEVLESLHYQGNKDPYLLYLSGVVYRKRKQDSKAIDFLKSCVLKAPFFWSAWLELSLSI 115 ISEVLESLHYQGNKDPYLLYLSGVVYRKRKQDSKAIDFLKSCVLKAPFFWSAWLELSLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################