################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:24 2021 # Report_file: c_0658_55.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00248.pdb # 2: usage_00762.pdb # 3: usage_00763.pdb # 4: usage_00889.pdb # 5: usage_00890.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 72 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 72 ( 55.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00248.pdb 1 FREVTVKGIDASDYQTVQIFYPSKDGTK--IPMFIVHKKGIKLD---------------- 42 usage_00762.pdb 1 --------------GWDVTAF--GRNNFAAHGLTLFTLRNGSAKGP-YVKCYAEKI-HVR 42 usage_00763.pdb 1 --------------GWDVTAF--GRNNFAAHGLTLFTLRNGSAKGP-YVKCYAEKI-HVR 42 usage_00889.pdb 1 --------------GWDVTAF--GRNNFAAHGLTLFTLRNGSAKGMPYVKCYAEKIMHVR 44 usage_00890.pdb 1 --------------GWDVTAF--GRNNFAAHGLTLFTLRNGSAKGMPYVKCYAEKIMHVR 44 gwdvtaf grnnf hgltlftlrngsak usage_00248.pdb 43 GSHPAF--L-YG 51 usage_00762.pdb 43 DAQVTPHFH-WR 53 usage_00763.pdb 43 DAQVTPHFH-WR 53 usage_00889.pdb 45 DAQVTPMHFHWR 56 usage_00890.pdb 45 DAQVTP------ 50 daqvtp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################