################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:34 2021 # Report_file: c_1464_9.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00938.pdb # 2: usage_00939.pdb # 3: usage_00940.pdb # 4: usage_00941.pdb # 5: usage_00942.pdb # 6: usage_00943.pdb # 7: usage_00944.pdb # 8: usage_01005.pdb # 9: usage_01484.pdb # 10: usage_01533.pdb # 11: usage_01534.pdb # 12: usage_01535.pdb # 13: usage_01536.pdb # 14: usage_01537.pdb # 15: usage_01538.pdb # 16: usage_01539.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 44 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 44 ( 65.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00938.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00939.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00940.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00941.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00942.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00943.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_00944.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01005.pdb 1 TA------------KDILFDAE--ARTKLKVGVDKLANAVKVTL 30 usage_01484.pdb 1 --GDFVIRLAESVRGEILRTV-SESFD---DMVAA--------- 29 usage_01533.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01534.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01535.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01536.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01537.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01538.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 usage_01539.pdb 1 AA------------KDVKFGND--ARVKMLRGVNVLADAVKVTL 30 kd f ar gV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################