################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:53:44 2021 # Report_file: c_0874_22.html ################################################################################################ #==================================== # Aligned_structures: 2 # 1: usage_00130.pdb # 2: usage_00170.pdb # # Length: 135 # Identity: 93/135 ( 68.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/135 ( 68.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/135 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00130.pdb 1 SPIVQQFRIYSNELIKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQ 60 usage_00170.pdb 1 ---VQQFRIYSNELIKHDRHERIVKLSRDITIESKRIIFLLHSI-NKE----KVLEEARQ 52 VQQFRIYSNELIKHDRHERIVKLSRDITIESKRIIFLLHSI KVLEEARQ usage_00130.pdb 61 RLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIQAYTYEYLCHEDAEGENETKS-- 118 usage_00170.pdb 53 RLNKLIA-VNFRAVALE-L--VYQFRSSYSPGLQEFIEAYTYEYLCHE----------TK 98 RLNKLIA VYQFRSSYSPGLQEFI AYTYEYLCHE usage_00130.pdb 119 -VSDWQAIQAVQ--- 129 usage_00170.pdb 99 SVSDWQAIQAVQYVE 113 VSDWQAIQAVQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################