################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:30 2021 # Report_file: c_0328_18.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00083.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00147.pdb # 5: usage_00148.pdb # 6: usage_00168.pdb # 7: usage_00169.pdb # 8: usage_00489.pdb # 9: usage_00498.pdb # 10: usage_00592.pdb # 11: usage_00593.pdb # 12: usage_00610.pdb # # Length: 204 # Identity: 84/204 ( 41.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/204 ( 56.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/204 ( 43.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 -------------------------------------------------------PDVQC 5 usage_00085.pdb 1 -------------------------------------------------------PDVQC 5 usage_00086.pdb 1 -------------------------------------------------------PDVQC 5 usage_00147.pdb 1 -------------------------------------------------------PDVQC 5 usage_00148.pdb 1 QRQACEILRDWLRYTPAYAHLVTPRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQC 60 usage_00168.pdb 1 -------------------------------------------------------PDVQC 5 usage_00169.pdb 1 -------------------------------------------------------PDVQC 5 usage_00489.pdb 1 --------------------------------------------------------DLQT 4 usage_00498.pdb 1 -------------------------------------------------------PDVQC 5 usage_00592.pdb 1 -------------------------------------------------------PDVQC 5 usage_00593.pdb 1 -------------------------------------------------------PDVQC 5 usage_00610.pdb 1 ------------------------------------------------------DPDVQC 6 DvQc usage_00083.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00085.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00086.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00147.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00148.pdb 61 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 120 usage_00168.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00169.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00489.pdb 5 GLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQ 64 usage_00498.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00592.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00593.pdb 6 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 65 usage_00610.pdb 7 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 66 GLGVLFnLSGEydkAvDcFtAALsVRPnDYlLWNkLGATLANGnqSEEAVaAYrRALElQ usage_00083.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS 125 usage_00085.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS 125 usage_00086.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS 125 usage_00147.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS------GGAMSENIWSTLRLALS 119 usage_00148.pdb 121 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS-------GAMSENIWSTLRLALS 173 usage_00168.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS-----EGGAMSENIWSTLRLALS 120 usage_00169.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS------GGAMSENIWSTLRLALS 119 usage_00489.pdb 65 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRK-----------SGNIWAALRIALS 113 usage_00498.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS-R-RGEGGAMSENIWSTLRLALS 123 usage_00592.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS---RGEGGAMSENIWSTLRLALS 122 usage_00593.pdb 66 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS---RGEGGAMSENIWSTLRLALS 122 usage_00610.pdb 67 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS 126 PGyIRSRYNLGISCINLGAhREAVehFLeALnmQRK SeNIWstLRlALS usage_00083.pdb 126 MLGQSDAYGAADARDLSTLLTMF- 148 usage_00085.pdb 126 MLGQSDAYGAADARDLSTLLTMF- 148 usage_00086.pdb 126 MLGQSDAYGAADARDLSTLLTMFG 149 usage_00147.pdb 120 MLGQSDAYGAADARDLSTLLTMFG 143 usage_00148.pdb 174 MLG--------------------- 176 usage_00168.pdb 121 MLGQSDAYGAADARDLSTLLTMF- 143 usage_00169.pdb 120 MLGQSDAYGAADARDLSTLLTMF- 142 usage_00489.pdb 114 LMDQPELFQAANLGDLDVLLRA-- 135 usage_00498.pdb 124 MLGQSDAYGAADARDLSTLLTMF- 146 usage_00592.pdb 123 MLGQSDAYGAADARDLSTLLTMF- 145 usage_00593.pdb 123 MLGQSDAYGAADARDLSTLLTMF- 145 usage_00610.pdb 127 MLGQSDAYGAADARDLSTLLTMF- 149 mlg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################