################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:29 2021 # Report_file: c_0404_34.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00006.pdb # 2: usage_00064.pdb # 3: usage_00080.pdb # 4: usage_00108.pdb # 5: usage_00119.pdb # 6: usage_00196.pdb # 7: usage_00261.pdb # # Length: 113 # Identity: 7/113 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/113 ( 14.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/113 ( 49.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 RKPSLLAHP--GPLVKSEETVILQCWSD-V---MFEHFLLHREG--MFND---TL-RLI- 47 usage_00064.pdb 1 EKPSLSAQP--GPTVLAGESVTLSCSSR-S---SYDMYHLSREGEA---H---EC-RFSA 47 usage_00080.pdb 1 ---SFLALP--GHLVKSEETVILQCWSD-V---MFEHFLLHREG--KFNN---TL-HLI- 44 usage_00108.pdb 1 -KAVVFLEPQ-WYSVLEKDSVTLKCQGA-YSPED-NSTQWFHNES----L-------IS- 44 usage_00119.pdb 1 ---FLSADR--GLVLMPGENISLTCSSAHI---PFDRFSLAKEGEL---S--LPQHQSG- 46 usage_00196.pdb 1 -RPSLVALP-G-------ANVSLRCAGR-L---RNMSFVLYREGVA---A--PLQ-YRH- 40 usage_00261.pdb 1 -KPTLSALP--SPLVTSGKSVTLLCQSR-S---PMDTFLLCKERAA---HPLLCL-RSE- 48 a p v L C l e usage_00006.pdb 48 GEH-HDGVSKANFSISRMTQDLAGTYRCYGSVTHS-PYQV-SAPSDPLDIV-- 95 usage_00064.pdb 48 GPK-VNGTFQADFPLGPATH--GGTYRCFGSFRDS-PYEW-SNSSDPLLVS-- 93 usage_00080.pdb 45 GEH-HDGVSKANFSIGPMMPVLAGTYRCYGSVPHS-PYQL-SAPSDPLDMVI- 93 usage_00108.pdb 45 SQA-------SSYFIDAATVNDSGEYRCQT---------NLSTLSDPVQLE-- 79 usage_00119.pdb 47 E-------HPANFSLGPVDLNVSGIYRCYGWYNRS-PYLW-SFPSNALELVVT 90 usage_00196.pdb 41 SAQ-----PWADFTLL--GARAPGTYSCYYHTPSAP-YVL-SQRSEVLVI--- 81 usage_00261.pdb 49 HGAQ-Q--HQAEFPMSPVTSVHGGTYRCFSSHGFS-HYLL-SHPSDPLEL--- 93 a f G YrC S S l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################