################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:14 2021 # Report_file: c_0707_87.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00114.pdb # 2: usage_00115.pdb # 3: usage_00359.pdb # 4: usage_00408.pdb # 5: usage_00743.pdb # # Length: 48 # Identity: 7/ 48 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 48 ( 35.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 48 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 -NLVLFDRDDRVWSTNTAG-KGTGCRAVLQPNGRMDVLTNQNIAVWTS 46 usage_00115.pdb 1 -NLVLFDRDDRVWSTNTAG-KGTGCRAVLQPNGRMDVLTNQNIAVWTS 46 usage_00359.pdb 1 CNLVLYDVDKPIWATNTGG-LSRSCFLSMQTDGNLVVYNPSNKPIWAS 47 usage_00408.pdb 1 --LVLYDHSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWAS 46 usage_00743.pdb 1 -LVAYGPNGAATWNAGTQG-KGA-VRAVFQGDGNLVVYGAGNAVLWHS 45 lvl d W nT g c av Q G V n W S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################