################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:34 2021 # Report_file: c_0677_109.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00177.pdb # 2: usage_00178.pdb # 3: usage_00179.pdb # 4: usage_00751.pdb # 5: usage_00822.pdb # 6: usage_00823.pdb # 7: usage_00993.pdb # 8: usage_01298.pdb # 9: usage_01308.pdb # # Length: 84 # Identity: 9/ 84 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 84 ( 20.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 84 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 LTFMTRYLHGDHVRLAGV-T--DDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWG 57 usage_00178.pdb 1 LTFMTRYLHGDHVRLAGV-T--DDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWG 57 usage_00179.pdb 1 LSFMSRYVSGDNVARG-A---ANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFA 56 usage_00751.pdb 1 LSFMSRYVSGDNVARG-A---ANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFA 56 usage_00822.pdb 1 LTLMNRYISGSNVHTA-T-V--SDGKEWGRESEVAYTVQSGTLKNLNLKWRNSTMRRDFS 56 usage_00823.pdb 1 -TLMNRYISGSNVHTA-T-V--SDGKEWGRESEVAYTVQSGTLKNLNLKWRNSTMRRDFS 55 usage_00993.pdb 1 LNWTTAFVYGWDIKVRNV-T--DDAQEREFFNQVKYTVQSGFAKDASLRIRNSYYRASD- 56 usage_01298.pdb 1 LTFMTRYLHGDHVRLAGV-T--DDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDW- 56 usage_01308.pdb 1 LSLMTRYFSGHGAKPK-GADG---SREWERDSDLRYVLQGGALKGLGLVWRNATYRSAFS 56 m ry G Ew r Y QsG K l wRN R usage_00177.pdb 58 -------SNTRFDENRLIVSYPLS 74 usage_00178.pdb 58 --------RFDENRLIVSYPLS-- 71 usage_00179.pdb 57 -------NDLDENRLILSYSLA-- 71 usage_00751.pdb 57 -------NDLDENRLILSYSLA-- 71 usage_00822.pdb 57 -------NN-EFDENRLIISYPLS 72 usage_00823.pdb 56 -------NN-EFDENRLIISYPLS 71 usage_00993.pdb 57 AYQGAYIGDTNEWRIFLDIPVK-- 78 usage_01298.pdb 57 --------RFDENRLIVSYPLS-- 70 usage_01308.pdb 57 -------RDIDENRLYLTYELP-- 71 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################