################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:02 2021 # Report_file: c_0382_66.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00077.pdb # 2: usage_00338.pdb # 3: usage_00378.pdb # 4: usage_00379.pdb # 5: usage_00380.pdb # 6: usage_00381.pdb # 7: usage_00705.pdb # 8: usage_00806.pdb # 9: usage_00834.pdb # 10: usage_00835.pdb # # Length: 78 # Identity: 55/ 78 ( 70.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 78 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 78 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 --VQTAATSWGTVPSIRVYTANNGKITERCWDGKGWYTGAFNEPGDNVSVTSWLVGSAIH 58 usage_00338.pdb 1 SSVQTAATSWGTVPSIRVYTANNGKITERCWDGKGWYTGAFNEPGDNVSVTSWLVGSAIH 60 usage_00378.pdb 1 -----AAISWGTTPSIRVYTANGNKITERCYDGSNWYTGAFNQAGDNVSATCWLSGSAVH 55 usage_00379.pdb 1 --MQTAAISWGTTPSIRVYTANGNKITERCYDGSNWYTGAFNQAGDNVSATCWLSGSAVH 58 usage_00380.pdb 1 --MQTAAISWGTTPSIRVYTANGNKITERCYDGSNWYTGAFNQAGDNVSATCWLSGSAVH 58 usage_00381.pdb 1 --MQTAAISWGTTPSIRVYTANGNKITERCYDGSNWYTGAFNQAGDNVSATCWLSGSAVH 58 usage_00705.pdb 1 --VQTAATSWGTVPSIRVYTANNGKITERCWDGKGWYTGAFNEPGDNVSVTSWLVGSAIH 58 usage_00806.pdb 1 --MQTAAISWGTTPSIRVYTANGNKITERCYDGSNWYTGAFNQAGDNVSATCWLSGSAVH 58 usage_00834.pdb 1 -SVQTAATSWGTVPSIRVYTANNGKITERCWDGKGWYTGAFNEPGDNVSVTSWLVGSAIH 59 usage_00835.pdb 1 -GDQTAATSWGTVPSIRVYTANNGKITERCWDGKGWYTGAFNEPGDNVSVTSWLVGSAIH 59 AA SWGT PSIRVYTAN KITERC DG WYTGAFN GDNVS T WL GSA H usage_00077.pdb 59 IRVYASTGTTTTEWCWGG 76 usage_00338.pdb 61 IRVYASTGTTTTEWCWDG 78 usage_00378.pdb 56 IRVYATSGGSTTEWCWDG 73 usage_00379.pdb 59 IRVYATSGGSTTEWCWDG 76 usage_00380.pdb 59 IRVYATSGGSTTEWCWDG 76 usage_00381.pdb 59 IRVYATSGGSTTEWCWDG 76 usage_00705.pdb 59 IRVYASTGTTTTEWCWDG 76 usage_00806.pdb 59 IRVYATSGGSTTEWCWDG 76 usage_00834.pdb 60 IRVYASTGTTTTEWCWDG 77 usage_00835.pdb 60 IRVYASTGTTTTEWCWDG 77 IRVYA G TTEWCWdG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################