################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:45 2021 # Report_file: c_0982_54.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00405.pdb # 2: usage_00471.pdb # 3: usage_00699.pdb # 4: usage_00957.pdb # 5: usage_01048.pdb # 6: usage_01049.pdb # # Length: 61 # Identity: 12/ 61 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 61 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 61 ( 34.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00405.pdb 1 -------IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT-- 51 usage_00471.pdb 1 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH---- 56 usage_00699.pdb 1 -------LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-----------LL 42 usage_00957.pdb 1 -------IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH---- 49 usage_01048.pdb 1 -------IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD--- 50 usage_01049.pdb 1 -------IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD--- 50 iGkGsFGQVVKAyd vA K n k f qa E usage_00405.pdb - usage_00471.pdb - usage_00699.pdb 43 A 43 usage_00957.pdb - usage_01048.pdb - usage_01049.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################