################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:42 2021 # Report_file: c_1489_24.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00430.pdb # 2: usage_01918.pdb # 3: usage_01919.pdb # 4: usage_02000.pdb # 5: usage_02043.pdb # 6: usage_02044.pdb # 7: usage_02185.pdb # 8: usage_02186.pdb # 9: usage_02275.pdb # 10: usage_04087.pdb # 11: usage_04105.pdb # 12: usage_04106.pdb # 13: usage_04107.pdb # 14: usage_04165.pdb # 15: usage_04225.pdb # # Length: 45 # Identity: 13/ 45 ( 28.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 45 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 45 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00430.pdb 1 TEEVFREYIRDPKAKIPGTKMIFAGVKDEQKVSDLIAYIKQFN-- 43 usage_01918.pdb 1 -EDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 44 usage_01919.pdb 1 -EDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 44 usage_02000.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_02043.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_02044.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_02185.pdb 1 TPDVLDVYLENP-KFMPGTKMSFAGMKKPQERADVIAYLE----- 39 usage_02186.pdb 1 TPDVLDVYLENP-KFMPGTKMSFAGMKKPQERADVIAYLE----- 39 usage_02275.pdb 1 NNDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 42 usage_04087.pdb 1 -EDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 44 usage_04105.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_04106.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_04107.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_04165.pdb 1 GEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 45 usage_04225.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 l YlenP k PGTKM F G Kk er D iAYl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################