################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:13 2021 # Report_file: c_1420_116.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00174.pdb # 2: usage_01126.pdb # 3: usage_01127.pdb # # Length: 65 # Identity: 2/ 65 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 65 ( 58.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 65 ( 41.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 VLKLVEARPMIHELL-----------------TEGRRS----KTNKAKTLATWATKELRK 39 usage_01126.pdb 1 PLFLL--LHYLIKADKPNCILLLKLPGLEKLLHHVT--KYYKYSKEKTLKWLEKKVNQTV 56 usage_01127.pdb 1 PLFLL--LHYLIKADKPNCILLLKLPGLEKLLHHVT--KYYKYSKEKTLKWLEKKVNQTV 56 pLfLl lhylikad hhvt yskektlkwlekkvnqtv usage_00174.pdb 40 LKN-- 42 usage_01126.pdb 57 AALKT 61 usage_01127.pdb 57 AALKT 61 aal #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################