################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:24:34 2021 # Report_file: c_1102_8.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00039.pdb # 5: usage_00041.pdb # 6: usage_00067.pdb # 7: usage_00069.pdb # 8: usage_00080.pdb # 9: usage_00081.pdb # 10: usage_00082.pdb # 11: usage_00084.pdb # 12: usage_00085.pdb # 13: usage_00086.pdb # 14: usage_00103.pdb # 15: usage_00105.pdb # 16: usage_00107.pdb # 17: usage_00110.pdb # 18: usage_00134.pdb # 19: usage_00136.pdb # 20: usage_00138.pdb # # Length: 107 # Identity: 62/107 ( 57.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/107 ( 57.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/107 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------------GGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 43 usage_00003.pdb 1 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00005.pdb 1 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00039.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00041.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00067.pdb 1 MGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGG 60 usage_00069.pdb 1 MGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGG 60 usage_00080.pdb 1 -FRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 59 usage_00081.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00082.pdb 1 ---------------------SAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 39 usage_00084.pdb 1 ---------------------SAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 39 usage_00085.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00086.pdb 1 ---------------------SAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 39 usage_00103.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPALGIGFAGVALAWGLTVLTMAFAVGHISGG 60 usage_00105.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPALGIGFAGVALAWGLTVLTMAFAVGHISGG 60 usage_00107.pdb 1 ---------------------SAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 39 usage_00110.pdb 1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAWGLTVLTMAFAVGHISGG 60 usage_00134.pdb 1 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00136.pdb 1 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 usage_00138.pdb 1 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60 SAV AA FP LGIGF GVALA GLTVLTMA AVG ISGG usage_00001.pdb 44 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 87 usage_00003.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 105 usage_00005.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 usage_00039.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 usage_00041.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKT 107 usage_00067.pdb 61 HFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATG-- 105 usage_00069.pdb 61 HFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKA 107 usage_00080.pdb 60 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKT 106 usage_00081.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 105 usage_00082.pdb 40 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 84 usage_00084.pdb 40 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKT 86 usage_00085.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 105 usage_00086.pdb 40 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 84 usage_00103.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 usage_00105.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 usage_00107.pdb 40 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKT 86 usage_00110.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 usage_00134.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGK- 106 usage_00136.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASG-- 105 usage_00138.pdb 61 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS--- 104 HFNPAV GL GRFPA V YVIAQV G IVAAA LY IA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################