################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:43 2021 # Report_file: c_0777_132.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00125.pdb # 2: usage_00126.pdb # 3: usage_00635.pdb # 4: usage_00669.pdb # 5: usage_01122.pdb # 6: usage_01123.pdb # 7: usage_01433.pdb # 8: usage_01434.pdb # # Length: 118 # Identity: 0/118 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/118 ( 7.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 68/118 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 ---------------------LSFFFSNGMD-PEYSVLGRVARRIWAVTMRDKYGA-NDR 37 usage_00126.pdb 1 ---------------------LSFFFSNGMD-PEYSVLGRVARRIWAVTMRDKYGA-NDR 37 usage_00635.pdb 1 IGGWTYSPNFAPAASTDAGR------------KNFAKTAVKLLQDLG------------- 35 usage_00669.pdb 1 ---------------------LSFFWGIGMNFYMEIAKMRAGRRLWAHLIEKMFQPKNSK 39 usage_01122.pdb 1 ---------------------LAFFFVSQGDFFEEVAKFRALRRCYAKIMKERFGARNPE 39 usage_01123.pdb 1 ---------------------LAFFFVSQGDFFEEVAKFRALRRCYAKIMKERFGARNPE 39 usage_01433.pdb 1 ---------------------LSFFWGIGMNFFMEVAKLRAARMLWAKLVHQ-FGPKNPK 38 usage_01434.pdb 1 --------------------TINFRVTATHDQFLTIARLRALREAWARIGEV-FGV-DED 38 r r a usage_00125.pdb 38 SQKLKYHIQTSGRSLHAQEIDFNDIRTTLQALIAIYDN--------CNSLH----T-- 81 usage_00126.pdb 38 SQKLKYHIQTSGRSLHAQEIDFNDIRTTLQALIAIYDN--------CNSLH----T-- 81 usage_00635.pdb 36 FDGLDIDWEYPE-------NDQQANDFVLLLKEVRTALDSYSAANAGG-QHFLLT--- 82 usage_00669.pdb 40 SLLLRAHCQTSGWSLTEQDPYNNIVRTAIEAMAAVFGG--------TQSLH----TNS 85 usage_01122.pdb 40 SMRLRFHCQTAAATLTKPQYMVNVVRTSLQALSAVLGG--------AQSLH----TN- 84 usage_01123.pdb 40 SMRLRFHCQTAAATLTKPQYMVNVVRTSLQALSAVLGG--------AQSLH----TN- 84 usage_01433.pdb 39 SMSLRTHSQTSGWSLTAQDVYNNVVRTCIEAMAATQGH--------TQSLH----TNS 84 usage_01434.pdb 39 KRGARQNAITSWRELTREDPYVNILRGSIATFSASVGG--------AESIT----T-- 82 l t n r a h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################