################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:47 2021 # Report_file: c_1484_508.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00178.pdb # 2: usage_00351.pdb # 3: usage_02832.pdb # 4: usage_03634.pdb # 5: usage_03635.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 47 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 47 ( 70.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 -YLLQRMEEFI-----GTVRGK-AMKKWVESITKIIQRKK------- 33 usage_00351.pdb 1 ----PLLAGQLGVEF----------------FDEKLNSLCMAWLVD- 26 usage_02832.pdb 1 ELIGKHAIPNL----------SEDTVISILNTINEVIA--------- 28 usage_03634.pdb 1 ----LPMMNEV-I--G--------NPLLDKFMKDLIIRILAMVSEQE 32 usage_03635.pdb 1 ----LPMMNEV-I--G--------NPLLDKFMKDLIIRILAMVSEQE 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################