################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:14 2021 # Report_file: c_0707_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00386.pdb # 2: usage_00387.pdb # 3: usage_00388.pdb # 4: usage_00404.pdb # 5: usage_00832.pdb # # Length: 73 # Identity: 0/ 73 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 73 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 73 ( 53.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00386.pdb 1 HLVIETGKI-DAGYHGNL---GINIKNDHEDDKMQTIFLRNI---DNEKIFE----KERH 49 usage_00387.pdb 1 HLVIETGKI-DAGIHGNL---GINIKNDHEDDKMQTIFLRNI---DNEKIFE----KERH 49 usage_00388.pdb 1 -LVIETGKI-AAGYHGNL---GINIKNDHEDDKMQTIFLRNI---CNEKIFE----KERH 48 usage_00404.pdb 1 --KTYTVGSV----------EFTMK--GIAAVNAQ--L-GHN---D------YSI-NQPH 33 usage_00832.pdb 1 --FLVKFWA-DLN-----TNYGVSSQYES---PENMII-TCSTKVC---------VETEY 39 t g q h usage_00386.pdb 50 LYKL--GSYRIE- 59 usage_00387.pdb 50 LYKL--GSYRIEK 60 usage_00388.pdb 49 LYKL--GSYRIE- 58 usage_00404.pdb 34 TVSLS-AYLIG-- 43 usage_00832.pdb 40 ARYENGHYLYR-- 50 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################