################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:07 2021 # Report_file: c_1160_119.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00154.pdb # 4: usage_00232.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00618.pdb # 8: usage_00856.pdb # 9: usage_00857.pdb # 10: usage_00905.pdb # 11: usage_00906.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 48 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 48 ( 85.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 YVMPV------PMMNV-INGGKHAGN------DLDLQEFMIMP----- 30 usage_00041.pdb 1 YVMPV------PMMNV-INGGKHAGN------DLDLQEFMIMP----- 30 usage_00154.pdb 1 ---------------RVLPLRGE-GTWQEYVKTSADFVVPIP------ 26 usage_00232.pdb 1 HVLPV------PMMNI-MNGGQHA-----------FQEFMIMPVG--- 27 usage_00234.pdb 1 HVLPV------PMMNI-MNGGQHATN------STDFQEFMIMP----- 30 usage_00235.pdb 1 TVSVHYTGWLTDGQKF-GSSK--------------DRNPFAFV----- 28 usage_00618.pdb 1 --IPV------ISMG--A------------------GGFHISF-PIQQ 19 usage_00856.pdb 1 NRLPV------PMMNI-LNGGAHAAN------TVDVQEFMIMP----- 30 usage_00857.pdb 1 NRLPV------PMMNI-LNGGAHAAN------TVDVQEFMIMP----- 30 usage_00905.pdb 1 KVLPT------PMMNI-INGGSHSDA------PIAFQEFMIMP----- 30 usage_00906.pdb 1 KVLPT------PMMNI-INGGSHSDA------PIAFQEFMIMP----- 30 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################