################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:10 2021 # Report_file: c_1195_66.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00029.pdb # 2: usage_00215.pdb # 3: usage_00220.pdb # 4: usage_00249.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 41 ( 7.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 41 ( 51.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 G---SMPTTASWSYTGSN--L-----RAD-VA--YDLFTAS 28 usage_00215.pdb 1 -------RVFVHYTGWLLDGT-----KFDSSLDRKDKFSFD 29 usage_00220.pdb 1 SSMP---TTASWSYSGSN--I-----RAN-VA--YDLFTAA 28 usage_00249.pdb 1 ----ATMYEFKLQSFS-----AASASEFS-AL--KQGRTQ- 28 d ft #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################