################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:50 2021 # Report_file: c_1252_103.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00778.pdb # 4: usage_00790.pdb # 5: usage_01266.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 47 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 47 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 VMAALLTPFDQQQ----AL-DKASLRRLVQFNIQQGIDG---LYV-G 38 usage_00006.pdb 1 -KPVIVTGSQI--PLADLRSDGQANLLNALHVAANYPINE--VTLFF 42 usage_00778.pdb 1 -IPIVLTGS-L--PITEKNSDAPFNLRTALEFVKLGIRG---IYIAF 40 usage_00790.pdb 1 -IPIVLTGSML--PITEKNSDAPFNLRTALEFVKLGIRG---IYIAF 41 usage_01266.pdb 1 -KPIVVVGSMR--PGTAMSADGMLNLYNAVAVASNKDSRGKGVLVTM 44 p tgs D nl a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################