################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:22 2021 # Report_file: c_1193_88.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00129.pdb # 2: usage_00411.pdb # 3: usage_00859.pdb # 4: usage_00907.pdb # 5: usage_00908.pdb # 6: usage_00919.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 42 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 42 ( 73.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 -----VKIVTVKTKAYPDQKPGTSG---------LRKR---- 24 usage_00411.pdb 1 ------TSYWANILVVK-DPA----AP-ENEGKVFKYRF--- 27 usage_00859.pdb 1 SHSVFSVTIHMKETTI--------------DGEELVKIGKLN 28 usage_00907.pdb 1 -----KTSYWANILVVK-DPQ----AP-DNEGKVFKYRFG-- 29 usage_00908.pdb 1 ------TSYWANILVVK-DPQ----AP-DNEGKVFKYRFG-- 28 usage_00919.pdb 1 ------NINFAVY---F-YSL----GDEKNDVKGKVYNIR-- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################