################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:02 2021 # Report_file: c_0888_69.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00119.pdb # 2: usage_00213.pdb # 3: usage_00214.pdb # 4: usage_00215.pdb # 5: usage_00279.pdb # 6: usage_00352.pdb # 7: usage_00708.pdb # 8: usage_00805.pdb # 9: usage_00823.pdb # # Length: 102 # Identity: 55/102 ( 53.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/102 ( 65.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/102 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 SPADIVKNLKESMAVLEKQDI--SDKKAEKATEEVSKNLVAMKEILYGTNEKEP--QTEA 56 usage_00213.pdb 1 APADIVKNLKDNMTILEK------DKKAEKASEEVSKSLLSMKEILYG---------TEA 45 usage_00214.pdb 1 APADIVKNLKDNMTILEK--S---DKKAEKASEEVSKSLLSMKEILY---------QTEA 46 usage_00215.pdb 1 -PADIVKNLKDNMTILEK--S---DKKAEKASEEVSKSLLSMKEILYG-----P--QTEA 47 usage_00279.pdb 1 --ADIVKNLKESA-VLEK--Q-----KAEKATEEVSKNLVAK-EILY------GTNTEAV 43 usage_00352.pdb 1 --AEIVKILKDNLAILEK--Q---DKKTDKASEEVSKSLQAMKEILC------P--PTEA 45 usage_00708.pdb 1 ---DIVKNLKESMAVLEK--QDISDKKAEKATEEVSKNLVAMKEILYGN-EKEP--QTEA 52 usage_00805.pdb 1 SPADIVKNLKESA-VLEK-----SDKKAEKATEEVSKNLVAK-EILY---------QTEA 44 usage_00823.pdb 1 -PADIVKNLKESMAVLE--------KKAEKATEEVSKNLVAMKEILYG---KEP--QTEA 46 dIVKnLK LE KaeKA EEVSK L EILy tea usage_00119.pdb 57 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRR 98 usage_00213.pdb 46 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNDILRR 87 usage_00214.pdb 47 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNDILRR 88 usage_00215.pdb 48 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNDILRR 89 usage_00279.pdb 44 -AQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRR 84 usage_00352.pdb 46 VAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRR 87 usage_00708.pdb 53 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRR 94 usage_00805.pdb 45 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRR 86 usage_00823.pdb 47 VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRR 88 AQLAQELYnSGLLsTLvADLQLIDFEGKKDVaQIFN ILRR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################