################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:39 2021 # Report_file: c_1337_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00217.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00440.pdb # 6: usage_00441.pdb # 7: usage_00741.pdb # 8: usage_01037.pdb # 9: usage_01278.pdb # # Length: 64 # Identity: 2/ 64 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 64 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 64 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 -STEGSERLIRRTIQYALEHGKPSVSLV-HKGNIMKFT---------EGGFRDWGYALAE 49 usage_00218.pdb 1 -STEGSERLIRRTIQYALEHGKPSVSLV-HKGNIMKFT---------EGGFRDWGYALAE 49 usage_00219.pdb 1 -STEGSERLIRRTIQYALEHGKPSVSLV-HKGNIMKFT---------EGGFRDWGYALAE 49 usage_00220.pdb 1 -STEGSERLIRRTIQYALEHGKPSVSLV-HKGNIMKFT---------EGGFRDWGYALAE 49 usage_00440.pdb 1 -SEEGTSRLVRAAIDYAIEHGRKSVTLV-HKGNIMKFT---------EGAFKNWGYELAE 49 usage_00441.pdb 1 -SEEGTSRLVRAAIDYAIEHGRKSVTLV-HKGNIMKFT---------EGAFKNWGYELAE 49 usage_00741.pdb 1 --RFATRRLMERALEWALRNGNTVVTIM-HKGNIMKYT---------EGAFMRWAYEVAL 48 usage_01037.pdb 1 SAREAVKQAAKIIYLAHEDNKEKDFELEISW--CS-LSETNGLHKFVKGDLLQEAIDFAQ 57 usage_01278.pdb 1 -SRFATRRLMERALEWALRNGNTVVTIM-HKGNIMKYT---------EGAFMRWAYEVAL 49 rl a g v hk im t eG f w y A usage_00217.pdb 50 REFA 53 usage_00218.pdb 50 REFA 53 usage_00219.pdb 50 REFA 53 usage_00220.pdb 50 REFA 53 usage_00440.pdb 50 KEYG 53 usage_00441.pdb 50 KEYG 53 usage_00741.pdb 49 EKFR 52 usage_01037.pdb 58 KEIN 61 usage_01278.pdb 50 E--- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################