################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:03 2021 # Report_file: c_1387_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00294.pdb # 2: usage_01571.pdb # 3: usage_01572.pdb # 4: usage_01945.pdb # 5: usage_02271.pdb # 6: usage_02568.pdb # # Length: 99 # Identity: 15/ 99 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 99 ( 71.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 99 ( 28.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00294.pdb 1 APEEVKPLLVKVSLAVAGFIAIIVVMNLVGW-NSLPAYINLLTIVAIAIPVFYFAWMIS- 58 usage_01571.pdb 1 APEEVKPLLVKVSLAVAGFIAIIVVMNLVGW-NSLPAYINLLTIVAIAIPVFYFAWMI-- 57 usage_01572.pdb 1 -----KPLLVKVSLAVAGFIAIIVVMNLVGW-NSLPAYINLLTIVAIAIPVFYFAWMISH 54 usage_01945.pdb 1 -----KPLLVKVSLAVAGFIAIIVVMNLVGW-NSLPAYINLLTIVAIAIPVFYFAWMIS- 53 usage_02271.pdb 1 APEEVKPLLVKVSLAVAGFIAIIVVMNLVGW-NSLPAYINLLTIVAIAIPVFYFA----- 54 usage_02568.pdb 1 NKKSLAIVLALAALSVVASAII---------LE-YEDVARVFVYAAGVAVLGIFFHL--- 47 kplLvkvsLaVagfiaI n lpayinlltivAiaipvfyFa usage_00294.pdb 59 STSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAA- 96 usage_01571.pdb 58 -TSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAA- 94 usage_01572.pdb 55 ------LRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAE 87 usage_01945.pdb 54 ------LRVVSYIPLFIAAVLFWAIEEQGSVVLATFAA- 85 usage_02271.pdb 55 ------LRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAE 87 usage_02568.pdb 48 ----ERAGLIAALILTVQTVFFFIFYQQMSTSLALFALR 82 lrvvsyipLfiaaVlFwaieeQgSvvLAtFAa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################