################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:09 2021 # Report_file: c_0592_38.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00216.pdb # 2: usage_00223.pdb # 3: usage_00442.pdb # 4: usage_00443.pdb # # Length: 72 # Identity: 23/ 72 ( 31.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 72 ( 77.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 72 ( 4.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 -DLTIGSIDDLRLERWQKDRDIFVKKAESLGAKVLVQSANGDDSAQISQIEN-LNKNVDV 58 usage_00223.pdb 1 GSVG-IAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKV 59 usage_00442.pdb 1 VKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 59 usage_00443.pdb 1 VKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 59 g aiddlrleRWqkDrdifVKkaeslGaKv vQsAng Q SQIEN n gVdV usage_00216.pdb 59 LVIIPHNGDVLS 70 usage_00223.pdb 60 LVIASIDGTTLS 71 usage_00442.pdb 60 LVIIPYNGQVLS 71 usage_00443.pdb 60 LVIIPYNGQVLS 71 LVIip nG vLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################