################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:40:11 2021 # Report_file: c_1402_107.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00063.pdb # 2: usage_00128.pdb # 3: usage_00141.pdb # 4: usage_00251.pdb # 5: usage_00262.pdb # 6: usage_00577.pdb # 7: usage_00617.pdb # 8: usage_00628.pdb # 9: usage_00629.pdb # 10: usage_00638.pdb # 11: usage_00711.pdb # 12: usage_00726.pdb # 13: usage_00727.pdb # 14: usage_00762.pdb # 15: usage_00790.pdb # 16: usage_00793.pdb # 17: usage_00796.pdb # 18: usage_00800.pdb # 19: usage_00818.pdb # 20: usage_00832.pdb # 21: usage_00833.pdb # 22: usage_00854.pdb # 23: usage_00855.pdb # 24: usage_00861.pdb # 25: usage_00871.pdb # 26: usage_00905.pdb # 27: usage_00925.pdb # # Length: 42 # Identity: 3/ 42 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 42 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 42 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00128.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00141.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00251.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 36 usage_00262.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00577.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 36 usage_00617.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00628.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00629.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGL----- 34 usage_00638.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 35 usage_00711.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00726.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00727.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 36 usage_00762.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00790.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00793.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 35 usage_00796.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00800.pdb 1 GTWDEVARHNQLFRAISLRVRA------DGYFVELLDNLQYR 36 usage_00818.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00832.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR---- 36 usage_00833.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00854.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00855.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00861.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00871.pdb 1 --EDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 37 usage_00905.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 usage_00925.pdb 1 ---DDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRN--- 36 DddvlHylLqlvqavkfep arfllkrgl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################