################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:12 2021 # Report_file: c_1084_88.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00645.pdb # 2: usage_01223.pdb # 3: usage_01300.pdb # 4: usage_01325.pdb # 5: usage_01350.pdb # 6: usage_01616.pdb # 7: usage_01617.pdb # 8: usage_01618.pdb # 9: usage_01619.pdb # 10: usage_01833.pdb # # Length: 59 # Identity: 1/ 59 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 59 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 59 ( 50.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00645.pdb 1 TVLGATLDVARQAGFDQLILTLG---GAASA-VRAAALDG---------TDVVVVE--- 43 usage_01223.pdb 1 --VKEKLLAAHQAG-IHKIVLP-K------D-NEAQL--EELPKEVLEGLEIKL---VE 43 usage_01300.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01325.pdb 1 ---REVIARLRRAG-TLTLVTAT--TPEEAR-AVEAA--G---------ADAVI--AQG 39 usage_01350.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01616.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01617.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01618.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01619.pdb 1 --TPETILELQQSG-IEIVMLTGDSKRTAEA-VAGTL--G---------IKKVV--AE- 41 usage_01833.pdb 1 --WPDVISSLQDQG-VTRVCVAGPDSLFGRVGTTT-R--A---------FEVIA---AT 41 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################