################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:22 2021 # Report_file: c_0740_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00256.pdb # 2: usage_00528.pdb # 3: usage_00535.pdb # 4: usage_00544.pdb # 5: usage_00545.pdb # 6: usage_00546.pdb # 7: usage_00547.pdb # 8: usage_00548.pdb # 9: usage_00549.pdb # 10: usage_00550.pdb # 11: usage_00551.pdb # # Length: 116 # Identity: 96/116 ( 82.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/116 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/116 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00256.pdb 1 GVGTDENYPLGTTTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYKK-EA---ASREL 56 usage_00528.pdb 1 GVGTDENYPLG-T--LFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---KEQQASREL 54 usage_00535.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYKKEAE-QQASREL 58 usage_00544.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---K---ASREL 53 usage_00545.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK-------ASREL 52 usage_00546.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---K---ASREL 53 usage_00547.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---KEQQASREL 56 usage_00548.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---K---ASREL 53 usage_00549.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---K---ASREL 53 usage_00550.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---KEQQASREL 56 usage_00551.pdb 1 GVGTDENYPLG-TTKLFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK---K---ASREL 53 GVGTDENYPLG T LFPPIEMISPISKNNEAMTQLKNGTKFVLKLYK ASREL usage_00256.pdb 57 YFEDVKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPNGQ---PILCSIEP 109 usage_00528.pdb 55 YFEDVKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPS-NGQ-PILCSIEP 108 usage_00535.pdb 59 YFEAVKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELID-----R-SPPILCSIEP 108 usage_00544.pdb 54 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 107 usage_00545.pdb 53 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 106 usage_00546.pdb 54 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 107 usage_00547.pdb 57 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 110 usage_00548.pdb 54 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 107 usage_00549.pdb 54 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 107 usage_00550.pdb 57 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 110 usage_00551.pdb 54 YFE-VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELIDRSPSSNGQ-PILCSIEP 107 YFE VKMQMVCRDWGNKFNQKKPPKKIEFLMSWVVELID PILCSIEP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################