################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:04 2021 # Report_file: c_1469_21.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00349.pdb # 2: usage_00508.pdb # 3: usage_00509.pdb # 4: usage_00573.pdb # 5: usage_00574.pdb # 6: usage_00585.pdb # 7: usage_00586.pdb # 8: usage_00587.pdb # 9: usage_00588.pdb # 10: usage_00589.pdb # 11: usage_00590.pdb # 12: usage_00591.pdb # 13: usage_00790.pdb # 14: usage_00998.pdb # # Length: 44 # Identity: 13/ 44 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 44 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 44 ( 47.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00349.pdb 1 -HELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRV---- 39 usage_00508.pdb 1 ------------EECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 32 usage_00509.pdb 1 -HELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRV---- 39 usage_00573.pdb 1 -HELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 43 usage_00574.pdb 1 -HELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRVNRK- 42 usage_00585.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 31 usage_00586.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 31 usage_00587.pdb 1 QHELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRV---- 40 usage_00588.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 31 usage_00589.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRV---- 27 usage_00590.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRVNRKE 31 usage_00591.pdb 1 -------------ECIAWLKRFLEYGKDTLQRTEPPLVRV---- 27 usage_00790.pdb 1 -----------------WLRRYLENGKETLQRTDAPKTHMTHHA 27 usage_00998.pdb 1 -HELLYQKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRV---- 39 WLkRfLEyGKdTLQRTepPlvrv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################