################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:57 2021 # Report_file: c_0967_22.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00073.pdb # 2: usage_00123.pdb # 3: usage_00132.pdb # 4: usage_00155.pdb # 5: usage_00156.pdb # 6: usage_00157.pdb # 7: usage_00158.pdb # 8: usage_00161.pdb # 9: usage_00189.pdb # 10: usage_00190.pdb # 11: usage_00208.pdb # 12: usage_00241.pdb # 13: usage_00293.pdb # 14: usage_00383.pdb # 15: usage_00384.pdb # # Length: 39 # Identity: 5/ 39 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 39 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 39 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 --EVEQNSGPLSVPEGAIASLNCTYSFLG----SQSFFW 33 usage_00123.pdb 1 --VMTQSPSSLAVSAGEKVTMSCKSSQSLLN-------- 29 usage_00132.pdb 1 -IVLTQTPSSLPVSVGEKVTMTCKSSQTLLY-------- 30 usage_00155.pdb 1 --VMSQSPSSLAVSVGEKVTMSCKSSQSLLYSRNQMNYL 37 usage_00156.pdb 1 -MVMSQSPSSLAVSAGEKVSMSCKSSQTLLN-------- 30 usage_00157.pdb 1 -MVMSQSPSSLAVSAGEKVSMSCKSSQTLLN-------- 30 usage_00158.pdb 1 -MVMSQSPSSLAVSAGEKVSMSCKSSQTLLN-------- 30 usage_00161.pdb 1 -IVMTQSPSSLSVSAGERVTMSCKSSQSLLY-------- 30 usage_00189.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLN-------- 31 usage_00190.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLN-------- 31 usage_00208.pdb 1 DIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFL 39 usage_00241.pdb 1 -IVMTQAAPSVPVTPGESVSISCRSSKSLLH-------- 30 usage_00293.pdb 1 --VMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYL 37 usage_00383.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLN-------- 31 usage_00384.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLN-------- 31 v Q sl V Ge v C sS l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################