################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:08 2021 # Report_file: c_0967_19.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00020.pdb # 2: usage_00084.pdb # 3: usage_00094.pdb # 4: usage_00095.pdb # 5: usage_00096.pdb # 6: usage_00097.pdb # 7: usage_00098.pdb # 8: usage_00099.pdb # 9: usage_00100.pdb # 10: usage_00101.pdb # 11: usage_00142.pdb # 12: usage_00152.pdb # 13: usage_00153.pdb # 14: usage_00278.pdb # 15: usage_00359.pdb # 16: usage_00360.pdb # 17: usage_00382.pdb # # Length: 46 # Identity: 3/ 46 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 46 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 46 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -----LMTQTPVSLSVSLGDQASISCRSSQSIV-H----------- 29 usage_00084.pdb 1 -----QMTQSPSSLSASVGDRVTITCKSSQSLL-YTSS---QKNYL 37 usage_00094.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00095.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00096.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00097.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00098.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00099.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00100.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00101.pdb 1 DI---QMTQSPSSLSASVGDRVTITCRASQSVS-T----------- 31 usage_00142.pdb 1 DI---VMTQSPASLAVSLGQRATISCRASQSVS-T----------- 31 usage_00152.pdb 1 QM---TQS--PASLAVSPGQRATITCRASESVS-NYGINFI----- 35 usage_00153.pdb 1 QM---TQS--PASLAVSPGQRATITCRASESVS-NYGINFI----- 35 usage_00278.pdb 1 -KNTVVRG--LENVEALEGGEALFECQLSQPEV------------- 30 usage_00359.pdb 1 DI---VMTQSPASLAVSLGQRATISCRASQSVS-T----------- 31 usage_00360.pdb 1 DI---VMTQSPASLAVSLGQRATISCRASQSVS-T----------- 31 usage_00382.pdb 1 -PVRFQEA--LKDLEVLEGGAATLRCVLSSVAAP------------ 31 l G C S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################