################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:42 2021 # Report_file: c_0545_17.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00380.pdb # 2: usage_00381.pdb # 3: usage_00382.pdb # 4: usage_00383.pdb # 5: usage_00449.pdb # 6: usage_00658.pdb # 7: usage_00659.pdb # 8: usage_00660.pdb # 9: usage_00854.pdb # 10: usage_00855.pdb # # Length: 129 # Identity: 4/129 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/129 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/129 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00380.pdb 1 DVQAQVGLGQLHLHG----GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIV 56 usage_00381.pdb 1 DVQAQVGLGQLHLHG----GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIV 56 usage_00382.pdb 1 DVQAQVGLGQLHLHG----GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEG--IV 54 usage_00383.pdb 1 DVQAQVGLGQLHLHG----GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIV 56 usage_00449.pdb 1 --------CLSLVSN-----S--QINKQKLFQYLSKACELNSGNGCRFLGDFYENGK-YV 44 usage_00658.pdb 1 -AKAQLELGYRYFQG----NE-TTKDLTQ-ADWFRRAAEQGYTPAEYVLGLRY-NGE-GV 51 usage_00659.pdb 1 -VWSCNQLGYY-S-R----GLGVERNDAISAQWYRKSATSGDELGQLHLADY-YFGI-GV 51 usage_00660.pdb 1 -ATAQANLGAIYFRLGSEE------EHKKAVEWFRKAAAKGEKAAQFNLGNALLQGK-GV 52 usage_00854.pdb 1 DPKELVGLGAKSY-K--------EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQ-GV 50 usage_00855.pdb 1 DGDGCTILGSLYDAG----R-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE-GA 54 g a lg G v usage_00380.pdb 57 PQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQL 116 usage_00381.pdb 57 PQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQL 116 usage_00382.pdb 55 PQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQL 114 usage_00383.pdb 57 PQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQL 116 usage_00449.pdb 45 KKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACG 104 usage_00658.pdb 52 PQDYAQAVIWYKKAALKGLPQAQQNLGV-YHEGNGVKVDKAESVKWFRLAAEQGRDSGQQ 110 usage_00659.pdb 52 TQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQY 111 usage_00660.pdb 53 KKDEQQAAIW-RKAAEQGLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDNLFGTE 111 usage_00854.pdb 51 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCA 110 usage_00855.pdb 55 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 114 a ka LG G gv a usage_00380.pdb 117 QLGSMYYNG 125 usage_00381.pdb 117 QLGSMYYNG 125 usage_00382.pdb 115 QLGSMYYN- 122 usage_00383.pdb 117 QLGSMYYNG 125 usage_00449.pdb 105 IL------- 106 usage_00658.pdb 111 SGDAYF--- 116 usage_00659.pdb 112 YLAHLYD-- 118 usage_00660.pdb 112 NRNITEKKL 120 usage_00854.pdb 111 SLGGIYH-- 117 usage_00855.pdb 115 ILKQLK--- 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################