################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:26 2021 # Report_file: c_0769_112.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00629.pdb # 2: usage_00657.pdb # 3: usage_00658.pdb # # Length: 89 # Identity: 13/ 89 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 89 ( 62.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 89 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00629.pdb 1 -----GTPQGIGG--VPITRKQ-------VRAQRKALDLIEEEVGRPI----NYHSYV-S 41 usage_00657.pdb 1 GIKITSATVGRVIDLGIT----DSQDGSAAPAAADTIKQHLEDLGRTPDDYDLILTGDLS 56 usage_00658.pdb 1 GIKITSATVGRVIDLGIT----DSQDGSAAPAAADTIKQHLEDLGRTPDDYDLILTGDLS 56 satvGrvi git apAaadtikqhlEdlGRtp liltgd S usage_00629.pdb 42 GVAGPDIAVMFAEEGVNGAHQD-P----- 64 usage_00657.pdb 57 GVGSPILKDLLKEEGINV----GTKHNDC 81 usage_00658.pdb 57 GVGSPILKDLLKEEGINV----GTKHNDC 81 GVgsPilkdllkEEGiNv t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################