################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:16 2021 # Report_file: c_1233_103.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00060.pdb # 2: usage_00130.pdb # 3: usage_00977.pdb # 4: usage_01081.pdb # 5: usage_01082.pdb # 6: usage_01083.pdb # 7: usage_01109.pdb # 8: usage_01341.pdb # 9: usage_01452.pdb # 10: usage_01481.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 35 ( 5.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 35 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 DLAY-VIYT--NPKGTMLEHKGISNLKVFFENSLN 32 usage_00130.pdb 1 YI---IYTS--GPKGVQITYNCLVSFTKWAVEDFN 30 usage_00977.pdb 1 YI-IFTS-T-GQPKGVQISHDNLLSFTNWMIED-- 30 usage_01081.pdb 1 YV-MYTSGSTGLAKGVMIEHHNLVNFCEWYRPYFG 34 usage_01082.pdb 1 YV---MYTS--LAKGVMIEHHNLVNFCEWYRPYF- 29 usage_01083.pdb 1 YV---MYTS--LAKGVMIEHHNLVNFCEWYRPYFG 30 usage_01109.pdb 1 LL-LFTSGST-GPKGVILTHHNILSTAGTVVN--- 30 usage_01341.pdb 1 YI-IFTSGSTGRPKGVMVGQTAIVNRLLWMQNH-- 32 usage_01452.pdb 1 YI-IYTSGTTGRPKGVPVRHGNVTALFEACS---- 30 usage_01481.pdb 1 YI-MQTSGSTGKPKRIAVSYSNLHCYISQIDKL-- 32 Kg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################