################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:06 2021 # Report_file: c_0514_106.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00066.pdb # 2: usage_00299.pdb # 3: usage_00631.pdb # 4: usage_00632.pdb # # Length: 120 # Identity: 12/120 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/120 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/120 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 -ITKVALHTYDSGAVAFASPTLNNTMMPSVAAALNYVRGLTLIKGKPAFAFGAFGWSNRA 59 usage_00299.pdb 1 -ISEILKDIPDSEALIFGVSTYEAEIHPL-RFTLLEIIDKAN-YEKPVLVFGVHGWA--- 54 usage_00631.pdb 1 DRNDVIKEILDARAVLVGSPTINNDILPVVSPLLDDLVGLRP-KNKVGLAFGAYGWGGGA 59 usage_00632.pdb 1 -RNDVIKEILDARAVLVGSPTINNDILPVVSPLLDDLVGLRP-KNKVGLAFGAYGWGGGA 58 v k i D Av gspT nn i P L gl k K laFGa GW usage_00066.pdb 60 VP-----DIVAELRDGCKADVYDEKGITFKFNYTEE-LLEQAYNAGVDLGKRAIAYCEKN 113 usage_00299.pdb 55 --PSAERTAGELLK-ETKFRILSFT--EIKG----SNDERKIEEAISLLKKELE------ 99 usage_00631.pdb 60 QK-----ILEERLK-AAKIELIAEPGPTVQWVPRGE-DLQRCYELGRKIAARIA------ 106 usage_00632.pdb 59 QK-----ILEERLK-AAKIELIAEPGPTVQWVPRGE-DLQRCYELGRKIAAR-------- 103 e Lk K e t e dl ye g r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################