################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:27:30 2021 # Report_file: c_1012_36.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00020.pdb # 6: usage_00021.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00026.pdb # 10: usage_00027.pdb # 11: usage_00076.pdb # 12: usage_00078.pdb # 13: usage_00079.pdb # 14: usage_00080.pdb # 15: usage_00095.pdb # 16: usage_00101.pdb # 17: usage_00112.pdb # 18: usage_00181.pdb # 19: usage_00199.pdb # 20: usage_00200.pdb # 21: usage_00201.pdb # 22: usage_00240.pdb # 23: usage_00241.pdb # 24: usage_00242.pdb # 25: usage_00269.pdb # 26: usage_00270.pdb # 27: usage_00271.pdb # 28: usage_00272.pdb # 29: usage_00296.pdb # 30: usage_00298.pdb # 31: usage_00299.pdb # 32: usage_00321.pdb # 33: usage_00322.pdb # 34: usage_00323.pdb # 35: usage_00324.pdb # 36: usage_00325.pdb # 37: usage_00439.pdb # 38: usage_00481.pdb # 39: usage_00482.pdb # 40: usage_00501.pdb # 41: usage_00531.pdb # 42: usage_00532.pdb # 43: usage_00538.pdb # 44: usage_00543.pdb # 45: usage_00544.pdb # 46: usage_00580.pdb # # Length: 62 # Identity: 21/ 62 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 62 ( 46.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 62 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -IQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00007.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT- 57 usage_00012.pdb 1 --LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 58 usage_00013.pdb 1 --LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 58 usage_00020.pdb 1 -----KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 55 usage_00021.pdb 1 -----KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 55 usage_00024.pdb 1 ----IKCVVVGDGAVGKTCLLISYTTNKF---YVPTVFDNYAVTVMIGGEPYTLGLFDTA 53 usage_00025.pdb 1 ----IKCVVVGDGAVGKTCLLISYTTNKF---YVPTVFDNYAVTVMIGGEPYTLGLFDTA 53 usage_00026.pdb 1 ----IKCVVVGDGAVGKTCLLISYTTNKF---YVPTVFDNYAVTVMIGGEPYTLGLFDTA 53 usage_00027.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-IGGEPYTLGLFDTA 57 usage_00076.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTN----EYVPTVFDNYAVTVMIGGEPYTLGLFDTA 54 usage_00078.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT- 58 usage_00079.pdb 1 -----KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 55 usage_00080.pdb 1 ----IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 56 usage_00095.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00101.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00112.pdb 1 --QTIKCVVVGDVAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00181.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00199.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00200.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00201.pdb 1 -----KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 55 usage_00240.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00241.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00242.pdb 1 HMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 60 usage_00269.pdb 1 -PTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTA 59 usage_00270.pdb 1 -PTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTA 59 usage_00271.pdb 1 --TSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTA 58 usage_00272.pdb 1 --TSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTA 58 usage_00296.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPAVFDNYAVTVMIGGEPYTLGLFDT- 57 usage_00298.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00299.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00321.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00322.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00323.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00324.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00325.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00439.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00481.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPE-YVPTVFDNYAVTVMIGGEPYTLGLRDTA 58 usage_00482.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPE-YVPTVFDNYAVTVMIGGEPYTLGLRDTA 58 usage_00501.pdb 1 --KALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 58 usage_00531.pdb 1 --QTIKCVVVGDVAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00532.pdb 1 --QTIKCVVVGDVAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00538.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 usage_00543.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00544.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 usage_00580.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 58 K VVVGD AVGKtCLL sy Y PtVFd y v g L L DT usage_00006.pdb -- usage_00007.pdb -- usage_00012.pdb -- usage_00013.pdb -- usage_00020.pdb -- usage_00021.pdb -- usage_00024.pdb 54 GQ 55 usage_00025.pdb -- usage_00026.pdb 54 GQ 55 usage_00027.pdb -- usage_00076.pdb -- usage_00078.pdb -- usage_00079.pdb -- usage_00080.pdb -- usage_00095.pdb -- usage_00101.pdb 60 GQ 61 usage_00112.pdb -- usage_00181.pdb -- usage_00199.pdb -- usage_00200.pdb -- usage_00201.pdb -- usage_00240.pdb -- usage_00241.pdb -- usage_00242.pdb -- usage_00269.pdb -- usage_00270.pdb -- usage_00271.pdb -- usage_00272.pdb -- usage_00296.pdb -- usage_00298.pdb -- usage_00299.pdb -- usage_00321.pdb -- usage_00322.pdb -- usage_00323.pdb -- usage_00324.pdb -- usage_00325.pdb -- usage_00439.pdb -- usage_00481.pdb -- usage_00482.pdb -- usage_00501.pdb -- usage_00531.pdb 59 GQ 60 usage_00532.pdb 59 GQ 60 usage_00538.pdb -- usage_00543.pdb -- usage_00544.pdb -- usage_00580.pdb 59 GL 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################