################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:29 2021 # Report_file: c_0646_36.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00075.pdb # 2: usage_00121.pdb # 3: usage_00278.pdb # 4: usage_00281.pdb # 5: usage_00341.pdb # 6: usage_00342.pdb # # Length: 50 # Identity: 4/ 50 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 50 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 50 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 VSIYLVNGIKLQGQIESFDQFVILLK-N--------------TVSQMVY- 34 usage_00121.pdb 1 VTVFLLNGFQLRGQVKGFDNFTVLLE-S--------------EGKQQLIY 35 usage_00278.pdb 1 VTVFFLNGFQMKGVIEEYDKYVVSLN-S--------------QGKQHLIY 35 usage_00281.pdb 1 VVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIR- 49 usage_00341.pdb 1 VSIYLVNGIKLQGQIESFDQFVILLK-N--------------TVSQMVY- 34 usage_00342.pdb 1 VSIYLVNGIKLQGQIESFDQFVILLK-N--------------TVSQMVY- 34 V l Ng G D f ll q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################