################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:49 2021 # Report_file: c_1148_145.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01006.pdb # 2: usage_01224.pdb # 3: usage_01226.pdb # 4: usage_01245.pdb # 5: usage_01416.pdb # 6: usage_01800.pdb # 7: usage_02054.pdb # 8: usage_03030.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 64 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/ 64 ( 85.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01006.pdb 1 RYAGMTTLEAGG-ITGEYLMLTYA----------ND-----------AKLYVP------- 31 usage_01224.pdb 1 -KRIGNHITKSPED--KREYRGLELA--------NG-----------IKVLLISDP---- 34 usage_01226.pdb 1 -KRIGNHITKSPED--KREYRGLELA--------NG-----------IKVLLISDP---- 34 usage_01245.pdb 1 -KRIGNHITKSPED--KREYRGLELA--------NG-----------IKVLLISDP---- 34 usage_01416.pdb 1 GNYPLDRI-----------STGRSYAHADAPEGIAQ-----------FFVSEFHP----- 33 usage_01800.pdb 1 -KRIGNHITKSPED--KREYRGLELA--------NG-----------IKVLLISDP---- 34 usage_02054.pdb 1 -KRIGNHITKSPED--KREYRGLELA--------NG-----------IKVLLISDP---- 34 usage_03030.pdb 1 -----------------GKV--EISA----------GKFYADAEKSKGLRLTEDA-RFYA 30 usage_01006.pdb ---- usage_01224.pdb ---- usage_01226.pdb ---- usage_01245.pdb ---- usage_01416.pdb ---- usage_01800.pdb ---- usage_02054.pdb ---- usage_03030.pdb 31 LSTA 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################