################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:03:34 2021 # Report_file: c_1417_28.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00428.pdb # 2: usage_00429.pdb # 3: usage_00826.pdb # 4: usage_00827.pdb # 5: usage_00828.pdb # 6: usage_00962.pdb # 7: usage_00963.pdb # 8: usage_01054.pdb # 9: usage_01055.pdb # 10: usage_01056.pdb # 11: usage_01057.pdb # 12: usage_01058.pdb # 13: usage_01070.pdb # 14: usage_01071.pdb # 15: usage_01072.pdb # 16: usage_01073.pdb # 17: usage_01153.pdb # 18: usage_01154.pdb # 19: usage_01155.pdb # 20: usage_01156.pdb # 21: usage_01157.pdb # 22: usage_01158.pdb # 23: usage_01159.pdb # 24: usage_01250.pdb # 25: usage_01327.pdb # 26: usage_01328.pdb # 27: usage_01329.pdb # 28: usage_01330.pdb # 29: usage_01521.pdb # # Length: 68 # Identity: 50/ 68 ( 73.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 68 ( 73.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 68 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00428.pdb 1 -----LEIVDNE-SKFAELEFD--------CSFFQLV-KYLLQRRQFLTNDQIRYLPQLC 45 usage_00429.pdb 1 -----LEIVDNE-SKFAELEF-HQHL----CSFFQLV-KYLLQRRQFLTNDQIRYLPQLC 48 usage_00826.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_00827.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_00828.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_00962.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_00963.pdb 1 DKELLLEIVDNEMSKFAELEF-H-----SDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01054.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01055.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01056.pdb 1 DKELLLEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 59 usage_01057.pdb 1 -----LEIVDNEMSKFAELEF-H---GVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 51 usage_01058.pdb 1 DKELLLEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 59 usage_01070.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01071.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01072.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01073.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01153.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01154.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01155.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01156.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01157.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01158.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01159.pdb 1 ------EIVDNEMSKFAELEF-H-----SDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 48 usage_01250.pdb 1 DKELLLEIVDNEMSKFAELEF-H--LGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 57 usage_01327.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01328.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01329.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01330.pdb 1 -----LEIVDNEMSKFAELEF-HQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 54 usage_01521.pdb 1 -----LEIVDNEMSKFAELEF-HQHL----CSFFQLVMKYLLQRRQFLTNDQIRYLPQLC 50 EIVDNE SKFAELEF CSFFQLV KYLLQRRQFLTNDQIRYLPQLC usage_00428.pdb 46 RYLELWH- 52 usage_00429.pdb 49 RYLELWH- 55 usage_00826.pdb 55 RYLELWH- 61 usage_00827.pdb 55 RYLELWH- 61 usage_00828.pdb 55 RYLELWHG 62 usage_00962.pdb 55 RYLELWH- 61 usage_00963.pdb 55 RYLELWH- 61 usage_01054.pdb 55 RYLELWH- 61 usage_01055.pdb 55 RYLELWH- 61 usage_01056.pdb 60 RYLELWH- 66 usage_01057.pdb 52 RYLELWH- 58 usage_01058.pdb 60 RYLELWH- 66 usage_01070.pdb 55 RYLELWH- 61 usage_01071.pdb 55 RYLELWH- 61 usage_01072.pdb 55 RYLELWH- 61 usage_01073.pdb 55 RYLELWH- 61 usage_01153.pdb 55 RYLELWH- 61 usage_01154.pdb 55 RYLELWH- 61 usage_01155.pdb 55 RYLELWH- 61 usage_01156.pdb 55 RYLELWH- 61 usage_01157.pdb 55 RYLELWH- 61 usage_01158.pdb 55 RYLELWH- 61 usage_01159.pdb 49 RYLELWH- 55 usage_01250.pdb 58 RYLELWH- 64 usage_01327.pdb 55 RYLELWH- 61 usage_01328.pdb 55 RYLELWH- 61 usage_01329.pdb 55 RYLELWH- 61 usage_01330.pdb 55 RYLELWH- 61 usage_01521.pdb 51 RYLELWH- 57 RYLELWH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################