################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:39 2021 # Report_file: c_1102_11.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00043.pdb # 2: usage_00114.pdb # 3: usage_00159.pdb # 4: usage_00160.pdb # # Length: 120 # Identity: 73/120 ( 60.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/120 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/120 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 ------LFWRAVVAEFLATTLFVFISIGSALGFKYP-VGNNQTAVQDNVKVSLAFGLSIA 53 usage_00114.pdb 1 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNN-QTAVQDNVKVSLAFGLSIA 59 usage_00159.pdb 1 ------LFWRAVVAEFLATTLFVFISIGSALGFKYP-VGNNQTAVQDNVKVSLAFGLSIA 53 usage_00160.pdb 1 ---------RAVVAEFLATTLFVFISIGSALGFKYP-VGNNQ----TAVQDNVKVSLAFG 46 RAVVAEFLATTLFVFISIGSALGFKYP vgN Q dnVkvslafgLsia usage_00043.pdb 54 TLAQSV--GH--ISGAHLNPAVTLGLLLSCQI-SIFRALMYIIAQCVGAIVATAILSG-- 106 usage_00114.pdb 60 TLAQSV--GH--ISGAHLNPAVTLGLLLSCQI-SIFRALMYIIAQCVGAIVATAILSGIT 114 usage_00159.pdb 54 TLAQSV--GH--ISGAHLNPAVTLGLLLSCQI-SIFRALMYIIAQCVGAIVATAILS--- 105 usage_00160.pdb 47 LSIATLAQSVGHISGAHLNPAVTLGLLLSCQ-ISIFRALMYIIAQCVGAIVATAIL---- 101 tlaqsv gh ISGAHLNPAVTLGLLLSCQ SIFRALMYIIAQCVGAIVATAIL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################