################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:51 2021 # Report_file: c_1172_108.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_01455.pdb # 6: usage_01523.pdb # 7: usage_02733.pdb # 8: usage_03548.pdb # 9: usage_03580.pdb # # Length: 27 # Identity: 2/ 27 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 27 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 27 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_00123.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_00124.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_00125.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_01455.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_01523.pdb 1 QAMVE---LDSDE-LRVIRDGVTRRQQ 23 usage_02733.pdb 1 ---IE---VDTGY-VRVRENGGEKSYE 20 usage_03548.pdb 1 -----NLEVDSAQHLVVRDVSLQGST- 21 usage_03580.pdb 1 -----NLEVDSAQHLVVRDVSLQGST- 21 Ds l V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################