################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:57 2021 # Report_file: c_1291_18.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00729.pdb # 2: usage_01096.pdb # 3: usage_01112.pdb # 4: usage_01113.pdb # 5: usage_01114.pdb # 6: usage_01115.pdb # 7: usage_01293.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 57 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 57 ( 42.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00729.pdb 1 DFTSFPQKFIDLLEQCICEQDKE-----NPRFLLQLSSSSSAFDHSPSNLNIVETNA 52 usage_01096.pdb 1 DFHGFPRYLVGMLRDIADG---------ASAYELSFVLN----S-NRGTLRVLETTD 43 usage_01112.pdb 1 ---SFPGKIISLLEKCILA---QPGDSP--RFQAVLTIR----G-GESVFKIVEIND 44 usage_01113.pdb 1 -----PGKIISLLEKCILA---QPGDSP--RFQAVLTIR----G-GESVFKIVEIND 42 usage_01114.pdb 1 DFASFPGKIISLLEKCILA---QPGDSP--RFQAVLTIR----G-GESVFKIVEIND 47 usage_01115.pdb 1 -----PGKIISLLEKCILA---QPGDSP--RFQAVLTIR----G-GESVFKIVEIND 42 usage_01293.pdb 1 DFDAFPKVIIQHLLCK--------------NTEINIILD---AEKNFCSFELFSKTP 40 P i L e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################