################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:39 2021 # Report_file: c_0905_76.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00066.pdb # 4: usage_00180.pdb # 5: usage_00537.pdb # 6: usage_00665.pdb # 7: usage_00667.pdb # 8: usage_00692.pdb # 9: usage_00892.pdb # 10: usage_00987.pdb # 11: usage_00988.pdb # 12: usage_01051.pdb # 13: usage_01100.pdb # # Length: 47 # Identity: 2/ 47 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 47 ( 57.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 47 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ------GIDIPVL------LTVFVEANIQH---GQQVLCQRRTSPKP 32 usage_00042.pdb 1 ------GIDIPVL------LTVFVEANIQH---GQQVLCQRRTSPKP 32 usage_00066.pdb 1 E-----ITIKAD-----K-NKLVVRAQKSVACGDAAMSESVGRS-IP 35 usage_00180.pdb 1 ------GIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRT---- 33 usage_00537.pdb 1 FRVKIRGIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRTSPKP 43 usage_00665.pdb 1 FRVKIRGIDIPV-------LTVFVEANIQH---GQQVLCQRRTSPKP 37 usage_00667.pdb 1 ------GIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRTSPKP 37 usage_00692.pdb 1 ------GIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRTSPKP 37 usage_00892.pdb 1 ------GIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRTSPKP 37 usage_00987.pdb 1 ------GIDIPVLPRNTD-LTVFVEANIQH---GQQVLCQRRTSPKP 37 usage_00988.pdb 1 ------GIDIPVL----TDLTVFVEANIQH---GQQVLCQRRTSPKP 34 usage_01051.pdb 1 FRVKIRGIDIPVL------LTVFVEANIQH---GQQVLCQRRTSPKP 38 usage_01100.pdb 1 ------GIDIPVL----D-LTVFVEANIQH---GQQVLCQRRTSPKP 33 gidipv ltvfVeAniqh gqqvlcqrrt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################