################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:44 2021 # Report_file: c_1337_83.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00065.pdb # 2: usage_00388.pdb # 3: usage_00389.pdb # 4: usage_00608.pdb # 5: usage_00640.pdb # 6: usage_00670.pdb # 7: usage_00803.pdb # 8: usage_00909.pdb # 9: usage_00910.pdb # 10: usage_00940.pdb # 11: usage_00968.pdb # 12: usage_01088.pdb # 13: usage_01141.pdb # 14: usage_01170.pdb # 15: usage_01172.pdb # 16: usage_01282.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 57 ( 14.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 57 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 ----LFSVADNAYQNMVTDRENQSCLITGES-GAGKTESTKKVI--MYFARVAA--- 47 usage_00388.pdb 1 ---HLFSIADNAYQYMLQDRENQSMLITGES-GAGKTENTKKVI--QYFALVAA--- 48 usage_00389.pdb 1 -----FSIADNAYQYMLQDRENQSMLITGES-GAGKTENTKKVI--QYFALVAASLA 49 usage_00608.pdb 1 -----FAISDVAYRSMLDDRQNQSLLITGES-GAGKTENTKKVI--QYLASVAG--- 46 usage_00640.pdb 1 ------AVAEEAYKQMARDERNQSIIVSGES-GAGKTVSAKYAM--RYFATVS---- 44 usage_00670.pdb 1 ---HIFAISDVAYRSMLDDRQNQSLLITGES-GAGKTENTKKVI--QYLASVAG--- 48 usage_00803.pdb 1 ADVAEVCIQALLFEEAK----NKAFDLGSKPEGTSTP-------TKDFKALFSQV-- 44 usage_00909.pdb 1 ----IFAISDGAYVDMLTNHVNQSMLITGES-GAGKTENTKKVI--AYFATVGA--- 47 usage_00910.pdb 1 ----IFAISDGAYVDMLTNHVNQSMLITGES-GAGKTENTKKVI--AYFATVGA--- 47 usage_00940.pdb 1 -----FAISDVAYRSMLDDRQNQSLLITGES-GAGKTENTKKVI--QYLASVAG--- 46 usage_00968.pdb 1 -----FAISDVAYRSMLDDRQNQSLLITGES-GAGKTENTKKVI--QYLASVAG--- 46 usage_01088.pdb 1 ---HIFAVAEEAYKQMARNNRNQSIIVSGES-GAGKTVSARYAM--RYFATVSK--- 48 usage_01141.pdb 1 ----EFLKKCMQFYYMQKTQ--QALILVGKA-GCGKTATWKTVI--DAMAIF----- 43 usage_01170.pdb 1 ----IYAIADTAYRSMLQDREDQSILCTGES-GAGKTENTKKVI--QYLAVV----- 45 usage_01172.pdb 1 ----IYAIADTAYRSMLQDREDQSILCTGES-GAGKTENTKKVI--QYLAV------ 44 usage_01282.pdb 1 -----FAISDVAYRSMLDDRQNQSLLITGES-GAGKTENTKKVI--QYLASVAG--- 46 m q g G gkt A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################