################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:35 2021 # Report_file: c_0189_27.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00081.pdb # 2: usage_00086.pdb # 3: usage_00100.pdb # 4: usage_00473.pdb # 5: usage_00502.pdb # 6: usage_00673.pdb # 7: usage_00712.pdb # 8: usage_00739.pdb # 9: usage_00768.pdb # # Length: 242 # Identity: 113/242 ( 46.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/242 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/242 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 60 usage_00086.pdb 1 -SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR--- 56 usage_00100.pdb 1 -LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 59 usage_00473.pdb 1 -ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCTYGDLLNFLRRKAEAM 59 usage_00502.pdb 1 -SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR--- 56 usage_00673.pdb 1 -ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCTYGDLLNFLRRKAEAM 59 usage_00712.pdb 1 -LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 59 usage_00739.pdb 1 --DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR--- 55 usage_00768.pdb 1 -LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 59 E EALMSELK LG H NIVNLLGACT GP I EYC YGDLLN LR K usage_00081.pdb 61 ------------LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 108 usage_00086.pdb 57 ----------NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 106 usage_00100.pdb 60 -------IC---LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD- 108 usage_00473.pdb 60 LGPSLSG---RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 116 usage_00502.pdb 57 ----------NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 106 usage_00673.pdb 60 LGPS--G---RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 114 usage_00712.pdb 60 ----------LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 109 usage_00739.pdb 56 -----------QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 104 usage_00768.pdb 60 -------ICSLALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 112 L DLL F QVA GM FL K C HRD AARN L T G KI D usage_00081.pdb 109 GL-ARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 167 usage_00086.pdb 107 GL-ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 165 usage_00100.pdb 109 -FGLARD------------RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 155 usage_00473.pdb 117 GL-ARDIMNDSNYIVKGNARLPVKWMAPESIFDSVYTVQSDVWSYGILLWEIFSLGLNPY 175 usage_00502.pdb 107 GL-ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 165 usage_00673.pdb 115 GL-ARDIMNDSNYIVKGNARLPVKWMAPESIFDSVYTVQSDVWSYGILLWEIFSLGLNPY 173 usage_00712.pdb 110 GL-ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 168 usage_00739.pdb 105 GL-ARDIMNDSNYIVK-GARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 162 usage_00768.pdb 113 GL-ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 171 l ar i RLPVKWMAPES F YT SDVWSYGI LWE FSLG PY usage_00081.pdb 168 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ--- 224 usage_00086.pdb 166 PGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ--- 222 usage_00100.pdb 156 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI-- 213 usage_00473.pdb 176 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQITSFLQEQA-- 233 usage_00502.pdb 166 PGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 225 usage_00673.pdb 174 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQITSFLQEQA-- 231 usage_00712.pdb 169 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 228 usage_00739.pdb 163 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE---- 218 usage_00768.pdb 172 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 231 PG V FYK G M P A Y IM CW RP F usage_00081.pdb -- usage_00086.pdb -- usage_00100.pdb -- usage_00473.pdb -- usage_00502.pdb -- usage_00673.pdb -- usage_00712.pdb 229 S- 229 usage_00739.pdb -- usage_00768.pdb 232 ST 233 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################