################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:38:49 2021 # Report_file: c_0655_11.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00004.pdb # 2: usage_00020.pdb # 3: usage_00035.pdb # 4: usage_00038.pdb # 5: usage_00073.pdb # 6: usage_00198.pdb # 7: usage_00201.pdb # 8: usage_00202.pdb # 9: usage_00204.pdb # 10: usage_00207.pdb # 11: usage_00218.pdb # 12: usage_00262.pdb # 13: usage_00269.pdb # 14: usage_00299.pdb # 15: usage_00317.pdb # 16: usage_00318.pdb # # Length: 59 # Identity: 5/ 59 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 59 ( 18.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 59 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 NSVRVD-S--GCWMLYEQPNFTGCQYFLRRGD-YPDYQQWMGFSDSVRSCRL-IP---- 50 usage_00020.pdb 1 SSVRVQ-S--GTWVGYQYPGYRGLQYLLEKGD-YKDSGDFGAPQPQVQSVRR-IR---- 50 usage_00035.pdb 1 KSCRVS-G--GSWVVYDGENFTGNQYVLEEGH-YPCLSAMGCPPGATFKSLRFIS---- 51 usage_00038.pdb 1 NSVRVD-S--GCWMIYEQPNYLGPQYFLRRGD-YPDYQQWMGLNDSIRSCRL-IP---- 50 usage_00073.pdb 1 NSASVD-S--GCWMLYEQPNYSGLQYFLRRGD-YADHQQWMGLSDSVRSCRL-IPHSG- 53 usage_00198.pdb 1 NSVRVD-S--GCWMLYEQPNFTGCQYFLRRGD-YPDYQQWMGFSDSVRSCRL-IP---- 50 usage_00201.pdb 1 NSVRVD-S--GCWMLYEQPNFTGCQYFLRRGD-YPDYQQWMGFSDSVRSCRL-IP---- 50 usage_00202.pdb 1 NSVRVD-S--GCWMLYEQPNFTGCQYFLRRGD-YPDYQQWMGFSDSVRSCRL-IP---- 50 usage_00204.pdb 1 NSVRVD-S--GCWMLYEQPNFTGCQYFLRRGD-YPDYQQWMGFSDSVRSCRL-IP---- 50 usage_00207.pdb 1 NSIRVE-G--GTWAVYERPNFSGHMYILPQGE-YPEYQRWMGLNDRLGSCRA------- 48 usage_00218.pdb 1 NSIRVE-G--GTWAVYERPNFSGHMYILPQGE-YPEYQRWMGLNDRLGSCRA------- 48 usage_00262.pdb 1 GSVCVPFVERPYWYLFDNVNYTGRITGLGHGTCIDDFTK--SGFKGISSIKR-CIQT-K 55 usage_00269.pdb 1 NSIRVD-S--GCWMLYERPNYQGHQYFLRRGD-YPDYQQWMGFNDSIRSCRL-IP---- 50 usage_00299.pdb 1 --IKVE-G--GTWAVYERPNFAGYMYILPQGE-YPEYQRWMGLNDRLSSCRA-VHL--- 49 usage_00317.pdb 1 NSIRVD-S--GCWMLYERPNYQGHQYFLRRGD-YPDYQQWMGFNDSIRSCRL-IP---- 50 usage_00318.pdb 1 NSIRVD-S--GCWMLYERPNYQGHQYFLRRGD-YPDYQQWMGFNDSIRSCRL-IP---- 50 V g W y n G y L G y s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################