################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:47:05 2021 # Report_file: c_0331_3.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00054.pdb # 5: usage_00071.pdb # 6: usage_00072.pdb # 7: usage_00189.pdb # 8: usage_00190.pdb # 9: usage_00204.pdb # 10: usage_00214.pdb # 11: usage_00244.pdb # 12: usage_00271.pdb # 13: usage_00287.pdb # 14: usage_00288.pdb # 15: usage_00289.pdb # 16: usage_00325.pdb # 17: usage_00326.pdb # # Length: 143 # Identity: 67/143 ( 46.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/143 ( 46.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/143 ( 3.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 SAEEKQLISGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 60 usage_00048.pdb 1 TDAEKSTISAVWGKVNIDEIGPLALARVLIVYPWTQRYFGSFGNVSTPAAIMGNPKVAAH 60 usage_00049.pdb 1 TDAEKSTISAVWGKVNIDEIGPLALARVLIVYPWTQRYFGSFGNVSTPAAIMGNPKVAAH 60 usage_00054.pdb 1 -AEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 59 usage_00071.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAH 60 usage_00072.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAH 60 usage_00189.pdb 1 SAEEKQLISSLWGKVNVAECGAEALARLLIVYPWTQRFFTSFGNLSSASAIIGNPMVRAH 60 usage_00190.pdb 1 SAEEKQLISSLWGKVNVAECGAEALARLLIVYPWTQRFFTSFGNLSSASAIIGNPMVRAH 60 usage_00204.pdb 1 TSEEKQYITSLWAKVNVGEVGGEALARLLIVYPWTQRFFASFGNLSSANAILHNAKVLAH 60 usage_00214.pdb 1 SAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 60 usage_00244.pdb 1 SAEEKQLISGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 60 usage_00271.pdb 1 SAEEKQLITGLWGKVNVAECGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 60 usage_00287.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAH 60 usage_00288.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAH 60 usage_00289.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAH 60 usage_00325.pdb 1 TSEEKQYITSLWAKVNVGEVGGEALARLLIVYPWTQRFFASFGNLSSANAILHNAKVLAH 60 usage_00326.pdb 1 TAEEKQLITGLWGKVNVAECGAEALARLLIVYPWTQRFFASFGNLSSATAITGNPMVRAH 60 EK I W KVN G ALAR LIVYPWTQR F SFGN S AI N V AH usage_00047.pdb 61 GKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFTKEFT 120 usage_00048.pdb 61 GKVVCGALDKAVKNMGNILATYKSLSETHANKLFVDPDNFRVLADVLTIVIAAKFGASFT 120 usage_00049.pdb 61 GKVVCGALDKAVKNMGNILATYKSLSETHANKLFVDPDNFRVLADVLTIVIAAKFGASFT 120 usage_00054.pdb 60 GKKVLTSFGDAVKNLDNIKNTFSQLSELHCDKLHVDPENFRLLGDILIIVLAAHFSKDFT 119 usage_00071.pdb 61 GKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFT 120 usage_00072.pdb 61 GKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFT 120 usage_00189.pdb 61 GKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKEFT 120 usage_00190.pdb 61 GKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKEFT 120 usage_00204.pdb 61 GQKVLTSFGEAVKNLDNIKKTFAQLSELHCEKLHVDPENFKLLGNILIIVLATHFPKEFT 120 usage_00214.pdb 61 GKKVLTSFGDAVKNLDNIKNTFSQLSELHCDKLHVDPENFRLLGDILIIVLAAHFSKDFT 120 usage_00244.pdb 61 GKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFTKEFT 120 usage_00271.pdb 61 GKKVLTSFGDAVKNLDNIKNTFSQLSELHCDKLHVDPENFRLLGDILIIVLAAHFTKDFT 120 usage_00287.pdb 61 GKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFT 120 usage_00288.pdb 61 GKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFT 120 usage_00289.pdb 61 GKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFT 120 usage_00325.pdb 61 GQKVLTSFGEAVKNLDNIKKTFAQLSELHCEKLHVDPENFKLLGNILIIVLATHFPKEFT 120 usage_00326.pdb 61 GKKVLTSFGEAVKNLDNIKATFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFT 120 G V AVKN NI T LSE H KL VDP NF L L I A F FT usage_00047.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00048.pdb 121 PEIQATWQKFMKVVVAAMG---- 139 usage_00049.pdb 121 PEIQATWQKFMKVVVAAMG---- 139 usage_00054.pdb 120 PECQAAWQKLVRVVAHALA---- 138 usage_00071.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00072.pdb 121 PECQAAWQKLVRVVAHALAR--- 140 usage_00189.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00190.pdb 121 PECQAAWQKLVRVVAHALARKYH 143 usage_00204.pdb 121 PASQAAWTKLVNAVAHALA---- 139 usage_00214.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00244.pdb 121 PECQAAWQKLVRVVAHALARKYH 143 usage_00271.pdb 121 PECQAAWQKLVRVVAHALAR--- 140 usage_00287.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00288.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00289.pdb 121 PECQAAWQKLVRVVAHALA---- 139 usage_00325.pdb 121 PASQAAWTKLVNAVAHALAL--- 140 usage_00326.pdb 121 PECQAAWQKLVGAVAHALA---- 139 P QA W K V A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################