################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:25 2021 # Report_file: c_1396_33.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00344.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00488.pdb # 5: usage_00489.pdb # 6: usage_00490.pdb # 7: usage_00491.pdb # 8: usage_00492.pdb # 9: usage_00493.pdb # 10: usage_00494.pdb # # Length: 79 # Identity: 67/ 79 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 79 ( 84.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 79 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00344.pdb 1 ----LSELSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPH-KEEEEVFQP-L-EY 53 usage_00345.pdb 1 ----LSELSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPH-KEEEEVFQP-L-EY 53 usage_00346.pdb 1 --LS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 57 usage_00488.pdb 1 --LS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 57 usage_00489.pdb 1 --LS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 57 usage_00490.pdb 1 NKLS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 59 usage_00491.pdb 1 NKLS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 59 usage_00492.pdb 1 -KLS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 58 usage_00493.pdb 1 -KLS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 58 usage_00494.pdb 1 NKLS-EMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEY 59 LSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPH KEEEEVFQP L EY usage_00344.pdb 54 FTYEELKDIKKKVIAQHCS 72 usage_00345.pdb 54 FTYEELKDIKKKVIAQH-- 70 usage_00346.pdb 58 FTYEELKDIKKKVIAQHCS 76 usage_00488.pdb 58 FTYEELKDIKKKVIAQH-- 74 usage_00489.pdb 58 FTYEELKDIKKKVIAQH-- 74 usage_00490.pdb 60 FTYEELKDIKKKVIAQHC- 77 usage_00491.pdb 60 FTYEELKDIKKKVIAQHC- 77 usage_00492.pdb 59 FTYEELKDIKKKVIAQH-- 75 usage_00493.pdb 59 FTYEELKDIKKKVIAQHC- 76 usage_00494.pdb 60 FTYEELKDIKKKVIAQH-- 76 FTYEELKDIKKKVIAQH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################