################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:20 2021 # Report_file: c_1223_25.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00082.pdb # 2: usage_00220.pdb # 3: usage_00245.pdb # 4: usage_00588.pdb # 5: usage_00733.pdb # 6: usage_01098.pdb # 7: usage_01104.pdb # 8: usage_01105.pdb # 9: usage_01183.pdb # # Length: 56 # Identity: 1/ 56 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 56 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 56 ( 66.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 -MDPVVLSYM----DSLLRQ-SDVSLLDPPSWLNDH--IIGFAFEYFA-------- 40 usage_00220.pdb 1 --------ISGDYRGYQVYS-P--------------PPSSGGIHIVQILNILE--- 30 usage_00245.pdb 1 --------IWGDYQGYQIATTP--------------PPSSGGIFLLQMPKILDHFN 34 usage_00588.pdb 1 YKAVERTPISGDYRGYQVYSMP--------------PPSSGGIHIVQILNILE--- 39 usage_00733.pdb 1 -KAVERTPISGDYRGYQVYSMP--------------PPSSGGIHIVQILNILE--- 38 usage_01098.pdb 1 YKAVERTPISGDYRGYQVYS-P--------------PPSSGGIHIVQILNILE--- 38 usage_01104.pdb 1 YKAVERTPISGDYRGYQVYS-P--------------PPSSGGIHIVQILNILE--- 38 usage_01105.pdb 1 --------ISGDYRGYQVYS-P--------------PPSSGGIHIVQILNILE--- 30 usage_01183.pdb 1 --------VVGSYRGYKIISMS--------------PPSSGGTHLIQILNVME--- 31 gy ssGg q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################