################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:46 2021 # Report_file: c_1089_177.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00260.pdb # 2: usage_00425.pdb # 3: usage_00427.pdb # 4: usage_00669.pdb # 5: usage_01512.pdb # 6: usage_01565.pdb # 7: usage_01604.pdb # 8: usage_01649.pdb # 9: usage_01651.pdb # # Length: 87 # Identity: 1/ 87 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 87 ( 4.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 87 ( 54.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 --LAAMAVLESHW-----------KQDLTKEEAIKLASDAIQAGIWNDL----GS----- 38 usage_00425.pdb 1 CSEQMYGMCESLW-----------EPNMDPEHLFETISQAMLNAVDRDA----VS----- 40 usage_00427.pdb 1 CSEQMYGMCESLW-----------EPNMDPEHLFETISQAMLNAVDRDA----VS----- 40 usage_00669.pdb 1 ASAMLQPLLDNQVGFKNMQNVEHV--PLSLDRAMRLVKDVFISAAERDV----YT----- 49 usage_01512.pdb 1 -AEQMYGMCESLW-----------EPNMDPDHLFETISQAMLNAVDRDA----VS----- 39 usage_01565.pdb 1 ----TPMNRKS-------------MPEADFSSWT---PLEFLVETFHDWITGN-KRPNSG 39 usage_01604.pdb 1 -SEQMYGMCESLW-----------EPNMDPEHLFETISQAMLNAVDRDA----VS----- 39 usage_01649.pdb 1 ----MYGMCESLW-----------EPNMDPDHLFETISQAMLNAVDRDA----VS----- 36 usage_01651.pdb 1 ----MYGMCESLW-----------EPNMDPDHLFETISQAMLNAVDRDA----VS----- 36 s D usage_00260.pdb 39 --GSNVDVCVMEIGKDAEYLRNYLTPN 63 usage_00425.pdb 41 --GMGVIVHVIEKDKITTRT------- 58 usage_00427.pdb 41 --GMGVIVHVIEKDKITTRT------- 58 usage_00669.pdb 50 --GDALRICIVTKEGIREET------- 67 usage_01512.pdb 40 --GMGVIVHIIEKDKITTRT------- 57 usage_01565.pdb 40 SL-IQVVTTD---GKTEL-T------- 54 usage_01604.pdb 40 --GMGVIVHVIEKDKITTRT------- 57 usage_01649.pdb 37 --GMGVIVHIIEKDKITT--------- 52 usage_01651.pdb 37 --GMGVIVHIIEKDKITT--------- 52 v k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################