################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:33 2021 # Report_file: c_1488_68.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_03328.pdb # 2: usage_03449.pdb # 3: usage_03906.pdb # 4: usage_03907.pdb # 5: usage_03908.pdb # 6: usage_03909.pdb # 7: usage_03925.pdb # 8: usage_03926.pdb # 9: usage_03943.pdb # 10: usage_03944.pdb # 11: usage_04305.pdb # 12: usage_07444.pdb # 13: usage_07451.pdb # # Length: 25 # Identity: 0/ 25 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 25 ( 4.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 25 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03328.pdb 1 PKVTEYWTQGPAAEKASERLG---- 21 usage_03449.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03906.pdb 1 PKVTQYWTEGPAAELAEQR------ 19 usage_03907.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03908.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03909.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03925.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03926.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_03943.pdb 1 ---------PAAELAEQRLGH--TG 14 usage_03944.pdb 1 ---------PAAELAEQRLGH--TG 14 usage_04305.pdb 1 PKVTQYWTEGPAAELAEQRLG---- 21 usage_07444.pdb 1 PKVTSYWTEGPASEKAAERLG---- 21 usage_07451.pdb 1 GKAMK----KWVESITKIIQRKKIA 21 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################