################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:39 2021 # Report_file: c_1442_501.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_02879.pdb # 2: usage_06199.pdb # 3: usage_07451.pdb # 4: usage_07952.pdb # 5: usage_07953.pdb # 6: usage_08884.pdb # 7: usage_10146.pdb # 8: usage_10432.pdb # 9: usage_12158.pdb # 10: usage_17736.pdb # 11: usage_17764.pdb # 12: usage_19102.pdb # # Length: 23 # Identity: 0/ 23 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 23 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 23 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02879.pdb 1 -H--LVHGWMRGSHAGPLMPA-- 18 usage_06199.pdb 1 ----VTA-HI-EGQPVEVLLDT- 16 usage_07451.pdb 1 R-PVVTA-YI-EGQPVEVLLDT- 19 usage_07952.pdb 1 ----VTA-YI-EGQPVEVLLDT- 16 usage_07953.pdb 1 ----VTA-YI-EGQPVEVLLDT- 16 usage_08884.pdb 1 --PVVTA-YI-EGQPVEVLLDT- 18 usage_10146.pdb 1 ----VTA-YI-EGQPVEVLLDT- 16 usage_10432.pdb 1 --WTCTV-LQ-NQKKVEFKI-DI 18 usage_12158.pdb 1 ----VTA-HI-EGQPVE------ 11 usage_17736.pdb 1 R-PVVTA-YI-EGQPVEVLLDT- 19 usage_17764.pdb 1 --PLVTI-KI-GGQLKEALLDT- 18 usage_19102.pdb 1 ----VTA-YI-EGQPVE------ 11 t e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################