################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:38:15 2021 # Report_file: c_0565_25.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00159.pdb # 8: usage_00160.pdb # 9: usage_00161.pdb # 10: usage_00162.pdb # 11: usage_00163.pdb # 12: usage_00171.pdb # 13: usage_00172.pdb # 14: usage_00173.pdb # 15: usage_00174.pdb # 16: usage_00175.pdb # # Length: 108 # Identity: 87/108 ( 80.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/108 ( 80.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/108 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --RIETIPMVAP-LMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 57 usage_00020.pdb 1 --RIETIPMVAP-L---RATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 54 usage_00021.pdb 1 --RIETIPMVAP-L--HRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 55 usage_00022.pdb 1 Y------H------MTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 48 usage_00023.pdb 1 --RIETIPMVAP-L---RATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 54 usage_00024.pdb 1 -H----YH------MTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLI 49 usage_00159.pdb 1 --APLAREFRG----THRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 53 usage_00160.pdb 1 --APLAREFRGS-H-THRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 55 usage_00161.pdb 1 --APLAREFRGS-H-THRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 55 usage_00162.pdb 1 --APLAREFRGS---THRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 54 usage_00163.pdb 1 --APLAREFRGS-H-THRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 55 usage_00171.pdb 1 --RIETIP-V-A-----RATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 50 usage_00172.pdb 1 --RIETIP-VAPLA--HRATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 54 usage_00173.pdb 1 --RIETIP-V-A-----RATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 50 usage_00174.pdb 1 --RIETIP-V-A-----RATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 50 usage_00175.pdb 1 --RIETIP-V-A-----RATIVTRVHTDAGIIGEAYTGDEHET-FDIDRIIHEELAPTLI 50 RATIVTRVHTDAGIIGEAYTGDEHET FDIDRIIHEELAPTLI usage_00019.pdb 58 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 104 usage_00020.pdb 55 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 101 usage_00021.pdb 56 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKA-- 101 usage_00022.pdb 49 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 95 usage_00023.pdb 55 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALK 102 usage_00024.pdb 50 GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 96 usage_00159.pdb 54 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 99 usage_00160.pdb 56 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 101 usage_00161.pdb 56 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 101 usage_00162.pdb 55 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALK 101 usage_00163.pdb 56 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALK 102 usage_00171.pdb 51 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 96 usage_00172.pdb 55 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 100 usage_00173.pdb 51 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 96 usage_00174.pdb 51 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 96 usage_00175.pdb 51 GQDA-AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKAL- 96 GQDA AIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################