################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:18 2021 # Report_file: c_0177_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00034.pdb # 5: usage_00035.pdb # 6: usage_00088.pdb # 7: usage_00089.pdb # 8: usage_00246.pdb # 9: usage_00247.pdb # # Length: 207 # Identity: 125/207 ( 60.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 137/207 ( 66.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/207 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00012.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00013.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00034.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00035.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00088.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00089.pdb 1 PVALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRPNSAIPVQADL 60 usage_00246.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00247.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 PVALVTGAAKRLGrsIAEGLHAEGYAVCLHYHRSAAEANaLsATLNARRPNSAItVQADL usage_00011.pdb 61 SNVATAP-------PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----REA 109 usage_00012.pdb 61 SNVATA--------PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR---DREA 109 usage_00013.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----REA 110 usage_00034.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN--DREA 112 usage_00035.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDGDREA 114 usage_00088.pdb 61 SNVATAPVSGAGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN--DREA 118 usage_00089.pdb 61 SNV----------APVTLFKRCADLVAACYTHWGRCDVLVNNA-S--------------- 94 usage_00246.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN--DREA 112 usage_00247.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----REA 110 SNV PVTLFtRCAeLVAACYTHWGRCDVLVNNA S usage_00011.pdb 110 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 161 usage_00012.pdb 110 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 161 usage_00013.pdb 111 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 162 usage_00034.pdb 113 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 164 usage_00035.pdb 115 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ- 165 usage_00088.pdb 119 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 170 usage_00089.pdb 95 -----REAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMT--S 147 usage_00246.pdb 113 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 164 usage_00247.pdb 111 METAT--------ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 162 ADLFGSNAiAPYFLIKAFAHRVAgTPAkhRGTNYSIiNMVDAMT usage_00011.pdb 162 LLG--YTIYTMAKGALEGLTRSAALEL 186 usage_00012.pdb 162 LLG--YTIYTMAKGALEGLTRSAALEL 186 usage_00013.pdb 163 LLG--YTIYTMAKGALEGLTRSAALEL 187 usage_00034.pdb 165 LLG--YTIYTMAKGALEGLTRSAALE- 188 usage_00035.pdb --------------------------- usage_00088.pdb 171 LLG--YTIYTMAKGALEGLTRSAALEL 195 usage_00089.pdb 148 QPLLGYTIYTMAKGALEGLTRSAALEL 174 usage_00246.pdb 165 LLG--YTIYTMAKGALEGLTRSAALEL 189 usage_00247.pdb 163 LLG--YTIYTMAKGALEGLTRSAALEL 187 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################