################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:33 2021 # Report_file: c_0850_22.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00146.pdb # 2: usage_00394.pdb # 3: usage_00395.pdb # 4: usage_00396.pdb # 5: usage_00397.pdb # 6: usage_00398.pdb # 7: usage_00399.pdb # 8: usage_00400.pdb # 9: usage_00401.pdb # 10: usage_00842.pdb # # Length: 93 # Identity: 6/ 93 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 93 ( 30.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 93 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 ----------SITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNES--TENIGARR--- 45 usage_00394.pdb 1 --KHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 48 usage_00395.pdb 1 EKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 50 usage_00396.pdb 1 ---HLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 47 usage_00397.pdb 1 ---HLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 47 usage_00398.pdb 1 ---HLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 47 usage_00399.pdb 1 ---HLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 47 usage_00400.pdb 1 ---HLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 47 usage_00401.pdb 1 EKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVD----LEYG------ARP 50 usage_00842.pdb 1 --QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD----PVYG------ARP 48 ql krl e Ie tD a aE g d yg usage_00146.pdb 46 ----LHTVLERLMEEISYDAS-DLSGQNITID- 72 usage_00394.pdb 49 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVL-- 78 usage_00395.pdb 51 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVL-- 80 usage_00396.pdb 48 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLD- 78 usage_00397.pdb 48 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLD- 78 usage_00398.pdb 48 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLD- 78 usage_00399.pdb 48 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLDV 79 usage_00400.pdb 48 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLD- 78 usage_00401.pdb 51 LRRAIQKHVEDRLSEELLRG-NIHKGQHIVLD- 81 usage_00842.pdb 49 LKRAIQQQIENPLAQQILSG-ELVPGKVIRLE- 79 iq E l e l g Gq I l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################