################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:24 2021 # Report_file: c_1434_288.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00442.pdb # 2: usage_01248.pdb # 3: usage_01262.pdb # 4: usage_01901.pdb # 5: usage_01917.pdb # 6: usage_02066.pdb # 7: usage_02067.pdb # # Length: 83 # Identity: 6/ 83 ( 7.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 83 ( 28.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 83 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00442.pdb 1 -GSILKIEKVLKRMREIKNELLQAQNP---SELYLSSKTELQGLIGQLDEVSLEKNPCIR 56 usage_01248.pdb 1 HPSISRLQEIQREVKAIEPQVVGFSG-LSDDKNYKRLERILTKQLFEIDSVDTEGKGDIQ 59 usage_01262.pdb 1 ------VEAILEKVQGLEQAVDSFEG-KKTDKKYLMIEEYLTKELLALDSVDPEGRADVR 53 usage_01901.pdb 1 PPSIKKIIHVLEKVQYLEQEVEEFVG-KKTDKAYWLLEEMLTKELLELDSVETGGQDSVR 59 usage_01917.pdb 1 ---IKKIIHVLEKVQYLEQEVEEFVG-KKTDKAYWLLEEMLTKELLELDSVETGGQDSVR 56 usage_02066.pdb 1 HPSHKAVWNVLGNLSEIQGEVLSFDG-NRTDKNYIRLEELLTKQLLALDAVDPQGEEKCK 59 usage_02067.pdb 1 --SHKAVWNVLGNLSEIQGEVLSFDG-NRTDKNYIRLEELLTKQLLALDAVDPQGEEKCK 57 l v f g dk Y e Ltk l lD V g usage_00442.pdb 57 EARRRAVIEVQTLITYIDLKES- 78 usage_01248.pdb 60 QARKRAAQETERLLKELEQNAS- 81 usage_01262.pdb 54 QARRDGVRKVQTILEKLEQKASG 76 usage_01901.pdb 60 QARKEAVCKIQAILEKLEKKGL- 81 usage_01917.pdb 57 QARKEAVCKIQAILEKLEKKG-- 77 usage_02066.pdb 60 AARKQAVRLAQNILSYLDLKS-- 80 usage_02067.pdb 58 AARKQAVRLAQNILSYLDLKS-- 78 AR av q l l k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################