################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:48 2021 # Report_file: c_1489_177.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00247.pdb # 2: usage_00248.pdb # 3: usage_00249.pdb # 4: usage_01267.pdb # 5: usage_01268.pdb # 6: usage_01269.pdb # 7: usage_01270.pdb # 8: usage_01753.pdb # 9: usage_01878.pdb # 10: usage_01879.pdb # 11: usage_02090.pdb # 12: usage_02091.pdb # # Length: 67 # Identity: 2/ 67 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 67 ( 17.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 67 ( 65.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00247.pdb 1 --DFDFLKNLSLEELQRLKALD-P--EREIEELRQRY---------TAKR--------QP 38 usage_00248.pdb 1 ADDFDFLKNLSLEELQ-RLKALDP--EREIEELRQRY---------TAKR--------QP 40 usage_00249.pdb 1 --DFDFLKNLSLEELQRLKALD-P--EREIEELRQRY---------TAKR--------QP 38 usage_01267.pdb 1 SMDFDFLKNLSLEELQMRLKALDPMMEREIEELRQRY---------TAKR--------QP 43 usage_01268.pdb 1 ---FDFLKNLSLEELQMRLKALDPMMEREIEELRQRY---------TAKR--------QP 40 usage_01269.pdb 1 ---FDFLKNLSLEELQMRLKALDPMMEREIEELRQRY---------TAKR--------QP 40 usage_01270.pdb 1 SMDFDFLKNLSLEELQMRLKALDPMMEREIEELRQRY---------TAKR--------QP 43 usage_01753.pdb 1 ----------TAEGEKLYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDAL-- 48 usage_01878.pdb 1 ---FDFLKNLSLEELQRLKALD-P--EREIEELRQRY---------TAKR--------QP 37 usage_01879.pdb 1 ---FDFLKNLSLEELQRLKALD-P--EREIEELRQRY---------TAKR--------QP 37 usage_02090.pdb 1 --DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKY---------------------QS 37 usage_02091.pdb 1 --DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKY---------------------QS 37 E lq p E eiee rq y usage_00247.pdb 39 ILDADA- 44 usage_00248.pdb 41 ILDAD-- 45 usage_00249.pdb 39 ILDAD-- 43 usage_01267.pdb 44 ILDAMDA 50 usage_01268.pdb 41 ILDAMDA 47 usage_01269.pdb 41 ILDAMDA 47 usage_01270.pdb 44 ILDAMD- 49 usage_01753.pdb ------- usage_01878.pdb 38 ILDADAK 44 usage_01879.pdb 38 ILDADA- 43 usage_02090.pdb 38 KR----- 39 usage_02091.pdb 38 KR----- 39 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################