################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:02 2021 # Report_file: c_0633_26.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00053.pdb # 2: usage_00066.pdb # 3: usage_00186.pdb # 4: usage_00277.pdb # 5: usage_00278.pdb # 6: usage_00279.pdb # # Length: 111 # Identity: 39/111 ( 35.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/111 ( 46.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/111 ( 0.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 TEEEKIRVDIIENQVMDFRTQLIRLCYSSDHEKLKPQYLEELPGQLKQFSMFLGKFSWFA 60 usage_00066.pdb 1 TEEEKIRVDILENQTMDNHMQLGMICYNPEFEKLKPKYLEELPEKLKLYSEFLGKRPWFA 60 usage_00186.pdb 1 TEEERIRADIVENQVMDNRMQLIMLCFNPDFEKQKPEFLKTIPEKMKLYSEFLGKRPWFA 60 usage_00277.pdb 1 TPEERARISMIEGAAMDLRMGFVRVCYNPKFEEVKGDYLKELPTTLKMWSNFLGDRHYLT 60 usage_00278.pdb 1 -PEERARISMIEGAAMDLRMGFVRVCYNPKFEEVKGDYLKELPTTLKMWSNFLGDRHYLT 59 usage_00279.pdb 1 TPEERARISMIEGAAMDLRMGFVRVCYNPKFEEVKGDYLKELPTTLKMWSNFLGDRHYLT 60 EE R E MD rm Cynp fE K yL elP lK S FLG r usage_00053.pdb 61 GEKLTFVDFLTYDILDQNRIFDPKCLDEFPNLKAFMCRFEALEKIAAYLQS 111 usage_00066.pdb 61 GNKITFVDFLVYDVLDLHRIFEPKCLDAFPNLKDFISRFEGLEKISAYMKS 111 usage_00186.pdb 61 GDKVTYVDFLAYDILDQYHIFEPKCLDAFPNLKDFLARFEGLKKISAYMKS 111 usage_00277.pdb 61 GSSVSHVDFMVYEALDCIRYLAPQCLEDFPKLKEFKSRIEDLPKIKAYMES 111 usage_00278.pdb 60 GSSVSHVDFMVYEALDCIRYLAPQCLEDFPKLKEFKSRIEDLPKIKAYMES 110 usage_00279.pdb 61 GSSVSHVDFMVYEALDCIRYLAPQCLEDFPKLKEFKSRIEDLPKIKAYMES 111 G VDF Y LD r P CL FP LK F R E L KI AYm S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################