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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:23:12 2021
# Report_file: c_0577_2.html
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#====================================
# Aligned_structures: 6
#   1: usage_00012.pdb
#   2: usage_00013.pdb
#   3: usage_00017.pdb
#   4: usage_00018.pdb
#   5: usage_00019.pdb
#   6: usage_00044.pdb
#
# Length:         94
# Identity:       20/ 94 ( 21.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     55/ 94 ( 58.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           39/ 94 ( 41.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00012.pdb         1  -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-PDAALNQDN---------   48
usage_00013.pdb         1  -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-PDAALNQDN---------   48
usage_00017.pdb         1  -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-P-----------------   40
usage_00018.pdb         1  -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVAP--------N---------   41
usage_00019.pdb         1  -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQ------------------------   34
usage_00044.pdb         1  QELTIYHIP--GPFSERVEILELKGLR---KDVEIDIS-------------KPRPDWLLA   42
                            sLTlfHnP   PyvrkVvlLhetGql   alqasq                        

usage_00012.pdb        49  PLG---KIPALRLDNGQVLYDSRVILDYLDQQH-   78
usage_00013.pdb        49  PLG---KIPALRLDNGQVLYDSRVILDYLDQQH-   78
usage_00017.pdb        41  PLG---KIPALRLDNGQVLYDSRVILDYLDQQH-   70
usage_00018.pdb        42  PLG---KIPALRLDNGQVLYDSRVILDYLDQQH-   71
usage_00019.pdb        35  PLG---KIPALRLDNGQVLYDSRVILDYLD----   61
usage_00044.pdb        43  KTGGTTALPLLDVENGESLKES-VILRYLEQRYP   75
                           plG   kiPaLrldNGqvLydS VILdYLd    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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