################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:51 2021 # Report_file: c_1221_259.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_02196.pdb # 2: usage_02586.pdb # 3: usage_02587.pdb # # Length: 67 # Identity: 3/ 67 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 67 ( 52.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 67 ( 47.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02196.pdb 1 --KDVWINGFTPQYTSVWGFS---K----VKQYGENSFV-----GHSQQEYPQFLYENV- 45 usage_02586.pdb 1 SKFWYL-EH--AKTG------ETSVPKCWLVT--NGSY-LNETHFSDQIEQEADNMITEM 48 usage_02587.pdb 1 SKFWYL-EH--AKTG------ETSVPKCWLVT--NGSY-LNETHFSDQIEQEADNMITEM 48 fwyl eh aktg v lvt ngSy fsdQiEqeadnmite usage_02196.pdb 46 SKI---- 48 usage_02586.pdb 49 LR-KDYI 54 usage_02587.pdb 49 LR-KD-- 52 lr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################