################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:24 2021 # Report_file: c_0608_110.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00031.pdb # 2: usage_00135.pdb # 3: usage_00136.pdb # 4: usage_00386.pdb # 5: usage_00573.pdb # # Length: 87 # Identity: 20/ 87 ( 23.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 87 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 87 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 -DYLVQAFNMAHEADP-NALLFYNDYNETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHW 58 usage_00135.pdb 1 TEYIEVAFRATREAGGSDIKLYINDYNTDDPVKRDILYELVKNLLEKGVPIDGVGHQTHI 60 usage_00136.pdb 1 -EYIEVAFRATREAGGSDIKLYINDYNTDDPVKRDILYELVKNLLEKGVPIDGVGHQTHI 59 usage_00386.pdb 1 -DYIKIAFEIAKKYTG-NGKLFYNDYNNEMPYKLEKTYKVLKSLLEEGTPIDGVGIQAHW 58 usage_00573.pdb 1 --YIKIAFEIAKKYTG-NGKLFYNDYNNEMPYKLEKTYKVLKSLLEEGTPIDGVGIQAHW 57 Yi AF g kL NDYN P K Y k LLe G PidGvG Q H usage_00031.pdb 59 NIHGPSMDEIRQAIERYASL-DVQLHV 84 usage_00135.pdb 61 DIYNPPVERIIESIKKFAGL-GLDNII 86 usage_00136.pdb 60 DIYNPPVERIIESIKKFAGL-GLDNII 85 usage_00386.pdb 59 NIWDKNLIDNLKRAIETYASLGLEIQI 85 usage_00573.pdb 58 NIWDKNLIDNLKRAIETYASLGLEIQI 84 I gl i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################