################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:15 2021 # Report_file: c_1141_64.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00078.pdb # 2: usage_00082.pdb # 3: usage_00142.pdb # 4: usage_00155.pdb # 5: usage_00156.pdb # 6: usage_00608.pdb # # Length: 81 # Identity: 3/ 81 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 81 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 81 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 --KLCAQLHAACLCSDYKTALKLNDLLMPLNRAVFIEPSPAGIKYAAAKLGLCGTIVRSP 58 usage_00082.pdb 1 --KLFADMCRAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLP 58 usage_00142.pdb 1 ----------------AEEAKRLDATFQPLWALFKEFGSIRVIYAAANILSLTVSEPPRP 44 usage_00155.pdb 1 --ALYGQMQTATLQGDFREALRIHDLLAPLHEALFREPSPAGAKYAASLLGLCNEECRLP 58 usage_00156.pdb 1 --ALYGQMQTATLQGDFREALRIHDLLAPLHEALFREPSPAGAKYAASLLGLCNEECRLP 58 usage_00608.pdb 1 IPKEFQALYDAQQSGLD--IQDQFKPIGTLLSALSVDINPIPIKALTSYLGFGNYELRLP 58 a pl sp k a Lg r P usage_00078.pdb 59 IVPLSDTTKKIIDEALYHAG- 78 usage_00082.pdb 59 LVPLTENGQAKVRAALKASG- 78 usage_00142.pdb 45 ILPLTSAERQRVEEALEALS- 64 usage_00155.pdb 59 IVPLSEQTKSDIKNIINEL-- 77 usage_00156.pdb 59 IVPLSEQTKSDIKNIINELYR 79 usage_00608.pdb 59 LVSLEDTDTKVLRETYDTFK- 78 vpL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################