################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:15 2021 # Report_file: c_1368_91.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00093.pdb # 4: usage_00112.pdb # 5: usage_00421.pdb # 6: usage_00422.pdb # 7: usage_00478.pdb # 8: usage_00836.pdb # 9: usage_00878.pdb # 10: usage_00924.pdb # 11: usage_00976.pdb # # Length: 43 # Identity: 4/ 43 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 43 ( 51.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 43 ( 48.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00026.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00093.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00112.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00421.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00422.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00478.pdb 1 -LNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQTG 32 usage_00836.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 usage_00878.pdb 1 --------LEPHIDA--RTMEIHHTKHHQTYVDNANKALEGT- 32 usage_00924.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQTG 33 usage_00976.pdb 1 TLNDFNLVAMKYNYEPL----------TQDHVDILGPLSAQT- 32 amkynye tQdhVDilgplsaqT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################