################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:13 2021 # Report_file: c_1369_36.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00055.pdb # 2: usage_00432.pdb # 3: usage_00433.pdb # 4: usage_00434.pdb # 5: usage_00435.pdb # 6: usage_00441.pdb # 7: usage_00442.pdb # 8: usage_01392.pdb # 9: usage_01393.pdb # 10: usage_01394.pdb # # Length: 55 # Identity: 20/ 55 ( 36.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 55 ( 56.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 55 ( 43.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 55 usage_00432.pdb 1 -----------RRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSL- 43 usage_00433.pdb 1 ---------ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKS-- 44 usage_00434.pdb 1 -----------RRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSL- 43 usage_00435.pdb 1 ---------ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKS-- 44 usage_00441.pdb 1 -----------RRRNKMTAYITELSDMVPTCSA------KLTILRMAVSHMKSL- 37 usage_00442.pdb 1 ---------ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKS-- 44 usage_01392.pdb 1 -------------RNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSL- 41 usage_01393.pdb 1 ----------------MTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSL- 38 usage_01394.pdb 1 ------------RRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSL- 42 MtayItELsdmVPTCsA KLTiLRMAVsHMKs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################