################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:11 2021 # Report_file: c_0803_6.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00020.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00049.pdb # 7: usage_00050.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # 12: usage_00100.pdb # # Length: 84 # Identity: 21/ 84 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 84 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 84 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 PVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIK-------------LVPAADALV 47 usage_00018.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALV 60 usage_00020.pdb 1 ELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVY 60 usage_00036.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIK-------------LVPAADALV 47 usage_00037.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALV 60 usage_00049.pdb 1 DLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVT 60 usage_00050.pdb 1 DLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVT 60 usage_00061.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALV 60 usage_00062.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALV 60 usage_00063.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALV 60 usage_00064.pdb 1 PVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALV 60 usage_00100.pdb 1 PVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQ------------PLVPAADALV 48 K AS ERA RR q G nfE L I L A DA usage_00017.pdb 48 LDSTTLSIEQVIEKALQYARQK-- 69 usage_00018.pdb 61 LDSTTLSIEQVIEKALQYARQK-- 82 usage_00020.pdb 61 LDTTGLNIQEVVEKIKAEAEKRM- 83 usage_00036.pdb 48 LDSTTLSIEQVIEKALQYARQK-- 69 usage_00037.pdb 61 LDSTTLSIEQVIEKALQYA----- 79 usage_00049.pdb 61 LDTTGKSIEEVTDEILAMVSQI-- 82 usage_00050.pdb 61 LDTTGKSIEEVTDEILAMVSQI-- 82 usage_00061.pdb 61 LDSTTLSIEQVIEKALQYARQKLA 84 usage_00062.pdb 61 LDSTTLSIEQVIEKALQYARQK-- 82 usage_00063.pdb 61 LDSTTLSIEQVIEKALQYARQKLA 84 usage_00064.pdb 61 LDSTTLSIEQVIEKALQYARQKL- 83 usage_00100.pdb 49 LDSTSMSIEQVIEQALAYAQRI-- 70 LD T sIe V l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################