################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:04 2021 # Report_file: c_0466_6.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00009.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00041.pdb # 8: usage_00043.pdb # 9: usage_00044.pdb # 10: usage_00046.pdb # # Length: 88 # Identity: 15/ 88 ( 17.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 88 ( 81.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 88 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00002.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00009.pdb 1 PKAPDYLT--LEPLDIGFGAIVEHCKDLRRLSL--SGLLTDKVFEYIGTYAKKMEMLSVA 56 usage_00037.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00038.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00039.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00041.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00043.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00044.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 usage_00046.pdb 1 -HMDLSNSVI---EVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLA-KNSNLVRLNLS 54 hmdlsns evstlhgIlsqCskLqnLSL l rLsDpivntla knsnlvrLnls usage_00001.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNL-- 79 usage_00002.pdb 55 GCSGF-SEFALQTLLSSCSRLDELN--- 78 usage_00009.pdb 57 FA--GDSDLGMHHVLSGCDSLRKLEIRD 82 usage_00037.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNL-- 79 usage_00038.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNL-- 79 usage_00039.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNL-- 79 usage_00041.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNLS- 80 usage_00043.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNLS- 80 usage_00044.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNLS- 80 usage_00046.pdb 55 GCSGF-SEFALQTLLSSCSRLDELNL-- 79 gc f SefalqtlLSsCsrLdeLn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################