################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:00 2021 # Report_file: c_0589_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00005.pdb # 2: usage_00016.pdb # 3: usage_00051.pdb # 4: usage_00057.pdb # 5: usage_00074.pdb # 6: usage_00075.pdb # 7: usage_00076.pdb # 8: usage_00077.pdb # 9: usage_00078.pdb # 10: usage_00079.pdb # 11: usage_00100.pdb # # Length: 107 # Identity: 10/107 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/107 ( 19.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/107 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00016.pdb 1 KKIKIGFDATFVPGYEEKD-----------GSYIGFDIDLANAVFKLYGIDVEWQAI-D- 47 usage_00051.pdb 1 -ELRVGLEPGYLPFEKDKK-----------GNVIGFDVDLARE-AKA-GVKLKLVPT-S- 44 usage_00057.pdb 1 --YIVSSLL-EEPYLSLKQYTYGESLVGND-RFEGYCKDLADMLAAQLGIKYEIRLVQDG 56 usage_00074.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00075.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00076.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00077.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00078.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00079.pdb 1 --VVVGTDAAFAPFEYMQK-----------GKIVGFDVDLLDAVMKAAGLDYELKNI-G- 45 usage_00100.pdb 1 KELVVGTDTSFMPFEFKQG-----------DKYVGFDLDLWAEIAKGAGWTYKIQPM-D- 47 vg P Gfd DL k G usage_00005.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00016.pdb 48 -------------WD-KETELKNGTIDLIWNGYSVTDERKQSADFTE 80 usage_00051.pdb 45 -------------WDGLIPGLVTEKFDIIISG-TISQERNLRVNFVE 77 usage_00057.pdb 57 NYGAENQYAPGGW-DGMVGELIRKEADIAISAMTITAERERVIDFSK 102 usage_00074.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00075.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00076.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00077.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00078.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00079.pdb 46 -------------WDPLFASLQSKEVDMGISGITITDERKQSYDFSD 79 usage_00100.pdb 48 -------------FAGLIPALQTQNIDVALSGMTIKEERRKAIDFSD 81 d L D sg ti ER dF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################