################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:49:52 2021 # Report_file: c_0127_1.html ################################################################################################ #==================================== # Aligned_structures: 63 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00008.pdb # 8: usage_00009.pdb # 9: usage_00010.pdb # 10: usage_00011.pdb # 11: usage_00012.pdb # 12: usage_00013.pdb # 13: usage_00015.pdb # 14: usage_00016.pdb # 15: usage_00017.pdb # 16: usage_00023.pdb # 17: usage_00024.pdb # 18: usage_00025.pdb # 19: usage_00027.pdb # 20: usage_00029.pdb # 21: usage_00030.pdb # 22: usage_00031.pdb # 23: usage_00039.pdb # 24: usage_00041.pdb # 25: usage_00048.pdb # 26: usage_00049.pdb # 27: usage_00050.pdb # 28: usage_00051.pdb # 29: usage_00054.pdb # 30: usage_00055.pdb # 31: usage_00057.pdb # 32: usage_00062.pdb # 33: usage_00063.pdb # 34: usage_00069.pdb # 35: usage_00070.pdb # 36: usage_00071.pdb # 37: usage_00084.pdb # 38: usage_00085.pdb # 39: usage_00086.pdb # 40: usage_00087.pdb # 41: usage_00088.pdb # 42: usage_00089.pdb # 43: usage_00090.pdb # 44: usage_00091.pdb # 45: usage_00092.pdb # 46: usage_00093.pdb # 47: usage_00094.pdb # 48: usage_00095.pdb # 49: usage_00096.pdb # 50: usage_00097.pdb # 51: usage_00099.pdb # 52: usage_00102.pdb # 53: usage_00103.pdb # 54: usage_00104.pdb # 55: usage_00105.pdb # 56: usage_00106.pdb # 57: usage_00107.pdb # 58: usage_00108.pdb # 59: usage_00112.pdb # 60: usage_00113.pdb # 61: usage_00114.pdb # 62: usage_00115.pdb # 63: usage_00116.pdb # # Length: 114 # Identity: 22/114 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/114 ( 23.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/114 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 LTQPPSASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 58 usage_00003.pdb 1 ----PSASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 54 usage_00004.pdb 1 ----PSASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 54 usage_00005.pdb 1 ----PSASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 54 usage_00006.pdb 1 LTQPPSASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 58 usage_00007.pdb 1 -----SASGSPGQRVTISCSGSSSNIG-S-YTVNWYQQLPGTAPKLLIYSLNQRPSGVPD 53 usage_00008.pdb 1 -----SVSAAPGQKVTISCSGSTSNIG-N-NYVSWYQQHPGKAPKLMIYDVSKRPSGVPD 53 usage_00009.pdb 1 ----PSASGTPGQRVAISCSGSNSNIG-S-NTVHWYQQLPGAAPKLLIYSNNQRPSGVPD 54 usage_00010.pdb 1 ----PSASGTPGQRVTISCSGSSSNIG-E-NSVTWYQHLSGTAPKLLIYEDNSRASGVSD 54 usage_00011.pdb 1 ----PSASGTPGQRVTISCSGSSSNIG-E-NSVTWYQHLSGTAPKLLIYEDNSRASGVSD 54 usage_00012.pdb 1 ----PSVSGTPGQKVTIFCSGSSSNVE-D-NSVYWYQQFPGTTPKVLIYNDDRRSSGVPD 54 usage_00013.pdb 1 ----PSVSGTPGQKVTIFCSGSSSNVE-D-NSVYWYQQFPGTTPKVLIYNDDRRPSGVPD 54 usage_00015.pdb 1 -----SVSEAPRQTVTISCSGNSFNIG-R-YPVNWYQQLPGKAPKLLIYYNNLRFSGVSD 53 usage_00016.pdb 1 ----PSASGTPGQRVTISCTGSATDIG-S-NSVIWYQQVPGKAPKLLIYYNDLLPSGVSD 54 usage_00017.pdb 1 ----LSAPGTPGQRVTISCSGSSSNVG-T-NAVDWYQRLPGTAPKLLIYYNNQRPSGVPD 54 usage_00023.pdb 1 ----SSVSGSLGQRVSITCSGSSSNVG-N-GYVSWYQLIPGSAPRTLIYGDTSRASGVPD 54 usage_00024.pdb 1 ----SSVSGSLGQRVSITCSGSSSNVG-N-GYVSWYQLIPGSAPRTLIYGDTSRASGVPD 54 usage_00025.pdb 1 ----SSVSGSLGQRVSITCSGSSSNVG-N-GYVSWYQLIPGSAPRTLIYGDTSRASGVPD 54 usage_00027.pdb 1 ----PSASGTPGQRVTISCSGTSSNIG-S-STVNWYQQLPGMAPKLLIYRDAMRPSGVPD 54 usage_00029.pdb 1 -----SVSGTPGQRVTISCSGSSSNIG-S-NTVNWYQQLPGTAPKLLIYGNNQRPSGVPD 53 usage_00030.pdb 1 -----SVSGTPGQRVTISCSGSSSNIG-S-NTVNWYQQLPGTAPKLLIYGNNQRPSGVPD 53 usage_00031.pdb 1 -----SVSGAPGQRVTISCTGSSSNIGSG-YDVHWYQQLPGTAPKLLIYGNSKRPSGVPD 54 usage_00039.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00041.pdb 1 -----SASGTPGQRVTISCSGSSSNIG-S-NYVYWYQQLPGTAPKLLIYRNNQRPSGVPD 53 usage_00048.pdb 1 -----SVSGAPGQRVTIPCTGGSSNIGAG-YSVHWYQQLPGTAPKLLIYGSNSRPSGVPD 54 usage_00049.pdb 1 -----SVSGAPGQKVTISCTGSSSNIG-G-YDVHWYQQLPGMAPKLLIYDNNERPSGISD 53 usage_00050.pdb 1 -----SVSAAPRQRVTISVSGSNSNIG-S-NTVNWIQQLPGRAPELLMYDDDLLAPGVSD 53 usage_00051.pdb 1 -----SVSAAPRQRVTISVSGSNSNIG-S-NTVNWIQQLPGRAPELLMYDDDLLAPGVSD 53 usage_00054.pdb 1 ----PSASGTPGQRVTISCSGNSSNIE-N-NYVYWYQQLPGSTPKLLIFRDDQRPSGVPD 54 usage_00055.pdb 1 ----PSASGTPGQRVTISCSGNSSNIE-N-NYVYWYQQLPGSTPKLLIFRDDQRPSGVPD 54 usage_00057.pdb 1 ----PSASGTPGQRVTISCSGSSSNIG-E-NSVTWYQHLSGTAPKLLIYEDNSRASGVSD 54 usage_00062.pdb 1 ----PSASGTPGQRVTISCSGSSSNIG-G-NTVNWYQQVPGTAPRLLIYKNNQRPSGVPD 54 usage_00063.pdb 1 -----SVSGTPGQRVTISCSGSSSNIG-S-NTVNWYQQLPGTAPKLLIYGNNQRPSGVPD 53 usage_00069.pdb 1 -----SVSGAPGQRVTISCSGSSSNIG-S-NYVSWYQQKPGTAPKLLIYDNNQRPSGVPD 53 usage_00070.pdb 1 -----SVSAAPGQKVTISCSGSTSNIG-N-NYVSWYQQHPGKAPKLMIYDVSKRPSGVPD 53 usage_00071.pdb 1 -----SVSGAPGQRVSISCTGRSSNIGAG-YDVHWYQQLPGKAPKLLIYGNTNRPSGVPV 54 usage_00084.pdb 1 -----SASGTPGQSVTISCSGSGSNIG-N-NKVNWYQQLPGTAPKLLIYSNNQRPSGVPD 53 usage_00085.pdb 1 -----SASGTPGQSVTISCSGSGSNIG-N-NKVNWYQQLPGTAPKLLIYSNNQRPSGVPD 53 usage_00086.pdb 1 -----SASGTPGQSVTISCSGSGSNIG-N-NKVNWYQQLPGTAPKLLIYSNNQRPSGVPD 53 usage_00087.pdb 1 -----SASGTPGQSVTISCSGSGSNIG-N-NKVNWYQQLPGTAPKLLIYSNNQRPSGVPD 53 usage_00088.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00089.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00090.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00091.pdb 1 LTQPPSASGTPGQRVTISCSGSSSNIG-T-NYVYWYQQFPGTAPKLLIYRSYQRPSGVPD 58 usage_00092.pdb 1 LTQPPSASGTPGQRVTISCSGSSSNIG-T-NYVYWYQQFPGTAPKLLIYRSYQRPSGVPD 58 usage_00093.pdb 1 LTQPPSASGTPGQRVTISCSGSSSNIG-T-NYVYWYQQFPGTAPKLLIYRSYQRPSGVPD 58 usage_00094.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00095.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00096.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00097.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00099.pdb 1 ----PSVSGAPRQRVTISCSGNSSNIG-N-NAVNWYQQLPGKAPKLLIYYDDQLPSGVSD 54 usage_00102.pdb 1 ----PSVSEAPGQRVTIACSGSSSNIG-N-NAVSWYQQLPGKAPTLLIYYDNLLPSGVSD 54 usage_00103.pdb 1 -----SVSGAPGQRVTISCTGSSSNIGAG-YDVHWYQQLPGTAPKLLISGNSNRPSGVPD 54 usage_00104.pdb 1 -----SVSGAPGQRVTISCSGSSSNIG-S-NYVSWYQQLPGTAPKLLIYDNNQRPSGVPD 53 usage_00105.pdb 1 -----SVSGAPGQRVTISCSGSSSNIG-S-NYVSWYQQLPGTAPKLLIYDNNQRPSGVPD 53 usage_00106.pdb 1 ----PSASGTPGQRVTISCSGSSSNIG-S-NYVYWYQQLPGTAPKLLIYRNNQRPSGVPD 54 usage_00107.pdb 1 ----PSVSGTPGQGVTISCSGGSSNIG-S-NPVNWYQMVPGTAPKLLLYTNNQRPSGVPD 54 usage_00108.pdb 1 -----AVSGTPGQRVTISCSGSDSNIG-R-RSVNWYQQFPGTAPKLLIYSNDQRPSVVPD 53 usage_00112.pdb 1 ----PSVSGAPGQRVSISCTGRSSNIG-AGYDVHWYQQLPGKAPKLLIYGNTNRPSGVPV 55 usage_00113.pdb 1 -----SVSGAPGQRVSISCTGRSSNIGAG-YDVHWYQQLPGKAPKLLIYGNTNRPSGVPV 54 usage_00114.pdb 1 -----SVSGAPGQRVTISCTGSSSNIGAH-YDVHWYQQLPGTAPKLLIYGNSNRPSGVPD 54 usage_00115.pdb 1 -----SVSGAPGQRVTISCTGSSSNIGAH-YDVHWYQQLPGTAPKLLIYGNSNRPSGVPD 54 usage_00116.pdb 1 -----SVSGAPGQRVTISCTGSSSNIGAH-YDVHWYQQLPGTAPKLLIYGNSNRPSGVPD 54 s Q V I G n V W Q G P v usage_00002.pdb 59 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLTV--- 107 usage_00003.pdb 55 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLTV--- 103 usage_00004.pdb 55 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLTV--- 103 usage_00005.pdb 55 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLT---- 102 usage_00006.pdb 59 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLT---- 106 usage_00007.pdb 54 RFSGSKSGTSASLAISGLQSEDEAVYYCAAWDDSLSAHVVF--GGGTKLT---- 101 usage_00008.pdb 54 RFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFG--TGTKLT----- 100 usage_00009.pdb 55 RFSGSNSGTSASLAISRLQSEDEADYYCAAWDDSLNGVVFG--GGTKVTV---- 102 usage_00010.pdb 55 RFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVFG--TGTKVTV---- 102 usage_00011.pdb 55 RFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVFG--TGTKVTV---- 102 usage_00012.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCLSWDDSLNGWVFG--GGTKVTV---- 102 usage_00013.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCLSWDDSLNGWVFG--GGTKVTV---- 102 usage_00015.pdb 54 RFSGSKSGTSASLAIRDLLSEDEADYYCSTWDDTLKGWVFG--GGTKVTV---- 101 usage_00016.pdb 55 RFSASKSGTSASLAISGLESEDEADYYCAAWNDSLDEPGFG--GGTKLTVL-G- 104 usage_00017.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCATWDNSLNDRVFG--GGTKLTVL--- 103 usage_00023.pdb 55 RFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--SGTTLTV---- 102 usage_00024.pdb 55 RFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--SGTTLTVL-G- 104 usage_00025.pdb 55 RFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--SGTTLTVL-G- 104 usage_00027.pdb 55 RFSGSKSGASASLAIGGLQSEDETDYYCAAWDVSLNAYVFG--TGTKVTV---- 102 usage_00029.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPVFG--GGTKLTV---- 101 usage_00030.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPVFG--GGTKLTV---- 101 usage_00031.pdb 55 RFSGSKSGTSASLAITGLQSEDEADYYCASWTDGLSLVVFG--GGTKLTV---- 102 usage_00039.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00041.pdb 54 RFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSAWVFG--GGTQLDI---- 101 usage_00048.pdb 55 RFSGSKSGTSASLAITGLRPEDEADYYCQSYDSSLSGSQVF--GAGTRVTVLG- 105 usage_00049.pdb 54 RFSGSKSATSASLAITGLQTEDEADYYCQSYDSSLNAWVFG--GGTRLTV---- 101 usage_00050.pdb 54 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDSLNGWVFG--GGTKVTVL-SA 104 usage_00051.pdb 54 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDSLNGWVFG--GGTKVTV---- 101 usage_00054.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCASWDDSRGGPDYVFGTGTKVTV---- 104 usage_00055.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCASWDDSRGGPDYVFGTGTKVT----- 103 usage_00057.pdb 55 RFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVFG--TGTKVTV---- 102 usage_00062.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCEAWDGGLRGGVFG--GGTKLTV---- 102 usage_00063.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPVFG--GGTKLTV---- 101 usage_00069.pdb 54 RFSGSKSGTSAVLAITGLQSEDEADYYCQSRDISQYVFG----GGTKLTV---- 99 usage_00070.pdb 54 RFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFG--TGTKLTV---- 101 usage_00071.pdb 55 RFSGSMSGTSASLAITGLQAEDEADYYCQSYDRSLSGSVFG--GGTKLTVL-G- 104 usage_00084.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDGLSGYVFG--TGTKLTV---- 101 usage_00085.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDGLSGYVFG--TGTKLTV---- 101 usage_00086.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDGLSGYVFG--TGTKLTV---- 101 usage_00087.pdb 54 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDGLSGYVFG--TGTKLTV---- 101 usage_00088.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTVL--- 102 usage_00089.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00090.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00091.pdb 59 RFSGSKSGSSASLAISGLQSEDEADYYCATWDDSLDGWVFG--GGTKLTV---- 106 usage_00092.pdb 59 RFSGSKSGSSASLAISGLQSEDEADYYCATWDDSLNGWVFG--GGTKLTV---- 106 usage_00093.pdb 59 RFSGSKSGSSASLAISGLQSEDEADYYCATWDDSLNGWVFG--GGTKLTV---- 106 usage_00094.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00095.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00096.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00097.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00099.pdb 55 RFSGSRSGTSASLAIRGLQSEDEADYYCTSWDDSLDSQLFG--GGTRLTV---- 102 usage_00102.pdb 55 RFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNDWVFG--GGTKVTVL-A- 104 usage_00103.pdb 55 RFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFG--GGTKLTV---- 102 usage_00104.pdb 54 RFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFG--GGTKLTV---- 101 usage_00105.pdb 54 RFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFG--GGTKLTV---- 101 usage_00106.pdb 55 RFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSAWVFG--GGTQLDIL-G- 104 usage_00107.pdb 55 RFSGSKSGTSASLAINGLQSEDEADYYCAVWDDSLSGRWVF--GGGTKVTV--- 103 usage_00108.pdb 54 RFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFG--GGTQLTV---- 101 usage_00112.pdb 56 RFSGSMSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFG--GGTKLTVL-G- 105 usage_00113.pdb 55 RFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLRGSVFG--GGTKLTV---- 102 usage_00114.pdb 55 RFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGYVFG--TGTKVTV---- 102 usage_00115.pdb 55 RFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGYVFG--TGTKVTV---- 102 usage_00116.pdb 55 RFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGYVFG--TGTKVTV---- 102 RFS S Sg A L I L EDE Y g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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