################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:23:09 2021 # Report_file: c_0628_4.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00010.pdb # 6: usage_00019.pdb # 7: usage_00027.pdb # 8: usage_00035.pdb # 9: usage_00037.pdb # 10: usage_00038.pdb # 11: usage_00039.pdb # 12: usage_00043.pdb # 13: usage_00046.pdb # 14: usage_00047.pdb # 15: usage_00055.pdb # 16: usage_00056.pdb # 17: usage_00058.pdb # 18: usage_00059.pdb # 19: usage_00060.pdb # 20: usage_00062.pdb # 21: usage_00066.pdb # 22: usage_00075.pdb # 23: usage_00076.pdb # 24: usage_00078.pdb # 25: usage_00079.pdb # 26: usage_00083.pdb # 27: usage_00093.pdb # 28: usage_00095.pdb # 29: usage_00102.pdb # 30: usage_00103.pdb # 31: usage_00104.pdb # 32: usage_00105.pdb # # Length: 111 # Identity: 31/111 ( 27.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/111 ( 35.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/111 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00006.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00007.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00008.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00010.pdb 1 -LQQFKNMIQCAG--TR-TWTAYINYGCYCGKGGSGTPVDKLDRCCYTHDHCYNQADSIP 56 usage_00019.pdb 1 -LINFMEMIRYTIPCEK-TWGEYADYGCYCGAGGSGRPIDALDRCCYVHDNCYGDAEKKH 58 usage_00027.pdb 1 NTYQFRNMIECTV-PSR-SWWDFADYGCYCG-CGSGTPTDDLDRCCQVHCNCYRQAGEIS 57 usage_00035.pdb 1 NLYQFKNMIQCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00037.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00038.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00039.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00043.pdb 1 NRWQFKNMISCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00046.pdb 1 -LQQFKNMIQCAG--TR-TWTAYINYGCYCGKGGSGTPVDKLDRCCYTHDHCYNQADSIP 56 usage_00047.pdb 1 -LQQFKNMIQCAG--TR-TWTAYINYGCYCGKGGSGTPVDKLDRCCYTHDHCYNQADSIP 56 usage_00055.pdb 1 -TYQFKNMIQCTV-PKR-SWWDFADYGCYCGRGGSGTPIDDLDRCCQVHDNCYNSAREQG 57 usage_00056.pdb 1 NRWQFKNMISCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00058.pdb 1 HLIQFGNMIQCTV-PGFLSWIKYADYGCYCGAGGSGTPVDKLDRCCQVHDNCYTQAQKLP 59 usage_00059.pdb 1 HLIQFGNMIQCTV-PGFLSWIKYADYGCYCGAGGSGTPVDKLDRCCQVHDNCYTQAQKLP 59 usage_00060.pdb 1 NLIQFGNMIQCANKGSR-PSLDYADYGCYCGWGGSGTPVDELDRCCQVHDNCYEQAGKKG 59 usage_00062.pdb 1 NLYQFKNMIQCTV-PSR-SWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENIS 58 usage_00066.pdb 1 NLYQFKNMIKCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00075.pdb 1 -LVQFSYLIQCANHGRR-PTRHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKKG 58 usage_00076.pdb 1 -LVQFSYLIQCANHGRR-PTRHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKKG 58 usage_00078.pdb 1 NRWQFKNMISCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 58 usage_00079.pdb 1 -IYQFKNMIECTV-PAR-SWWDFADYGCYCGGGGSGTPTDDLDRCCQVHDNCYNQAQEIT 57 usage_00083.pdb 1 NLYQFKNMIQCTV-PSR-SWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENIS 58 usage_00093.pdb 1 -LYQFKNMIQCTV-PSR-SWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENIS 57 usage_00095.pdb 1 -LYQFKNMIQCTV-PSR-SWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKIS 57 usage_00102.pdb 1 NTYQFQNMIQCTV-PKR-SWRDFADYGCYCGRGGSGTPIDDLDSCCQVHDNCYNSAREQG 58 usage_00103.pdb 1 ----------CTV-PSR-SWWDFADYGCYCGRGGSGTPSDDLDRCCQTHDNCYNEAEKIS 48 usage_00104.pdb 1 NLYQFKNMIECTV-PAR-SWWDFADYGCYCGGGGSGTPTDDLDRCCQVHDNCYNQAQEIT 58 usage_00105.pdb 1 NLYQFKNMIQCTV-PSR-SWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENIS 58 c YGCYCG gGSGtP D LDrCC Hd CY A usage_00005.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00006.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00007.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00008.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00010.pdb 57 G-C-----NPNIKTYSYTCTQPNITCTRTADACAKFLCDCDRTAAICFAS- 100 usage_00019.pdb 59 K-C-----NPKTQSYSYKLTKRTIICYGAAGTCARIVCDCDRTAALCFGN- 102 usage_00027.pdb 58 G-C-----RPKFKTYTYQCSGGTLTCKGNNNACAASSCDCDRLAAICFAGA 102 usage_00035.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGGNNACAAAVCDCDRLAAICFAG- 102 usage_00037.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00038.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00039.pdb 59 G-C-----WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAGA 103 usage_00043.pdb 59 G-C-----NPRFRTYSYECTAGTLTCTGRNNACAASVCDCDRLAAICFAGA 103 usage_00046.pdb 57 G-C-----NPNIKTYSYTCTQPNITCTRTADACAKFLCDCDRTAAICFAS- 100 usage_00047.pdb 57 G-C-----NPNIKTYSYTCTQPNITCTRTADACAKFLCDCDRTAAICFAS- 100 usage_00055.pdb 58 G-C-----RPKQKTYSYECKAGTLSCSGSNNSCAATVCDCDRLAAICFAG- 101 usage_00056.pdb 59 G-C-----NPRFRTYSYECTAGTLTCTGRNNACAASVCDCDRLAAICFAGA 103 usage_00058.pdb 60 -ACSSIMDSPYVKIYSYDCSERTVTCKADNDECAAFICNCDRVAAHCFAAS 109 usage_00059.pdb 60 -ACSSIMDSPYVKIYSYDCSERTVTCKADNDECAAFICNCDRVAAHCFAAS 109 usage_00060.pdb 60 --C-----FPKLTLYSWKCTGNVPTCNSK-PGCKSFVCACDAAAAKCFAKA 102 usage_00062.pdb 59 G-C-----RPYFKTYSYECTQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00066.pdb 59 K-C-----WPFFKTYSYKCSQGTLTCKGGNNACAASVCDCDRLAAICFAG- 102 usage_00075.pdb 59 --C-----SPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAK- 101 usage_00076.pdb 59 --C-----SPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAK- 101 usage_00078.pdb 59 G-C-----NPRFRTYSYECTAGTLTCTGRNNACAASVCDCDRLAAICFAGA 103 usage_00079.pdb 58 G-C-----RPKWKTYTYQCTQGTLTCKGRNNACAATTCDCDRLAAICFAG- 101 usage_00083.pdb 59 G-C-----RPYFKTYSYECTQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 usage_00093.pdb 58 G-C-----RPYFKTYSYECTQGTLTCKGDNNACAASVCDCDRLAAICFAGA 102 usage_00095.pdb 58 G-C-----WPYFKTYSYECSQGTLTCKGGNNACAAAVCDCDRLAAICFAGA 102 usage_00102.pdb 59 G-C-----RPKQKTYTYQCKAGGLSCSGANNSCAATTCDCDRLAAICFAG- 102 usage_00103.pdb 49 G-C-----NPRFRTYSYACTAGTLTCTGRNNACAASVCDCDRNAAICFAGA 93 usage_00104.pdb 59 G-C-----RPKWKTYTYQCTQGTLTCKGRNNSCAATTCDCDRLAAICFAG- 102 usage_00105.pdb 59 G-C-----RPYFKTYSYECTQGTLTCKGDNNACAASVCDCDRLAAICFAG- 102 C P Y y c C C C CD AA CFa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################