################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:53 2021 # Report_file: c_0394_6.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00034.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00061.pdb # 8: usage_00062.pdb # 9: usage_00091.pdb # 10: usage_00104.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00130.pdb # 14: usage_00144.pdb # 15: usage_00145.pdb # 16: usage_00164.pdb # # Length: 83 # Identity: 48/ 83 ( 57.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 83 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 83 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------SERMYPEDGALKGEMKMRLRLK-GGHYDAEVKTTYMAKKPVQLPGAYKTDIKLD 53 usage_00034.pdb 1 ------SERMYPEDGALKGEMKMRLRLKDGGHYDAEVKTTYMAKKPVQLPGAYKTDIKLD 54 usage_00056.pdb 1 ------TERLYPRDGVLKGEIHKALKLKGGGHYLCEFKSIYMAKKPVKLPGYYYVDSKLD 54 usage_00057.pdb 1 LGWEPSTERLYPRDGVLKGEIHKALKLKGGGHYLCEFKSIYMAKKPVKLPGYYYVDSKLD 60 usage_00058.pdb 1 MGWEPSTERLYPRDGVLKGEIHKALKLKDGGHYLVEFKSIYMAKKPVQLPGYYYVDSKLD 60 usage_00059.pdb 1 NGWEASTERMYPEDGALKGEINQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVDIKLD 60 usage_00061.pdb 1 -----SSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLD 55 usage_00062.pdb 1 -----SSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLD 55 usage_00091.pdb 1 ----AISERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLD 56 usage_00104.pdb 1 MGWEASTERLYPRDGVLKGEIHKALKLKDGGHYLVEFKSIYMAKKPVQLPGYYYVDSKLD 60 usage_00105.pdb 1 MGWEASTERLYPRDGVLKGEIHKALKLKDGGHYLVEFKSIYMAKKPVQLPGYYYVDSKLD 60 usage_00106.pdb 1 MGWEASTERLYPRDGVLKGEIHKALKLKDGGHYLVEFKSIYMAKKPVQLPGYYYVDSKLD 60 usage_00130.pdb 1 MGWEASSERMYPEDGALKGEMKMRLRLKDGGHYDAEVKTTYMAKKPVQLPGAYKTDTKLD 60 usage_00144.pdb 1 MGAEASSERMYPEDGALKGEIKVRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNANYKLD 60 usage_00145.pdb 1 -----SSERMYPEDGALKGEIKVRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNANYKLD 55 usage_00164.pdb 1 ------SERMYPEDGALKGEMKMRLRLKDGGHYDAEVKTTYMAKKPVQLPGAYKADYKLD 54 ER YP DG LKGE L LK GGHY E K Y AKKPV LPG Y KLD usage_00001.pdb 54 ITSHNEDYTIVEQYERAEG---- 72 usage_00034.pdb 55 ITSHNEDYTIVEQYERAEG---- 73 usage_00056.pdb 55 ITSHNEDYTVVEQYERTEA---- 73 usage_00057.pdb 61 ITSHNEDYTVVEQYERTEA---- 79 usage_00058.pdb 61 ITSHNEDYTIVEQYERAEGR--- 80 usage_00059.pdb 61 ITSHNEDYTIVEQYERAEG---- 79 usage_00061.pdb 56 ITSHNEDYTIVEQYERAEGRHST 78 usage_00062.pdb 56 ITSHNEDYTIVEQYERAEG---- 74 usage_00091.pdb 57 ITSHNEDYTIVEQYERAEG---- 75 usage_00104.pdb 61 ITSHNEDYTIVEQYERTEG---- 79 usage_00105.pdb 61 ITSHNEDYTIVEQYERTEG---- 79 usage_00106.pdb 61 ITSHNEDYTIVEQYERTEGR--- 80 usage_00130.pdb 61 ITSHNEDYTIVEQYERNEG---- 79 usage_00144.pdb 61 ITSHNEDYTIVEQYERCEG---- 79 usage_00145.pdb 56 ITSHNEDYTIVEQYERCEG---- 74 usage_00164.pdb 55 ITSHNEDYTIVEQYERCEG---- 73 ITSHNEDYT VEQYER E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################