################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:08 2021 # Report_file: c_0461_94.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00021.pdb # 2: usage_00174.pdb # 3: usage_00175.pdb # 4: usage_00452.pdb # 5: usage_00563.pdb # 6: usage_00564.pdb # # Length: 100 # Identity: 21/100 ( 21.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/100 ( 21.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/100 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 PKLVLFTSEQSHYSIKKAGAALGFGTDNVI-LIKCNERGKIIPADFEAKILEAKQKGYVP 59 usage_00174.pdb 1 --LRIVCSKKSHFTVQKSASWG-LGEKA--VTVDANADGT-DITKLDEVIAQAKAEGLIP 54 usage_00175.pdb 1 --LRIVCSKKSHFTVQKSASWG-LGEKA--VTVDANADGT-DITKLDEVIAQAKAEGLIP 54 usage_00452.pdb 1 --LVLFTSEQSHYSIKKAGAALGFGTDNVI-LIKCNERGKIIPADFEAKILEAKQKGYVP 57 usage_00563.pdb 1 -PLALFTSKECHYSIQKGAAFLGLGTDSVR-VVKADERGKMVPEDLERQIGMAEAEGAVP 58 usage_00564.pdb 1 -PLALFTSKECHYSIQKGAAFLGLGTDSVR-VVKADERGKMVPEDLERQIGMAEAEGAVP 58 L S H K G G I A G P usage_00021.pdb 60 FYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA---- 95 usage_00174.pdb 55 FAIVGTAGTTDHGAIDDLDFIADAVKHDW-------HVDG 87 usage_00175.pdb 55 FAIVGTAGTTDHGAIDDLDFIADAVKHDW-------HVDG 87 usage_00452.pdb 58 FYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA---- 93 usage_00563.pdb 59 FLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDA---- 94 usage_00564.pdb 59 FLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDA---- 94 F T GTT GA D IAD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################