################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:07:51 2021 # Report_file: c_0207_7.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00010.pdb # 2: usage_00014.pdb # 3: usage_00018.pdb # 4: usage_00023.pdb # 5: usage_00029.pdb # 6: usage_00030.pdb # 7: usage_00049.pdb # 8: usage_00062.pdb # 9: usage_00068.pdb # 10: usage_00092.pdb # 11: usage_00110.pdb # 12: usage_00117.pdb # 13: usage_00118.pdb # 14: usage_00119.pdb # 15: usage_00132.pdb # 16: usage_00144.pdb # 17: usage_00149.pdb # 18: usage_00150.pdb # 19: usage_00153.pdb # 20: usage_00158.pdb # 21: usage_00184.pdb # 22: usage_00200.pdb # 23: usage_00201.pdb # 24: usage_00206.pdb # 25: usage_00214.pdb # # Length: 115 # Identity: 26/115 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/115 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/115 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -IELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRF 59 usage_00014.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00018.pdb 1 --VMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 58 usage_00023.pdb 1 -VVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRF 59 usage_00029.pdb 1 DVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00030.pdb 1 -VVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRF 59 usage_00049.pdb 1 DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLA 60 usage_00062.pdb 1 -IVMTQTPLSLPVTPGQPASISCRSSQSLVHSNGNTYLHWYLQKPGQSPQLLIYKVSNRF 59 usage_00068.pdb 1 DVVVTQTPLSLPVSLGDQASISCRSSQSIVHSNGNSYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00092.pdb 1 --LMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 58 usage_00110.pdb 1 --VMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRF 58 usage_00117.pdb 1 --LMTQSPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPNLLIYKVSNRF 58 usage_00118.pdb 1 --LMTQSPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPNLLIYKVSNRF 58 usage_00119.pdb 1 --LMTQSPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPNLLIYKVSNRF 58 usage_00132.pdb 1 -VLLTQTPLSLPVSLGEQASISCRSSQSIVHSIGDTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00144.pdb 1 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRF 60 usage_00149.pdb 1 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRF 60 usage_00150.pdb 1 DIVMTQAAFSNPVTLGTSASISCRSSKSLLHSDGITYLYWYLQKPGQSPHLLIYHLSNLA 60 usage_00153.pdb 1 --VMTQTPLSLPVSLGDQASISCRSSQTIVHSNGYTYLDWYLQKPGQSPKLLIYKVSNRF 58 usage_00158.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHRNGNTYLHWYLQKPGQSPKLLIHKVSNRF 59 usage_00184.pdb 1 NIVLTQSPVSLAVSLGQRATISCRASESVDG-YGNSFLHWFQQKPGQPPKLLIYLASNLN 59 usage_00200.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVANRF 59 usage_00201.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00206.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00214.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDIK-----KYLNWYHQKPGKVPELLMHDASNLE 53 TQ v G IsC S yL W Q pGq P l s usage_00010.pdb 60 SGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSG-TKLEI--- 110 usage_00014.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLEL--- 110 usage_00018.pdb 59 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGSHFPYTFGGG-TKLEIKRA 112 usage_00023.pdb 60 YGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGG-TKLE---- 109 usage_00029.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLE---- 110 usage_00030.pdb 60 YGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGG-TKL----- 108 usage_00049.pdb 61 SGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSG-TKLEIKRA 114 usage_00062.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCSQSTHVPWTFGQG-TKVEIKRT 113 usage_00068.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPPTFGGG-TKLEI--- 111 usage_00092.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLEL--- 109 usage_00110.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGG-TK------ 106 usage_00117.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLELKRA 112 usage_00118.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLELKRA 112 usage_00119.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLELKRA 112 usage_00132.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPYTFGGG-TKLEIKRA 113 usage_00144.pdb 61 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAG-TKLEL--- 111 usage_00149.pdb 61 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAG-TKLEL--- 111 usage_00150.pdb 61 SGVPDRFSSSGSGTDFTLRISRVEAEDVGIYYCAHNVELPRTFGGG-TKL----- 109 usage_00153.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSG-TKLEIKRA 112 usage_00158.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGA-GTKLE--- 110 usage_00184.pdb 60 SGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNVDPWTFGGG-TKLEIKRA 113 usage_00200.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPWTFGGG-TKLEIKRA 113 usage_00201.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGSHFPYTFGGG-TKLEIKRA 113 usage_00206.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPLTFGAG-TKLE---- 109 usage_00214.pdb 54 TGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRT 108 GVP RF gsGSgTdFTL is v aeD g Y C q P g tk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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