################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:16 2021 # Report_file: c_1489_294.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_01454.pdb # 2: usage_01455.pdb # 3: usage_01833.pdb # 4: usage_02691.pdb # 5: usage_02692.pdb # 6: usage_03358.pdb # 7: usage_03590.pdb # 8: usage_03632.pdb # 9: usage_04006.pdb # 10: usage_04007.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 42 ( 4.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 42 ( 59.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01454.pdb 1 ---------PAHARILLMLAL-TRT---S-DPKVIQEYFHT- 27 usage_01455.pdb 1 ---------PAHARILLMLAL-TRT---S-DPKVIQEYFHT- 27 usage_01833.pdb 1 N--------PQKARVLLQLAL-TQT---K-DPQQIQQIFNQ- 28 usage_02691.pdb 1 S--------PAKSRILLMLAL-TKT---T-NPAVIQDYFHAY 29 usage_02692.pdb 1 S--------PAKSRILLMLAL-TKT---T-NPAVIQDYFHA- 28 usage_03358.pdb 1 N--------PQKARVLLQLAL-TQT---K-DPQQIQQIFNQ- 28 usage_03590.pdb 1 -SPDQVRSVAPALEQYTQQRLYGDV---WQ-------R---- 27 usage_03632.pdb 1 S--------KQEWATIGAYIQ-TGLGLPV--NEQQLRTH--- 28 usage_04006.pdb 1 ---------PQKARVLLQLAL-TQT---K-DPQQIQQIFNQ- 27 usage_04007.pdb 1 ---------PQKARVLLQLAL-TQT---K-DPQQIQQIFNQ- 27 l t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################