################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:19 2021 # Report_file: c_1256_274.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00520.pdb # 2: usage_01219.pdb # 3: usage_01645.pdb # 4: usage_01646.pdb # 5: usage_02010.pdb # 6: usage_02400.pdb # 7: usage_02463.pdb # 8: usage_02466.pdb # 9: usage_02472.pdb # 10: usage_02877.pdb # 11: usage_03131.pdb # 12: usage_03138.pdb # 13: usage_03300.pdb # 14: usage_04044.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 51 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 51 ( 56.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00520.pdb 1 -NFIEMN-AS--DERGIDVVRHKIKEFARTAPIGGA-----PF-KIIFLD- 40 usage_01219.pdb 1 -VFGIWG---H------EEAPQITYYGLHS------LQHRGQEGAGIVAT- 34 usage_01645.pdb 1 -IYLLSR---IIGDLDEAASLRLLGNCREA------MAGDG---RVVVIE- 37 usage_01646.pdb 1 DIYLLSR---IIGDLDEAASLRLLGNCREA------MAGDG---RVVVIE- 38 usage_02010.pdb 1 -AVFMKW---ICHDWSDEHCLKFLKNCYEA------LPDNG----KVIVAE 37 usage_02400.pdb 1 DAILMKW---ILHDWSDAHCATLLKNCYDA------LPEKGG---KVIVVE 39 usage_02463.pdb 1 -AVLLKW---VLHDWNDEQSLKILKNSKEA------ISHKGKD-GKVIIID 40 usage_02466.pdb 1 -AVLLKW---VLHDWNDEQSLKILKNSKEA------ISHKGKD-GKVIIID 40 usage_02472.pdb 1 -AVLLKW---VLHDWNDEQSLKILKNSKEA------ISHKGKD-GKVIIID 40 usage_02877.pdb 1 -VTLKWALW-DWDK-TAYYKPLIEAYQAKH------P----NV--KFEP-- 34 usage_03131.pdb 1 --VWMSQ---FLDCFSEEEVISILTRVAQS------IGKDS----KVYIME 36 usage_03138.pdb 1 -AYVLRG---VLEDWADADAVRLLVRIRQA------MGDAPEA--RLLILD 39 usage_03300.pdb 1 --IMMKC---ILHDWDDKECIEILKRCKDA------VPRDG-G--KVIIID 37 usage_04044.pdb 1 -AVLLKW---VLHDWNDEQSLKILKNSKEA------ISHKGKD-GKVIIID 40 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################