################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:46 2021 # Report_file: c_0461_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00216.pdb # 2: usage_00217.pdb # 3: usage_00408.pdb # 4: usage_00409.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # # Length: 91 # Identity: 73/ 91 ( 80.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 91 ( 80.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 91 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 RLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDK-------RKGLDLLRMKVEEGDVI 53 usage_00217.pdb 1 RLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVI 60 usage_00408.pdb 1 ALFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKA-----DRKGLDLLR-KVKEGDVI 54 usage_00409.pdb 1 --FGYARVST---SLDIQVRALKDAGVKANRIFTDKA-----DRKGLDLLR-KVKEGDVI 49 usage_00410.pdb 1 -LFGYARV-----SLDIQVRALKDAGVKANRIFTDKAS---SDRKGLDLLR-KVKEGDVI 50 usage_00411.pdb 1 ALFGYARV---QQSLDIQVRALKDAGVKANRIFTDK------DRKGLDLLR-KVKEGDVI 50 FGYARV SLDIQVRALKDAGVKANRIFTDK RKGLDLLR KV EGDVI usage_00216.pdb 54 LVKKLDRLGRDTADMIQLIKEFDAQGVSIRF 84 usage_00217.pdb 61 LVKKLDRLGRDTADMIQLIKEFDAQGVSIRF 91 usage_00408.pdb 55 LVKKLDHLGRDTAD-IQLIKEFDAQGVSIRF 84 usage_00409.pdb 50 LVKKLDHLGRDTAD-IQLIKEFDAQGVSIRF 79 usage_00410.pdb 51 LVKKLDHLGRDTAD-IQLIKEFDAQGVSIRF 80 usage_00411.pdb 51 LVKKLDHLGRDTAD-IQLIKEFDAQGVSIRF 80 LVKKLD LGRDTAD IQLIKEFDAQGVSIRF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################