################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:43 2021 # Report_file: c_0670_44.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00228.pdb # 2: usage_00230.pdb # 3: usage_00235.pdb # 4: usage_00755.pdb # # Length: 55 # Identity: 5/ 55 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 55 ( 72.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 55 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00228.pdb 1 SMVIAVPEPFGGAIIIGQ--ESITYHN-GD--KYLAIAP-PIIKQSTIVCHNR-- 47 usage_00230.pdb 1 SMVIAVPEPFGGAIIIGQ--ESITYHN-GD--KYLAIAP-PIIKQSTIVCHNRVD 49 usage_00235.pdb 1 SMVIAVPEPFGGAIIIGQ--ESITYHN-GD--KYLAIAP-PIIKQSTIVCHNR-- 47 usage_00755.pdb 1 -SFFVDNN-KNYIAAIDIAQDKVLYYNAT-DFSFLYERRLPFS--TSCCLQ---- 46 mviavpe fggaiiIgq esitYhN g kyLaiap Pii stivch #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################