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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:32:45 2021
# Report_file: c_0535_8.html
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#====================================
# Aligned_structures: 11
#   1: usage_00004.pdb
#   2: usage_00043.pdb
#   3: usage_00053.pdb
#   4: usage_00054.pdb
#   5: usage_00055.pdb
#   6: usage_00056.pdb
#   7: usage_00057.pdb
#   8: usage_00058.pdb
#   9: usage_00059.pdb
#  10: usage_00070.pdb
#  11: usage_00080.pdb
#
# Length:        125
# Identity:       17/125 ( 13.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/125 ( 56.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           42/125 ( 33.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  LMPA------LMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMC   54
usage_00043.pdb         1  LMPA------LMAVFQHVWTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMC   54
usage_00053.pdb         1  ----NPD-LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   54
usage_00054.pdb         1  ----NPD-LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   54
usage_00055.pdb         1  ------D-LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   52
usage_00056.pdb         1  ----NPD-LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   54
usage_00057.pdb         1  --------LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   51
usage_00058.pdb         1  --------LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   51
usage_00059.pdb         1  --------LPALAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQ-C   51
usage_00070.pdb         1  LMPA------LMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQ---RGLNLQDL-G   50
usage_00080.pdb         1  ------YAPYLNR-IGRYNANLRKE-T--ALGLSTAK-RALAILSAKDGLPIGTLGIFAV   49
                                       a fqhv triqsE d  rLdLtppd hvLklideq       Lg    

usage_00004.pdb        55  -------ALITRKIRELEGRNLVRR------------QLFLTDEGLAIHLHAELIMSRVH   95
usage_00043.pdb        55  ----RDKALITRKIRELEGRNLVRRE--RNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVH  108
usage_00053.pdb        55  ----RDKALITRKIRELEGRNLVRRERS--------FQLFLTDEGLAIHQHAEAI-SRVH  101
usage_00054.pdb        55  ----RDKALITRKIRELEGRNLVRRE--R-------FQLFLTDEGLAIHQHAEAI-SRVH  100
usage_00055.pdb        53  ----RDKALITRKIRELEGRNLVRRE--RNPSDQRSFQLFLTDEGLAIHQHAEAI-SRVH  105
usage_00056.pdb        55  ----RDKALITRKIRELEGRNLVRRE--RNPSDQRSFQLFLTDEGLAIHQHAEAI-SRVH  107
usage_00057.pdb        52  ----RDKALITRKIRELEGRNLVRRE--R-------FQLFLTDEGLAIHQHAEAI-SRVH   97
usage_00058.pdb        52  ----RDKALITRKIRELEGRNLVRRE--RN----RSFQLFLTDEGLAIHQHAEAI-SRVH  100
usage_00059.pdb        52  ----RDKALITRKIRELEGRNLVRRE--RNPSDQRSFQLFLTDEGLAIHQHAEAI-SRVH  104
usage_00070.pdb        51  RQMCRDKALITRKIRELEGRNLVRRE--RNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVH  108
usage_00080.pdb        50  ----VEQSTLSRALDGLQADGLVRRE--VD-DQ-RSSRVYLTPAGRAVYDRLWPH-RASH  100
                                  alitRkireLegrnLVRR            qlfLTdeGlAih hae i srvH

usage_00004.pdb        96  DELFA  100
usage_00043.pdb       109  DELF-  112
usage_00053.pdb       102  DELF-  105
usage_00054.pdb       101  DELF-  104
usage_00055.pdb       106  DELF-  109
usage_00056.pdb       108  DEL--  110
usage_00057.pdb        98  DELF-  101
usage_00058.pdb       101  DELF-  104
usage_00059.pdb       105  DELF-  108
usage_00070.pdb       109  DE-L-  111
usage_00080.pdb       101  DRFQ-  104
                           De   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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