################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:47 2021 # Report_file: c_0836_26.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00029.pdb # 3: usage_00103.pdb # 4: usage_00256.pdb # 5: usage_00257.pdb # 6: usage_00282.pdb # 7: usage_00460.pdb # 8: usage_00510.pdb # 9: usage_00511.pdb # # Length: 67 # Identity: 18/ 67 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 67 ( 43.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 67 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 --DEMKKAAGWAALKYV---E-KGSIVGVGTGSTVNHFIDALGTMSEEIKGAVSSSVAST 54 usage_00029.pdb 1 -QDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAEFDGAVASSEATA 59 usage_00103.pdb 1 -QDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAAVKDRYRGAVSSSVATT 59 usage_00256.pdb 1 --DELKKAVGWAALQYV---Q-PGTIVGVGTGSTAAHFIDALGT-KGQIEGAVSSSDAST 53 usage_00257.pdb 1 --DELKKAVGWAALQYV---Q-PGTIVGVGTGSTAAHFIDALGT-KGQIEGAVSSSDAST 53 usage_00282.pdb 1 -QLEMKKLAAQAALQYV---K-ADRIVGVGSGSTVNCFIEALGTIKDKIQGAVAASKESE 55 usage_00460.pdb 1 --DEMKKAAGWAALKYV---E-KGSIVGVGTGSTVNHFIDALGTMSEEIKGAVSSSVAST 54 usage_00510.pdb 1 TQDELKKAVGWAALQYV---Q-PGTIVGVGTGSTAAHFIDALGT-KGQIEGAVSSSDAST 55 usage_00511.pdb 1 TQDELKKAVGWAALQYV---Q-PGTIVGVGTGSTAAHFIDALGT-KGQIEGAVSSSDAST 55 de K AA yv ivGVGtGST FIdAL GAV sS a usage_00017.pdb 55 EKLEALG 61 usage_00029.pdb 60 KRLKEHG 66 usage_00103.pdb 60 ERLKS-- 64 usage_00256.pdb 54 EKLKSLG 60 usage_00257.pdb 54 EKLKSLG 60 usage_00282.pdb 56 ELLRKQG 62 usage_00460.pdb 55 EKLEALG 61 usage_00510.pdb 56 EKLKSLG 62 usage_00511.pdb 56 EKLKSLG 62 e L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################