################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:08 2021 # Report_file: c_0150_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00019.pdb # 2: usage_00022.pdb # 3: usage_00026.pdb # 4: usage_00029.pdb # 5: usage_00036.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00046.pdb # 10: usage_00053.pdb # 11: usage_00064.pdb # # Length: 116 # Identity: 29/116 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/116 ( 37.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/116 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -MV-LTQSPASLAVSLGQRATISCKASQSVDY-DGDSYMNWYQQKPGQPPKLLIYVASNL 57 usage_00022.pdb 1 -LV-MTQTPASLAVSLGQRATISCRASENVDR-YGNSFMHWYQQKAGQPPKLLIYRASNL 57 usage_00026.pdb 1 --V-LTQSPASLTVSLGQRATISCRASKSVDS-YGNSFMEWYQQKPGQPPKLLIYRASNL 56 usage_00029.pdb 1 -VL-MTQTPLSLPVSLGDQASISCRSNQTILLSDGDTYLEWYLQKPGQSPKLLIYKVSNR 58 usage_00036.pdb 1 DIV-LTQSPASLALSLGQRATISCRASKSVST-SGYSYMYWYQQKPGQPPKLLIYLASNL 58 usage_00038.pdb 1 --T-VLTQPPALTVSPGEKLTISCKASESVT-----SRMHWYQQKPGQQPKLLIYKASNL 52 usage_00039.pdb 1 -IV-LTQSPATLSLSPGERATISCRASESVDS-YGHSFMQWYQQKPGQAPRLLIYRASNL 57 usage_00040.pdb 1 DVL-MTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNR 59 usage_00046.pdb 1 --L-MTQTPLSLPVSLGDQASISCKSSQSIVHSSGNTYFEWYLQKPGQSPKLLIYKVSNR 57 usage_00053.pdb 1 --DIVLTQPPSVSVAPGQTARISCSGDN-I---GS-YYVHWYQQKPGQAPVLVIYEDSER 53 usage_00064.pdb 1 -IV-LTQSPASLAVSLGQRATISCRASKSVSS-SVNSYMHWYQQKPGQPPKLLIYLASNL 57 P l s G IsC WY QKpGQ P LlIY Sn usage_00019.pdb 58 KSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPFTFGSGT-KLEIKRA 112 usage_00022.pdb 58 ESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGT-KLEI--- 109 usage_00026.pdb 57 ESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGT-KLEIKRA 111 usage_00029.pdb 59 FSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPPTFGGGT-KLEIKRA 113 usage_00036.pdb 59 ESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCQHSRELPWTFGGGT-KLEI--- 110 usage_00038.pdb 53 ASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGT-KLELKRA 107 usage_00039.pdb 58 EPGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQGNEVPFTFGQGT-KVEIKRT 112 usage_00040.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGT-KLEL--- 111 usage_00046.pdb 58 FSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHIPFTFGSGT-KLEIKRA 112 usage_00053.pdb 54 PSGIPERFSGSNSGNTATLTISGTQAEDEADYYCSSYDDPNFQVFGGGTKLTVK-- 107 usage_00064.pdb 58 ESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCQHSRELRTFGGGTK-LEIKRA- 111 sG P RFSGSgS tdfTL I e D Y C g g k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################