################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:43 2021 # Report_file: c_1327_16.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00086.pdb # 2: usage_00242.pdb # 3: usage_00348.pdb # 4: usage_00516.pdb # 5: usage_00600.pdb # 6: usage_00601.pdb # 7: usage_00602.pdb # 8: usage_00994.pdb # # Length: 62 # Identity: 20/ 62 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 62 ( 83.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 62 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00242.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00348.pdb 1 AGAITAALFLQHFVSDQI-PWAHFDIF--AWNLED-LPGRPIGGEAMALRAVFHYLEQQ- 55 usage_00516.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00600.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00601.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00602.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 usage_00994.pdb 1 AGACTAAAFLKEFVT--HPKWAHLDIAGVMTNKD-EVPYLRKGMAGRPTRTLIEFLFRFS 57 AGAcTAAaFLkeFVt h kWAHlDIa mtNkd vPylrkGmagrptRtliefLfrf usage_00086.pdb 58 Q- 58 usage_00242.pdb 58 Q- 58 usage_00348.pdb -- usage_00516.pdb 58 QE 59 usage_00600.pdb 58 Q- 58 usage_00601.pdb 58 Q- 58 usage_00602.pdb 58 Q- 58 usage_00994.pdb 58 Q- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################