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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:12 2021
# Report_file: c_0888_48.html
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#====================================
# Aligned_structures: 5
#   1: usage_00007.pdb
#   2: usage_00243.pdb
#   3: usage_00260.pdb
#   4: usage_00790.pdb
#   5: usage_00791.pdb
#
# Length:        130
# Identity:        1/130 (  0.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     31/130 ( 23.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           66/130 ( 50.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00007.pdb         1  YYTFMKPYM---EQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFP---   54
usage_00243.pdb         1  ---------ESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY-----------Y--   38
usage_00260.pdb         1  ------------------ITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ   41
usage_00790.pdb         1  ---------------LFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ   44
usage_00791.pdb         1  ---------------LFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ   44
                                              tieamks  d Va    efws  c ee              

usage_00007.pdb        55  --QSPLQSYNFAL-S-SIKDVVPNLLNLLTRQNEDPEDDDW--NVSMSAGACLQLFAQN-  107
usage_00243.pdb        39  --QYM--------ETYMGPALFAITIEAMKSD---------IDEVALQGIEFWSNVCDEE   79
usage_00260.pdb        42  GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLSTC-   96
usage_00790.pdb        45  GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLATC-   99
usage_00791.pdb        45  GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLATC-   99
                                               lvpil   lt q           n    ag cl l     

usage_00007.pdb            ----------     
usage_00243.pdb        80  MDLAIEASEA   89
usage_00260.pdb            ----------     
usage_00790.pdb            ----------     
usage_00791.pdb            ----------     
                                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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