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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:32:10 2021
# Report_file: c_0332_1.html
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#====================================
# Aligned_structures: 11
#   1: usage_00002.pdb
#   2: usage_00003.pdb
#   3: usage_00004.pdb
#   4: usage_00005.pdb
#   5: usage_00006.pdb
#   6: usage_00010.pdb
#   7: usage_00045.pdb
#   8: usage_00046.pdb
#   9: usage_00047.pdb
#  10: usage_00048.pdb
#  11: usage_00049.pdb
#
# Length:        108
# Identity:       28/108 ( 25.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/108 ( 34.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/108 ( 23.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00002.pdb         1  YRSAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   60
usage_00003.pdb         1  YRSAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   60
usage_00004.pdb         1  --SAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   58
usage_00005.pdb         1  --SAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   58
usage_00006.pdb         1  --SAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   58
usage_00010.pdb         1  PVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTH   60
usage_00045.pdb         1  -MPAFTAELTVPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGN   59
usage_00046.pdb         1  ------------------PVKFDKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGN   42
usage_00047.pdb         1  YRSAFSVGLETRVTVPNVPIRFTKIFYNQQNHYDGSTGKFYCNIPGLYYFSYHITVYMKD   60
usage_00048.pdb         1  --SAFSVGLETYVT---MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKD   55
usage_00049.pdb         1  YRSAFSVGLETY--IPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKD   58
                                             P  F K  YN    Y   TG F C  PG YYF YH       

usage_00002.pdb        61  VKVSLFKKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGDQVWLQVY-G  107
usage_00003.pdb        61  VKVSLFKKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGDQVWLQVY-G  107
usage_00004.pdb        59  VKVSLFKKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGDQVWLQV---  103
usage_00005.pdb        59  VKVSLFKKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGDQVWLQV---  103
usage_00006.pdb        59  VKVSLFKKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGDQVWLQVYG-  105
usage_00010.pdb        61  VWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVW------  102
usage_00045.pdb        60  VWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDQVF------  101
usage_00046.pdb        43  VWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDQVF------   84
usage_00047.pdb        61  VKVSLFKKDKAVLFTYDQYQENVDQASGSVLLHLEV-GDQVWLQV---  104
usage_00048.pdb        56  VKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWL-----   98
usage_00049.pdb        59  VKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQV---  103
                           V V LfK       TYD Y     dqasgs    l  gDQV       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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