################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:39 2021 # Report_file: c_0884_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00027.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00050.pdb # 8: usage_00051.pdb # 9: usage_00052.pdb # 10: usage_00088.pdb # 11: usage_00089.pdb # 12: usage_00090.pdb # 13: usage_00091.pdb # # Length: 86 # Identity: 71/ 86 ( 82.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 86 ( 82.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 86 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 THADAAAAVEAA-SAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAAT-LGQSKSVYQ 58 usage_00012.pdb 1 -HADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 59 usage_00013.pdb 1 -HADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 59 usage_00027.pdb 1 -HADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 59 usage_00048.pdb 1 -HADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 59 usage_00049.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00050.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00051.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00052.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00088.pdb 1 -HADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 59 usage_00089.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00090.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 usage_00091.pdb 1 THADAAAAVEAAMSAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAATMLGQSKSVYQ 60 HADAAAAVEAA SAKSDWAALPFDERAAVFLRAADLLAGPWREKIAAAT LGQSKSVYQ usage_00011.pdb 59 AEIDAVCELIDFWRFNVAFARQILEQ 84 usage_00012.pdb 60 AEIDAVCELIDFWRFNVAFARQILEQ 85 usage_00013.pdb 60 AEIDAVCELIDFWRFNVAFARQILEQ 85 usage_00027.pdb 60 AEIDAVCELIDFWRFNVAFARQILEQ 85 usage_00048.pdb 60 AEIDAVCELIDFWRFNVAFARQILEQ 85 usage_00049.pdb 61 AEIDAVCELIDFWRFNVAFARQILEQ 86 usage_00050.pdb 61 AEIDAVCELIDFWRFNVAFARQILEQ 86 usage_00051.pdb 61 AEIDAVCELIDFWR------------ 74 usage_00052.pdb 61 AEIDAVCELIDFWR------------ 74 usage_00088.pdb 60 AEIDAVCELIDFWR------------ 73 usage_00089.pdb 61 AEIDAVCELIDFWRFNVAFARQILEQ 86 usage_00090.pdb 61 AEIDAVCELIDFWR------------ 74 usage_00091.pdb 61 AEIDAVCELIDFWR------------ 74 AEIDAVCELIDFWR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################