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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:47:26 2021
# Report_file: c_0210_3.html
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#====================================
# Aligned_structures: 8
#   1: usage_00001.pdb
#   2: usage_00003.pdb
#   3: usage_00004.pdb
#   4: usage_00013.pdb
#   5: usage_00014.pdb
#   6: usage_00015.pdb
#   7: usage_00030.pdb
#   8: usage_00042.pdb
#
# Length:        109
# Identity:       54/109 ( 49.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     70/109 ( 64.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            4/109 (  3.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  -IQMTQSPASLSVSVGETVTITCRASEIIYSNLAWYQQKQGKSPQLLVYSATNLAEGVPS   59
usage_00003.pdb         1  -IQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKQGKSPQLLVYAATNLADGVPS   59
usage_00004.pdb         1  -IQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKQGKSPQLLVYAATNLADGVPS   59
usage_00013.pdb         1  -IVMTQTPASQSASLGESVTITCLASQTIGTWLAWYQQKPGKSPQLLIYAATSLADGVPS   59
usage_00014.pdb         1  -IVMTQTPASQSASLGESVTITCLASQTIGTWLAWYQQKPGKSPQLLIYAATSLADGVPS   59
usage_00015.pdb         1  QIVMTQTPASLSASVGETVTITCRASGNIYNYLAWYQQKQGKSPQLLVYNAKTLVDGVPL   60
usage_00030.pdb         1  -LQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPS   59
usage_00042.pdb         1  DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPS   60
                            i mTQ PaS S S Ge vTITC AS  i   LAWYqQK GksPQLL Y A  L  GVPs

usage_00001.pdb        60  RFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGNPWTFGGGTKLEI---  105
usage_00003.pdb        60  RFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGTPYTFGGGTRLEI---  105
usage_00004.pdb        60  RFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGTPYTFGGGTRLEI---  105
usage_00013.pdb        60  RFSGSGSGTKFSFKISSLQAEDFVSYYCQQLSSTPYTFGGGTKLEI---  105
usage_00014.pdb        60  RFSGSGSGTKFSFKISSLQAEDFVSYYCQQLSSTPYTFGGGTKLEI---  105
usage_00015.pdb        61  RFSGSGSGTQYSLKINSLQPEDFGNYYCHHFWNTPYTFGGGTKLEIKRA  109
usage_00030.pdb        60  RFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDV---  105
usage_00042.pdb        61  RFSGSGSGTQYSLKINSLQPEDFGTYYCHHFWSTPWTFGGGTKLEV---  106
                           RFSGSGSGT  s kI sLq EDF  YYC      P TFGGGT le    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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