################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:30 2021 # Report_file: c_0676_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00031.pdb # 3: usage_00035.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # 6: usage_00170.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 42 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 42 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 QVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELD 42 usage_00031.pdb 1 TVRISQGPYKGYIGVVKDATE--STARVELHS--TCQTISVD 38 usage_00035.pdb 1 RIEVLNGEQRGSKGIVTRTTK--DIATIKLNG--FTTPLEFP 38 usage_00106.pdb 1 QVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELD 42 usage_00107.pdb 1 QVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELD 42 usage_00170.pdb 1 VVEIIAGPFKGERAKVIRVDKHKEEVTLELENAAVPIPITLP 42 v Gp g V t p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################