################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:20:38 2021 # Report_file: c_0069_11.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00076.pdb # 9: usage_00101.pdb # 10: usage_00145.pdb # # Length: 245 # Identity: 33/245 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/245 ( 33.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/245 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --TAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 54 usage_00020.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 55 usage_00021.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 55 usage_00022.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 55 usage_00023.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 55 usage_00024.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 55 usage_00025.pdb 1 --TAVITGGGSGIGLATAKRFVAEGAYVFIVDV-SRKELEQAAAEIG---RNVTAVKADV 54 usage_00076.pdb 1 -KVAIVTGASKGIGAAIAKALADEGAAVVVNYASSKAGADAVVSAITEAGGRAVAVGGDV 59 usage_00101.pdb 1 GKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERLLAEAVAALE---AEAIAVVADV 56 usage_00145.pdb 1 --IAVITGATSGIGLAAAKRFVAEGARVFITGR-RKDVLDAAIAEIG---GGAVGIQADS 54 a TG sGIG A ak f EGA v l a a i av aDv usage_00019.pdb 55 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 110 usage_00020.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 111 usage_00021.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 111 usage_00022.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 111 usage_00023.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 111 usage_00024.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 111 usage_00025.pdb 55 TKLEDLDRLYAIVREQRGSIDVLFNNAGAIEQKTLEEITP--EHY--DRTFDVNVRGLIF 110 usage_00076.pdb 60 SKAADAQRIVDTAIETYGRLDVLVNNSGVYEFAPIEAITE--EHY--RRQFDTNVFGVLL 115 usage_00101.pdb 57 SDPKAVEAVFAEALEEFGRLHGVAHFAG------------VAWEKVLRVNL----TGSFL 100 usage_00145.pdb 55 ANLAELDRLYEKVKAEAGRIDVLFVNAGGGS-LPLGEVTE--EQY--DDTFDRNVKGVLF 109 r e G dvl n G e y f G usage_00019.pdb 111 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 168 usage_00020.pdb 112 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 169 usage_00021.pdb 112 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 169 usage_00022.pdb 112 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 169 usage_00023.pdb 112 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 169 usage_00024.pdb 112 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 169 usage_00025.pdb 111 TVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKA--AVRSLARTWTTELKGRSIRV 168 usage_00076.pdb 116 TTQAAVKHLGEGASIINISSVVTSITPPASAVYSGTKG--AVDAITGVLALELGPRKIRV 173 usage_00101.pdb 101 VARKAGEVLEEGGSLVLTG-------------------KLGVVGLARTLALELARKGVRV 141 usage_00145.pdb 110 TVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKA--ALRSFARNWILDLKDRGIRI 167 t qkA L G S lt av ar eL r iRv usage_00019.pdb 169 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 215 usage_00020.pdb 170 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 216 usage_00021.pdb 170 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 216 usage_00022.pdb 170 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 216 usage_00023.pdb 170 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 216 usage_00024.pdb 170 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 216 usage_00025.pdb 169 NAVSPGAIDTP------------A-KFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGI 215 usage_00076.pdb 174 NAINPGMIV--------TSDLE-A-QVLGQTPLGRLGEPNDIASVAVFLASDDARWMTGE 223 usage_00101.pdb 142 NVLLPGLIQ-------------AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 188 usage_00145.pdb 168 NTLSPGPTE--TDPVQQ-QGLL-N-ALAAQVP-GRVGRAEEVAAAALFLASDDSSFVTGA 221 N PG i P GR Grpee A a lFLaSdds G usage_00019.pdb 216 ELFVD 220 usage_00020.pdb 217 ELFVD 221 usage_00021.pdb 217 ELFVD 221 usage_00022.pdb 217 ELFVD 221 usage_00023.pdb 217 ELFVD 221 usage_00024.pdb 217 ELFVD 221 usage_00025.pdb 216 ELFVD 220 usage_00076.pdb 224 HLVVS 228 usage_00101.pdb 189 ALYVD 193 usage_00145.pdb 222 ELFVD 226 L Vd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################