################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:14:04 2021 # Report_file: c_0048_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00025.pdb # 2: usage_00064.pdb # 3: usage_00065.pdb # 4: usage_00076.pdb # 5: usage_00090.pdb # 6: usage_00107.pdb # 7: usage_00159.pdb # 8: usage_00160.pdb # 9: usage_00168.pdb # 10: usage_00172.pdb # # Length: 253 # Identity: 90/253 ( 35.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 131/253 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/253 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 usage_00064.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 usage_00065.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 usage_00076.pdb 1 --RALIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLRGRVEEFASGWGSRPELCFPC 58 usage_00090.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 usage_00107.pdb 1 --RILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE--LVFPC 56 usage_00159.pdb 1 --RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSD--LVVKC 56 usage_00160.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 usage_00168.pdb 1 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE--LVFPC 58 usage_00172.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD--IVLQC 56 R L tG s SIAyGIA a REGAeLAFTY d R EfA GS v C usage_00025.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 usage_00064.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 usage_00065.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 usage_00076.pdb 59 DVADDSQIEAVFAALGKHWDGLDIIVHSVGFAPGDQLDGDFTAVTTREGFRIAHDISAYS 118 usage_00090.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 usage_00107.pdb 57 DVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYS 116 usage_00159.pdb 57 DVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID-TSREGFKIAMDISVYS 115 usage_00160.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 usage_00168.pdb 59 DVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYS 118 usage_00172.pdb 57 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 116 DVa D I fa L W D VHSigfAP Gd tRE F IAhDIS YS usage_00025.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 usage_00064.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 usage_00065.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 usage_00076.pdb 119 FIALAKAGREMMKGRN-GSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSLGAEG 177 usage_00090.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 usage_00107.pdb 117 FPALAKAALPML--SDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKG 174 usage_00159.pdb 116 LIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHG 174 usage_00160.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 usage_00168.pdb 119 FPALAKAALPML--SDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKG 176 usage_00172.pdb 117 FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 174 f A aka m llTLSYlGAEr PnYN MG AKA LEa VRY A g G usage_00025.pdb 175 VRVNAISAGPIRT-L-ASGIKD-----FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD 227 usage_00064.pdb 175 VRVNAISAGPIRT-L-AASGIK--DFRKMLA--HCEAVTPIRRTVTIEDVGNSAAFLCSD 228 usage_00065.pdb 175 VRVNAISAGPIRT------------FRKMLA--HCEAVTPIRRTVTIEDVGNSAAFLCSD 220 usage_00076.pdb 178 TRVNAVSAGPIR---------------M-LA--ANERQTPLRRNVTIEEVGNAGAFLCSD 219 usage_00090.pdb 175 VRVNAISAGPIRTL-----------FRKMLA--HCEAVTPIRRTVTIEDVGNSAAFLCSD 221 usage_00107.pdb 175 VRVNAISAGPIKT-L-AASGIK--SFGKILD--FVESNSPLKRNVTIEQVGNAGAFLLSD 228 usage_00159.pdb 175 HRINAISAGPVKT-LA------ATGFHLLME--HTTKVNPFGKPITIEDVGDTAVFLCSD 225 usage_00160.pdb 175 VRVNAISAGPIRT-L-AASGIK--DFRKMLA--HCEAVTPIRRTVTIEDVGNSAAFLCSD 228 usage_00168.pdb 177 VRVNAISAGPIS---GIK------SFGKILD--FVESNSPLKRNVTIEQVGNAGAFLLSD 225 usage_00172.pdb 175 VRVNAISAGPI------------------------EAVTPIRRTVTIEDVGNSAAFLCSD 210 RvNAiSAGPi e P r vTIE VGn aFL SD usage_00025.pdb 228 LSAGISGEVVHVD 240 usage_00064.pdb 229 LSAGISGEVVHVD 241 usage_00065.pdb 221 LSAGISGEVVHVD 233 usage_00076.pdb 220 LASGISGEILYVD 232 usage_00090.pdb 222 LSAGISGEVVHVD 234 usage_00107.pdb 229 LASGVTAEVMHVD 241 usage_00159.pdb 226 WARAITGEVVHVD 238 usage_00160.pdb 229 LSAGISGEVVHVD 241 usage_00168.pdb 226 LASGVTAEVMHVD 238 usage_00172.pdb 211 LSAGISGEVVHVD 223 l g Ev hVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################