################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:19 2021 # Report_file: c_0636_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00011.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00139.pdb # 5: usage_00140.pdb # 6: usage_00141.pdb # 7: usage_00142.pdb # 8: usage_00143.pdb # 9: usage_00206.pdb # 10: usage_00207.pdb # 11: usage_00208.pdb # # Length: 115 # Identity: 39/115 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/115 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/115 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -LKERVRIDMYADGTQDLMMMIAVAPFKTPKEKEESYDLILSRAKTRYFPVFEKILKDHG 59 usage_00066.pdb 1 -----------------------------PKEKEESYDLILSRAKTRYFPVFEKILKDHG 31 usage_00067.pdb 1 -----------------------------------SYDLILSRAKTRYFPVFEKILKDHG 25 usage_00139.pdb 1 -----------------------------AEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 31 usage_00140.pdb 1 ----------------------------SAEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 32 usage_00141.pdb 1 -----------------------------AEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 31 usage_00142.pdb 1 ----------------------------SAEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 32 usage_00143.pdb 1 DLKERALIDMYVGGTDDLMGFLLSFPFLSAEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 60 usage_00206.pdb 1 -----------------------------PDDQQKEVVNMAQKAIIRYFPVFEKILRGHG 31 usage_00207.pdb 1 ----------------------------KPDDQQKEVVNMAQKAIIRYFPVFEKILRGHG 32 usage_00208.pdb 1 -------------------------------DQQKEVVNMAQKAIIRYFPVFEKILRGHG 29 A RYFP EK L HG usage_00011.pdb 60 EAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQ 114 usage_00066.pdb 32 EAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQ 86 usage_00067.pdb 26 EAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQ 80 usage_00139.pdb 32 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLA 86 usage_00140.pdb 33 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLA 87 usage_00141.pdb 32 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLA 86 usage_00142.pdb 33 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLA 87 usage_00143.pdb 61 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLA 115 usage_00206.pdb 32 QSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLE 86 usage_00207.pdb 33 QSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLE 87 usage_00208.pdb 30 QSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLE 84 FLVGN LS AD LL IL EE LS FP LQ S IPTIK FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################