################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:03 2021 # Report_file: c_1480_293.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00015.pdb # 2: usage_01409.pdb # 3: usage_03802.pdb # 4: usage_03803.pdb # # Length: 62 # Identity: 1/ 62 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 62 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 SWYREAMDEGEKLLNHILETYPPEQLDTLVTIYAEVC------------ELETNFWTAAL 48 usage_01409.pdb 1 ----------------------LDNLMSYLETIKNDGPIDTDKKYYLWLKEVFKNYSFDI 38 usage_03802.pdb 1 ---DDIINVFESLMNKLAESMSDKELEQVKQVFLESC------------IHERRFFNMAM 45 usage_03803.pdb 1 ---DDIINVFESLMNKLAESMSDKELEQVKQVFLESC------------IHERRFFNMAM 45 L e c e f a usage_00015.pdb 49 EY 50 usage_01409.pdb 39 NL 40 usage_03802.pdb 46 TL 47 usage_03803.pdb 46 TL 47 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################