################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:36 2021 # Report_file: c_0777_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00156.pdb # 2: usage_00301.pdb # 3: usage_00859.pdb # 4: usage_00860.pdb # 5: usage_00861.pdb # 6: usage_01017.pdb # # Length: 103 # Identity: 13/103 ( 12.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/103 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/103 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00156.pdb 1 DIQGMNRYFGWYEK------KIQDIKPWVEQLEKDYPYQKLMLTEYGADANLAHQT-EYL 53 usage_00301.pdb 1 -VVCLNRYYGWYVDHGDLTNAEVGIRKELLEWQDKFPDKPIIITEYGADTLPGLHSTW-- 57 usage_00859.pdb 1 DVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLH-QPIIITEYGVDTLAGLHS-Y-- 56 usage_00860.pdb 1 -VLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLH-QPIIITEYGVDTLAGLHSMY-- 56 usage_00861.pdb 1 DVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLH-QPIIITEYGVDTLAGLHSMY-- 57 usage_01017.pdb 1 -VLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLH-QPIIITEYGVDTLAGLHS-Y-- 55 v clNRYyGWYv ae kell wq k qpiiiTEYG Dtl glhs usage_00156.pdb 54 GDALNWGKPF---YPETFQTKTHEYQWSIIKDHPYIIASYL-- 91 usage_00301.pdb 58 ----------NIPYTEEFQCDFYEMSHRVFDGIPNLVGEQVWN 90 usage_00859.pdb 57 ----------TD-WSEEYQCAWLD-YHRVFDRVSAVVGEQV-- 85 usage_00860.pdb 57 ----------TDMWSEEYQCAWLDMYHRVFDRVSAVVGEQV-- 87 usage_00861.pdb 58 ----------TDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWN 90 usage_01017.pdb 56 ----------TD-WSEEYQCAWLD-YHRVFDRVSAVVGEQV-- 84 Ee Qc hrvfd vgeqv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################