################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:50 2021 # Report_file: c_0673_162.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00031.pdb # 4: usage_00088.pdb # 5: usage_00347.pdb # 6: usage_00984.pdb # 7: usage_00985.pdb # 8: usage_01061.pdb # 9: usage_01252.pdb # 10: usage_01524.pdb # 11: usage_01525.pdb # 12: usage_01526.pdb # 13: usage_01677.pdb # 14: usage_01678.pdb # 15: usage_01896.pdb # # Length: 59 # Identity: 18/ 59 ( 30.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 59 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 59 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 TNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSYASGSTPRIFG--------- 50 usage_00029.pdb 1 TNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSYASGSTPRIFGGGTRLT--- 56 usage_00031.pdb 1 TNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSYASGSTPRIFGG-------- 51 usage_00088.pdb 1 NQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFG--------- 50 usage_00347.pdb 1 ARRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNFAVFGRGTKLTVLA 59 usage_00984.pdb 1 NKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVVFG--------- 50 usage_00985.pdb 1 NKRPSGVSDRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVVFG--------- 50 usage_01061.pdb 1 NKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFG---------- 49 usage_01252.pdb 1 SHRPSGISNRFSGSKSGNTASLTISGLHIEDEGDYFCSSLTDRSHRIFG---------- 49 usage_01524.pdb 1 TSRASGVPDRFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--------- 50 usage_01525.pdb 1 TSRASGVPDRFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--------- 50 usage_01526.pdb 1 TSRASGVPDRFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFG--------- 50 usage_01677.pdb 1 NDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFG--------- 50 usage_01678.pdb 1 NDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFG--------- 50 usage_01896.pdb 1 SKRPSGVPDRFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFG--------- 50 R SG RFS S SGn A L Lq EDEaDY C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################