################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:01:17 2021 # Report_file: c_1230_57.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00068.pdb # 2: usage_00076.pdb # 3: usage_00088.pdb # 4: usage_00090.pdb # 5: usage_00093.pdb # 6: usage_00094.pdb # 7: usage_00155.pdb # 8: usage_00185.pdb # 9: usage_00210.pdb # 10: usage_00336.pdb # 11: usage_00337.pdb # 12: usage_00418.pdb # 13: usage_00442.pdb # 14: usage_00443.pdb # 15: usage_00578.pdb # 16: usage_00601.pdb # 17: usage_00602.pdb # 18: usage_00649.pdb # 19: usage_00652.pdb # 20: usage_00659.pdb # 21: usage_00662.pdb # 22: usage_00738.pdb # 23: usage_00847.pdb # 24: usage_00886.pdb # 25: usage_00889.pdb # 26: usage_00890.pdb # 27: usage_00902.pdb # 28: usage_01246.pdb # 29: usage_01266.pdb # 30: usage_01267.pdb # 31: usage_01318.pdb # 32: usage_01320.pdb # 33: usage_01325.pdb # 34: usage_01328.pdb # 35: usage_01340.pdb # 36: usage_01345.pdb # 37: usage_01564.pdb # 38: usage_01568.pdb # 39: usage_01633.pdb # 40: usage_01634.pdb # 41: usage_01643.pdb # 42: usage_01644.pdb # # Length: 45 # Identity: 5/ 45 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 45 ( 64.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 45 ( 35.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00076.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00088.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00090.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00093.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00094.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00155.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00185.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00210.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00336.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00337.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00418.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAYDN 38 usage_00442.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00443.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00578.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00601.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00602.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00649.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00652.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00659.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00662.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00738.pdb 1 -----PCKFATSDNKIVLKAS-SIENKQDWIKHIREVIQERT--- 36 usage_00847.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00886.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00889.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00890.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_00902.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01246.pdb 1 -LIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 35 usage_01266.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01267.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01318.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01320.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01325.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01328.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01340.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01345.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01564.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01568.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01633.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01634.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01643.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 usage_01644.pdb 1 RLIPV-------GDNTVVGISGDISDMQHIERLLKDLVTENAY-- 36 gdntVvgiS dIsdmQhierllkdlvtEna #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################