################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:26 2021 # Report_file: c_1489_31.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00925.pdb # 2: usage_02396.pdb # 3: usage_02427.pdb # 4: usage_03887.pdb # 5: usage_03924.pdb # 6: usage_04143.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 72 ( 2.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 72 ( 69.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00925.pdb 1 NQNNFVHDCVNITIKQHTVTTTTKGENF----TKTDVKMMERVVEQMCITQYERESQAYY 56 usage_02396.pdb 1 --DRFVRDCYNMSVTEYIIKPAE--GKN----NSELNQLDTTVKSQIIREMCITEYRRGS 52 usage_02427.pdb 1 ---NFVHDCVNITVKQHTVTTTTKGENF----TETDIKIMERVVEQMCITQYQRESQAYY 53 usage_03887.pdb 1 NQNNFVHDCVNITIKQHTVTTTTKGENF----TKTDVKMMERVVEQMCITQYERESQAYY 56 usage_03924.pdb 1 ----------------------------PKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQ 32 usage_04143.pdb 1 --NNFVRDCVNITVKQHTVTTTTKGENF----TETDMKIMERVVEQMCVTQYQK------ 48 v q usage_00925.pdb 57 QR---------- 58 usage_02396.pdb ------------ usage_02427.pdb 54 QR---------G 56 usage_03887.pdb 57 QR---------- 58 usage_03924.pdb 33 CKMPKKNFITL- 43 usage_04143.pdb ------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################