################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:44 2021 # Report_file: c_1200_249.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00480.pdb # 2: usage_01572.pdb # 3: usage_01589.pdb # 4: usage_01604.pdb # 5: usage_01606.pdb # 6: usage_02567.pdb # 7: usage_02569.pdb # 8: usage_02577.pdb # 9: usage_02613.pdb # 10: usage_03338.pdb # 11: usage_03734.pdb # 12: usage_03784.pdb # 13: usage_03786.pdb # 14: usage_03788.pdb # 15: usage_03947.pdb # 16: usage_04023.pdb # 17: usage_04374.pdb # 18: usage_04375.pdb # 19: usage_04806.pdb # # Length: 52 # Identity: 1/ 52 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 52 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 52 ( 71.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00480.pdb 1 VFVTPRY----VAFPSS-------------G-DALFAIWS------------ 22 usage_01572.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 usage_01589.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 usage_01604.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 usage_01606.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 usage_02567.pdb 1 ------N----VFCHGSLV-----------TQGSVLFGTVNGMIGLVTS--- 28 usage_02569.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 usage_02577.pdb 1 ------N----VFCHGSLVM----QTP---TQGSVLFGTVNGMIGLVTS--- 32 usage_02613.pdb 1 ------N----VFCHGSLVM------P---TQGSVLFGTVNGMIGLVTS--- 30 usage_03338.pdb 1 -------RTFVNGSSVSSP--------IQLH-HGDRILWGNNHFFRLNLP-- 34 usage_03734.pdb 1 ------N----VFCHGSLVMQST---P---TQGSVLFGTVNGMIGLVTS--- 33 usage_03784.pdb 1 ------N----VFCHGSLVM--T---P---TQGSVLFGTVNGMIGLVTS--- 31 usage_03786.pdb 1 ------N----VFCHGSLVM--T---P---TQGSVLFGTVNGMIGLVTS--- 31 usage_03788.pdb 1 ------N----VFCHGSLVM--T---P---TQGSVLFGTVNGMIGLVTS--- 31 usage_03947.pdb 1 ------N----VFCHGSLV-----------TQGSVLFGTVNGMIGLVTS--- 28 usage_04023.pdb 1 ------N----VFCHGSLV-----------TQGSVLFGTVNGMIGLVTS--- 28 usage_04374.pdb 1 ------N----VFCHGSLVMQ--NL-P---TQGSVLFGTVNGMIGLVTSLSE 36 usage_04375.pdb 1 ------N----VFCHGSLVMQ--NL-P---TQGSVLFGTVNGMIGLVTSLSE 36 usage_04806.pdb 1 ------N----VFCHGSLVMQ-----P---TQGSVLFGTVNGMIGLVTS--- 31 v S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################