################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:31 2021 # Report_file: c_0174_36.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00198.pdb # 4: usage_00276.pdb # 5: usage_00277.pdb # 6: usage_00360.pdb # 7: usage_00382.pdb # 8: usage_00383.pdb # 9: usage_00424.pdb # # Length: 144 # Identity: 54/144 ( 37.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/144 ( 56.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/144 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSG------------ 48 usage_00105.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSG------------ 48 usage_00198.pdb 1 PFVSSPMDTVTEADMAIHMALLGGIGIIHHNCTAEEQAEMVRRVKKYEN-DGPLASKSAD 59 usage_00276.pdb 1 PLISAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKS--KEYPDAN-KDN 57 usage_00277.pdb 1 PLISAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSE-KEYPDAN-KDN 58 usage_00360.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSG------------ 48 usage_00382.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSG------------ 48 usage_00383.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSG------------ 48 usage_00424.pdb 1 PLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNWIS-AYSNEN-LDN 58 PliS aMDTVTEh A MArLGG G IHkNmd sQv eV VK usage_00104.pdb 49 --GLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 103 usage_00105.pdb 49 --GLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 103 usage_00198.pdb 60 TKQLLCGAAIGTIDADRQRLAMLVEAGLDVVVLDSSQGNSVFQINMIKWIKETFPDLQVI 119 usage_00276.pdb 58 FGRLRVGAAIGVG--QMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLI 115 usage_00277.pdb 59 FGRLRVGAAIGVG--QMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLI 116 usage_00360.pdb 49 --GLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 103 usage_00382.pdb 49 --GLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 103 usage_00383.pdb 49 --GLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 103 usage_00424.pdb 59 KGRLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVI 115 LrvGAAIGv R LVEAGvDV VLDSahGhS iI t K IK k n d I usage_00104.pdb 104 VGNVVTEEATKELIENGADGIKVG 127 usage_00105.pdb 104 VGNVVTEEATKELIENGADGIKVG 127 usage_00198.pdb 120 AGNVVTREQAASLIHAGADGLRIG 143 usage_00276.pdb 116 AGNIATAAAAKALCEAGVDAVKVG 139 usage_00277.pdb 117 AGNIATAAAAKALCEAGVDAVKVG 140 usage_00360.pdb 104 VGNVVTEEATKELIENGADGIKVG 127 usage_00382.pdb 104 VGNVVTEEATKELIENGADGIKVG 127 usage_00383.pdb 104 VGNVVTEEATKELIENGADGIKVG 127 usage_00424.pdb 116 VGNVVTEEATKELIENGADGIKVG 139 GN T a k L e G D kvG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################