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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:56:12 2021
# Report_file: c_0173_50.html
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#====================================
# Aligned_structures: 3
#   1: usage_00017.pdb
#   2: usage_00018.pdb
#   3: usage_00104.pdb
#
# Length:        181
# Identity:       91/181 ( 50.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    167/181 ( 92.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/181 (  7.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT   60
usage_00018.pdb         1  RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG-AEGAATAVAEIEKLGRSALAIKADLT   59
usage_00104.pdb         1  KTAIVTGGRGDIGRACVLELAARGANVAINYAS-SEGADSAVAEIKAAGGNAFALQGD-T   58
                           rTivVaGagrDIGRACairfAqeGANVvltYng aEGAatAVAEIeklGrsAlAikaD T

usage_00017.pdb        61  NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTI-AEMDEAFWHQVLDVNLTSLFLTAK  119
usage_00018.pdb        60  NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTI-AEMDEAFWHQVLDVNLTSLFLTAK  118
usage_00104.pdb        59  KEADVAALVEKTVKEFGQVDTLVHVTGGLIARVTSE---TLDHWQSV-DVNLTSFVL-VR  113
                           naAeVeAaisaaadkFGeihgLVHVaGGLIARkTi    deafWhqV DVNLTSlfL ak

usage_00017.pdb       120  TALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNA---  176
usage_00018.pdb       119  TALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNA---  175
usage_00104.pdb       114  ECLPH-TEGSSIVGLASQAGRDGGGPGASAYGASKGAL-TLTRGLAKELGPKIRVNSLCP  171
                           taLPk akGgaIVtfsSQAGRDGGGPGAlAYatSKGAv TfTRGLAKEvGPKIRVNa   

usage_00017.pdb            -     
usage_00018.pdb            -     
usage_00104.pdb       172  G  172
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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