################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:04 2021 # Report_file: c_0740_68.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00101.pdb # 2: usage_00161.pdb # 3: usage_00330.pdb # 4: usage_00331.pdb # 5: usage_00362.pdb # 6: usage_00416.pdb # 7: usage_00831.pdb # # Length: 71 # Identity: 9/ 71 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 71 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 71 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 -----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 55 usage_00161.pdb 1 -GIVHRCVETSSKKTYMAKFVKVK--GT-----DQVLVKKEISILNIARHRNILHLHESF 52 usage_00330.pdb 1 --QVHKCEETATGLKLAAKIIKTR-GMK-----DKEEVKNEISVMNQLDHANLIQLYDAF 52 usage_00331.pdb 1 -GQVHKCEETATGLKLAAKIIKTR-GMK-----DKEEVKNEISVMNQLDHANLIQLYDAF 53 usage_00362.pdb 1 -AIVRKCRQ----KEYAAKFIKKRRLSS-RRGVSREEIEREVNILREIRHPNIITLHDIF 54 usage_00416.pdb 1 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 60 usage_00831.pdb 1 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 60 kC e aAK iK r e E s H N i L usage_00101.pdb 56 ENKTDVILILE 66 usage_00161.pdb 53 ESMEELVMI-- 61 usage_00330.pdb 53 ESKNDIVLVME 63 usage_00331.pdb 54 ESKNDIVLVME 64 usage_00362.pdb 55 ENKTDVVLI-- 63 usage_00416.pdb 61 ENKTDVILILE 71 usage_00831.pdb 61 ENKTDVILILE 71 E k d l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################