################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:05 2021 # Report_file: c_1064_56.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00033.pdb # 2: usage_00093.pdb # 3: usage_00262.pdb # 4: usage_00342.pdb # 5: usage_00345.pdb # 6: usage_00415.pdb # 7: usage_00424.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 76 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 76 ( 46.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --------------FKRLEKDGIISSYWGDES--QGGRRKYYRLTEIGHENMRLAFESWS 44 usage_00093.pdb 1 NPL---TVSKAYQSLLDDN---VIEKRRG----------LGLVK-AGARQRLLTQEKQYF 43 usage_00262.pdb 1 ------KEGTMYLALKRMESKNLIKSYYSNEQSS-GGRRKYYNLTNEGKDFLEIKKQEWR 53 usage_00342.pdb 1 ---LYP--------LRRLESQGLLASEWDNG----GKPRKYYRTTDEGLRVLREVEAQWH 45 usage_00345.pdb 1 ------SEGSIYPLLLRMQKEKLIEGTLKASS--LGPKRKYYHITDKGLEQLEEFKQSWG 52 usage_00415.pdb 1 ------KETTLYSAFARLEKNGYIKSYYGEE----TKRRTYYRITPEGIKYYKQKCEEWE 50 usage_00424.pdb 1 ------KESTLYPILKKLEKAGYLSTYTQEH---QGRRRKYYHLTDSGEKHLVYLTKEWS 51 yy g w usage_00033.pdb 45 RV-DKIIENLEA---N 56 usage_00093.pdb 44 LKKQWPQIKNKLERL- 58 usage_00262.pdb 54 FI-KKVMNQF------ 62 usage_00342.pdb 46 VL-CDGVGKLLE---- 56 usage_00345.pdb 53 MV-STTVNNLLQ---G 64 usage_00415.pdb 51 LT-KKVINKFV----- 60 usage_00424.pdb 52 VY-KTIDGIVEG---- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################