################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:36 2021 # Report_file: c_1312_45.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00179.pdb # 2: usage_00326.pdb # 3: usage_00387.pdb # 4: usage_00994.pdb # 5: usage_01049.pdb # # Length: 48 # Identity: 7/ 48 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 48 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 48 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 LMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATIT- 47 usage_00326.pdb 1 -MNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATIT- 46 usage_00387.pdb 1 -PDGAFQYVVN-NQ-GIDTESDYPYTAGGGSPGTCSASSYQPAASIT- 44 usage_00994.pdb 1 LMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATIT- 47 usage_01049.pdb 1 LINNAFEDMIE-LG-GICPDGDYPYVS--DAPNLCNIDRCTEKYGIKN 44 nnAFe v n te YPY s g C s t a It #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################