################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:55 2021 # Report_file: c_0757_16.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00101.pdb # 2: usage_00102.pdb # 3: usage_00103.pdb # 4: usage_00104.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00131.pdb # 8: usage_00148.pdb # 9: usage_00149.pdb # 10: usage_00150.pdb # 11: usage_00151.pdb # # Length: 68 # Identity: 54/ 68 ( 79.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 68 ( 79.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 68 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 -RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 59 usage_00102.pdb 1 -RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 59 usage_00103.pdb 1 -RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 59 usage_00104.pdb 1 -RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 59 usage_00129.pdb 1 -RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 59 usage_00130.pdb 1 SRLVVVSNRIAP--PD--SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 56 usage_00131.pdb 1 -RLVVVSNRIAP---------GLAVGILGALKAAGGLWFGWSGETGN--QPLKKVKKGNI 48 usage_00148.pdb 1 -RLVVVSNRIAP--PD--SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 55 usage_00149.pdb 1 SRLVVVSNRIAP--P----AGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 54 usage_00150.pdb 1 -RLVVVSNRIAP--PD--SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 55 usage_00151.pdb 1 SRLVVVSNRIAP-------AGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNI 53 RLVVVSNRIAP GLAVGILGALKAAGGLWFGWSGETGN QPLKKVKKGNI usage_00101.pdb 60 TWASFNLS 67 usage_00102.pdb 60 TWASFNLS 67 usage_00103.pdb 60 TWASFNLS 67 usage_00104.pdb 60 TWASFNLS 67 usage_00129.pdb 60 TWASFNLS 67 usage_00130.pdb 57 TWASFNLS 64 usage_00131.pdb 49 TWASFN-- 54 usage_00148.pdb 56 TWASFN-- 61 usage_00149.pdb 55 TWASFN-- 60 usage_00150.pdb 56 TWASFN-- 61 usage_00151.pdb 54 TWASFN-- 59 TWASFN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################