################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:39 2021 # Report_file: c_0415_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00018.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00095.pdb # 5: usage_00122.pdb # # Length: 84 # Identity: 10/ 84 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 84 ( 31.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 84 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 KYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIAR--H-- 55 usage_00027.pdb 1 KYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIAR--H-- 55 usage_00028.pdb 1 KYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIAR--H-- 55 usage_00095.pdb 1 AFLVIRKMGDGTFGRVLLCQHID-NKKYYAVKVVRNIKKYTRSAKIEADILKKIQ--NDD 57 usage_00122.pdb 1 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPD 60 y i lG G FG V Cv kk y K vk k Ei iL usage_00018.pdb 56 ---RNILHLHESFESMEELVMI-- 74 usage_00027.pdb 56 ---RNILHLHESFESMEELVMIFE 76 usage_00028.pdb 56 ---RNILHLHESFESMEELVMIFE 76 usage_00095.pdb 58 INNNNIVKYHGKFMYYDHMCLIFE 81 usage_00122.pdb 61 N-KNLCVQMFDWFDYHGHMCISFE 83 ni h F i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################