################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:12 2021 # Report_file: c_1045_65.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00031.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00084.pdb # 5: usage_00085.pdb # 6: usage_00194.pdb # 7: usage_00198.pdb # 8: usage_00257.pdb # 9: usage_00277.pdb # 10: usage_00278.pdb # 11: usage_00775.pdb # 12: usage_00776.pdb # 13: usage_00777.pdb # 14: usage_00778.pdb # # Length: 35 # Identity: 12/ 35 ( 34.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 35 ( 45.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 35 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVII- 29 usage_00033.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 usage_00034.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVII- 29 usage_00084.pdb 1 GVVIESTGVFTDAD----KAKAH-LEGGAKKVIIT 30 usage_00085.pdb 1 GVVIESTGVFTDAD----KAKAH-LEGGAKKVIIT 30 usage_00194.pdb 1 DVVIEATGVFRDRE----NASKH-LQGGAKKVIIT 30 usage_00198.pdb 1 DVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILT 35 usage_00257.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVII- 29 usage_00277.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 usage_00278.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 usage_00775.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 usage_00776.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVII- 29 usage_00777.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 usage_00778.pdb 1 DIVVESTGRFTKRE----DAAKH-LEAGAKKVIIS 30 V EsTG F a H l GAKKVIi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################