################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:41 2021 # Report_file: c_1416_41.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00179.pdb # 2: usage_00339.pdb # 3: usage_00340.pdb # 4: usage_00341.pdb # 5: usage_00342.pdb # 6: usage_00343.pdb # 7: usage_00344.pdb # 8: usage_00662.pdb # 9: usage_00663.pdb # 10: usage_00664.pdb # 11: usage_00665.pdb # # Length: 51 # Identity: 47/ 51 ( 92.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 51 ( 94.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 51 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 STSVAKLIEELSKLPGIGPGTAQRLAFFIINMPLDEVRSLSQAIIEAKE-- 49 usage_00339.pdb 1 STSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKL 51 usage_00340.pdb 1 STSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 50 usage_00341.pdb 1 -TSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKL 50 usage_00342.pdb 1 STSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 50 usage_00343.pdb 1 STSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKE-- 49 usage_00344.pdb 1 -TSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 49 usage_00662.pdb 1 -TSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 49 usage_00663.pdb 1 -TSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 49 usage_00664.pdb 1 -TSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKL 50 usage_00665.pdb 1 STSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEK- 50 TSVAKLIEELSKLPGIGPkTAQRLAFFIINMPLDEVRSLSQAIIEAKE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################