################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:55 2021 # Report_file: c_1254_34.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00138.pdb # 2: usage_00217.pdb # 3: usage_00296.pdb # 4: usage_00334.pdb # 5: usage_00415.pdb # 6: usage_00759.pdb # 7: usage_00808.pdb # 8: usage_00817.pdb # 9: usage_00857.pdb # 10: usage_00858.pdb # 11: usage_00971.pdb # 12: usage_00991.pdb # 13: usage_01126.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 50 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 50 ( 62.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00217.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00296.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00334.pdb 1 ---SGFTFHIEVSR--------DNWQELIQSI------KAKGMRPGVSLR 33 usage_00415.pdb 1 -----RRVALTSQ-S-------ASVALLEVLL------RQKGLSPVLER- 30 usage_00759.pdb 1 --RVSVLIGGN------EIYGAQFTPLLAEIS------RH-PLDIYEFP- 34 usage_00808.pdb 1 LKTAPVIVWFRKD-L-----RLSD-NLALLAA------VEHGGPVIPV-Y 36 usage_00817.pdb 1 ---RRMVVVVSDD-YLQS--KEDFQ-TFALSLSPGAHQKRLI-PI----- 37 usage_00857.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00858.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00971.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_00991.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 usage_01126.pdb 1 ---RVVAILLNDE-V-----RSADLLAILKAL------KAKGVHAKLLYS 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################