################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:46 2021 # Report_file: c_1478_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00030.pdb # 3: usage_00048.pdb # 4: usage_00079.pdb # 5: usage_00184.pdb # 6: usage_00203.pdb # 7: usage_00209.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 35 ( 8.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 35 ( 31.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 SDEDWDAVLTVNLTSVFNL-TRELTHPMMRRR--- 31 usage_00030.pdb 1 -AAAWDRIMAVNVTGTFLA-SKAALAGMLERH--- 30 usage_00048.pdb 1 -RVADIDSALDINLKGQLYLTKLVTAKLLKR---- 30 usage_00079.pdb 1 -DEEWNDIIETNLSSVFRL-SKAVMRAMMKKR--- 30 usage_00184.pdb 1 -AAAWDRIMAVNVTGTFLA-SKAALAGMLERH--- 30 usage_00203.pdb 1 PTEKWDAILALNLSAVFHG-TAAALPHMKKQG--- 31 usage_00209.pdb 1 SEDEWQSVINTNLSSIFR--SKECVRG-----KKR 28 w n f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################