################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:30 2021 # Report_file: c_0760_80.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00471.pdb # 2: usage_00473.pdb # 3: usage_00661.pdb # 4: usage_00665.pdb # 5: usage_00780.pdb # 6: usage_00781.pdb # # Length: 99 # Identity: 44/ 99 ( 44.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 99 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 99 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00471.pdb 1 VPHPWLNLFVPASRIADFDRGVFRGVL----GGPVLIYPMNKHKWDPRSSAVTPDEEVFY 56 usage_00473.pdb 1 VPHPWLNLFVPASRIADFDRGVFRGVL----GGPVLIYPMNKHKWDPRSSAVTPDEEVFY 56 usage_00661.pdb 1 VPHPWLNLFVPASRIADFDRGVFRGVL---AGGPVLIYPMNKHKWDPRSSAVTPDEEVFY 57 usage_00665.pdb 1 VPHPWLNLFVPASRIADFDRGVFRGVL----GGPVLIYPMNKHKWDPRSSAVTPDEEVFY 56 usage_00780.pdb 1 VPHPWLNLLIPRSSIRRFATEVFGRILKDSNNGPILLYPVNKSKWDNKTSVVIPDEEIFY 60 usage_00781.pdb 1 VPHPWLNLLIPRSSIRRFATEVFGRILKDSNNGPILLYPVNKSKWDNKTSVVIPDEEIFY 60 VPHPWLNL P S I F VF L GP L YP NK KWD S V PDEE FY usage_00471.pdb 57 LVAFLRSAL-PGAPE----SLEALARQNQRILDFCAGTG 90 usage_00473.pdb 57 LVAFLRSAL-PGAPE----SLEALARQNQRILDFCAGTG 90 usage_00661.pdb 58 LVAFLRSAL-PGAPE----SLEALARQNQRILDFCAGTG 91 usage_00665.pdb 57 LVAFLRSAL-PGAPE----SLEALARQNQRILDFCAGTG 90 usage_00780.pdb 61 LVGFLSSAPSL----SGHGSIAHAMSLNSQIVEFCEEAD 95 usage_00781.pdb 61 LVGFLSSAPSL----SGHGSIAHAMSLNSQIVEFCEE-- 93 LV FL SA S N I FC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################