################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:14 2021 # Report_file: c_1373_152.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00867.pdb # 2: usage_01294.pdb # 3: usage_01295.pdb # 4: usage_01296.pdb # 5: usage_01428.pdb # 6: usage_01454.pdb # # Length: 92 # Identity: 6/ 92 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 92 ( 16.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 92 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00867.pdb 1 -LHRALTLRFLLQHLGRVARRAPALGP----AVRALGATFGPLLLRP------------- 42 usage_01294.pdb 1 PPPNRDTMKVLFGHLTKIVAKAS----KNLMSTQSLGIVFGPTLLR-AENETGNMAI--- 52 usage_01295.pdb 1 PPPNRDTMKVLFGHLTKIVAKAS----KNLMSTQSLGIVFGPTLLR-AENETGNMAI--- 52 usage_01296.pdb 1 PPPNRDTMKVLFGHLTKIVAKAS----KNLMSTQSLGIVFGPTLLR-AENETGNMAI--- 52 usage_01428.pdb 1 PDAQYWTLRALVFHLKRVLAHEA----QNRMNLRALCIIWGPTIAP-A---------NPD 46 usage_01454.pdb 1 PEANHNSLERLIFHLVKVALLED----VNRMSPGALAIIFAPCLLR-CS-DPLTSMK--- 51 t L HL L i fgP llr usage_00867.pdb 43 ---SPDFPALLVEKLLQEHLE----------- 60 usage_01294.pdb 53 ---HMVYQNQIAELMLSEY------------- 68 usage_01295.pdb 53 ---HMVYQNQIAELMLSEY------------- 68 usage_01296.pdb 53 ---HMVYQNQIAELMLSEY------------- 68 usage_01428.pdb 47 DANDVNFQIMAMEVLLEV-------------- 64 usage_01454.pdb 52 ---DVLKITTCVEMLIKEQMRKYKVKMEEISQ 80 E l e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################