################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:44 2021 # Report_file: c_0243_27.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00060.pdb # 2: usage_00088.pdb # 3: usage_00096.pdb # 4: usage_00180.pdb # 5: usage_00181.pdb # 6: usage_00269.pdb # 7: usage_00289.pdb # # Length: 132 # Identity: 9/132 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/132 ( 19.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/132 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 --TVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVS-DALAFLEADNTVDLILLDV-- 55 usage_00088.pdb 1 --ANVLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQ-RGLLEAAT-RKPDLIILDLGL 54 usage_00096.pdb 1 AMANVLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQ-RGLLEAAT-RKPDLIILDLGL 56 usage_00180.pdb 1 --GKIYIVEDDMTIVSLLKDHLSASY---HVSSV-SNFRDVKQEIIA-FQPDLILMDITL 53 usage_00181.pdb 1 --GKIYIVEDDMTIVSLLKDHLSASY---HVSSV-SNFRDVKQEIIA-FQPDLILMDITL 53 usage_00269.pdb 1 --ANVLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQ-RGLLEAAT-RKPDLIILALG- 53 usage_00289.pdb 1 --MKILVIEDDALLLQGLILAMQSEG--YVCDGVSTAH-EAALSLAS-NHYSLIVLDLGL 54 iveD i l l v dLI d usage_00060.pdb 56 ---A-IDGLVRLKR-FDPSNAVALIHE-------L---IRAALEAGADGFIPKSADPQVL 100 usage_00088.pdb 55 PDGDGIEFIRDLRQ-WS-AVPVIVL--SA---RSEESDKIAALDAGADDYLSKPFGIGEL 107 usage_00096.pdb 57 PDGDGIEFIRDLRQ-WS-AVPVIVL--SA---RSEESDKIAALDAGADDYLSKPFGIGEL 109 usage_00180.pdb 54 PYFNGFYWTAELRK-FL-TIPIIFI--SSSNDEMD---MVMALNMGGDDFISKPFSLAVL 106 usage_00181.pdb 54 PYFNGFYWTAELRK-FL-TIPIIFI--SSSNDEMD---MVMALNMGGDDFISKPFSLAVL 106 usage_00269.pdb 54 ----GIEFIRDLRQ-WS-AVPVIVL--SA---RSEESDKIAALDAGADDYLSKPFGIGEL 102 usage_00289.pdb 55 PDEDGLHFLSRMRREKM-TQPVLIL--TA---RDTLEDRISGLDTGADDYLVKPFALEEL 108 lr p aL G Dd Kpf L usage_00060.pdb 101 IHAVSLILEG-- 110 usage_00088.pdb 108 QARLRVALRRHS 119 usage_00096.pdb 110 QARLRVAL---- 117 usage_00180.pdb 107 DAKLTAILR--- 115 usage_00181.pdb 107 DAKLTAILR--- 115 usage_00269.pdb 103 QARLRVALR--- 111 usage_00289.pdb 109 NARIRALLRRHN 120 a L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################