################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:11 2021 # Report_file: c_0463_80.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00107.pdb # 4: usage_00147.pdb # 5: usage_00148.pdb # 6: usage_00557.pdb # # Length: 85 # Identity: 24/ 85 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 85 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 85 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 --CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 58 usage_00014.pdb 1 -KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 59 usage_00107.pdb 1 -KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG---CGAAACRVDVS 56 usage_00147.pdb 1 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 60 usage_00148.pdb 1 ---AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 57 usage_00557.pdb 1 -KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS 59 aI TGaGaGIG A A Ga Vvv DInadAA v I g A acr D usage_00013.pdb 59 SEQELSALADFAISKLGKVDILVN- 82 usage_00014.pdb 60 SEQELSALADFAISKLGKVDILVNN 84 usage_00107.pdb 57 DEQQIIAMVDACVAAFGGVDKLVAN 81 usage_00147.pdb 61 SEQELSALADFAISKLGKVDILVN- 84 usage_00148.pdb 58 SEQELSALADFAISKLGKVDILVNN 82 usage_00557.pdb 60 DPESAKAMADRTLAEFGGIDYLVNN 84 eq A aD G vD LVn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################