################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:06 2021 # Report_file: c_1138_35.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00064.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00347.pdb # 5: usage_00348.pdb # 6: usage_00349.pdb # 7: usage_00350.pdb # 8: usage_00351.pdb # 9: usage_00352.pdb # 10: usage_00353.pdb # 11: usage_00354.pdb # 12: usage_00355.pdb # 13: usage_00356.pdb # 14: usage_00357.pdb # 15: usage_00358.pdb # 16: usage_00359.pdb # # Length: 126 # Identity: 79/126 ( 62.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/126 ( 72.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/126 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 YLIQMYIPSLLIVILSWISFW----AP-ARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00345.pdb 1 --IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 58 usage_00346.pdb 1 --IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 58 usage_00347.pdb 1 --IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 58 usage_00348.pdb 1 --IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 58 usage_00349.pdb 1 --IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 58 usage_00350.pdb 1 -----YIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00351.pdb 1 -----YIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00352.pdb 1 -----YIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00353.pdb 1 -----YIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00354.pdb 1 -----YIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 55 usage_00355.pdb 1 ------IPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 54 usage_00356.pdb 1 ------IPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 54 usage_00357.pdb 1 ------IPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 54 usage_00358.pdb 1 ------IPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 54 usage_00359.pdb 1 ------IPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKA 54 IPSLLIVILSWvSFW Aa ARVGLGITTVLTMTTQSSGSRASLPKVSYVKA usage_00064.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFVSRQS---QPQRAKKIDKISRIG------------- 99 usage_00345.pdb 59 IDIWMAVCLLFVFSALLEYAAVNFIAR---KLFISRAKRIDTVSRVAFPLVFLIFNIF-- 113 usage_00346.pdb 59 IDIWMAVCLLFVFSALLEYAAVNFIAR---KLFISRAKRIDTVSRVAFPLVFLIFNIF-- 113 usage_00347.pdb 59 IDIWMAVCLLFVFSALLEYAAVNFIAR---KLFISRAKRIDTVSRVAFPLVFLIFNIF-- 113 usage_00348.pdb 59 IDIWMAVCLLFVFSALLEYAAVNFIAR---KLFISRAKRIDTVSRVAFPLVFLIFNIF-- 113 usage_00349.pdb 59 IDIWMAVCLLFVFSALLEYAAVNFIAR---KLFISRAKRIDTVSRVAFPLVFLIFNIF-- 113 usage_00350.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFIARA--KLFISRAKRIDTVSRVAFPLVFLIFNIFYW 113 usage_00351.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFIARA--KLFISRAKRIDTVSRVAFPLVFLIFNIFYW 113 usage_00352.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFIARA--KLFISRAKRIDTVSRVAFPLVFLIFNIFYW 113 usage_00353.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFIARA--KLFISRAKRIDTVSRVAFPLVFLIFNIFYW 113 usage_00354.pdb 56 IDIWMAVCLLFVFSALLEYAAVNFIARA--KLFISRAKRIDTVSRVAFPLVFLIFNIFYW 113 usage_00355.pdb 55 IDIWMAVCLLFVFSALLEYAAVNFIARAGTKLFISRAKRIDTVSRVAFPLVFLIFNIFY- 113 usage_00356.pdb 55 IDIWMAVCLLFVFSALLEYAAVNFIARAGTKLFISRAKRIDTVSRVAFPLVFLIFNIFY- 113 usage_00357.pdb 55 IDIWMAVCLLFVFSALLEYAAVNFIARAGTKLFISRAKRIDTVSRVAFPLVFLIFNIFY- 113 usage_00358.pdb 55 IDIWMAVCLLFVFSALLEYAAVNFIARAGTKLFISRAKRIDTVSRVAFPLVFLIFNIFY- 113 usage_00359.pdb 55 IDIWMAVCLLFVFSALLEYAAVNFIARAGTKLFISRAKRIDTVSRVAFPLVFLIFNIFY- 113 IDIWMAVCLLFVFSALLEYAAVNFiaR fisRAKrIDtvSRva usage_00064.pdb ------ usage_00345.pdb ------ usage_00346.pdb ------ usage_00347.pdb ------ usage_00348.pdb ------ usage_00349.pdb ------ usage_00350.pdb 114 ITYKLV 119 usage_00351.pdb 114 ITYKLV 119 usage_00352.pdb 114 ITYKLV 119 usage_00353.pdb 114 ITYKLV 119 usage_00354.pdb 114 ITYKLV 119 usage_00355.pdb ------ usage_00356.pdb ------ usage_00357.pdb ------ usage_00358.pdb ------ usage_00359.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################