################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:12 2021 # Report_file: c_1484_20.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_01229.pdb # 2: usage_02944.pdb # 3: usage_03517.pdb # 4: usage_03518.pdb # 5: usage_03934.pdb # 6: usage_03952.pdb # 7: usage_03953.pdb # 8: usage_03954.pdb # 9: usage_04379.pdb # 10: usage_04863.pdb # # Length: 66 # Identity: 10/ 66 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 66 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 66 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01229.pdb 1 S-TDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLK 59 usage_02944.pdb 1 S-TEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLK 59 usage_03517.pdb 1 H-SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 59 usage_03518.pdb 1 --SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 58 usage_03934.pdb 1 H-SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 59 usage_03952.pdb 1 H-SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 59 usage_03953.pdb 1 H-SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 59 usage_03954.pdb 1 H-SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 59 usage_04379.pdb 1 -S-EKVEALNRQINAEIYSAYLYLSA-SYFDS--IGLKGFSNW-RVQWQEEL-HA-K-FD 51 usage_04863.pdb 1 --SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMK 58 eaAvNr Nl l asYtY S FDr vaL v f e E r a k usage_01229.pdb 60 MQNQRG 65 usage_02944.pdb 60 MQNQRG 65 usage_03517.pdb 60 YQNKRG 65 usage_03518.pdb 59 YQNKRG 64 usage_03934.pdb 60 YQNKRG 65 usage_03952.pdb 60 YQNKRG 65 usage_03953.pdb 60 YQNK-- 63 usage_03954.pdb 60 YQNKRG 65 usage_04379.pdb 52 FVSERG 57 usage_04863.pdb 59 YQNKRG 64 qn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################