################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:10 2021 # Report_file: c_0328_60.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00390.pdb # 4: usage_00391.pdb # 5: usage_00392.pdb # 6: usage_00393.pdb # 7: usage_00394.pdb # 8: usage_00401.pdb # # Length: 237 # Identity: 57/237 ( 24.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/237 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 94/237 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 ----------------------PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL 38 usage_00014.pdb 1 ----------------------PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL 38 usage_00390.pdb 1 EVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTL 60 usage_00391.pdb 1 ----------------------ALRLTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSG 38 usage_00392.pdb 1 ----------------------ALRLTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSG 38 usage_00393.pdb 1 VPLCKQALEDLEKTSG---HDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL 57 usage_00394.pdb 1 -----------------------------------------YKEAAHLLNDALAIREKTL 19 usage_00401.pdb 1 -----------------------ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTS 37 usage_00013.pdb 39 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC 98 usage_00014.pdb 39 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC 98 usage_00390.pdb 61 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC 120 usage_00391.pdb 39 H-DHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLY 97 usage_00392.pdb 39 H-DHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLY 97 usage_00393.pdb 58 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC 117 usage_00394.pdb 20 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC 79 usage_00401.pdb 38 GHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLY 97 DHP VA LN LA Y KYK A L AL IREK LGK HP VA L NLA L usage_00013.pdb 99 QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 158 usage_00014.pdb 99 QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 158 usage_00390.pdb 121 QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 180 usage_00391.pdb 98 GKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALE 157 usage_00392.pdb 98 GKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALE 157 usage_00393.pdb 118 QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 177 usage_00394.pdb 80 QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 139 usage_00401.pdb 98 GKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 157 GK E E RALEI LG P VAK NLA QGK E Y L usage_00013.pdb 159 RAHEKEFGSVNGDNK---------PIWMHAEEREES--------------------- 185 usage_00014.pdb 159 RAHEKEFGSVNGDNK---------PIWMHAEEREESK-------------------- 186 usage_00390.pdb 181 RAHEK---------------------------------------------------- 185 usage_00391.pdb 158 IYATRL----GPDDPNVAKTKNNLASCYLKQG------------------------- 185 usage_00392.pdb 158 IYATRL----GPDDPNVAKTKNNLASCYLKQ-------------------------- 184 usage_00393.pdb 178 RAHEK---------------------------------------------------- 182 usage_00394.pdb 140 RAHEKEFGSVNGDNK---------PIWMHAEEREESKDKRRDSAPYGEYGSWYKACK 187 usage_00401.pdb 158 IYQTKL----GPDDPNVAKTKNNLASCYLKQG------------------------- 185 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################