################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:49 2021 # Report_file: c_0571_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00429.pdb # 6: usage_00432.pdb # 7: usage_00665.pdb # # Length: 112 # Identity: 8/112 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/112 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/112 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 ---VLEQIDQGSILKLPSN--LLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRG 55 usage_00013.pdb 1 -----EQIDQGSILKLPSN--LLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRG 53 usage_00014.pdb 1 EGSVLEQIDQGSILKLPSN--LLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRG 58 usage_00015.pdb 1 -GSVLEQIDQGSILKLPSN--LLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRG 57 usage_00429.pdb 1 -VIGAVFDEGVITLRVPSE--VLFAPG-AVELAPGADRVLATLKDLFIRRR-EQNINIKG 55 usage_00432.pdb 1 -HLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIP--NRISLAG 57 usage_00665.pdb 1 ---VLEQIDQGSILKLPSN--LLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRG 55 g l ps lf s m ia p In G usage_00012.pdb 56 FTD----DTPL-VKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG- 101 usage_00013.pdb 54 FTD----DTPL-VKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG- 99 usage_00014.pdb 59 FTD----DTPL-VKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG- 104 usage_00015.pdb 58 FTD----DTPL-VKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG- 103 usage_00429.pdb 56 FTD----DVQPSANARFKDNWEVSALRSVNVLRYFLGAGIEPARLTATG--- 100 usage_00432.pdb 58 HTDDFPYANGE-KG---YSNWELSADRANASRRELVAGGLDNGKVLRVVGMA 105 usage_00665.pdb 56 FTD----DTPL-VKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG- 101 fTD d ks El A Ra v l G p l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################