################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:41 2021 # Report_file: c_0794_44.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00090.pdb # 2: usage_00318.pdb # 3: usage_00319.pdb # 4: usage_00324.pdb # 5: usage_00325.pdb # 6: usage_00493.pdb # # Length: 82 # Identity: 0/ 82 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 82 ( 12.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 82 ( 48.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 ----ELIFIAT-----GSEVELAVAAYE--KLTAEGVKARVVSM--P--STDAFDKQDAA 45 usage_00318.pdb 1 ----KLAIVFY--SSTGTGYAMAQEAAE--AGRAAGAEVRLLKV--RETAPQDVIDGQDA 50 usage_00319.pdb 1 ----KLAIVFY--SSTGTGYAMAQEAAE--AGRAAGAEVRLLKV--RETAPQDVIDGQDA 50 usage_00324.pdb 1 ----KLAIVFY--SSTGTGYA-AQEAAE--AGRAAGAEVRLLKV--RETAPQDVIDGQDA 49 usage_00325.pdb 1 ---VKLAIVFY--SSTGTGYA-AQEAAE--AGRAAGAEVRLLKV--RETAPQDVIDGQDA 50 usage_00493.pdb 1 RVTVFPIGIGDRY-----DAAQLRILAGPAGDS----NVVKLQRIE----DLPTMVTLGN 47 l a a aae vr l a usage_00090.pdb 46 YRESVL---------------- 51 usage_00318.pdb 51 WKANIEAMK------------- 59 usage_00319.pdb 51 WKANIEAMKDVPEATPADLEWA 72 usage_00324.pdb 50 WKANIEAK-------------- 57 usage_00325.pdb 51 WKANIEAK-------------- 58 usage_00493.pdb 48 SFLHKLCS-------------- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################