################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:31 2021 # Report_file: c_1265_86.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00057.pdb # 2: usage_00062.pdb # 3: usage_00182.pdb # 4: usage_00183.pdb # 5: usage_00347.pdb # 6: usage_00514.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 60 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 60 ( 75.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 -------RVVMMS-------PQGAT---LNH-DK-VMRFAAE----PGLILL-CGRY--- 33 usage_00062.pdb 1 -TIHTY----HSE----GAGGG--HAP---------DIIKVCGIKNVLPSST-N------ 33 usage_00182.pdb 1 ------ALVVINP----GNPTG--QV--LAEENQ-YDIVKFCKNEGLVLLAD-E------ 38 usage_00183.pdb 1 ------ALVVINP----GNPTG--QV-LAEE-NQ-YDIVKFCKNEGLVLLAD-E------ 38 usage_00347.pdb 1 AKI---VLVLYDAGKLY-----------GCTENKL-GIANWLKDQ--GHELITT------ 37 usage_00514.pdb 1 --Q---PLLVRPQ-----GDGY--E---LVA--G-ERRYRAALMAGLQEVPA-V---VKD 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################