################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:43:04 2021 # Report_file: c_0112_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00039.pdb # 5: usage_00110.pdb # 6: usage_00152.pdb # 7: usage_00159.pdb # 8: usage_00183.pdb # 9: usage_00213.pdb # 10: usage_00236.pdb # 11: usage_00239.pdb # 12: usage_00265.pdb # # Length: 106 # Identity: 58/106 ( 54.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/106 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/106 ( 1.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -IVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 59 usage_00006.pdb 1 DIVLTQSPASLSASVGETVTITCRAGGNTHNYLAWYQQKQGKSPQLLVYYTTTLAAGVPS 60 usage_00007.pdb 1 DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 60 usage_00039.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASGNIHNYLAWYQQKPGKAPKLLIYYTTTLADGVPS 60 usage_00110.pdb 1 DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 60 usage_00152.pdb 1 DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 60 usage_00159.pdb 1 -IVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 59 usage_00183.pdb 1 --QMTQSPASLSVSVGETVTITCRASENIYRTLAWYLQKQGKSPQLLVYGATTLADGVPS 58 usage_00213.pdb 1 --QLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPS 58 usage_00236.pdb 1 -IQMTQSPASLSASVGETVTITCRASENIYSYLTWYQQKQGKSPQLLVYNAKTLTEGVPS 59 usage_00239.pdb 1 DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS 60 usage_00265.pdb 1 -IQMTQSPASLSVSVGETVTITCRASENIYSNLVWYQQKQGKSPQVLVYAATNLPDGVPS 59 TQSPaSLS SVGetVTITCRAs Ni L WYqQKqGKsPqlLvY tL GVPS usage_00005.pdb 60 RFSGSGSGTQYSLKINSLQPDDFGSYYCQHFWSTSRTFGGGTKLEI 105 usage_00006.pdb 61 RFSGSGSGTQYSLKINSLQPDDFGSYYCQHFWSTPRSFGGGTKLEI 106 usage_00007.pdb 61 RFSGSGSGTQYSLKINSLQPDDFGSYYCQHFWSTPRTFGGGTKLEI 106 usage_00039.pdb 61 RFSGSGSGTDYTFTISSLQPEDIATYYCQHFWSTPRTFGQGTKVEI 106 usage_00110.pdb 61 RFSGSGSGTQYSLKINSLQPEDFGSYYCQHFFSTPRTFGGGTKLEI 106 usage_00152.pdb 61 RFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEI 106 usage_00159.pdb 60 RFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEI 105 usage_00183.pdb 59 RFSGSGSGTQYYLKINSLQSEDFGTYHCQHFWGTPWTFGGGTKVEI 104 usage_00213.pdb 59 RFSGSGSGTQYSLKINSLQPEDFGNYYCQHFWSTPWTFGGGTKLEL 104 usage_00236.pdb 60 RFSGSGSGTQFSLKINSLQPEDFGGYFCQHHYGTPPTFGGGTKLEV 105 usage_00239.pdb 61 RFSGSGSGTQYSLKINSLQPDDFGSYYCQHFWSTPRTFGGGTKLEI 106 usage_00265.pdb 60 RFSGSGSGTQYSLKINSLQSEDSGSYYCQHFWETPFTFGSGTKLEI 105 RFSGSGSGTqy lkInSLQ D g Y CQHf Tp tFG GTK E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################