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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:46:04 2021
# Report_file: c_0056_3.html
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#====================================
# Aligned_structures: 8
#   1: usage_00001.pdb
#   2: usage_00003.pdb
#   3: usage_00004.pdb
#   4: usage_00005.pdb
#   5: usage_00006.pdb
#   6: usage_00010.pdb
#   7: usage_00013.pdb
#   8: usage_00014.pdb
#
# Length:        189
# Identity:       42/189 ( 22.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     51/189 ( 27.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           31/189 ( 16.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  -----IGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEK   55
usage_00003.pdb         1  -----IGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEF-QLAKEK   54
usage_00004.pdb         1  -----------LLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEAL   49
usage_00005.pdb         1  -----IGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEAL   55
usage_00006.pdb         1  -VSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELVEKAKEK   59
usage_00010.pdb         1  KVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHG-D   59
usage_00013.pdb         1  KVSGKLQALTNLLPKVDKLIIGGG-AFTFLKALGYDIGNSLLEEELLEEANKILTKGKNL   59
usage_00014.pdb         1  KVSGKLQALTNLLPKVDKLIIGGG-AFTFLKALGYDIGNSLLEEELLEEANKILTKGKNL   59
                                      L    D   IGG  a TF KAlG   G Sl Ee     A          

usage_00001.pdb        56  GVRFYMPVDVVVADRFANDANTKVVPID-AIPADWSALDIGPKTRELYRDVIRESKLVVW  114
usage_00003.pdb        55  GVNFY-PVDVVITEEFSETATTKIVGID-SIPSNWEGVDIGPKTREIYADVIKNSKLVVW  112
usage_00004.pdb        50  GVRVYLPEDVVAAERIEAGVETRVFPAR-AIPVPYMGLDIGPKTREAFARALEGARTVFW  108
usage_00005.pdb        56  GVRVYLPEDVVAAERIEAGVETRVFPAR-AIPVPYMGLDIGPKTREAFARALEGARTVFW  114
usage_00006.pdb        60  GVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVW  119
usage_00010.pdb        60  --KIVLPVDTKVAKEFSNDAKITVVPSD-SIPADQEGMDIGPNTVKLFADELEGAHTVVW  116
usage_00013.pdb        60  GVKIYLPVDVVAAPACSQDVP-KFVPAQ-EIPNGW-GLDIGPASVRLFKEVISDAQTIWW  116
usage_00014.pdb        60  GVKIYLPVDVVAAPACSQDVP-KFVPAQ-EIPNGW-GLDIGPASVRLFKEVISDAQTIWW  116
                                 P D v a                 IP    g DIGP                 W

usage_00001.pdb       115  NGPMGVFEMDAFAHGTKAIAEALAEA--LDTYSVIGGGDSAAAVEKFGLADKMDHISTGG  172
usage_00003.pdb       113  NGP-GVF-ETPFAEGTKAVGQALADA--EGTYSVIGGGDSAAAVEKFGA-DKSHIST-GG  166
usage_00004.pdb       109  NGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGLKERFGHVSTGG  166
usage_00005.pdb       115  NGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGLKERFGHVSTGG  172
usage_00006.pdb       120  NGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGG  179
usage_00010.pdb       117  NGPMGVFEFSNFAQGTIGVCKAIANL--KDAITIIGGGDSAAAAISLGFENDFTHISTGG  174
usage_00013.pdb       117  NGP-GVFEIDKFSKGSIK-SHYIS-E--GHATSVVGGGDTADVVARAGDADETFIST-GG  170
usage_00014.pdb       117  NGP-GVFEIDKFSKGSIK-SHYIS-E--GHATSVVGGGDTADVVARAGDADETFIST-G-  169
                           NGP GVF    F  G                  v GGGD    v   G          G 

usage_00001.pdb       173  GASLEFME-  180
usage_00003.pdb       167  GASLEFE--  173
usage_00004.pdb       167  GASLEFLEK  175
usage_00005.pdb       173  GASLEFLEK  181
usage_00006.pdb       180  GASLEFL--  186
usage_00010.pdb       175  GASLEYLE-  182
usage_00013.pdb       171  GASLELIE-  178
usage_00014.pdb       170  GASLELIEG  178
                           GASLE    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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