################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:29 2021 # Report_file: c_0971_61.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00218.pdb # 2: usage_00219.pdb # 3: usage_00257.pdb # 4: usage_00332.pdb # 5: usage_00333.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 69 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 69 ( 63.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00218.pdb 1 GGAGYDNITGSF--TAPSYTVG-----DSKYNN-VGGAID-ALNQADQALNSKIDNVSNK 51 usage_00219.pdb 1 GNAKVNA-DGTI--TGPTYNVA-----QGNQTN-VGDALT-ALDNAINTAATTSK----- 45 usage_00257.pdb 1 --------VAFIISDFESVSKITKSGVKVSVYAVPDKINQA----D-------------- 34 usage_00332.pdb 1 GGATYDPATGAI--SAPSYTTYNANGTTATNTS-VGAAID-NINANG------------- 43 usage_00333.pdb 1 GGATYDPATGAI--SAPSYTTYNANGTTATNTS-VGAAID-NINANG------------- 43 g i psy vg a usage_00218.pdb 52 LDNAFRITN 60 usage_00219.pdb --------- usage_00257.pdb --------- usage_00332.pdb --------- usage_00333.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################