################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:12 2021 # Report_file: c_0378_24.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00618.pdb # 2: usage_00620.pdb # 3: usage_00621.pdb # 4: usage_00622.pdb # # Length: 91 # Identity: 74/ 91 ( 81.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 91 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 91 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00618.pdb 1 ----SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK 56 usage_00620.pdb 1 ----SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK 56 usage_00621.pdb 1 SKAPSFWYKID-P----YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK 55 usage_00622.pdb 1 ----SFWYKI--SHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK 54 SFWYKI s YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK usage_00618.pdb 57 LTVNLTNDRYLATLTVRNLVGKSDA------ 81 usage_00620.pdb 57 LTVNLTNDRYLATLTVRNLVGKSDAAVLTIP 87 usage_00621.pdb 56 LTVNLTNDRYLATLTVRNLVGKSDAAVLTIP 86 usage_00622.pdb 55 LTVNLTNDRYLATLTVRNLVGKSDAAVLTIP 85 LTVNLTNDRYLATLTVRNLVGKSDA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################