################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:11 2021 # Report_file: c_1452_388.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00166.pdb # 2: usage_01972.pdb # 3: usage_01973.pdb # 4: usage_02348.pdb # 5: usage_02349.pdb # 6: usage_02607.pdb # 7: usage_02608.pdb # 8: usage_03669.pdb # 9: usage_05095.pdb # 10: usage_05096.pdb # # Length: 23 # Identity: 6/ 23 ( 26.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 23 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 23 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 DYDVVKVIGRGAFGEVQLVRHKA 23 usage_01972.pdb 1 DFNFLMVLGKGSFGKVMLSERK- 22 usage_01973.pdb 1 DFNFLMVLGKGSFGKVMLSERK- 22 usage_02348.pdb 1 DFELHKMLGKGSFGKVFLAEF-- 21 usage_02349.pdb 1 DFELHKMLGKGSFGKVFLAEFKK 23 usage_02607.pdb 1 QFELLKVLGQGSFGKVFLVKKIS 23 usage_02608.pdb 1 QFELLKVLGQGSFGKVFLVKKIS 23 usage_03669.pdb 1 DFNFLMVLGKGSFGKVMLADRKG 23 usage_05095.pdb 1 DFNFLMVLGKGSFGKVMLADRK- 22 usage_05096.pdb 1 DFNFLMVLGKGSFGKVMLADRKG 23 f lG GsFGkV L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################