################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:24:14 2021 # Report_file: c_0909_8.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00061.pdb # 6: usage_00062.pdb # 7: usage_00094.pdb # 8: usage_00097.pdb # 9: usage_00121.pdb # 10: usage_00123.pdb # 11: usage_00124.pdb # 12: usage_00126.pdb # 13: usage_00129.pdb # 14: usage_00136.pdb # 15: usage_00138.pdb # 16: usage_00146.pdb # 17: usage_00153.pdb # 18: usage_00156.pdb # 19: usage_00182.pdb # 20: usage_00183.pdb # # Length: 85 # Identity: 2/ 85 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 85 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 85 ( 56.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -----KIMEIKLIK-G-----PKGLGFSIAGG--V------G-N----Q--HIPGD-NSI 33 usage_00003.pdb 1 -----KIMEIKLIK-G-----PKGLGFSIAGG--V------G-N----Q--HIPGD-NSI 33 usage_00006.pdb 1 ---VGKRLNIQLKK-G-----TEGLGFSITSRD-V------T---I-G-------GSAPI 33 usage_00007.pdb 1 -----THRRVRLCK-YGTE--K-PLGFYIRDGSSVRVTPHG----LEK-------V-PGI 39 usage_00061.pdb 1 ---SMEYEEITLER-G-----NSGLGFSIAGG--T------D-N----P--HIGDD-PSI 35 usage_00062.pdb 1 ---AEKVMEIKLIK-G-----PKGLGFSIAGG--V------G-N----Q--HIPGD-NSI 35 usage_00094.pdb 1 ---AKQEIRVRVEK-D------PELGFSISGG--V------G-GR---GNPFRPDD-DGI 37 usage_00097.pdb 1 ---EFEFEEITLER-G-----NSGLGFSIAGG--T------D-N----P--HIGDD-PGI 35 usage_00121.pdb 1 -----TEEEINLTR-G-----PSGLGFNIVGG--T------D-Q----Q--YVSND-SGI 33 usage_00123.pdb 1 ---TREFLTFEVPL-N-D-SGSAGLGVSVKGNR-S--------K-ENH-------ADLGI 37 usage_00124.pdb 1 KPPAEKVMEIKLIK-G-----PKGLGFSIAGG--V------G-N----Q--HIPGD-NSI 38 usage_00126.pdb 1 -----KRLNIQLKK-G-----TEGLGFSITSRD-V------TI--G---------GSAPI 31 usage_00129.pdb 1 -----EYEEITLER-G-----NSGLGFSIAGG--T------D-N----P--HIGDD-PSI 33 usage_00136.pdb 1 ----RKLKEVRLDRLH-----PEGLGLSVRGG--L------E-F----G--------CGL 30 usage_00138.pdb 1 ---GSMEIRVRVEK-D------PELGFSISGG--V------G-GR---GNPFRPDD-DGI 37 usage_00146.pdb 1 -----DIFEVELAK-N-----DNSLGISVTGG--V------N-T----S--V--RH-GGI 31 usage_00153.pdb 1 ----MNIITVTLNM-E-K-Y-N-FLGISIVGQ--S------N-E---R-------GDGGI 32 usage_00156.pdb 1 -------LTVDVAG-P------APWGFRITGG--R------D-F----H--------TPI 25 usage_00182.pdb 1 ---LVTEEEINLTR-G-----PSGLGFNIVGG--T------D-Q----Q-----YD-SGI 32 usage_00183.pdb 1 ------IITVTLNE-K-----YNFLGISIVGQS-N------E---R---------GDGGI 29 lG i usage_00002.pdb 34 YVTKIIEGGAAHKDGKLQIGDKLLA 58 usage_00003.pdb 34 YVTKIIEGGAAHKDGKLQIGDKLLA 58 usage_00006.pdb 34 YVKNILPRGAAIQDGRLKAGDRLIE 58 usage_00007.pdb 40 FISRLVPGGLAQSTGLLAVNDEVLE 64 usage_00061.pdb 36 FITKIIPGGAAAQDGRLRVNDSILF 60 usage_00062.pdb 36 YVTKIIEGGAAHKDGRLQIGDKILA 60 usage_00094.pdb 38 FVTRVQPEGPAS--KLLQPGDKIIQ 60 usage_00097.pdb 36 FITKIIPGGAAAEDGRLRVNDCILR 60 usage_00121.pdb 34 YVSRIKENGAAALDGRLQEGDKILS 58 usage_00123.pdb 38 FVKSIINGGAASKDGRLRVNDQLIA 62 usage_00124.pdb 39 YVTKIIEGGAAHKDGRLQIGDKILA 63 usage_00126.pdb 32 YVKNILPRGAAIQDGRLKAGDRLIE 56 usage_00129.pdb 34 FITKIIPGGAAAQDGRLRVNDSILF 58 usage_00136.pdb 31 FISHLIKGGQADSVGLQVG------ 49 usage_00138.pdb 38 FVTRVQPEGPAS--KLLQPGDKIIQ 60 usage_00146.pdb 32 YVKAVIPQGAAESDGRIHKGDRVLA 56 usage_00153.pdb 33 YIGSIMKGGAVAADGRIEPGDMLLQ 57 usage_00156.pdb 26 MVTKVAERGKAKDADLRPG------ 44 usage_00182.pdb 33 YVSRIKENGAAALDGRLQEGDKILS 57 usage_00183.pdb 30 YIGSI-KGGAVAADGRIEPGDLLQ- 52 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################