################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:55 2021 # Report_file: c_0845_30.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00067.pdb # 2: usage_00069.pdb # 3: usage_00199.pdb # 4: usage_00200.pdb # # Length: 111 # Identity: 34/111 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/111 ( 36.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/111 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 ---------------------VLPFWENHSL-DS-EGGYFTCLDRQGKVYDTDKFIWLQN 37 usage_00069.pdb 1 ------NLQALAQLYKNALLNDVLPFWENHSLDS-EGGYFTCLDRQGKVYDTDKFIWLQN 53 usage_00199.pdb 1 MEKERETLQAWKERVGQELDRVMAFWLEHSH-DREHGGFFTCLGRDGRVYDDLKYVWLQG 59 usage_00200.pdb 1 MEKERETLQAWKERVGQELDRVMAFWLEHSH-DREHGGFFTCLGRDGRVYDDLKYVWLQG 59 v fw ehs D GG FTCL R G VYD K WLQ usage_00067.pdb 38 RQVWTFSMLCNQL---EKRENWLKIARNGAKFLAQHGRDD--EGNWYFALT 83 usage_00069.pdb 54 RQVWTFSMLCNQL---EKRENWLKIARNGAKFLAQHGRDD--EGNWYFALT 99 usage_00199.pdb 60 RQVWMYCRLYRKLERFH-RPELLDAAKAGGEFLLRHARVAPPEKKCAFVLT 109 usage_00200.pdb 60 RQVWMYCRLYRKLERFH-RPELLDAAKAGGEFLLRHARVAPPEKKCAFVLT 109 RQVW L L R L A G FL H R E F LT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################