################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:09 2021 # Report_file: c_1136_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00224.pdb # 2: usage_00277.pdb # 3: usage_00278.pdb # 4: usage_00366.pdb # 5: usage_00367.pdb # # Length: 74 # Identity: 52/ 74 ( 70.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 74 ( 71.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 74 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 --RLEKIKPYFIGSFEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDS-- 56 usage_00277.pdb 1 --RLEKIKPYFIGSFEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDGLV 58 usage_00278.pdb 1 --------------FEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDGLV 46 usage_00366.pdb 1 ------------GSFEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDG-- 46 usage_00367.pdb 1 SARLEKIKPYFIGSFEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDG-- 58 FEQLKEILQEGEKQGVFHFFSINHTIHWITSIVLFPKFKKFIDg usage_00224.pdb 57 ---DLVSRIISAL- 66 usage_00277.pdb 59 PSGDLVSRIISALT 72 usage_00278.pdb 47 P-GDLVSRIISALT 59 usage_00366.pdb 47 ---GLVSRIISAL- 56 usage_00367.pdb 59 -SSGLVSRIISALT 71 LVSRIISAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################