################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:04 2021 # Report_file: c_1327_14.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00207.pdb # 2: usage_00209.pdb # 3: usage_00210.pdb # 4: usage_00211.pdb # 5: usage_00212.pdb # 6: usage_00213.pdb # 7: usage_00305.pdb # 8: usage_00901.pdb # 9: usage_01016.pdb # 10: usage_01017.pdb # 11: usage_01018.pdb # 12: usage_01019.pdb # 13: usage_01020.pdb # # Length: 63 # Identity: 2/ 63 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 63 ( 30.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 63 ( 50.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00207.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_00209.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_00210.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRA- 53 usage_00211.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_00212.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRA- 53 usage_00213.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_00305.pdb 1 TIGNILEG------KVFKTRH-TGMAGV--INP-GTDRNW--TGHPFVQSSWYAFGRMAW 48 usage_00901.pdb 1 -GSIVAALFLSKFT---EDYEWAHLDIAGSA-GD-A--SCKA-SGRPVPLLVHYLISQAK 51 usage_01016.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRA- 53 usage_01017.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_01018.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_01019.pdb 1 -GTITAGCFLSRFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 54 usage_01020.pdb 1 -----------RFA---KAYNWAHMDIAGTAWI-SGGKDKGA-TGRPVPLLTQYLLDRAG 44 k y ahmdia a grpVpll yl A usage_00207.pdb --- usage_00209.pdb --- usage_00210.pdb --- usage_00211.pdb --- usage_00212.pdb --- usage_00213.pdb --- usage_00305.pdb 49 --D 49 usage_00901.pdb 52 ENL 54 usage_01016.pdb --- usage_01017.pdb --- usage_01018.pdb --- usage_01019.pdb --- usage_01020.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################