################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:02 2021 # Report_file: c_1459_13.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00995.pdb # 2: usage_01206.pdb # 3: usage_01313.pdb # 4: usage_01314.pdb # 5: usage_01876.pdb # 6: usage_01886.pdb # 7: usage_01887.pdb # 8: usage_01888.pdb # 9: usage_01897.pdb # 10: usage_02121.pdb # 11: usage_02145.pdb # 12: usage_02263.pdb # 13: usage_02614.pdb # 14: usage_02781.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 55 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 55 ( 50.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00995.pdb 1 RIWTVVLESYVVDM-P---S----ED-DTRMFADTVVKLNLQKLATVAEAMA--- 43 usage_01206.pdb 1 RIWTVVLESYVVDM-PEGNS----ED-DTRMFADTVVKLNLQKLATVAEAMARN- 48 usage_01313.pdb 1 RIWTVVLESYVVDM-P--------ED-DTRMFADTVVKLNLQKLATVAEAMAR-- 43 usage_01314.pdb 1 RIWTVVLESYVVDM-PEGNS----ED-DTRMFADTVVKLNLQKLATVAEAMAR-- 47 usage_01876.pdb 1 -IWTVVLESYVVDV-PEGNS----EE-DTRLFADTVIRLNLQKLASITEAMNRNN 48 usage_01886.pdb 1 RIWTVVLESYVVDM-P-----------DTRMFADTVVKLNLQKLATVAEAMAR-- 41 usage_01887.pdb 1 RIWTVVLESYVVDM-PEG-N----SEDDTRMFADTVVKLNLQKLATVAEAMAR-- 47 usage_01888.pdb 1 RIWTVVLESYVVDM-------------DTRMFADTVVKLNLQKLATVAEAMA--- 39 usage_01897.pdb 1 KVYTVVLESYTVDI-PEGNT----EE-DTKMFVDTVVKLNLQKLGVAATSA---- 45 usage_02121.pdb 1 RVYSVVLESYIVDI-PQGNT----EE-DTRMFVDTVVKSNLQNLAVISTA----- 44 usage_02145.pdb 1 ---EIHFIGIVAKEIDL---GMEL-S-----DEVKAGVQKAVEIAEKLA------ 37 usage_02263.pdb 1 -ALERWSIEEPD-A----------QG-MERMRIVRDQIDNRVQALLAG------- 35 usage_02614.pdb 1 RIWTVVLESYVVDV-PEGNS----EE-DTRLFADTVIRLNLQKLASITEAMNR-- 47 usage_02781.pdb 1 RIWTVVLESYVVDM-PEGNS----ED-DTRMFADTVVKLNLQKLATVAEAMARN- 48 n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################