################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:48:32 2021 # Report_file: c_0498_13.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00012.pdb # 8: usage_00026.pdb # 9: usage_00027.pdb # 10: usage_00033.pdb # 11: usage_00034.pdb # 12: usage_00035.pdb # 13: usage_00036.pdb # 14: usage_00048.pdb # 15: usage_00152.pdb # 16: usage_00153.pdb # 17: usage_00196.pdb # 18: usage_00197.pdb # 19: usage_00198.pdb # 20: usage_00199.pdb # 21: usage_00200.pdb # 22: usage_00201.pdb # 23: usage_00204.pdb # 24: usage_00205.pdb # 25: usage_00206.pdb # 26: usage_00207.pdb # 27: usage_00208.pdb # 28: usage_00209.pdb # # Length: 77 # Identity: 23/ 77 ( 29.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 77 ( 35.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 77 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -YEVYATLNQVAEELKVPVFNGISLSSDMYYPHKIIPTRLEDYSKANVAVVEMEVATLMV 59 usage_00006.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00007.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00008.pdb 1 DFDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 60 usage_00009.pdb 1 ---VYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 57 usage_00010.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00012.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00026.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMFYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00027.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMFYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00033.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00034.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00035.pdb 1 --DVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 58 usage_00036.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00048.pdb 1 DFDVYDTLNKCAQELNVPVFNGISVSSD-YYPNKIIPSRLEDYSKANAAVVE-ELAT-LV 57 usage_00152.pdb 1 -PHVYQALMDAAKELGIEAASGIGVTQDYFYQNGILPSKLEMYSKC-CDVIDMEMSGVLG 58 usage_00153.pdb 1 -PHVYQALMDAAKELGIEAASGIGVTQDYFYQNGILPSKLEMYSKC-CDVIDMEMSGVLG 58 usage_00196.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00197.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00198.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00199.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00200.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00201.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00204.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00205.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00206.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00207.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00208.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 usage_00209.pdb 1 -FDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMV 59 VY L A EL GI v D Y n I Ps LE YSK V E usage_00005.pdb 60 MGTLRKVKTGGIF---- 72 usage_00006.pdb 60 IGTLRKVKTGGIL---- 72 usage_00007.pdb 60 IGTLRKVKTGGIL---- 72 usage_00008.pdb 61 IGTLRKVKTGGIL---- 73 usage_00009.pdb 58 IGTLRKVKTGGIL---- 70 usage_00010.pdb 60 IGTLRKVKTGGIL---- 72 usage_00012.pdb 60 IGTLRKVKTGGIL---- 72 usage_00026.pdb 60 IGTLRKVKTGGIL---- 72 usage_00027.pdb 60 IGTLRKVKTGGIL---- 72 usage_00033.pdb 60 IGTLRKVKTGGIL---- 72 usage_00034.pdb 60 IGTLRKVKTGGIL---- 72 usage_00035.pdb 59 IGTLRKVKTGGIL---- 71 usage_00036.pdb 60 IGTLRKVKTGGIL---- 72 usage_00048.pdb 58 IGTLRKVKTGGIL---- 70 usage_00152.pdb 59 LCQARGIATCGILAV-- 73 usage_00153.pdb 59 LCQARGIATCGILAV-- 73 usage_00196.pdb 60 IGTLRKVKTGGIL---- 72 usage_00197.pdb 60 IGTLRKVKTGGILIVDG 76 usage_00198.pdb 60 IGTLRKVKTGGIL---- 72 usage_00199.pdb 60 IGTLRKVKTGGIL---- 72 usage_00200.pdb 60 IGTLRKVKTGGIL---- 72 usage_00201.pdb 60 IGTLRKVKTGGIL---- 72 usage_00204.pdb 60 IGTLRKVKTGGILIVDG 76 usage_00205.pdb 60 IGTLRKVKTGGILIVDG 76 usage_00206.pdb 60 IGTLRKVKTGGILIVDG 76 usage_00207.pdb 60 IGTLRKVKTGGILIVDG 76 usage_00208.pdb 60 IGTLRKVKTGGIL---- 72 usage_00209.pdb 60 IGTLRKVKTGGILIVDG 76 R T GIl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################