################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:56 2021 # Report_file: c_1210_41.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00193.pdb # 2: usage_00333.pdb # 3: usage_00334.pdb # 4: usage_00335.pdb # 5: usage_00336.pdb # 6: usage_00484.pdb # # Length: 24 # Identity: 0/ 24 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 24 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 24 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00193.pdb 1 -NVKTIAH-WVQASRQVMDDA--- 19 usage_00333.pdb 1 ---G-FALKAGQ-IPGFREFLKK- 18 usage_00334.pdb 1 ---G-FALKAGQ-IPGFREFLKKV 19 usage_00335.pdb 1 ---G-FALKAGQ-IPGFREFLKKV 19 usage_00336.pdb 1 ---G-FALKAGQ-IPGFREFLKKV 19 usage_00484.pdb 1 G--V-KFFQRKV-E-SFEEVAREG 19 a q f e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################