################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:12 2021 # Report_file: c_0833_9.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00275.pdb # 8: usage_00276.pdb # 9: usage_00452.pdb # 10: usage_00453.pdb # 11: usage_00454.pdb # 12: usage_00455.pdb # 13: usage_00456.pdb # 14: usage_00457.pdb # # Length: 106 # Identity: 62/106 ( 58.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/106 ( 58.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/106 ( 5.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00003.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00004.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00005.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00006.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00007.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00275.pdb 1 VRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAE 60 usage_00276.pdb 1 VRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAE 60 usage_00452.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00453.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00454.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00455.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00456.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 usage_00457.pdb 1 LQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 60 DRDWYWKA LPE DR HPACNPF P G L G F KSL V GLDL D QLAYA usage_00002.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00003.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00004.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00005.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00006.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL- 105 usage_00007.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 106 usage_00275.pdb 61 GLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAF------ 100 usage_00276.pdb 61 GLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA--- 103 usage_00452.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNA--- 103 usage_00453.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00454.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00455.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL- 105 usage_00456.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 usage_00457.pdb 61 ALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN-- 104 L G VK E ATVGFYLLPN H H VM EIS F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################