################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:55 2021 # Report_file: c_1208_49.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00022.pdb # 2: usage_00071.pdb # 3: usage_01083.pdb # 4: usage_01269.pdb # 5: usage_01270.pdb # 6: usage_02002.pdb # 7: usage_02289.pdb # 8: usage_02347.pdb # 9: usage_02348.pdb # # Length: 45 # Identity: 3/ 45 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 45 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 45 ( 28.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 VGYQPQGDKANFFRMVISN------PAATQSDIDFLIEEIERLG- 38 usage_00071.pdb 1 -GYVETA--DNTFFF--A-VHIQGEKRAAGSSAAEIALSILDKKG 39 usage_01083.pdb 1 -GYVETK--DNTYYF--A-THLKGEDNANGEKAQQISERILKEME 39 usage_01269.pdb 1 -GYVITN--HDKYYF--A-THLSD-GKPSGKNAELISEKILKEMG 38 usage_01270.pdb 1 -GYVITN--HDKYYF--A-THLSD-GKPSGKNAELISEKILKEMG 38 usage_02002.pdb 1 -GYVITN--HDKYYF--A-THLSD-GKPSGKNAELISEKILKEMG 38 usage_02289.pdb 1 -GYVETK--DNTYYF--A-THLKGEDNANGEKAQQISERILKEME 39 usage_02347.pdb 1 -GYVITN--HDKYYF--A-THLSD-GKPSGKNAELISEKILKEMG 38 usage_02348.pdb 1 -GYVITN--HDKYYF--A-THLSD-GKPSGKNAELISEKILKEMG 38 GYv t f a g a i e Il #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################