################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:41 2021 # Report_file: c_0777_166.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00393.pdb # 2: usage_00491.pdb # 3: usage_00658.pdb # 4: usage_00659.pdb # 5: usage_00660.pdb # 6: usage_00661.pdb # 7: usage_00843.pdb # 8: usage_01259.pdb # 9: usage_01468.pdb # # Length: 88 # Identity: 0/ 88 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 88 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 88 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00393.pdb 1 DMVFA-FT-ND----DSTN-FFISMNARY--M----FNVENVIAR-----------VY-- 34 usage_00491.pdb 1 --RVV--VGSG----GVDS-SVTALLLKE--QGYDV----IGIFKNWDDTDCTATE---- 41 usage_00658.pdb 1 -EKVV-LAYSG----GLDT-SVILKWLCE--KGFDV----IAYVA-----------NVGQ 36 usage_00659.pdb 1 -EKVV-LAYSG----GLDT-SVILKWLCE--KGFDV----IAYVA-----------NVGQ 36 usage_00660.pdb 1 -EKVV-LAYSG----GLDT-SVILKWLCE--KGFDV----IAYVA-----------NVGQ 36 usage_00661.pdb 1 -EKVV-LAYSG----GLDT-SVILKWLCE--KGFDV----IAYVA-----------NVGQ 36 usage_00843.pdb 1 -GSVV-LAYSG----GLDT-SCILVWLKE--QGYDV----IAYLA-----------NIGQ 36 usage_01259.pdb 1 -----RVLSLF----DG--IATGLLVLKDLGIQVDR----YIASE-----------VCE- 33 usage_01468.pdb 1 ------EGVNVGDKDFSAL-ISKMKEAG----------V-SIIYW-----------GG-- 29 usage_00393.pdb 35 ----DPEKIKIFEENG----IKTIC--P 52 usage_00491.pdb 42 ---DYKDVVAVADQIG----I-PYYSVN 61 usage_00658.pdb 37 KD-DFVAIKEKALKTG----ASKVYVED 59 usage_00659.pdb 37 KD-DFVAIKEKALKTG----ASKVYVED 59 usage_00660.pdb 37 KD-DFVAIKEKALKTG----ASKVYVED 59 usage_00661.pdb 37 KD-DFVAIKEKALKTG----ASKVYVED 59 usage_00843.pdb 37 KE-DFEEARKKALKLG----AKKVFIED 59 usage_01259.pdb 34 --DSITVGMVRHQ-------GKIMYVGD 52 usage_01468.pdb 30 ----LHTEAGLIIRQAADQGLKAKLVSG 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################