################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:17 2021 # Report_file: c_0076_15.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00007.pdb # 3: usage_00010.pdb # 4: usage_00023.pdb # 5: usage_00025.pdb # 6: usage_00027.pdb # 7: usage_00123.pdb # 8: usage_00124.pdb # 9: usage_00125.pdb # 10: usage_00126.pdb # 11: usage_00128.pdb # 12: usage_00130.pdb # 13: usage_00133.pdb # # Length: 151 # Identity: 29/151 ( 19.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/151 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/151 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 59 usage_00007.pdb 1 -ITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF 59 usage_00010.pdb 1 -ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 59 usage_00023.pdb 1 -IDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 59 usage_00025.pdb 1 -IDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 59 usage_00027.pdb 1 ---GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 57 usage_00123.pdb 1 IIQPLESLKSLSELSLSSNQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWL 60 usage_00124.pdb 1 -IAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQL 59 usage_00125.pdb 1 IIQPLESLKSLSELSLSSNQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWL 60 usage_00126.pdb 1 -IAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQL 59 usage_00128.pdb 1 --SPLASLTSLHYFTAYVNQITDITPVAN-TRLNSLKIGNNKITDLSPLANLSQLTWLEI 57 usage_00130.pdb 1 --SPLASLTSLHYFTAYVNQITDITPVAN-TRLNSLKIGNNKITDLSPLANLSQLTWLEI 57 usage_00133.pdb 1 -IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF-GNQVTDLKPLANLTTLERLDI 58 L L Nq DI p L N i D pL L L L usage_00005.pdb 60 SSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVS-DISVLAKLT 118 usage_00007.pdb 60 SSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS-DITPLGILT 118 usage_00010.pdb 60 SSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVS-DISVLAKLT 118 usage_00023.pdb 60 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN-QVT-DLKPLANLT 117 usage_00025.pdb 60 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN-QVT-DLKPLANLT 117 usage_00027.pdb 58 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN-QVT-DLKPLANLT 115 usage_00123.pdb 61 FGNKISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELSLSGNNIS-DIAPLESLK 119 usage_00124.pdb 60 SRNQISDIAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELSSNQIT-DIAPLASLK 118 usage_00125.pdb 61 FGNKISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELSLSGNNIS-DIAPLESLK 119 usage_00126.pdb 60 SRNQISDIAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELSSNQIT-DIAPLASLK 118 usage_00128.pdb 58 GTNQISDINAVKDLTKLK-LNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDEVIGGLT 116 usage_00130.pdb 58 GTNQISDINAVKDLTKLK-LNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDEVIGGLT 116 usage_00133.pdb 59 SSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLK-DIGTLASLT 117 N Di L L L N D L L L L L usage_00005.pdb 119 NLESLIATNNQISDITPLGILTNLDELSL-- 147 usage_00007.pdb 119 NLDELSLNGNQLKDIGTLASLTNLTDLDL-- 147 usage_00010.pdb 119 NLESLIATNNQISDITPLGILTNLDELSL-- 147 usage_00023.pdb 118 TLERLDISSNKVSDISVLAKLTNLESLIA-- 146 usage_00025.pdb 118 TLERLDISSNKVSDISVLAKLTNLESLIA-- 146 usage_00027.pdb 116 TLERLDISSNKVSDISVLAKLTNLESLIA-- 144 usage_00123.pdb 120 SLTELSLSSNQITDIAPLASLKSLTELSL-- 148 usage_00124.pdb 119 SLSTLWLSSNQISDIAPLASLESLSELSLS- 148 usage_00125.pdb 120 SLTELSLSSNQITDIAPLASLKSLTELSL-- 148 usage_00126.pdb 119 SLSTLWLSSNQISDIAPLASLESLSELSLSS 149 usage_00128.pdb 117 NLTTLFLSQNHITDIRPLASLSKDSAD---- 143 usage_00130.pdb 117 NLTTLFLSQNHITDIRPLASLSKDSAD---- 143 usage_00133.pdb 118 NLTDLDLANNQISNLAPLSGLTKLTELKL-- 146 L L N di L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################