################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:28 2021 # Report_file: c_1418_169.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00068.pdb # 3: usage_00087.pdb # 4: usage_00104.pdb # 5: usage_00329.pdb # 6: usage_00330.pdb # 7: usage_00343.pdb # 8: usage_00369.pdb # 9: usage_00371.pdb # 10: usage_00398.pdb # 11: usage_00400.pdb # 12: usage_00498.pdb # 13: usage_00672.pdb # 14: usage_01188.pdb # 15: usage_01189.pdb # # Length: 34 # Identity: 11/ 34 ( 32.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 34 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 34 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TYEKYLGPQYVAGITNLKKCSTSPLLEACEFLRK 34 usage_00068.pdb 1 TYEQYLGSEYVTSITNLRRCSSSPLLEACAFLRA 34 usage_00087.pdb 1 TYEKYLGEEYVKAVGNLRKCSTSSLLEACTF--- 31 usage_00104.pdb 1 TYEEYLGTEYVTAIANLKKCSTSPLLEACAFLTR 34 usage_00329.pdb 1 TYEKYLGADYIKAVSNLRKCSTSRLLEACTF--- 31 usage_00330.pdb 1 TYEKYLGADYIKAVSNLRKCSTSRLLEACTF--- 31 usage_00343.pdb 1 TYESYLGADYITAVANLRKCSTSKLLEACTF--- 31 usage_00369.pdb 1 TYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRR- 33 usage_00371.pdb 1 -YEKYLGEEYVKAVGNLRKCSTSSLLEACTFRR- 32 usage_00398.pdb 1 TYEQYLGSEYVTSITNLRRCSSSPLLEACAFLRA 34 usage_00400.pdb 1 TYDEYLGPQYVTAIAKLRRCSTSPLLEACAFLMR 34 usage_00498.pdb 1 TYEKYLGADYIKAVSNLRKCSTSRLLEACTF--- 31 usage_00672.pdb 1 TYEEYLGTEYVTAIANLKKCSTSPLLEACAF--- 31 usage_01188.pdb 1 TYKTYLGPQYLTLMDNFRQCLSSELLDACT---- 30 usage_01189.pdb 1 TYKTYLGPQYLTLMDNFRQCLSSELLDACT---- 30 Y YLG Y n C S LL AC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################