################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:04 2021 # Report_file: c_1414_56.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00234.pdb # 2: usage_00235.pdb # 3: usage_00254.pdb # 4: usage_00394.pdb # 5: usage_00617.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 63 ( 7.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 63 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 -SEDVREAMNEVAEWLENHEE-FSVEE--------FNNILFEVAKRRGI-SSREWFSTLY 49 usage_00235.pdb 1 -SEDVREAMNEVAEWLENHEE-FSVEE--------FNNILFEVAKRRGI-SSREWFSTLY 49 usage_00254.pdb 1 ------SEREKRVSNAVEFL-------LDSRVRRTPTSSKVHFLKSKGL-SAEEICEAFT 46 usage_00394.pdb 1 AERVLEEAKKAFKDL----NS-WNMEE--------IEKTLRDLSEKGLA-SKKVVFQLIR 46 usage_00617.pdb 1 ----------SISELAQPLESGTHFPL--------FLLCLQQLAKLQDREWLTELFQQSK 42 l k s e f usage_00234.pdb 50 RLF 52 usage_00235.pdb 50 RLF 52 usage_00254.pdb 47 KVG 49 usage_00394.pdb 47 GA- 48 usage_00617.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################