################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:18 2021 # Report_file: c_1402_112.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00158.pdb # 2: usage_00578.pdb # 3: usage_00579.pdb # 4: usage_00580.pdb # 5: usage_00581.pdb # 6: usage_00582.pdb # # Length: 96 # Identity: 65/ 96 ( 67.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/ 96 ( 68.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 96 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00158.pdb 1 -------------------DLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 41 usage_00578.pdb 1 CDKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 60 usage_00579.pdb 1 CDKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 60 usage_00580.pdb 1 CDKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 60 usage_00581.pdb 1 -DKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 59 usage_00582.pdb 1 CDKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI 60 DLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDI usage_00158.pdb 42 KTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILL- 76 usage_00578.pdb 61 KTLLMDSQDKYFEATQTVYEWAGVATQLLAAYILLF 96 usage_00579.pdb 61 KTLLMDSQDKYFEATQTVYEWAGVA----------- 85 usage_00580.pdb 61 KTLLMDSQDKYFEATQTVYEWAGVATQLLAAYILLF 96 usage_00581.pdb 60 KTLLMDSQDKYFEATQTVYEWAGVATQLLAAYILL- 94 usage_00582.pdb 61 KTLLMDSQDKYFEATQTVYEWAGVATQLLAAYILLF 96 KTLLMDSQDKYFEATQTVYEWaGVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################