################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:31 2021 # Report_file: c_1396_46.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00078.pdb # 2: usage_00079.pdb # 3: usage_00350.pdb # 4: usage_01254.pdb # 5: usage_01255.pdb # 6: usage_01667.pdb # 7: usage_01668.pdb # # Length: 65 # Identity: 17/ 65 ( 26.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 65 ( 33.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 65 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 -VPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRF 59 usage_00079.pdb 1 -VPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRF 59 usage_00350.pdb 1 -VPKRFEV-RKAIVEKDFATFAKET--DSNSFHATCLDSFPPIFY-NDTSKRIISWCHTI 55 usage_01254.pdb 1 -VPARMAEMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRF 59 usage_01255.pdb 1 -VPARMAEMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRF 59 usage_01667.pdb 1 TVPERMKIASRAIKARDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAY 60 usage_01668.pdb 1 TVPERMKIASRAIKARDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAY 60 VP Rm r I DF FA S C t P I Y S I lv usage_00078.pdb 60 NTHHG 64 usage_00079.pdb 60 NTHHG 64 usage_00350.pdb 56 NQFYG 60 usage_01254.pdb 60 NAHHG 64 usage_01255.pdb 60 NAHHG 64 usage_01667.pdb 61 NAKKG 65 usage_01668.pdb 61 NAKKG 65 N G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################