################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:59 2021 # Report_file: c_0565_21.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00094.pdb # 2: usage_00120.pdb # 3: usage_00122.pdb # 4: usage_00123.pdb # 5: usage_00126.pdb # 6: usage_00127.pdb # 7: usage_00128.pdb # 8: usage_00145.pdb # 9: usage_00200.pdb # 10: usage_00201.pdb # # Length: 124 # Identity: 56/124 ( 45.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/124 ( 51.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/124 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 KIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVT 60 usage_00120.pdb 1 KIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVT 60 usage_00122.pdb 1 -IVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGST-GAHEALELRDGDKSRYNGKGVL 58 usage_00123.pdb 1 -IVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSG----------LRDGDKSRYNGKGVL 49 usage_00126.pdb 1 -IVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVL 59 usage_00127.pdb 1 -IVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVL 59 usage_00128.pdb 1 -IVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVL 59 usage_00145.pdb 1 -VYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVT 59 usage_00200.pdb 1 EITAREILDSRGRPTVEAEVHLEDGSVGLAQVPSGASTGTFEAHELRDDDPSRYGGKGVQ 60 usage_00201.pdb 1 EITAREILDSRGRPTVEAEVHLEDGSVGLAQVPSGASTGTFEAHELRDDDPSRYGGKGVQ 60 i RE DSRG PT E V lE G vG A PSG LRD D SR GKGV usage_00094.pdb 61 KAVAAVNGPIAQALI--GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAA 118 usage_00120.pdb 61 KAVAAVNGPIAQALI--GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAA 118 usage_00122.pdb 59 KAVQAVNEDIAEALI--GFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAA 116 usage_00123.pdb 50 KAVQAVNEDIAEALI--GFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAA 107 usage_00126.pdb 60 KAVQAVNEDIAEALI--GFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAA 117 usage_00127.pdb 60 KAVQAVNEDIAEALI--GFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAA 117 usage_00128.pdb 60 KAVQAVNEDIAEALI--GFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAA 117 usage_00145.pdb 60 KAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIALDGTPNKGKLGANAILGVSIAVARAAA 119 usage_00200.pdb 61 KAVENV-SAIEDALI--GLSALDQEGLDKAMIALDGTPNKKNLGANAILAVSLATAHAAA 117 usage_00201.pdb 61 KAVENV-SAIEDALI--GLSALDQEGLDKAMIALDGTPNKKNLGANAILAVSLATAHAAA 117 KAV V I alI g a DQ D I LDGT NK GANAIL VSlA A AAA usage_00094.pdb 119 AAKG 122 usage_00120.pdb 119 AAKG 122 usage_00122.pdb 117 AAFG 120 usage_00123.pdb 108 AAFG 111 usage_00126.pdb 118 AAFG 121 usage_00127.pdb 118 AAFG 121 usage_00128.pdb 118 AAFG 121 usage_00145.pdb 120 DLLG 123 usage_00200.pdb 118 TSLN 121 usage_00201.pdb 118 TSLN 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################