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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:08:39 2021
# Report_file: c_1396_45.html
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#====================================
# Aligned_structures: 4
#   1: usage_00122.pdb
#   2: usage_01171.pdb
#   3: usage_01173.pdb
#   4: usage_01175.pdb
#
# Length:        168
# Identity:        6/168 (  3.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     60/168 ( 35.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          106/168 ( 63.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00122.pdb         1  RSRTKKFISAIWLAS------------------ALLAIPMLFTMGLQNRSADGTHPGGLV   42
usage_01171.pdb         1  ---------------DTATLKVVIQLNTFMSFLFPMLVASIL------------------   27
usage_01173.pdb         1  ---------------------------------FPMLVASIL------------------    9
usage_01175.pdb         1  ---------------------------------FPMLVASIL------------------    9
                                                            fpmlvasil                  

usage_00122.pdb        43  CTPIVDTATVKVVIQVN-TFMS------------FLFPMLVISILNTVIANKLTVMVPG-   88
usage_01171.pdb        28  -----NTVIARRLTVMV-------RVQALRRGVLVLRAMVIAFVVCWLPYHVRRLMF--V   73
usage_01173.pdb        10  -----NTVAARRLTVMVE----PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMF--V   58
usage_01175.pdb        10  -----NTVAARRLTVMV-HQAAPGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMF--V   61
                                nTv arrltvmv                 vLra viafvvcwlpyhvrrlMf   

usage_00122.pdb        89  -------------RVQALRHGVLVLRAVVIAFVVCWL-----------  112
usage_01171.pdb        74  YISDEQWTTALFDFYHYFYMLSNALVYVSAA------INPILYNLVSA  115
usage_01173.pdb        59  YISDEQWTTALFDFYHYFYMLSNALVYVSAA-----------------   89
usage_01175.pdb        62  YISDEQWTTALFDFYHYFYMLSNALVYVSAA-----------------   92
                                        fyhyfymlsnaLvyVsaA                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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