################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:24 2021 # Report_file: c_0989_90.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00662.pdb # 2: usage_00663.pdb # 3: usage_00797.pdb # 4: usage_00812.pdb # # Length: 73 # Identity: 4/ 73 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 73 ( 15.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 73 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00662.pdb 1 GLDPVSLGDG---------VAEVRLP-AAHLRNRGG------VHGGALFSL-DV-TGLAC 42 usage_00663.pdb 1 GLDPVSLGDG---------VAEVRLP-AAHLRNRGG------VHGGALFSL-DV-TGLAC 42 usage_00797.pdb 1 ----------GTSAEDEQGELRFELP-FL-------QPALHGGLIGGFESA-AI-HLWNR 40 usage_00812.pdb 1 GVVPEHSGNG---------TARTRLPARADLVNSRG------DIHGGTLSVLDFTLGAAI 45 a rLP a G S d g a usage_00662.pdb 43 SSSHGFDRQSVT- 54 usage_00663.pdb 43 SSSHGFDRQSVT- 54 usage_00797.pdb 41 E----SLEAPKIV 49 usage_00812.pdb 46 RGD-TPEVGVAT- 56 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################