################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:28 2021 # Report_file: c_1148_27.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00685.pdb # 2: usage_00686.pdb # 3: usage_00872.pdb # 4: usage_00875.pdb # 5: usage_00938.pdb # 6: usage_01170.pdb # 7: usage_01171.pdb # 8: usage_01188.pdb # 9: usage_01189.pdb # 10: usage_01190.pdb # 11: usage_01211.pdb # 12: usage_01240.pdb # 13: usage_01241.pdb # 14: usage_01242.pdb # 15: usage_01243.pdb # 16: usage_01244.pdb # 17: usage_01246.pdb # 18: usage_01247.pdb # 19: usage_01248.pdb # 20: usage_01249.pdb # 21: usage_02012.pdb # 22: usage_02026.pdb # 23: usage_02027.pdb # 24: usage_02693.pdb # 25: usage_02740.pdb # 26: usage_03191.pdb # 27: usage_03483.pdb # 28: usage_03643.pdb # # Length: 41 # Identity: 1/ 41 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 41 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 41 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00685.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_00686.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_00872.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_00875.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_00938.pdb 1 --K-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 36 usage_01170.pdb 1 --K-M-YATIYELK--KSYNVTSVLF-RKKKCDYWIRTFVP 34 usage_01171.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01188.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01189.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01190.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01211.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01240.pdb 1 --K-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 36 usage_01241.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01242.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01243.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01244.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01246.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01247.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01248.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_01249.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_02012.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_02026.pdb 1 --K-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 36 usage_02027.pdb 1 --K-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 36 usage_02693.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYAIATFVP 38 usage_02740.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 usage_03191.pdb 1 ---TQFRDPKVFWYEPSQKWIMTAAKSQD--YKIEIYSS-- 34 usage_03483.pdb 1 --T-M-YSTIYELQENNSYNVTSILV-R--GCRYWIRTFVP 34 usage_03643.pdb 1 PQK-M-YATIYELKEDKSYNVTSVLF-RKKKCDYWIRTFVP 38 m y tiyel synvts l r c y I tf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################