################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:15 2021 # Report_file: c_1211_131.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00065.pdb # 2: usage_00121.pdb # 3: usage_00232.pdb # 4: usage_00316.pdb # 5: usage_00437.pdb # 6: usage_00826.pdb # 7: usage_00916.pdb # 8: usage_01057.pdb # 9: usage_01116.pdb # 10: usage_01149.pdb # # Length: 33 # Identity: 9/ 33 ( 27.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 33 ( 30.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 33 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 --SWGDGCAQKNKPGVYTKVYNYV--------- 22 usage_00121.pdb 1 IVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT 33 usage_00232.pdb 1 --SWGSGCAQKNKPGVYTKVCNYV--------- 22 usage_00316.pdb 1 --SWGEGCARKGKYGIYTKVTAFL--------- 22 usage_00437.pdb 1 --SWGEGCARPGKPGVYARVGAYY--------- 22 usage_00826.pdb 1 --SWGEGCARKGKYGIYTKVTAFL--------- 22 usage_00916.pdb 1 --SWGHGCAWKNRPGVYTKVYNYV--------- 22 usage_01057.pdb 1 --SWGEGCARKGKYGIYTKVTAFL--------- 22 usage_01116.pdb 1 --SWGRGCALKDKPGVYTRVSHFL--------- 22 usage_01149.pdb 1 --SWGEGCAQPNRPGIYTRVTYYL--------- 22 SWG GCA G Yt V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################