################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:06 2021 # Report_file: c_0173_46.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00035.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00248.pdb # # Length: 123 # Identity: 13/123 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/123 ( 30.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/123 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -RVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLES 58 usage_00040.pdb 1 NHALLVGYGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRERGVRAVLGNAANEEI-QL 58 usage_00041.pdb 1 -HALLVGYGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRERGVRAVLGNAANEEI-QL 57 usage_00248.pdb 1 -QVLI-LGGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWER 58 l g GR G g Llas vvie lR G G A usage_00035.pdb 59 AG--AAKAEVLINAIDDP--QTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKP 114 usage_00040.pdb 59 AH--LECAKWLILTIPNG--YEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQV 114 usage_00041.pdb 58 AH--LECAKWLILTIPNG--YEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQV 113 usage_00248.pdb 59 I-LDTGHVKLVLLA-P--HHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAA 114 a ak lil p np IiArA y D e G usage_00035.pdb 115 ERE 117 usage_00040.pdb 115 VG- 116 usage_00041.pdb 114 VG- 115 usage_00248.pdb 115 FN- 116 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################