################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:19 2021 # Report_file: c_1222_73.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00401.pdb # 2: usage_00402.pdb # 3: usage_00403.pdb # 4: usage_00404.pdb # 5: usage_00405.pdb # 6: usage_00406.pdb # 7: usage_00407.pdb # 8: usage_00408.pdb # 9: usage_00409.pdb # 10: usage_00410.pdb # 11: usage_00411.pdb # 12: usage_01080.pdb # # Length: 31 # Identity: 23/ 31 ( 74.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 31 ( 80.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 31 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00401.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHMR--- 26 usage_00402.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHMR--- 26 usage_00403.pdb 1 EGVLEYPYPPPGYKTRFEGRETIWAHM---- 27 usage_00404.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHM---- 25 usage_00405.pdb 1 EGVLEYPYPPPGYKTRFEGRETIWAHM---- 27 usage_00406.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHM---- 25 usage_00407.pdb 1 EGVLEYPYPPPGYKTRFEGRETIWAHM---- 27 usage_00408.pdb 1 EGVLEYPYPPPGYKTRFEGRETIWAHM---- 27 usage_00409.pdb 1 EGVLEYPYPPPGYKTRFEGRETIWAHM---- 27 usage_00410.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHM---- 25 usage_00411.pdb 1 --VLEYPYPPPGYKTRFEGRETIWAHM---- 25 usage_01080.pdb 1 EGVLEYPYAPPGWKTRFEGRETIWAHMRLHP 31 VLEYPYpPPGyKTRFEGRETIWAHM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################