################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:11 2021 # Report_file: c_0644_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00004.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00052.pdb # 5: usage_00080.pdb # 6: usage_00084.pdb # 7: usage_00127.pdb # 8: usage_00170.pdb # 9: usage_00171.pdb # 10: usage_00203.pdb # 11: usage_00204.pdb # # Length: 58 # Identity: 2/ 58 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 58 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 58 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -TLYYIVKGSV--AVLIKDEEGKEMILFYLNQGDFIG--ELGLFEEGQERSAWVRA-- 51 usage_00006.pdb 1 ETLYYIVKGSV--AVLIKDEEGKEMILSYLNQGDFIG--ELGLFEEGQERSAWVRA-- 52 usage_00007.pdb 1 -TLFFIIKGSV--TILIEDDDGREMIIGYLNSGDFFG--ELGLFEQ--ERSAWVRA-- 49 usage_00052.pdb 1 AEWAYMIYGSARVTIVDE---KGRSFIDDVGEGDLWYFP----------SGLPHSIQA 45 usage_00080.pdb 1 ETLYYIVKGSV--AVLIKDEEGKEMILSYLNQGDFIG--ELGLFEEGQERSAWVRA-- 52 usage_00084.pdb 1 -TLYYIVKGSV--AVLIKHEEGKEMILSYLNQGDFIG--ELGLFEEGQERSAWVRA-- 51 usage_00127.pdb 1 -RAYRVLEGLV--RLEAVDEEGNALTLRLVRPGGFFG--EEALFGQ--ERIYFAEA-- 49 usage_00170.pdb 1 -DVYFINRGSV--EVLSAD--E-KTRYAILSEGQFFG--EMALILRAP-RTATVRA-- 47 usage_00171.pdb 1 -DVYFINRGSV--EVLSAD--E-KTRYAILSEGQFFG--EMALILRAP-RTATVRA-- 47 usage_00203.pdb 1 -TLYYIVKGSV--AVLIKDEEGKEMILSYLNQGDFIG--ELGLFEEGQERSAWVRA-- 51 usage_00204.pdb 1 -TLYYIVKGSV--AVLIKDEEGKEMILSYLNQGDFIG--ELGLFEEGQERSAWVRA-- 51 Gsv G f g r a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################