################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:38 2021 # Report_file: c_0398_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00317.pdb # 4: usage_00458.pdb # 5: usage_00543.pdb # 6: usage_00702.pdb # 7: usage_00704.pdb # 8: usage_00817.pdb # # Length: 161 # Identity: 3/161 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/161 ( 1.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/161 ( 37.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 GTEISAGWGS----NSYQNYDVSTQQQLGDKTRVTLLGDYAHTHG---G----------- 42 usage_00017.pdb 1 GTEISAGWGS----NSYQNYDVSTQQQLGDKTRVTLLGDYAHTH----G----------- 41 usage_00317.pdb 1 GTEISAGWGS----NSYQNYDVSTQQQLGDKTRVTLLGDYAHTHGDNDG----------- 45 usage_00458.pdb 1 ---YAHTHG-DNDGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRT----NYDAYYSPGSP 52 usage_00543.pdb 1 GTEISAGWGS----NSYQNYDVSTQQQLGDKTRVTLLGDYAHTHG---G----------- 42 usage_00702.pdb 1 GTEISAGWGS----NSYQNYDVSCQQQLGDKTRVTLLGDYAHTHG---G----------- 42 usage_00704.pdb 1 GTEISAGWGS----NSYQNYDVSTQQQLGDKTRVTLLGDYAHTHG---G----------- 42 usage_00817.pdb 1 ---YAHTH----DGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRT----NY--------- 40 D G usage_00016.pdb 43 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-------------------- 74 usage_00017.pdb 42 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-------------------- 73 usage_00317.pdb 46 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-----------YDAYYSPGS 86 usage_00458.pdb 53 LLDTRKLYSQSWDAGLR-YNGELIKSQLITSYSHSKDYNYDPHYGRYDSSA--------- 102 usage_00543.pdb 43 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-------------------- 74 usage_00702.pdb 43 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-------------------- 74 usage_00704.pdb 43 --FLSKTLYGALEHNFTD------AWSGFVRGYGYDNRTN-------------------- 74 usage_00817.pdb 41 --DTRKLYSQSWDAGLR-YNGELIKSQLITSYSHSKDYNYDPHYGRYDSSA--------- 88 K usage_00016.pdb 75 ---DTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNY- 111 usage_00017.pdb 74 ---DTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYN-- 109 usage_00317.pdb 87 PLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYN-- 125 usage_00458.pdb 103 ---TLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTT--- 137 usage_00543.pdb 75 ---DTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYN-- 110 usage_00702.pdb 75 ---DTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNY- 111 usage_00704.pdb 75 ----TRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNY- 110 usage_00817.pdb 89 ---TLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTT--P 124 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################