################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:44 2021 # Report_file: c_0621_16.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00036.pdb # 2: usage_00039.pdb # 3: usage_00044.pdb # 4: usage_00055.pdb # 5: usage_00077.pdb # 6: usage_00115.pdb # 7: usage_00140.pdb # 8: usage_00142.pdb # 9: usage_00234.pdb # # Length: 97 # Identity: 4/ 97 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 97 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 97 ( 50.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 ------DILRQAFRTFD-PEGTGYIPKAALQDALLNLG----------DRL----KPHEF 39 usage_00039.pdb 1 -----EEEIREAFRVFD-KDGNGYISAAELRHVMTNLG----------EKL----TDEEV 40 usage_00044.pdb 1 ----SEEEIREAFRVFD-KDGNGYISAAELRHVMTNLG----------EKL----TDEEV 41 usage_00055.pdb 1 --------IREAFRVFD-KDGNGYISAAELRHVMTNLG----------EKL----TDEEV 37 usage_00077.pdb 1 ----CGKEFNKAFELYD-QDGNGYIDENELDALLKDLC-----EKNKQ-EL----DINNI 45 usage_00115.pdb 1 KVEQKLRWYFKLYD--VD-GN-GCIDRDELLTIIRAIRAINPC-----SDSTMT-AEEFT 50 usage_00140.pdb 1 -----KDEIKTAINVLD-KDKKGFIPAIELRRILSTIGD---------------NEQKEI 39 usage_00142.pdb 1 ----SEQELLEAFKVFD-KNGDGLISAAELKHVLTSIG----------EKL----TDAEV 41 usage_00234.pdb 1 ----SEEELSDLFRMFD-KNADGYIDLDELKIMLQATG----------ETI----TEDDI 41 d G I eL usage_00036.pdb 40 AEFLGIT----ET-EKGQI---RYDNFINTMF----T 64 usage_00039.pdb 41 DEMIREA----DIDGDGQV---NYEEFVQMMT----A 66 usage_00044.pdb 42 DEMIREAN---I-DGDGQV---NYEEFVQ-------- 63 usage_00055.pdb 38 DEMIREA----DIDGDGQV---NYEEFVQMMT----- 62 usage_00077.pdb 46 STYKKNI-MALS--DGGKL---YRTDLALIL------ 70 usage_00115.pdb 51 DTVFSKI----DVNGDGELSLEEFMEGVQK------- 76 usage_00140.pdb 40 TDLFTFG----I-DEQGVV---KVDDFINQDNHHHHH 68 usage_00142.pdb 42 DDMLREV----SD-GSGEI---NIQQFAALLS----- 65 usage_00234.pdb 42 EELMKDG-DK--N-NDGRI----DYDEWLEFM----- 65 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################