################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:40 2021 # Report_file: c_0736_15.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00241.pdb # 2: usage_00472.pdb # 3: usage_00534.pdb # 4: usage_00686.pdb # 5: usage_00687.pdb # # Length: 87 # Identity: 15/ 87 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 87 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 87 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00241.pdb 1 GNWG---EQ----KKAMSS-RAGVSQVLNRYTYSSTLSHLRRTNTP--I-----AKPRQL 45 usage_00472.pdb 1 --T---GNW----VG---G-RTGVSQLLDRTNWLSMLSHLRRVISS-LARGQPNFEARDL 46 usage_00534.pdb 1 ----GNLVSQSGLDL---QQVSGYTVVAEKINFYRFISHFRMVHRGSFFAQLKTTTVRKL 53 usage_00686.pdb 1 --T---GNW----VG---G-RTGVSQLLDRTNWLSMLSHLRRVISS-LARGQPNFEARDL 46 usage_00687.pdb 1 --T---GNW----VG---G-RTGVSQLLDRTNWLSMLSHLRRVISS-LARGQPNFEARDL 46 r Gvsq l r n s lSHlRrv R L usage_00241.pdb 46 HNTHWGLVCPAETPEGQACGLVKNL-- 70 usage_00472.pdb 47 HGTQWGRMCPFETPEGPNSGLVKNLAL 73 usage_00534.pdb 54 LPESWGFLCPVHTPDGSPCGLLNHFAH 80 usage_00686.pdb 47 HGTQWGRMCPFETPEGPNSGLVKNLAL 73 usage_00687.pdb 47 HGTQWGRMCPFETPEGPNSGLVKNLAL 73 h t WG CP eTPeG GLvknl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################