################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:31:34 2021 # Report_file: c_0375_8.html ################################################################################################ #==================================== # Aligned_structures: 47 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00015.pdb # 4: usage_00023.pdb # 5: usage_00025.pdb # 6: usage_00026.pdb # 7: usage_00030.pdb # 8: usage_00053.pdb # 9: usage_00055.pdb # 10: usage_00059.pdb # 11: usage_00060.pdb # 12: usage_00061.pdb # 13: usage_00072.pdb # 14: usage_00073.pdb # 15: usage_00081.pdb # 16: usage_00084.pdb # 17: usage_00087.pdb # 18: usage_00089.pdb # 19: usage_00090.pdb # 20: usage_00095.pdb # 21: usage_00101.pdb # 22: usage_00103.pdb # 23: usage_00104.pdb # 24: usage_00108.pdb # 25: usage_00110.pdb # 26: usage_00111.pdb # 27: usage_00112.pdb # 28: usage_00117.pdb # 29: usage_00122.pdb # 30: usage_00140.pdb # 31: usage_00145.pdb # 32: usage_00156.pdb # 33: usage_00157.pdb # 34: usage_00159.pdb # 35: usage_00169.pdb # 36: usage_00170.pdb # 37: usage_00171.pdb # 38: usage_00172.pdb # 39: usage_00178.pdb # 40: usage_00182.pdb # 41: usage_00183.pdb # 42: usage_00185.pdb # 43: usage_00187.pdb # 44: usage_00188.pdb # 45: usage_00198.pdb # 46: usage_00199.pdb # 47: usage_00201.pdb # # Length: 143 # Identity: 51/143 ( 35.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/143 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/143 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00004.pdb 1 TAEEKSLVSGLWAKVNVDEVGGEALGRLLIVYPWTQRFFDSFGDLSTPDSVMSNAKVKAH 60 usage_00015.pdb 1 SAEEKQLISGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 60 usage_00023.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00025.pdb 1 TAEEKGLVNGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSADAIMSNAKVKAH 60 usage_00026.pdb 1 TAEEKGLVNGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSADAIMSNAKVKAH 60 usage_00030.pdb 1 SGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAH 60 usage_00053.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00055.pdb 1 TPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPKVKAH 60 usage_00059.pdb 1 -PEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 59 usage_00060.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00061.pdb 1 TPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00072.pdb 1 ---EKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 57 usage_00073.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00081.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00084.pdb 1 TEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAH 60 usage_00087.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00089.pdb 1 -PEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 59 usage_00090.pdb 1 -PEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 59 usage_00095.pdb 1 SGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAH 60 usage_00101.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00103.pdb 1 -AEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAH 59 usage_00104.pdb 1 SAEEKQLITGLWGKVNVAECGAEALARLLIVYPWTQRFFTSFGNLSSASAVLGNPNVRAH 60 usage_00108.pdb 1 SGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAH 60 usage_00110.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVFPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00111.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00112.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00117.pdb 1 TAAEKSAILDLWGKVNVGEIGAEALGRLLVVYPWTQRFFEKFGDLSSASAIMSNAHVKSH 60 usage_00122.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPATQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00140.pdb 1 SGEEKSAVTALWGKVNVEEVGGETLGRLLVVYPWTQRFFESFGDLSTASAVMGNPKVKAH 60 usage_00145.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00156.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAW 60 usage_00157.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00159.pdb 1 TAEEKGLVNGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSADAIMSNAKVKAH 60 usage_00169.pdb 1 SAEEKEAVLGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSNADAVMGNPKVKAH 60 usage_00170.pdb 1 SAEEKEAVLGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSNADAVMGNPKVKAH 60 usage_00171.pdb 1 SAEEKEAVLGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSNADAVMGNPKVKAH 60 usage_00172.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAL 60 usage_00178.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00182.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00183.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00185.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSNADAVMNNPKVKAH 60 usage_00187.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00188.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPRTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00198.pdb 1 TPEEKSAVTALWGKVNVDEVGGKALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAH 60 usage_00199.pdb 1 TQEERQFIVNLWGRVDVEQIGAEALARLLIVYPWTQRFFSSFGNLSSPSAILHNAKVHAH 60 usage_00201.pdb 1 TAEEKSLVSGLWGKVNVDEVGGEALGRLLIVYPWTQRFFDSFGDLSTPDAVMSNAKVKAH 60 ek lW kV G e L RLL VyP TQRFF FG LS a N V a usage_00002.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00004.pdb 61 GKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFT 120 usage_00015.pdb 61 GKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFTKEFT 120 usage_00023.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00025.pdb 61 GKKVLNSFSDGLKNIDDLKGAFAKLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGHDFN 120 usage_00026.pdb 61 GKKVLNSFSDGLKNIDDLKGAFAKLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGHDFN 120 usage_00030.pdb 61 GKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLALVVARHFGKDFT 120 usage_00053.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00055.pdb 61 GKKVLGAFSDGLAHLDNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARNFGKEFT 120 usage_00059.pdb 60 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 119 usage_00060.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00061.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00072.pdb 58 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 117 usage_00073.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00081.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00084.pdb 61 GKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFT 120 usage_00087.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00089.pdb 60 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 119 usage_00090.pdb 60 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 119 usage_00095.pdb 61 GKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFT 120 usage_00101.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00103.pdb 60 GKKVLTSFGDAVKNLDNIKNTFSQLSELHCDKLHVDPENFRLLGDILIIVLAAHFSKDFT 119 usage_00104.pdb 61 GKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAGHFGKDFT 120 usage_00108.pdb 61 GKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFT 120 usage_00110.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00111.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKAHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00112.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVAPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00117.pdb 61 GAKVLASFSEGLKHLQDLKGTFAKLSELHCDKLHVDPENFRLLGNMLTIAIAHHHPSEFT 120 usage_00122.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00140.pdb 61 GKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFT 120 usage_00145.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00156.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00157.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00159.pdb 61 GKKVLNSFSDGLKNIDDLKGAFAKLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGHDFN 120 usage_00169.pdb 61 GKKVLQSFSDGLKHLDNLKGTFAKLSELHCDQLHVDPENFRLLGNVIVVVLARRLGHDFN 120 usage_00170.pdb 61 GKKVLQSFSDGLKHLDNLKGTFAKLSELHCDQLHVDPENFRLLGNVIVVVLARRLGHDFN 120 usage_00171.pdb 61 GKKVLQSFSDGLKHLDNLKGTFAKLSELHCDQLHVDPENFRLLGNVIVVVLARRLGHDFN 120 usage_00172.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00178.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00182.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00183.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00185.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHHGNEFT 120 usage_00187.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00188.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00198.pdb 61 GKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFT 120 usage_00199.pdb 61 GKKVLTSFGEAVKNLDQIKQTFAQLSELHSDKLHVDPENFKLLGNILIIVLAAHFGKDFT 120 usage_00201.pdb 61 GKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFT 120 GkKVL f d K F LSELHcD lHVdPENF LLG v a F usage_00002.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00004.pdb 121 PQVQAAYQKVVAGVANALAH--- 140 usage_00015.pdb 121 PECQAAWQKLVRVVAHALAR--- 140 usage_00023.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00025.pdb 121 PQVQAAFQKVVAGVANALA---- 139 usage_00026.pdb 121 PQVQAAFQKVVAGVANALAH--- 140 usage_00030.pdb 121 PELQASYQKVVAGVANAL----- 138 usage_00053.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00055.pdb 121 PQMQAAYQKVVAGVANALA---- 139 usage_00059.pdb 120 PPVQAAYQKVVAGVANALA---- 138 usage_00060.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00061.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00072.pdb 118 PPVQAAYQKVVAGVANALAH--- 137 usage_00073.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00081.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00084.pdb 121 PEVQASWQKMVTGVASALSS--- 140 usage_00087.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00089.pdb 120 PPVQAAYQKVVAGVANALAH--- 139 usage_00090.pdb 120 PPVQAAYQKVVAGVANALAH--- 139 usage_00095.pdb 121 PELQASYQKVVAGVANALAH--- 140 usage_00101.pdb 121 PPVQAAYQKVVAGVANALAHKYH 143 usage_00103.pdb 120 PECQAAWQKLVRVVAHALA---- 138 usage_00104.pdb 121 PDCQAAWQKLVRAVAHALAR--- 140 usage_00108.pdb 121 PELQASYQKVVAGVANALAH--- 140 usage_00110.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00111.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00112.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00117.pdb 121 PCTQAAFQKVTAGVANALAH--- 140 usage_00122.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00140.pdb 121 PQVQAAYQKVVAGVANALAH--- 140 usage_00145.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00156.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00157.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00159.pdb 121 PQVQAAFQKVVAGVANALA---- 139 usage_00169.pdb 121 PNVQAAFQKVVAGVANALAH--- 140 usage_00170.pdb 121 PNVQAAFQKVVAGVANALAH--- 140 usage_00171.pdb 121 PNVQAAFQKVVAGVANALAH--- 140 usage_00172.pdb 121 PPVQAAYQKVVAGVANALAHKYH 143 usage_00178.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00182.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00183.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00185.pdb 121 PVLQADFQKVVAGVANALAH--- 140 usage_00187.pdb 121 PPVQAAYQKVVAGVANALAH--- 140 usage_00188.pdb 121 PPVQAAYQKVVAGVANALA---- 139 usage_00198.pdb 121 PPVQAAYQKVVAGVANALAHKYH 143 usage_00199.pdb 121 PASQAAWQKLVSAVAHALA---- 139 usage_00201.pdb 121 PQVQAAYQKVVAGVANALAH--- 140 P QA QK v VA AL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################