################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:24 2021 # Report_file: c_1184_51.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00079.pdb # 2: usage_00196.pdb # 3: usage_00272.pdb # 4: usage_00309.pdb # 5: usage_00510.pdb # 6: usage_00982.pdb # 7: usage_01002.pdb # 8: usage_01106.pdb # 9: usage_01335.pdb # 10: usage_01336.pdb # 11: usage_01353.pdb # 12: usage_01358.pdb # 13: usage_01359.pdb # 14: usage_01520.pdb # 15: usage_02379.pdb # 16: usage_02380.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 36 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 36 ( 52.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 RRVHPQVTVYPA--KTQPLQ--HHNLLVCSVSG--- 29 usage_00196.pdb 1 RRVQPKVTVYPS--KTQPLQ--HHNLLVCSVSG--- 29 usage_00272.pdb 1 RRVHPQVTVYPA--KTQPLQ--HHNLLVCSVSG--- 29 usage_00309.pdb 1 RRVYPEVTVYPA-------------LLVCSVNGFYP 23 usage_00510.pdb 1 RRVYPEVTVYPA------------NLLVCSVNG--- 21 usage_00982.pdb 1 RRVYPEVTVYPA--KTQPLQ--HHNLLVCSVNG--- 29 usage_01002.pdb 1 RRVQPKVNVSPS--KKGPLQ--HHNLLVCHVTD--- 29 usage_01106.pdb 1 ---EDAVSIHPS-FLQRN-S-ENHHFYGVFDGH-G- 28 usage_01335.pdb 1 RRVEPKVTVYPS--KTQPLQ--HHNLLVCSVSG--- 29 usage_01336.pdb 1 RRVEPKVTVYPSL------Q--HHNLLVCSVSG--- 25 usage_01353.pdb 1 RRVEPKVTVYPS--------H--HNLLVCSVSG--- 23 usage_01358.pdb 1 RRVQPRVNVSPS--KKGPLQ--HHNLLVCHVTD--- 29 usage_01359.pdb 1 RRVQPRVNVSPS--KKGPLQ--HHNLLVCHVTD--- 29 usage_01520.pdb 1 KQEKPVAWLSSV--P--SSAH-GHRQLVCHVSG--- 28 usage_02379.pdb 1 RRVEPKVTVYPS--KTQPLQ--HHNLLVCSVSG--- 29 usage_02380.pdb 1 RRVEPKVTVYPS--KTQPLQ--HHNLLVCSVSG--- 29 p v p lvc v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################