################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:28 2021 # Report_file: c_1493_105.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00202.pdb # 4: usage_00677.pdb # 5: usage_00821.pdb # 6: usage_01289.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 47 ( 4.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 47 ( 63.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 ---VLHSFQKQ-NVTI---M--DHHTASESFMKHMQNEY-------- 30 usage_00034.pdb 1 NVAVLHSFQKQ-NVTI---M--DHHTASESFMKHMQNE--------- 32 usage_00202.pdb 1 -VAVLHSFQKQ-NVTI---M--DHHTASESFMKHMQN---------- 30 usage_00677.pdb 1 SR-QLIEFLHSLGKDTSEMI--SRYDVSDTIAKYISK---------- 34 usage_00821.pdb 1 ----AT--------------QFVHHALKDSILKIMES---------- 19 usage_01289.pdb 1 IK-ELS--------------TKLDSILTLVSTHVEEQ--VTPESLES 30 l k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################