################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:38 2021 # Report_file: c_0994_128.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00016.pdb # 2: usage_00903.pdb # 3: usage_00944.pdb # 4: usage_01052.pdb # 5: usage_01053.pdb # # Length: 56 # Identity: 1/ 56 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 56 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 56 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -PVEVTY-KNMRFLITHNP------TNA--TLNKFIEELKKYG----VTTIVR--- 39 usage_00903.pdb 1 K--IYTI-G--APRYR-VDVVGTNPKEASEALNQIISNLIKIGKEENVDI------ 44 usage_00944.pdb 1 -MVLQNV-DGKTDITF-TC------SRD--VGPAAVEKLDSLRNEIGFSQLLYDDH 45 usage_01052.pdb 1 DMIIQGVPPSRQQMAF-TV------KKD--FAQEALEALEPVLAEIGGEAILRP-D 46 usage_01053.pdb 1 D-MIIQG-V--QQMAF-TV------KKD--FAQEALEALEPVLAEIGGEAILRP-- 41 e L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################