################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:13 2021 # Report_file: c_1153_125.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00028.pdb # 2: usage_00212.pdb # 3: usage_00345.pdb # 4: usage_01069.pdb # 5: usage_01075.pdb # 6: usage_01356.pdb # 7: usage_01372.pdb # 8: usage_01373.pdb # 9: usage_01446.pdb # 10: usage_01874.pdb # 11: usage_01875.pdb # 12: usage_02098.pdb # 13: usage_02237.pdb # 14: usage_02278.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 35 ( 48.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 35 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --GYIVKTGLKYGADFRLYERGA--NI-DKEHSVY 30 usage_00212.pdb 1 QGDLQLFSM--EGFGTDAVIY-LKALSTDSVERLP 32 usage_00345.pdb 1 QGDLKLYSL--EGYGTDAVIY-IKALSTDSIERLP 32 usage_01069.pdb 1 QGDLQLFSM--EGFGTDAVIY-LKALSTDSVERLP 32 usage_01075.pdb 1 QGDLQLFSM--EGFGTDAVIY-LKALSTDSVERLP 32 usage_01356.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 usage_01372.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 usage_01373.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 usage_01446.pdb 1 QGDLKLYSM--EGVGTDAVIY-LKALSSESFERLP 32 usage_01874.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 usage_01875.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 usage_02098.pdb 1 QGDLQLFSM--EGFGTDAVIY-LKALSTDSVERLP 32 usage_02237.pdb 1 QGDLQLFSM--EGFGTDAVIY-LKALSTDSVERLP 32 usage_02278.pdb 1 QGDLNLYSL--SGYGTDAIIY-LKALSSESIEKLP 32 dl l s G gtda iy ls s e lp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################