################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:50 2021 # Report_file: c_1108_41.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00224.pdb # 2: usage_00249.pdb # 3: usage_00339.pdb # 4: usage_00340.pdb # 5: usage_00341.pdb # 6: usage_00434.pdb # # Length: 63 # Identity: 26/ 63 ( 41.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 63 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 63 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 ---LVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDAVLA 57 usage_00249.pdb 1 -LNNDLLVGARLLERAATGVPR-ELREALLEAAAALRA-PGDPFTRAGAALSAEVSDLLA 57 usage_00339.pdb 1 DTDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDAVLA 60 usage_00340.pdb 1 -TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDAVLA 59 usage_00341.pdb 1 -TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDAVLA 59 usage_00434.pdb 1 --NNDLLVGARLLERAATGVPR-ELREALLEAAAALRA-PGDPFTRAGAALSAEVSDLLA 56 L GARL ERAA VP E R LL A ALR R AAL V LA usage_00224.pdb 58 RH- 59 usage_00249.pdb 58 EY- 59 usage_00339.pdb 61 RHP 63 usage_00340.pdb 60 RHP 62 usage_00341.pdb 60 RHP 62 usage_00434.pdb 57 EY- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################