################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:53 2021 # Report_file: c_0664_105.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00045.pdb # 6: usage_00046.pdb # 7: usage_00188.pdb # # Length: 76 # Identity: 13/ 76 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 76 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 76 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ---IGLFISHIEDDGFLRVIPIGGVLERTLLYQRVVVRTRDGRLYRGVIGLKPPHV--IE 55 usage_00029.pdb 1 ----GLFISHIEDDGFLRVIPIGGVLERTLLYQRVVVRTRDGRLYRGVIGLKPPHV---- 52 usage_00038.pdb 1 ----GVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEK-GERYGVVGV--------- 46 usage_00039.pdb 1 MDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEK-GERYGVVGV--------- 50 usage_00045.pdb 1 MDKIGLMVNHIDKDGYLRVVPIGGVLPETLIAQKIRFFTEK-GERYGVVGVLPPHLR--- 56 usage_00046.pdb 1 ----GLMVNHIDKDGYLRVVPIGGVLPETLIAQKIRFFTEK-GERYGVVGVLPPHLRR-- 53 usage_00188.pdb 1 ---VGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVK-----NLKGVIGYR-P------ 45 G hI DG l PiGGVl tL q GV G usage_00028.pdb 56 -AQKVPELRELFIDVG 70 usage_00029.pdb 53 IAQKVPELRELFIDVG 68 usage_00038.pdb 47 ------DWDQIVVDVG 56 usage_00039.pdb 51 ------DWDQIVVDVG 60 usage_00045.pdb 57 -----IDWDSIIVDVG 67 usage_00046.pdb 54 -----IDWDSIIVDVG 64 usage_00188.pdb 46 -----PRFENLRIDF- 55 Dv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################