################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:35 2021 # Report_file: c_1026_37.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00153.pdb # 2: usage_00179.pdb # 3: usage_00222.pdb # 4: usage_00223.pdb # 5: usage_00232.pdb # # Length: 42 # Identity: 7/ 42 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 42 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 42 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00153.pdb 1 PLRSCVVYGGAD-THSQIREVQMGCHLLVATPGRLVDFIEKN 41 usage_00179.pdb 1 -VKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNK 41 usage_00222.pdb 1 -ISCMVTTGGTNLRDDILRLN-ETVHILVGTPGRVLDLASRK 40 usage_00223.pdb 1 --SCMVTTGGTNLRDDILRLN-ETVHILVGTPGRVLDLASRK 39 usage_00232.pdb 1 --KVVAVYGGTGYGKQKEALL-RGADAVVATPGRALDYLRQG 39 v GG l h V TPGR ld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################