################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:41 2021 # Report_file: c_0020_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00008.pdb # 2: usage_00070.pdb # 3: usage_00071.pdb # 4: usage_00072.pdb # 5: usage_00073.pdb # # Length: 221 # Identity: 62/221 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 197/221 ( 89.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/221 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -LDFEV-VNNVGWIR-NRAAKHNPFDAELRADL-TVLERVRDDADIRVLVLTSHPGSFCA 56 usage_00070.pdb 1 NISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKA-- 58 usage_00071.pdb 1 -ISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKA-- 57 usage_00072.pdb 1 NISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKA-- 58 usage_00073.pdb 1 -ISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKA-- 57 isvdy tphVvkIs NRerqaNslslaLleeL niLtqineeAntRVviLTgageka usage_00008.pdb 57 NLHV-----LRDNLDSGPAYWQQRIKTGLRFIHDLNLGRPVIAAVDGPAFGAGFALSLTA 111 usage_00070.pdb 59 ----FCAGADLKERAGNEEQVRHAVS-I-RTTEVEQLPQPVIAAINGIALGGGTELSLAC 112 usage_00071.pdb 58 ----FCAGADLKERAGNEEQVRHAVS-I-RTTEVEQLPQPVIAAINGIALGGGTELSLAC 111 usage_00072.pdb 59 ----FCAGADLKERAGNEEQVRHAVS-I-RTTEVEQLPQPVIAAINGIALGGGTELSLAC 112 usage_00073.pdb 58 ----FCAGADLKERAGNEEQVRHAVS-I-RTTEVEQLPQPVIAAINGIALGGGTELSLAC 111 dlkeragneeqvrhavs i RtteveqLpqPVIAAinGiAlGgGteLSLac usage_00008.pdb 112 DIVLASPRARFS-AYLRLGLVPDLGALYLLPRAVGLQRAKEL-FSTRELDAEEAHRLGLV 169 usage_00070.pdb 113 DFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLV 172 usage_00071.pdb 112 DFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLV 171 usage_00072.pdb 113 DFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLV 172 usage_00073.pdb 112 DFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLV 171 DfriAaesAslg tettLaiiPgaGgtqrLPRliGvgRAKEL ytgRrisAqEAkeyGLV usage_00008.pdb 170 -EVHESEALEQRAREIAESLVQAAPTALALTKAALNV---- 205 usage_00070.pdb 173 EFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQV 213 usage_00071.pdb 172 EFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQV 212 usage_00072.pdb 173 EFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQV 213 usage_00073.pdb 172 EFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQV 212 fVvpvhlLEekAiEIAEkiasngPiAvrLaKeAisn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################