################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:10 2021 # Report_file: c_1247_77.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00004.pdb # 2: usage_00136.pdb # 3: usage_00137.pdb # 4: usage_00207.pdb # 5: usage_00212.pdb # 6: usage_00213.pdb # 7: usage_00214.pdb # 8: usage_00239.pdb # 9: usage_00240.pdb # 10: usage_00314.pdb # 11: usage_00386.pdb # 12: usage_00415.pdb # 13: usage_00616.pdb # 14: usage_00648.pdb # 15: usage_00875.pdb # 16: usage_00887.pdb # 17: usage_00888.pdb # 18: usage_00889.pdb # 19: usage_00987.pdb # 20: usage_00988.pdb # # Length: 29 # Identity: 13/ 29 ( 44.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 29 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 29 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00136.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00137.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00207.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00212.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00213.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00214.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00239.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00240.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00314.pdb 1 ---TGHVELPQDEAQIAAWLAVNGPVAVA 26 usage_00386.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00415.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00616.pdb 1 ----DSVELSQNEQKLAAWLAKRGPISVA 25 usage_00648.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00875.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00887.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00888.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAV- 24 usage_00889.pdb 1 ATITGHVELPQDEAQIAAWLAVNGPVAVA 29 usage_00987.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 usage_00988.pdb 1 ----GHVELPQDEAQIAAWLAVNGPVAVA 25 ghVELpQdEaqiAAWLAvnGPvaV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################