################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:18 2021 # Report_file: c_1077_36.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00090.pdb # 2: usage_00093.pdb # 3: usage_00121.pdb # 4: usage_00148.pdb # 5: usage_00149.pdb # 6: usage_00150.pdb # 7: usage_00206.pdb # 8: usage_00217.pdb # 9: usage_00218.pdb # 10: usage_00219.pdb # 11: usage_00220.pdb # 12: usage_00300.pdb # 13: usage_00349.pdb # 14: usage_00443.pdb # 15: usage_00505.pdb # 16: usage_00514.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 65 ( 10.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 65 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 SHGHKQLMCLARSVLSKAKILLLDEPS--AHLDPVTY----QIIRRTLKQAFA--DCT-V 51 usage_00093.pdb 1 -GGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 50 usage_00121.pdb 1 --GQKQRVAIARALASNPKVLLCDQAT--SALDPATT----RSILELLKDINRRLGLT-I 51 usage_00148.pdb 1 -GGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 50 usage_00149.pdb 1 ---QKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 48 usage_00150.pdb 1 -GGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 50 usage_00206.pdb 1 SGGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 51 usage_00217.pdb 1 SGGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 51 usage_00218.pdb 1 --GQKQRIAIARALVRQPHILLLDEAT--SALDTESE----KVVQEALDKARE--GRT-C 49 usage_00219.pdb 1 SGGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 51 usage_00220.pdb 1 -GGQKQRIAIARALVRQPHILLLDEAT--SALDTESE----KVVQEALDKARE--GRT-C 50 usage_00300.pdb 1 -GGQRQRLAIARAFLRNPKILMLDE--ATASLDSESE----SMVQKALDSLMK--GRT-T 50 usage_00349.pdb 1 -GGQKQRIAIARALVRNPKILLLDEAT--SALDTESE----AVVQAALDKARE--GRT-T 50 usage_00443.pdb 1 -GHASLIRTIIGGAQI-IDLMMLVI------------DVTMQTQSAECLVIGQ--IACQK 44 usage_00505.pdb 1 --GQKQRIAIARALVRQPHILLLDEAT--SALDTESE----KVVQEALDKARE--GRT-C 49 usage_00514.pdb 1 SGGEKQRVAIARTLVKNPPILLFDEAT--SALDTRTE----QDILSTRAVASH---RT-T 50 q iar l d t usage_00090.pdb 52 ILCE- 55 usage_00093.pdb 51 IVIA- 54 usage_00121.pdb 52 LLIT- 55 usage_00148.pdb 51 IVIA- 54 usage_00149.pdb 49 IVIA- 52 usage_00150.pdb 51 IVIA- 54 usage_00206.pdb 52 IVIA- 55 usage_00217.pdb 52 IVIAH 56 usage_00218.pdb 50 IVIA- 53 usage_00219.pdb 52 IVIAH 56 usage_00220.pdb 51 IVIA- 54 usage_00300.pdb 51 LVI-- 53 usage_00349.pdb 51 IVIA- 54 usage_00443.pdb 45 LVVVL 49 usage_00505.pdb 50 IVIA- 53 usage_00514.pdb 51 ISI-- 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################