################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:13 2021 # Report_file: c_0752_17.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00009.pdb # 2: usage_00087.pdb # 3: usage_00091.pdb # 4: usage_00158.pdb # 5: usage_00159.pdb # 6: usage_00160.pdb # 7: usage_00180.pdb # 8: usage_00207.pdb # 9: usage_00264.pdb # 10: usage_00303.pdb # 11: usage_00304.pdb # 12: usage_00305.pdb # # Length: 59 # Identity: 1/ 59 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 59 ( 10.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -NLAMGVNLTSMSKILKC-AGNEDIITLRAEDNA-DTLALVFEAPNQEKVSDYEMK--- 53 usage_00087.pdb 1 -PVTLGMDLTSLSKILRC-GNNTDTLTLIADNTP-DSIILLFEDTKKDRIAEYSLK--- 53 usage_00091.pdb 1 --MRINVQLKNFYQTLLNCAVTKLPCTLRIVTEH--DTLLYVASRNGLFAVENFLT--- 52 usage_00158.pdb 1 --LSMGMNLGNMSKMLKC-AGNDDIITIKADDGG-DTVTFMFESPTQDKIADFEMK--- 52 usage_00159.pdb 1 --LSMGMNLGNMSKMLKC-AGNDDIITIKADDGS-DTVTFMFESPTQDKIADFEMK--- 52 usage_00160.pdb 1 --LSMGMNLGNMSKMLKC-AGNDDIITIKADDGS-DTVTFMFESPTQDKIADFEMKLMD 55 usage_00180.pdb 1 --LAMGVNLTSMSKILKC-AGNEDIITLRAEDNA-DTLALVFEAPNQEKVSDYEMKLMD 55 usage_00207.pdb 1 -NLAMGVNLTSMSKILKC-AGNEDIITLRAEDNA-DTLALVFEAPNQEKVSDYEMK--- 53 usage_00264.pdb 1 DEFKFGFNTQYL-KILKV-AKRKEAIEIASE--SPDSVIINIIG---STNREFN----- 47 usage_00303.pdb 1 RNLIMGMNLTSMSKILKC-AANDDIITMKAQDNA-DTVTFMFESPNQEKVSDYE----- 52 usage_00304.pdb 1 RNLIMGMNLTSMSKILKC-AANDDIITMKAQDNA-DTVTFMFESPNQEKVSDYE----- 52 usage_00305.pdb 1 RNLIMGMNLTSMSKILKC-AANDDIITMKAQDNA-DTVTFMFESPNQEKVSDYE----- 52 g l k L a t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################