################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:03 2021 # Report_file: c_0778_94.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00180.pdb # 3: usage_00201.pdb # 4: usage_00202.pdb # 5: usage_00257.pdb # 6: usage_00261.pdb # 7: usage_00365.pdb # 8: usage_00395.pdb # 9: usage_00664.pdb # 10: usage_00708.pdb # 11: usage_00810.pdb # # Length: 95 # Identity: 1/ 95 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 95 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 95 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QGVLLVYDITNY-QSFENLEDWYTVVK---KVSEESET-----QPLVALVGNK--IDL-E 48 usage_00180.pdb 1 MGFLLMFDLTSQ-QSFLNVRNWMSQLQANA------YC--E--NPDIVLIGNK--ADL-P 46 usage_00201.pdb 1 MGIMLVYDITNE-KSFDNIRNWIRNIE---EHA---SA-----DVEKMILGNK--VN--- 43 usage_00202.pdb 1 MGIMLVYDITNE-KSFDNIRNWIRNIE---EHA---SA-----DVEKMILGNK--DV--- 43 usage_00257.pdb 1 HGIIVVYDVTDQ-ESFNNVKQWLQEID---RYA---SE-----NVNKLLVGIKCDLT--- 45 usage_00261.pdb 1 -GFL-LFDLTSQ-QSFLNVRNW-------------------S-NPDIVLIGNK--ADL-P 34 usage_00365.pdb 1 --CVLVYDVTNA-SSFENIKSWRDEFL---VHA---NVNSP-ETFPFVILGNK--IDAEE 48 usage_00395.pdb 1 -LYLAVYDLSKGQAEVD-AKPWLFNIK---A-R---AS-----SSPVILVGTH--LDV-S 43 usage_00664.pdb 1 -AFLIVFSVTDR-RSFSKVPETLLRLR---AGRP--HH-----DLPVILVGNK--SDL-A 45 usage_00708.pdb 1 VGALIVYDISKS-SSYENCNHWLTELR---ENA---DD-----NVAVGLIGNK--SDL-A 45 usage_00810.pdb 1 VGALLVYDIAKH-LTYENVERWLKELR---DHA---DS-----NIVIMLVGNK--SDL-R 45 d w G k usage_00001.pdb 49 HMRTIKPEKHLRFCQEN--------GFSSHFV--- 72 usage_00180.pdb 47 DQREVNERQARELADKY--------GIPYFE---- 69 usage_00201.pdb 44 DKRQVSKERGEKLALDY--------GIKFME---- 66 usage_00202.pdb 44 DKRQVSKERGEKLALDY--------GIKFME---- 66 usage_00257.pdb 46 TKKVVDYTTAKEFADSL--------GIPFLET--- 69 usage_00261.pdb 35 DQREVNERQARELAEKY--------GIPYFE---- 57 usage_00365.pdb 49 SKKIVSEKSAQELAKSL--------GDIPLFL--- 72 usage_00395.pdb 44 D-EK-QRKACSKITKELLNKRGFPAIRDYHFV--- 73 usage_00664.pdb 46 RSREVSLEEGRHLAGTL--------SCKHIETS-- 70 usage_00708.pdb 46 HLRAVPTDEAKNFAMEN--------QMLFTE---- 68 usage_00810.pdb 46 HLRAVPTDEARAFAEKN--------GLSFIETSAL 72 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################