################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:03 2021 # Report_file: c_0680_65.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00038.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00081.pdb # 6: usage_00852.pdb # 7: usage_01205.pdb # 8: usage_01206.pdb # 9: usage_01210.pdb # # Length: 54 # Identity: 8/ 54 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 54 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 54 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_00077.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_00078.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_00079.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_00081.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_00852.pdb 1 --HPEKEGTGIRFF-KN----GVYIPARHEFVVHTNHSTDLGFK--G-QRI-K- 42 usage_01205.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVMTSLGGGIYELE 45 usage_01206.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 usage_01210.pdb 1 GATPLPGGAGTRFRLWTSTARTVAVRVN---------GTEHVTSLGGGIYE-LE 44 tPlpgGaGtRFr wt tVavrvn gTehv G l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################