################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:40 2021 # Report_file: c_0880_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # # Length: 117 # Identity: 63/117 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/117 ( 58.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/117 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------------------------------LYGVVGRKIASVEGFKYGDGILEVA 25 usage_00002.pdb 1 DAAKGEKEFNKCKACHMVQAPDGTDIVKGGKTGPNLYGVVGRKIASVEGFKYGDGILEVA 60 usage_00003.pdb 1 -----------------------------------LYGVVGRKIASVEGFKYGDGILEVA 25 usage_00036.pdb 1 --AKGEKEFNKCKACHMIQAP-DGTDIKGGKTGPNLYGVVGRKIASEEGFKYGEGILEVA 57 usage_00037.pdb 1 DAAKGEKEFNKCKACHMIQAPDGTDIIKGGKTGPNLYGVVGRKIASEEGFKYGEGILEVA 60 LYGVVGRKIAS EGFKYG GILEVA usage_00001.pdb 26 EKNPDMVWSEADLIEYVTDPKPWLVEKTGDSAAKTKMTFKLGKNQADVVAFLAQHSP 82 usage_00002.pdb 61 EKNPDMVWSEADLIEYVTDPKPWLVEKTGDSAAKTKKTFKLGKNQADVVAFLAQHSP 117 usage_00003.pdb 26 EKNPDMVWSEADLIEYVTDPKPWLVEKTGDSAAKTKKTFKLGKNQADVVAFLAQHSP 82 usage_00036.pdb 58 EKNPDLTWTEANLIEYVTDPKPLVKKMTDDKGAKTKMTFKMGKNQADVVAFLAQDDP 114 usage_00037.pdb 61 EKNPDLTWTEADLIEYVTDPKPWLVKMTDDKGAKTKMTFKMGKNQADVVAFLAQNS- 116 EKNPD W EAdLIEYVTDPKPwlv T D AKTK TFK GKNQADVVAFLAQ s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################