################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:58 2021 # Report_file: c_0288_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00111.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00387.pdb # 6: usage_00426.pdb # # Length: 140 # Identity: 22/140 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/140 ( 73.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/140 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00111.pdb 1 IKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-HYDL 59 usage_00218.pdb 1 --PHLVNADGQYLFCRYWKPT-GTPKALIFVSHGA---GEHSGR-YEELAR-L-GLDLLV 51 usage_00219.pdb 1 --PHLVNADGQYLFCRYWKPT-GTPKALIFVSHGA---GEHSGR-YEELAR-L-GLDLLV 51 usage_00220.pdb 1 --PHLVNADGQYLFCRYWKPT-GTPKALIFVSHGA---GEHSGR-YEELARMLMGLDLLV 53 usage_00387.pdb 1 --PHLVNADGQYLFCRYWKPT-GTPKALIFVSHGA---GEHSGR-YEELARMLMGLDLLV 53 usage_00426.pdb 1 --PHLVNADGQYLFCRYWKPT-GTPKALIFVSHGA---GEHSGR-YEELARMLMGLDLLV 53 phlvnaDgqyLfcrywKpt gtpKalIfvsHGa gehsgr yeelar L g dllv usage_00111.pdb 60 IQLSYRLLPE------------VSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLS 107 usage_00218.pdb 52 FAHDHV----GHGQSEGERV-VSDFHVFVRDVLQHVDS-QKDYPGLPVFLLGHS-GGAIA 104 usage_00219.pdb 52 FAHDHV----GHGQSEGERV-VSDFHVFVRDVLQHVDS-QKDYPGLPVFLLGHS-GGAIA 104 usage_00220.pdb 54 FAHDHV----GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA 109 usage_00387.pdb 54 FAHDHV----GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA 109 usage_00426.pdb 54 FAHDHV----GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA 109 fahdhv sdfhvfvrDVlqhvDs QkdYpglPvFllGhS Ggaia usage_00111.pdb 108 LLIARDR--DIDGVIDFY-- 123 usage_00218.pdb 105 ILTAAERPGHFAGVL---I- 120 usage_00219.pdb 105 ILTAAERPGHFAGVL---I- 120 usage_00220.pdb 110 ILTAAERPGHFAGMV---LI 126 usage_00387.pdb 110 ILTAAERPGHFAGMV---LI 126 usage_00426.pdb 110 ILTAAERPGHFAGMV---LI 126 iLtAaeR hfaG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################