################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:23 2021 # Report_file: c_0514_34.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00203.pdb # 2: usage_00204.pdb # 3: usage_00205.pdb # 4: usage_00482.pdb # 5: usage_00518.pdb # 6: usage_00590.pdb # # Length: 189 # Identity: 15/189 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/189 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/189 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00203.pdb 1 --TADELVETAEG-LGGLDIVVNNAGITRDRILFNMSDEEWDAVIAVHLRGHFLLTRNAA 57 usage_00204.pdb 1 RSTADELVETAEG-LGGLDIVVNNAGITRDRILFNMSDEEWDAVIAVHLRGHFLLTRNAA 59 usage_00205.pdb 1 --TADELVETAEG-LGGLDIVVNNAGITRDRILFNMSDEEWDAVIAVHLRGHFLLTRNAA 57 usage_00482.pdb 1 EHDVQNTFEELEK-HLGVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAM 59 usage_00518.pdb 1 -KGVEATYEEIAKTFGNIDIVVNVAGIFNDK--------DVQRTLLVNLGGIINSTLSAL 51 usage_00590.pdb 1 --AVRRLFATAEEAFGGVDVLVNNAGI-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 57 e e gg d VN AGI d v L G A usage_00203.pdb 58 AYWRSKAKAGDGTVYGRVINTSSEAGLSGPVGQPNYGAAKAGITALTLSAAR--ALERFG 115 usage_00204.pdb 60 AYWRSKAKAGDGTVYGRVINTSSEAGLSGPVGQPNYGAAKAGITALTLSAAR--ALERFG 117 usage_00205.pdb 58 AYWRSKAKAGDGTVYGRVINTSSEAGLSGPVGQPNYGAAKAGITALTLSAAR--ALERFG 115 usage_00482.pdb 60 RTMI-----------GSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAK--EVARKK 106 usage_00518.pdb 52 PYMGK---DN-GGKGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSG 107 usage_00590.pdb 58 QRL-R--------VGGRIIN-STSQVGLLHPSYGIYAAAKAGVEA-THVLSK--ELRGRD 104 G N ss gl Y A KaG t a r usage_00203.pdb 116 VRANAIAPRA-------RT---AMTAGV---FG-D--APEAEGQM----D-PLSTDHVVT 154 usage_00204.pdb 118 VRANAIAPRA-------RT---AMTAGV---F-----------QM----D-PLSTDHVVT 148 usage_00205.pdb 116 VRANAIAPRA-------RT---AMTAGV---FG-D--APELAGQM----D-PLSTDHVVT 154 usage_00482.pdb 107 IRVNVVAPGFVHTDMTK-E---HLKKNI---P--LGR--------------FGETIEVAH 143 usage_00518.pdb 108 IKFVTVCPGAT------MTDM---FTNFTEKI-IFP---------ETSLN-KQSAADVSR 147 usage_00590.pdb 105 ITVNAVAPGPT----------RDRFAKL--AP--LE--------------RLGTPQDIAG 136 n aP v usage_00203.pdb 155 LVQFLA--- 160 usage_00204.pdb 149 LVQFLAA-- 155 usage_00205.pdb 155 LVQFLAA-- 161 usage_00482.pdb 144 AVVFLLE-- 150 usage_00518.pdb 148 CILNVLEKD 156 usage_00590.pdb 137 AVAFLAG-- 143 v fl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################