################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:42 2021 # Report_file: c_0238_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # 8: usage_00104.pdb # # Length: 136 # Identity: 48/136 ( 35.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/136 ( 36.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/136 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----YEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 56 usage_00002.pdb 1 ---------VPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 51 usage_00003.pdb 1 -----EEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 55 usage_00022.pdb 1 -----EEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 55 usage_00023.pdb 1 ----YEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 56 usage_00038.pdb 1 TTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKI 60 usage_00039.pdb 1 -----EHAVIQVREENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKI 55 usage_00104.pdb 1 ----YEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQAL 56 L D L PD F RTK L LG P usage_00001.pdb 57 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 116 usage_00002.pdb 52 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 111 usage_00003.pdb 56 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 115 usage_00022.pdb 56 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 115 usage_00023.pdb 57 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 116 usage_00038.pdb 61 HGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGR 120 usage_00039.pdb 56 HGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGR 115 usage_00104.pdb 57 HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGR 116 HG Q R V F GE R LVATDVAARG DI LV Y LP E Y HR GR usage_00001.pdb 117 TGRA--GGRVVLLYG- 129 usage_00002.pdb 112 TGRAGRGGRVVLLYGP 127 usage_00003.pdb 116 TGRGGR---VVLLYG- 127 usage_00022.pdb 116 TGRAGRGGRVVLLYG- 130 usage_00023.pdb 117 TGRAGRGGRVVLLYG- 131 usage_00038.pdb 121 TGRAGNKGKAISFVT- 135 usage_00039.pdb 116 TGRAGNKGKAISF--- 128 usage_00104.pdb 117 TGRAGRGGRVVLLYG- 131 TGRa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################