################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:08 2021 # Report_file: c_0162_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00125.pdb # 2: usage_00126.pdb # 3: usage_00127.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00225.pdb # 8: usage_00252.pdb # 9: usage_00491.pdb # 10: usage_00495.pdb # 11: usage_00500.pdb # 12: usage_00530.pdb # # Length: 162 # Identity: 37/162 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/162 ( 42.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/162 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 -QVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 58 usage_00126.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 59 usage_00127.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 59 usage_00128.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 59 usage_00129.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 59 usage_00130.pdb 1 -QVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 58 usage_00225.pdb 1 -QVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNK------YYIVHLKRHFM 52 usage_00252.pdb 1 GQVVKAYDHKVH-QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 59 usage_00491.pdb 1 GKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 60 usage_00495.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKH---MKYYIVHLKRHFM 56 usage_00500.pdb 1 GQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 59 usage_00530.pdb 1 -QVVKAYDHKVH-QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 58 qVVkayD VA K N k f qA E r Le k h F usage_00125.pdb 59 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 118 usage_00126.pdb 60 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 119 usage_00127.pdb 60 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 119 usage_00128.pdb 60 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 119 usage_00129.pdb 60 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 119 usage_00130.pdb 59 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 118 usage_00225.pdb 53 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 112 usage_00252.pdb 60 FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK--NRIIHCDLK 117 usage_00491.pdb 61 FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE--NQLTHTDLK 118 usage_00495.pdb 57 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 116 usage_00500.pdb 60 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 119 usage_00530.pdb 59 FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK--NRIIHCDLK 116 FrnH C FE Ls Nly l F g sL l RkfA L L iiHcDLK usage_00125.pdb 119 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 142 usage_00126.pdb 120 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 143 usage_00127.pdb 120 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 143 usage_00128.pdb 120 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 143 usage_00129.pdb 120 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 143 usage_00130.pdb 119 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 142 usage_00225.pdb 113 PENILLCNPK-----------------RSAIKIVDFGSSCQL 137 usage_00252.pdb 118 PENILLKQQG-----------------RSGIKVIDFGSSCY- 141 usage_00491.pdb 119 PENILFVNSEFETLYNEHSCEEKSVKNTSIRVAD-FGSATFD 159 usage_00495.pdb 117 PENILLCNPK-----------------RSAIKIVDFGSSCQ- 140 usage_00500.pdb 120 PENILLCNPK-----------------RSAIKIVDFGSSCQL 144 usage_00530.pdb 117 PENILLKQQG-----------------RSGIKVIDFGSSCY- 140 PENILl rS ik FGSsc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################