################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:12 2021 # Report_file: c_0174_18.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00296.pdb # 2: usage_00297.pdb # 3: usage_00298.pdb # 4: usage_00299.pdb # 5: usage_00300.pdb # 6: usage_00301.pdb # 7: usage_00302.pdb # 8: usage_00303.pdb # 9: usage_00304.pdb # 10: usage_00305.pdb # 11: usage_00306.pdb # 12: usage_00307.pdb # 13: usage_00445.pdb # # Length: 202 # Identity: 147/202 ( 72.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/202 ( 73.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/202 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00296.pdb 1 GIVVGIKLD---------------QGLDGLSERCAQYKKDGVDFGKWRPVLR------SS 39 usage_00297.pdb 1 ---VGIKLD----------------GLDGLSERCAQYKKDGVDFGKWR----------SS 31 usage_00298.pdb 1 ---VGIKLD----------------GLDGLSERCAQYKKDGVDFGKWR----------SS 31 usage_00299.pdb 1 ---VGIKLD----------------GLDGLSERCAQYKKDGVDFGKWR----------SS 31 usage_00300.pdb 1 ---VGIKLDQ----LAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRPVLRIADQCPSS 53 usage_00301.pdb 1 ---VGIKLD----------------GLDGLSERCAQYKKDGVDFGKWRPV--------SS 33 usage_00302.pdb 1 ---VGIKLD----------------GLDGLSERCAQYKKDGVDFGKWRP---------SS 32 usage_00303.pdb 1 GIVVGIKLD--------------------LSERCAQYKKDGVDFGKW-----------SS 29 usage_00304.pdb 1 ---VGIKLD------------------DGLSERCAQYKKDGVDFGKWRP--------PSS 31 usage_00305.pdb 1 --VVGIKL--------------------GLSERCAQYKKDGVDFGKWRP--------PSS 30 usage_00306.pdb 1 --VVGIKLD--------------------LSERCAQYKKDGVDFGKW-----------SS 27 usage_00307.pdb 1 ---VGIKLD------------------DGLSERCAQYKKDGVDFGKWR----------SS 29 usage_00445.pdb 1 --VVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSS 58 VGIKL LSERCAQYKKDGVDFGKW SS usage_00296.pdb 40 LAIQENANALARYASICQQNGLVPIVEPEVIP------EHCQYVTEKVLAAVYKALNDHH 93 usage_00297.pdb 32 LAIQENANALARYASICQQNGLVPIVEPE----------HCQYVTEKVLAAVYKALNDHH 81 usage_00298.pdb 32 LAIQENANALARYASICQQNGLVPIVEPEV---------HCQYVTEKVLAAVYKALNDHH 82 usage_00299.pdb 32 LAIQENANALARYASICQQNGLVPIVEP--------DLEHCQYVTEKVLAAVYKALNDHH 83 usage_00300.pdb 54 LAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHH 113 usage_00301.pdb 34 LAIQENANALARYASICQQNGLVPIVEPE--------LEHCQYVTEKVLAAVYKALNDHH 85 usage_00302.pdb 33 LAIQENANALARYASICQQNGLVPIVEPEVI---DHDLEHCQYVTEKVLAAVYKALNDHH 89 usage_00303.pdb 30 LAIQENANALARYASICQQNGLVPIVEPEVIP----DLEHCQYVTEKVLAAVYKALNDHH 85 usage_00304.pdb 32 LAIQENANALARYASICQQNGLVPIVEPE-------DLEHCQYVTEKVLAAVYKALNDHH 84 usage_00305.pdb 31 LAIQENANALARYASICQQNGLVPIVEPEV-----HDLEHCQYVTEKVLAAVYKALNDHH 85 usage_00306.pdb 28 LAIQENANALARYASICQQNGLVPIVEPEVIP----DLEHCQYVTEKVLAAVYKALNDHH 83 usage_00307.pdb 30 LAIQENANALARYASICQQNGLVPIVEPE-------DLEHCQYVTEKVLAAVYKALNDHH 82 usage_00445.pdb 59 LAIQENANTLARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHH 118 LAIQENANaLARYASICQQNGLVPIVEP HCQYVTEKVLAAVYKALNDHH usage_00296.pdb 94 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 145 usage_00297.pdb 82 VYLEGTLLKPNMVTA-------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 134 usage_00298.pdb 83 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 134 usage_00299.pdb 84 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 135 usage_00300.pdb 114 VYLEGTLLKPNMVTA-------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 166 usage_00301.pdb 86 VYLEGTLLKPNMVTA-------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 138 usage_00302.pdb 90 VYLEGTLLKPNMVTA-------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 142 usage_00303.pdb 86 VYLEGTLLKPNMVT------KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 139 usage_00304.pdb 85 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 136 usage_00305.pdb 86 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 137 usage_00306.pdb 84 VYLEGTLLKPNMVTA--ACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 141 usage_00307.pdb 83 VYLEGTLLKPNMVT--------YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 134 usage_00445.pdb 119 VYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT 178 VYLEGTLLKPNMVT YTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDAT usage_00296.pdb 146 LNLNAINLCPLPKPWKLSFSYG 167 usage_00297.pdb 135 LNLNAINLCPLPKPWKLSFSYG 156 usage_00298.pdb 135 LNLNAINLCPLPKPWKLSFSYG 156 usage_00299.pdb 136 LNLNAINLCPLPKPWKLSFSYG 157 usage_00300.pdb 167 LNLNAINLCPLPKPWKLSFSYG 188 usage_00301.pdb 139 LNLNAINLCPLPKPWKLSFSYG 160 usage_00302.pdb 143 LNLNAINLCPLPKPWKLSFSYG 164 usage_00303.pdb 140 LNLNAINLCPLPKPWKLSFSYG 161 usage_00304.pdb 137 LNLNAINLCPLPKPWKLSFSYG 158 usage_00305.pdb 138 LNLNAINLCPLPKPWKLSFSYG 159 usage_00306.pdb 142 LNLNAINLCPLPKPWKLSFSYG 163 usage_00307.pdb 135 LNLNAINLCPLPKPWKLSFSYG 156 usage_00445.pdb 179 LNLNAINLCPLPKPWKLSFSYG 200 LNLNAINLCPLPKPWKLSFSYG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################