################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:25:00 2021 # Report_file: c_1172_172.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00070.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00905.pdb # 5: usage_00906.pdb # 6: usage_01940.pdb # 7: usage_02499.pdb # 8: usage_03024.pdb # 9: usage_03134.pdb # 10: usage_03135.pdb # 11: usage_03136.pdb # 12: usage_03137.pdb # 13: usage_03138.pdb # 14: usage_03139.pdb # 15: usage_03140.pdb # 16: usage_03141.pdb # 17: usage_03142.pdb # 18: usage_03143.pdb # 19: usage_03144.pdb # 20: usage_03179.pdb # 21: usage_03180.pdb # 22: usage_03181.pdb # 23: usage_04521.pdb # 24: usage_04729.pdb # 25: usage_04730.pdb # 26: usage_04731.pdb # 27: usage_04732.pdb # # Length: 31 # Identity: 2/ 31 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 31 ( 9.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 31 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_00071.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_00072.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_00905.pdb 1 LGKFTG-A-----NTLEVEGENGKTVIN--- 22 usage_00906.pdb 1 LGKFTG-A-----NTLEVEGENGKTVIN--- 22 usage_01940.pdb 1 YGTFAD-A-----NTLLVDLNDGGTESVT-- 23 usage_02499.pdb 1 RGELIDSTPGLARHRIKATAADGSTSEHE-- 29 usage_03024.pdb 1 HGKLLA-G-----KKVEVTAADGSSQVLDTE 25 usage_03134.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03135.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03136.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03137.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03138.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03139.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03140.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03141.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03142.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03143.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03144.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03179.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03180.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_03181.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_04521.pdb 1 HGKLLA-G-----KKVEVTKADGTTEVIE-- 23 usage_04729.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_04730.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_04731.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 usage_04732.pdb 1 YGKITG-K-----NQVTATKADGGTQVID-- 23 G G t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################