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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:59:08 2021
# Report_file: c_1402_30.html
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#====================================
# Aligned_structures: 8
#   1: usage_00253.pdb
#   2: usage_00254.pdb
#   3: usage_00325.pdb
#   4: usage_00326.pdb
#   5: usage_00327.pdb
#   6: usage_00328.pdb
#   7: usage_00620.pdb
#   8: usage_00682.pdb
#
# Length:         80
# Identity:        7/ 80 (  8.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     43/ 80 ( 53.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/ 80 ( 46.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00253.pdb         1  SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   51
usage_00254.pdb         1  SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   51
usage_00325.pdb         1  ------AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   45
usage_00326.pdb         1  ------AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   45
usage_00327.pdb         1  ------AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   45
usage_00328.pdb         1  -ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   50
usage_00620.pdb         1  -------------KVFIIIAVFFICFVPFHFARIPYTLSQTRDVFD-CTAENTLFYVKES   46
usage_00682.pdb         1  SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT---HQGSDF------GPIFMTI   51
                                        mViImviaFlICwlPyagvafyift   hqgsD       gpifmti

usage_00253.pdb        52  PAFFAKTSAVYNPVIYIMM-   70
usage_00254.pdb        52  PAFFAKTSAVYNPVIYIMM-   70
usage_00325.pdb        46  PAFFAKTSAVYNPVIYIMM-   64
usage_00326.pdb        46  PAFFAKTSAVYNPVIYIMM-   64
usage_00327.pdb        46  PAFFAKTSAVYNPVIYIMMN   65
usage_00328.pdb        51  PAFFAK--------------   56
usage_00620.pdb        47  TLWLTSLNACL---------   57
usage_00682.pdb        52  PAFFAKTSAVYNPVIYIMM-   70
                           paffak              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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