################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:20 2021 # Report_file: c_0790_20.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00679.pdb # 2: usage_00680.pdb # 3: usage_00681.pdb # 4: usage_00682.pdb # 5: usage_00821.pdb # 6: usage_00822.pdb # 7: usage_00840.pdb # 8: usage_01003.pdb # 9: usage_01004.pdb # 10: usage_01005.pdb # # Length: 70 # Identity: 8/ 70 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 70 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 70 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00679.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_00680.pdb 1 ------GQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 48 usage_00681.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_00682.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_00821.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_00822.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_00840.pdb 1 -TNVV-MMG-MGEPLLN-LNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLGD 54 usage_01003.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_01004.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 usage_01005.pdb 1 TPVVVLGQAKCIQPTSSVSPEQVARVVARLR--RGW----IGVYVTTGSFSRQAQVEIID 54 gqa ciqPtss speqVarvvarLr rgw igvyvTtG srqAqveiiD usage_00679.pdb 55 DQYPVVLIA- 63 usage_00680.pdb 49 DQYPVVLIAG 58 usage_00681.pdb 55 DQYPVVLIAG 64 usage_00682.pdb 55 DQYPVVLIAG 64 usage_00821.pdb 55 DQYPVVLIAG 64 usage_00822.pdb 55 DQYPVVLIAG 64 usage_00840.pdb 55 MIDVALAIS- 63 usage_01003.pdb 55 DQYPVVLIAG 64 usage_01004.pdb 55 DQYPVVLIAG 64 usage_01005.pdb 55 DQYPVVLIAG 64 dqypvvlIa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################