################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:38 2021 # Report_file: c_0941_43.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00113.pdb # 2: usage_00154.pdb # 3: usage_00169.pdb # 4: usage_00196.pdb # 5: usage_00268.pdb # 6: usage_00271.pdb # 7: usage_00315.pdb # 8: usage_00352.pdb # 9: usage_00472.pdb # 10: usage_00473.pdb # 11: usage_00674.pdb # 12: usage_00713.pdb # 13: usage_00818.pdb # 14: usage_00879.pdb # 15: usage_01166.pdb # 16: usage_01169.pdb # 17: usage_01185.pdb # 18: usage_01211.pdb # 19: usage_01340.pdb # 20: usage_01347.pdb # 21: usage_01540.pdb # 22: usage_01541.pdb # 23: usage_01920.pdb # 24: usage_01940.pdb # 25: usage_02166.pdb # # Length: 58 # Identity: 27/ 58 ( 46.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 58 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 58 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 AAKTTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 54 usage_00154.pdb 1 ---TTAPSVYPLAPV--------SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 45 usage_00169.pdb 1 ---TTAPSVYPLVPV--CGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 51 usage_00196.pdb 1 -----APSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 49 usage_00268.pdb 1 ---TTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 51 usage_00271.pdb 1 SAKTTAPSVYPLAPV--C----GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 50 usage_00315.pdb 1 ---TTAPSVYPLAPV--C---TGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 48 usage_00352.pdb 1 ---TTAPSVYPLAPV--------SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 45 usage_00472.pdb 1 ---TTAPSVYPLAPV--CG-TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 50 usage_00473.pdb 1 ---TTAPSVYPLAPV--CG-TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 50 usage_00674.pdb 1 -----APSVYPLAPV---------SVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 42 usage_00713.pdb 1 ---TTAPSVYPLAPV--------SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 45 usage_00818.pdb 1 ---TTAPSVYPLAPV--C----GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 47 usage_00879.pdb 1 ---TTAPSVYPLAPV--C--TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 49 usage_01166.pdb 1 ---TTAPSVYPLAPV--C-----SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 46 usage_01169.pdb 1 ---TTAPSVYPLAPV--C------SVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 45 usage_01185.pdb 1 --------VYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 46 usage_01211.pdb 1 -------SVYPLAPV--------SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 41 usage_01340.pdb 1 ---TTAPSVYPLAP-------TGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 46 usage_01347.pdb 1 ---TTAPSVYPLAPV--C-----SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 46 usage_01540.pdb 1 ---TTAPSVYPLAPVTG------SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 47 usage_01541.pdb 1 ---TTAPSVYPLAPV--GD-TTGSSVTLGCLVKGYFPEPVTLTWNSGLSSGVH-TF-- 49 usage_01920.pdb 1 ---TTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-- 51 usage_01940.pdb 1 ---TTAPSVYPLAPV--C-----SSVTLGCLVKGYFPEPVTLTWNS---GLSSGVHTF 45 usage_02166.pdb 1 ---TTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSG--SLSSGVHTF 51 VYPLaP SVTLGCLVKGYFPEPVTLTWNS s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################