################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:05 2021 # Report_file: c_1371_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00188.pdb # 2: usage_00189.pdb # 3: usage_00190.pdb # 4: usage_00191.pdb # 5: usage_00192.pdb # 6: usage_00194.pdb # 7: usage_00195.pdb # 8: usage_00196.pdb # 9: usage_00197.pdb # 10: usage_01478.pdb # 11: usage_01517.pdb # # Length: 101 # Identity: 60/101 ( 59.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/101 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/101 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00189.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00190.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00191.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00192.pdb 1 -SLQATAEANNLAAVATAKDTYNKK-EEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 58 usage_00194.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00195.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00196.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_00197.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 usage_01478.pdb 1 -SLQATAEANNLAAVATAKDTYNKK-EEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 58 usage_01517.pdb 1 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV 60 LQATAEANNLAAVATAKDTYNKK EEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGV usage_00188.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNI----- 96 usage_00189.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKN------ 95 usage_00190.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAAR 101 usage_00191.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKN------ 95 usage_00192.pdb 59 KK-GGEEFSRRYLQQLESEIDELYIQYIKHNDSKT------ 92 usage_00194.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKT------ 95 usage_00195.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSK------- 94 usage_00196.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKT------ 95 usage_00197.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKT------ 95 usage_01478.pdb 59 KK-G----GEEFSRRYLQQLESEIDELYIQYIKHN------ 88 usage_01517.pdb 61 KKMGGEEFSRRYLQQLESEIDELYIQYI------------- 88 KK G srrylqqleseidelyiqyi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################