################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:53 2021 # Report_file: c_1209_115.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00090.pdb # 2: usage_00926.pdb # 3: usage_00927.pdb # 4: usage_00928.pdb # 5: usage_01202.pdb # 6: usage_01378.pdb # 7: usage_01379.pdb # 8: usage_01380.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 47 ( 38.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 47 ( 48.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 TMLQIEFITD-L--------GARVTVNVEHESRL-LDVQRHYGRLG- 36 usage_00926.pdb 1 --LQIEFITD-L--------GARVTVNVEHESRL-LDVQRHYGRLG- 34 usage_00927.pdb 1 TMLQIEFITD-L--------GARVTVNVEHESRL-LDVQRHYGRLG- 36 usage_00928.pdb 1 TMLQIEFITD-L--------GARVTVNVEHESRL-LDVQRHYGRLG- 36 usage_01202.pdb 1 --YVQAWENYVDLPDRIYVPVRAYARISSDP-I-ESKY--------I 35 usage_01378.pdb 1 -TLHIEFITD-L--------GAKVTVDVESADKL-LDVQRQYGRLG- 35 usage_01379.pdb 1 -TLHIEFITD-L--------GAKVTVDVESADKL-LDVQRQYGRLG- 35 usage_01380.pdb 1 -TLHIEFITD-L--------GAKVTVDVESADKL-LDVQRQYGRLG- 35 l iefitd l ga vtv ve ldv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################