################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:49:55 2021 # Report_file: c_1012_65.html ################################################################################################ #==================================== # Aligned_structures: 55 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00028.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # 8: usage_00031.pdb # 9: usage_00032.pdb # 10: usage_00033.pdb # 11: usage_00034.pdb # 12: usage_00040.pdb # 13: usage_00041.pdb # 14: usage_00047.pdb # 15: usage_00048.pdb # 16: usage_00061.pdb # 17: usage_00065.pdb # 18: usage_00066.pdb # 19: usage_00067.pdb # 20: usage_00075.pdb # 21: usage_00122.pdb # 22: usage_00143.pdb # 23: usage_00145.pdb # 24: usage_00146.pdb # 25: usage_00147.pdb # 26: usage_00148.pdb # 27: usage_00174.pdb # 28: usage_00180.pdb # 29: usage_00205.pdb # 30: usage_00206.pdb # 31: usage_00207.pdb # 32: usage_00208.pdb # 33: usage_00209.pdb # 34: usage_00218.pdb # 35: usage_00219.pdb # 36: usage_00224.pdb # 37: usage_00225.pdb # 38: usage_00226.pdb # 39: usage_00229.pdb # 40: usage_00230.pdb # 41: usage_00231.pdb # 42: usage_00245.pdb # 43: usage_00246.pdb # 44: usage_00260.pdb # 45: usage_00277.pdb # 46: usage_00278.pdb # 47: usage_00279.pdb # 48: usage_00330.pdb # 49: usage_00358.pdb # 50: usage_00437.pdb # 51: usage_00438.pdb # 52: usage_00472.pdb # 53: usage_00565.pdb # 54: usage_00566.pdb # 55: usage_00606.pdb # # Length: 66 # Identity: 22/ 66 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 66 ( 43.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 66 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 ---IKCVVVGDGAVGKTCLLISYTTNALPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 53 usage_00017.pdb 1 ---IKCVVVGDGAVGKTCLLISYTTNALPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 53 usage_00018.pdb 1 ----KCVVVGDGAVGKTCLLISYTTNAFPGYI---P-TVF-DNYSANVMVD-KPVNLGLW 50 usage_00019.pdb 1 ----KCVVVGDGAVGKTCLLISYTTNAFP--EY-IP-TVF-DNYSANVMVDGKPVNLGLW 51 usage_00028.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00029.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00030.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00031.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00032.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00033.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00034.pdb 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00040.pdb 1 GQAIKCVVVGDGAVGKTCLLISYTTNAFSG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00041.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFSG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00047.pdb 1 --AIKCVVVGDGAVGKTCLLISYTTNAFPG-----------DNYSANVMVDGKPVNLGLW 47 usage_00048.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-E---Y----IDNYSANVMVDGKPVNLGLW 51 usage_00061.pdb 1 --GVKCVLVGDGAVGKTSLVVSYTT----------P-TAF-DNFSAVVSVDGRPVRLQLC 46 usage_00065.pdb 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00066.pdb 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00067.pdb 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00075.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00122.pdb 1 MQAIKCVVVGDVAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00143.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00145.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00146.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00147.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00148.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00174.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00180.pdb 1 ---IKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 53 usage_00205.pdb 1 -QAIKCVVVGDVAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDSKPVNLGLW 55 usage_00206.pdb 1 MQAIKCVVVGDVAVGKTCLLISYTTNAFP-----IP-TVF-DNYSANVMV---PVNLGLW 50 usage_00207.pdb 1 -QAIKCVVVGDVAVGKTCLLISYTTNAFPG-I---P-TVF-DNYSANVMVDSKPVNLGLW 53 usage_00208.pdb 1 MQAIKCVVVGDVAVGKTCLLISYTTNAFP--I---P-TVF-DNYSANVMV----VNLGLW 49 usage_00209.pdb 1 MQAIKCVVVGDVAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMV---PVNLGLW 53 usage_00218.pdb 1 PQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00219.pdb 1 PQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00224.pdb 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 56 usage_00225.pdb 1 -RFIKCVTVGDGAVGKTCMLISYTG------P--TV---F-DNFSANVVVDGSTVNLGLW 47 usage_00226.pdb 1 -RFIKCVTVGDGAVGKTCMLISYTG------P--TV---F-DNFSANVVVDGSTVNLGLW 47 usage_00229.pdb 1 ----KCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 52 usage_00230.pdb 1 ---IKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 53 usage_00231.pdb 1 ---IKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 53 usage_00245.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00246.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00260.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-E---YI-PF-DNYSANVMVDGKPVNLGLW 53 usage_00277.pdb 1 SKFIKCVTVGDGAVGKTCMLICYTSNKFPT-DY-IP-TVF-DNFSANVAVDGQIVNLGLW 56 usage_00278.pdb 1 -KFIKCVTVGDGAVGKTCMLICYTSNKFPT-DY-IP-TVF-DNFSANVA-----VNLGLW 50 usage_00279.pdb 1 SKFIKCVTVGDGAVGKTCMLICYTSNKFPT-DY-IP-TVF-DNFSANVAVDGQIVNLGLW 56 usage_00330.pdb 1 -RFIKCVTVGDGAVGKTCMLISYTSNTFPT-P--TV---F-DNFSANVVVDGNTVNLGLW 52 usage_00358.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00437.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00438.pdb 1 ----KCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 52 usage_00472.pdb 1 TRFIKCVTVGDGAVGKTCMLICYTSNKFPT-DY-IP-TVF-DNFSANVSVDGSVVNLGLW 56 usage_00565.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00566.pdb 1 -QAIKCVVVGDGAVGKTCLLISYTTNAFPG-EY-IP-TVF-DNYSANVMVDGKPVNLGLW 55 usage_00606.pdb 1 --AIKCVVVGDGAVGKTCLLISYTTNAFPG-YIPTV---F-DNYSANVM---KPVNLGLW 50 KCV VGD AVGKTc li YT DN SAnV VnLgLw usage_00016.pdb 54 DTA--- 56 usage_00017.pdb 54 DTA--- 56 usage_00018.pdb 51 DTAGL- 55 usage_00019.pdb 52 DTAGL- 56 usage_00028.pdb 56 DTA--- 58 usage_00029.pdb 56 DTAGQ- 60 usage_00030.pdb 56 DTA--- 58 usage_00031.pdb 56 DTA--- 58 usage_00032.pdb 56 DTAGQ- 60 usage_00033.pdb 56 DTA--- 58 usage_00034.pdb 57 DTAGQ- 61 usage_00040.pdb 57 DTA--- 59 usage_00041.pdb 56 DTAGQ- 60 usage_00047.pdb 48 DTAGQ- 52 usage_00048.pdb 52 DTAGQ- 56 usage_00061.pdb 47 D----- 47 usage_00065.pdb 57 DTA--- 59 usage_00066.pdb 57 DTA--- 59 usage_00067.pdb 57 DTA--- 59 usage_00075.pdb 56 DTA--- 58 usage_00122.pdb 57 DTA--- 59 usage_00143.pdb 56 DTA--- 58 usage_00145.pdb 56 DTA--- 58 usage_00146.pdb 56 DT---- 57 usage_00147.pdb 56 DTA--- 58 usage_00148.pdb 56 DT---- 57 usage_00174.pdb 56 DTA--- 58 usage_00180.pdb 54 D----- 54 usage_00205.pdb 56 DTAGQ- 60 usage_00206.pdb 51 DTAGQ- 55 usage_00207.pdb 54 DTAGQ- 58 usage_00208.pdb 50 DTAGQ- 54 usage_00209.pdb 54 DTAGQ- 58 usage_00218.pdb 57 DTA--- 59 usage_00219.pdb 57 DTA--- 59 usage_00224.pdb 57 D----- 57 usage_00225.pdb 48 D----- 48 usage_00226.pdb 48 D----- 48 usage_00229.pdb 53 DTA--- 55 usage_00230.pdb 54 DTA--- 56 usage_00231.pdb 54 DTA--- 56 usage_00245.pdb 56 DTAGQ- 60 usage_00246.pdb 56 DTA--- 58 usage_00260.pdb 54 DTA--- 56 usage_00277.pdb 57 D----- 57 usage_00278.pdb 51 DTAG-- 54 usage_00279.pdb 57 DTAGQE 62 usage_00330.pdb 53 D----- 53 usage_00358.pdb 56 DTA--- 58 usage_00437.pdb 56 D----- 56 usage_00438.pdb 53 D----- 53 usage_00472.pdb 57 DTA--- 59 usage_00565.pdb 56 DTAGQ- 60 usage_00566.pdb 56 DTAGQ- 60 usage_00606.pdb 51 D----- 51 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################