################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:15 2021 # Report_file: c_1068_33.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00035.pdb # 5: usage_00077.pdb # 6: usage_00264.pdb # 7: usage_00311.pdb # 8: usage_00328.pdb # 9: usage_00329.pdb # 10: usage_00354.pdb # 11: usage_00355.pdb # 12: usage_00357.pdb # 13: usage_00465.pdb # 14: usage_00466.pdb # 15: usage_00477.pdb # 16: usage_00496.pdb # # Length: 69 # Identity: 19/ 69 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 69 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 69 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 PKKLDEICAKYMLQARG-----------GTYDISNKRRLGLTELQAAHEMAEGVAKMIEI 49 usage_00014.pdb 1 --NFKEICEKHGIQPRGT-HGEHTESVGGIYDLSNKRRLGLTELDAVTEMHSGVRALLEL 57 usage_00015.pdb 1 PKKLDEICAKYMLQARGLYGEHTESP-DGTYDISNKRRLGLTELQAAHEMAEGVAKMIEI 59 usage_00035.pdb 1 RKVLEDIASKFNLQVRGTRGEHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 59 usage_00077.pdb 1 RKVLEDIASKFNLQVRGTRGDHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 59 usage_00264.pdb 1 RKVLEDIASKFNLQVRGTRGEHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 59 usage_00311.pdb 1 RAKLEEVAGKYNLQVA------------GIYDISNKRRMGLTEFQAVKEMQDGILELIKI 48 usage_00328.pdb 1 RKVLEDIASKFNLQVRG----------GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 50 usage_00329.pdb 1 RKVLEDIASKFNLQVRG-----------GVYDISNKRRLGLTEYQAVREMQDGILEMIKM 49 usage_00354.pdb 1 REKLEEVAGKYNLQVRGTRGEHTEAE-GGIYDISNKRRMGLTEFQAVKEMQDGILELIKI 59 usage_00355.pdb 1 REKLEEVAGKYNLQVRGTRGEHTEAE-GGIYDISNKRRMGLTEFQAVKEMQDGILELIKI 59 usage_00357.pdb 1 EEKLEEVAGKYNLQVRGT---------GGIYDISNKRRMGLTEFQAVKEMEDGILELIKI 51 usage_00465.pdb 1 RKVLEDIASKFNLQVRGTRGEHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 59 usage_00466.pdb 1 RKVLEDIASKFNLQVRGTRGEHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 59 usage_00477.pdb 1 PKKLDEICAKYMLQARG-----------GTYDISNKRRLGLTELQAAHEMAEGVAKMIEI 49 usage_00496.pdb 1 -KVLEDIASKFNLQVRGTRGEHTESE-GGVYDISNKRRLGLTEYQAVREMQDGILEMIKM 58 l K lQ r G YDiSNKRR GLTE qA EM G i usage_00013.pdb 50 EKGL----- 53 usage_00014.pdb 58 EVMLQEYNK 66 usage_00015.pdb 60 EK------- 61 usage_00035.pdb 60 EKA------ 62 usage_00077.pdb 60 EKA------ 62 usage_00264.pdb 60 EKA------ 62 usage_00311.pdb 49 EKE------ 51 usage_00328.pdb 51 EKA------ 53 usage_00329.pdb 50 EKA------ 52 usage_00354.pdb 60 EKE------ 62 usage_00355.pdb 60 EKEM----- 63 usage_00357.pdb 52 EKE------ 54 usage_00465.pdb 60 EKA------ 62 usage_00466.pdb 60 EKA------ 62 usage_00477.pdb 50 EKGL----- 53 usage_00496.pdb 59 EKA------ 61 Ek #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################