################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:47 2021 # Report_file: c_0199_19.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00174.pdb # 2: usage_00175.pdb # 3: usage_00211.pdb # 4: usage_00230.pdb # 5: usage_00231.pdb # 6: usage_00312.pdb # 7: usage_00313.pdb # 8: usage_00399.pdb # 9: usage_00400.pdb # # Length: 164 # Identity: 61/164 ( 37.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/164 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/164 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00175.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00211.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00230.pdb 1 ------TEERKAAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPS-GT-GNQVS-I 51 usage_00231.pdb 1 ------TEERKAAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPS-GT-GNQVS-I 51 usage_00312.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00313.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00399.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 usage_00400.pdb 1 SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTG-TQANLVALL 55 A VGDDVYG DPT N L AAE GKEAA F P T N V usage_00174.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00175.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00211.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00230.pdb 52 AHTQRGDEVILEADSHIFWYEVGAAV-LSGV-PHPVPGKN-G-ADPDDVRKAIRPRNIHF 107 usage_00231.pdb 52 AHTQRGDEVILEADSHIFWYEVGAAV-LSGV-PHPVPGKN-G-ADPDDVRKAIRPRNIHF 107 usage_00312.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00313.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00399.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 usage_00400.pdb 56 SHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHF 115 H RG E I H E G A L P P G D V I P IHF usage_00174.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVD-- 154 usage_00175.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVD-- 154 usage_00211.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRERNLALHVD-- 154 usage_00230.pdb 108 PRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHI--- 148 usage_00231.pdb 108 PRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDG- 150 usage_00312.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVDGA 156 usage_00313.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVDGA 156 usage_00399.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVD-- 154 usage_00400.pdb 116 ARTKLLSLENTHN---GKVLPREYLKEAWEFTRKRNLALHVDGA 156 RT L ENTHN G V P E KE H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################