################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:54 2021 # Report_file: c_1476_104.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00124.pdb # 4: usage_01333.pdb # 5: usage_01334.pdb # 6: usage_01441.pdb # 7: usage_01442.pdb # 8: usage_01443.pdb # 9: usage_01444.pdb # 10: usage_01445.pdb # 11: usage_02067.pdb # 12: usage_02068.pdb # 13: usage_02069.pdb # 14: usage_02073.pdb # 15: usage_02074.pdb # 16: usage_02212.pdb # 17: usage_02213.pdb # 18: usage_02361.pdb # 19: usage_02362.pdb # 20: usage_02462.pdb # 21: usage_02463.pdb # # Length: 35 # Identity: 28/ 35 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 35 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 35 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF- 34 usage_00123.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_00124.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_01333.pdb 1 GKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAI-- 33 usage_01334.pdb 1 GKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAI-- 33 usage_01441.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKG--- 32 usage_01442.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_01443.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKG--- 32 usage_01444.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF- 34 usage_01445.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF- 34 usage_02067.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_02068.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF- 34 usage_02069.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF- 34 usage_02073.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_02074.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 usage_02212.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFP 35 usage_02213.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKG--- 32 usage_02361.pdb 1 GKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAIFP 35 usage_02362.pdb 1 GKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAIFP 35 usage_02462.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKG--- 32 usage_02463.pdb 1 GKERMYEENSQPRRNLTKLSLIFSHMLAELKGI-- 33 GKERMYEE SQ RRNLTKLSLIFSHMLAE K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################