################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:07 2021 # Report_file: c_1314_43.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00003.pdb # 2: usage_00006.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00028.pdb # 6: usage_00117.pdb # 7: usage_00132.pdb # 8: usage_00133.pdb # 9: usage_00135.pdb # 10: usage_00307.pdb # 11: usage_00383.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 40 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --PYEDLLRKIAEEGSHKD-T--G------TTS------- 22 usage_00006.pdb 1 -------DPQFALYGEHIH-TGHG------HGLGIIGP-- 24 usage_00015.pdb 1 -QPYLDLAKKVLDEGHFKP-DITH------TGTY--S--- 27 usage_00016.pdb 1 -QPYLDLAKKVLDEGHFKP-DITH------TGTY--S--- 27 usage_00028.pdb 1 -LP----YIEYAMKNVTQKNSIC-PTCGKTETITQECTV- 33 usage_00117.pdb 1 EQPYLDLAKKVLDEGHFKP-DRTH------TGTY------ 27 usage_00132.pdb 1 -QPYLDLAKKVLDEGHFKP-DRTH------TGTY--SIFG 30 usage_00133.pdb 1 -QPYLDLAKKVLDEGHFKP-DRTH------TGTY--SIFG 30 usage_00135.pdb 1 -QPYLDLAKKVLDEGHFKP-DRTH------TGTY--SIFG 30 usage_00307.pdb 1 -QPYLDLAKKVLDEGHFKP-DRTH------TGTY------ 26 usage_00383.pdb 1 --PYEDLLRFVLETGTPKS-D---------TGTR--SLFG 26 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################