################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:35:49 2021 # Report_file: c_1484_326.html ################################################################################################ #==================================== # Aligned_structures: 45 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00168.pdb # 4: usage_00169.pdb # 5: usage_00529.pdb # 6: usage_00530.pdb # 7: usage_01101.pdb # 8: usage_01102.pdb # 9: usage_01116.pdb # 10: usage_01118.pdb # 11: usage_01119.pdb # 12: usage_01192.pdb # 13: usage_01193.pdb # 14: usage_01194.pdb # 15: usage_01195.pdb # 16: usage_01196.pdb # 17: usage_01197.pdb # 18: usage_01221.pdb # 19: usage_01222.pdb # 20: usage_01299.pdb # 21: usage_01300.pdb # 22: usage_01535.pdb # 23: usage_01536.pdb # 24: usage_01627.pdb # 25: usage_01628.pdb # 26: usage_01634.pdb # 27: usage_01640.pdb # 28: usage_01641.pdb # 29: usage_01997.pdb # 30: usage_01998.pdb # 31: usage_01999.pdb # 32: usage_02446.pdb # 33: usage_02447.pdb # 34: usage_02489.pdb # 35: usage_02490.pdb # 36: usage_02492.pdb # 37: usage_03213.pdb # 38: usage_03214.pdb # 39: usage_04342.pdb # 40: usage_04343.pdb # 41: usage_04348.pdb # 42: usage_04349.pdb # 43: usage_04350.pdb # 44: usage_04351.pdb # 45: usage_04352.pdb # # Length: 79 # Identity: 49/ 79 ( 62.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 79 ( 62.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 79 ( 38.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ------EVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 54 usage_00009.pdb 1 --------LKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 52 usage_00168.pdb 1 ---------------KVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 45 usage_00169.pdb 1 -------------IEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 47 usage_00529.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_00530.pdb 1 ------------------------KNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 36 usage_01101.pdb 1 -----------------QHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 43 usage_01102.pdb 1 ---------------KVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 45 usage_01116.pdb 1 -------------IEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 47 usage_01118.pdb 1 -------------IEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 47 usage_01119.pdb 1 -------------------IQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 41 usage_01192.pdb 1 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 60 usage_01193.pdb 1 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 60 usage_01194.pdb 1 ----RIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 56 usage_01195.pdb 1 ----RIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 56 usage_01196.pdb 1 --RSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 58 usage_01197.pdb 1 -LRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 59 usage_01221.pdb 1 -------------IEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 47 usage_01222.pdb 1 -------------------IQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 41 usage_01299.pdb 1 -------------------IQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 41 usage_01300.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_01535.pdb 1 ------------VIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 48 usage_01536.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_01627.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_01628.pdb 1 ---------------------LLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 39 usage_01634.pdb 1 -------VLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 53 usage_01640.pdb 1 --------LKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 52 usage_01641.pdb 1 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 60 usage_01997.pdb 1 -----IEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 55 usage_01998.pdb 1 --RSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 58 usage_01999.pdb 1 ----------RKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 50 usage_02446.pdb 1 ---------------KVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 45 usage_02447.pdb 1 ----------------------LQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 38 usage_02489.pdb 1 --------------EKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 46 usage_02490.pdb 1 -------------------IQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 41 usage_02492.pdb 1 -------------------IQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 41 usage_03213.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_03214.pdb 1 ---------------KVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 45 usage_04342.pdb 1 -------------IEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 47 usage_04343.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_04348.pdb 1 -----IEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 55 usage_04349.pdb 1 -----IEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 55 usage_04350.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 usage_04351.pdb 1 ----------------------LQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 38 usage_04352.pdb 1 ----------------VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV 44 KNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREV usage_00008.pdb 55 DLKDYEDQQKQLEQ----- 68 usage_00009.pdb 53 DLKDYEDQQKQLEQVIAK- 70 usage_00168.pdb 46 DLKDYEDQQKQLEQVIA-- 62 usage_00169.pdb 48 DLKDYEDQQKQLEQVIA-- 64 usage_00529.pdb 45 DLKDYEDQQKQLEQVI--- 60 usage_00530.pdb 37 DLKDYEDQQKQLEQV---- 51 usage_01101.pdb 44 DLKDYEDQQKQLEQVIA-- 60 usage_01102.pdb 46 DLKDYEDQQKQLEQVIAK- 63 usage_01116.pdb 48 DLKDYEDQQKQLEQV---- 62 usage_01118.pdb 48 DLKDYEDQQKQLEQVIA-- 64 usage_01119.pdb 42 DLKDYEDQQKQLEQV---- 56 usage_01192.pdb 61 DLKDYEDQQKQLEQVI--- 76 usage_01193.pdb 61 DLKDYEDQQKQLEQVI--- 76 usage_01194.pdb 57 DLKDYEDQQKQLEQV---- 71 usage_01195.pdb 57 DLKDYEDQQKQLEQV---- 71 usage_01196.pdb 59 DLKDYEDQQKQLEQVI--- 74 usage_01197.pdb 60 DLKDYEDQQKQLEQVI--- 75 usage_01221.pdb 48 DLKDYEDQQKQLEQVI--- 63 usage_01222.pdb 42 DLKDYEDQQKQLEQ----- 55 usage_01299.pdb 42 DLKDYEDQQKQLEQVIA-- 58 usage_01300.pdb 45 DLKDYEDQQKQLEQVI--- 60 usage_01535.pdb 49 DLKDYEDQQKQLEQVI--- 64 usage_01536.pdb 45 DLKDYEDQQKQLEQVI--- 60 usage_01627.pdb 45 DLKDYEDQQKQLEQVIAKD 63 usage_01628.pdb 40 DLKDYEDQQKQLEQ----- 53 usage_01634.pdb 54 DLKDYEDQQKQLEQVI--- 69 usage_01640.pdb 53 DLKDYEDQQKQLEQVIAK- 70 usage_01641.pdb 61 DLKDYEDQQKQLEQVIAK- 78 usage_01997.pdb 56 DLKDYEDQQKQLEQVI--- 71 usage_01998.pdb 59 DLKDYEDQQKQLEQVIA-- 75 usage_01999.pdb 51 DLKDYEDQQKQLEQVI--- 66 usage_02446.pdb 46 DLKDYEDQQKQLEQVI--- 61 usage_02447.pdb 39 DLKDYEDQQKQLEQV---- 53 usage_02489.pdb 47 DLKDYEDQQKQLEQVIA-- 63 usage_02490.pdb 42 DLKDYEDQQKQLEQV---- 56 usage_02492.pdb 42 DLKDYEDQQKQLEQVIA-- 58 usage_03213.pdb 45 DLKDYEDQQKQLEQVI--- 60 usage_03214.pdb 46 DLKDYEDQQKQLE------ 58 usage_04342.pdb 48 DLKDYEDQQKQLEQVIA-- 64 usage_04343.pdb 45 DLKDYEDQQKQLE------ 57 usage_04348.pdb 56 DLKDYEDQQKQLEQVIAKD 74 usage_04349.pdb 56 DLKDYEDQQKQLEQVIAKD 74 usage_04350.pdb 45 DLKDYEDQQKQLEQ----- 58 usage_04351.pdb 39 DLKDYEDQQKQLE------ 51 usage_04352.pdb 45 DLKDYEDQQKQLEQ----- 58 DLKDYEDQQKQLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################