################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:39 2021 # Report_file: c_1319_135.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00036.pdb # 2: usage_00087.pdb # 3: usage_00307.pdb # 4: usage_00373.pdb # 5: usage_00374.pdb # 6: usage_00971.pdb # 7: usage_01047.pdb # 8: usage_01193.pdb # 9: usage_01375.pdb # 10: usage_01381.pdb # 11: usage_01569.pdb # 12: usage_01570.pdb # 13: usage_01571.pdb # 14: usage_01572.pdb # 15: usage_01792.pdb # 16: usage_01796.pdb # 17: usage_01847.pdb # 18: usage_01926.pdb # 19: usage_01927.pdb # 20: usage_01928.pdb # 21: usage_02011.pdb # 22: usage_02286.pdb # 23: usage_02287.pdb # 24: usage_02288.pdb # 25: usage_02357.pdb # 26: usage_02396.pdb # # Length: 46 # Identity: 1/ 46 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 46 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 46 ( 56.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_00087.pdb 1 ---------LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVME---- 33 usage_00307.pdb 1 -SLRERIEFLNEASVMKGFTCHHVVRLLGVVSPT--LVVME----- 38 usage_00373.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_00374.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_00971.pdb 1 -SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVME---- 41 usage_01047.pdb 1 -SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVME---- 41 usage_01193.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01375.pdb 1 --MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 40 usage_01381.pdb 1 GPRKALDYMYEIAHRDG--------FTTHDV-DHIAGRIE------ 31 usage_01569.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01570.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01571.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01572.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01792.pdb 1 --MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 40 usage_01796.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01847.pdb 1 -SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 45 usage_01926.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_01927.pdb 1 --MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 40 usage_01928.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_02011.pdb 1 ---RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 39 usage_02286.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_02287.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_02288.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 usage_02357.pdb 1 --MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 40 usage_02396.pdb 1 -SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME---- 41 l eA r gvv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################