################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:56 2021 # Report_file: c_1242_202.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00331.pdb # 2: usage_00332.pdb # 3: usage_00421.pdb # 4: usage_00422.pdb # 5: usage_00964.pdb # 6: usage_00965.pdb # 7: usage_01406.pdb # 8: usage_01497.pdb # 9: usage_01498.pdb # 10: usage_01811.pdb # 11: usage_01812.pdb # 12: usage_01888.pdb # 13: usage_02250.pdb # # Length: 36 # Identity: 6/ 36 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 36 ( 38.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 36 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00331.pdb 1 -IL-YTHPANNMILKGITRDVVIACANEINMPVKEI 34 usage_00332.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKE- 34 usage_00421.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKEI 35 usage_00422.pdb 1 -IL-YTHPANNMIAKGITRDVVIACANEINMPVKEI 34 usage_00964.pdb 1 -VL-FTPPFTSSALPGITRDAIIKLAKELGIEVREQ 34 usage_00965.pdb 1 -VL-FTPPFTSSALPGITRDAIIKLAKELGIEVREQ 34 usage_01406.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKE- 34 usage_01497.pdb 1 -IL-YTHPANNMILKGITRDVVIACANEINMPVKEI 34 usage_01498.pdb 1 -IL-YTHPANNMILKGITRDVVIACANEINMPVKE- 33 usage_01811.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKEI 35 usage_01812.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKEI 35 usage_01888.pdb 1 GIL-YTHPANNMILKGITRDVVIACANEINMPVKEI 35 usage_02250.pdb 1 -VVFTPAA-NRTFLAGITRSRVGLLSEA-GFEVIET 33 l t p l GITRd i a e V E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################