################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:19 2021 # Report_file: c_0147_36.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00008.pdb # 2: usage_00068.pdb # 3: usage_00104.pdb # 4: usage_00434.pdb # 5: usage_00435.pdb # 6: usage_00436.pdb # 7: usage_00437.pdb # 8: usage_00438.pdb # 9: usage_00665.pdb # # Length: 120 # Identity: 54/120 ( 45.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/120 ( 57.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/120 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 EVKLSESGPGLVKPSQSLSLTCTVTGYSITTNYAWTWIRQFPGNKLEWMGYIRSSVITRY 60 usage_00068.pdb 1 DVQLQESGPGLVKPSQSLSLTCTVTGYSITSLYAWNWIRQFPGNKLEWMGYINYSGYTSY 60 usage_00104.pdb 1 EVQLQESGPSLVKPSQTLSLTCSVTGDS-VTSGYWSWIRQFPGNKLDYMGYISYRGSTYY 59 usage_00434.pdb 1 -VQLQESGPGLVKPSDTLSLTCAVSGYSITGGYSWHWIRQPPGKGLEWMGYIHYSGYTDF 59 usage_00435.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPIRFGYSWHWIRQPPGKGLEWMGYIHYSGYTDF 60 usage_00436.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPIRFGYSWHWIRQPPGKGLEWMGYIHYSGYTDF 60 usage_00437.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPIRFGYSWHWIRQPPGKGLEWMGYIHYSGYTDF 60 usage_00438.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPIRFGYSWHWIRQPPGKGLEWMGYIHYSGYTDF 60 usage_00665.pdb 1 EVQLQESGPSLVKPSQTLSLTCSVTGDS-VTSGYWSWIRQFPGNKLDYMGYISYRGSTYY 59 VqLqESGP LVKPS LSLTC V G W WIRQ PG L MGYI y g T usage_00008.pdb 61 NPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYDYYG---NTGDYWGQGTSVTV 117 usage_00068.pdb 61 NPSLKSRISITRDTSKNQFFLQLHSVTTEDTATYSCTRGVDYF---AMDYWGQGASVTVS 117 usage_00104.pdb 60 NPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDS--DDYAMEYWGQGTSVTV- 116 usage_00434.pdb 60 NPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDPSD---AFPYWGQGTLVTV- 115 usage_00435.pdb 61 NPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDSGN---YFPYWGQGTLVTV- 116 usage_00436.pdb 61 NPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDSGN---YFPYWGQGTLVTV- 116 usage_00437.pdb 61 NPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDSGN---YFPYWGQGTLVTV- 116 usage_00438.pdb 61 NPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDSGN---YFPYWGQGTLVTV- 116 usage_00665.pdb 60 NPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDS--DDYAMEYWGQGTSVTV- 116 NPSLK RI I rDTSKNQ L L SV DTA YyC d ywgqg vtv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################