################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:04 2021 # Report_file: c_0039_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00032.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00067.pdb # 6: usage_00074.pdb # 7: usage_00075.pdb # # Length: 256 # Identity: 34/256 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/256 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/256 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 -LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSY 59 usage_00044.pdb 1 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSY 60 usage_00045.pdb 1 -LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSY 59 usage_00046.pdb 1 -LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSY 59 usage_00067.pdb 1 LLALRQAASAFVKEKYHLTYNPDNEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGY 60 usage_00074.pdb 1 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSY 60 usage_00075.pdb 1 -LELREKISELYKDKYKADIIP-DNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCY 58 l LR ai k P ei v Ga a l G eVL P Y usage_00032.pdb 60 APAVILAGGKPVEVPTY--EED--EFRLNVDELKKYV---TDKTRALIINSPCNPTGAVL 112 usage_00044.pdb 61 APAVILAGGKPVEVPTY--EED--EFRLNVDELKKYV---TDKTRALIINSPCNPTGAVL 113 usage_00045.pdb 60 APAVILAGGKPVEVPTY--EED--EFRLNVDELKKYV---TDKTRALIINSPCNPTGAVL 112 usage_00046.pdb 60 APAVILAGGKPVEVPTY--EED--EFRLNVDELKKYV---TDKTRALIINSPCNPTGAVL 112 usage_00067.pdb 61 EPVVNLVGAEVVEIDTRSN-----DFVLTPEMLEEAILKEGEALKAVILNYPTNPTGVTY 115 usage_00074.pdb 61 SPVVAMAGAHRVTVPLV--PD-GRGFALDADALRRAV---TPRTRALIINSPHNPTGAVL 114 usage_00075.pdb 59 KNFIRFLGAKPVFCD------------FTVESLEEAL---SDKTKAIIINSPSNPLGEVI 103 p v G V l L t A IiNsP NPtG v usage_00032.pdb 113 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTF 170 usage_00044.pdb 114 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTF 171 usage_00045.pdb 113 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTF 170 usage_00046.pdb 113 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTF 170 usage_00067.pdb 116 SRQQIKNLAEVLKKYPIFVISDEVYAELTYTGESHVSIAEY--L--PDQTILISGLSKSH 171 usage_00074.pdb 115 SATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGM--AERTITISSAA-MF 171 usage_00075.pdb 104 DREIYEFAYENI----PYIISDEIYNGLVYE-GKCYSAIEFD--ENLEKTILINGFS-LY 155 a vIsDEvY y h s a e TI g s usage_00032.pdb 171 AMTGWRLGFVAAPSWIIERMVKFQ--MYNATCPVTFIQYAAAKALKDERSWKAVEEMRKE 228 usage_00044.pdb 172 AMTGWRLGFVAAPSWIIERMVKFQ--MYNATCPVTFIQYAAAKALKDERSWKAVEEMRKE 229 usage_00045.pdb 171 AMTGWRLGFVAAPSWIIERMVKFQ--MYNATCPVTFIQYAAAKALKDERSWKAVEEMRKE 228 usage_00046.pdb 171 AMTGWRLGFVAAPSWIIERMVKFQ--MYNATCPVTFIQYAAAKALKDERSWKAVEEMRKE 228 usage_00067.pdb 172 AMTGWRLGLIFAPAVLTAQLIKSHQY--LVTAATTSVQFAAIEALT--NGKDDALPMKEE 227 usage_00074.pdb 172 NCTGWKIGWACGPAELIAGVRAAK--QYLSYVGGAPFQPAVALALD--TEDAWVAALRNS 227 usage_00075.pdb 156 AMTGWRIGYVISNDEIIEAILKLQ--QNLFISAPTISQYAALKAFE-KETEREINSMIKE 212 amTGWr G p i k t Q Aa Al m e usage_00032.pdb 229 YDRRRKLVWKRLNEMG 244 usage_00044.pdb 230 YDRRRKLVWKRLNEMG 245 usage_00045.pdb 229 YDRRRKLVWKRLNEMG 244 usage_00046.pdb 229 YDRRRKLVWKRLNEMG 244 usage_00067.pdb 228 YIKRRDYIIEKMEAMK 243 usage_00074.pdb 228 LRARRDRLAAGLTEIG 243 usage_00075.pdb 213 FDRRRRLVLKYVKDFG 228 RR g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################