################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:14 2021 # Report_file: c_1200_511.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_01930.pdb # 2: usage_03191.pdb # 3: usage_04802.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 62 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 62 ( 66.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01930.pdb 1 EIISDDGDYEKPN-----VSFIFYQPVTIG------KAKARFHGRV-----------TQP 38 usage_03191.pdb 1 EIISDDGDYEKPNVKWNEVSFIFYQPVTIG------KAKARFHGRV-----------TQP 43 usage_04802.pdb 1 -------------------TPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIV--- 38 sfIfyqpvtiG kakarfhgrv usage_01930.pdb -- usage_03191.pdb 44 LK 45 usage_04802.pdb 39 SR 40 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################