################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:21 2021 # Report_file: c_1135_90.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00057.pdb # 2: usage_00058.pdb # 3: usage_00936.pdb # 4: usage_01348.pdb # 5: usage_01349.pdb # # Length: 141 # Identity: 107/141 ( 75.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 112/141 ( 79.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/141 ( 2.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 DSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERA 60 usage_00058.pdb 1 DSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERA 60 usage_00936.pdb 1 DSLCYPIRLAYHYWKTTGDASIFSDEWLTAIAKVLKTFKEQQRKEDPKGPYRFQRKTERA 60 usage_01348.pdb 1 DSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDG-VGPYKFQRKTERA 59 usage_01349.pdb 1 DSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDG-VGPYKFQRKTERA 59 DSLCYP RLAYHYWKTTGDAS F EW qAI nVLKTFKEQQRKd GPY FQRKTERA usage_00057.pdb 61 LDT-TNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKP 119 usage_00058.pdb 61 LDT-TNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKP 119 usage_00936.pdb 61 LDT-TNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNKKP 119 usage_01348.pdb 60 LDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKT 119 usage_01349.pdb 60 LDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKT 119 LDT NDG G PVKPVGLI S FRPSDDATT QFLVPSNFFAV SLRKAAEIL VN K usage_00057.pdb 120 ALAKECTALADEVEKALKKYA 140 usage_00058.pdb 120 ALAKECTALADEVEKALKKYA 140 usage_00936.pdb 120 DLAKECTTLSNEVEAALKK-- 138 usage_01348.pdb 120 ALSKECKDLAQEVETALKK-- 138 usage_01349.pdb 120 ALSKECKDLAQEVETALKK-- 138 aL KEC La EVE ALKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################