################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:38 2021 # Report_file: c_1484_160.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00224.pdb # 2: usage_01355.pdb # 3: usage_01356.pdb # 4: usage_01357.pdb # 5: usage_01358.pdb # 6: usage_01359.pdb # 7: usage_01360.pdb # 8: usage_01546.pdb # 9: usage_01882.pdb # 10: usage_02921.pdb # 11: usage_03237.pdb # 12: usage_03957.pdb # 13: usage_04042.pdb # 14: usage_04295.pdb # 15: usage_04725.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 63 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 63 ( 88.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 -------------LEE--VA-VA-LHIRKDFYQ----AETNIVLNQFKNSSDLISRL--- 36 usage_01355.pdb 1 --PEKSKLQEIYQELT--QL---------------KQQ-Q--IYQELTDLKTAFER---- 34 usage_01356.pdb 1 --PEKSKLQEIYQELT--QL---------------KQQ-Q--IYQELTDLKTAFER---- 34 usage_01357.pdb 1 ---EKSKLQEIYQELT--QL---------------KQQ-Q--IYQELTDLKTAFE----- 32 usage_01358.pdb 1 PE--KSKLQEIYQELT--QL-KA-A--------------Q--IYQELTDLKTAFERL--- 35 usage_01359.pdb 1 -------LQEIYQELT--QL-KA-A--------------Q--IYQELTDLKTAFERL--- 30 usage_01360.pdb 1 PE--KSKLQEIYQELT--QL-KA-A--------------Q--IYQELTDLKTAFERL--- 35 usage_01546.pdb 1 -------D-----EYK--YI-RD-LGRIF---N----RNE--AERLIQEQQSVAYTVAQT 35 usage_01882.pdb 1 --------------MS--HL-RA-FYEFT---G----DKT--WLTVINNLYDVYTQFSNK 33 usage_02921.pdb 1 ------AVKVLLKLDF----RR-RPQIFK---PADDLE-F--YNKF-------------- 29 usage_03237.pdb 1 ------GRTEARMLLE--NR-LR-NLRRN---G---QS-Q--EYDQLQSVFQRT------ 35 usage_03957.pdb 1 -------KAAILEYLPPD------DASIR---K----T-V--LYKT---LFDGFTKI--- 31 usage_04042.pdb 1 ------DVK----GKL--DE-WL-NALVH---L---DK-Q--QVERIYEELQGEM----- 32 usage_04295.pdb 1 --------KQVYRNLTT---------------V----T-A--ADLD---TVKRNFAW--- 24 usage_04725.pdb 1 --------RTDFDQVR--SL-----MENS---D---RC-Q--DIRNLAFLGIAYNTL--- 33 usage_00224.pdb --- usage_01355.pdb --- usage_01356.pdb --- usage_01357.pdb --- usage_01358.pdb --- usage_01359.pdb --- usage_01360.pdb --- usage_01546.pdb --- usage_01882.pdb --- usage_02921.pdb --- usage_03237.pdb --- usage_03957.pdb --- usage_04042.pdb --- usage_04295.pdb 25 VKD 27 usage_04725.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################