################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:14 2021 # Report_file: c_1487_403.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00011.pdb # 2: usage_00933.pdb # 3: usage_00937.pdb # 4: usage_01662.pdb # 5: usage_01663.pdb # 6: usage_03505.pdb # 7: usage_03506.pdb # 8: usage_04491.pdb # 9: usage_04492.pdb # 10: usage_04861.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 72 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/ 72 ( 83.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -KEFSWAQEYFDFGESEF--IEV---------------AKIASVLKETI----------- 31 usage_00933.pdb 1 -------E----------NSKAIFWKEGEPLKKGDTLV---QANLAKSLEMIAE------ 34 usage_00937.pdb 1 -EKAFRWL----------HNEDQ---------------MAVEKLSDGIRKFAADAIKLER 34 usage_01662.pdb 1 TESEFLWQ----------HNQDP---------------MAVDKLAEGIRKFAIDQEKLEK 35 usage_01663.pdb 1 TESEFLWQ----------HNQDP---------------MAVDKLAEGIRKFAIDQEKLEK 35 usage_03505.pdb 1 -EPHFRYV----------LNEDQ---------------MATEKLSDGIRKFSADIEALYK 34 usage_03506.pdb 1 -EPHFRYV----------LNEDQ---------------MATEKLSDGIRKFSADIEALYK 34 usage_04491.pdb 1 -EKSFRWL----------HNEDQ---------------MAVEKLSDGIRKFAADAVKLER 34 usage_04492.pdb 1 -EKSFRWL----------HNEDQ---------------MAVEKLSDGIRKFAADAVKLER 34 usage_04861.pdb 1 TESEFLWQ----------HNQDP---------------MAVDKLAEGIRKFAIDQEKLEK 35 usage_00011.pdb ------------ usage_00933.pdb ------------ usage_00937.pdb 35 MLTERMF----- 41 usage_01662.pdb 36 MIGDLL------ 41 usage_01663.pdb 36 MIGDLL------ 41 usage_03505.pdb 35 LVEEKMLEHHHH 46 usage_03506.pdb 35 LVEEKMLEHHH- 45 usage_04491.pdb 35 MLTERMFN---- 42 usage_04492.pdb 35 MLTERM------ 40 usage_04861.pdb 36 MIGDLL------ 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################