################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:31 2021 # Report_file: c_0118_23.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00008.pdb # 2: usage_00106.pdb # 3: usage_00111.pdb # 4: usage_00121.pdb # 5: usage_00250.pdb # 6: usage_00306.pdb # 7: usage_00342.pdb # 8: usage_00373.pdb # 9: usage_00374.pdb # 10: usage_00375.pdb # 11: usage_00376.pdb # 12: usage_00377.pdb # 13: usage_00383.pdb # 14: usage_00564.pdb # 15: usage_00565.pdb # # Length: 145 # Identity: 36/145 ( 24.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/145 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/145 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 QVKLQESGPAVIKPSQSLSLTCIVSGFSITR------TNYCWHWIRQAPGKGLEWMGRIC 54 usage_00106.pdb 1 QVQLQESGPGVVKSSETLSLTCTVSGGSM-G-------GTYWSWLRLSPGKGLEWIGYIF 52 usage_00111.pdb 1 --QLQESGPGLVKPSQTLSLSCTVSGGSSSS------GAHYWSWIRQYPGKGLEWIGYIH 52 usage_00121.pdb 1 QLQMQESGPGLVKPSETLSLSCTVSGDSI-RGGEWGDKDYHWGWVRHSAGKGLEWIGSIH 59 usage_00250.pdb 1 QVQLQESGPGLVKPSETLSLTCVVSGGSF-S-------SYYWTWIRQSPGKGLEWIGEMN 52 usage_00306.pdb 1 QVQLQESGPGLVKPSETLSVTCAVSGVSF-S-------SFWWGWIRQSPGKGLEWIGTIY 52 usage_00342.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGGSI-S-------SYYWSWIRQPPGKGLEWIGYIY 51 usage_00373.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYSI-T------GGYSWHWIRQPPGKGLEWMGYIH 53 usage_00374.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYSI-T------GGYSWHWIRQPPGKGLEWMGYIH 53 usage_00375.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPI-R------FGYSWHWIRQPPGKGLEWMGYIH 53 usage_00376.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPI-R------FGYSWHWIRQPPGKGLEWMGYIH 53 usage_00377.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYPI-R------FGYSWHWIRQPPGKGLEWMGYIH 53 usage_00383.pdb 1 --QLVESGPGLVKPLETLSLTCAVPGGSI-R-------RNYWSWIRQPPGKGLEWIGHSY 50 usage_00564.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S-------SYYWSWIRQPPGKGLEWIGYIY 50 usage_00565.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S-------SYYWSWIRQPPGKGLEWIGYIY 50 qlqESGPg vKps tLSl C VsG W W R pGKGLEW G usage_00008.pdb 55 Y-EGSIYYSPSIKSRSTISRDTSLNKFFIQLISVTNEDTAMYYCSRENH-M--------- 103 usage_00106.pdb 53 H-TGETNYSPSLKGRVSISVDTSEDQFSLRLRSVTAADTAVYFCASLPR-GQL------- 103 usage_00111.pdb 53 Y-SGNTYYNPSLKSRITISQHTSENQFSLKLNSVTVADTAVYYCARGTR-LR-------- 102 usage_00121.pdb 60 W-RGTTHYKESLRRRVSMSIDTSRNWFSLRLASVTAADTAVYFCARHRH-H----DVF-- 111 usage_00250.pdb 53 GNSGYTNYNPSLQSRVTISK---KNQFSLKLTSLTAADTAVYYCARDAIVM--------- 100 usage_00306.pdb 53 GSSGRGEYNPSLKSRTTISR----SQISLELTSVTAADTAIYYCSRGLF-QP-NG-F--- 102 usage_00342.pdb 52 Y-SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASLPR-GQ-------- 101 usage_00373.pdb 54 Y-SGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDP----------- 101 usage_00374.pdb 54 Y-SGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDP----------- 101 usage_00375.pdb 54 Y-SGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDS----------- 101 usage_00376.pdb 54 Y-SGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDS----------- 101 usage_00377.pdb 54 Y-SGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDS----------- 101 usage_00383.pdb 51 GSGGSTNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTVW-YY-T------ 102 usage_00564.pdb 51 Y-SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTQQ-GK-RIYGVVS 107 usage_00565.pdb 51 Y-SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTQQ-GK-RIYGV-- 105 G pSl R S fsl L SvT DTA Y C usage_00008.pdb 104 --------YETYFDVWGQGTTVTV- 119 usage_00106.pdb 104 ----V----NAYFRNWGRGSLVS-- 118 usage_00111.pdb 103 -------TLRNAFDIWGQGTMVTVS 120 usage_00121.pdb 112 M--LVPI--AGWFDVWGPGVQVT-- 130 usage_00250.pdb 101 VF-T-D-M-RGRVDVWGPGILVTVS 121 usage_00306.pdb 103 SF-TLT---SYWFDVWGPGVPVTVS 123 usage_00342.pdb 102 ----LV---NAYFDYWGQGTLVTVS 119 usage_00373.pdb 102 ---------SDAFPYWGQGTLVTV- 116 usage_00374.pdb 102 ---------SDAFPYWGQGTLVTV- 116 usage_00375.pdb 102 ---------GNYFPYWGQGTLVTV- 116 usage_00376.pdb 102 ---------GNYFPYWGQGTLVTV- 116 usage_00377.pdb 102 ---------GNYFPYWGQGTLVTV- 116 usage_00383.pdb 103 ----SG---THYFDHWGQGVLVTV- 119 usage_00564.pdb 108 FGDYYY---YYYMDVWGKGTTVTVS 129 usage_00565.pdb 106 FGDYYY---YYYMDVWGKGTTVTVS 127 WG G Vt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################