################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:41 2021 # Report_file: c_0024_21.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00359.pdb # 2: usage_00360.pdb # 3: usage_00361.pdb # # Length: 239 # Identity: 219/239 ( 91.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 219/239 ( 91.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/239 ( 8.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00359.pdb 1 SQEQVDKIFRAASLAANQARIPLAQQAVEESGGIVEDKVIKNHFASEFIYNKYKDEQTCG 60 usage_00360.pdb 1 --EQVDKIFRAASLAANQARIPLAQQAVEESGGIVEDKVIKNHFASEFIYNKYKDEQTCG 58 usage_00361.pdb 1 SQEQVDKIFRAASLAANQARIPLAQQAVEESGGIVEDKVIKNHFASEFIYNKYKDEQTCG 60 EQVDKIFRAASLAANQARIPLAQQAVEESGGIVEDKVIKNHFASEFIYNKYKDEQTCG usage_00359.pdb 61 ILEEDDNLGTTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTND 120 usage_00360.pdb 59 ILEEDD--GTTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTND 116 usage_00361.pdb 61 ILEEDDNLGTTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTND 120 ILEEDD GTTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTND usage_00359.pdb 121 AAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALKHDDIALILATGGPGVKAAYSSGKPAI 180 usage_00360.pdb 117 AAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALKHDDIALILATGGPGVKAAYSSGKPAI 176 usage_00361.pdb 121 AAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALKHDDIALILAT---GVKAAYSSGKPAI 177 AAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALKHDDIALILAT GVKAAYSSGKPAI usage_00359.pdb 181 GV--GNVPVVIDETADIKRAVASVLSKTFDNGVVCASEQAVIVVDEVY----------- 226 usage_00360.pdb 177 GVGAGNVPVVIDETADIKRAVASVLSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHK 235 usage_00361.pdb 178 GV-AGNVPVVIDETADIKRAVASVLSKTFDNGVVCASEQAVIVVDEVY----------- 224 GV GNVPVVIDETADIKRAVASVLSKTFDNGVVCASEQAVIVVDEVY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################