################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:26:42 2021 # Report_file: c_1267_121.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00012.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00061.pdb # 5: usage_00344.pdb # 6: usage_00543.pdb # 7: usage_00598.pdb # 8: usage_00599.pdb # 9: usage_00656.pdb # 10: usage_00657.pdb # 11: usage_00658.pdb # 12: usage_00659.pdb # 13: usage_00668.pdb # 14: usage_00710.pdb # 15: usage_00711.pdb # 16: usage_00898.pdb # 17: usage_00966.pdb # 18: usage_01017.pdb # 19: usage_01196.pdb # 20: usage_01197.pdb # 21: usage_01198.pdb # 22: usage_01199.pdb # 23: usage_01200.pdb # 24: usage_01201.pdb # 25: usage_01202.pdb # 26: usage_01219.pdb # 27: usage_01389.pdb # 28: usage_01591.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 54 ( 1.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 54 ( 74.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00035.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_00036.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00061.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00344.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00543.pdb 1 ------PFLTKPGKLLDSITS------AIEETIG-----------ITPKAET-- 29 usage_00598.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTII 29 usage_00599.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTII 29 usage_00656.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00657.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00658.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00659.pdb 1 PKSSPSVTLFPP--------S------SEELETN-----------KATLVCTIT 29 usage_00668.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_00710.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_00711.pdb 1 -----SVTLFPP--------S------SEELATN-----------TATLVCTIT 24 usage_00898.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_00966.pdb 1 -YTSRFSKHVDM--------SPDFTPTLNTDDAY-----------ASSET---- 30 usage_01017.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01196.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01197.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01198.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01199.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01200.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01201.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01202.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01219.pdb 1 ----------RA--------E------LHAVRQLKSYVEILREEYGDK-VRGIL 29 usage_01389.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 usage_01591.pdb 1 -----SVTLFPP--------S------SEELETN-----------KATLVCTIT 24 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################