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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:18:39 2021
# Report_file: c_1336_79.html
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#====================================
# Aligned_structures: 5
#   1: usage_00396.pdb
#   2: usage_00397.pdb
#   3: usage_00398.pdb
#   4: usage_00399.pdb
#   5: usage_00812.pdb
#
# Length:         57
# Identity:        3/ 57 (  5.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     28/ 57 ( 49.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/ 57 ( 50.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00396.pdb         1  ----------GAAFGSSGE-RCMALSVAVAVGD-------AAGDALVSKMTQAMQKL   39
usage_00397.pdb         1  DMDNAVNQLLGAAFGSSGE-RCMALSVAVAVGD-------AAGDALVSKMTQAM---   46
usage_00398.pdb         1  -MDNAVNQLLGAAFGSSGE-RCMALSVAVAVGD-------AAGDALVSKMTQAMQKL   48
usage_00399.pdb         1  --DNAVNQLLGAAFGSSGE-RCMALSVAVAVGD-------AAGDALVSKMTQAMQ--   45
usage_00812.pdb         1  TRSSLAEDLRAIG------LADGDAVLVHAAL-RKVGKIVGGPDDILDAMRDV----   46
                                     gaa       rcmalsvavAvg        aagDalvskMtqa    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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