################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:54 2021 # Report_file: c_0877_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00016.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00070.pdb # 5: usage_00071.pdb # 6: usage_00072.pdb # 7: usage_00073.pdb # 8: usage_00090.pdb # 9: usage_00164.pdb # 10: usage_00165.pdb # 11: usage_00233.pdb # 12: usage_00234.pdb # # Length: 96 # Identity: 35/ 96 ( 36.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/ 96 ( 90.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 96 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00018.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00019.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00070.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00071.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00072.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00073.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00090.pdb 1 APERFSE---Y-RADIYALTCVLYECLTGSPPYQGD-QLS-VGAHINQAIPRPSTVRPGI 54 usage_00164.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00165.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00233.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 usage_00234.pdb 1 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 60 sPEqarg d RsDvYsLgCVLYEvLTGePPftGD pvS ayqHvredpipPSarheGl usage_00016.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN- 95 usage_00018.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 96 usage_00019.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 96 usage_00070.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH-- 94 usage_00071.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN- 95 usage_00072.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH-- 94 usage_00073.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH-- 94 usage_00090.pdb 55 PVAFDAVIARG-AKNPEDRYVTCGDLSAAAHAAL-- 87 usage_00164.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN- 95 usage_00165.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH-- 94 usage_00233.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 96 usage_00234.pdb 61 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 96 sadlDAVvlka AKNPEnRYqTaaemrAdlvrvh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################