################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:44 2021 # Report_file: c_0293_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00158.pdb # 2: usage_00194.pdb # 3: usage_00308.pdb # 4: usage_00309.pdb # 5: usage_00310.pdb # # Length: 139 # Identity: 111/139 ( 79.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/139 ( 86.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/139 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00158.pdb 1 GQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKN 57 usage_00194.pdb 1 -QVYKGRHVKTGQLAAIKVMDVT-------E-IKLEINMLKKYSHHRNIATYYGAFIKKS 51 usage_00308.pdb 1 GQVYKGRHVKTGQLAAIKVMDVTE--DEEEE-IKLEINMLKKYSHHRNIATYYGAFIKKS 57 usage_00309.pdb 1 ---YKGRHVKTGQLAAIKVMDVTE-----EE-IKLEINMLKKYSHHRNIATYYGAFIKKS 51 usage_00310.pdb 1 -QVYKGRHVKTGQLAAIKVMDVT-------E-IKLEINMLKKYSHHRNIATYYGAFIKKS 51 YKGRHVKTGQLAAIKVMDVT E IKlEINMLKKYSHHRNIATYYGAFIKKs usage_00158.pdb 58 PPGM-DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR 116 usage_00194.pdb 52 -----DDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHR 106 usage_00308.pdb 58 PPGH-DDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHR 116 usage_00309.pdb 52 P---P-DQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHR 107 usage_00310.pdb 52 -----DDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHR 106 DQLWLVMEFCGAGSiTDLvKNTKGNTLKEdWIAYIsREILRGLaHLHiHhVIHR usage_00158.pdb 117 DIKGQNVLLTENAEVKLV- 134 usage_00194.pdb 107 DIKGQNVLLTENAEVKLVD 125 usage_00308.pdb 117 DIKGQNVLLTENAEVKL-- 133 usage_00309.pdb 108 DIKGQNVLLTENAEVKL-- 124 usage_00310.pdb 107 DIKGQNVLLTENAEVKLVD 125 DIKGQNVLLTENAEVKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################