################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:19:57 2021 # Report_file: c_0116_8.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00014.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00046.pdb # 7: usage_00092.pdb # 8: usage_00093.pdb # 9: usage_00094.pdb # 10: usage_00133.pdb # 11: usage_00159.pdb # 12: usage_00183.pdb # 13: usage_00187.pdb # 14: usage_00188.pdb # 15: usage_00189.pdb # 16: usage_00190.pdb # 17: usage_00193.pdb # 18: usage_00210.pdb # 19: usage_00212.pdb # 20: usage_00213.pdb # # Length: 119 # Identity: 46/119 ( 38.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/119 ( 56.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/119 ( 16.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --VLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 53 usage_00008.pdb 1 --VLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 53 usage_00014.pdb 1 --VLTQSPATLSLSPGERATISCRASQSVG-----G-YLTWYQQKPGQAPRLLIYDASNR 52 usage_00030.pdb 1 -AELTQSPATLSLSPGERATLSCRASQSVN-----K-YLAWYQQKPGQAPRLLIYDASNR 53 usage_00031.pdb 1 -AELTQSPATLSLSPGERATLSCRASQSVN-----K-YLAWYQQKPGQAPRLLIYDASNR 53 usage_00046.pdb 1 --VLTQSPATLSLSPGERATISCRASESVDSY-GHS-FMQWYQQKPGQAPRLLIYRASNL 56 usage_00092.pdb 1 --VLTQSPATLSLSPGERATLSCRASKSIS-----K-YLAWYQQKPGQAPRLLIYSGSTL 52 usage_00093.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKSIS-----K-YLAWYQQKPGQAPRLLIYSGSTL 54 usage_00094.pdb 1 --VLTQSPATLSLSPGERATLSCRASKSIS-----K-YLAWYQQKPGQAPRLLIYSGSTL 52 usage_00133.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS-D---A-YLAWYQQKPGQAPRLLIYDASSR 54 usage_00159.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSVS-----SSYLAWYQQKPGQAPRLLIYGASSR 55 usage_00183.pdb 1 ELELTQSPATLSVSPGERATLSCRASESVS-----S-DLAWYQQKPGQAPRLLIYGASTR 54 usage_00187.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 54 usage_00188.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 54 usage_00189.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 54 usage_00190.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG-S---S-YLAWYQQKPGQAPRLLIYGASSR 54 usage_00193.pdb 1 -IVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKT-YLYWYLQKPGQSPQLLIYEVSNR 58 usage_00210.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS-S---N-YLAWYQQKPGQAPRLLIYDSSSR 53 usage_00212.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS-----S-YLAWYQQKPGQAPRLLIYDASNR 53 usage_00213.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS-----S-YLAWYQQKPGQAPRLLIYDASNR 53 lTQsP tLS sPGerAt SCraS S l WYqQKPGQaPrLLIY S usage_00007.pdb 54 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 105 usage_00008.pdb 54 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 105 usage_00014.pdb 53 ATGIPARFSGSGSGTDFTLTISGLEPEDFAIYYCQQRGN--WPPITFGQ-GTRLEI--- 105 usage_00030.pdb 54 ATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQQRSD--WVTFGGGT-K-VEI---- 104 usage_00031.pdb 54 ATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQQRSD--WVTFGGGT-K-VEIK--- 105 usage_00046.pdb 57 EPGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQSNE--APFTFGQG-T-KVEIKRT 111 usage_00092.pdb 53 QSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHNE--YPYTFGQG-T-KLEI--- 104 usage_00093.pdb 55 QSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHNE--YPYTFGQG-T-KLEI--- 106 usage_00094.pdb 53 QSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHNE--YPYTFGQG-T-KLEIKRT 107 usage_00133.pdb 55 ATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYIQ--LHSFTFGQGT-KVEIKRT 110 usage_00159.pdb 56 ATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQF------EFFGLG-S-ELEV--- 103 usage_00183.pdb 55 ATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQG-T-RLEI--- 108 usage_00187.pdb 55 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 106 usage_00188.pdb 55 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 106 usage_00189.pdb 55 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 106 usage_00190.pdb 55 APGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAD--SPITFGQG-T-RLEI--- 106 usage_00193.pdb 59 LSGVPDRFSGSGSGTDFTLKISRVETEDVGVYYCMQSIQ--VPLYTFGQ-G-TRLEI-- 111 usage_00210.pdb 54 ATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSD--ISPTFGQG-T-KVE---- 104 usage_00212.pdb 54 ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN--WPLTFGQG-T-KVEI--- 105 usage_00213.pdb 54 ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN--WPLTFGQG-T-KVEIKRT 108 G P RFSGSGSGtdFTLtIS le EDfavYYC Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################