################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:06 2021 # Report_file: c_0581_54.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00036.pdb # 2: usage_00439.pdb # 3: usage_00456.pdb # 4: usage_00457.pdb # # Length: 113 # Identity: 16/113 ( 14.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/113 ( 31.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/113 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 NV--GILIDLDYF-----KLVG---------QTGDRILQLVAETITSHLRRSDVVGRYDG 44 usage_00439.pdb 1 ----LSLLMIDAD---------HAFNDRHGHQAGDQALRELARVITT---A-DLVARYGG 43 usage_00456.pdb 1 --QWVVLMFLDLDNDSL------------GHAAGDRMLQEVATRLSACVSQDDTVARMGG 46 usage_00457.pdb 1 --QWVVLMFLDLD----RF---------LGHAAGDRMLQEVATRLSACVSQDDTVARMGG 45 L lD d aGDr LqevA D VaR gG usage_00036.pdb 45 DEFVVYLSPVE-PASLRTVAENLRRSIEEESAR--------VPVTASIGVAQG 88 usage_00439.pdb 44 EEFSVILAE-T----DSVGAQQIAEHIRAAVE------------SIGISTWT- 78 usage_00456.pdb 47 DEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVAL- 98 usage_00457.pdb 46 DEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVAL- 97 dEF L A q ae I a tasIgva #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################