################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:03 2021 # Report_file: c_1302_10.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00318.pdb # 2: usage_00355.pdb # 3: usage_00360.pdb # 4: usage_00762.pdb # 5: usage_00838.pdb # 6: usage_00900.pdb # 7: usage_00928.pdb # 8: usage_01098.pdb # 9: usage_01302.pdb # 10: usage_01303.pdb # # Length: 56 # Identity: 1/ 56 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 56 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 56 ( 57.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00318.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 43 usage_00355.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 43 usage_00360.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 43 usage_00762.pdb 1 ---------------AEQILAMADGPSLNKNVKREGLVFKRLDG-----KFSFKAI 36 usage_00838.pdb 1 AAETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 44 usage_00900.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 43 usage_00928.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ASVIH---RDLAARNCLVGENQVIKV- 43 usage_01098.pdb 1 QTQQLLEMCKDVCEA----MEYLES----KQFLH---RDLAARNCLVNDQGVVKV- 44 usage_01302.pdb 1 AAETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 44 usage_01303.pdb 1 -AETLLGMCLDVCEG----MAYLEE----ACVIH---RDLAARNCLVGENQVIKV- 43 mayle v h rdlaarn v Kv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################