################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:14 2021 # Report_file: c_1104_25.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00271.pdb # 2: usage_00343.pdb # 3: usage_00441.pdb # 4: usage_00442.pdb # 5: usage_00493.pdb # 6: usage_00494.pdb # 7: usage_00587.pdb # # Length: 111 # Identity: 96/111 ( 86.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/111 ( 86.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/111 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00271.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKMSAFF-MDCKLSPNERATPD 59 usage_00343.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKMSAFF-MDCKLSPNERATPD 59 usage_00441.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKSA---FFDCKLSPNERATPD 57 usage_00442.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKMSAFF-MDCKLSPNERATPD 59 usage_00493.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKSA---FFDCKLSPNERATPD 57 usage_00494.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKSA---FFDCKLSPNERATPD 57 usage_00587.pdb 1 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKMSAFF-MDCKLSPNERATPD 59 SPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNK DCKLSPNERATPD usage_00271.pdb 60 PDFKVGKSKILVGIMQFIKDVADPTSKIWMHNTKALMNHKIAAIQKLERSN 110 usage_00343.pdb 60 PDFKVGKSKILVGIMQFIKDVADPTSKIWMHNTKALMNHKIAAIQKLERSN 110 usage_00441.pdb 58 PDFKVGKSKILVGI-QFIKDVADPTSKIWHNT-KA-LNHKIAAIQKLERSN 105 usage_00442.pdb 60 PDFKVGKSKILVGIMQFIKDVADPTSKIWMHNTKALMNHKIAAIQKLERSN 110 usage_00493.pdb 58 PDFKVGKSKILVGI-QFIKDVADPTSKIWHNT-KA-LNHKIAAIQKLERS- 104 usage_00494.pdb 58 PDFKVGKSKILVGI-QFIKDVADPTSKIWHNT-KA-LNHKIAAIQKLERSN 105 usage_00587.pdb 60 PDFKVGKSKILVGIMQFIKDVADPTSKIWMHNTKALMNHKIAAIQKLERSN 110 PDFKVGKSKILVGI QFIKDVADPTSKIW KA NHKIAAIQKLERS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################