################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:19 2021 # Report_file: c_1404_32.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00053.pdb # 2: usage_00665.pdb # 3: usage_00666.pdb # 4: usage_00667.pdb # 5: usage_00668.pdb # 6: usage_00669.pdb # 7: usage_00670.pdb # 8: usage_00671.pdb # 9: usage_00672.pdb # 10: usage_00878.pdb # 11: usage_00892.pdb # 12: usage_00893.pdb # 13: usage_00903.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 35 ( 8.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 35 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 -PF---VNEVFAPKFTDLIYSREHAERERLLREY- 30 usage_00665.pdb 1 -PF---ANQIFDPAAVDDYFDGSKQAKDAFWRY-- 29 usage_00666.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYHR 32 usage_00667.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYHR 32 usage_00668.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYHR 32 usage_00669.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYHR 32 usage_00670.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYH- 31 usage_00671.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYH- 31 usage_00672.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYH- 31 usage_00878.pdb 1 -PF---VNEIFNPERVDKFYSQSAAERQRSLLA-- 29 usage_00892.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYH- 31 usage_00893.pdb 1 TPF---ANQIFDPAAVDDYFDGSKQAKDAFWRYH- 31 usage_00903.pdb 1 ---DPFSLDFFD-DPYPDQQTLR------------ 19 n F d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################