################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:04:21 2021 # Report_file: c_0848_59.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00066.pdb # 4: usage_00117.pdb # 5: usage_00118.pdb # 6: usage_00119.pdb # 7: usage_00120.pdb # 8: usage_00140.pdb # 9: usage_00363.pdb # 10: usage_00464.pdb # 11: usage_00465.pdb # 12: usage_00466.pdb # 13: usage_00491.pdb # 14: usage_00520.pdb # 15: usage_00537.pdb # 16: usage_00538.pdb # 17: usage_00609.pdb # 18: usage_00610.pdb # # Length: 66 # Identity: 7/ 66 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 66 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 66 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 VAEVIYPIMQVNNIHYSGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00035.pdb 1 VAEVIYPIMQVNNIHYSGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00066.pdb 1 VAEVIYPIMEVNGWHYSGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00117.pdb 1 -SKLIYPLMQVSDIFYMDLDIALGGMDQRKAHMLARDVAEKL--------G-RKKPVAIH 50 usage_00118.pdb 1 VSQMIYPLMQALDIAHLGVDLAVGGIDQRKIHMLARENLPRL--------G-YSSPVCLH 51 usage_00119.pdb 1 -AKLIYPMMQVADIFYQGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVH 59 usage_00120.pdb 1 FAKLIYPMMQVADIFYQGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVH 60 usage_00140.pdb 1 ------PLMQALDEQFLDVDCQFGGVDQRKIFVLAEENLPSL--------G-YKKRAHLM 45 usage_00363.pdb 1 VAEVIYPIMQVNTSHRLGVDVAVGGMEQRKIHMLARELLP-------------KKVVMIH 47 usage_00464.pdb 1 VAEVIYPIMQVNSAHYRGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00465.pdb 1 VAEVIYPIMQVNSAHYRGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00466.pdb 1 VAEVIYPIMQVNSAHYRGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00491.pdb 1 VAEVIYPIMQVNSIHYMGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00520.pdb 1 VAEVIYPIMQVNTSHYLGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00537.pdb 1 VAEVIYPIMQVNSIHYKGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00538.pdb 1 VAEVIYPIMQVNGCHYLGVDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00609.pdb 1 VAEVIYPIMQVNGIHYVGGDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 usage_00610.pdb 1 VAEVIYPIMQVNGIHYVGGDVAVGGMEQRKIHMLARELLP-------------KKVVCIH 47 P Mq a G QRK h A e k v h usage_00034.pdb 48 NPVLTG 53 usage_00035.pdb 48 NPVLTG 53 usage_00066.pdb 48 NP---- 49 usage_00117.pdb 51 TP---- 52 usage_00118.pdb 52 TP---- 53 usage_00119.pdb 60 HH---- 61 usage_00120.pdb 61 HH---- 62 usage_00140.pdb 46 NP---- 47 usage_00363.pdb 48 NP---- 49 usage_00464.pdb 48 NP---- 49 usage_00465.pdb 48 NP---- 49 usage_00466.pdb 48 NP---- 49 usage_00491.pdb 48 NP---- 49 usage_00520.pdb 48 NP---- 49 usage_00537.pdb 48 NP---- 49 usage_00538.pdb 48 NP---- 49 usage_00609.pdb 48 NP---- 49 usage_00610.pdb 48 NP---- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################