################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:27 2021 # Report_file: c_0737_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00078.pdb # 2: usage_00079.pdb # 3: usage_00091.pdb # 4: usage_00092.pdb # 5: usage_00093.pdb # 6: usage_00125.pdb # 7: usage_00126.pdb # 8: usage_00127.pdb # 9: usage_00614.pdb # 10: usage_00615.pdb # 11: usage_00616.pdb # 12: usage_00638.pdb # 13: usage_00665.pdb # # Length: 72 # Identity: 34/ 72 ( 47.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 72 ( 52.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 72 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00079.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00091.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00092.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00093.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00125.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00126.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00127.pdb 1 ----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMN 56 usage_00614.pdb 1 NRLPVPMMNILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLA 60 usage_00615.pdb 1 ----VPMMNILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLA 56 usage_00616.pdb 1 NRLPVPMMNILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLA 60 usage_00638.pdb 1 HVLPTPMMNVING------NVDIQEFMIMPVGAKSLHEAVRMGAETFHTLKGLLQERGES 54 usage_00665.pdb 1 KTLPVPMMNIVNGGEHADNNVDIQEFMIMPVGAPNFREALRMGAQIFHSLKSVLSAKGLN 60 vPMMNi NG VD QEFMI PVGA EA R e FH L L kG usage_00078.pdb 57 TAVGDEGGYAPN 68 usage_00079.pdb 57 TAVGDEGGYAPN 68 usage_00091.pdb 57 TAVGDEGGYAPN 68 usage_00092.pdb 57 TAVGDEGGYAPN 68 usage_00093.pdb 57 TAVGDEGGYAPN 68 usage_00125.pdb 57 TAVGDEGGYAPN 68 usage_00126.pdb 57 TAVGDEGGYAPN 68 usage_00127.pdb 57 TAVGDEGGYAPN 68 usage_00614.pdb 61 TSVGDEGGFAPD 72 usage_00615.pdb 57 TSVGDEGGFAPD 68 usage_00616.pdb 61 TSVGDEGGFAPD 72 usage_00638.pdb 55 TAVGDEGGFAPN 66 usage_00665.pdb 61 TAVGDEGGFAPN 72 T VGDEGG AP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################