################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:22 2021 # Report_file: c_1484_249.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00122.pdb # 2: usage_00491.pdb # 3: usage_01220.pdb # 4: usage_01285.pdb # 5: usage_01301.pdb # 6: usage_01420.pdb # 7: usage_01421.pdb # 8: usage_01422.pdb # 9: usage_02961.pdb # 10: usage_04405.pdb # 11: usage_04406.pdb # # Length: 49 # Identity: 1/ 49 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 49 ( 30.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 49 ( 46.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 TPLTEAVAAADSQGRF----LSSTELQVAFGRFRQ-------------- 31 usage_00491.pdb 1 TPLTEAIAAADLRGSY----LSNTELQAVFGRFNRA------------- 32 usage_01220.pdb 1 PVSFAVEILKS-LGLFGPEA-EAELQIFAAEHR---------------- 31 usage_01285.pdb 1 TPITEAIAAADTQGRF----LSNTELQAVDGRFKRA------------- 32 usage_01301.pdb 1 TPLTEAVSVADSQGRF----LSSTEIQVAFGRFRQAKAGLEAAKALTSK 45 usage_01420.pdb 1 -PLTEAVSVADSQGRF----LSSTEIQVAFGRFRQAK------------ 32 usage_01421.pdb 1 -PLTEAVSVADSQGRF----LSSTEIQVAFGRFRQAK------------ 32 usage_01422.pdb 1 TPLTEAVSVADSQGRF----LSSTEIQVAFGRFRQAK------------ 33 usage_02961.pdb 1 TPITEAIAAADTQGRF----LSNTELQAVDGRFKRA------------- 32 usage_04405.pdb 1 TPLTEAVSIADSQGRF----LSSTEIQVAFGRFRQA------------- 32 usage_04406.pdb 1 TPLTEAVSIADSQGRF----LSSTEIQVAFGRFRQAKAGLEAAKALTSK 45 p tea ad G f s te q grf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################