################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:10 2021 # Report_file: c_1089_15.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00077.pdb # 2: usage_01342.pdb # 3: usage_01343.pdb # 4: usage_01418.pdb # 5: usage_01786.pdb # 6: usage_01787.pdb # 7: usage_01788.pdb # # Length: 78 # Identity: 8/ 78 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 78 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 78 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 EQRLLNTFLELV---QIDSETGN--ESTIQPILKEKFIAL--GLDVKEDEAAKHPKLG-- 51 usage_01342.pdb 1 --DPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDP--------FT 50 usage_01343.pdb 1 --DPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDP--------FT 50 usage_01418.pdb 1 ----EVHFNRTLDSILVPRVVGSRGHQQVREYLVQSLNGL--GFQTEVDE--------FK 46 usage_01786.pdb 1 --DPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDP--------FT 50 usage_01787.pdb 1 --DPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDP--------FT 50 usage_01788.pdb 1 --DPQRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDP--------FT 50 l lv r Gs qvr L l L G ve D usage_00077.pdb 52 --------A--NNLVCTN 59 usage_01342.pdb 51 ASTP-LGPVDFGNVVATL 67 usage_01343.pdb 51 ASTP-LGPVDFGNVVATL 67 usage_01418.pdb 47 QRVPVFGELTFANVVGTI 64 usage_01786.pdb 51 ASTP-LGPVDFGNVVATL 67 usage_01787.pdb 51 ASTP-LGPVDFGNVVATL 67 usage_01788.pdb 51 ASTP-LGPVDFGNVVATL 67 NvV T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################