################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:15 2021 # Report_file: c_0031_16.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00054.pdb # 2: usage_00099.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # # Length: 219 # Identity: 37/219 ( 16.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/219 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/219 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 -ERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYD 59 usage_00099.pdb 1 DVKFAFIPKLTGVGFFTSGGEGAKE-GDKLGVQVKYDGPSEASVSGQVKYINNFINQNYD 59 usage_00108.pdb 1 MLTIGVIG-KSVHPYWSQVEQGVKAAGKALGVDTKFFVPQKCDINAQLQMLESFIAEGVN 59 usage_00109.pdb 1 MLTIGVIG-KSVHPYWSQVEQGVKAAGKALGVDTKFFVPQKCDINAQLQMLESFIAEGVN 59 i I G k GkaLGvd k P Q q Fi g usage_00054.pdb 60 AIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAH 119 usage_00099.pdb 60 AL-VSSTSVDGLSQSLQRAKKKG-TVLTWDSDVNPKDRSFYISQGTPDQLANLLIE-TSK 116 usage_00108.pdb 60 GIAIAPSDPTAVIPTIKKALEMGIPVVTLDTDSPDSGRYVYIGTD-NYQAGYTAGLIMKE 118 usage_00109.pdb 60 GIAIAPSDPTAVIPTIKKALEMGIPVVTLDTDSPDSGRYVYIGTD-NYQAGYTAGLIMKE 118 i p p k A G v T D D R YI Q g usage_00054.pdb 120 QVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEG 179 usage_00099.pdb 117 Q-IGDKGKVAFFYSSPTVTDQNQWVTKAKEIIKEKYPNWEIVTTQYGENNAQKSLSVGEN 175 usage_00108.pdb 119 L-LGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKD--SEIEIVDILNDCEDGARAVSLAEA 175 usage_00109.pdb 119 L-LGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKD--SEIEIVDILNDCEDGARAVSLAEA 175 g KgKV S T Q K Ik EIV d s aE usage_00054.pdb 180 IIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVG- 217 usage_00099.pdb 176 ILKTYPDINAVICPDATALPA-AQAAENLK-DKKVVVTG 212 usage_00108.pdb 176 ALNAHPDLDAFFGVYAYNGPAQALVVKNAGKVGKVKIVC 214 usage_00109.pdb 176 ALNAHPDLDAFFGVYAYNGPAQALVVKNAGKVGKVKIVC 214 l a PDldA A PA A N kv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################