################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:57 2021 # Report_file: c_1276_35.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00316.pdb # 2: usage_00352.pdb # 3: usage_00353.pdb # 4: usage_00424.pdb # 5: usage_00611.pdb # 6: usage_00919.pdb # 7: usage_00920.pdb # 8: usage_00930.pdb # 9: usage_01146.pdb # 10: usage_01147.pdb # 11: usage_01148.pdb # 12: usage_01327.pdb # 13: usage_01394.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 44 ( 29.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 44 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 -SRFVETLVVADDKMAA----FHGAGLKRYLLTVMAAAAKAFKH 39 usage_00352.pdb 1 SHRYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYKH 40 usage_00353.pdb 1 -HRYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYKH 39 usage_00424.pdb 1 -ARQVELLLVADASMAR----KYGRGLQHYLLTLASIANRLYSH 39 usage_00611.pdb 1 -HRYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYK- 38 usage_00919.pdb 1 --RFVETLVVADDKMAA----FHGAGLKRYLLTVMAAAAKAFKH 38 usage_00920.pdb 1 --RFVETLVVADDKMAA----FHGAGLKRYLLTVMAAAAKAFKH 38 usage_00930.pdb 1 -ARQVELLLVADASMAR----KYGRGLQHYLLTLASIANRLYSH 39 usage_01146.pdb 1 -HRYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYKH 39 usage_01147.pdb 1 SHRYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYKH 40 usage_01148.pdb 1 --RYVETMLVADQSMAE----FHGSGLKHYLLTLFSVAARLYKH 38 usage_01327.pdb 1 --------LTIRADTFAEVFGIDVKHAYAALDDAATKLFNR--- 33 usage_01394.pdb 1 -ARQVELLLVADASMAR----KYGRGLQHYLLTLASIANRLYSH 39 vad ma g gl yLlt a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################