################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:27 2021 # Report_file: c_0990_37.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00104.pdb # 2: usage_00227.pdb # 3: usage_00228.pdb # 4: usage_00229.pdb # 5: usage_00230.pdb # 6: usage_00335.pdb # # Length: 42 # Identity: 10/ 42 ( 23.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 42 ( 40.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 42 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 PLIVKPSH-----GMSKVDHASELQKALVEAFQHDSDVLIE- 36 usage_00227.pdb 1 PVIIKPVHEG-SVGMSKVEKAEDFAAAIEKATQHDAVVMAEK 41 usage_00228.pdb 1 PVIIKPVHES-SVGMSKVEKAEDFAAAIEKATQHDAVVMAEK 41 usage_00229.pdb 1 PVIIKPVHEV---GMSK------FAAAIEKATQHDAVVMAEK 33 usage_00230.pdb 1 PVIIKPVHEGSSVGMSKVEKAEDFAAAIEKATQHDAVVMAEK 42 usage_00335.pdb 1 PLFVKPAS------VEKVKSADALPAALEEAAKHDKIVIVE- 35 P i KP h msK aA e A qHD V E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################