################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:57 2021 # Report_file: c_0906_136.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00220.pdb # 2: usage_00605.pdb # 3: usage_00728.pdb # 4: usage_00730.pdb # 5: usage_00731.pdb # 6: usage_00734.pdb # 7: usage_00738.pdb # 8: usage_00740.pdb # 9: usage_00744.pdb # 10: usage_00746.pdb # 11: usage_00750.pdb # 12: usage_00751.pdb # 13: usage_01180.pdb # # Length: 53 # Identity: 1/ 53 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 53 ( 54.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 53 ( 45.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 TFKRTSGSSVKREEEV---LTGN------LQT-LKIRV--HEGYEEFTMVGR- 40 usage_00605.pdb 1 ------MRVVIQRVKGAILSVRKEN---------LEIISEIKNGLICFLGIHK 38 usage_00728.pdb 1 ------MRVVIQRVKGAILSVRKE---------ELEIISEIKNGLICFLGIHK 38 usage_00730.pdb 1 ------MRVVIQRVKGAILSVRKENIGEN-EK-ELEIISEIKNGLICFLGIHK 45 usage_00731.pdb 1 ------MRVVIQRVKGAILSVRKENIGEN-EK-ELEIISEIKNGLICFLGIHK 45 usage_00734.pdb 1 -------RVVIQRVKGAILSVRK--------K-ELEIISEIKNGLICFLGIHK 37 usage_00738.pdb 1 ------MRVVIQRVKGAILSVRK--------K-ELEIISEIKNGLICFLGIHK 38 usage_00740.pdb 1 -------RVVIQRVKGAILSVRKENIGEN-EK-ELEIISEIKNGLICFLGIHK 44 usage_00744.pdb 1 -------RVVIQRVKGAILSVRKENIGEN-EK-ELEIISEIKNGLICFLGIHK 44 usage_00746.pdb 1 ------MRVVIQRVKGAILSVRKENIGEN-EK-ELEIISEIKNGLICFLGIHK 45 usage_00750.pdb 1 ------MRVVIQRVKGAILSVRKE----N--EKELEIISEIKNGLICFLGIH- 40 usage_00751.pdb 1 ------MRVVIQRVKGAILSVRKE----N-EK-ELEIISEIKNGLICFLGIHK 41 usage_01180.pdb 1 ------MRVVIQRVKGAILSVRK--------K-ELEIISEIKNGLICFLGIHK 38 rvViqrvkg svrk leii iknglicflgih #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################