################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:20 2021 # Report_file: c_1442_265.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_05632.pdb # 2: usage_05730.pdb # 3: usage_07132.pdb # 4: usage_08574.pdb # 5: usage_12013.pdb # 6: usage_16706.pdb # 7: usage_16707.pdb # 8: usage_16708.pdb # 9: usage_16900.pdb # 10: usage_19071.pdb # 11: usage_19322.pdb # # Length: 20 # Identity: 2/ 20 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 20 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 20 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_05632.pdb 1 --HWYQQKSGTSPKRWIYD- 17 usage_05730.pdb 1 --HWYQQKSGTSPKRWIYD- 17 usage_07132.pdb 1 --HWYQQKSGTSPKRWIYD- 17 usage_08574.pdb 1 --AIEWQHGDLTLRGWV-AD 17 usage_12013.pdb 1 YMYWYQQKSGSSPKPWIYR- 19 usage_16706.pdb 1 YMHWYQQKSGTSPKRWI--- 17 usage_16707.pdb 1 YMHWYQQKSGTSPKRWI--- 17 usage_16708.pdb 1 YMHWYQQKSGTSPKRWI--- 17 usage_16900.pdb 1 NMHWYQQKPSSSPKPWLHG- 19 usage_19071.pdb 1 YMQWYQQKPGTSPKRWIYD- 19 usage_19322.pdb 1 --AIEWQHGDLTLRGWV-AD 17 Q W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################