################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:26 2021 # Report_file: c_0444_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00007.pdb # 4: usage_00014.pdb # 5: usage_00018.pdb # 6: usage_00024.pdb # 7: usage_00026.pdb # # Length: 92 # Identity: 5/ 92 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 92 ( 9.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 92 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --IFVGGIGPDV-------RPKEFEEFFSQWGTIIDAQLML-D-KD--TGQSRGFGFVTY 47 usage_00004.pdb 1 --IFVGGLPYHT-------TDASLRKYFEGFGDIEEAVVITDR-QT-GKS--RGYGFVTM 47 usage_00007.pdb 1 IKMFVGQVPRTW-------SEKDLRELFEQYGAVYEINVLRDRSQNPPQS--KGCCFVTF 51 usage_00014.pdb 1 KKIFVGGIKEDT-------EEHHLRDYFEQYGKIEVIEIMTDR-GS-GKK--RGFAFVTF 49 usage_00018.pdb 1 SVIVVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPE-E-DG--KT--KGYIFLEY 53 usage_00024.pdb 1 NKIFVGGIPHNC-------GETELREYFKKFGVVTEVVMIYDA-EK-QRP--RGFGFITF 49 usage_00026.pdb 1 -KIFVGGLPYHT-------SDKTLHEYFEQFGDIEEAVVITDR-NT-QKS--RGYGFVTM 48 ifVg F G G F t usage_00002.pdb 48 DSADAVDRVCQNK--FID--FK-D-RKIEIKR 73 usage_00004.pdb 48 ADRAAAERACKDP--NPI--ID-G-RKANVNL 73 usage_00007.pdb 52 YTRKAALEAQNALHNMKVLPGMHH-PIQMKP- 81 usage_00014.pdb 50 DDHDSVDKIVIQK--YHT--VN-G-HNCEVR- 74 usage_00018.pdb 54 ASPAHAVDAVKNAD-GYK--LD-KQHTFRVNL 81 usage_00024.pdb 50 EDEQSVDQAVNMH--FHD--IM-G-KKVEVK- 74 usage_00026.pdb 49 KDRASAERACKDP--NPI--ID-G-RKANVNL 74 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################