################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:05 2021 # Report_file: c_0782_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00070.pdb # 5: usage_00071.pdb # 6: usage_00074.pdb # 7: usage_00163.pdb # 8: usage_00164.pdb # 9: usage_00165.pdb # 10: usage_00189.pdb # 11: usage_00317.pdb # # Length: 53 # Identity: 11/ 53 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 53 ( 22.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 53 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 --KPYAKNSVALQAVENGEVDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 49 usage_00024.pdb 1 YGKPYAKNSVALQAVENGEVDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 51 usage_00025.pdb 1 -GKPYAKNSVALQAVENGEVDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 50 usage_00070.pdb 1 --KPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 49 usage_00071.pdb 1 -GKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 50 usage_00074.pdb 1 --KPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 49 usage_00163.pdb 1 -GKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 50 usage_00164.pdb 1 -GKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 50 usage_00165.pdb 1 -GKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ--NVHTRLNFVRH 50 usage_00189.pdb 1 NFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKT-GENS-GKTQLHYFKH 51 usage_00317.pdb 1 --TAYKGNSTVMKAVNAGQVDSGVIYHYYPFVDGAKT-GENS-NNIKLYY--- 46 Y NS AV G D I YY t L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################