################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:20 2021 # Report_file: c_0825_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00072.pdb # 2: usage_00120.pdb # 3: usage_00121.pdb # 4: usage_00140.pdb # 5: usage_00141.pdb # 6: usage_00142.pdb # 7: usage_00217.pdb # # Length: 89 # Identity: 13/ 89 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 89 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 89 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 -TILDTARFRALLAEYLRVAPQS-VHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAE---- 54 usage_00120.pdb 1 -TILDTARFRFLLSEYFDIDVRN-IHGYI-GEHGDTELPVWSQTRIGSEPISRYDKYKPD 57 usage_00121.pdb 1 GNQLDSQRLKERLYNAG-A--RNIRRAWIIGEHGDSMFVAKSLADF-------------- 43 usage_00140.pdb 1 --ILDTARFRFLLGEYFSVAPQN-VHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGE 57 usage_00141.pdb 1 -TILDTARFRFLLGEYFSVAPQN-VHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGE 58 usage_00142.pdb 1 -TILDTARFRFLLGEYFSVAPQN-VHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGE 58 usage_00217.pdb 1 --TLDSARFRFMLSEYFGAAPQN-VHAHIIGEHGDTELPVWSHANVGGVPVSELVEKNDA 57 LD aRfr L ey n ha i GEHGD e vwS a usage_00072.pdb 55 -SPE----DRARIDEGVRRAAYRIIEGKG 78 usage_00120.pdb 58 GSNK----DLDEIFVNVRDAAYHIIER-- 80 usage_00121.pdb 44 ----DGEVDWEAVENDVRFVAAEVIKR-- 66 usage_00140.pdb 58 EAQK----DLERIFVNVRDAAYQIIEK-- 80 usage_00141.pdb 59 EAQK----DLERIFVNVRDAAYQIIEK-- 81 usage_00142.pdb 59 EAQK----DLERIFVNVRDAAYQIIEK-- 81 usage_00217.pdb 58 YKQE----ELDQIVDDVKNAAYHIIEK-- 80 d i Vr aAy iIe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################