################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:38 2021 # Report_file: c_1404_35.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00375.pdb # 2: usage_00673.pdb # 3: usage_00724.pdb # 4: usage_00741.pdb # 5: usage_00742.pdb # # Length: 99 # Identity: 5/ 99 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 99 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 99 ( 46.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00375.pdb 1 SQDINNTSIPMLLRDAL----------HHHYIPTLDQLIALLKSKLPEWD--------VP 42 usage_00673.pdb 1 ------------------TNDVYPTAVRLALLLSQNQVQTALHRLIAAFEAKGREFATVI 42 usage_00724.pdb 1 -----------------TSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEII 43 usage_00741.pdb 1 SQDINNTAIPMMIRDAI----------VTLYLPALDGIIGSLTSKLVDWD--------VP 42 usage_00742.pdb 1 SQDINNTAIPMMIRDAI----------VTLYLPALDGIIGSLTSKLVDWD--------VP 42 i L v usage_00375.pdb 43 MLARTHGQPASPTNLAKEFMVWIERLEEQRTMLLS---- 77 usage_00673.pdb 43 KIGRTQLQDAVPITLGQEFEAFAATLRE----------- 70 usage_00724.pdb 44 TMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKD 82 usage_00741.pdb 43 MLARTHGQPASPTNLAKEFVVWIERLREQRRQLCEV--- 78 usage_00742.pdb 43 MLARTHGQPASPTNLAKEFVVWIERLREQRRQLCEV--- 78 Rthgq A P l eF l e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################