################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:07 2021 # Report_file: c_0516_13.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00178.pdb # 7: usage_00235.pdb # # Length: 81 # Identity: 5/ 81 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 81 ( 34.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 81 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 ----TSEAREFAT-RTG--V-S-GPVLELAAG-GRLTFPFLDL-G-WEVTALELSTSVLA 48 usage_00057.pdb 1 ---GTSEAREFAT-RT---V-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA 49 usage_00058.pdb 1 ---GTSEAREFAT-RTG-PV-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA 51 usage_00059.pdb 1 ---GTSEAREFAT-RTG--V-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA 50 usage_00060.pdb 1 ---GTSEAREFAT-RTG-PV-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA 51 usage_00178.pdb 1 PEVAGQIATAAS--AVHP-KGEEPVFLELGVGTGRIALPLIAR-G-YRYIALDADAA-LE 54 usage_00235.pdb 1 ----DIGARFFQ-HLPE-NL-E-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP-AVA 51 Ar f g leL G Gr p ld g v al s la usage_00056.pdb 49 AFRKRLAEAPADVRDRCTLVQ 69 usage_00057.pdb 50 AFRKRLAEAPADVRDRCTLVQ 70 usage_00058.pdb 52 AFRKRLAEAPADVRDRCTLVQ 72 usage_00059.pdb 51 AFRKRLAEAPADVRDRCTLVQ 71 usage_00060.pdb 52 AFRKRLAEAPADVRDRCTLVQ 72 usage_00178.pdb 55 VFRQKIA---G-VDRKVQVVQ 71 usage_00235.pdb 52 SSRLNVETNPE-ALDRCEFI- 70 fR a v drc v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################