################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:24 2021 # Report_file: c_0404_49.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00085.pdb # 2: usage_00091.pdb # 3: usage_00299.pdb # 4: usage_00300.pdb # # Length: 121 # Identity: 7/121 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/121 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/121 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 GNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKG 60 usage_00091.pdb 1 -SRSVDIWLRVLAKPQNTAEVQKVQ-LT----GEPVPMARCVSTGGRPPAQITWHSDL-- 52 usage_00299.pdb 1 ---------------LPSLNPGPAL-EE---GQGLTLAASCTAE-GSPAPSVTWDTEVKG 40 usage_00300.pdb 1 --------------PENHAEAQEVT-IG----PQSVAVARCVSTGGRPPARITWISSLGG 41 n e v A C s G Pp tW l usage_00085.pdb 61 ----EAEYQEIRNPNG-TVTVISRYRLVPSREAHQQSLACIVNYH--MDRFKESLTLNVQ 113 usage_00091.pdb 53 GGMPQTSQVPGFLSGT-VTVTSLWILVPSSQV-DGKQVTCKVEHESFEKPQLLTVSLTVY 110 usage_00299.pdb 41 ----TTSSRSFKHS-R-SAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI---- 90 usage_00300.pdb 42 ----EAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 97 s lvps g tC V h usage_00085.pdb - usage_00091.pdb 111 Y 111 usage_00299.pdb - usage_00300.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################