################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:25:48 2021 # Report_file: c_0145_24.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00067.pdb # 2: usage_00078.pdb # 3: usage_00111.pdb # 4: usage_00160.pdb # 5: usage_00161.pdb # 6: usage_00162.pdb # 7: usage_00233.pdb # 8: usage_00234.pdb # 9: usage_00269.pdb # 10: usage_00298.pdb # 11: usage_00317.pdb # 12: usage_00358.pdb # 13: usage_00359.pdb # 14: usage_00360.pdb # 15: usage_00363.pdb # 16: usage_00364.pdb # 17: usage_00365.pdb # 18: usage_00482.pdb # 19: usage_00512.pdb # 20: usage_00573.pdb # # Length: 128 # Identity: 9/128 ( 7.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/128 ( 44.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/128 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00078.pdb 1 -VKVEESGGGLVQPG-GSMKLSCVASGFT--FSNYWMEWVRQSPEKGLEWVAEIRLK-SN 55 usage_00111.pdb 1 -VKLDETGGGLVQPG-RPMKLSCVASGFT--FSDYWMNWVRQSPEKGLEWVAQIRNK-PY 55 usage_00160.pdb 1 -VKLDETGGGLVQPG-RPMKLSCVASGFT--FSDYWMNWVRQSPEKGLEWVAQIRNK-PY 55 usage_00161.pdb 1 --KLDETGGGLVQPG-RPMKLSCVASGFT--FSDYWMNWVRQSPEKGLEWVAQIRNK-PY 54 usage_00162.pdb 1 -VQLQQSGGGLVQPG-GSMKIFCAASGFT--FSDAWMDWVRQSPEKGLEWVAEIRNK-AN 55 usage_00233.pdb 1 -VKLEESGGGLVQPG-GSMKLSCAASGFT--FSDAWMDWVRQSPEKGLEWVAEIRSK-VN 55 usage_00234.pdb 1 --KLEESGGGLVQPG-GSMKLSCAASGFT--FSDAWMDWVRQSPEKGLEWVAEIRSK-VN 54 usage_00269.pdb 1 -VKLDETGGGLVQPG-GAMKLSCVTSGFT--FGHYWMNWVRQSPEKGLEWVAQFRNK-PY 55 usage_00298.pdb 1 -VKVEESGGGLVQPG-GSMKLSCVASGFT--FSNYWMEWVRQSPEKGLEWVAEIRLK-SN 55 usage_00317.pdb 1 ---ILVKQSPMLVAYDNAVNLSCKYSYNLFS-REFRASLHKG-LDS-AVEVCVVYGNYSQ 54 usage_00358.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00359.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00360.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00363.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00364.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00365.pdb 1 -VKVEESGGGLVQPG-GSMKISCVVSGLT--FSNYWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00482.pdb 1 -VKLEESGGGLVQPG-GSMKLSCVASGFI--FSNHWMNWVRQSPEKGLEWVAEIRSK-SI 55 usage_00512.pdb 1 -VKLEESGGGLVQPG-GSMKLSCVVSGLT--FSRFWMSWVRQSPEKGLEWVAEIRLK-SD 55 usage_00573.pdb 1 EVKLDETGGGLVQPG-RPMKLSCVASGFT--FSDYWMNWVRQSPEKGLEWVAQIRNK-PY 56 ggglvqpg mk sC Sg wm wvrq pek lewVa r k usage_00067.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00078.pdb 56 NYATHYAE--SVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGA--VGAMD-YWG 110 usage_00111.pdb 56 NYETYYSD--SVKGRFTISRDD--SSVYLQMNNLRVEDMGIYYCTGSYY--GMD---YWG 106 usage_00160.pdb 56 NYETYYSD--SVKGRFTISRDDSKSSVYLQMNNLRAEDMGIYYCTSYGY--HGA---YWG 108 usage_00161.pdb 55 NYETYYSD--SVKGRFTISRDDSKSSVYLQMNNLRAEDMGIYYCTSYGY--HGA---YWG 107 usage_00162.pdb 56 NHETYYAE--SVKGRFTITRDDSKSRMSLQMNSLRAEDTGIYYCSGGKV--RNA---YWG 108 usage_00233.pdb 56 NHAIHYAE--SVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGWSF----L---YWG 106 usage_00234.pdb 55 NHAIHYAE--SVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGWSF----L---YWG 105 usage_00269.pdb 56 NYETYYSD--SVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY--GME---YLG 108 usage_00298.pdb 56 NYATHYAE--SVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGA--VGAMD-YWG 110 usage_00317.pdb 55 QLQVYSKTGF----NCDGKLGN--ESVTFYLQNLYVNQTDIYFCKIEVMYPPPYLDNEKS 108 usage_00358.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00359.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00360.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00363.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00364.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00365.pdb 56 NYATYYAE--SVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPM-----D---YWG 105 usage_00482.pdb 56 NSATHYAE--SVKGRFTISRDDSKSAVYLQMTDLRTEDTGVYYCSRNYY--GSTYD-YWG 110 usage_00512.pdb 56 NYATHYAE--SVKGKFTISRDDSKSRLYLQMNSLRTEDTGIYYCKIYFY--SFS---YWG 108 usage_00573.pdb 57 NYETYYSD--SVKGRFTISRDDSKSSVYLQMNNLRVEDMGIYYCTGSYY--GMD---YWG 109 n y ft rdd s lqm Lr ed giYyC y g usage_00067.pdb 106 QGTSVTV- 112 usage_00078.pdb 111 QGTSVTV- 117 usage_00111.pdb 107 QGTSVTVS 114 usage_00160.pdb 109 QGTLVTVS 116 usage_00161.pdb 108 QGTLVTVS 115 usage_00162.pdb 109 QGTTVTV- 115 usage_00233.pdb 107 QGTLVTVS 114 usage_00234.pdb 106 QGTLVTVS 113 usage_00269.pdb 109 QGTSVTVS 116 usage_00298.pdb 111 QGTSVTVS 118 usage_00317.pdb 109 NGTIIHVK 116 usage_00358.pdb 106 QGTSVTVS 113 usage_00359.pdb 106 QGTSVTV- 112 usage_00360.pdb 106 QGTSVTV- 112 usage_00363.pdb 106 QGTSVTVS 113 usage_00364.pdb 106 QGTSVTVS 113 usage_00365.pdb 106 QGTSVTV- 112 usage_00482.pdb 111 QGTTLTV- 117 usage_00512.pdb 109 QGTLVTVS 116 usage_00573.pdb 110 QGTSVTVS 117 qGT tV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################