################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:43 2021 # Report_file: c_1367_57.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00204.pdb # 2: usage_00205.pdb # 3: usage_00206.pdb # 4: usage_00207.pdb # 5: usage_00316.pdb # 6: usage_00386.pdb # 7: usage_00721.pdb # 8: usage_00722.pdb # 9: usage_01083.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 54 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 54 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 ----------KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKL- 40 usage_00205.pdb 1 ----------KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKL- 40 usage_00206.pdb 1 ----------KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKL- 40 usage_00207.pdb 1 ----------KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKL- 40 usage_00316.pdb 1 N----ID---TVREIITVAS--ILIKF------SREDIVENRANFIAFLNEIG- 38 usage_00386.pdb 1 -DQE-IALKLGCLEIRRSYGEM------------RGNALE-KKSNYEVLEKDVG 39 usage_00721.pdb 1 ------------DEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKLG 39 usage_00722.pdb 1 ----YE----KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKLG 43 usage_01083.pdb 1 ----------KKDEYINAFY--ELRKHKGITLENAAEIMS-DYVYFAVMMAKLG 41 E i i av #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################