################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:08 2021 # Report_file: c_0162_8.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00171.pdb # 2: usage_00192.pdb # 3: usage_00193.pdb # 4: usage_00194.pdb # 5: usage_00195.pdb # 6: usage_00196.pdb # 7: usage_00197.pdb # 8: usage_00203.pdb # 9: usage_00299.pdb # 10: usage_00300.pdb # 11: usage_00357.pdb # 12: usage_00542.pdb # # Length: 138 # Identity: 39/138 ( 28.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/138 ( 61.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/138 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 -GTVFKAKNRETHEIVALKRVRLD----GVPSSALREICLLKELKHKNIVRLHDVLHSDK 55 usage_00192.pdb 1 -GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 59 usage_00193.pdb 1 T--VFKA-------IVALKRVRLD----GVPSSALREICLLKELKHKNIVRLHDVLHSDK 47 usage_00194.pdb 1 -GTVFKAKNR--HEIVALKRVRLD----GVPSSALREICLLKELKHKNIVRLHDVLHSDK 53 usage_00195.pdb 1 -GTVFKAKNR--HEIVALKRVRLD----GVPSSALREICLLKELKHKNIVRLHDVLHSDK 53 usage_00196.pdb 1 -GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 59 usage_00197.pdb 1 -GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 59 usage_00203.pdb 1 -GVVYKAQN-NYGETFALKKIRL----------TIREISILKELKHSNIVKLYDVIHTKK 48 usage_00299.pdb 1 -GTVFKAKNRETHEIVALKRV---------PSSALREICLLKELKHKNIVRLHDVLH--- 47 usage_00300.pdb 1 -GTVFKAKNRETHEIVALKRVRLE----GVPSSALREICLLKELKHKNIVRLHDVLHS-K 54 usage_00357.pdb 1 -GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 59 usage_00542.pdb 1 -GVVLKCRHKETHEIVAIKKFKV-------KETTLRELKMLRTLKQENIVELKEAFRRRG 52 V Ka ivAlK lREi LkeLKh NIV L dv h usage_00171.pdb 56 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 115 usage_00192.pdb 60 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 119 usage_00193.pdb 48 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 107 usage_00194.pdb 54 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 113 usage_00195.pdb 54 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 113 usage_00196.pdb 60 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 119 usage_00197.pdb 60 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 119 usage_00203.pdb 49 RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI 108 usage_00299.pdb 48 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 107 usage_00300.pdb 55 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 114 usage_00357.pdb 60 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 119 usage_00542.pdb 53 KLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLI 112 kL LVFE dqdlkk d c g l pe vKSfl QLlkg CH r vlHRDlKPqNLLI usage_00171.pdb 116 NRNGELKLADFGLARAFG 133 usage_00192.pdb 120 NRNGELKLANFGLARAFG 137 usage_00193.pdb 108 NRNGELKLANFGLARAFG 125 usage_00194.pdb 114 NRNGELKLANFGLARAFG 131 usage_00195.pdb 114 NRNGELKLANFGLARAFG 131 usage_00196.pdb 120 NRNGELKLANFGLARAFG 137 usage_00197.pdb 120 NRNGELKLANFGLARAFG 137 usage_00203.pdb 109 NREGELKIADFGLARAF- 125 usage_00299.pdb 108 NRNGELKLADFGLARAF- 124 usage_00300.pdb 115 NRNGELKLADFGLARAF- 131 usage_00357.pdb 120 NRNGELKLANFGLARAFG 137 usage_00542.pdb 113 SHNDVLKLCDFGFARNLS 130 nrngeLKla FGlARaf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################