################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:13 2021 # Report_file: c_0974_8.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00235.pdb # 2: usage_00236.pdb # 3: usage_00237.pdb # 4: usage_00238.pdb # 5: usage_00322.pdb # 6: usage_00323.pdb # 7: usage_00530.pdb # 8: usage_00564.pdb # 9: usage_01151.pdb # 10: usage_01152.pdb # # Length: 80 # Identity: 4/ 80 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 80 ( 55.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 80 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00235.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00236.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00237.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00238.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00322.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00323.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00530.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_00564.pdb 1 NVKYGIVLDAGSS--------HTNLYIYKWPA--EKENVVQQLEECQVKG--PGI-SK-Y 46 usage_01151.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 usage_01152.pdb 1 ---N-ITFGNYTRDASGNLDYGTQAYAYYPGNYQ-------G-AGSSWYNYNQ-SNIRNP 47 n Itfgnytr gTqaYaYypgn g agsswyn q s ir p usage_00235.pdb 48 GS-EEYGRQTFTHAIGHALG 66 usage_00236.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_00237.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_00238.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_00322.pdb 48 GS-EEYGRQTFTHKIGHALG 66 usage_00323.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_00530.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_00564.pdb 47 AQKTDEIAAYLA-------- 58 usage_01151.pdb 48 GS-EEYGRQTFTHEIGHALG 66 usage_01152.pdb 48 GS-EEYGRQTFTHAIGHALG 66 gs eeygrqtft #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################