################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:07 2021 # Report_file: c_0474_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00054.pdb # 6: usage_00055.pdb # 7: usage_00056.pdb # 8: usage_00057.pdb # 9: usage_00060.pdb # 10: usage_00061.pdb # # Length: 126 # Identity: 68/126 ( 54.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/126 ( 62.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/126 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 LGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLG 60 usage_00013.pdb 1 LGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG 60 usage_00014.pdb 1 LGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG 60 usage_00015.pdb 1 LGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG 60 usage_00054.pdb 1 LGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG 60 usage_00055.pdb 1 LGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG 60 usage_00056.pdb 1 LGVFRTFAAVGVPPSIMGIGPAVAIPAAVKAAGLQIDDIDLFEINEAFASQFVYCQKKLE 60 usage_00057.pdb 1 LGVFRTFAAVGVPPSIMGIGPAVAIPAAVKAAGLQIDDIDLFEINEAFASQFVYCQKKLE 60 usage_00060.pdb 1 LGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLR 60 usage_00061.pdb 1 LGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLR 60 LGv r a VGV P IMGiGPA AIP a aGL D D FEINEAFAsQ YC KL usage_00001.pdb 61 IDLNKVNPRGGAIALGHPLGCTGARQVATILRELK---KD-QIGVVSMCIGTGMGAAAIF 116 usage_00013.pdb 61 LDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 120 usage_00014.pdb 61 LDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 120 usage_00015.pdb 61 LDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 120 usage_00054.pdb 61 LDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 120 usage_00055.pdb 61 LDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 120 usage_00056.pdb 61 IDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFGVVSMCIGTGMGAAAVF 120 usage_00057.pdb 61 IDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFGVVSMCIGTGMGAAAVF 120 usage_00060.pdb 61 LPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKR-AYGVVSMCIGTGMGAAAVF 119 usage_00061.pdb 61 LPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKR-AYGVVSMCIGTGMGAAAVF 119 p K N GGA A GHPLG TGAR V TlL E K GVVSMCIGTGMGAAAvF usage_00001.pdb 117 IKE--- 119 usage_00013.pdb 121 E----- 121 usage_00014.pdb 121 ERGDG- 125 usage_00015.pdb 121 ERGDG- 125 usage_00054.pdb 121 ERGDG- 125 usage_00055.pdb 121 ERGDGV 126 usage_00056.pdb 121 ER---- 122 usage_00057.pdb 121 ER---- 122 usage_00060.pdb 120 EYP--- 122 usage_00061.pdb 120 EYP--- 122 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################