################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:26:09 2021 # Report_file: c_0707_58.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00056.pdb # 2: usage_00083.pdb # 3: usage_00107.pdb # 4: usage_00159.pdb # 5: usage_00262.pdb # 6: usage_00300.pdb # 7: usage_00301.pdb # 8: usage_00373.pdb # 9: usage_00406.pdb # 10: usage_00415.pdb # 11: usage_00487.pdb # 12: usage_00488.pdb # 13: usage_00498.pdb # 14: usage_00503.pdb # 15: usage_00506.pdb # 16: usage_00507.pdb # 17: usage_00524.pdb # 18: usage_00525.pdb # 19: usage_00557.pdb # 20: usage_00620.pdb # 21: usage_00621.pdb # 22: usage_00701.pdb # 23: usage_00746.pdb # 24: usage_00747.pdb # 25: usage_00756.pdb # 26: usage_00763.pdb # 27: usage_00811.pdb # 28: usage_00869.pdb # # Length: 69 # Identity: 25/ 69 ( 36.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 69 ( 50.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 69 ( 40.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00083.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00107.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMR-SMDFKS 52 usage_00159.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMR-SMDFKS 52 usage_00262.pdb 1 -NPDPAVYQLR---------SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 49 usage_00300.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 52 usage_00301.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 52 usage_00373.pdb 1 -----AVYQLRD-SKS-S--SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 50 usage_00406.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00415.pdb 1 -NPDPAVYQLR---------SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 49 usage_00487.pdb 1 -NPDPAVYQLRD-S---D-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 53 usage_00488.pdb 1 -NPDPAVYQLRD-S---D-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 53 usage_00498.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDM---FKSNS 54 usage_00503.pdb 1 QNPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 57 usage_00506.pdb 1 QNPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 57 usage_00507.pdb 1 QNPDPAVYQLRD-SK--SSD-VCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 55 usage_00524.pdb 1 QNPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 57 usage_00525.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00557.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00620.pdb 1 QNPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 57 usage_00621.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00701.pdb 1 -NPDPAVYQLRD-SK-----SVCLFTDFDSQTNVSQSK--DVYITDKCVLDMRMDFKSNS 51 usage_00746.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 52 usage_00747.pdb 1 -NPDPAVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00756.pdb 1 -----AVYQLKD-PRSQD-STLCLFTDFDSQINVPKTMESGTFITDKTVLDMK-AMDSKS 52 usage_00763.pdb 1 -NPDPAVYQLRR-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 56 usage_00811.pdb 1 -NPDPAVYQLR-SS---D-KSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMR-SMDFKS 53 usage_00869.pdb 1 -----AVYQLRD-SKSSD-KSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMR-SMDFKS 52 AVYQLr vCLFTDFDSQtNVsqsk dvyITDK VLDM S usage_00056.pdb 57 N-------- 57 usage_00083.pdb 57 N-------- 57 usage_00107.pdb 53 NSAVAWSN- 60 usage_00159.pdb 53 N-------- 53 usage_00262.pdb 50 N-------- 50 usage_00300.pdb 53 N-------- 53 usage_00301.pdb 53 N-------- 53 usage_00373.pdb 51 NSAVAW--- 56 usage_00406.pdb 57 N-------- 57 usage_00415.pdb 50 N-------- 50 usage_00487.pdb 54 N-------- 54 usage_00488.pdb 54 N-------- 54 usage_00498.pdb 55 A--VAWSNK 61 usage_00503.pdb 58 N-------- 58 usage_00506.pdb 58 N-------- 58 usage_00507.pdb 56 N-------- 56 usage_00524.pdb 58 N-------- 58 usage_00525.pdb 57 N-------- 57 usage_00557.pdb 57 N-------- 57 usage_00620.pdb 58 N-------- 58 usage_00621.pdb 57 N-------- 57 usage_00701.pdb 52 A--VAWSN- 57 usage_00746.pdb 53 N-------- 53 usage_00747.pdb 57 NSAVAWSN- 64 usage_00756.pdb 53 NGAIAWS-- 59 usage_00763.pdb 57 N-------- 57 usage_00811.pdb 54 N-------- 54 usage_00869.pdb 53 NSAVAWSN- 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################