################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:16 2021 # Report_file: c_0906_116.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00067.pdb # 5: usage_00117.pdb # # Length: 39 # Identity: 5/ 39 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 39 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 39 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 AMDLPGHEDEVYAVDWAAD-G-ELVASGGKDKAVRTWRN 37 usage_00028.pdb 1 SVDLPGHKDEVYTVDWSVD-G-KRVCSGGKDKMVRLWTH 37 usage_00029.pdb 1 SVDLPGHKDEVYTVDWSVD-G-KRVCSGGKDKMVRLWTH 37 usage_00067.pdb 1 -DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 38 usage_00117.pdb 1 VHELKEHNGQVTGVDWAPD-S-NRIVTCGTDRNAYVWTL 37 l H v vDW d s g Dk v W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################