################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:42 2021 # Report_file: c_1341_36.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00103.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00190.pdb # 6: usage_00191.pdb # # Length: 52 # Identity: 3/ 52 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 52 ( 71.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 52 ( 28.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 -----GKTRVLTHRIAYLMAEKHVAPWNILAITF-TNKAAREMRERVQSLLG 46 usage_00139.pdb 1 -PEFRALEGAWAEGVVAMARAG-ARI-IIDDVFLGGAAAQERWRSFV----- 44 usage_00140.pdb 1 -PEFRALEGAWAEGVVAMARAG-ARI-IIDDVFLGGAAAQERWRSFVG---- 45 usage_00141.pdb 1 -PEFRALEGAWAEGVVAMARAG-ARI-IIDDVFLGGAAAQERWRS------- 42 usage_00190.pdb 1 -PEFRALEGAWAEGVVAMARAG-ARI-IIDDVFLGGAAAQERWRSFVG---- 45 usage_00191.pdb 1 GPEFRALEGAWAEGVVAMARAG-ARI-IIDDVFLGGAAAQERWRSFVG---- 46 alegawaegvvamarag ari iIddvfl gaaAqerwRs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################