################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:03 2021 # Report_file: c_1151_93.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00322.pdb # 2: usage_00397.pdb # 3: usage_00512.pdb # 4: usage_00638.pdb # 5: usage_00639.pdb # 6: usage_00640.pdb # 7: usage_00641.pdb # 8: usage_00642.pdb # 9: usage_00643.pdb # 10: usage_00644.pdb # 11: usage_00960.pdb # 12: usage_00961.pdb # 13: usage_00992.pdb # 14: usage_01213.pdb # 15: usage_01214.pdb # 16: usage_01508.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 56 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 56 ( 80.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 -----------------RFRDMLPQQNIDRAGI-------K-NRVYSNSVYEILEN 31 usage_00397.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNS------- 26 usage_00512.pdb 1 ---------------NIRFLDKLPQQTGDRAGI-------K-DRVYSNSIYELLEN 33 usage_00638.pdb 1 ---------------NIRFLDKLPQQTGDHAGI-------K-DRVYSNSIYELLEN 33 usage_00639.pdb 1 ---------------NIRFLDKLPQQTGDHAGI-------K-DRVYSNSIYELLE- 32 usage_00640.pdb 1 ---------------NIRFLDKLPQQTGDHAGI-------K-DRVYSNSIYELLEN 33 usage_00641.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNSVYEILEN 33 usage_00642.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNSVYEILEN 33 usage_00643.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNSVYEILEN 33 usage_00644.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNSVYEILEN 33 usage_00960.pdb 1 ---------------RITFEGNTEPLEKTRGGV-------F-LRHYKHSVYEIKDG 33 usage_00961.pdb 1 ---------------RITFEGNTEPLEKTRGGV-------F-LRHYKHSVYEIKDG 33 usage_00992.pdb 1 -------------------GIDFREKRVVYD--TQGASGKAFKVHLQLWDTAGL-- 33 usage_01213.pdb 1 ---------------NIRFRDMLPQQNIDRAGI-------K-NRVYSNSVYELLE- 32 usage_01214.pdb 1 -----------------RFLDKLPQQTIDRAGI-------K-DRVYSNSIYELLEN 31 usage_01508.pdb 1 AIKTLQVMKKLRHEKLVQLYAV---VSE--------------EPIYI--VTE---- 33 y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################