################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:27 2021 # Report_file: c_0274_9.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00080.pdb # # Length: 195 # Identity: 72/195 ( 36.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/195 ( 36.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/195 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 PQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSF 60 usage_00007.pdb 1 -QQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSF 59 usage_00008.pdb 1 PQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSF 60 usage_00009.pdb 1 PDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYYEEAEWLAAEYVPTL 60 usage_00080.pdb 1 PDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYYEEAEWLAAEYVPTL 60 MK C Y A E QGR W L Y EAEW A YVP usage_00006.pdb 61 NEYIENASVSIALGTVVLISALFTGEV-LTDEVLSKI-DRES-RFLQLMGLTGRLVNDTK 117 usage_00007.pdb 60 NEYIENASVSIALGTVVLISALFTGEV-LTDEVLSKI-DRES-RFLQLMGLTGRLVNDTK 116 usage_00008.pdb 61 NEYIENASVSIALGTVVLISALFTGEV-LTDEVLSKI-DRES-RFLQLMGLTGRLVNDTK 117 usage_00009.pdb 61 DEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTK 120 usage_00080.pdb 61 DEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTK 120 EYI N SI L L L E L K L L RL DTK usage_00006.pdb 118 TYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYK 176 usage_00007.pdb 117 TYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYK 175 usage_00008.pdb 118 TYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYK 176 usage_00009.pdb 121 TYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACK 180 usage_00080.pdb 121 TYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACK 180 TY AE GE AS I CYMKDHP EEEAL H YS E A EL REF P K usage_00006.pdb 177 RLV------------ 179 usage_00007.pdb 176 RLV------------ 178 usage_00008.pdb 177 RLV------------ 179 usage_00009.pdb 181 KMLFEETRVTMVIFK 195 usage_00080.pdb 181 KMLFEETRVTMVIFK 195 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################