################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:16 2021 # Report_file: c_0484_23.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00031.pdb # 2: usage_00092.pdb # 3: usage_00093.pdb # 4: usage_00159.pdb # 5: usage_00247.pdb # 6: usage_00261.pdb # # Length: 100 # Identity: 5/100 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/100 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/100 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 -TSILLLHGSGPGANAMSNWQYALPFLAE-NYHCLAPDIAGFGLS---QHNCPPNG--TS 53 usage_00092.pdb 1 -ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKS---D--AVVMD--E- 51 usage_00093.pdb 1 -ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKS---D--AVVMD--E- 51 usage_00159.pdb 1 -ETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS---D--SVVNS--G- 51 usage_00247.pdb 1 GRTILL-H--GKNF-CAGTWERTIDVLADAGYRVIAVDQVGFCKS---S--KPA-HYQY- 49 usage_00261.pdb 1 -TPIVILH--GLMG-GLSNFDGVIDYFPEKGYKVLIPELPL----YSMS--LL----KT- 45 H G n gY v d g usage_00031.pdb 54 HWIDIWVQQQIDLLDAKGIEQTHIVGNSMGGGVTLHLLNR 93 usage_00092.pdb 52 QRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFAL- 90 usage_00093.pdb 52 QRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALE 91 usage_00159.pdb 52 SRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLK 91 usage_00247.pdb 50 -SFQQLAANTHALLERLGVARASVIGHSG-G-LATRYALL 86 usage_00261.pdb 46 -SVGTFARYLKEFVDFKGYENVILLGNSLGGHIALLATKM 84 a d Gn G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################