################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:07 2021 # Report_file: c_0427_2.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00019.pdb # 5: usage_00026.pdb # 6: usage_00032.pdb # 7: usage_00033.pdb # 8: usage_00034.pdb # 9: usage_00036.pdb # 10: usage_00037.pdb # 11: usage_00038.pdb # 12: usage_00041.pdb # 13: usage_00047.pdb # 14: usage_00051.pdb # 15: usage_00054.pdb # 16: usage_00065.pdb # 17: usage_00066.pdb # 18: usage_00067.pdb # 19: usage_00070.pdb # 20: usage_00072.pdb # # Length: 83 # Identity: 4/ 83 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 83 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 83 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCVQAER---LR--------- 48 usage_00008.pdb 1 SHTYYRNSVKGRFTISRDNAKNTVYLQMNNMKPEDTAVYYCAAGDN-Y-YY--------- 49 usage_00009.pdb 1 SHTYYRNSVKGRFTISRDNAKNTVYLQMNNMKPEDTAVYYCAAGDN-Y-YY--------- 49 usage_00019.pdb 1 -YTYYPGSVKGRFSISRDNARNTLNLQMSSLRSEDTALYFCARQGT-A-AQ--P------ 49 usage_00026.pdb 1 AGTYYASSVRGRFTISRDNAKKTVYLQMNSLKPEDTAVYTCGAGRI-------------- 46 usage_00032.pdb 1 VKTAYADSVKDRFTISRDNAENTVYLQMNSLKPEDTAIYYCAAKFS-P-G---YC-G--- 51 usage_00033.pdb 1 -ITYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST-IYAS--YYECGHG 56 usage_00034.pdb 1 GNLQIGDVP-DGYKATRTT-QEDFFLLLELASPSQTSLYFCASSDA-P-G---------- 46 usage_00036.pdb 1 TSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQ-R-TR--L------ 50 usage_00037.pdb 1 TSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQ-R-TR--L------ 50 usage_00038.pdb 1 --PSIHKDYVNRLFLNWTEGQESGFLRISNLRKEDQSVYFCRVELDTR-RSG-------- 49 usage_00041.pdb 1 -ATAYLASVKGRFTISRDDSKDTTFLEMSSLKIEDTAVYYCIASSTTG-W-YV-R----- 51 usage_00047.pdb 1 -RTTYADSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCNAASL---VR--------- 47 usage_00051.pdb 1 -STMYPDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYYQRT-V-M---------- 47 usage_00054.pdb 1 -YAFYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAVYYVAADLK-M-QV--AAY---- 51 usage_00065.pdb 1 TSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQ-R-TR--L------ 50 usage_00066.pdb 1 TSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQ-R-TR--L------ 50 usage_00067.pdb 1 TSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQ-R-TR--L------ 50 usage_00070.pdb 1 DSTNYADSVKGRFTISRDSAKNTVYLQMNSLKPEDTAVYYCNADARTI--TG-------- 50 usage_00072.pdb 1 YYAFYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAVYYCAADLK-M-QV--AAY---- 52 r L edt Y c usage_00001.pdb 49 -----R-TFDYW-GAGTTVTV-- 62 usage_00008.pdb 50 ---TRTYEYDYW-GQGTQVTVS- 67 usage_00009.pdb 50 ---TRTYEYDYW-GQGTQVTVS- 67 usage_00019.pdb 50 ---Y-W-YFDVW-GAGTTVTV-- 64 usage_00026.pdb 47 -----ESWVTWW-GQGTQVTVS- 62 usage_00032.pdb 52 ---GSWSNFGYW-GQGTQVTVS- 69 usage_00033.pdb 57 LSTG-GYGYDSW-GQGTQVTVSS 77 usage_00034.pdb 47 -------Q-LYF-GEGSKLTVL- 59 usage_00036.pdb 51 ---QDPNEYDYW-GQGTQVTVS- 68 usage_00037.pdb 51 ---QDPNEYDYW-GQGTQVTV-- 67 usage_00038.pdb 50 -------RQQWQSIKGTKLTI-- 63 usage_00041.pdb 52 -----E-DFDYW-GHGTLVTV-- 65 usage_00047.pdb 48 -----G-PLDHW-GQGTQVTVS- 62 usage_00051.pdb 48 -----S-Q-PYW-GQGTQVTVS- 61 usage_00054.pdb 52 ---MNQRSVDYW-GQGTQVTVS- 69 usage_00065.pdb 51 ---QDPNEYDYW-GQGTQVTV-- 67 usage_00066.pdb 51 ---QDPNEYDYW-GQGTQVTVSS 69 usage_00067.pdb 51 ---QDPNEYDYW-GQGTQVTVS- 68 usage_00070.pdb 51 -------RADYW-GQGTQVTVS- 64 usage_00072.pdb 53 ---MNQRSVDYW-GQGTQVTVS- 70 g Gt Tv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################