################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:39 2021 # Report_file: c_1363_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00258.pdb # 2: usage_00259.pdb # 3: usage_00260.pdb # 4: usage_00261.pdb # # Length: 61 # Identity: 50/ 61 ( 82.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 61 ( 82.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 61 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 --DVLTKYKTAAQISEKVLAEVSKLCVPGAKIIDICEQGDKLMEEELSKVYRDKKTNKGF 58 usage_00259.pdb 1 SVDVLTKYKTAAQISEKVLAEVSKLCVPGAKIIDICEQGDKLMEEELSKVYRKTNKG--- 57 usage_00260.pdb 1 SVDVLTKYKTAAQISEKVLAEVSKLCVPGAKIIDICEQGDKLMEEELSKVYRDKKTNKGF 60 usage_00261.pdb 1 --DVLTKYKTAAQISEKVLAEVSKLCVPGAKIIDICEQGDKLMEEELSKVYRKTNKG--- 55 DVLTKYKTAAQISEKVLAEVSKLCVPGAKIIDICEQGDKLMEEELSKVYR usage_00258.pdb - usage_00259.pdb 58 F 58 usage_00260.pdb - usage_00261.pdb 56 F 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################