################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:01 2021 # Report_file: c_0447_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00071.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00161.pdb # 6: usage_00162.pdb # 7: usage_00163.pdb # 8: usage_00164.pdb # 9: usage_00165.pdb # 10: usage_00166.pdb # # Length: 109 # Identity: 98/109 ( 89.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 98/109 ( 89.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/109 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 60 usage_00072.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 59 usage_00073.pdb 1 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 60 usage_00074.pdb 1 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 60 usage_00161.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVE-VTERHPYKHPNIPNVVFWD 58 usage_00162.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVE-VTERHPYKHPNIPNVVFWD 58 usage_00163.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVE-VTERHPYKHPNIPNVVFWD 58 usage_00164.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVE-VTERHPYKHPNIPNVVFWD 58 usage_00165.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGV---VTERHPYKHPNIPNVVFWD 56 usage_00166.pdb 1 -SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVE-VTERHPYKHPNIPNVVFWD 58 SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGV ERHPYKHPNIPNVVFWD usage_00071.pdb 61 LPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMK 109 usage_00072.pdb 60 LPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMK 108 usage_00073.pdb 61 LPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMK 109 usage_00074.pdb 61 LPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM-- 107 usage_00161.pdb 59 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAISK-- 104 usage_00162.pdb 59 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAIS--- 103 usage_00163.pdb 59 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAIS--- 103 usage_00164.pdb 59 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAIS--- 103 usage_00165.pdb 57 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAIS--- 101 usage_00166.pdb 59 LPGIGSTNFPPNTYLEK-KFYEYDFFIIISATRFKKNDIDIAKAIS--- 103 LPGIGSTNFPP TYLEK KFYEYDFFIIISATRFKKNDIDIAKAIS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################