################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:40 2021 # Report_file: c_1115_122.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00286.pdb # 2: usage_00453.pdb # 3: usage_00927.pdb # 4: usage_01622.pdb # 5: usage_01631.pdb # # Length: 88 # Identity: 1/ 88 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 88 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 88 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00286.pdb 1 QEEEKQAIPEFF--E-GRQAKTPERYLKIRNYILDQWEICKPKYL------NKTSVRPGL 51 usage_00453.pdb 1 HSIEVQSLPEFF--TNRIPSKTPEVYMRYRNFMVNSYRLNPNEYF------SVTTARRNV 52 usage_00927.pdb 1 TSQEAACFPDII--S-GPQQ-TQKVFLFIRNRTLQLWLDNPKIQL------TFEATLQQL 50 usage_01622.pdb 1 TSQEAACFPDII--S-GPQQ-TQKVFLFIRNRTLQLWLDNPKIQL------TFEATLQQL 50 usage_01631.pdb 1 --TIEEFATYLELEG-KSRN-TVRMYTYYISKFFEEG--------HSPTARDALRFLAKL 48 e p T rn l usage_00286.pdb 52 K-------NCGDVNCIGRIHTYLELIG- 71 usage_00453.pdb 53 --------S-GDAAALFRLHKFLTKWG- 70 usage_00927.pdb 51 E----APYNS-DTVLVHRVHSYLERHG- 72 usage_01622.pdb 51 E----APYNS-DTVLVHRVHSYLERHG- 72 usage_01631.pdb 49 KRKGYSTR---SLNLVIQALKAYFKFEG 73 d r h l g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################