################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:23 2021 # Report_file: c_0691_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00031.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00054.pdb # 5: usage_00567.pdb # 6: usage_00721.pdb # 7: usage_00758.pdb # 8: usage_00962.pdb # # Length: 60 # Identity: 6/ 60 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 60 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 60 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 ---NSVSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 52 usage_00034.pdb 1 -----VSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 50 usage_00035.pdb 1 ---NSVSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 52 usage_00054.pdb 1 ----SVSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 51 usage_00567.pdb 1 YAKITVDIGS-ASQLEAAFNDGNNNWDSNNTKNYLFST-GTS-TYTPGSNG-A-AGTIRT 55 usage_00721.pdb 1 ---NSVSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 52 usage_00758.pdb 1 -----VSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 50 usage_00962.pdb 1 ---NSVSVDLPGSMKVLVSKS-SN----ADGKYDLIATVDALELSGTSDKNNGSGVLEGV 52 Vsvdl gSmkvlvsks sN adgKydLiaT dal lsgtsdkn g gvlegv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################