################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:18 2021 # Report_file: c_0378_21.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00574.pdb # 2: usage_00575.pdb # 3: usage_00576.pdb # 4: usage_00578.pdb # 5: usage_00800.pdb # 6: usage_00806.pdb # 7: usage_00808.pdb # 8: usage_00811.pdb # 9: usage_00814.pdb # # Length: 108 # Identity: 76/108 ( 70.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/108 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/108 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00574.pdb 1 -SYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 59 usage_00575.pdb 1 -SYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 59 usage_00576.pdb 1 -SYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 59 usage_00578.pdb 1 QSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 60 usage_00800.pdb 1 ------------KALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 48 usage_00806.pdb 1 QSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 60 usage_00808.pdb 1 QSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 60 usage_00811.pdb 1 QSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 60 usage_00814.pdb 1 QSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA 60 KALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDA usage_00574.pdb 60 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLN------- 100 usage_00575.pdb 60 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLN------- 100 usage_00576.pdb 60 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLN------- 100 usage_00578.pdb 61 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLN------- 101 usage_00800.pdb 49 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGN 96 usage_00806.pdb 61 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIE----- 103 usage_00808.pdb 61 SYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIE----- 103 usage_00811.pdb 61 SYQSINIPVTQNMVPSSRLLVYYIVTGE-------------------- 88 usage_00814.pdb 61 SYQSINIPVTQNMVPSSRLLVYYIVTGE-------------------- 88 SYQSINIPVTQNMVPSSRLLVYYIVTGE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################