################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:11 2021 # Report_file: c_0146_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00101.pdb # 2: usage_00132.pdb # 3: usage_00133.pdb # 4: usage_00171.pdb # 5: usage_00202.pdb # 6: usage_00203.pdb # 7: usage_00204.pdb # 8: usage_00237.pdb # 9: usage_00240.pdb # # Length: 119 # Identity: 51/119 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/119 ( 47.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/119 ( 12.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 IQVEQSPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQLINLFYIPSGTKQNGRLSA 60 usage_00132.pdb 1 --VEQSPSALSLHEGTGSALRCNFTTTMRAVQWFRKNSRGSLINLFYLASGTKENGRLKS 58 usage_00133.pdb 1 --VEQSPSALSLHEGTGSALRCNFTTTMRAVQWFRKNSRGSLINLFYLASGTKENGRLKS 58 usage_00171.pdb 1 IQVEQSPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQLINLFYIPSGTKQNGRLSA 60 usage_00202.pdb 1 -QVEQSPSALSLHEGTGSALRCNFTTTMRAVQWFQQNSRGSLINLFYLASGTKENGRLKS 59 usage_00203.pdb 1 --VEQSPSALSLHEGTGSALRCNFTTTMRAVQWFRKN-RGSLINLFYLASGTKENGRLKS 57 usage_00204.pdb 1 --VEQSPSALSLHEGTGSALRCNFTTTMRAVQWFRKN-RGSLINLFYLASGTKENGRLKS 57 usage_00237.pdb 1 --VEQSPSALSLHEGTGSALRCNFTTTMRAVQWFRKNSRGSLINLFYLASGTKENGRLKS 58 usage_00240.pdb 1 -QVEQSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKS 59 VEQSP L L EG S LRCNF QWF N G LInLFY SGTK NGRL usage_00101.pdb 61 TTVATER-YSLLYISSSQTTDSGVYFCAALIQG--------AQ--KLVFGQGTRLTINP 108 usage_00132.pdb 59 AFDSKER-YSTLHIRDAQLEDSGTYFCAAEASN--------TN--KVVFGTGTRLQVLP 106 usage_00133.pdb 59 AFDSKER-YSTLHIRDAQLEDSGTYFCAAEASN--------TN--KVVFGTGTRLQVLP 106 usage_00171.pdb 61 TTVATER-YSLLYISSSQTTDSGVYFCAVDSAT--------SGTYKYIFGTGTRLKVL- 109 usage_00202.pdb 60 TFNSKES-YSTLHIRDAQLEDSGTYFCAALRAT--------NN--KLTFGQGTVLSVIP 107 usage_00203.pdb 58 AFDSKER-YSTLHIRDAQLEDSGTYFCAAEASN--------TN--KVVFGTGTRLQVLP 105 usage_00204.pdb 58 AFDSKER-YSTLHIRDAQLEDSGTYFCAAEASN--------TN--KVVFGTGTRLQVLP 105 usage_00237.pdb 59 AFDSKER-YSTLHIRDAQLEDSGTYFCAAEASN--------TN--KVVFGTGTRLQVLP 106 usage_00240.pdb 60 AFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTD--KLVFGQGTQVTVEP 116 Er YS L I Q DSG YFCAa K FG GT l v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################