################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:46 2021 # Report_file: c_1489_55.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00927.pdb # 2: usage_00988.pdb # 3: usage_00989.pdb # 4: usage_00990.pdb # 5: usage_01050.pdb # 6: usage_02126.pdb # 7: usage_02127.pdb # 8: usage_02461.pdb # 9: usage_03194.pdb # 10: usage_03809.pdb # 11: usage_04309.pdb # 12: usage_04325.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 55 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 55 ( 85.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00927.pdb 1 ------NQVKTLISEALVNN-RDLRMATL------KVQEARA---QYR------- 32 usage_00988.pdb 1 ------SPQSKDLIKEAILD-ND-FMKNLE--LSQIQEIVD-------------- 31 usage_00989.pdb 1 ------SPQSKDLIKEAILD-ND-FMKNLE--LSQIQEIVDC------------- 32 usage_00990.pdb 1 ------SPQSKDLIKEAILD-ND-FMKNLE--LSQIQEIVDCM------------ 33 usage_01050.pdb 1 SQEQRNQTIECLVNVLVHYGIQRPKEL---------SSCF--------------- 31 usage_02126.pdb 1 ------DSSEKKLITDALNK-NQ-FLKRLD--PQQIKDMVECM------------ 33 usage_02127.pdb 1 -------SSEKKLITDALNK-NQ-FLKRLD--PQQIKDMVECM------------ 32 usage_02461.pdb 1 ------------P--------AE-FLHAAKEA-GLAEKIDRWVILNSIKLLAEHR 33 usage_03194.pdb 1 ------SPQSKDLIKEAILD-ND-FMKNLE--LSQIQEIVDC------------- 32 usage_03809.pdb 1 ------SERSKDLIKEAILD-ND-FMKNLE--LSQIQEIVDC------------- 32 usage_04309.pdb 1 ------SPQSKDLIKEAILD-ND-FMKNLE--LSQIQEIVDC------------- 32 usage_04325.pdb 1 ----------------------Q-DTLDLT--REEELSLLQEIRTSL-------- 22 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################