################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:25 2021 # Report_file: c_1263_97.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00035.pdb # 2: usage_00143.pdb # 3: usage_00296.pdb # 4: usage_00320.pdb # 5: usage_00338.pdb # 6: usage_00369.pdb # 7: usage_00393.pdb # 8: usage_00425.pdb # 9: usage_00606.pdb # 10: usage_00616.pdb # 11: usage_00850.pdb # 12: usage_00851.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 30 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 30 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -TYENVPYNNEWALQTAVTYQP--VSVA-- 25 usage_00143.pdb 1 -GSHM-TPKDDEFYQQWQLKYPKLILRE-- 26 usage_00296.pdb 1 -SYEHVPRNNENALKNAVANQP--VSVT-- 25 usage_00320.pdb 1 -GVRQVQPYNQGALLYSIANQP--VSVVLQ 27 usage_00338.pdb 1 -V-KI--VTSQAEFDSIISQNEL-VIVD-- 23 usage_00369.pdb 1 -A-FL--PETSDALADWYLAHPE-ATLIAG 25 usage_00393.pdb 1 TGYQDVPANNEQALQQAAATQP--ISVA-- 26 usage_00425.pdb 1 -CFKP--VDSHEARQKIIQNPQP-CVIL-A 25 usage_00606.pdb 1 -TYENVPYNNEWALQTAVTYQP--VSVA-- 25 usage_00616.pdb 1 -GVRQVQPYNEGALLYSIANQP--VSVVLE 27 usage_00850.pdb 1 -GYKYVPANDEISLIQAIANQP--VSVVTD 27 usage_00851.pdb 1 -GYKYVPANDEISLIQAIANQP--VSVVTD 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################