################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:11 2021 # Report_file: c_1484_337.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00226.pdb # 2: usage_02700.pdb # 3: usage_03439.pdb # 4: usage_03626.pdb # # Length: 49 # Identity: 6/ 49 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 49 ( 40.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 49 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00226.pdb 1 NMEDVGKIAREFVGAANTLAEVAATGEAEAVKTAFGDVGAACKSCHEKY 49 usage_02700.pdb 1 -KAKFDDLFAKLAAAATAAQGTI-K-DEASLKANIGGVLGNCKSCHDD- 45 usage_03439.pdb 1 --ADFDSKMTAFQDNAAALAVAAKSSDQNNIKQAFANTGKSCKGCHDV- 46 usage_03626.pdb 1 --ADFDSKMTAFQDNAAALAVAAKSSDQNNIKQAFANTGKSCKGCHDV- 46 adfd f A ala a d K af g CK CHd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################