################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:23 2021 # Report_file: c_0165_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00147.pdb # 4: usage_00148.pdb # 5: usage_00149.pdb # 6: usage_00150.pdb # # Length: 147 # Identity: 104/147 ( 70.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 126/147 ( 85.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/147 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 PVSYTRKDSIAVIS-DDGKVNALGPA-QQALNAAIDNADRDDVGALVITGNGRVFSGGFD 58 usage_00005.pdb 1 PVSYTRKDSIAVIS-DDGKVNALGPA-QQALNAAIDNADRDDVGALVITGNGRVFSGGFD 58 usage_00147.pdb 1 PVTYTHDDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRDNVGALVIAGNHRVFSGGFD 60 usage_00148.pdb 1 PVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFD 60 usage_00149.pdb 1 PVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFD 60 usage_00150.pdb 1 PVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFD 60 PVsYTrkDsIaVIs DDGKVNaLGPa QQALNaAIDnADRDdVGALVItGNgRVFSGGFD usage_00004.pdb 59 LKILTSGEVQPAID-LRGGFELAYRLLSYPKPVVA-CTGH-AIAGAFLLSCGDHRVAAHA 115 usage_00005.pdb 59 LKILTSGEVQPAID-LRGGFELAYRLLSYPKPVVA-CTGH-AIAGAFLLSCGDHRVAAHA 115 usage_00147.pdb 61 LKVLT---AKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHA 117 usage_00148.pdb 61 LKILT---VQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHA 117 usage_00149.pdb 61 LKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHA 120 usage_00150.pdb 61 LKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHA 120 LKiLT vqPAID LRGGFELaYRLLSYPKPVV CTGH GAFLLscGDHRVAAHA usage_00004.pdb 116 YNIQANEVAIGTI-PYAALEIKL-R-L 139 usage_00005.pdb 116 YNIQANEVAIGTI-PYAALEIKL-R-L 139 usage_00147.pdb 118 YNVQANEVAIGMTIPYAAMEVLKL--- 141 usage_00148.pdb 118 YNIQANEVAIGMTIPYAALEIMKLRL- 143 usage_00149.pdb 121 YNIQANEVAIGMTIPYAALEIMKLRL- 146 usage_00150.pdb 121 YNIQANEVAIGMTIPYAALEIMKLRL- 146 YNiQANEVAIG PYAAlEi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################