################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:32:16 2021 # Report_file: c_0863_94.html ################################################################################################ #==================================== # Aligned_structures: 59 # 1: usage_00107.pdb # 2: usage_00108.pdb # 3: usage_00109.pdb # 4: usage_00110.pdb # 5: usage_00112.pdb # 6: usage_00235.pdb # 7: usage_00236.pdb # 8: usage_00237.pdb # 9: usage_00238.pdb # 10: usage_00239.pdb # 11: usage_00377.pdb # 12: usage_00429.pdb # 13: usage_00449.pdb # 14: usage_00450.pdb # 15: usage_00451.pdb # 16: usage_00481.pdb # 17: usage_00526.pdb # 18: usage_00747.pdb # 19: usage_00770.pdb # 20: usage_00777.pdb # 21: usage_00820.pdb # 22: usage_00821.pdb # 23: usage_00822.pdb # 24: usage_00823.pdb # 25: usage_00824.pdb # 26: usage_00825.pdb # 27: usage_00826.pdb # 28: usage_00827.pdb # 29: usage_00828.pdb # 30: usage_00829.pdb # 31: usage_00830.pdb # 32: usage_00831.pdb # 33: usage_00832.pdb # 34: usage_00833.pdb # 35: usage_00834.pdb # 36: usage_00835.pdb # 37: usage_00836.pdb # 38: usage_00856.pdb # 39: usage_00857.pdb # 40: usage_00979.pdb # 41: usage_00980.pdb # 42: usage_00982.pdb # 43: usage_01187.pdb # 44: usage_01188.pdb # 45: usage_01255.pdb # 46: usage_01256.pdb # 47: usage_01268.pdb # 48: usage_01269.pdb # 49: usage_01334.pdb # 50: usage_01339.pdb # 51: usage_01352.pdb # 52: usage_01377.pdb # 53: usage_01378.pdb # 54: usage_01379.pdb # 55: usage_01380.pdb # 56: usage_01387.pdb # 57: usage_01388.pdb # 58: usage_01389.pdb # 59: usage_01390.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 61 ( 9.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 61 ( 37.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 ----LVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 54 usage_00108.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00109.pdb 1 -RLNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 57 usage_00110.pdb 1 --LNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 56 usage_00112.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00235.pdb 1 TRLDLVSKNLKIFKSIVGEVMASKF-DGIFLVATNPVDILAYATWKFSGLPKERVIGSG- 58 usage_00236.pdb 1 TRLDLVSKNLKIFKSIVGEVMASKF-DGIFLVATNPVDILAYATWKFSGLPKERVIGSG- 58 usage_00237.pdb 1 -RLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 57 usage_00238.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00239.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00377.pdb 1 SRLNLVQRNVNVFKFIIPQIVKYSP-DCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSG- 58 usage_00429.pdb 1 TRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAANPVDILTYATWKLSGFPKNRVVGS-- 57 usage_00449.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00450.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00451.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00481.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGS-- 57 usage_00526.pdb 1 SREDLIKVNADITRACISQAAPLSP-NAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQA- 58 usage_00747.pdb 1 TRLDLVDKNIAIFRSIVESVMASGF-QGLFLVATNPVDILTYATWKFSGLPHERVIGS-- 57 usage_00770.pdb 1 SRLELVGATVNILKAIMPNLVKVAP-NAIYMLITNPVDIATHVAQKLTGLPENQIFGSGT 59 usage_00777.pdb 1 TRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLVATNPVDVMTQVAYRLSGLPPGRVVGS-- 57 usage_00820.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00821.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00822.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGS-- 57 usage_00823.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00824.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00825.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00826.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00827.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00828.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00829.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00830.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00831.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00832.pdb 1 ------QRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 52 usage_00833.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00834.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00835.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00836.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00856.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00857.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00979.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGS-- 57 usage_00980.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00982.pdb 1 -RLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 57 usage_01187.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGS-- 57 usage_01188.pdb 1 --LNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGS-- 55 usage_01255.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01256.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-HCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01268.pdb 1 SRLNLVQRNVNIFKFIIPNIVKYSP-NCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01269.pdb 1 SRLNLVQRNVNIFKFIIPNIVKYSP-NCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01334.pdb 1 -----------DRVGLLRDAV---APDTGIVLISNG-IDIEPEVAAAFPDN----EVISG 41 usage_01339.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01352.pdb 1 SREDLIKVNADITRACISQAAPLSP-NAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQA- 58 usage_01377.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01378.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01379.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01380.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-NCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01387.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01388.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01389.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_01390.pdb 1 ------QRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 52 Np d g p g usage_00107.pdb - usage_00108.pdb - usage_00109.pdb - usage_00110.pdb - usage_00112.pdb - usage_00235.pdb - usage_00236.pdb - usage_00237.pdb - usage_00238.pdb - usage_00239.pdb - usage_00377.pdb - usage_00429.pdb - usage_00449.pdb - usage_00450.pdb - usage_00451.pdb - usage_00481.pdb - usage_00526.pdb - usage_00747.pdb - usage_00770.pdb - usage_00777.pdb - usage_00820.pdb - usage_00821.pdb - usage_00822.pdb - usage_00823.pdb - usage_00824.pdb - usage_00825.pdb - usage_00826.pdb - usage_00827.pdb - usage_00828.pdb - usage_00829.pdb - usage_00830.pdb - usage_00831.pdb - usage_00832.pdb - usage_00833.pdb - usage_00834.pdb - usage_00835.pdb - usage_00836.pdb - usage_00856.pdb - usage_00857.pdb - usage_00979.pdb - usage_00980.pdb - usage_00982.pdb - usage_01187.pdb - usage_01188.pdb - usage_01255.pdb - usage_01256.pdb - usage_01268.pdb - usage_01269.pdb - usage_01334.pdb 42 L 42 usage_01339.pdb - usage_01352.pdb - usage_01377.pdb - usage_01378.pdb - usage_01379.pdb - usage_01380.pdb - usage_01387.pdb - usage_01388.pdb - usage_01389.pdb - usage_01390.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################