################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:48 2021 # Report_file: c_0212_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00055.pdb # 4: usage_00076.pdb # 5: usage_00078.pdb # 6: usage_00203.pdb # 7: usage_00236.pdb # 8: usage_00334.pdb # 9: usage_00387.pdb # # Length: 105 # Identity: 37/105 ( 35.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/105 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/105 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITSD-YAWNWIRQFPGNKLEWMGYISY--SGT 56 usage_00008.pdb 1 EVQLQESGPGLVKPSQSLSLTCTVTGYSITSD-YAWNWIRQFPGNKLEWMGYISY--SGT 57 usage_00055.pdb 1 -VQLQESGPSLVKPSQSLSLTCTVTGYSITSD-FAWNWIRQFPGNKLEWMGYISY--SGN 56 usage_00076.pdb 1 QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWF 60 usage_00078.pdb 1 DVQLQQSGPDLVKPSQSLSLTCTVTGYSITSG-YSWHWIRQFPGNKLEWMGYIHY--SAG 57 usage_00203.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGFSITSP-YAWNWIRQFPGNTLEWMGYISY--RGS 56 usage_00236.pdb 1 DVQLQESGPGLVKPSQSLSLTCTVTGYSITST-YDWHWIRHFPGNILEWMGYISY--SGS 57 usage_00334.pdb 1 --LLEQSGPSLVKPSQTLSLTCSVTGDSIT-S-GYWNWIRKFPGNKLEYMGYISY--SGS 54 usage_00387.pdb 1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSG-YSWNWIRQAPGKGLEWVASITY--DGS 57 qL SGp LVkPsq LsLtC v G Sit W WIR Pg LEw g i Y usage_00007.pdb 57 TSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCGRTGVY 101 usage_00008.pdb 58 TSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCGRTGVY 102 usage_00055.pdb 57 TRYNPSLKSRISITRDTSKNQFFLQLNSVTIEDTATYYCVTAG-- 99 usage_00076.pdb 61 NDYAVSVQSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA----- 100 usage_00078.pdb 58 TNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAREEA- 101 usage_00203.pdb 57 TTYHPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYFCSSYG-- 99 usage_00236.pdb 58 TNYNPSLKSRISITHDTSKNRFFLKLNSVTSEDTATYYCARATAS 102 usage_00334.pdb 55 TYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALITT- 98 usage_00387.pdb 58 TNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSHY 102 t Y S sRI I DtSKN f LqlNSvt EDTA YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################