################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:35 2021 # Report_file: c_1384_36.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00176.pdb # 2: usage_00251.pdb # 3: usage_00252.pdb # 4: usage_00253.pdb # # Length: 87 # Identity: 4/ 87 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 87 ( 17.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 87 ( 44.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 DADEIKRLGKRFKKLDLDNS----GSL----SVEEFMSL--PELQQ-NPL--VQRVIDIF 47 usage_00251.pdb 1 -EEQKNEFKAAFDIFVL---GAEDGSISTKELGKVMRMLGQNP--TP---EELQEMIDEV 51 usage_00252.pdb 1 -EQKNEFKAAFDIFVL----GAEDGSIST-KELGKVMRMLGQN--PT---PEELQEMIDE 49 usage_00253.pdb 1 ---SEEEIREAFRVFDKDGN----GYISA-AELRHVMTN-LGEK--LTDE-EVDEMIREA 48 f Gsi m i usage_00176.pdb 48 D---TDGNGEVDFKEFIEG-------- 63 usage_00251.pdb 52 D---EDGSGTVDFDEFLVMMVRSMK-- 73 usage_00252.pdb 50 VDEDGSGTV--DFDEFLVM---MVRSM 71 usage_00253.pdb 49 D---IDGDGQVNYEEFVQM---M-T-- 66 d dG g df EF m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################