################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:53 2021 # Report_file: c_0402_7.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00029.pdb # 6: usage_00030.pdb # 7: usage_00042.pdb # 8: usage_00043.pdb # 9: usage_00044.pdb # 10: usage_00045.pdb # 11: usage_00046.pdb # 12: usage_00047.pdb # 13: usage_00048.pdb # 14: usage_00052.pdb # 15: usage_00067.pdb # 16: usage_00068.pdb # # Length: 70 # Identity: 51/ 70 ( 72.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 70 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 70 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 60 usage_00002.pdb 1 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 60 usage_00003.pdb 1 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 60 usage_00004.pdb 1 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 60 usage_00029.pdb 1 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 60 usage_00030.pdb 1 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 60 usage_00042.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00043.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00044.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00045.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00046.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00047.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00048.pdb 1 GDINTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPSGVLDPSE 60 usage_00052.pdb 1 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 60 usage_00067.pdb 1 --INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 58 usage_00068.pdb 1 --INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKE 58 I TQP KIVFNAPYDDKHTYHIK N RRIG IKTTNM RL VDPP GVLDP E usage_00001.pdb 61 KVLMAVSCD- 69 usage_00002.pdb 61 KVLMAVSCDT 70 usage_00003.pdb 61 KVLMAVSCD- 69 usage_00004.pdb 61 KVLMAVSCD- 69 usage_00029.pdb 61 AVLLAVSCD- 69 usage_00030.pdb 61 AVLLAVSCD- 69 usage_00042.pdb 61 KVLMAVSCD- 69 usage_00043.pdb 61 KVLMAVSCD- 69 usage_00044.pdb 61 KVLMAVSCD- 69 usage_00045.pdb 61 KVLMAVSCD- 69 usage_00046.pdb 61 KVLMAVSCD- 69 usage_00047.pdb 61 KVLMAVSCD- 69 usage_00048.pdb 61 KVLMAVSCD- 69 usage_00052.pdb 61 KVLMAVSCD- 69 usage_00067.pdb 59 KVLMAVSCD- 67 usage_00068.pdb 59 KVLMAVSCD- 67 VL AVSCD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################