################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:28 2021 # Report_file: c_1493_206.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00052.pdb # 2: usage_00692.pdb # 3: usage_00693.pdb # 4: usage_00815.pdb # 5: usage_01267.pdb # 6: usage_01439.pdb # 7: usage_01458.pdb # 8: usage_01588.pdb # 9: usage_01689.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 41 ( 75.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 E-SVFRFGADVRA-GDD-PRE-AQRRL-------IRD---- 26 usage_00692.pdb 1 ---DTVHQ-----LVGGLRAG-MGYCGAQD---LEFLREN- 28 usage_00693.pdb 1 ------HQ-----LVGGLRAG-MGYCGAQD---LEFLREN- 25 usage_00815.pdb 1 D-QFIIAY-----GGLR-GAI-AFSLG-------YLLDK-- 24 usage_01267.pdb 1 AQMSKQLD-----MFKTNLEE-FASKHK------QEIRKN- 28 usage_01439.pdb 1 --MDGYAK-----DAG-----IDPVDAD------LEFLVDN 23 usage_01458.pdb 1 L-STVIHQ-----LVGGLRAA-MGYTGSAT---IEELQQA- 30 usage_01588.pdb 1 -------------WNYNYGPA-GRDIGFNGLADPNRVAQD- 26 usage_01689.pdb 1 L-STVIHQ-----LVGGLRAA-MGYTGSAT---IEELQQA- 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################