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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:22:17 2021
# Report_file: c_0335_5.html
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#====================================
# Aligned_structures: 6
#   1: usage_00012.pdb
#   2: usage_00013.pdb
#   3: usage_00015.pdb
#   4: usage_00017.pdb
#   5: usage_00025.pdb
#   6: usage_00067.pdb
#
# Length:         99
# Identity:       17/ 99 ( 17.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     81/ 99 ( 81.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/ 99 ( 16.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00012.pdb         1  --LVARLA----HVVLRWLPP-PETPMTSHIRYEVDVSAGAG--SV-QRVEILEGRTECV   50
usage_00013.pdb         1  VGLVARLAD--GHVVLRWLPP-PETPMTSHIRYEVDVSAGQG-AGSVQRVEILEGRTECV   56
usage_00015.pdb         1  --LVARLADESGHVVLRWLPP-PETPMTSHIRYEVDVSAG---GSV-QRVEILEGRTECV   53
usage_00017.pdb         1  --LVARLAD-EGHVVLRWLPP-PETPMTSHIRYEVDVSAGGA-GSV-QRVEILEGRTECV   54
usage_00025.pdb         1  --LKVVYRKEANDFLVTFNAPHLKKKYLKKVKHDVAYRPARGESNW-THVSL-F-HTRTT   55
usage_00067.pdb         1  VGLVARLADESGHVVLRWLPP-PETPMTSHIRYEVDVSAGQG--SV-QRVEILEGRTECV   56
                             Lvarla    hvvlrwlpP petpmtshiryeVdvsag       qrVei e rTecv

usage_00012.pdb        51  LS--NLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLL   87
usage_00013.pdb        57  LS--NLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLL   93
usage_00015.pdb        54  LS--NLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLL   90
usage_00017.pdb        55  LS--NLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLL   91
usage_00025.pdb        56  IPQRKLRPKAMYEIKVRSIPHNDYFKGFWSEWSPSSTFE   94
usage_00067.pdb        57  LS--NLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLL   93
                           ls  nLRgrtrYtfaVRarmaepsFgGFWSaWSepvsll


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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