################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:20:26 2021 # Report_file: c_0148_5.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00040.pdb # 2: usage_00048.pdb # 3: usage_00108.pdb # 4: usage_00112.pdb # 5: usage_00156.pdb # 6: usage_00157.pdb # 7: usage_00158.pdb # 8: usage_00193.pdb # 9: usage_00194.pdb # 10: usage_00201.pdb # 11: usage_00204.pdb # 12: usage_00207.pdb # 13: usage_00255.pdb # 14: usage_00271.pdb # 15: usage_00284.pdb # # Length: 113 # Identity: 39/113 ( 34.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/113 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/113 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 --V-MTQSPSSLAMSVGQKVTLSCKSSQSLLNTSNQKNYLAWYQQKPGQSPKLLVYFAST 57 usage_00048.pdb 1 -IV-MTQSPDSLAVSPGERATINCKSSQNLLDSSFDTNTLAWYQQKPGQPPKLLIYWASS 58 usage_00108.pdb 1 ELV-MTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWAST 59 usage_00112.pdb 1 -IV-MTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWAST 58 usage_00156.pdb 1 --Q-MTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSST 57 usage_00157.pdb 1 --Q-MTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSST 57 usage_00158.pdb 1 --Q-MTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSST 57 usage_00193.pdb 1 -IQ-LTQSPSSLAM-G-QKVTMRCKSSQSLLNSRNERNYLAWYQQKPGQSPKLLVYFASI 56 usage_00194.pdb 1 -IQ-LTQSPSSLAMSGGQKVTMRCKSSQSLLNSRNERNYLAWYQQKPGQSPKLLVYFASI 58 usage_00201.pdb 1 -IV-LTQSPASLAVSLGQRATISCRASESVEY-F-GTSLMQWYQQKPGQPPKLLIYAASN 56 usage_00204.pdb 1 -IV-LTQSPSSLAVSLGQRATISCRASESVDS-Y-GNSFMHWYQQKPGQPPKLLIYRASN 56 usage_00207.pdb 1 --V-LTQSPASLAVSLGQRATISCKASQSVDH-D-GDSYMNWFQQKPGQSPKLLIYAASN 55 usage_00255.pdb 1 DIV-MTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWAST 59 usage_00271.pdb 1 -DIVMTQSPDSLAVSLGERATINCKSSQ-----N-NKNYLAWYQQKPGQPPKLLIYWAST 53 usage_00284.pdb 1 --V-MSQSPDSLAVSLGERATINCKSSQSVLYKSDKKNYLAWYQQKSGQPPKLLIYWAST 57 tQSP SLa T C S WyQQKpGQ PK L Y S usage_00040.pdb 58 RESGVPDRFIGSGSGTDFTLTISSVQAEDLSDFFCQQHYSTPYTFGGGTKLEI 110 usage_00048.pdb 59 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGGGTKVEI 111 usage_00108.pdb 60 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEI 112 usage_00112.pdb 59 RESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLEL 111 usage_00156.pdb 58 RESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEI 110 usage_00157.pdb 58 RESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEI 110 usage_00158.pdb 58 RESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEI 110 usage_00193.pdb 57 RESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCLQHYNTPWTFGGGTKLEI 109 usage_00194.pdb 59 RESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCLQHYNTPWTFGGGTKLEI 111 usage_00201.pdb 57 VESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSREVPYTFGGGSKLEI 109 usage_00204.pdb 57 LESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGTKLEI 109 usage_00207.pdb 56 LESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQTNEDPYTFGGGTKLEI 108 usage_00255.pdb 60 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGQGTKVEI 112 usage_00271.pdb 54 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQY----YSFGGGTKVEI 102 usage_00284.pdb 58 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPRTFGQGTKVDI 110 ESG P RF SGSgTDFtL I D a y C q tFG GtK ei #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################