################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:35 2021 # Report_file: c_1481_38.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01000.pdb # 2: usage_01623.pdb # 3: usage_02047.pdb # 4: usage_02768.pdb # 5: usage_03004.pdb # 6: usage_03005.pdb # 7: usage_03006.pdb # 8: usage_03144.pdb # # Length: 73 # Identity: 0/ 73 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 73 ( 1.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/ 73 ( 84.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01000.pdb 1 --------E-YQKFVQGLQENRN-ISLSKYQENKAVDLK-YHLQKVY------------- 36 usage_01623.pdb 1 Q-A------------------------IVERTHQNI-KA-QLNKLQK-AGKYYTPHHLLA 32 usage_02047.pdb 1 ---ERANRKDKIRVLAEGDG---FKRIPTSKQG---E--AKAYA---------------- 33 usage_02768.pdb 1 -PI------------------------AEEHHHHHE-HT-LLTYEQV-AT-QFTPNEQKV 31 usage_03004.pdb 1 --A------------------------IVERTHQNI-KA-QLNKLQK-AGKYYTPHHLLA 31 usage_03005.pdb 1 --A------------------------IVERTHQNI-KA-QLNKLQK-AGKYYTPHHLLA 31 usage_03006.pdb 1 --A------------------------IVERTHQNI-KA-QLNKLQK-AGKYYTPHHLLA 31 usage_03144.pdb 1 --G------------------------KVERKNSDI-KR-LLTKLLVGRPT--KWYDLLP 30 usage_01000.pdb 37 -A-NYLSQ-EE-- 44 usage_01623.pdb 33 HALFVL------- 38 usage_02047.pdb 34 -----LNH-FE-- 38 usage_02768.pdb 32 IQRFLTAL-VGEI 43 usage_03004.pdb 32 HALFVLNH-VN-- 41 usage_03005.pdb 32 HALFVLNH-VN-- 41 usage_03006.pdb 32 HALFVL------- 37 usage_03144.pdb 31 VVQLALNNT---- 39 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################