################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:40 2021 # Report_file: c_1304_72.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00031.pdb # 2: usage_00461.pdb # 3: usage_00537.pdb # 4: usage_00917.pdb # 5: usage_01052.pdb # 6: usage_01103.pdb # 7: usage_01159.pdb # 8: usage_01169.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 47 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 47 ( 53.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 KSSQNTLVDFLNDLGVIVHFKDIS--------LLDTHVL-------- 31 usage_00461.pdb 1 ------LFGQNMLYH-YLGRAGY-TIHVQCNASKFHQGCLLVVCVPE 39 usage_00537.pdb 1 ------LFGQNMLYH-YLGRAGY-TIHVQCNASKFHQGCLLVVCVPE 39 usage_00917.pdb 1 -------FGENMFYH-YLGRSGY-TIHVQCNASKFHQGTLIVALIPE 38 usage_01052.pdb 1 ------LFGQNMYYH-YLGRSGY-TVHVQCNASKFHQGALGVFAVP- 38 usage_01103.pdb 1 G-----VFGQNAQFH-YLYRSGF-CIHVQCNASKFHQGALLVAVLP- 39 usage_01159.pdb 1 G-----IFGENMFYH-YLGRSGY-TIHVQCNASKFHQGTLIVALIPE 40 usage_01169.pdb 1 ------LFGQNMYYH-YLGRSGY-TVHVQCNASKFHQGALGVFAVP- 38 fg n h yl r g skfhqg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################