################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:54 2021 # Report_file: c_0288_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_00056.pdb # 6: usage_00132.pdb # 7: usage_00133.pdb # 8: usage_00169.pdb # 9: usage_00170.pdb # # Length: 129 # Identity: 59/129 ( 45.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/129 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/129 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00011.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00054.pdb 1 SKFVKINEKGFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 58 usage_00055.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00056.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00132.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00133.pdb 1 ---------GFSDFNI-HYNE-AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVI 49 usage_00169.pdb 1 SRFLNVEEAG-KTLRIHFNDC-GQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVI 58 usage_00170.pdb 1 SRFLNVEEAG-KTLRI-HFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVI 58 G I h n ETV LHG GPGA GW N RN P V AGYRVI usage_00010.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 109 usage_00011.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 109 usage_00054.pdb 59 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 118 usage_00055.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 109 usage_00056.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPD 109 usage_00132.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 109 usage_00133.pdb 50 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPD 109 usage_00169.pdb 59 LLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPE 118 usage_00170.pdb 59 LLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPE 118 L D PG KSD VV R NAR K D LDI HL GNsMGG F L P usage_00010.pdb 110 RIGKLILM- 117 usage_00011.pdb 110 RIGKLILM- 117 usage_00054.pdb 119 RIGKLILM- 126 usage_00055.pdb 110 RIGKLILMG 118 usage_00056.pdb 110 RIGKLILM- 117 usage_00132.pdb 110 RIGKLILM- 117 usage_00133.pdb 110 RIGKLILM- 117 usage_00169.pdb 119 RVGKLVLMG 127 usage_00170.pdb 119 RVGKLVLMG 127 R GKL LM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################