################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:57 2021 # Report_file: c_0767_45.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00140.pdb # 4: usage_00232.pdb # 5: usage_00236.pdb # 6: usage_00238.pdb # 7: usage_00240.pdb # 8: usage_00266.pdb # 9: usage_00462.pdb # 10: usage_00524.pdb # 11: usage_00526.pdb # # Length: 66 # Identity: 27/ 66 ( 40.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 66 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 66 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 EFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDP 60 usage_00062.pdb 1 EFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDP 60 usage_00140.pdb 1 -----LT-LRPCGGGIYGGQTHSQSPEA-FTQVCGLRTV-PSNPYDAKGLLIASIECDDP 52 usage_00232.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 usage_00236.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 usage_00238.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 usage_00240.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 usage_00266.pdb 1 RYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDP 60 usage_00462.pdb 1 RYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDP 60 usage_00524.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 usage_00526.pdb 1 -----LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDP 55 r P GGG HS S E GL V S PYDAKGLL I DP usage_00061.pdb 61 VIFLEP 66 usage_00062.pdb 61 VIFLEP 66 usage_00140.pdb 53 VIFLEP 58 usage_00232.pdb 56 VVFLEP 61 usage_00236.pdb 56 VVFLEP 61 usage_00238.pdb 56 VVFLEP 61 usage_00240.pdb 56 VVFLEP 61 usage_00266.pdb 61 VIFLEH 66 usage_00462.pdb 61 VIFLEH 66 usage_00524.pdb 56 VVFLEP 61 usage_00526.pdb 56 VVFLEP 61 V FLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################