################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:37 2021 # Report_file: c_0658_12.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_00126.pdb # 6: usage_00358.pdb # 7: usage_00359.pdb # 8: usage_00904.pdb # 9: usage_00905.pdb # 10: usage_01179.pdb # 11: usage_01180.pdb # 12: usage_01181.pdb # # Length: 61 # Identity: 45/ 61 ( 73.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 61 ( 73.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 61 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 GAKSYGGPVLEDIGYK---EADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 57 usage_00123.pdb 1 GAKSYGGPVLEDIGY-----ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 55 usage_00124.pdb 1 GAKSYGGPVLEDIGYKVPDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 60 usage_00125.pdb 1 GAKSYGGPVLEDIGYK----ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 56 usage_00126.pdb 1 GAKSYGGPVLEDIGYKV--EADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 58 usage_00358.pdb 1 GAKSY---------------ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 45 usage_00359.pdb 1 GAKSY---------------ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 45 usage_00904.pdb 1 GAKSYGGPVLEDIGYK----ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 56 usage_00905.pdb 1 GAKSYGGPVLEDIGY-----ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 55 usage_01179.pdb 1 GAKSYGGPVLEDIGYKVPDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 60 usage_01180.pdb 1 GAKSYGGPVLEDIGYKV---ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 57 usage_01181.pdb 1 -AKSYGGPVLEDIGY-----ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT 54 AKSY ADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWT usage_00122.pdb 58 P 58 usage_00123.pdb 56 P 56 usage_00124.pdb 61 P 61 usage_00125.pdb 57 P 57 usage_00126.pdb 59 P 59 usage_00358.pdb 46 P 46 usage_00359.pdb 46 P 46 usage_00904.pdb 57 P 57 usage_00905.pdb 56 P 56 usage_01179.pdb 61 P 61 usage_01180.pdb 58 P 58 usage_01181.pdb 55 P 55 P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################