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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:10:53 2021
# Report_file: c_1120_27.html
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#====================================
# Aligned_structures: 9
#   1: usage_00259.pdb
#   2: usage_00260.pdb
#   3: usage_00508.pdb
#   4: usage_00509.pdb
#   5: usage_00510.pdb
#   6: usage_00511.pdb
#   7: usage_00512.pdb
#   8: usage_00513.pdb
#   9: usage_00575.pdb
#
# Length:         73
# Identity:        5/ 73 (  6.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     26/ 73 ( 35.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 73 ( 28.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00259.pdb         1  -VEEAVKRALKLKTKLG-V---SLEQALKILEVAAELGTTVEEAVKRALKLKTKLGVSLE   55
usage_00260.pdb         1  -VEEAVKRALKLKTKLG-V---SLEQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLE   55
usage_00508.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAKAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00509.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAEAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00510.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAKAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00511.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAKAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00512.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAEAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00513.pdb         1  ----TVEEAYKLALKLG-I---SVEELLKLAKAAYYSGTTVEEAYKLALKLG----I-SV   47
usage_00575.pdb         1  SAKEKTDLVQKFGESLADTLTESKNIMLSYLYKED----PNYGTRVAEVAK-----G-DL   50
                                v  a Kl  kLg     S e  Lk    a     tveea k alkl         

usage_00259.pdb        56  QALKILEVAAKLG   68
usage_00260.pdb        56  QALKILEVAAEL-   67
usage_00508.pdb        48  EELLKLAKAAYYS   60
usage_00509.pdb        48  EELLKLAKAAYYS   60
usage_00510.pdb        48  EELLKLAEAAYYS   60
usage_00511.pdb        48  EELLKLAKAAYYS   60
usage_00512.pdb        48  EELLKLAKAAYYS   60
usage_00513.pdb        48  EELLKLAEAAYYS   60
usage_00575.pdb        51  SKVKSLAASL---   60
                             l  L  aa   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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