################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:11 2021 # Report_file: c_0768_109.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00129.pdb # 2: usage_00327.pdb # 3: usage_00328.pdb # 4: usage_00364.pdb # # Length: 80 # Identity: 4/ 80 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 80 ( 47.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 80 ( 22.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 -KCVESGGPEPGVGC--AGRGVITAINFLEEEGAYEDDLD-FVFYDVLGDVV-----CGG 51 usage_00327.pdb 1 VRQFHFHGWPEIGI-PAEGKGMIDLIAAVQKQQ-QQTGNH-PITVHCSA---GAGRTGTF 54 usage_00328.pdb 1 VRQFHFHGWPEIGI-PAEGKGMIDLIAAVQKQQ-QQTGNH-PITVHCSA---GAGRTGTF 54 usage_00364.pdb 1 IRQFQFTDWPEQGV-PKTGEGFIDFIGQVHKTK-EQFGQDGPITVHCSA---GVGRTGVF 55 rqf f gwpe g G G Id I v k q g pitvhcsa g f usage_00129.pdb 52 FAMPIREN---KAQEIYIVC 68 usage_00327.pdb 55 IALSNILERVKAEGLLDVF- 73 usage_00328.pdb 55 IALSNILERVKAEGLLDVF- 73 usage_00364.pdb 56 ITLSIVLERMRYEGVVDMF- 74 ials le eg d f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################