################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:52 2021 # Report_file: c_1421_1.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00062.pdb # 4: usage_00242.pdb # # Length: 160 # Identity: 137/160 ( 85.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 137/160 ( 85.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/160 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -------SDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEK 53 usage_00039.pdb 1 AAELGEISDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEK 60 usage_00062.pdb 1 ----GEISDIHTKLLRLSSSQGTIESSLQDISSRLSPGGLLADTWAHQEGTHPRDRNVEK 56 usage_00242.pdb 1 --ELGEISDIHTKLLRLSSSQGTIESSLQDISSRLSPGGLLADTWAHQEGTHPRDRNVEK 58 SDIHTKLLRLSSSQGTIE SLQDI SRLSPGG LAD WAHQEGTHP DRNVEK usage_00038.pdb 54 LQVLLNCMTEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMTHFTDECVKKYEA 113 usage_00039.pdb 61 LQVLLNCMTEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMTHFTDECVKKYEA 120 usage_00062.pdb 57 LQVLLNCITEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMSHFSEECVRKYEA 116 usage_00242.pdb 59 LQVLLNCITEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMSHFSEECVRKYEA 118 LQVLLNC TEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAM HF ECV KYEA usage_00038.pdb 114 FLNKSEEWIRKMLHLRKQLLSLTNQCFDIEEEVSKYQEYT 153 usage_00039.pdb 121 FLNKSEEWIRKMLHLRKQLLSLTNQCFDIEEEVSKYQ--- 157 usage_00062.pdb 117 FKDKSEEWMRKMLHLRKQLLSLTNQCFDIEEEVSKYQ--- 153 usage_00242.pdb 119 FKDKSEEWMRKMLHLRKQLLSLTNQCFDIEEEVSKYQDY- 157 F KSEEW RKMLHLRKQLLSLTNQCFDIEEEVSKYQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################