################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:34 2021 # Report_file: c_0690_47.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00220.pdb # 2: usage_00299.pdb # 3: usage_00302.pdb # # Length: 90 # Identity: 3/ 90 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 90 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 90 ( 48.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 -CDVSGVDTESGATCRIKIGSWT--HHSREI-SVDP--SEYFSQYS----RFEILDVTQK 50 usage_00299.pdb 1 SCDVSGVDTESGATCRIKIGSWT--HHSREI-SVDPTDSEYFSQYS----RFEILDVTQK 53 usage_00302.pdb 1 --------------RTVYGTAHGPGYSGGASIGVAY----HLPEGVPDFSE-DFHIFSIE 41 crikigswt hhsrei sVdp yfsqys r eildvtqk usage_00220.pdb 51 KNSVT------AYEDVE----VSL--NFRK 68 usage_00299.pdb 54 KNSVTYSCCPEAYEDVE----VSL--NFRK 77 usage_00302.pdb 42 W-D-E----DEVEWYVDGQLYHVLSK---- 61 k s t ayedVe vsL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################