################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:14 2021 # Report_file: c_1373_233.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01023.pdb # 2: usage_01298.pdb # 3: usage_01299.pdb # 4: usage_01724.pdb # 5: usage_01725.pdb # 6: usage_01852.pdb # # Length: 58 # Identity: 3/ 58 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 58 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 58 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01023.pdb 1 E-F-AFWVLNSD--GKNSLLDIAYKSG-EFRRIKYAADALYRVE-------------- 39 usage_01298.pdb 1 --DQERTLLGL-LSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLG------------- 42 usage_01299.pdb 1 --DQERTLLGL-LSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLG------------- 42 usage_01724.pdb 1 -TDREKEVLEL-VADGKNTKEIAQELSIKSGTVRNYISMILEKLEVKNRIEAITRSKE 56 usage_01725.pdb 1 -TDREKEVLEL-VADGKNTKEIAQELSIKSGTVRNYISMILEKLEVKNRIE------- 49 usage_01852.pdb 1 -SKFEKEVLTY-LIRGYSYREIATILSKNLKSIDNTIQRIRKKSEEWIKEEENI---- 52 e L g IA n k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################