################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:51 2021 # Report_file: c_1110_45.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00065.pdb # 2: usage_00116.pdb # 3: usage_00125.pdb # 4: usage_00147.pdb # 5: usage_00192.pdb # 6: usage_00346.pdb # # Length: 79 # Identity: 15/ 79 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 79 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 79 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 ----LEPHMSAETLTYHHDKHHQTYVDTLNSIAAENSTIASKTLEQIIKTE-------TG 49 usage_00116.pdb 1 ----LEPHISAETLDYHHGKHHNTYVVKLNGLIPGT-EFEGKTLEEIIKTS-------TG 48 usage_00125.pdb 1 AVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGT-EFENADLNTIVQKS-------EG 52 usage_00147.pdb 1 ----LEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISNLDAVPENIRT 56 usage_00192.pdb 1 DYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVT 60 usage_00346.pdb 1 ----LAPVISKETVEFHHGKHLKTYVDNLNKLIIGT-EFENADLNTIVQKS-------EG 48 L P i eT HH KH TYV LN L usage_00065.pdb 50 KPFNQAAQVYNHTFFFNN- 67 usage_00116.pdb 49 GVFNNAAQIWNHTFYWNCL 67 usage_00125.pdb 53 GIFNNAGQTLNHNLYFTQF 71 usage_00147.pdb 57 AVRNNGGGHANHSLFWKL- 74 usage_00192.pdb 61 AVRNNGGGHYCHSLFWEV- 78 usage_00346.pdb 49 GIFNNAGQTLNHNLYFTQF 67 Nn nH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################