################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:53 2021 # Report_file: c_1488_638.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_03434.pdb # 2: usage_03945.pdb # 3: usage_03946.pdb # 4: usage_06146.pdb # 5: usage_06863.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 39 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 39 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03434.pdb 1 RDKLKAAFGYYRSH-ADS---IRQNEA----LLAN---- 27 usage_03945.pdb 1 -VDDIKRVYSLFLD-ESRSTQYKEYQD----AFLFN--- 30 usage_03946.pdb 1 -VDDIKRVYSLFL-DESRSTQYKEYQD----AFLFN--- 30 usage_06146.pdb 1 -----IDNY----TSEIYTLIEESQNQQEKNEQELLELD 30 usage_06863.pdb 1 --WDLFLKD----IDELHHSYHMGVWY----WR------ 23 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################