################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:47:42 2021 # Report_file: c_0145_11.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00063.pdb # 2: usage_00071.pdb # 3: usage_00076.pdb # 4: usage_00084.pdb # 5: usage_00095.pdb # 6: usage_00120.pdb # 7: usage_00121.pdb # 8: usage_00138.pdb # 9: usage_00150.pdb # 10: usage_00177.pdb # 11: usage_00250.pdb # 12: usage_00263.pdb # 13: usage_00266.pdb # 14: usage_00282.pdb # 15: usage_00293.pdb # 16: usage_00325.pdb # 17: usage_00326.pdb # 18: usage_00333.pdb # 19: usage_00340.pdb # 20: usage_00341.pdb # 21: usage_00342.pdb # 22: usage_00362.pdb # 23: usage_00366.pdb # 24: usage_00367.pdb # 25: usage_00369.pdb # 26: usage_00458.pdb # 27: usage_00483.pdb # 28: usage_00484.pdb # 29: usage_00485.pdb # 30: usage_00486.pdb # 31: usage_00488.pdb # 32: usage_00535.pdb # 33: usage_00544.pdb # 34: usage_00561.pdb # 35: usage_00576.pdb # # Length: 157 # Identity: 13/157 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/157 ( 14.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/157 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 EVQLQ-QWGAGLLKPSETLSLTCAVYGGSFS--DYYWSWIRQPPGKGLEWIGEINH--S- 54 usage_00071.pdb 1 EVQLQ-ESGPSLVKPSQTLSLTCSVTGDSVT--SGYWSWIRQFPGNKLDYMGYISY--R- 54 usage_00076.pdb 1 QVQLQ-QSGPGLVKPSQTLSLTCGISGDSVSSNSAAWNWLRQSPSRGLEWLGRTYYRSK- 58 usage_00084.pdb 1 --QLQ-ESGPGLVKPSQTLSLSCTVSGGS--G-AHYWSWIRQYPGKGLEWIGYIHY--S- 51 usage_00095.pdb 1 --QLQ-ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSH--CA 55 usage_00120.pdb 1 --RVQLQSGPGLVKPSQSLSLTCTVTGYSITS-DFAWNWIRQFPGNKLEWMGYINY--S- 54 usage_00121.pdb 1 --RVQLQSGPGLVKPSQSLSLTCTVTGYSITS-DFAWNWIRQFPGNKLEWMGYINY--S- 54 usage_00138.pdb 1 -VQLQ-ESGPGILQPSQTLSLTCSFSGFSLSTYGMGVSWIRQPSGKGLEWLAHIFW--D- 55 usage_00150.pdb 1 -VQLV-ESGPGLVKPSETLSLTCAVSGGSIS--TNDWSWIRQPPGKGLEWIGGISG-SS- 54 usage_00177.pdb 1 -VQLQ-ESGPGLVKPSETLSLTCTVSGYSITS-DYAWNWIRQPPGKGLEWIGSISY--S- 54 usage_00250.pdb 1 --QLQ-ESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSVYY--S- 54 usage_00263.pdb 1 QVQLQ-QWGAGLLKPSETLSLTCAVYNESLS--AFSWSWIRQFPGQGLEWIGEIDH--T- 54 usage_00266.pdb 1 -VQLQ-ESGPGLVKPSETLSLTCTVSGGSIS--SYYWSWIRQPPGKGLEWIGYIYY--S- 53 usage_00282.pdb 1 ---LL-ESGPGLVKPSETLSLTCTVSG------GSIWGWIRQPPGKGLEWIGSIYS--S- 47 usage_00293.pdb 1 -VQLQ-ESGPGLVKPSQSLSLTCTVTGFSITS-PYAWNWIRQFPGNTLEWMGYISY--R- 54 usage_00325.pdb 1 -VTLK-ESGPVLVKPTETLTLTCTVSGFSLSTYGMGVGWIRQPPGKALEWLAHIWW--D- 55 usage_00326.pdb 1 EVQLV-ESGPSLVKPSQTLSLTCSVTGDSIT--SGFWNWIRKFPGNKLEFMGYITY--S- 54 usage_00333.pdb 1 -LQLQ-ESGLGLVKPSETLSLTCTVSGDSVSSGSYYWSWLRQPPGKGLEWIGNMHG--S- 55 usage_00340.pdb 1 -VQLQ-ESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYY--S- 55 usage_00341.pdb 1 -VQLQ-ESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYY--S- 55 usage_00342.pdb 1 QVQLQ-ESGPGLVKSSETLSLTCTVSGGSMG--GYYWSWLRQSPVKGLEWIGYIFH--T- 54 usage_00362.pdb 1 QVQLQ-QWGAGLLKPSETLSLTCGVYGESL--G-HYWSWVRQPPGKRLEWIGEIKH--N- 53 usage_00366.pdb 1 -VQLQ-ESGPGLVKPSDTLSLTCAVSGYSITGG-YSWHWIRQPPGKGLEWMGYIHY--S- 54 usage_00367.pdb 1 QVQLQ-ESGPGLVKPSDTLSLTCAVSGYPIRFG-YSWHWIRQPPGKGLEWMGYIHY--S- 55 usage_00369.pdb 1 --QLV-ESGPGLVKPLETLSLTCAVPGGSIR--RNYWSWIRQPPGKGLEWIGHSYG-SG- 53 usage_00458.pdb 1 QLQLQ-ESGPGLVKPSETLSLTCAVSGGSIS--NNHWSWIRQPPGKGLEWIGLISG-SG- 55 usage_00483.pdb 1 ELQLQ-ESGPGLVKPSETLSLTCTVSGGSISSGSYYWDWIRQPPGKGLEWIGNIYK--S- 56 usage_00484.pdb 1 QVQLQ-QSGPGLVKPSQTLSLTCVISGDTVSSNRAAWNWIRQSPSRGLEWLGRTYYRSK- 58 usage_00485.pdb 1 -VQLQ-ESGPSLVKPSQTLSLTCSVTGDSIT--SGYWNWIRKFPGNKLEYMGYISY--S- 53 usage_00486.pdb 1 -VQLQ-ESGPSLVKPSQTLSLTCSVTGD--T--SGYWNWIRKFPGNKLEYMGYISY--S- 51 usage_00488.pdb 1 -VQLV-ESGPGLVKPSQTLSLTCTVSGASISSGGYFWSWIRQHPGKGLEWIGNIYY--I- 55 usage_00535.pdb 1 -VTLR-ESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWW--D- 55 usage_00544.pdb 1 ---LL-ESGPGLVKPSETLSLTCTVSG------GSIWGWIRQPPGKGLEWIGSIYS--S- 47 usage_00561.pdb 1 -VQLQ-ESGPGLVRPSETLSVTCIVSGGSIS--NYYWTWIRQSPGKGLEWIGYISD--R- 53 usage_00576.pdb 1 --QLQ-ESGPGLVKPSETLSLTCTVSGGSIS--SYYWSWIRQPPGKGLEWIGYIYY--S- 52 G l L ltC g W R p Le usage_00063.pdb 55 -----GSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPP-HD------- 101 usage_00071.pdb 55 -----GSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFD-SD------- 101 usage_00076.pdb 59 -----WYNDYAVSMKSRITINPDTSRNQFSLQLNSVTPEDTAVYYCARDG-EI----S-- 106 usage_00084.pdb 52 -----GNTYYNPSLKSRITISQHTSENQFSLKLNSVTVADTAVYYCARGT-RL----R-- 99 usage_00095.pdb 56 SYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFG-GEVLRYT-- 112 usage_00120.pdb 55 -----GFTSHNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAGLL-WY------- 101 usage_00121.pdb 55 -----GFTSHNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAGLL-WY------- 101 usage_00138.pdb 56 -----GDKRYNPSLKSRLKISKDTSNNQVFLKITSVDTADTATYYCVQE----------- 99 usage_00150.pdb 55 -----GDTDYNPALKSQVTISTDTSKNQFSLKLTSVTAADTAVYYCVREG-IVL---V-- 103 usage_00177.pdb 55 -----GITGYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARMG-Y-------- 100 usage_00250.pdb 55 -----GGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIY-GSG---T-- 103 usage_00263.pdb 55 -----TSSNYNPSLKRRINISIDTSKKQFSLKLYSVTAADTAVYYCARGGRKVY---H-- 104 usage_00266.pdb 54 -----GSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTL-HGR---R-- 102 usage_00282.pdb 48 -----GSTYYNPSLKSRVTTSVDTSKNQFSLRLSSVTAADTAVYYCVAWF-GDL---L-- 96 usage_00293.pdb 55 -----GSTTYHPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYFCSSYG-NY------- 101 usage_00325.pdb 56 -----DVKRYNPALKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARMG-SD------- 102 usage_00326.pdb 55 -----GTSYYKPSLKSRISITRDTSKNQYFLQLNSVTAEDTATYYCARRGFLT------- 102 usage_00333.pdb 56 -----GHTNYNPSLKSRVTITPDTSKNHFSLRLSSVTAADTAVYYCARAL-LT------- 102 usage_00340.pdb 56 -----GSTDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVS-IF------- 102 usage_00341.pdb 56 -----GSTDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVS-IF------- 102 usage_00342.pdb 55 -----GHTNYNPSLESRVTVSVDTSENQFSLRLRSVTAADTAVYYCASLP-RG------- 101 usage_00362.pdb 54 -----GSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRS-NW------- 100 usage_00366.pdb 55 -----GYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKD-PS------- 101 usage_00367.pdb 56 -----GYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKD-SG------- 102 usage_00369.pdb 54 -----GSTNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTV-WYY---T-- 102 usage_00458.pdb 56 -----GSTDYNPSLKSRVTISTDTSKNQFSLKLSSVTAADTAVYYCARID-VVI---TSH 106 usage_00483.pdb 57 -----GSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARER-GM------- 103 usage_00484.pdb 59 -----WYTDYAVSVKSRITITPDTSKNQFSLQMKSVTPEDTAVYYCARGS-AM----I-- 106 usage_00485.pdb 54 -----GSTYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALIT-TT------- 100 usage_00486.pdb 52 -----GSTYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALIT-TT------- 98 usage_00488.pdb 56 -----GNTYYNPSLKSRLTISVDTTQNQFSLKLTSVTAADTAVYYCARVP-RL------- 102 usage_00535.pdb 56 -----DKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDM-IF------- 102 usage_00544.pdb 48 -----GSTYYNPSLKSRVTTSVDTSKNQFSLRLSSVTAADTAVYYCVAWF-GDL---L-- 96 usage_00561.pdb 54 -----ETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATAR-RGQ---R-- 102 usage_00576.pdb 53 -----GSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTQ-QGK---R-- 101 r dt L DTA Y C usage_00063.pdb 102 ------------T---S--GHYW-NYWGQGTLVTVS- 119 usage_00071.pdb 102 ----------------D---YAM-EYWGQGTSVTV-- 116 usage_00076.pdb 107 ------------Y---DYYYYGM-DVWGRGTLVT--- 124 usage_00084.pdb 100 ------------T---L---RNAFDIWGQGTMVTV-- 116 usage_00095.pdb 113 ------------DW-PK--PAWV-DLWGRGTLVTVS- 132 usage_00120.pdb 102 ----------------D---GGA-GSWGQGTLVTVS- 117 usage_00121.pdb 102 ----------------D---GGA-GSWGQGTLVTV-- 116 usage_00138.pdb 100 ---------------------GY-IYWGQGTSVTVS- 113 usage_00150.pdb 104 --N---------LA--V--KNWF-DVWGPGVLVTVSS 124 usage_00177.pdb 101 --------------------DGL-AYWGQGTLVT--- 113 usage_00250.pdb 104 ------------FY--Y--YFYM-DVWGKGSTVTVS- 122 usage_00263.pdb 105 --A-----YW---SGYV--NNCF-DPWGQGTLVT--- 125 usage_00266.pdb 103 --IYGI--VE--WF--T--YYYM-DVWGK-------- 120 usage_00282.pdb 97 ------------S---L---KGV-ELWGQGTLVT--- 111 usage_00293.pdb 102 ----------------------G-AYSGQGTLVTVS- 114 usage_00325.pdb 103 ----------------Y--DVWF-DYWGQGTLVTV-- 118 usage_00326.pdb 103 ---------T---V--N--YYAM-DYWGQGTSVTVS- 121 usage_00333.pdb 103 ----------------T--VTTF-EYWGQGTLVTVS- 119 usage_00340.pdb 103 ----------------G--VGTF-DYWGQGTLVTVS- 119 usage_00341.pdb 103 ----------------G--VGTF-DYWGQGTLVTV-- 118 usage_00342.pdb 102 ---------Q---L--V--NAFF-DNWGQGTLVTVA- 120 usage_00362.pdb 101 ----------------P--YLPF-DPWGQGTLVTVS- 117 usage_00366.pdb 102 --------------------DAF-PYWGQGTLVTV-- 115 usage_00367.pdb 103 --------------------NYF-PYWGQGTLVTV-- 116 usage_00369.pdb 103 -------------S--G--THYF-DHWGQGVLVTVS- 120 usage_00458.pdb 107 EDD-----FGDYYT-GE--YYGL-DSWGQGVVVTV-- 132 usage_00483.pdb 104 --------------------HYM-DVWGKGTTVTVS- 118 usage_00484.pdb 107 ----------------FGIVIIL-ESWGQGTLVT--- 123 usage_00485.pdb 101 ----------------T---YAM-DYWGQGTSVTVS- 116 usage_00486.pdb 99 ----------------T---YAM-DYWGQGTSVTV-- 113 usage_00488.pdb 103 ------------R---G--GNYF-DSWGQGTLVTVS- 120 usage_00535.pdb 103 ----------------N---FYF-DVWGQGTTVTVS- 118 usage_00544.pdb 97 ------------S---L---KGV-ELWGQGTLVT--- 111 usage_00561.pdb 103 --IYGVVSFG-EFF--Y--YYYM-DVWGKGTAVTV-- 129 usage_00576.pdb 102 --IYGV--FG-DYY--Y--YYYM-DVWGKGTTVTVS- 127 wG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################