################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:27 2021 # Report_file: c_0043_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00049.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00075.pdb # 5: usage_00076.pdb # 6: usage_00087.pdb # 7: usage_00090.pdb # 8: usage_00252.pdb # 9: usage_00253.pdb # 10: usage_00254.pdb # 11: usage_00255.pdb # 12: usage_00276.pdb # # Length: 226 # Identity: 47/226 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/226 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/226 ( 18.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 YMVLLSLD---R-KTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLV 56 usage_00059.pdb 1 --AYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGRS-MTVTLGAHNIKAKEETQQIIPV 57 usage_00060.pdb 1 --AYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGRS-MTVTLGAHNIKAKEETQQIIPV 57 usage_00075.pdb 1 YMAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 58 usage_00076.pdb 1 YMAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 58 usage_00087.pdb 1 -MAYLEIVTPENHLSACSGFLIRRNFVMTAAHCAGRS-ITVLLGAHNKKVKEDTWQKLEV 58 usage_00090.pdb 1 YMAFLLF-KTSGKSHICGGFLVREDFVLTAAHCLGSS-INVTLGAHNIMERERTQQVIPV 58 usage_00252.pdb 1 -MAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 57 usage_00253.pdb 1 YMAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 58 usage_00254.pdb 1 -MAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 57 usage_00255.pdb 1 YMAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 58 usage_00276.pdb 1 YMAFVQF-LQEKSRKRCGGILVRKDFVLTAAHCQGSS-INVTLGAHNIKEQERTQQFIPV 58 a C G L r fVlTAAHC g s V LGAHni E T Q V usage_00049.pdb 57 KKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTH 116 usage_00059.pdb 58 AKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKV- 116 usage_00060.pdb 58 AKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKV- 116 usage_00075.pdb 59 KRPIPHPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 118 usage_00076.pdb 59 KRPIPHPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 118 usage_00087.pdb 59 EKQFPHPKYDDRLVLNDIMLLKLKEKANLTLGVGTLPISAKSNSIPPGRVCRAVGWGRTN 118 usage_00090.pdb 59 RRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLG 118 usage_00252.pdb 58 KRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 117 usage_00253.pdb 59 KRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 118 usage_00254.pdb 58 KRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 117 usage_00255.pdb 59 KRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 118 usage_00276.pdb 59 KRPIPHPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS 118 PhP Y n imLL L A t V l lp vkPG C vaGWG usage_00049.pdb 117 NS-ASW-SDTLREVNITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSP 174 usage_00059.pdb 117 --------KTLHEVKLTVQKDQVCESQ--FQSSY-NRANEICVGD---------GDSGGP 156 usage_00060.pdb 117 --------KTLHEVKLTVQKDQVCESQ--FQSSY-NRANEICVGD---------GDSGGP 156 usage_00075.pdb 119 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 172 usage_00076.pdb 119 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 172 usage_00087.pdb 119 --VNEPPSDTLQEVKMRILDPQAC-KH--F-EDF-HQEPQLCVGNPKKIRNVYKGDSGGP 171 usage_00090.pdb 119 --VNMP-STDKLQEVDLEVQSEEKCIA--RFKNY-IPFTQICAGDPSKRKNSFSGDSGGP 172 usage_00252.pdb 118 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 171 usage_00253.pdb 119 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 172 usage_00254.pdb 118 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 171 usage_00255.pdb 119 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 172 usage_00276.pdb 119 --MSTL-ATTLQEVLLTVQKDCQCERL--FHGNY-SRATEICVGDPKKTQTGFKGDSGGP 172 tl ev c C G GDSGgP usage_00049.pdb 175 LLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI--- 217 usage_00059.pdb 157 LVCKRAAAGIVSYGQTDG----SAPQVFT-RVLSFVSWIKKTMKH- 196 usage_00060.pdb 157 LVCKRAAAGIVSYGQ--G----SAPQVFT-RVLSFVSWIKKTMKH- 194 usage_00075.pdb 173 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMKR- 212 usage_00076.pdb 173 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMK-- 211 usage_00087.pdb 172 LLCAGIAQGIASYVLRNA----KPPSVFT-RISHYRPWINKILREN 212 usage_00090.pdb 173 LVCNGVAQGIVSYGRNDG----TTPDVYT-RISSFLSWIHSTMR-- 211 usage_00252.pdb 172 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMKRL 212 usage_00253.pdb 173 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTM--- 210 usage_00254.pdb 172 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMKRL 212 usage_00255.pdb 173 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMKRL 213 usage_00276.pdb 173 LVCKDVAQGILSYGNKKG----TPPGVYI-KVSHFLPWIKRTMKR- 212 L C a Gi Syg P V WI t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################