################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:04 2021 # Report_file: c_0886_24.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00133.pdb # 2: usage_00309.pdb # 3: usage_00346.pdb # 4: usage_00683.pdb # 5: usage_00685.pdb # 6: usage_00692.pdb # # Length: 134 # Identity: 94/134 ( 70.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 100/134 ( 74.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/134 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 --ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLASANQE--A-ESSRKLT 55 usage_00309.pdb 1 --ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMY--------PLA-ESSRKLT 49 usage_00346.pdb 1 --ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSS-------------MDSSRKLA 45 usage_00683.pdb 1 --ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSS-------------MDSSRKLA 45 usage_00685.pdb 1 EGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSS---------------SSRKLA 45 usage_00692.pdb 1 --ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSS-------------MDSSRKLA 45 ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSS SSRKL usage_00133.pdb 56 HLLNAVTDALVWVIAKSGISSQQQSVRLANLLMLLSHVRHISNKGMEHLLSMK------- 108 usage_00309.pdb 50 HLLNAVTDALVWVIAKSGISSQQQSVRLANLLMLLSHVRHISNKGMEHLLSMKCKNVVPV 109 usage_00346.pdb 46 HLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPV 105 usage_00683.pdb 46 HLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPV 105 usage_00685.pdb 46 HLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPV 105 usage_00692.pdb 46 HLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPV 105 HLLNAVTDALVWVIAKSGISSQQQS RLANLLMLLSHVRH SNKGMEHLL MK usage_00133.pdb 109 DLLLEMLNA----- 117 usage_00309.pdb 110 YDLLLEML-N---- 118 usage_00346.pdb 106 YDLLLEML-NA--- 115 usage_00683.pdb 106 YDLLLEML-NA--- 115 usage_00685.pdb 106 YDLLLEML-NA--- 115 usage_00692.pdb 106 YDLLLEML-NAHVL 118 ydLLleml #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################