################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:23 2021 # Report_file: c_1029_13.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00008.pdb # 8: usage_00023.pdb # 9: usage_00024.pdb # 10: usage_00025.pdb # 11: usage_00073.pdb # 12: usage_00074.pdb # 13: usage_00200.pdb # 14: usage_00201.pdb # 15: usage_00208.pdb # 16: usage_00226.pdb # 17: usage_00227.pdb # 18: usage_00244.pdb # 19: usage_00267.pdb # 20: usage_00268.pdb # # Length: 68 # Identity: 5/ 68 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 68 ( 20.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 68 ( 52.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00003.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00004.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00005.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00006.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00007.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00008.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00023.pdb 1 -VAIIVAALKPALGIGYKGKMPW-RLRK------EIRYFKDVTTRTT--KPNTRNAVIMG 50 usage_00024.pdb 1 NVAIIVAALKPALGIGYKGKMPW-RLRK------EIRYFKDVTTRTT--KPNTRNAVIMG 51 usage_00025.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00073.pdb 1 PVCLVVAMTP-KRGIGINNGLPWPHLTT------DFKHFSRVTKTTP---ASRFNAVVMG 50 usage_00074.pdb 1 -IILDLAVTLDG-FIEGK----N-GEVDWCIDPDGFTDFLNQI-----------DTILYG 42 usage_00200.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00201.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00208.pdb 1 -----VAASVLSSGIGINGQLPW-SISE------DLKFFSKITNNKC--DSNKKNALIMG 46 usage_00226.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00227.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00244.pdb 1 -FSLVVAVDER-GG-------IW-NVPE------DMKFFRDVTTKLRPSPA-KRNAVVMG 43 usage_00267.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 usage_00268.pdb 1 -VVGIVAALLPEMGIGFQGNLPW-RLAK------EMKYFREVTTLTN--DNSKQNVVIMG 50 vA g w F t n mG usage_00002.pdb 51 RKTWESI- 57 usage_00003.pdb 51 RKTWESI- 57 usage_00004.pdb 51 RKTWESI- 57 usage_00005.pdb 51 RKTWESI- 57 usage_00006.pdb 51 RKTWESI- 57 usage_00007.pdb 51 RKTWESI- 57 usage_00008.pdb 51 RKTWESI- 57 usage_00023.pdb 51 RKTWESI- 57 usage_00024.pdb 52 RKTWES-- 57 usage_00025.pdb 51 RKTWESI- 57 usage_00073.pdb 51 RKTWESM- 57 usage_00074.pdb 43 RKSFDLW- 49 usage_00200.pdb 51 RKTWESI- 57 usage_00201.pdb 51 RKTWESI- 57 usage_00208.pdb 47 RKTWDSIG 54 usage_00226.pdb 51 RKTWESI- 57 usage_00227.pdb 51 RKTWESI- 57 usage_00244.pdb 44 RKTWDSI- 50 usage_00267.pdb 51 RKTWESI- 57 usage_00268.pdb 51 RKTWESI- 57 RKtw s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################