################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:39 2021 # Report_file: c_1442_609.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00603.pdb # 2: usage_03910.pdb # 3: usage_04413.pdb # 4: usage_04806.pdb # 5: usage_04807.pdb # 6: usage_04811.pdb # 7: usage_05367.pdb # 8: usage_08738.pdb # 9: usage_13309.pdb # 10: usage_15778.pdb # 11: usage_17936.pdb # 12: usage_20941.pdb # # Length: 24 # Identity: 0/ 24 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 24 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 24 ( 45.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00603.pdb 1 FGKFIRIHFGP--TGKIAGADIET 22 usage_03910.pdb 1 --SRLRSHINP--TG-TVLLQLEN 19 usage_04413.pdb 1 --TNFTVIINP--SG-VVMWYLYP 19 usage_04806.pdb 1 --SRLRSHINP--TG-TVLLQLEN 19 usage_04807.pdb 1 --SRLRSHINP--TG-TVLLQLEN 19 usage_04811.pdb 1 --SRLRSHINP--TG-TVLLQLEN 19 usage_05367.pdb 1 -----LVRQNGNTTF-KVVIYLED 18 usage_08738.pdb 1 ---SRLKLKLN-KDI-VISVGIYN 19 usage_13309.pdb 1 ---SVMFMAVD-GKT-VALLVVED 19 usage_15778.pdb 1 --TNFTVIINP--SG-VVMWYLYP 19 usage_17936.pdb 1 A-RD-YTVTAP-DGV-VLAVQEA- 19 usage_20941.pdb 1 -----RATIDP--TG-VVVLR--- 13 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################