################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:54 2021 # Report_file: c_0390_45.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00220.pdb # 2: usage_00221.pdb # 3: usage_00235.pdb # # Length: 99 # Identity: 20/ 99 ( 20.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 99 ( 67.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 99 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 GPYITFTDAV--NETTIMLKWMYIPASNN--NTPIHGFYIYYRPT-DSDNDSDYKKDMVE 55 usage_00221.pdb 1 GPHIAYTEAV--SDTQIMLKWTY-----------IQGFYIYYRPT-DSDNDSDYKRDVVE 46 usage_00235.pdb 1 ----VTVVSKEGKPKTIIVNWQPP-S---EANGKITGYIIYYSTDVN-AEIHDWVIEPVV 51 t av ttImlkW y I GfyIYYrpt d dndsDyk d Ve usage_00220.pdb 56 GDKYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICE 94 usage_00221.pdb 47 GSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICE 85 usage_00235.pdb 52 GNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR 90 G k wH I hLqpeTsYdiKmQcfNegGesefSnvmice #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################