################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:06 2021 # Report_file: c_1399_35.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00773.pdb # 2: usage_00779.pdb # 3: usage_00786.pdb # 4: usage_00902.pdb # 5: usage_01089.pdb # 6: usage_01534.pdb # 7: usage_01599.pdb # 8: usage_01600.pdb # # Length: 73 # Identity: 62/ 73 ( 84.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 73 ( 84.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 73 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00773.pdb 1 LSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLA 60 usage_00779.pdb 1 LSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLA 60 usage_00786.pdb 1 -SGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGM--ANGAHIAGLA 57 usage_00902.pdb 1 LSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDL-----ANGAHIAGLA 55 usage_01089.pdb 1 LSGVVFALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLMSM--ANGAHIAGLA 58 usage_01534.pdb 1 --GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLA 58 usage_01599.pdb 1 --GVVFALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLA 58 usage_01600.pdb 1 LSGVVFALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLA 60 GVV ALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDL ANGAHIAGLA usage_00773.pdb 61 VGLAMAFVDSLNA 73 usage_00779.pdb 61 VGLAMAFVDSL-- 71 usage_00786.pdb 58 VGLAMAFVDSL-- 68 usage_00902.pdb 56 VGLAMAFVDSLN- 67 usage_01089.pdb 59 VGLAMAFVDSLNA 71 usage_01534.pdb 59 VGLAMAFVDS--- 68 usage_01599.pdb 59 VGLAMAFVDSLN- 70 usage_01600.pdb 61 VGLAMAFVDSLNA 73 VGLAMAFVDS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################