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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:56:42 2021
# Report_file: c_0777_12.html
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#====================================
# Aligned_structures: 8
#   1: usage_00425.pdb
#   2: usage_00539.pdb
#   3: usage_00540.pdb
#   4: usage_01058.pdb
#   5: usage_01059.pdb
#   6: usage_01060.pdb
#   7: usage_01314.pdb
#   8: usage_01315.pdb
#
# Length:         85
# Identity:        9/ 85 ( 10.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     56/ 85 ( 65.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/ 85 ( 34.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00425.pdb         1  ---HLEITPS-----NDRIVIQELLKEVAQMEQRY---KCVIINE-A----------NSL   38
usage_00539.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_00540.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_01058.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_01059.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_01060.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_01314.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
usage_01315.pdb         1  YAVNFPMRD-GIDDESYGQIFKPIISKVMEM----YQPSAVVLQCGADSLSGDRLGCFNL   55
                              nfpmrd      sygqifkpiiskVmeM       saVvlqc A          fnL

usage_00425.pdb        39  TKDAQAALRRTMEKYSKNIRLIMVC   63
usage_00539.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_00540.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_01058.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_01059.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_01060.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_01314.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
usage_01315.pdb        56  TVKGHAKCVEVVKTF-N-LPLLMLG   78
                           TvkghAkcvevvktf n lpLlMlg


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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