################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:18:56 2021 # Report_file: c_0087_4.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00011.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # 9: usage_00020.pdb # 10: usage_00021.pdb # 11: usage_00022.pdb # 12: usage_00023.pdb # 13: usage_00024.pdb # 14: usage_00025.pdb # 15: usage_00026.pdb # 16: usage_00029.pdb # 17: usage_00034.pdb # 18: usage_00047.pdb # 19: usage_00048.pdb # 20: usage_00081.pdb # 21: usage_00082.pdb # 22: usage_00084.pdb # 23: usage_00085.pdb # 24: usage_00087.pdb # 25: usage_00088.pdb # 26: usage_00089.pdb # 27: usage_00092.pdb # 28: usage_00106.pdb # 29: usage_00114.pdb # 30: usage_00115.pdb # 31: usage_00121.pdb # 32: usage_00122.pdb # 33: usage_00123.pdb # 34: usage_00124.pdb # 35: usage_00125.pdb # 36: usage_00126.pdb # 37: usage_00127.pdb # 38: usage_00128.pdb # 39: usage_00129.pdb # # Length: 115 # Identity: 29/115 ( 25.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/115 ( 36.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/115 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00003.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00006.pdb 1 -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 58 usage_00011.pdb 1 -DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGS-- 57 usage_00016.pdb 1 -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 58 usage_00017.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00018.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00019.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00020.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00021.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00022.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00023.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00024.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00025.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00026.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00029.pdb 1 --VTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIYYSYGAGSTEKG-DI 57 usage_00034.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00047.pdb 1 -AVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIHYSYGAGSTEKG-DI 58 usage_00048.pdb 1 -AVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIHYSYGAGSTEKG-DI 58 usage_00081.pdb 1 -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 58 usage_00082.pdb 1 --VTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 57 usage_00084.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 58 usage_00085.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 58 usage_00087.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00088.pdb 1 MKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEG-DI 59 usage_00089.pdb 1 -GITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKG-EV 58 usage_00092.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00106.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00114.pdb 1 VKVTQSSRYLVKRTGEKVFLECVQDMDHENMFWYRQDPGLGLRLIYFSYDVKMKEKG-DI 59 usage_00115.pdb 1 -AVTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGAGNLQIG-DV 58 usage_00121.pdb 1 --VTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKG-DI 57 usage_00122.pdb 1 --VTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKG-DI 57 usage_00123.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKG-DI 58 usage_00124.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKG-DI 58 usage_00125.pdb 1 --VTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKG-DI 57 usage_00126.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKG-DI 58 usage_00127.pdb 1 -GITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKG-EV 58 usage_00128.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 usage_00129.pdb 1 AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKG-DI 59 tQ pR v tG v L C Q H MyWYrQD G L LI SY G usage_00001.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00003.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00006.pdb 59 PDGYKASRPSQENFSLILELATPSQTSVYFCASGD------RLFFGHGTKLSVLG 107 usage_00011.pdb 58 -SESTVSRIRTEHFPLTLESARPSHTSQYLCASSEFT--QETQYFGPGTRLLVLE 109 usage_00016.pdb 59 PDGYKASRPSQENFSLILELATPSQTSVYFCASGGG---GTLYFGAG-TRLSVLE 109 usage_00017.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00018.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00019.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00020.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00021.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00022.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00023.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00024.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00025.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00026.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00029.pdb 58 PDGYKASRPSQENFSLTLESATPSQTSVYFCASGGG---GTLYFGAG-TRLSVLS 108 usage_00034.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00047.pdb 59 PDGYKASRPSQENFSLILESATPSQTSVYFCASGGG---GTLYFGAG-TRLSVL- 108 usage_00048.pdb 59 PDGYKASRPSQENFSLILESATPSQTSVYFCASGGG---GTLYFGAG-TRLSVL- 108 usage_00081.pdb 59 PDGYKASRPSQENFSLILELATPSQTSVYFCASGD------EQFFGPGTRLTVLE 107 usage_00082.pdb 58 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDA---AEQFFGPG-TRLTVLE 108 usage_00084.pdb 59 PDGYKASRPSQEQFSLILESATPSQTSVYFCASGGG---GTLYFGAG-TRLSVL- 108 usage_00085.pdb 59 PDGYKASRPSQEQFSLILESATPSQTSVYFCASGGG---GTLYFGAG-TRLSVL- 108 usage_00087.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVL- 110 usage_00088.pdb 60 PKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSFG---REQYFGPG-TRLTVLE 110 usage_00089.pdb 59 SDGYSVSRSKTEDFLLTLESATSSQTSVYFCAISEV-GVGQPQHFGDGTRLSILE 112 usage_00092.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00106.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00114.pdb 60 PEGYSVSREKKERFSLILESASTNQTSMYLCASSST-GLPYGYTFGSGTRLTVVE 113 usage_00115.pdb 59 PDGYKATRTTQEDFFLLLELASPSQTSLYFCASSDA---PGQLYFGEGSKLTVLE 110 usage_00121.pdb 58 PDGYKASRPSQENFSLILELASLSQTAVYFCASRLG---GYEQYFGPGTRLTVL- 108 usage_00122.pdb 58 PDGYKASRPSQENFSLILELASLSQTAVYFCASRLG---GYEQYFGPGTRLTVL- 108 usage_00123.pdb 59 PDGYEASRPSHEQFSLILVSATPSQSSVYFCASGVG---GTLYFGAG-TRLSVL- 108 usage_00124.pdb 59 PDGYEASRPSHEQFSLILVSATPSQSSVYFCASGVG---GTLYFGAG-TRLSVL- 108 usage_00125.pdb 58 PDGYEASRPSHEQFSLILVSATPSQSSVYFCASGVG---GTLYFGAG-TRLSVL- 107 usage_00126.pdb 59 PDGYEASRPSHEQFSLILVSATPSQSSVYFCASGVG---GTLYFGAG-TRLSVL- 108 usage_00127.pdb 59 SDGYSVSRSKTEDFLLTLESATSSQTSVYFCAISEV-GVGQPQHFGDGTRLSILE 112 usage_00128.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 usage_00129.pdb 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDE---GYTQYFGPGTRLLVLE 111 gy sR E F L L A q Y CA t L l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################