################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:43 2021 # Report_file: c_1023_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00870.pdb # 2: usage_00928.pdb # 3: usage_00929.pdb # 4: usage_00930.pdb # 5: usage_00931.pdb # 6: usage_00932.pdb # 7: usage_01229.pdb # # Length: 78 # Identity: 15/ 78 ( 19.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 78 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 78 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00870.pdb 1 -GRVIATGR----LQEIAREAVMNVSAIIKKYTG--RD-ISNMDVHIQFVGTYE-GVEGD 51 usage_00928.pdb 1 GKLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 57 usage_00929.pdb 1 -KLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 56 usage_00930.pdb 1 GKLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 57 usage_00931.pdb 1 GKLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 57 usage_00932.pdb 1 -KLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 56 usage_01229.pdb 1 -KLSLTG-QLGEVMKESAQAALTYLRAHT-QDYGLPEDFYNKVDLHVHVPDG-ATPKDGP 56 klsltg q mkEsAqaAltylrAht qdyG eD ynkvDlHvhvpdg a pkdGp usage_00870.pdb 52 SA--SISIATAVISAIEG 67 usage_00928.pdb 58 --SAGITMATAIASALS- 72 usage_00929.pdb 57 --SAGITMATAIASALSR 72 usage_00930.pdb 58 --SAGITMATAIASALSR 73 usage_00931.pdb 58 --SAGITMATAIASALSR 73 usage_00932.pdb 57 --SAGITMATAIASALSR 72 usage_01229.pdb 57 --SAGITMATAIASALS- 71 gItmATAiaSAls #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################