################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:11 2021 # Report_file: c_0669_106.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00130.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00512.pdb # 5: usage_00966.pdb # 6: usage_00967.pdb # 7: usage_01312.pdb # 8: usage_01418.pdb # 9: usage_01590.pdb # 10: usage_01596.pdb # 11: usage_01597.pdb # # Length: 58 # Identity: 46/ 58 ( 79.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 58 ( 84.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 58 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00130.pdb 1 PCKSLVKWESENKMVCEQKLL-KGEGPKTSWTRELTNDGELILTMTADDVVCTRVYVR 57 usage_00139.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELIDTMTADDVVCTKVFV- 54 usage_00140.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELIDTMTADDVVCTKVFVR 55 usage_00512.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTRELTNDGELILTMTADDVVCTKVFV- 54 usage_00966.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTMELTNDGELILTMTADDVVCTRVYVR 55 usage_00967.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTMELTNDGELILTMTADDVVCTRVYV- 54 usage_01312.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELIETMTADDVVCTKVFV- 54 usage_01418.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTRELTNDGELILTMTADDVVCTRVYVR 55 usage_01590.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELILTMTADDVVCTKVYVR 55 usage_01596.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELILTMTADDVVCTKVYV- 54 usage_01597.pdb 1 --KSLVKWESENKMVCEQKLLKGEG-PKTSWTLELTNDGELILTMTADDVVCTKVYVR 55 KSLVKWESENKMVCEQKLL geg PKTSWT ELTNDGELI TMTADDVVCT V V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################