################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:40:43 2021 # Report_file: c_0606_19.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00054.pdb # 9: usage_00055.pdb # 10: usage_00056.pdb # 11: usage_00057.pdb # 12: usage_00058.pdb # 13: usage_00059.pdb # 14: usage_00060.pdb # 15: usage_00061.pdb # 16: usage_00062.pdb # 17: usage_00063.pdb # 18: usage_00064.pdb # 19: usage_00065.pdb # 20: usage_00246.pdb # 21: usage_00247.pdb # 22: usage_00255.pdb # 23: usage_00256.pdb # 24: usage_00257.pdb # 25: usage_00258.pdb # 26: usage_00259.pdb # 27: usage_00260.pdb # 28: usage_00302.pdb # 29: usage_00303.pdb # 30: usage_00304.pdb # 31: usage_00305.pdb # 32: usage_00308.pdb # 33: usage_00309.pdb # 34: usage_00310.pdb # # Length: 88 # Identity: 74/ 88 ( 84.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 88 ( 84.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 88 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00002.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00003.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00004.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00005.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00011.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00012.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00054.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00055.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00056.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00057.pdb 1 -HFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 59 usage_00058.pdb 1 -HFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 59 usage_00059.pdb 1 THFTHKAFHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00060.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00061.pdb 1 THFTHKAFHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00062.pdb 1 THFTHKAFHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00063.pdb 1 -HFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 59 usage_00064.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00065.pdb 1 -HFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 59 usage_00246.pdb 1 THFDHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00247.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00255.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00256.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00257.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00258.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00259.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00260.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00302.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00303.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00304.pdb 1 THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00305.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00308.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 usage_00309.pdb 1 THFVHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 60 usage_00310.pdb 1 -----------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI 49 SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAI usage_00001.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAAHP 77 usage_00002.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00003.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00004.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00005.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAAH- 76 usage_00011.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00012.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAH- 87 usage_00054.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00055.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAHP 88 usage_00056.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAHP 88 usage_00057.pdb 60 EVTAEGIGRDASDLLRKIKAAQYVAA-- 85 usage_00058.pdb 60 EVTAEGIGRDASDLLRKIKAAQYVAA-- 85 usage_00059.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAH- 87 usage_00060.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAAHP 77 usage_00061.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAHP 88 usage_00062.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAH- 87 usage_00063.pdb 60 EVTAEGIGRDASDLLRKIKAAQYVAAH- 86 usage_00064.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAHP 88 usage_00065.pdb 60 EVTAEGIGRDASDLLRKIKAAQYVAAHP 87 usage_00246.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAA-- 86 usage_00247.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAAHP 77 usage_00255.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVASHP 77 usage_00256.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVASHP 77 usage_00257.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVASHP 88 usage_00258.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVASHP 77 usage_00259.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAS-- 86 usage_00260.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVASHP 77 usage_00302.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAAHP 77 usage_00303.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVASHP 88 usage_00304.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVASHP 88 usage_00305.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAS-- 75 usage_00308.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 usage_00309.pdb 61 EVTAEGIGRDASDLLRKIKAAQYVAAH- 87 usage_00310.pdb 50 EVTAEGIGRDASDLLRKIKAAQYVAA-- 75 EVTAEGIGRDASDLLRKIKAAQYVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################