################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:02 2021 # Report_file: c_0675_53.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00141.pdb # 2: usage_00194.pdb # 3: usage_00277.pdb # 4: usage_00746.pdb # 5: usage_00747.pdb # 6: usage_00792.pdb # 7: usage_00863.pdb # 8: usage_00928.pdb # 9: usage_00930.pdb # # Length: 72 # Identity: 5/ 72 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 72 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 72 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 -DNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIV-S----QDPE 54 usage_00194.pdb 1 GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD------REIRYTLK-A----QG-Q 48 usage_00277.pdb 1 -DNAPAFNQSLYRARVREDAPPGTRVAQVLATDLDE---GLNGEIVYSFGSHNRAGV--- 53 usage_00746.pdb 1 -DNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQII-K----G--- 51 usage_00747.pdb 1 ---APIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQII-K----G--- 49 usage_00792.pdb 1 -DNRPVFSQDVYRVRLPEDLPPGTTVLRLKAMDQDE---GINAEFTYSFL-GVA--N--- 50 usage_00863.pdb 1 ---KPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAIAYTIL-S----QDPE 52 usage_00928.pdb 1 -DNAPVFNPSTYQGQVPENE-VNARIATLKVTDDDAPN-TPAWKAVYTVV-N----D--- 49 usage_00930.pdb 1 -DNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIV-S----QDPE 54 P F E a d d Y usage_00141.pdb 55 LPHK-NMFTVN- 64 usage_00194.pdb 49 --GA-GTFNIG- 56 usage_00277.pdb 54 ---R-ELFALD- 60 usage_00746.pdb 52 ---N-EYFTVDD 59 usage_00747.pdb 50 ---N-EYFTVDD 57 usage_00792.pdb 51 ---K-AQFSLD- 57 usage_00863.pdb 53 LPDK-NMFTIN- 62 usage_00928.pdb 50 ---PDQQFVVVT 58 usage_00930.pdb 55 LPHK-NMFTVN- 64 F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################