################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:41 2021 # Report_file: c_0261_8.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00088.pdb # 6: usage_00089.pdb # 7: usage_00159.pdb # # Length: 128 # Identity: 63/128 ( 49.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/128 ( 88.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/128 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00041.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00042.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00043.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00088.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00089.pdb 1 PQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL 60 usage_00159.pdb 1 PAFVEEL-QKGYRIFLDLKFYDIPQTVAGACRAVAELGVW--NIHISGGRT--ETVVNAL 55 PqFVrEL QrGfdIFLDLKFhDIPnTaAhAvaAaAdLGVW NvHaSGGar taareAL usage_00040.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00041.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00042.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00043.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00088.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00089.pdb 61 VPFGK-DAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEA 119 usage_00159.pdb 56 QSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCR-ATLAKSAGLDGVVCSAQEA 114 vpfgk daPLLIaVTvLTSmeaSDLvdLGmtlspaDyaeR AaLtqkcGLDGVVCSAQEA usage_00040.pdb 120 VRFKQVF- 126 usage_00041.pdb -------- usage_00042.pdb 120 VRFKQVFG 127 usage_00043.pdb 120 VRFKQVF- 126 usage_00088.pdb 120 VRFKQV-- 125 usage_00089.pdb 120 VRFKQVFG 127 usage_00159.pdb 115 ALLRKQF- 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################