################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:54 2021 # Report_file: c_1434_8.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00106.pdb # 2: usage_00107.pdb # 3: usage_01741.pdb # 4: usage_01848.pdb # # Length: 245 # Identity: 101/245 ( 41.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 182/245 ( 74.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/245 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 S-PQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFA 59 usage_00107.pdb 1 ---QTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFA 57 usage_01741.pdb 1 --PQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFA 58 usage_01848.pdb 1 -PQ-TRSLLGVFEEDATAISNYNQ-LYQ-AHRIYDAQNELSAATHLTSKLLKEYEKQRFP 56 TRSLLsVFEEDAgtltdYtn LlQ mqRvYgAQNEmclATqqlSKqLlaYEKQnFa usage_00106.pdb 60 ----DEE--VISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDL 113 usage_00107.pdb 58 LGKGDEE--VISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDL 115 usage_01741.pdb 59 LGKGDEE--VISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDL 116 usage_01848.pdb 57 L------DEVSSTLQQFSKVIDELSSCHAVLSTQLADA--FPITQFKERDLKEILTLKEV 108 ViSTLhyFSKVvDELnllHteLakQLADt lPIiQFrEkDLtEvsTLKdl usage_00106.pdb 114 FGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRK 173 usage_00107.pdb 116 FGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRK 175 usage_01741.pdb 117 FGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRK 176 usage_01848.pdb 109 FQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQT--HYFCALNTLQYKK 166 FglASNeHDlsmakYSRLpKKkENeKVKtEVgkeVaaaRrKQHls qYyCALNaLQYrK usage_00106.pdb 174 QMAMMEPMIGFAHGQINFFKKGAEMF-SKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQ 232 usage_00107.pdb 176 QMAMMEPMIGFAHGQINFFKKGAEMF-SKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQ 234 usage_01741.pdb 177 QMAMMEPMIGFAHGQINFFKKGAEMF-S-------------------------------- 203 usage_01848.pdb 167 KIALLEPLLGYQA-QISFF-KG----SE-------------------NL----------- 190 qmAmmEPmiGfah QInFF KG s usage_00106.pdb 233 QELLS 237 usage_00107.pdb 235 QEL-- 237 usage_01741.pdb ----- usage_01848.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################