################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:39 2021 # Report_file: c_1082_103.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00133.pdb # 2: usage_00134.pdb # 3: usage_00142.pdb # 4: usage_00359.pdb # 5: usage_00787.pdb # # Length: 56 # Identity: 22/ 56 ( 39.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 56 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 56 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 -PLFDVTAVLQFNGATPENEMKWAYIEPERNQFNFTGGDIVAAFSAANDYVLRGHN 55 usage_00134.pdb 1 ---FDVTAVLQFNGATPENEMKWAYIEPERNQFNFTGGDIVAAFSAANDYVLRGHN 53 usage_00142.pdb 1 DSTYTSIAGREFNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHT 56 usage_00359.pdb 1 DSTYTSIAGREFNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHT 56 usage_00787.pdb 1 ----TSIAGREFNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHT 52 A FN T ENEMK EP R QFNF D V N RGH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################