################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:58 2021 # Report_file: c_1265_97.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00242.pdb # 2: usage_00579.pdb # 3: usage_00580.pdb # 4: usage_00902.pdb # 5: usage_00903.pdb # 6: usage_01086.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 45 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 45 ( 55.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00242.pdb 1 QKIALCITGASGVIYGIKLLQVL---E-EL--DFSVDL-VI---S 35 usage_00579.pdb 1 PSIVILG-A---GYGGIVAALGLQKRLN--YNEADITLVNK---- 35 usage_00580.pdb 1 PSIVILG-A---GYGGIVAALGLQKRLN--YNEADITL--V--N- 34 usage_00902.pdb 1 PNVLILG-S---GWGAISFLKHI---D---TKKYNVSI-IS---- 30 usage_00903.pdb 1 PNVLILG-S---GWGAISFLKHI---D---TKKYNVSI-IS---- 30 usage_01086.pdb 1 -RIAVV-----APTYAGGLKKLG------------ANI-VAVN-- 24 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################