################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:05 2021 # Report_file: c_0571_43.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00306.pdb # 2: usage_00307.pdb # 3: usage_00311.pdb # 4: usage_00360.pdb # # Length: 79 # Identity: 22/ 79 ( 27.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 79 ( 72.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 79 ( 17.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00306.pdb 1 LNTLVRGQKLPVFSGSGLPHKELAAQIARQATVLDSSDDFAVVFAAIGITFEEAEFF-ED 59 usage_00307.pdb 1 -NTLVRGQKLPVFSGSGLPHKELAAQIARQATVLDSSDDFAVVFAAIGITFEEAEFF-ED 58 usage_00311.pdb 1 -NTLVRGQKLPVFSGSGLPHKELAAQIARQATVLDSSDDFAVVFAAIGITFEEAEFF-ME 58 usage_00360.pdb 1 AHPLLKGQKIAIFSPPGLPMERLALQIARNV-AK----DKTIIFAAIGVPSDIYKMFIDE 55 ntLvrGQKlpvFSgsGLPhkeLAaQIARqa vl DfavvFAAIGitfeeaefF usage_00306.pdb 60 FRQTGAIDRS-VFNL---- 73 usage_00307.pdb 59 FRQTGAIDRS-VFNL---- 72 usage_00311.pdb 59 DFRQTGAIDRSVM--FMNL 75 usage_00360.pdb 56 FINTKAIMNS-AI--FIS- 70 f t ai s v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################