################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:49 2021 # Report_file: c_0381_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00012.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00071.pdb # 10: usage_00072.pdb # # Length: 102 # Identity: 10/102 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/102 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/102 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTL-Q-----Q-EWICLETLTP 52 usage_00004.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 54 usage_00012.pdb 1 TVVTFSWYLPGNFT--KINLLCQIEICKANS---KKEVRNATIRGAEDSTYHVAVDKLNP 55 usage_00026.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 54 usage_00027.pdb 1 HRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 55 usage_00068.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 54 usage_00069.pdb 1 --CNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 53 usage_00070.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 54 usage_00071.pdb 1 -RCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQ-K---Q-EWICLETLTP 54 usage_00072.pdb 1 -QLELNWNNRF----LNHCLEHLVQYRTDWDH--SWTEQSV-D-Y---R-HKFSL---DG 44 sW Le l p usage_00001.pdb 53 DTQYEFQVRV-PLQGEF-------TTWSPWSQPLAFR----- 81 usage_00004.pdb 55 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 84 usage_00012.pdb 56 YTAYTFRVRCSSKT---------FWKWSRWSDEKRHL----- 83 usage_00026.pdb 55 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFRTKTGH 89 usage_00027.pdb 56 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 85 usage_00068.pdb 55 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 84 usage_00069.pdb 54 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 83 usage_00070.pdb 55 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 84 usage_00071.pdb 55 DTQYEFQVRVKPLQGEF-------TTWSPWSQPLAFR----- 84 usage_00072.pdb 45 QKRYTFRVRSRF-----NPLCGSAQHWSEWSHPIHWG----- 76 t Y F VR WS WS p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################