################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:29 2021 # Report_file: c_0741_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00048.pdb # 2: usage_00150.pdb # 3: usage_00151.pdb # 4: usage_00164.pdb # 5: usage_00252.pdb # 6: usage_00358.pdb # # Length: 69 # Identity: 2/ 69 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 69 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 69 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 --SGMELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRT----------GRYTLIEKW 48 usage_00150.pdb 1 --DEVLFKVYCIDHTYTTIRVPVAASVKEVISAVADKLGSG----------EGLIIVKMN 48 usage_00151.pdb 1 --DEVLFKVYCIDHTYTTIRVPVAASVKEVISAVADKLGSG----------EGLIIVKMN 48 usage_00164.pdb 1 -GEEIFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQYAEE---------DLALVAIT 50 usage_00252.pdb 1 --DEVLFKVYCIDHTYTTIRVPVAASVKEVISAVADKLGSG----------EGLIIVKMN 48 usage_00358.pdb 1 SGDEIFCRVYMPDHSYVTIRSRLSASVQDILGSVTEKLQY---SEEPAGREDSLILVAVS 57 e Vy h y e va k l v usage_00048.pdb 49 RDTERH--- 54 usage_00150.pdb 49 SGGEKVVLK 57 usage_00151.pdb 49 SGGEKVVLK 57 usage_00164.pdb 51 FSGEKHELQ 59 usage_00252.pdb 49 SGGEKVVLK 57 usage_00358.pdb 58 SSGEKVLLQ 66 gEk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################