################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:01:08 2021 # Report_file: c_1119_13.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00081.pdb # 6: usage_00087.pdb # 7: usage_00097.pdb # 8: usage_00098.pdb # 9: usage_00099.pdb # 10: usage_00117.pdb # 11: usage_00122.pdb # 12: usage_00123.pdb # 13: usage_00126.pdb # 14: usage_00127.pdb # 15: usage_00166.pdb # 16: usage_00173.pdb # 17: usage_00190.pdb # 18: usage_00191.pdb # 19: usage_00212.pdb # 20: usage_00233.pdb # 21: usage_00236.pdb # 22: usage_00237.pdb # 23: usage_00258.pdb # 24: usage_00259.pdb # 25: usage_00265.pdb # 26: usage_00268.pdb # 27: usage_00270.pdb # 28: usage_00310.pdb # 29: usage_00347.pdb # # Length: 105 # Identity: 31/105 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/105 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/105 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00049.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00050.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00051.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00081.pdb 1 ------LLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRA 54 usage_00087.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00097.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00098.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00099.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00117.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00122.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00123.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00126.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00127.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00166.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00173.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00190.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00191.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00212.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00233.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00236.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00237.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00258.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00259.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00265.pdb 1 -KPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 59 usage_00268.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00270.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 usage_00310.pdb 1 -------MEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 53 usage_00347.pdb 1 RKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQA 60 mepkFEFavKfNALeLdDsdlaiFiAViilSgDRpGllNVkpiEdiQdnLlqA usage_00048.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVI----- 100 usage_00049.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00050.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQI---------------- 82 usage_00051.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 97 usage_00081.pdb 55 LRTLIMKNHPNEASIFTKLLLKLPDLRSLNNM------------- 86 usage_00087.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET 105 usage_00097.pdb 61 LELQLKLNHPESSQLFAKLLQK----------------------- 82 usage_00098.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 94 usage_00099.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET 105 usage_00117.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00122.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00123.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKK--- 95 usage_00126.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET 105 usage_00127.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 104 usage_00166.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00173.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 101 usage_00190.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 94 usage_00191.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 96 usage_00212.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00233.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 97 usage_00236.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 104 usage_00237.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 104 usage_00258.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 103 usage_00259.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 104 usage_00265.pdb 60 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 100 usage_00268.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 96 usage_00270.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLL-------- 97 usage_00310.pdb 54 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVI----- 93 usage_00347.pdb 61 LELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET 105 LelqlklNHPessqlFaKLLqK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################