################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:36 2021 # Report_file: c_1172_78.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_02420.pdb # 2: usage_02564.pdb # 3: usage_02565.pdb # 4: usage_02566.pdb # 5: usage_02567.pdb # 6: usage_02568.pdb # 7: usage_02569.pdb # 8: usage_02570.pdb # 9: usage_02571.pdb # 10: usage_04399.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 65 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 65 ( 76.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02420.pdb 1 -DVAIENNTLSRYADAGN---ID-TKNNILG-SNVLKSG---KTIVITSITGGIIE---- 47 usage_02564.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02565.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02566.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02567.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02568.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02569.pdb 1 ------------------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 29 usage_02570.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_02571.pdb 1 YASNVNF-----------SLYDNGA----NY-YTVKITYN--G--NPVLIPA----CGGS 36 usage_04399.pdb 1 ---GRDI-----------RSYVIG-----GEFVGAIYRYSNHW---ITN-------TARG 31 v y usage_02420.pdb ----- usage_02564.pdb 37 VCE-- 39 usage_02565.pdb 37 VCE-- 39 usage_02566.pdb 37 VCE-- 39 usage_02567.pdb 37 VCE-- 39 usage_02568.pdb 37 VCE-- 39 usage_02569.pdb 30 VCE-- 32 usage_02570.pdb 37 VCE-- 39 usage_02571.pdb 37 VCE-- 39 usage_04399.pdb 32 GKAEP 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################