################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:21 2021 # Report_file: c_1484_498.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00648.pdb # 2: usage_01078.pdb # 3: usage_01079.pdb # 4: usage_01080.pdb # 5: usage_01081.pdb # 6: usage_01082.pdb # 7: usage_01762.pdb # 8: usage_04449.pdb # 9: usage_04450.pdb # # Length: 62 # Identity: 15/ 62 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 62 ( 66.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 62 ( 33.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00648.pdb 1 --RPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSL----------- 47 usage_01078.pdb 1 RLRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFY---- 56 usage_01079.pdb 1 RLRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 60 usage_01080.pdb 1 RLRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 60 usage_01081.pdb 1 RLRPIVMTSLAFILGVVPLAI------GSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 54 usage_01082.pdb 1 RLRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 60 usage_01762.pdb 1 -LRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 59 usage_04449.pdb 1 -LRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 59 usage_04450.pdb 1 -LRPIVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVS 59 RPivMTslafIlGvvPlai gsqhaIgtgvIGGMvTAtvLai usage_00648.pdb -- usage_01078.pdb -- usage_01079.pdb 61 TL 62 usage_01080.pdb 61 TL 62 usage_01081.pdb 55 TL 56 usage_01082.pdb 61 TL 62 usage_01762.pdb 60 TL 61 usage_04449.pdb 60 TL 61 usage_04450.pdb 60 TL 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################