################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:23 2021 # Report_file: c_0980_44.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00037.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00259.pdb # # Length: 95 # Identity: 11/ 95 ( 11.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 95 ( 32.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 95 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 ---ALFYVN-KLGHLMPIAIQINQEPGPENPIWTPHEEN-------------EHDWMMAK 43 usage_00109.pdb 1 APICLLYKN-LANKIVPIAIQLNQIPGDENPIFLPSD-A-------------KYDWLLAK 45 usage_00110.pdb 1 APICLLYKN-LANKIVPIAIQLNQIPGDENPIFLPSD-A-------------KYDWLLAK 45 usage_00259.pdb 1 -CQGLFYLDARSNQFLPLAIKTN---VGVDLTYTPLD-DKDDWLLAKIMFNNNDLFYSQM 55 L Y n n PiAIq N g enpi P d dw ak usage_00037.pdb 44 FWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNL 78 usage_00109.pdb 46 IWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR-- 78 usage_00110.pdb 46 IWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR-- 78 usage_00259.pdb 56 Y--------------H-VLFHTIPEIVHEAAFRT- 74 H lrtHl E f a R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################