################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:31 2021 # Report_file: c_1403_95.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00418.pdb # 2: usage_00489.pdb # 3: usage_00490.pdb # 4: usage_00491.pdb # 5: usage_00492.pdb # 6: usage_00493.pdb # 7: usage_00494.pdb # 8: usage_00495.pdb # 9: usage_00567.pdb # 10: usage_00568.pdb # 11: usage_00649.pdb # 12: usage_01303.pdb # # Length: 53 # Identity: 14/ 53 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 53 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 53 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00418.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00489.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00490.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00491.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00492.pdb 1 ----------------PFAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 36 usage_00493.pdb 1 YMFLECILFITEMKTGPFAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 52 usage_00494.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00495.pdb 1 ---LECILFITEMKTGPFAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 49 usage_00567.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_00568.pdb 1 -----------------LRWHSPMLDDISG-VKTWSKVAEGMIKMYKAEVLSK 35 usage_00649.pdb 1 -----------------FAEHSNQLWNISA-VPSWSKVNQGLIRMYKAECLEK 35 usage_01303.pdb 1 -----------------FEEHSPILYDIAVTVPRWSKVCKGLLKMYSVEVEKK 36 f eHS L Is Vp WSKV Gli MYkaE l K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################