################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:23 2021 # Report_file: c_1089_78.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00147.pdb # 2: usage_00364.pdb # 3: usage_00404.pdb # 4: usage_00430.pdb # 5: usage_00431.pdb # 6: usage_00611.pdb # 7: usage_00612.pdb # 8: usage_00613.pdb # 9: usage_00625.pdb # 10: usage_00660.pdb # 11: usage_00661.pdb # 12: usage_01061.pdb # 13: usage_01090.pdb # 14: usage_01092.pdb # 15: usage_01093.pdb # 16: usage_01094.pdb # 17: usage_01095.pdb # 18: usage_01096.pdb # 19: usage_01097.pdb # 20: usage_01098.pdb # 21: usage_01099.pdb # 22: usage_01100.pdb # 23: usage_01101.pdb # 24: usage_01135.pdb # 25: usage_01136.pdb # 26: usage_01549.pdb # 27: usage_01718.pdb # 28: usage_01719.pdb # # Length: 119 # Identity: 60/119 ( 50.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/119 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/119 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00147.pdb 1 VGSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 60 usage_00364.pdb 1 --DILAEGVKKMMDLFKELKRLKTTDRSLIWNSDLTESLELQNLMLNATQTIVAAENRKE 58 usage_00404.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00430.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00431.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00611.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00612.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00613.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00625.pdb 1 -GDILAEGVKKMMDLSKELKRLKTTDRSLIWNSDLTESLELQNLMLNATQTIVAAENRKE 59 usage_00660.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_00661.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01061.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01090.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01092.pdb 1 -GSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01093.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01094.pdb 1 --SILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKE 58 usage_01095.pdb 1 -----------------DLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 43 usage_01096.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01097.pdb 1 VGSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 60 usage_01098.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01099.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01100.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01101.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01135.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01136.pdb 1 -----------------DLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 43 usage_01549.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01718.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 usage_01719.pdb 1 -GSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKE 59 L LKT DR WN DL E LELQNLML A QTI AE RKE usage_00147.pdb 61 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 119 usage_00364.pdb 59 SRGAHARDDFPKREDEYDYSKPIEGQTKRPFEKHWRKHTLTKQDPRTGHITLDYRP--- 114 usage_00404.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_00430.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00431.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00611.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00612.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00613.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00625.pdb 60 SRGAHARDDFPKREDEYDYSKPIEGQTKRPFEKHWRKHTLTKQDPRTGHITLDYRP--- 115 usage_00660.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_00661.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVID 118 usage_01061.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01090.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 118 usage_01092.pdb 60 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRP--- 115 usage_01093.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01094.pdb 59 SRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKY----- 112 usage_01095.pdb 44 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 97 usage_01096.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 118 usage_01097.pdb 61 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 114 usage_01098.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01099.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01100.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01101.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01135.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 118 usage_01136.pdb 44 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 102 usage_01549.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEYRPVID 118 usage_01718.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 usage_01719.pdb 60 SRGAHAREDFKERVDEYDYSKPIQGQQKKPFQEHWRKHTLSYVDVKTGKVSLEY----- 113 SRGAHAR D R DE DYSKP GQ K PF HWRKHTL D G L Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################