################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:52:50 2021 # Report_file: c_0892_14.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00004.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00039.pdb # 5: usage_00043.pdb # 6: usage_00048.pdb # 7: usage_00064.pdb # 8: usage_00090.pdb # 9: usage_00109.pdb # 10: usage_00110.pdb # 11: usage_00158.pdb # 12: usage_00179.pdb # 13: usage_00180.pdb # 14: usage_00181.pdb # 15: usage_00184.pdb # 16: usage_00186.pdb # 17: usage_00187.pdb # # Length: 81 # Identity: 63/ 81 ( 77.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 81 ( 77.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 81 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00013.pdb 1 -VEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 59 usage_00014.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00039.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00043.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00048.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00064.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00090.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00109.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00110.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00158.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00179.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00180.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00181.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00184.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00186.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 usage_00187.pdb 1 RVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV 60 VEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKV usage_00004.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00013.pdb 60 FADYEEYVKCQERVSALYKNP 80 usage_00014.pdb 61 FADYEEYVKCQERVSALYK-- 79 usage_00039.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00043.pdb 61 FADYEEYVKCQERVSALYK-- 79 usage_00048.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00064.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00090.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00109.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00110.pdb 61 FADYEEYVKCQERVSALY--- 78 usage_00158.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00179.pdb 61 FADY----------------- 64 usage_00180.pdb 61 FADYEEYVKCQERVSALYK-- 79 usage_00181.pdb 61 FADYEEYVKCQERVSALYK-- 79 usage_00184.pdb 61 FADYEEYVKCQERVSALYK-- 79 usage_00186.pdb 61 FADYEEYVKCQERVSALYKNP 81 usage_00187.pdb 61 FADYEEYVKCQERVSALYKNP 81 FADY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################