################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:28 2021 # Report_file: c_0577_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00060.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00079.pdb # 8: usage_00084.pdb # 9: usage_00085.pdb # # Length: 85 # Identity: 19/ 85 ( 22.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 85 ( 74.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 85 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFAVNPKGQVP 53 usage_00002.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFAVNPKGQVP 53 usage_00060.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFSVNPKGQVP 53 usage_00061.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFSVNPKGQVP 53 usage_00062.pdb 1 FQSMKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFSVNPKGQVP 56 usage_00063.pdb 1 --SMKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFSVNPKGQVP 54 usage_00079.pdb 1 ---GTLYILPPSP-RSAWLPKLAKYLGLEINVKSL---------EVED-FKSKFPLGKAP 46 usage_00084.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSVDLMKKRLEN-GDD-YFAVNPKGQVP 53 usage_00085.pdb 1 ---MKLFYKP--GACSLASHITLRESGKDFTLVSV-------------DYFAVNPKGQVP 42 mkLfykP g cSlashitlresGkdftlvSv yf vnPkGqvP usage_00001.pdb 54 ALLLDDGTLLTEGVAIMQYLADSVP 78 usage_00002.pdb 54 ALLLDDGTLLTEGVAIMQYLADSVP 78 usage_00060.pdb 54 ALLLDDGTLLTEGVAIMQYLADSV- 77 usage_00061.pdb 54 ALLLDDGTLLTEGVAIMQYLADSV- 77 usage_00062.pdb 57 ALLLDDGTLLTEGVAIMQYLADSV- 80 usage_00063.pdb 55 ALLLDDGTLLTEGVAIMQYLADSVP 79 usage_00079.pdb 47 AFEGSDGFRLTETLAIIKYFIDSS- 70 usage_00084.pdb 54 ALLLDDGTLLTEGVAIMQYLADSV- 77 usage_00085.pdb 43 ALLLDDGTLLTEGVAIMQYLADSV- 66 AllldDGtlLTEgvAImqYlaDSv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################