################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:53 2021 # Report_file: c_0774_12.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00025.pdb # 3: usage_00026.pdb # 4: usage_00029.pdb # 5: usage_00057.pdb # 6: usage_00059.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # 9: usage_00075.pdb # 10: usage_00121.pdb # 11: usage_00137.pdb # 12: usage_00139.pdb # 13: usage_00140.pdb # 14: usage_00174.pdb # # Length: 68 # Identity: 15/ 68 ( 22.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 68 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 68 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 57 usage_00025.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI-AYGGVQEKFGV 57 usage_00026.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI-AYGGVQEKFGV 57 usage_00029.pdb 1 -GVILEPVVGNAGFIPPDAGFLEGLRELTKQYGALLVFDEVMTGF-RI-AYGGAQEKFGV 57 usage_00057.pdb 1 AAVIVEPVLANAGVIPPAPGFLQLLRELTGRSGAMLVFDEVITGF-RV-ARGGAQERYGV 58 usage_00059.pdb 1 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 58 usage_00073.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 57 usage_00074.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 57 usage_00075.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 57 usage_00121.pdb 1 AVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSR-LA-PHGLANKLGI- 57 usage_00137.pdb 1 AGVIVEPVAGNMGVVPPQEGFLQGLRDITEQYGSLLIFDEVMTGF-RV-DYNCAQGYFGV 58 usage_00139.pdb 1 AAVIVEPMSGSAGVLVPPVGYLQRLREICDQHNILLIFDEVITAFGRLGT-YSGAEYFGV 59 usage_00140.pdb 1 AAVIVEPMSGSAGVLVPPVGYLQRLREICDQHNILLIFDEVITAFGRLGT-YSGAEYFGV 59 usage_00174.pdb 1 -GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RI-AYGGVQEKFGV 57 Vi EP g G p g L LRe lL FDEV T f r g usage_00002.pdb 58 TPDLTTLG 65 usage_00025.pdb 58 TPDLTTLG 65 usage_00026.pdb 58 TPDLTTLG 65 usage_00029.pdb 58 TPDLTTLG 65 usage_00057.pdb 59 EPDLTVLS 66 usage_00059.pdb 59 TPDLTTLG 66 usage_00073.pdb 58 TPDLTTLG 65 usage_00074.pdb 58 TPDLTTLG 65 usage_00075.pdb 58 TPDLTTLG 65 usage_00121.pdb 58 RSDLTTLG 65 usage_00137.pdb 59 TPDLTCLG 66 usage_00139.pdb 60 TPDLMNVA 67 usage_00140.pdb 60 TPDLMNVA 67 usage_00174.pdb 58 TPDLTTLG 65 pDL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################