################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:47 2021 # Report_file: c_0545_88.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00143.pdb # 2: usage_00163.pdb # 3: usage_00164.pdb # 4: usage_00975.pdb # 5: usage_00976.pdb # 6: usage_00977.pdb # 7: usage_00978.pdb # # Length: 128 # Identity: 20/128 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/128 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/128 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 --SVEQLRKEGNELFKCGDYGGALAAYTQALGLD-ATPQDQAVLHRNRAACHLKLEDYDK 57 usage_00163.pdb 1 -EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH----NHVLYSNRSAAYAKKGDYQK 55 usage_00164.pdb 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH----NHVLYSNRSAAYAKKGDYQK 56 usage_00975.pdb 1 -QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPY----NPVLPTNRASAYFRLKKFAV 55 usage_00976.pdb 1 -QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPY----NPVLPTNRASAYFRLKKFAV 55 usage_00977.pdb 1 -QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPY----NPVLPTNRASAYFRLKKFAV 55 usage_00978.pdb 1 --KALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPY----NPVLPTNRASAYFRLKKFAV 54 LkekGNk G d A cY D n VL NR ay usage_00143.pdb 58 AETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 117 usage_00163.pdb 56 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 115 usage_00164.pdb 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ--- 113 usage_00975.pdb 56 AESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKIS 115 usage_00976.pdb 56 AESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKIS 115 usage_00977.pdb 56 AESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKIS 115 usage_00978.pdb 55 AESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKIS 114 A d v l K ysR aA L eeAk ye l E nN L usage_00143.pdb 118 G------- 118 usage_00163.pdb 116 A------- 116 usage_00164.pdb -------- usage_00975.pdb 116 QALASK-- 121 usage_00976.pdb 116 QALASKEN 123 usage_00977.pdb 116 QALAS--- 120 usage_00978.pdb 115 QALAS--- 119 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################