################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:14 2021 # Report_file: c_0031_13.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00039.pdb # 3: usage_00101.pdb # 4: usage_00102.pdb # # Length: 245 # Identity: 72/245 ( 29.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 177/245 ( 72.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/245 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 VG--------IAPTKSSERWVADGQN-VDQFKAFGYDTDLQYGDDVVQNQVSQIEN-ITK 50 usage_00039.pdb 1 -----DLTIGSIDDLRLERWQKDRDIFVKKAESLGAKVLVQSANGDDSAQISQIEN-LNK 54 usage_00101.pdb 1 --KEVKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 57 usage_00102.pdb 1 ---EVKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 56 iddlrlERWqkDrdi VkkaeslGakv vQsang Q SQIEN in usage_00007.pdb 51 GVKLLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANY 110 usage_00039.pdb 55 NVDVLVIIPHNGDVLSNVISEAKKEGVKVLAYDRLINNAD-LDFYVSFDNEKVGELQADA 113 usage_00101.pdb 58 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA 116 usage_00102.pdb 57 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA 115 gVdvLVIiP nG vLsNv eAk egikVlaYDR In ad DfY sFDNeKVGeLQA a usage_00007.pdb 111 IVDTLGVADGKGPFNLELFAGSPDDNNATYFFQGA-SVLQPYIDSGKLVVKSGQTTFDQI 169 usage_00039.pdb 114 IIKEK-P----E-GNYFL-GGSPVDNNAKLFRKGQ-KVLQPLIDSGKIKVVG------DQ 159 usage_00101.pdb 117 LVDIV-P----Q-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG------DQ 164 usage_00102.pdb 116 LVDIV-P----Q-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG------DQ 163 vd p gNyfL gGSPvDNNAklFr Gq kVL Py DSGKikVvg dq usage_00007.pdb 170 ATLRWDGGLAQSR-DNLLSQAYTSG-RVDAVLSPYDGISRGVISALKSAGYGNAAKPLPI 227 usage_00039.pdb 160 WVDSWLAEKALQI-ENALTANK---NNIDAVVASNDATAGGAIQALSAQGLSG----KVA 211 usage_00101.pdb 165 WVDGWLPENALKIMENALTANN---NKIDAVVASNDATAGGAIQALSAQGLSG----KVA 217 usage_00102.pdb 164 WVDGWLPENALKIMENALTANN---NKIDAVVASNDATAGGAIQALSAQGLSG----KVA 216 wvd Wl e Al i eNaLtan iDAVvasnDatagGaIqALsaqGlsg kva usage_00007.pdb 228 VTGQ- 231 usage_00039.pdb 212 ISGQD 216 usage_00101.pdb 218 ISGQ- 221 usage_00102.pdb 217 ISGQD 221 isGQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################