################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:19 2021 # Report_file: c_1065_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00008.pdb # 4: usage_00110.pdb # 5: usage_00111.pdb # 6: usage_00112.pdb # 7: usage_00141.pdb # 8: usage_00198.pdb # 9: usage_00217.pdb # 10: usage_00223.pdb # # Length: 75 # Identity: 30/ 75 ( 40.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 75 ( 57.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 75 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 PLYRHIAQLAGN--SDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGA 58 usage_00005.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGG-----ALALQEFMIAPTGAKTFAEALRIGS 54 usage_00008.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00110.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00111.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00112.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00141.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00198.pdb 1 -LYKYIATLAGK--DKMVMPVPFFNVINGGEHAGNGLALQEFLIAPVGAPNIREAIRYGS 57 usage_00217.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 usage_00223.pdb 1 -LYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGS 59 LYkh A L s vlPVPf NV NGG LAlQEFmIaP GA f eA R Gs usage_00004.pdb 59 EVYHTLKGVIKDKYG 73 usage_00005.pdb 55 EVYHNLKSLTKKR-- 67 usage_00008.pdb 60 EVYHNLKSLTKKR-- 72 usage_00110.pdb 60 EVYHNLKSLTKKR-- 72 usage_00111.pdb 60 EVYHNLKSLTKKR-- 72 usage_00112.pdb 60 EVYHNLKSLTKKR-- 72 usage_00141.pdb 60 EVYHNLKSLTKK--- 71 usage_00198.pdb 58 ETYHHLKNVIKNKYG 72 usage_00217.pdb 60 EVYHNLKSLTKKR-- 72 usage_00223.pdb 60 EVYHNLKSLTKKR-- 72 EvYH LK K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################