################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:29 2021 # Report_file: c_0801_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00008.pdb # 2: usage_00031.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00050.pdb # 8: usage_00051.pdb # 9: usage_00120.pdb # 10: usage_00121.pdb # 11: usage_00135.pdb # # Length: 109 # Identity: 39/109 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/109 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/109 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -----------LAGSEKVSKTGAEGAVLDEAKNI--NKSLSALGNVISALAE-GS--TYV 44 usage_00031.pdb 1 QKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNI--NKSLSALGNVISALAE-GS--TYV 55 usage_00045.pdb 1 KKLSGKLYLVDLAGSEK-------------------NKSLSALGNVISALAE-GT-KTHV 39 usage_00046.pdb 1 KKLSGKLYLVDLAGSEKVSKTGAE----------GANKSLSALGNVISALAE-GT-KTHV 48 usage_00048.pdb 1 SSFRSKLHLVDLAGSERQKKTKAEGDRLREGINI--NRGLLCLGNVISALGD-DKKGNFV 57 usage_00049.pdb 1 KKLSGKLYLVDLAGSEKN---------------I--NKSLSALGNVISALADGN--KTHI 41 usage_00050.pdb 1 KKLSGKLYLVDLAGSEK----------------I--NKSLSALGNVISALAD-GN-KTHI 40 usage_00051.pdb 1 KKLSGKLYLVDLAGSEKV--------------NI--NKSLSALGNVISALAD-GN-KTHI 42 usage_00120.pdb 1 KKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNI--NKSLSALGNVISALAE-GT--THV 55 usage_00121.pdb 1 KKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNI--NKSLSALGNVISALAE-GT--THV 55 usage_00135.pdb 1 KKLSGKLYLVDLAGSEKVSKTGAE-----------GNKSLSALGNVISALAE-GT-KTHV 47 LAGSEk NksLsaLGNVISALa t usage_00008.pdb 45 PYRDSKMTRILQDSLGGNARTTIVICCSPSSYNESETKSTLLFGQRAK- 92 usage_00031.pdb 56 PYRDSKMTRILQDSLGGNARTTIVICCSPSSYNESETKSTLLFGQRAK- 103 usage_00045.pdb 40 PYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAK- 87 usage_00046.pdb 49 PYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAK- 96 usage_00048.pdb 58 PYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRAR- 105 usage_00049.pdb 42 PYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAK- 89 usage_00050.pdb 41 PYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAK- 88 usage_00051.pdb 43 PYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAK- 90 usage_00120.pdb 56 PYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFAA---- 100 usage_00121.pdb 56 PYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAK- 103 usage_00135.pdb 48 PYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKT 96 PYRDSK TRiLQ SLGGN rTtiviCcSP Ne ETksTL f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################