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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:28:16 2021
# Report_file: c_0487_35.html
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#====================================
# Aligned_structures: 6
#   1: usage_00023.pdb
#   2: usage_00075.pdb
#   3: usage_00088.pdb
#   4: usage_00099.pdb
#   5: usage_00117.pdb
#   6: usage_00237.pdb
#
# Length:        111
# Identity:        4/111 (  3.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/111 (  9.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/111 ( 24.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00023.pdb         1  RIGYIVA-NKDF-KRVAAFST-PW-AVNALAIEAAKFILIH----P--AQF-TLPIRKWQ   49
usage_00075.pdb         1  RVGCLITRNEELISHA-KL-AQGRLAPPLLEQIGSVGLLNLD---D--SFFDF-VRETYR   52
usage_00088.pdb         1  RVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLA---RREGFYEA-LREGYR   55
usage_00099.pdb         1  -IGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASR--AFVEM-AREAYR   55
usage_00117.pdb         1  -IGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---D--AWVAA-LRNSLR   52
usage_00237.pdb         1  RVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLA---RREGFYEA-LREGYR   55
                             G       e                    q      L                r   r

usage_00023.pdb        50  RNTVDFITALNRLDGVE-VHPS-GTTFFLLRLK---KGTAAELKKY-----   90
usage_00075.pdb        53  ERVETVLKKLEEHG-LKRFTKPSGAFYITAELP---VEDAEEFARW-----   94
usage_00088.pdb        56  RRRDLLAGGLRAMG-LR-VYVPEGTYFLMAELP---GWDAFRLVEE-----   96
usage_00099.pdb        56  RRRDLLLEGLTALG-LK-AVRPSGAFYVLMDTSPIA-PDEVRAAERLLEAG  103
usage_00117.pdb        53  ARRDRLAAGLTEIG-FA-VHDSYGTYFLCADPRPLGYDDSTEFCAA-----   96
usage_00237.pdb        56  RRRDLLAGGLRAMG-LR-VYVPEGTYFLMAELP---GWDAFRLVEEAR---   98
                            r       L   g         G              d            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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