################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:10 2021 # Report_file: c_1471_128.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00177.pdb # 2: usage_00178.pdb # 3: usage_00179.pdb # 4: usage_00180.pdb # 5: usage_00181.pdb # 6: usage_00784.pdb # 7: usage_01127.pdb # 8: usage_01682.pdb # # Length: 29 # Identity: 0/ 29 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 29 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 29 ( 58.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 -----SIDRAVYALKKCN-GIVE--E--- 18 usage_00178.pdb 1 -----SIDRAVYALKKCN-GIVE--E--- 18 usage_00179.pdb 1 -----SIDRAVYALKKCN-GIVE--E--- 18 usage_00180.pdb 1 -----SIDRAVYALKKCN-GIVE--E--- 18 usage_00181.pdb 1 ------IDRAVYALKKCN-GIVE--EAT- 19 usage_00784.pdb 1 KKFWKTVKKALDALEKYD-GLFTFGIVPT 28 usage_01127.pdb 1 ------VEYAMKKC-P-NGMFSE--I--- 16 usage_01682.pdb 1 --------TVRAACDWAG-IKQE------ 14 a a e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################