################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:10 2021 # Report_file: c_1135_181.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00282.pdb # 2: usage_01329.pdb # 3: usage_01330.pdb # # Length: 98 # Identity: 9/ 98 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 98 ( 62.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 98 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00282.pdb 1 ----ALPALVQLLSS-PNEQILQE-------ALWALSNIASGGN-EQIQ-----AVIDAG 42 usage_01329.pdb 1 NITQAAEQAIRLWFNTP-------DPQ-RL-HAKTIRTWIRQDKFAQVDQAN-PNCVQ-Q 49 usage_01330.pdb 1 NITQAAEQAIRLWFNTP-------DPMQRLHMAKTIRTWIRQDKFAQVDQANMPNCVQ-Q 52 AaeqairLwfn P aktirtwirqdk aQvd ncvq q usage_00282.pdb 43 ALPALVQLLSSP---------NEQILQEALWALSNIAS 71 usage_01329.pdb 50 ILNIIYDGLKP-QPVQLPISYYAQLWYNLLDILRRFTF 86 usage_01330.pdb 53 ILNIIYDGLKP-QPVQLPISYYAQLWYNLLDILRRFTF 89 iLniiydgLkp yaQlwynlLdiLrrftf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################