################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:13 2021 # Report_file: c_0183_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00016.pdb # 2: usage_00039.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00051.pdb # # Length: 179 # Identity: 16/179 ( 8.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/179 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/179 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 --PAISIDQKT---------RSTVGTVTEIYSV-----IR-------DRLGFLQNV---- 33 usage_00039.pdb 1 EIRPVVKPQ--YVDLLPKAVKGKVRELLK----KVDEVG--------KFEEVVKEL---- 42 usage_00044.pdb 1 --KIVHKIQ--YVEYASKFLKGTVNEILT----KIDERG--------KKDEVKELL---- 40 usage_00045.pdb 1 --ILSYKPQ--RI-F-P-NYDGTVQQYLE----NAS--KDALSTSSWFFEEVTKRL---- 43 usage_00051.pdb 1 KLNVSMKPQ--KI-A-P-KFPGTVRQLFF----KKI--RGQFL------NPQFQTDVVKP 43 k Q gtV usage_00016.pdb 34 -GLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLK 92 usage_00039.pdb 43 -ELE-NVLDRELHQLSGGELQRVAIAAALLRKA--HFYFFDEPSSYLDIRQRLKVARVIR 98 usage_00044.pdb 41 -NMT-NLWNKDANILSGGGLQRLLVAASLLREA--DVYIFDQPSSYLDVRERMNMAKAIR 96 usage_00045.pdb 44 -NLH-RLLESNVNDLSGGELQKLYIAATLAKEA--DLYVLDQPSSYLDVEERYIVAKAIK 99 usage_00051.pdb 44 LRID-DIIDQEVQHLSGGELQRVAIVLALGIPA--DIYLIDEPSAYLDSEQRIICSKVIR 100 LSGGelQr a l a Y D PS yLd r i usage_00016.pdb 93 SMRD-LGNTLIVVEHDEDTMLA-ADYLIDIGPGAGIHGGEVVAAGTPEEVMND------ 143 usage_00039.pdb 99 RLAN-EGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSK-PKGTRNGINEFLQG-- 153 usage_00044.pdb 97 ELLK--NKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSK-SYAARVGINNFLKG-- 150 usage_00045.pdb 100 RVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATS-PVTLKTGMNEFLRELE 157 usage_00051.pdb 101 RFILHNKKTAFIVEHDFIMATYLADKVIVFEGIPSKNAHARA-PESLLTGCNRFLKNLN 158 v HD y D g g g N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################