################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:01 2021 # Report_file: c_0100_15.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00010.pdb # 2: usage_00042.pdb # 3: usage_00098.pdb # # Length: 207 # Identity: 33/207 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 138/207 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/207 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 RAVFFDSLGTLNSVEGAAKSHLKIEEVLGDYPL-NPK---TLLDEYEKLTREAFSNYAGK 56 usage_00042.pdb 1 RAVFFDFVGTLLSVEGEAKTHLKIEEVLGDYPL-NPK---TLLDEYEKLTREAFSNYAGK 56 usage_00098.pdb 1 KAVIYDCDGVFDSFEANLAFYQRIE----GRPRLSRDNEEQ--RILHTYA---------- 44 rAVffD Gtl SvEg ak hlkIE dyPl npk t deyeklt usage_00010.pdb 57 PYR-PLRDILEEVRKLAEKYGFKYP--ENFWEI-----SLRSQRYGEL-YPEVVEVLKSL 107 usage_00042.pdb 57 PYR-PIRDIEEEVRKLAEKYGFKYP--ENFWEI-----HLRHQRYGEL-YPEVVEVLKSL 107 usage_00098.pdb 45 --NRG--------------------DWEEAVRCAGAIDYRELVPL---IEEGFREALDTL 79 r p Enfwei lr qry ypevvEvLksL usage_00010.pdb 108 KGKYHVG-ITDSDTEQAAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGE 166 usage_00042.pdb 108 KGKYHVG-ITDSDTEYLAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGE 166 usage_00098.pdb 80 KGRVGLGVCTNRS-TS-DVLRLFSLDSYFSIV-TASRVTNPKPHPEPLLKVLEHFGIGPR 136 KGkyhvG iTdsd e a LdalgikdlFdsi TseeagffKPHPrifelaLkkaGvkge usage_00010.pdb 167 EAVYVGDNPVKDCGGSKNLGTSIL-LD 192 usage_00042.pdb 167 EAVYVGDNPVKDCGGSKNLGTSIL-LD 192 usage_00098.pdb 137 EALFVGDSE-VDRLSAEAAGVPFVAYK 162 EAvyVGDnp kDcggsknlGtsil ld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################