################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:56 2021 # Report_file: c_1227_48.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00334.pdb # 2: usage_00476.pdb # 3: usage_01355.pdb # 4: usage_01364.pdb # 5: usage_01365.pdb # 6: usage_01367.pdb # 7: usage_01382.pdb # 8: usage_01383.pdb # 9: usage_01880.pdb # 10: usage_01985.pdb # 11: usage_01986.pdb # # Length: 61 # Identity: 21/ 61 ( 34.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 61 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 61 ( 62.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00334.pdb 1 REGVLRTSSEP-------------------------------G-NEMFFEEFNQYLMD-- 26 usage_00476.pdb 1 REGVLRTSSEP--------------------------------YNEMFFEEFNQYLVTSL 28 usage_01355.pdb 1 --GVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMDAL 53 usage_01364.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMDAL 55 usage_01365.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMDAL 55 usage_01367.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMD-- 53 usage_01382.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQKEYSKNYGRYEEG-NEMFFEEFNQYLMDAL 59 usage_01383.pdb 1 REGVLRTSSEPYNS-------CHLTNHCI--------GRYEEG-NEMFFEEFNQYLMDAL 44 usage_01880.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMDAL 55 usage_01985.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQKEYSKNYGRYEEG-NEMFFEEFNQYLMDAL 59 usage_01986.pdb 1 REGVLRTSSEPYNSANFQDKTCHLTNHCIQK----NYGRYEEG-NEMFFEEFNQYLMDAL 55 GVLRTSSEP NEMFFEEFNQYLmd usage_00334.pdb - usage_00476.pdb - usage_01355.pdb - usage_01364.pdb 56 N 56 usage_01365.pdb 56 N 56 usage_01367.pdb - usage_01382.pdb - usage_01383.pdb - usage_01880.pdb - usage_01985.pdb 60 N 60 usage_01986.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################