################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:06:42 2021 # Report_file: c_1374_16.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00399.pdb # 2: usage_00400.pdb # 3: usage_00408.pdb # 4: usage_00409.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # 7: usage_00435.pdb # 8: usage_00436.pdb # 9: usage_00525.pdb # 10: usage_00526.pdb # 11: usage_00527.pdb # 12: usage_00528.pdb # 13: usage_00574.pdb # 14: usage_00575.pdb # 15: usage_00586.pdb # 16: usage_00648.pdb # 17: usage_00663.pdb # 18: usage_00746.pdb # 19: usage_00747.pdb # 20: usage_00824.pdb # 21: usage_00825.pdb # 22: usage_00826.pdb # 23: usage_00827.pdb # 24: usage_00833.pdb # # Length: 74 # Identity: 17/ 74 ( 23.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 74 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 74 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00399.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00400.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00408.pdb 1 GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 60 usage_00409.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00410.pdb 1 GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 60 usage_00411.pdb 1 GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 60 usage_00435.pdb 1 ---------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 51 usage_00436.pdb 1 ---------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 51 usage_00525.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00526.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00527.pdb 1 GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 60 usage_00528.pdb 1 --NRYETVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIG 58 usage_00574.pdb 1 -------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 53 usage_00575.pdb 1 -------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 53 usage_00586.pdb 1 ----LSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 56 usage_00648.pdb 1 ------IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIG 54 usage_00663.pdb 1 -----DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMG 55 usage_00746.pdb 1 ------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 48 usage_00747.pdb 1 ------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 48 usage_00824.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00825.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00826.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00827.pdb 1 -AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 59 usage_00833.pdb 1 --------WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 52 L v GN LVi ai LqT N F SLACADL G usage_00399.pdb 60 LLVVPFGATLVVRG 73 usage_00400.pdb 60 LLVVPFGATLVVRG 73 usage_00408.pdb 61 LLVVPFGATLVV-- 72 usage_00409.pdb 60 LLVVPFGATLVVR- 72 usage_00410.pdb 61 LLVVPFGATLVVR- 73 usage_00411.pdb 61 LLVVPFGATLVVR- 73 usage_00435.pdb 52 LLVVPFGATLVVR- 64 usage_00436.pdb 52 LLVVPFGATLVVR- 64 usage_00525.pdb 60 LLVVPFGATLVVRG 73 usage_00526.pdb 60 LLVVPFGATLVVR- 72 usage_00527.pdb 61 LLVVPFGATLVVRG 74 usage_00528.pdb 59 AFSMNLYTVYIIKG 72 usage_00574.pdb 54 LLVVPFGATLVVRG 67 usage_00575.pdb 54 LLVVPFGATLVVRG 67 usage_00586.pdb 57 LLVVPFGATLVV-- 68 usage_00648.pdb 55 VISMNLFTTYIIMN 68 usage_00663.pdb 56 LAVVPFGAACILMK 69 usage_00746.pdb 49 LLVVPFGATLVVRG 62 usage_00747.pdb 49 LLVVPFGATLVVRG 62 usage_00824.pdb 60 LLVVPFGATLVVRG 73 usage_00825.pdb 60 LLVVPFGATLVVRG 73 usage_00826.pdb 60 LLVVPFGATLVVR- 72 usage_00827.pdb 60 LLVVPFGATLVVR- 72 usage_00833.pdb 53 LLVVPFGATLVVRG 66 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################