################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:53 2021 # Report_file: c_0462_26.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00021.pdb # 2: usage_00496.pdb # 3: usage_00567.pdb # 4: usage_00568.pdb # 5: usage_00569.pdb # 6: usage_00570.pdb # 7: usage_00706.pdb # 8: usage_00879.pdb # 9: usage_00880.pdb # # Length: 155 # Identity: 11/155 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/155 ( 11.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 76/155 ( 49.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 KKAV-----VLHG-RGGTAADIISLQKVLKLD-----EAIYAPQA----TN--------- 36 usage_00496.pdb 1 ----KSLVVLLHG-YGSDGRDLIALGQFWR--DSFPDTMFVAPNA----PH-VC-GGNPF 47 usage_00567.pdb 1 -----ACIIWLHG-LGADRTDFKPVAEALQ--MVLPSTRFILPQA----PSQAV-TVNGG 47 usage_00568.pdb 1 -----ACIIWLHG-LGADRTDFKPVAEALQ--MVLPSTRFILPQA----PSQAV-TVNGG 47 usage_00569.pdb 1 -----ACIIWLHG-LGADRTDFKPVAEALQ--MVLPSTRFILPQA----PSQAV-TVNGG 47 usage_00570.pdb 1 -----ACIIWLHG-LGADRTDFKPVAEALQ--MVLPSTRFILPQA----PSQAV-TVNGG 47 usage_00706.pdb 1 -----SLVVFLHG-YGADGADLLGLAEPLA--PHLPGTAFVAPDA----PE-PC-RANGF 46 usage_00879.pdb 1 ----RFCVIWLH-H------DFVDIVNYFDV--SLDEIRFIFPHAIPVT---IG-MQ--- 40 usage_00880.pdb 1 ----RFCVIWLHGH------DFVDIVNYFDV--SLDEIRFIFPHAIPVT---I-MR---- 40 LH D f P A usage_00021.pdb 37 ---NSWYPYS----FA-PVQ---QNQPAL---------DSALALVGEVV-AEIEAQ-GIP 74 usage_00496.pdb 48 --GYEWFPL-DLE--RDRTL---ARLAGA---------ETAHPVLDAFL-ADLWAQTGLG 89 usage_00567.pdb 48 WVMPSWYDI-LAF--S-PAR--AIDEDQL---------NASADQVIALI-DEQRAK-GIA 90 usage_00568.pdb 48 WVMPSWYDI-LAF--S-PAR--AIDEDQL---------NASADQVIALI-DEQRAK-GIA 90 usage_00569.pdb 48 WVMPSWYDI-LAF--S-PAR--AIDEDQL---------NASADQVIALI-DEQRAK-GIA 90 usage_00570.pdb 48 WVMPSWYDI-LAF--S-PAR--AIDEDQL---------NASADQVIALI-DEQRAK-GIA 90 usage_00706.pdb 47 --GFQWFPI-PWLDGS-SET---AAAEGM---------AAAARDLDAFLDERLAEE-GLP 89 usage_00879.pdb 41 -------------------M--RAWYDIKVVDVEGINS---SIKVNKLI-DSQVNQ-GIA 74 usage_00880.pdb 41 ---------------A-WYDIKVVDVEGI---------NSSIAKVNKLI-DSQVNQ-GIA 73 G usage_00021.pdb 75 AEQIYFAGFSQGACLTLEYTTR-NARKYGGIIAFT 108 usage_00496.pdb 90 PADTILVGFSQGAMMALYTGLR-LPEPLKAIIAFS 123 usage_00567.pdb 91 AERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALS 125 usage_00568.pdb 91 AERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALS 125 usage_00569.pdb 91 AERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALS 125 usage_00570.pdb 91 AERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALS 125 usage_00706.pdb 90 PEALALVGFSQGTMMALHVAPR-RAEEIAGIVGFS 123 usage_00879.pdb 75 SENIILAGFSQGGIIATYTAIT-SQRKLGGIMALS 108 usage_00880.pdb 74 SENIILAGFSQGGIIATYTAIT-SQRKLGGIMALS 107 e l GFSQG g a s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################