################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:52 2021 # Report_file: c_1434_82.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00463.pdb # 2: usage_00545.pdb # 3: usage_00546.pdb # 4: usage_00547.pdb # 5: usage_00924.pdb # 6: usage_00925.pdb # 7: usage_02152.pdb # 8: usage_02153.pdb # 9: usage_02154.pdb # 10: usage_03100.pdb # # Length: 130 # Identity: 8/130 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/130 ( 42.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/130 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00463.pdb 1 -----DFSSIIQTCSGNIQRISQATAQIKNLMSQLG-TKQD-------SSKLQENLQQLQ 47 usage_00545.pdb 1 DRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTA 60 usage_00546.pdb 1 -RFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTA 59 usage_00547.pdb 1 -RFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTA 59 usage_00924.pdb 1 ---MEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILS-------MKEELEELMTDIKRTA 50 usage_00925.pdb 1 --FMEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTDIKRTA 58 usage_02152.pdb 1 DKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETA 60 usage_02153.pdb 1 DKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETA 60 usage_02154.pdb 1 DKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETA 60 usage_03100.pdb 1 ---MDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTA 57 eFf qveeir Id I nv v h il l Lm dik ta usage_00463.pdb 48 HSTNQLAKETNELLKELGSL-PLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSE 106 usage_00545.pdb 61 NKVRSKLKSIEQSIEQEEGLNR--S-SADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRE 117 usage_00546.pdb 60 NKVRSKLKSIEQSIEQEEGLNR--S-SADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRE 116 usage_00547.pdb 60 NKVRSKLKSIEQSIEQEEGLNR--S-SADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRE 116 usage_00924.pdb 51 NKVRGKLKTIELNIEQEE--------SADLRIRKTQYSTISRKFVEVMSDYNTTQ----- 97 usage_00925.pdb 59 NKVRGKLKTIELNIEQ----------SADLRIRKTQYSTISRKFVEVMSDYNTTQIDYRD 108 usage_02152.pdb 61 NEVRKKLKEIEQSIEQEE---K--S-SADLKIRKRQHEELERKFREVMKEYNATQQDYRK 114 usage_02153.pdb 61 NEVRKKLKEIEQSIEQEE---K--S-SADLKIRKRQHEELERKFREVMKEYNATQQDYRK 114 usage_02154.pdb 61 NEVRKKLKEIEQSIEQEE------S-SADLKIRKRQHEELERKFREVMKEYNATQQDYRK 113 usage_03100.pdb 58 NKVRSKLKSIEQSIEQEEGLNR--S-SADLRIRKTQHSTLSRKFVEVMSEYNATQSDYR- 113 n vr klK ie ieq sadl irk Q rkF evm yn tQ usage_00463.pdb 107 KEKESI---- 112 usage_00545.pdb 118 RCKGR----- 122 usage_00546.pdb 117 RCK------- 119 usage_00547.pdb 117 RCKG------ 120 usage_00924.pdb ---------- usage_00925.pdb 109 RCKARIKRQM 118 usage_02152.pdb 115 RARKRNLE-- 122 usage_02153.pdb ---------- usage_02154.pdb 114 RARKRNLE-- 121 usage_03100.pdb ---------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################