################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:46 2021 # Report_file: c_0558_36.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00226.pdb # 2: usage_00240.pdb # 3: usage_00242.pdb # 4: usage_00243.pdb # 5: usage_00244.pdb # 6: usage_00245.pdb # # Length: 94 # Identity: 38/ 94 ( 40.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 94 ( 52.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 94 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00226.pdb 1 TYFKNVFEGHIASQYLHNVGRPDVDD--LGT--SYGEAHLDSEASYFGPSFMINWLHNRY 56 usage_00240.pdb 1 TYFKNVFEGHIASQYLHNVGRPDVD-----------EAHLDSEASYFGPSFMINWLHNRY 49 usage_00242.pdb 1 RYFKNVFEGHTATQYMHSTGREDVISGTNY--DD-PNAELRSEATYFGPSYMIDWLESDA 57 usage_00243.pdb 1 RYFKNVFEGHTATQYMHSTGREDVIS-----YDD-PNAELRSEATYFGPSYMIDWLESDA 54 usage_00244.pdb 1 RYFKNVFEGHTATQYMHSTGREDVISGTNY--DD-PNAELRSEATYFGPSYMIDWLESDA 57 usage_00245.pdb 1 VYFKNVFEGHVASQFMRGQAREDTR-----------MIGSRSDASYFGPSFMIDDLVYEY 49 YFKNVFEGH A Qy h gR Dv a l SeA YFGPS MI wL usage_00226.pdb 57 GNYKSESILINCHYPVTQNSFVLQWGVIV----- 85 usage_00240.pdb 50 GNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG 83 usage_00242.pdb 58 NGQTIETILINCHYPVSNNEFVLQYGAIVKK--- 88 usage_00243.pdb 55 NGQTIETILINCHYPVSNNEFVLQYGAIV----- 83 usage_00244.pdb 58 NGQTIETILINCHYPVSNNEFVLQYGAIVKKLPG 91 usage_00245.pdb 50 EGYDVESVLINCHYPVSQDKFVLMYGMIV----- 78 E iLINCHYPV n FVLq G IV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################