################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:33 2021 # Report_file: c_0700_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00079.pdb # 2: usage_00141.pdb # 3: usage_00556.pdb # 4: usage_00557.pdb # 5: usage_00748.pdb # # Length: 56 # Identity: 11/ 56 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 56 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 56 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK-K 55 usage_00141.pdb 1 -----R-IFQVNAPINCVCLHPNQAELIVGDQSGAIHIWDLK----TDHNEQLIPE 46 usage_00556.pdb 1 ----QR-IFQVNAPINCVCLHPNQAELIVGDQSGAIHIWDLK----TDHNEQLI-- 45 usage_00557.pdb 1 ----QR-IFQVNAPINCVCLHPNQAELIVGDQSGAIHIWDLK----TDHNEQLI-- 45 usage_00748.pdb 1 ----QR-IFQVNAPINCVCLHPNQAELIVGDQSGAIHIWDLK----TDHNEQLIPE 47 r IfqvNapinCVclhPNqaeliVGdqSgaIhIwdlk tdhneqli #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################