################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:41 2021 # Report_file: c_0206_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00024.pdb # 2: usage_00028.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # # Length: 128 # Identity: 14/128 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/128 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/128 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -KEVEQDPGPLSVPEGAIVSLNCTYS--N---SAFQYFMWYRQYSRKGPELLMYTY---S 51 usage_00028.pdb 1 --------KSVTRPTRSSAEITCDLT--V---INAFYIHWYLHQEGKAPQRLLYYDVSNS 47 usage_00042.pdb 1 ---LT-QPPSASGSLGQSVTISCTGTSSD--VGGYNYVSWYQQHAGKAPKVIIYE----V 50 usage_00043.pdb 1 PSALT-QPPSASGSLGQSVTISCTGT--SSDVGGYNYVSWYQQHAGKAPKVIIYE----V 53 usage_00048.pdb 1 ---LT-QPPSVSVSPGQTATITCSGD--K--V-ASKNVCWYQVKPGQSPEVVMYE----N 47 usage_00049.pdb 1 ---LT-QPPSVSVSPGQTATITCSGD--K--V-ASKNVCWYQVKPGQSPEVVMYE----N 47 s s g i C WY g P Y usage_00024.pdb 52 -SGNKED--GRFTAQV-DKSSKYISLFIRDSQPSDSATYLCAMRGDSS-YKLIFGSGTRL 106 usage_00028.pdb 48 KDVLESGLSPGKYYTHTPR-RWSWILILRNLIENDSGVYYCATWD---RYKKLFGSGTTL 103 usage_00042.pdb 51 -NKRPSGVPDRFSGSK-S--GNTASLTVSGLQAEDEADYYCSSYEGS--DNFVFGTGTKV 104 usage_00043.pdb 54 -NKRPSGVPDRFSGSK-S--GNTASLTVSGLQAEDEADYYCSSYEGS--DNFVFGTGTKV 107 usage_00048.pdb 48 -YKRPSGIPDRFSGSK-S--GSTATLTIRGTQATDEADYYCQVWDSF--STFVFGSGTQV 101 usage_00049.pdb 48 -YKRPSGIPDRFSGSK-S--GSTATLTIRGTQATDEADYYCQVWDSF--STFVFGSGTQV 101 sg rf L q D a YyC FG GT usage_00024.pdb 107 LVRPDIQN 114 usage_00028.pdb 104 VVT----- 106 usage_00042.pdb 105 TV------ 106 usage_00043.pdb 108 TVLG---- 111 usage_00048.pdb 102 TV------ 103 usage_00049.pdb 102 TV------ 103 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################