################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:38 2021 # Report_file: c_0962_116.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00781.pdb # 2: usage_01039.pdb # 3: usage_01154.pdb # # Length: 39 # Identity: 3/ 39 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 39 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 39 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00781.pdb 1 -GTVLLRVGKSN-YRRD-DG-VHVTTIRDHILE------ 29 usage_01039.pdb 1 GHTRYSITA--GEYRS-GN-AQQEKPRFFQST-LLHG-- 32 usage_01154.pdb 1 GHTRYSITA--GEYRS-GN-AQQEKPRFFQST-LLHGLP 34 hTrysita g YRs n qqekprffqst #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################