################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:25 2021 # Report_file: c_1006_90.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00028.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00585.pdb # # Length: 73 # Identity: 5/ 73 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 73 ( 17.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 73 ( 26.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --IFIYEEE---KWPENI-SLLNENILSCLKEAVTNVVKHSQ-A-----KTCRVDIQQL- 47 usage_00072.pdb 1 --EFIRNLP-DRDLYVEIDQDKIT---QVLDNIISNALKYSPE-----GGHVTFSIDVNE 49 usage_00073.pdb 1 -EIIRDYPD--KSVWIEIDTDKMT---QVIDNILNNAIKYSPD-----GGKVTITMQTT- 48 usage_00585.pdb 1 NVNVLFESNVPCPVEAYIDPTRIR---QVLLNLLNNGVKYSK--KDAPDKYVKVILDEK- 54 I qvl n N KyS v usage_00028.pdb 48 WK-EVVITVSDD- 58 usage_00072.pdb 50 EEELLYISVKDE- 61 usage_00073.pdb 49 DT-QLILSISDQG 60 usage_00585.pdb 55 DG-GVLIIVEDN- 65 i v D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################