################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:26 2021 # Report_file: c_1489_80.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_01154.pdb # 2: usage_01432.pdb # 3: usage_01433.pdb # 4: usage_01434.pdb # 5: usage_01435.pdb # 6: usage_01436.pdb # 7: usage_02187.pdb # 8: usage_03032.pdb # 9: usage_04190.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 48 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 48 ( 56.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01154.pdb 1 ----SMNVDLTSAAQNLRERALQRLM----------------TSVTNR 28 usage_01432.pdb 1 -PER------EAHLRLRNLNALRQAA-RH-EE-NERAFFERLGTISDR 38 usage_01433.pdb 1 ----------EAHLRLRNLNALRQAA-RH-EE-NERAFFERLGTISDR 35 usage_01434.pdb 1 ---R------EAHLRLRNLNALRQAA-RH-EE-NERAFFERLGTISD- 35 usage_01435.pdb 1 ---R------EAHLRLRNLNALRQAA-RH-EE-NERAFFERLGTISDR 36 usage_01436.pdb 1 -PER------EAHLRLRNLNALRQAAMRH-EE-NERAFFERLGTISDR 39 usage_02187.pdb 1 EPDR------EAHLRGRNLNALRQAA-RH-ED-NERTFFERLGISDR- 38 usage_03032.pdb 1 ----------EEELVRRILRRAELEG---RSDDNEETVRRRLEVYREK 35 usage_04190.pdb 1 EPER------EAHLRLRNLNALRQAAMRH-EE-NERAFFERLGTISDR 40 e l r l al #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################