################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:12 2021 # Report_file: c_0888_48.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00007.pdb # 2: usage_00243.pdb # 3: usage_00260.pdb # 4: usage_00790.pdb # 5: usage_00791.pdb # # Length: 130 # Identity: 1/130 ( 0.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/130 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/130 ( 50.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 YYTFMKPYM---EQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFP--- 54 usage_00243.pdb 1 ---------ESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY-----------Y-- 38 usage_00260.pdb 1 ------------------ITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ 41 usage_00790.pdb 1 ---------------LFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ 44 usage_00791.pdb 1 ---------------LFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAA-EQ 44 tieamks d Va efws c ee usage_00007.pdb 55 --QSPLQSYNFAL-S-SIKDVVPNLLNLLTRQNEDPEDDDW--NVSMSAGACLQLFAQN- 107 usage_00243.pdb 39 --QYM--------ETYMGPALFAITIEAMKSD---------IDEVALQGIEFWSNVCDEE 79 usage_00260.pdb 42 GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLSTC- 96 usage_00790.pdb 45 GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLATC- 99 usage_00791.pdb 45 GRPPEHTSKFYAK-G-ALQYLVPILTQTLTKQDENDDDDDW--NPCKAAGVCLMLLATC- 99 lvpil lt q n ag cl l usage_00007.pdb ---------- usage_00243.pdb 80 MDLAIEASEA 89 usage_00260.pdb ---------- usage_00790.pdb ---------- usage_00791.pdb ---------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################