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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:04:52 2021
# Report_file: c_0305_18.html
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#====================================
# Aligned_structures: 4
#   1: usage_00042.pdb
#   2: usage_00048.pdb
#   3: usage_00063.pdb
#   4: usage_00141.pdb
#
# Length:        148
# Identity:       33/148 ( 22.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     46/148 ( 31.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           26/148 ( 17.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00042.pdb         1  -MDIRPARISDLTGMQNCNLHNLPENYQLKYYLYHAISWPMLSYVATDP---------KG   50
usage_00048.pdb         1  DFTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVD----------N   50
usage_00063.pdb         1  DFTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVD----------N   50
usage_00141.pdb         1  PINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDPTYLAPGE   60
                               R Ar  Di      N   LPENY       H      a fVA              

usage_00042.pdb        51  RVVGYVLAKMEEEPK---------D-GIPHGHITSVSVMRSYRHLGLAKRLMVQSQRAMV  100
usage_00048.pdb        51  SVVGYIMPRIE-W--GFSNIKQLPS-LVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMK  106
usage_00063.pdb        51  SVVGYIMPRIE-W--GFSNIKQLPS-LVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMK  106
usage_00141.pdb        61  KLVGYVLVKMNDDQ-----------NEPPNGHITSLSVMRTYRRMGIAENLMRQALFALR  109
                            vVGY     e                   GH  S  V   YRr GiA  L   s   m 

usage_00042.pdb       101  EVYGAKYMSLHVRKSNRAAIHLYRDTLQ  128
usage_00048.pdb       107  NDYNAEEIYLEVRVSNYPAIALYEKLN-  133
usage_00063.pdb       107  NDYNAEEIYLEVRVSNYPAIALYEKLN-  133
usage_00141.pdb       110  EVHQAEYVSLHVRQSNRAALHLYRDTLA  137
                             y Ae   L VR SN  Ai LY     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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