################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:26 2021 # Report_file: c_0759_2.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00077.pdb # 10: usage_00078.pdb # 11: usage_00183.pdb # 12: usage_00184.pdb # 13: usage_00194.pdb # 14: usage_00206.pdb # 15: usage_00207.pdb # 16: usage_00208.pdb # 17: usage_00209.pdb # # Length: 86 # Identity: 39/ 86 ( 45.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 86 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 86 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00002.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00003.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00061.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00062.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00063.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00064.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00065.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00077.pdb 1 ESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNG-----FDQYAPP 55 usage_00078.pdb 1 ESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNG-----FDQYAPP 55 usage_00183.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00184.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00194.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00206.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00207.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00208.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 usage_00209.pdb 1 QKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIV 60 KN TFNE F GHFP P PGVLI EGMAQ G usage_00001.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00002.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00003.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00061.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00062.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00063.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00064.pdb 61 AFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00065.pdb 61 AFMTIDKVKFRIPVTPGDRLEYHLE- 85 usage_00077.pdb 56 YLMSIDKARFRKPVFPGDRLEYHVNK 81 usage_00078.pdb 56 YLMSIDKARFRKPVFPGDRLEYHVNK 81 usage_00183.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00184.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00194.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00206.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00207.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00208.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 usage_00209.pdb 61 YFMTIDKVKFRIPVTPGDRLEYHLEV 86 M IDK FR PV PGDRLEYH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################