################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:26 2021 # Report_file: c_0682_38.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00128.pdb # 2: usage_00129.pdb # 3: usage_00273.pdb # 4: usage_00277.pdb # # Length: 67 # Identity: 14/ 67 ( 20.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 67 ( 35.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 67 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00128.pdb 1 -----------TKSSFLEPNFFNKNADN-RLEGGFYGENAEELAGKFLTNDN--SVFAVF 46 usage_00129.pdb 1 -----------TKSSFLEPNFFNKNADN-RLEGGFYGENAEELAGKFLTNDN--SVFAVF 46 usage_00273.pdb 1 GFALDSSQHG------------NAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVF 48 usage_00277.pdb 1 ----------KDKGKGASYNFFSVDSQ--SLEGGFYGPKAEEMAGKFVADDK--SLFAVF 46 n leGGFYG AeElaGkF d SvfAVF usage_00128.pdb 47 AGKQ--- 50 usage_00129.pdb 47 AGKQ--- 50 usage_00273.pdb 49 GAKRQIE 55 usage_00277.pdb 47 SAKHNAS 53 K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################