################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:21:24 2021 # Report_file: c_0293_6.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00050.pdb # 2: usage_00112.pdb # 3: usage_00113.pdb # 4: usage_00116.pdb # 5: usage_00181.pdb # 6: usage_00204.pdb # 7: usage_00247.pdb # 8: usage_00248.pdb # 9: usage_00261.pdb # 10: usage_00278.pdb # 11: usage_00341.pdb # 12: usage_00354.pdb # 13: usage_00360.pdb # 14: usage_00439.pdb # 15: usage_00469.pdb # # Length: 168 # Identity: 14/168 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/168 ( 13.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/168 ( 35.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTLKEDTM--EVEEFLKEAAVMK 37 usage_00112.pdb 1 --GEVYEGVWK-KY-----------------SLTVAVKTLKEDTM--EVEEFLKEAAVMK 38 usage_00113.pdb 1 ------EGVWK-KY-----------------SLTVAVKTLKEDTM--EVEEFLKEAAVMK 34 usage_00116.pdb 1 ------SGTLM-DK-----------------KIKVILKVLDPSHR-DISLAFFEAASMMR 35 usage_00181.pdb 1 --GEVHLCEVD-SPQDLVSLDFPLNVRKG-HPLLVAVKILRPDATKNARNDFLKEVKIMS 56 usage_00204.pdb 1 -------ARAP-GLL------------PYEPFTMVAVKMLKEEASADMQADFQREAALMA 40 usage_00247.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTL--------VEEFLKEAAVMK 31 usage_00248.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTL--------VEEFLKEAAVMK 31 usage_00261.pdb 1 --GEVHLCEVD-SPQD--------------HPLLVAVKILRPDATKNARNDFLKEVKIMS 43 usage_00278.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTLK------EVEEFLKEAAVMK 33 usage_00341.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTLK------EVEEFLKEAAVMK 33 usage_00354.pdb 1 LG-------YW-LN-----------------KDKVAIKTIKEGS--MSEDDFIEEAEVMM 33 usage_00360.pdb 1 ------EGVWK-KY-----------------SLTVAVKTLKEDTM--EVEEFLKEAAVMK 34 usage_00439.pdb 1 ---EVYEGVWK-KY-----------------SLTVAVKTLK---M--EVEEFLKEAAVMK 34 usage_00469.pdb 1 -----------QLH-----------------ETEVLLKVLDKAHR-NYSESFFEAASMMS 31 V K l F M usage_00050.pdb 38 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVSAVVLLY 88 usage_00112.pdb 39 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVNAVVLLY 89 usage_00113.pdb 35 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVNAVVLLY 85 usage_00116.pdb 36 QVSHKHIVYLYGVCVRDVENIMVEEFVEGGPLDLFMHRKSD----------VLTTPWKFK 85 usage_00181.pdb 57 RLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAH-Q-LEDKQ--GPTISYPMLLH 112 usage_00204.pdb 41 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM-SP-P-------PLSCAEQLC 91 usage_00247.pdb 32 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVSAVVLLY 82 usage_00248.pdb 32 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVSAVVLLY 82 usage_00261.pdb 44 RLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAH-Q-LEDK-AAGPTISYPMLLH 100 usage_00278.pdb 34 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVNAVVLLY 84 usage_00341.pdb 34 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVNAVVLLY 84 usage_00354.pdb 34 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFAAETLLG 83 usage_00360.pdb 35 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVNAVVLLY 85 usage_00439.pdb 35 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-N-RQ-------EVSAVVLLY 85 usage_00469.pdb 32 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN----------CINILWKLE 81 l GVC G L l l usage_00050.pdb 89 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 125 usage_00112.pdb 90 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 126 usage_00113.pdb 86 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 122 usage_00116.pdb 86 VAKQLASALSYLEDKDLVHGNVCTKNLLLAREGIDSECG-PFIK-LSD 131 usage_00181.pdb 113 VAAQIASGMRYLATLNFVHRDLATRNCLVGEN--------FTIKI--- 149 usage_00204.pdb 92 IARQVAAGMAYLSERKFVHRDLATRNCLVGEN--------MVVKI--- 128 usage_00247.pdb 83 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 119 usage_00248.pdb 83 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 119 usage_00261.pdb 101 VAAQIASGMRYLATLNFVHRDLATRNCLVGEN--------FTIKI--- 137 usage_00278.pdb 85 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 121 usage_00341.pdb 85 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 121 usage_00354.pdb 84 MCLDVCEGMAYLEEACVIHRDLAARNCLVGEN--------QVIKV--- 120 usage_00360.pdb 86 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 122 usage_00439.pdb 86 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN--------HLVKV--- 122 usage_00469.pdb 82 VAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK--L- 126 a q m yL H N L K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################