################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:09:28 2021 # Report_file: c_0121_1.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00036.pdb # 2: usage_00128.pdb # 3: usage_00130.pdb # 4: usage_00131.pdb # 5: usage_00136.pdb # 6: usage_00137.pdb # 7: usage_00154.pdb # 8: usage_00207.pdb # 9: usage_00208.pdb # 10: usage_00209.pdb # 11: usage_00222.pdb # 12: usage_00223.pdb # 13: usage_00306.pdb # 14: usage_00327.pdb # 15: usage_00331.pdb # 16: usage_00354.pdb # 17: usage_00403.pdb # 18: usage_00488.pdb # 19: usage_00544.pdb # # Length: 132 # Identity: 45/132 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/132 ( 37.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/132 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -VTLKESGPGILKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDDRS 59 usage_00128.pdb 1 --QLQESGPGILQPSQTLSLTCSFSGFSLSTYGMGVSWIRQPSGKGLEWLAHIFWDGDKR 58 usage_00130.pdb 1 -VQLKESGPGILQPSQTLSLTCSFSGFSLSTYGMGVSWIRQPSGKGLEWLAHIFWDGDKR 59 usage_00131.pdb 1 -VQLKESGPGILQPSQTLSLTCSFSGFSLSTYGMGVSWIRQPSGKGLEWLAHIFWDGDKR 59 usage_00136.pdb 1 --TLEESGPGILQPSQTLSLTCSFSGFSLSSSAMSVGWIRQPSGKGLEWLAHIWWNDDKY 58 usage_00137.pdb 1 -ITLEESGPGILQPSQTLSLTCSFSGFSLSSSAMSVGWIRQPSGKGLEWLAHIWWNDDKY 59 usage_00154.pdb 1 -ITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKR 59 usage_00207.pdb 1 -VTLKESGPGILKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDDKS 59 usage_00208.pdb 1 -VTLKESGPGILKPSQTLSLTCSLSGFSLRTSGMGVGWIRQPSGKGLEWLAHIWWDDDKN 59 usage_00209.pdb 1 QVTLKESGPGILKPSQTLSLTCSLSGFSLRTSGMGVGWIRQPSGKGLEWLAHIWWDDDKN 60 usage_00222.pdb 1 --KLQESGPGILKPSQTLSLTCSFSGFSLTTYGMGVGWIRQSSGKGLEWLAHIWWDDDKY 58 usage_00223.pdb 1 -VTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKR 59 usage_00306.pdb 1 -ITLKESGPGIVQPSQPFRLTCTFSGFSLSTSGIGVTWIRQPSGKGLEWLATIWWDDDNR 59 usage_00327.pdb 1 -VTLKESGPVLVKPTETLTLTCTVSGFSLSTYGMGVGWIRQPPGKALEWLAHIWWDDVKR 59 usage_00331.pdb 1 -VTLKESGPVLVKPTETLTLTCTVSGFSLSTYGVGVGWIRQPPGKALEWLAHIWWDDVKR 59 usage_00354.pdb 1 RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKR 60 usage_00403.pdb 1 RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKR 60 usage_00488.pdb 1 -VTLKESGPGILKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDDRS 59 usage_00544.pdb 1 -VTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKR 59 L ESGP P tl LTC SGFSL V WIRQp GK LEWLA I usage_00036.pdb 60 YNPSLKSQLTISKDAARNQVFLRITSVDTADTATYYCVRRAHT-T---------VLGDWF 109 usage_00128.pdb 59 YNPSLKSRLKISKDTSNNQVFLKITSVDTADTATYYCVQE------------------GY 100 usage_00130.pdb 60 YNPSLKSRLKISKDTSNNQVFLKITSVDTADTATYYCVQE------------------GY 101 usage_00131.pdb 60 YNPSLKSRLKISKDTSNNQVFLKITSVDTADTATYYCVQE------------------GY 101 usage_00136.pdb 59 YNPALKSRLTVSKDSSDNQVFLKIASVVTADTATYYCARIPG--F-------------GF 103 usage_00137.pdb 60 YNPALKSRLTVSKDSSDNQVFLKIASVVTADTATYYCARIPG--F-------------GF 104 usage_00154.pdb 60 YSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGP-VNAM 118 usage_00207.pdb 60 YNPSLKSQLTISKDAARNQVFLRITSVDTADTATYYCVRRAHT-T---------VLGDWF 109 usage_00208.pdb 60 YNPSLKSQLTISKDTSRNQVFLKITSVDTADTATYYCVRRAHN-V---------L-GDWF 108 usage_00209.pdb 61 YNPSLKSQLTISKDTSRNQVFLKITSVDTADTATYYCVRRAHN-V---------L-GDWF 109 usage_00222.pdb 59 YNPSLKSRLTISKDTSRNQVFLKITSVATADTATYYCARRAPF-Y---------G-NHAM 107 usage_00223.pdb 60 YNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCTLYYG--S---------V----- 103 usage_00306.pdb 60 YNPSLKSRLTVSKDTSNNQAFLNMMTVETADTAIYYCAQSAIT-S---------VTDSAM 109 usage_00327.pdb 60 YNPALKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARMGSD-----------Y-DVWF 107 usage_00331.pdb 60 YNPALKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARLGSD-----------Y-DVWF 107 usage_00354.pdb 61 YSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPI-----VNAM 115 usage_00403.pdb 61 YSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGP-T---------GPVNAM 110 usage_00488.pdb 60 YNPSLKSQLTISKDTSRNQVFLRITSVDTADTATYYCVRRAHT-T---------VLGDWF 109 usage_00544.pdb 60 YNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARLYG--F---------T--YGF 106 Y P L L KD Qv L DTAtY C usage_00036.pdb 110 AYWGQGTLVTVS 121 usage_00128.pdb 101 IYWGQGTSVTVS 112 usage_00130.pdb 102 IYWGQGTSVTV- 112 usage_00131.pdb 102 IYWGQGTSVTVS 113 usage_00136.pdb 104 DYWGQGTTLTV- 114 usage_00137.pdb 105 DYWGQGTTLTV- 115 usage_00154.pdb 119 DVWGQGITVTIS 130 usage_00207.pdb 110 AYWGQGTLVTVS 121 usage_00208.pdb 109 AYWGQGTLVTVS 120 usage_00209.pdb 110 AYWGQGTLVTVS 121 usage_00222.pdb 108 DYWGQGTTVTVS 119 usage_00223.pdb 104 DYWGQGTSVTVS 115 usage_00306.pdb 110 DHWGQGTSVTV- 120 usage_00327.pdb 108 DYWGQGTLVTVS 119 usage_00331.pdb 108 DYWGQGTLVTVS 119 usage_00354.pdb 116 DVWGQGITVTIS 127 usage_00403.pdb 111 DVWGQGITVTI- 121 usage_00488.pdb 110 AYWGQGTLVTVS 121 usage_00544.pdb 107 AYWGQGTLVTVS 118 WGQG T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################