################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:24 2021 # Report_file: c_0679_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00163.pdb # 2: usage_00164.pdb # 3: usage_00165.pdb # 4: usage_00166.pdb # 5: usage_00168.pdb # 6: usage_00169.pdb # 7: usage_00420.pdb # 8: usage_00462.pdb # 9: usage_00518.pdb # # Length: 77 # Identity: 5/ 77 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 77 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 77 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00164.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00165.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00166.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00168.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00169.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00420.pdb 1 EMTVPYGDPRAPFHRKQAFDLGDCGFGATGNSLA----LGCDCLGVIKYMDCRRVNTNGD 56 usage_00462.pdb 1 -AVALYGGHTPAGMQTKYLDVGWGL-GSVTHELAPGID----CPETATFLDTFHYYDADD 54 usage_00518.pdb 1 -ALAHYAANDPVQSSVAYLDSYYGF-GPYAFELLKGYD----CPSYASYLNTSFYKDE-E 53 a a Yg p ylD g g G eLa Cp a ldt y d d usage_00163.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00164.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00165.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00166.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00168.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00169.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00420.pdb 57 SVLIPNTVCLHEQD-GG 72 usage_00462.pdb 55 PVHYPRALCLFEMP-TG 70 usage_00518.pdb 54 THTHVD-SLCLFEFDA- 68 v p cl e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################