################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:40 2021 # Report_file: c_0527_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00033.pdb # 4: usage_00038.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # # Length: 112 # Identity: 29/112 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/112 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/112 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 AGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 59 usage_00032.pdb 1 -----------LTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 48 usage_00033.pdb 1 -----------LTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 48 usage_00038.pdb 1 AGILAQAGLFALQQHVVRLADDHRRARQLAEGLAALPGIRLDLAQVQTNMVFLQLT---- 56 usage_00043.pdb 1 -----------LTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 48 usage_00044.pdb 1 AGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 59 usage_00060.pdb 1 -----------LT-KVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTN-VILRTDNLKV 46 usage_00061.pdb 1 -----------LT-KVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTN-VILRTDNLKV 46 usage_00062.pdb 1 AGVLAAAGIIALT-KVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTN-VILRTDNLKV 57 usage_00063.pdb 1 -----------LT-KVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTN-VILRTDNLKV 46 usage_00064.pdb 1 AGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKV 59 Lt VdRLkeDHenARfLAlkLkeig ysvnpedVkTN ViLrtd usage_00031.pdb 60 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 111 usage_00032.pdb 49 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 100 usage_00033.pdb 49 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 100 usage_00038.pdb 57 ERAPLLAFMKARGILFS--G--ELRLVTHLQIHDDDIEEVIDAFTEYL---- 100 usage_00043.pdb 49 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 100 usage_00044.pdb 60 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKL----- 106 usage_00060.pdb 47 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKL----- 93 usage_00061.pdb 47 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 98 usage_00062.pdb 58 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS 109 usage_00063.pdb 47 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKF- 97 usage_00064.pdb 60 NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKL----- 106 nahgfiealrnsGvLan s EiRLVTHkdvsrnDIEEalniFekl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################