################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:50 2021 # Report_file: c_1399_222.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00307.pdb # 2: usage_00540.pdb # 3: usage_00896.pdb # 4: usage_01156.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 68 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 68 ( 64.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00307.pdb 1 ------SQE---KVQA-EDLVKSLRGGRLTEACIRPV--ESSL---VSVLAH--PPYTQS 43 usage_00540.pdb 1 ---SPEEMY---IQQKVRVLLMLRKMG-S--------NLTASE---EEFLRTYAGVVNSQ 42 usage_00896.pdb 1 ---SPEEMY---IQQKVRVLLMLRKMG-S--------NLTASE---EEFLRTYAGVVSSQ 42 usage_01156.pdb 1 IVDEVAYHEKYPTIYHLRKKLVDS--T----------------DKADLR---LIYLALAH 39 q r ll g usage_00307.pdb -------- usage_00540.pdb 43 LS------ 44 usage_00896.pdb 43 LSQLP--- 47 usage_01156.pdb 40 MI---KFR 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################