################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:25 2021 # Report_file: c_0609_20.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00060.pdb # 2: usage_00079.pdb # 3: usage_00172.pdb # 4: usage_00276.pdb # 5: usage_00463.pdb # 6: usage_00577.pdb # 7: usage_00578.pdb # 8: usage_00579.pdb # 9: usage_00580.pdb # 10: usage_00798.pdb # # Length: 108 # Identity: 4/108 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/108 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/108 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 ---DPVLSELLDAEAAHAKDARQRQQFVA-TT-SAP--NLKTEISYGIPKHTIEDYAKQH 53 usage_00079.pdb 1 TY------DALDVEKQKLSQIG---NTLG-----IDPA--HRWLVWGEPREEIIRIAEQE 44 usage_00172.pdb 1 ------KEKLKEEASRKLQEKA---EEVK-RAFRAK--NVRTIIRFGIPWDEIVKVAEEE 48 usage_00276.pdb 1 --AYDEIEMKEEEKAKLLTQKF---STFFTEK-GI---NPFVVIKEGEPVEMVLEEAKD- 50 usage_00463.pdb 1 -----------------MENIK---KELE-DV-GF---KVKDIIVVGIPHEEIVKIAEDE 35 usage_00577.pdb 1 -----AMDDLKAEAKSQLEAII---KKFN-----LPADRVQAHVAEGSPKDKILEMAKKL 47 usage_00578.pdb 1 -----AMDDLKAEAKSQLEAII---KKFN-----LPADRVQAHVAEGSPKDKILEMAKKL 47 usage_00579.pdb 1 -----AMDDLKAEAKSQLEAII---KKFN-----LPADRVQAHVAEGSPKDKILEMAKKL 47 usage_00580.pdb 1 ------MDDLKAEAKSQLEAII---KKFN-----LPADRVQAHVAEGSPKDKILEMAKKL 46 usage_00798.pdb 1 -------DALKDYATEIAVQAK---TRAT-EL-GVPADKVRAFVKGGRPSRTIVRFARKR 48 G P i A usage_00060.pdb 54 PEIDLIVLGATGTN------SPHRV-AVGSTTSYVVDHAPCNVIVIR- 93 usage_00079.pdb 45 N-VDLIVVGSH------------------STANSVLHYAKCDVLAVR- 72 usage_00172.pdb 49 N-VSLIILPSRGK----H-E------FLGSTVMRVLRKTKKPVLIIKE 84 usage_00276.pdb 51 --YNLLIIGSSE-N-SFLNKIF-AS-HQ----DDFIQKAPIPVLIVK- 87 usage_00463.pdb 36 G-VDIIIMGSHGKTN-----LK-EI-LLGSVTENVIKKSNKPVLVVK- 74 usage_00577.pdb 48 P-ADMVIIASHRPD------IT-TY-LLGSNAAAVVRHAECSVLVVR- 85 usage_00578.pdb 48 P-ADMVIIASHRPD------IT-TY-LLGSNAAAVVRHAECSVLVVR- 85 usage_00579.pdb 48 P-ADMVIIASHRPD------IT-TY-LLGSNAAAVVDHAECSVLVVR- 85 usage_00580.pdb 47 P-ADMVIIASHRPD------IT-TY-LLGSNAAAVVDHAECSVLVVR- 84 usage_00798.pdb 49 E-CDLVVIGAQGTN------GD-KSLLLGSVAQRVAGSAHCPVLVV-- 86 v Vl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################