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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:40:28 2021
# Report_file: c_1396_18.html
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#====================================
# Aligned_structures: 11
#   1: usage_00081.pdb
#   2: usage_00522.pdb
#   3: usage_00566.pdb
#   4: usage_00569.pdb
#   5: usage_00618.pdb
#   6: usage_00622.pdb
#   7: usage_00862.pdb
#   8: usage_00906.pdb
#   9: usage_01004.pdb
#  10: usage_01007.pdb
#  11: usage_01037.pdb
#
# Length:        124
# Identity:        8/124 (  6.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      9/124 (  7.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           71/124 ( 57.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00081.pdb         1  -------------------IPLIVIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   39
usage_00522.pdb         1  -------------------IPLIVIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   39
usage_00566.pdb         1  -----NESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   53
usage_00569.pdb         1  -----NESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   53
usage_00618.pdb         1  -------------------IPLIVIFFCYGQL-------------------QKAEKEVTR   22
usage_00622.pdb         1  -------------------------------LVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   27
usage_00862.pdb         1  PTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVR-MLSG--SKEKDRNLRRITR   57
usage_00906.pdb         1  -------------------IPLIVIFFCYGQLVFTVKEAAA-------ATTQKAEKEVTR   34
usage_01004.pdb         1  -----NESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   53
usage_01007.pdb         1  PQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRG--VR-LLSGSREKDRNLRRITR   57
usage_01037.pdb         1  ------ESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ-QQ-ESATTQKAEKEVTR   52
                                                                                     TR

usage_00081.pdb        40  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSAV------   87
usage_00522.pdb        40  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSAV------   87
usage_00566.pdb        54  MVIIYVIAFLICWVPYASVAFYIFTHQGSCF------GPIFMTIPAFFAKSAAI------  101
usage_00569.pdb        54  MVIIYVIAFLICWVPYASVAFYIFTHQGSCF------GPIFMTIPAFFAKSAAI------  101
usage_00618.pdb        23  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSA-------   69
usage_00622.pdb        28  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSAV------   75
usage_00862.pdb        58  MVLVVVAVFIVCWTPIHIYVIIKALIT----IPETTFQTVSWHFCIALGYTNSCLN----  109
usage_00906.pdb        35  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSAV------   82
usage_01004.pdb        54  MVIIYVIAFLICWVPYASVAFYIFTHQGSCF------GPIFMTIPAFFAKSAAI------  101
usage_01007.pdb        58  LVLVVVAVFVGCWTPVQVFVLAQGLGV----QPSSETAVAILRFCTALGYVNSCLNPILY  113
usage_01037.pdb        53  MVIIMVIAFLICWLPYAGVAFYIFTHQGSDF------GPIFMTIPAFFAKTSAVYNPVI-  105
                           mV   V  F  CW P                                             

usage_00081.pdb            ----     
usage_00522.pdb            ----     
usage_00566.pdb            ----     
usage_00569.pdb            ----     
usage_00618.pdb            ----     
usage_00622.pdb            ----     
usage_00862.pdb            ----     
usage_00906.pdb            ----     
usage_01004.pdb            ----     
usage_01007.pdb       114  AFLD  117
usage_01037.pdb            ----     
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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