################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:38 2021 # Report_file: c_0628_5.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00036.pdb # 6: usage_00045.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00067.pdb # 10: usage_00068.pdb # 11: usage_00069.pdb # 12: usage_00070.pdb # 13: usage_00072.pdb # 14: usage_00077.pdb # 15: usage_00080.pdb # 16: usage_00081.pdb # 17: usage_00082.pdb # 18: usage_00089.pdb # 19: usage_00098.pdb # 20: usage_00099.pdb # # Length: 105 # Identity: 30/105 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/105 ( 43.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/105 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -LLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKV--TGCD 57 usage_00013.pdb 1 -LLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKV--TGCD 57 usage_00014.pdb 1 -LLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKV--TGCD 57 usage_00015.pdb 1 -LLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKV--TGCD 57 usage_00036.pdb 1 SLVQFETLIMKIAGRSGLLWYSAYGCYCGWGGHGLPQDATDRCCFVHDCCYGKA--TDCN 58 usage_00045.pdb 1 NLFQFAKMINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRV--RGCN 58 usage_00064.pdb 1 -LFQFARLIDAKQEAFSFFKYISYGCYCGWGGQGTPKDATDRCCFVHDCCYARV--KGCN 57 usage_00065.pdb 1 -LFQFARLIDAKQEAFSFFKYISYGCYCGWGGQGTPKDATDRCCFVHDCCYARV--KGCN 57 usage_00067.pdb 1 SLIQFETLIMKVVKKSGMFWYSAYGCYCGWGGHGRPQDATDRCCFVHDCCYGKV--TGCD 58 usage_00068.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCN 58 usage_00069.pdb 1 NLFQFEKLIKKMTGKSGMLWYSAYGCYCGWGGQGRPKDATDRCCFVHDCCYGKV--TGCN 58 usage_00070.pdb 1 -LFQFEKLIKKMTGKSGMLWYSAYGCYCGWGGQGRPKDATDRCCFVHDCCYGKV--TGCN 57 usage_00072.pdb 1 NLFQFAKMINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRV--RGCN 58 usage_00077.pdb 1 GILELAGTVGCVGPR-TPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCS 59 usage_00080.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCD 58 usage_00081.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCN 58 usage_00082.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCN 58 usage_00089.pdb 1 -LMQFELLIMKVAGRSGIVWYSDYGCFCGKGGHGRPQDATDRCCFVHDCCYGKV--NGCD 57 usage_00098.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCD 58 usage_00099.pdb 1 SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKV--TGCD 58 l qf i Y YGC CG GG G P DAtDrCCfvHDCCY gC usage_00012.pdb 58 PKWDDYTYSWKDGDIVCG-GDDPCKKEVCECDKAAAICFRDNLKT 101 usage_00013.pdb 58 PKWDDYTYSWKDGDIVCG-GDDPCKKEVCECDKAAAICFRDN--- 98 usage_00014.pdb 58 PKWDDYTYSWKDGDIVCG-GDDPCKKEVCECDKAAAICFRDN--- 98 usage_00015.pdb 58 PKWDDYTYSWKDGDIVCG-GDDPCKKEVCECDKAAAICFRDN--- 98 usage_00036.pdb 59 PKTVSYTYSEENGEIICG-GDDPCGTQICECDKAAAICFRD---- 98 usage_00045.pdb 59 PKLAIYSYSFKKGNIVCG-KNNGCLRDICECDRVAANCFHQNK-- 100 usage_00064.pdb 58 PKLVEYSYSYRTGKIVCG-GDDPCLRAVCECDRVAAICFREN--- 98 usage_00065.pdb 58 PKLVEYSYSYRTGKIVCG-GDDPCLRAVCECDRVAAICFREN--- 98 usage_00067.pdb 59 PKMDSYTYSEENGDIVCG-GDDPCKREICECDRVAADCFRDN--- 99 usage_00068.pdb 59 PKIDSYTYSKKNGDVVCG-GDNPCKKQICECDRVATTCFRDN--- 99 usage_00069.pdb 59 PKMDIYTYSVDNGNIVCG-GTNPCKKQICECDRAAAICFRDN--- 99 usage_00070.pdb 58 PKMDIYTYSVDNGNIVCG-GTNPCKKQICECDRAAAICFRDN--- 98 usage_00072.pdb 59 PKLAIYSYSFKKGNIVCG-KNNGCLRDICECDRVAANCFHQN--- 99 usage_00077.pdb 60 PKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT--- 101 usage_00080.pdb 59 PKIDSYTYSKKNGDVVCG-GDDPCKKQICECDRVATTCFRDN--- 99 usage_00081.pdb 59 PKIDSYTYSKKNGDVVCG-GDNPCKKQICECDRVATTCFRDNKDT 102 usage_00082.pdb 59 PKIDSYTYSKKNGDVVCG-GDNPCKKQICECDRVATTCFRDN--- 99 usage_00089.pdb 58 PKEDFYRYSSNNGDIVCE-ANNPCTKEICECDKAAAICFRDN--- 98 usage_00098.pdb 59 PKIDSYTYSKKNGDVVCG-GDDPCKKQICECDRVATTCFRDN--- 99 usage_00099.pdb 59 PKIDSYTYSKKNGDVVCG-GDDPCKKQICECDRVATTCFRDN--- 99 PK Y ys g Cg C CeCD a Cf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################