################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:01 2021 # Report_file: c_0175_55.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00088.pdb # 2: usage_00103.pdb # 3: usage_00155.pdb # 4: usage_00205.pdb # 5: usage_00219.pdb # 6: usage_00222.pdb # 7: usage_00340.pdb # 8: usage_00406.pdb # 9: usage_00534.pdb # 10: usage_00535.pdb # 11: usage_00536.pdb # 12: usage_00537.pdb # # Length: 153 # Identity: 10/153 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/153 ( 13.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/153 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 GILLAVMPWNFPFWQVFRFAAPALMAGNVAVLKHASNVPQCALAVEAILEAAGFPEGVFQ 60 usage_00103.pdb 1 GIGAGITPFNFPG-IP-W-FAPAIACGNAFILKPSERDPSVPIRLAEL-IEAGLPAGILN 56 usage_00155.pdb 1 GVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFN 60 usage_00205.pdb 1 GVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFN 60 usage_00219.pdb 1 --VALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLN 58 usage_00222.pdb 1 GVVAGITPFNFPVMVPLWMFPMAIVCGNCFVLKPSERDPSSTLYIAQLLQEAGLPDGVMN 60 usage_00340.pdb 1 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 60 usage_00406.pdb 1 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVA 59 usage_00534.pdb 1 --VAQIVPWNFPLMFTSWKMGPALAAGNTIVIKPSEITPLSTLRIVELMTEVGFPKGVVN 58 usage_00535.pdb 1 --VAQIVPWNFPLMFTSWKMGPALAAGNTIVIKPSEITPLSTLRIVELMTEVGFPKGVVN 58 usage_00536.pdb 1 GVVAQIVPWNFPLMFTSWKMGPALAAGNTIVIKPSEITPLSTLRIVELMTEVGFPKGVVN 60 usage_00537.pdb 1 -VVAQIVPWNFPLMFTSWKMGPALAAGNTIVIKPSEITPLSTLRIVELMTEVGFPKGVVN 59 i p N P A G Kp p g usage_00088.pdb 61 TLLIGA-SQ-VEQVIKDPRVKAATLTGSEPAGASLASLAGQEIKPTLLELGGSDP-FVVF 117 usage_00103.pdb 57 VVNGDK-GA-VDAILTHPDIAAVSFVGSTPIARYVYGTAAN-GKRAQCFGGAKNHI--I- 110 usage_00155.pdb 61 VVTGYG-DPAGQVLAEDPNVD-VAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP-QIVF 117 usage_00205.pdb 61 VVYGAH-DV-VNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNH-TIVL 117 usage_00219.pdb 59 IVTGLGHEA-GASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSP-IVVF 116 usage_00222.pdb 61 VVNGDK-EA-VDALLHDDRVKAVSFVGSTPIAEYIYRTASANGKRCQALGGAKNH-AIVM 117 usage_00340.pdb 61 VINGTGSVV-GQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAP-MVVM 118 usage_00406.pdb 60 VIQGGR-DE-NSHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP-LIVL 115 usage_00534.pdb 59 VVPGYGHTA-GQALAEHLDVGKIAFTGSTATGRRIVEASKSNLKRIQLELGGKGA-NIVF 116 usage_00535.pdb 59 VVPGYGHTA-GQALAEHLDVGKIAFTGSTATGRRIVEASKSNLKRIQLELGGKGA-NIVF 116 usage_00536.pdb 61 VVPGYGHTA-GQALAEHLDVGKIAFTGSTATGRRIVEASKSNLKRIQLELGGKGA-NIVF 118 usage_00537.pdb 60 VVPGYGHTA-GQALAEHLDVGKIAFTGSTATGRRIVEASKSNLKRIQLELGGKGA-NIVF 117 g GS G k v usage_00088.pdb 118 PSADLDEAVEVGTVARTMNNGQSCIAAKRFILH 150 usage_00103.pdb 111 PDADLDQAANALIGAGYGSAGERCAISVA-VPV 142 usage_00155.pdb 118 ADADLDAAADGIAYGVYHNAGQCCISGSRLLVQ 150 usage_00205.pdb 118 NDANLEDTVTNIVGAAFGSAGERCMACAVVTVE 150 usage_00219.pdb 117 EDVDLDKVAEWTVFGCFFTNGQICSATSRLIVH 149 usage_00222.pdb 118 PDADMDNAVNQLLGAAFGSSGERCMALSVAVAV 150 usage_00340.pdb 119 DDADLDKAAEDALWGRFANCGQVCTCVERLYVH 151 usage_00406.pdb 116 PDADLDQTVNQLMFGKFINSGQTCIAPDYLYVH 148 usage_00534.pdb 117 EDANIEAAVNGAAWAIFHNQGQACIAGSRLILH 149 usage_00535.pdb 117 EDANIEAAVNGAAWAIFHNQGQACIAGSRLILH 149 usage_00536.pdb 119 EDANIEAAVNGAAWAIFHNQGQACIAGSRLILH 151 usage_00537.pdb 118 EDANIEAAVNGAAWAIFHNQGQACIAGSRLILH 150 da G C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################