################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:05 2021 # Report_file: c_0833_15.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00082.pdb # 2: usage_00091.pdb # 3: usage_00134.pdb # 4: usage_00233.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00236.pdb # 8: usage_00237.pdb # 9: usage_00244.pdb # 10: usage_00245.pdb # 11: usage_00248.pdb # 12: usage_00249.pdb # 13: usage_00250.pdb # 14: usage_00251.pdb # # Length: 84 # Identity: 14/ 84 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 84 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 84 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 --DSYTKNAKAFKKEAEQLTEEYTQKFKKVR--SKTFVTQHTAFSYLAKRFGLKQLGISG 56 usage_00091.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 59 usage_00134.pdb 1 -KETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWE 59 usage_00233.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSQGAFKYFSKAYGVPSAYIWE 59 usage_00234.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSQGAFKYFSKAYGVPSAYIWE 59 usage_00235.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 59 usage_00236.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 59 usage_00237.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 59 usage_00244.pdb 1 -KADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWE 59 usage_00245.pdb 1 HKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWE 60 usage_00248.pdb 1 --EFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 58 usage_00249.pdb 1 --EFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 58 usage_00250.pdb 1 --EFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 58 usage_00251.pdb 1 NKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWE 60 YeK y l kL k KF i Ts gaFkYfsK yG yIwe usage_00082.pdb 57 ISPEQ-EPSPRQLKEIQDFVKE-- 77 usage_00091.pdb 60 IN-TEEEGTPEQIKTLVEKLRQT- 81 usage_00134.pdb 60 IN-TEEEGTPDQISSLIEKLKVI- 81 usage_00233.pdb 60 IN-TEEEGTPEQIKTLVEKLRQT- 81 usage_00234.pdb 60 IN-TEEEGTPEQIKTLVEKLRQT- 81 usage_00235.pdb 60 IN-TEEEGTPEQIKTLVEKLRQT- 81 usage_00236.pdb 60 IN-TEEEGTPEQIKTLVEKLRQT- 81 usage_00237.pdb 60 IN-TEEEGTPEQIKTLVEKLR--- 79 usage_00244.pdb 60 IN-TEKQGTPEQMRQAIEFVKKH- 81 usage_00245.pdb 61 IN-TEKQGTPEQMRQAIEFVKKHK 83 usage_00248.pdb 59 IN-TEEEGTPEQIKTLVEKLRQT- 80 usage_00249.pdb 59 IN-TEEEGTPEQIKTLVEKLRQT- 80 usage_00250.pdb 59 IN-TEEEGTPEQIKTLVEKLRQT- 80 usage_00251.pdb 61 IN-TEEEGTPEQIKTLVEKLRQT- 82 In te gtP Q e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################