################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:28 2021 # Report_file: c_0717_9.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00139.pdb # 2: usage_00140.pdb # 3: usage_00344.pdb # 4: usage_00345.pdb # 5: usage_00346.pdb # 6: usage_00347.pdb # 7: usage_00348.pdb # 8: usage_00377.pdb # 9: usage_00383.pdb # # Length: 78 # Identity: 4/ 78 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 78 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 78 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 SIYTLGIDVGSTASKCIILKD-----GKEIVAKSLVAVGT-------GT-SGPARSISEV 47 usage_00140.pdb 1 SIYTLGIDVGSTASKCIILKD-----GKEIVAKSLVAVGT-------GT-SGPARSISEV 47 usage_00344.pdb 1 -MYTMGLDIGSTASKGVILKN-----GEDIVASETISSGT-------GT-TGPSRVLEKL 46 usage_00345.pdb 1 -MYTMGLDIGSTASKGVILKN-----GEDIVASETISSGT-------GT-TGPSRVLEKL 46 usage_00346.pdb 1 -MYTMGLDIGSTASKGVILKN-----GEDIVASETISSGT-------GT-TGPSRVLEKL 46 usage_00347.pdb 1 -MYTMGLDIGSTASKGVILKN-----GEDIVASETISSGT-------GT-TGPSRVLEKL 46 usage_00348.pdb 1 -MYTMGLDIGSTASKGVILKN-----GEDIVASETISSGT-------GT-TGPSRVLEKL 46 usage_00377.pdb 1 --KIAAFDIGGTALK-GVVLP-----HGEIILTKSAEISG-------SDGDQILAEK-VF 44 usage_00383.pdb 1 -RYIAGIDIGNSSTEVALATLDEAGA-LTITHSALAETTGIKGTLRN-V-FGIQEALALV 56 y g D G ta k I g usage_00139.pdb 48 LENAHMKKEDMAFTLATG 65 usage_00140.pdb 48 LENAHMKKEDMAFTLAT- 64 usage_00344.pdb 47 YGKTGLAREDIKKVVVT- 63 usage_00345.pdb 47 YGKTGLAREDIKKVVVT- 63 usage_00346.pdb 47 YGKTGLAREDIKKVVVTG 64 usage_00347.pdb 47 YGKTGLAREDIKKVVVT- 63 usage_00348.pdb 47 YGKTGLAREDIKKVVVTG 64 usage_00377.pdb 45 LAE----NTDVTGIAVS- 57 usage_00383.pdb 57 ARGAGIAVSDISLIRIN- 73 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################