################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:54 2021 # Report_file: c_0417_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00093.pdb # 2: usage_00094.pdb # 3: usage_00095.pdb # 4: usage_00112.pdb # 5: usage_00113.pdb # 6: usage_00114.pdb # 7: usage_00115.pdb # 8: usage_00116.pdb # 9: usage_00117.pdb # 10: usage_00118.pdb # 11: usage_00119.pdb # 12: usage_00120.pdb # 13: usage_00121.pdb # # Length: 72 # Identity: 32/ 72 ( 44.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 72 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 72 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 ----------------------LKDLSGDITDRNVLIVEDIIDSGLTLKWLLSNLRSRGP 38 usage_00094.pdb 1 ----------------------LKDLSGDITDRNVLIVEDIIDSGLTLKWLLSNLRSRGP 38 usage_00095.pdb 1 ----------------------LKDLSGDITDRNVLIVEDIIDSGLTLKWLLSNLRSRGP 38 usage_00112.pdb 1 VPTQFEFMAVSSY---GGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 57 usage_00113.pdb 1 ------------------VVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 42 usage_00114.pdb 1 ---QFEFMAVSSY------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 51 usage_00115.pdb 1 -PTQFEFMAVSSYGSS-GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 58 usage_00116.pdb 1 -PTQFEFMAVSS-------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 52 usage_00117.pdb 1 -----EFMAVSS-------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 48 usage_00118.pdb 1 -PTQFEFMAVSS-------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 52 usage_00119.pdb 1 VPTQFEFMAVSSY-----VVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 55 usage_00120.pdb 1 VPTQFEFMAVSSY--S-GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 57 usage_00121.pdb 1 ---QFEFMAVSSYGSS-GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNP 56 LKDL DI R VLIVED DSGLTL WL NL SR P usage_00093.pdb 39 KSVEVAALLRKP 50 usage_00094.pdb 39 KSVEVAALLRKP 50 usage_00095.pdb 39 KSVEVAALLRKP 50 usage_00112.pdb 58 RSLRVCTLLRK- 68 usage_00113.pdb 43 RSLRVCTLLRKP 54 usage_00114.pdb 52 RSLRVCTLLRKP 63 usage_00115.pdb 59 RSLRVCTLLRKP 70 usage_00116.pdb 53 RSLRVCTLLRKP 64 usage_00117.pdb 49 RSLRVCTLLRK- 59 usage_00118.pdb 53 RSLRVCTLLRKP 64 usage_00119.pdb 56 RSLRVCTLLRKP 67 usage_00120.pdb 58 RSLRVCTLLRK- 68 usage_00121.pdb 57 RSLRVCTLLRK- 67 S V LLRK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################