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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:14:45 2021
# Report_file: c_0299_21.html
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#====================================
# Aligned_structures: 5
#   1: usage_00017.pdb
#   2: usage_00018.pdb
#   3: usage_00086.pdb
#   4: usage_00087.pdb
#   5: usage_00308.pdb
#
# Length:        123
# Identity:       63/123 ( 51.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    100/123 ( 81.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/123 ( 17.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  LVVADLPFGTYGTPADAFASAVKLMRAGAQMVKLEGGEWLAETVRFLVERAVPVCAHVG-   59
usage_00018.pdb         1  LVVADLPFGTYGTPADAFASAVKLMRAGAQMVKLEGGEWLAETVRFLVERAVPVCAHVG-   59
usage_00086.pdb         1  LIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVG-   59
usage_00087.pdb         1  LIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGL   60
usage_00308.pdb         1  LLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGL   60
                           L vADLPFgtYgTPadAFasAvklMRAGAqMVK EGGEWLaETVrfLvERAVPVCaHvG 

usage_00017.pdb        60  -------------L-----GAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTRELSIPT  101
usage_00018.pdb        60  -------------A-----GAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTRELSIPT  101
usage_00086.pdb        60  -------------------GAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTRELSIPT  100
usage_00087.pdb        61  TPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTRELSIPT  120
usage_00308.pdb        61  TPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPV  120
                                              gaaQLLrDArAvEeAGAQLiVLEaVPtlvAaevTreLsIPt

usage_00017.pdb       102  IG-  103
usage_00018.pdb       102  IG-  103
usage_00086.pdb       101  IGI  103
usage_00087.pdb       121  IGI  123
usage_00308.pdb       121  IGI  123
                           IG 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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