################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:52 2021 # Report_file: c_0378_99.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00190.pdb # 2: usage_00766.pdb # 3: usage_00767.pdb # # Length: 108 # Identity: 45/108 ( 41.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/108 ( 52.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/108 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00190.pdb 1 PPQIYSPNDRVVYEKEPGEEL-----VIPCKVYFSFIMDSHNEVWWTIDGKKPDDVTVDI 55 usage_00766.pdb 1 ---------------------PPVIHLIPCTVYFSFLMDSRNEVWWTIDG-K-------V 31 usage_00767.pdb 1 PPVIHSPNDHVVYE------------LIPCTVYFSFLMDSRNEVWWTID----------- 37 lIPCtVYFSFlMDSrNEVWWTID usage_00190.pdb 56 TINESVSYSSTEDETRTQILSIKKVTPEDLRRNYVCHARNTKGEAEQ- 102 usage_00766.pdb 32 TINESISHSRTEDETRTQIL-------------YVCHARSAKGEVAKA 66 usage_00767.pdb 38 TINESISHSRTEDETRTQILS-------DLKRSYVCHARSAKGEVAKA 78 TINESiShSrTEDETRTQIL YVCHARsaKGEvak #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################