################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:12 2021 # Report_file: c_1084_101.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00234.pdb # 2: usage_00835.pdb # 3: usage_00836.pdb # 4: usage_00837.pdb # 5: usage_00838.pdb # 6: usage_00879.pdb # 7: usage_00880.pdb # 8: usage_00881.pdb # 9: usage_00882.pdb # 10: usage_00883.pdb # 11: usage_01184.pdb # 12: usage_01384.pdb # 13: usage_01675.pdb # 14: usage_01849.pdb # # Length: 44 # Identity: 12/ 44 ( 27.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 44 ( 81.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 44 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_00835.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCN-- 38 usage_00836.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCN-- 38 usage_00837.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCN-- 38 usage_00838.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCN-- 38 usage_00879.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_00880.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_00881.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_00882.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_00883.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCNIG 40 usage_01184.pdb 1 DFDTVLKEADIISLHTPLLKSTENMIGKKQFAEMKNDAILINA- 43 usage_01384.pdb 1 TMDEACQEGNIFVTTTGC----IDIILGRHFEQMKDDAIVCNIG 40 usage_01675.pdb 1 TMDEACKEGNIFVTTTGC----VDIILGRHFEQMKDDAIVCN-- 38 usage_01849.pdb 1 TMDEACQEGNIFVTTTGC----IDIILGRHFEQMKDDAIVCNIG 40 tmDeac EgnIfvttTgc diIlgrhFeqMKdDAIvcN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################