################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:52 2021 # Report_file: c_1212_43.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00065.pdb # 2: usage_00123.pdb # 3: usage_00201.pdb # 4: usage_00253.pdb # 5: usage_00774.pdb # 6: usage_00849.pdb # 7: usage_00867.pdb # 8: usage_00919.pdb # 9: usage_01258.pdb # 10: usage_01301.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 51 ( 9.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 51 ( 60.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS-NK--SDFAC-ANAFNN------ 38 usage_00123.pdb 1 --TTERAVLTL---NG-LQ-----IKLHKVVG----ESRDDIVAKMKDLAM 36 usage_00201.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS-NK---DFAC-ANAFN------- 36 usage_00253.pdb 1 --VYITDKTVLD------FKSNSAVAWS-NK--SDFAC-ANAFNN------ 33 usage_00774.pdb 1 QNNYTTNITVSN--RS--------NRAV-LSTLT-EDP-AQVDALFD---- 34 usage_00849.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS-NK--SDFAC-ANAFN------- 37 usage_00867.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS------DFAC-ANAFNN------ 35 usage_00919.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS-NK--D-FAC-ANAFNN------ 37 usage_01258.pdb 1 --VYITDKCVLDMRSM-DFKSNSAVAWS-NK--D-FAC-ANAFN------- 36 usage_01301.pdb 1 --VYITDKCVLDM---MDFKSNSAVAWS-NK--SDFAC-ANAFN------- 35 y t vl a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################