################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:04 2021 # Report_file: c_1380_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00322.pdb # 2: usage_00323.pdb # 3: usage_00324.pdb # 4: usage_00414.pdb # 5: usage_00419.pdb # 6: usage_00852.pdb # 7: usage_00925.pdb # 8: usage_01192.pdb # 9: usage_01819.pdb # 10: usage_01820.pdb # 11: usage_02018.pdb # 12: usage_02020.pdb # 13: usage_02021.pdb # 14: usage_02121.pdb # 15: usage_02369.pdb # # Length: 83 # Identity: 3/ 83 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 83 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 83 ( 45.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEV----ST--S-------DLLSGLLSAVYRDG 46 usage_00323.pdb 1 --QSARCHEARTELQKILSEIIIARKEEEVNK---T--S-------DLLSGLLSAVYRDG 46 usage_00324.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 50 usage_00414.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 50 usage_00419.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 50 usage_00852.pdb 1 LPQSARCHEARTELQKILSEIIIARKEEEV-----T--S-------DLLSGLLSAVYRDG 46 usage_00925.pdb 1 --QSARCHEARTELQKILSEIIIARKAAAVNK-SST--S-------DLLSGLLSAVYRDG 48 usage_01192.pdb 1 LPQSARCREARAELQKILGEIIVAREKEE----ASKNTS-------DLLGGLLKAVYRDG 49 usage_01819.pdb 1 --QSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 49 usage_01820.pdb 1 --QSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 49 usage_02018.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 50 usage_02020.pdb 1 -PQSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 50 usage_02021.pdb 1 --QSARCHEARTELQKILSEIIIARKEEEVNKDSST--S-------DLLSGLLSAVYRDG 49 usage_02121.pdb 1 -TLVASVTEGLALLHGVLDERRRNP--------------LENDVLTMLLQAEADG----- 40 usage_02369.pdb 1 -VVVAEGRSAHAAMEAQLREIAEREVAHP----------S-DTLLGEIARAIVAE----- 43 A ea l L Ei ll usage_00322.pdb 47 TPMSLH---EVCGMIVAAMFAGQ 66 usage_00323.pdb 47 TPMSLH---EVCGMIVAAMFAGQ 66 usage_00324.pdb 51 TPMSLH---EVCGMIVAAMFAGQ 70 usage_00414.pdb 51 TPMSLH---EVCGMIVAAMFAG- 69 usage_00419.pdb 51 TPMSLH---EVCGMIVAAMFAGQ 70 usage_00852.pdb 47 TPMSLH---EVCGMIVAAMFAGQ 66 usage_00925.pdb 49 TPMSLH---EVCGMIVAAMFAG- 67 usage_01192.pdb 50 TRMSLH---EVCGMIVAAMFAGQ 69 usage_01819.pdb 50 TPMSLH---EVCGMIVAAMFAG- 68 usage_01820.pdb 50 TPMSLH---EVCGMIVAAMFAGQ 69 usage_02018.pdb 51 TPMSLH---EVCGMIVAAMFAGQ 70 usage_02020.pdb 51 TPMSLH---EVCGMIVAAMFAG- 69 usage_02021.pdb 50 TPMSLH---EVCGMIVAAMFA-- 67 usage_02121.pdb 41 SRLSTK---ELVALVGAIIAAGT 60 usage_02369.pdb 44 G-----LGEACEGVVLTLILGS- 60 e g a a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################