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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:08:11 2021
# Report_file: c_1404_31.html
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#====================================
# Aligned_structures: 9
#   1: usage_00019.pdb
#   2: usage_00097.pdb
#   3: usage_00098.pdb
#   4: usage_00099.pdb
#   5: usage_00423.pdb
#   6: usage_00424.pdb
#   7: usage_00425.pdb
#   8: usage_00426.pdb
#   9: usage_00427.pdb
#
# Length:         62
# Identity:       40/ 62 ( 64.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     43/ 62 ( 69.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/ 62 ( 30.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00019.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSEL   60
usage_00097.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGD----QDSEL   56
usage_00098.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGP--D-QDSEL   57
usage_00099.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSD--------DSEL   52
usage_00423.pdb         1  ---------VKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSD--Q----DSELL   45
usage_00424.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGGP-D-QDSEL   58
usage_00425.pdb         1  -TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSD--------DSEL   51
usage_00426.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSD---------SEL   51
usage_00427.pdb         1  KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGP--D-QDSEL   57
                                    VKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSD         seL

usage_00019.pdb        61  LS   62
usage_00097.pdb        57  LS   58
usage_00098.pdb        58  LS   59
usage_00099.pdb        53  LS   54
usage_00423.pdb        46  S-   46
usage_00424.pdb        59  LS   60
usage_00425.pdb        52  LS   53
usage_00426.pdb        52  LS   53
usage_00427.pdb        58  LS   59
                           l 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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