################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:27 2021 # Report_file: c_1488_49.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00430.pdb # 2: usage_00431.pdb # 3: usage_00673.pdb # 4: usage_01689.pdb # 5: usage_01690.pdb # 6: usage_02413.pdb # 7: usage_02414.pdb # 8: usage_04841.pdb # 9: usage_06276.pdb # 10: usage_07891.pdb # 11: usage_07892.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 45 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 45 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00430.pdb 1 -SSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 31 usage_00431.pdb 1 SSSLVKEVARHQGDVT------HFLPENVHQALMAKL-------- 31 usage_00673.pdb 1 SSTMVKEIARYGGDVS------KLVPPATLRALKAKLG------- 32 usage_01689.pdb 1 -SSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 31 usage_01690.pdb 1 -SSLVKEVARHQGDVT------HFLPENVHQALMAK--------- 29 usage_02413.pdb 1 SSSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 32 usage_02414.pdb 1 SSSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 32 usage_04841.pdb 1 -LESAQESHALH----HQNRFQFHITREQAREIVKLC-------- 32 usage_06276.pdb 1 -SPIDRTRATRM--------------AIKAVGFIKDNQAAIAEAR 30 usage_07891.pdb 1 -SSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 31 usage_07892.pdb 1 SSSLVKEVARHQGDVT------HFLPENVHQALMAKLA------- 32 s e a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################