################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:59 2021 # Report_file: c_0134_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00022.pdb # 6: usage_00064.pdb # 7: usage_00065.pdb # 8: usage_00066.pdb # 9: usage_00076.pdb # # Length: 213 # Identity: 43/213 ( 20.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/213 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/213 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGI-----VSA 53 usage_00002.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGIHPEEGVSA 58 usage_00016.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGI-----VSA 53 usage_00017.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTG------VSA 52 usage_00022.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGIHPEEGVSA 58 usage_00064.pdb 1 EYGLHHLVYFLLDVAYEEARRGECRDVVLEVGGDGSIALFCTSRTVTA----------EN 50 usage_00065.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGIHPEEGVSA 58 usage_00066.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGIHPEEGVSA 58 usage_00076.pdb 1 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGR-G-IPTGI----GVSA 54 gtGLHHmVfevvDnAidEAlaGhCkeiivtihaDnSvsvqddgR g i sa usage_00001.pdb 54 AEVIMTVL---HAGG-------------KFSGGLH-----G-V-GVSVVNALSQKLELVI 90 usage_00002.pdb 59 AEVIMTVL---HAGGKFDDNSYKVSGG-------L-----HGV-GVSVVNALSQKLELVI 102 usage_00016.pdb 54 AEVIMTVL----KVS---------GGL-------H-----G-V-GVSVVNALSQKLELVI 86 usage_00017.pdb 53 AEVIMTVLDNSYKVS---------GGL-------H-----G-V-GVSVVNALSQKLELVI 89 usage_00022.pdb 59 AEVIMTVL----------------------------------V-GVSVVNALSQKLELVI 83 usage_00064.pdb 51 LVRVATGA---GFLG----------RP-------PGDGWGW-DSMLVVSLALSSRYQVDI 89 usage_00065.pdb 59 AEVIMTVL---HAGGKFD--------DN------S-----G-V-GVSVVNALSQKLELVI 94 usage_00066.pdb 59 AEVIMTVL---HAGGKF-----------------------G-V-GVSVVNALSQKLELVI 90 usage_00076.pdb 55 AEVIMTVL---HA---------------------H-----G-V-GVSVVNALSQKLELVI 83 aevimTvl v gvsVvnALSqklelvI usage_00001.pdb 91 QHEGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 142 usage_00002.pdb 103 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 154 usage_00016.pdb 87 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 138 usage_00017.pdb 90 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 141 usage_00022.pdb 84 QR-GKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 134 usage_00064.pdb 90 WADGRQWRVMGEHGHPQGEGAAVTP--MEPMPVSAERGVRVHFVPDATIFE-VLAFDRAR 146 usage_00065.pdb 95 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 146 usage_00066.pdb 91 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 142 usage_00076.pdb 84 QREGKIHRQIYEHGVPQAPLAVTGETE--------KTGTMVRFWPSLETFTNVTEFEYEI 135 q GkihRqiyEHGvPQaplAvtge ktGtmVrFwPsletFt VteFeyei usage_00001.pdb 143 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFH-- 173 usage_00002.pdb 155 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFH-- 185 usage_00016.pdb 139 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYE 171 usage_00017.pdb 142 LAKRLRELSFLNSGVSIRLRDKRDGKEDH---- 170 usage_00022.pdb 135 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYE 167 usage_00064.pdb 147 LSRRCNELAALAPGLRVSFADLQRGERTLWHLP 179 usage_00065.pdb 147 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFH-- 177 usage_00066.pdb 143 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFH-- 173 usage_00076.pdb 136 LAKRLRELSFLNSGVSIRLRDKRDGKEDHFH-- 166 LakRlrELsfLnsGvsirlrDkrdGkedh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################