################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:48 2021 # Report_file: c_0540_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00031.pdb # # Length: 145 # Identity: 30/145 ( 20.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/145 ( 55.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/145 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -IFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 58 usage_00002.pdb 1 -IFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 58 usage_00003.pdb 1 -IFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 58 usage_00004.pdb 1 -IFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 58 usage_00009.pdb 1 -LFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINL-VSMEVTVNAVAGA 58 usage_00010.pdb 1 -LFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINL-VSMEVTVNAVAGA 58 usage_00024.pdb 1 PIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 59 usage_00025.pdb 1 PIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDL-AEKDFTVNTVAGA 59 usage_00031.pdb 1 -AVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDRE-ESTNLE--DYEPNTVASL 56 f e C e iE tGl tEG YRVSGnK q qfDqd n l tvN VAga usage_00001.pdb 59 MKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 118 usage_00002.pdb 59 MKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 118 usage_00003.pdb 59 MKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 118 usage_00004.pdb 59 MKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 118 usage_00009.pdb 59 LKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLN 118 usage_00010.pdb 59 LKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLN 118 usage_00024.pdb 60 MKSFFSELPDPLVPYSMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 119 usage_00025.pdb 60 MKSFFSELPDPLVPYSMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLN 119 usage_00031.pdb 57 LKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMD 116 K ff LPdpL py l EA ki d lhalke Kkf N vf yvI Hln usage_00001.pdb 119 KVSHNNKVNLMTSENLSICF----- 138 usage_00002.pdb 119 KVSHNNKVNLMTSENLSICF----- 138 usage_00003.pdb 119 KVSHNNKVNLMTSENLSICF----- 138 usage_00004.pdb 119 KVSHNNKVNLMTSENLSICF----- 138 usage_00009.pdb 119 RVSQQHKINLMTADNLSICF----- 138 usage_00010.pdb 119 RVSQQHKINLMTADNLSICF----- 138 usage_00024.pdb 120 RVSHNNKVNLMTSENLSIC------ 138 usage_00025.pdb 120 RVSHNNKVNLMTSENLSIC------ 138 usage_00031.pdb 117 HVIAKELETKMNIQNISIVLSPTVQ 141 Vs k nlMt NlSIc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################