################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:53 2021 # Report_file: c_0004_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00318.pdb # 2: usage_00322.pdb # 3: usage_00323.pdb # 4: usage_00324.pdb # 5: usage_00325.pdb # 6: usage_00326.pdb # 7: usage_00327.pdb # 8: usage_00474.pdb # # Length: 280 # Identity: 38/280 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 236/280 ( 84.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/280 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00318.pdb 1 ------NEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 43 usage_00322.pdb 1 -----ENEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 44 usage_00323.pdb 1 ------NEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 43 usage_00324.pdb 1 -----ENEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 44 usage_00325.pdb 1 -----ENEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 44 usage_00326.pdb 1 -----ENEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 44 usage_00327.pdb 1 -----ENEMTCN-----SKISCISWSSYHKNLLASSDYEGTVILWDGFTG------QRSK 44 usage_00474.pdb 1 RLRVIAEIRHGDIFHSANIVSSIEFDR-DDELFATAGVSRCIKVFDFSSVVNEPMQCPIV 59 nemtcn skiScIswss hknLlAssdyegtvilwDgftg qrsk usage_00318.pdb 44 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 102 usage_00322.pdb 45 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 103 usage_00323.pdb 44 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 102 usage_00324.pdb 45 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 103 usage_00325.pdb 45 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 103 usage_00326.pdb 45 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 103 usage_00327.pdb 45 VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE-AKANVCCVKFSPS 103 usage_00474.pdb 60 EMS-TRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRT 118 vyq hekrcwsvdfNlmdpkllASgsddakVklWstnldnSvasiE akanvccVkFSps usage_00318.pdb 103 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 160 usage_00322.pdb 104 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 161 usage_00323.pdb 103 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 160 usage_00324.pdb 104 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 161 usage_00325.pdb 104 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 161 usage_00326.pdb 104 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 161 usage_00327.pdb 104 SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV--SGEEIVSASTDSQLKL 161 usage_00474.pdb 119 EPSMLVSGSDDCKVKVWCTRQEAS-VI-NIDMKANICCVKYNPGSSNYIAVGSADHHIHY 176 sryhLafGcaDhcVhyydlRntkq im fkghrkavsyaKfv SgeeIvsaStDsqlkl usage_00318.pdb 161 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 218 usage_00322.pdb 162 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 219 usage_00323.pdb 161 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 218 usage_00324.pdb 162 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 219 usage_00325.pdb 162 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 219 usage_00326.pdb 162 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 219 usage_00327.pdb 162 WNVGKP-YCLRSFKGHINEKN-FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT 219 usage_00474.pdb 177 YDLRNISQPLHVFSGHKK--AVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRG-- 232 wnvgkp ycLrsFkGHin n fvglasngdyiAcgSennsLyLyykglsktllTFkf usage_00318.pdb 219 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 254 usage_00322.pdb 220 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 255 usage_00323.pdb 219 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 254 usage_00324.pdb 220 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 255 usage_00325.pdb 220 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 255 usage_00326.pdb 220 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 255 usage_00327.pdb 220 VN----EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 255 usage_00474.pdb 233 --HTNEKNFVGLTVN------SEYLACGSETNEVYVYH-- 262 efvsavcwr SnvLiaansqgtikVle #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################