################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:27 2021 # Report_file: c_1262_43.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00819.pdb # 2: usage_01094.pdb # 3: usage_01278.pdb # 4: usage_01608.pdb # 5: usage_01609.pdb # 6: usage_01610.pdb # 7: usage_01611.pdb # 8: usage_01612.pdb # 9: usage_01613.pdb # # Length: 35 # Identity: 2/ 35 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 35 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 35 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00819.pdb 1 -VLLAEAN-QWPGDVVEYFGDPNTGGDECHMAFHF 33 usage_01094.pdb 1 VIFLAEAF-TRPAMMATLAQ------IGFQQSY-- 26 usage_01278.pdb 1 VMTVGETWNATPKIAEEYSD-PDR--HELSMVFQF 32 usage_01608.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCFNF 32 usage_01609.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCFNF 32 usage_01610.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCF-- 30 usage_01611.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCF-- 30 usage_01612.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCFNF 32 usage_01613.pdb 1 RLLLAEAN-QWPEEVVEYFGTEAE--PEFHMCFNF 32 laEa P ey e m f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################