################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:02 2021 # Report_file: c_0640_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00024.pdb # 2: usage_00027.pdb # 3: usage_00043.pdb # 4: usage_00054.pdb # 5: usage_00055.pdb # 6: usage_00056.pdb # 7: usage_00073.pdb # # Length: 153 # Identity: 44/153 ( 28.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/153 ( 60.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/153 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 SEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSF-LR-NSD-VPLEKNPKL 57 usage_00027.pdb 1 -EEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAKQMFS------------EKNPKL 47 usage_00043.pdb 1 TEKQDALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSFL---ANG-V-DPTNPKL 55 usage_00054.pdb 1 -EEQEALVLKSWAILKKDSANIALRFLLKIFEVAPSASQMFSF-LR-NSD-VPLEKNPKL 56 usage_00055.pdb 1 SEEQEALVLKSWAILKKDSANIALRFLLKIFEVAPSASQMFSF-LRNSDV-PL-EKNPKL 57 usage_00056.pdb 1 -EEQEALVLKSWAILKKDSANIALRFWLKIFEVAPSASQMFSF-LR-NSD-VPLEKNPKL 56 usage_00073.pdb 1 -EEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLR---DSPIPAEQNPKL 56 EeQeALV kSw Kk a l f kifE AP a mFS e NPKL usage_00024.pdb 58 KTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIK 117 usage_00027.pdb 48 KTHAMSVFVMTCEAAAQLRKAGKVTVRETTLKRLGATHLRYGVADGHFEVTGFALLETIK 107 usage_00043.pdb 56 TGHAEKLFALVRDSAGQLKASGTVVADAALGSVHAQ----KAVTDPQFVVVKEALLKTIK 111 usage_00054.pdb 57 KTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIK 116 usage_00055.pdb 58 KTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIK 117 usage_00056.pdb 57 KTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIK 116 usage_00073.pdb 57 KPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIK 116 k HAmsvFvm ce A QLrk GkVtvr ttlkrlga ygV D hFeV k ALL TIK usage_00024.pdb 118 EEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK- 149 usage_00027.pdb 108 EALPADMWSLEMKKAWAEAYSQLVAAIKREMK- 139 usage_00043.pdb 112 AAVGD-KWSDELSRAWEVAYDELAAAI------ 137 usage_00054.pdb 117 EEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK- 148 usage_00055.pdb 118 EEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK- 149 usage_00056.pdb 117 EEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK- 148 usage_00073.pdb 117 EAVPE-MWSPEMKVAWGQAYDHLVAAIKAEMNL 148 e vp mWS mk AW AYd LvAAI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################