################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:34 2021 # Report_file: c_1256_99.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01647.pdb # 2: usage_01705.pdb # 3: usage_01706.pdb # 4: usage_01707.pdb # 5: usage_01708.pdb # 6: usage_02441.pdb # 7: usage_02442.pdb # 8: usage_03929.pdb # # Length: 37 # Identity: 14/ 37 ( 37.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 37 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 37 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01647.pdb 1 -KIIYFLSTGNSARSQMAEGWAKQYLGDEWKVYSAGI 36 usage_01705.pdb 1 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSA-- 35 usage_01706.pdb 1 ---IYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSA-- 32 usage_01707.pdb 1 -KIIYFLCTGNSCRSQMAEGWAKQYLEW--KVYSA-- 32 usage_01708.pdb 1 -KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 36 usage_02441.pdb 1 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 37 usage_02442.pdb 1 -KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 36 usage_03929.pdb 1 MKKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCG- 36 iyFlctgNScRSQMAEGwAKqyl kVySa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################