################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:43 2021 # Report_file: c_0932_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00391.pdb # 2: usage_01114.pdb # 3: usage_01733.pdb # 4: usage_01734.pdb # 5: usage_01735.pdb # 6: usage_01736.pdb # # Length: 52 # Identity: 9/ 52 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 52 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 52 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00391.pdb 1 ILESIFLK-R------NFKKRLFLLTVQKLSYYEYDFERGRRGSKKGSID-- 43 usage_01114.pdb 1 ---GWLTINNIGIMKGGSKEYWFVLTAENLSWYKD---D-EEKEKKYMLSVD 45 usage_01733.pdb 1 ---GWLTINNIGIMKGGSKEYWFVLTAENLSWYKD---D-EEKEKKYMLSVD 45 usage_01734.pdb 1 ---GWLTINNIGIMKGGSKEYWFVLTAENLSWYKD---D-EEKEKKYMLSVD 45 usage_01735.pdb 1 ---GWLTINNIGIMKGGSKEYWFVLTAENLSWYKD---D-EEKEKKYMLSVD 45 usage_01736.pdb 1 ---GWLTINNIGIMKGGSKEYWFVLTAENLSWYKD---D-EEKEKKYMLSVD 45 gwlti n gsKeywFvLTaenLSwYkd d eekeKKymls #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################