################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:32 2021 # Report_file: c_1487_335.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_02698.pdb # 2: usage_02699.pdb # 3: usage_02927.pdb # 4: usage_02928.pdb # 5: usage_02940.pdb # 6: usage_02941.pdb # 7: usage_02942.pdb # 8: usage_02943.pdb # 9: usage_03108.pdb # 10: usage_04895.pdb # 11: usage_04897.pdb # 12: usage_04986.pdb # 13: usage_04987.pdb # 14: usage_04988.pdb # # Length: 33 # Identity: 22/ 33 ( 66.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 33 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 33 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02698.pdb 1 ----SDKLLYQAKLALDEDLRLKVVRKMFELRF 29 usage_02699.pdb 1 ----SDKLLYQAKLALDEDLRLKVVRKMFELRF 29 usage_02927.pdb 1 -----DKLLYQAKLALDEDLRLKVVRKMFELR- 27 usage_02928.pdb 1 -----DKLLYQAKLALDEDLRLKVVRKMFELR- 27 usage_02940.pdb 1 ---RSDKLLYQAKLALDEDLRLKVVRKMFELR- 29 usage_02941.pdb 1 ---RSDKLLYQAKLALDEDLRLKVVRKMFELR- 29 usage_02942.pdb 1 -----DKLLYQAKLALDEDLRLKVVRKMFELR- 27 usage_02943.pdb 1 ----SDKLLYQAKLALDEDLRLKVVRKMFELR- 28 usage_03108.pdb 1 ----SDKLLYQAKLALDEDLRLKVVRKMFELRF 29 usage_04895.pdb 1 ----SDKLLYQAKLALDEDLRLKVVRKMFELR- 28 usage_04897.pdb 1 -----DKLLYQAKLALDEDLRLKVVRKMFEL-- 26 usage_04986.pdb 1 --ARSDKLLYQAKLALDEDLRLKVVRKFELR-- 29 usage_04987.pdb 1 --ARSDKLLYQAKLALDEDLRLKVVRKFELR-- 29 usage_04988.pdb 1 GGARSDKLLYQAKLALDEDLRLKVVRKFELR-- 31 DKLLYQAKLALDEDLRLKVVRK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################