################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:34 2021 # Report_file: c_1236_80.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00100.pdb # 2: usage_00113.pdb # 3: usage_00140.pdb # 4: usage_00154.pdb # 5: usage_00162.pdb # 6: usage_00209.pdb # 7: usage_00219.pdb # 8: usage_00220.pdb # 9: usage_00221.pdb # 10: usage_00222.pdb # 11: usage_00223.pdb # 12: usage_00224.pdb # 13: usage_00325.pdb # 14: usage_00375.pdb # 15: usage_00440.pdb # 16: usage_00455.pdb # 17: usage_00459.pdb # 18: usage_00490.pdb # 19: usage_00499.pdb # 20: usage_00533.pdb # 21: usage_00618.pdb # 22: usage_00619.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 42 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 42 ( 47.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 --TGLLLTRDGGNNNKTNGTEIFRPGG----GDMRDNWRS-- 34 usage_00113.pdb 1 --TGLLLTRDGGIN--ENGTEIFRPGG----GDMRDNWRS-- 32 usage_00140.pdb 1 --TGLLLTRDGGKN----GTEIFRPGG----GDMRDNWRS-- 30 usage_00154.pdb 1 --TGLLLTRDGG-N----GTEIFRPGG----GDMRDNWRS-- 29 usage_00162.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00209.pdb 1 --TGILLTRDGGEN---NSTEIFRPGG----GNIKDNWRS-- 31 usage_00219.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00220.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00221.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00222.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00223.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00224.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00325.pdb 1 --TGLLLTRDGGNS--NNESEIFRPGG----GDMRDNWRS-- 32 usage_00375.pdb 1 --TGLLLTRDGGKD--TNGTEIFRPGG----GDMRDNWRS-- 32 usage_00440.pdb 1 --TGLILTRDGGGN--SNENETFRPGG----GDMRDNWRS-- 32 usage_00455.pdb 1 --TGLLLTRDGGIN--ENGTEIFRPGG----GDMRDNWRS-- 32 usage_00459.pdb 1 -----LLTRD--GG--TNGTEIFRPGG----GDMRDNWRS-- 27 usage_00490.pdb 1 -----LLTRD------N-GTEIFRPGG----GDMRDNWRS-- 24 usage_00499.pdb 1 --TGLLLLRDGGDT--TDNTEIFRPSG----GDMRDNWRS-- 32 usage_00533.pdb 1 GPGHLEIYRTH-------S-GELIVGEIARIGGGGISRIEKK 34 usage_00618.pdb 1 --TGLLLLRD--------DTETFRPGG----GDMRDNWRS-- 26 usage_00619.pdb 1 --TGLLLTRDGGKN--ESEIEIFRPGG----GDMRDNWRS-- 32 l Rd e frpgg G dnwrs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################