################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:03 2021 # Report_file: c_0723_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00173.pdb # 2: usage_00174.pdb # 3: usage_00176.pdb # 4: usage_00178.pdb # 5: usage_00180.pdb # 6: usage_00276.pdb # 7: usage_00298.pdb # # Length: 66 # Identity: 11/ 66 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 66 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 66 ( 39.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00173.pdb 1 NIFIGCAAVADYRAATVAPEKI----ELTIKMVKNPDIVAGVAALK-----DHR--PYVV 49 usage_00174.pdb 1 NIFIGCAAVADYRAATVAPEKI-K-KELTIKMVKNPDIVAGVAALK-----DHR--PYVV 51 usage_00176.pdb 1 NIFIGCAAVADYRAATVAPEKI-K-KELTIKMVKNPDIVAGVAALK-----DHR--PYVV 51 usage_00178.pdb 1 NIFIGCAAVADYRAATVAPEKI----ELTIKMVKNPDIVAGVAALK-----DHR--PYVV 49 usage_00180.pdb 1 NIFIGCAAVADYRAATVAPEKID---ELTIKMVKNPDIVAGVAALK-----DHR--PYVV 50 usage_00276.pdb 1 NVLVMAAAVADFRPAHVAAAKI-KE-PSSIDLVRNDDVLAGAVRARADGQLPNM--RAIV 56 usage_00298.pdb 1 DVVIKTAAVADYRPKYVH-----------IELERTVDILKTLGE---------KDKQLLI 40 n i AAVADyR a Va I v n Di ag v usage_00173.pdb 50 GFAAET 55 usage_00174.pdb 52 GFAAET 57 usage_00176.pdb 52 GFAAET 57 usage_00178.pdb 50 GFAAET 55 usage_00180.pdb 51 GFAAET 56 usage_00276.pdb 57 GF---- 58 usage_00298.pdb 41 GF---- 42 GF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################