################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:29 2021 # Report_file: c_1262_105.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01306.pdb # 2: usage_01979.pdb # 3: usage_01980.pdb # 4: usage_02078.pdb # 5: usage_02208.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 43 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 43 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01306.pdb 1 -----I--FFGVVK-PN-LSPGEFAEIAYQSWLGGLDIAKDD- 33 usage_01979.pdb 1 ------IFFGVVKPNIG-LSPGEFAEIAYQSWLGGLDIAKDD- 35 usage_01980.pdb 1 ------IFFGVVKPNIG-LSPGEFAEIAYQSWLGGLDIAKDD- 35 usage_02078.pdb 1 ------SYLSIGSV--SMGIAGSVV-QEDFFQNYLGMRNEYVD 34 usage_02208.pdb 1 GRPLL----GTTKPKLG-LSGKNYGRVVYEALKGGLDFVKDD- 37 ls g y ggld kdd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################