################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:58 2021 # Report_file: c_0086_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00062.pdb # 2: usage_00071.pdb # 3: usage_00081.pdb # 4: usage_00114.pdb # 5: usage_00127.pdb # 6: usage_00167.pdb # # Length: 120 # Identity: 16/120 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/120 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/120 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 -KVTQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENA-T 58 usage_00071.pdb 1 -SVTQPDIHITVSEGASLELRCNYSYGA-TPYLFWYVQSPGQGLQLLLKYFS-GDTLVQG 57 usage_00081.pdb 1 -KVTQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDD-SR-SEGA 57 usage_00114.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSA-FDYFPWYQQFPGEGPALLIAIRS-VSDKK-E 56 usage_00127.pdb 1 DSVTQMEGPVTLSEEAFLTINCTYTATG-YPSLFWYVQYPGEGLQLLLKATK-ADDKG-S 57 usage_00167.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSA-FDYFPWYQQFPGEGPALLIAIRS-VSDKK-E 56 V Q tv e C Y WY q p l usage_00062.pdb 59 ---VGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRGDYGGSGNKLIFGTGTLLSVKP 115 usage_00071.pdb 58 ---IKGFEAEFKRSQSSFNLRKPSVHWSDAAEYFCAVGET--GA-NNLFFGTGTRLTVIP 111 usage_00081.pdb 58 DFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTLPP-PT-DKLIFGKGTRVTVEP 115 usage_00114.pdb 57 ---DGRFTIFFNKREKKLSLHITDSQPGDSATYFCAASRD--SG-QKLVFGQGTILKVY- 109 usage_00127.pdb 58 ---NKGFEATYRKETTSFHLEKGSVQVSDSAVYFCALSDP--VN--DMRFGAGTRLTVKP 110 usage_00167.pdb 57 ---DGRFTIFFNKREKKLSLHITDSQPGDSATYFCAASKG---A-DRLTFGKGTQLIIQP 109 f L DsA YfCA l FG GT l v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################