################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:26:35 2021 # Report_file: c_1366_97.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00028.pdb # 4: usage_00077.pdb # 5: usage_00079.pdb # 6: usage_00089.pdb # 7: usage_00159.pdb # 8: usage_00538.pdb # 9: usage_00567.pdb # 10: usage_00568.pdb # 11: usage_00772.pdb # 12: usage_00773.pdb # 13: usage_00824.pdb # 14: usage_00849.pdb # 15: usage_00863.pdb # 16: usage_00883.pdb # 17: usage_00884.pdb # 18: usage_00885.pdb # 19: usage_00942.pdb # 20: usage_00954.pdb # 21: usage_00955.pdb # 22: usage_00956.pdb # 23: usage_01036.pdb # 24: usage_01085.pdb # 25: usage_01148.pdb # 26: usage_01149.pdb # # Length: 42 # Identity: 14/ 42 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 42 ( 64.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 42 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM- 41 usage_00013.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMG 42 usage_00028.pdb 1 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE---- 38 usage_00077.pdb 1 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE---- 38 usage_00079.pdb 1 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE---- 38 usage_00089.pdb 1 -PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD----- 36 usage_00159.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD----- 37 usage_00538.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD----- 37 usage_00567.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_00568.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_00772.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA--- 39 usage_00773.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA--- 39 usage_00824.pdb 1 -PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY-------- 33 usage_00849.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA--- 39 usage_00863.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMG 42 usage_00883.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMG 42 usage_00884.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM- 41 usage_00885.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM- 41 usage_00942.pdb 1 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAENSR- 41 usage_00954.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_00955.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_00956.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_01036.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA--- 39 usage_01085.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA--- 39 usage_01148.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 usage_01149.pdb 1 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ---- 38 PeA DfLdKlLryDhq RlTA eAm HpYF v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################