################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:25:32 2021 # Report_file: c_0145_16.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00002.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00052.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00109.pdb # 10: usage_00110.pdb # 11: usage_00124.pdb # 12: usage_00125.pdb # 13: usage_00126.pdb # 14: usage_00127.pdb # 15: usage_00132.pdb # 16: usage_00133.pdb # 17: usage_00134.pdb # 18: usage_00135.pdb # 19: usage_00136.pdb # 20: usage_00137.pdb # 21: usage_00164.pdb # 22: usage_00165.pdb # 23: usage_00166.pdb # 24: usage_00178.pdb # 25: usage_00239.pdb # 26: usage_00240.pdb # 27: usage_00253.pdb # 28: usage_00254.pdb # 29: usage_00257.pdb # 30: usage_00265.pdb # 31: usage_00372.pdb # 32: usage_00373.pdb # 33: usage_00374.pdb # 34: usage_00375.pdb # 35: usage_00376.pdb # 36: usage_00377.pdb # 37: usage_00386.pdb # 38: usage_00387.pdb # 39: usage_00388.pdb # 40: usage_00389.pdb # 41: usage_00410.pdb # 42: usage_00434.pdb # 43: usage_00435.pdb # 44: usage_00507.pdb # 45: usage_00527.pdb # 46: usage_00563.pdb # # Length: 126 # Identity: 53/126 ( 42.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/126 ( 48.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/126 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 VQLQQSGAELVRPGASVKLSCTTSGFNIKDIYIHWVKQRPEQGLEWIGRLDPANGYTKYD 60 usage_00048.pdb 1 -KLQQSGAELVRSGASVKLSCTASGFNIKDYYIQWVKQRPEQGLEWIGWIDPENGNSEYA 59 usage_00049.pdb 1 -KLQQSGAELVRSGASVKLSCTASGFNIKDYYIQWVKQRPEQGLEWIGWIDPENGNSEYA 59 usage_00052.pdb 1 -QLQQSGAELLRPGASVKLSCIVSGFKIKDTSMHWVKQRPEQGLEWIGRIDPANDNSEYD 59 usage_00064.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00065.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00069.pdb 1 -KLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYD 59 usage_00070.pdb 1 VKLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYD 60 usage_00109.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDNYMHWVKQRP---LEWIGRIDPANGNTKYD 57 usage_00110.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDNYMHWVKQRPEQGLEWIGRIDPANGNTKYD 60 usage_00124.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00125.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00126.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00127.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00132.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00133.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00134.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00135.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00136.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00137.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00164.pdb 1 VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYV 60 usage_00165.pdb 1 VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYV 60 usage_00166.pdb 1 VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYV 60 usage_00178.pdb 1 -LLEQSGAELVKPGASVKLSCTASGFNIEDSYIHWVKQRPEQGLEWIGRIDPEDGETKYA 59 usage_00239.pdb 1 -QLQQSGAELVKPGASVRLSCSASGFNIKDTYMFWVKQRPEQGLDWIGRINPANGISKYD 59 usage_00240.pdb 1 -QLQQSGAELVKPGASVRLSCSASGFNIKDTYMFWVKQRPEQGLDWIGRINPANGISKYD 59 usage_00253.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00254.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00257.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLEWIGRIDPASGNTKYD 60 usage_00265.pdb 1 -QLQQSGAEVVRSGASVKLSCTASGFNIKDYYIHWVKQRPEKGLEWIGWID-EIGDTEYV 58 usage_00372.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00373.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00374.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00375.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00376.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00377.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00386.pdb 1 VQLQQSGAELVKPGASVKLSCTSSGFNNKDTFFQWVKQRPEEGLEWIGRIDPANGFTKYD 60 usage_00387.pdb 1 -QLQQSGAELVKPGASVKLSCTSSGFNNKDTFFQWVKQRPEEGLEWIGRIDPANGFTKYD 59 usage_00388.pdb 1 -QLQQSGAELVKPGASVKLSCTSSGFNNKDTFFQWVKQRPEEGLEWIGRIDPANGFTKYD 59 usage_00389.pdb 1 -QLQQSGAELVKPGASVKLSCTSSGFNNKDTFFQWVKQRPEEGLEWIGRIDPANGFTKYD 59 usage_00410.pdb 1 -QLQQSGAEIVRSGASVKLSCAASGFNIKDYYMHWVKQRPEQGLEWIGWIDPENGDIAYA 59 usage_00434.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00435.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00507.pdb 1 -QLQQSGAELVRPGASVKLSCTTSGFNIKDIYIHWVKQRPEQGLEWIGRLDPANGYTKYD 59 usage_00527.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00563.pdb 1 VQLQQSGAEIVRSGASVKLSCAASGFNIKDYYMHWVKQRPEQGLEWIGWIDPENGDIAYA 60 LqQSGAE v GASV LSC SGFn kD WVK RP L WIG g Y usage_00002.pdb 61 PKFQGKATITVDTSSNTAYLHLSSLTSEDTAVYYCDGYY---S-YY----DMDYWG--PG 110 usage_00048.pdb 60 PRFQGKATMTADTLSNTAYLQLSSLTSEDTAVYYCNADL------------HDYWG--QG 105 usage_00049.pdb 60 PRFQGKATMTADTLSNTAYLQLSSLTSEDTAVYYCNADL------------HDYWG--QG 105 usage_00052.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTLS--------------HFWG--QG 103 usage_00064.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00065.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00069.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWD---W--Y-----FDVWG--QG 107 usage_00070.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWD---W--Y-----FDVWG--QG 108 usage_00109.pdb 58 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARHY-D-G--YFLY-YFEYWG--QG 110 usage_00110.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARHY---D-G--YF-LYYFEYWGQG 113 usage_00124.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00125.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00126.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00127.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00132.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00133.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00134.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00135.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00136.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00137.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00164.pdb 61 PTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGV---I-TM--Q-AMDYWG--QG 111 usage_00165.pdb 61 PTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGV---I-TM----AMDYWG--QG 110 usage_00166.pdb 61 PTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVIT-M-MG-YQ-AMDYWG--QG 114 usage_00178.pdb 60 PKFQGKATITADTSSNTAYLHLRRLTSEDTAIYYCGRGA---Y-YI----KEDFWG--QG 109 usage_00239.pdb 60 PRFQGKATLTADTSSNTAYLQLDNLTSEDTAVYYCAIEK------------DLPWG--QG 105 usage_00240.pdb 60 PRFQGKATLTADTSSNTAYLQLDNLTSEDTAVYYCAIEK------------DLPWG--QG 105 usage_00253.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00254.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00257.pdb 61 PKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCAGYD---Y-----G-NFDYWG--QG 109 usage_00265.pdb 59 PKFQGKATMTADTSSNTAYLQL---TSEDTAVYYCNAGH-D-Y--D----R-PYWG--QG 104 usage_00372.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00373.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00374.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00375.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00376.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00377.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00386.pdb 61 PKFQGKATITVDTSSNTAYLQLNSLTSEDTALYYCTRWD---T-YG-AA-WFAYWG--QG 112 usage_00387.pdb 60 PKFQGKATITVDTSSNTAYLQLNSLTSEDTALYYCTRWD---T-YG-AA-WFAYWG--QG 111 usage_00388.pdb 60 PKFQGKATITVDTSSNTAYLQLNSLTSEDTALYYCTRWD---T-YG-AA-WFAYWG--QG 111 usage_00389.pdb 60 PKFQGKATITVDTSSNTAYLQLNSLTSEDTALYYCTRWD---T-YG-AA-WFAYWG--QG 111 usage_00410.pdb 60 PKFQGKATMTADTSSNTAYLQLSRLTSEDTAVYFCNGRG---GM-I-TTDFFDYWG--QG 112 usage_00434.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00435.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00507.pdb 60 PKFQGKATITVDTSSNTAYLHLSSLTSEDTAVYYCDGYY---S-YY----DMDYWG--PG 109 usage_00527.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL---Y--D-YY-AMDYWG--QG 111 usage_00563.pdb 61 PKFQGKATMTADTSSNTAYLQLSRLTSEDTAVYFCNGRG-GMI-TT-D--FFDYWG--QG 113 P FQgK T T DT SNTAYL L TSEDTA Y C wg G usage_00002.pdb 111 TSVTVS 116 usage_00048.pdb 106 TTLTVS 111 usage_00049.pdb 106 TTLTVS 111 usage_00052.pdb 104 TTLTVS 109 usage_00064.pdb 112 TSVTVS 117 usage_00065.pdb 112 TSVTVS 117 usage_00069.pdb 108 TTVTV- 112 usage_00070.pdb 109 TTVTVS 114 usage_00109.pdb 111 TTLTVS 116 usage_00110.pdb 114 TTLTVS 119 usage_00124.pdb 112 TSVTVS 117 usage_00125.pdb 112 TSVTVS 117 usage_00126.pdb 112 TSVTVS 117 usage_00127.pdb 112 TSVTVS 117 usage_00132.pdb 112 TSVTVS 117 usage_00133.pdb 112 TSVTVS 117 usage_00134.pdb 112 TSVTVS 117 usage_00135.pdb 112 TSVTVS 117 usage_00136.pdb 112 TSVTVS 117 usage_00137.pdb 112 TSVTVS 117 usage_00164.pdb 112 TTVTTS 117 usage_00165.pdb 111 TTVTTS 116 usage_00166.pdb 115 TTVTTS 120 usage_00178.pdb 110 TTLTVS 115 usage_00239.pdb 106 TLVTVS 111 usage_00240.pdb 106 TLVTVS 111 usage_00253.pdb 112 TSVTVS 117 usage_00254.pdb 112 TSVTVS 117 usage_00257.pdb 110 TTLTVS 115 usage_00265.pdb 105 TLVTVS 110 usage_00372.pdb 112 TSVTVS 117 usage_00373.pdb 112 TSVTVS 117 usage_00374.pdb 112 TSVTVS 117 usage_00375.pdb 112 TSVTVS 117 usage_00376.pdb 112 TSVTVS 117 usage_00377.pdb 112 TSVTVS 117 usage_00386.pdb 113 TLVTVS 118 usage_00387.pdb 112 TLVTVS 117 usage_00388.pdb 112 TLVTV- 116 usage_00389.pdb 112 TLVTVS 117 usage_00410.pdb 113 TTLTVS 118 usage_00434.pdb 112 TSVTVS 117 usage_00435.pdb 112 TSVTVS 117 usage_00507.pdb 110 TSVTVS 115 usage_00527.pdb 112 TSVTVS 117 usage_00563.pdb 114 TTLTV- 118 T T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################