################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:41 2021 # Report_file: c_1365_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00271.pdb # 4: usage_00272.pdb # 5: usage_00304.pdb # 6: usage_00579.pdb # # Length: 67 # Identity: 23/ 67 ( 34.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 67 ( 34.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 67 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 NTTSSATIVGAFTGLAPEKVT------GRGTGI---SLKTKMEIVGRALAVNKPNPQDGL 51 usage_00038.pdb 1 NTTSSATIVGAFTGLAPEKVTG--RGSRLK---------TKMEIVGRALAVNKPNPQDGL 49 usage_00271.pdb 1 -TTPAAAMVSVFTGSDAKEVVGIG---ANLPPSRID---NKVDVVRRAIAINQPNPRDGI 53 usage_00272.pdb 1 -TTPAAAMVSVFTGSDAKEVVGIG---ANLPPSRID---NKVDVVRRAIAINQPNPRDGI 53 usage_00304.pdb 1 -TTPAAAMVSVFTGSDAKEVVGIG---ANLPPSRID---NKVDVVRRAIAINQPNPRDGI 53 usage_00579.pdb 1 -TTPAAAMVSVFTGSDAKEVVGIG---ANLPPSRID---NKVDVVRRAIAINQPNPRDGI 53 TT A V FTG V K V RA A N PNP DG usage_00037.pdb 52 DVLAK-- 56 usage_00038.pdb 50 DVLAKVG 56 usage_00271.pdb 54 DVLSK-- 58 usage_00272.pdb 54 DVLSK-- 58 usage_00304.pdb 54 DVLSK-- 58 usage_00579.pdb 54 DVLSK-- 58 DVL K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################