################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:56 2021 # Report_file: c_0777_216.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00310.pdb # 2: usage_00311.pdb # 3: usage_00424.pdb # 4: usage_00436.pdb # 5: usage_00801.pdb # 6: usage_01239.pdb # 7: usage_01240.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 68 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 68 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00310.pdb 1 -KVGVAGFG---GLGSMAVKYAVAMGAE-VSVFARNEHKKQDALSMGV------------ 43 usage_00311.pdb 1 -KVGVAGFG---GLGSMAVKYAVAMGAE-VSVFARNEHKKQDALSMGV------------ 43 usage_00424.pdb 1 -VIVDYGCG---N--GFYCKYLLEFATK-LYCIDINVIALKEVKEKFD------------ 41 usage_00436.pdb 1 NRWGLIGASTIA--REWVIGAIRATGGEVVSMMSTSAERGAAYATENG------------ 46 usage_00801.pdb 1 SSVGVLGLG---TMGRGIAISFARVGIS-VVAVESDPKQLDAAKKIITFTLEKEASRAHQ 56 usage_01239.pdb 1 -SIGVVGFG---RIGKLAVKFAKAFGAN-VTVISTSISKKQEAIEKYG------------ 43 usage_01240.pdb 1 -SIGVVGFG---RIGKLAVKFAKAFGAN-VTVISTSISKKQEAIEKYG------------ 43 g G g g v usage_00310.pdb 44 --KHFYT- 48 usage_00311.pdb 44 --KHFYT- 48 usage_00424.pdb 42 --SVITLS 47 usage_00436.pdb 47 --IGKSVT 52 usage_00801.pdb 57 NGQASAKP 64 usage_01239.pdb 44 --VDRFLI 49 usage_01240.pdb 44 --VDRFLI 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################