################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:23 2021 # Report_file: c_0610_88.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00334.pdb # 2: usage_00656.pdb # 3: usage_00657.pdb # # Length: 66 # Identity: 22/ 66 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 66 ( 89.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 66 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00334.pdb 1 AYDSESFQASNHRHGFELHFQQAHLQADTAVLAQGFEVVCAFVNDDLSRPVLERLAAGGT 60 usage_00656.pdb 1 ---AGPMQ----KVFTDTYFVEPPLDKDTAQLARGYDVAVLFVNDRADASVIKELAKAGV 53 usage_00657.pdb 1 --LAGPMQ----KVFTDTYFVEPPLDKDTAQLARGYDVAVLFVNDRADASVIKELAKAGV 54 agpmQ kvftdtyFveppLdkDTAqLArGydVavlFVNDradasVikeLAkaGv usage_00334.pdb 61 RLVALR 66 usage_00656.pdb 54 KLIALR 59 usage_00657.pdb 55 KLIALR 60 kLiALR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################