################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:33 2021 # Report_file: c_1170_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00090.pdb # 2: usage_00297.pdb # 3: usage_00298.pdb # 4: usage_00299.pdb # 5: usage_00300.pdb # 6: usage_00311.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 64 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 64 ( 70.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 -VRVFQAT---------C------------SVVLGPKWPSHYLM----VPGGKHNMDFYV 34 usage_00297.pdb 1 TFNHMVLHTSDG--------CTIDNDGFTGNLKTSN----CY-VYAPGQDANA--GCGIE 45 usage_00298.pdb 1 TFNHMVLHTSDG--------CTIDNDGFTGNLKTSN----CY-VYAPGQDANA--GCGIE 45 usage_00299.pdb 1 TFNHMVLHTSDG--------CTIDNDGFTGNLKTSN----CY-VYAPGQDANA--GCGIE 45 usage_00300.pdb 1 TFNHMVLHTSDG--------CTIDNDGFTGNLKTSN----CY-VYAPGQDANA--GCGIE 45 usage_00311.pdb 1 GIYFIPLNNVC-YDMMNTSNVTK--LPP--GKDMI--------------------GRIDA 35 l g usage_00090.pdb 35 EALA 38 usage_00297.pdb 46 ATD- 48 usage_00298.pdb 46 ATD- 48 usage_00299.pdb 46 ATD- 48 usage_00300.pdb 46 ATD- 48 usage_00311.pdb 36 ID-- 37 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################