################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1456_134.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00236.pdb # 2: usage_00237.pdb # 3: usage_00238.pdb # 4: usage_00239.pdb # 5: usage_00661.pdb # 6: usage_00662.pdb # 7: usage_00967.pdb # 8: usage_01165.pdb # 9: usage_01166.pdb # 10: usage_01273.pdb # 11: usage_01274.pdb # 12: usage_01275.pdb # # Length: 24 # Identity: 2/ 24 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 24 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 24 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 ----KIFSLNSNPELAKEIADIV- 19 usage_00237.pdb 1 ----KIFSLNSNPELAKEIADIVG 20 usage_00238.pdb 1 ----KIFSLNSNPELAKEIADIV- 19 usage_00239.pdb 1 --NLKIFSLNSNPELAKEIADIVG 22 usage_00661.pdb 1 --NLKIFSLNSNPELAKEIADIV- 21 usage_00662.pdb 1 ----KIFSLNSNPELAKEIADIVG 20 usage_00967.pdb 1 VYGVTIPNNAENSELATEFVALLL 24 usage_01165.pdb 1 --GMKIIALRSSLKLAARIAEELK 22 usage_01166.pdb 1 --GMKIIALRSSLKLAARIAEELK 22 usage_01273.pdb 1 --GLMVFTGNANPALAQEVVKILG 22 usage_01274.pdb 1 ----MVFTGNANPALAQEVVKILG 20 usage_01275.pdb 1 --GLMVFTGNANPALAQEVVKILG 22 LA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################