################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:25 2021 # Report_file: c_1111_19.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00403.pdb # 2: usage_00404.pdb # 3: usage_00541.pdb # # Length: 177 # Identity: 152/177 ( 85.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 164/177 ( 92.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/177 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00403.pdb 1 CLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVGMGMDHLRY 60 usage_00404.pdb 1 --------IVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVGMGMDHLRY 52 usage_00541.pdb 1 CLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVG-G-DHLRY 58 IVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVG G DHLRY usage_00403.pdb 61 YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGN 120 usage_00404.pdb 53 YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGN 112 usage_00541.pdb 59 YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVN-GLKGLQICGNSI-PLLTFYGN 116 YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVN GLKGLQICGNSI PLLTFYGN usage_00403.pdb 121 SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKK 177 usage_00404.pdb 113 SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKK 169 usage_00541.pdb 117 SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALFGVQAVDLRTYKK- 172 SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALmfgvqavdlrtyK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################