################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:48 2021 # Report_file: c_0328_24.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_00141.pdb # 4: usage_00142.pdb # 5: usage_00143.pdb # 6: usage_00144.pdb # 7: usage_00279.pdb # 8: usage_00397.pdb # 9: usage_00399.pdb # 10: usage_00576.pdb # 11: usage_00577.pdb # 12: usage_00578.pdb # 13: usage_00579.pdb # # Length: 177 # Identity: 20/177 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/177 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/177 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 --------ATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 52 usage_00139.pdb 1 --------ATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 52 usage_00141.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00142.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00143.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00144.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00279.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00397.pdb 1 TPAILESLISINNKLQQPEAAAGVLEYAMKHFGELE----IQATWYEKLHEWEDALVAYD 56 usage_00399.pdb 1 TPAILESLISINNKLQQPEAAAGVLEYAMKHFGELE----IQATWYEKLHEWEDALVAYD 56 usage_00576.pdb 1 --------ATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 52 usage_00577.pdb 1 --------ATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 52 usage_00578.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 usage_00579.pdb 1 -------QATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCC 53 KL E A M E L EW usage_00138.pdb 53 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 107 usage_00139.pdb 53 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 107 usage_00141.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00142.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00143.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00144.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00279.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00397.pdb 57 KKMDTNKD--DPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMARMAAAAAWG 114 usage_00399.pdb 57 KKMDTNKD--DPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMARMAAAAAWG 114 usage_00576.pdb 53 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 107 usage_00577.pdb 53 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 107 usage_00578.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 usage_00579.pdb 54 EKWTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTC-MIP---RD-THDGAFYRAVLALH 108 K D LG W C A A A usage_00138.pdb 108 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYKL- 161 usage_00139.pdb 108 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 160 usage_00141.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 usage_00142.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 usage_00143.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYKLV 163 usage_00144.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 usage_00279.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 usage_00397.pdb 115 LGQWDSMEEYTCMIP------------------------RDTHDGAFYRAVLALHQD 147 usage_00399.pdb 115 LGQWDSMEEYTCMIP------------------------RDTHDGAFYRAVLALHQD 147 usage_00576.pdb 108 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 160 usage_00577.pdb 108 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 160 usage_00578.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 usage_00579.pdb 109 QDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVS--CHMLSELEEVIQYK-- 161 H V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################