################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:17 2021 # Report_file: c_0907_24.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00166.pdb # 2: usage_00167.pdb # 3: usage_00621.pdb # 4: usage_00622.pdb # 5: usage_00653.pdb # # Length: 65 # Identity: 5/ 65 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 65 ( 44.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 65 ( 49.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 ---------RTQVFRNILFRAPELRSLLGERAALFFFLMLSSSL--RFPLRA-LDGRGLY 48 usage_00167.pdb 1 ---------RTQVFRNILFRAPELRSLLGERAALFFFLMLL-----RFPLRA-LDGRGLY 45 usage_00621.pdb 1 ---------RTQVFRNILFRAPELRSLLGERAALVFFLMLSSSL--RFPLRS-LDGRGLY 48 usage_00622.pdb 1 ---------RTQVFRNILFRAPELRSLLGERAALVFFLMLSSSL--RFPLRS-LDGRGLY 48 usage_00653.pdb 1 FTGIMLRKSRVKFLESEIICFP-----------------TTQMMRNLLIAQVTFSGQKLY 43 RtqvfrnilfraP l rfplr ldGrgLY usage_00166.pdb 49 RLTVG 53 usage_00167.pdb 46 RLTVG 50 usage_00621.pdb 49 NLVVG 53 usage_00622.pdb 49 NLVVG 53 usage_00653.pdb 44 LMTSH 48 l vg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################