################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:08:49 2021 # Report_file: c_0385_32.html ################################################################################################ #==================================== # Aligned_structures: 44 # 1: usage_00029.pdb # 2: usage_00037.pdb # 3: usage_00070.pdb # 4: usage_00088.pdb # 5: usage_00093.pdb # 6: usage_00127.pdb # 7: usage_00136.pdb # 8: usage_00140.pdb # 9: usage_00141.pdb # 10: usage_00167.pdb # 11: usage_00188.pdb # 12: usage_00197.pdb # 13: usage_00217.pdb # 14: usage_00262.pdb # 15: usage_00278.pdb # 16: usage_00281.pdb # 17: usage_00330.pdb # 18: usage_00348.pdb # 19: usage_00354.pdb # 20: usage_00363.pdb # 21: usage_00368.pdb # 22: usage_00414.pdb # 23: usage_00417.pdb # 24: usage_00419.pdb # 25: usage_00420.pdb # 26: usage_00421.pdb # 27: usage_00423.pdb # 28: usage_00426.pdb # 29: usage_00429.pdb # 30: usage_00430.pdb # 31: usage_00431.pdb # 32: usage_00470.pdb # 33: usage_00477.pdb # 34: usage_00480.pdb # 35: usage_00481.pdb # 36: usage_00503.pdb # 37: usage_00504.pdb # 38: usage_00509.pdb # 39: usage_00516.pdb # 40: usage_00525.pdb # 41: usage_00545.pdb # 42: usage_00548.pdb # 43: usage_00561.pdb # 44: usage_00565.pdb # # Length: 87 # Identity: 7/ 87 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 87 ( 12.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 87 ( 23.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 --------GVVQPGRSLRLSCAASGFMFS-SYVMHWVRQPPGKGLEWVAVIWYD-G-SKT 49 usage_00037.pdb 1 -QLVESGGGLVQPGGSLTLSCKASGFDFS-TYYMSWVRQAPGKGLEWIGTVYVR-Q-GTT 56 usage_00070.pdb 1 --------GLVQPGGSLRLSCAASGFNVS-YSSIHWVRQAPGKGLEWVASIYPY-Y-GST 49 usage_00088.pdb 1 VKLEESGGGLVQPGGSMKLSCATSGFTFS-DAWMDWVRQSPEKGLEWVAEIRNKANNHAT 59 usage_00093.pdb 1 -QLLESGGGLVQPGGSLRLSCAASGFTFS-TYQMSWVRQAPGKGLEWVSGIVSS-G-GST 56 usage_00127.pdb 1 -SLEESGGDLVKPGASLTLTCTASGFSFTNNYYMCWVRQAPGKGLEWIACIYGGGR-DIV 58 usage_00136.pdb 1 --------GLVQPGGSLRLSCAASGFTFS-NTYISWVRQAPGKGLEWVASITPS-S-GQT 49 usage_00140.pdb 1 VQLQASGGGLVQPGGSLRLSCTASGFTDD-YYAIGWFRQAPGKEREGVSCITNF-D-GGT 57 usage_00141.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFS-NFGMHWVRQAPEKGLEWVAYISSG-G-SSI 57 usage_00167.pdb 1 VKLVESEGGLVQPGSSMKLSCTASGFTFS-DYYMAWVRQVPEKGLEWVANINYD-G-SST 57 usage_00188.pdb 1 -QLVETGGGLVQPGGSLTLSCAGSGGTLE-HYAIGWFRQAPGKEHEWLVCNRGE-Y-GST 56 usage_00197.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFTFS-SYDMHWVRQATGKGLEWVSAIGTA-G--DT 55 usage_00217.pdb 1 -QLVQSGGGVVQPGRSLRLSCSSSGFIFS-SYAMYWVRQAPGKGLEWVAIIWDD-G-SDQ 56 usage_00262.pdb 1 -QLQESGGGLVQPGGSLRLSCAASGFTFS-SAIMTWVRQAPGKGREWVSTIGSD-G-SIT 56 usage_00278.pdb 1 VQLVESGGGVVQPGKSLRLSCAASRFSFN-RYGMHWVRQAPGKGLEWVAAISYD-G-TDK 57 usage_00281.pdb 1 VQLVESGGGVVQPGKSLRLSCAASQFSFN-RYGMHWVRQAPGKGLEWVAAISYD-G-TDK 57 usage_00330.pdb 1 VQLVESGGGLVQPGRSLRLSCAASGFTFD-DYAMHWVRQAPGKGLEWVSGISWN-S-GSI 57 usage_00348.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFS-SYGMSWVRQTPDKGLEWVATISSG-G-SYT 57 usage_00354.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFNIK-DTYIGWVRRAPGKGEEWVASIYPT-N-GYT 57 usage_00363.pdb 1 VQLQESGGGLVQPGGSLRLSCAASGFTFS-SAIMTWVRQAPGKGREWVSTIGSD-G-SIT 57 usage_00368.pdb 1 -QLVESGGGLIRPGGSLRLSCKGSGFIFE-NFGFGWVRQGPGKGLEWVSGTNWN-G-GDS 56 usage_00414.pdb 1 --------GLVKPGGSLRLSCSASGFDFD-NAWMTWVRQPPGKGLEWVGRITGPGEGWSV 51 usage_00417.pdb 1 --LVETGGGLIQPGGSLRLSCAASGFTVS-SNYMSWVRQAPGKGLEWVSVIYSG-G--ST 54 usage_00419.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFNLS-SSYMHWVRQAPGKGLEWVASISSS-Y-GST 57 usage_00420.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFNLS-SSYMHWVRQAPGKGLEWVASISSS-Y-GST 56 usage_00421.pdb 1 -SLEESGGRLVTPGTPLTLTCTVSGFSLS-TYNIHWVRQAPGKGLEWIGVIDTG---GGT 55 usage_00423.pdb 1 VQLVESGGGLVQPGGSLKLSCAASGFTFS-SHWMHWVRQAPGKGLVWVSRTNSD-G-SST 57 usage_00426.pdb 1 VQLVESGGNVVQPGGSLRLSCTASGFSFD-DSTMHWVRQAPGKGLQWVSLISWN-G-GRT 57 usage_00429.pdb 1 -VKLQESGAVVQPGGSLRLSCAASGFTGS-DYDMSWIRQAPGKGLEWVSGILGG-S-ERS 56 usage_00430.pdb 1 -VKLQESGAVVQPGGSLRLSCAASGFTGS-DYDMSWIRQAPGKGLEWVSGILGG-S-ERS 56 usage_00431.pdb 1 --------GLIQPGGSLRLSCAVSGFTVS-SKYMTWVRQAPGKGLEWVSVIYGG-G--ST 48 usage_00470.pdb 1 VYLVESGGDLVQPGSSLKVSCAASGFTFS-DFWMYWVRQAPGKGLEWVGRIKNIPNNYAT 59 usage_00477.pdb 1 VQLVESGGGVVQPGRSLRLSCSTSGFTFS-DYYMYWVRQAPGKGLEWVAYMSNV-G-AIT 57 usage_00480.pdb 1 --------GLVQPGGSLKLSCAASGFDYS-RYWMSWVRQAPGKGLKWIGEINPV-S-STI 49 usage_00481.pdb 1 --------GLVQPGGSLKLSCAASGFDYS-RYWMSWVRQAPGKGLKWIGEINPV-S-STI 49 usage_00503.pdb 1 -QLLESGGGLVQPGGSLRLSCAASGFTFS-DEDMSWVRQAPGKGLEWVSAISGS-G-GST 56 usage_00504.pdb 1 -QLLESGGGLVQPGGSLRLSCAASGFTFS-DEDMSWVRQAPGKGLEWVSAISGS-G-GST 56 usage_00509.pdb 1 --------GLVKPGGSLKLSCAASGFTFS-SYAMSWVRQTPEKRLEWVATISSG-G-TYT 49 usage_00516.pdb 1 --------GLVQPG---RLSCAASGFNVS-SYSIHWVRQAPGKGLEWVASISSY-Y-GST 46 usage_00525.pdb 1 VQLQESGGGSVQAGGSLRLSCAASGYQYS-LLCMAWFRQVLGEGREGVAFITTY-N-GAM 57 usage_00545.pdb 1 VKLVESGGDLVKPGGSLKLSCAASGFSFS-SHGMSWVRQTPDKRLEWVALISRG-G-SYT 57 usage_00548.pdb 1 --------GLVQPGGSLRLSCAASGFNIK-DTYIHWVRQAPGKGLEWVARIYPT-N-GYT 49 usage_00561.pdb 1 --------GLVQPGGSLRLSCAASGFNVK-TGLIHWVRQAPGKGLEWVAYISPY-Y-GST 49 usage_00565.pdb 1 --------NVVQPGGSLRLSCTASGFSFD-DSTMHWVRQAPGKGLQWVSLISWN-G-GRT 49 pG l C S W Rq k usage_00029.pdb 50 YFADSMRGRLTVSRDNSKNALYLQMN- 75 usage_00037.pdb 57 YYASWLNGRFTISSDNAQNTVDLKMNS 83 usage_00070.pdb 50 SYADSVKGRFTISADTSKNTAYLQMNS 76 usage_00088.pdb 60 YYAESVKGRFTISRDDSKRRVYLQMNT 86 usage_00093.pdb 57 AYADSVKGRFTISRDNSKNTLYLQMNS 83 usage_00127.pdb 59 FYATWAKGRFTISKTSS-TTVTLQMTS 84 usage_00136.pdb 50 DYADSVKGRFTISADTSKNTAYLQMNS 76 usage_00140.pdb 58 YYADSVKSRFTMSRDNK-NTVYLQMNS 83 usage_00141.pdb 58 NYADTVKGRFTISRDNPKNTLFLQMTS 84 usage_00167.pdb 58 YYLDSLKGRFIISRDIAKNILYLQMSS 84 usage_00188.pdb 57 VYVDSVKGRFTASRDNAKNTVYLQLNS 83 usage_00197.pdb 56 YYPDSVKGRFTISRENAKNSLYLQMNS 82 usage_00217.pdb 57 HYADSVKGRFTISRNDSKNTLFLQMD- 82 usage_00262.pdb 57 TYADSVKGRFTISRDNARNTLYLQMNS 83 usage_00278.pdb 58 YHADKVWGRFTISRDNSKNTLYLQMNS 84 usage_00281.pdb 58 YHADKVWGRFTISRDNSKNTLYLQMN- 83 usage_00330.pdb 58 GYADSVKGRFTISRDNAKNSLYLQMNS 84 usage_00348.pdb 58 YYPDNVKGRFTISRDNAKNTLYLQMSS 84 usage_00354.pdb 58 RYADSVKGRFTISADTSKNTAYLQMNS 84 usage_00363.pdb 58 TYADSVKGRFTISRDNARNTLYLQMNS 84 usage_00368.pdb 57 RYGDSVKGRFTISRDNSNNFVYLQMNS 83 usage_00414.pdb 52 DYAAPVEGRFTISRLNSINFLYLEMNN 78 usage_00417.pdb 55 YYADSVKGRFTISRDNSKNTLYLQMNS 81 usage_00419.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNS 84 usage_00420.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNS 83 usage_00421.pdb 56 YFASWAKGRFAISKTSS-TTVDLKMTS 81 usage_00423.pdb 58 SYADSVKGRFMISRDNSKNTVYLHMNG 84 usage_00426.pdb 58 YYADSVKGRFTISRDNSKNSLYLQMNS 84 usage_00429.pdb 57 YYRDSVKGRSTISRDNSRKTLYLEMNS 83 usage_00430.pdb 57 YYRDSVKGRSTISRDNSRKTLYLEMNS 83 usage_00431.pdb 49 YYADSVVGRFTISRDNSKNTLYLQMNS 75 usage_00470.pdb 60 EYADSVRGRFTISRDDSRNSIYLQMNR 86 usage_00477.pdb 58 DYPDTVKGRFTISRDNSKNTLFLQMDS 84 usage_00480.pdb 50 NYTPSLKDKFIISRDNAKDTLYLQISK 76 usage_00481.pdb 50 NYTPSLKDKFIISRDNAKDTLYLQISK 76 usage_00503.pdb 57 YYADSVKGRFTISRDNSKNTLYLQMN- 82 usage_00504.pdb 57 YYADSVKGRFTISRDNSKNTLYLQMN- 82 usage_00509.pdb 50 YYPDSVKGRFTISRDNAENTLYLQMSS 76 usage_00516.pdb 47 SYADSVKGRFTISADTNTA-Y-LQMNS 71 usage_00525.pdb 58 RYADTVKGRFTVSQDKDKNTVYLQMN- 83 usage_00545.pdb 58 YYSDSVKGRFTISRDNAKNTLYLQMS- 83 usage_00548.pdb 50 RYADSVKGRFTISADTSKNTAYLQMNS 76 usage_00561.pdb 50 SYADSVKGRFTISADTSKNTAYLQMNS 76 usage_00565.pdb 50 YYADSVKGRFTISRDNSKNSLYLQMNS 76 S L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################