################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:48 2021 # Report_file: c_0401_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00157.pdb # 4: usage_00190.pdb # 5: usage_00233.pdb # # Length: 84 # Identity: 7/ 84 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 84 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 84 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --QVEQSPASLVLQEGENAELQCTYST--TLNSMQWFYQRPGGRLVSL---LYSPSWAEQ 53 usage_00007.pdb 1 --QVEQSPASLVLQEGENAELQCTYST--TLNSMQWFYQRPGGRLVSL---LYSPSWAEQ 53 usage_00157.pdb 1 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDS-EDKALMNG--------- 50 usage_00190.pdb 1 --PPTFSPALLVVTEGDNATFTCSFSNTSESFHVVWHRESPSGQTDTL---AAFP--EDR 53 usage_00233.pdb 1 --QVEQSPASLVLQEGENAELQCTYST--TLNSMQWFYQRPGGRLVSL---LYSPS--EQ 51 v spaslv EGenA l C s W p L usage_00006.pdb 54 R-G-GRLTSSAASNESRSSLHISS 75 usage_00007.pdb 54 R-G-GRLTSSAASNESRSSLHISS 75 usage_00157.pdb 51 --SESRFFVSSS--QGRSELHI-- 68 usage_00190.pdb 54 PGQDARFRVTQLPNGRDFHMS--- 74 usage_00233.pdb 52 --RGGRLTSSAASNESRSSLHISS 73 R s rs lh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################