################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:03 2021 # Report_file: c_0848_60.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00106.pdb # 2: usage_00107.pdb # 3: usage_00324.pdb # 4: usage_00552.pdb # 5: usage_00670.pdb # # Length: 71 # Identity: 3/ 71 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 71 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 71 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 -DHFALVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQ- 58 usage_00107.pdb 1 --HFALVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQ- 57 usage_00324.pdb 1 -VA-VDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGE 58 usage_00552.pdb 1 -LA-VDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPV- 57 usage_00670.pdb 1 EKA-AEHVERFMELLAICFGNIFTANDPHVVALGGGLSNFE-LIYEEMPKRVPKYLLSV- 57 lg P GGg s k usage_00106.pdb 59 -VRNSTKIKL- 67 usage_00107.pdb 58 -VRNSTKIKL- 66 usage_00324.pdb 59 WRP--HAQVL- 66 usage_00552.pdb 58 -YHQDLKLVE- 66 usage_00670.pdb 58 -AK--CPKIIK 65 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################