################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:14 2021 # Report_file: c_1140_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00080.pdb # 2: usage_00081.pdb # 3: usage_00407.pdb # 4: usage_00408.pdb # 5: usage_00409.pdb # 6: usage_00410.pdb # # Length: 84 # Identity: 71/ 84 ( 84.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 84 ( 86.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 84 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 WVA-LMRAIRDHRDEAAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHL 59 usage_00081.pdb 1 DWVALMRAIRDHRDEAAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHL 60 usage_00407.pdb 1 -WV-ALRAIRDHRDEAAFAELFQHFAPKVKGFL-KSGSVASQAEECAQDV-ATVWQKAHL 56 usage_00408.pdb 1 DWV-ALRAIRDHRDEAAFAELFQHFAPKVKGFL-KSGSVASQAEECAQDV-ATVWQKAHL 57 usage_00409.pdb 1 DWV-ALRAIRDHRDEAAFAELFQHFAPKVKGFL-KSGSVASQAEECAQDV-ATVWQKAHL 57 usage_00410.pdb 1 -WV-ALRAIRDHRDEAAFAELFQHFAPKVKGFL-KSGSVASQAEECAQDV-ATVWQKAHL 56 wv RAIRDHRDEAAFAELFQHFAPKVKGFL KSGSVASQAEECAQDV ATVWQKAHL usage_00080.pdb 60 FDPSRASVATWIFTIARNR----- 78 usage_00081.pdb 61 FDPSRASVATWIFTIARNRRIDGL 84 usage_00407.pdb 57 FDPSRASVATWIFTIARNR----- 75 usage_00408.pdb 58 FDPSRASVATWIFTIARNR----- 76 usage_00409.pdb 58 FDPSRASVATWIFTIARNR----- 76 usage_00410.pdb 57 FDPSRASVATWIFTIARNR----- 75 FDPSRASVATWIFTIARNR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################