################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:28 2021 # Report_file: c_1440_45.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00174.pdb # 2: usage_00572.pdb # 3: usage_00573.pdb # 4: usage_00574.pdb # 5: usage_00941.pdb # 6: usage_00942.pdb # # Length: 66 # Identity: 4/ 66 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 66 ( 43.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 66 ( 56.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 TLEAQVVDLS-DAIAYAAHDLDDGFRAGL-----------LHPEELKE------VELLQA 42 usage_00572.pdb 1 -----------LPRIDTAAAMLMAG---FTTKDAFFTDLAYAPPFA--PVWDPLIVLARV 44 usage_00573.pdb 1 -----------LPRIDTAAAMLMAG---FTTKDAFFTDLAYAPPFA--PVWDPLIVLARV 44 usage_00574.pdb 1 -----------LPRIDTAAAMLMAG---FTTKDAFFTDLAYAPPFA--PVWDPLIVLARV 44 usage_00941.pdb 1 ----------ILPRIDTAAAMLMAG---FTTKDAFFTDLAYAPPFA--PVWDPLIVLARV 45 usage_00942.pdb 1 ----------ILPRIDTAAAMLMAG---FTTKDAFFTDLAYAPPFA--PVWDPLIVLARV 45 lpridtAaamlmag f yaPpfa ivLarv usage_00174.pdb 43 LALEEG 48 usage_00572.pdb 45 LKEG-- 48 usage_00573.pdb 45 LKEG-- 48 usage_00574.pdb 45 LKEG-- 48 usage_00941.pdb 46 LK---- 47 usage_00942.pdb 46 LK---- 47 Lk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################