################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:56 2021 # Report_file: c_0080_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00027.pdb # # Length: 183 # Identity: 164/183 ( 89.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 175/183 ( 95.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/183 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --------PRLFEHLRNKLGFGIEFIHDVHERVTPVTAIQLAKTLEPYQLFYLEDPVAPE 52 usage_00003.pdb 1 PEAYAKSVPRLFEHLRNKLGFGIEFIHDVHERVTPVTAIQLAKTLEPYQLFYLEDPVAPE 60 usage_00004.pdb 1 -EAYAKSVPRLFEHLRNKLGFGIEFIHDVHERVTPVTAIQLAKTLEPYQLFYLEDPVAPE 59 usage_00005.pdb 1 PEAYAKSVPRLFEHLRNKLGFGIEFIHDVHERVTPVTAIQLAKTLEPYQLFYLEDPVAPE 60 usage_00006.pdb 1 -EAYAKSVPRLFEHLRNKLGFGIEFIHDVHERVTPVTAIQLAKTLEPYQLFYLEDPVAPE 59 usage_00027.pdb 1 -DAYAKSVPRLFDHLRNKLGFGIEFIHDVHERVTPVTAINLAKTLEQYQLFYLEDPVAPE 59 PRLFeHLRNKLGFGIEFIHDVHERVTPVTAIqLAKTLEpYQLFYLEDPVAPE usage_00002.pdb 53 NIDWLRMLRQQSSTPISMGELFVNINEWKPLIDNKLIDYIRCHVSTIGGITPAKKLAVYS 112 usage_00003.pdb 61 NIDWLRMLRQQSSTPISMGELFVNINEWKPLIDNKLIDYIRCHVSTIGGITPAKKLAVYS 120 usage_00004.pdb 60 NIDWLRMLRQQSSTPISMGELFVNINEWKPLIDNKLIDYIRCHVSTIGGITPAKKLAVYS 119 usage_00005.pdb 61 NIDWLRMLRQQSSTPISMGELFVNINEWKPLIDNKLIDYIRCHVSTIGGITPAKKLAVYS 120 usage_00006.pdb 60 NIDWLRMLRQQSSTPISMGELFVNINEWKPLIDNKLIDYIRCHVSTIGGITPAKKLAVYS 119 usage_00027.pdb 60 NIDWLKMLRQQSSTPISMGELFVNVNEWKPLIDNRLIDYIRCHVSTIGGITPARKLAVYS 119 NIDWLrMLRQQSSTPISMGELFVNiNEWKPLIDNkLIDYIRCHVSTIGGITPAkKLAVYS usage_00002.pdb 113 ELNGVRTAWHGPGDISPVGVCANMHLDMSSPNFGIQEYTPMNDALREVFPGCPEIDQGYA 172 usage_00003.pdb 121 ELNGVRTAWHGPGDISPVGVCANMHLDMSSPNFGIQEYTPMNDALREVFPGCPEIDQGYA 180 usage_00004.pdb 120 ELNGVRTAWHGPGDISPVGVCANMHLDMSSPNFGIQEYTPMNDALREVFPGCPEIDQGYA 179 usage_00005.pdb 121 ELNGVRTAWHGPGDISPVGVCANMHLDMSSPNFGIQEYTPMNDALREVFPGCPEIDQGYA 180 usage_00006.pdb 120 ELNGVRTAWHGPGDISPVGVCANMHLDMSSPNFGIQEYTPMNDALREVFPGCPEIDQGYA 179 usage_00027.pdb 120 ELNGVRTAWHGPGDISPVGVCANMHLDLSSPNFGIQEYTPMNDALRDVFPGCPEIDHGYA 179 ELNGVRTAWHGPGDISPVGVCANMHLDmSSPNFGIQEYTPMNDALReVFPGCPEIDqGYA usage_00002.pdb 173 YVN 175 usage_00003.pdb 181 YVN 183 usage_00004.pdb 180 YVN 182 usage_00005.pdb 181 YVN 183 usage_00006.pdb 180 YVN 182 usage_00027.pdb 180 YLN 182 YvN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################