################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:25 2021 # Report_file: c_1186_71.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01218.pdb # 2: usage_01308.pdb # 3: usage_01309.pdb # 4: usage_01310.pdb # 5: usage_01311.pdb # 6: usage_01312.pdb # 7: usage_01313.pdb # 8: usage_01314.pdb # # Length: 46 # Identity: 27/ 46 ( 58.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 46 ( 87.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 46 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01218.pdb 1 GPLCKGDGLYVSCCDIVGFLVGKDGDMQYRGLPRYFNILLRKRTVR 46 usage_01308.pdb 1 -PLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRK---- 41 usage_01309.pdb 1 GPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 46 usage_01310.pdb 1 GPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 46 usage_01311.pdb 1 GPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 46 usage_01312.pdb 1 -PLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLR----- 40 usage_01313.pdb 1 GPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 46 usage_01314.pdb 1 -PLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 45 PLCKGDGLfiSCaDIVGFLfktsGkMalhGLPRYFNvtLR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################