################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:38:22 2021 # Report_file: c_0578_13.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00011.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00091.pdb # 8: usage_00092.pdb # 9: usage_00093.pdb # 10: usage_00107.pdb # 11: usage_00162.pdb # 12: usage_00163.pdb # 13: usage_00227.pdb # 14: usage_00228.pdb # 15: usage_00229.pdb # 16: usage_00230.pdb # # Length: 115 # Identity: 26/115 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/115 ( 28.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/115 ( 35.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ---KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGR--------QKG-HT---E-LY 44 usage_00078.pdb 1 ---LIVAIVRPEKLNEVLKALFQAEVRGLTLSRVQGH----------------------- 34 usage_00079.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT-ERYRG-SE---YT-- 51 usage_00080.pdb 1 --KLIVAIVRPEKLNEVLKALFQAEVRGLTLSRVQGH----------------------- 35 usage_00086.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQK--GQ----------TYT-- 44 usage_00087.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQK--GQ-----------YT-- 43 usage_00091.pdb 1 ---KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR--------------------- 36 usage_00092.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQK--GQ-------TER-YT-- 46 usage_00093.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQ---T-EE------YT-- 46 usage_00107.pdb 1 KFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGE--------------------- 39 usage_00162.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR--------------------- 37 usage_00163.pdb 1 -MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQK---------G-----YT-- 43 usage_00227.pdb 1 ---KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT-ERYRG-SE---YT-- 50 usage_00228.pdb 1 ---KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQ-K-T-ERYRG-SE---YT-- 48 usage_00229.pdb 1 ---KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT-ERYRG-SE---YT-- 50 usage_00230.pdb 1 ---KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT-ERYRG-SE---YT-- 50 i AI rP kl V AL G T s V G usage_00011.pdb 45 RGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFD------ 93 usage_00078.pdb 35 --------LHEKVRLEIGVSEPFVKPTVEAILKAARTGEVGDGKIFVLP------ 75 usage_00079.pdb 52 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGENGDGKIFVSPVDQ--- 97 usage_00080.pdb 36 -------ELHEKVRLEIGVSEPFVKPTVEAILKAARTGEVGDGKIFVLP------ 77 usage_00086.pdb 45 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 90 usage_00087.pdb 44 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 89 usage_00091.pdb 37 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 78 usage_00092.pdb 47 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 92 usage_00093.pdb 47 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 92 usage_00107.pdb 40 ------DKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSD--- 85 usage_00162.pdb 38 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVD---- 82 usage_00163.pdb 44 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 89 usage_00227.pdb 51 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 99 usage_00228.pdb 49 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 90 usage_00229.pdb 51 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 92 usage_00230.pdb 51 ------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 99 K EI V V I ArTGe GDGKIFV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################