################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:13 2021 # Report_file: c_1489_377.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01391.pdb # 2: usage_03238.pdb # 3: usage_04010.pdb # 4: usage_04015.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 66 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 66 ( 65.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01391.pdb 1 ------D-PTTN-AS----------LLTKLQW-------LQDMTTHLILRSFKEFLQSSL 35 usage_03238.pdb 1 ------------S--PQNFNR--SK------M-------EVDFLMRIYEDFLRSDVKELV 31 usage_04010.pdb 1 ------D-PTTNA-SLLTKLQAQNQ------W-------LQDMTTHLILRSFKEFLQSSL 39 usage_04015.pdb 1 VGDGTTSAVVLA-GL----------FLEKAE-SLVDQNIHPTIIIEGFKKAFNKSLELLP 48 d f l usage_01391.pdb 36 RALRQM 41 usage_03238.pdb 32 TS---- 33 usage_04010.pdb 40 RALRQM 45 usage_04015.pdb 49 QL---- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################