################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:52 2021 # Report_file: c_0004_52.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00018.pdb # 2: usage_00020.pdb # 3: usage_00206.pdb # 4: usage_00207.pdb # 5: usage_00288.pdb # 6: usage_00304.pdb # 7: usage_00317.pdb # 8: usage_00319.pdb # # Length: 280 # Identity: 235/280 ( 83.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 239/280 ( 85.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/280 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 QTRVLMLNGEEVE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 56 usage_00020.pdb 1 QTRVLMLNGEEVE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 56 usage_00206.pdb 1 -----------VE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 45 usage_00207.pdb 1 Q--------TRVL-MLNETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 51 usage_00288.pdb 1 ---------EEVE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 47 usage_00304.pdb 1 ---------EEVE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 47 usage_00317.pdb 1 ---------QTRVLML-ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 50 usage_00319.pdb 1 ---------EEVE----ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 47 v ETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV usage_00018.pdb 57 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 116 usage_00020.pdb 57 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 116 usage_00206.pdb 46 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 105 usage_00207.pdb 52 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 111 usage_00288.pdb 48 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 107 usage_00304.pdb 48 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEME--VACLDITPL- 104 usage_00317.pdb 51 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPL- 109 usage_00319.pdb 48 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLS 107 SEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEME VACLDITPL usage_00018.pdb 117 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG 176 usage_00020.pdb 117 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG 176 usage_00206.pdb 106 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG 165 usage_00207.pdb 112 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEML---IIPRSILMTTFESSHYLLCALG 168 usage_00288.pdb 108 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG 167 usage_00304.pdb 105 --G-LSPLCAIGL-TDISARILKLPSFELHKEM-L-GGIIPRSILMTTFESSHYLLCALG 158 usage_00317.pdb 110 --G-LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG 166 usage_00319.pdb 108 -NG-LSPLCAIGLWTDISARILKLPSFELHKEM-L-GGIIPRSILMTTFESSHYLLCALG 163 LSPLCAIGL TDISARILKLPSFEL L IIPRSILMTTFESSHYLLCALG usage_00018.pdb 177 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV 236 usage_00020.pdb 177 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV 236 usage_00206.pdb 166 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV 225 usage_00207.pdb 169 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV 228 usage_00288.pdb 168 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV 227 usage_00304.pdb 159 DGALFYFGLNIETGLLSD-KKVTLGTQPTVLRTFRS-STTNVFACSDRPTVIY-SNHKLV 215 usage_00317.pdb 167 DGALFYFGLNIETGLLSD-KKVTLGTQPTVLRTFRS-STTNVFACSDRPTVIY-SNHKLV 223 usage_00319.pdb 164 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRS-STTNVFACSDRPTVIY-SNHKLV 221 DGALFYFGLNIETGLLSD KKVTLGTQPTVLRTFRS STTNVFACSDRPTVIY SNHKLV usage_00018.pdb 237 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIG----- 271 usage_00020.pdb 237 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDE- 275 usage_00206.pdb 226 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDE- 264 usage_00207.pdb 229 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDE- 267 usage_00288.pdb 228 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDE- 266 usage_00304.pdb 216 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI 255 usage_00317.pdb 224 FSNVNLKEVNYMCPLNSDGYPSLA-LANNSTLTIGTIDE- 261 usage_00319.pdb 222 FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDE- 260 FSNVNLKEVNYMCPLNSDGYPdsl LANNSTLTIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################