################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:19 2021 # Report_file: c_1408_125.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00146.pdb # 2: usage_01301.pdb # 3: usage_01302.pdb # 4: usage_01303.pdb # 5: usage_01304.pdb # 6: usage_01424.pdb # # Length: 57 # Identity: 12/ 57 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 57 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 57 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 RIDAYNHLKTFYNDEKEKKFE---------GSLDESDIFL-TLFLRNKKILKKLAE- 46 usage_01301.pdb 1 MMDAFQCLQQFYAD------------------KDPTERFLATTFEENRATLQALAGD 39 usage_01302.pdb 1 MMDAFQCLQQFYADK------------------DPTERFLATTFEENRATLQALAGD 39 usage_01303.pdb 1 MVDAYNHLNNFYKELKRRKTA----ES---SKQDETDEFLMRLFHAKKKQLKELARK 50 usage_01304.pdb 1 MVDAYNHLNNFYKELKRRKTA----ESPLVSKQDETDEFLMRLFHAKKKQLKELARK 53 usage_01424.pdb 1 MIDAYSHLETFYTDEKEKKFAVLNS-----LKLDETDEFLMNLFFDNKKMLKKLAEN 52 m DA L FY D t FL F L LA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################