################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:42 2021 # Report_file: c_0109_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00022.pdb # 2: usage_00064.pdb # 3: usage_00074.pdb # 4: usage_00092.pdb # 5: usage_00093.pdb # 6: usage_00096.pdb # 7: usage_00122.pdb # 8: usage_00134.pdb # 9: usage_00155.pdb # # Length: 251 # Identity: 157/251 ( 62.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 157/251 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/251 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 ----------------IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEV 44 usage_00064.pdb 1 ----------------IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKAAAV 44 usage_00074.pdb 1 -ARHFAQLLSKMESSLIPAAVFMPW-----LPQSARCREARAELQKILGEIIVAREKEEA 54 usage_00092.pdb 1 ------------------------------LPQSARCHEARTELQKILSEIIIARKAAAV 30 usage_00093.pdb 1 ----------------IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKAAAV 44 usage_00096.pdb 1 ----------------------MPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEA 38 usage_00122.pdb 1 ----------------------MPWLLRLPLPQSARCREARAELQKILGEIIVAREKE-- 36 usage_00134.pdb 1 ----------------IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEV 44 usage_00155.pdb 1 NARHFAQLLSKMESSLIPAAVFM-------LPQSARCREARAELQKILGEIIVAREKE-- 51 LPQSARC EAR ELQKIL EII AR usage_00022.pdb 45 NKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 104 usage_00064.pdb 45 ----STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 100 usage_00074.pdb 55 SKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 114 usage_00092.pdb 31 NKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 90 usage_00093.pdb 45 NKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 104 usage_00096.pdb 39 ------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 92 usage_00122.pdb 37 -----TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 91 usage_00134.pdb 45 NKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 104 usage_00155.pdb 52 ------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 105 SDLL GLL AVYRDGT MSLHEVCGMIVAAMFAGQHTS ITT WSMLHLMHP N usage_00022.pdb 105 VKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSY 164 usage_00064.pdb 101 VKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSY 160 usage_00074.pdb 115 KKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSY 174 usage_00092.pdb 91 VKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSY 150 usage_00093.pdb 105 VKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSY 164 usage_00096.pdb 93 KKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSY 152 usage_00122.pdb 92 KKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSY 151 usage_00134.pdb 105 VKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSY 164 usage_00155.pdb 106 KKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSY 165 K L L KEI EFPAQLNY NVMDEMPFAERC RESIRRDPPLLM MR V A VKVGSY usage_00022.pdb 165 VVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAGVHKCIGQKFGLLQV 224 usage_00064.pdb 161 VVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAGVHKCIGQKFGLLQV 220 usage_00074.pdb 175 VVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGF----------------- 217 usage_00092.pdb 151 VVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAGVHKCIGQKFGLLQV 210 usage_00093.pdb 165 VVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAGVHKCIGQKFGLLQV 224 usage_00096.pdb 153 VVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQV 212 usage_00122.pdb 152 VVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQV 211 usage_00134.pdb 165 VVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAGVHKCIGQKFGLLQV 224 usage_00155.pdb 166 VVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQV 225 VVPKGDIIACSPLLSHHDEEAFP PR WDPERDEKV GAFIGF usage_00022.pdb 225 KTILATAFRS- 234 usage_00064.pdb 221 KTILATAFRSY 231 usage_00074.pdb ----------- usage_00092.pdb 211 KTILATAFRSY 221 usage_00093.pdb 225 KTILATAFRS- 234 usage_00096.pdb 213 KTILATAFREY 223 usage_00122.pdb 212 KTILATAFRE- 221 usage_00134.pdb 225 KTILATAFRS- 234 usage_00155.pdb 226 KTILATAFREY 236 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################