################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:14 2021 # Report_file: c_1387_67.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00579.pdb # 2: usage_00580.pdb # 3: usage_00581.pdb # 4: usage_00585.pdb # 5: usage_00586.pdb # 6: usage_00587.pdb # 7: usage_00588.pdb # 8: usage_00589.pdb # 9: usage_00590.pdb # 10: usage_00591.pdb # 11: usage_00597.pdb # 12: usage_02330.pdb # 13: usage_02331.pdb # # Length: 66 # Identity: 45/ 66 ( 68.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 66 ( 68.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 66 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00579.pdb 1 HPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 60 usage_00580.pdb 1 ---SGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 57 usage_00581.pdb 1 ---SGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 57 usage_00585.pdb 1 ---SGCRTVLRLHRALHWLQLFLDGLRTSSEDARTSTLCSEAYNATLANYHSWIVRQAVT 57 usage_00586.pdb 1 ---SGCRTVLRLHRALHWLQLFLDGLRTSSEDARTSTLCSEAYNATLANYHSWIVRQAVT 57 usage_00587.pdb 1 ---SGCRTVLRLHRALHWLQLFLDGLRTSS----TSTLCSEAYNATLANYHSWIVRQAVT 53 usage_00588.pdb 1 ---SGCRTVLRLHRALHWLQLFLDGLRTSSEDARTSTLCSEAYNATLANYHSWIVRQAVT 57 usage_00589.pdb 1 HPHSGCRTVLRLHRALHWLQLFLDGLRTSSE--RTSTLCSEAYNATLANYHSWIVRQAVT 58 usage_00590.pdb 1 ---SGCRTVLRLHRALHWLQLFLDGLRTSSEDARTSTLCSEAYNATLANYHSWIVRQAVT 57 usage_00591.pdb 1 HPHSGCRTVLRLHRALHWLQLFLDGLRTSSE--RTSTLCSEAYNATLANYHSWIVRQAVT 58 usage_00597.pdb 1 HPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 60 usage_02330.pdb 1 ---SGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 57 usage_02331.pdb 1 HPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVT 60 SGCRTVLRLHRALHWLQLFL GLRTS TS LC YNA LA YH W VR AVT usage_00579.pdb 61 VAFC-- 64 usage_00580.pdb 58 VAFC-- 61 usage_00581.pdb 58 VAFCTL 63 usage_00585.pdb 58 VAFCAL 63 usage_00586.pdb 58 VAF--- 60 usage_00587.pdb 54 VAF--- 56 usage_00588.pdb 58 VAF--- 60 usage_00589.pdb 59 VAF--- 61 usage_00590.pdb 58 VAF--- 60 usage_00591.pdb 59 VAF--- 61 usage_00597.pdb 61 VAFCTL 66 usage_02330.pdb 58 VAF--- 60 usage_02331.pdb 61 VAFCTL 66 VAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################