################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:49 2021 # Report_file: c_1035_5.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00202.pdb # 4: usage_00203.pdb # 5: usage_00204.pdb # 6: usage_00205.pdb # 7: usage_00206.pdb # 8: usage_00207.pdb # 9: usage_00208.pdb # 10: usage_00209.pdb # 11: usage_00210.pdb # 12: usage_00211.pdb # 13: usage_00261.pdb # 14: usage_00262.pdb # 15: usage_00263.pdb # # Length: 58 # Identity: 43/ 58 ( 74.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 58 ( 74.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 58 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 PVFVVQWLFDEAQLTVDNVH---L---PVQEGLRLYIQNLGRELRHTLKDVPASFAPA 52 usage_00010.pdb 1 PVFVVQWLFDEAQLTVDNVH---LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPA 55 usage_00202.pdb 1 -VFVVQWLFDEAQLTVDNVH---V-----QEGLRLYIQNLGRELRHTLKDVPASFAPA 49 usage_00203.pdb 1 PVFVVQWLFDEAQLTVDNVH---L-----QEGLRLYIQNLGRELRHTLKDVPASFAPA 50 usage_00204.pdb 1 PVFVVQWLFDEAQLTVDNVH---L----VQEGLRLYIQNLGRELRHTLKDVPASFAPA 51 usage_00205.pdb 1 -VFVVQWLFDEAQLTVDNV--------------RLYIQNLGRELRHTLKDVPASFAPA 43 usage_00206.pdb 1 PVFVVQWLFDEAQLTVDNVH---LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPA 55 usage_00207.pdb 1 PVFVVQWLFDEAQLTVDNVH--PV-----QEGLRLYIQNLGRELRHTLKDVPASFAPA 51 usage_00208.pdb 1 PVFVVQWLFDEAQLTVDNVH---LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPA 55 usage_00209.pdb 1 PVFVVQWLFDEAQLTVDNVHGQ-----PVQEGLRLYIQNLGRELRHTLKDVPASFAPA 53 usage_00210.pdb 1 PVFVVQWLFDEAQLTVDNVH---LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPA 55 usage_00211.pdb 1 PVFVVQWLFDEAQLTVDNVH---LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPA 55 usage_00261.pdb 1 PVFVVQWLFDEAQLTVDNVH---L---PVQEGLRLYIQNLGRELRHTLKDVPASFAPA 52 usage_00262.pdb 1 PVFVVQWLFDEAQLTVDNVH---L---------RLYIQNLGRELRHTLKDVPASFAPA 46 usage_00263.pdb 1 PVFVVQWLFDEAQLTVDNVH---L-----QEGLRLYIQNLGRELRHTLKDVPASFAPA 50 VFVVQWLFDEAQLTVDNV RLYIQNLGRELRHTLKDVPASFAPA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################