################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:07 2021 # Report_file: c_0212_16.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00130.pdb # 2: usage_00201.pdb # 3: usage_00217.pdb # 4: usage_00239.pdb # 5: usage_00240.pdb # 6: usage_00244.pdb # 7: usage_00280.pdb # 8: usage_00281.pdb # 9: usage_00284.pdb # 10: usage_00343.pdb # 11: usage_00375.pdb # 12: usage_00381.pdb # 13: usage_00382.pdb # 14: usage_00396.pdb # # Length: 111 # Identity: 38/111 ( 34.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/111 ( 50.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/111 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00130.pdb 1 ---LQESGPGLVKPSQTLSLTCTVSGGSI-T-TRYYAWSWIRQPPGKGLEWMGVIDY-DG 54 usage_00201.pdb 1 --QLQESGPGLVKPSETLSVTCIVSGGSI-S-N--YYWTWIRQSPGKGLEWIGYISD-RE 53 usage_00217.pdb 1 QVQLQESGPGLVKPSETLSLICTVSGGSISSSS--YYWGWIRQTPERNLEWIGIIYF-SG 57 usage_00239.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGGSI-S-S--YYWSWIRQPPGKGLEWIGYIYY-SG 54 usage_00240.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGGSI-S-S--YYWSWIRQPPGKGLEWIGYIYY-SG 54 usage_00244.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGGSI-S-G--FHWSWIRQPPGKGLEYIGYIYY-SG 54 usage_00280.pdb 1 -VQLVESGPGLVKPLETLSLTCAVPGGSI-R-R--NYWSWIRQPPGKGLEWIGHSYGSGG 55 usage_00281.pdb 1 --QLVESGPGLVKPLETLSLTCAVPGGSI-R-R--NYWSWIRQPPGKGLEWIGHSYG-SG 53 usage_00284.pdb 1 --QLQESGPGLVKPAETLSLTCSVSGESI-N-TGHYYWGWVRQVPGKGLEWIGHIHY-TT 55 usage_00343.pdb 1 --QLQESGPGLVKPSETLSVTCSVSGDSM-N-N--YYWTWIRQSPGKGLEWIGYISD-RE 53 usage_00375.pdb 1 QVQLQESGPGLVKPSETLSVTCAVSGVSF-S-S--FWWGWIRQSPGKGLEWIGTIYGSSG 56 usage_00381.pdb 1 ---LQESGPGLVRPSETLSVTCIVSGGSI-S-N--YYWTWIRQSPGKGLEWIGYISD-RE 52 usage_00382.pdb 1 ---LQESGPGLVRPSETLSVTCIVSGGSI-S-N--YYWTWIRQSPGKGLEWIGYISD-RE 52 usage_00396.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S-S--YYWSWIRQPPGKGLEWIGYIYY-SG 53 L ESGPGLV P eTLS tC V G S W WiRQ PgkgLEwiG usage_00130.pdb 55 -DTYYSPSLKSRTSISWDTSKNQFSLQLSSVTPEDTAVYYCARDPD----- 99 usage_00201.pdb 54 -TTTYNPSLKSRVVISRDTSKNQLSLKLNSVTAADTAIYYCATARRGQRIY 103 usage_00217.pdb 58 -TTYYNPSLQSRVSMSLDRSTNRFSLRLSSVTAADTAIYYCA--------- 98 usage_00239.pdb 55 -STNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASLP------ 98 usage_00240.pdb 55 -STNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASLP------ 98 usage_00244.pdb 55 -STSYNPSLKSRVSMSVDTSRNQFSLELSSVTAADTAVYYCARDFG----- 99 usage_00280.pdb 56 -STNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTVWY---- 101 usage_00281.pdb 54 GSTNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTVWY---- 100 usage_00284.pdb 56 -AVLHNPSLKSRLTIKIYTLRNQITLRLSNVTAADTAVYHCV--------- 96 usage_00343.pdb 54 -SATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIY 103 usage_00375.pdb 57 -RGEYNPSLKSRTTISRDTSKSQISLELTSVTAADTAIYYCSRGLFQP--- 103 usage_00381.pdb 53 -TTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIY 102 usage_00382.pdb 53 -TTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIY 102 usage_00396.pdb 54 -STNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTQQGKRIY 103 ynPSL SR s dts n sL L sVT aDTA Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################