################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:10 2021 # Report_file: c_0951_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00006.pdb # 2: usage_00024.pdb # 3: usage_00031.pdb # 4: usage_00094.pdb # 5: usage_00129.pdb # 6: usage_00131.pdb # 7: usage_00416.pdb # 8: usage_00582.pdb # 9: usage_00624.pdb # 10: usage_00625.pdb # # Length: 66 # Identity: 1/ 66 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 66 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 66 ( 80.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----L-VFKFEKVSHS----NIHVYKLLYCQH-- 48 usage_00024.pdb 1 -WSVVEDLPEGPAVKIGE-----NKDAM--DGWFRLERV--S----EFNNYKLVFCP--- 43 usage_00031.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----L-VFKFEKVSHS----NIHVYKLLYCQH-- 48 usage_00094.pdb 1 --------------------------------VFKFEKVSHS----NIHVYKLLYCQHDE 24 usage_00129.pdb 1 ---TVVDSPQGPAVKLSQQKLPEKDI----L-VFKFEKVSHS----NIHVYKLLYCQH-- 46 usage_00131.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----L-VFKFEKVSHS----NIHVYKLLYCQH-- 48 usage_00416.pdb 1 --AVIVADGPNLREV--P-DLSPEKL--SQK--DVLIADRN-EKGQRTGTYTN------- 43 usage_00582.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----L-VFKFEKVSHS----NIHVYKLLYCQH-- 48 usage_00624.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----Y-VFKFEKVSHS----NIHVYKLLYCQ--- 47 usage_00625.pdb 1 W-WTVVDSPQGPAVKLSQQKLPEKDI----Y-VFKFEKVSHS----NIHVYKLLYC---- 46 f e v Ykl usage_00006.pdb ------ usage_00024.pdb ------ usage_00031.pdb ------ usage_00094.pdb 25 EDVKCD 30 usage_00129.pdb ------ usage_00131.pdb ------ usage_00416.pdb ------ usage_00582.pdb ------ usage_00624.pdb ------ usage_00625.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################