################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:54 2021 # Report_file: c_0028_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00040.pdb # 3: usage_00075.pdb # 4: usage_00109.pdb # 5: usage_00114.pdb # 6: usage_00138.pdb # 7: usage_00139.pdb # # Length: 199 # Identity: 13/199 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/199 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/199 ( 19.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP----ASQIGP-GYLPTS 55 usage_00040.pdb 1 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA-HTAEVNC 59 usage_00075.pdb 1 KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVNC 59 usage_00109.pdb 1 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA-HTAEVNC 59 usage_00114.pdb 1 VTEHALHQHTISTLHWSPRVKDLIVSGDEKGVVFCYWFNRND----SQHLFI-EPRTIFC 55 usage_00138.pdb 1 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA-HTAEVNC 59 usage_00139.pdb 1 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA-HTAEVNC 59 H a v v w slf S d wdtr n c usage_00016.pdb 56 LAWHPQQSEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHS-V------P 107 usage_00040.pdb 60 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-E------T 112 usage_00075.pdb 60 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-E------T 112 usage_00109.pdb 60 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-E------T 112 usage_00114.pdb 56 LTCSPHHEDLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSIGC 115 usage_00138.pdb 60 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-E------T 112 usage_00139.pdb 60 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-E------T 112 L P e a G d tV l D hs H dei wsPh e usage_00016.pdb 108 FLASLSEDCSLAVLDS--S--------------LSELFRSQA-HR---DFVRDATWSPLN 147 usage_00040.pdb 113 ILASSGTDRRLNVWDLSKIG-----------PP-ELLFIHGG-HT---AKISDFSWNPNE 156 usage_00075.pdb 113 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP-ELLFIHGG-HT---AKISDFSWNPNE 167 usage_00109.pdb 113 ILASSGTDRRLNVWDLSKIGEE-----AEDGPP-ELLFIHGG-HT---AKISDFSWNPNE 162 usage_00114.pdb 116 YLATGSKDQTIRIWSCSRG---------------RGVMILKLPF-KERLW-LTLHWPSNQ 158 usage_00138.pdb 113 ILASSGTDRRLNVWDLSKIGEEQS---E-DGPP-ELLFIHGG-HT---AKISDFSWNPNE 163 usage_00139.pdb 113 ILASSGTDRRLNVWDLSKIGE--------DGPP-ELLFIHGG-HT---AKISDFSWNPNE 159 LAs D l vwd lfi h d W pn usage_00016.pdb 148 HSLLTTVGWDHQVVHHVVP 166 usage_00040.pdb 157 PWVICSVSEDNIMQVWQMA 175 usage_00075.pdb 168 PWIICSVSEDNIMQVWQMA 186 usage_00109.pdb 163 PWVICSVSEDNIMQVWQMA 181 usage_00114.pdb 159 PTQLVSSCFGGELLQWDLT 177 usage_00138.pdb 164 PWVICSVSEDNIMQVWQMA 182 usage_00139.pdb 160 PWVICSVSEDNIMQVWQMA 178 p sv d w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################