################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:54 2021 # Report_file: c_0711_37.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00052.pdb # 3: usage_00057.pdb # 4: usage_00154.pdb # 5: usage_00174.pdb # 6: usage_00237.pdb # 7: usage_00238.pdb # 8: usage_00251.pdb # 9: usage_00252.pdb # 10: usage_00253.pdb # 11: usage_00303.pdb # 12: usage_00309.pdb # 13: usage_00380.pdb # # Length: 63 # Identity: 22/ 63 ( 34.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 63 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 63 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----VYQFKGLCY-FTNGTERVRGVTRHIYNREEYVRFDSDVGVYRAVTPQGRPVAEYWN 55 usage_00052.pdb 1 RPRFLEQVKHECH-FFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPDAEYWN 59 usage_00057.pdb 1 -PRFLEQVKHECH-FFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPDAEYWN 58 usage_00154.pdb 1 --SFVHQFQPFCY-FTNGTQRIRLVIRYIYNREEYVRFDSDVGEYRAVTELGRPDAEYWN 57 usage_00174.pdb 1 --SFVHQFQPFCY-FTNGTQRIRLVIRYIYNREEYVRFDSDVGEYRAVTELGRPDAEYWN 57 usage_00237.pdb 1 --ENYLFQGRQECYAFN--GTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEEYWN 56 usage_00238.pdb 1 ----L-FQGRQECYAFN--GTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEEYWN 53 usage_00251.pdb 1 ERHFVHQFKGECY-FTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYN 59 usage_00252.pdb 1 ERHFVHQFKGECY-FTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYN 59 usage_00253.pdb 1 ERHFVHQFKGECY-FTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYN 59 usage_00303.pdb 1 -RHFVYQFMGECY-FTNGTQRIRYVTRYIYNREEYVRYDSDVGEHRAVTELGRPDAEYWN 58 usage_00309.pdb 1 -RHFVHQFKGECY-FTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYN 58 usage_00380.pdb 1 -RHFVHQFKGECY-FTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYN 58 N R Ry Y EE RfDSDVGe RAVTelGR EY N usage_00001.pdb 56 SQ- 57 usage_00052.pdb 60 SQ- 61 usage_00057.pdb 59 SQ- 60 usage_00154.pdb 58 KQY 60 usage_00174.pdb 58 KQY 60 usage_00237.pdb 57 SQK 59 usage_00238.pdb 54 SQK 56 usage_00251.pdb 60 KQ- 61 usage_00252.pdb 60 KQ- 61 usage_00253.pdb 60 KQ- 61 usage_00303.pdb 59 SQ- 60 usage_00309.pdb 59 KQ- 60 usage_00380.pdb 59 KQY 61 Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################