################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:39 2021 # Report_file: c_0034_8.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00053.pdb # 5: usage_00054.pdb # 6: usage_00055.pdb # 7: usage_00058.pdb # 8: usage_00059.pdb # 9: usage_00060.pdb # 10: usage_00177.pdb # 11: usage_00180.pdb # 12: usage_00181.pdb # 13: usage_00182.pdb # 14: usage_00184.pdb # 15: usage_00185.pdb # # Length: 262 # Identity: 64/262 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 169/262 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/262 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-LEAGVQCKAALHEQFEPQKTLFIQCD 59 usage_00049.pdb 1 KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 59 usage_00050.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00053.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00054.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00055.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00058.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00059.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00060.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00177.pdb 1 KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 59 usage_00180.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00181.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00182.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYLNAD 58 usage_00184.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGAD 59 usage_00185.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGAD 59 AvVTGstsGIGl At La GAd v ngfg ie r L gv K y aD usage_00048.pdb 60 VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK--------NWEKTLQINLVSVISGTY 111 usage_00049.pdb 60 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 119 usage_00050.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00053.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00054.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00055.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00058.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00059.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00060.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00177.pdb 60 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 119 usage_00180.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00181.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00182.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00184.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 119 usage_00185.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 119 ls a R a G DILVNNAGiqhta kW ai alNLsaVfhGTa usage_00048.pdb 112 LGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGV 171 usage_00049.pdb 120 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 174 usage_00050.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00053.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00054.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00055.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00058.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00059.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00060.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00177.pdb 120 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 174 usage_00180.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00181.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00182.pdb 119 AALPIMQ---KQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA--GKGI 173 usage_00184.pdb 120 AALPHMK---KQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA--GQGI 174 usage_00185.pdb 120 AALPHMK---KQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA--GQGI 174 aaLp M kqg GrIINiaSahGLvas nksaYvAaKHGvVG TkvtALe a g Gi usage_00048.pdb 172 RLNAICPGFVNTAILESIE-KEEN----MGQYIEYKDHIKDMI-----KYYGILDPPLIA 221 usage_00049.pdb 175 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 228 usage_00050.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00053.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00054.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00055.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00058.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00059.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00060.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00177.pdb 175 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 228 usage_00180.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00181.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00182.pdb 174 TCNAICPGWVRTPLVEKQIEA---ISQQKGI--DIEAAARELLAEKQPS-LQFVTPEQLG 227 usage_00184.pdb 175 TANAICPGWVRTPLVEKQISA---LAEKNGV--DQETAARELLSEKQPS-LQFVTPEQLG 228 usage_00185.pdb 175 TANAICPGWVRTPLVEKQISA---LAEKNGV--DQETAARELLSEKQPS-LQFVTPEQLG 228 t NAICPGwVrTplvEkqi a G d e aarell s lqfvtPeqlg usage_00048.pdb 222 NGLITLIEDDAL--NGAIMKIT 241 usage_00049.pdb 229 GAAVFLSSAAADQMTGTTLSL- 249 usage_00050.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00053.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00054.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00055.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00058.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00059.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00060.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00177.pdb 229 GAAVFLSSAAADQMTGTTLSL- 249 usage_00180.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00181.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00182.pdb 228 GAAVFLSSAAADQMTGTTLSL- 248 usage_00184.pdb 229 GTAVFLASDAAAQITGTTVSV- 249 usage_00185.pdb 229 GTAVFLASDAAAQITGTTVSV- 249 g avfL s aA tGtt s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################