################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:56 2021 # Report_file: c_1172_535.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00662.pdb # 2: usage_00663.pdb # 3: usage_00665.pdb # 4: usage_00666.pdb # 5: usage_01696.pdb # 6: usage_03556.pdb # 7: usage_03557.pdb # 8: usage_03558.pdb # 9: usage_03560.pdb # 10: usage_03561.pdb # 11: usage_04377.pdb # # Length: 25 # Identity: 13/ 25 ( 52.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 25 ( 52.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 25 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00662.pdb 1 LDLVSPPEGAPLVSAVGDLVGFVHD 25 usage_00663.pdb 1 LDLVSPPEGAPLVSAVGDLVGFVHD 25 usage_00665.pdb 1 LDLVSPPEGAPLVSAVGDLVGFVHD 25 usage_00666.pdb 1 LDLVSPPEGAPLVSAVGDLVGFVHD 25 usage_01696.pdb 1 -DLISPPSGAPLISALGDLGGFTHA 24 usage_03556.pdb 1 LDVVSPPVGAPVYSALGDIGGFRHD 25 usage_03557.pdb 1 -DVVSPPVGAPVYSALGDIGGFRHD 24 usage_03558.pdb 1 LDVVSPPVGAPVYSALGDIGGFRHD 25 usage_03560.pdb 1 LDVVSPPVGAPVYSALGAIGGFRHD 25 usage_03561.pdb 1 LDVVSPPVGAPVYSALGAIGGFRHD 25 usage_04377.pdb 1 NDLASPPSGAPLLSALGDIGGFRHT 25 D SPP GAP SA G GF H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################