################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:32 2021 # Report_file: c_1488_566.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00084.pdb # 2: usage_00106.pdb # 3: usage_00307.pdb # 4: usage_00388.pdb # 5: usage_02482.pdb # 6: usage_03587.pdb # 7: usage_03588.pdb # 8: usage_03889.pdb # 9: usage_03891.pdb # 10: usage_05677.pdb # 11: usage_05678.pdb # 12: usage_05679.pdb # 13: usage_07488.pdb # 14: usage_08224.pdb # # Length: 17 # Identity: 0/ 17 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 17 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 17 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 TSEQEKTFDQT--IAAR 15 usage_00106.pdb 1 TSEQEKTFDQT--IAAR 15 usage_00307.pdb 1 PKDAERLAELI--IQNQ 15 usage_00388.pdb 1 --AKFYMDHML--DR-- 11 usage_02482.pdb 1 --DPGQLLRNH--LNQV 13 usage_03587.pdb 1 QQFRLMEADLHNL---- 13 usage_03588.pdb 1 QQFRLMEADLHNL---- 13 usage_03889.pdb 1 TEKGAQVVAAN--IRAM 15 usage_03891.pdb 1 TEKGAQVVAAN--IRAM 15 usage_05677.pdb 1 PPEQERVLRDH--IRDA 15 usage_05678.pdb 1 PPEQERVLRDH--IRDA 15 usage_05679.pdb 1 PPEQERVLRDH--IRDA 15 usage_07488.pdb 1 DEQLKESIRDA------ 11 usage_08224.pdb 1 ECDMESIIRSE--LMDA 15 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################