################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:31 2021 # Report_file: c_0932_94.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00182.pdb # 2: usage_00208.pdb # 3: usage_00304.pdb # 4: usage_00305.pdb # 5: usage_00441.pdb # 6: usage_00450.pdb # 7: usage_00557.pdb # 8: usage_00790.pdb # 9: usage_01440.pdb # 10: usage_01601.pdb # 11: usage_01642.pdb # 12: usage_01709.pdb # 13: usage_01851.pdb # 14: usage_01870.pdb # 15: usage_02074.pdb # 16: usage_02171.pdb # 17: usage_02259.pdb # 18: usage_02275.pdb # 19: usage_02290.pdb # 20: usage_02295.pdb # # Length: 55 # Identity: 14/ 55 ( 25.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 55 ( 67.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 55 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_00208.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSS----QTYTCNVNHKPSNTKVDKRVEP- 44 usage_00304.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_00305.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_00441.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKRVEP- 47 usage_00450.pdb 1 GVHTFPAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 52 usage_00557.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TKTYTCNVDHKPSNTKVDKRVHH- 47 usage_00790.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_01440.pdb 1 -----PPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHY-TNPSQDVTVPCP 49 usage_01601.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_01642.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKRVEP- 47 usage_01709.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_01851.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKRVEP- 47 usage_01870.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02074.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02171.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02259.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02275.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02290.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKKVEP- 47 usage_02295.pdb 1 -----PAV-LQSSGLYSLSSVVTVPSSSLG-TQTYICNVNHKPSNTKVDKRVEP- 47 Pav lqSsgLYslSSvvTvPsss ty CnV Hk sNtkvDk V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################