################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:51 2021 # Report_file: c_1108_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00059.pdb # 2: usage_00181.pdb # 3: usage_00182.pdb # 4: usage_00278.pdb # 5: usage_00427.pdb # 6: usage_00428.pdb # 7: usage_00429.pdb # 8: usage_00430.pdb # # Length: 114 # Identity: 51/114 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/114 ( 46.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/114 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 -HDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTI-P----HKVNPIDFENSEGN 54 usage_00181.pdb 1 -YDNLAAICDACARLHTILMDLAKDVWQYISLGYFDQKVR---EVG--VNPIDFENAEGN 54 usage_00182.pdb 1 -YDNLAAICDACARLHTILMDLAKDVWQYISLGYFDQKVR---EVG--VNPIDFENAEGN 54 usage_00278.pdb 1 YIAELFD---CIARFNTILIDFDRDVWGYIALNHFKQ-----------VNPIDFENSEGN 46 usage_00427.pdb 1 --DYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKT-MP----HKVNPIDFENSEGN 53 usage_00428.pdb 1 --DYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKTI--AG--HKVNPIDFENSEGN 54 usage_00429.pdb 1 --DYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKT--P----HKVNPIDFENSEGN 52 usage_00430.pdb 1 --DYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKM--P----HKVNPIDFENSEGN 52 d a AR TIL D DVW YI L F Q VNPIDFEN EGN usage_00059.pdb 55 LGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKL 108 usage_00181.pdb 55 LGMSNAVLGFLSAKLPISRLQRDLTDSTVLRNLGVPLSHALIAFASLRRGIDKL 108 usage_00182.pdb 55 LGMSNAVLGFLSAKLPISRLQRDLTDSTVLRNLGVPLSHALIAFASLRRGIDKL 108 usage_00278.pdb 47 LGLSNAVLHHLANK--L-------TDSTVLRNLGVGIGYALIAYQSTLKGVS-- 89 usage_00427.pdb 54 LGLSNAVLHHLANKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKL 107 usage_00428.pdb 55 LGLSNAVLHHLANKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKL 108 usage_00429.pdb 53 LGLSNAVLHHLANKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKL 106 usage_00430.pdb 53 LGLSNAVLHHLANKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKL 106 LG SNAVL L K TDSTVLRNLGV ALIA S G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################