################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:44 2021 # Report_file: c_0863_165.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00094.pdb # 2: usage_00095.pdb # 3: usage_00220.pdb # 4: usage_00221.pdb # 5: usage_00222.pdb # 6: usage_00973.pdb # 7: usage_01087.pdb # 8: usage_01138.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 76 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 76 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 -SIGGLT----NRLLEVLRPFG----D----R-------P-LA-LFGHSGAIIGYELALR 38 usage_00095.pdb 1 ----DYS----RLHQAVLNELF-SIP-YVDHH-------R-VGLIGFRFGGNAMVRLSFL 42 usage_00220.pdb 1 T-FRDYS----EPLMEVMASIP---PD----E-------K-VVLLGHSFGGMSLGLAMET 40 usage_00221.pdb 1 T-FRDYS----EPLMEVMASIP---PD----E-------K-VVLLGHSFGGMSLGLAMET 40 usage_00222.pdb 1 --FRDYS----EPLMEVMASIP---PD----E-------K-VVLLGHSFGGMSLGLAMET 39 usage_00973.pdb 1 ---QQEQ----EQLAAYLTDF----------E-------R-IAVLADNNLGSSWIRLEDR 35 usage_01087.pdb 1 -------NYYRALSQELPQVLAAFFPN-----MTQKRE-K-TFVAGLSMGGYGAFKWALK 46 usage_01138.pdb 1 -SPQLNS----ETLAPVLREL----------A------PGAEFVVGMSLGGLTAIRLAAM 39 gg usage_00094.pdb 39 PEAGLP-APVHLFASG 53 usage_00095.pdb 43 E---Q-EKIKACVILG 54 usage_00220.pdb 41 Y---P-EKISVAVFMS 52 usage_00221.pdb 41 Y---P-EKISVAVFMS 52 usage_00222.pdb 40 Y---P-EKISVAVFMS 51 usage_00973.pdb 36 F---P-KQVVAAQEYN 47 usage_01087.pdb 47 S---N--RFSYAASFS 57 usage_01138.pdb 40 A---P-DLVGELVLVD 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################