################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1459_216.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00033.pdb # 2: usage_00271.pdb # 3: usage_00272.pdb # 4: usage_00429.pdb # 5: usage_00935.pdb # 6: usage_01971.pdb # 7: usage_02069.pdb # 8: usage_02094.pdb # 9: usage_02120.pdb # 10: usage_02342.pdb # 11: usage_02460.pdb # 12: usage_02767.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 43 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 43 ( 53.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 ---MRLWS--AK----APN---GYIQAVLDRNLAENISR---- 27 usage_00271.pdb 1 ---GFERI--NL----A----APSSVIQESLERLNKAL-KDL- 28 usage_00272.pdb 1 ---GFERI--NL----A----APSSVIQESLERLNKAL-KDLK 29 usage_00429.pdb 1 ---GFLRA--TV----S----RPSAVLNEAVDRI--------- 21 usage_00935.pdb 1 ---GAQQV--SL----QANGCVYHGTIIHELMHAIG------- 27 usage_01971.pdb 1 GISPNYIN--AHGKPQS----ISAETKRRLLDAM--------- 28 usage_02069.pdb 1 ---GYVRL--GF----A----CEQETLIKGLEKLSQFL-RRFD 29 usage_02094.pdb 1 ---GYQRI--NL----A----CPRSMLEEALIRIKNAI----- 25 usage_02120.pdb 1 ---GYQRI--NL----A----CPRSMLEEALIRIKNA------ 24 usage_02342.pdb 1 ---FLEYK--TC----V----GDLTVVIAKALDEFK------- 23 usage_02460.pdb 1 ---SVLIAGPCV----I----ESLENLRSIATKLQ-------- 24 usage_02767.pdb 1 ---GYVRL--GF----A----CEQETLIKGLEKLSQFL-R--- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################