################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:09:35 2021 # Report_file: c_0152_5.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00002.pdb # 2: usage_00010.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00041.pdb # 6: usage_00060.pdb # 7: usage_00069.pdb # 8: usage_00075.pdb # 9: usage_00076.pdb # 10: usage_00077.pdb # 11: usage_00086.pdb # 12: usage_00110.pdb # 13: usage_00141.pdb # 14: usage_00178.pdb # 15: usage_00182.pdb # 16: usage_00183.pdb # 17: usage_00185.pdb # 18: usage_00187.pdb # 19: usage_00208.pdb # # Length: 116 # Identity: 17/116 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/116 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/116 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 QSVLSQSPAILSASPGEKVIMTCSPSSSVS--YMQWYQQKPGSSPKPWIYSTSNLASGVP 58 usage_00010.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASSSVN--YMYWYQQKSGTSPKRWIYDTSKLASGVP 56 usage_00022.pdb 1 -NVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVP 59 usage_00023.pdb 1 --VLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVP 58 usage_00041.pdb 1 -IVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 57 usage_00060.pdb 1 --VLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVP 58 usage_00069.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00075.pdb 1 -VVLTQSPGIMSASPGEKVTITCSASSSVS--YMYWFQQKPGTSPKLWIYSTSNLASGVP 57 usage_00076.pdb 1 --VLSQSPAILSASPGEKVTMTCRARSSVS--YMHWYQQKSGSSPKPWIHATSNLASGVP 56 usage_00077.pdb 1 --VLSQSPAILSASPGEKVTMTCRARSSVS--YMHWYQQKSGSSPKPWIHATSNLASGVP 56 usage_00086.pdb 1 --ELTQSPAIMAASPGEKVTITCSATSGVN--YMHWFQQKPGTSPKLWIYSTSNLASAVP 56 usage_00110.pdb 1 --AM--EPQDQTAVVGARVTLPCRVINKQG--TLQWTKD-----DFGLGTSRDL--S-GF 46 usage_00141.pdb 1 --VLSQSPAILSASPGEKVTMTCRASSSVS--YMHWYQQKPGSSPKPWIYAPSNLASGVP 56 usage_00178.pdb 1 --VLTQSPAIMSAFPGESVTMTCSASSSVS--YMYWYQQKPGSSPRLLIYDTSNLASGVP 56 usage_00182.pdb 1 --VLTQSPAIMSAFPGESVTMTCSASSSVS--YMYWYQQKPGSSPRLLIYDTSNLASGVP 56 usage_00183.pdb 1 -IVLTQSPAIMSAFPGESVTMTCSASSSVS--YMYWYQQKPGSSPRLLIYDTSNLASGVP 57 usage_00185.pdb 1 --ELTQSPAIMSASPGEKVTMTCSASSSVS--YMHWYQQKSGTSPKRWIYDTSKLASGVP 56 usage_00187.pdb 1 QIVLSQSPAILSASPGEKVTMTCRASSSVN--NMHWYQQKPSSSPKPWLHGTSNLASGVP 58 usage_00208.pdb 1 --VLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVP 58 l sP i pG Vt tC s v W qq p s S vp usage_00002.pdb 59 GRFSGGGS---GTSFSLTISGVEAEDAATYYCQQYSS---HPLTFGGGTKLEL--- 105 usage_00010.pdb 57 VRFSGSGS---GTSYSLTISSMETEDAATYYCQQWGR---NPTFGGGTKLEI---- 102 usage_00022.pdb 60 ARFSGSGS---GTSYSLTISSVEAEDAATYYCQQFSG---YPLTFGSGTKLEM--- 106 usage_00023.pdb 59 ARFSGSGS---GTSYSLTISSVEAEDAATYYCQQFSG---YPLTFGSGTKLEM--- 105 usage_00041.pdb 58 VRFSGSGS---GTSYSLTINTMEAEDAATYYCQQWSS---HPQTFGGGTKLEI--- 104 usage_00060.pdb 59 ARFSGSGS---GTSYSLTISSMEAEDAASYFCHQWSS---FPFTFGSGTKLEI--- 105 usage_00069.pdb 59 VRFSGSGS---GTSYSLTINTMEAEDAATYYCQQWSS---HPQTFGGGTKLEI--- 105 usage_00075.pdb 58 ARFRGSGS---GTSYSLTISRMEAEDAATYYCQQRSG---YPRTFGGGTKLEI--- 104 usage_00076.pdb 57 ARFSGSGS---GTSYSLTISRVEAEDAATYYCQQWSS---HPPTFGSGTKLEI--- 103 usage_00077.pdb 57 ARFSGSGS---GTSYSLTISRVEAEDAATYYCQQWSS---HPPTFGSGTKLEIKRA 106 usage_00086.pdb 57 ARFSGSGS---GTSYSLTISRMEAEDAATYYCQQRST---YPFTFGGGTKLELKRA 106 usage_00110.pdb 47 ERYAMVGSDEE-GDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLTVLVP 101 usage_00141.pdb 57 ARFSGSGS---GTSYSLTISRVEAEDAATYYCQQWSF---NPPTFGAGTKLELKRT 106 usage_00178.pdb 57 VRFSGSGS---GTSYSLTINRLEAEDGATYYCQQWTS---YPLTFGAGTKLELKRA 106 usage_00182.pdb 57 VRFSGSGS---GTSYSLTINRLEAEDGATYYCQQWTS---YPLTFGAGTKLELKRA 106 usage_00183.pdb 58 VRFSGSGS---GTSYSLTINRLEAEDGATYYCQQWTS---YPLTFGAGTKLELKRA 107 usage_00185.pdb 57 GRFSGSGS---GNSYSLTISSVEAEDDATYYCQQWSK---HPLTFGSGTKVEI--- 103 usage_00187.pdb 59 VRFSGSGS---GTSFSLTISRVEAEDAATYFCQQWSN---HPPTFGGGTKLEIDRA 108 usage_00208.pdb 59 ARFSGSGS---GTSYSLTISSVEAEDAATYYCQQFSG---YPLTFGSGTKLEMKRA 108 Rf g GS s SLtI e eD A Y Cqq P g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################