################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:15 2021 # Report_file: c_0640_7.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00009.pdb # 4: usage_00025.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # 10: usage_00042.pdb # 11: usage_00068.pdb # 12: usage_00069.pdb # 13: usage_00070.pdb # 14: usage_00071.pdb # 15: usage_00072.pdb # # Length: 135 # Identity: 118/135 ( 87.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/135 ( 88.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/135 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00005.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00009.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 usage_00025.pdb 1 ADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 60 usage_00037.pdb 1 -----------KVIGSDKKGNGVALATTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00038.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00039.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00040.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00041.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00042.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSI 49 usage_00068.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 usage_00069.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 usage_00070.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 usage_00071.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 usage_00072.pdb 1 -----------KVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSI 49 KVIGSDKKGNGVALmTTLFADNQETIGYFKRLG VSQGMANDKLRGHSI usage_00004.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKVAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00005.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKLAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00009.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00025.pdb 61 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 120 usage_00037.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00038.pdb 50 TLMYALQNFIDQLDNPDDLVCVVERFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00039.pdb 50 TLMYALQNFIDQLDNPDDLVCVVERFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00040.pdb 50 TLMYALQNFIDQLDNPDDLVCVVERFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00041.pdb 50 TLMYALQNFIDQLDNPDDLVCVVERFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00042.pdb 50 ALMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKY 109 usage_00068.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKFNGPIKKVLASKNFGDKY 109 usage_00069.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKFNGPIKKVLASKNFGDKY 109 usage_00070.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKFNGPIKKVLASKNFGDKY 109 usage_00071.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKFNGPIKKVLASKNFGDKY 109 usage_00072.pdb 50 TLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKFNGPIKKVLASKNFGDKY 109 tLMYALQNFIDQLDNPDDLVCVVE AVNHITRKISAAEFGK NGPIKKVLASKNFGDKY usage_00004.pdb 110 ANAWAKLVAVVQAAL 124 usage_00005.pdb 110 ANAWAKLVAVVQAAL 124 usage_00009.pdb 110 ANAWAKLVAVVQAAL 124 usage_00025.pdb 121 ANAWAKLVAVVQAAL 135 usage_00037.pdb 110 ANAWAKLVAVVQAAL 124 usage_00038.pdb 110 ANAWAKLVAVVQAAL 124 usage_00039.pdb 110 ANAWAKLVAVVQAAL 124 usage_00040.pdb 110 ANAWAKLVAVVQAAL 124 usage_00041.pdb 110 ANAWAKLVAVVQAAL 124 usage_00042.pdb 110 ANAWAKLVAVVQAAL 124 usage_00068.pdb 110 ANAWAKLVAVVQAAL 124 usage_00069.pdb 110 ANAWAKLVAVVQAAL 124 usage_00070.pdb 110 ANAWAKLVAVVQAAL 124 usage_00071.pdb 110 ANAWAKLVAVVQAAL 124 usage_00072.pdb 110 ANAWAKLVAVVQAAL 124 ANAWAKLVAVVQAAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################