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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:28:46 2021
# Report_file: c_0558_36.html
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#====================================
# Aligned_structures: 6
#   1: usage_00226.pdb
#   2: usage_00240.pdb
#   3: usage_00242.pdb
#   4: usage_00243.pdb
#   5: usage_00244.pdb
#   6: usage_00245.pdb
#
# Length:         94
# Identity:       38/ 94 ( 40.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     49/ 94 ( 52.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/ 94 ( 17.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00226.pdb         1  TYFKNVFEGHIASQYLHNVGRPDVDD--LGT--SYGEAHLDSEASYFGPSFMINWLHNRY   56
usage_00240.pdb         1  TYFKNVFEGHIASQYLHNVGRPDVD-----------EAHLDSEASYFGPSFMINWLHNRY   49
usage_00242.pdb         1  RYFKNVFEGHTATQYMHSTGREDVISGTNY--DD-PNAELRSEATYFGPSYMIDWLESDA   57
usage_00243.pdb         1  RYFKNVFEGHTATQYMHSTGREDVIS-----YDD-PNAELRSEATYFGPSYMIDWLESDA   54
usage_00244.pdb         1  RYFKNVFEGHTATQYMHSTGREDVISGTNY--DD-PNAELRSEATYFGPSYMIDWLESDA   57
usage_00245.pdb         1  VYFKNVFEGHVASQFMRGQAREDTR-----------MIGSRSDASYFGPSFMIDDLVYEY   49
                            YFKNVFEGH A Qy h  gR Dv             a l SeA YFGPS MI wL    

usage_00226.pdb        57  GNYKSESILINCHYPVTQNSFVLQWGVIV-----   85
usage_00240.pdb        50  GNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG   83
usage_00242.pdb        58  NGQTIETILINCHYPVSNNEFVLQYGAIVKK---   88
usage_00243.pdb        55  NGQTIETILINCHYPVSNNEFVLQYGAIV-----   83
usage_00244.pdb        58  NGQTIETILINCHYPVSNNEFVLQYGAIVKKLPG   91
usage_00245.pdb        50  EGYDVESVLINCHYPVSQDKFVLMYGMIV-----   78
                                E iLINCHYPV  n FVLq G IV     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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