################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:27 2021 # Report_file: c_0328_52.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00413.pdb # 2: usage_00414.pdb # 3: usage_00415.pdb # 4: usage_00416.pdb # 5: usage_00417.pdb # # Length: 192 # Identity: 115/192 ( 59.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 115/192 ( 59.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 76/192 ( 39.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00413.pdb 1 ----------------------------------------AQLHASLGVLYNLSNNYDSA 20 usage_00414.pdb 1 ---------------------------------------DAQLHASLGVLYNLSNNYDSA 21 usage_00415.pdb 1 QPQYEQLGSVNL--FFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSA 58 usage_00416.pdb 1 ----------------------------------------AQLHASLGVLYNLSNNYDSA 20 usage_00417.pdb 1 ----EQLGSVN-EDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSA 55 AQLHASLGVLYNLSNNYDSA usage_00413.pdb 21 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 80 usage_00414.pdb 22 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 81 usage_00415.pdb 59 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 118 usage_00416.pdb 21 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 80 usage_00417.pdb 56 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 115 AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS usage_00413.pdb 81 NMSQYDLAAKQLVRAIYMQVG-------GTTSREATRSMWDFFRMLLNVMNRPDLVELTY 133 usage_00414.pdb 82 NMSQYDLAAKQLVRAIYMQVGGTT-PAS----REATRSMWDFFRMLLNVMNRPDLVELTY 136 usage_00415.pdb 119 NMSQYDLAAKQLVRAIYMQVG---GEAS----REATRSMWDFFRMLLNVMN--------- 162 usage_00416.pdb 81 NMSQYDLAAKQLVRAIYMQ-V--------------TRSMWDFFRMLLNVMNRPDLVELTY 125 usage_00417.pdb 116 NMSQYDLAAKQLVRAIYMQ-V-------------ATRSMWDFFRMLLNVMN--------- 152 NMSQYDLAAKQLVRAIYMQ TRSMWDFFRMLLNVMN usage_00413.pdb 134 AQNVEPFAKEFG 145 usage_00414.pdb 137 AQNVEPFAKEF- 147 usage_00415.pdb ------------ usage_00416.pdb 126 AQNVEPFAKEF- 136 usage_00417.pdb ------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################