################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:56:01 2021 # Report_file: c_0047_3.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00009.pdb # 7: usage_00010.pdb # 8: usage_00011.pdb # 9: usage_00012.pdb # 10: usage_00013.pdb # 11: usage_00014.pdb # 12: usage_00015.pdb # 13: usage_00024.pdb # 14: usage_00067.pdb # 15: usage_00068.pdb # 16: usage_00069.pdb # 17: usage_00113.pdb # 18: usage_00116.pdb # # Length: 249 # Identity: 47/249 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/249 ( 41.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/249 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00005.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00006.pdb 1 -TAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 54 usage_00007.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00008.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00009.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00010.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00011.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00012.pdb 1 -TAVITGGGSGIGLATAKRFVAEGAYVFIVDV--SRKELEQAAAEIG---RNVTAVKADV 54 usage_00013.pdb 1 -TAVITGGGSGIGLATAKRFVAEGAYVFIVDV--SRKELEQAAAEIG---RNVTAVKADV 54 usage_00014.pdb 1 KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV--SRKELEQAAAEIG---RNVTAVKADV 55 usage_00015.pdb 1 KTAVITGGGSGIGLATAKRFVAEGAYVFIVDV--SRKELEQAAAEIG---RNVTAVKADV 55 usage_00024.pdb 1 -IAIVTGASSGIGRAAALLFAREGAKVVVTAR--NGNALAELTDEIAGGGGEAAALAGDV 57 usage_00067.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00068.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00069.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00113.pdb 1 KTAVITGGNSGIGLATAKRFVAEGAYVFIVGR--RRKELEQAAAEIG---RNVTAVKADV 55 usage_00116.pdb 1 -KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL 59 A TGg SGIG A A f EGA V i l q aeI r a Dv usage_00004.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00005.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00006.pdb 55 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 112 usage_00007.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00008.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00009.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00010.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00011.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00012.pdb 55 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 112 usage_00013.pdb 55 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 112 usage_00014.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFNNAGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00015.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFNNAGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00024.pdb 58 GDEALHEALVELAVRRFGGLDTAFNNAGALGAMG-EISSLSVEGWRETLDTNLTSAFLAA 116 usage_00067.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00068.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00069.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00113.pdb 56 TKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QK-TLEEITPEHYDRTFDVNVRGLIFTV 113 usage_00116.pdb 60 SDESFARSLVHKAREALGGLDILALVAGKQT-AIPEIKDLTSEQFQQTFAVNVFALFWIT 118 L re G D lf n Ga t E TfdvNv l usage_00004.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00005.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00006.pdb 113 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 169 usage_00007.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00008.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00009.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00010.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00011.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00012.pdb 113 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 169 usage_00013.pdb 113 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 169 usage_00014.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00015.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00024.pdb 117 KYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVN 176 usage_00067.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00068.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00069.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00113.pdb 114 QKALPLLR--DGGSVILTSSVAG-VLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVN 170 usage_00116.pdb 119 QEAIPLLP--KGASIITTSSIQA-YQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 175 q a Pll GgS i TSS g g Y A KAa l r el r IRVN usage_00004.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00005.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00006.pdb 170 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 211 usage_00007.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00008.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00009.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00010.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00011.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00012.pdb 170 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 211 usage_00013.pdb 170 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 211 usage_00014.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00015.pdb 171 AVSPGAIDTP------------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSY 212 usage_00024.pdb 177 ALLPGGTDTPANFAN---------PETRGFVEGLHALKRIARPEEIAEAALYLASDGASF 227 usage_00067.pdb 171 AVSPGAIDTPIIE--NQ-TQEEA-DELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSY 226 usage_00068.pdb 171 AVSPGAIDTPIIE--NQ-STQEEADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSY 227 usage_00069.pdb 171 AVSPGAIDTPIIE--NV-STQEEADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSY 227 usage_00113.pdb 171 AVSPGAID-----------------ELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSY 213 usage_00116.pdb 176 IVAPGPIWTALQI--SGGQ----TQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 229 av PG id f tpl R grPeElA a l LASd sSy usage_00004.pdb 213 VAGIELFVD 221 usage_00005.pdb 213 VAGIELFVD 221 usage_00006.pdb 212 VAGIELFVD 220 usage_00007.pdb 213 VAGIELFVD 221 usage_00008.pdb 213 VAGIELFVD 221 usage_00009.pdb 213 VAGIELFVD 221 usage_00010.pdb 213 VAGIELFVD 221 usage_00011.pdb 213 VAGIELFVD 221 usage_00012.pdb 212 VAGIELFVD 220 usage_00013.pdb 212 VAGIELFVD 220 usage_00014.pdb 213 VAGIELFVD 221 usage_00015.pdb 213 VAGIELFVD 221 usage_00024.pdb 228 VTGAALLAD 236 usage_00067.pdb 227 VAGIELFVD 235 usage_00068.pdb 228 VAGIELFVD 236 usage_00069.pdb 228 VAGIELFVD 236 usage_00113.pdb 214 VAGIELFVD 222 usage_00116.pdb 230 VTAEVHGVC 238 V g l vd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################