################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:31 2021 # Report_file: c_0653_28.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00419.pdb # 2: usage_01003.pdb # 3: usage_01004.pdb # 4: usage_01005.pdb # 5: usage_01006.pdb # 6: usage_01007.pdb # 7: usage_01009.pdb # 8: usage_01430.pdb # 9: usage_01435.pdb # 10: usage_01436.pdb # 11: usage_01661.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 72 ( 26.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 72 ( 56.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00419.pdb 1 -SCRLPGVV-TTSPIITN-N---SINIFVGPGTDI---SSLAPEFTLTP-------GAT- 43 usage_01003.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01004.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01005.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01006.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01007.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01009.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01430.pdb 1 ---------KDYAFSINLRGRRAGRWHVHAQI---NVEGGGPIIGPGQWIEIKGDMKDFT 48 usage_01435.pdb 1 G--------KTYDFRVVLKARRPGDWHVHTMM---NVQGGGPIIGPGKWITVEGSMSEFR 49 usage_01436.pdb 1 ---------KTYDFRVVLKARRPGDWHVHTMM---NVQGGGPIIGPGKWITVEGSMSEFR 48 usage_01661.pdb 1 -------------FRVVLKARRPGDWHVHTMM---NVQGGGPIIGPGKWITVEGSMSEFR 44 f l g whvh gggpiigpg w f usage_00419.pdb 44 ID---------- 45 usage_01003.pdb 49 DPVTLLDGSTVD 60 usage_01004.pdb 49 DPVTLLDGSTVD 60 usage_01005.pdb 49 DPVTLLDGSTVD 60 usage_01006.pdb 49 DPVTLLDGSTVD 60 usage_01007.pdb 49 DPVTLLDGSTVD 60 usage_01009.pdb 49 DPVTLLDGSTVD 60 usage_01430.pdb 49 DPVTLLDGSTVD 60 usage_01435.pdb 50 NPVTTLTGQTVD 61 usage_01436.pdb 49 NPVTTLTGQTVD 60 usage_01661.pdb 45 NPVTTLTGQTVD 56 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################