################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:36 2021 # Report_file: c_1020_55.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00272.pdb # 2: usage_00273.pdb # 3: usage_00377.pdb # 4: usage_00378.pdb # 5: usage_00396.pdb # 6: usage_00411.pdb # 7: usage_00412.pdb # 8: usage_00469.pdb # # Length: 55 # Identity: 4/ 55 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 55 ( 30.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 55 ( 29.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00272.pdb 1 -GILVPGGF--RGIEGKVRAAQYARERKIP----YLGICLGLQIAVIEFARNVAG 48 usage_00273.pdb 1 -GILVPGGV--RGIEGKVRAAQYARERKIP----YLGICLGLQIAVIEFARNVAG 48 usage_00377.pdb 1 -AILVPGGFGYRGVEGMITTARFARENNIP----YLGICLGMQVALIDYARHVAN 50 usage_00378.pdb 1 -AILVPGGFGYRGVEGMITTARFARENNIP----YLGICLGMQVALIDYARHVAN 50 usage_00396.pdb 1 PFLCVIG----HNVAGVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRY------- 44 usage_00411.pdb 1 NGIIVLPGFGSRGAEGKIKAIKYAREHNIP----FLGICFGFQLSIVEFARDVLG 51 usage_00412.pdb 1 NGIIVLPGFGSRGAEGKIKAIKYAREHNIP----FLGICFGFQLSIVEFARDVLG 51 usage_00469.pdb 1 -AILVPGGFGYRGVEGMITTARFARENNIP----YLGICLGMQVALIDYARHVA- 49 i V rg eG are ip lGiC g q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################