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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:32:23 2021
# Report_file: c_0408_4.html
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#====================================
# Aligned_structures: 11
#   1: usage_00001.pdb
#   2: usage_00002.pdb
#   3: usage_00004.pdb
#   4: usage_00007.pdb
#   5: usage_00009.pdb
#   6: usage_00011.pdb
#   7: usage_00023.pdb
#   8: usage_00028.pdb
#   9: usage_00033.pdb
#  10: usage_00038.pdb
#  11: usage_00040.pdb
#
# Length:        116
# Identity:        2/116 (  1.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      5/116 (  4.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           52/116 ( 44.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  -----MFFLFS-----DMLLYTSKSVTGASH--FRI---RGFLPLRGMLV-EE--SE--N   40
usage_00002.pdb         1  -----WVVFTN-----FCLFFYKTH----QD--DYP---LASLPLLGYSV-SLDS-----   35
usage_00004.pdb         1  -WQKLWVVFTN-----FCLFFYKSH----QD--NHP---LASLPLLGYSL-TI-------   37
usage_00007.pdb         1  -----WCSVRD-----NHLHFYQDR----NR--SKV--AQQPLSLVGCEV-VP--DP--S   37
usage_00009.pdb         1  -----WFVLVD-----RCLFYYKDE----KE--ESI---LGSIPLLSFRV-AA--VQ--P   36
usage_00011.pdb         1  ----RWFVLSD-----LCLFYYRDE----KE--EGI---LGSILLPSFQI-AL--LT--S   37
usage_00023.pdb         1  LWKRRWFVLSG-----HCLFYYKDS----RE--ESV---LGSVLLPSYNI-RP--DG--P   41
usage_00028.pdb         1  -----FFVLVQVSQYTFAMCSYREK-----K--AEP---QELLQLDGYTV-DY--TDPQP   42
usage_00033.pdb         1  ----RWFVLVD-----RCLFYYKDE----KE--ESI---LGSIPLLSFRV-AA--VQ--P   37
usage_00038.pdb         1  -----YVVLRG-----HSLYLYKDK----RE-QTTPSEEEQPISVNACLI-DI--SY--S   40
usage_00040.pdb         1  -----FFHLIQLGDGSYNLNFYKDE----KIS-KEP---KGSIFLDSCMGVVQ--N---N   42
                                             l  y                      l               

usage_00001.pdb        41  EW---SVLHCFTIYA-AQK-TIVVAASTRLEKEKWMQDLNAAIQAA----------   81
usage_00002.pdb        36  IH---K-DYVFKLQF-KSH-VYFFRAESKYTFERWMDVIKRA--------------   71
usage_00004.pdb        38  --------YVFKLHF-KSH-VYYFRAESEYTFERWMEVIRSA--------------   69
usage_00007.pdb        38  ---PDH-LYSFRILH-KGEELAKLEAKSSEEMGHWLGLLLSE--------------   74
usage_00009.pdb        37  SDNISR-KHTFKAEHAGVR-TYFFSAESPEEQEAWIQAMGEAA-------------   77
usage_00011.pdb        38  EDHINR-KYAFKAAHPNMR-TYYFCTDTGKEMELWMKAMLDAA-------------   78
usage_00023.pdb        42  GAPRGR-RFTFTAEHPGMR-TYVLAADTLEDLRGWLRALGRA--------------   81
usage_00028.pdb        43  G-LEGG-RAFFNAVK-EGD-TVIFASDDEQDRILWVQAMYRAT-------------   81
usage_00033.pdb        38  SDNISR-KHTFKAEHAGVR-TYFFSAESPEEQEAWIQAMGEAAR------------   79
usage_00038.pdb        41  --ETKR-KNVFRLTT-SDC-ECLFQAEDRDDMLAWIKTIQESSN------------   79
usage_00040.pdb        43  ---KVR-RFAFELKMQDKS-SYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRN   93
                                     F                       W                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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