################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:31 2021 # Report_file: c_0202_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00015.pdb # 8: usage_00016.pdb # 9: usage_00017.pdb # 10: usage_00020.pdb # 11: usage_00021.pdb # # Length: 260 # Identity: 157/260 ( 60.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/260 ( 61.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/260 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --GAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 58 usage_00010.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 57 usage_00011.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 57 usage_00012.pdb 1 --GAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 58 usage_00013.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 57 usage_00014.pdb 1 ANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 60 usage_00015.pdb 1 ANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 60 usage_00016.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDI 57 usage_00017.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDI 57 usage_00020.pdb 1 ANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 60 usage_00021.pdb 1 ---AGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 57 AGHYVKMVHNGIEYGDMQLIAE Y LLK L L N E F EWN GEL SYLI I usage_00009.pdb 59 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 118 usage_00010.pdb 58 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 117 usage_00011.pdb 58 TKEVLKRKDDEGEGYIVDKILDKAG-GT-GKWTSESALDLGVPLPLITESVFARYISTYK 115 usage_00012.pdb 59 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 118 usage_00013.pdb 58 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 117 usage_00014.pdb 61 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 120 usage_00015.pdb 61 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 120 usage_00016.pdb 58 TKDIFTKKD-EDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLK 116 usage_00017.pdb 58 TKDIFTKKD-EDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLK 116 usage_00020.pdb 61 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 120 usage_00021.pdb 58 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYK 117 TK KD E Y VD ILD A kg GKWTS SALDLG PL LITESVFARYIS K usage_00009.pdb 119 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 178 usage_00010.pdb 118 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 177 usage_00011.pdb 116 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 175 usage_00012.pdb 119 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 178 usage_00013.pdb 118 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 177 usage_00014.pdb 121 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 180 usage_00015.pdb 121 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 180 usage_00016.pdb 117 DQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNY 176 usage_00017.pdb 117 DQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNY 176 usage_00020.pdb 121 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 180 usage_00021.pdb 118 DERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPY 177 D RV ASKVLSGP GDK E IEK R ALY KI SYAQGF QLR ASEE WDL Y usage_00009.pdb 179 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 238 usage_00010.pdb 178 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 237 usage_00011.pdb 176 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 235 usage_00012.pdb 179 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 238 usage_00013.pdb 178 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 237 usage_00014.pdb 181 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 240 usage_00015.pdb 181 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 240 usage_00016.pdb 177 GEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQ 236 usage_00017.pdb 177 GEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQ 236 usage_00020.pdb 181 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 240 usage_00021.pdb 178 GTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQ 237 G IA I RAGCIIRA FLQ ITDA NLLL YF I YQ A RDVV AVQ usage_00009.pdb 239 AGTPIPTFTSAISYYDSYRS 258 usage_00010.pdb 238 AGTPIPTFTSAISYYDSYRS 257 usage_00011.pdb 236 AGTPIPTFTSAISYYDSYRS 255 usage_00012.pdb 239 AG------------------ 240 usage_00013.pdb 238 AGTPIPTFTSAISYYDSYRS 257 usage_00014.pdb 241 AGTPIPTFTSAISYYDSYRS 260 usage_00015.pdb 241 AGTPIPTFTSAISYYDSYRS 260 usage_00016.pdb 237 N------------------- 237 usage_00017.pdb 237 NGIPVPTFSAAVAYYDSYRA 256 usage_00020.pdb 241 AGTPIPTFTSAISYYDSYR- 259 usage_00021.pdb 238 AGTPIPTFTSAISYYDSYRS 257 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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