################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:07 2021 # Report_file: c_0334_6.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00026.pdb # 2: usage_00031.pdb # 3: usage_00033.pdb # 4: usage_00036.pdb # 5: usage_00039.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00091.pdb # # Length: 67 # Identity: 9/ 67 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 67 ( 31.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 67 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 ERVYIKLRGARTLVGTLQAFDSHSNIVLSDAVETIYQLN--E--S--ERRSEMVFIRGDT 54 usage_00031.pdb 1 --VYIKLRGARTLVGTLQAFDSHSNIVLSDAVETIYQLNNEELS-ESERRSEMVFIRGDT 57 usage_00033.pdb 1 --VYIKLRGARTLVGTLQAFDSHSNIVLSDAVETIYQLNNEELS-ESERRSEMVFIRGDT 57 usage_00036.pdb 1 --VVIILVDGESLIASLNGFDKNTNLFLTNVFNR-----------KEF-ISKAQLLRGSE 46 usage_00039.pdb 1 --VYIKLRGARTLVGTLQAFDSHSNIVLSDAVETIYQLNNEELS-ESERRSEMVFIRGDT 57 usage_00087.pdb 1 --VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELS-ESERRCEMVFIRGDT 57 usage_00088.pdb 1 --VYIKLRGARTLVGTLQAFDSHCNIVLSDAVET-------------ERRCEMVFIRGDT 45 usage_00091.pdb 1 --IFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF-SEENK--YAEEDRGIFMIRGEN 55 v i Lr r L g L FD N L d ve e iRG usage_00026.pdb 55 VTLIS-- 59 usage_00031.pdb 58 VTLIST- 63 usage_00033.pdb 58 VTLIS-- 62 usage_00036.pdb 47 IALVGL- 52 usage_00039.pdb 58 VTLIS-- 62 usage_00087.pdb 58 VTLISTP 64 usage_00088.pdb 46 VTLISTP 52 usage_00091.pdb 56 VVMLGE- 61 v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################