################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:10 2021 # Report_file: c_1357_134.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_01014.pdb # 5: usage_01182.pdb # 6: usage_01198.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 58 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 58 ( 55.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -AV---ASVRTLD--DKQVLQQCMATLRELFK--E-Q---EVPDPTKYFVT------- 39 usage_00006.pdb 1 -AV---ASVRTLD--DKQVLQQCMATLRELFK--E-Q---EVPDPTKYFVT------- 39 usage_00007.pdb 1 EAV---ASVRTLD--DKQVLQQCMATLRELFK--E-Q---EVPDPTKYFVT------- 40 usage_01014.pdb 1 --G---RELKELD--VEGIFNDVVENVKRLYQEAE-L---VHAD-------------- 33 usage_01182.pdb 1 ------SSINANNPNNYQLMKNFMKDIVDRF---NKTGPDGTQFAV-----VTFA--- 41 usage_01198.pdb 1 --GPEVLSKWVG-E-SEKAIREIFKKAKQVA---P-A---IV-------------FLD 34 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################