################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:49 2021 # Report_file: c_1489_297.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00534.pdb # 2: usage_02146.pdb # 3: usage_02390.pdb # 4: usage_02884.pdb # 5: usage_02901.pdb # 6: usage_03986.pdb # 7: usage_04136.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 46 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 46 ( 67.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00534.pdb 1 --------DHILDLSVQFNIIPKRFA---K--E-PIDIDLYFAIA- 31 usage_02146.pdb 1 ---------FVLDTAV-VGAVPERFG---E--Y-R-GLSTYFDA-- 27 usage_02390.pdb 1 ---------FVLDTAV-VGAVPERFG---E--Y-R-GLSTYFDA-- 27 usage_02884.pdb 1 --------DQVLDLSLLFNAIPERYTKFDL----A-PIDVLFAMGR 33 usage_02901.pdb 1 YSRLAAVPGLEELFYRGMH-------------------AWSQLS-- 25 usage_03986.pdb 1 --------DQVLDTTA-LGAVPPRYG---YTGGEI-GLDVYFSA-- 31 usage_04136.pdb 1 --------DFVLDTAVMVGAVPERFG---E--Y-R-GLSTYFDMA- 30 ld f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################