################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:39 2021 # Report_file: c_0503_14.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00092.pdb # 2: usage_00136.pdb # 3: usage_00154.pdb # 4: usage_00155.pdb # # Length: 93 # Identity: 8/ 93 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 93 ( 30.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 93 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00092.pdb 1 EDDYRNAQNRV-AAIGGPWSFPLIEAANPD-IAGK-YSVALHPYDAK-P-ASVLG-GWAL 54 usage_00136.pdb 1 ---AF-RTDAFAT-ACPGWLLGVIADNAGTFGKGKWDVAD-V-FP----GGGGNWGGSYL 49 usage_00154.pdb 1 VWYEF-FNGYYAFYLSGPWNVREFKLRQPPGMEGNWGTAPLP-GPNGLG-AGIAG-GSSL 56 usage_00155.pdb 1 VWYEF-FNGYYAFYLSGPWNVREFKLRQPPGMEGNWGTAPLP-GPNGLG-AGIAG-GSSL 56 f gpW p G a p ag g Gs L usage_00092.pdb 55 VIPSSSPNKEDAWKLAEYLTSFDVWKWVEEK-G 86 usage_00136.pdb 50 TVPTQSTQPAEAAKLAAWLTAPEQQIKVFKK-- 80 usage_00154.pdb 57 VIFKSSQHKDASWKLIEYLSQPQVQARFHAI-- 87 usage_00155.pdb 57 VIFKSSQHKDASWKLIEYLSQPQVQARFHAIIG 89 vi sS k wKL eyL p vq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################