################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:30:14 2021 # Report_file: c_0118_9.html ################################################################################################ #==================================== # Aligned_structures: 47 # 1: usage_00042.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00046.pdb # 6: usage_00047.pdb # 7: usage_00048.pdb # 8: usage_00049.pdb # 9: usage_00050.pdb # 10: usage_00051.pdb # 11: usage_00052.pdb # 12: usage_00053.pdb # 13: usage_00054.pdb # 14: usage_00055.pdb # 15: usage_00079.pdb # 16: usage_00080.pdb # 17: usage_00082.pdb # 18: usage_00083.pdb # 19: usage_00085.pdb # 20: usage_00086.pdb # 21: usage_00087.pdb # 22: usage_00088.pdb # 23: usage_00089.pdb # 24: usage_00090.pdb # 25: usage_00091.pdb # 26: usage_00092.pdb # 27: usage_00123.pdb # 28: usage_00178.pdb # 29: usage_00273.pdb # 30: usage_00331.pdb # 31: usage_00338.pdb # 32: usage_00346.pdb # 33: usage_00347.pdb # 34: usage_00386.pdb # 35: usage_00387.pdb # 36: usage_00388.pdb # 37: usage_00437.pdb # 38: usage_00448.pdb # 39: usage_00449.pdb # 40: usage_00450.pdb # 41: usage_00489.pdb # 42: usage_00490.pdb # 43: usage_00491.pdb # 44: usage_00492.pdb # 45: usage_00493.pdb # 46: usage_00517.pdb # 47: usage_00543.pdb # # Length: 141 # Identity: 81/141 ( 57.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/141 ( 58.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/141 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNFSSSSMHWVRQAPGQGLEWVAYISPYYGST 57 usage_00043.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNFSSSSMHWVRQAPGQGLEWVAYISPYYGST 57 usage_00044.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00045.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00046.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00047.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00048.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00049.pdb 1 ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 60 usage_00050.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00051.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00052.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00053.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00054.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00055.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGYT 56 usage_00079.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVASISSYYGST 56 usage_00080.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVASISSYYGST 56 usage_00082.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNLYYYSIHWVRQAPGKGLEWVASISPYSSST 56 usage_00083.pdb 1 -SEVQLVESGGGLVQPGGSLRLSCAASGFNLYYYSIHWVRQAPGKGLEWVASISPYSSST 59 usage_00085.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00086.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00087.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00088.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00089.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00090.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00091.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00092.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVAYIYPSYSYT 56 usage_00123.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYT 56 usage_00178.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGST 57 usage_00273.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISPSYGYT 56 usage_00331.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFSISSSYIHWVRQAPGKGLEWVAYIYPYYGST 56 usage_00338.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGST 56 usage_00346.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNISYSSIHWVRQAPGKGLEWVASISSYYGST 57 usage_00347.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNISYSSIHWVRQAPGKGLEWVASISSYYGST 57 usage_00386.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYT 56 usage_00387.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYT 57 usage_00388.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYT 57 usage_00437.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFSFTSYGISWVRQAPGKGLEWVSHIDWYGGDT 56 usage_00448.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNISSYSIHWVRQAPGKGLEWVASISSYYSST 56 usage_00449.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNLSSSYMHWVRQAPGKGLEWVASISSSYGST 57 usage_00450.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNLSSSYMHWVRQAPGKGLEWVASISSSYGST 57 usage_00489.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYT 57 usage_00490.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYT 57 usage_00491.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYT 56 usage_00492.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYT 57 usage_00493.pdb 1 ---VQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYT 57 usage_00517.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGST 56 usage_00543.pdb 1 ----QLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGST 56 QLVESGGGLVQPGGSLRLSCAASGF hWVRQAPG GLEWVa I T usage_00042.pdb 58 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYGY---VYWN-AYS----- 108 usage_00043.pdb 58 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYGY---VYWN-AYS----- 108 usage_00044.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00045.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00046.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00047.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00048.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00049.pdb 61 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 103 usage_00050.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00051.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00052.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00053.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00054.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00055.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYY----------------- 99 usage_00079.pdb 57 SYADSVKGRFTISADT--NTAYLQMNSLRAEDTAVYYCARDRVMYYWS-----FS-KYGY 108 usage_00080.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDRVMYYWS-----FS-KYGY 110 usage_00082.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGRW----------------- 99 usage_00083.pdb 60 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGRW----------------- 102 usage_00085.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00086.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00087.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00088.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00089.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00090.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00091.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00092.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYG----------------- 99 usage_00123.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQ----F------W----- 101 usage_00178.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-----RR----- 103 usage_00273.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGIW----S-YWY-MVY-PHD 109 usage_00331.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYS----S-----GG-SYYR 106 usage_00338.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-----RR----- 102 usage_00346.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRGQA--S-----WD----Y 106 usage_00347.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRGQA--S-----WD----Y 106 usage_00386.pdb 57 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----------------- 99 usage_00387.pdb 58 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----------------- 100 usage_00388.pdb 58 SYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----------------- 100 usage_00437.pdb 57 DYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGGP----------------- 99 usage_00448.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQPS----Y-----HM----- 102 usage_00449.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTVR----G-----SK-KPYF 107 usage_00450.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTVR----G-----SK-KPYF 107 usage_00489.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY----------------- 100 usage_00490.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY----------------- 100 usage_00491.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY----------------- 99 usage_00492.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY----------------- 100 usage_00493.pdb 58 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY----------------- 100 usage_00517.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-----RR----- 102 usage_00543.pdb 57 YYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-----RR----- 102 YADSVKGRFTISADT NTAYLQMNSLRAEDTAVYYCAR usage_00042.pdb 109 S-----GMDYWGQ-GTLVTV- 122 usage_00043.pdb 109 S-----GMDYWGQ-GTLVTV- 122 usage_00044.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00045.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00046.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00047.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00048.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00049.pdb 104 ----GAAMDYWGQ-GTLVTVS 119 usage_00050.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00051.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00052.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00053.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00054.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00055.pdb 100 ----GAAMDYWGQ-GTLVTVS 115 usage_00079.pdb 109 ----PYGMDYWGQ-GTLVTVS 124 usage_00080.pdb 111 ----PYGMDYWGQ-GTLVTVS 126 usage_00082.pdb 100 ----YRRALDYWGQGTLVTVS 116 usage_00083.pdb 103 ----YRRALDYWGQGTLVTVS 119 usage_00085.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00086.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00087.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00088.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00089.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00090.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00091.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00092.pdb 100 ----TGAMDYWGQ-GTLVTVS 115 usage_00123.pdb 102 Y----SGLDYWGQ-GTLVTVS 117 usage_00178.pdb 104 S---GRGFDYWGQ-GTLVTVS 120 usage_00273.pdb 110 ----NYGMDYWGQ-GTLVTVS 125 usage_00331.pdb 107 Y---SRGFDYWGQ-GTLVTV- 122 usage_00338.pdb 103 S---GRGFDYWGQ-GTLVTVS 119 usage_00346.pdb 107 ----WWAMDYWGQ-GTLVTVS 122 usage_00347.pdb 107 ----WWAMDYWGQ-GTLVTVS 122 usage_00386.pdb 100 ----TKLAMDYWGQGTLVTVS 116 usage_00387.pdb 101 ----TKLAMDYWGQGTLVTVS 117 usage_00388.pdb 101 ----TKLAMDYWGQGTLVTVS 117 usage_00437.pdb 100 ----DYAMDVWGQ-GTLVTV- 114 usage_00448.pdb 103 YSWW-VALDYWGQ-GTLVTVS 121 usage_00449.pdb 108 S---GWAMDYWGQ-GTLVTVS 124 usage_00450.pdb 108 S---GWAMDYWGQ-GTLVTVS 124 usage_00489.pdb 101 ----YGFDYWGQG--TLVTVS 115 usage_00490.pdb 101 ----YGFDYWGQG--TLVTVS 115 usage_00491.pdb 100 ----YGFDYWGQG--TLVTVS 114 usage_00492.pdb 101 ----YGFDYWGQG--TLVTVS 115 usage_00493.pdb 101 ----YGFDYWGQG--TLVTVS 115 usage_00517.pdb 103 S---GRGFDYWGQ-GTLVTVS 119 usage_00543.pdb 103 S---GRGFDYWGQ-GTLVTVS 119 TLVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################