################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:34 2021 # Report_file: c_0755_22.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00006.pdb # 2: usage_00013.pdb # 3: usage_00046.pdb # 4: usage_00052.pdb # 5: usage_00053.pdb # 6: usage_00205.pdb # 7: usage_00237.pdb # 8: usage_00343.pdb # # Length: 62 # Identity: 23/ 62 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 62 ( 71.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 62 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 QVAVICGSGLGGLVNKLTQAQTFDYSEIPNFPESTVPGHAGRLVFGILNGRACVMMQGRF 60 usage_00013.pdb 1 QVAIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSH----AGRLVFGFLNGRACVMMQG-- 54 usage_00046.pdb 1 QVAIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQ--- 57 usage_00052.pdb 1 QVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQG-- 58 usage_00053.pdb 1 QVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST-----GRLVFGFLNGRACVMMQG-- 53 usage_00205.pdb 1 DIGIICGSGLGKLIEEIEERKVIPYINIPNFPKTTVAGHVGNLVLGSVGGRKIVAMQG-- 58 usage_00237.pdb 1 --AIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQG-- 56 usage_00343.pdb 1 --AIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQ--- 55 aiICGSGLGgL kltqaq fdY eIPNFP st GrLVfG lnGRacVmMQ usage_00006.pdb 61 HM 62 usage_00013.pdb -- usage_00046.pdb -- usage_00052.pdb -- usage_00053.pdb -- usage_00205.pdb -- usage_00237.pdb -- usage_00343.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################