################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:46 2021 # Report_file: c_1158_18.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00042.pdb # 2: usage_00152.pdb # 3: usage_00264.pdb # 4: usage_00410.pdb # 5: usage_00673.pdb # 6: usage_00908.pdb # 7: usage_00939.pdb # 8: usage_00940.pdb # 9: usage_01042.pdb # 10: usage_01103.pdb # 11: usage_01104.pdb # # Length: 39 # Identity: 1/ 39 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 39 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 39 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 -RILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 32 usage_00152.pdb 1 GRILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 33 usage_00264.pdb 1 GRILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 33 usage_00410.pdb 1 -RIT-REN-GKV-TGIVEHKDATDEQRQIQEINTG---- 31 usage_00673.pdb 1 GRIVRNDN-AEV-LRIVEQKDATDFEKQIKEINTG---- 33 usage_00908.pdb 1 -GRIVREN-GDV-VGIVEHKDASDAQREINEINTG---- 32 usage_00939.pdb 1 -RILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 32 usage_00940.pdb 1 -RILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 32 usage_01042.pdb 1 GHEFHVQSPFGPSPCKVLE----------------IDEP 23 usage_01103.pdb 1 -RILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 32 usage_01104.pdb 1 -RILRTQD-HEV-MAIVEQTDATPSQREIREVNAG---- 32 v iVe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################