################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:08 2021 # Report_file: c_0669_91.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00201.pdb # 2: usage_00233.pdb # 3: usage_01516.pdb # 4: usage_01517.pdb # 5: usage_01518.pdb # 6: usage_01519.pdb # 7: usage_01684.pdb # # Length: 93 # Identity: 23/ 93 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 93 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 93 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00201.pdb 1 DERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAG-SGGKEWERDVELGYTVQSGPL 59 usage_00233.pdb 1 DEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGP- 59 usage_01516.pdb 1 DERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVGPLK- 59 usage_01517.pdb 1 --RSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDG-GRGKEWERDTDIAYLVQSGPL 57 usage_01518.pdb 1 GERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTA-R-GDQSEWERDISLAYVIPDGTF 58 usage_01519.pdb 1 GERSWQLRYDYDFVALGIPGLTAMARYASGAHARTKAM-DDGRAWERDVDVAYVIQSGPL 59 usage_01684.pdb 1 DERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAG-SGGKEWERDVELGYTVQSGPL 59 rsWQ RYdYdF G PGL m rY G g eWERD Y g usage_00201.pdb 60 ARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW 92 usage_00233.pdb 60 -NLGVKWRNATMRTNYTNDYDENRLIVSYTLP- 90 usage_01516.pdb 60 -NLGIKLRNGTFRSDFGNDIDETRLI------- 84 usage_01517.pdb 58 KNLGIKLRNGTFRSDFGNDIDETRL-------- 82 usage_01518.pdb 59 KGLGFTWKNASFRSG---DQDENRLIVSYTLP- 87 usage_01519.pdb 60 KNLGLRWRNAMLRSNHAADVDENRLILSYSLPL 92 usage_01684.pdb 60 ARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW 92 L R D D RL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################