################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:01 2021 # Report_file: c_0974_49.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00044.pdb # 2: usage_00045.pdb # 3: usage_00046.pdb # 4: usage_00047.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00050.pdb # 8: usage_00051.pdb # 9: usage_00228.pdb # 10: usage_00605.pdb # 11: usage_01021.pdb # 12: usage_01022.pdb # 13: usage_01024.pdb # 14: usage_01025.pdb # 15: usage_01026.pdb # 16: usage_01027.pdb # # Length: 64 # Identity: 4/ 64 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 64 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 64 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00045.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00046.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00047.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00048.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00049.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00050.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00051.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY---YAVQSRT--ENVKEDVKSKVEAAL 48 usage_00228.pdb 1 SIHSVSVVEANYDEYALLFSRGTKGP---G-QD--FRMATLYSRTQTLKDELKEKFTTFS 54 usage_00605.pdb 1 GFNTFTILKTDYDNYIMFHL--INE-K--DGKTFQLMELYGRK--ADLNSDIKEKFVKLC 53 usage_01021.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 usage_01022.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 usage_01024.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 usage_01025.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 usage_01026.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 usage_01027.pdb 1 ---QVSYIDTDYSKYSVVHV--CDP-AAPD-YY--LYAVQSRT--ENVKEDVKSKVEAAL 49 vs tdY Y h d r k d K K usage_00044.pdb 49 GKVG 52 usage_00045.pdb 49 GKVG 52 usage_00046.pdb 49 GK-- 50 usage_00047.pdb 49 GK-- 50 usage_00048.pdb 49 GKVG 52 usage_00049.pdb 49 GKVG 52 usage_00050.pdb 49 GK-- 50 usage_00051.pdb 49 GK-- 50 usage_00228.pdb 55 KAQG 58 usage_00605.pdb 54 EEHG 57 usage_01021.pdb 50 GKVG 53 usage_01022.pdb 50 GK-- 51 usage_01024.pdb 50 GKVG 53 usage_01025.pdb 50 GKVG 53 usage_01026.pdb 50 GK-- 51 usage_01027.pdb 50 GK-- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################