################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:17 2021 # Report_file: c_0512_121.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00251.pdb # 2: usage_00357.pdb # 3: usage_00376.pdb # # Length: 156 # Identity: 38/156 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/156 ( 69.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/156 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00251.pdb 1 S--TLRQAMIDHING---VMGHYKG-KIAQWDVVNEAFSDDGS------GGRR------D 42 usage_00357.pdb 1 -SQSVDQRLESYIKNFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGR 59 usage_00376.pdb 1 S--TLRQAMIDHING---VMGHYKG-KIAQWDVVNEAFSDDGS------GGRR------D 42 tlrQamidhIng vmghYkg kiaqwDVVNeAfSDDgs GgRr d usage_00251.pdb 43 SNLQR-T-GNDWIEVAFRTARAADP-AAKLCYNDYNIENWTW-AKTQGVYNMVRDFKQRG 98 usage_00357.pdb 60 SPWVQIYGDNKFIEKAFTYARKYAPANCKLYYNDYNE-Y--WDHKRDCIASICANLYNKG 116 usage_00376.pdb 43 SNLQR-T-GNDWIEVAFRTARAADP-AAKLCYNDYNIENWTW-AKTQGVYNMVRDFKQRG 98 Snlqr t gNdwIEvAFrtARaadP aaKLcYNDYNi n W aKtqgvynmvrdfkqrG usage_00251.pdb 99 VPIDCVGFQSHFNSGSPY----N-SNFRTTLQNFAA 129 usage_00357.pdb 117 LL-DGVG-QSHINAD---NGFSGIQNYKAALQKYIN 147 usage_00376.pdb 99 VPIDCVGFQSHLIVGQVP----G-DFRQNLQRFAD- 128 vp DcVG QSH n g g n lq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################