################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:01 2021 # Report_file: c_0300_54.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00050.pdb # 2: usage_00051.pdb # 3: usage_00052.pdb # 4: usage_00053.pdb # 5: usage_00293.pdb # 6: usage_00577.pdb # # Length: 119 # Identity: 19/119 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/119 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/119 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 KALA---FDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAIITGGRTEAV 57 usage_00051.pdb 1 KFVI---TDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPIL 57 usage_00052.pdb 1 ----KLLIDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQK-GITLAVISGRDSAPL 55 usage_00053.pdb 1 ----KLLIDIDGVLTDGKLYY-----TIKVFNVLDGIGIKLLQK-GITLAVISGRDS--L 48 usage_00293.pdb 1 KFVI---TDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPIL 57 usage_00577.pdb 1 KFVI---TDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIK-LDA-DIQVAVLSGRDSPIL 55 D DGVLtdg l y ik f v DG gIk l i Av sGrds l usage_00050.pdb 58 RIRFAALGVKDLYMGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCP 116 usage_00051.pdb 58 RRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA- 115 usage_00052.pdb 56 ITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVKKVG-FPVAV 113 usage_00053.pdb 49 ITRLKELGVEEIYTG---KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVKKVG-FPVAV 103 usage_00293.pdb 58 RRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 116 usage_00577.pdb 56 RRRIADLGIKLFFLGKLEKETACFDL-KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 113 R LG G K e iGDD vD a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################