################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:32:16 2021 # Report_file: c_1484_250.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00109.pdb # 2: usage_00583.pdb # 3: usage_00584.pdb # 4: usage_00672.pdb # 5: usage_00673.pdb # 6: usage_00677.pdb # 7: usage_00678.pdb # 8: usage_01293.pdb # 9: usage_01977.pdb # 10: usage_01978.pdb # 11: usage_02697.pdb # 12: usage_02698.pdb # 13: usage_02699.pdb # 14: usage_02736.pdb # 15: usage_02806.pdb # 16: usage_02814.pdb # 17: usage_03406.pdb # 18: usage_03407.pdb # 19: usage_03408.pdb # 20: usage_03409.pdb # 21: usage_03410.pdb # 22: usage_03411.pdb # 23: usage_03413.pdb # 24: usage_03414.pdb # 25: usage_03606.pdb # 26: usage_03607.pdb # 27: usage_03608.pdb # 28: usage_03866.pdb # 29: usage_03867.pdb # 30: usage_04000.pdb # 31: usage_04001.pdb # 32: usage_04145.pdb # 33: usage_04146.pdb # 34: usage_04876.pdb # 35: usage_04877.pdb # # Length: 63 # Identity: 49/ 63 ( 77.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 63 ( 77.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 63 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_00583.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGV--- 55 usage_00584.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGV--- 55 usage_00672.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_00673.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_00677.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_00678.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_01293.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLN- 57 usage_01977.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_01978.pdb 1 ---LFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGV--- 53 usage_02697.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLN- 58 usage_02698.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDW-DRSKQLIFLGSGLWIALVLVVGVLNF 59 usage_02699.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDW-DRSKQLIFLGSGLWIALVLVVGVLNF 59 usage_02736.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 58 usage_02806.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_02814.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03406.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03407.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03408.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03409.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03410.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03411.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03413.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03414.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03606.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGV--- 56 usage_03607.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03608.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03866.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_03867.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_04000.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 58 usage_04001.pdb 1 -TILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 58 usage_04145.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_04146.pdb 1 --ILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 57 usage_04876.pdb 1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 59 usage_04877.pdb 1 --ILFQLALAALVILSFVMVIGVPVAYASPQDWDRSK-QLIFLGSGLWIALVLVVGVLNF 57 LFQLALAALVILSFVMVIGVPVAYASPQDW QLIFLGSGLWIALVLVVGV usage_00109.pdb 60 FV- 61 usage_00583.pdb --- usage_00584.pdb --- usage_00672.pdb 60 FVV 62 usage_00673.pdb 60 FVV 62 usage_00677.pdb 60 FVV 62 usage_00678.pdb 60 FVV 62 usage_01293.pdb --- usage_01977.pdb 60 FV- 61 usage_01978.pdb --- usage_02697.pdb --- usage_02698.pdb 60 FV- 61 usage_02699.pdb 60 FV- 61 usage_02736.pdb 59 FVV 61 usage_02806.pdb 60 FVV 62 usage_02814.pdb 60 FVV 62 usage_03406.pdb 60 FVV 62 usage_03407.pdb 60 FVV 62 usage_03408.pdb 60 FVV 62 usage_03409.pdb 60 FVV 62 usage_03410.pdb 60 FVV 62 usage_03411.pdb 60 FVV 62 usage_03413.pdb 60 FVV 62 usage_03414.pdb 60 FVV 62 usage_03606.pdb --- usage_03607.pdb 60 FVV 62 usage_03608.pdb 60 FV- 61 usage_03866.pdb 60 FVV 62 usage_03867.pdb 60 FVV 62 usage_04000.pdb 59 FV- 60 usage_04001.pdb 59 FVV 61 usage_04145.pdb 60 FV- 61 usage_04146.pdb 58 FV- 59 usage_04876.pdb 60 FVV 62 usage_04877.pdb 58 FVV 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################