################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:32 2021 # Report_file: c_0769_16.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00329.pdb # 2: usage_00555.pdb # 3: usage_00665.pdb # 4: usage_00666.pdb # 5: usage_00667.pdb # 6: usage_00838.pdb # # Length: 103 # Identity: 3/103 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/103 ( 24.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/103 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00329.pdb 1 -----WEFGMSSKVLF--GNNLDRLNPDSRNTLTKIARALLAVD----IDKVRLEGHTDN 49 usage_00555.pdb 1 G----KTYERTYQ---LYAVR----DEELKEKLKKVLNERMDPIKKLGCKRVRISIRVKH 49 usage_00665.pdb 1 -----WEFGMSSKVLF--GNNLDRLNPDSRNTLTKIARALLAVD----IDKVRLEGHTDN 49 usage_00666.pdb 1 -----WEFGMSSKVLF--GNNLDRLNPDSRNTLTKIARALLAVD----IDKVRLEGHTDN 49 usage_00667.pdb 1 -----WEFGMSSKVLF--GNNLDRLNPDSRNTLTKIARALLAVD----IDKVRLEGHTDN 49 usage_00838.pdb 1 TEDLNMELRVFFD-----TN-KSNIKDQYKPEIAKVAEKLSEYP----NATARIEGHTDN 50 e n l K a l vR eghtdn usage_00329.pdb 50 YGDEGYNQKLSERRAESVAAVFREA-G---MPAANIEVRG--- 85 usage_00555.pdb 50 S-----DAAEEKKEAKKFAAILNKVFAELGYNDSNVTWD---G 84 usage_00665.pdb 50 YGDEGYNQKLSERRAESVAAVFREA-G---MPAANIEVRG--- 85 usage_00666.pdb 50 YGDEGYNQKLSERRAESVAAVFREA-G---MPAANIEVRG--- 85 usage_00667.pdb 50 YGDEGYNQKLSERRAESVAAVFREA-G---MPAANIEVRG--- 85 usage_00838.pdb 51 TGPRKLNERLSLARANSVKSALVNEYN---VDASRLSTQGFA- 89 n ls rA svaa a n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################