################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:16 2021 # Report_file: c_0677_119.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00217.pdb # 2: usage_00952.pdb # 3: usage_00953.pdb # 4: usage_00954.pdb # 5: usage_01126.pdb # 6: usage_01161.pdb # 7: usage_01162.pdb # 8: usage_01163.pdb # # Length: 79 # Identity: 39/ 79 ( 49.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 79 ( 49.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 79 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 LTAQWLPDVT-----DFSIHRLVLGTHT---QNHLVIASVQLPN---------------- 36 usage_00952.pdb 1 LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN---------------- 44 usage_00953.pdb 1 LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGE 60 usage_00954.pdb 1 LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGE 60 usage_01126.pdb 1 LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN---------------- 44 usage_01161.pdb 1 LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPND------------G-E 47 usage_01162.pdb 1 -TAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPND------------G-E 46 usage_01163.pdb 1 -TAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPND------------G-E 46 TAQWLPDVT DFSIHRLVLGTHT QNHLVIASVQLPN usage_00217.pdb 37 ----------KIEI----- 40 usage_00952.pdb 45 ----------KIEIEIKIN 53 usage_00953.pdb 61 FGGFGS-VSGKIEIEIKIN 78 usage_00954.pdb 61 FGGFGS-VSGKIEIEIKIN 78 usage_01126.pdb 45 ----------KIEIEIKIN 53 usage_01161.pdb 48 FGGF-GSVSGKIEIEIKIN 65 usage_01162.pdb 47 FGGF-GSVSGKIEIEIKIN 64 usage_01163.pdb 47 FGGF-GSVSGKIEIEIKIN 64 KIEI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################