################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:14 2021 # Report_file: c_1104_51.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00031.pdb # 2: usage_00068.pdb # 3: usage_00119.pdb # 4: usage_00262.pdb # 5: usage_00351.pdb # 6: usage_00352.pdb # 7: usage_00353.pdb # 8: usage_00375.pdb # 9: usage_00576.pdb # 10: usage_00905.pdb # # Length: 121 # Identity: 50/121 ( 41.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/121 ( 44.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/121 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 ----------FLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQI 50 usage_00068.pdb 1 EPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQI 60 usage_00119.pdb 1 ----------------FYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQI 44 usage_00262.pdb 1 ----------------FYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 44 usage_00351.pdb 1 ----------------FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQL 44 usage_00352.pdb 1 ----------------FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQL 44 usage_00353.pdb 1 ----------------FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQL 44 usage_00375.pdb 1 -----------------YSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQ 43 usage_00576.pdb 1 ----------------FYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 44 usage_00905.pdb 1 ----------------FYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 44 YSGF P Y KL N A I LIIRDE VHG YIGYK Q usage_00031.pdb 51 ALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNL 110 usage_00068.pdb 61 ALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMN- 119 usage_00119.pdb 45 ALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMN- 103 usage_00262.pdb 45 NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMN- 103 usage_00351.pdb 45 AFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYDTVGWTEEVKTFLRYNANKALMNL 104 usage_00352.pdb 45 AFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYDTVGWTEEVKTFLRYNANKALMNL 104 usage_00353.pdb 45 AFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYDTVGWTEEVKTFLRYNANKALMNL 104 usage_00375.pdb 44 GVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDDLGWTEDVKRFLRYNANKALNN- 102 usage_00576.pdb 45 NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMN- 103 usage_00905.pdb 45 NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMN- 103 E lK DLl LY NE YT lY W VK FL YNANKALmN usage_00031.pdb 111 G 111 usage_00068.pdb - usage_00119.pdb - usage_00262.pdb - usage_00351.pdb 105 G 105 usage_00352.pdb 105 G 105 usage_00353.pdb 105 G 105 usage_00375.pdb - usage_00576.pdb - usage_00905.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################