################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:58 2021 # Report_file: c_1261_86.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00802.pdb # 2: usage_01126.pdb # 3: usage_01127.pdb # 4: usage_02504.pdb # 5: usage_02505.pdb # 6: usage_02506.pdb # 7: usage_02507.pdb # 8: usage_02519.pdb # 9: usage_02520.pdb # 10: usage_02521.pdb # # Length: 31 # Identity: 1/ 31 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 31 ( 35.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 31 ( 9.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00802.pdb 1 STYELADVKAAVDVVQSAEKTKGKVFLTSY- 30 usage_01126.pdb 1 QVLPLEAAAEGHRLLEERRVFGKVVL-QV-G 29 usage_01127.pdb 1 QVLPLEAAAEGHRLLEERRVFGKVVL-QV-G 29 usage_02504.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02505.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02506.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02507.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02519.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02520.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 usage_02521.pdb 1 AVYPLAEAAEACRVVQTSRQVGKVAV-LC-M 29 v pL aae r r gkv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################