################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:07:38 2021 # Report_file: c_0087_7.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00002.pdb # 2: usage_00010.pdb # 3: usage_00015.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # 10: usage_00042.pdb # 11: usage_00043.pdb # 12: usage_00044.pdb # 13: usage_00045.pdb # 14: usage_00046.pdb # 15: usage_00101.pdb # 16: usage_00102.pdb # 17: usage_00105.pdb # 18: usage_00107.pdb # 19: usage_00112.pdb # # Length: 114 # Identity: 40/114 ( 35.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/114 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/114 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00010.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00015.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGTTDQGEVPN 60 usage_00027.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00028.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00031.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00032.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVSVGMTDQGEVPN 60 usage_00040.pdb 1 -VTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVPE 59 usage_00041.pdb 1 -VTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 59 usage_00042.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00043.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00044.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00045.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00046.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00101.pdb 1 GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 60 usage_00102.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00105.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00107.pdb 1 GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 60 usage_00112.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 vtQtP G Tl C Q MnH yM WYrQDPGmgL lI YS T G vp usage_00002.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 usage_00010.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSEFG--TQETQYFGPGTRLLVLE 112 usage_00015.pdb 61 GYNVSRSTIEDFPLRLLSAAPSQTSVYFCASSYLG--NTGELFFGEGSRLTVLE 112 usage_00027.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 usage_00028.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 usage_00031.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 usage_00032.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASSYVG--NTGELFFGEGSRLTVLE 112 usage_00040.pdb 60 GYKVSRKEKRNFPLILESPSPNQTSLYFCASSGA----SHEQYFGPGTRLTVTE 109 usage_00041.pdb 60 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTYH-----GTGYFGEGSWLTVVE 108 usage_00042.pdb 61 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTYH-----GTGYFGEGSWLTVVE 109 usage_00043.pdb 61 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTY-----HGTGYFGEGSWLTVVE 109 usage_00044.pdb 61 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTY-----HGTGYFGEGSWLTVVE 109 usage_00045.pdb 61 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTY-----HGTGYFGEGSWLTVVE 109 usage_00046.pdb 61 GYNVSRSTTEDFPLRLELAAPSQTSVYFCASTY-----HGTGYFGEGSWLTVVE 109 usage_00101.pdb 61 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASSPRL--AGDEQFFGPGTRLTVLE 112 usage_00102.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASREGL--GGTEAFFGQGTRLTVVE 112 usage_00105.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASSYVG--NTGELFFGEGSRLTVLE 112 usage_00107.pdb 61 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASRPRR--DN-EQFFGPGTRLTVLE 111 usage_00112.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 gy VSR F L L a PsqTS YfCAS FG G LtV E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################