################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:20 2021 # Report_file: c_1105_18.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00052.pdb # 2: usage_00290.pdb # 3: usage_00305.pdb # 4: usage_00386.pdb # 5: usage_00387.pdb # 6: usage_00388.pdb # 7: usage_00389.pdb # 8: usage_00393.pdb # 9: usage_00394.pdb # 10: usage_00757.pdb # 11: usage_00850.pdb # 12: usage_00851.pdb # 13: usage_00852.pdb # # Length: 70 # Identity: 59/ 70 ( 84.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 70 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 70 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 SPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINE 60 usage_00290.pdb 1 SPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 60 usage_00305.pdb 1 SPRTLNAWVKVVEEKAFSPEVIP-FSALSEGATPQDLNT-LNTVGGHQAA-Q-LKETINE 56 usage_00386.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00387.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00388.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00389.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00393.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00394.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00757.pdb 1 SPRTLCCWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 60 usage_00850.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00851.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 usage_00852.pdb 1 -PRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINE 59 PRTLnaWVKVVEEKAFSPEVIP FSALSeGATPQDLNT LNTVGGHQAA Q LKETINE usage_00052.pdb 61 EAAEWDRLHP 70 usage_00290.pdb 61 EAAEWDRLHP 70 usage_00305.pdb 57 EAAEWDRLH- 65 usage_00386.pdb 60 EAAEWDR--- 66 usage_00387.pdb 60 EAAEWDRLH- 68 usage_00388.pdb 60 EAAEWDRLH- 68 usage_00389.pdb 60 EAAEWDRLH- 68 usage_00393.pdb 60 EAAEWDRLHP 69 usage_00394.pdb 60 EAAEWDRL-- 67 usage_00757.pdb 61 EAAEWDRL-- 68 usage_00850.pdb 60 EAAEWDR--- 66 usage_00851.pdb 60 EAAEWDR--- 66 usage_00852.pdb 60 EAAEWDR--- 66 EAAEWDR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################