################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:35 2021 # Report_file: c_1172_110.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00043.pdb # 4: usage_00509.pdb # 5: usage_02918.pdb # 6: usage_03106.pdb # 7: usage_04253.pdb # 8: usage_04256.pdb # 9: usage_05307.pdb # 10: usage_05308.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 47 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 47 ( 61.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 ----SV---SLSK--E--AKYYQLGCRG----P-----GLPLYTLHR 27 usage_00015.pdb 1 ----SV---SLSK--E--AKYYQLGCRG----P-----GLPLYTLHR 27 usage_00043.pdb 1 QYY-SV---SFSK--E--AKYYQLRCSG----P-----GLPLYTL-- 28 usage_00509.pdb 1 QYY-SA---SFSN--K--AKYYQLRCFG----P-----GLPLYTLHS 30 usage_02918.pdb 1 -ETFEVALS---N-------KGEYSFYC----SPHQGAGMVGKVT-- 30 usage_03106.pdb 1 ----GE---YDIE-KDE---NKRYISFIPFSED-----I-HELTLTG 30 usage_04253.pdb 1 QYY-SV---SLSK--E--AKYYQLGCRG----P-----GLPLYTLHR 30 usage_04256.pdb 1 ----GW---FRQAP-GKEREFVAAISAA----PG----TAYYAFYA- 30 usage_05307.pdb 1 --Y-SA---SFSN--K--AKYYQLRCFG----P-----GLPLYTLHS 28 usage_05308.pdb 1 -YY-SA---SFSN--K--AKYYQLRCFG----P-----GLPLYTLHS 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################