################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:47:37 2021 # Report_file: c_0121_17.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00001.pdb # 2: usage_00007.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00045.pdb # 8: usage_00062.pdb # 9: usage_00081.pdb # 10: usage_00083.pdb # 11: usage_00117.pdb # 12: usage_00118.pdb # 13: usage_00134.pdb # 14: usage_00135.pdb # 15: usage_00143.pdb # 16: usage_00150.pdb # 17: usage_00155.pdb # 18: usage_00225.pdb # 19: usage_00226.pdb # 20: usage_00227.pdb # 21: usage_00265.pdb # 22: usage_00279.pdb # 23: usage_00285.pdb # 24: usage_00297.pdb # 25: usage_00298.pdb # 26: usage_00374.pdb # 27: usage_00380.pdb # 28: usage_00381.pdb # 29: usage_00382.pdb # 30: usage_00387.pdb # 31: usage_00390.pdb # 32: usage_00401.pdb # 33: usage_00450.pdb # 34: usage_00505.pdb # 35: usage_00527.pdb # # Length: 128 # Identity: 22/128 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/128 ( 26.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/128 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -VQLQESDAELVKPGASVKISCKASGYTFTD--HVIHWVKQKPEQGLEWIGYISPGNGDI 57 usage_00007.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTS--YWMHWVKQRPGRGLEWIGRIDPNSGGT 57 usage_00013.pdb 1 -VQLEESGPELVKPGASVKISCKASGYTFTD--YYMNWLRQKPGQGLEWIGWVY--PGSI 55 usage_00014.pdb 1 -VQLEESGPELVKPGASVKISCKASGYTFTD--YYMNWLRQKPGQGLEWIGWVY--PGSI 55 usage_00043.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTS--YWMHWVKQRPGRGLEWIGRIDPNGGGT 57 usage_00044.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTS--YWMHWVKQRPGRGLEWIGRIDPNGGGT 57 usage_00045.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTS--YWMHWVKQRPGRGLEWIGRIDPNGGGT 57 usage_00062.pdb 1 -VKLLESGAVLVKPGASVKLSCKTSGFTFSS--SYINWLKQKPGQSLEWIAWIYAGSGGT 57 usage_00081.pdb 1 -VQLQQSGAELARPGASVKMSCKASGYTFTS--YTMHWVKQRPGQGLEWIGYINPSSGYS 57 usage_00083.pdb 1 -VQLQESGTELVKPGASVKISCKASGYISTD--HAIHWVKQRPEQGLEWIGYISPGNGDI 57 usage_00117.pdb 1 QVQLQQSGAELVRAGSSVKMSCKASGYTFTS--YGVNWVKQRPGQGLEWIGYINPGKGYL 58 usage_00118.pdb 1 -VQLQQSGTELVMPGASVKMSCKASGYTFTD--YWMHWVKQRPGQGLEWIGSIDPSDSYT 57 usage_00134.pdb 1 -VQLQQSGAELVRPGTSVKVSCKASGYAFTN--YLIEWVKQRPGQGLEWIGVINPRSGDT 57 usage_00135.pdb 1 -VQLQQSGAELVRPGTSVKVSCKASGYAFTN--YLIEWVKQRPGQGLEWIGVINPRSGDT 57 usage_00143.pdb 1 --QLQQPGTELVKPGASVKLSCKASGYTFTG--FWIHWVKQRPGQGLEWIGHINPGNGGT 56 usage_00150.pdb 1 -VQLVQSGAELKKPGSSVKVSCKASGYIFTS--SWINWVKQAPGQGLEWIGRIDPSDGEV 57 usage_00155.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTS--DWIHWVKQRPGHGLEWIGEIIPSYGRA 56 usage_00225.pdb 1 -VLLQQSGPELVKPGASVRITCKASGYTFTD--FNMDWVKQSPGKSLEWIGDFNPNSGGS 57 usage_00226.pdb 1 -VLLQQSGPELVKPGASVRITCKASGYTFTD--FNMDWVKQSPGKSLEWIGDFNPNSGGS 57 usage_00227.pdb 1 -VQLQQPGAELVKPGTSVKLSCKASGYNFTS--YWINWVKLRPGQGLEWIGDIYPGSGIT 57 usage_00265.pdb 1 -VQLQQSGAELAEPGASVKMSCKASGYTFSS--FWMHWVKQRPGQGLEWIGYINPRSGYT 57 usage_00279.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTN--YDINWVRQRPEQGLEWIGWIFPGDGST 57 usage_00285.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTS--YWMHWVKQRPGRGLEWIGRIDPNSGGT 57 usage_00297.pdb 1 -VQLQQSGAELARPGASVKLSCKASGYTFTS--YWMQWVKQRPGQGLEWIGAIYPGDGDT 57 usage_00298.pdb 1 -VQLQQSGAELARPGASVKLSCKASGYTFTS--YWMQWVKQRPGQGLEWIGAIYPGDGDT 57 usage_00374.pdb 1 --QLQQSGAELVKPGASVKLSCKASGYTFTN--YFIYWVKQRPGQGLEWIGEINPRNGDT 56 usage_00380.pdb 1 -AYLQESGAELVRPGASVKMSCKASGYRFTS--YNMHWVKQTPRQGLEWIGAIYPGNGDT 57 usage_00381.pdb 1 -VQLQQSGPEDVKPGASVKISCKASGYSLSTSGMGVNWVKQSPGKGLEWLAHIYW-DDDK 58 usage_00382.pdb 1 -VQLQQSGPEDVKPGASVKISCKASGYSLSTSGMGVNWVKQSPGKGLEWLAHIYW-DDDK 58 usage_00387.pdb 1 -VQLEESGPELVKPGALVKISCKASGYTFTT--YDINWVKQRPGQGLEWIGWIYPGDGSN 57 usage_00390.pdb 1 -VQLVQSGAEVAKPGTSVKLSCKASGYTFTD--YWMQWVKQRPGQGLEWIGTIYPGDGDT 57 usage_00401.pdb 1 --QLKESGPELVKPGASVKMSCKASGYTFTS--YVIHWVKQRPGQGLEWIGYINPYNDGS 56 usage_00450.pdb 1 -VQLQQPGAELVQPGTSVRLSCKASGYIFTT--YWIHWVKQRPGQGLEWIGEINPNNGRI 57 usage_00505.pdb 1 -VQLQQSGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00527.pdb 1 -VQLQQSGPELVKPGASVKISCKASGYTFSS--SWMNWVKQRPGKGLEWIGRIYSGDGDA 57 L g e pG sV CKaSGy W q P LEW usage_00001.pdb 58 KYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYLCKRGYY--------V----DYWG 105 usage_00007.pdb 58 KYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYY---G--SSY-F-DYWG 110 usage_00013.pdb 56 KYNEKFKDKATLTADTSSSIVYMHLSSLTSDDNAVYFCTRWTY-------GSS-F-DYWG 106 usage_00014.pdb 56 KYNEKFKDKATLTADTSSSIVYMHLSSLTSDDNAVYFCTRWTY-------GSS-F-DYWG 106 usage_00043.pdb 58 KYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYY---G--TYY-F-DYWG 110 usage_00044.pdb 58 KYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYY---G--TYY-F-DYWG 110 usage_00045.pdb 58 KYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYY---G--TYY-F-DYWG 110 usage_00062.pdb 58 VYNQHFTDKARLTVDTSSSTAYMQFSSLTTEDSAIYYCARYRY-------DEG-F-AYWG 108 usage_00081.pdb 58 NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCSRPVVR---L--GYN-F-DYWG 110 usage_00083.pdb 58 KYNEKFKVKATLTADQSSSTAYMQLNSLTSEDSAVYFCKRSYYG-------SSYV-DYWG 109 usage_00117.pdb 59 SYNEKFKGKTTLTVDRSSSTAYMQLRSLTSEDAAVYFCARSFYGGSDL-AVYY-F-DSWG 115 usage_00118.pdb 58 SHNEKFKGKATLTVDESSSTAYMQLSSLTSEDSAVYFCSRSGY-------GYY-AMEYWG 109 usage_00134.pdb 58 NSNEKFKGKAILTADKSSSTAYMQLSSLTSDDSAVYFCARSGTT---A--YFA-M-DYWG 110 usage_00135.pdb 58 NSNEKFKGKAILTADKSSSTAYMQLSSLTSDDSAVYFCARSGTT---A--YFA-M-DYWG 110 usage_00143.pdb 57 NYNEKFKRMATLTVDKSSSTAYMQLSSLTSEDSAVYYCARSYSN---Y--VRA-M-DYWG 109 usage_00150.pdb 58 HYNQDFKDKATLTVDKSTNTAYMELSSLRSEDTAVYYCARGFL--------PW-F-ADWG 107 usage_00155.pdb 57 NYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERG-------DGY-F-AVWG 107 usage_00225.pdb 58 IYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETG-------TAW-F-AYWG 108 usage_00226.pdb 58 IYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETG-------TAW-F-AYWG 108 usage_00227.pdb 58 NYNEKFKSKATLTVDTSSSTAYMQLSSLASEDSALYYCAGQYG-------NLW-F-AYWG 108 usage_00265.pdb 58 ECNEIFRDKATMTADTSSSTAYMQLSGLTSEDSAVYYCASFLG-------RGA-M-DYWG 108 usage_00279.pdb 58 QYNEKFKGKATLTTDTSSSTAYMQLSRLTSEDSAVYFCARQTT-------ATW-F-AYWG 108 usage_00285.pdb 58 AYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYY---G--GSY-F-DYWG 110 usage_00297.pdb 58 RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARR-------------W-DYWG 103 usage_00298.pdb 58 RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARR-------------W-DYWG 103 usage_00374.pdb 57 DFNEKFESRATLTVDKSSSTAYMQLSSLTSEDSAIYYCTRSPYG---N--NYG-F-TYWG 109 usage_00380.pdb 58 SYNQKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARGRL-------SLG-F-DYWG 108 usage_00381.pdb 59 RYNPSLKSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRGGS---SH-YYA-M-DYWG 112 usage_00382.pdb 59 RYNPSLKSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRGGS---SH-YYA-M-DYWG 112 usage_00387.pdb 58 KYNEKFKDKATLTVDKSSSTAYMHLSSLTSENSAVYFCARGYGK---N--VYA-M-DYWG 110 usage_00390.pdb 58 GYAQKFQGKATLTADKSSKTVYMHLSSLASEDSAVYYCARGDYY---G--SNS-L-DYWG 110 usage_00401.pdb 57 KYNEKFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYYCARYGVR---GD-YYA-V-DYWG 110 usage_00450.pdb 58 NYNEKFKTKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRVGV-------MIT-TFPYWG 109 usage_00505.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYK---R--GYA-M-DYWG 110 usage_00527.pdb 58 IYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCAREGKT---G--DLL-L-RSWG 110 a T D s y l L d Y C WG usage_00001.pdb 106 QGTTLTVS 113 usage_00007.pdb 111 QGTTVTV- 117 usage_00013.pdb 107 EGTLLTVS 114 usage_00014.pdb 107 EGTLLTVS 114 usage_00043.pdb 111 QGTTLTVS 118 usage_00044.pdb 111 QGTTLTV- 117 usage_00045.pdb 111 QGTTLTV- 117 usage_00062.pdb 109 QGTLVTVS 116 usage_00081.pdb 111 QGSTLTVS 118 usage_00083.pdb 110 QGTTLTVS 117 usage_00117.pdb 116 QGTTLTVS 123 usage_00118.pdb 110 QGTSVTVS 117 usage_00134.pdb 111 QGTSVTVS 118 usage_00135.pdb 111 QGTSVTVS 118 usage_00143.pdb 110 QGTSVTV- 116 usage_00150.pdb 108 QGTLVTVS 115 usage_00155.pdb 108 AGTTVTVS 115 usage_00225.pdb 109 QGTLVTVS 116 usage_00226.pdb 109 QGTLVTV- 115 usage_00227.pdb 109 QGTLVTVS 116 usage_00265.pdb 109 QGTSVTVS 116 usage_00279.pdb 109 QGTLVTVS 116 usage_00285.pdb 111 QGTTLTVS 118 usage_00297.pdb 104 QGTTLTVS 111 usage_00298.pdb 104 QGTTLTVS 111 usage_00374.pdb 110 QGTLVTV- 116 usage_00380.pdb 109 QGSTLTVS 116 usage_00381.pdb 113 QGTTVTV- 119 usage_00382.pdb 113 QGTTVTVS 120 usage_00387.pdb 111 QGTSVTVS 118 usage_00390.pdb 111 QGTSVTVS 118 usage_00401.pdb 111 QGTSVTVS 118 usage_00450.pdb 110 QGTLVTVS 117 usage_00505.pdb 111 QGTSVTVS 118 usage_00527.pdb 111 QGSALTVS 118 G TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################