################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:03 2021 # Report_file: c_0390_16.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00041.pdb # 2: usage_00079.pdb # 3: usage_00091.pdb # 4: usage_00098.pdb # 5: usage_00115.pdb # 6: usage_00125.pdb # 7: usage_00128.pdb # 8: usage_00299.pdb # # Length: 103 # Identity: 15/103 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/103 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/103 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ----------PVVNSGGNVTLQCDSQVAFDGFILCKEGEHPQCLNSQPHA------RGSS 44 usage_00079.pdb 1 --PTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEHPQCLNS--QPHARG----SS 52 usage_00091.pdb 1 PKPTLSAQPSPVVTSGGRVTLQCESQVAFGGFILCKE----QCLNSQPHA----R-G-SS 50 usage_00098.pdb 1 ---SLSVQPGPVMAPGESLTLQCVSDVGYDRFVLYKEG-ERDLRQLPGRQP----QAGLS 52 usage_00115.pdb 1 ----------PLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHH-----DGVS 45 usage_00125.pdb 1 IKPTLSAQPSPVVNSGGNVILQCDSQVAFDGFSLCKE----QCLNSQPHAR------GSS 50 usage_00128.pdb 1 ---SLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREG-EAHELRLPAVPS----INGTF 52 usage_00299.pdb 1 ----------PVVNSGGNVTLQCDSQVAFDGFILCKEGE--QCLNS-------------- 34 P v g v LqC S v f f L E l usage_00041.pdb 45 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG 87 usage_00079.pdb 53 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLEL---- 91 usage_00091.pdb 51 RAIFSVGPVSPNRRWSHRCYGYDLNSPYVWSSPSDLLEL---- 89 usage_00098.pdb 53 QANFTLGPVSRSYGGQYRCYGAHNLS-SECSAPSDPLDIL--- 91 usage_00115.pdb 46 KANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIV--- 85 usage_00125.pdb 51 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL- 92 usage_00128.pdb 53 QADFPLGPATH--GETYRCFGSFHGSPYEWSDASDPLPVSVT- 92 usage_00299.pdb 35 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG 77 A F gp yRCy S y S pSD L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################