################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:15 2021 # Report_file: c_0708_48.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00229.pdb # 2: usage_00230.pdb # 3: usage_00365.pdb # 4: usage_00403.pdb # 5: usage_00483.pdb # # Length: 67 # Identity: 21/ 67 ( 31.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 67 ( 44.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 67 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00229.pdb 1 CKVPIEIRDVN--KEKVVGRIISSTPLAE--NTNSVTNIELEPPFGDSYIVIGVGNSALT 56 usage_00230.pdb 1 CKVPIEIRDVN--KEKVVGRIISSTPLAE--NTNSVTNIELEPPFGDSYIVIGVGNSALT 56 usage_00365.pdb 1 --VPISSVAS-LNDLTPVGRLVTVNPFVSVATANAKVLIELEPPFGDSYIVVGRGEQQIN 57 usage_00403.pdb 1 ---PIEIRDVN--KEKVVGRIISSTPFAE--YTNSVTNIELEPPFGDSYIVIGVGDSALT 53 usage_00483.pdb 1 CKVPAQMAVD-MQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKIT 59 Pi VGR i P Ns iELePPFGDSYIViGvG t usage_00229.pdb 57 LHWFRK- 62 usage_00230.pdb 57 LHWFRK- 62 usage_00365.pdb 58 HHWHKS- 63 usage_00403.pdb 54 LHWFRKH 60 usage_00483.pdb 60 HHWHRSG 66 HW r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################