################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:48 2021 # Report_file: c_1488_146.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00727.pdb # 2: usage_06538.pdb # 3: usage_06551.pdb # 4: usage_06556.pdb # 5: usage_07537.pdb # 6: usage_07620.pdb # 7: usage_08661.pdb # # Length: 21 # Identity: 5/ 21 ( 23.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 21 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 21 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00727.pdb 1 NEGTYLKAWEKIACSVFDAF- 20 usage_06538.pdb 1 NEGNYKTKWDDIMHRVYDAFG 21 usage_06551.pdb 1 NEGNYKTKWDDIMHRVYDAF- 20 usage_06556.pdb 1 NEGNYKTKWDDIMHRVYDAF- 20 usage_07537.pdb 1 NEGTYLKAWEKIACSVFDAF- 20 usage_07620.pdb 1 DADKYVQAWNSIMANVYEAFQ 21 usage_08661.pdb 1 NEGNYKTKWDDIMHRVYDA-- 19 neg Y W I V dA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################