################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:54 2021 # Report_file: c_1219_63.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00496.pdb # 2: usage_00674.pdb # 3: usage_00781.pdb # 4: usage_01012.pdb # 5: usage_01154.pdb # 6: usage_01300.pdb # 7: usage_01493.pdb # 8: usage_01494.pdb # 9: usage_01621.pdb # 10: usage_01685.pdb # 11: usage_01999.pdb # # Length: 60 # Identity: 2/ 60 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 60 ( 38.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 60 ( 61.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00496.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_00674.pdb 1 D-IKTCDHYQNFPLYLGGETH-EHYGIPHGFSSRI--ALERYLNG--------------- 41 usage_00781.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_01012.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_01154.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIE-- 40 usage_01300.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_01493.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_01494.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIEDM 42 usage_01621.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIED- 41 usage_01685.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKAIED- 41 usage_01999.pdb 1 -GPRRA---------------NGIQGLRFIIQS--EKPPHYLESRVEAFLITMEKSIEDM 42 prra giqGlrfiiqS pphylesr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################