################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:57 2021 # Report_file: c_1258_100.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00079.pdb # 2: usage_00201.pdb # 3: usage_00203.pdb # 4: usage_00249.pdb # 5: usage_00364.pdb # 6: usage_00399.pdb # 7: usage_00568.pdb # 8: usage_00576.pdb # 9: usage_00659.pdb # 10: usage_00716.pdb # 11: usage_01031.pdb # 12: usage_01040.pdb # 13: usage_01052.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 54 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 54 ( 61.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 GDEI--TGVNGRSIKGKTKVEVAKMIQE-----VK---GEVTIHYNKL------ 38 usage_00201.pdb 1 GDFL--IEVNGQNVVKVGHRQVVNMIRQ-----GG---NTLMVKVVMVTRHPDM 44 usage_00203.pdb 1 ----GL--------PNLGFDFYLKYASDLHDYSKK--PLFLSISGL-------- 32 usage_00249.pdb 1 EDVI--IEVNGVNVLDEPYEKVVDRIQS-----SG---KNVTLLVCG------- 37 usage_00364.pdb 1 -DRL--VEVNGENVEKETHQQVVSRIRA-----AL---NAVRLLVVD------- 36 usage_00399.pdb 1 GTEL--KAVDGIETP--DWDAVRLQLVD-----KIGD-ESTTITVAPF------ 38 usage_00568.pdb 1 GDRL--VEVNGENVEKETHQQVVSRIRA-----AL---NAVRLLVVD------- 37 usage_00576.pdb 1 ------VEVNGVDFSNLDHKEAVNVLKS-----SR---SL-TISIV-------- 31 usage_00659.pdb 1 GDFL--IEVNGQNVVKVGHRQVVNMIRQ-----GG---NTLMVKVVMVTR---- 40 usage_00716.pdb 1 GDRI--LEVNGVNVEGATHKQVVDLIRA-----GE---KELILTVLSV------ 38 usage_01031.pdb 1 GDRL--VEVNGVNVEGETHHQVVQRIKA-----VE---GQTRLLVVDQM----- 39 usage_01040.pdb 1 ------IKVNGTMVTNSSHLEVVKLIKS-----GA---YV-ALTLLG------- 32 usage_01052.pdb 1 GDRI--LEVNGVNVEGATHKQVVDLIRA-----GE---KELILTVLSV------ 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################