################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:52 2021 # Report_file: c_1120_68.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00106.pdb # 2: usage_00264.pdb # 3: usage_00340.pdb # 4: usage_00341.pdb # 5: usage_00375.pdb # 6: usage_00466.pdb # 7: usage_00559.pdb # 8: usage_00617.pdb # 9: usage_00618.pdb # # Length: 97 # Identity: 10/ 97 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 97 ( 54.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 97 ( 44.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 ---------TPFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 45 usage_00264.pdb 1 AEMSSQLHLTPFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 54 usage_00340.pdb 1 ----------PFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 44 usage_00341.pdb 1 ----------PFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 44 usage_00375.pdb 1 -----------SPYQDVVRTVGNAQ----TDQCPSYGRLIGLISFGGFVAAKE---SVEL 42 usage_00466.pdb 1 -------------ARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 41 usage_00559.pdb 1 ---------TPFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 45 usage_00617.pdb 1 ---------TPFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 45 usage_00618.pdb 1 ----------PFTARGRFATVVEELFRDG----VNWGRIVAFFEFGGVMCVESVNR--EM 44 argrfaTVveel vnwGRivaffeFGGvmcves Em usage_00106.pdb 46 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVEL- 80 usage_00264.pdb 55 SPLVDNIALWMTEYLNRHLH----------------- 74 usage_00340.pdb 45 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVELY 80 usage_00341.pdb 45 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVELY 80 usage_00375.pdb 43 QGQVRNLFVYTSLFIKTRIRNNWKEHNRSWDDFTL-- 77 usage_00466.pdb 42 SPLVDNIAIWMTEYLNRHLHTWIQDNG-GWDAFVEL- 76 usage_00559.pdb 46 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVELY 81 usage_00617.pdb 46 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVEL- 80 usage_00618.pdb 45 SPLVDNIALWMTEYLNRHLHTWIQDNG-GWDAFVELY 80 splVdNia wmteylnrhlh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################