################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:04:57 2021 # Report_file: c_0769_31.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00044.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # 4: usage_00254.pdb # 5: usage_00304.pdb # 6: usage_00420.pdb # 7: usage_00421.pdb # 8: usage_00486.pdb # 9: usage_00560.pdb # 10: usage_00567.pdb # 11: usage_00687.pdb # 12: usage_00689.pdb # 13: usage_00816.pdb # 14: usage_00817.pdb # 15: usage_00818.pdb # 16: usage_00819.pdb # 17: usage_00820.pdb # 18: usage_00821.pdb # 19: usage_00915.pdb # 20: usage_00917.pdb # 21: usage_00984.pdb # 22: usage_00986.pdb # 23: usage_00997.pdb # 24: usage_00999.pdb # # Length: 101 # Identity: 12/101 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/101 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/101 ( 34.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 -----MPGFAPLTSRG-SQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 54 usage_00086.pdb 1 --HFLMCAFAPLTPPD-RSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGI 57 usage_00087.pdb 1 ----LTASFAPM------------NFPDLARETFAQDNFTAAIDWQQGVYLAASALFRGD 44 usage_00254.pdb 1 --HFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 49 usage_00304.pdb 1 -LHFFMPGFAPLTS---------LTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGR 50 usage_00420.pdb 1 RLHFFMPGFAPLTSRG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGR 59 usage_00421.pdb 1 ---FFMPGFAPLTSRG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGR 56 usage_00486.pdb 1 ---FFMPGFAPLTSRGSQQYRA-LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 56 usage_00560.pdb 1 -----MPGFAPLTSRG-SQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 54 usage_00567.pdb 1 --HFFMPGFAPL-----------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 47 usage_00687.pdb 1 --HFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 49 usage_00689.pdb 1 --HFFMPGFAPLTSRG-SQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 57 usage_00816.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00817.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00818.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00819.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00820.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00821.pdb 1 --HFFMPGFAPLTARG-SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 57 usage_00915.pdb 1 --HFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 49 usage_00917.pdb 1 --HFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 49 usage_00984.pdb 1 RLHFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 51 usage_00986.pdb 1 RLHFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 51 usage_00997.pdb 1 --HFFMPGFAPLTS---------LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 49 usage_00999.pdb 1 --HFFMPGFAPLTSRG-SQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGR 57 m FAPl pel Fd n AAcdp GryL a fRG usage_00044.pdb 55 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 89 usage_00086.pdb 58 MEDKPLADAALAAMREKL-P---L-T--IPTAFKIGYVE-- 89 usage_00087.pdb 45 -----DVDENMATIRKSLN--YASYMPASG-GLKLGYAE-- 75 usage_00254.pdb 50 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 84 usage_00304.pdb 51 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 85 usage_00420.pdb 60 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 94 usage_00421.pdb 57 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-I 92 usage_00486.pdb 57 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 91 usage_00560.pdb 55 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 89 usage_00567.pdb 48 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 82 usage_00687.pdb 50 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 84 usage_00689.pdb 58 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCDI- 93 usage_00816.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00817.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00818.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00819.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00820.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00821.pdb 58 M-SMKEVDEQMLAIQSKNSSYFVEWI--PN-NVKVAVCD-- 92 usage_00915.pdb 50 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 84 usage_00917.pdb 50 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAVCD-- 84 usage_00984.pdb 52 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAV---- 84 usage_00986.pdb 52 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAV---- 84 usage_00997.pdb 50 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAV---- 82 usage_00999.pdb 58 M-SMKEVDEQMLNVQNKNSSYFVEWI--PN-NVKTAV---- 90 vDe m k K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################