################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:29 2021 # Report_file: c_1011_49.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00138.pdb # 4: usage_00162.pdb # 5: usage_00425.pdb # 6: usage_00589.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 60 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 60 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 LEVIIKAKVK---PTEDKYKVKKAILNIFP----KA-KLTFIEK-DNEFGEWEGKTK--- 48 usage_00039.pdb 1 LEVIIKAKVK---PTEDKYKVKKAILNIFP----KA-KLTFIEK-DNEFGEWEGKTK--- 48 usage_00138.pdb 1 -FNLFIGNLN---PNKSVAELKVAISELFAKNDLAVVDVRTGT----NRKFGYVD----- 47 usage_00162.pdb 1 IHELFKVRVKRIE---TAYKMVTHFEKLG-----LK-IEIVDIEEIKDGWRITFKRLY-- 49 usage_00425.pdb 1 ----LHVTFP---KEWKTSDLYQLFSA-F------G-NIQISWI-DDTSAFVSLSQP-EQ 43 usage_00589.pdb 1 -EIEIRTKIH---PTESEDKVLKAIRNIFP----DA-EIEISEE---GEVYGRAYS---- 44 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################