################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:37 2021 # Report_file: c_0121_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00103.pdb # 2: usage_00104.pdb # 3: usage_00105.pdb # 4: usage_00233.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00325.pdb # 8: usage_00326.pdb # 9: usage_00395.pdb # 10: usage_00396.pdb # 11: usage_00455.pdb # 12: usage_00456.pdb # # Length: 118 # Identity: 85/118 ( 72.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/118 ( 72.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/118 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 VQLVQSGAEVKKPGSSVKVSCKASGYTFTTYYLHWVRQAPGQGLEWMGWIYPGNVHAQYN 60 usage_00104.pdb 1 VQLVQSGAEVKKPGSSVKVSCKASGYTFTTYYLHWVRQAPGQGLEWMGWIYPGNVHAQYN 60 usage_00105.pdb 1 VQLVQSGAEVKKPGESVKVSCKASGYTFTTYYLHWVRQAPGQGLEWMGWIYPGNVHAQYN 60 usage_00233.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00234.pdb 1 -QLVQSGVEVKKPGASVKVSCKAS-YTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 58 usage_00235.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00325.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00326.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00395.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00396.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00455.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 usage_00456.pdb 1 VQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFN 60 QLVQSG EVKKPG SVKVSCKAS YTFT YY WVRQAPGQGLEWMG I P N N usage_00103.pdb 61 EKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARSW----EGFPYWGQGTTVTVS 114 usage_00104.pdb 61 EKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARSW----EGFPYWGQGTTVTVS 114 usage_00105.pdb 61 EKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARSW----EGFPYWGQGTTVTVS 114 usage_00233.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00234.pdb 59 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 116 usage_00235.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTV- 117 usage_00325.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00326.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00395.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00396.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00455.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 usage_00456.pdb 61 EKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVS 118 EKFK RVT T D ST TAYMEL SL DTAVYYCAR GF YWGQGTTVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################