################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:11 2021 # Report_file: c_1414_17.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00068.pdb # 2: usage_00097.pdb # 3: usage_00099.pdb # 4: usage_00109.pdb # 5: usage_00128.pdb # 6: usage_00166.pdb # 7: usage_00222.pdb # 8: usage_00228.pdb # 9: usage_00314.pdb # 10: usage_00318.pdb # 11: usage_00323.pdb # 12: usage_00324.pdb # 13: usage_00331.pdb # 14: usage_00335.pdb # 15: usage_00479.pdb # 16: usage_00511.pdb # 17: usage_00586.pdb # # Length: 65 # Identity: 7/ 65 ( 10.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 65 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 65 ( 36.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 SKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEK-K--------- 50 usage_00097.pdb 1 TRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWK-K-EH------ 52 usage_00099.pdb 1 TRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWK-K-EH------ 52 usage_00109.pdb 1 TELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK----------- 49 usage_00128.pdb 1 SNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR-R-SG------ 52 usage_00166.pdb 1 -RYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMK------------- 46 usage_00222.pdb 1 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM-------------- 46 usage_00228.pdb 1 -RYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWK-K-E------- 50 usage_00314.pdb 1 TKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMK----------- 49 usage_00318.pdb 1 TSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK-R-IK------ 52 usage_00323.pdb 1 TSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNR---------------- 44 usage_00324.pdb 1 TSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK-RIKA------ 53 usage_00331.pdb 1 TKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKM--------- 51 usage_00335.pdb 1 TSEQLLELRKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNERAKWK-R-IK------ 52 usage_00479.pdb 1 TRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK-K-EIQA---- 54 usage_00511.pdb 1 TRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK-K-EIQAIKEL 58 usage_00586.pdb 1 TRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQ------------------ 42 Q eLek f y R a l L e Q k WfQ usage_00068.pdb ----- usage_00097.pdb ----- usage_00099.pdb ----- usage_00109.pdb ----- usage_00128.pdb ----- usage_00166.pdb ----- usage_00222.pdb ----- usage_00228.pdb ----- usage_00314.pdb ----- usage_00318.pdb ----- usage_00323.pdb ----- usage_00324.pdb ----- usage_00331.pdb ----- usage_00335.pdb ----- usage_00479.pdb ----- usage_00511.pdb 59 NEQEK 63 usage_00586.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################