################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:35 2021 # Report_file: c_0785_61.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00113.pdb # 4: usage_00220.pdb # 5: usage_00281.pdb # 6: usage_00309.pdb # 7: usage_00429.pdb # 8: usage_00632.pdb # 9: usage_00798.pdb # # Length: 111 # Identity: 1/111 ( 0.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/111 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/111 ( 28.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -AGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMA---KGGAIVTFSS-QAGR 55 usage_00012.pdb 1 -AGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMA---KGGAIVTFSS-QAGR 55 usage_00113.pdb 1 -AGG-GGPKP-FDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISS-MAGE 55 usage_00220.pdb 1 -AGV-APSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACS-QAGH 57 usage_00281.pdb 1 -AGI-LLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE--TGGSIINMAS-VSSW 55 usage_00309.pdb 1 -AGL-SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGS-VSGL 56 usage_00429.pdb 1 TVGK-VLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITIATSLLAA 56 usage_00632.pdb 1 -ASI-VPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIAS-NTFF 57 usage_00798.pdb 1 -----NVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGA-TASL 53 n m G usage_00011.pdb 56 DGG-GPGALAYATSK---GAVMTFTRGLAKEVGPKIR--VNAVCPG----- 95 usage_00012.pdb 56 DGG-GPGALAYATSK---GAVMTFTRGLAKEVGPKIR--VNAVCPGMISTT 100 usage_00113.pdb 56 N-T-NVRMASYGSSK---AAVNHLTRNIAFDVGPMGI--RVNAIAPG---- 95 usage_00220.pdb 58 V-G-NPELAVYSSSK---FAVRGLTQTAARDLAPLGI--TVNGYCPG---- 97 usage_00281.pdb 56 L-P-IEQYAGYSASK---AAVSALTRAAALSCRKQGYAIRVNSIHPD---- 97 usage_00309.pdb 57 W-G-IGNQANYAASK---AGVIGMARSIARELSKANV--TANVVAPG---- 96 usage_00429.pdb 57 Y-TGF----------YSTAPVEHYTRAASKELMKQQI--SVNAIAPG---- 90 usage_00632.pdb 58 A-G-TPNMAAYVAAK---GGVIGFTRALATELGKYNI--TANAVTPG---- 97 usage_00798.pdb 54 R-G-GSGFAAFASAK---FGLRAVAQSMARELMPKNI--HVAHLIID---- 93 v a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################