################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:42 2021 # Report_file: c_0271_23.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00189.pdb # 2: usage_00192.pdb # 3: usage_00258.pdb # 4: usage_00269.pdb # 5: usage_00279.pdb # # Length: 307 # Identity: 10/307 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 112/307 ( 36.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 193/307 ( 62.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00189.pdb 1 ---------------------------------------------EDTLRLCLDIVPYFL 15 usage_00192.pdb 1 --------------------------------------------KEDTLRLCLDIVPYFL 16 usage_00258.pdb 1 ---------------------------------------------EDTLRLCLDIVPYFL 15 usage_00269.pdb 1 YIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGSAATSGFEFSKEDTLRLCLDIVPYFL 60 usage_00279.pdb 1 ------------------------------------------------VLAMTMSGEREC 12 lrlcldivpyfl usage_00189.pdb 16 KHN---------------------------GEEDAVDLLLEIE--SIDKLPQFVDEN--- 43 usage_00192.pdb 17 KHN---------------------------GEEDAVDLLLEIE--SIDKLPQFVDEN--- 44 usage_00258.pdb 16 KHN---------------------------GEEDAVDLLLEIE--SIDKLPQFVDEN--- 43 usage_00269.pdb 61 KHN---------------------------GEEDAVDLLLEIE--SIDKLPQFVDEN--- 88 usage_00279.pdb 13 LKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPL-LTLVKEIVPYNMAH 71 khn geEdavdllleiE idklpqfVdeN usage_00189.pdb 44 -TFQRVCQYMVACVPLL-----PPPEDVAFLKTAYSIYLSQN-----------ELTDAIA 86 usage_00192.pdb 45 -TFQRVCQYMVACVPLL-----PPPEDVAFLKTAYSIYLSQN-----------ELTDAIA 87 usage_00258.pdb 44 -TFQRVCQYMVACVPLL-----PPPEDVAFLKTAYSIYLSQN-----------ELTDAIA 86 usage_00269.pdb 89 -TFQRVCQYMVACVPLL-----PPPEDVAFLKTAYSIYLSQN-----------ELTDAIA 131 usage_00279.pdb 72 NAEHEACDLLMEIEQVDMLEKD----IDENAYAKVCLYLTSCVNYVPEPENSALLRCALG 127 tfqrvCqymvacvpll dvaflktaysiYLsqn eLtdAia usage_00189.pdb 87 LAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYE----GVQDIIGN-G----- 136 usage_00192.pdb 88 LAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTS-------------FEYE------ 128 usage_00258.pdb 87 LAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYE----GVQDIIGN-G----- 136 usage_00269.pdb 132 LAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTS-------------FE-------- 170 usage_00279.pdb 128 VFRKFSRFPEALRLALMLNDMELVEDIFTSCK-D--VVVQKQMAFMLGRHGVF-LELSED 183 lavrlgeedmirsvfdatsDpvmhkqlayila q s usage_00189.pdb 137 --KLSEHFLYLAK-ELNLTGP-------KVPEDIYKS-HLDNSKSVFSSAGLDSAQQNLA 185 usage_00192.pdb 129 ---------GVQDIIGNG-KLSEHFLYLAKELNLTGP----------------------- 155 usage_00258.pdb 137 --KLSEHFLYLAK-ELNLTGP-------KVPEDIYKS-HLDNSKSVFSSAGLDSAQQNLA 185 usage_00269.pdb 171 -------------------------------------Y---------------------- 171 usage_00279.pdb 184 VE----------E-YEDLT-E-------IMSNVQLNS-N--------------------- 202 usage_00189.pdb 186 SSFVNGF 192 usage_00192.pdb ------- usage_00258.pdb 186 SSFVNGF 192 usage_00269.pdb ------- usage_00279.pdb ------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################