################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:46 2021 # Report_file: c_0535_11.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00051.pdb # 2: usage_00068.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # # Length: 119 # Identity: 22/119 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/119 ( 81.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/119 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -------RLSYIARVDRIISKYLTEHLSALEISLPQFTALSVLAAK-PNLSNAKLAERSF 52 usage_00068.pdb 1 LEHLLWV---NITQVKHSIERAWTRELKSLNLSTEKFAILHELMCLGGESTPHTLARRIV 57 usage_00078.pdb 1 -------RLSYIARVDRIISKYLTEHLSALEISLPQFTALSVLAAK-PNLSNAKLAERSF 52 usage_00079.pdb 1 -------RLSYIARVDRIISKYLTEHLSALEISLPQFTALSVLAAK-PNLSNAKLAERSF 52 yIarVdriIskylTehLsaLeiSlpqFtaLsvLaak pnlsnakLAeRsf usage_00051.pdb 53 IKPQSANKILQDLLANGWIEKAPD--R--RILVTVTPSGLDKLNQCNQVVQQLEAQLQ- 106 usage_00068.pdb 58 FEPHSVSAIVSRMEKDGLIIKTKDL-KKHMVRIKLSEKAIDTFYQALEISNRVYKQM-M 114 usage_00078.pdb 53 IKPQSANKILQDLLANGWIEKAPDPTH--RILVTVTPSGLDKLNQCNQVVQQLEAQ--- 106 usage_00079.pdb 53 IKPQSANKILQDLLANGWIEK--------RILVTVTPSGLDKLNQCNQVVQQLEAQ--- 100 ikPqSankIlqdllanGwIeK rilvtvtpsglDklnQcnqvvqqleaQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################