################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:25:43 2021 # Report_file: c_0686_15.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00058.pdb # 2: usage_00070.pdb # 3: usage_00071.pdb # 4: usage_00077.pdb # 5: usage_00085.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00181.pdb # 9: usage_00182.pdb # 10: usage_00193.pdb # 11: usage_00452.pdb # 12: usage_00603.pdb # 13: usage_00788.pdb # 14: usage_00799.pdb # 15: usage_00810.pdb # # Length: 50 # Identity: 8/ 50 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 50 ( 24.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 50 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 ---FPGNMDNNSHKKNIFETPFQARFVRIQPVA--WH-NRITLRVELLG- 43 usage_00070.pdb 1 -KIFEGNTNTKGHVKNFFNPPIISRFIRVIPKT--WN-QSITLRLELFG- 45 usage_00071.pdb 1 -KIFEGNTNTKGHVKNFFNPPIISRFIRVIPKT--WN-QSITLRLELFG- 45 usage_00077.pdb 1 VKVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 46 usage_00085.pdb 1 -KSFEGNNNYDTPELRTF-PALSTRFIRIYPER--ATHGGLGLRMELLG- 45 usage_00178.pdb 1 -KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 usage_00179.pdb 1 -KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 usage_00181.pdb 1 -KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 usage_00182.pdb 1 -KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 usage_00193.pdb 1 VMYFGGNSDASTIKENQIDPPVVARYIRISPTG--SY-NKPALRLELQG- 46 usage_00452.pdb 1 -EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRV--MSVCLRVELYG- 46 usage_00603.pdb 1 -MHFEGNSDGTTVKENHIDPPIIARYIRLHPTK--FY-NRPTFRIELLG- 45 usage_00788.pdb 1 -MVFFGNVDSSGIKHNIFNPPIIARYIRLHPTH--YS-IRSTLRMELMGC 46 usage_00799.pdb 1 -KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 usage_00810.pdb 1 -KVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQS--WV-HQIALRMEVLG- 45 f GN pp R R P lR E G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################