################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:47 2021 # Report_file: c_1085_84.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00086.pdb # 2: usage_00088.pdb # 3: usage_00373.pdb # 4: usage_00376.pdb # 5: usage_00399.pdb # 6: usage_00411.pdb # 7: usage_00626.pdb # 8: usage_00631.pdb # # Length: 69 # Identity: 1/ 69 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 69 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 69 ( 37.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 ---NFDETLG-----------QH---PLVLVDFWAE-W-CAP-C-R-IAPILEEIAKEYE 38 usage_00088.pdb 1 -EATVDDFIA-----------HS--GKIVVLFFRGDAVRFPE-A-ADLAVVLPELINAFP 44 usage_00373.pdb 1 TKAEFLAKVYNFEKNPEEWKYEG--DKPAIVDFYAD-W-CGP-C-KMVAPILDELAKEYD 54 usage_00376.pdb 1 -DSEFDNKVT-----------SCNDNILILVDFWAP-W-CGPCRS-L-EPQLEKLAQQYT 44 usage_00399.pdb 1 ---NFDEVIK-----------KN--NKVVVVDFWAE-W-CGP-C-RMIAPIIEELAKEYA 40 usage_00411.pdb 1 DKADLDGQLT-----------KAS-GKLVVLDFFAT-W-CGP-C-KMISPKLVELSTQFA 44 usage_00626.pdb 1 NSSNFDETLK-----------NN---ENVVVDFWAE-W-CHP-C-KMIAPVIEELAKEYA 42 usage_00631.pdb 1 NDDTFKNVVL-----------ES--SVPVLVDFWAP-W-CGP-C-RIIAPVVDEIAGEYK 43 dF a w c p p e usage_00086.pdb 39 GKLLVAK-- 45 usage_00088.pdb 45 GRLVAAE-- 51 usage_00373.pdb 55 GQIVIYKVD 63 usage_00376.pdb 45 ENVKIYK-- 51 usage_00399.pdb 41 GKVVFGK-- 47 usage_00411.pdb 45 DNVVVLK-- 51 usage_00626.pdb 43 GKVVFGK-- 49 usage_00631.pdb 44 DKLKCVK-- 50 k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################