################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:07 2021 # Report_file: c_0168_17.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00015.pdb # 2: usage_00019.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00034.pdb # 6: usage_00035.pdb # 7: usage_00078.pdb # 8: usage_00093.pdb # 9: usage_00094.pdb # 10: usage_00104.pdb # 11: usage_00112.pdb # 12: usage_00116.pdb # 13: usage_00202.pdb # # Length: 206 # Identity: 8/206 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/206 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 83/206 ( 40.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 NTLVCYSYSKSLSLPGERIGYVLVPDEVYD-KAELYAAVCGAGRALG-YVCA-PSLFQKI 57 usage_00019.pdb 1 -TLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSRQS--TTSP-DTIAQWA 49 usage_00032.pdb 1 HTLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSSQS--TTSP-DTIAQWA 50 usage_00033.pdb 1 HTLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSSQS--TTSP-DTIAQWA 50 usage_00034.pdb 1 HTLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSSQS--TTSP-DTIAQWA 50 usage_00035.pdb 1 HTLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSSQS--TTSP-DTIAQWA 50 usage_00078.pdb 1 -CYVINSFSKYFS-TGWRVGW-V-------VPEDQVRVVERIAQN---FI-CAPHASQVA 46 usage_00093.pdb 1 HTLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSRQS--TTSP-DTIAQWA 50 usage_00094.pdb 1 -TITVNGFSKTFAMTGWRLGFVAA-------PSWIIERMVKFQMYN--ATCP-VTFIQYA 49 usage_00104.pdb 1 -AVEFFTLSKSYNMAGWRIGFMVG-------NPELVSALARIKSYHDY-------PLQVA 45 usage_00112.pdb 1 --ILISGLSKSHAMTGWRLGLIFA-------PAVLTAQLIKSHQYL--VTAA-TTSVQFA 48 usage_00116.pdb 1 -TLTVNGAAKAFAMTGWRIGYACG-------PKEVIKAMASVSRQS--TTSP-DTIAQWA 49 usage_00202.pdb 1 -TITIGSAGKTFSVTGWKLGWSIG-------PAHLIKHLQTVQQNS--FYTC-ATPLQAA 49 K Gwr G Q a usage_00015.pdb 58 -VK---------------CQGATG--DINAYKENRDLLYEGLTRIGY-HCFKPDGAFYFV 98 usage_00019.pdb 50 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 99 usage_00032.pdb 51 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 100 usage_00033.pdb 51 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 100 usage_00034.pdb 51 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 100 usage_00035.pdb 51 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 100 usage_00078.pdb 47 ALAAL-D-----------CDAEL-QANLDVYKANRKL-LERLPKAGFTRIAPPDGAFYVY 92 usage_00093.pdb 51 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 100 usage_00094.pdb 50 AAKALKD---------ERSWKAV-EEMRKEYDRRRKLVWKRLNEMGL-PTVKPKGAFYIF 98 usage_00104.pdb 46 AIAALEG-----------DQQCV-RDIARQYQQRRDVLVKGLREAGW-MVENPKASMYVW 92 usage_00112.pdb 49 AIEALTN-----------GKDDA-LPMKEEYIKRRDYIIEKMEAMKF-KIIKPDGAFYIF 95 usage_00116.pdb 50 TLEALTN----Q----EASRAFV-EMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVL 99 usage_00202.pdb 50 LAEAFWIDIKRMDDPE----CYF-NSLPKELEVKRDRMVRLLNSVGL-KPIVPDGGYFII 103 y R l g P g y usage_00015.pdb 99 KA-----LED----------DSNAFCEKAKEE-DVLIVAADGFG--------CPGWVRIS 134 usage_00019.pdb 100 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 138 usage_00032.pdb 101 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 139 usage_00033.pdb 101 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 139 usage_00034.pdb 101 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 139 usage_00035.pdb 101 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 139 usage_00078.pdb 93 ADVS-D-LTD----------DSRAFAAEILEKAGVAVTPGLDFD----P-ERGAGTLRFS 135 usage_00093.pdb 101 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 139 usage_00094.pdb 99 PRIR-D-TGL----------TSKKFSELMLKEARVAVVPGSAFG----K-A-GEGYVRIS 140 usage_00104.pdb 93 AKIPEPYAHL----------GSLEFAKKLLQDAKVSVSPGIGFG----D-Y-GDDHVRFA 136 usage_00112.pdb 96 AKIPVAQG-Q----------DSFKFLQDFAKEKAVAFIPGVAFG----K-Y-GEGYLRIS 138 usage_00116.pdb 100 MDTS-P-IAP----------DEVRAAERLLE-AGVAVVPGTDFA--------AFGHVRLS 138 usage_00202.pdb 104 ADVS-S-LGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPH-FEKLVRFC 160 v p F R usage_00015.pdb 135 YCVDREIKH----SPAFEKIYKKYNK 156 usage_00019.pdb 139 YATSEEN--LRKALERFARVL----- 157 usage_00032.pdb 140 YATSEEN--LRKALERFARVL----- 158 usage_00033.pdb 140 YATSEEN--LRKALERFARVL----- 158 usage_00034.pdb 140 YATSEEN--LRKALERFARVL----- 158 usage_00035.pdb 140 YATSEEN--LRKALERFARVL----- 158 usage_00078.pdb 136 YARATAD--IEEGLDRLEAFQAR--- 156 usage_00093.pdb 140 YATSEEN--LRKALERFARVL----- 158 usage_00094.pdb 141 YATAYEK--LEEAMDRMERVLKERK- 163 usage_00104.pdb 137 LIENRDR--LRQAVRGIKAMFRADG- 159 usage_00112.pdb 139 YAASMET--IKEAMKRLKEFME---- 158 usage_00116.pdb 139 YATSEEN--LRKALERFARVL----- 157 usage_00202.pdb 161 FIKKDST--LDAAEEIFRAW------ 178 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################