################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:35:00 2021 # Report_file: c_1484_124.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00499.pdb # 2: usage_00813.pdb # 3: usage_00848.pdb # 4: usage_00852.pdb # 5: usage_01385.pdb # 6: usage_01395.pdb # 7: usage_01423.pdb # 8: usage_01424.pdb # 9: usage_01435.pdb # 10: usage_01458.pdb # 11: usage_01488.pdb # 12: usage_01497.pdb # 13: usage_01501.pdb # 14: usage_01503.pdb # 15: usage_01648.pdb # 16: usage_01655.pdb # 17: usage_01656.pdb # 18: usage_01657.pdb # 19: usage_01658.pdb # 20: usage_01749.pdb # 21: usage_01752.pdb # 22: usage_01962.pdb # 23: usage_01983.pdb # 24: usage_02118.pdb # 25: usage_02923.pdb # 26: usage_03399.pdb # 27: usage_03594.pdb # 28: usage_03596.pdb # 29: usage_03601.pdb # 30: usage_03627.pdb # 31: usage_03631.pdb # 32: usage_03632.pdb # 33: usage_04240.pdb # 34: usage_04241.pdb # 35: usage_04384.pdb # 36: usage_04385.pdb # 37: usage_04387.pdb # 38: usage_04391.pdb # 39: usage_04392.pdb # 40: usage_04393.pdb # 41: usage_04401.pdb # 42: usage_04402.pdb # 43: usage_04665.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 65 ( 23.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 65 ( 66.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00499.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_00813.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFF-------- 51 usage_00848.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLA----------- 48 usage_00852.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLA----------- 48 usage_01385.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01395.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01423.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_01424.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFF-------- 51 usage_01435.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01458.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_01488.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_01497.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_01501.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_01503.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_01648.pdb 1 RLRPILMASLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_01655.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01656.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_01657.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01658.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_01749.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAV-------------------------- 32 usage_01752.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_01962.pdb 1 RFRPIIMTSFAFILGVVPLYIAAG-ASSASQRAIGTTVFWGMLVGTLLSVFLVPLFYVVV 59 usage_01983.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_02118.pdb 1 ---LVILLGVVGLSALTGY-LDYVLL------PALAIFIGLTIYAIQRKRQ--------- 41 usage_02923.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_03399.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_03594.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 59 usage_03596.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_03601.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_03627.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_03631.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_03632.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_04240.pdb 1 ----ILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAI---------- 45 usage_04241.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTA--------------- 44 usage_04384.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFF-------- 51 usage_04385.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_04387.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_04391.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 usage_04392.pdb 1 --RPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 57 usage_04393.pdb 1 ---PILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 56 usage_04401.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTA--------------- 43 usage_04402.pdb 1 RLRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIF--------- 50 usage_04665.pdb 1 -LRPILMTSLAFILGVMPLVISTG-AGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVV 58 i m s afilgv pl i g a a usage_00499.pdb ----- usage_00813.pdb ----- usage_00848.pdb ----- usage_00852.pdb ----- usage_01385.pdb 60 RRRF- 63 usage_01395.pdb 60 RRRF- 63 usage_01423.pdb 59 RRRF- 62 usage_01424.pdb ----- usage_01435.pdb 60 RRRF- 63 usage_01458.pdb 59 RRRF- 62 usage_01488.pdb 59 RRRF- 62 usage_01497.pdb ----- usage_01501.pdb ----- usage_01503.pdb ----- usage_01648.pdb ----- usage_01655.pdb 60 RRRF- 63 usage_01656.pdb 58 RRRF- 61 usage_01657.pdb 60 RRRF- 63 usage_01658.pdb 58 RRRF- 61 usage_01749.pdb ----- usage_01752.pdb 60 RRRF- 63 usage_01962.pdb 60 RKFF- 63 usage_01983.pdb 58 RRRF- 61 usage_02118.pdb ----- usage_02923.pdb 58 RRRF- 61 usage_03399.pdb 59 RRRF- 62 usage_03594.pdb 60 RRRFS 64 usage_03596.pdb 58 RRRF- 61 usage_03601.pdb 59 RRRFS 63 usage_03627.pdb 58 RRRF- 61 usage_03631.pdb 58 RRRF- 61 usage_03632.pdb 58 RRRF- 61 usage_04240.pdb ----- usage_04241.pdb ----- usage_04384.pdb ----- usage_04385.pdb 58 RRRFS 62 usage_04387.pdb 59 RRRF- 62 usage_04391.pdb 59 RRRF- 62 usage_04392.pdb 58 RRRF- 61 usage_04393.pdb 57 RRR-- 59 usage_04401.pdb ----- usage_04402.pdb ----- usage_04665.pdb 59 RRR-- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################