################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:35 2021 # Report_file: c_1297_68.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00231.pdb # 2: usage_00232.pdb # 3: usage_00233.pdb # 4: usage_00234.pdb # 5: usage_02344.pdb # 6: usage_02355.pdb # # Length: 54 # Identity: 46/ 54 ( 85.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 54 ( 85.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 54 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 KWSTLLRLARKSGELVPV--GRGGERRALGLANPGLGGNAYISPTMWAGIQYLG 52 usage_00232.pdb 1 -WSTLLRLARKSGELVPVGR----ERRALGLANPGLGGNAYISPTMWAGIQYLG 49 usage_00233.pdb 1 -WSTLLRLARKSGELVPV---G-GERRALGLANPGLGGNAYISPTMWAGIQYLG 49 usage_00234.pdb 1 -WSTLLRLARKSGELVPV--GRGGERRALGLANPGLGGNAYISPTMWAGIQYLG 51 usage_02344.pdb 1 KWSTLLRLARKSGELVPV--GRGGERRALGLANPGLGGNAYISPTMWAAIQYLG 52 usage_02355.pdb 1 -WSTLLRLARKSGELVPV--GRGGERRALGLANPGLGGNAYISPTMWAAIQYLG 51 WSTLLRLARKSGELVPV ERRALGLANPGLGGNAYISPTMWA IQYLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################