################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:02:26 2021 # Report_file: c_0396_14.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00034.pdb # 2: usage_00072.pdb # 3: usage_00087.pdb # 4: usage_00238.pdb # 5: usage_00243.pdb # 6: usage_00331.pdb # 7: usage_00357.pdb # 8: usage_00361.pdb # 9: usage_00445.pdb # 10: usage_00446.pdb # 11: usage_00461.pdb # 12: usage_00518.pdb # 13: usage_00596.pdb # 14: usage_00633.pdb # 15: usage_00644.pdb # 16: usage_00662.pdb # 17: usage_00663.pdb # 18: usage_00674.pdb # # Length: 110 # Identity: 19/110 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/110 ( 72.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/110 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00072.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00087.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVTDG 49 usage_00238.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 46 usage_00243.pdb 1 ----------QATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVTDG 44 usage_00331.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 46 usage_00357.pdb 1 NSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 54 usage_00361.pdb 1 ----------QATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 44 usage_00445.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00446.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00461.pdb 1 ----------QATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVTDG 44 usage_00518.pdb 1 ----------ASRLLLD--------DKYMCESSGFYPEAINITWEKQTQKFPHPIEISED 42 usage_00596.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVTDG 46 usage_00633.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 46 usage_00644.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 46 usage_00662.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00663.pdb 1 -----TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 49 usage_00674.pdb 1 --------APQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRN------SKSVADG 46 qatvfpk ntliCfvdnifPpvINITWlrn sksv dg usage_00034.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00072.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00087.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00238.pdb 47 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 95 usage_00243.pdb 45 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 93 usage_00331.pdb 47 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 95 usage_00357.pdb 55 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHW-- 101 usage_00361.pdb 45 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHW-- 91 usage_00445.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00446.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00461.pdb 45 VYETSFLVNRDHSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWSS 93 usage_00518.pdb 43 VITGPTIKNMDGTFNVTSCLKLNQEDPGTVYQCVVRHASLHTPLRSNFT- 91 usage_00596.pdb 47 VYETSFLVNRDHSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 95 usage_00633.pdb 47 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 95 usage_00644.pdb 47 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHW-- 93 usage_00662.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00663.pdb 50 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHWEP 98 usage_00674.pdb 47 VYETSFFVNRDYSFHKLSYLTFI-PSDDDIYDCKVEHWGLEEPVLKHW-- 93 Vyetsf vNrD sFhklSyLtfi psdddiYdCkVeHwgLeePvlkhw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################