################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:16 2021 # Report_file: c_0381_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00074.pdb # 7: usage_00091.pdb # # Length: 97 # Identity: 4/ 97 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 97 ( 13.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 97 ( 36.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -TVHLTWQPS-AGA-------THYLVRCSPASPKGEEEEREVQVG--RPEVLLD--GLEP 47 usage_00018.pdb 1 -HVVLRWLPP-P--ETPMTSHIRYEVDVSAGNG----SVQRVEILEGRTECVLS--NLRG 50 usage_00019.pdb 1 --VVLRWLPP-P--ETPMTSHIRYEVDVSAGNG--AGSVQRVEILEGRTECVLS--NLRG 51 usage_00021.pdb 1 -HVVLRWLPP-P--ETPMTSHIRYEVDVSAGQG--AGSVQRVEILEGRTECVLS--NLRG 52 usage_00022.pdb 1 -HVVLRWLPP-P--ETPMTSHIRYEVDVSAG-G--AGSVQRVEILEGRTECVLS--NLRG 51 usage_00074.pdb 1 TRMSIQWEKP-V--SAFPIHCFDYEVKIHNTR---NGYLQIEKLM--TNAF-IS--IIDD 49 usage_00091.pdb 1 -DFLVTFNAPHL--KKKYLKKVKHDVAYRPARG--ESNWTHVSLF--HTRTTIPQRKLRP 53 w p y V v l usage_00017.pdb 48 GRDYEVSVQSLRGP-------EGSEARGIRARTPTSG 77 usage_00018.pdb 51 RTRYTFAVRARMA-EP-SFGGFWSAWSEPVSLL---- 81 usage_00019.pdb 52 RTRYTFAVRARMA-EP-SFGGFWSAWSEPVSLL---- 82 usage_00021.pdb 53 RTRYTFAVRARMA-EP-SFGGFWSEWSEPVSLL---- 83 usage_00022.pdb 52 RTRYTFAVRARMA-EP-SFGGFWSAWSEPVSLL---- 82 usage_00074.pdb 50 LSKYDVQVRAAVS-SMCREAGLWSEWSQPIYVG---- 81 usage_00091.pdb 54 KAMYEIKVRSIPH-ND-YFKGFWSEWSPSSTFE---- 84 Y Vr wS ws #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################