################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:53 2021 # Report_file: c_1004_36.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00142.pdb # 2: usage_00143.pdb # 3: usage_00152.pdb # 4: usage_00172.pdb # 5: usage_00216.pdb # 6: usage_00227.pdb # 7: usage_00254.pdb # 8: usage_00256.pdb # 9: usage_00257.pdb # 10: usage_00297.pdb # 11: usage_00369.pdb # # Length: 74 # Identity: 8/ 74 ( 10.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 74 ( 18.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 74 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00142.pdb 1 --KQVTAIIKPFKLDEVRESLAEVGVTG-LTVTEVKGF---------------------- 35 usage_00143.pdb 1 -MKQVTAIIKPFKLDEVRESLAEVGVTG-LTVTEVKG----------------------- 35 usage_00152.pdb 1 ---KVEAIIRPFKLDEVKIALVNAGIVG-MTVSEVRGF---------------------- 34 usage_00172.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVG-MTVSEVRGFGR-QK---------GQT--GSE 45 usage_00216.pdb 1 KFYKVEAIVRPWRIQQVSSALLKIGIRG-VTVSDVRGF--D------------------- 38 usage_00227.pdb 1 --KKIEAIIRPFKLDEVKIALVNAGIVG-MTVSEVRGFGR-Q-------------KRGSE 43 usage_00254.pdb 1 SMKKIEAIIRSDKLEDLKAALVQSGFIKGMTISQVLGF---G------------------ 39 usage_00256.pdb 1 HMKLITAIVKPFTLDDVKTSLEDAGVLG-MTVSEIQGYGR-------------------- 39 usage_00257.pdb 1 HMKLITAIVKPFTLDDVKTSLEDAGVLG-MTVSEIQGYGR-QGHTEVYRGAE-------- 50 usage_00297.pdb 1 -MKKIEAIIRPFKLDEVKIALVNAGIVG-MTVSEVRGFGR-Q-----------------E 40 usage_00369.pdb 1 -MKMVVAVIRPEKLECVKKALEERGFVG-MTVTEVKGRGE-------------------- 38 Ai p l v L G g Tv G usage_00142.pdb 36 ------PKVKIEVV 43 usage_00143.pdb 36 ------PKVKIEVV 43 usage_00152.pdb 35 ----FLQKLKIEIV 44 usage_00172.pdb 46 YTVEFLQKLKLEIV 59 usage_00216.pdb 39 ---KFVAKVKMEIV 49 usage_00227.pdb 44 YTVEFLQKLKLEIV 57 usage_00254.pdb 40 ---TLLAKVKVEIV 50 usage_00256.pdb 40 ---DFVPKVRIEVV 50 usage_00257.pdb 51 YSVDFVPKVRIEVV 64 usage_00297.pdb 41 YTVEFLQKLKLEIV 54 usage_00369.pdb 39 ---DLLQKTKVEVV 49 K E V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################