################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:26 2021 # Report_file: c_0008_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00043.pdb # 2: usage_00045.pdb # 3: usage_00046.pdb # 4: usage_00051.pdb # 5: usage_00061.pdb # 6: usage_00062.pdb # 7: usage_00063.pdb # 8: usage_00064.pdb # 9: usage_00106.pdb # 10: usage_00110.pdb # 11: usage_00111.pdb # 12: usage_00112.pdb # # Length: 292 # Identity: 64/292 ( 21.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 256/292 ( 87.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/292 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00045.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00046.pdb 1 -VMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 59 usage_00051.pdb 1 EIISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNAL 60 usage_00061.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00062.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00063.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00064.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00106.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00110.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00111.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERAQVLEIV 60 usage_00112.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERAQVLEIV 60 vmaallTPFDqQqaldkasLrrlvqfniqqGIDglyVgGsTGeafvqSlsEr QvLeiv usage_00043.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00045.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00046.pdb 60 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 118 usage_00051.pdb 61 YDVTH---KLIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEI 117 usage_00061.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00062.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00063.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00064.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00106.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00110.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAI 119 usage_00111.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRHGFDAVSAVTPFYYP-FSLEEHCDHYRAI 119 usage_00112.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRHGFDAVSAVTPFYYP-FSLEEHCDHYRAI 119 aeeak KLIahVGcvstaesqqLaasakr gfdaVSavtPfYyP fs eehcdhYraI usage_00043.pdb 120 IDSADGLPMVVYNIPARSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00045.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00046.pdb 119 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 178 usage_00051.pdb 118 ARISS-HSLYIYNYPAATGYDIPPSILK----SLPVKGIKDTNQDLAHSLEYKLNLPGVK 172 usage_00061.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00062.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00063.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00064.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00106.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00110.pdb 120 IDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00111.pdb 120 IDSADGLPMVVYNIPALSGVKLTLGQIYTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 usage_00112.pdb 120 IDSADGLPMVVYNIPALSGVKLTLGQIYTLVTLPGVGALKQTSGDLYQMEQIRREHPDLV 179 idsad lpmvvYNiPA sGvkltl qi lpgVgalKqTsgDLyqmeqirrehPdlv usage_00043.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00045.pdb 180 LYNGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00046.pdb 179 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 238 usage_00051.pdb 173 VYNGSNTLIYYSLL-SLDGVVASFTNFIPEVIVKQRDLIKQGKLDDALRLQELINRLADI 231 usage_00061.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00062.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00063.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00064.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00106.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00110.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00111.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 usage_00112.pdb 180 LYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDL 239 lYNGyd ifasgLL gaDGgigStyNimgwryqgivkalKeGdiqtAqkLQtecNkviDl usage_00043.pdb 240 LIKTGVFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQE- 289 usage_00045.pdb 240 LIKTGVFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQE- 289 usage_00046.pdb 239 LIKTGVFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYL-------------- 275 usage_00051.pdb 232 LRKYGSISAIYVLVNEFQGY-DVGYPRPPIFPLTDEEALSLKRE-------- 274 usage_00061.pdb 240 LIKTGVFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 290 usage_00062.pdb 240 LIKTGIFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 290 usage_00063.pdb 240 LIKTGLFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 290 usage_00064.pdb 240 LIKTGRFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 290 usage_00106.pdb 240 LIKTGVFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQE- 289 usage_00110.pdb 240 LIKTGWFRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 290 usage_00111.pdb 240 LIKTGIFRGLKTVLHYM-DVISVPLCRKPFGPVDEKCLPELKALAQQLM--- 287 usage_00112.pdb 240 LIKTGIFRGLKTVLHYM-DVISVPLCRKPFGPVDEKCL-------------- 276 LiKtG frglktvlhym dv sVplcRkPfgPvdek l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################