################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:18 2021 # Report_file: c_0113_13.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00130.pdb # 7: usage_00131.pdb # 8: usage_00132.pdb # 9: usage_00219.pdb # 10: usage_00220.pdb # 11: usage_00221.pdb # 12: usage_00222.pdb # 13: usage_00223.pdb # # Length: 108 # Identity: 47/108 ( 43.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/108 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/108 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIM-GT--------VISIGKRCLLG 51 usage_00014.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-GGGTHVISIGKRCLLG 58 usage_00015.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-GGGTHVISIGKRCLLG 58 usage_00016.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-GGGTHVISIGKRCLLG 58 usage_00017.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIM-----------VISIGKRCLLG 49 usage_00130.pdb 1 GFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIMGT-LS-GGGQHVISLGKRCLLG 58 usage_00131.pdb 1 GFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIM-G---------VISLGKRCLLG 50 usage_00132.pdb 1 ----------------GRISAGVTVDDGTDVGGGASIM-G---------VISLGKRCLLG 34 usage_00219.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIM-GTLST----HVISIGKRCLLG 55 usage_00220.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-GGGTHVISIGKRCLLG 58 usage_00221.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-G---HVISIGKRCLLG 55 usage_00222.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LS-GGGTHVISIGKRCLLG 58 usage_00223.pdb 1 GFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIM-GTL------HVISIGKRCLLG 53 GRISAGV V DG DVGGGASIM VIS GKRCLLG usage_00013.pdb 52 ANSGLGISLGDDCVVEAGLYVTA------------------------- 74 usage_00014.pdb 59 ANSGLGISLGDDCVVEAGLYVTA------------------------- 81 usage_00015.pdb 59 ANSGLGISLGDDCVVEAGLYVTA------------------------- 81 usage_00016.pdb 59 ANSGLGISLGDDCVVEAGLYVTA------------------------- 81 usage_00017.pdb 50 ANSGLGISLGDDCVVEAGLYVTA------------------------- 72 usage_00130.pdb 59 ANSGCGIPLGDDCIIEAGLYITA------------------------- 81 usage_00131.pdb 51 ANSGCGIPLGDDCIIEAGLYITA------------------------- 73 usage_00132.pdb 35 ANSGCGIPLGDDCIIEAGLYITAGTKVLFDGSLHKASTLAGSNGLIFR 82 usage_00219.pdb 56 ANSGLGISLGDDCVVEAGLYVTA------------------------- 78 usage_00220.pdb 59 ANSGLGISLGDDCVVEAGLYVTA------------------------- 81 usage_00221.pdb 56 ANSGLGISLGDDCVVEAGLYVTA------------------------- 78 usage_00222.pdb 59 ANSGLGISLGDDCVVEAGLYVTA------------------------- 81 usage_00223.pdb 54 ANSGLGISLGDDCVVEAGLYVTA------------------------- 76 ANSG GI LGDDC EAGLY TA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################