################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:25:46 2021 # Report_file: c_0705_11.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00021.pdb # 2: usage_00074.pdb # 3: usage_00076.pdb # 4: usage_00090.pdb # 5: usage_00096.pdb # 6: usage_00102.pdb # 7: usage_00103.pdb # 8: usage_00209.pdb # 9: usage_00238.pdb # 10: usage_00241.pdb # 11: usage_00340.pdb # 12: usage_00357.pdb # 13: usage_00359.pdb # 14: usage_00683.pdb # 15: usage_00779.pdb # # Length: 92 # Identity: 23/ 92 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 92 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 92 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 GTINLHFMFTGPTDAKARYMVAYAP-P--G-MEPPKTPEAAAHCIHAEWDTGLNSKFTFS 56 usage_00074.pdb 1 GTINLHFMFTGSTDSKARYMVAYVPPG--V-ETPPDTPEKAAHCIHAEWDTGLNSKFTFS 57 usage_00076.pdb 1 GTINLHFMFTGSTDSKARYMVAYVPPG--V-ETPPDTPEKAAHCIHAEWDTGLNSKFTFS 57 usage_00090.pdb 1 GTINLHFMFTGPTDAKARYMVAYVP-P--G-MDAPDNPEEAAHCIHAEWDTGLNSKFTFS 56 usage_00096.pdb 1 GTINLHFMFTGPTDAKARYMVAYAP-P--G-MEPPKTPEAAAHCIHAEWDTGLNSKFTFS 56 usage_00102.pdb 1 GTINLHFMFTGPTDAKARYMVAYVP-P--G-MDAPDNPEEAAHCIHAEWDTGLNSKFTFS 56 usage_00103.pdb 1 GTINLHFMFTGPTDAKARYMVAYAP-P--G-MEPPKTPEAAAHCIHAEWDTGLNSKFTFS 56 usage_00209.pdb 1 GSLNFLFVFTGAAMVKGKFLIAYTP-P--G-AGKPTTRDQAMQSTYAIWDLGLNSSFNFT 56 usage_00238.pdb 1 GTLNLHFMYTGPTNNKAKYMVAYIPPG--T-HPLPETPEMASHCYHAEWDTGLNSTFTFT 57 usage_00241.pdb 1 GSLNYHFMYTGPTHHKAKFMVAYIPPGI-ETDRLPKTPEDAAHCYHSEWDTGLNSQFTFA 59 usage_00340.pdb 1 GTINLHFMFTGSTDSKARYMVAYVPPG--V-ETPPDTPEKAAHCIHAEWDTGLNSKFTFS 57 usage_00357.pdb 1 GTINLHFMFTGSTDSKARYMVAYIPPG--V-ETPPDTPEEAAHCIHAEWDTGLNSKFTFS 57 usage_00359.pdb 1 GTINLHFMFTGSTDSKARYMVAYIPPG--V-ETPPDTPEEAAHCIHAEWDTGLNSKFTFS 57 usage_00683.pdb 1 GTINLHFMFTGSTDSKARYMVAYVP-P-GV-ETPPDTPEKAAHCIHAEWDTGLNSKFTFS 57 usage_00779.pdb 1 GSLVYTFVFTGTAMMKGKFLIAYTP-P--G-AGKPTSRDQAMQATYAIWDLGLNSSYSFT 56 G n F TG K AY P P A a WD GLNS f F usage_00021.pdb 57 IPYLSAADYTYTASDVAETTNVQGWVCLFQ-- 86 usage_00074.pdb 58 IPYVSAADYAYTASDVAETTNVQGWVCIYQ-- 87 usage_00076.pdb 58 IPYVSAADYAYTASDVAETTNVQGWVCIYQ-- 87 usage_00090.pdb 57 IPYISAADYTYTASHEAETTCVQGWVCVYQ-- 86 usage_00096.pdb 57 IPYLSAADYTYTASDVAETTNVQGWVCLFQ-- 86 usage_00102.pdb 57 IPYISAADYTYTASHEAETTCVQGWVCVYQ-- 86 usage_00103.pdb 57 IPYLSAADYTYTASDVAETTNVQGWVCLFQ-- 86 usage_00209.pdb 57 APFISPTHYRQTSYTSPTITSVDGWVTVWQ-- 86 usage_00238.pdb 58 VPYFSAADYAYTYADEPEQASVQGWVGVYQ-- 87 usage_00241.pdb 60 VPYVSASDFSYTHTDTPAMATTNGWVAVFQVT 91 usage_00340.pdb 58 IPYVSAADYAYTASDVAETTNVQGWVCIYQ-- 87 usage_00357.pdb 58 IPYVSAADYAYTASDTAETTNVQGWVCVYQ-- 87 usage_00359.pdb 58 IPYVSAADYAYTASDTAETTNVQGWVCVYQ-- 87 usage_00683.pdb 58 IPYVSAADYAYTASDVAETTNVQGWVCIYQ-- 87 usage_00779.pdb 57 VPFISPTHFRMVGTDQANITNVDGWVTVWQ-- 86 P S t v GWV Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################