################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:50 2021 # Report_file: c_0110_18.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00112.pdb # 2: usage_00184.pdb # 3: usage_00191.pdb # 4: usage_00192.pdb # # Length: 275 # Identity: 107/275 ( 38.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 223/275 ( 81.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/275 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 -ELQTVIQYNDGIVQTIARGG--------------NKDL--KRLKECVSIRDQLLYKKLL 43 usage_00184.pdb 1 PELNVIQNYNEGIIDNLSK--DSLVDLVPWLKIFPNKTL--EKLKSHVKIRNDLLNKILE 56 usage_00191.pdb 1 PELQTVIQYNDGIVQTIAR-------------------L--KRLKECVSIRDQLLYKKLL 39 usage_00192.pdb 1 ---QTVIQYNDGIVQTIAR--------------------DLKRLKECVSIRDQLLYKKLL 37 qtviqYNdGIvqtiar krLKecVsIRdqLLyKkLl usage_00112.pdb 44 EHKKSLTPGEPRDLLDALLIGQQRGS------GGADDITEDHVLMTAAEAFGAGVETTST 97 usage_00184.pdb 57 NYKEKFRSDSITNMLDTLMQAKMNSDNGQDSE----LLSDNHILTTIGDIFGAGVETTTS 112 usage_00191.pdb 40 EH----TPGEPRDLLDALLIGQQRGS------GGADDITEDHVLMTAAEAFGAGVETTST 89 usage_00192.pdb 38 EHKKSLTPGEPRDLLDALLIGQQRGS------GGADDITEDHVLMTAAEAFGAGVETTST 91 eh tpgeprdlLDaLligqqrgs ditedHvLmTaaeaFGAGVETTst usage_00112.pdb 98 TLLWTIAFLLHHPQLQERVQAELDECVGVDRPPCLSDRPHLPLLDAVLCEVMRIRPVSPI 157 usage_00184.pdb 113 VVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPM 172 usage_00191.pdb 90 TLLWTIAFLLHHPQLQERVQAELDECVGVDRPPCLSDRPHLPLLDAVLCEVMRIRPVSPI 149 usage_00192.pdb 92 TLLWTIAFLLHHPQLQERVQAELDECVGVDRPPCLSDRPHLPLLDAVLCEVMRIRPVSPI 151 tllWTiAFLLHhPQlqervqaElDecVGvdRpPclSDRphLpLLdAvlcEVmRiRPVsPi usage_00112.pdb 158 LIPHVAMQDTSLGGHSVPKGTRVLVNMWAIHHDPKHWDQPEQFNPERFLEP--------- 208 usage_00184.pdb 173 LIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLN-PAGTQLISP 231 usage_00191.pdb 150 LIPHVAMQDTSLGGHSVPKGTRVLVNMWAIHHDPKHWDQPEQFNPERFLE---------- 199 usage_00192.pdb 152 LIPHVAMQDTSLGGHSVPKGTRVLVNMWAIHHDPKHWDQPEQFNPERFL----------- 200 LIPHvAmqDtSlGghsVpKGTrVlvNmWAiHHdpKhWdQPeQFnPERFL usage_00112.pdb 209 Q-SSFLPFGAGPRVCVGESLARIELFLFVSRPLQR 242 usage_00184.pdb 232 S-VSYLPFGAGPRSCIGEILARQELFLIMAWLLQR 265 usage_00191.pdb 200 -PSSFLPFGAGPRVCVGESLARIELFLFVSRPLQR 233 usage_00192.pdb 201 Q-SSFLPFGAGPRVCVGESLARIELFLFVSRPLQR 234 sSfLPFGAGPRvCvGEsLARiELFLfvsrpLQR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################