################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:46 2021 # Report_file: c_0470_72.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00110.pdb # 2: usage_00111.pdb # 3: usage_00189.pdb # 4: usage_00190.pdb # 5: usage_00237.pdb # # Length: 81 # Identity: 15/ 81 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 81 ( 61.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 81 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00110.pdb 1 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDL-EDAQAFTAPKKI 59 usage_00111.pdb 1 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDL-EDAQAFTAPKKI 59 usage_00189.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDL-SNALPFTSPKKI 57 usage_00190.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDL-EDALPFTSPKKI 57 usage_00237.pdb 1 --NKITVVGGGELGIACTLAISAKGIADRLVLLDLS--ATMDLEIFNL---------PNV 47 qKv lVGdGavGssya Am qGIA e ivD Tkgda dl kki usage_00110.pdb 60 -YSGEYSDCKDADLVVIT--- 76 usage_00111.pdb 60 -YSGEYSDCKDADLVVIT--- 76 usage_00189.pdb 58 -YSAEYSDAKDADLVVIT--- 74 usage_00190.pdb 58 -YSAEYSDAKDADLVVIT--- 74 usage_00237.pdb 48 EISKDLSASAHSKVVIFTVNS 68 yS eySd kdadlVviT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################