################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:10 2021 # Report_file: c_0673_59.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00607.pdb # 2: usage_00608.pdb # 3: usage_00609.pdb # 4: usage_00610.pdb # 5: usage_00716.pdb # 6: usage_01216.pdb # 7: usage_01606.pdb # 8: usage_01607.pdb # 9: usage_01782.pdb # 10: usage_01783.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 61 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 61 ( 59.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00607.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIW------------- 37 usage_00608.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIWNT----------- 39 usage_00609.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIWNT----------- 39 usage_00610.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIWNT----------- 39 usage_00716.pdb 1 -----VGVEAG---SVKDKKYAKIKSVSSIEGDCEVNQRK-GKVIS-------------L 38 usage_01216.pdb 1 -QTLSAGQYLLSPN---QRFKLLLQGD------GNLVIQDNGATVWVA------------ 38 usage_01606.pdb 1 V-------VYGA-----GASKLVFQGD------GNLVAYGPNGAATWNAGTQGKGAVRAV 42 usage_01607.pdb 1 -QTLSAGQYLLSPN---QRFKLLLQGD------GNLVIQDNGATVWVA------------ 38 usage_01782.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIWNT----------- 39 usage_01783.pdb 1 -QVIRDGQFITSPN---GKYKLVMQAD------GNLVLYEDGTKPIWNT----------- 39 kl q d gnlv g usage_00607.pdb - usage_00608.pdb - usage_00609.pdb - usage_00610.pdb - usage_00716.pdb 39 F 39 usage_01216.pdb - usage_01606.pdb 43 F 43 usage_01607.pdb - usage_01782.pdb - usage_01783.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################