################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:32 2021 # Report_file: c_0888_97.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00125.pdb # 2: usage_00141.pdb # 3: usage_00293.pdb # 4: usage_00294.pdb # 5: usage_00460.pdb # 6: usage_00622.pdb # 7: usage_00624.pdb # 8: usage_00626.pdb # 9: usage_00628.pdb # 10: usage_00690.pdb # 11: usage_00838.pdb # 12: usage_00858.pdb # 13: usage_00861.pdb # 14: usage_00865.pdb # # Length: 81 # Identity: 0/ 81 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 81 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 -IPKFVSFLGK--TDCSPIQFESAWALTNIAS-GTSEQ--TKAVVDGGAIPAFISLLA-S 53 usage_00141.pdb 1 GILKLLQLLKV--Q-NEDVQRAVCGALRNLVF-EDNDN--KLEVAELNGVPRLLQVLKQT 54 usage_00293.pdb 1 -LPQMVQQLNS--P-DQQELQSALRKLSQIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 52 usage_00294.pdb 1 -LPQMVQQLNS--P-DQQELQSALRKLSQIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 52 usage_00460.pdb 1 --PQMVQQLNS--P-DQQELQSALRKLSQIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 51 usage_00622.pdb 1 ALPALVQLLSS--P-NEQILQEALWALSNIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 53 usage_00624.pdb 1 ALPALVQLLSS--P-NEQILQEALWALSNIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 53 usage_00626.pdb 1 ALPALVQLLSS--P-NEQILQEALWALSNIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 53 usage_00628.pdb 1 ALPALVQLLSS--P-NEQILQEALWALSNIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 53 usage_00690.pdb 1 -LPQMVQQLNS--P-DQQELQSALRKLSQIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 52 usage_00838.pdb 1 LVPFLVGVLSK--A-DFKTQKEAAWAITNYTSGGTVEQ--IVYLVHCGIIEPLMNLLS-A 54 usage_00858.pdb 1 GVEVLVKLLTS--T-DSEVQKEAARALANIAS-GPTSA--IKAIVDAGGVEVLQKLLT-S 53 usage_00861.pdb 1 -MTPLLSQFN-ENT-KLSMLRNATWTLSNFCR-GKP--PPAFEQTQ-PALPVLERLVQ-S 52 usage_00865.pdb 1 -LPALVQLLSS--P-NEQILQEALWALSNIAS-GGNEQ--IQAVIDAGALPALVQLLS-S 52 l l g l ll usage_00125.pdb 54 PHAHISEQAVWALGNIAGD-- 72 usage_00141.pdb 55 RDLETKKQITGLLWNLS---- 71 usage_00293.pdb 53 PNEQILQEALWALSNIAS--- 70 usage_00294.pdb 53 PNEQILQEALWALSNIAS--- 70 usage_00460.pdb 52 PNEQILQEALWTLGNIAS--- 69 usage_00622.pdb 54 PNEQILQEALWALSNIAS--- 71 usage_00624.pdb 54 PNEQILQEALWALSNIAS--- 71 usage_00626.pdb 54 PNEQILQEALWALSNIASGG- 73 usage_00628.pdb 54 PNEQILQEALWALSNIAS--- 71 usage_00690.pdb 53 PNEQILQEALWTLGNIAS--- 70 usage_00838.pdb 55 KDTKIIQVILDAISNIFQAAE 75 usage_00858.pdb 54 TDSEVQKEAQRALENIKS--- 71 usage_00861.pdb 53 MDEEVLTDACWALSYLS---- 69 usage_00865.pdb 53 PNEQILQEALWALSNIAS--- 70 l n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################