################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:47 2021 # Report_file: c_0912_12.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00094.pdb # 4: usage_00100.pdb # 5: usage_00101.pdb # 6: usage_00131.pdb # 7: usage_00146.pdb # 8: usage_00153.pdb # 9: usage_00154.pdb # 10: usage_00157.pdb # 11: usage_00183.pdb # 12: usage_00232.pdb # 13: usage_00233.pdb # 14: usage_00248.pdb # # Length: 31 # Identity: 2/ 31 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 31 ( 16.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 31 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHVM- 28 usage_00080.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHVM- 28 usage_00094.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHV-- 27 usage_00100.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHVMD 29 usage_00101.pdb 1 -RWARALYDFEA-LEEDELGFRSGEVVEVL- 28 usage_00131.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHVMD 29 usage_00146.pdb 1 -LKVRALKDFWNLHDPTALNVRAGDVITVL- 29 usage_00153.pdb 1 MNLVIALHSYEP-SHDGDLGFEKGEQLRIL- 29 usage_00154.pdb 1 -NLVIALHSYEP-SHDGDLGFEKGEQLRIL- 28 usage_00157.pdb 1 -CQVIGMYDYTA-QNDDELAFSKGQIINVL- 28 usage_00183.pdb 1 -ATAVALYNFAG-EQPGDLAFKKGDVITIL- 28 usage_00232.pdb 1 STYVQALFDFDP-QEDGELGFRRGDFIHV-- 28 usage_00233.pdb 1 -TYVQALFDFDP-QEDGELGFRRGDFIHVMD 29 usage_00248.pdb 1 -VRVRALYDYDG-QEQDELSFKAGDELTKL- 28 al L f G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################