################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:44 2021 # Report_file: c_1371_62.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00310.pdb # 2: usage_00315.pdb # 3: usage_00840.pdb # 4: usage_00841.pdb # 5: usage_00842.pdb # # Length: 81 # Identity: 11/ 81 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 81 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 81 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00310.pdb 1 -EALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDET-------LDEN 52 usage_00315.pdb 1 DADLQAEIVGKYNADLQKAVQIEEKKASEIATEAVKEHVTAEYEERYAEHEEHDR---IR 57 usage_00840.pdb 1 NTALEKWVVEKSEAPLKKAYQIQEKTARQAQIQAIRDQLLADRAAEREGEEN---AVNEH 57 usage_00841.pdb 1 -TALEKWVVEKSEAPLKKAYQIQEKTARQAQIQAIRDQLLADRAAE----AV-----NEH 50 usage_00842.pdb 1 NTALEKWVVEKSEAPLKKAYQIQEKTARQAQIQAIRDQLLADRAAE-----------E-H 48 aL vv k eA L kAyqI eK ar aq ai A ae usage_00310.pdb 53 ELGEILHAIEKNVVRSRVLAG 73 usage_00315.pdb 58 DVAEILEQ-EHAEVRRLI--- 74 usage_00840.pdb 58 ELAVIFHELERRIVREQILTG 78 usage_00841.pdb 51 ELAVIFHELERRIVREQILTG 71 usage_00842.pdb 49 ELAVIFHELERRIVREQILTG 69 ela I h E VR i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################