################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:59 2021 # Report_file: c_0864_66.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00054.pdb # 4: usage_00407.pdb # # Length: 86 # Identity: 9/ 86 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 86 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 86 ( 43.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -CDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIV---GH 56 usage_00008.pdb 1 QCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIV---GH 57 usage_00054.pdb 1 -KQFVDWLDQASADEVKGVRYSVFGCGDKN-WATTYQKVPAFIDETLAAKGAENI----- 53 usage_00407.pdb 1 ----IPLFDSLEETGAQGRKVACFGCGDSS-Y-EYFCGAVDAIEEKLKNLGAEIVQDGLR 54 d f lee G va FGCGD y eyfc a I GA iv usage_00007.pdb 57 WPTA---------------------- 60 usage_00008.pdb 58 WPTAGYHFEASKGLADDDHFVGLAID 83 usage_00054.pdb -------------------------- usage_00407.pdb 55 ID-G---------------------- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################