################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:48 2021 # Report_file: c_0863_143.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00023.pdb # 2: usage_00116.pdb # 3: usage_00117.pdb # 4: usage_00382.pdb # 5: usage_01088.pdb # 6: usage_01357.pdb # # Length: 80 # Identity: 8/ 80 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 80 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 80 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 GQERLREVELYPFQKAIDA----GADMVMTAHV-QFPAFDDTTYKSKLDGSDILVPATLS 55 usage_00116.pdb 1 DDTRLNTVELPPFKAAIQG----GVDAV-NAH--LIPAWDQQ------------YPATLS 41 usage_00117.pdb 1 DDTRLNTVELPPFKAAIQG----GVDAV-NAH--LIPAWDQQ------------YPATLS 41 usage_00382.pdb 1 TLEELDKTELVPFKKALEAGGIACPTSVMVGHM-LLPHFNKD------------VVSSIA 47 usage_01088.pdb 1 GQERLREVELYPFQKAIDA----GADMVMTAHV-QFPAFDDTTYKSKLDGSDILVPATLS 55 usage_01357.pdb 1 PFEKLWEEDLLPFRKVLER----EKKVTVMTAHVRYSSID-S------------LPATLS 43 L eL PF a v h p d patls usage_00023.pdb 56 KKVMTGLLRQEMGFNGVIVT 75 usage_00116.pdb 42 PAILTGQLRHKLGFKGLIVT 61 usage_00117.pdb 42 PAILTGQLRHKLGFKGLIVT 61 usage_00382.pdb 48 PEIVRDLLRRRFGYKGVIIT 67 usage_01088.pdb 56 KKVMTGLLRQEMGFNGVIVT 75 usage_01357.pdb 44 EKIITDVLREKIGFDGLVIS 63 t LR Gf G i t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################