################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:47 2021 # Report_file: c_1370_72.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01203.pdb # 2: usage_01205.pdb # 3: usage_01219.pdb # 4: usage_01220.pdb # 5: usage_01221.pdb # 6: usage_01222.pdb # 7: usage_01336.pdb # 8: usage_01337.pdb # # Length: 86 # Identity: 68/ 86 ( 79.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/ 86 ( 79.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 86 ( 20.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01203.pdb 1 NPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS-RRG 59 usage_01205.pdb 1 NPMVQQFIQRWVRLDEREFPEA--APLKYTSALTHDAILVIAEAFRYLRRQRVDVS-RRG 57 usage_01219.pdb 1 NPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS---- 56 usage_01220.pdb 1 NPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS---- 56 usage_01221.pdb 1 -PMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS---- 55 usage_01222.pdb 1 NPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSR--- 57 usage_01336.pdb 1 -PMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS---- 55 usage_01337.pdb 1 -PMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVS---- 55 PMVQQFIQRWVRLDEREFPEA APLKYTSALTHDAILVIAEAFRYLRRQRVDVS usage_01203.pdb 60 SAGDCLANPAVPWSQGIDIERAL--- 82 usage_01205.pdb 58 SAGDCLANPAVPWSQGIDIERAL--- 80 usage_01219.pdb 57 --GDCLANPAVPWSQGIDIERALK-- 78 usage_01220.pdb 57 -AGDCLA---VPWSQGIDIERALK-- 76 usage_01221.pdb 56 -AGDCLANPAVPWSQGIDIERALKMV 80 usage_01222.pdb 58 SAGDCLANPAVPWSQGIDIERALK-- 81 usage_01336.pdb 56 --GDCLANPAV---QGIDIERALKMV 76 usage_01337.pdb 56 --GDCLANPAVPWSQGIDIERALKM- 78 GDCLA V QGIDIERAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################