################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:00 2021 # Report_file: c_1320_54.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00331.pdb # 2: usage_00370.pdb # 3: usage_00403.pdb # 4: usage_00404.pdb # 5: usage_00422.pdb # 6: usage_00479.pdb # 7: usage_00481.pdb # 8: usage_00537.pdb # 9: usage_00596.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 57 ( 22.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 57 ( 64.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00331.pdb 1 ---KPEDTAIYYCAYSNT-CPGAS------ADFRS-WGQGTQVTVSSH--------- 37 usage_00370.pdb 1 RND---HGKVITCEAFQKET-------------DIRITTNTTLDVL-FPPSDPTVEI 40 usage_00403.pdb 1 ---QTDDTARYYCARAYQRY--------DYYAMDY-WGQGTSVTVS----------- 34 usage_00404.pdb 1 ---QTDDTARYYCARAYQRY--------DYYAMDY-WGQGTSVTVS----------- 34 usage_00422.pdb 1 ---KPEDTAVYYCNAASLVR----------GPLDH-WGQGTQVTVS----------- 32 usage_00479.pdb 1 ---KPEDTAVYYCAADLK-MQVAAYMNQ--RSVDY-WGQGTQVT------------- 37 usage_00481.pdb 1 ---KPEDTAVYYCAADLK-MQVAAYMNQ--RSVDY-WGQGTQVTVS-S--------- 40 usage_00537.pdb 1 ---KPEDTAIYYCASGF--GLSLSR-----YTYAY-WGQGTQVTVS-SH-------- 37 usage_00596.pdb 1 ---KPEDTAMYYCKASG-----------------SSWGQGTQVTVS-S--------- 27 dta yyC wgqgT vt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################