################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:21 2021 # Report_file: c_0076_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00019.pdb # 4: usage_00021.pdb # 5: usage_00042.pdb # 6: usage_00044.pdb # 7: usage_00050.pdb # 8: usage_00088.pdb # 9: usage_00095.pdb # 10: usage_00097.pdb # 11: usage_00136.pdb # # Length: 225 # Identity: 42/225 ( 18.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/225 ( 24.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/225 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 TSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK 60 usage_00004.pdb 1 ---NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK 57 usage_00019.pdb 1 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 60 usage_00021.pdb 1 TSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK 60 usage_00042.pdb 1 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 60 usage_00044.pdb 1 ----------------------------GDVGMAELCPGLLHPSSRLRTLWIWECGITAK 32 usage_00050.pdb 1 -----------------------------DAGIAELCPGLLSPASRLKTLWLWECDITAS 31 usage_00088.pdb 1 -----KDLSRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWVRECGLTAA 55 usage_00095.pdb 1 ----------------------------GDVGMAELCPGLLHPSSRLRTLWIWECGITAK 32 usage_00097.pdb 1 ----------------------------GDVGMAELCPGLLHPSSRLRTLWIWECGITAK 32 usage_00136.pdb 1 -----------------------------DAGIAELCPGLLSPASRLKTLWLWECDITAS 31 D G LC Ll P L LW C TA usage_00002.pdb 61 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 120 usage_00004.pdb 58 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 117 usage_00019.pdb 61 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 120 usage_00021.pdb 61 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 120 usage_00042.pdb 61 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 120 usage_00044.pdb 33 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 92 usage_00050.pdb 32 GCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQ 91 usage_00088.pdb 56 CCKAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLLHPNCNIHSLWLGNCDITAACCA 115 usage_00095.pdb 33 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 92 usage_00097.pdb 33 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 92 usage_00136.pdb 32 GCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQ 91 C VL L eL N L d G r LC L Pg l LW C C usage_00002.pdb 121 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 180 usage_00004.pdb 118 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 177 usage_00019.pdb 121 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 180 usage_00021.pdb 121 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 180 usage_00042.pdb 121 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 180 usage_00044.pdb 93 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 152 usage_00050.pdb 92 HVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLA 151 usage_00088.pdb 116 TLANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVRNPNCKMQQLILYDIFWGPEVDDELK 175 usage_00095.pdb 93 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 152 usage_00097.pdb 93 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 152 usage_00136.pdb 92 HVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLA 151 l n L EL S N L D G L qPg l L L D L usage_00002.pdb 181 ATLLANHSLRELDL------------------------------- 194 usage_00004.pdb 178 ATLLANHSLRELDL------------------------------- 191 usage_00019.pdb 181 ALEKDKPSLRVIS-------------------------------- 193 usage_00021.pdb 181 ATLLANHSLRELDL------------------------------- 194 usage_00042.pdb 181 ALEKDKPSLRVIS-------------------------------- 193 usage_00044.pdb 153 ATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 197 usage_00050.pdb 152 SLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQ----- 191 usage_00088.pdb 176 ALEEARPDVKIIS-------------------------------- 188 usage_00095.pdb 153 ATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 197 usage_00097.pdb 153 ATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 197 usage_00136.pdb 152 SLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYD 196 slr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################