################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:09 2021 # Report_file: c_0763_31.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00095.pdb # 2: usage_00147.pdb # 3: usage_00148.pdb # 4: usage_00163.pdb # 5: usage_00164.pdb # 6: usage_00165.pdb # 7: usage_00166.pdb # 8: usage_00167.pdb # 9: usage_00168.pdb # 10: usage_00408.pdb # # Length: 105 # Identity: 11/105 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/105 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/105 ( 35.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADR-KAGEQFGSVF---------PH 50 usage_00147.pdb 1 -SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPET 59 usage_00148.pdb 1 ----KAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPET 56 usage_00163.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGAS--SSGKKYRDAVRWKQSAP-PAK 53 usage_00164.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGASD-R--KK-YRAVRWKQ-AP-PAK 50 usage_00165.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGAS---SGKKYRDAVRWKQSAP-PAK 52 usage_00166.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGAS--R------KAVRWKQSAP-PAK 47 usage_00167.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGAS---SGKKYRDAVRWKQSAPMPAK 53 usage_00168.pdb 1 ----RCGVLGATGAVGTRFILLLSQHPLLELVAVGASDRSSGKKYRDAVRWKQSAPMPAK 56 usage_00408.pdb 1 ----KAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-GSVGKPYGEVVRWQTVGQVPKE 55 vLGAtG vG lLs HP a usage_00095.pdb 51 LITQDLPNLVAVKDA-D-FSNVDAVFC-LPHGTTQEIIKGL---- 88 usage_00147.pdb 60 EQ--D-IVVQECKP-EGNFLECDVVFSGLDADVAGDIEKSFVEA- 99 usage_00148.pdb 57 EQ--D-IVVQECKP-EGNFLECDVVFSGLDADVAGDIEKSFVEA- 96 usage_00163.pdb 54 VA--D-LTVRCCDP-AE-FSDCDIIFSGLDPDAAGEIEAFLKA-N 92 usage_00164.pdb 51 VA--D---VRCCDP-AE-FSDCDIIFSGLDPDAAGEIEAFLKA-- 86 usage_00165.pdb 53 VA--D-LTVRCCDP-AE-FSDCDIIFSGLDPDAAGEIEAFLKA-- 90 usage_00166.pdb 48 V-----LTVRCCDP-AE-FSDCDIIFSGLDPDAAGEIEAFLKA-N 84 usage_00167.pdb 54 VA--D-LTVRCCDP-AE-FSDCDIIFSGLDPDAAGEIEMAFLKA- 92 usage_00168.pdb 57 VA--D-LTVRCCDP-AE-FSDCDIIFSGLDPDAAGEIEMAFLKAN 96 usage_00408.pdb 56 IA--D-MEIKPTDP-KL-MDDVDIIFSPLPQGAAGPVEEQFAKEG 95 p f D Fs L ag ie #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################