################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:00 2021 # Report_file: c_0732_18.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00016.pdb # 2: usage_00119.pdb # 3: usage_00120.pdb # 4: usage_00194.pdb # 5: usage_00214.pdb # 6: usage_00275.pdb # 7: usage_00456.pdb # 8: usage_00467.pdb # 9: usage_00617.pdb # 10: usage_00722.pdb # # Length: 93 # Identity: 17/ 93 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 93 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 93 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 RGIDSEDAYPYVGQEESCMYNPTGK--AAKCRGYREIPEGNEK-ALKRAVARVGPVSVAI 57 usage_00119.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00120.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00194.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00214.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00275.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00456.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00467.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 usage_00617.pdb 1 GGICPDGDYPYVSDA-PNLCNIDRCTEKYGIKNYLSVP--D--NKLKEALRFLGPISISV 55 usage_00722.pdb 1 KGIDSDASYPYKAMDQKCQYDSKYR--AATCSKYTELPYGRED-VLKEAVANKGPVSVGV 57 GIdsd YPY c y aa c Y e P LKeAva GPvSv v usage_00016.pdb 58 DASLTSFQFYSKGVYYDESCNSDNLNHAVLAVG 90 usage_00119.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 usage_00120.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 usage_00194.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVVG- 89 usage_00214.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 usage_00275.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 usage_00456.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 usage_00467.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVVG- 89 usage_00617.pdb 56 AV-SDDFAFYKEGIFDGE-CGDQLNHAVMLVG- 85 usage_00722.pdb 58 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVV-- 88 da sF Y Gvyy C nh v v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################