################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:52 2021 # Report_file: c_1172_66.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_03456.pdb # 2: usage_03457.pdb # 3: usage_03458.pdb # 4: usage_03459.pdb # 5: usage_03471.pdb # 6: usage_03477.pdb # 7: usage_03478.pdb # 8: usage_05126.pdb # 9: usage_05127.pdb # # Length: 47 # Identity: 26/ 47 ( 55.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 47 ( 55.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 47 ( 19.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03456.pdb 1 GGTKTKTQT---GKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 44 usage_03457.pdb 1 GGTKTKTQTI-DGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 46 usage_03458.pdb 1 GGTKTKTQTI-DGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 46 usage_03459.pdb 1 GGTKTKTQTI-DGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 46 usage_03471.pdb 1 GGTK--TKTQTIDKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 45 usage_03477.pdb 1 GGTKTKTQTI-DGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 46 usage_03478.pdb 1 GGTKTKTQTI-DGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDG 46 usage_05126.pdb 1 GGSE--TTT-----TVSTTISSKVVDSTAADNTYKQSYTEITNALK- 39 usage_05127.pdb 1 GGSE--TTT------VSTTISSKVVDSTAADNTYKQSYTEITNALK- 38 GG T T V TTISSKVVDS A NT SYTEITN L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################