################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:24:33 2021 # Report_file: c_1105_51.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00100.pdb # 2: usage_00166.pdb # 3: usage_00173.pdb # 4: usage_00179.pdb # 5: usage_00183.pdb # 6: usage_00235.pdb # 7: usage_00275.pdb # 8: usage_00284.pdb # 9: usage_00287.pdb # 10: usage_00294.pdb # 11: usage_00296.pdb # 12: usage_00301.pdb # 13: usage_00307.pdb # 14: usage_00319.pdb # 15: usage_00321.pdb # 16: usage_00323.pdb # 17: usage_00340.pdb # 18: usage_00341.pdb # 19: usage_00345.pdb # 20: usage_00354.pdb # 21: usage_00405.pdb # 22: usage_00605.pdb # 23: usage_00740.pdb # 24: usage_00764.pdb # 25: usage_00769.pdb # 26: usage_00772.pdb # 27: usage_00780.pdb # 28: usage_00783.pdb # 29: usage_00785.pdb # 30: usage_00865.pdb # 31: usage_00867.pdb # 32: usage_00869.pdb # 33: usage_00902.pdb # 34: usage_00906.pdb # 35: usage_00920.pdb # 36: usage_00926.pdb # 37: usage_00928.pdb # 38: usage_00930.pdb # 39: usage_00953.pdb # # Length: 105 # Identity: 93/105 ( 88.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/105 ( 89.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/105 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00166.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00173.pdb 1 LSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 60 usage_00179.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00183.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00235.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00275.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00284.pdb 1 --GNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 58 usage_00287.pdb 1 ---NQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 57 usage_00294.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00296.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00301.pdb 1 LSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 60 usage_00307.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00319.pdb 1 -SGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 59 usage_00321.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00323.pdb 1 LSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 60 usage_00340.pdb 1 -SGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 59 usage_00341.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00345.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00354.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00405.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00605.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00740.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00764.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00769.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00772.pdb 1 ------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 54 usage_00780.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00783.pdb 1 --GNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 58 usage_00785.pdb 1 -------SLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 53 usage_00865.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00867.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00869.pdb 1 -----APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 55 usage_00902.pdb 1 ---NQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 57 usage_00906.pdb 1 -------SLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 53 usage_00920.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00926.pdb 1 --------LYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 52 usage_00928.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00930.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 usage_00953.pdb 1 ----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF 56 LYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYF usage_00100.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 99 usage_00166.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00173.pdb 61 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRM-- 103 usage_00179.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00183.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRM-- 98 usage_00235.pdb 55 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 98 usage_00275.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00284.pdb 59 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL 103 usage_00287.pdb 58 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVR--- 99 usage_00294.pdb 55 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 98 usage_00296.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00301.pdb 61 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 104 usage_00307.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVR--- 97 usage_00319.pdb 60 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 103 usage_00321.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00323.pdb 61 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 104 usage_00340.pdb 60 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 103 usage_00341.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00345.pdb 55 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVR--- 96 usage_00354.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRM-- 99 usage_00405.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00605.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL 100 usage_00740.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 99 usage_00764.pdb 55 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 98 usage_00769.pdb 55 QVGLLTTIGLSAANAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 98 usage_00772.pdb 55 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMAL 99 usage_00780.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 99 usage_00783.pdb 59 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 102 usage_00785.pdb 54 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 97 usage_00865.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 99 usage_00867.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRM-- 98 usage_00869.pdb 56 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 99 usage_00902.pdb 58 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 101 usage_00906.pdb 54 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 97 usage_00920.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00926.pdb 53 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRM-- 95 usage_00928.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00930.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 usage_00953.pdb 57 QVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR- 100 QVGLLTTIGLSAkNAILIVEFAKDLMDKEGKGLIEATLDAVR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################