################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:22 2021 # Report_file: c_1484_161.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_02198.pdb # 2: usage_02199.pdb # 3: usage_02200.pdb # 4: usage_03226.pdb # 5: usage_03227.pdb # 6: usage_03228.pdb # 7: usage_04556.pdb # 8: usage_04557.pdb # 9: usage_04558.pdb # # Length: 82 # Identity: 1/ 82 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 82 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 82 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02198.pdb 1 --------INKLKSSIESTNEAVVKLQETAEKTVYVLTAL-QD--------ISSQISSMN 43 usage_02199.pdb 1 -------NINKLKSSIESTNEAVVKLQETAEKTVYVLTALD----------ISSQISSMN 43 usage_02200.pdb 1 -------NINKLKSSIESTNEAVVKLQETAEKTVYVLTAL------------SSQISSMN 41 usage_03226.pdb 1 -KN----ADNINKLKSSIESTNEAVVKLQETAEKTVYVLT-A-L----QDYGIDISIELN 49 usage_03227.pdb 1 -KNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQD-Y-SGGSG---GIDISIELN 54 usage_03228.pdb 1 MKN----ADNINKLKSSIESTNEAVVKLQETAEKTVYVLT-A-L---------DISIELN 45 usage_04556.pdb 1 -------NINKLKSSIESTNEAVVKLQETAEKTVYVLTAL-QD--------ISSQISSMN 44 usage_04557.pdb 1 -------NINKLKSSIESTNEAVVKLQETAEKTVYVLTAL-VD--------ISSQISSMN 44 usage_04558.pdb 1 -------NINKLKSSIESTNEAVVKLQETAEKTVYVLTAL-Q-D--------SSQISSMN 43 n k v N usage_02198.pdb 44 QSLQQSKDYIKEAQRLLDTV-- 63 usage_02199.pdb 44 QSLQQSKDYIKEAQRLLDTV-- 63 usage_02200.pdb 42 QSLQQSKDYIKEAQRLLDTV-- 61 usage_03226.pdb 50 KAKSDLEESKEWIRRSNQKLDS 71 usage_03227.pdb 55 KAKSDLEESKEWIRRSNQKLD- 75 usage_03228.pdb 46 KAKSDLEESKEWIRRSNQKLD- 66 usage_04556.pdb 45 QSLQQSKDYIKEAQKILDTV-- 64 usage_04557.pdb 45 QSLQQSKDYIKEAQKILDTV-- 64 usage_04558.pdb 44 QSLQQSKDYIKEAQKILDTV-- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################