################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:38 2021 # Report_file: c_0896_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00269.pdb # 2: usage_00270.pdb # 3: usage_00295.pdb # 4: usage_00296.pdb # 5: usage_00297.pdb # 6: usage_00368.pdb # 7: usage_00374.pdb # # Length: 128 # Identity: 28/128 ( 21.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/128 ( 38.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/128 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00269.pdb 1 -RAKIDEVNDWVYDTVNNGVYKSGFASTQKAYEAAVIPLFESLDRLEK-LEGQDYLIGGQ 58 usage_00270.pdb 1 -QAQIDETNGWVYDGINNGVYKCGFARKQGPYEEAAIQLYEALDKCEEILGRQRYICGNT 59 usage_00295.pdb 1 -QTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQ 59 usage_00296.pdb 1 ------------------GVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQ 42 usage_00297.pdb 1 ------------------GVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQ 42 usage_00368.pdb 1 LRAEIDEVSKGIYTEVNNGVYRCGFAGSQDAYDAAYDRLFTKLDELSERLAQQRYLVGDT 60 usage_00374.pdb 1 -----------------NGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQ 43 GVYk GFA Q aY A fe L le L rYl G usage_00269.pdb 59 LTEADIRLFVTIVRFDPVYVTHFKCNLRTIRDGYPNLHR-WRKLYWGNPAFKDTCNFEHI 117 usage_00270.pdb 60 LSEADIKLFVTLIRFDEVYAVHFKCNKKLLRDY-PNMFNYTKDIFQIP-GMSSTV----- 112 usage_00295.pdb 60 LTEADIRLWTTLVRFDPVYVTHFKCDKHRISDY-LNLYGFLRDIYQMP-GIAETV----- 112 usage_00296.pdb 43 LTEADIRLWTTLVRFDPVYVTHFKCDKHRISDY-LNLYGFLRDIYQMP-GIAET------ 94 usage_00297.pdb 43 LTEADIRLWTTLVRFDPVYVTHFKCDKHRISDY-LNLYGFLRDIYQMP-GIAETV----- 95 usage_00368.pdb 61 ITEADVRLFTTLARFDAVYHGHFKCNRSKLSEM-PVLWAYARDLFQTP-GFGDTT----- 113 usage_00374.pdb 44 LTEADIRLWTTLVRFDPVYVTHFKCDKHRISDY-LNLYGFLRDIYQMP-GIAET------ 95 ltEADirL Tl RFD VY HFKC d nl rd q p g T usage_00269.pdb 118 KTHYFWSH 125 usage_00270.pdb -------- usage_00295.pdb -------- usage_00296.pdb -------- usage_00297.pdb -------- usage_00368.pdb -------- usage_00374.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################