################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:19 2021 # Report_file: c_0951_24.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00322.pdb # 2: usage_00323.pdb # 3: usage_00334.pdb # 4: usage_00345.pdb # 5: usage_00385.pdb # 6: usage_00386.pdb # 7: usage_00387.pdb # 8: usage_00388.pdb # 9: usage_00412.pdb # # Length: 42 # Identity: 4/ 42 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 42 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 42 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 HFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVA- 41 usage_00323.pdb 1 HFNDSGACVPRCPQPLVYNKLTFQLEPN-HTKYQYGGVCVA- 40 usage_00334.pdb 1 KFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVK- 41 usage_00345.pdb 1 HYIDGPHCVKTCPAG-VMGE---NNT--LVWKYADAGHVCHL 36 usage_00385.pdb 1 -FFDEGVCKEECPPMRKYNPTTYVLETNPEGKYAYGATCVK- 40 usage_00386.pdb 1 NFFDEGVCKEECPPMRKYNPTTYVLETNPEGKYAYGATCVK- 41 usage_00387.pdb 1 -FFDEGVCKEECPPMRKYNPTTYVLETNPEGKYAYGATCVK- 40 usage_00388.pdb 1 NFFDEGVCKEECPPMRKYNPTTYVLETNPEGKYAYGATCVK- 41 usage_00412.pdb 1 HFNHSGICELHCPALVTYNTDTFESMPNPEGRYTFGASCVT- 41 f d C CP yn kY g cv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################