################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:03 2021 # Report_file: c_0740_19.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00033.pdb # 4: usage_00096.pdb # 5: usage_00156.pdb # 6: usage_00358.pdb # 7: usage_00625.pdb # 8: usage_00632.pdb # 9: usage_00743.pdb # 10: usage_00783.pdb # # Length: 81 # Identity: 39/ 81 ( 48.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 81 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 81 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGII 59 usage_00002.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGII 59 usage_00033.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGII 59 usage_00096.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANL-QVIQ-MELDHERMSYLLYQMLCGIKHLHSAGII 58 usage_00156.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANL-QVIQ-MELDHERMSYLLYQML-GIKHLHSAGII 57 usage_00358.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGII 59 usage_00625.pdb 1 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 60 usage_00632.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGII 59 usage_00743.pdb 1 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 60 usage_00783.pdb 1 NVFTPQKTLEEFQDVYLVMELMDANL-QVIQ-MELDHERMSYLLYQML-GIKHLHSAGII 57 VFTP LEEF DVYLV LM A L L L YQ L G K HSA II usage_00001.pdb 60 HRDLKPSNIVVKSDCTLKILD 80 usage_00002.pdb 60 HRDLKPSNIVVKSDCTLKILD 80 usage_00033.pdb 60 HRDLKPSNIVVKSDCTLKILD 80 usage_00096.pdb 59 HRDLKPSNIVVKSDTLKILD- 78 usage_00156.pdb 58 HRDLKPSNIVVKSDTLKILD- 77 usage_00358.pdb 60 HRDLKPSNIVVKSDCTLKILD 80 usage_00625.pdb 61 HRDLKPSNLAVNEDCELKI-- 79 usage_00632.pdb 60 HRDLKPSNIVVKSDCTLKILD 80 usage_00743.pdb 61 HRDLKPSNLAVNEDCELKILD 81 usage_00783.pdb 58 HRDLKPSNIVVKSDTLKILD- 77 HRDLKPSN V D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################