################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:50 2021 # Report_file: c_1374_23.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00389.pdb # 2: usage_00390.pdb # 3: usage_00391.pdb # 4: usage_00475.pdb # 5: usage_00476.pdb # 6: usage_00568.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 57 ( 3.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 57 ( 50.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00389.pdb 1 --QDGWDRYEAAKWLT-RR-WL----E-ANPDDELAKEVRAQLTSEPGRYASYTREY 48 usage_00390.pdb 1 --QDGWDRYEAAKWLT-RR-WL----E-ANPDDELAKEVRAQLTSEPGRYASYTREY 48 usage_00391.pdb 1 --QDGWDRYEAAKWLT-RR-WL----E-ANPDDELAKEVRAQLTSEPGRYASYTREY 48 usage_00475.pdb 1 QFAKREKQALKKLQAS-LK-LYADDSAPALAIKATMEKTKKRFDNYGKY-------- 47 usage_00476.pdb 1 ----ARVLFKTWLEEMYKQVLM----P-VVP----ESHRAMYS-------------- 30 usage_00568.pdb 1 --QDSWDRYEAAKWLT-RR-WL----D-ANPEDELAEEVRAQLSSEPERYATNTREY 48 a p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################