################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:19 2021 # Report_file: c_1381_17.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00070.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00075.pdb # 5: usage_00115.pdb # 6: usage_00116.pdb # 7: usage_00117.pdb # 8: usage_00118.pdb # 9: usage_00274.pdb # 10: usage_00275.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 57 ( 22.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 57 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 ----DIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 46 usage_00071.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00072.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00075.pdb 1 SVGNRSNILATAFTKSLKDPQVK-PRLAALYGLEKSIE-LFDVNTIANK-------- 47 usage_00115.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00116.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00117.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00118.pdb 1 -SEADIRGFVAAVVNG------SAQGAQIGAMLMAIRLRGM-DLEETSVLTQALAQS 49 usage_00274.pdb 1 -RREDLEAFLLGYLRD------EVPDYQVSAWLMAAFLRGL-DPEETLWLTETMARS 49 usage_00275.pdb 1 -RREDLEAFLLGYLRD------EVPDYQVSAWLMAAFLRGL-DPEETLWLTETMARS 49 d f q a Lma l g d eet #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################