################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 16:24:34 2021 # Report_file: c_1043_30.html ################################################################################################ #==================================== # Aligned_structures: 141 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00014.pdb # 9: usage_00022.pdb # 10: usage_00023.pdb # 11: usage_00026.pdb # 12: usage_00028.pdb # 13: usage_00029.pdb # 14: usage_00047.pdb # 15: usage_00058.pdb # 16: usage_00066.pdb # 17: usage_00067.pdb # 18: usage_00071.pdb # 19: usage_00074.pdb # 20: usage_00075.pdb # 21: usage_00093.pdb # 22: usage_00097.pdb # 23: usage_00100.pdb # 24: usage_00101.pdb # 25: usage_00114.pdb # 26: usage_00115.pdb # 27: usage_00123.pdb # 28: usage_00126.pdb # 29: usage_00130.pdb # 30: usage_00131.pdb # 31: usage_00133.pdb # 32: usage_00149.pdb # 33: usage_00150.pdb # 34: usage_00151.pdb # 35: usage_00180.pdb # 36: usage_00181.pdb # 37: usage_00182.pdb # 38: usage_00183.pdb # 39: usage_00184.pdb # 40: usage_00193.pdb # 41: usage_00219.pdb # 42: usage_00222.pdb # 43: usage_00226.pdb # 44: usage_00227.pdb # 45: usage_00228.pdb # 46: usage_00229.pdb # 47: usage_00236.pdb # 48: usage_00269.pdb # 49: usage_00270.pdb # 50: usage_00295.pdb # 51: usage_00304.pdb # 52: usage_00306.pdb # 53: usage_00317.pdb # 54: usage_00318.pdb # 55: usage_00320.pdb # 56: usage_00321.pdb # 57: usage_00322.pdb # 58: usage_00323.pdb # 59: usage_00325.pdb # 60: usage_00326.pdb # 61: usage_00329.pdb # 62: usage_00330.pdb # 63: usage_00336.pdb # 64: usage_00351.pdb # 65: usage_00352.pdb # 66: usage_00353.pdb # 67: usage_00376.pdb # 68: usage_00409.pdb # 69: usage_00410.pdb # 70: usage_00411.pdb # 71: usage_00412.pdb # 72: usage_00413.pdb # 73: usage_00414.pdb # 74: usage_00427.pdb # 75: usage_00428.pdb # 76: usage_00430.pdb # 77: usage_00431.pdb # 78: usage_00433.pdb # 79: usage_00443.pdb # 80: usage_00445.pdb # 81: usage_00446.pdb # 82: usage_00448.pdb # 83: usage_00450.pdb # 84: usage_00451.pdb # 85: usage_00452.pdb # 86: usage_00453.pdb # 87: usage_00454.pdb # 88: usage_00455.pdb # 89: usage_00457.pdb # 90: usage_00460.pdb # 91: usage_00463.pdb # 92: usage_00464.pdb # 93: usage_00465.pdb # 94: usage_00474.pdb # 95: usage_00475.pdb # 96: usage_00476.pdb # 97: usage_00511.pdb # 98: usage_00523.pdb # 99: usage_00524.pdb # 100: usage_00525.pdb # 101: usage_00574.pdb # 102: usage_00575.pdb # 103: usage_00578.pdb # 104: usage_00598.pdb # 105: usage_00599.pdb # 106: usage_00600.pdb # 107: usage_00608.pdb # 108: usage_00612.pdb # 109: usage_00613.pdb # 110: usage_00636.pdb # 111: usage_00641.pdb # 112: usage_00642.pdb # 113: usage_00643.pdb # 114: usage_00644.pdb # 115: usage_00646.pdb # 116: usage_00648.pdb # 117: usage_00649.pdb # 118: usage_00664.pdb # 119: usage_00688.pdb # 120: usage_00695.pdb # 121: usage_00708.pdb # 122: usage_00712.pdb # 123: usage_00720.pdb # 124: usage_00730.pdb # 125: usage_00731.pdb # 126: usage_00742.pdb # 127: usage_00744.pdb # 128: usage_00745.pdb # 129: usage_00747.pdb # 130: usage_00751.pdb # 131: usage_00755.pdb # 132: usage_00756.pdb # 133: usage_00757.pdb # 134: usage_00758.pdb # 135: usage_00764.pdb # 136: usage_00765.pdb # 137: usage_00766.pdb # 138: usage_00771.pdb # 139: usage_00772.pdb # 140: usage_00773.pdb # 141: usage_00775.pdb # # Length: 41 # Identity: 11/ 41 ( 26.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 41 ( 75.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 41 ( 2.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00004.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00005.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00007.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00008.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00011.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00012.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00014.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00022.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00023.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00026.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00028.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00029.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00047.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTR 41 usage_00058.pdb 1 KVQFGTIRGGATSVYFSESNDTDNRMAWNKMLSFKPDAFTK 41 usage_00066.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00067.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00071.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTR 41 usage_00074.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTR 41 usage_00075.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTR 41 usage_00093.pdb 1 EIAYGTTDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00097.pdb 1 EIAYGTTDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00100.pdb 1 EIAYGTTDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00101.pdb 1 EIAYGTTDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00114.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00115.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00123.pdb 1 EIAYGTLDCGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00126.pdb 1 EIAYGTLDSGSTKCFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00130.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00131.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00133.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00149.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00150.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00151.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00180.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00181.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00182.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00183.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00184.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00193.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00219.pdb 1 EIAYGTLDDGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00222.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00226.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00227.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00228.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00229.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00236.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00269.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00270.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00295.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00304.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00306.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00317.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00318.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00320.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00321.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00322.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00323.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00325.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00326.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00329.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00330.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00336.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00351.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00352.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00353.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00376.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00409.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00410.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00411.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00412.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00413.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00414.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00427.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00428.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00430.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00431.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00433.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00443.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00445.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00446.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00448.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00450.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00451.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00452.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00453.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00454.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00455.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00457.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00460.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00463.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00464.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00465.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00474.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00475.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00476.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00511.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00523.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00524.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00525.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00574.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00575.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00578.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00598.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTK 41 usage_00599.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00600.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00608.pdb 1 -IAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 40 usage_00612.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00613.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00636.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00641.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00642.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00643.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00644.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00646.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00648.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00649.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00664.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00688.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00695.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00708.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00712.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00720.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00730.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00731.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00742.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00744.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00745.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00747.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00751.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00755.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00756.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00757.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00758.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00764.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00765.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00766.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00771.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00772.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00773.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 usage_00775.pdb 1 EIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVR 41 iayGT d GsTk fFrrSkiav kmW yM SaePsvF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################