################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:38:15 2021 # Report_file: c_1138_18.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # 8: usage_00031.pdb # 9: usage_00032.pdb # 10: usage_00033.pdb # 11: usage_00108.pdb # 12: usage_00109.pdb # 13: usage_00110.pdb # 14: usage_00111.pdb # 15: usage_00114.pdb # 16: usage_00115.pdb # 17: usage_00116.pdb # 18: usage_00117.pdb # 19: usage_00118.pdb # 20: usage_00231.pdb # 21: usage_00242.pdb # 22: usage_00243.pdb # 23: usage_00244.pdb # 24: usage_00245.pdb # 25: usage_00860.pdb # 26: usage_00861.pdb # 27: usage_00862.pdb # # Length: 136 # Identity: 74/136 ( 54.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/136 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/136 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -LKGPFGCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQT 59 usage_00002.pdb 1 -LKGPFGCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQT 59 usage_00003.pdb 1 -LKGPFGCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQT 59 usage_00027.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00028.pdb 1 GLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 60 usage_00029.pdb 1 GLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 60 usage_00030.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00031.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 usage_00032.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 usage_00033.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 usage_00108.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00109.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00110.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00111.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00114.pdb 1 -LGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 59 usage_00115.pdb 1 GLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 60 usage_00116.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 usage_00117.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00118.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 usage_00231.pdb 1 -LGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 59 usage_00242.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00243.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00244.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00245.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 59 usage_00860.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDR------LAANQLIQKKLADMQT 53 usage_00861.pdb 1 -LRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQ---PLAANQLIQKKLADMQT 56 usage_00862.pdb 1 --RGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQT 58 GPF CLN ARYGI WG LGA E C ARQY LDR LA QL QKKLADM T usage_00001.pdb 60 EIALGIQASLRVGRLFDEGKMAPEMISIVKRNNCGKALDIARQARDMHG-------Y--H 110 usage_00002.pdb 60 EIALGIQASLRVGRLFDEGKMAPEMISIVKRNNCGKALDIARQARDMHG-------G--H 110 usage_00003.pdb 60 EIALGIQASLRVGRLFDEGKMAPEMISIVKRNNCGKALDIARQARDMHG-------EY-H 111 usage_00027.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGSD-EF--G 116 usage_00028.pdb 61 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGS-----DEF-G 114 usage_00029.pdb 61 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 118 usage_00030.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGND---EF--G 114 usage_00031.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------F--G 109 usage_00032.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGD--EF--G 114 usage_00033.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGSD-EF--G 115 usage_00108.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGD--EF--G 115 usage_00109.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------F--G 110 usage_00110.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGND---EF--G 114 usage_00111.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 117 usage_00114.pdb 60 EITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEY--H 117 usage_00115.pdb 61 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 118 usage_00116.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------F--G 109 usage_00117.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------EF-G 111 usage_00118.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 116 usage_00231.pdb 60 EITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEY--H 117 usage_00242.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 117 usage_00243.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------GNGG 112 usage_00244.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEF--G 117 usage_00245.pdb 60 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNG---EF--G 114 usage_00860.pdb 54 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG----------G 103 usage_00861.pdb 57 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------F--G 107 usage_00862.pdb 59 EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLG-------GN-G 110 EI LG L GR D A E S KRN CGKALDIAR ARDM G usage_00001.pdb 111 VMRHAQNLETVNTY-- 124 usage_00002.pdb 111 VMRHAQNLETVNTY-- 124 usage_00003.pdb 112 VMRHAQNLETVNTY-- 125 usage_00027.pdb 117 VARHLVNLEVVNTY-- 130 usage_00028.pdb 115 VARHLVNLEVVNTY-- 128 usage_00029.pdb 119 VARHLVNLEVVNT--- 131 usage_00030.pdb 115 VARHLVNLEVVNTY-- 128 usage_00031.pdb 110 VARHLVNLEVVNTY-- 123 usage_00032.pdb 115 VARHLVNLEVVNTY-- 128 usage_00033.pdb 116 VARHLVNLEVVNTY-- 129 usage_00108.pdb 116 VARHLVNLEVVNTY-- 129 usage_00109.pdb 111 VARHLVNLEVVNTY-- 124 usage_00110.pdb 115 VARHLVNLEVVNT--- 127 usage_00111.pdb 118 VARHLVNLEVVNTY-- 131 usage_00114.pdb 118 VIRHAMNLEAVNTY-- 131 usage_00115.pdb 119 VARHLVNLEVVNTY-- 132 usage_00116.pdb 110 VARHLVNLEVVNTY-- 123 usage_00117.pdb 112 VARHLVNLEVVNTY-- 125 usage_00118.pdb 117 VARHLVNLEVVNTY-- 130 usage_00231.pdb 118 VIRHAMNLEAVNTY-- 131 usage_00242.pdb 118 VARHLVNLEVVNTY-- 131 usage_00243.pdb 113 VARHLVNLEVVNT--- 125 usage_00244.pdb 118 VARHLVNLEVVNT--- 130 usage_00245.pdb 115 VARHLVNLEVVNTYEG 130 usage_00860.pdb 104 VARHLVNLEVVNTY-- 117 usage_00861.pdb 108 VARHLVNLEVVNTY-- 121 usage_00862.pdb 111 VARHLVNLEVVNTY-- 124 V RH NLE VNT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################