################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:33 2021 # Report_file: c_1072_22.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00329.pdb # 2: usage_00400.pdb # 3: usage_00959.pdb # 4: usage_01128.pdb # # Length: 83 # Identity: 16/ 83 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 83 ( 60.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 83 ( 21.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00329.pdb 1 CNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHP-DLGTD 59 usage_00400.pdb 1 --LDSLRFKVAIAKFFGVHIDEVRTRIIGEHGDSMVPLLSATSIGGIPIQKFE--RFK-- 54 usage_00959.pdb 1 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGT---NK 57 usage_01128.pdb 1 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGT---NK 57 LDSaRFrylmgerlGVH schgwviGEHGDS vwSgmnva i l l usage_00329.pdb 60 KDKEQWKEVHKQVVESAYEVIKL 82 usage_00400.pdb 55 --ELPIDEIIEDVKTKG------ 69 usage_00959.pdb 58 DK-QDWKKLHKDVVDSAYEVIKL 79 usage_01128.pdb 58 DK-QDWKKLHKDVVDSAYEVIKL 79 wk hkdVv sa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################