################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:54 2021 # Report_file: c_0461_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01183.pdb # 2: usage_01184.pdb # 3: usage_01185.pdb # 4: usage_01220.pdb # 5: usage_01221.pdb # # Length: 110 # Identity: 90/110 ( 81.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/110 ( 81.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/110 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01183.pdb 1 LYFQSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQ 60 usage_01184.pdb 1 ------RILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQ 54 usage_01185.pdb 1 ------RILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQ 54 usage_01220.pdb 1 ------RILVTGGSGLVGKAIQKV-VAD--GAGEDWVFVSSKDADLTDTAQTRALFEKVQ 51 usage_01221.pdb 1 ----SMRILVTGGSGLVGKAIQKV-VAD--GAGEDWVFVSSKDADLTDTAQTRALFEKVQ 53 RILVTGGSGLVGKAIQKV GEDWVFVSSKDADLTDTAQTRALFEKVQ usage_01183.pdb 61 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 110 usage_01184.pdb 55 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 104 usage_01185.pdb 55 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 104 usage_01220.pdb 52 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 101 usage_01221.pdb 54 PTHVIHLAAMV-G-----KYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 97 PTHVIHLAAMV G KYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################