################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:46 2021 # Report_file: c_0249_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00009.pdb # 9: usage_00011.pdb # # Length: 142 # Identity: 34/142 ( 23.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/142 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/142 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --VLIGLASSGIHSNGYSLVRKVLLEDG-ELIYGR-----------LELPLGEELLKPTK 46 usage_00002.pdb 1 GDVLIALGSSGPHSNGYSLVRKILEVSG-C-----DPQTTE-L---DGKPLADHLLAPTR 50 usage_00003.pdb 1 --VLIALGSSGPHSNGYSLVRKILEVSG-C-----DPQTTE-L---DGKPLADHLLAPTR 48 usage_00004.pdb 1 --VVVGIASSGLHSNGFSLVRKIVAKSS-L-----QYSS-PAPDGCGDQTLGDLLLTPTR 51 usage_00005.pdb 1 --VVVGIASSGLHSNGFSLVRKIVAKSS-L-----QYSS-PAPDGCGDQTLGDLLLTPTR 51 usage_00006.pdb 1 --ALLALPSSGPHTNGYSLIRKVVAG---Q-----DLSA-P-VPE-LGESLKEALLRPHR 47 usage_00007.pdb 1 --ALLALPSSGPHTNGYSLIRKVVAG---Q-----DLSA-P-VPE-LGESLKEALLRPHR 47 usage_00009.pdb 1 --ALVGLPSSGLHSNGYSLVRRIVFEQAKL-----SLDE-I-YEP-LDVPLGEELLKPTR 50 usage_00011.pdb 1 --ALIAVGSSGPHSNGYSLVRKILEVSK-A-----DKNE-R-L---AGKTIGEHLLAPTK 47 SSG H NG SL Rk l LL P usage_00001.pdb 47 IYVKPILELLKN-HEVYGMAHITGGGFIENIPRMLPEGIGAEIELGSWKIQPIFSLLQEV 105 usage_00002.pdb 51 IYVKSVLELIEK-VDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTA 109 usage_00003.pdb 49 IYVKSVLELIEK-VDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTA 107 usage_00004.pdb 52 IYSHSLLPVLRS-GHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQE 110 usage_00005.pdb 52 IYSHSLLPVLRS-GHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQE 110 usage_00006.pdb 48 AYLKEFRLLWEAGVELHAAAHITGGGLPENLPRALPPGLGAEVRRGSWPIPPVFPYLQRL 107 usage_00007.pdb 48 AYLKEFRLLWEAGVELHAAAHITGGGLPENLPRALPPGLGAEVRRGSWPIPPVFPYLQRL 107 usage_00009.pdb 51 IYAKLLRSVRER-FTIKGMAHITGGGLIENIPRMLPPGIGARIQLGSWPILPIFDFLREK 109 usage_00011.pdb 48 IYIKSGLKLIAE-HDIHAISHITGGGFWENIPRVLPEGTKAVIDGKSWEWPVIFQWLQEK 106 Y aH TGGG EN PR LP W F Lq usage_00001.pdb 106 GKLEEKEMFNIFNMGIGMVVA- 126 usage_00002.pdb 110 GNVEHHEMYRTFNCGVGMIIAL 131 usage_00003.pdb 108 GNVEHHEMYRTFNCGVGMIIAL 129 usage_00004.pdb 111 GHLSEEEMARTFNCGVGAVLV- 131 usage_00005.pdb 111 GHLSEEEMARTFNCGVGAVLV- 131 usage_00006.pdb 108 GGIPEEEMYRVFNMGLGMVLVL 129 usage_00007.pdb 108 GGIPEEEMYRVFNMGLGMVLVL 129 usage_00009.pdb 110 GSLEEEEMFSVFNMGIGLVLA- 130 usage_00011.pdb 107 GNVTTHEMYRTFNCGVGLIIA- 127 G EM FN G G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################