################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:36 2021 # Report_file: c_1171_45.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00282.pdb # 3: usage_00650.pdb # 4: usage_00651.pdb # 5: usage_00671.pdb # 6: usage_00725.pdb # 7: usage_00726.pdb # 8: usage_00727.pdb # 9: usage_00728.pdb # 10: usage_00891.pdb # 11: usage_01041.pdb # 12: usage_01045.pdb # 13: usage_01046.pdb # 14: usage_01100.pdb # 15: usage_01101.pdb # 16: usage_01256.pdb # 17: usage_01710.pdb # 18: usage_01711.pdb # 19: usage_01877.pdb # 20: usage_01878.pdb # # Length: 28 # Identity: 3/ 28 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 28 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 28 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00282.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00650.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00651.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00671.pdb 1 EARPIGLFKMIDSGDKD--YKV------ 20 usage_00725.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00726.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00727.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00728.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_00891.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01041.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01045.pdb 1 AVKVLGILG-IDDGQDWKV--------- 18 usage_01046.pdb 1 AVKVLGVLGMIDEGEMD--WKV------ 20 usage_01100.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01101.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01256.pdb 1 PVKVLGILGMIDEGETD--WKV------ 20 usage_01710.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01711.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01877.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 usage_01878.pdb 1 QVKALGIMALLDEGETD--WKVIAIDIN 26 vk lG D G d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################