################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:29 2021 # Report_file: c_1393_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00571.pdb # 2: usage_00573.pdb # 3: usage_00574.pdb # 4: usage_00575.pdb # 5: usage_00682.pdb # 6: usage_01272.pdb # 7: usage_01329.pdb # # Length: 85 # Identity: 0/ 85 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 85 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/ 85 ( 63.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00571.pdb 1 -------LKELEQKLDE-VRKEKDAAV--QSQEFEKAASLRDTEQRLREQVEDTKKSWKE 50 usage_00573.pdb 1 ---------ELEQKLDE-VRKEKDAAV--QSQEFEK----AASLRDTEQRLREQVEDTKK 44 usage_00574.pdb 1 ---------ELEQKLDE-VRKEKDAAV--QSQEFEKAASLRDTEQRLREQVEDTKKSWKE 48 usage_00575.pdb 1 ---------ELEQKLDE-VRKEKDAAV--QSQEFEKAASLRDTEQRLREQVEDTKKSWKE 48 usage_00682.pdb 1 -----AA--DIIDGLRKN---------------------PSIAVPIVLKRLKMKEEEWRE 32 usage_01272.pdb 1 ----------YTVQRNI-LDFPQHVS-----PSKDI----RTASTEADKKLSEFDVEMSM 40 usage_01329.pdb 1 KNEIK----RLSDRLDA-IRHQQADLSLV--EAADK----YAELEKEKATLEAEIARLRE 49 l usage_00571.pdb 51 K----------QGQ--E-------- 55 usage_00573.pdb 45 S--WKEK----QGQ--E-------- 53 usage_00574.pdb 49 K----------QGQ--E-------- 53 usage_00575.pdb 49 K----------QGQ--E-------- 53 usage_00682.pdb 33 A----------QRG--F-NKVWREQ 44 usage_01272.pdb 41 REDVYQR----IV-WLQE------K 54 usage_01329.pdb 50 V--HSQKLSKEAQK-LMK------- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################