################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:27 2021 # Report_file: c_1386_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00059.pdb # 2: usage_00683.pdb # 3: usage_00684.pdb # 4: usage_00685.pdb # 5: usage_00686.pdb # 6: usage_00687.pdb # 7: usage_00688.pdb # 8: usage_00689.pdb # 9: usage_00849.pdb # # Length: 102 # Identity: 20/102 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/102 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/102 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 MLDKLLDAQCMLSEEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIDETK 60 usage_00683.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00684.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00685.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00686.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00687.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00688.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00689.pdb 1 GLDQILSAQHPLS-----PDHNEMLFIVQHQTTELWMKLMLHELRAARDGVKS--D---Q 50 usage_00849.pdb 1 HLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWELDSVREIFQN--G---H 55 Ld L AQ lS p H E LFI HQ ELW K l El Rd usage_00059.pdb 61 TL-------------EIVKRLNRVVLILKLLVDQ-------- 81 usage_00683.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQA-------- 71 usage_00684.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQAWNVLA--- 76 usage_00685.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQA-------- 71 usage_00686.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQAWNVLATMT 79 usage_00687.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQAWNVLATMT 79 usage_00688.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQA-------- 71 usage_00689.pdb 51 LQ-------------PAFKMLARVSRIMDQLVQA-------- 71 usage_00849.pdb 56 VRDERNMLKVVSRMHRVSVILKLLVQQFSILETM-------T 90 k L rv i Lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################