################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:16:28 2021 # Report_file: c_1383_94.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00077.pdb # 2: usage_00294.pdb # 3: usage_00295.pdb # 4: usage_00596.pdb # 5: usage_00597.pdb # 6: usage_00771.pdb # 7: usage_00807.pdb # 8: usage_00813.pdb # 9: usage_00831.pdb # 10: usage_00920.pdb # 11: usage_01003.pdb # 12: usage_01004.pdb # 13: usage_01005.pdb # 14: usage_01006.pdb # 15: usage_01007.pdb # 16: usage_01008.pdb # 17: usage_01009.pdb # 18: usage_01081.pdb # 19: usage_01206.pdb # 20: usage_01207.pdb # 21: usage_01214.pdb # 22: usage_01215.pdb # 23: usage_01273.pdb # 24: usage_01391.pdb # 25: usage_01470.pdb # # Length: 137 # Identity: 12/137 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/137 ( 16.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 100/137 ( 73.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 ---------QSNRELVVDFLSYKLSQKG-YSW------SQ-FSD---------------- 27 usage_00294.pdb 1 --------SQSNRELVVDFLSYKLSQKG-YSW------SQ-FSD---------------- 28 usage_00295.pdb 1 --------SQSNRELVVDFLSYKLSQKG-YSW------SQ-FSD---------------- 28 usage_00596.pdb 1 -----------NRELVVDFLSYKLSQKG-YSW------SQ-F------------------ 23 usage_00597.pdb 1 -----------NRELVVDFLSYKLSQKG-YSW------SQ-F------------------ 23 usage_00771.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW------SQ-FS--DVEENR--------- 34 usage_00807.pdb 1 --------SNRELVVDFLSYKLSQKG---YSW------SQ-------------------- 23 usage_00813.pdb 1 ----------SNRELVVDFLSYKLSQKG-YSW------S--------------------- 22 usage_00831.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW------SQ-FS-DV-EENRTEAPEGTES 43 usage_00920.pdb 1 ----------SNRELVVDFLSYKLSQKG-YSW------S--------------------- 22 usage_01003.pdb 1 --------SQSNRELVVDFLSYKLSQKG-YSW------SQ-FS----------------- 27 usage_01004.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW------SQFS------------------ 28 usage_01005.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW---------------------------- 24 usage_01006.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW------SQ-F------------------ 27 usage_01007.pdb 1 --------SQSNRELVVDFLSYKLSQKG-YSW---------------------------- 23 usage_01008.pdb 1 -------MSQSNRELVVDFLSYKLSQKG-YSW-------S-Q------------------ 26 usage_01009.pdb 1 --------SQSNRELVVDFLSYKLSQKG-YSW------SQ-F------------------ 26 usage_01081.pdb 1 -------QSNRELVVDFLSYKLSQKG---YSW------SQ-------------------- 24 usage_01206.pdb 1 ----------SNRELVVDFLSYKLSQKG-YSW------SQ-FS----------------- 25 usage_01207.pdb 1 ---------QSNRELVVDFLSYKLSQKG-YSW------SQ-FSD---------------- 27 usage_01214.pdb 1 --------SNRELVVDFLSYKLSQKG---YSW------SQ-------------------- 23 usage_01215.pdb 1 -------QSNRELVVDFLSYKLSQKG---YSW------SQ-------------------- 24 usage_01273.pdb 1 GPLGSMSQSNRELVVDFLSYKLSQKG---YSW------SQ-------------------- 31 usage_01391.pdb 1 ------------RALVADFVGYKLRQKGYVCGAGPG--EG-P------------------ 27 usage_01470.pdb 1 ---------QSNRELVVDFLSYKLSQKG-YSW----SQ---------------------- 24 ysw usage_00077.pdb 28 ---------------------------------------IPM-A-AVKQALREAGDEFEL 46 usage_00294.pdb 29 ------------------------------------------VA-AVKQALREAGDEFEL 45 usage_00295.pdb 29 ------------------------------------------VA-AVKQALREAGDEFEL 45 usage_00596.pdb 24 ---------------------------------------TES-E-AVKQALREAGDEFEL 42 usage_00597.pdb 24 ---------------------------------------TES-E-AVKQALREAGDEFEL 42 usage_00771.pdb 35 -----------TEAPEGT----------------------ES-E-AVKQALREAGDEFEL 59 usage_00807.pdb 24 -----------------------------------------M-A-AVKQALREAGDEFEL 40 usage_00813.pdb 23 -----------------------------------------S-E-AVKQALREAGDEFEL 39 usage_00831.pdb 44 EMETPSAINGNPSWHLA-DSPAVNGATGHSSSLDAREV-IPM-A-AVKQALREAGDEFEL 99 usage_00920.pdb 23 ---------------------------------------------AVKQALREAGDEFEL 37 usage_01003.pdb 28 --------------------------------------D-PM-A-AVKQALREAGDEFEL 46 usage_01004.pdb 29 ---------------------------------------IPM-A-AVKQALREAGDEFEL 47 usage_01005.pdb 25 ----------------------------------------PM-A-AVKQALREAGDEFEL 42 usage_01006.pdb 28 -------------------------------------V-IPM-A-AVKQALREAGDEFEL 47 usage_01007.pdb 24 ----------------------------------------PM-A-AVKQALREAGDEFEL 41 usage_01008.pdb 27 ----------------------------------------PM-A-AVKQALREAGDEFEL 44 usage_01009.pdb 27 ----------------------------------------PM-A-AVKQALREAGDEFEL 44 usage_01081.pdb 25 -----------------------------------------M-A-AVKQALREAGDEFEL 41 usage_01206.pdb 26 -----------------------------------------S-E-AVKQALREAGDEFEL 42 usage_01207.pdb 28 -----------------------------------------S-E-AVKQALREAGDEFEL 44 usage_01214.pdb 24 -----------------------------------------M-A-AVKQALREAGDEFEL 40 usage_01215.pdb 25 -----------------------------------------M-A-AVKQALREAGDEFEL 41 usage_01273.pdb 32 -----------------------------------------M-A-AVKQALREAGDEFEL 48 usage_01391.pdb 28 -----------A-------------------------------ADPLHQAMRAAGDEFET 45 usage_01470.pdb 25 -----------------------------------------S-E-AVKQALREAGDEFEL 41 avkQAlReAGDEFEl usage_00077.pdb 47 RYRRAFS---------- 53 usage_00294.pdb 46 RYRRAFSDLTSQLH--- 59 usage_00295.pdb 46 RYRRAFSDLTSQLH--- 59 usage_00596.pdb 43 RYRRAF----------- 48 usage_00597.pdb 43 RYRRAFS---------- 49 usage_00771.pdb 60 RYRRAFSDLTSQLH--- 73 usage_00807.pdb 41 RYRRAFS---------- 47 usage_00813.pdb 40 RYRRAFSDLTSQL---- 52 usage_00831.pdb 100 RYRRAFSDLTSQL---- 112 usage_00920.pdb 38 RYRRAFSDLTS------ 48 usage_01003.pdb 47 RYRRAFSDLTSQ----- 58 usage_01004.pdb 48 RYRRAFSDLTSQ----- 59 usage_01005.pdb 43 RYRRAFSDLTSQ----- 54 usage_01006.pdb 48 RYRRAFSDLTSQ----- 59 usage_01007.pdb 42 RYRRAFSDLTSQ----- 53 usage_01008.pdb 45 RYRRAFSDLTSQ----- 56 usage_01009.pdb 45 RYRRAFSDLTSQ----- 56 usage_01081.pdb 42 RYRRAFSDLTSQ----- 53 usage_01206.pdb 43 RYRRAFSDLTSQL---- 55 usage_01207.pdb 45 RYRRAFSDLTSQL---- 57 usage_01214.pdb 41 RYRRAFSDLTSQL---- 53 usage_01215.pdb 42 RYRRAFSDLTSQ----- 53 usage_01273.pdb 49 RYRRA------------ 53 usage_01391.pdb 46 RFRRTFSDLAAQLHVTP 62 usage_01470.pdb 42 RYRRAFSDLTSQLH--- 55 RyRRa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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