################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:36 2021 # Report_file: c_1261_92.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_01261.pdb # 2: usage_02558.pdb # 3: usage_02559.pdb # 4: usage_02560.pdb # 5: usage_02564.pdb # 6: usage_02565.pdb # 7: usage_02566.pdb # 8: usage_02567.pdb # 9: usage_02658.pdb # 10: usage_02659.pdb # 11: usage_02660.pdb # 12: usage_02661.pdb # 13: usage_02662.pdb # 14: usage_02832.pdb # 15: usage_04553.pdb # 16: usage_04554.pdb # 17: usage_04555.pdb # # Length: 38 # Identity: 8/ 38 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 38 ( 89.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 38 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01261.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02558.pdb 1 -RVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAV-- 35 usage_02559.pdb 1 -RVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 37 usage_02560.pdb 1 -RVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 37 usage_02564.pdb 1 -RVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 37 usage_02565.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAV-- 36 usage_02566.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02567.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02658.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02659.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAV-- 36 usage_02660.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02661.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_02662.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAV-- 36 usage_02832.pdb 1 MRILLATD-GSPQARGAEALAEWLAYKLSAPLTVLF-- 35 usage_04553.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAV-- 36 usage_04554.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 usage_04555.pdb 1 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIA 38 RvLLiag vSPehevsllsAEgvlrhipfPtdlav #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################