################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:32 2021 # Report_file: c_1332_100.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00074.pdb # 2: usage_00075.pdb # 3: usage_00106.pdb # 4: usage_00107.pdb # 5: usage_00268.pdb # 6: usage_00310.pdb # 7: usage_00311.pdb # 8: usage_00312.pdb # 9: usage_00402.pdb # 10: usage_00785.pdb # 11: usage_00861.pdb # 12: usage_00862.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 66 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 66 ( 75.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 ----AEM-----LAE---LMR-YRHGIAVAG--------------T-HGKTTTTAMLSSI 32 usage_00075.pdb 1 --RRAEM-----LAE---LMR-YRHGIAVAG--------------T-HGKTTTTAMLSSI 34 usage_00106.pdb 1 --------QRAQLAE---I-R-FRHGIAVAG--------------T-HGKTTTTAISIYT 32 usage_00107.pdb 1 --------QRAQLAE---I-R-FRHGIAVAG--------------T-HGKTTTTAISIYT 32 usage_00268.pdb 1 ----------AELAE---L-R-FRHGIAIAG--------------T-HGKTTTTAVSSIY 30 usage_00310.pdb 1 ---RAQM----LAEI---M-R-FRHGIAVAG--------------T-HGKTTTTAMISMI 33 usage_00311.pdb 1 ----AQM-----LAE---IMR-FRHGIAVAG--------------T-HGKTTTTAMISMI 32 usage_00312.pdb 1 ----AQM-----LAE---IMR-FRHGIAVAG--------------T-HGKTTTTAMISMI 32 usage_00402.pdb 1 LHYFRDTL-----KR-----E-KKEEFAVTG--------------T-DGKTTTTAVAHVL 34 usage_00785.pdb 1 ---------------IATA--LAERRPVVA-LESSLITTDPSSETASLIEKAVR------ 36 usage_00861.pdb 1 --------QRAQLAE---I-R-FRHGIAVAG--------------T-HGKTTTTAISIYT 32 usage_00862.pdb 1 --------QRAQLAE---I-R-FRHGIAVAG--------------T-HGKTTTTAISIYT 32 ava t gktttt usage_00074.pdb 33 YAEAG- 37 usage_00075.pdb 35 YAEAG- 39 usage_00106.pdb 33 QA--K- 35 usage_00107.pdb 33 QA--K- 35 usage_00268.pdb 31 AE--AG 34 usage_00310.pdb 34 YTQAK- 38 usage_00311.pdb 33 YTQAK- 37 usage_00312.pdb 33 YTQAK- 37 usage_00402.pdb 35 KH-LR- 38 usage_00785.pdb ------ usage_00861.pdb 33 QA--K- 35 usage_00862.pdb 33 QA--K- 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################