################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:04 2021 # Report_file: c_0875_70.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00386.pdb # 2: usage_00387.pdb # 3: usage_00838.pdb # 4: usage_01027.pdb # # Length: 126 # Identity: 57/126 ( 45.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/126 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/126 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00386.pdb 1 ------------PPTFSLFVNSPAFTPAFLMEFLNSYHQQADYLSTHYAEQGNHRLFEAQ 48 usage_00387.pdb 1 --LEVSDRVQSLPPTFSLFVNSPAFTPAFLMEFLNSYHQQADYLSTHYAEQGNHRLFEAQ 58 usage_00838.pdb 1 RPLEVSNRLQDQTTQFQLFLPSPSFTPDFLTEFLVNYHKHAVHILANYSDQGNHLLFEAQ 60 usage_01027.pdb 1 RPLEVSNRLQDQTTQFQLFLPSPSFTPDFLTEFLVNYHKHAVHILANYSDQGNHLLFEAQ 60 F LF SP FTP FL EFL YH A Y QGNH LFEAQ usage_00386.pdb 49 RNLFAGVSFPEFKDSPRWRQTGISVLNTEIKKQVYADGMQFELSPIYHVAAIDIF----- 103 usage_00387.pdb 59 RNLFAGVSFPEFKDSPRWRQTGISVLNTEIKKQVYADGMQFELSPIYHVAAIDIFLKAYG 118 usage_00838.pdb 61 RMIYAGAFFPEFKEAPAWRKSGIDILNREVNVQVYNDGGQFELDPHYHLAAINIFCKALG 120 usage_01027.pdb 61 RMIYAGAFFPEFEA-PAW-RSGIDILNREVNVQVYNDGGQFELDPHYHLAAINIF----- 113 R AG FPEFk P W GI LN E QVY DG QFEL P YH AAI IF usage_00386.pdb ------ usage_00387.pdb 119 SAKRVN 124 usage_00838.pdb 121 IADVNG 126 usage_01027.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################