################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:14:36 2021 # Report_file: c_0066_5.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00032.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00053.pdb # 5: usage_00071.pdb # 6: usage_00090.pdb # 7: usage_00102.pdb # 8: usage_00158.pdb # 9: usage_00191.pdb # 10: usage_00194.pdb # # Length: 222 # Identity: 55/222 ( 24.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/222 ( 39.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/222 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 ----LGVCTLEPPFYIVTEYMPYGNLLDYLRECSR-EEVTAVVLLYMATQISSAMEYLEK 55 usage_00033.pdb 1 ----LGVCTLEPPFYIVTEYMPYGNLLDYLRECSR-EEVTAVVLLYMATQISSAMEYLEK 55 usage_00034.pdb 1 ----LGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 55 usage_00053.pdb 1 ----YAVV-SEEPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER 54 usage_00071.pdb 1 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 59 usage_00090.pdb 1 ----LGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 55 usage_00102.pdb 1 ----EGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGMLRGIASGMRYLAE 54 usage_00158.pdb 1 ----YAVV-SEEPIYIVIEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER 54 usage_00191.pdb 1 ----LGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 55 usage_00194.pdb 1 ----LGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 55 V e P yI tE M G Lld L L Ma qi s M Y e usage_00032.pdb 56 KNFIHRDLAARNCLVGENHVVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 107 usage_00033.pdb 56 KNFIHRDLAARNCLVGENHVVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 107 usage_00034.pdb 56 KNFIHRNLAARNCLVGENHLVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 107 usage_00053.pdb 55 MNYIHRDLRSANILVGNGLICKIADFGLARLI--------EDNE-TARQGAKFPIKWTAP 105 usage_00071.pdb 60 KNFIHRNLAARNCLVGENHLVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 111 usage_00090.pdb 56 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 107 usage_00102.pdb 55 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLSSDPTTSS-----------KIPIRWTAP 103 usage_00158.pdb 55 MNYVHRDLRAANILVGENLVCKVADFGLARLI--------EDNE-TARQGAKFPIKWTAP 105 usage_00191.pdb 56 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM--------TGDTYTAHAGAKFPIKWTAP 107 usage_00194.pdb 56 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM--------TGDTYTAPAGAKFPIKWTAP 107 n HR L a N LVg n KvaDFGL Rl KfPIkWTAP usage_00032.pdb 108 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKV 167 usage_00033.pdb 108 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKV 167 usage_00034.pdb 108 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 167 usage_00053.pdb 106 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISL 165 usage_00071.pdb 112 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 171 usage_00090.pdb 108 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 167 usage_00102.pdb 104 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSL 163 usage_00158.pdb 106 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 165 usage_00191.pdb 108 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 167 usage_00194.pdb 108 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 167 E y F ikSDvW fG ll E t G PYpg V E YRm P CP usage_00032.pdb 168 YELMRACWKWSPADRPSFAETHQAFETMFHDS---------- 199 usage_00033.pdb 168 YELMRACWKWSPADRPSFAETHQAFETMFHDS---------- 199 usage_00034.pdb 168 YELMRACWQWNPSDRPSFAEIHQAFETMFQE----------- 198 usage_00053.pdb 166 HELMIHCWKKDPEERPTFEYLQSFLED--------------- 192 usage_00071.pdb 172 YELMRACWQWNPSDRPSFAEIHQAFET--------------- 198 usage_00090.pdb 168 YELMRACWQWNPSDRPSFAEIHQAFETMFQ------------ 197 usage_00102.pdb 164 HQLMLDCWQKDRNARPRFPQVVSALDKMIRN----------- 194 usage_00158.pdb 166 HDLMCQCWRKDPEERPTFEYLQAFLEDY-------------- 193 usage_00191.pdb 168 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 209 usage_00194.pdb 168 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV---- 205 LM CW p RP F e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################