################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:16 2021 # Report_file: c_0363_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00328.pdb # 2: usage_00388.pdb # 3: usage_00551.pdb # 4: usage_00552.pdb # 5: usage_00553.pdb # 6: usage_00554.pdb # 7: usage_00555.pdb # 8: usage_00556.pdb # 9: usage_00557.pdb # # Length: 112 # Identity: 13/112 ( 11.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/112 ( 22.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/112 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00328.pdb 1 HPADIIRL-AEAFKQYNVVPEVEVYESGMVDAVA-RLIKKGIITQNPLHIQFVLGVPGGM 58 usage_00388.pdb 1 TFKDLEAL-SRIFKENDTKPELECYDIGQIYNTA-FF-HEG-YLEPPLRLQFIHGILGGI 56 usage_00551.pdb 1 TTRTLRAARR-F-QELGIKPELEVFSPGDILFGKQLI-EEG-LIDGVPLFQ-VLGVLWG- 54 usage_00552.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 usage_00553.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 usage_00554.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 usage_00555.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 usage_00556.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 usage_00557.pdb 1 PPELVDWL-AAE-KTYGIKPEVEAFDLS-IFQAA-AQ-AAG-AIVGPLHIQFV-GIKNA- 52 l k kPE E i a G pl Q v G usage_00328.pdb 59 S-GKPKNLMYMMEHLKEEIP--TATWAVAGIGRWHIPTSLIAMVTGGHIRCG 107 usage_00388.pdb 57 G-TAVEDVLF-KQTADRLIGRENYTWSLVGAGRFQPL-GTLAVIGG-DVRVG 104 usage_00551.pdb 55 APAST-ETIYQRNLI---PA--NAQWAAFGIGRDQ-P--AQAALLGGNVRVG 97 usage_00552.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 usage_00553.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 usage_00554.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 usage_00555.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 usage_00556.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 usage_00557.pdb 53 P-VDREVLEFYVQTLKRLSP--DATWTGAGIGRHQLT-ARWSLELGGHCRTG 100 atW GiGR q G R G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################