################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:42:01 2021 # Report_file: c_0033_5.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00044.pdb # 6: usage_00045.pdb # 7: usage_00076.pdb # 8: usage_00077.pdb # 9: usage_00081.pdb # 10: usage_00082.pdb # 11: usage_00085.pdb # 12: usage_00086.pdb # 13: usage_00088.pdb # 14: usage_00089.pdb # 15: usage_00090.pdb # 16: usage_00091.pdb # 17: usage_00114.pdb # 18: usage_00115.pdb # 19: usage_00116.pdb # 20: usage_00117.pdb # 21: usage_00118.pdb # 22: usage_00119.pdb # # Length: 247 # Identity: 47/247 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/247 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/247 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GSIVAIVTPMD-EKGNVRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 59 usage_00002.pdb 1 GSIVAIVTPMD-EKGNVRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 59 usage_00008.pdb 1 GVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRT 59 usage_00009.pdb 1 GVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRT 59 usage_00044.pdb 1 GSIVALVTPMR-NDSVDVHHLRELVEFHIAKGTHALVAAGTTGEAGTLSHSEKLLVIKTV 59 usage_00045.pdb 1 GSIVALVTPMR-NDSVDVHHLRELVEFHIAKGTHALVAAGTTGEAGTLSHSEKLLVIKTV 59 usage_00076.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00077.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00081.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00082.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00085.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00086.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00088.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00089.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00090.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGSTGESATLNHDEHADVVMMT 60 usage_00091.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGSTGESATLNHDEHADVVMMT 60 usage_00114.pdb 1 GSGVAIITPFT-NTGVDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFV 59 usage_00115.pdb 1 GSGVAIITPFT-NTGVDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFV 59 usage_00116.pdb 1 GSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQT 60 usage_00117.pdb 1 GSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQT 60 usage_00118.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00119.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 G A TP L A G TGE T E usage_00001.pdb 60 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 119 usage_00002.pdb 60 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 119 usage_00008.pdb 60 LEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYIS 119 usage_00009.pdb 60 LEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYIS 119 usage_00044.pdb 60 IEQAKERVPVIAGTAMNATKDCIELTQQAMEYGAHAALIMTPAYIKPTQEGLYLHYSHIA 119 usage_00045.pdb 60 IEQAKERVPVIAGTAMNATKDCIELTQQAMEYGAHAALIMTPAYIKPTQEGLYLHYSHIA 119 usage_00076.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00077.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00081.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYWNRPSQEGLYQHFKAIA 120 usage_00082.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYWNRPSQEGLYQHFKAIA 120 usage_00085.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00086.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00088.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00089.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00090.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00091.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00114.pdb 60 IDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVS 119 usage_00115.pdb 60 IDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVS 119 usage_00116.pdb 61 VKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVA 120 usage_00117.pdb 61 VKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVA 120 usage_00118.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00119.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 PVI G N T G L TP GL H usage_00001.pdb 120 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 175 usage_00002.pdb 120 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 175 usage_00008.pdb 120 ERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIEANPDIDQIDRTVSLTKQARSD 179 usage_00009.pdb 120 ERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIEANPDIDQIDRTVSLTKQARSD 179 usage_00044.pdb 120 QSVAIPIILYNVPGRTACDMLPETVARLAK-ISNIIGIEATGQMTRLQQILRLC---EGS 175 usage_00045.pdb 120 QSVAIPIILYNVPGRTACDMLPETVARLAK-ISNIIGIEATGQMTRLQQILRLC---EGS 175 usage_00076.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00077.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00081.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00082.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00085.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00086.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00088.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00089.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00090.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00091.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00114.pdb 120 DAVSTPIIIYNVPGRTGLNITPGTLKELCE-DKNIVAVEASGNISQIAQIKALC---GDK 175 usage_00115.pdb 120 DAVSTPIIIYNVPGRTGLNITPGTLKELCE-DKNIVAVEASGNISQIAQIKALC---GDK 175 usage_00116.pdb 121 ASTDIPQILYNVPGRTAVDMLPETIAQLVE-VPNIIGVDATGDVARVKQLRDLC---GND 176 usage_00117.pdb 121 ASTDIPQILYNVPGRTAVDMLPETIAQLVE-VPNIIGVDATGDVARVKQLRDLC---GND 176 usage_00118.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 usage_00119.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIEATGNLTRVNQIKELV---SDD 176 YNVP RT P T N A L usage_00001.pdb 176 FVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERL---- 231 usage_00002.pdb 176 FVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERL---- 231 usage_00008.pdb 180 FMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKL---- 235 usage_00009.pdb 180 FMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSG---------------- 223 usage_00044.pdb 176 IDVYSGDDLTAAQWLLSGAKGVISVTANVAAKLMAKMCDLAMDDDQAGCLRIQEQL---- 231 usage_00045.pdb 176 IDVYSGDDLTAAQWLLSGAKGVISVTANVAAKLMAKMCDLAMDDDQAGCLRIQEQL---- 231 usage_00076.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00077.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00081.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00082.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00085.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00086.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL---- 232 usage_00088.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL---- 232 usage_00089.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL---- 232 usage_00090.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL---- 232 usage_00091.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL---- 232 usage_00114.pdb 176 LDIYSGNDDQIIPILALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSL--- 232 usage_00115.pdb 176 LDIYSGNDDQIIPILALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSL--- 232 usage_00116.pdb 177 FLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIK--- 233 usage_00117.pdb 177 FLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIK--- 233 usage_00118.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 usage_00119.pdb 177 FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH 236 SG D G GVISV N C usage_00001.pdb ------- usage_00002.pdb ------- usage_00008.pdb ------- usage_00009.pdb ------- usage_00044.pdb ------- usage_00045.pdb ------- usage_00076.pdb 237 NKLFVEP 243 usage_00077.pdb 237 NKLFVEP 243 usage_00081.pdb 237 NKLFVEP 243 usage_00082.pdb 237 NKLFVEP 243 usage_00085.pdb 237 NKLFVEP 243 usage_00086.pdb ------- usage_00088.pdb ------- usage_00089.pdb ------- usage_00090.pdb ------- usage_00091.pdb ------- usage_00114.pdb ------- usage_00115.pdb ------- usage_00116.pdb ------- usage_00117.pdb ------- usage_00118.pdb 237 NKLFVEP 243 usage_00119.pdb 237 NKLFVEP 243 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################