################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:27 2021 # Report_file: c_0777_107.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00398.pdb # 2: usage_00399.pdb # 3: usage_00400.pdb # 4: usage_00401.pdb # 5: usage_00764.pdb # 6: usage_00765.pdb # 7: usage_00889.pdb # 8: usage_01110.pdb # 9: usage_01138.pdb # 10: usage_01139.pdb # 11: usage_01140.pdb # 12: usage_01141.pdb # 13: usage_01142.pdb # 14: usage_01143.pdb # 15: usage_01144.pdb # 16: usage_01145.pdb # 17: usage_01413.pdb # 18: usage_01465.pdb # 19: usage_01479.pdb # 20: usage_01545.pdb # 21: usage_01546.pdb # # Length: 75 # Identity: 3/ 75 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 75 ( 12.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 75 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00398.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_00399.pdb 1 ---PCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 47 usage_00400.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_00401.pdb 1 ---PCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 47 usage_00764.pdb 1 ESIKVGVSIG----L-Q--QNVETLLQLVNQYVDQGYERVKLKI-A-P-NKDIQFVEAVR 50 usage_00765.pdb 1 ESIKVGVSIG----L-Q--QNVETLLQLVNQYVDQGYERVKLKI-A-P-NKDIQFVEAVR 50 usage_00889.pdb 1 --VPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 48 usage_01110.pdb 1 -NYIESGAAL----GIPEDGRIETLIHQVEESLQEGYRRIKIKI-K-P-GWDVEPLQETR 52 usage_01138.pdb 1 ---PCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 47 usage_01139.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01140.pdb 1 ---PCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 47 usage_01141.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01142.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01143.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01144.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01145.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01413.pdb 1 DSVQCYNTS-GGFL--H--TPLDQVLKNVVISRENGIGGIKLAVGQPNCAEDIRRLTAVR 55 usage_01465.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01479.pdb 1 DDVALYRAI-----S-Q--EAPEIMAKKIEGYAAEGYTKFQLKVGG-DANDDINRIHATR 51 usage_01545.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 usage_01546.pdb 1 DSVPCGVSVG----I-M--DTIPQLLDVVGGYLDEGYVRIKLKI-E-P-GWDVEPVRAVR 50 v Gy klk D a R usage_00398.pdb 51 ERFGDDVLLQVDA-- 63 usage_00399.pdb 48 ERFGDDVLLQVDA-- 60 usage_00400.pdb 51 ERFGDDVLLQVDA-- 63 usage_00401.pdb 48 ERFGDDVLLQVDA-- 60 usage_00764.pdb 51 KSFPKLSLMADA--- 62 usage_00765.pdb 51 KSFPKLSLMADA--- 62 usage_00889.pdb 49 ERFGDDVLLQVDA-- 61 usage_01110.pdb 53 RAVGDHFPLWTDA-- 65 usage_01138.pdb 48 ERFGDDVLLQVDA-- 60 usage_01139.pdb 51 ERFGDDVLLQVDA-- 63 usage_01140.pdb 48 ERFGDDVLLQVDA-- 60 usage_01141.pdb 51 ERFGDDVLLQVDA-- 63 usage_01142.pdb 51 ERFGDDVLLQVDA-- 63 usage_01143.pdb 51 ERFGDDVLLQVDA-- 63 usage_01144.pdb 51 ERFGDDVLLQVDA-- 63 usage_01145.pdb 51 ERFGDDVLLQVDA-- 63 usage_01413.pdb 56 EALGDEFPLMVDA-- 68 usage_01465.pdb 51 ERFGDDVLLQVDA-- 63 usage_01479.pdb 52 SVLKKSDLLVADANT 66 usage_01545.pdb 51 ERFGDDVLLQVDA-- 63 usage_01546.pdb 51 ERFGDDVLLQVDA-- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################