################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:37 2021 # Report_file: c_0300_81.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00007.pdb # 4: usage_00043.pdb # 5: usage_00268.pdb # 6: usage_00278.pdb # 7: usage_00279.pdb # 8: usage_00280.pdb # 9: usage_00308.pdb # 10: usage_00309.pdb # 11: usage_00503.pdb # 12: usage_00533.pdb # 13: usage_00578.pdb # # Length: 98 # Identity: 24/ 98 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 98 ( 72.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 98 ( 5.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00004.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00007.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00043.pdb 1 TVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAA 60 usage_00268.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00278.pdb 1 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAA 60 usage_00279.pdb 1 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAA 60 usage_00280.pdb 1 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAA 60 usage_00308.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00309.pdb 1 RVFVSAAAGAVGQIVGQFAKQFGCYVVGSAGSDEKVNLLKTKFGFDEAFNYKKEPDLTKA 60 usage_00503.pdb 1 -VLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEYLINASKE-DILRQ 57 usage_00533.pdb 1 TVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAA 60 usage_00578.pdb 1 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAA 60 V vsAA GaVGq vgQ aK GcyvvgsAgs EKv llK fGfd afNyk E Dl a usage_00003.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAA- 96 usage_00004.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAA- 96 usage_00007.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAAC 97 usage_00043.pdb 61 LKRYFP-DGIDIYFENVGGKMLDAVLVNMKLYGRIAVC 97 usage_00268.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAAC 97 usage_00278.pdb 61 LKRCFP-NGIDIYFENVGGKMLDAVLVNMNMHGRIAVC 97 usage_00279.pdb 61 LKRCFP-NGIDIYFENVGGKMLDAVLVNMNMHGRIAVC 97 usage_00280.pdb 61 LKRCFP-NGIDIYFENVGGKMLDAVLVNMNMHGRIAV- 96 usage_00308.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAAC 97 usage_00309.pdb 61 LKRYFP-EGIDIYFENVGGPMLEAVLHNMRIKGRIAAC 97 usage_00503.pdb 58 VLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSF 95 usage_00533.pdb 61 LKRYFP-DGIDIYFENVGGKMLDAVLVNMKLYGRIAVC 97 usage_00578.pdb 61 LKRCFP-NGIDIYFENVGGKMLDAVLVNMNMHGRIAVC 97 lkr fp GiDiyFenVGg ml avL nm Gria #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################