################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:18 2021 # Report_file: c_0398_119.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00012.pdb # 2: usage_00014.pdb # 3: usage_00021.pdb # 4: usage_00027.pdb # 5: usage_00049.pdb # 6: usage_00067.pdb # 7: usage_00125.pdb # 8: usage_00126.pdb # 9: usage_00163.pdb # 10: usage_00315.pdb # 11: usage_00419.pdb # # Length: 79 # Identity: 54/ 79 ( 68.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 79 ( 68.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 79 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSKDKSSTEEKI---IIDG 57 usage_00014.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSN---GSSTEEK--IIDG 55 usage_00021.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSN---GSSTEEKIIID-G 56 usage_00027.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKYVTSK---DKSSTYEKFNEKG 57 usage_00049.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKFVTSK---DKSSTFEKFNEKG 57 usage_00067.pdb 1 GVLEGVKADKCKVKLTISDDLGQTTLEVFKEDGKTLVSKKVTSK---DKSSTEEKFNEKG 57 usage_00125.pdb 1 GVLEGVKADKCKVKLTISDDLGQTTLEVFKEDGKTLVSKKVTSK---DKSSTEEKFNEKG 57 usage_00126.pdb 1 GVLEGVKADKCKVKLTISDDLGQTTLEVFKEDGKTLVSKKVTSK---DKSSTEEKFNEKG 57 usage_00163.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSK---DKSSTEEKFNEKG 57 usage_00315.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSK---DKIIIIIKFNEKG 57 usage_00419.pdb 1 GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSK---DKVLADVKFNEKG 57 GVLEGVKAD KVKLTISDDLGQTTLEVFK DG TLVSK VTS G usage_00012.pdb 58 IIIEKIITRADGTRLEYTG 76 usage_00014.pdb 56 IIIEKIITRADGTRLEYTG 74 usage_00021.pdb 57 IIIEKIITRADGTRLEYTG 75 usage_00027.pdb 58 EVSEKYITRADGTRLEYTG 76 usage_00049.pdb 58 EVSEKFITRADGTRLEYTG 76 usage_00067.pdb 58 EVSEKIITRADGTRLEYTG 76 usage_00125.pdb 58 EVSEKIITRADGTRLEYTG 76 usage_00126.pdb 58 EVSEKIITRADGTRLEYTG 76 usage_00163.pdb 58 EVSEKIITRADGTRLEYTG 76 usage_00315.pdb 58 EVSEKIITRADGTRLEYTG 76 usage_00419.pdb 58 EVSEKIITRADGTRLEYTG 76 EK ITRADGTRLEYTG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################