################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:29 2021 # Report_file: c_0022_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00002.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00026.pdb # # Length: 287 # Identity: 27/287 ( 9.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/287 ( 35.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/287 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 DQHGRFIESY-RGVGVDTSNLVVDQEG-HKTGLAFTEIK--SPE-ECSIL-YRQDVADLY 54 usage_00019.pdb 1 --FGYNAIEWLRGQGVDVSHMKIDPS--APTGIFFIQRHYPVPL-KSESIYYRKGSAGSK 55 usage_00020.pdb 1 DEFGYNAIEWLRGQGVDVSHMKIDPS--APTGIFFIQRHYPVPL-KSESIYYRKGSAGSK 57 usage_00026.pdb 1 -PLGDAAAGHLRKFGVKTDYIARG---GNRIGIYFLEIG--ASQRPSKVVYDRAHSAISE 54 G a Rg GVd s d tGi F p s yR sA s usage_00002.pdb 55 LSPEEVNEA-YIRRSKLLLVSGTALS-KSPSREAVLKAIRLAKRNDVKVVFELDYRPYSW 112 usage_00019.pdb 56 LSPEDVDEE-YVKSADLVHSSGITLAISSTAKEAVYKAFEIA---S-NRSFDTNIRLKLW 110 usage_00020.pdb 58 LSPEDVDEE-YVKSADLVHSSGITLAISSTAKEAVYKAFEIA---S-NRSFDTNIRLKLW 112 usage_00026.pdb 55 AKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLW 114 lspEdvdee y a l h SGitl s eav kA A sfd n R lW usage_00002.pdb 113 ETPEETAVYYSLVAE--QSDIVIGTREEFDVLENRTEKG-------------DNDETIRY 157 usage_00019.pdb 111 -SAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ES-----------DPDKAAKA 153 usage_00020.pdb 113 -SAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ES-----------DPDKAAKA 155 usage_00026.pdb 115 -TKEEAQKVI-PF-E--YVDVLIANEEDIEKVLG-----ISVEGLNREAYAKIAEEVTRK 164 EEa i lI d lg d d usage_00002.pdb 158 LFKHSPELIVIKHGV------EGS-FAYTK-AGEAYRGYAYKTKVLKTFGAGDSYASAFL 209 usage_00019.pdb 154 FS-DYAEIIVMKLGP------KGA-IVYY--DGKKYYSSGYQVPVEDVTGAGDALGGTFL 203 usage_00020.pdb 156 FS-DYAEIIVMKLGP------KGA-IVYY--DGKKYYSSGYQVPVEDVTGAGDALGGTFL 205 usage_00026.pdb 165 Y---NFKTVGITLRESISATVNYWSVVF--ENGQPHFSNRYEIHIVDRVGAGDSFAGALI 219 e iv klg g vy G y s Y v d GAGD g fl usage_00002.pdb 210 YALISGKGIETALKYGSASASIVVSK------APSVEEIEALIEKD- 249 usage_00019.pdb 204 SLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREMK 250 usage_00020.pdb 206 SLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREMK 252 usage_00026.pdb 220 YGSL-GFDSQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG-- 262 Gf ekal ya as l v i p IE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################