################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:11 2021 # Report_file: c_1209_66.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00078.pdb # 2: usage_01333.pdb # 3: usage_01690.pdb # 4: usage_01691.pdb # # Length: 57 # Identity: 14/ 57 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 57 ( 82.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 57 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 NYLSTIQVKEGTESNTSLVEWSGTFTPVAVSDEEAINLVHGIYSDGLKALQHAFLD- 56 usage_01333.pdb 1 -YVGNLHLLPVTIDDTTFVEWSGSWESA-S--TEAVE-YNTVYRSLLADLAAEF--- 49 usage_01690.pdb 1 NYLSTIQVKEGTESNTSLVEWSGTFTPVEVSDEEAINLFHGIYSDGLKALQQAFLD- 56 usage_01691.pdb 1 NYLSTIQVKEGTESNTSLVEWSGTFTPVEVSDEEAINLFHGIYSDGLKALQQAFLDL 57 YlstiqvkegTesnTslVEWSGtftpv v eEAin hgiYsdgLkaLq aF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################