################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:32 2021 # Report_file: c_0270_29.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00261.pdb # 2: usage_00264.pdb # 3: usage_00266.pdb # 4: usage_00269.pdb # # Length: 221 # Identity: 117/221 ( 52.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 119/221 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 102/221 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 ---------------------------TVFLDRLAVIFRHTNPIVHPCQKVIQEIWPVLS 33 usage_00264.pdb 1 PLDKITECLSELCSVQVM--ALKKLDPTVFLDRLAVIFRHTNPIVHPCQKVIQEIWPVLS 58 usage_00266.pdb 1 PLDKITECLSELCSVQVM--ALKKLDPTVFLDRLAVIFRHTNPIVHPCQKVIQEIWPVLS 58 usage_00269.pdb 1 --------LSELCSVQVALK----KDPTVFLDRLAVIFRH---------------WPVLS 33 TVFLDRLAVIFRH WPVLS usage_00261.pdb 34 ETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSI 93 usage_00264.pdb 59 ETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSI 118 usage_00266.pdb 59 ETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSI 118 usage_00269.pdb 34 ETLNKHRADNRIVERCCRCLRFAVR-----------PLVT-QVNVYHVHQHSCFLYLGS- 80 ETLNKHRADNRIVERCCRCLRFAVR PLVT mVNVYHVHQHSCFLYLGS usage_00261.pdb 94 LVDEYGMEEGCRQGLLD-MLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPV 152 usage_00264.pdb 119 LVDEYGMEEGCRQGLLD-MLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPV 177 usage_00266.pdb 119 LVDEYGMEEGCRQGLLD-MLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPV 177 usage_00269.pdb 81 -----------------LDLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSP- 122 mLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSP usage_00261.pdb 153 TLLRSQ-VVIPILQWAIASTTLDHRDANCSVMRFLRDLIHT 192 usage_00264.pdb 178 TLLRSQ-VVIPILQWAIAST--------------------- 196 usage_00266.pdb 178 TLLRSQ-VVIPILQWAIAST--------------------- 196 usage_00269.pdb 123 ------VVVIPILQWAIAST--------------------- 136 VVIPILQWAIAST #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################