################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:27 2021 # Report_file: c_0611_44.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00215.pdb # 2: usage_00410.pdb # 3: usage_00411.pdb # 4: usage_00412.pdb # 5: usage_00413.pdb # 6: usage_00474.pdb # 7: usage_00475.pdb # 8: usage_00534.pdb # 9: usage_00654.pdb # 10: usage_00655.pdb # # Length: 98 # Identity: 7/ 98 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 98 ( 18.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 98 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00215.pdb 1 ------------DQDVA----FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 37 usage_00410.pdb 1 ---------------------FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 32 usage_00411.pdb 1 ---------------------FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 32 usage_00412.pdb 1 QDV-----------------AFDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 36 usage_00413.pdb 1 QDV-----------------AFDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 36 usage_00474.pdb 1 ---KEVRDEFDAAMVEFGQYFADDFLTSFD-------FGRFTRFADIGGGRGQFLAGVLT 50 usage_00475.pdb 1 ---------------S----RGGLKLEKALKEFHLEI--NGKTCLDIGSSTGGFTDVL-Q 38 usage_00534.pdb 1 ---------------------FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 32 usage_00654.pdb 1 ------------DQDVA----FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 37 usage_00655.pdb 1 ---------------------FDAPAAAYD-------WTNVRHVLDVGGGKGGFAAAIAR 32 d d n lD Ggg GgF a usage_00215.pdb 38 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 73 usage_00410.pdb 33 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 68 usage_00411.pdb 33 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 68 usage_00412.pdb 37 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 72 usage_00413.pdb 37 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 72 usage_00474.pdb 51 AVPSSTGVLVDGPAV--AASAHKFLASQNLTERVEVRI 86 usage_00475.pdb 39 NGA-KLVYALDVGTNQL----AWKIRS---DERVVVE- 67 usage_00534.pdb 33 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 68 usage_00654.pdb 38 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 73 usage_00655.pdb 33 RAPHVSATVLEMAGT--VDTARSYLKDEGLSDRVDVVE 68 p l l RV V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################