################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:34 2021 # Report_file: c_1349_35.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00027.pdb # 2: usage_00079.pdb # 3: usage_00080.pdb # 4: usage_00081.pdb # 5: usage_00122.pdb # 6: usage_00123.pdb # 7: usage_00490.pdb # 8: usage_00541.pdb # 9: usage_00552.pdb # 10: usage_00595.pdb # 11: usage_00596.pdb # 12: usage_00642.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 43 ( 2.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 43 ( 69.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 IEEVKEEVKEIIEYLK--D-PVKFQ------KLGGR-PP---- 29 usage_00079.pdb 1 -EEAIEELKEVVEFLK--D-PSKFN------RIGAR-MP---- 28 usage_00080.pdb 1 -EEAIEELKEVVEFLK--D-PSKFN------RIGAR-MP---- 28 usage_00081.pdb 1 -EEAIEELKEVVEFLK--D-PSKFN------RIGAR-MP---- 28 usage_00122.pdb 1 NEEAKEEVVEIVDFLK--Y-PERYA------NLGAK-IP---- 29 usage_00123.pdb 1 NEEAKEEVVEIVDFLK--Y-PERYA------NLGAK-IP---- 29 usage_00490.pdb 1 ------DDEEVAE-H---T-NLETH------FIDSSGLIS--- 23 usage_00541.pdb 1 --SKKDLKDEIEFLQE--H-SDHFS---------------YD- 22 usage_00552.pdb 1 -SEQLGKIREMIELPL--KHPELFERLGITPP-KGV-IL--YG 36 usage_00595.pdb 1 -EEAKEELKEIVEFLK--N-PSRFH------EMGAR-IP---- 28 usage_00596.pdb 1 -EEAKEELKEIVEFLK--N-PSRFH------EMGAR-IP---- 28 usage_00642.pdb 1 -----RSNEEHKLS--VQL-RKKCE------KRGLI-VP---- 24 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################