################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:19 2021 # Report_file: c_0378_68.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00367.pdb # 2: usage_00368.pdb # 3: usage_00756.pdb # 4: usage_01007.pdb # 5: usage_01008.pdb # 6: usage_01009.pdb # 7: usage_01010.pdb # # Length: 104 # Identity: 16/104 ( 15.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/104 ( 43.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/104 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00367.pdb 1 --VIEYEREGDLVKVEVSVGKEIPHPNTPEHHIAWIELYFHPEGGQFPILVGRVEFTNHS 58 usage_00368.pdb 1 VPVIEYEREGDLVKVEVSVGKEIPHPNTPEHHIAWIELYFHPEGGQFPILVGRVEFTNHS 60 usage_00756.pdb 1 --EMKLSG----NHVDIRCGATVMHPATEKHYIGTIRLFGITKEGNVTLELGCQQIWPG- 53 usage_01007.pdb 1 --IIEIEKEGELYKITIEVGKEVKHPNEPSHHIQWVDLYFEPEGKE-PTHIARIEFKAHG 57 usage_01008.pdb 1 --IIEIEKEGELYKITIEVGKEVKHPNEPSHHIQWVDLYFEPEGKE-PTHIARIEFKAHG 57 usage_01009.pdb 1 --IIEIEKEGELYKITIEVGKEVKHPNEPSHHIQWVDLYFEPEGKE-PTHIARIEFKAHG 57 usage_01010.pdb 1 SPIIEIEKEGELYKITIEVGKEVKHPNEPSHHIQWVDLYFEPEGKE-PTHIARIEFKAHG 59 ie e k vGke HPn p HhI w Lyf peg p r ef h usage_00367.pdb 59 ---DPLTEPRAVFFFKTS--KKGKLYALSYCNIHGLWENEVQ-- 95 usage_00368.pdb 61 ---DPLTEPRAVFFFKTS--KKGKLYALSYCNIHGLWENEVQLE 99 usage_00756.pdb 54 -----LGEPVASFRVCD-LEKYKGLLAVAYCNLHGCWENYME-- 89 usage_01007.pdb 58 EYNN-YTEPKAIVYAKLE--GKGKLIAISYCTLHGLWKTEKE-- 96 usage_01008.pdb 58 EYNN-YTEPKAIVYAKLE--GKGKLIAISYCTLHGLWKTE---- 94 usage_01009.pdb 58 EYNN-YTEPKAIVYAKLE--GKGKLIAISYCTLHGLWKTEKE-- 96 usage_01010.pdb 60 EYNN-YTEPKAIVYAKLE--GKGKLIAISYCTLHGLWKTEKE-- 98 tEP A k kgkL A sYC HGlW e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################