################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:24 2021 # Report_file: c_1442_976.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00433.pdb # 2: usage_00434.pdb # 3: usage_00435.pdb # 4: usage_00436.pdb # 5: usage_04547.pdb # 6: usage_04548.pdb # 7: usage_04549.pdb # 8: usage_04550.pdb # 9: usage_09921.pdb # 10: usage_09939.pdb # 11: usage_09940.pdb # 12: usage_09941.pdb # 13: usage_13059.pdb # 14: usage_20677.pdb # # Length: 18 # Identity: 1/ 18 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 18 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 18 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00433.pdb 1 -AVIRTPSGYLPGL---- 13 usage_00434.pdb 1 -AVIRTPSGYLPGL---- 13 usage_00435.pdb 1 -AVIRTPSGYLPGL---- 13 usage_00436.pdb 1 -AVIRTPSGYLPGL---- 13 usage_04547.pdb 1 -STVKTPKGYLPGL---- 13 usage_04548.pdb 1 -STVKTPKGYLPGL---- 13 usage_04549.pdb 1 -STVKTPKGYLPGL---- 13 usage_04550.pdb 1 -STVKTPKGYLPGL---- 13 usage_09921.pdb 1 -STVSTPKGYLPGL---- 13 usage_09939.pdb 1 -STIKTPKGYLPGL---- 13 usage_09940.pdb 1 -STIKTPKGYLPGL---- 13 usage_09941.pdb 1 -STIKTPKGYLPGL---- 13 usage_13059.pdb 1 FKTFIGPG-GN---MPGY 14 usage_20677.pdb 1 -GEAETPAGPLPYI---- 13 tP l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################