################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:50 2021 # Report_file: c_1373_56.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01066.pdb # 2: usage_01067.pdb # 3: usage_01068.pdb # 4: usage_01069.pdb # 5: usage_01371.pdb # 6: usage_01372.pdb # # Length: 52 # Identity: 13/ 52 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 52 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 52 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01066.pdb 1 SNAVKDRQIQKTKVAIYNAFISLLQE-NDYSKITVQDVIGLANVGRSTFYSH 51 usage_01067.pdb 1 SNAVKDRQIQKTKVAIYNAFISLLQE-NDYSKITVQDVIGLANVGRSTFYS- 50 usage_01068.pdb 1 --AVKDRQIQKTKVAIYNAFISLLQE-NDYSKITVQDVIGLANVGRSTFYSH 49 usage_01069.pdb 1 ---VKDRQIQKTKVAIYNAFISLLQE-NDYSKITVQDVIGLANVGRSTFYS- 47 usage_01371.pdb 1 -----DLRTQKTQTKLYTVLERFYVEDRTFESISIKDLCEQARVSRATFYRH 47 usage_01372.pdb 1 -------RTQKTQTKLYTVLERFYVEDRTFESISIKDLCEQARVSRATFYRH 45 QKT Y E I D A V R TFY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################