################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:49 2021 # Report_file: c_0300_27.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00269.pdb # 2: usage_00363.pdb # 3: usage_00364.pdb # 4: usage_00365.pdb # 5: usage_00499.pdb # # Length: 120 # Identity: 11/120 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/120 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/120 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00269.pdb 1 ----ITQVSRFDPWKGIFDVIEIYRKVKEK-IPGVQLLLVGVMAHDDPEGWIYFEKTLRK 55 usage_00363.pdb 1 DEKVVIHVSNFRKVKRVQDVIRVFRNIAGK-T-KAKLLLVGD-------G-PEKSTACEL 50 usage_00364.pdb 1 DEKVVIHVSNFRKVKRVQDVIRVFRNIAGK-T-KAKLLLVGD-------G-PEKSTACEL 50 usage_00365.pdb 1 DEKVVIHVSNFRKVKRVQDVIRVFRNIAGK-T-KAKLLLVGD-------G-PEKSTACEL 50 usage_00499.pdb 1 -PFKIAMVGRYSNEKNQSVLIKAVALSK--YKQDIVLLLKGK-------G-PDEKKIKLL 49 Vs f K dvI r LLLvG G p l usage_00269.pdb 56 IG---EDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRAGFGLTVTEAMWKGKPVIG- 111 usage_00363.pdb 51 IRKYGLEDQVLMLGN---Q--DRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGT 105 usage_00364.pdb 51 IRKYGLEDQVLMLGN---Q--DRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGT 105 usage_00365.pdb 51 IRKYGLEDQVLMLGN---Q--DRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGT 105 usage_00499.pdb 50 AQKLGVK--AE-FGF---VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIA 103 i v lgn v sdl l s esfgl lEAm G p ig #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################