################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:36 2021 # Report_file: c_1408_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00250.pdb # 2: usage_00251.pdb # 3: usage_00497.pdb # 4: usage_00498.pdb # 5: usage_00499.pdb # 6: usage_00503.pdb # 7: usage_00504.pdb # 8: usage_00510.pdb # 9: usage_00513.pdb # 10: usage_01416.pdb # 11: usage_01417.pdb # # Length: 111 # Identity: 107/111 ( 96.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/111 ( 96.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/111 ( 2.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00250.pdb 1 SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 60 usage_00251.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 57 usage_00497.pdb 1 SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFAN 60 usage_00498.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFAN 57 usage_00499.pdb 1 SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFAN 60 usage_00503.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFAN 57 usage_00504.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFAN 57 usage_00510.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 57 usage_00513.pdb 1 ---LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 57 usage_01416.pdb 1 SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 60 usage_01417.pdb 1 SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFAN 60 LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLA SAEEREHGLGFVDFAN usage_00250.pdb 61 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 111 usage_00251.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_00497.pdb 61 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 111 usage_00498.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_00499.pdb 61 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 111 usage_00503.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_00504.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_00510.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_00513.pdb 58 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 108 usage_01416.pdb 61 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 111 usage_01417.pdb 61 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH 111 KRNIPIELQAVPAPVSAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################