################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:50 2021 # Report_file: c_0578_25.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00027.pdb # 3: usage_00083.pdb # 4: usage_00177.pdb # 5: usage_00178.pdb # 6: usage_00179.pdb # # Length: 82 # Identity: 5/ 82 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 82 ( 23.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 82 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 P--VLVYGLDQSK-NCDRVFNVFCL--YGN---VEKVKF-KSKPGAA--VEADGYAVDRA 49 usage_00027.pdb 1 -PVLMVYGLDQSKMNCDRVFNVFCL--YGN---VEKVKFMKSKPGAAMVEMADGYAVDRA 54 usage_00083.pdb 1 --LICLFPLSD-KVSPSLICQFLQEEIHINEKDIRKILLVSDF-NGAIIIFRDSKFAAKM 56 usage_00177.pdb 1 -TVLLVSNLNEEMVTPQSLFTLFGV--YGD---VQRVKILYNKKDSALIQMADGNQSQLA 54 usage_00178.pdb 1 -TVLLVSNLNEEMVTPQSLFTLFGV--YGD---VQRVKILYNKKDSALIQMADGNQSQLA 54 usage_00179.pdb 1 -TVLLVSNLNEEMVTPQSLFTLFGV--YGD---VQRVKILYNKKDSALIQMADGNQSQLA 54 v L f f yg v vk k A aDg a usage_00004.pdb 50 ITHLNNNFFGQ-KNVCV----- 65 usage_00027.pdb 55 ITHLNNNFMFGQK----LNVCV 72 usage_00083.pdb 57 LMILNGSQFQGKV----IRSGT 74 usage_00177.pdb 55 MNHLNGQKMYGKI----IRVTL 72 usage_00178.pdb 55 MNHLNGQKMYGKI----IRVTL 72 usage_00179.pdb 55 MNHLNGQKMYGKI----IRVTL 72 hLN g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################