################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:47 2021 # Report_file: c_0653_90.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00396.pdb # 2: usage_00744.pdb # 3: usage_00745.pdb # 4: usage_00938.pdb # 5: usage_01186.pdb # 6: usage_01650.pdb # 7: usage_01651.pdb # # Length: 64 # Identity: 5/ 64 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 64 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 64 ( 39.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00396.pdb 1 -GVEV-FRFN--NNVLARTNR----GLASRVLAGHIDTVPIAD-------NLPSRVEDGI 45 usage_00744.pdb 1 -GFAAEEHFGNTKNIWLRRG-TKAPV-V--CFAGHTDVVPTGPVEKWDSPPFEPAERDGR 55 usage_00745.pdb 1 -GFAAEEHFGNTKNIWLRRG-TKAPV-V--CFAGHTDVVPTGPVEKWDSPPFEPAERDGR 55 usage_00938.pdb 1 E-IE-SMVFEDTTNFWARRG-TQSPL-F--VFAGHTDVVPAGPLSQWHTPPFEPTVIDGF 54 usage_01186.pdb 1 ---QT-GRKG--NNVWCLSP-FDKPT-I--LLNSHIDTVKPV-----KD-PFTPREENGK 44 usage_01650.pdb 1 E-IE-SMVFEDTTNFWARRG-TQSPL-F--VFAGHTDVVPAGPLSQWHTPPFEPTVIDGF 54 usage_01651.pdb 1 E-IE-SMVFEDTTNFWARRG-TQSPL-F--VFAGHTDVVPAGPLSQWHTPPFEPTVIDGF 54 f N w r agH D Vp pf p dG usage_00396.pdb 46 YG-- 47 usage_00744.pdb 56 LYGR 59 usage_00745.pdb 56 LYGR 59 usage_00938.pdb 55 LHGR 58 usage_01186.pdb 45 LYG- 47 usage_01650.pdb 55 LHGR 58 usage_01651.pdb 55 LHGR 58 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################