################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:13 2021 # Report_file: c_0157_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00083.pdb # 4: usage_00232.pdb # 5: usage_00341.pdb # 6: usage_00342.pdb # 7: usage_00343.pdb # 8: usage_00344.pdb # 9: usage_00345.pdb # 10: usage_00496.pdb # 11: usage_00533.pdb # # Length: 172 # Identity: 89/172 ( 51.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/172 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/172 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 EPRLPLMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWYW 60 usage_00047.pdb 1 EPRLPLMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWYW 60 usage_00083.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAW-------Y-W 47 usage_00232.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00341.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00342.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00343.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00344.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00345.pdb 1 -----LLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 55 usage_00496.pdb 1 -----LMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWYW 55 usage_00533.pdb 1 --HLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYW 58 L YHL AVS G P FW GWLG QQYL YN LR EA PCGAW w W usage_00046.pdb 61 EKETTDLKSKEQLFLEAIRTLENQINGTFTLQGLLGCELAPDNSSLPTAVFALNGEEFMR 120 usage_00047.pdb 61 EKETTDLKSKEQLFLEAIRTLENQINGTFTLQGLLGCELAPDNSSLPTAVFALNGEEFMR 120 usage_00083.pdb 48 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 105 usage_00232.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00341.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00342.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00343.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00344.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00345.pdb 56 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 113 usage_00496.pdb 56 EKETTDLKSKEQLFLEAIRTLENQINGTFTLQGLLGCELAPDNSSLPTAVFALNGEEFMR 115 usage_00533.pdb 59 EKETTDLRIKEKLFLEAFKAL--GGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMN 116 EKETTDL KE LFLEA L G TLQGLLGCEL PDN S PTA FALNGEEFM usage_00046.pdb 121 FNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLGHLERG- 171 usage_00047.pdb 121 FNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLGHLERG- 171 usage_00083.pdb 106 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLL--------------- 142 usage_00232.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLF-------------- 151 usage_00341.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRLREHLERGR 165 usage_00342.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRLREHLERGR 165 usage_00343.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLF-------------- 151 usage_00344.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRLREHLERGR 165 usage_00345.pdb 114 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLF-------------- 151 usage_00496.pdb 116 FNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLT-------------- 153 usage_00533.pdb 117 FDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLF-------------- 154 F G W G WPE W Q AA KE FLL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################