################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:32 2021 # Report_file: c_0282_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00011.pdb # 2: usage_00022.pdb # 3: usage_00036.pdb # 4: usage_00039.pdb # 5: usage_00048.pdb # 6: usage_00073.pdb # 7: usage_00075.pdb # 8: usage_00087.pdb # 9: usage_00088.pdb # 10: usage_00089.pdb # 11: usage_00090.pdb # 12: usage_00091.pdb # 13: usage_00092.pdb # 14: usage_00095.pdb # # Length: 84 # Identity: 29/ 84 ( 34.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 84 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 84 ( 2.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -QLQQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPTFGTANYA 59 usage_00022.pdb 1 QRLVQSGPQVRKPGSSVRISCETSGYTFNAYILHWFRQAPGRSFEWMGWIKPKFGAVNYA 60 usage_00036.pdb 1 VQLVQSGAEVKKPGATVKISCKVYGYIFTDYNIYWVRQAPGKGLEWMGLIDPDNGETFYA 60 usage_00039.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYSFSSFGISWVRQAPGQGLEWLGWISAFNGYTKYA 60 usage_00048.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00073.pdb 1 AHLVQSGTAMKKPGASVRVSCQTSGYTFTAHILFWFRQAPGRGLEWVGWIKPQYGAVNFG 60 usage_00075.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00087.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00088.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00089.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00090.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00091.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00092.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFS 60 usage_00095.pdb 1 VQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFS 60 LvQSG vkKPG sV SC sGy F W RQAPG EW G I p G usage_00011.pdb 60 QKFQGRVTITADESTSTAYMELS- 82 usage_00022.pdb 61 HSFQGRITLTRDIYRETAFLDLTG 84 usage_00036.pdb 61 EKFQGRATMTADTSSDRAYMELS- 83 usage_00039.pdb 61 QKFQDRVTMTTDTSTSTAYMELR- 83 usage_00048.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00073.pdb 61 GGFRDRVTLTRDVYREIAYMDIRG 84 usage_00075.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00087.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00088.pdb 61 AKFQDRVTFTADTSANTAYMELR- 83 usage_00089.pdb 61 AKFQDRVTFTADTSANTAYMELR- 83 usage_00090.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00091.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00092.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 usage_00095.pdb 61 AKFQDRVTFTADTSANTAYMELRS 84 Fq R T T D Aym l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################