################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:51 2021 # Report_file: c_1166_135.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00196.pdb # 2: usage_00245.pdb # 3: usage_00369.pdb # 4: usage_00394.pdb # 5: usage_00761.pdb # 6: usage_00874.pdb # 7: usage_00881.pdb # 8: usage_00882.pdb # 9: usage_01171.pdb # # Length: 33 # Identity: 6/ 33 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 33 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 33 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00196.pdb 1 GRIYIDDGLISLVV------QKIGPE--GLVTQ 25 usage_00245.pdb 1 SKIYVDDGLISLQVDFLVTE------------- 20 usage_00369.pdb 1 GRIYIDDGLISLVV------QKIGPE--GLVTQ 25 usage_00394.pdb 1 SKVYVDDGLISLQV------KQKGDF--LV-TE 24 usage_00761.pdb 1 NYIYIDDGILILQV------QSHEDEQTLE-CT 26 usage_00874.pdb 1 SKIYVDDGLISLQV------KQKGAD--FLVTE 25 usage_00881.pdb 1 SKVYVDDGLISLQV------KQKF---LVT-E- 22 usage_00882.pdb 1 SKVYVDDGLISLQV------KQKGDF--LV-TE 24 usage_01171.pdb 1 GRIYIDDGLISLVV------QKIGPE--GLVTQ 25 Y DDGlisL V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################