################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:37 2021 # Report_file: c_1462_83.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00030.pdb # 2: usage_00130.pdb # 3: usage_00131.pdb # 4: usage_00132.pdb # 5: usage_00183.pdb # 6: usage_00360.pdb # 7: usage_00407.pdb # 8: usage_00419.pdb # 9: usage_00420.pdb # 10: usage_00462.pdb # 11: usage_00472.pdb # 12: usage_00654.pdb # 13: usage_00860.pdb # 14: usage_01222.pdb # 15: usage_01242.pdb # 16: usage_01306.pdb # 17: usage_01403.pdb # 18: usage_02117.pdb # 19: usage_02394.pdb # # Length: 27 # Identity: 7/ 27 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 27 ( 37.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 27 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTN 25 usage_00130.pdb 1 ---AIKCVVVGDGAVGKTCLLISYTTN 24 usage_00131.pdb 1 ---AIKCVVVGDGAVGKTCLLISYTTN 24 usage_00132.pdb 1 ---AIKCVVVGDGAVGKTCLLISYTTN 24 usage_00183.pdb 1 --QAIKCVVVGDGAVGKTCLLISYTTN 25 usage_00360.pdb 1 -MQAIKCVVVGDGAVGKTCLLISYTTN 26 usage_00407.pdb 1 HMQTIKCVVVGDGAVGKTCLLISYTTN 27 usage_00419.pdb 1 --QAIKCVVVGDGAVGKTCLLISYTTN 25 usage_00420.pdb 1 --QAIKCVVVGDGAVGKTCLLISYTTN 25 usage_00462.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTN 25 usage_00472.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTN 26 usage_00654.pdb 1 -MQAIKCVVVGDGAVGKTCLLISYTTN 26 usage_00860.pdb 1 -MQAIKCVVVGDGAVGKTCLLISYTTN 26 usage_01222.pdb 1 -MQTIKCVVVGDGAVGKTCLLISYTTN 26 usage_01242.pdb 1 -DYLFKVVLIGDSGVGKSNLLSRFTRN 26 usage_01306.pdb 1 --RFIKCVTVGDGAVGKTCMLISYT-- 23 usage_01403.pdb 1 ---LIKLLALGDSGVGKTTFLYRYTDN 24 usage_02117.pdb 1 --KALKIVVVGDGAVGKTCLLLAFSKG 25 usage_02394.pdb 1 --QTIKCVVVGDGAVGKTCLLISYTTN 25 K v GD VGKt L t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################