################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:18 2021 # Report_file: c_1154_16.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00293.pdb # 2: usage_00294.pdb # 3: usage_00295.pdb # 4: usage_00296.pdb # 5: usage_00297.pdb # 6: usage_01081.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 51 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 51 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00293.pdb 1 ----LVNVSHFV------------NPDDLAPGKRVCLNQ--QTLTVVDVLP 33 usage_00294.pdb 1 ----LVNVSHFV------------NPDDLAPGKRVCLNQ--QTLTVVDVLP 33 usage_00295.pdb 1 ----LVNVSHFV------------NPDDLAPGKRVCLNQ--QTLTVVDVLP 33 usage_00296.pdb 1 PSF-LVNVSHFV------------NPDDLAPGKRVCLNQ--QTLTVVDVLP 36 usage_00297.pdb 1 ----VVGVGCFVNSCKACKPCKEHQE-QFCTKVVFT--------------- 31 usage_01081.pdb 1 ---LVIETY--L------------DLARLSPSQQVTLKDQDGNPWNVC--- 31 v v v l p v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################