################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:41 2021 # Report_file: c_0337_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00045.pdb # 2: usage_00055.pdb # 3: usage_00079.pdb # 4: usage_00100.pdb # 5: usage_00112.pdb # 6: usage_00113.pdb # 7: usage_00116.pdb # 8: usage_00163.pdb # 9: usage_00174.pdb # 10: usage_00199.pdb # # Length: 111 # Identity: 3/111 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/111 ( 6.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/111 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 ---APTFTQPLQSVVVLE--GSTATFEAHISGFPVPEVSWFRDGQVISTS-TLPGVQISF 54 usage_00055.pdb 1 ---KPYFTKTILDMDVVE--GSAARFDCKVEGYPDPEVMWFKDDNPVKES--R-HFQIDY 52 usage_00079.pdb 1 ---AISMPQ--KSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE---NEKYILKG 52 usage_00100.pdb 1 ---APTFTQPLQSVVVLE--GSTATFEAHISGFPVPEVSWFRDGQVISTS-TLPGVQISF 54 usage_00112.pdb 1 ---APTFTQPLQSVVVLE--GSTATFEAHISGFPVPEVSWFRDGQVISTS-TLPGVQISF 54 usage_00113.pdb 1 TTQAPTFTQPLQSVVVLE--GSTATFEAHISGFPVPEVSWFRDGQVISTS-TLPGVQISF 57 usage_00116.pdb 1 ---APKLQG-PVAVYTWE--GNQVNITCEVFAYPSATISWFRDGQLLPSS-NYSNIKIYN 53 usage_00163.pdb 1 ---APRITLRMRSHRVPC--GQNTRFILNVQSKPTAEVKWYHNGVELQES--S-KIHYTN 52 usage_00174.pdb 1 ---MVKIIKKPKDVTALE--NATVAFEVSVSH-DTVPVKWFHKSVEIKP---SDKHRLVS 51 usage_00199.pdb 1 ---PVLITRPLEDQLVMV--GQRVEFECEVSE-EGAQVKWLKDGVELTR-EETFKYRFKK 53 g f W usage_00045.pdb 55 S-DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKA--------- 95 usage_00055.pdb 53 DEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETM-------- 95 usage_00079.pdb 53 ---SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV--------- 91 usage_00100.pdb 55 S-DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTA--------------- 89 usage_00112.pdb 55 S-DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQ 104 usage_00113.pdb 58 S-DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKA--------- 98 usage_00116.pdb 54 T-PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQ----------- 92 usage_00163.pdb 53 T-SGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG--------- 93 usage_00174.pdb 52 E-RKVHKLMLQNISPSDAGEYTAVVG----QLECKAKLFVET--------- 88 usage_00199.pdb 54 D-GQRHHLIINEAMLEDAGHYALCTS----GGQALAELIVQE--------- 90 L g Y a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################