################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:38 2021 # Report_file: c_0715_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00109.pdb # 2: usage_00254.pdb # 3: usage_00360.pdb # 4: usage_00361.pdb # 5: usage_00653.pdb # # Length: 63 # Identity: 54/ 63 ( 85.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 63 ( 85.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 63 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 ---PKPTLWAEPGSVITQGSPVTLRCQ----TQEYRLYREKKTAPWITRIPQELVKKGQF 53 usage_00254.pdb 1 GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQF 60 usage_00360.pdb 1 ----KPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTALWITRIPQELVKKGQF 56 usage_00361.pdb 1 GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTALWITRIPQELVKKGQF 60 usage_00653.pdb 1 ----KPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQF 56 KPTLWAEPGSVITQGSPVTLRCQ TQEYRLYREKKTA WITRIPQELVKKGQF usage_00109.pdb 54 PIP 56 usage_00254.pdb 61 PIP 63 usage_00360.pdb 57 PIP 59 usage_00361.pdb 61 PIP 63 usage_00653.pdb 57 PIP 59 PIP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################