################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:21 2021 # Report_file: c_0143_7.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00086.pdb # 2: usage_00157.pdb # 3: usage_00194.pdb # 4: usage_00205.pdb # 5: usage_00220.pdb # 6: usage_00223.pdb # 7: usage_00224.pdb # 8: usage_00225.pdb # 9: usage_00226.pdb # 10: usage_00227.pdb # # Length: 113 # Identity: 57/113 ( 50.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/113 ( 60.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/113 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 --VLTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQHHPGKAPKLIISEVNNRPSGV 58 usage_00157.pdb 1 -SVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSKRPSGV 59 usage_00194.pdb 1 ---LTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 57 usage_00205.pdb 1 --VLTQPPSVSAAPGQKVTISCSGSSSNIGD-NYVSWYQHLPGTAPKLLIYENTRRPSGI 57 usage_00220.pdb 1 -SVLTQPPSASGTPGQRVTISCSGSLSNIGL-NYVSWYQQLPGTAPKLLISRNNQRPSGV 58 usage_00223.pdb 1 --ALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 58 usage_00224.pdb 1 --ALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 58 usage_00225.pdb 1 ---LTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 57 usage_00226.pdb 1 PSALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 60 usage_00227.pdb 1 --ALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 58 LTQPPS Sg GQ VTISC G sS G nyVsWYQ G APK I RPSGv usage_00086.pdb 59 PDRFSGSKSGNTASLTVSGLQAEDEAEYYCSSYTDIH--NFVFGGGTKLTV-- 107 usage_00157.pdb 60 PDRFSGSKSGTSASLAITGLQSEDEADYYCASWTDGLS-LVVFGGGTKLTV-- 109 usage_00194.pdb 58 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTV-- 106 usage_00205.pdb 58 PDRFSGSKSGTSATLAITGLQTGDEADYYCGTWDVRPNRGAVFGTGTKVTV-- 108 usage_00220.pdb 59 PDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSP-PGEAFGGGTKLTV-- 108 usage_00223.pdb 59 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTV-- 107 usage_00224.pdb 59 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTV-- 107 usage_00225.pdb 58 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTVLG 108 usage_00226.pdb 61 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTV-- 109 usage_00227.pdb 59 PDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSD--NFVFGTGTKVTV-- 107 PDRFSGSKSG AsL GLq eDEAdYYC vFG GTK TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################