################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:01 2021 # Report_file: c_0971_32.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00126.pdb # 2: usage_00248.pdb # 3: usage_00250.pdb # 4: usage_00292.pdb # 5: usage_00456.pdb # 6: usage_00457.pdb # 7: usage_00514.pdb # 8: usage_00515.pdb # 9: usage_00516.pdb # 10: usage_00517.pdb # 11: usage_00518.pdb # 12: usage_00519.pdb # 13: usage_00520.pdb # 14: usage_00521.pdb # 15: usage_00522.pdb # 16: usage_00523.pdb # # Length: 57 # Identity: 21/ 57 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 57 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 57 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00126.pdb 1 -NVGTGMVGAPACGDVMQLQIKVD-DNGIIEDAKFKTYGCGSAIASSSLITEW---- 51 usage_00248.pdb 1 ---GTGLVGAPACGDVMKLQIQVD-EKGKIVDARFKTFGCGSAIASSSLATEWVK-- 51 usage_00250.pdb 1 --VGSGMVGAPACGAVMKLQIKVN-DEGIIEDARFKTYGCGSAIASSSLVTEWVK-- 52 usage_00292.pdb 1 --NGVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMV--- 52 usage_00456.pdb 1 --DGVGTVGNPVCGDLMTIYIKVK--DNRIEDIKFQTFGCAAAIATSSMATEMAK-- 51 usage_00457.pdb 1 --DGVGTVGNPVCGDLMTIYIKVK--DNRIEDIKFQTFGCAAAIATSSMATEMAK-- 51 usage_00514.pdb 1 --VGTGLVGAPACGDVMKLQIQVD-EKGKIVDARFKTFGCGSAIASSSLATEWVK-- 52 usage_00515.pdb 1 -NVGTGLVGAPACGDVMKLQIQVD-EKGKIVDARFKTFGCGSAIASSSLATEWVKGK 55 usage_00516.pdb 1 --VGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQGM 55 usage_00517.pdb 1 --VGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQGM 55 usage_00518.pdb 1 PNVGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQ-- 55 usage_00519.pdb 1 ---GTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQGM 54 usage_00520.pdb 1 --VGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQ-- 53 usage_00521.pdb 1 --VGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQ-- 53 usage_00522.pdb 1 --VGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQ-- 53 usage_00523.pdb 1 ----TGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQ-- 51 G vG P CG M I V I D F T GC AIA SS TE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################