################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:31 2021 # Report_file: c_0835_118.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00053.pdb # 2: usage_00680.pdb # 3: usage_00902.pdb # 4: usage_01359.pdb # 5: usage_01360.pdb # # Length: 91 # Identity: 0/ 91 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 91 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 91 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 ------GTHIAKTLAQLNPE----S-SLFIIASKT--FT-TQETITNAE----TAKEWFL 42 usage_00680.pdb 1 ------LDVMKELITLAK--CHEFL-IFEDRKF----ADIGNTVKKQYEGGIFKIASWAD 47 usage_00902.pdb 1 SQGQRQLLAITRAFLAN--------PKILILDE-ATSNVDTKTEKSIQA----AMWKLME 47 usage_01359.pdb 1 ------GTHIAKTLAQLNPE----S-SLFIIASKT--FT-TQETITNAE----TAKEWFL 42 usage_01360.pdb 1 -------THIAKTLAQLNPE----S-SLFIIASKT--FT-TQETITNAE----TAKEWFL 41 i i t e w usage_00053.pdb 43 QAAKDPSAVAKHFVALST----NTTKVKEFG 69 usage_00680.pdb 48 -----------LVNAHVVPGSGVVKGLQEVG 67 usage_00902.pdb 48 -GK--------TSIIIAH----RLNTIKN-A 64 usage_01359.pdb 43 QAAKDPSAVAKHFVALST----NTTKVKEFG 69 usage_01360.pdb 42 QAAKDPSAVAKHFVALST----NTTKVKEFG 68 a ke g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################