################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:12 2021 # Report_file: c_0339_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00006.pdb # 2: usage_00008.pdb # 3: usage_00014.pdb # 4: usage_00025.pdb # 5: usage_00041.pdb # 6: usage_00047.pdb # 7: usage_00084.pdb # 8: usage_00086.pdb # 9: usage_00091.pdb # 10: usage_00105.pdb # 11: usage_00140.pdb # # Length: 94 # Identity: 10/ 94 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 94 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 94 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 GPLSVPEGAIVSLNCTYSNSA--F-------QYFMWYRQYSRKGPELLMYTY---S-SGN 47 usage_00008.pdb 1 -SLSASVGDRVTITCKASQN---ID------KYLNWYQQKPGKAPKLLIYN----T-NNL 45 usage_00014.pdb 1 SSLSASVGDRVTITCQASQD---IS------NYLNWYQHKPGKAPKLLIYT----A-SNL 46 usage_00025.pdb 1 AIMSAAPGDKVTMTCSASSS---V-------SYIHWYQQKSGTSPKRWIYD----T-SKL 45 usage_00041.pdb 1 SSLSASLGDRVTITCQASRG---IG------KDLNWYQQKAGKAPKLLVSD----A-STL 46 usage_00047.pdb 1 KSMSMSVGERVTLSCKASEN---VG------TYVSWYQQKPEQSPKLLIYG----A-SNR 46 usage_00084.pdb 1 HVKTVKRGENVTMECSMS-KVTNK-------NNLAWYRQSFGKVPQYFVRYYSSNSGYKF 52 usage_00086.pdb 1 DSLAVSLGERATINCKSSQS---VLYSSNNKNYLAWYQQKPGQPPKLLIYW----A-STR 52 usage_00091.pdb 1 DSLSASVGDRVTMSCKSSQS---LLNSGDQKNYLTWYQQKPGQPPKLLIYW----A-STG 52 usage_00105.pdb 1 STLSASVGDRVTITCSASSR---V-------GYMHWYQQKPGKAPKLLIYD----T-SKL 45 usage_00140.pdb 1 ATLSVTPGDRVSLSCRASQS---IG------DYLHWYQQKSHESPRLLINY----A-SQS 46 G v C S WY q P usage_00006.pdb 48 KE---DGRFTAQVDKSSKYISLFIRDSQPSDSAT 78 usage_00008.pdb 46 QT-GVPSRFSGSGSG--TDFTFTISSLQPEDIAT 76 usage_00014.pdb 47 ET-GVPSRFSGGGSG--THFSFTITSLQPEDAAT 77 usage_00025.pdb 46 TS-GVPVRFSGSGSG--TSYSLTINTMEAEDAAT 76 usage_00041.pdb 47 EG-GVPSRFSGSGFH--QNFSLTISSLQAEDVAT 77 usage_00047.pdb 47 YT-GVPDRFTGSGSA--TDFTLKISSVQAEDLAD 77 usage_00084.pdb 53 AEGFKDSRFSMTVND--QKFDLNIIGAREDDGGE 84 usage_00086.pdb 53 ES-GVPDRFSGSGSG--TDFTLTISSLQAEDVAV 83 usage_00091.pdb 53 ES-GVPDRFSGSGSG--TDFTFTISSLQPEDIAT 83 usage_00105.pdb 46 AS-GVPSRFSGSGSG--TEFTLTISSLQPDDFAT 76 usage_00140.pdb 47 IS-GIPSRFSGSGSG--SDFTLIINSVEPEDVGV 77 RF I D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################