################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:02 2021 # Report_file: c_1377_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00665.pdb # 4: usage_00666.pdb # 5: usage_01059.pdb # 6: usage_01069.pdb # # Length: 78 # Identity: 45/ 78 ( 57.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 78 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 78 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 YQDAETLYKEILTRAHEKEFGSV-GDNKPIWMHAEEREES--------KDKRRDACKVDS 51 usage_00022.pdb 1 YQDAETLYKEILTRAHEKEFG-S-GDNKPIWMHAEEREES--------KDKRRDACKVDS 50 usage_00665.pdb 1 YQDAETLYKEILTRAHEKEFGSVNGENKPIWMHAEEREES--------------ACKVDS 46 usage_00666.pdb 1 YQDAETLYKEILTRAHEKEFGSVNGENKPIWMHAEEREESK-------------ACKVDS 47 usage_01059.pdb 1 -QDAETLYKEILTRAHEKEFGSVNGENKPIWMHAEEREES--------------ACKVDS 45 usage_01069.pdb 1 -KQAETLYKEILTRAHEREFG------KPIWMHAEEREEC-TSFGEYG-----------S 41 qdAETLYKEILTRAHEkEFG KPIWMHAEEREEs S usage_00021.pdb 52 PTVNTTLRSLGALYRRQG 69 usage_00022.pdb 51 PTVNTTLRSLGALYRRQG 68 usage_00665.pdb 47 PTVNTTLRSLGALYRRQG 64 usage_00666.pdb 48 PTVNTTLRSLGALYRRQG 65 usage_01059.pdb 46 PTVNTTLRSLGALYRRQG 63 usage_01069.pdb 42 PTVTTTLKNLGALYRRQG 59 PTVnTTLrsLGALYRRQG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################