################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:27 2021 # Report_file: c_0657_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00024.pdb # 2: usage_00312.pdb # 3: usage_00925.pdb # 4: usage_00926.pdb # 5: usage_00933.pdb # 6: usage_01008.pdb # # Length: 71 # Identity: 9/ 71 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 71 ( 40.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 71 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 SCYLVGRELGHTEI-VVADIGIPE---E-TSSKQHCVIQFRNVR--------GILKCYVM 47 usage_00312.pdb 1 SCYLFGRE------RRIADIPTDH---P-SCSKQHAVIQYRE--EKEKPDGGKQVKPYI- 47 usage_00925.pdb 1 SCYLVGRELGHTEI-VVADIGIPE---E-TSSKQHCVIQFRNVR--------GILKCYVM 47 usage_00926.pdb 1 SCYLVGRELG-TEI-VVADIGIPE---E-TSSKQHCVIQFRNVR--------GILKCYVM 46 usage_00933.pdb 1 -EVTVGRG-------FGVTYQLVSKICPLMISRNHCVLKQNP-----------EGQWTIM 41 usage_01008.pdb 1 SCYLVGRELGHTEI-VVADIGIPE---E-TSSKQHCVIQFRNVR--------GILKCYVM 47 cylvGRe adi SkqHcViq r k y usage_00024.pdb 48 DLDSSNGTCLN 58 usage_00312.pdb 48 DLGSTNKTYIN 58 usage_00925.pdb 48 DLDSSNGTCLN 58 usage_00926.pdb 47 DLDSSNGTCLN 57 usage_00933.pdb 42 DNKSLNGVWLN 52 usage_01008.pdb 48 DLDSSNGTCLN 58 Dl S Ngt lN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################