################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:59 2021 # Report_file: c_0835_26.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00039.pdb # 2: usage_00066.pdb # 3: usage_00076.pdb # 4: usage_00182.pdb # 5: usage_00639.pdb # # Length: 79 # Identity: 17/ 79 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 79 ( 64.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 79 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 GPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PEAMICVI 59 usage_00066.pdb 1 ---DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVV 57 usage_00076.pdb 1 ---DPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVV 57 usage_00182.pdb 1 ---DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVV 57 usage_00639.pdb 1 ---DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVV 57 dp afKdaD allvga PRk GMeR DLl N Ift qg A a va kvlVv usage_00039.pdb 60 ANPVNSTIPITAEVFKKHG 78 usage_00066.pdb 58 GNPANTNAYIAMKSA---- 72 usage_00076.pdb 58 GNPANTNALIAYKNA---- 72 usage_00182.pdb 58 GNPANTNALIAYKNA---- 72 usage_00639.pdb 58 GNPANTNALIAYKNA---- 72 gNPaNtna Ia k a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################