################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:44:37 2021 # Report_file: c_0246_5.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00009.pdb # 7: usage_00010.pdb # 8: usage_00011.pdb # 9: usage_00012.pdb # 10: usage_00013.pdb # 11: usage_00014.pdb # 12: usage_00015.pdb # 13: usage_00016.pdb # 14: usage_00017.pdb # 15: usage_00018.pdb # 16: usage_00019.pdb # 17: usage_00020.pdb # 18: usage_00021.pdb # 19: usage_00068.pdb # 20: usage_00069.pdb # 21: usage_00070.pdb # 22: usage_00073.pdb # # Length: 136 # Identity: 53/136 ( 39.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/136 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/136 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00002.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00003.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00004.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00005.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00009.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00010.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00011.pdb 1 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 59 usage_00012.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00013.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00014.pdb 1 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 59 usage_00015.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00016.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00017.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00018.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00019.pdb 1 -RRGALIVLEGVDGAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00020.pdb 1 --RGALIVFEGLDKSGKTTQCMNIMESIP---ANTIKYLNFPQRSTVTGKMIDDYLTRKK 55 usage_00021.pdb 1 ------IVFEGLDKSGKTTQCMNIMESIP---ANTIKYLNFPQRSTVTGKMIDDYLTRKK 51 usage_00068.pdb 1 -----LIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 54 usage_00069.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00070.pdb 1 -RRGALIVLEGVDRAGKSTQSRKLVEALCAAGH-RAELLRFPERSTEIGKLLSSYLQKKS 58 usage_00073.pdb 1 ARRGALIVLEGVDRAGKSTQSRKLVEALCA--H-RAELLRFPERSTEIGKLLS------- 50 IV EG D GK TQ E L FP RST GK usage_00001.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00002.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00003.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00004.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00005.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00009.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00010.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00011.pdb 60 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 119 usage_00012.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00013.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00014.pdb 60 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 119 usage_00015.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00016.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00017.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAYTGAKENFSLDWCKQPD 118 usage_00018.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAYTGAKENFSLDWCKQPD 118 usage_00019.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00020.pdb 56 TYNDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYES 115 usage_00021.pdb 52 TYNDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYES 111 usage_00068.pdb 55 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 114 usage_00069.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00070.pdb 59 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 118 usage_00073.pdb 51 -VEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 109 DH V LLF ANRWE I E L QG TL VDRYAFSGVA AK usage_00001.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00002.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00003.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00004.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00005.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00009.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00010.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00011.pdb 120 VGLPKPDLVLFLQLQ- 134 usage_00012.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00013.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00014.pdb 120 VGLPKPDLVLFLQLQ- 134 usage_00015.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00016.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00017.pdb 119 VGLPKPDLVLFL---- 130 usage_00018.pdb 119 VGLPKPDLVLFL---- 130 usage_00019.pdb 119 VGLPKPDLVLFL---- 130 usage_00020.pdb 116 GLPKP-DLVIFL---- 126 usage_00021.pdb 112 GLPKP-DLVIFLESGS 126 usage_00068.pdb 115 VGLPKPDLVLFLQLQ- 129 usage_00069.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00070.pdb 119 VGLPKPDLVLFLQLQ- 133 usage_00073.pdb 110 VGLPKPDLVLFLQLQ- 124 DLV FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################