################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:31 2021 # Report_file: c_1395_61.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00271.pdb # 4: usage_00287.pdb # 5: usage_00731.pdb # 6: usage_00732.pdb # 7: usage_01243.pdb # 8: usage_01517.pdb # 9: usage_01518.pdb # 10: usage_01519.pdb # 11: usage_01520.pdb # 12: usage_01521.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 34 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 34 ( 61.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 -PQKIEIFKSLDNWAEENILV----HL------- 22 usage_00040.pdb 1 PPQKIEIFKSLDNWAEENILV----H-------- 22 usage_00271.pdb 1 ---LNDVYYKMFKSLEAKADDLTYFNDE------ 25 usage_00287.pdb 1 -------PARDLDKFIEDHLL------------- 14 usage_00731.pdb 1 -PQKIEIFKSLDNWAEENILV----H-------- 21 usage_00732.pdb 1 -PQKIEIFKSLDNWAEENILV----H-------- 21 usage_01243.pdb 1 --------EQVREILHRIYYP----EE-GITISY 21 usage_01517.pdb 1 -PQKIEIFKSLDNWAEENILV----HL-K----- 23 usage_01518.pdb 1 --QKIEIFKSLDNWAEENILV----HL-K----- 22 usage_01519.pdb 1 -PQKIEIFKSLDNWAEENILV----HL-K----- 23 usage_01520.pdb 1 --QKIEIFKSLDNWAEENILV----HL-K----- 22 usage_01521.pdb 1 -PQKIEIFKSLDNWAEENILV----HL-K----- 23 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################