################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:30 2021 # Report_file: c_0443_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00070.pdb # 2: usage_00153.pdb # 3: usage_00168.pdb # 4: usage_00169.pdb # 5: usage_00170.pdb # 6: usage_00171.pdb # 7: usage_00301.pdb # 8: usage_00318.pdb # 9: usage_00319.pdb # 10: usage_00320.pdb # 11: usage_00488.pdb # 12: usage_00489.pdb # # Length: 103 # Identity: 8/103 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/103 ( 13.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/103 ( 35.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 ---KTIILSGAPNVGKSSFMNIVSR-ANVDVQ-SY------NLYVGHFDHKLNKYQIIDT 49 usage_00153.pdb 1 ---THALLIGNPNCGKTTLFNALTN-ANQRVG-NWPGVTV-EKKTGEFLLGEHLIEITDL 54 usage_00168.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 usage_00169.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 usage_00170.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 usage_00171.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 usage_00301.pdb 1 ---KTVALVGNPNVGKTTIFNALTG-LRQHVG-NWPGVTV-EKKEGIMEYREKEFLVVDL 54 usage_00318.pdb 1 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPI------PVDDEV--FIDGRKYVFVD- 51 usage_00319.pdb 1 -HMVKVALAGCPNVGKTSLFNALTG-TKQYVA-NWPGVTV-EKKEGVFTYKGYTINLIDL 56 usage_00320.pdb 1 -HMVKVALAGCPNVGKTSLFNALTG-TKQYVA-NWPGVTV-EKKEGVFTYKGYTINLIDL 56 usage_00488.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 usage_00489.pdb 1 -KSYEIALIGNPNVGKSTIFNALTG-ENVYIG-NWPGVTV-EKKEGEFEYNGEKFKVVDL 56 l G PNvGK fNa g D usage_00070.pdb 50 PGLLD-RAFENRNTIE----MTTITALAH--INGVILFIIDIS 85 usage_00153.pdb 55 PG--VYSLVAN--SQD----EQIAAQSVIDLEYDCIINVID-- 87 usage_00168.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 usage_00169.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 usage_00170.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 usage_00171.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 usage_00301.pdb 55 PG--IYSLTAH--SID----ELIARNFILDGNADVIVDIVD-- 87 usage_00318.pdb 52 --------TAGL----EKYSNYRVVDSIE--KADVVVIVLD-- 78 usage_00319.pdb 57 PG--TYSLGYS--SID----EKIARDYLLKGDADLVILVAD-- 89 usage_00320.pdb 57 PG--TYSLGYS--SID----EKIARDYLLKGDADLVILVAD-- 89 usage_00488.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 usage_00489.pdb 57 PG--VYSLTAN--SID----EIIARDYIINEKPDLVVNIVD-- 89 d D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################