################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:13 2021 # Report_file: c_1113_16.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00083.pdb # 5: usage_00100.pdb # 6: usage_00342.pdb # 7: usage_00425.pdb # 8: usage_00426.pdb # 9: usage_00856.pdb # 10: usage_00857.pdb # 11: usage_00946.pdb # # Length: 90 # Identity: 72/ 90 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 90 ( 81.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 90 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00024.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00025.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00083.pdb 1 ---LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 57 usage_00100.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00342.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00425.pdb 1 ---LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 57 usage_00426.pdb 1 LEKLCRFIMSVKKNYRRV-YHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 59 usage_00856.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00857.pdb 1 LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHD 60 usage_00946.pdb 1 ---LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHN 57 LCRFIMSVKKNYRRV YHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHd usage_00023.pdb 61 LDHRGFS-----NSTMEQHHFSQTVSILQL 85 usage_00024.pdb 61 LDHRGFS-----TSTMEQHHFSQTVSILQL 85 usage_00025.pdb 61 LDHRGFSNSYLSTSTMEQHHFSQTVSILQL 90 usage_00083.pdb 58 LDHRGFSNSY--TSTMEQHHFSQTVSILQL 85 usage_00100.pdb 61 LDHRGFSNSY--TSTMEQHHFSQTVSILQL 88 usage_00342.pdb 61 LDH------------MEQHHFSQTVSILQ- 77 usage_00425.pdb 58 LDHRGFSNSYLQTSTMEQHHFSQTVSILQL 87 usage_00426.pdb 60 LDHRGFSNSYL-TSTMEQHHFSQTVSILQL 88 usage_00856.pdb 61 LDHRGFSNSY--TSTMEQHHFSQTVSILQL 88 usage_00857.pdb 61 LDHRGFSNSY--TSTMEQHHFSQTVSILQ- 87 usage_00946.pdb 58 LDHRGFS-----TSTMEQHHFSQTVSILQL 82 LDH MEQHHFSQTVSILQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################