################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:32 2021 # Report_file: c_1462_158.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00220.pdb # 2: usage_00389.pdb # 3: usage_00440.pdb # 4: usage_01219.pdb # 5: usage_01220.pdb # 6: usage_01223.pdb # 7: usage_01443.pdb # 8: usage_01493.pdb # 9: usage_01579.pdb # 10: usage_01807.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 38 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 38 ( 68.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 IL-VVT-GTG-T-G---V--GKTVVCAALASAARQAG- 28 usage_00389.pdb 1 ------LGSN-G-S---TSGSVCASTS-----LLNAG- 21 usage_00440.pdb 1 VV-LLS--GG-P-G---T--GKTIFSQQFLWNGLKMG- 27 usage_01219.pdb 1 VV-VVT--GV-P-G---V--GSTTSSQLAMDNLRKEG- 27 usage_01220.pdb 1 VV-VVT--GV-P-G---V--GSTTSSQLAMDNLRKEG- 27 usage_01223.pdb 1 LV-VVT--GV-P-G---V--GGTTITQKAMEKLSEEG- 27 usage_01443.pdb 1 DI-VIE--GKRGLDTFAS--TNLDFILRSKG------- 26 usage_01493.pdb 1 TCFTFM--AG-K-P---E--YDKTISTSIVLNALNALG 29 usage_01579.pdb 1 IF-MLV--GV-N-G---T--GKTTSLAKMANYYAELG- 27 usage_01807.pdb 1 VV-LMA--GL-Q-G---A--GKTTSVGKLGKFLREKHK 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################