################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:59 2021 # Report_file: c_0629_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00006.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00023.pdb # 7: usage_00170.pdb # # Length: 82 # Identity: 5/ 82 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 82 ( 24.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 82 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 TYSQYLV-LTLWEENPQTLNSIGRHLDLSSNTLTP-LKRLEQSGWVKRERQ-----QLII 53 usage_00016.pdb 1 TYPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VII 53 usage_00017.pdb 1 -YPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VII 52 usage_00018.pdb 1 TYPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VII 53 usage_00019.pdb 1 TYPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------QVI 53 usage_00023.pdb 1 TYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKR-EQVDLIKRERSEVDQREVFI 59 usage_00170.pdb 1 SLTRYSILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRK-------EVLV 53 y qylv Lw L ld t tp LKr g R i usage_00006.pdb 54 TLTDNGQQQQEA-VFEAISSCL 74 usage_00016.pdb 54 ALTETGRALRSK-AG------- 67 usage_00017.pdb 53 ALTETGRALRSK-AG------- 66 usage_00018.pdb 54 ALTETGRALRSK-AG------- 67 usage_00019.pdb 54 IALTETGRALRSKAG------- 68 usage_00023.pdb 60 HLTDKSETIR------------ 69 usage_00170.pdb 54 WPTEQAREAL------------ 63 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################