################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:30 2021 # Report_file: c_1297_346.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00979.pdb # 2: usage_02899.pdb # 3: usage_03231.pdb # 4: usage_03232.pdb # 5: usage_03233.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 50 ( 32.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 50 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00979.pdb 1 TEELSQKAIAYAKVLADELELVGT---LAVEMFATADGEIYI--NELAPR 45 usage_02899.pdb 1 ----YAEILELQKSVAQAFRITDGPGHLE-IYRTHSGELI-VGEIA---- 40 usage_03231.pdb 1 -EKYSKIAREIATSVVEALEGVGI---FGIEFLTKQGEIL-V-------- 37 usage_03232.pdb 1 EEKYSKIAREIATSVVEALEGVGI---FGIEFLTKQGEIL-VNEIAPR-- 44 usage_03233.pdb 1 -EKYSKIAREIATSVVEALEGVGI---FGIEFLTKQGEIL-VNEIAPR-- 43 s a e a sv ale vg e t ge v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################