################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:31 2021 # Report_file: c_1101_33.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00346.pdb # 2: usage_00347.pdb # 3: usage_00348.pdb # 4: usage_00349.pdb # 5: usage_00351.pdb # 6: usage_00352.pdb # 7: usage_00353.pdb # 8: usage_00354.pdb # 9: usage_00386.pdb # 10: usage_00408.pdb # 11: usage_00409.pdb # 12: usage_00537.pdb # 13: usage_00538.pdb # 14: usage_00579.pdb # 15: usage_00580.pdb # 16: usage_00683.pdb # 17: usage_00684.pdb # 18: usage_00685.pdb # 19: usage_00686.pdb # 20: usage_00776.pdb # # Length: 73 # Identity: 26/ 73 ( 35.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 73 ( 37.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 73 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00346.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00347.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00348.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00349.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00351.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00352.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00353.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00354.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00386.pdb 1 -IASWRHNVTAK-L--------LNNDLLVGARLLERAATGVPR-ELREALLEAAAALRA- 48 usage_00408.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00409.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00537.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00538.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00579.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00580.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00683.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00684.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00685.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00686.pdb 1 PVTTWRHHARIKIPAGLD----TDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDE 56 usage_00776.pdb 1 PIASWRHNVTA-------KLSELNNDLLVGARLLERAATGVPR-ELREALLEAAAALRAP 52 WRH L GARL ERAA VP E R LL A ALR usage_00346.pdb 57 SRPAASRLAAALT 69 usage_00347.pdb 57 SRPAASRLAAALT 69 usage_00348.pdb 57 SRPAASRLAAALT 69 usage_00349.pdb 57 SRPAASRLAAALT 69 usage_00351.pdb 57 SRPAASRLAAALT 69 usage_00352.pdb 57 SRPAASRLAAALT 69 usage_00353.pdb 57 SRPAASRLAAALT 69 usage_00354.pdb 57 SRPAASRLAAALT 69 usage_00386.pdb 49 PGDPFTRAGAALS 61 usage_00408.pdb 57 SRPAASRLAAALT 69 usage_00409.pdb 57 SRPAASRLAAALT 69 usage_00537.pdb 57 SRPAASRLAAALT 69 usage_00538.pdb 57 SRPAASRLAAALT 69 usage_00579.pdb 57 SRPAASRLAAALT 69 usage_00580.pdb 57 SRPAASRLAAALT 69 usage_00683.pdb 57 SRPAASRLAAALT 69 usage_00684.pdb 57 SRPAASRLAAALT 69 usage_00685.pdb 57 SRPAASRLAAALT 69 usage_00686.pdb 57 SRPAASRLAAALT 69 usage_00776.pdb 53 GDPF-TRAGAALS 64 p R AAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################