################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:05 2021 # Report_file: c_1297_111.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00629.pdb # 2: usage_00630.pdb # 3: usage_00822.pdb # 4: usage_00923.pdb # 5: usage_01609.pdb # 6: usage_01712.pdb # 7: usage_02602.pdb # 8: usage_02603.pdb # 9: usage_02777.pdb # 10: usage_02833.pdb # 11: usage_03015.pdb # 12: usage_03149.pdb # 13: usage_03150.pdb # 14: usage_03325.pdb # # Length: 59 # Identity: 5/ 59 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 59 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 59 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00629.pdb 1 IPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG---I-PPNSTLVFDVELLD------ 49 usage_00630.pdb 1 -PGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG---I-PPNSTLVFDVELLDVK--P- 51 usage_00822.pdb 1 -KGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAG---VIP--PNATLVFEVELLD---- 49 usage_00923.pdb 1 IKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIP--PNATLVFEVELLD---- 50 usage_01609.pdb 1 IKGWDQGVATMTLGEKALFTIPYQLAYGERGYPP---VIP--PKATLVFEVELLA---- 50 usage_01712.pdb 1 -EGLDRAVLNMKKGEVALVTIPPEYAYGSTESK-QDAIVP--PNSTVIYEVELVS---- 51 usage_02602.pdb 1 IKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIP--PNATLVFEVELLD---- 50 usage_02603.pdb 1 IKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIP--PNATLVFEVELLD---- 50 usage_02777.pdb 1 IKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIP--PNATLVFEVELLD---- 50 usage_02833.pdb 1 -KGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIP--PNATLVFEVELLD---- 49 usage_03015.pdb 1 -PGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGG---PIG--PNETLIFKIHLISVKKS 53 usage_03149.pdb 1 IKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPP---KIP--GGATLVFEVELLKIERR 54 usage_03150.pdb 1 IKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPP---KIP--GGATLVFEVELLKIERR 54 usage_03325.pdb 1 IKGWDEGVQGMKVGGVRRLTIPPQLGYGAGGAGG---VIP--PNATLVFEVELLD---- 50 Gw G iP l YG p e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################