################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:21 2021 # Report_file: c_1240_57.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00152.pdb # 2: usage_00717.pdb # 3: usage_00718.pdb # 4: usage_00956.pdb # 5: usage_00957.pdb # 6: usage_01024.pdb # 7: usage_01025.pdb # 8: usage_01162.pdb # 9: usage_01163.pdb # 10: usage_01164.pdb # 11: usage_01165.pdb # 12: usage_01543.pdb # # Length: 42 # Identity: 1/ 42 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 42 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 42 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00152.pdb 1 --LLIFDEIATGFGR-TGALFAA---DHAGV---SPDIMCVG 33 usage_00717.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_00718.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_00956.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_00957.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01024.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01025.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01162.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01163.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01164.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 usage_01165.pdb 1 -KAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 32 usage_01543.pdb 1 LKAGAVAG-------VSHLRNPVLAARLVM-EQSPHVMMIG- 33 agavag shlrnpv rlvm phvmMig #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################