################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:36 2021 # Report_file: c_0205_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_00147.pdb # 6: usage_00216.pdb # 7: usage_00231.pdb # # Length: 124 # Identity: 90/124 ( 72.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/124 ( 72.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/124 ( 1.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 PYVGTILGGLVPGELIVLHGSIPDDADRFQVDLQCGSSIKPRADVAFHFNPRFKWSGCVV 60 usage_00005.pdb 1 PYVGTILGGLVPGELIVLHGSIPDDADRFQVDLQCGSSIKPRADVAFHFNPRFKWSGCVV 60 usage_00124.pdb 1 PFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFKRAGCIV 60 usage_00125.pdb 1 PFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFKRAGCIV 60 usage_00147.pdb 1 PYVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFK--GCIV 58 usage_00216.pdb 1 PFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIV 60 usage_00231.pdb 1 PFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFKRAGCIV 60 P VGTI L PG LIV G P DADRFQVDLQ GSS KPRADVAFHFNPRFK GC V usage_00004.pdb 61 CNTLEREKWGWEEITYEMPFQKGRPFEIVIMILKDKFQVSVNKKHLLLYNHRISLERIDT 120 usage_00005.pdb 61 CNTLEREKWGWEEITYEMPFQKGRPFEIVIMILKDKFQVSVNKKHLLLYNHRISLERIDT 120 usage_00124.pdb 61 CNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDT 120 usage_00125.pdb 61 CNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDT 120 usage_00147.pdb 59 CNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDT 118 usage_00216.pdb 61 CNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDT 120 usage_00231.pdb 61 CNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDT 120 CNTL EKWG EEITY PF FEIVIM LKDKFQV VN KH LLY HRI E IDT usage_00004.pdb 121 LGIY 124 usage_00005.pdb 121 LGIY 124 usage_00124.pdb 121 LGIY 124 usage_00125.pdb 121 LGIY 124 usage_00147.pdb 119 LGIY 122 usage_00216.pdb 121 LGIY 124 usage_00231.pdb 121 LGIY 124 LGIY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################