################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:33 2021 # Report_file: c_0842_53.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00022.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00399.pdb # 7: usage_00400.pdb # 8: usage_00666.pdb # 9: usage_00673.pdb # 10: usage_00674.pdb # 11: usage_00676.pdb # 12: usage_00704.pdb # 13: usage_00709.pdb # 14: usage_00710.pdb # 15: usage_00876.pdb # 16: usage_00923.pdb # # Length: 60 # Identity: 12/ 60 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 60 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 60 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00043.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00044.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00061.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00062.pdb 1 -DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 59 usage_00399.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00400.pdb 1 -AKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRKAGVATYASPSTRRLAEAEG 59 usage_00666.pdb 1 -DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 59 usage_00673.pdb 1 -DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 59 usage_00674.pdb 1 -DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 59 usage_00676.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQNKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00704.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00709.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00710.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 usage_00876.pdb 1 -DAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEK- 58 usage_00923.pdb 1 TDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEG 60 d qTa lnwi i lpV av tH H d GG d L aG atYAn LA e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################