################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:15 2021 # Report_file: c_1383_168.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00258.pdb # 4: usage_00404.pdb # 5: usage_00736.pdb # 6: usage_00842.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 64 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 64 ( 78.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -TVKQEVSRRC--QALASFMET--LMDEV-SRA-------D-------L-----K----L 31 usage_00020.pdb 1 ETVKQEVSRRC--QALASFMET--LMDEV-SRA-------D-------L-----K----L 32 usage_00258.pdb 1 -------------QAAWKEARA--SLQNL-LSA--------SQARLRDD-----KELRQR 31 usage_00404.pdb 1 ----------L--KGLINGVLR--QFQRQ-QEELLAEFNAS-------D-----A----- 28 usage_00736.pdb 1 ----WGWLAWVDPAYEFIKGFGKGAIKEG-NKD-------K-------W-----K----N 32 usage_00842.pdb 1 AASRIELVTFG----VEP-LSA--IEARLN-QP-------D-------HADHLA------ 32 usage_00019.pdb ---- usage_00020.pdb ---- usage_00258.pdb 32 A--- 32 usage_00404.pdb 29 -RYL 31 usage_00736.pdb ---- usage_00842.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################