################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:22:53 2021 # Report_file: c_0293_13.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00083.pdb # 2: usage_00264.pdb # 3: usage_00289.pdb # 4: usage_00319.pdb # 5: usage_00320.pdb # 6: usage_00335.pdb # 7: usage_00391.pdb # 8: usage_00392.pdb # 9: usage_00393.pdb # 10: usage_00457.pdb # # Length: 133 # Identity: 46/133 ( 34.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/133 ( 34.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/133 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 ----KGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 54 usage_00264.pdb 1 GTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 58 usage_00289.pdb 1 ----KGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 54 usage_00319.pdb 1 -TVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 59 usage_00320.pdb 1 -----AEWHGSDVAVKIL------------FLREVAIMKRLRHPNIVLFMGAVTQPPNLS 43 usage_00335.pdb 1 -TVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 57 usage_00391.pdb 1 -TVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 57 usage_00392.pdb 1 GTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 58 usage_00393.pdb 1 ----KGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 54 usage_00457.pdb 1 -TVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLA 57 W DVAVK L F EV RH NI LFMG T P L usage_00083.pdb 55 IVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK--SIIHRDLKSNN 109 usage_00264.pdb 59 IVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNN 113 usage_00289.pdb 55 IVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK--SIIHRDLKSNN 109 usage_00319.pdb 60 IVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 118 usage_00320.pdb 44 IVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 102 usage_00335.pdb 58 IVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK--SIIHRDLKSNN 112 usage_00391.pdb 58 IVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNN 112 usage_00392.pdb 59 IVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNN 113 usage_00393.pdb 55 IVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNN 109 usage_00457.pdb 58 IVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK--SIIHRDLKSNN 112 IVT SLY LH A A GM YLH I HR LKS N usage_00083.pdb 110 IFLHEDLTVKIG- 121 usage_00264.pdb 114 IFLHEDNTVKIG- 125 usage_00289.pdb 110 IFLHEDLTVKI-- 120 usage_00319.pdb 119 LLVDKKYTVKV-- 129 usage_00320.pdb 103 LLVDKKYTVKVCD 115 usage_00335.pdb 113 IFLHEDLTVKI-- 123 usage_00391.pdb 113 IFLHEDNTVKIGD 125 usage_00392.pdb 114 IFLHEDNTVKIGD 126 usage_00393.pdb 110 IFLHEDNTVKIGD 122 usage_00457.pdb 113 IFLHEDLTVKI-- 123 TVK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################