################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:38:36 2021 # Report_file: c_0742_34.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00031.pdb # 5: usage_00036.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # 10: usage_00055.pdb # 11: usage_00056.pdb # 12: usage_00084.pdb # 13: usage_00274.pdb # 14: usage_00275.pdb # 15: usage_00282.pdb # 16: usage_00283.pdb # 17: usage_00284.pdb # 18: usage_00285.pdb # 19: usage_00289.pdb # 20: usage_00360.pdb # 21: usage_00395.pdb # # Length: 58 # Identity: 9/ 58 ( 15.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 58 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 58 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----------LD--KDG--KDVLFRVKCQSGTYIRKLCEDIGEALGTSAHMQELRR-- 42 usage_00002.pdb 1 -TRKVYYIEILE--IDG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMAELRR-- 51 usage_00003.pdb 1 --RKVYYIEILE--IDG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMAELRRTR 52 usage_00031.pdb 1 RTRKVYYIEVLE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 52 usage_00036.pdb 1 ------IEFDNK----R--NLGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRR-- 44 usage_00038.pdb 1 RTRKVYYIEVLE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 52 usage_00039.pdb 1 ------ELLFIR--HEG--NELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRR-- 46 usage_00040.pdb 1 ------IEFDNK----R--NLGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRR-- 44 usage_00041.pdb 1 RTRKVYYIEVLE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 52 usage_00055.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00056.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00084.pdb 1 ------RFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRR-- 50 usage_00274.pdb 1 -----FKIWDVN--IEG--RDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVR-- 47 usage_00275.pdb 1 -----FKIWDVN--IEG--RDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVR-- 47 usage_00282.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00283.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00284.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00285.pdb 1 RTRKVYYIEVLE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 52 usage_00289.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00360.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 usage_00395.pdb 1 ----------LE--IEG--RDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRR-- 42 GTY R l G LG g L R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################