################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:45:41 2021 # Report_file: c_0197_5.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00041.pdb # 7: usage_00042.pdb # 8: usage_00043.pdb # 9: usage_00044.pdb # 10: usage_00045.pdb # 11: usage_00046.pdb # 12: usage_00047.pdb # 13: usage_00068.pdb # 14: usage_00069.pdb # 15: usage_00121.pdb # 16: usage_00122.pdb # 17: usage_00123.pdb # # Length: 192 # Identity: 72/192 ( 37.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/192 ( 37.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/192 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00002.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00003.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00039.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00040.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00041.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00042.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00043.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00044.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00045.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00046.pdb 1 --REHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 58 usage_00047.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00068.pdb 1 --YEHIDRLYDCARVIDLKIPLSKEEFAEAILETLRRNNLRDAYIRPIVTRGAGDLGLDP 58 usage_00069.pdb 1 --YEHIDRLYDCARVIDLKIPLSKEEFAEAILETLRRNNLRDAYIRPIVTRGAGDLGLDP 58 usage_00121.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00122.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 usage_00123.pdb 1 RHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNP 60 EH RL D A S E EA R NNL AYIRP G G P usage_00001.pdb 61 PAG--YSTDVIIAAFPW------------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 106 usage_00002.pdb 59 PAG--YSTDVIIAAFPW------------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 104 usage_00003.pdb 61 PAG--YSTDVIIAAFPW------------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 106 usage_00039.pdb 61 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 116 usage_00040.pdb 59 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 114 usage_00041.pdb 61 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 116 usage_00042.pdb 59 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 114 usage_00043.pdb 59 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 114 usage_00044.pdb 59 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 114 usage_00045.pdb 61 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 116 usage_00046.pdb 59 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 114 usage_00047.pdb 61 PAG--YSTDVIIAAFPWGAY-LGAEAL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 116 usage_00068.pdb 59 R--KCPSPNVIIITKPWGKLYG--DLY-EKGLKAITVAIRRNAIDSLPPNIKSLN-YLNN 112 usage_00069.pdb 59 R--KCPSPNVIIITKPW---------LYEKGLKAITVAIRRNAIDSLPPNIKSLN-YLNN 106 usage_00121.pdb 61 PAG--YSTDVIIAAFPW--------AL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 109 usage_00122.pdb 61 PAG--YSTDVIIAAFPW--------AL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 109 usage_00123.pdb 61 PAG--YSTDVIIAAFPW--------AL-EQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 109 S VII PW G A R A P K YL usage_00001.pdb 107 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 166 usage_00002.pdb 105 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 164 usage_00003.pdb 107 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 166 usage_00039.pdb 117 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 176 usage_00040.pdb 115 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 174 usage_00041.pdb 117 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 176 usage_00042.pdb 115 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 174 usage_00043.pdb 115 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 174 usage_00044.pdb 115 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 174 usage_00045.pdb 117 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 176 usage_00046.pdb 115 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 174 usage_00047.pdb 117 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 176 usage_00068.pdb 113 ILAKIEANAKGGDEAIFLDHNGYISEGSGDNIFIVKNGTITTPPTL-NNLKGITRQVVIE 171 usage_00069.pdb 107 ILAKIEANAKGGDEAIFLDHNGYISEGSGDNIFIVKNGTITTPPTL-NNLKGITRQVVIE 165 usage_00121.pdb 110 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 169 usage_00122.pdb 110 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 169 usage_00123.pdb 110 LLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIK 169 L EA G E I LD NGYISEG G N F VK G TPP L GITR I usage_00001.pdb 167 LAKELGIEVREQ 178 usage_00002.pdb 165 LAKELGIEVREQ 176 usage_00003.pdb 167 LAKELGIEVREQ 178 usage_00039.pdb 177 LAKELGIEVREQ 188 usage_00040.pdb 175 LAKELGIEVREQ 186 usage_00041.pdb 177 LAKELGIEVREQ 188 usage_00042.pdb 175 LAKELGIEVREQ 186 usage_00043.pdb 175 LAKELGIEVREQ 186 usage_00044.pdb 175 LAKELGIEVREQ 186 usage_00045.pdb 177 LAKELGIEVREQ 188 usage_00046.pdb 175 LAKELGIEVREQ 186 usage_00047.pdb 177 LAKELGIEVREQ 188 usage_00068.pdb 172 LINELEIPFRE- 182 usage_00069.pdb 166 LINELEIPFREA 177 usage_00121.pdb 170 LAKELGIEVREQ 181 usage_00122.pdb 170 LAKELGIEVREQ 181 usage_00123.pdb 170 LAKELGIEVREQ 181 L EL I RE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################