################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:11 2021 # Report_file: c_1058_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00145.pdb # 2: usage_00221.pdb # 3: usage_00228.pdb # 4: usage_00230.pdb # 5: usage_00231.pdb # 6: usage_00233.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 61 ( 16.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 61 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 ----VKKILSKASSKK------------ATIELTETDSGLKIIIRDEKS-GAKSTIYIK- 42 usage_00221.pdb 1 EREHLLKPLQQVSG--PLGGRP-TLPILGNLLLQVADGTLSLTGT-D--LEMEMVARVA- 53 usage_00228.pdb 1 SKNDLENALRYLQA--FLDKKDAS-SIASHIHLEVIKEKLFLKAS-D--SDIGLKSYIFT 54 usage_00230.pdb 1 SKNDLENALRYLQA--FLDKKDAS-SIASHIHLEVIKEKLFLKAS-D--SDIGLKSYIFT 54 usage_00231.pdb 1 SKNDLENALRYLQA--FLDKKDAS-SIASHIHLEVIKEKLFLKAS-D--SDIGLKSYIFT 54 usage_00233.pdb 1 ----LENALRYLQA--FLD--DAS-SIASHIHLEVIKEKLFLKAS-D--SDIGLKSYIFT 48 l L i L v L l d yi usage_00145.pdb - usage_00221.pdb - usage_00228.pdb 55 Q 55 usage_00230.pdb 55 Q 55 usage_00231.pdb 55 Q 55 usage_00233.pdb 49 Q 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################