################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:02 2021 # Report_file: c_1084_137.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00486.pdb # 2: usage_00509.pdb # 3: usage_01352.pdb # 4: usage_01353.pdb # 5: usage_01808.pdb # 6: usage_01809.pdb # 7: usage_01880.pdb # # Length: 69 # Identity: 4/ 69 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 69 ( 69.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 69 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00486.pdb 1 -NGVIKNRIEKLARDVMKEMG---GHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIP 56 usage_00509.pdb 1 PHGLIMDRTERLARDVMKEM----GHHIVALCVLKGGYKFFADLLDYIKALNRNSDS-IP 55 usage_01352.pdb 1 PHGLIMDRTERLARDVMKEMG---GHHIVALCVLKGGYKFFADLLDYIKALNRNSDR-SP 56 usage_01353.pdb 1 -HGLIMDRTERLARDVMKEMG---GHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIP 56 usage_01808.pdb 1 PHGLIMDRTERLARDVMKEMG---GHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIP 57 usage_01809.pdb 1 PHGLIMDRTERLARDVMKEMG---GHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIP 57 usage_01880.pdb 1 --------NYNGGRMAFDHLYEKGCRKILHIKGPEV-FEATELRYKGFLDGARAKDLEID 51 e laRdvmkem ghhIvalcvlkg ykffadlldyikalnRnsD ip usage_00486.pdb 57 MTVDFIR-- 63 usage_00509.pdb 56 MTVDFIRLK 64 usage_01352.pdb 57 MTVDFIRLK 65 usage_01353.pdb 57 MTVDFIRLK 65 usage_01808.pdb 58 MTVDFIRL- 65 usage_01809.pdb 58 MTVDF---- 62 usage_01880.pdb 52 FIEFQ---- 56 mtvdf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################