################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:05 2021 # Report_file: c_1445_510.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02430.pdb # 2: usage_03896.pdb # 3: usage_04148.pdb # 4: usage_07129.pdb # 5: usage_08005.pdb # 6: usage_08006.pdb # 7: usage_08014.pdb # 8: usage_08015.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 41 ( 70.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02430.pdb 1 RHD--WENVVVWLDNAA-----SA----NIVALSA-S---- 25 usage_03896.pdb 1 AKE--YYAGLILDRA------------KKRVVLMLSK---- 23 usage_04148.pdb 1 ---------SCVNHLH-CTTDKCPW--KEQNYTTC------ 23 usage_07129.pdb 1 ---YLQYVETISIP-------------QNVTTTLSYQLTKG 25 usage_08005.pdb 1 --M--RHHYVDSISHPL-----YKCS--SKMVLLARC---- 26 usage_08006.pdb 1 --M--RHHYVDSISHPL-----YKCSS-MVLLARC------ 25 usage_08014.pdb 1 --M--RHHYVDSISHPL-----YKCS--SKMVLLARC---- 26 usage_08015.pdb 1 --M--RHHYVDSISHPL-----YKCSS-MVLLARC------ 25 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################