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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:48:01 2021
# Report_file: c_0301_3.html
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#====================================
# Aligned_structures: 8
#   1: usage_00055.pdb
#   2: usage_00056.pdb
#   3: usage_00057.pdb
#   4: usage_00058.pdb
#   5: usage_00059.pdb
#   6: usage_00060.pdb
#   7: usage_00061.pdb
#   8: usage_00062.pdb
#
# Length:        131
# Identity:      123/131 ( 93.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    123/131 ( 93.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            7/131 (  5.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00055.pdb         1  KRKNIALI-PAAPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   59
usage_00056.pdb         1  --KNIALIPAA--KQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   56
usage_00057.pdb         1  KRKNIALIPAAGPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   60
usage_00058.pdb         1  -RKNIALI-PAAPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   58
usage_00059.pdb         1  -RKNIALIPAAGPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   59
usage_00060.pdb         1  KRKNIALIPAA---QYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   57
usage_00061.pdb         1  KRKNIALIPAA--KQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   58
usage_00062.pdb         1  KRKNIALIPA--PKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP   58
                             KNIALI      QYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFP

usage_00055.pdb        60  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  119
usage_00056.pdb        57  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  116
usage_00057.pdb        61  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  120
usage_00058.pdb        59  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  118
usage_00059.pdb        60  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  119
usage_00060.pdb        58  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  117
usage_00061.pdb        59  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  118
usage_00062.pdb        59  QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA  118
                           QVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA

usage_00055.pdb       120  AEGGILAVPVA  130
usage_00056.pdb       117  AEGGILAVPVA  127
usage_00057.pdb       121  AEGGILAVPVA  131
usage_00058.pdb       119  AEGGILAVPVA  129
usage_00059.pdb       120  AEGGILAVPVA  130
usage_00060.pdb       118  AEGGILAVPVA  128
usage_00061.pdb       119  AEGGILAVPVA  129
usage_00062.pdb       119  AEGGILAVPVA  129
                           AEGGILAVPVA


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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