################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:23 2021 # Report_file: c_1142_304.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00114.pdb # 2: usage_01457.pdb # 3: usage_01467.pdb # 4: usage_01607.pdb # 5: usage_02139.pdb # # Length: 34 # Identity: 5/ 34 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 34 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 34 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 AEVLFRENNPTVLECIIE-GN--DQGVKYSW-KK 30 usage_01457.pdb 1 SAVSVREGQGVVLMCS-PPPH--SPEIIYSWVF- 30 usage_01467.pdb 1 STVSVREGQGVVLLCG-PPPH--FGELSYAWTF- 30 usage_01607.pdb 1 QNITARIGEPLVLKCK-G--APKKPPQRLEWKL- 30 usage_02139.pdb 1 -NITARIGEPLVLKCK-G--APKKPPQRLEWKL- 29 R g VL C W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################