################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:28 2021 # Report_file: c_1452_251.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00091.pdb # 2: usage_01167.pdb # 3: usage_01325.pdb # 4: usage_01326.pdb # 5: usage_01609.pdb # 6: usage_01778.pdb # 7: usage_01858.pdb # 8: usage_02526.pdb # 9: usage_03485.pdb # 10: usage_04316.pdb # 11: usage_04413.pdb # 12: usage_04699.pdb # 13: usage_04749.pdb # # Length: 43 # Identity: 2/ 43 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 43 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 43 ( 69.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00091.pdb 1 -VYFCASGGGG--------T------L----YFGAGTRLSVL- 23 usage_01167.pdb 1 -MYYCARD--A--------M------D----YWGQGTLVTVS- 21 usage_01325.pdb 1 -VYYCARGLTE--------SLEL-TA-DWFDYWGQGTLVTV-- 30 usage_01326.pdb 1 -VYYCARGLTE--------SLEL-TA-DWFDYWGQGTLVTVS- 31 usage_01609.pdb 1 ---MYYCARGD--------Y-YG-S-RG-AYWG-QGTLVTV-- 25 usage_01778.pdb 1 -MYYCARRERY--------D-EN-GFA----YWGQGTLVTVS- 27 usage_01858.pdb 1 -VYYCTRKDYG--------TEVF---V----YWGQGTLVTVS- 26 usage_02526.pdb 1 AVYYCILPLAGGTSY----G-K----L----TFGQGTILTVHP 30 usage_03485.pdb 1 -VYYCARWGGD--------G-FYAM-D----YWGQGTLVTVS- 27 usage_04316.pdb 1 -VYYCAKLP----FT-------F-------DDWGQGTLVTV-- 22 usage_04413.pdb 1 -VYYCARHSW-G-------------------GWGQGTTVTV-- 20 usage_04699.pdb 1 -IYYCASGF-G--LSLSRYT-Y----A----YWGQGTQVT--- 27 usage_04749.pdb 1 -VYFCASGVGG--------T------L----YFGAGTRLSVL- 23 c GT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################