################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:45 2021 # Report_file: c_0908_20.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00003.pdb # 2: usage_00212.pdb # 3: usage_00213.pdb # 4: usage_00214.pdb # 5: usage_00252.pdb # 6: usage_00253.pdb # 7: usage_00339.pdb # 8: usage_00340.pdb # 9: usage_00341.pdb # 10: usage_00342.pdb # 11: usage_00343.pdb # 12: usage_00344.pdb # 13: usage_00345.pdb # 14: usage_00354.pdb # 15: usage_00355.pdb # 16: usage_00473.pdb # 17: usage_00492.pdb # 18: usage_00534.pdb # # Length: 73 # Identity: 24/ 73 ( 32.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 73 ( 32.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 73 ( 38.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00212.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAD---------------- 40 usage_00213.pdb 1 ----GNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRGGHELSKVTGNA 56 usage_00214.pdb 1 ----GNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRGGHELSKVTGNA 56 usage_00252.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00253.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00339.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00340.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00341.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00342.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00343.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00344.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00345.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00354.pdb 1 ------VTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDLGKGGNEESTKTGNA 54 usage_00355.pdb 1 ------VTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDLGKGGNEESTKTGNA 54 usage_00473.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNA 56 usage_00492.pdb 1 ----GNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKAD---------------- 40 usage_00534.pdb 1 VGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNA 60 V A DG A D ISL G H I GR V HE D usage_00003.pdb 57 GSRLACGV----- 64 usage_00212.pdb 41 -SRLACGV----- 47 usage_00213.pdb 57 GGRLACGVVGLAA 69 usage_00214.pdb 57 GGRLACGVVGLAA 69 usage_00252.pdb 57 GSRLACGV----- 64 usage_00253.pdb 57 GSRLACGV----- 64 usage_00339.pdb 57 GSRLACGV----- 64 usage_00340.pdb 57 GSRLACGVTGIAQ 69 usage_00341.pdb 57 GSRLACGV----- 64 usage_00342.pdb 57 GSRLACGVTGIAQ 69 usage_00343.pdb 57 GSRLACGVTGIAQ 69 usage_00344.pdb 57 GSRLACGVTGIAQ 69 usage_00345.pdb 57 GSRLACGVTGIAQ 69 usage_00354.pdb 55 GSRLACGV----- 62 usage_00355.pdb 55 GSRLACGV----- 62 usage_00473.pdb 57 GSRLACGV----- 64 usage_00492.pdb 41 -SRLACGV----- 47 usage_00534.pdb 61 GSRLACGVIGIAQ 73 RLACGV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################