################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:59 2021 # Report_file: c_0703_51.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00316.pdb # 2: usage_00561.pdb # 3: usage_00567.pdb # 4: usage_00581.pdb # 5: usage_00685.pdb # 6: usage_00686.pdb # 7: usage_00981.pdb # # Length: 66 # Identity: 5/ 66 ( 7.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 66 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 66 ( 47.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 TELRGTWSLEGNKLIGKFKRTD-NGNELNTVRE---IIGDELVQTYVYEGVEAKRIFK-- 54 usage_00561.pdb 1 QKF--KAAIDGNGFKGTWT-ENG-GGDVSGRFYGPA--G--EE------VAGKYSYRP-T 45 usage_00567.pdb 1 -----TWSLEGNKLIGKFKRTD-NGNELNTVRE---IIGDELVQTYVYEGVEAKRIFKK- 50 usage_00581.pdb 1 -----TWSLEGNKLIGKFKRTD-NGNELNTVRE---IIGDELVQTYVYEGVEAKRIFKK- 50 usage_00685.pdb 1 -----TWSLEGNKLIGKFKRTD-NGNELNTVRE---IIGDELVQTYVYEGVEAKRIFK-- 49 usage_00686.pdb 1 -----TWSLEGNKLIGKFKRTD-NGNELNTVRE---IIGDELVQTYVYEGVEAKRIFK-- 49 usage_00981.pdb 1 -----TWTMEGNKLVGKFKRVD-NGKELIAVRE---ISGNELIQTYTYEGVEAKRI---- 47 tw eGNkl Gkfk d G el vre G l gveakri usage_00316.pdb ------ usage_00561.pdb 46 DAEKGG 51 usage_00567.pdb ------ usage_00581.pdb ------ usage_00685.pdb ------ usage_00686.pdb ------ usage_00981.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################