################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:26 2021 # Report_file: c_0219_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00046.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # # Length: 140 # Identity: 87/140 ( 62.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/140 ( 62.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/140 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 MLTT----------------------VDEFTVEHPWKDDKRKQHIYDRVFDMRASQDDIF 38 usage_00046.pdb 1 AIRS----------------------VDEFTVEHLWK--KAKQHMYDRVFDGNATQDDVF 36 usage_00047.pdb 1 ----IRVYCRLRPLCEKEIIAKERNAVDEFTVEHLWK----KQHMYDRVFDGNATQDDVF 52 usage_00048.pdb 1 AIRS----------------------VDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVF 38 usage_00049.pdb 1 AIRS----------------------VDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVF 38 usage_00052.pdb 1 MLTT----------------------VDEFTVEHPWKDDKRKQHIYDRVFDMRASQDDIF 38 usage_00053.pdb 1 MLTT----------------------VDEFTVEHPWKDDKRKQHIYDRVFDMRASQDDIF 38 VDEFTVEH WK KQH YDRVFD A QDD F usage_00013.pdb 39 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRF 98 usage_00046.pdb 37 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKF 96 usage_00047.pdb 53 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKF 112 usage_00048.pdb 39 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKF 98 usage_00049.pdb 39 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKF 98 usage_00052.pdb 39 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRF 98 usage_00053.pdb 39 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRF 98 EDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYG SNPGLTPRA ELF I K DS F usage_00013.pdb 99 SFSLKAYMVELYQDTLVDLL 118 usage_00046.pdb 97 SFSLKAYMVELYQDTLVDLL 116 usage_00047.pdb 113 SFSLKAYMVELYQDTLVDLL 132 usage_00048.pdb 99 SFSLKAYMVELYQDTLVDLL 118 usage_00049.pdb 99 SFSLKAYMVELYQDTLVDLL 118 usage_00052.pdb 99 SFSLKAYMVELYQDTLVDLL 118 usage_00053.pdb 99 SFSLKAYMVELY-------- 110 SFSLKAYMVELY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################