################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:52 2021 # Report_file: c_0312_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00014.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00081.pdb # 6: usage_00106.pdb # 7: usage_00143.pdb # # Length: 118 # Identity: 47/118 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/118 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/118 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -LPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDR 59 usage_00078.pdb 1 -IVAHVERWAKVRGDKLAYRFLDFST---GVPRDLTWAQFSARNRAVAARLQQVTQPGDR 56 usage_00079.pdb 1 -IVAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQPGDR 59 usage_00080.pdb 1 -IVAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQPGDR 59 usage_00081.pdb 1 -IVAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQPGDR 59 usage_00106.pdb 1 --VAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQPGDR 58 usage_00143.pdb 1 SLPAALRACARLQPHDPAFTF-DYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDR 59 A A A F D GV LTW Q R VA L GDR usage_00014.pdb 60 VVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGGVT-DE--RSDSVLSDSSPVAILTT 114 usage_00078.pdb 57 VAILCPQNLDYLVAFFGALYAGRIAVPLFDPS---GHVG--RLHAVLDNCHPSAILTT 109 usage_00079.pdb 60 VAILCPQNLDYLVAFFGALYAGRIAVPLFDPS---EHVG--RLHAVLDNCHPSAILTT 112 usage_00080.pdb 60 VAILCPQNLDYLVAFFGALYAGRIAVPLFDPS---EHVG--RLHAVLDNCHPSAILTT 112 usage_00081.pdb 60 VAILCPQNLDYLVAFFGALYAGRIAVPLFDPS---EHVG--RLHAVLDNCHPSAILTT 112 usage_00106.pdb 59 VAILCPQNLDYLVAFFGALYAGRIAVPLFDPS---EPGHVGRLHAVLDNCHPSAILTT 113 usage_00143.pdb 60 VVISAPQGLEYVVAFLGALQAGRIAVPLSVPQ------R---SDSVLSDSSPVAILTT 108 V I PQ L Y VAF GAL AGRIAVPL P VL P AILTT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################