################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:41 2021 # Report_file: c_0200_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00071.pdb # 5: usage_00137.pdb # 6: usage_00156.pdb # 7: usage_00157.pdb # 8: usage_00158.pdb # 9: usage_00165.pdb # 10: usage_00166.pdb # 11: usage_00176.pdb # 12: usage_00177.pdb # # Length: 224 # Identity: 112/224 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/224 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 71/224 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 TAAQELMIQQLVAAQLQCNKRS--PKVTPWP-----QSRDARQQRFAHFTELAIISVQEI 53 usage_00027.pdb 1 -AAQELMIQQLVAAQLQCNKRSF-SKVTPWPL--------ARQQRFAHFTELAIISVQEI 50 usage_00028.pdb 1 TAAQELMIQQLVAAQLQCNK--RSFKVTPWPL----QSRDARQQRFAHFTELAIISVQEI 54 usage_00071.pdb 1 SPEQLGMIEKLVAAQQ----------VTPWP------SREARQQRFAHFTELAIVSVQEI 44 usage_00137.pdb 1 -----------FSDRL---------RVTPWPIAPDPQSREARQQRFAHFTELAIVSVQEI 40 usage_00156.pdb 1 TAAQ-ELIQQLVAAQLQCNKRSF-SKVTPWPL-----SRDARQQRFAHFTELAIISVQEI 53 usage_00157.pdb 1 TAAQELMIQQLVAAQLQCNKRSF-SKVTPWP-----QSRDARQQRFAHFTELAIISVQEI 54 usage_00158.pdb 1 SPEQLGMIEKLVAAQQ--------LRVTPWP------SREARQQRFAHFTELAIVSVQEI 46 usage_00165.pdb 1 -AAQELMIQQLVAAQLQCNKRSF-PKVTPWP-------RDARQQRFAHFTELAIISVQEI 51 usage_00166.pdb 1 TAAQELMIQQLVAAQLQCNKR----KVTPWP-------RDARQQRFAHFTELAIISVQEI 49 usage_00176.pdb 1 -AAQELMIQQLVAAQLQCNK--RSFKVTPWPL----QSRDARQQRFAHFTELAIISVQEI 53 usage_00177.pdb 1 TAAQELMIQQLVAAQLQCNKRS----VTPW-------SRDARQQRFAHFTELAIISVQEI 49 vaaq VTPW ARQQRFAHFTELAI SVQEI usage_00026.pdb 54 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 113 usage_00027.pdb 51 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 110 usage_00028.pdb 55 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 114 usage_00071.pdb 45 VDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAK 104 usage_00137.pdb 41 VDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAK 100 usage_00156.pdb 54 VDFAKQVPGFLQLGREDQIALLKASTIEI-LLETARRYNHETECITFLKDFTYSKDDFHR 112 usage_00157.pdb 55 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 114 usage_00158.pdb 47 VDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAK 106 usage_00165.pdb 52 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 111 usage_00166.pdb 50 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 109 usage_00176.pdb 54 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR 113 usage_00177.pdb 50 VDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITF---FTYSKDDFHR 106 VDFAKQ PGFLQL REDQIALLK S IE LLET RRYN E ITF F Y DF usage_00026.pdb 114 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 173 usage_00027.pdb 111 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 170 usage_00028.pdb 115 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 174 usage_00071.pdb 105 AGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEA 164 usage_00137.pdb 101 AGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEA 160 usage_00156.pdb 113 AGLQVEFINPIFEFSRA-RRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 171 usage_00157.pdb 115 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 174 usage_00158.pdb 107 AGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEA 166 usage_00165.pdb 112 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 171 usage_00166.pdb 110 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 169 usage_00176.pdb 114 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 173 usage_00177.pdb 107 AGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEA 166 AGLQVEFINPIFEFSRA L L DAE ALLIAI IFSADRPNVQ VE LQ YVEA usage_00026.pdb 174 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD 217 usage_00027.pdb 171 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRL-- 212 usage_00028.pdb 175 LLSYTRIKR----------------------------------- 183 usage_00071.pdb 165 LHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQD 208 usage_00137.pdb 161 LHAYVSINHPHDPLMFPRMLMKLVSLRTLSSVHSEQVFALRLQD 204 usage_00156.pdb 172 LLSYTRIKRPQDQLRFPR-L-KLVSLRTLSSVHSEQVFALRLQD 213 usage_00157.pdb 175 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD 218 usage_00158.pdb 167 LHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQD 210 usage_00165.pdb 172 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ- 214 usage_00166.pdb 170 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ- 212 usage_00176.pdb 174 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD 217 usage_00177.pdb 167 LLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALR--- 207 L Y I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################