################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:35 2021 # Report_file: c_1084_76.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01417.pdb # 2: usage_01640.pdb # 3: usage_01641.pdb # 4: usage_01642.pdb # # Length: 65 # Identity: 13/ 65 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 65 ( 72.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 65 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01417.pdb 1 ----NLQLTAYYVVRWILGAKHYHDLD-IDYIGIWNERPF-DANYIKELRKMLDYQGLQR 54 usage_01640.pdb 1 -NDETIKLYAKEAVVYAE-A-------GADFVAPS----GMMDGQVREIRRALDAHGFEE 47 usage_01641.pdb 1 DNDETIKLYAKEAVVYAE-A-------GADFVAPS----GMMDGQVREIRRALDAHGFEE 48 usage_01642.pdb 1 DNDETIKLYAKEAVVYAE-A-------GADFVAPS----GMMDGQVREIRRALDAHGFEE 48 tikLyAkeaVvyae A aDfvaps g mdgqvrEiRraLDahGfee usage_01417.pdb 55 VRIIA 59 usage_01640.pdb 48 VGIMA 52 usage_01641.pdb 49 VGIMA 53 usage_01642.pdb 49 VGIMA 53 VgImA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################