################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:16 2021 # Report_file: c_0293_20.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00200.pdb # 2: usage_00201.pdb # 3: usage_00208.pdb # 4: usage_00230.pdb # 5: usage_00237.pdb # 6: usage_00249.pdb # 7: usage_00250.pdb # 8: usage_00399.pdb # 9: usage_00413.pdb # 10: usage_00414.pdb # 11: usage_00420.pdb # 12: usage_00436.pdb # # Length: 138 # Identity: 45/138 ( 32.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/138 ( 82.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/138 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00200.pdb 1 GEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTK- 58 usage_00201.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTKA 58 usage_00208.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTKA 58 usage_00230.pdb 1 GEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTK- 58 usage_00237.pdb 1 GEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTK- 58 usage_00249.pdb 1 GEVFKARHRKTGQKVALKKV----EKEGF-PITALREIKILQLLKHENVVNLIEICRT-- 53 usage_00250.pdb 1 GEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRT-- 57 usage_00399.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTK- 57 usage_00413.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTK- 57 usage_00414.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRT-- 56 usage_00420.pdb 1 -EVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRT-- 56 usage_00436.pdb 1 -TVMKCKHKNTGQIVAIKIF---------YNKIAMREIKFLKQFHHENLVNLIEVFRQK- 49 eVfKarHrkTGQkVAlKkv pitAlREIKiLqllkHENvVNLIEicRt usage_00200.pdb 59 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 109 usage_00201.pdb 59 SP-----KGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 112 usage_00208.pdb 59 S-PYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 116 usage_00230.pdb 59 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 109 usage_00237.pdb 59 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 109 usage_00249.pdb 54 ---------SIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 103 usage_00250.pdb 58 ---------SIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 107 usage_00399.pdb 58 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 108 usage_00413.pdb 58 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 108 usage_00414.pdb 57 --------KSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 107 usage_00420.pdb 57 --------GSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILH 107 usage_00436.pdb 50 --------KKIHLVFEFIDHTVLDELQHYCH-GLESKRLRKYLFQILRAIDYLHSNNIIH 100 sIyLVFdFceHdlaglLsnv l kftlseikrvmqmlLnglyYiHrNkIlH usage_00200.pdb 110 RDMKAANVLITRDGVLKL 127 usage_00201.pdb 113 RDMKAANVLITRDGVLKL 130 usage_00208.pdb 117 RDMKAANVLITRDGVLKL 134 usage_00230.pdb 110 RDMKAANVLITRDGVLKL 127 usage_00237.pdb 110 RDMKAANVLITRDGVLKL 127 usage_00249.pdb 104 RDMKAANVLITRDGVLKL 121 usage_00250.pdb 108 RDMKAANVLITRDGVLKL 125 usage_00399.pdb 109 RDMKAANVLITRDGVLKL 126 usage_00413.pdb 109 RDMKAANVLITRDGVLKL 126 usage_00414.pdb 108 RDMKAANVLITRDGVLKL 125 usage_00420.pdb 108 RDMKAANVLITRDGVLKL 125 usage_00436.pdb 101 RDIKPENILVSQSGITKL 118 RDmKaaNvLitrdGvlKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################