################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:21 2021 # Report_file: c_0965_49.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00048.pdb # 2: usage_00060.pdb # 3: usage_00115.pdb # 4: usage_00152.pdb # 5: usage_00155.pdb # 6: usage_00400.pdb # 7: usage_00406.pdb # 8: usage_00468.pdb # 9: usage_00566.pdb # # Length: 49 # Identity: 1/ 49 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 49 ( 10.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 49 ( 49.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 APILRAVPS-AEPQAGSPMTLSCQTRLLF-------SFY-------KD- 33 usage_00060.pdb 1 --LMTQIPVSLPVSLGDQASISCRSSQII-------VHN---------- 30 usage_00115.pdb 1 -VVMTQSPLSLPVTLGQPASISCKSSQSL-------LYSDAKTY-L--- 37 usage_00152.pdb 1 --VLTQSPASLAVSLGQRATISCRASKS-VSSSAYSF-------F---- 35 usage_00155.pdb 1 -WEFVPVQRDIDVRIGETVQIMYRAKNL-AST-PTT---------G--Q 35 usage_00400.pdb 1 --LMTQSPHSLAVTPGEPASISCRSSQSL-------LLGNGRNY-L--- 36 usage_00406.pdb 1 -IVMSQSPSSLAVSVGEKVTLSCKSSQSL-------LYSSNQKN-H--L 38 usage_00468.pdb 1 --VMTQTPLSLPVTPGEPASISCRSSKSL-------LH----------- 29 usage_00566.pdb 1 -IVMSQSPSSLAVSVGEKVTMSCKSSQSL-------LYSNTQKN-Y--L 38 p v G sc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################