################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:54 2021 # Report_file: c_0861_88.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00066.pdb # 2: usage_00477.pdb # 3: usage_00580.pdb # # Length: 70 # Identity: 8/ 70 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 70 ( 67.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 70 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 RVKVFQSSTN---YAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEA--IQLIVRIAA 55 usage_00477.pdb 1 RVKVFQSSAN---YAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEA--IQLIARIAA 55 usage_00580.pdb 1 VCSTRIKTG-FGVPMLTCIQDCSRAD-R----SIVADGG----------IKTSGDIVKAL 44 rvkvfqss yaenfIQsiistv p eatlvvG iqli riAa usage_00066.pdb 56 ANGIGRLVIG 65 usage_00477.pdb 56 ANGIGRLVIG 65 usage_00580.pdb 45 AFGADFVMIG 54 AnGigrlvIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################