################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:45:46 2021 # Report_file: c_0816_1.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00037.pdb # 7: usage_00038.pdb # 8: usage_00039.pdb # 9: usage_00053.pdb # 10: usage_00062.pdb # 11: usage_00063.pdb # 12: usage_00082.pdb # 13: usage_00083.pdb # 14: usage_00084.pdb # 15: usage_00085.pdb # 16: usage_00086.pdb # 17: usage_00087.pdb # 18: usage_00088.pdb # 19: usage_00089.pdb # 20: usage_00090.pdb # 21: usage_00091.pdb # 22: usage_00092.pdb # # Length: 83 # Identity: 19/ 83 ( 22.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 83 ( 53.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 83 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEWDL 59 usage_00002.pdb 1 --WGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEWDL 58 usage_00003.pdb 1 --WGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEWDL 58 usage_00032.pdb 1 TEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 60 usage_00033.pdb 1 TEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 60 usage_00037.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 usage_00038.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 usage_00039.pdb 1 ----PARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00053.pdb 1 ---APASSVVEMVESIVLDRKRVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEINL 57 usage_00062.pdb 1 ----PARGVAHMVEAILHDTGRVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00063.pdb 1 -EWGPARGVAHMVEAILHDTGRVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 usage_00082.pdb 1 --FGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADIKL 57 usage_00083.pdb 1 --WGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEWDL 58 usage_00084.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 usage_00085.pdb 1 ----PARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00086.pdb 1 --WGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 58 usage_00087.pdb 1 ----PARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00088.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 usage_00089.pdb 1 --WGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 58 usage_00090.pdb 1 ----PARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00091.pdb 1 ----PARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 56 usage_00092.pdb 1 -EWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTAFGVPVRLGSNGVEEIVEWDL 59 PA v MVeai Dtg vlP sv LeGe G e ta GVPv LG NGvE i e L usage_00001.pdb 60 DDYEQDLMADAAEKLSDQYDKI- 81 usage_00002.pdb 59 DDYEQDLMADAAEKLSDQYDKI- 80 usage_00003.pdb 59 DDYEQDLMADAAEKLSDQYDKI- 80 usage_00032.pdb 61 DDYEQDLMADAAEKLSDQYDKIS 83 usage_00033.pdb 61 DDYEQDLMADAAEKLSDQYDKIS 83 usage_00037.pdb 60 DDYEQDLMADAAEKLSDQYDKI- 81 usage_00038.pdb 60 DDYEQDLMADAAEKLSDQYDKI- 81 usage_00039.pdb 57 DDYEQDLMADAAEKLSDQYDKI- 78 usage_00053.pdb 58 DQADLDLLQKSAKIVDENC---- 76 usage_00062.pdb 57 DDYEQDLMADAAEKLSDQYDKIS 79 usage_00063.pdb 60 DDYEQDLMADAAEKLSDQYDKIS 82 usage_00082.pdb 58 SDEEIEKLRNSAKILRERLEE-- 78 usage_00083.pdb 59 DDYEQDLMADAAEKLSDQYDKIS 81 usage_00084.pdb 60 DDYEQDLMADAAEKLSDQYDKIS 82 usage_00085.pdb 57 DDYEQDLMADAAEKLSDQYDKI- 78 usage_00086.pdb 59 DDYEQDLMADAAEKLSDQYDKI- 80 usage_00087.pdb 57 DDYEQDLMADAAEKLSDQYDKIS 79 usage_00088.pdb 60 DDYEQDLMADAAEKLSDQYDKI- 81 usage_00089.pdb 59 DDYEQDLMADAAEKLSDQYDKI- 80 usage_00090.pdb 57 DDYEQDLMADAAEKLSDQYDKIS 79 usage_00091.pdb 57 DDYEQDLMADAAEKLSDQYDKI- 78 usage_00092.pdb 60 DDYEQDLMADAAEKLSDQYDKI- 81 dd e dl A l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################