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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:20:19 2021
# Report_file: c_0143_9.html
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#====================================
# Aligned_structures: 15
#   1: usage_00011.pdb
#   2: usage_00012.pdb
#   3: usage_00039.pdb
#   4: usage_00162.pdb
#   5: usage_00163.pdb
#   6: usage_00164.pdb
#   7: usage_00279.pdb
#   8: usage_00302.pdb
#   9: usage_00303.pdb
#  10: usage_00304.pdb
#  11: usage_00305.pdb
#  12: usage_00306.pdb
#  13: usage_00323.pdb
#  14: usage_00324.pdb
#  15: usage_00369.pdb
#
# Length:        109
# Identity:       64/109 ( 58.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/109 ( 65.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            5/109 (  4.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00011.pdb         1  -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD   59
usage_00012.pdb         1  -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD   59
usage_00039.pdb         1  --VMTQTPKFMSTTVGDRVSITCKASQNVGTPVAWYQQKPGQSPKLLIYSASNRYTGVPD   58
usage_00162.pdb         1  --VMTQSPKSMSMSVGERVTLTCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPD   58
usage_00163.pdb         1  --VMTQSPKSMSMSVGERVTLTCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPD   58
usage_00164.pdb         1  --VMTQSPKSMSMSVGERVTLTCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPD   58
usage_00279.pdb         1  --QMIQSQKFMSTSVGDRVTVTCKASQNVGTNVAWYQQKPGQSPNALIYSASYRYSGVPD   58
usage_00302.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00303.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00304.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00305.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00306.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00323.pdb         1  DIVMTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSASNRYSGVPD   60
usage_00324.pdb         1  DIVMTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSASNRYSGVPD   60
usage_00369.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
                             vMtQ  K MS sVG RV  TCKAS  V T V WYQ KP QSPk LIY AS RY GVPD

usage_00011.pdb        60  RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI---  105
usage_00012.pdb        60  RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI---  105
usage_00039.pdb        59  RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEIKRT  107
usage_00162.pdb        59  RFTGSGSATDFTLTISSVQAEDLADYHCGQSYSTPYTFGGGTKLEI---  104
usage_00163.pdb        59  RFTGSGSATDFTLTISSVQAEDLADYHCGQSYSTPYTFGGGTKLEI---  104
usage_00164.pdb        59  RFTGSGSATDFTLTISSVQAEDLADYHCGQSYSTPYTFGGGTKLEI---  104
usage_00279.pdb        59  RFTGSGSGTDFTLTITNVQSEDLADYFCQQYNSYPLTFGTGTKLDLKRA  107
usage_00302.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
usage_00303.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
usage_00304.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
usage_00305.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
usage_00306.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
usage_00323.pdb        61  RFTGSASGTDFTLTITNVQSEDLAEYFCQQYNSYPYTFGGGTKLEI---  106
usage_00324.pdb        61  RFTGSASGTDFTLTITNVQSEDLAEYFCQQYNSYPYTFGGGTKLEI---  106
usage_00369.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPRTFGGGTKLEIKRA  109
                           RFTGS S TDFT TI   Q EDLA Y C Q  S P TFGgGTK ei   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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