################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:29 2021 # Report_file: c_0083_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00018.pdb # 2: usage_00020.pdb # 3: usage_00032.pdb # 4: usage_00059.pdb # 5: usage_00156.pdb # 6: usage_00158.pdb # 7: usage_00255.pdb # 8: usage_00257.pdb # 9: usage_00344.pdb # 10: usage_00427.pdb # 11: usage_00437.pdb # # Length: 214 # Identity: 107/214 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 124/214 ( 57.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/214 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 --PQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 57 usage_00020.pdb 1 -LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 58 usage_00032.pdb 1 ---QMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 56 usage_00059.pdb 1 --PQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 57 usage_00156.pdb 1 -LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 58 usage_00158.pdb 1 -LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 58 usage_00255.pdb 1 -LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 58 usage_00257.pdb 1 -LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 58 usage_00344.pdb 1 ---EMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCT 57 usage_00427.pdb 1 ELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG-VVPRLVEFMRENQPEM 59 usage_00437.pdb 1 -TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCT 59 M l Sdd QLsaT KFR LS E PPID VI VV R VEF n usage_00018.pdb 58 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 117 usage_00020.pdb 59 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 118 usage_00032.pdb 57 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 116 usage_00059.pdb 58 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 117 usage_00156.pdb 59 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 118 usage_00158.pdb 59 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 118 usage_00255.pdb 59 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 118 usage_00257.pdb 59 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 118 usage_00344.pdb 58 LQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSV 117 usage_00427.pdb 60 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 119 usage_00437.pdb 60 LQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTM 119 LQ EaAWaLTNIASGtS QTk V A AVP FI LL V EQA WALGN AGDSt usage_00018.pdb 118 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 176 usage_00020.pdb 119 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 177 usage_00032.pdb 117 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 175 usage_00059.pdb 118 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 176 usage_00156.pdb 119 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 177 usage_00158.pdb 119 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 177 usage_00255.pdb 119 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 177 usage_00257.pdb 119 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 177 usage_00344.pdb 118 CRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRL 177 usage_00427.pdb 120 YRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKL 178 usage_00437.pdb 120 CRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWL 179 RDYVL Cn P L Lf R A W LSNLCRGK P P VS Lp L L usage_00018.pdb 177 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 210 usage_00020.pdb 178 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 211 usage_00032.pdb 176 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 209 usage_00059.pdb 177 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 210 usage_00156.pdb 178 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 211 usage_00158.pdb 178 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 211 usage_00255.pdb 178 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 211 usage_00257.pdb 178 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 211 usage_00344.pdb 178 LFSSDSDLLADACWALSYLSDGPNEKIQAVID-- 209 usage_00427.pdb 179 IYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR 212 usage_00437.pdb 180 LFVSDTDVLADACWALSYLSDGPNDKIQAVIDA- 212 s Dt L DACWA SYLSDGP e IQAVID #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################