################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:56 2021 # Report_file: c_1172_157.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00493.pdb # 2: usage_00945.pdb # 3: usage_02471.pdb # 4: usage_02954.pdb # 5: usage_02955.pdb # 6: usage_02956.pdb # 7: usage_03472.pdb # 8: usage_04045.pdb # 9: usage_04046.pdb # 10: usage_05125.pdb # 11: usage_05234.pdb # # Length: 30 # Identity: 12/ 30 ( 40.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 30 ( 56.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 30 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00493.pdb 1 --TQTKIIVQDGDNFKTKTNSTFRNYDLDF 28 usage_00945.pdb 1 RLTQTKIIVQDGDNFKTKTNSTFRNYDLD- 29 usage_02471.pdb 1 --KQTKVIVQNGDKFETKTLSTFRNYEVNF 28 usage_02954.pdb 1 --TQTKVIDQDGDNFKTKTTSTFRNLDVDF 28 usage_02955.pdb 1 ---QTKVIDQDGDNFKTKTTSTFRNLDVDF 27 usage_02956.pdb 1 ---QTKVIDQDGDNFKTKTTSTFRNLDVDF 27 usage_03472.pdb 1 --TQTKVIDQDGDNFKTKTTSTFRNYDVDF 28 usage_04045.pdb 1 --TQTLVIDQDGDNFKVKCTSTFWNYDVDF 28 usage_04046.pdb 1 --TQTLVIDQDGDNFKVKCTSTFWNYDVDF 28 usage_05125.pdb 1 ---QTKVIDQDGDNFKTKTTSTFRNYDVDF 27 usage_05234.pdb 1 --TQTLVIDQDGDNFKVKCTSTFWNYDVDF 28 QT I QdGDnFk K STF N d d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################