################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:36 2021 # Report_file: c_0471_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00062.pdb # 4: usage_00063.pdb # 5: usage_00108.pdb # 6: usage_00147.pdb # 7: usage_00148.pdb # 8: usage_00150.pdb # 9: usage_00168.pdb # # Length: 126 # Identity: 5/126 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/126 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/126 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 GEVLDHVLLAGPP---GLGKTTLAHIIASELQ---TNIHVTSGPVL-VKQGDMAA-ILTS 52 usage_00061.pdb 1 GEVLDHVLLAGPP---GLGKTTLAHIIASELQ---TNIHVTSGPVL-VKQGDMAA-ILTS 52 usage_00062.pdb 1 GEVLDHVLLAGPP---GLGKTTLAHIIASELQ---TNIHVTSGPVL-VKQGDMAA-ILTS 52 usage_00063.pdb 1 GEVLDHVLLAGPP---GLGKTTLAHIIASELQ---TNIHVTSGPVL-VKQGDMAA-ILTS 52 usage_00108.pdb 1 -----FIYVWG-EEGA--GKSHLLQAWVAQALEAGKNAAYIDAASMPL-TDAAFEA---- 47 usage_00147.pdb 1 NECLDHILFSGPA---GLGKTTLANIISYE-S---ANIKTTAAP-I-EKSGDLAA-ILTN 50 usage_00148.pdb 1 NECLDHILFSGPA---GLGKTTLANIISYE-S---ANIKTTAAP-I-EKSGDLAA-ILTN 50 usage_00150.pdb 1 -----SMILWGPP---GTGKTTLAEVIARYAN---ADVERISAVTS-G-VKEIRE-AIER 46 usage_00168.pdb 1 GEVLDHVLLAGPP---GLGRTTLAHIIASELQ---TNIHVTSGPVL-VKQGDMAA-ILTS 52 G GkttLa i n usage_00060.pdb 53 L--ER----GDVLFIDEIHRL---NKAVEELLYSAIEDFQI----------DI---QPFT 90 usage_00061.pdb 53 L--ER----GDVLFIDEIHRL---NKAVEELLYSAIEDFQI----------DI---QPFT 90 usage_00062.pdb 53 L--ER----GDVLFIDEIHRL---NKAVEELLYSAIEDFQIDI-------MDI---QPFT 93 usage_00063.pdb 53 L--ER----GDVLFIDEIHRL---NKAVEELLYSAIEDFQI----------DI---QPFT 90 usage_00108.pdb 48 ----------EYLAVDQVEKLGNEEQALLFSIFNRFRN-----------------SGKGF 80 usage_00147.pdb 51 L--SE----GDILFIDEIHRL---SPAIEEVLYPAEDY-----RLAQTIKIDL---PKFT 93 usage_00148.pdb 51 L--SE----GDILFIDEIHRL---SPAIEEVLYPAEDY------------------PKFT 83 usage_00150.pdb 47 ARQNRNAGRRTILFVDEVHRF---NKSQQDAFLPHIED-----------------G-TIT 85 usage_00168.pdb 53 L--ER----GDVLFIDEIHRL---NKAVEELLYSAIEDFQI----------DIDI-QPFT 92 Lf De hrl a t usage_00060.pdb 91 LVGAT- 95 usage_00061.pdb 91 LVGAT- 95 usage_00062.pdb 94 LVGST- 98 usage_00063.pdb 91 LVGAT- 95 usage_00108.pdb 81 LLLGS- 85 usage_00147.pdb 94 LIGATT 99 usage_00148.pdb 84 LIGATT 89 usage_00150.pdb 86 FIGAT- 90 usage_00168.pdb 93 LVGAT- 97 l g t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################