################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:15 2021 # Report_file: c_0328_101.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00227.pdb # 2: usage_00241.pdb # 3: usage_00243.pdb # # Length: 163 # Identity: 32/163 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 134/163 ( 82.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/163 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00227.pdb 1 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTT 60 usage_00241.pdb 1 -VAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 59 usage_00243.pdb 1 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 60 VaWsnlGcvfnaqgeIwlAihhFeKavTlDPnFldAyInlgnvlkearifDrAvaAYlr usage_00227.pdb 61 AARLF--THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQ 118 usage_00241.pdb 60 ALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 119 usage_00243.pdb 61 ALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 120 AlsLs havvhgnLacvyyeqGlIdLAidtyrraieLqphfPdaycnLanalkeKgsva usage_00227.pdb 119 TAINHFQNALLLVKKTQSNEKP-----WAATWANLGHAYRKLK 156 usage_00241.pdb 120 EAEDCYNTALRLCP--------T----HADSLNNLANIKREQG 150 usage_00243.pdb 121 EAEDCYNTALRLCP--------THADSYRKALEV--------- 146 eAedcyntALrLcp a l n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################