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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:46 2021
# Report_file: c_1101_45.html
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#====================================
# Aligned_structures: 5
#   1: usage_00062.pdb
#   2: usage_00261.pdb
#   3: usage_00620.pdb
#   4: usage_00622.pdb
#   5: usage_00764.pdb
#
# Length:        172
# Identity:        4/172 (  2.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     17/172 (  9.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           68/172 ( 39.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00062.pdb         1  ----SFADHREHILQTAKALVEDTKVLV--TGAAG------------TQDQLANAAQNAV   42
usage_00261.pdb         1  QLLRGVGAAATAVTQALNELLQHVKAHATG---------------------AG-PAGRYD   38
usage_00620.pdb         1  -----FADHREGILKTAKVLVEDTKVLV--QNAAG------------SQEKLAQAAQSSV   41
usage_00622.pdb         1  -----FADHREGILKTAKVLVEDTKVLV--QNAAG------------SQEKLAQAAQSSV   41
usage_00764.pdb         1  NFEEQILEAAKSIAAATSALVKAASAAQ--RELVAQGKVGAIPANALDDGQWSQGLISAA   58
                                       i      Lv   k                              a    

usage_00062.pdb        43  STITQLAEAVKRGACS-LGS---TQPDSQV-VINAVKDVASALGDLINCTKLAS------   91
usage_00261.pdb        39  QATDTILTVTENIFSSMG-----DA-G-E--MVRQARILAQATSDLVNAIKADA--EGES   87
usage_00620.pdb        42  ATITRLADVVKLGAAS-LGA---EDPETQVVLINAVKDVAKALGDLISATKAAAGKV---   94
usage_00622.pdb        42  ATITRLADVVKLGAAS-LGA---EDPETQVVLINAVKDVAKALGDLISATKAAAGKV---   94
usage_00764.pdb        59  RMVAAATNNLCEAANA-AV-QGHASQE-K--LISSAKQVAASTAQLLVACKVKA--D---  108
                                        a s                i   k vA a  dL  a K  a      

usage_00062.pdb        92  S-QDLKESARVVLNVSSLLKTVKAVEDEHTRGTRAEATVEAISQEIRALEH-  141
usage_00261.pdb        88  D-LENSRK--LLSAAKILADATAKMVEAAKGAA-------------------  117
usage_00620.pdb        95  GDDPAVW---QLKNSAKVVTNVTSLLKTVKAVEDEA----------------  127
usage_00622.pdb        95  GDDPAVW---QLKNSAKVVTNVTSLLKTVKAVEDEA---------------T  128
usage_00764.pdb       109  QDSEAMKR--LQAAGNAVKRASDNLVKAAQKAA-------------------  139
                                                                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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