################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:29 2021 # Report_file: c_1376_22.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00177.pdb # 2: usage_00201.pdb # 3: usage_00555.pdb # 4: usage_00570.pdb # 5: usage_00571.pdb # 6: usage_00912.pdb # 7: usage_00913.pdb # 8: usage_00958.pdb # 9: usage_00963.pdb # 10: usage_00982.pdb # 11: usage_00985.pdb # 12: usage_00990.pdb # 13: usage_00991.pdb # 14: usage_01062.pdb # 15: usage_01372.pdb # # Length: 82 # Identity: 4/ 82 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 82 ( 43.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 82 ( 56.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00201.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00555.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00570.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00571.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00912.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00913.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00958.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00963.pdb 1 SWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVESTTVATRRLSGFLRTLADRL--- 57 usage_00982.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00985.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00990.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_00991.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_01062.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 usage_01372.pdb 1 TKKQQLHFISSYLPAFQ------------NDFENL---------STEEKSIIKEEMLLEV 39 tkkqqLhfisSyLpafq ndfenl steeksiikeemL usage_00177.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00201.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00555.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00570.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00571.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00912.pdb 40 NRFALASHFLWGLWSIVQAKI- 60 usage_00913.pdb 40 NRFALASHFLWGLWSIVQAKI- 60 usage_00958.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00963.pdb ---------------------- usage_00982.pdb 40 NRFALASHFLWGLWSIVQA--- 58 usage_00985.pdb 40 NRFALASHFLWGLWSIVQAKI- 60 usage_00990.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_00991.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_01062.pdb 40 NRFALASHFLWGLWSIVQAKIS 61 usage_01372.pdb 40 NRFALASHFLWGLWSIVQAKI- 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################