################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:35 2021 # Report_file: c_0404_40.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00150.pdb # 2: usage_00213.pdb # 3: usage_00250.pdb # 4: usage_00268.pdb # 5: usage_00351.pdb # # Length: 124 # Identity: 22/124 ( 17.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/124 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/124 ( 41.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00150.pdb 1 PKAAPSVTLFPPS---------ATLVCLISD----AVTVAWKADSSPVKAGVETTTPS-K 46 usage_00213.pdb 1 -----EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK 55 usage_00250.pdb 1 -----SVTLFPPSSEELQ-ANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPS-K 53 usage_00268.pdb 1 PKSPPSVTLFPPSTEELN-GNKATLVCLISDFYPGSVTVVWKADGSTITRNVETTRAS-K 58 usage_00351.pdb 1 -----SVTLFPPSSEELQ-ANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPS-K 53 sVtlFpPS ATLVCLisd Vtv Wkad s v gVeTt s K usage_00150.pdb 47 Q---------AASSYLSLTPES----H-RSYSCQVTHE----------------GSTVEK 76 usage_00213.pdb 56 EQPALNDSRYALSSRLRVSAT-FWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSA 114 usage_00250.pdb 54 QS---N-NKYAASSYLSLTPE-QWKSH-RSYSCQVTHE----------------GSTVEK 91 usage_00268.pdb 59 QS---N-SKYAASSYLSLTSS-DWKSK-GSYSCEVTHE----------------GSTVTK 96 usage_00351.pdb 54 QS---N-NKYAASSYLSLTPE-QWKSH-KSYSCQVTHE----------------GSTVEK 91 q AaSSyLslt sysCqVthe gstV k usage_00150.pdb 77 TVAP 80 usage_00213.pdb 115 EAWG 118 usage_00250.pdb 92 TVAP 95 usage_00268.pdb 97 TVK- 99 usage_00351.pdb 92 TVA- 94 tv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################