################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:01:39 2021 # Report_file: c_0801_5.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00009.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00026.pdb # 6: usage_00028.pdb # 7: usage_00029.pdb # 8: usage_00033.pdb # 9: usage_00040.pdb # 10: usage_00041.pdb # 11: usage_00042.pdb # 12: usage_00047.pdb # 13: usage_00054.pdb # 14: usage_00055.pdb # 15: usage_00058.pdb # 16: usage_00059.pdb # 17: usage_00060.pdb # 18: usage_00061.pdb # 19: usage_00062.pdb # 20: usage_00075.pdb # 21: usage_00092.pdb # 22: usage_00127.pdb # 23: usage_00140.pdb # 24: usage_00141.pdb # # Length: 120 # Identity: 24/120 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/120 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/120 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 EELVKIGKLNLVDLAGSE---N----------------------INQSLLTLGRVITALV 35 usage_00021.pdb 1 -------------LAGSE---NIG-RSGAVDKR---AREA-GN-INQSLLTLGRVITALV 38 usage_00022.pdb 1 EELVKIGKLNLVDLAGSE---NIG-RSGAVDKR---AREA-GN-INQSLLTLGRVITALV 51 usage_00023.pdb 1 ----------LVDLAGSE--------------R---AREA-GN-INQSLLTLGRVITALV 31 usage_00026.pdb 1 -GSVKVSHLNLVDLAGSE---RAA---------RLKEGC----NINRSLFILGQVIKKLS 43 usage_00028.pdb 1 -----HGKFSLIDLAGNE---R-------DRQT---RLEG-AE-INKSLLALKECIRALG 40 usage_00029.pdb 1 -----IGKLNLVDLAGS----------------------------NQSLLTLGRVITALV 27 usage_00033.pdb 1 EELVKIGKLNLVDLAGSE---N--------------------N-INQSLLTLGRVITALV 36 usage_00040.pdb 1 EELVKIGKLNLVDLAGSE---N-----------------------NQSLLTLGRVITALV 34 usage_00041.pdb 1 -ELVKIGKLNLVDLAGSE---N--------------------N-INQSLLTLGRVITALV 35 usage_00042.pdb 1 ----------LVDLAGSE---N-----------------------NQSLLTLGRVITALV 24 usage_00047.pdb 1 EELVKIGKLNLVDLAGSE---N---------------------NINQSLLTLGRVITALV 36 usage_00054.pdb 1 -ELVKIGKLNLVDLAGSEEAGN----------------------INQSLLTLGRVITALV 37 usage_00055.pdb 1 ----------LVDLAGSE----------------------NGN-INQSLLTLGRVITALV 27 usage_00058.pdb 1 --LVKIGKLNLVDLAGSE---N----------------------INQSLLTLGRVITALV 33 usage_00059.pdb 1 ----KIGKLNLVDLAGSE---N--------------------N-INQSLLTLGRVITALV 32 usage_00060.pdb 1 -----IGKLNLVDLAGSE---N-----------------------NQSLLTLGRVITALV 29 usage_00061.pdb 1 --LVKIGKLNLVDLAGSE---N----------R---AREA-GN-INQSLLTLGRVITALV 40 usage_00062.pdb 1 ----------LVDLAGSE---N----------R---AREA-GN-INQSLLTLGRVITALV 32 usage_00075.pdb 1 EELVKIGKLNLVDLAGSE---N----------------------INQSLLTLGRVITALV 35 usage_00092.pdb 1 EELVKIGKLNLVDLAGSE---NIG-RSGAVDKR---AREA-GN-INQSLLTLGRVITALV 51 usage_00127.pdb 1 -GAHSYGTLNLVDLAGSE---RINV-SQVVGDR---LRET-QN-INKSLSALGDVIHALG 50 usage_00140.pdb 1 ---VKIGKLNLVDLAGSE---NIG-R------------------INQSLLTLGRVITALV 35 usage_00141.pdb 1 ---VKIGKLNLVDLAGSE---N----------------------INQSLLTLGRVITALV 32 LAGs N SL Lg vI aL usage_00009.pdb 36 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 89 usage_00021.pdb 39 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 92 usage_00022.pdb 52 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 105 usage_00023.pdb 32 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 85 usage_00026.pdb 44 DGQ---VGGFINYRDSKLTRILQNSLGG-NAKTRIICTITPV--SFDETLTALQFASTAK 97 usage_00028.pdb 41 RNK---P--HTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRV- 94 usage_00029.pdb 28 DRA---P--HVPYRESKLTRLLQESLGG-RTKTSIIATISPGHKDIEETLSTLEYAHRAK 81 usage_00033.pdb 37 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 90 usage_00040.pdb 35 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 88 usage_00041.pdb 36 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 89 usage_00042.pdb 25 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRA- 77 usage_00047.pdb 37 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 90 usage_00054.pdb 38 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 91 usage_00055.pdb 28 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 81 usage_00058.pdb 34 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 87 usage_00059.pdb 33 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 86 usage_00060.pdb 30 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 83 usage_00061.pdb 41 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 94 usage_00062.pdb 33 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 86 usage_00075.pdb 36 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 89 usage_00092.pdb 52 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 105 usage_00127.pdb 51 QPDSTKR--HIPFRNSKLTYLLQYSLTG-DSKTLMFVNISPSSSHINETLNSLRFASKVN 107 usage_00140.pdb 36 ERT---P--HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 89 usage_00141.pdb 33 E--------HVPYRESKLTRILQDSLGG-RTRTSIIATISPASLNLEETLSTLEYAHRAK 83 h p R SKLT Lq Sl G T i tIsP eTL L A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################