################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:50 2021 # Report_file: c_1247_133.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00531.pdb # 2: usage_00778.pdb # 3: usage_00779.pdb # 4: usage_00831.pdb # 5: usage_00891.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 43 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 43 ( 53.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00531.pdb 1 ASVMSLGG--AATEEDANLISQLFGSIGKIWK----------- 30 usage_00778.pdb 1 --SVFVSG---NDAAAKAEVATLLKSLGHQDV--------IDL 30 usage_00779.pdb 1 --SVFVSG---NDAAAKAEVATLLKSLGHQDV--------IDL 30 usage_00831.pdb 1 --DVCVCHSEE-DLVAAQDLVSYLEGS-----GAISELCQ--- 32 usage_00891.pdb 1 --TVVIYGD-KS-NWWAAYALWVFTLFGHADV--------RLL 31 v g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################