################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:16 2021 # Report_file: c_1335_20.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00017.pdb # 2: usage_00263.pdb # 3: usage_00276.pdb # 4: usage_00277.pdb # 5: usage_00314.pdb # 6: usage_00315.pdb # 7: usage_00515.pdb # 8: usage_00516.pdb # 9: usage_00659.pdb # 10: usage_00693.pdb # 11: usage_00725.pdb # 12: usage_00806.pdb # 13: usage_00807.pdb # 14: usage_01236.pdb # 15: usage_01237.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 43 ( 46.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 43 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ---ARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 40 usage_00263.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00276.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00277.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00314.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00315.pdb 1 ---ARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 40 usage_00515.pdb 1 --DARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 41 usage_00516.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00659.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_00693.pdb 1 ---ARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 40 usage_00725.pdb 1 NASKTALLVFCEEFIGHGGKLIDCQVLN---DHTASL-G---- 35 usage_00806.pdb 1 ---VDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAINA--- 37 usage_00807.pdb 1 ---VDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAINA--- 37 usage_01236.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 usage_01237.pdb 1 ----RSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG 39 sv k kyv lgglf weid gd ln n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################