################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:32 2021 # Report_file: c_0022_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # # Length: 242 # Identity: 93/242 ( 38.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/242 ( 38.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/242 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 GFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQI 60 usage_00018.pdb 1 GFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQI 60 usage_00024.pdb 1 GFTGAYVRNALEKEEIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIKKEHVQALLEQL 60 usage_00025.pdb 1 GFTGAYVRNALEKEEIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIKKEHVQALLEQL 60 GF G L I FIEV DTRINVK K QETE N P I LL Q usage_00017.pdb 61 KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKP 120 usage_00018.pdb 61 KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKP 120 usage_00024.pdb 61 TELEKGDVLVLAGSVPQAPQ-TIYRS-TQIAKERGAFVAVDTSGEALHEVLAAKPSFIKP 118 usage_00025.pdb 61 TELEKGDVLVLAGSVPQAPQ-TIYRS-TQIAKERGAFVAVDTSGEALHEVLAAKPSFIKP 118 D AGSVP Y QI GA VD E VL P FIKP usage_00017.pdb 121 NKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGK 180 usage_00018.pdb 121 NKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGK 180 usage_00024.pdb 119 NHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEG-FHVNVPSGE 177 usage_00025.pdb 119 NHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEG-FHVNVPSGE 177 N EL S D I L G S VS GDGA E P G usage_00017.pdb 181 VVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRDAIEKIKSQV-- 238 usage_00018.pdb 181 VVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRDAIEKIKSQV-- 238 usage_00024.pdb 178 VRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSDGFCTREEVERLQQQLQR 237 usage_00025.pdb 178 VRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSDGFCTREEVERLQQQLQR 237 V N VG GDS VAG A G S E A AVA G ATAF TR E Q usage_00017.pdb -- usage_00018.pdb -- usage_00024.pdb 238 TI 239 usage_00025.pdb 238 T- 238 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################