################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:09 2021 # Report_file: c_0154_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00026.pdb # 10: usage_00035.pdb # 11: usage_00036.pdb # # Length: 159 # Identity: 37/159 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/159 ( 52.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/159 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTK--------------ERVVIQYHYTQWP 45 usage_00010.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKV------------NERVVIQYHYTQWP 47 usage_00012.pdb 1 EMIFEDTNLKLTLISEDIKSYYTVRQLELENLTT-----------QETREILHFHYTTWP 49 usage_00013.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 59 usage_00014.pdb 1 GTETH-GLVQVTLLDTVELATYCVRTFALYKNGS-----------SEKREVRQFQFTAWP 48 usage_00023.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTK-------------NERVVIQYHYTQWP 46 usage_00024.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTK-------------NERVVIQYHYTQWP 46 usage_00025.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKQ------------NERVVIQYHYTQWP 47 usage_00026.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKVK----------QNERVVIQYHYTQWP 49 usage_00035.pdb 1 NSEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKVK----------QNERVVIQYHYTQWP 49 usage_00036.pdb 1 NTEEY-GNIIVTLKSTKIHACYTVRRFSIRNTKVK----------QNERVVIQYHYTQWP 49 e gn vTL st i a YtVR f n R v q hyT WP usage_00009.pdb 46 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 103 usage_00010.pdb 48 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 105 usage_00012.pdb 50 DFGVP--PASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRPS 107 usage_00013.pdb 60 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 117 usage_00014.pdb 49 DHGVPEHPTPFLAFLRRVKTCN--PPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKT 106 usage_00023.pdb 47 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 104 usage_00024.pdb 47 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 104 usage_00025.pdb 48 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 105 usage_00026.pdb 50 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 107 usage_00035.pdb 50 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 107 usage_00036.pdb 50 DMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKST 107 D GVP p L F rr Pe GPv VHcSAGvGRtGt iviD mL ik t usage_00009.pdb 104 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILG- 140 usage_00010.pdb 106 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILG- 142 usage_00012.pdb 108 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG---- 142 usage_00013.pdb 118 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAIL-- 153 usage_00014.pdb 107 -VDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTC- 143 usage_00023.pdb 105 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI--- 139 usage_00024.pdb 105 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILG- 141 usage_00025.pdb 106 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGK 143 usage_00026.pdb 108 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGK 145 usage_00035.pdb 108 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI--- 142 usage_00036.pdb 108 -VNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGK 145 V g l R qRnylvQTe QyiFihdAllEa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################