################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:21 2021 # Report_file: c_1447_18.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01579.pdb # 2: usage_02392.pdb # 3: usage_02448.pdb # 4: usage_02634.pdb # 5: usage_02635.pdb # 6: usage_02642.pdb # 7: usage_02880.pdb # 8: usage_02881.pdb # 9: usage_03625.pdb # 10: usage_03654.pdb # 11: usage_03655.pdb # # Length: 23 # Identity: 2/ 23 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 23 ( 34.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 23 ( 65.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01579.pdb 1 AFIKAG------GESEITLVG-- 15 usage_02392.pdb 1 ------FIKFMPDGSISEEV--- 14 usage_02448.pdb 1 ------FIKFMPDGSISEEVLEK 17 usage_02634.pdb 1 ------FIKFMPDGSISEEVLEK 17 usage_02635.pdb 1 ------FIKFMPDGSISEEVLEK 17 usage_02642.pdb 1 ------FIKFMPDGSISEEVLEK 17 usage_02880.pdb 1 ------FIKFMPDGSISEEV--- 14 usage_02881.pdb 1 ------FIKFMPDGSISEEVLEK 17 usage_03625.pdb 1 ------FIKFMPDGSISEEV--- 14 usage_03654.pdb 1 ------FIK-FPDGSISEEVLEK 16 usage_03655.pdb 1 ------FIK-FPDGSISEEVLEK 16 dgSiseeV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################