################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:12:49 2021 # Report_file: c_1291_89.html ################################################################################################ #==================================== # Aligned_structures: 51 # 1: usage_00013.pdb # 2: usage_00085.pdb # 3: usage_00105.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # 6: usage_00183.pdb # 7: usage_00195.pdb # 8: usage_00197.pdb # 9: usage_00232.pdb # 10: usage_00249.pdb # 11: usage_00294.pdb # 12: usage_00310.pdb # 13: usage_00311.pdb # 14: usage_00331.pdb # 15: usage_00343.pdb # 16: usage_00438.pdb # 17: usage_00456.pdb # 18: usage_00457.pdb # 19: usage_00479.pdb # 20: usage_00480.pdb # 21: usage_00481.pdb # 22: usage_00487.pdb # 23: usage_00718.pdb # 24: usage_00719.pdb # 25: usage_00855.pdb # 26: usage_00873.pdb # 27: usage_00874.pdb # 28: usage_00875.pdb # 29: usage_00915.pdb # 30: usage_00949.pdb # 31: usage_01037.pdb # 32: usage_01045.pdb # 33: usage_01069.pdb # 34: usage_01092.pdb # 35: usage_01109.pdb # 36: usage_01140.pdb # 37: usage_01144.pdb # 38: usage_01145.pdb # 39: usage_01146.pdb # 40: usage_01186.pdb # 41: usage_01230.pdb # 42: usage_01259.pdb # 43: usage_01397.pdb # 44: usage_01401.pdb # 45: usage_01403.pdb # 46: usage_01404.pdb # 47: usage_01449.pdb # 48: usage_01484.pdb # 49: usage_01505.pdb # 50: usage_01529.pdb # 51: usage_01551.pdb # # Length: 26 # Identity: 0/ 26 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 26 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 26 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00085.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00105.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00106.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00107.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00183.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00195.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00197.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00232.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00249.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00294.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00310.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00311.pdb 1 -LRNALDGYPVSI-D-RKHKAAVQIK 23 usage_00331.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00343.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00438.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00456.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00457.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00479.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00480.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00481.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00487.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00718.pdb 1 GATVM--EGFYVI-FDRAQKRVGFAA 23 usage_00719.pdb 1 GATVM--EGFYVI-FDRAQKRVGFAA 23 usage_00855.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00873.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00874.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00875.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00915.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_00949.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01037.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01045.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01069.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01092.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01109.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01140.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01144.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01145.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01146.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01186.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01230.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01259.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01397.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01401.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01403.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01404.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01449.pdb 1 --GDR--EGYWSITVR--ANWRITFQ 20 usage_01484.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01505.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01529.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 usage_01551.pdb 1 GAVIM--EGFYVV-FDRARKRIGFAV 23 eg k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################