################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:48:52 2021 # Report_file: c_0587_20.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00017.pdb # 4: usage_00024.pdb # 5: usage_00027.pdb # 6: usage_00028.pdb # 7: usage_00030.pdb # 8: usage_00055.pdb # 9: usage_00063.pdb # 10: usage_00072.pdb # 11: usage_00074.pdb # 12: usage_00077.pdb # 13: usage_00092.pdb # 14: usage_00094.pdb # 15: usage_00095.pdb # 16: usage_00096.pdb # 17: usage_00135.pdb # 18: usage_00149.pdb # 19: usage_00150.pdb # 20: usage_00308.pdb # 21: usage_00318.pdb # 22: usage_00327.pdb # 23: usage_00328.pdb # 24: usage_00347.pdb # 25: usage_00360.pdb # 26: usage_00361.pdb # 27: usage_00378.pdb # 28: usage_00379.pdb # # Length: 105 # Identity: 15/105 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/105 ( 36.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/105 ( 24.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00012.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00017.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00024.pdb 1 SLYAIKVLNSS-GSGSYSAIVSGIEWATQNG----L-DVINMSLGGPSGS----TALKQA 50 usage_00027.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00028.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00030.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00055.pdb 1 DLWAYKVLLDS-GSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSANN----SLISSA 55 usage_00063.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00072.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00074.pdb 1 RIAAYKVCW-ND-GCSDTDILAAYDDAIADG----V-DIISLSVGGANPRHYFVDAIAIG 53 usage_00077.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00092.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00094.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00095.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00096.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00135.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00149.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00150.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00308.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00318.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00327.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00328.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00347.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00360.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00361.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00378.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 usage_00379.pdb 1 SLYAVKVLNSS-GSGSYSGIVSGIEWATTNG----M-DVINMSLGGASGS----TAMKQA 50 l A KVl s sgs I i A g d I mSlGg a a usage_00011.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVG----- 90 usage_00012.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00017.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00024.pdb 51 VDKAYASGIVVVAAAGNSGNSGSQNTIGYPAKYDSVIAVGAVD-- 93 usage_00027.pdb 51 VDNAYARGVVVVAAAGNSGSSGNTNTIGYPAKYDSVIAVG----- 90 usage_00028.pdb 51 VDNAYARGVVVVAAAGNSGSSGNTNTIGYPAKYDSVIAVG----- 90 usage_00030.pdb 51 VDNAYARGVVVVAAAGNSGSSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00055.pdb 56 VNYAYSKGVLIVAAAGNSGYS--QGTIGYPGALPNAIAVAALEN- 97 usage_00063.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00072.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00074.pdb 54 SFHAVERGILTSNSAGNGGPNFFTTA----SLSPWLLSVAASTMD 94 usage_00077.pdb 51 VDNAYARGVVVVAAAGNSGSSGSTNTIGYPAKYDSVIAVG----- 90 usage_00092.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00094.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00095.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00096.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00135.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVG----- 90 usage_00149.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00150.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVG----- 90 usage_00308.pdb 51 VDNAYARGVVVVAAAGNSGSSGNTNTIGYPAKYDSVIAVGAVD-- 93 usage_00318.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00327.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVG----- 90 usage_00328.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00347.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00360.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00361.pdb 51 VDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-- 93 usage_00378.pdb 51 VDNAYARGVVVVAAAGNSG-----NTIGYPAKYDSVIAVG----- 85 usage_00379.pdb 51 VDNAYARGVVVVAAAGNSGSSGNTNTIGYPAKYDSVIAVGAVD-- 93 v Ay G vaaAGNsG t iaV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################