################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:13 2021 # Report_file: c_0791_118.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00266.pdb # 2: usage_00465.pdb # 3: usage_00466.pdb # 4: usage_00643.pdb # # Length: 73 # Identity: 18/ 73 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 73 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 73 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00266.pdb 1 NVVYIGN-KPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIEN 59 usage_00465.pdb 1 NEIVVRKTKNVEDHVLDVIVLFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVN 60 usage_00466.pdb 1 -EIVVRKTKNVEDHVLDVIVLFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVN 59 usage_00643.pdb 1 HVVYIGK-KPVMNYVLAVITQFHEGAKEVSIKARGRAISRAVDVAEIVRNRFLKDDVDVK 59 k K V VL Vi fn G EVilK Gr IS AVDV R q vn usage_00266.pdb 60 ID-ICTEEII--- 68 usage_00465.pdb 61 VQ-TGSEV----- 67 usage_00466.pdb 60 VQ-TGSEV----- 66 usage_00643.pdb 60 EIKIGTEE-LPTA 71 g E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################