################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:18 2021 # Report_file: c_0618_30.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00025.pdb # 2: usage_00115.pdb # 3: usage_00235.pdb # 4: usage_00236.pdb # 5: usage_00244.pdb # # Length: 61 # Identity: 5/ 61 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 61 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 61 ( 19.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 -T-EIFDILRNC--EPKCGITRVIYGAGINYVVAQKYLDQLVKVGALNIKTENDRKIYEI 56 usage_00115.pdb 1 --LYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKGFAMTQPG-KTNKYRP 57 usage_00235.pdb 1 --ENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSL 58 usage_00236.pdb 1 D-ENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKLAL---YS- 55 usage_00244.pdb 1 D-ENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRLAL----YS- 54 a i al l a gv a Lr L K G n Y usage_00025.pdb - usage_00115.pdb - usage_00235.pdb - usage_00236.pdb 56 L 56 usage_00244.pdb 55 L 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################