################################################################################################
# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:30:58 2021
# Report_file: c_0142_4.html
################################################################################################
#====================================
# Aligned_structures: 11
#   1: usage_00003.pdb
#   2: usage_00004.pdb
#   3: usage_00006.pdb
#   4: usage_00008.pdb
#   5: usage_00024.pdb
#   6: usage_00027.pdb
#   7: usage_00029.pdb
#   8: usage_00038.pdb
#   9: usage_00040.pdb
#  10: usage_00041.pdb
#  11: usage_00042.pdb
#
# Length:        187
# Identity:       21/187 ( 11.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     29/187 ( 15.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           59/187 ( 31.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00003.pdb         1  -EDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV-   58
usage_00004.pdb         1  -EDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV-   58
usage_00006.pdb         1  -PFIIEAIKTLRFYKPTEIQERIIPGALRGES-VGQSQTGTGKTHAYLLPI-EKIKPER-   56
usage_00008.pdb         1  KPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT-   59
usage_00024.pdb         1  SESLLRGIYA----KPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDL-   55
usage_00027.pdb         1  -DVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL-ET-   57
usage_00029.pdb         1  -EDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV-   58
usage_00038.pdb         1  SESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDL-   59
usage_00040.pdb         1  REDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQV-   59
usage_00041.pdb         1  REDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQV-   59
usage_00042.pdb         1  -AAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCL-EQE   58
                                          P  iQ   I     G d       G GKT  f             

usage_00003.pdb        59  --------R-ETQALILAPTRELAVQIQKGLLALGD--Y----MN---VQCHACIGGTNV  100
usage_00004.pdb        59  --------R-ETQALILAPTRELAVQIQKGLLALGD--Y----MN---VQCHACIGGTNV  100
usage_00006.pdb        57  --------A-EVQAVITAPTRELATQIYHETLKITK--F----CPKDRIVARCLIGG-TD  100
usage_00008.pdb        60  --------G-QVSVLVMCHTRELAFQISKEYERFSK--Y----MP--NVKVAVFFGGLSI  102
usage_00024.pdb        56  -----------TQALVLAPTRELAQQIQKVVMAL-G--------------CHACIGGTNV   89
usage_00027.pdb        58  --------PQRLFALVLTPTRELAFQISEQFEALGS--S----IG---VQSAVIVGGIDS  100
usage_00029.pdb        59  --------R-ETQALILAPTRELAVQIQKGLLALGD--Y----MN---VQCHACIGGTNV  100
usage_00038.pdb        60  --------K-ATQALVLAPTRELAQQIQKVVMALGD--Y----MG---ASCHACIGGTNV  101
usage_00040.pdb        60  --------R-ETQALILAPTRELAVQVQKGLLALGD--Y----MN---VQCHACIGGTNV  101
usage_00041.pdb        60  --------R-ETQALILAPTRELAVQVQKGLLALGD--Y----MN---VQSHACI-----   96
usage_00042.pdb        59  KRLPFSKRE-GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPL---LRCALCIGGMSV  114
                                         l   ptRELA Q                                  

usage_00003.pdb       101  GEDIR-KL-DY-GQHVVAGTPGRVFDMIRRR-SLRTRAIKMLVLDEADEMLNKGFKEQIY  156
usage_00004.pdb       101  GEDIR-KL-DY-GQHVVAGTPGRVFDMIRRR-SLRTRAIKMLVLDEADEMLNKGFKEQIY  156
usage_00006.pdb       101  KQKAL-EKLNV-QPHIVIGTPGRINDFIREQ-ALDVHTAHILVVDEADLLDG--------  149
usage_00008.pdb       103  KKDEE-VL-KKNCPHIVVGTPGRILALARNK-SLNLKHIKHFILDECDKMLEQ-------  152
usage_00024.pdb        90  RAEVQ-KL-QMEAPHIIVGTPGRVFDMLNRR-YLSPKYIKMFVLDEADEMLSR-------  139
usage_00027.pdb       101  MSQSL-AL-AK-KPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNM-------  150
usage_00029.pdb       101  GEDIR-KL-DY-GQHVVAGTPGRVFDMIRRR-SLRTRAIKMLVLDEADEMLNK-------  149
usage_00038.pdb       102  RAEVQKLQ-ME-APHIIVGTPGRVFDMLNRR-YLSPKYIKMFVLDEADEMLSR-------  151
usage_00040.pdb       102  GEDIR-KL-DY-GQHVVAGTPGRVFDMIRRR-SLRTRAIKMLVLDEADEMLNK-------  150
usage_00041.pdb        97  GEDIR-KL-DY-GQHVVAGTPGRVFDMIRRR-SLRTRAIKMLVLDEADEMLNK-------  145
usage_00042.pdb       115  KEQME-TI-RH-GVHMMVATPGRLMDLLQKK-MVSLDICRYLALDEADRMIDM-------  163
                                         H    TPGR  d                  DEaD            

usage_00003.pdb       157  DVYRYL-  162
usage_00004.pdb       157  DVYRYL-  162
usage_00006.pdb            -------     
usage_00008.pdb       153  ------L  153
usage_00024.pdb       140  ------G  140
usage_00027.pdb            -------     
usage_00029.pdb       150  ------G  150
usage_00038.pdb       152  ------G  152
usage_00040.pdb       151  ------G  151
usage_00041.pdb       146  ------G  146
usage_00042.pdb       164  ------G  164
                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################