################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:21 2021 # Report_file: c_0959_156.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00156.pdb # 2: usage_00157.pdb # 3: usage_00669.pdb # 4: usage_01193.pdb # # Length: 62 # Identity: 4/ 62 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 62 ( 58.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00156.pdb 1 ----FI-------SAKSSPVIPLDGSVKIQCQAIR-E--AYLTQLMIIKNS----TYREI 42 usage_00157.pdb 1 FPMPFI-------SAKSSPVIPLDGSVKIQCQAIR-E--AYLTQLMIIKNS----TYRE- 45 usage_00669.pdb 1 ----SV-------KEVSGK-------VFLQCQE-SKDLNT-NYLWKKG--K----EELGN 34 usage_01193.pdb 1 ------AKPSLSAQPGP-AVSS-GGDVTLQCQT-RYG--FDQFALYKE--GDPAPYKN-- 45 s V QCQ r l usage_00156.pdb -- usage_00157.pdb -- usage_00669.pdb 35 M- 35 usage_01193.pdb 46 -P 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################