################################################################################################
# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 03:27:41 2021
# Report_file: c_1402_102.html
################################################################################################
#====================================
# Aligned_structures: 26
#   1: usage_00157.pdb
#   2: usage_00204.pdb
#   3: usage_00242.pdb
#   4: usage_00248.pdb
#   5: usage_00424.pdb
#   6: usage_00426.pdb
#   7: usage_00494.pdb
#   8: usage_00495.pdb
#   9: usage_00500.pdb
#  10: usage_00501.pdb
#  11: usage_00502.pdb
#  12: usage_00503.pdb
#  13: usage_00512.pdb
#  14: usage_00515.pdb
#  15: usage_00516.pdb
#  16: usage_00542.pdb
#  17: usage_00654.pdb
#  18: usage_00787.pdb
#  19: usage_00802.pdb
#  20: usage_00803.pdb
#  21: usage_00844.pdb
#  22: usage_00998.pdb
#  23: usage_01002.pdb
#  24: usage_01003.pdb
#  25: usage_01014.pdb
#  26: usage_01015.pdb
#
# Length:         64
# Identity:       55/ 64 ( 85.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     55/ 64 ( 85.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            9/ 64 ( 14.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00157.pdb         1  --SEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   55
usage_00204.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K-ETREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00242.pdb         1  --SEARLVIKEALVERRRAFKRSQK-KSETREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00248.pdb         1  --SEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   55
usage_00424.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K-ETREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00426.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K-ETREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00494.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00495.pdb         1  NLSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00500.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00501.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00502.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00503.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00512.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00515.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00516.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00542.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00654.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00787.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_00802.pdb         1  NLSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00803.pdb         1  NLSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_00844.pdb         1  --SEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   55
usage_00998.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K-ETREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_01002.pdb         1  -LSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   56
usage_01003.pdb         1  NLSEARLVIKEALVERRRAFKRSQK-K--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   57
usage_01014.pdb         1  -LSEARLVIKEALVERRRAFKRSQ-----TREKELESIDVLLEQTTGGNNKDLKNTMQYL   54
usage_01015.pdb         1  NLSEARLVIKEALVERRRAFKRSQKKH--TREKELESIDVLLEQTTGGNNKDLKNTMQYL   58
                             SEARLVIKEALVERRRAFKRSQ     TREKELESIDVLLEQTTGGNNKDLKNTMQYL

usage_00157.pdb        56  TNFS   59
usage_00204.pdb        58  TN--   59
usage_00242.pdb        58  TNF-   60
usage_00248.pdb        56  TNF-   58
usage_00424.pdb        58  TNF-   60
usage_00426.pdb        58  TNF-   60
usage_00494.pdb        57  TN--   58
usage_00495.pdb        58  TNF-   60
usage_00500.pdb        57  TN--   58
usage_00501.pdb        57  TNF-   59
usage_00502.pdb        57  TN--   58
usage_00503.pdb        57  TNF-   59
usage_00512.pdb        57  TN--   58
usage_00515.pdb        57  TN--   58
usage_00516.pdb        57  TN--   58
usage_00542.pdb        57  TNF-   59
usage_00654.pdb        57  TN--   58
usage_00787.pdb        57  TNF-   59
usage_00802.pdb        58  TNF-   60
usage_00803.pdb        58  TNF-   60
usage_00844.pdb        56  TN--   57
usage_00998.pdb        58  TNF-   60
usage_01002.pdb        57  TN--   58
usage_01003.pdb        58  TN--   59
usage_01014.pdb        55  TN--   56
usage_01015.pdb        59  TN--   60
                           TN  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################