################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:58 2021 # Report_file: c_0768_89.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00103.pdb # 2: usage_00351.pdb # 3: usage_00362.pdb # 4: usage_00363.pdb # 5: usage_00365.pdb # 6: usage_00366.pdb # 7: usage_00400.pdb # 8: usage_00482.pdb # 9: usage_00638.pdb # 10: usage_00695.pdb # 11: usage_00719.pdb # # Length: 74 # Identity: 15/ 74 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 74 ( 23.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 74 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 NTIICAPTGCGKTFVSLLICEHHLKKF--PCGQKGKVVFFANQIPVYEQQA----TVFSR 54 usage_00351.pdb 1 NTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGKVVFFANQIPVYEQNK----SVFSK 54 usage_00362.pdb 1 NALICAPTGSGKTFVSILICEHHFQNM--PAGRKAKVVFLATKVPVYEQQK----NVFKH 54 usage_00363.pdb 1 NALICAPTGSGKTFVSILICEHHFQNM--PAGRKAKVVFLATKVPVYEQQK----NVFKH 54 usage_00365.pdb 1 NALICAPTGSGKTFVSILICEHHFQNM--PAGRKAKVVFLATKVPVYEQQK----NVFKH 54 usage_00366.pdb 1 NALICAPTGSGKTFVSILICEHHFQNM--PAGRKAKVVFLATKVPVYEQQK----NVFKH 54 usage_00400.pdb 1 NTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGKVVFFANQIPVYEQQK----SVFSK 54 usage_00482.pdb 1 -IIICLPTGSGKTRVAVYIAKDHLDKKKKA-SEPGKVIVLVNK---VLLVEQLFRKEFQP 55 usage_00638.pdb 1 -IIICLPTGCGKTRVAVYIAKDHLDKKKKA-SEPGKVIVLVNK---VLLVEQLFRKEFQP 55 usage_00695.pdb 1 -TIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGKVVFFANQIPVYEQNK----SVFSK 53 usage_00719.pdb 1 -TIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGKVVFFANQIPVYEQQK----SVFSK 53 IC PTG GKT V I H KV F usage_00103.pdb 55 YFERLGYNIASISG 68 usage_00351.pdb 55 YFERHGYRVTGIS- 67 usage_00362.pdb 55 HFERQGYSVQGISG 68 usage_00363.pdb 55 HFERQGYSVQGISG 68 usage_00365.pdb 55 HFERQGYSVQGIS- 67 usage_00366.pdb 55 HFERQGYSVQGIS- 67 usage_00400.pdb 55 YFERHGYRVTGISG 68 usage_00482.pdb 56 FLKK-WYRVIGLS- 67 usage_00638.pdb 56 FLKK-WYRVIGL-- 66 usage_00695.pdb 54 YFERHGYRVTGIS- 66 usage_00719.pdb 54 YFERHGYRVTGIS- 66 Y v g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################