################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:01 2021 # Report_file: c_1397_48.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00086.pdb # 2: usage_00229.pdb # 3: usage_00274.pdb # 4: usage_00295.pdb # 5: usage_00296.pdb # 6: usage_00297.pdb # 7: usage_00298.pdb # 8: usage_00367.pdb # 9: usage_00578.pdb # 10: usage_00595.pdb # 11: usage_00596.pdb # 12: usage_00613.pdb # 13: usage_00614.pdb # 14: usage_00734.pdb # 15: usage_00735.pdb # 16: usage_00736.pdb # 17: usage_00737.pdb # # Length: 52 # Identity: 16/ 52 ( 30.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 52 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 52 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 GQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFL- 51 usage_00229.pdb 1 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFL- 51 usage_00274.pdb 1 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFL- 51 usage_00295.pdb 1 -----------------------IIAILGMDELSEQDKLTVERARKIQRFL- 28 usage_00296.pdb 1 GQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFL- 51 usage_00297.pdb 1 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLS 52 usage_00298.pdb 1 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFL- 51 usage_00367.pdb 1 --EHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFL- 49 usage_00578.pdb 1 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFL- 51 usage_00595.pdb 1 --------------------LQDIIAILGMDELSDEDKLIVAR--------- 23 usage_00596.pdb 1 -EEHYRVARGVQQVLQRYNDLQDIIAILGMDELSDEDKLIVARARKIQRFL- 50 usage_00613.pdb 1 GEEHYRVARGVQQVLQRYNDLQDIIAILGMDELSDEDKLIVARARKIQRFL- 51 usage_00614.pdb 1 GEEHYRVARGVQQVLQRYNDLQDIIAILGMDELSDEDKLIVARARKIQRFL- 51 usage_00734.pdb 1 -----------------------IIAILGMDELSEQDKLTVERARKIQRFL- 28 usage_00735.pdb 1 GQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFL- 51 usage_00736.pdb 1 -----------------------IIAILGMDELSEQDKLTVERARKIQRFL- 28 usage_00737.pdb 1 GQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFL- 51 IIAILGMDELS DKL V R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################