################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:34 2021 # Report_file: c_1169_41.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00163.pdb # 2: usage_00233.pdb # 3: usage_00269.pdb # 4: usage_00343.pdb # 5: usage_00345.pdb # 6: usage_00539.pdb # 7: usage_00540.pdb # 8: usage_00680.pdb # 9: usage_00731.pdb # 10: usage_00734.pdb # 11: usage_00842.pdb # 12: usage_01001.pdb # 13: usage_01013.pdb # 14: usage_01014.pdb # 15: usage_01054.pdb # 16: usage_01055.pdb # 17: usage_01096.pdb # 18: usage_01098.pdb # 19: usage_01099.pdb # 20: usage_01107.pdb # 21: usage_01195.pdb # 22: usage_01197.pdb # 23: usage_01236.pdb # 24: usage_01241.pdb # 25: usage_01362.pdb # 26: usage_01363.pdb # 27: usage_01375.pdb # 28: usage_01376.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 28 ( 21.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 28 ( 64.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00233.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00269.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00343.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00345.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00539.pdb 1 GWI-PSSNNPN-----TGYGNHG-SCCA 21 usage_00540.pdb 1 ---EPASN--------SGLGGNG-SCCA 16 usage_00680.pdb 1 GYI-RLVKNVN-----YYIDSESIWVD- 21 usage_00731.pdb 1 GWE-PSSNNAN-----TGVGGHG-SCCS 21 usage_00734.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_00842.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01001.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01013.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01014.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01054.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01055.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01096.pdb 1 GWQ-PSSNNAN-----TGIGDHG-SCCA 21 usage_01098.pdb 1 GWQ-PSSNNAN-----TGIGDHG-SCCA 21 usage_01099.pdb 1 GWQ-PSSNNAN-----TGIGDHG-SCCA 21 usage_01107.pdb 1 GWQ-PSSNNAN-----TGIGDHG-SCCA 21 usage_01195.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01197.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01236.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01241.pdb 1 -----------GWQPSTGIGDHG-SCCA 16 usage_01362.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01363.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01375.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 usage_01376.pdb 1 GWE-PSSNNAN-----TGIGGHG-SCCS 21 g g g scc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################