################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:03 2021 # Report_file: c_0602_11.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00120.pdb # 2: usage_00121.pdb # 3: usage_00122.pdb # 4: usage_00123.pdb # 5: usage_00124.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00180.pdb # 9: usage_00181.pdb # 10: usage_00234.pdb # 11: usage_00235.pdb # 12: usage_00236.pdb # 13: usage_00320.pdb # 14: usage_00321.pdb # # Length: 56 # Identity: 30/ 56 ( 53.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 56 ( 53.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 56 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00121.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00122.pdb 1 GVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 56 usage_00123.pdb 1 -----------------ASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 39 usage_00124.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00178.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00179.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00180.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00181.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 usage_00234.pdb 1 -VVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMF 55 usage_00235.pdb 1 ---SLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMF 53 usage_00236.pdb 1 -VVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMF 55 usage_00320.pdb 1 -----------------ASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 39 usage_00321.pdb 1 -VASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMF 55 ASGVIPQISL G AGG VYSPA TDF MVDQTS MF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################