################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:39 2021 # Report_file: c_0209_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00230.pdb # 5: usage_00270.pdb # 6: usage_00274.pdb # 7: usage_00418.pdb # # Length: 110 # Identity: 65/110 ( 59.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/110 ( 73.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/110 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVD----SFMNWFQQKPGQPPKLLIYAISNRGS 54 usage_00013.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVD------MNWFQQKPGQPPKLLIYAISNRGS 52 usage_00014.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVDNYGFSFMNWFQQKPGQPPKLLIYAISNRGS 58 usage_00230.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVDYYGKSFMNWFQQKPGQPPKLLIYAASNQGS 58 usage_00270.pdb 1 -IVLTQSPSSLAVSLGQRATISCRASESVDSYGNSFMHWYQQKPGQPPKLLIYRASNLES 59 usage_00274.pdb 1 DIVLTQSPASLAVSLGQRATISCRASESVDSYGQSYMHWYQQKAGQPPKLLIYLASNLES 60 usage_00418.pdb 1 DIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWFQQKPGQPPRLLIHGASNVQS 60 VLTQSPaSLAVSLGQRATISCRASESVd M W QQKpGQPPkLLIy SN S usage_00012.pdb 55 GVPARFSGSGSGTDFSLNIHPVEEDDPAMYFCQQTKEVPWTFGGGTKLEI 104 usage_00013.pdb 53 GVPARFSGSGSGTDFSLNIHPVEEDDPAMYFCQQTEVPWTFGGGTKLEI- 101 usage_00014.pdb 59 GVPARFSGSGSGTDFSLNIHPVEEDDPAMYFCQQTKEVPWTFGGGTKLEI 108 usage_00230.pdb 59 GVPARFSGSGSGTDFSLHIHPMEEDDSAMYFCQQSKEVPWTFGGGTKLEI 108 usage_00270.pdb 60 GIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGTKLEI 109 usage_00274.pdb 61 GVPARFSGSGSRTDFTLTIDPVQAEDAATYYCQQNAEDSRTFGGGTKLEI 110 usage_00418.pdb 61 GVPARFSGSGSGTDFSLNIHPVEEDDFAMYFCQQSTKVPWTFGGGTKLEI 110 GvPARFSGSGS TDF L I Pve dD A Y CQQ tfGGgtkle #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################