################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:25 2021 # Report_file: c_0461_68.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00124.pdb # 2: usage_00177.pdb # 3: usage_00186.pdb # 4: usage_00508.pdb # 5: usage_00526.pdb # 6: usage_00527.pdb # 7: usage_00585.pdb # 8: usage_01073.pdb # 9: usage_01153.pdb # 10: usage_01154.pdb # # Length: 92 # Identity: 8/ 92 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 92 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 92 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00124.pdb 1 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRP-EEAA-EFQAEFVSTPELAAQSDF 58 usage_00177.pdb 1 LTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTPKP-----L--PYPFLSLEELLKEADV 52 usage_00186.pdb 1 QTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMK-GD-H-P-DFDYVSLEDLFKQSDV 55 usage_00508.pdb 1 KTLGILGMGGIGREVARRARAFGM-NIIYHNRNKLPPEL--ED-GAKYVSFDELLAQSDV 56 usage_00526.pdb 1 KTAGIIGTGKIGQILIKILRGFDM-KVIAYDLFPNQ-KVADEL-GFEYVSLDELYANSDI 57 usage_00527.pdb 1 KTAGIIGTGKIGQILIKILRGFDM-KVIAYDLFPNQ-KVADEL-GFEYVSLDELYANSDI 57 usage_00585.pdb 1 CTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIK-GI-E-D-YCTQVSLDEVLEKSDI 55 usage_01073.pdb 1 LTVGIIGAGRIGGTVARLFKALGA-TVIANDIVERV-EL-K-D-IVTYVSKEELLQAADV 55 usage_01153.pdb 1 -TAGVIGTGKIGVAMLRILKGFGM-RLLAFD--------------VEYVDLPTLFSESDV 44 usage_01154.pdb 1 KTAGVIGTGKIGVAMLRILKGFGM-RLLAFDPYPSA-AA-LEL-GVEYVDLPTLFSESDV 56 T G G G IG v l D usage_00124.pdb 59 IVVACSLTPATEGLCNKDFFQKKETAVFI-NI 89 usage_00177.pdb 53 VSLHTPLTPETHRLLNRERLFAMKRGAILLNT 84 usage_00186.pdb 56 IDLHVPGIEQNTHIINEAAFNLMKPGAIVINT 87 usage_00508.pdb 57 FSLNLALNASTRHIIGEKELAKMKDGVVIVNT 88 usage_00526.pdb 58 ISLNCPLTKDTKYMINRRSMLKMKDGVILVNT 89 usage_00527.pdb 58 ISLNCPLTKDTKYMINRRSMLKMKDGVILVNT 89 usage_00585.pdb 56 ITIHAPYIKENGAVVTRDFLKKMKDGAILVN- 86 usage_01073.pdb 56 VTLHVPLMDSTTQLIDADALALMKNDAVLINA 87 usage_01153.pdb 45 ISLHCPLTPENYHLLNEAAFDQMKNGVMIVNT 76 usage_01154.pdb 57 ISLHCPLTPENYHLLNEAAFDQMKNGVMIVNT 88 mk N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################