################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:36 2021 # Report_file: c_1315_88.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00089.pdb # 2: usage_00137.pdb # 3: usage_00316.pdb # 4: usage_00317.pdb # 5: usage_00489.pdb # # Length: 60 # Identity: 6/ 60 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 60 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 60 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 -LKLFLETAEKHFMVG--HRVHYYVFTDQPAAVPRVTLGT---------GRQLSVLEVR- 47 usage_00137.pdb 1 -LKLFLETAEKHFMVG--HRVHYYVFTDQPAAVPRVTLGT---------GRQLSVLEVR- 47 usage_00316.pdb 1 ----FLTSANKHFMVG--HPVIFYIMVDDVSRMPLIELGP---------LRSFKVFKIK- 44 usage_00317.pdb 1 YLEEFLTSANKHFMVG--HPVIFYIMVDDVSRMPLIELGP---------LRSFKVFKIKP 49 usage_00489.pdb 1 ---DFYLSAERYFMQDQSFIIEYYVFTDSP----------KLYDEENNKHIHRIK----- 42 Fl A khFMvg h v Y D r v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################