################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:32 2021 # Report_file: c_0004_40.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00107.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # # Length: 298 # Identity: 208/298 ( 69.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 208/298 ( 69.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 90/298 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 TFHTWSQNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNLLSNSVLCSL 60 usage_00109.pdb 1 TFHTWSQNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNLLSNSVLCSL 60 usage_00110.pdb 1 ---------------------------------------------VAIYNLLSNSVLCSL 15 VAIYNLLSNSVLCSL usage_00107.pdb 61 KDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFV 120 usage_00109.pdb 61 KDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFV 120 usage_00110.pdb 16 KDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFV 75 KDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFV usage_00107.pdb 121 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDQLVRKFNQYE 180 usage_00109.pdb 121 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDQLVRKFNQYE 180 usage_00110.pdb 76 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDQLVRKFNQYE 135 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDQLVRKFNQYE usage_00107.pdb 181 GFCSNTINQIYRSSKGQWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN 240 usage_00109.pdb 181 GFCSNTINQIYRSSKGQWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN 240 usage_00110.pdb 136 GFCSNTINQIYRSSKGQWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN 195 GFCSNTINQIYRSSKGQWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN usage_00107.pdb 241 IWASTNTGISCYI--------------------------------------------- 253 usage_00109.pdb 241 IWASTNTGISCYI--------------------------------------------- 253 usage_00110.pdb 196 IWASTNTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGLCFFN 253 IWASTNTGISCYI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################