################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:32:54 2021 # Report_file: c_1222_79.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00041.pdb # 2: usage_00106.pdb # 3: usage_00107.pdb # 4: usage_00108.pdb # 5: usage_00109.pdb # 6: usage_00436.pdb # 7: usage_00437.pdb # 8: usage_00438.pdb # 9: usage_00631.pdb # 10: usage_00812.pdb # 11: usage_00813.pdb # 12: usage_00814.pdb # 13: usage_00815.pdb # 14: usage_00816.pdb # 15: usage_00817.pdb # 16: usage_00818.pdb # 17: usage_00819.pdb # 18: usage_00978.pdb # 19: usage_00997.pdb # 20: usage_00999.pdb # 21: usage_01156.pdb # 22: usage_01613.pdb # 23: usage_01993.pdb # 24: usage_02017.pdb # 25: usage_02018.pdb # 26: usage_02019.pdb # 27: usage_02020.pdb # 28: usage_02021.pdb # 29: usage_02022.pdb # 30: usage_02023.pdb # 31: usage_02024.pdb # 32: usage_02102.pdb # 33: usage_02180.pdb # 34: usage_02188.pdb # 35: usage_02289.pdb # 36: usage_02329.pdb # # Length: 51 # Identity: 7/ 51 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 51 ( 39.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 51 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 TFGRSFTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 44 usage_00106.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00107.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00108.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00109.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00436.pdb 1 TFGRSFTLAS---SKTDV-GAPVSGPGVPGRFTKEKGILAYYEICDFL--- 44 usage_00437.pdb 1 TFGRSFTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 44 usage_00438.pdb 1 TFGRSFTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 44 usage_00631.pdb 1 TFGRSFTLAS---SKTDV-GAPVSGPGVPGRFTKEKGILAYYEICDFL--- 44 usage_00812.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00813.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00814.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00815.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00816.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00817.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00818.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00819.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_00978.pdb 1 AYGHTFILSD--PSKTGI-GAPTISTGPPGKYTDESGLLAYYEVCTFLNEG 48 usage_00997.pdb 1 TYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKL--- 48 usage_00999.pdb 1 TFGRSYTLAS---SKTDV-GAPISGPGIPGRFTKWKGILAYYEICDF---- 43 usage_01156.pdb 1 TYGHNFILSN--PSNTGI-GAPTSGAGPAGPYAKESGIWAYYEICTFLKN- 47 usage_01613.pdb 1 --GRSYTLAS---SKTDV-GAPISGPGIPGRFTKWKGILAYYEICDFL--- 42 usage_01993.pdb 1 TFGRSFTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 44 usage_02017.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFLR-- 45 usage_02018.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFLR-- 45 usage_02019.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFLR-- 45 usage_02020.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFLR-- 45 usage_02021.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_02022.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_02023.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_02024.pdb 1 TFGRSFTLAS---SETGV-GAPISGPGIPGRFTKEAGTLAYYEICDFL--- 44 usage_02102.pdb 1 --GRSYTLAS---SSTRV-GAPISGPGIPGQFTKEKGILAYYEICDFL--- 42 usage_02180.pdb 1 --GRSYTLAS---SKTDV-GAPISGPGIPGRFTKWKGILAYYEICDFL--- 42 usage_02188.pdb 1 TFGRSYTLAS---SKTDV-GAPISGPGIPGRFTKWKGILAYYEICDFL--- 44 usage_02289.pdb 1 --GRSFTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 42 usage_02329.pdb 1 --GKSYTLAS---SKTDV-GAPISGPGIPGRFTKEKGILAYYEICDFL--- 42 G L s t gap sg g G G laYyEiC f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################