################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:31 2021 # Report_file: c_0459_6.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00018.pdb # 2: usage_00023.pdb # 3: usage_00024.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00032.pdb # 7: usage_00089.pdb # 8: usage_00195.pdb # 9: usage_00212.pdb # 10: usage_00217.pdb # 11: usage_00257.pdb # # Length: 90 # Identity: 7/ 90 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 90 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 90 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -LVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVNDCQDVASECEVKCMPTFQF 58 usage_00023.pdb 1 --ILVDFWAEWCGACKMIAAILDEIADEYQGKLTVAKLNIDQNAGTAAKYGIRGIATLLL 58 usage_00024.pdb 1 GAILVDFWAEWCGACKMIAAILDEIADEYQGKLTVAKLNIDQNAGTAAKYGIRGIATLLL 60 usage_00026.pdb 1 GAILVDFWAEWCGACKMIAAILDEIADEYQGKLTVAKLNIDQNAGTAAKYGIRGI-TLLL 59 usage_00027.pdb 1 GAILVDFWAEWCGACKMIAAILDEIADEYQGKLTVAKLNIDQNAGTAAKYGIRGI-TLLL 59 usage_00032.pdb 1 --VMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLF 58 usage_00089.pdb 1 --AIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTIWF 58 usage_00195.pdb 1 KPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 60 usage_00212.pdb 1 -PVMVLFRKDNDEEAKKVEYIVRELAQEFDGLIMVFELDTNKAPEIAKKYNITTTPTVAF 59 usage_00217.pdb 1 -LVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLF 58 usage_00257.pdb 1 --AIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWF 58 vdF a wcg K e A T usage_00018.pdb 59 FKKGQKVGEFSGANK--EKLEATINEL--- 83 usage_00023.pdb 59 FKNGEVAATKVGALSKGQ-LKEFLDAN--- 84 usage_00024.pdb 61 FKNGEVAATKVGALSKGQ-LKEFLDAN--- 86 usage_00026.pdb 60 FKNGEVAATKVGALSKGQ-LKEFLDA---- 84 usage_00027.pdb 60 FKNGEVAATKVGALSKGQ-LKEFLDA---- 84 usage_00032.pdb 59 FKNGERKESIIGAVPKST-LTDSIEKY--- 84 usage_00089.pdb 59 VPMKGEPQVNMGALSKEQ-LKGYIDKVLLK 87 usage_00195.pdb 61 FKDGQPVKRIVGAKGKAA-LLRELS----- 84 usage_00212.pdb 60 FKNGEDKSVLIGAIPKDQ-LRDEILKYL-G 87 usage_00217.pdb 59 MKNGQKLDSLSGANY--DKLLELVEKN--- 83 usage_00257.pdb 59 VPMKGEPQVNMGALSKEQ-LKGYIDKVLLK 87 GA L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################