################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:17 2021 # Report_file: c_0545_76.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00060.pdb # 2: usage_00409.pdb # 3: usage_00456.pdb # 4: usage_00782.pdb # 5: usage_00783.pdb # 6: usage_00784.pdb # # Length: 167 # Identity: 12/167 ( 7.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/167 ( 7.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 68/167 ( 40.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 -----------------------------VEPLFQHFETLTKNWTERPENLMDQYSEINA 31 usage_00409.pdb 1 IYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLS---------YFSLMFDRS 51 usage_00456.pdb 1 IYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLS---------YFSLMFDRS 51 usage_00782.pdb 1 -----------------------------VEPLFQHFETLTKNWTERPENLMDQYSEINA 31 usage_00783.pdb 1 -----------------------------VEPLFQHFETLTKNWTERPENLMDQYSEINA 31 usage_00784.pdb 1 -----------------------------VEPLFQHFETLTKNWTERPENLMDQYSEINA 31 Q usage_00060.pdb 32 ISTACSNGLPQCENLAKTLFDQWMSDP---ENNP-I--HPNLRSTIYCNAIAQGGQDQWD 85 usage_00409.pdb 52 EVYGPM--KKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCEN 109 usage_00456.pdb 52 EVYGPM--KKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCEN 109 usage_00782.pdb 32 ISTACSNGLPQCENLAKTLFDQWMSDP---ENNP-I--HPNLRSTIYCNAIAQGGQDQWD 85 usage_00783.pdb 32 ISTACSNGLPQCENLAKTLFDQWMSDP---ENNP-I--HPNLRSTIYCNAIAQGGQDQWD 85 usage_00784.pdb 32 ISTACSNGLPQCENLAKTLFDQWMSDP---ENNP-I--HPNLRSTIYCNAIAQGGQDQWD 85 LF P A G usage_00060.pdb 86 FAWGQLQQAQLVNE---------ADKLRSALACSNEVWLLNRYLGYT 123 usage_00409.pdb 110 LAKTLFDQW-----MSDPENNPIHPNLRSTIYC--NAIAQG------ 143 usage_00456.pdb 110 LAKTLFDQW-----MSDPENNPIHPNLRSTIYC--NAIAQG------ 143 usage_00782.pdb 86 FAWGQLQQAQLVNE---------ADKLRSALACSNEVWLLNRYLGYT 123 usage_00783.pdb 86 FAWGQLQQAQLVNE---------ADKLRSALACSNEVWLLNRYLGYT 123 usage_00784.pdb 86 FAWGQLQQAQLVNE---------ADKLRSALACSNEVWLLNRYLGYT 123 A Q LRS C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################