################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:27 2021 # Report_file: c_1434_112.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_01074.pdb # 2: usage_02033.pdb # 3: usage_02034.pdb # 4: usage_02036.pdb # 5: usage_02037.pdb # 6: usage_02262.pdb # 7: usage_02601.pdb # 8: usage_03083.pdb # 9: usage_03257.pdb # 10: usage_03291.pdb # # Length: 111 # Identity: 6/111 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/111 ( 15.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/111 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01074.pdb 1 EEELAERFSHFGNALGTAYQIVDDILEFLE-V-----------VEG--ETLPHIYKSTSK 46 usage_02033.pdb 1 KEEEVAKLRKFANCIGLLFQVVDDILDVTK-----------------KTTYPKLI----- 38 usage_02034.pdb 1 KEEEVAKLRKFANCIGLLFQVVDDILDVTK-----------------KTTYPKLI----- 38 usage_02036.pdb 1 KEEEVAKLRKFANCIGLLFQVVDDILDVTK-----------------KTTYPKLI----- 38 usage_02037.pdb 1 -EEEVAKLRKFANCIGLLFQVVDDILDVTK-----------------KTTYPKLI----- 37 usage_02262.pdb 1 SDDEIERLRKFARCIGLLFQVVDDILDVTKL-IAD------------KLTYPKIM----- 42 usage_02601.pdb 1 -EEEVAKLRKFANCIGLLFQVVDDILDVTK-SSKELGKTAGKDLVADKTTYPKLI----- 53 usage_03083.pdb 1 -------VKKLGEKFGVAFQIYDDLKDVLG-S---------------KVTLVKKM----- 32 usage_03257.pdb 1 --NLLATFLEIGMIIGLAFQVRDDILDITA-----------------KMTYPHLL----- 36 usage_03291.pdb 1 SDEEIERLRKFARCIGLLFQVVDDILDVTK-----------------KLTYPKL------ 37 G fQ DDild T p usage_01074.pdb 47 EEALKKSIDCVKLHVAAAKETLETFR----ECP-ARDKLFQITDYITVDLE 92 usage_02033.pdb 39 --GVEKSKEFADRLNREAQEQLLHFH----PH--RAAPLIALANYIAY--- 78 usage_02034.pdb 39 --GVEKSKEFADRLNREAQEQLLHFH----PH--RAAPLIALANYIAY--- 78 usage_02036.pdb 39 --GVEKSKEFADRLNREAQEQLLHFH----PH--RAAPLIALANYIAYR-- 79 usage_02037.pdb 38 --GVEKSKEFADRLNREAQEQLLHFH----PH--RAAPLIALANYIAY--- 77 usage_02262.pdb 43 --GLEKSREFAEKLNREARDQLLGFD----SD--KVAPLLALANYIA---- 81 usage_02601.pdb 54 --GVEKSKEFADRLNREAQEQLLHFH----PH--RAAPLIALANYIA---- 92 usage_03083.pdb 33 --GVQKAKQLADKYYEEVLEALESEGL---HR--TFDFLRNLKKM------ 70 usage_03257.pdb 37 --GLNESYQILDESLDQAEAILRKLS-DEIA--FAPQKILSLIER------ 76 usage_03291.pdb 38 --GLEKSREFAEKLNTEARDQLLGFD----SD--KVAPLLALANYIANR-- 78 g ks a L l l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################