################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:50 2021 # Report_file: c_1033_46.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00015.pdb # 2: usage_00531.pdb # 3: usage_00978.pdb # 4: usage_00984.pdb # # Length: 82 # Identity: 11/ 82 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 82 ( 43.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 82 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 PILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCP--------------------VDVC 40 usage_00531.pdb 1 PFVILGNKIDAP-NAV----SEAELRSALG---LLNTTGI-----------EGQRPVEVF 41 usage_00978.pdb 1 PILILGNKIDRP-EAI----SEERLREMFG---LYGQ---TTGKGSVSLKELNARPLEVF 49 usage_00984.pdb 1 PILILGNKIDRP-EAI----SEERLREMFG---LYGQ---TTGKGSVSLKELNARPLEVF 49 PililGNKiD p a se lR m g L eVf usage_00015.pdb 41 LVSAAKGIGMAKVMEAINRYRE 62 usage_00531.pdb 42 MCSVVMRNGYLEAFQWLSQYI- 62 usage_00978.pdb 50 MCSVLKRQGYGEGFRWMAQYI- 70 usage_00984.pdb 50 MCSVLKRQGYGEGFRWMAQYI- 70 mcSv kr Gy e f w qYi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################