################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:01 2021 # Report_file: c_0674_43.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00034.pdb # 2: usage_00043.pdb # 3: usage_00049.pdb # 4: usage_00143.pdb # 5: usage_00144.pdb # 6: usage_00207.pdb # 7: usage_00208.pdb # 8: usage_00209.pdb # 9: usage_00224.pdb # # Length: 65 # Identity: 8/ 65 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 65 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 65 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 GKTYFFVAHECWRYD-EYKQSMDTGYPKMIAEEFPGIGNKVDAVFQK--DGFLYFFHGTR 57 usage_00043.pdb 1 --TYIFAGDKFWRYN-EVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAY 57 usage_00049.pdb 1 -KTYIFAGDKFWRYN-EVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAY 58 usage_00143.pdb 1 --TYFFVANKYWRYD-EYKRSMDPGYPKMIAHDFPGIGHKVDAVFMK--DGFFYFFHGTR 55 usage_00144.pdb 1 GKTYFFVANKYWRYD-EYKRSMDPGYPKMIAHDFPGIGHKVDAVFMK--DGFFYFFHGTR 57 usage_00207.pdb 1 GKTLLFSGNQVWRYD-DTNHIMDKDYPRLIEEDFPGIGDKVDAVYEK--NGYIYFFNGPI 57 usage_00208.pdb 1 GKTLLFSGNQVWRYD-DTNHIMDKDYPRLIEEDFPGIGDKVDAVYEK--NGYIYFFNGPI 57 usage_00209.pdb 1 GKTLLFSGNQVWRYD-DTNHIMDKDYPRLIEEDFPGIGDKVDAVYEK--NGYIYFFNGPI 57 usage_00224.pdb 1 GATYVFSGSHYWRLDTNRD----GWHSWPIAHQWPQGPSTVDAAFSW--EDKLYLIQDTK 54 T F WRy p I i DAv g Yff g usage_00034.pdb 58 QYQFD 62 usage_00043.pdb 58 YLKLE 62 usage_00049.pdb 59 YLKLE 63 usage_00143.pdb 56 QYK-- 58 usage_00144.pdb 58 QYK-- 60 usage_00207.pdb 58 QFEYS 62 usage_00208.pdb 58 QFEYS 62 usage_00209.pdb 58 QFEYS 62 usage_00224.pdb 55 VYVFL 59 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################