################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:19:30 2021 # Report_file: c_0626_4.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00001.pdb # 2: usage_00052.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00071.pdb # 9: usage_00072.pdb # 10: usage_00073.pdb # 11: usage_00074.pdb # 12: usage_00075.pdb # 13: usage_00077.pdb # 14: usage_00078.pdb # 15: usage_00079.pdb # 16: usage_00118.pdb # 17: usage_00119.pdb # 18: usage_00122.pdb # 19: usage_00123.pdb # 20: usage_00124.pdb # 21: usage_00125.pdb # 22: usage_00126.pdb # 23: usage_00127.pdb # 24: usage_00128.pdb # 25: usage_00129.pdb # 26: usage_00130.pdb # # Length: 107 # Identity: 27/107 ( 25.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/107 ( 37.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/107 ( 16.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 VLPEAVTQVAAQVIGNDAAITVGGLSGAFELNVYIPVMARNLLESFTLLANVSRLFVDKC 60 usage_00052.pdb 1 TQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHL 60 usage_00065.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00066.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00067.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00068.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00069.pdb 1 TQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENC 60 usage_00071.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00072.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00073.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00074.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00075.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00077.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00078.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00079.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00118.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00119.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00122.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00123.pdb 1 VLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 60 usage_00124.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00125.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00126.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00127.pdb 1 -LPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRC 59 usage_00128.pdb 1 TQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENC 60 usage_00129.pdb 1 VLPEAVTQVAAQVIGNDAAVAWGGANGAFELNVYIPMMARNILESFTLLTNVSKLFAQRC 60 usage_00130.pdb 1 VLPEAVTQVACQVVGNDAAIAFGGASGAFELNVYIPMMARNLLESFTLLSNVSRLFAERC 60 EA T Va qV GN a gG G FeLNV P M n L S LL s F c usage_00001.pdb 61 VDGLVANEDHLRTLAESSPSIVTPLNSAIGYEEAAAVAKEAL-KER- 105 usage_00052.pdb 61 AQGIEPNLERIEEYLQKNPMLATALNKAIGYDKAAEIVKK------- 100 usage_00065.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-KER- 104 usage_00066.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 102 usage_00067.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 102 usage_00068.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 102 usage_00069.pdb 61 VVGIQANTERINKLMNESLMLVTALNPHIG----------------- 90 usage_00071.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00072.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-KER- 105 usage_00073.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-KER- 105 usage_00074.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-KER- 105 usage_00075.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-KER- 105 usage_00077.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00078.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00079.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00118.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00119.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00122.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 103 usage_00123.pdb 61 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K-ER 105 usage_00124.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K--- 102 usage_00125.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQAL-K-E- 103 usage_00126.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIG----------------- 89 usage_00127.pdb 60 IAGLTANVEHLRRLAESSPSIVTPLNSAIG----------------- 89 usage_00128.pdb 61 VVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKN--- 104 usage_00129.pdb 61 IAGLTANAEHLRELAESSPSIVTPLNSAIGYEEAAAVAKQAL-K-ER 105 usage_00130.pdb 61 IDGLVANEERLRELAESSPSIVTPLNSAIGYEEAAKVAKQAL-AEK- 105 G aN e l s vT LN IG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################