################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:29 2021 # Report_file: c_1111_28.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00030.pdb # 2: usage_00106.pdb # 3: usage_00178.pdb # 4: usage_00235.pdb # 5: usage_00238.pdb # 6: usage_00303.pdb # 7: usage_00305.pdb # 8: usage_00307.pdb # 9: usage_00309.pdb # 10: usage_00328.pdb # 11: usage_00342.pdb # 12: usage_00438.pdb # 13: usage_00465.pdb # 14: usage_00484.pdb # 15: usage_00562.pdb # 16: usage_00623.pdb # # Length: 71 # Identity: 50/ 71 ( 70.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 71 ( 84.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 71 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVA---T-LGEMADCCAKQE 56 usage_00106.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00178.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00235.pdb 1 -EDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 59 usage_00238.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00303.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00305.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00307.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00309.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00328.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00342.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00438.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00465.pdb 1 -EDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 59 usage_00484.pdb 1 FEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 60 usage_00562.pdb 1 -EDHVKLAKEVTEFAKACAAEESGANCDKSLHTLFGDKLCTVA---------ADCCEKQE 50 usage_00623.pdb 1 -EDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQE 59 EDHVKLvnEVTEFAKtCvAdESaeNCDKSLHTLFGDKLCTVA ADCCaKQE usage_00030.pdb 57 PERNECFLQHK 67 usage_00106.pdb 61 PERNECFLQHK 71 usage_00178.pdb 61 PERNECFLQHK 71 usage_00235.pdb 60 PERNECFLQHK 70 usage_00238.pdb 61 PERNECFLQHK 71 usage_00303.pdb 61 PERNECFLQHK 71 usage_00305.pdb 61 PERNECFLQHK 71 usage_00307.pdb 61 PERNECFLQHK 71 usage_00309.pdb 61 PERNECFLQHK 71 usage_00328.pdb 61 PERNECFLQHK 71 usage_00342.pdb 61 PERNECFLQHK 71 usage_00438.pdb 61 PERNECFLQH- 70 usage_00465.pdb 60 PERNECFLQHK 70 usage_00484.pdb 61 PERNECFLQH- 70 usage_00562.pdb 51 PDRNECFLAHK 61 usage_00623.pdb 60 PERNECFLQH- 69 PeRNECFLqH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################