################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:19:14 2021 # Report_file: c_0072_4.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00025.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # 8: usage_00031.pdb # 9: usage_00032.pdb # 10: usage_00033.pdb # 11: usage_00034.pdb # 12: usage_00035.pdb # 13: usage_00036.pdb # 14: usage_00056.pdb # 15: usage_00057.pdb # # Length: 185 # Identity: 137/185 ( 74.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 170/185 ( 91.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/185 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00018.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00025.pdb 1 ---------ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 51 usage_00027.pdb 1 ---------ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 51 usage_00028.pdb 1 LPLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 60 usage_00029.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00030.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00031.pdb 1 ---------ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 51 usage_00032.pdb 1 ---------ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 51 usage_00033.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00034.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00035.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00036.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00056.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 usage_00057.pdb 1 -PLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG 59 ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG usage_00017.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00018.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00025.pdb 52 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 110 usage_00027.pdb 52 CDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 111 usage_00028.pdb 61 CDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 120 usage_00029.pdb 60 CDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 119 usage_00030.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00031.pdb 52 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 110 usage_00032.pdb 52 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 110 usage_00033.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00034.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00035.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00036.pdb 60 CDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 119 usage_00056.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 usage_00057.pdb 60 -DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS 118 DPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHS usage_00017.pdb 119 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00018.pdb 119 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00025.pdb 111 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 167 usage_00027.pdb 112 HHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 170 usage_00028.pdb 121 HHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 179 usage_00029.pdb 120 HHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 178 usage_00030.pdb 119 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00031.pdb 111 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 167 usage_00032.pdb 111 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 167 usage_00033.pdb 119 HHLYKNKTY-VKGGMPSGFSGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 176 usage_00034.pdb 119 HHLYKNKTY-VKGGMPAG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00035.pdb 119 HHLYKNKTY-VKGGMPSA-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00036.pdb 120 HHLYKNKTY-VKGGMPSAISGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 177 usage_00056.pdb 119 HHLYKNKTY-VKGGMPSG-SGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAY-GDDV 175 usage_00057.pdb 119 HHLYKNKTY-VKGGMPSA-FSGTSIFNSMINNLIIRTLLLKTYKGIDLDHLKMIAYGDDV 176 HHLYKNKTY VKGGMPs sgtsifnsminNliIrtlLLktykgidldhlkmiay GDDV usage_00017.pdb 176 IASY- 179 usage_00018.pdb 176 IASYP 180 usage_00025.pdb 168 IASY- 171 usage_00027.pdb 171 IASYP 175 usage_00028.pdb 180 IASYP 184 usage_00029.pdb 179 IASY- 182 usage_00030.pdb 176 IASYP 180 usage_00031.pdb 168 IASYP 172 usage_00032.pdb 168 IASYP 172 usage_00033.pdb 177 IASY- 180 usage_00034.pdb 176 IASYP 180 usage_00035.pdb 176 IASY- 179 usage_00036.pdb 178 IASYP 182 usage_00056.pdb 176 IASYP 180 usage_00057.pdb 177 IASYP 181 IASY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################