################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:54:33 2021 # Report_file: c_0542_6.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00071.pdb # 8: usage_00072.pdb # 9: usage_00173.pdb # 10: usage_00174.pdb # 11: usage_00175.pdb # 12: usage_00176.pdb # 13: usage_00182.pdb # 14: usage_00183.pdb # 15: usage_00184.pdb # 16: usage_00185.pdb # 17: usage_00186.pdb # 18: usage_00187.pdb # 19: usage_00214.pdb # 20: usage_00215.pdb # 21: usage_00217.pdb # 22: usage_00218.pdb # 23: usage_00219.pdb # 24: usage_00220.pdb # 25: usage_00244.pdb # 26: usage_00245.pdb # 27: usage_00246.pdb # 28: usage_00247.pdb # 29: usage_00248.pdb # # Length: 231 # Identity: 165/231 ( 71.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 165/231 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/231 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00002.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00035.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00036.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00069.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00070.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00071.pdb 1 --MQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 58 usage_00072.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00173.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00174.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00175.pdb 1 --MQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 58 usage_00176.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00182.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00183.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00184.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00185.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00186.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00187.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00214.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00215.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00217.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00218.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00219.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00220.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00244.pdb 1 --MQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 58 usage_00245.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00246.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 usage_00247.pdb 1 --MQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 58 usage_00248.pdb 1 MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES 60 MQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAES usage_00001.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00002.pdb 61 LLSL--------DD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 111 usage_00035.pdb 61 LLSLSPNNNGEEDD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 119 usage_00036.pdb 61 LLSLSPNNNGEEDD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 119 usage_00069.pdb 61 LLSLSPNNNGEEDD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 119 usage_00070.pdb 61 LLSLS------EDD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 113 usage_00071.pdb 59 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 107 usage_00072.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00173.pdb 61 LL-----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 108 usage_00174.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00175.pdb 59 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 107 usage_00176.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00182.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00183.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00184.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00185.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00186.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00187.pdb 61 LLSL--------DD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 111 usage_00214.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00215.pdb 61 LLSL--------DD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 111 usage_00217.pdb 61 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 110 usage_00218.pdb 61 LLSL--------DD-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 111 usage_00219.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00220.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00244.pdb 59 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 107 usage_00245.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00246.pdb 61 LLS----------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 109 usage_00247.pdb 59 LLSL---------D-GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 108 usage_00248.pdb 61 LLSL---------DDGARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY 111 LL D GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWY usage_00001.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTS- 169 usage_00002.pdb 112 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 171 usage_00035.pdb 120 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 179 usage_00036.pdb 120 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 179 usage_00069.pdb 120 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 179 usage_00070.pdb 114 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 173 usage_00071.pdb 108 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 167 usage_00072.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00173.pdb 109 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTS- 167 usage_00174.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTS- 168 usage_00175.pdb 108 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 167 usage_00176.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00182.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00183.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00184.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00185.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00186.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00187.pdb 112 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 171 usage_00214.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00215.pdb 112 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 171 usage_00217.pdb 111 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 170 usage_00218.pdb 112 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 171 usage_00219.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00220.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00244.pdb 108 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 167 usage_00245.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00246.pdb 110 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 169 usage_00247.pdb 109 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 168 usage_00248.pdb 112 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSM 171 RHPDVTVQCAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTS usage_00001.pdb --------------------------------------------------- usage_00002.pdb 172 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 222 usage_00035.pdb 180 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 230 usage_00036.pdb 180 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 208 usage_00069.pdb 180 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 230 usage_00070.pdb 174 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 202 usage_00071.pdb 168 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTA---------------- 202 usage_00072.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTA---------------- 204 usage_00173.pdb --------------------------------------------------- usage_00174.pdb --------------------------------------------------- usage_00175.pdb 168 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTA---------------- 202 usage_00176.pdb 170 FDSNKLDPDVSQP-TD-FAEFTLSNYKRIVKYKTA---------------- 202 usage_00182.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 198 usage_00183.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 221 usage_00184.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 199 usage_00185.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYL----------- 210 usage_00186.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 221 usage_00187.pdb 172 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 222 usage_00214.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYL----------- 210 usage_00215.pdb 172 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 200 usage_00217.pdb 171 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 199 usage_00218.pdb 172 FDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSE 222 usage_00219.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 198 usage_00220.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 198 usage_00244.pdb 168 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 196 usage_00245.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 198 usage_00246.pdb 170 FDSNKLDPDVSQPTTTDFAEFTLSNYKRI---------------------- 198 usage_00247.pdb 169 FD------------------------------------------------- 170 usage_00248.pdb 172 FD------------------------------------------------- 173 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################