################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:28 2021 # Report_file: c_1132_20.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00280.pdb # 2: usage_00281.pdb # 3: usage_00282.pdb # 4: usage_00283.pdb # 5: usage_00412.pdb # 6: usage_00413.pdb # 7: usage_00533.pdb # 8: usage_00604.pdb # 9: usage_00605.pdb # 10: usage_00606.pdb # 11: usage_00732.pdb # # Length: 82 # Identity: 43/ 82 ( 52.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 82 ( 52.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 82 ( 47.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00280.pdb 1 -----HAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 51 usage_00281.pdb 1 ENENEHAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 56 usage_00282.pdb 1 ----EHAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 52 usage_00283.pdb 1 ----EHAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 52 usage_00412.pdb 1 --------------------------------------MKPVYEKRDAYIDEIAEFWKIV 22 usage_00413.pdb 1 ------AKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 50 usage_00533.pdb 1 ------------LAKCEE----EVDAIEREVELYRLNK-KPVYEKRDAYIDEIAEFWKIV 43 usage_00604.pdb 1 -----------------------VDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 37 usage_00605.pdb 1 ----EHAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 52 usage_00606.pdb 1 ---NEHAKAFLGLAKCEE----EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 53 usage_00732.pdb 1 ------ENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIV 54 KPVYEKRDAYIDEIAEFWKIV usage_00280.pdb 52 LSQHVSFANYIRASDFKYIDTI 73 usage_00281.pdb 57 LSQHVSFANYIRASDFKYIDTI 78 usage_00282.pdb 53 LSQHVSFANYIRASDFKYIDTI 74 usage_00283.pdb 53 LSQHVSFANYIRASDFKYIDTI 74 usage_00412.pdb 23 LSQHVSFANYIRASDFKYIDTI 44 usage_00413.pdb 51 LSQHVSFANYIRASDFKYIDTI 72 usage_00533.pdb 44 LSQHVSFANYIRASDFKYIDTI 65 usage_00604.pdb 38 LSQHVSFANYIRASDFKYIDTI 59 usage_00605.pdb 53 LSQHVSFANYIRASDFKYIDTI 74 usage_00606.pdb 54 LSQHVSFANYIRASDFKYIDTI 75 usage_00732.pdb 55 LSQHVSFANYIRASDFKYIDTI 76 LSQHVSFANYIRASDFKYIDTI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################