################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:57 2021 # Report_file: c_0985_24.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00579.pdb # 2: usage_00580.pdb # 3: usage_00581.pdb # 4: usage_00583.pdb # 5: usage_00616.pdb # 6: usage_00831.pdb # 7: usage_00859.pdb # 8: usage_00861.pdb # 9: usage_00863.pdb # 10: usage_00864.pdb # # Length: 77 # Identity: 16/ 77 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 77 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 77 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00579.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00580.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00581.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00583.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00616.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00831.pdb 1 DKKLKFEVAVKKDGTILGIRGTLIANLGAP-YPDANDDESGNVKS--------TVRMLPG 51 usage_00859.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00861.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00863.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 usage_00864.pdb 1 DYHMTTELAATKDGKILAMRCHVLADHGAFDACA-----------DPSKWPAGFMNICTG 49 DyhmttElAatKDGkILamRchvlAdhGAf aca fmnictG usage_00579.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00580.pdb 50 SYDMPVAHLAVDGVYTN 66 usage_00581.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00583.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00616.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00831.pdb 52 IYKIIGADIDAYAVHTN 68 usage_00859.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00861.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00863.pdb 50 SYDMPVAHLAVDGVY-- 64 usage_00864.pdb 50 SYDMPVAHLAVDGVY-- 64 sYdmpvAhlavdgVy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################