################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:03 2021 # Report_file: c_1477_148.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00579.pdb # 2: usage_00580.pdb # 3: usage_00919.pdb # 4: usage_01004.pdb # # Length: 62 # Identity: 1/ 62 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 62 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 62 ( 67.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00579.pdb 1 GNKEKADQQKAVTDIVALE----------------NALDMYKLDNSVYPT----TDQGLE 40 usage_00580.pdb 1 --KEKADQQKAVTDIVALE----------------NALDMYKLDNSVYPT----TDQGLE 38 usage_00919.pdb 1 ---------QEASLPYAYNQEATRKNEIKWWSGSYDTYDAYLRAG--------------- 36 usage_01004.pdb 1 ------NPKVASDLHALSQ----------------PLTDLSTRCSLPISGLQAI------ 32 a a D y usage_00579.pdb 41 AL 42 usage_00580.pdb 39 AL 40 usage_00919.pdb -- usage_01004.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################