################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:57 2021 # Report_file: c_0832_98.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00021.pdb # 2: usage_00336.pdb # 3: usage_00337.pdb # 4: usage_00462.pdb # 5: usage_00559.pdb # # Length: 81 # Identity: 8/ 81 ( 9.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 81 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 81 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -YEALSHAVDYLHVT-YDHHYRT-S-APGPIAPYP-------------WIKQVLTYIQGQ 43 usage_00336.pdb 1 DIAKISQHLDFISIMTYDFHGAW-RGTTGHHSPLFRGQEDASP-DRFSNTDYAVGYMLRL 58 usage_00337.pdb 1 -VDKIAQNLDFVNLMAYDFHGSW-EKVTGHNSPLYKRQE-QSGAAASLNVDAAVQQWLQK 57 usage_00462.pdb 1 -VDKIAQNLDFVNLMAYDFHGSW-EKVTGHNSPLYKR-------AASLNVDAAVQQWLQK 51 usage_00559.pdb 1 PVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG------PSGDAGTRSWIQA 54 lD m YDfhg tG pl d usage_00021.pdb 44 GVDSKV----LGIPYYGRDWV 60 usage_00336.pdb 59 GAPA--SKLVMGIPTFGRSFT 77 usage_00337.pdb 58 GTPA--SKLILGMPTYGRSFT 76 usage_00462.pdb 52 GTPA--SKLILGMPTYGRSFT 70 usage_00559.pdb 55 GLPA--KKAVLGFPYYGYAWR 73 G pa lG P yGr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################