################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:41 2021 # Report_file: c_1172_130.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00405.pdb # 2: usage_00542.pdb # 3: usage_00621.pdb # 4: usage_00840.pdb # 5: usage_00916.pdb # 6: usage_01401.pdb # 7: usage_01414.pdb # 8: usage_01618.pdb # 9: usage_01811.pdb # 10: usage_01812.pdb # 11: usage_01921.pdb # 12: usage_01922.pdb # 13: usage_02153.pdb # 14: usage_02154.pdb # 15: usage_02155.pdb # 16: usage_02487.pdb # 17: usage_02877.pdb # 18: usage_03217.pdb # 19: usage_03307.pdb # 20: usage_03993.pdb # 21: usage_04341.pdb # 22: usage_04665.pdb # 23: usage_04797.pdb # 24: usage_04864.pdb # 25: usage_05048.pdb # # Length: 53 # Identity: 14/ 53 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 53 ( 26.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 53 ( 69.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00405.pdb 1 -------------------------GCLVKDYFPEPVTVSWNSGALTSGVHTF 28 usage_00542.pdb 1 --TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_00621.pdb 1 --TTPPSVYPLAPGSAA--NSMVTLGCLVKGYFPEPVTVTW------------ 37 usage_00840.pdb 1 -KTTPPSVYPLAPGSAAQTNSAVTLGCLVKGYFPEPVTVTW------------ 40 usage_00916.pdb 1 ------SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 35 usage_01401.pdb 1 --TTPPSVYPLAPG----TNSMVTLGCLVKGYFPEPVTVTW------------ 35 usage_01414.pdb 1 --TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_01618.pdb 1 --TTAPSVYPLAPGTAALKSSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_01811.pdb 1 ------SVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTW------------ 35 usage_01812.pdb 1 --TTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTW------------ 39 usage_01921.pdb 1 --TTAPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_01922.pdb 1 AKTTAPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 41 usage_02153.pdb 1 ------SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVSW------------ 35 usage_02154.pdb 1 ------SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVSW------------ 35 usage_02155.pdb 1 ------SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVSW------------ 35 usage_02487.pdb 1 ------GPSVFPL--------TAALGCLVKDYFPEPVTVSW------------ 27 usage_02877.pdb 1 --TTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_03217.pdb 1 --TTPPSVYPLAPGS---TNSMVTLGCLVKGYFPEPVTVTW------------ 36 usage_03307.pdb 1 --TTPPSVYPLAP-------SMVTLGCLVKGYFPEPVTVTW------------ 32 usage_03993.pdb 1 ------SVYPLAPG------SMVTLGCLVKGYFPEPVTVTW------------ 29 usage_04341.pdb 1 --TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 usage_04665.pdb 1 -KTTPPSVYPLAPGSAAQTNSAVTLGCLVKGYFPEPVTVTW------------ 40 usage_04797.pdb 1 --TTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTW------------ 39 usage_04864.pdb 1 ------SVFPLAPGS-----SMVTLGCLVKGYFPEPVTVTW------------ 30 usage_05048.pdb 1 --TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW------------ 39 GCLVK YFPEPVTV W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################