################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:59 2021 # Report_file: c_0134_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00067.pdb # 7: usage_00068.pdb # 8: usage_00071.pdb # 9: usage_00075.pdb # # Length: 179 # Identity: 93/179 ( 52.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/179 ( 60.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/179 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 DSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVE 60 usage_00004.pdb 1 DSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMH-SGIPTVE 59 usage_00005.pdb 1 DSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVE 60 usage_00006.pdb 1 DSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVE 60 usage_00007.pdb 1 DSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVE 60 usage_00067.pdb 1 DKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVE 60 usage_00068.pdb 1 -KRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVE 59 usage_00071.pdb 1 DKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVE 60 usage_00075.pdb 1 -GAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHAMGIPTVE 59 rGLHHLVyEIVDN VDE L GyGneI VTI KD Si D GRGMPTG H sG PTVE usage_00003.pdb 61 VIFTVLH--HGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKK-RN 117 usage_00004.pdb 60 VIFTVLH--HGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKK-RN 116 usage_00005.pdb 61 VIFTVLH--HGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKK-RN 117 usage_00006.pdb 61 VIFTVLH--HGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKK-RN 117 usage_00007.pdb 61 VIFTVLH---GVGASVVNALSKWLEVHIVRD-GEYMERFEDGGKPVGTLKKIGTK---N- 112 usage_00067.pdb 61 VIFTVLHAGHGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGKTKK-T- 118 usage_00068.pdb 60 VIFTVLHAGGGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGKTKK-T- 117 usage_00071.pdb 61 VIFTVL----GVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGKTKK-T- 114 usage_00075.pdb 60 VIFTILH----VGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTALKSKT 115 VIFTvL VGaSVVNALS WLEV I RD Y F GG P L K G usage_00003.pdb 118 GTSVTFLPDDTIF-STTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 175 usage_00004.pdb 117 GTSVTFLPDDTIF-STTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 174 usage_00005.pdb 118 GTSVTFLPDDTIF-STTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHY-- 173 usage_00006.pdb 118 GTSVTFLPDDTIF-STTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEE 175 usage_00007.pdb 113 GTSVTFLPDDTIF--TTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYE- 168 usage_00067.pdb 119 GTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEHYH--- 174 usage_00068.pdb 118 GTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEHYH--- 173 usage_00071.pdb 115 GTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEHYHY-- 171 usage_00075.pdb 116 GTKVTFMPDATIF-STTDFKYNTISERLNESAFLLKNVTLSLTDKRT--DEAIEFHYEN 171 GT VTF PDdTIF T F l ERL ESAFLLK kitL D R e H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################