################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:10 2021 # Report_file: c_0340_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00024.pdb # 6: usage_00025.pdb # 7: usage_00030.pdb # 8: usage_00062.pdb # # Length: 102 # Identity: 14/102 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/102 ( 46.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/102 ( 4.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00021.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00022.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00023.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00024.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00025.pdb 1 NLNGFFLTRKNGQCIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHD 60 usage_00030.pdb 1 SLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKD 60 usage_00062.pdb 1 -----ILIPQDGQCEKVSLTAFKTATSNKFDLEYWGHNDLYLAEVDPKSYLILYMINQYN 55 flt gqC l ltAfKTe a f l Y G Nd y p y N d usage_00020.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00021.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00022.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00023.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00024.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00025.pdb 61 GKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDIS 102 usage_00030.pdb 61 GETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLS 102 usage_00062.pdb 56 DDTSLVAHLMVRDLSRQQDFLPAFESVCEDIGLHKDQIVVLS 97 g va L gR p ls ik rFe G renI d S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################