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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:55:44 2021
# Report_file: c_0031_21.html
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#====================================
# Aligned_structures: 3
#   1: usage_00008.pdb
#   2: usage_00025.pdb
#   3: usage_00175.pdb
#
# Length:        237
# Identity:       48/237 ( 20.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    192/237 ( 81.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/237 ( 17.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  GNIGVLVSRVTNPFFAGLFDAIERELHAHGYQVITQTY-DDPEAEERFLKQLKSRELDGV   59
usage_00025.pdb         1  KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGL   60
usage_00175.pdb         1  GNIGVLVSRVTNPFFAGLFDAIERELHAHGYQVMITQTYDDPEAEERFLKQLKSRELDGV   60
                           gnIGVLvsrvtnpfFaglfdaIEreLhahGYqv  t t ddPeaEeRfLkqLkSrelDGv

usage_00008.pdb        60  ILAS--------VEAPDRV-AVAKAFPGRVVVVNA----DVQIPGATSLVLPHYQATRDA  106
usage_00025.pdb        61  IVEPTKSALQTP--NIGYYLNLEKNG-IPFAMINASYAE----LAAPSFTLDDVKGGMMA  113
usage_00175.pdb        61  ILAS--------VEAPDRVMAVAKAFPGRVVVVNA----DVQIPGATSLVLPHYQATRDA  108
                           Ilas          apdrv avaKaf grvvvvNA        pgAtSlvLphyqatrdA

usage_00008.pdb       107  LDYLFNQGHRRFAYVSGG----TISGAHHGQ-SRTQAFLDF-QAHQLLVAQDLLFGQ---  157
usage_00025.pdb       114  AEHLLSLGHTHMMGIFKADDTQ-------GV-KRMNGFIQAHRERELFPSPDMIVTFTTE  165
usage_00175.pdb       109  LDYLFNQGHRRFAYVSGG----TI-------SSRTQAFLDFMQAHQLLVAQDLLFGQ---  154
                           ldyLfnqGHrrfayvsgg              sRtqaFldf qahqLlvaqDllfgq   

usage_00008.pdb       158  IHTAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAVGY-  213
usage_00025.pdb       166  -EKESKLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIVGY  221
usage_00175.pdb       155  IHTAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAVMGY  211
                            htakegqavgKqlaslapnvrPdAvftnsDEvAvgVIDsLlaaDvKVPdDiav g 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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