################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:29:56 2021 # Report_file: c_0046_9.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00104.pdb # 4: usage_00105.pdb # 5: usage_00106.pdb # 6: usage_00107.pdb # 7: usage_00141.pdb # 8: usage_00297.pdb # 9: usage_00298.pdb # 10: usage_00299.pdb # 11: usage_00300.pdb # # Length: 209 # Identity: 122/209 ( 58.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/209 ( 58.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/209 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 PFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRKEIEKVKTYK-----DFPNACK 55 usage_00063.pdb 1 PFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRKEIEKVKTY------DFPNACK 54 usage_00104.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAKAKTYPLASK 60 usage_00105.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAKAKTYPLASK 60 usage_00106.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHET----TYPLASK 56 usage_00107.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKH------TYPLASK 54 usage_00141.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHET----TYPLASK 56 usage_00297.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHE-----TYPLASK 55 usage_00298.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKH------TYPLASK 54 usage_00299.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKH------TYPLASK 54 usage_00300.pdb 1 PLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKH------TYPLASK 54 P S AMDTVTE AIA A EGGIGIIHKNM IE Q E KVK P A K usage_00062.pdb 56 DLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLD 115 usage_00063.pdb 55 DLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLD 114 usage_00104.pdb 61 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 120 usage_00105.pdb 61 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 120 usage_00106.pdb 57 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 116 usage_00107.pdb 55 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 114 usage_00141.pdb 57 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 116 usage_00297.pdb 56 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 115 usage_00298.pdb 55 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 114 usage_00299.pdb 55 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 114 usage_00300.pdb 55 DEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQ 114 D LRVGAAV DT ERV LV A VD V D AHGHS IE K P usage_00062.pdb 116 LIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTN 175 usage_00063.pdb 115 LIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTN 174 usage_00104.pdb 121 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 180 usage_00105.pdb 121 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 180 usage_00106.pdb 117 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 176 usage_00107.pdb 115 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 174 usage_00141.pdb 117 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 176 usage_00297.pdb 116 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 175 usage_00298.pdb 115 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 174 usage_00299.pdb 115 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 174 usage_00300.pdb 115 VIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTG 174 I GNI T EAA L GAD KVGIGPGSICTTRIVAGVGVPQI AI V A T usage_00062.pdb 176 ICIIADGGIRFSGDVVKAIAAGADSVMIG 204 usage_00063.pdb 175 ICIIADGGIRFSGDVVKAIAAGADSVMIG 203 usage_00104.pdb 181 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 209 usage_00105.pdb 181 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 209 usage_00106.pdb 177 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 205 usage_00107.pdb 175 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 203 usage_00141.pdb 177 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 205 usage_00297.pdb 176 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 204 usage_00298.pdb 175 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 203 usage_00299.pdb 175 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 203 usage_00300.pdb 175 VPLIADGGIRFSGDLAKAMVAGAYCVMMG 203 IADGGIRFSGD KA AGA VM G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################