################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:32:22 2021 # Report_file: c_0170_5.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00004.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00020.pdb # 8: usage_00021.pdb # 9: usage_00022.pdb # 10: usage_00023.pdb # 11: usage_00024.pdb # 12: usage_00028.pdb # 13: usage_00029.pdb # 14: usage_00039.pdb # 15: usage_00040.pdb # 16: usage_00045.pdb # # Length: 174 # Identity: 45/174 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/174 ( 27.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/174 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----ILMVGLDGAGKTTVLYKLKLG----E-VITTIPTIGFNVETVQYKNISFTVWDVG 50 usage_00002.pdb 1 -----ILMVGLDGAGKTTVLYKLKLG----E-VITTIPTIGFNVETVQYKNISFTVWDVG 50 usage_00004.pdb 1 -----ILMVGLDAAGKTTILYKLKLG--EIVTTIPT--IGF-NVETVEYKNISFTVWDVG 50 usage_00012.pdb 1 -MEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 54 usage_00013.pdb 1 -MEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 54 usage_00014.pdb 1 -MEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 54 usage_00020.pdb 1 -GSMRILMVGLDAAGKTTILYKLKLG----E-IVTTIPTIGFNVETVEYKNISFTVWDVG 54 usage_00021.pdb 1 -GSMRILMVGLDAAGKTTILYKLKLG----E-IVTTIPTIGFNVETVEYKNISFTVWDVG 54 usage_00022.pdb 1 -GSMRILMVGLDAAGKTTILYKLKLG----E-IVTTIPTIGFNVETVEYKNISFTVWDVG 54 usage_00023.pdb 1 -KEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 54 usage_00024.pdb 1 NKEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 55 usage_00028.pdb 1 ----RILMVGLDGAGKTTVLYKLKLG--------TTIPTIGFNVETV------FTVWDVG 42 usage_00029.pdb 1 NKEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 55 usage_00039.pdb 1 SKKVNVLVVGLDNSGKTTIIERLKP-RP--RQAAEVAPTVGFTVDEVEKGPLTFTVFDMS 57 usage_00040.pdb 1 SKKVNVLVVGLDNSGKTTIIERLKP-RP--RQAAEVAPTVGFTVDEVEKGPLTFTVFDMS 57 usage_00045.pdb 1 NKEMRILMLGLDAAGKTTILYKLKLG----Q-SVTTIPTVGFNVETVTYKNVKFNVWDVG 55 L GLD GKTT LK t g V V F V D usage_00001.pdb 51 GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 110 usage_00002.pdb 51 GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 110 usage_00004.pdb 51 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 110 usage_00012.pdb 55 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 114 usage_00013.pdb 55 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 114 usage_00014.pdb 55 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 114 usage_00020.pdb 55 GLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 114 usage_00021.pdb 55 GLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 114 usage_00022.pdb 55 GLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 114 usage_00023.pdb 55 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 114 usage_00024.pdb 56 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 115 usage_00028.pdb 43 GLDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANK-- 100 usage_00029.pdb 56 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 115 usage_00039.pdb 58 GAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKD 117 usage_00040.pdb 58 GAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKD 117 usage_00045.pdb 56 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 115 G R LW Y FVVD D R AR R L FANK usage_00001.pdb 111 LPEAMSAAEITEKLG---LHSIRNRPWFIQATCATSGEGLYEGLEWLSNS---- 157 usage_00002.pdb 111 LPEAMSAAEITEKLG---LHSIRNRPWFIQATCATSGEGLYEGLEWLSNS---- 157 usage_00004.pdb 111 LPNAMNAAEITDKLG---LHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL--- 158 usage_00012.pdb 115 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN---- 161 usage_00013.pdb 115 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN---- 161 usage_00014.pdb 115 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN---- 161 usage_00020.pdb 115 LPNAMNAAEITDKLG---LHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 165 usage_00021.pdb 115 LPNAMNAAEITDKLG---LHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 165 usage_00022.pdb 115 LPNAMNAAEITDKLG---LHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 165 usage_00023.pdb 115 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTS----- 160 usage_00024.pdb 116 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY--- 163 usage_00028.pdb 101 --EAMSAAEITEKLLHSI------RPWFIQATCA----GLYEGLEWLSNS---- 138 usage_00029.pdb 116 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTS----- 161 usage_00039.pdb 118 IPVAMPPVEIAQALG---LDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS-- 166 usage_00040.pdb 118 LPVAMPPVEIAQALG---LDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL--- 165 usage_00045.pdb 116 LPDAMKPHEIQEKLG---LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY--- 163 AM EI Lg R W G G WL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################