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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:57:44 2021
# Report_file: c_1076_19.html
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#====================================
# Aligned_structures: 8
#   1: usage_00292.pdb
#   2: usage_01031.pdb
#   3: usage_01249.pdb
#   4: usage_01250.pdb
#   5: usage_01251.pdb
#   6: usage_01252.pdb
#   7: usage_01253.pdb
#   8: usage_01254.pdb
#
# Length:         67
# Identity:       11/ 67 ( 16.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/ 67 ( 44.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/ 67 ( 19.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00292.pdb         1  ----QTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDS   56
usage_01031.pdb         1  VPAWRDALVDRMERTVERDKNHPSIVMWSLGNESG--------TGSNLAAMAAWAHARDS   52
usage_01249.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
usage_01250.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
usage_01251.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
usage_01252.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
usage_01253.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
usage_01254.pdb         1  ----EVAYLDRASQLVLRDVNHPSIIIWSLGNEAC--------YGRNHKAMYKLIKQLDP   48
                                 ay dr    V Rd NhpsI  WsLGNE           g n  am    k lD 

usage_00292.pdb        57  NHLVTL-   62
usage_01031.pdb        53  SRPVHY-   58
usage_01249.pdb        49  TRLVHYE   55
usage_01250.pdb        49  TRLVHYE   55
usage_01251.pdb        49  TRLVHYE   55
usage_01252.pdb        49  TRLVHYE   55
usage_01253.pdb        49  TRLVHYE   55
usage_01254.pdb        49  TRLVHYE   55
                            rlVhy 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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