################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:15 2021 # Report_file: c_0275_18.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00064.pdb # 4: usage_00065.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00089.pdb # 8: usage_00097.pdb # 9: usage_00179.pdb # 10: usage_00184.pdb # 11: usage_00193.pdb # 12: usage_00203.pdb # # Length: 78 # Identity: 28/ 78 ( 35.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 78 ( 59.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 78 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00002.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00064.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00065.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00086.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00087.pdb 1 -VTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVPE 59 usage_00089.pdb 1 GVTQTPKFRILKIGQSMTLQCTQDMNHNYMYWYRQDPGMGLKLIYYSVGAGITDKGEVPN 60 usage_00097.pdb 1 -VTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSIHPEYTDQGEVPN 59 usage_00179.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00184.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00193.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00203.pdb 1 -VTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 59 vtQtP tG Tl C Q MnH yM WYrQDPGmgL lI YS Td G vp usage_00001.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00002.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00064.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00065.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00086.pdb 61 ESTVSRIRTEHFPLTLES 78 usage_00087.pdb 60 GYKVSRKEKRNFPLILES 77 usage_00089.pdb 61 GYNVSRSTTEDFPLRLEL 78 usage_00097.pdb 60 GYNVSRSTTEDFPLRLLS 77 usage_00179.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00184.pdb 61 GYNVSRSTTEDFPLRL-- 76 usage_00193.pdb 61 GYNVSRSTTEDFPLRLLS 78 usage_00203.pdb 60 GYNVSRSTTEDFPLRLLS 77 gy VSR te FPL L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################