################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:58 2021 # Report_file: c_0610_65.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00305.pdb # 4: usage_00371.pdb # 5: usage_00566.pdb # 6: usage_00678.pdb # # Length: 98 # Identity: 5/ 98 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 98 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 98 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 WQ-DQLK-AVVDAGYRGIAHDRRGHGHS-TP-V-WDGYDF-DTFADDLNDLLTDLD---- 50 usage_00014.pdb 1 -E-SQMI-FLAAQGYRVIAHDRRGHGRS-SQ-P-WSGNDM-DTYADDLAQLIEHLD---- 49 usage_00305.pdb 1 -E-YQME-YLSSRGYRTIAFDRRGFGRS-DQ-P-WTGNDY-DTFADDIAQLIEHLD---- 49 usage_00371.pdb 1 ---HHRQL-FDPERYKVLLFDQRGCGRS-RPHASLDNNTT-WHLVADIERLREMAG---- 50 usage_00566.pdb 1 --------EL-CDEFRVIVPDLRGFGES-QV-I-PGVATM-EAMADDLAGLCNHLG---- 43 usage_00678.pdb 1 --SFQEN-LVLDRG-ATATFDGPGQGEFE------YKRIAG-DYEKYTSAVVDLLTKLEA 49 D rG G s d l l usage_00013.pdb 51 --L-RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLS 85 usage_00014.pdb 50 --L-RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLIS 84 usage_00305.pdb 50 --L-KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 84 usage_00371.pdb 51 --V-EQWLVFGGSWGSTLALAYAQTHPERVS-EMVLRG 84 usage_00566.pdb 44 --LTGKIVLGGLSMGGYVAFAFARKYRDRLA-GLILCD 78 usage_00678.pdb 50 IRN-DAIGVLGRSLGGNYALKSAACEPRLA--ACISWG 84 g S Gg l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################