################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:17 2021 # Report_file: c_0069_13.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00095.pdb # 4: usage_00102.pdb # 5: usage_00109.pdb # 6: usage_00110.pdb # 7: usage_00111.pdb # 8: usage_00112.pdb # 9: usage_00113.pdb # 10: usage_00114.pdb # 11: usage_00115.pdb # 12: usage_00116.pdb # 13: usage_00176.pdb # # Length: 247 # Identity: 34/247 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/247 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/247 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 QVAIVTGASRGIGRAIALELARRGA-MVIGTATTE----AGAEGIGAAFKQAGLEGRGAV 55 usage_00027.pdb 1 QVAIVTGASRGIGRAIALELARRGA-MVIGTATTE----AGAEGIGAAFKQAGLEGRGAV 55 usage_00095.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00102.pdb 1 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAP-GAAELRAELEQLGVRVTIAA 59 usage_00109.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00110.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00111.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00112.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00113.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00114.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00115.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00116.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 usage_00176.pdb 1 KVALVTGASRGIGQAIALELGRLGA-VVIGTATSA----SGAEKIAETLKANGVEGAGLV 55 va VTGasrGIG aiAleL r GA vigTat GAe i k G eg g v usage_00026.pdb 56 LNVNDATAVDALVESTLK--EFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAV 112 usage_00027.pdb 56 LNVNDATAVDALVESTLK--EFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAV 112 usage_00095.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAGIT-RDNLLVRMKDDEWFDVVNTNLNSL 112 usage_00102.pdb 60 CDAADREALAALLAEL-PED--APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA 116 usage_00109.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG-I------VRMKDDEWFDVVNTNLNSL 106 usage_00110.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNA---------------EWFDVVNTNLNSL 98 usage_00111.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG-I------VRMKDDEWFDVVNTNLNSL 106 usage_00112.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG-I-----------DEWFDVVNTNLNSL 101 usage_00113.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNA-------------DDEWFDVVNTNLNSL 100 usage_00114.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNA--------------DEWFDVVNTNLNSL 99 usage_00115.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG-I--T---VRMKDDEWFDVVNTNLNSL 107 usage_00116.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG-I------VRMKDDEWFDVVNTNLNSL 106 usage_00176.pdb 56 LDVSSDESVAATLEHIQQ--HLGQPLIVVNNAG----------MKDDEWFDVVNTNLNSL 103 l v v A e g vnnA ew v tnL usage_00026.pdb 113 FRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGI 172 usage_00027.pdb 113 FRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGI 172 usage_00095.pdb 113 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 172 usage_00102.pdb 117 RHLHELTADLD----LDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHRRSLG----L 168 usage_00109.pdb 107 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 166 usage_00110.pdb 99 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 158 usage_00111.pdb 107 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 166 usage_00112.pdb 102 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 161 usage_00113.pdb 101 YRLSKAVLRGMTKARWGRIINIGSVV------GQTNYAAAKAGLEGFTRALAREVGSRAI 154 usage_00114.pdb 100 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 159 usage_00115.pdb 108 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 167 usage_00116.pdb 107 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 166 usage_00176.pdb 104 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 163 rLs avlr m gri ni Svv GQ nYAAAkAg g tralare i usage_00026.pdb 173 TVNCVAPGFIDTDMT-----KEQ-QTALKTQI-PLGRLGSPEDIAHAVAFLASPQAGYIT 225 usage_00027.pdb 173 TVNCVAPGFIDTD--------EQ-QTALKTQI-PLGRLGSPEDIAHAVAFLASPQAGYIT 222 usage_00095.pdb 173 TVNAVAPGFIDTDMT--LPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 227 usage_00102.pdb 169 TASSVAWGTWGEV---------GMHDRLVRQGV---LAMEPEHALGALDQMLEN---DDT 213 usage_00109.pdb 167 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 223 usage_00110.pdb 159 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 215 usage_00111.pdb 167 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 223 usage_00112.pdb 162 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 218 usage_00113.pdb 155 TVNAVAPGFIDTDMTR---E-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 208 usage_00114.pdb 160 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 216 usage_00115.pdb 168 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 224 usage_00116.pdb 167 TVNAVAPGFID------PE--AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 216 usage_00176.pdb 164 TVNAVAPGFIDTDMTRELPE-AQ-REALLGQI-PLGRLGQAEEIAKVVGFLASDGAAYVT 220 Tvn VApGfid q aL Qi rlg E ia v flas y T usage_00026.pdb 226 GTTLHVN 232 usage_00027.pdb 223 GTTLHVN 229 usage_00095.pdb 228 GATVPV- 233 usage_00102.pdb 214 AAAIT-- 218 usage_00109.pdb 224 GATVPVN 230 usage_00110.pdb 216 GATVPVN 222 usage_00111.pdb 224 GATVPVN 230 usage_00112.pdb 219 GATVPVN 225 usage_00113.pdb 209 GATVPVN 215 usage_00114.pdb 217 GATVPVN 223 usage_00115.pdb 225 GATVPVN 231 usage_00116.pdb 217 GATVPVN 223 usage_00176.pdb 221 GATVPVN 227 g t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################