################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:11:50 2021 # Report_file: c_0162_12.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00016.pdb # 2: usage_00077.pdb # 3: usage_00101.pdb # 4: usage_00110.pdb # 5: usage_00131.pdb # 6: usage_00153.pdb # 7: usage_00204.pdb # 8: usage_00237.pdb # 9: usage_00380.pdb # 10: usage_00444.pdb # 11: usage_00445.pdb # 12: usage_00465.pdb # 13: usage_00466.pdb # 14: usage_00532.pdb # # Length: 146 # Identity: 52/146 ( 35.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/146 ( 44.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/146 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYS----K 52 usage_00077.pdb 1 --VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSS---- 51 usage_00101.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSS---- 52 usage_00110.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSS---- 52 usage_00131.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSS---- 52 usage_00153.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSSG-EK 55 usage_00204.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSSG-EK 55 usage_00237.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSS---K 53 usage_00380.pdb 1 --TVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 58 usage_00444.pdb 1 -GVVYQAKLCDSGELVAIKKVLQ-----NRELQIMRKL---DHCNIVRLRYFFYSS---- 47 usage_00445.pdb 1 -GVVYQAKLCDSGELVAIKKVLQ-----NRELQIMRKL---DHCNIVRLRYFFYSSG-EK 50 usage_00465.pdb 1 FGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVL---DHVNIIKLVDYFYTT---- 53 usage_00466.pdb 1 FGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVL---DHVNIIKLVDYFYTT---- 53 usage_00532.pdb 1 -GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---DHCNIVRLRYFFYSSG-EK 55 V sG A KKVlQ NREL IM L dH NI L FY usage_00016.pdb 53 D-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 109 usage_00077.pdb 52 --EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 107 usage_00101.pdb 53 --EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 108 usage_00110.pdb 53 ---VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 107 usage_00131.pdb 53 --EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 108 usage_00153.pdb 56 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 113 usage_00204.pdb 56 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 113 usage_00237.pdb 54 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 111 usage_00380.pdb 59 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHR 118 usage_00444.pdb 48 D-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 104 usage_00445.pdb 51 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 108 usage_00465.pdb 54 --NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHR 109 usage_00466.pdb 54 --NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHR 109 usage_00532.pdb 56 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHR 113 YLN YVP T v R P y yQLfR iHs giCHR usage_00016.pdb 110 DIKPQNLLLDPDTAVLKLCDFGSAKQ 135 usage_00077.pdb 108 DIKPQNLLLDPDTAVLKLCDFGSAKQ 133 usage_00101.pdb 109 DIKPQNLLLDPDTAVLKLCDFGSAKQ 134 usage_00110.pdb 108 DIKPQNLLLDPDTAVLKLCDFGSAKQ 133 usage_00131.pdb 109 DIKPQNLLLDPDTAVLKLCDFGSAKQ 134 usage_00153.pdb 114 DIKPQNLLLDPDTAVLKLCDFGSAKQ 139 usage_00204.pdb 114 DIKPQNLLLDPDTAVLKLCDFGSAKQ 139 usage_00237.pdb 112 DIKPQNLLLDPDTAVLKLCDFGSAKQ 137 usage_00380.pdb 119 DIKPHNVLVNEADGTLKLCDFGSAKK 144 usage_00444.pdb 105 DIKPQNLLLDPDTAVLKLCDFGSAKQ 130 usage_00445.pdb 109 DIKPQNLLLDPDTAVLKLCDFGSAKQ 134 usage_00465.pdb 110 DIKPQNLLVNSKDNTLKLCDFGSAKK 135 usage_00466.pdb 110 DIKPQNLLVNSKDNTLKLCDFGSAKK 135 usage_00532.pdb 114 DIKPQNLLLDPDTAVLKLCDFGSAKQ 139 DIKPqNlL LKLCDFGSAK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################