################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:35 2021 # Report_file: c_1261_81.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00193.pdb # 2: usage_00641.pdb # 3: usage_01146.pdb # 4: usage_03006.pdb # 5: usage_03040.pdb # 6: usage_03041.pdb # 7: usage_03042.pdb # 8: usage_03824.pdb # # Length: 63 # Identity: 5/ 63 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 63 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 63 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00193.pdb 1 --GRIINITSIVGV--TGN--PGQANYCASKAGLIGFSKSLAQE-----IASRNVTVNCI 49 usage_00641.pdb 1 --GLLTLAGAKAAL--DGT--PGMIGYGMAKGAVHQLCQSLAGKNSGMP---SGAAAIAV 51 usage_01146.pdb 1 -WGRVLFIGSVTTF--TAGGPVPIPAYTTAKTALLGLTRALAKE-----WARLGIRVNLL 52 usage_03006.pdb 1 RGGSILNIASMYST--FGS--ADRPAYSASKGAIVQLTRSLACE-----YAAERIRVNAI 51 usage_03040.pdb 1 --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV 49 usage_03041.pdb 1 --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV 49 usage_03042.pdb 1 --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV 49 usage_03824.pdb 1 --PTIVNISSILHSGKMKV--PGTSVYSASKAALSRFTEVLAAE-----MEPRNIRCFTI 51 g i s Y K a LA e usage_00193.pdb 50 APG 52 usage_00641.pdb 52 LPV 54 usage_01146.pdb 53 CPG 55 usage_03006.pdb 52 APG 54 usage_03040.pdb 50 EPG 52 usage_03041.pdb 50 EPG 52 usage_03042.pdb 50 EPG 52 usage_03824.pdb 52 SPG 54 Pg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################