################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:59 2021 # Report_file: c_0299_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00038.pdb # 2: usage_00075.pdb # 3: usage_00076.pdb # 4: usage_00077.pdb # 5: usage_00078.pdb # 6: usage_00079.pdb # 7: usage_00254.pdb # 8: usage_00255.pdb # # Length: 189 # Identity: 105/189 ( 55.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 176/189 ( 93.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/189 ( 6.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 LP---VSHCWQGDDVSGFE---NYPGKARNASELRADLEQA-RLIPGPKRLNLHAIYLES 53 usage_00075.pdb 1 --VPISIHCWQGDDVGGFELSGDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 58 usage_00076.pdb 1 --VPISIHCFQGDDVGGFEL-GDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 57 usage_00077.pdb 1 --VPISIHCAQGDDVGGFELSGDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 58 usage_00078.pdb 1 --VPISIHCAQGDDVGGFELSGDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 58 usage_00079.pdb 1 --VPISIHCAQGDDVGGFELSGDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 58 usage_00254.pdb 1 --VPISIHCWQGDDVGGFEL-GDYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 57 usage_00255.pdb 1 --VPISIHCWQGDDVGGFEL--DYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAET 56 siHC QGDDVgGFE dYPGKAttpeELRmDLEkA sLIPGkhRvNLHAIYaEt usage_00038.pdb 54 -DTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWID 112 usage_00075.pdb 59 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 118 usage_00076.pdb 58 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 117 usage_00077.pdb 59 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 118 usage_00078.pdb 59 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 118 usage_00079.pdb 59 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 118 usage_00254.pdb 58 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 117 usage_00255.pdb 57 DGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWID 116 gkvVeRDQlePrHFekWVrWAKrhgLGLDFNPtlFSHekakDGlTLaHpDqaIRQFWID usage_00038.pdb 113 HCKASRRVSAYFGEQLGTPSVN-IWIPD-GKDITVDRLAPRQRLLAALDEVISEKLNPAH 170 usage_00075.pdb 119 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 178 usage_00076.pdb 118 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 177 usage_00077.pdb 119 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 178 usage_00078.pdb 119 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 178 usage_00079.pdb 119 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 178 usage_00254.pdb 118 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 177 usage_00255.pdb 117 HCIASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAY 176 HCiASRkigeYFGkeLeTPclt IWIPD yKDtpsDRLtPRkRLkesLDqifaaeiNeAy usage_00038.pdb 171 HIDAVESKL 179 usage_00075.pdb 179 NLDAVESKL 187 usage_00076.pdb 178 NLDAVESKL 186 usage_00077.pdb 179 NLDAVESKL 187 usage_00078.pdb 179 NLDAVESKL 187 usage_00079.pdb 179 NLDAVESKL 187 usage_00254.pdb 178 NLDAVESKL 186 usage_00255.pdb 177 NLDAVESKL 185 nlDAVESKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################