################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:13 2021 # Report_file: c_1473_227.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00187.pdb # 2: usage_00305.pdb # 3: usage_00306.pdb # 4: usage_00325.pdb # 5: usage_00690.pdb # 6: usage_00692.pdb # 7: usage_02611.pdb # 8: usage_02612.pdb # 9: usage_02895.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 41 ( 65.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00187.pdb 1 -TDVAKMKKIKEEIKA---HE----G---Q-VVEMTL---- 25 usage_00305.pdb 1 SDLKSLATKFASDHES---GK--------L-LVLPTVW--- 26 usage_00306.pdb 1 -DLKSLATKFASDHES---GK--------L-LVLPTVW--- 25 usage_00325.pdb 1 -TQEELANRFRALVEA---NE--------I-LQIPGAH--- 25 usage_00690.pdb 1 -------TVESLLES-DDVVL--------VGGKSLTTYGLS 25 usage_00692.pdb 1 ----MECLEDVFYQMI---DESQSLSLCGM-VW-EH----- 27 usage_02611.pdb 1 ------MDDLTTALEG---NR--------V-REMFGSG--- 20 usage_02612.pdb 1 -TQEELANRFRALVEA---NE--------I-LQIPGAH--- 25 usage_02895.pdb 1 -LDEMREKFLRFFEKH---EI----------YPHGRVK--- 24 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################