################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:23 2021 # Report_file: c_1255_29.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00187.pdb # 2: usage_00188.pdb # 3: usage_00505.pdb # 4: usage_00842.pdb # 5: usage_00843.pdb # 6: usage_00844.pdb # 7: usage_00845.pdb # 8: usage_00846.pdb # 9: usage_00847.pdb # 10: usage_01380.pdb # 11: usage_01495.pdb # 12: usage_01497.pdb # # Length: 52 # Identity: 1/ 52 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 52 ( 7.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 52 ( 73.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00187.pdb 1 ---H----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 38 usage_00188.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00505.pdb 1 KKLT----IGLI-GNPNSGKTTLFNQLTG---------SRQRV--------- 29 usage_00842.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00843.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00844.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00845.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00846.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_00847.pdb 1 PTLH----MSFT-GNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVT---- 41 usage_01380.pdb 1 -NLV----IEGTG-----RTTDVPIQTATMLQAKGYE------TKMYVMAVP 36 usage_01495.pdb 1 ----TPTLHSFT-GNPGTGKTTVALK-AGLLHRLGYVRKGH--LVSVT---- 40 usage_01497.pdb 1 IPLL----AFAA-WS-GTGKTTLLKKLIPALCARGIR------PGLIKHTH- 39 gkTt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################