################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:32 2021 # Report_file: c_1442_1743.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00062.pdb # 4: usage_02547.pdb # 5: usage_04910.pdb # 6: usage_05021.pdb # 7: usage_05913.pdb # 8: usage_06074.pdb # 9: usage_08196.pdb # 10: usage_08197.pdb # 11: usage_08821.pdb # 12: usage_08824.pdb # 13: usage_08855.pdb # 14: usage_11135.pdb # 15: usage_17157.pdb # # Length: 19 # Identity: 4/ 19 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 19 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 19 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_00061.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_00062.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_02547.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_04910.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_05021.pdb 1 ------TLTDEQLLYSFNL 13 usage_05913.pdb 1 ---GGMMSVDETLMCSFQI 16 usage_06074.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_08196.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_08197.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_08821.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_08824.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_08855.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_11135.pdb 1 DNAGAMMSVDETLMCSFQI 19 usage_17157.pdb 1 DNWGAVMGVSEDLLCSFEL 19 m vdE L cSF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################