################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:24 2021 # Report_file: c_0840_49.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00090.pdb # 2: usage_00091.pdb # 3: usage_00123.pdb # 4: usage_00124.pdb # 5: usage_00288.pdb # 6: usage_00425.pdb # 7: usage_01069.pdb # # Length: 70 # Identity: 10/ 70 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 70 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 70 ( 34.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 LYDDFANVLSQ-V-D---VLLMLDVYAAGEPPI-PGADSRALCRTIRNRGKLDPILVPDS 54 usage_00091.pdb 1 LYDDFANVLSQ-V-D---VLLMLDVYAAGEPPI-PGADSRALCRTIRNRGKLDPILVPDS 54 usage_00123.pdb 1 -FDDFVQVLSQ-V-D---ALI-LDVYAAGEAPI-VGADSKSLCRSIRNLGKVDPILVSDT 52 usage_00124.pdb 1 LFDDFVQVLSQ-V-D---ALI-LDVYAAGEAPI-VGADSKSLCRSIRNLGKVDPILVSDT 53 usage_00288.pdb 1 LFDDFVQVLSQ-V-D---ALIMLDVYAAGEAPI-VGADSKSLCRSIRNLGKVDPILVSDT 54 usage_00425.pdb 1 ---QIYKFLLDTLKASPSEVVFLD-------DIG---ANLKPARDLG----MVTILVQDT 43 usage_01069.pdb 1 LFDDFVQVLSQ-V-D---ALI-LDVYAAGEAPI-VGADSKSLCRSIRNLGKVDPILVSDT 53 df vLsq v d l LD pI ds lcR ir dpILV D usage_00090.pdb 55 ESAPEMLAQI 64 usage_00091.pdb 55 ESAPEMLAQI 64 usage_00123.pdb 53 SQLGDVLDQI 62 usage_00124.pdb 54 SQLGDVLDQI 63 usage_00288.pdb 55 SQLGDVLDQI 64 usage_00425.pdb 44 DTALKELEKV 53 usage_01069.pdb 54 SQLGDVLDQI 63 L qi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################