################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:36 2021 # Report_file: c_0949_45.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00053.pdb # 2: usage_00174.pdb # 3: usage_00189.pdb # 4: usage_00190.pdb # 5: usage_00362.pdb # 6: usage_00363.pdb # 7: usage_00626.pdb # 8: usage_00627.pdb # 9: usage_00628.pdb # 10: usage_00629.pdb # 11: usage_00701.pdb # 12: usage_00761.pdb # 13: usage_00797.pdb # 14: usage_00798.pdb # 15: usage_00817.pdb # 16: usage_00857.pdb # 17: usage_00858.pdb # 18: usage_00933.pdb # 19: usage_00940.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 48 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 48 ( 68.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 PPARIHGDLWNG-NVLW-QD--D--GAVVIDP--AA--HG-------- 30 usage_00174.pdb 1 --RVIHRDIKPE-NLLL-GS-AGE-LKIADFGWSVH------------ 30 usage_00189.pdb 1 --RLVHRDLAAR-NVLV-KT-PQH-VKITDFGLAKL--LG-------- 32 usage_00190.pdb 1 ---QFLPHRFAA-EDSY-IN-NK-----KIKKGDQV--IVY------- 28 usage_00362.pdb 1 --GYVHRSVKAS-HILI-SV-DGK-VYLSGLRSNLS--MI-------- 32 usage_00363.pdb 1 --DIIHRDLKPS-NLAV-NE-DSE-LKILDFGL-ARHT---------- 31 usage_00626.pdb 1 --RYIHRNLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00627.pdb 1 --RYIHRNLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00628.pdb 1 --RYIHRNLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00629.pdb 1 --RYIHRNLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00701.pdb 1 --RVIHRDIKPE-NLLL-GS-AGE-LKIADFGWSVH--A--------- 31 usage_00761.pdb 1 --CLIHNDFSSD-HILF-DTEKNTICGIIDFGDAAI--S--------- 33 usage_00797.pdb 1 --RYIHRDLATR-NILV-EN-ENR-VKIGDFGLTKV--L--------- 31 usage_00798.pdb 1 --RYIHRDLATR-NILV-EN-ENR-VKIGDFGLTKV--L--------- 31 usage_00817.pdb 1 --RCVHRDLAAR-NILV-ES-EAH-VKIADFGLAKL--L--------- 31 usage_00857.pdb 1 --RYIHRDLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00858.pdb 1 --RYIHRDLATR-NILV-EN-ENR-VKIGDFGLTKV--LPQ------- 33 usage_00933.pdb 1 --RCVHRDLAAR-NILV-ES-EAH-VKIADFGLAKL--L--------- 31 usage_00940.pdb 1 --LTIHEDC---HETLFYEA-KG---------KPKS--VKYWLAKLNN 31 h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################