################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:10 2021 # Report_file: c_1262_40.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00046.pdb # 2: usage_00560.pdb # 3: usage_00561.pdb # 4: usage_00562.pdb # 5: usage_00786.pdb # 6: usage_01113.pdb # 7: usage_01171.pdb # 8: usage_01176.pdb # 9: usage_01177.pdb # 10: usage_01712.pdb # 11: usage_01786.pdb # 12: usage_01922.pdb # 13: usage_02065.pdb # # Length: 53 # Identity: 1/ 53 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 53 ( 39.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 53 ( 52.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 -KISLQYWDGYASYETYLRQLS--------------LIPGK-ATDYVDYVSPN 37 usage_00560.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_00561.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_00562.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_00786.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRHFKGSM-EEWQAMGVMN--- 41 usage_01113.pdb 1 GVTASSD--------TFYPGQERYDTFTGRVVRRFQGSM-KEWQDMGVLN--- 41 usage_01171.pdb 1 GVTASSD--------TFYPGQERYDTFTGRVVRRFQGSM-KEWQDMGVLN--- 41 usage_01176.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_01177.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_01712.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 usage_01786.pdb 1 GVTASSD--------TFYPGQERYDTFTGRVVRRFQGSM-KEWQDMGVLN--- 41 usage_01922.pdb 1 GITASSD--------TFYPGQERYDTFSGRVVRHFKGSM-EEWQSMGVMN--- 41 usage_02065.pdb 1 GVTASSD--------TFYPGQERYDTYSGRVVRRFKGSM-EEWQAMGVMN--- 41 tassd Tfypgqe gsm wq mgv n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################