################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:35 2021 # Report_file: c_0194_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00250.pdb # 2: usage_00304.pdb # 3: usage_00305.pdb # 4: usage_00364.pdb # 5: usage_00365.pdb # 6: usage_00366.pdb # 7: usage_00367.pdb # # Length: 166 # Identity: 59/166 ( 35.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/166 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/166 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00250.pdb 1 TAEEAVRLARLGRLLTGE-R-WVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMG 58 usage_00304.pdb 1 DAVEAVRTCRLARELLDGHN-LVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTS 59 usage_00305.pdb 1 DAVEAVRTCRLARELLDGHN-LVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTS 59 usage_00364.pdb 1 -AEEAVRIARLAKASG-L--CDIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTS 56 usage_00365.pdb 1 -AEEAVRIARLAKASG-L--CDIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTS 56 usage_00366.pdb 1 -AEEAVRIARLAKASG-L--CDIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTS 56 usage_00367.pdb 1 -AEEAVRIARLAKASG-L--CDIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTS 56 A EAVR RLa K EV L P vETLKA EqL gF V Yts usage_00250.pdb 59 PDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSH 118 usage_00304.pdb 60 DDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEA-K-VPVLVDAGVGTASD 117 usage_00305.pdb 60 DDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEA-K-VPVLVDAGVGTASD 117 usage_00364.pdb 57 DDVVLARKLEELGVHAI-PGASPIGSGQGILNPLNLSFIIEQA-K-VPVIVDAGIGSPKD 113 usage_00365.pdb 57 DDVVLARKLEELGVHAI-PGASPIGSGQGILNPLNLSFIIEQA-K-VPVIVDAGIGSPKD 113 usage_00366.pdb 57 DDVVLARKLEELGVHAI-PGASPIGSGQGILNPLNLSFIIEQA-K-VPVIVDAGIGSPKD 113 usage_00367.pdb 57 DDVVLARKLEELGVHAI-PGASPIGSGQGILNPLNLSFIIEQA-K-VPVIVDAGIGSPKD 113 dD Ar L e G a P A IGSG Gi np nL i e a k vPV VDAG G d usage_00250.pdb 119 AAEVMELGLDAVLVNTAIAEAQDPPAMAEA-FRLAVEAGRKAYLA- 162 usage_00304.pdb 118 AAIAMELGCEAVLMNTAIAHAKDPVMMAEA-MKHAIVAGRLAYLAG 162 usage_00305.pdb 118 AAIAMELGCEAVLMNTAIAHAKDPVMMAEA-MKHAIVAGRLAYL-- 160 usage_00364.pdb 114 AAYA-ELGADGVLLNTAVSGADDPVKA---RAKLAVEAGRLSYEA- 154 usage_00365.pdb 114 AAYA-ELGADGVLLNTAVSGADDPVKA---RAKLAVEAGRLSYEA- 154 usage_00366.pdb 114 AAYA-ELGADGVLLNTAVSGADDPVKA---RAKLAVEAGRLSYEA- 154 usage_00367.pdb 114 AAYA-ELGADGVLLNTAVSGADDPVKA---RAKLAVEAGRLSYEA- 154 AA a ELG VL NTA A DPv k A AGRl Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################