################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:36 2021 # Report_file: c_0098_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00061.pdb # 2: usage_00074.pdb # 3: usage_00075.pdb # 4: usage_00076.pdb # 5: usage_00077.pdb # 6: usage_00078.pdb # 7: usage_00079.pdb # # Length: 179 # Identity: 162/179 ( 90.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/179 ( 91.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/179 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 VVFAYHDMGCLGIEALLAAGYEISAI-FTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV 59 usage_00074.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 usage_00075.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 usage_00076.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 usage_00077.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 usage_00078.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 usage_00079.pdb 1 VVFAYHDMGCLGIEALLAAGYEIS-AIFTHTD--------GSVARLAAERGIPVYAPDNV 51 VVFAYHDMGCLGIEALLAAGYEIS a FTHTD GSVARLAAERGIPVYAPDNV usage_00061.pdb 60 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 119 usage_00074.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 usage_00075.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 usage_00076.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 usage_00077.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 usage_00078.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 usage_00079.pdb 52 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV 111 NHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLV usage_00061.pdb 120 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQ------ 172 usage_00074.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIK 170 usage_00075.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIK 170 usage_00076.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIK 170 usage_00077.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIK 170 usage_00078.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQ------ 164 usage_00079.pdb 112 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQ------ 164 NGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################