################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:23 2021 # Report_file: c_0464_156.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00086.pdb # 2: usage_00716.pdb # 3: usage_00793.pdb # 4: usage_00794.pdb # 5: usage_01230.pdb # # Length: 133 # Identity: 7/133 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/133 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/133 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI-STIALLPEVESAQWDEVIGTN 59 usage_00716.pdb 1 --FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA-GL--------MTEEKFEKVINAN 49 usage_00793.pdb 1 KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVN 59 usage_00794.pdb 1 KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVN 59 usage_01230.pdb 1 RIVARSLDARNEDEVTAFLNAADAHA-PLEVTIFNVGA-NVNFPILETTDRVFRKVWEMA 58 Dv d a v Na t n usage_00086.pdb 60 LTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDL 118 usage_00716.pdb 50 LTGAFRVAQRASRSMQRN-KFGRMIFIASV--------QANYAASKAGVIGMARSIAREL 100 usage_00793.pdb 60 VFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL 119 usage_00794.pdb 60 VFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL 119 usage_01230.pdb 59 CWAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMAREL 117 F r G i s y K v g A eL usage_00086.pdb 119 VGYGITVNAVAPG 131 usage_00716.pdb 101 SKANVTANVVAPG 113 usage_00793.pdb 120 APKGHTVNAYAPG 132 usage_00794.pdb 120 APKGHTVNAYAPG 132 usage_01230.pdb 118 MPKNIHVAHLIID 130 tvn apg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################