################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:40 2021 # Report_file: c_0850_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00611.pdb # 2: usage_00661.pdb # 3: usage_00662.pdb # 4: usage_00676.pdb # 5: usage_00677.pdb # 6: usage_00826.pdb # 7: usage_00846.pdb # 8: usage_00847.pdb # 9: usage_00851.pdb # # Length: 93 # Identity: 22/ 93 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/ 93 ( 71.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 93 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00611.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00661.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00662.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00676.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00677.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00826.pdb 1 PKVNKWWRN---------LYKDFLAQGVDGVWNDVNEPQINDTPNKTMP--E-------- 41 usage_00846.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00847.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 usage_00851.pdb 1 PRMRAWWSNMFSFDNYEG-----SAPN-LYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEH 54 PrmraWWsN sApn lyVWNDmNEPsvfngPevTMl a usage_00611.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00661.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00662.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00676.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00677.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00826.pdb 42 -DYHNVYGFLMVKASREGILDARPEKRPFILTR 73 usage_00846.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00847.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 usage_00851.pdb 55 RDIHNIYGLYVHMATADGLIQRSGGIERPFV-L 86 DiHNiYGlyvhmAtadGliqrsggierpfv l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################