################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:19 2021 # Report_file: c_1419_22.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00023.pdb # 4: usage_00024.pdb # 5: usage_00241.pdb # 6: usage_00338.pdb # 7: usage_00490.pdb # 8: usage_00491.pdb # 9: usage_00492.pdb # 10: usage_00493.pdb # 11: usage_00514.pdb # 12: usage_00515.pdb # 13: usage_01048.pdb # 14: usage_01049.pdb # 15: usage_01050.pdb # 16: usage_01051.pdb # 17: usage_01052.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 57 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 57 ( 64.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00022.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00023.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00024.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00241.pdb 1 -FEEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYMSMLNR 42 usage_00338.pdb 1 --------AAQVLDAIVNRFGI--DLGDLAGRDVQARVAEVLDT------------- 34 usage_00490.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00491.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00492.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00493.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00514.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_00515.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIT-EEALPTYQTMLNT 42 usage_01048.pdb 1 GFDEQVRELRERAKEIP-----DDYFVVLV--------GDMIK-EEALPTYQTMLNT 43 usage_01049.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIK-EEALPTYQTMLNT 42 usage_01050.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIK-EEALPTYQTMLNT 42 usage_01051.pdb 1 GFDEQVRELRERAKEIP-----DDYFVVLV--------GDMIK-EEALPTYQTMLNT 43 usage_01052.pdb 1 -FDEQVRELRERAKEIP-----DDYFVVLV--------GDMIK-EEALPTYQTMLNT 42 lrerakeIp yfvvLv gdmi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################