################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:42 2021 # Report_file: c_0518_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00136.pdb # 2: usage_00203.pdb # 3: usage_00284.pdb # 4: usage_00304.pdb # 5: usage_00481.pdb # 6: usage_00512.pdb # 7: usage_00547.pdb # # Length: 130 # Identity: 30/130 ( 23.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/130 ( 33.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/130 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 L-------VYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENR 53 usage_00203.pdb 1 L-------VYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENR 53 usage_00284.pdb 1 -TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENR 59 usage_00304.pdb 1 -----------AYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENR 49 usage_00481.pdb 1 -TEDEIQQCIADFAQAARNAINAGFDGVEIHGANGYLIDQFTQKSCNHRQDRWGGSIENR 59 usage_00512.pdb 1 --KDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENR 58 usage_00547.pdb 1 L-------VYETYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENR 53 AA a AGfD E H A GYL dQF N R D yGGSiENR usage_00136.pdb 54 ARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKG 113 usage_00203.pdb 54 ARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKG 113 usage_00284.pdb 60 CRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG---DT-NPTALGLYMVESLNKY---- 111 usage_00304.pdb 50 ARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKG 109 usage_00481.pdb 60 ARFAVEVTRAVIEAVGADRVGVKLSPYSQYLGMG--TMD-ELVPQFEYLIAQMRRL---- 112 usage_00512.pdb 59 ARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAET-GIVAQYAYVAGELEKRAKAG 117 usage_00547.pdb 54 ARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKG 113 aR lE G d G r SP m t Y l usage_00136.pdb 114 QGIAYISVV- 122 usage_00203.pdb 114 QGIAYISVV- 122 usage_00284.pdb 112 -DLAYCHVV- 119 usage_00304.pdb 110 QGIAYISVV- 118 usage_00481.pdb 113 -DVAYLHLAN 121 usage_00512.pdb 118 KRLAFVHLV- 126 usage_00547.pdb 114 QGIAYISVV- 122 Ay v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################