################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:28 2021 # Report_file: c_0004_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00178.pdb # 2: usage_00197.pdb # 3: usage_00316.pdb # 4: usage_00328.pdb # 5: usage_00344.pdb # 6: usage_00345.pdb # 7: usage_00398.pdb # # Length: 269 # Identity: 228/269 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 229/269 ( 85.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/269 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 -----WSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAE--- 52 usage_00197.pdb 1 -----WSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG 55 usage_00316.pdb 1 -----WSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG 55 usage_00328.pdb 1 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG 60 usage_00344.pdb 1 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAE--- 57 usage_00345.pdb 1 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG 60 usage_00398.pdb 1 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG 60 WSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAE usage_00178.pdb 53 --KKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 110 usage_00197.pdb 56 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 115 usage_00316.pdb 56 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 115 usage_00328.pdb 61 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 120 usage_00344.pdb 58 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 117 usage_00345.pdb 61 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 120 usage_00398.pdb 61 WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV 120 sKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV usage_00178.pdb 111 LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 170 usage_00197.pdb 116 LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 175 usage_00316.pdb 116 LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 175 usage_00328.pdb 121 LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 180 usage_00344.pdb 118 LIHTSNGQLQALNEADGAVKWTVNLD------RGESAPTTAFGAAVVGGDNGRVSAVLE- 170 usage_00345.pdb 121 LIHTSNGQLQALNEADGAVKWTVNLDP-SLSLRGESAPTTAFGAAVVGGDNGRVSAVLE- 178 usage_00398.pdb 121 LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 180 LIHTSNGQLQALNEADGAVKWTVNLD RGESAPTTAFGAAVVGGDNGRVSAVL usage_00178.pdb 171 QGQMIWQQRISQATGSTE--------TTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 222 usage_00197.pdb 176 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 235 usage_00316.pdb 176 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 235 usage_00328.pdb 181 QGQMIWQQRISQA---------SDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 231 usage_00344.pdb 171 QGQ-IWQQRISQ-----------DVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-WKRE 217 usage_00345.pdb 179 QGQ-IWQQRISQA---------SDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-WKRE 227 usage_00398.pdb 181 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 240 QGQ IWQQRISQ TTPVVVNGVVFALAYNGNLTALDLRSGQI WKRE usage_00178.pdb 223 LGSVNDFIVDGNRIYLVDQNDRVMALT-- 249 usage_00197.pdb 236 LGSVNDFIVDGNRIYLVDQNDRVMALT-- 262 usage_00316.pdb 236 LGSVNDFIVDGNRIYLVDQNDRVMALT-- 262 usage_00328.pdb 232 LGSVNDFIVDGNRIYLVDQNDRVMALT-- 258 usage_00344.pdb 218 LGSVNDFIVDGNRIYLVDQNDRVA----- 241 usage_00345.pdb 228 LGSVNDFIVDGNRIYLVDQNDRVALT--- 253 usage_00398.pdb 241 LGSVNDFIVDGNRIYLVDQNDRVMALTID 269 LGSVNDFIVDGNRIYLVDQNDRV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################