################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:44 2021 # Report_file: c_1413_70.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00024.pdb # 2: usage_00061.pdb # 3: usage_00066.pdb # 4: usage_00067.pdb # 5: usage_00158.pdb # 6: usage_00221.pdb # 7: usage_00222.pdb # 8: usage_00233.pdb # 9: usage_00252.pdb # 10: usage_00253.pdb # 11: usage_00282.pdb # 12: usage_00310.pdb # 13: usage_00343.pdb # 14: usage_00453.pdb # 15: usage_00460.pdb # 16: usage_00461.pdb # 17: usage_00462.pdb # 18: usage_00543.pdb # 19: usage_00717.pdb # 20: usage_00786.pdb # 21: usage_00845.pdb # 22: usage_00861.pdb # 23: usage_00870.pdb # 24: usage_00871.pdb # 25: usage_00929.pdb # 26: usage_00930.pdb # 27: usage_00955.pdb # 28: usage_00988.pdb # 29: usage_00995.pdb # 30: usage_01069.pdb # 31: usage_01077.pdb # 32: usage_01383.pdb # 33: usage_01457.pdb # # Length: 96 # Identity: 3/ 96 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 96 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 96 ( 55.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00061.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00066.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00067.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00158.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00221.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00222.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00233.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00252.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00253.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00282.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00310.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00343.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00453.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00460.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00461.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00462.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00543.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00717.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00786.pdb 1 -----DDSDISLFVAAIICC---------GDRPGLLNVGHIEKMQEGIVHVLRLHLQSNH 46 usage_00845.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00861.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00870.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00871.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00929.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00930.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_00955.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_00988.pdb 1 PLGSDLKDAEAVQKFFLEEIQLGEELLAQ------G----DYEKGVDHLTNAIAVCG--Q 48 usage_00995.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_01069.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 usage_01077.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_01383.pdb 1 ------DSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 45 usage_01457.pdb 1 -----DDSDLAIFIAVIILS---------GDRPGLLNVKPIEDIQDNLLQALELQLKLNH 46 dsd a f a ii l ie q l l l l h usage_00024.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKK--- 79 usage_00061.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00066.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLL-------- 74 usage_00067.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00158.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00221.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 usage_00222.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLL-------- 74 usage_00233.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00252.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00253.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVI----- 77 usage_00282.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET 82 usage_00310.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00343.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00453.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 usage_00460.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00461.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00462.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 usage_00543.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00717.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00786.pdb 47 PDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKTES 82 usage_00845.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00861.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00870.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 80 usage_00871.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 80 usage_00929.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00930.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 usage_00955.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_00988.pdb 49 P---QQLLQVLQQT---------------------- 59 usage_00995.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 usage_01069.pdb 47 PESSQLFAKLLQK----------------------- 59 usage_01077.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE- 80 usage_01383.pdb 46 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT-- 79 usage_01457.pdb 47 PESSQLFAKLLQKMTDLRQIVTEHVQLLQVIK---- 78 P qlf klLQk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################