################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:22 2021 # Report_file: c_0973_30.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00083.pdb # 2: usage_00508.pdb # 3: usage_00509.pdb # 4: usage_00510.pdb # # Length: 73 # Identity: 46/ 73 ( 63.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 73 ( 64.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 73 ( 34.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 LYCDILESTFEKFKQPSA-LDHFQKCFLILKLDHGRVHSEKSGQQE-GKGWKAIRVDLVM 58 usage_00508.pdb 1 LYCDILESTFEKF-----DLDHFQKCALILKLDHGRVH-------QEGKGWKAIRVDLVM 48 usage_00509.pdb 1 LYCDILE---------------SQKCFLILKLDHGRVHS--------GKGWKAIRVDLVM 37 usage_00510.pdb 1 LYCDILE---------------AQKCFLILKLDHGRV----------GKGWKAIRVDLVM 35 LYCDILE QKCfLILKLDHGRV GKGWKAIRVDLVM usage_00083.pdb 59 CPYDRRAFALLGW 71 usage_00508.pdb 49 CPYDRRAFALLGW 61 usage_00509.pdb 38 CPYDRRAFALLGW 50 usage_00510.pdb 36 CPYDRRAFALLGW 48 CPYDRRAFALLGW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################