################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:31 2021 # Report_file: c_1120_56.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00002.pdb # 2: usage_00743.pdb # 3: usage_00744.pdb # 4: usage_00793.pdb # 5: usage_00794.pdb # 6: usage_00795.pdb # 7: usage_00796.pdb # 8: usage_00799.pdb # 9: usage_00800.pdb # 10: usage_00801.pdb # 11: usage_00802.pdb # 12: usage_00803.pdb # 13: usage_00804.pdb # 14: usage_00805.pdb # 15: usage_00806.pdb # 16: usage_00807.pdb # 17: usage_00808.pdb # 18: usage_00867.pdb # # Length: 100 # Identity: 10/100 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/100 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/100 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 IGPQIKKE---LKQLEKTLNQKN--N-LKGLSHQEFAENAADVFMALEHAHPFRKGNGRA 54 usage_00743.pdb 1 S----PEETPAFTSLVDWYNLEADK---GIL---TPVELAALLHYRYIRIHPFEDGNGRI 50 usage_00744.pdb 1 S----PEETPAFTSLVDWYNLEADK---GIL---TPVELAALLHYRYIRIHPFEDGNGRI 50 usage_00793.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00794.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00795.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00796.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00799.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00800.pdb 1 -----EKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 45 usage_00801.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00802.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00803.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00804.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00805.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00806.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00807.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00808.pdb 1 HPQDVEKQ---MQEFVQWLNSE----EAMNL---HPVEFAALAHYKLVYIHPFIDGNGRT 50 usage_00867.pdb 1 -----EKE---GNALMQDLEEEG--Y-LVGLEKAKFVERLAHYYCEINVLHPFRVGSGLA 49 n e L vE aA HPF GnGr usage_00002.pdb 55 NRMFMEKLGQAAGHTVDFSFI---TKGRMTTACIEAMQYG 91 usage_00743.pdb 51 ARLLVNFVLHRYGYP-IVI--HSEDKSNYLNILHQCDVEA 87 usage_00744.pdb 51 ARLLVNFVLHRYGYP-IVI--HSEDKSNYLNILHQCDVEA 87 usage_00793.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00794.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00795.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00796.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00799.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00800.pdb 46 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 82 usage_00801.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00802.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00803.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00804.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00805.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00806.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00807.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00808.pdb 51 SRLLMNLILMQAGYPPITI--RKEQRSDYYHVLEAANEG- 87 usage_00867.pdb 50 QRIFFEQLAIHAGYQLSWQGI---EKEAWNQANQSGAMG- 85 R Gy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################