################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:38 2021 # Report_file: c_0378_83.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00072.pdb # 2: usage_00325.pdb # 3: usage_00508.pdb # 4: usage_00585.pdb # 5: usage_00653.pdb # 6: usage_00948.pdb # # Length: 97 # Identity: 16/ 97 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 97 ( 24.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 97 ( 38.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 -RADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDR 59 usage_00325.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDG 59 usage_00508.pdb 1 ----PPLVRVNR--------ALFCKAHGFYPPEIYMTWMKNGE-----IDYGDILPSGDG 43 usage_00585.pdb 1 QRTEPPLVR-------------FCKAHGFYPPEIYMTWMKNGE----EIDYGDILPSGDG 43 usage_00653.pdb 1 ---DAPKTHMTHHA-----ATLRCWALSFYPAEITLTWQRD------DTELVETRPAGDG 46 usage_00948.pdb 1 ----EVRVWGKE---ADGILTLSCRAHGFYPRPIVVSWLKDGAVRGQDAQSGGIVPNGDG 53 p C A gFYP I tW P GDg usage_00072.pdb 60 TFQKWAAVV--VPSGEEQRYTCHVQHEGLPKPLTLRW 94 usage_00325.pdb 60 TFQKWASVV--VPLGKEQNYTCRVYHEGLPEPLTLRW 94 usage_00508.pdb 44 TYQAWA-SISN-------LYSCHVEHSGV--HMVLQ- 69 usage_00585.pdb 44 TYQAWASIE--L------LYSCHVEHSGV--HMVLQV 70 usage_00653.pdb 47 TFQKWAAVV--V-G-QEQRYTCHVQHEGLPKPLTLR- 78 usage_00948.pdb 54 TYHTWVTID--AQPGDGDKYQCRVEHASLPQPGLYSW 88 T q Wa Y C V H g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################