################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:45 2021 # Report_file: c_1480_262.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00140.pdb # 2: usage_00155.pdb # 3: usage_00162.pdb # 4: usage_00314.pdb # 5: usage_00428.pdb # 6: usage_00488.pdb # 7: usage_00700.pdb # 8: usage_00739.pdb # 9: usage_00786.pdb # 10: usage_01067.pdb # 11: usage_01300.pdb # 12: usage_02353.pdb # 13: usage_02446.pdb # 14: usage_02564.pdb # 15: usage_03174.pdb # 16: usage_03187.pdb # 17: usage_03258.pdb # 18: usage_03319.pdb # 19: usage_03362.pdb # 20: usage_03363.pdb # 21: usage_03647.pdb # 22: usage_03648.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 57 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 57 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00140.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_00155.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_00162.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_00314.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_00428.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_00488.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_00700.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_00739.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_00786.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_01067.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_01300.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_02353.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_02446.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_02564.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_03174.pdb 1 EVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVS----------------- 40 usage_03187.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_03258.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 usage_03319.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_03362.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_03363.pdb 1 -LGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFAR 44 usage_03647.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA- 44 usage_03648.pdb 1 ILGAMLM------------TEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRAR---- 41 lgamlm tehniafyqqlmqKirdsise #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################