################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:33 2021 # Report_file: c_0592_99.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00081.pdb # 2: usage_00138.pdb # 3: usage_00311.pdb # 4: usage_00434.pdb # 5: usage_00490.pdb # 6: usage_00564.pdb # 7: usage_00698.pdb # 8: usage_00729.pdb # 9: usage_00730.pdb # # Length: 85 # Identity: 0/ 85 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 85 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 85 ( 44.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 -KVALLDKDKEYLDRLTGVFNTKYAD-KLE--VYSFTDEKNAIESVKE---------YRI 47 usage_00138.pdb 1 PRILICEDDPDIARLLNL-LEK-GG---FD--SD-VHSAAQALEQVAR---------RPY 43 usage_00311.pdb 1 RRVALTSQS--ASVALLEVLLRQKG-LSPV--LERAEG--TAESLLA----------AGY 43 usage_00434.pdb 1 -HIVIVEDEPVTQARLQSYFTQ-EG---YT--VSVTASGAGLREIQN----------QSV 43 usage_00490.pdb 1 --DVIVDDDAHVRIAVKTILSD-AG---FH--IISADSGGQCIDLLKK---------GFS 43 usage_00564.pdb 1 --ILLVEDDKRDLELTLVALER-SK---LSNEVIVVRDGAQALDYLNREGDFRAREEGNP 54 usage_00698.pdb 1 MRVLLIEDDSAIAQSIELMLKS-ES---FN--VYTTDLGEEGIDLGKL---------YDY 45 usage_00729.pdb 1 -KILLVDDDRELTSLLKELLEM-EG---FN--VIVAHDGEQALDLLD----------DSI 43 usage_00730.pdb 1 -KILLVDDDRELTSLLKELLEM-EG---FN--VIVAHDGEQALDLLD----------DSI 43 usage_00081.pdb 48 DVLIAEEDF-NIDKSEFK------- 64 usage_00138.pdb 44 AA-TVDLNLPDQDGVSLIRALRRD- 66 usage_00311.pdb 44 DGVLRIG---D-DALREWYGVV--- 61 usage_00434.pdb 44 DLILLDINLPDENGL-LTRALRER- 66 usage_00490.pdb 44 GVVLLDI--P-GDGWDTIRAILDNS 65 usage_00564.pdb 55 AVILLDLKLPKVNGLEVLQQVRSS- 78 usage_00698.pdb 46 DIILLDLNLPDMSGYEVLRTLRLSK 70 usage_00729.pdb 44 DLLLLDVMMPKKNGIDTLKALRQTH 68 usage_00730.pdb 44 DLLLLDVMMPKKNGIDTLKALRQTH 68 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################