################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:00 2021 # Report_file: c_1119_32.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00281.pdb # 2: usage_00297.pdb # 3: usage_00299.pdb # 4: usage_00324.pdb # 5: usage_00325.pdb # # Length: 136 # Identity: 12/136 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/136 ( 16.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/136 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00281.pdb 1 ---------------------GINVVLYYAPE---VFKTLGASTDIALLQTIIVGVINLT 36 usage_00297.pdb 1 --------------------------------APEV------STDIALLQTIIVGVINLT 22 usage_00299.pdb 1 ---------------------GVNAIYYYADQ---IYLSAGVKSNDVQYVTAGTGAVNVF 36 usage_00324.pdb 1 VSSYRQPIIISIVLQLSQQLSGINAVFYYSTG---IFKDA------PIYATIGAGVVNTI 51 usage_00325.pdb 1 VSSYRQPIIISIVLQLSQQLSGINAVFYYSTG---IFKDA-----EPIYATIGAGVVNTI 52 Ti Gv N usage_00281.pdb 37 FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA----PGIVALLSMLFYVAAF 92 usage_00297.pdb 23 FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA----PGIVALLSMLFYVAAF 78 usage_00299.pdb 37 MTMVTVFVVELWGRRNLLLIGFSTCLTACIVLTVALALQNTISWMPYVSIVCVIVYVIGH 96 usage_00324.pdb 52 FTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD----MSFVCIGAILVFVAFF 107 usage_00325.pdb 53 FTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD----NYFVCIGAILVFVAFF 108 fTv V GR L IG gma V l Va f usage_00281.pdb 93 AMS------------- 95 usage_00297.pdb 79 AMSWGPVCWVLLS--- 91 usage_00299.pdb 97 AVGPSPI--------- 103 usage_00324.pdb 108 EIGPGPIPWFIVAELF 123 usage_00325.pdb 109 EIGPGPIPWFIVAELF 124 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################