################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:05 2021 # Report_file: c_0083_8.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00261.pdb # # Length: 327 # Identity: 300/327 ( 91.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 300/327 ( 91.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/327 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 ---LGSFVEFTT-VLRCPELVSNPHLKGKLVQLLSVGA-PLTDNSPGF--DIFEHDELVN 53 usage_00039.pdb 1 NPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVN 60 usage_00261.pdb 1 ----GSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVN 56 GSFVEFTT VLRCPELVSNPHLKGKLVQLLSVGA PLTDNSPGF DIFEHDELVN usage_00038.pdb 54 KNLLYALLDFYVIVEKT-GSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNA 112 usage_00039.pdb 61 KNLLYALLDFYVIVEKT-GSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNA 119 usage_00261.pdb 57 KNLLYALLDFYVIVEKTG---SQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNA 113 KNLLYALLDFYVIVEKT SQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNA usage_00038.pdb 113 DFFVRFVAR-LNDLTFLLDEGLSNLAEVHNIQNELD----------EDKELQTRLASASR 161 usage_00039.pdb 120 DFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELD-N------E-EDKELQTRLASASR 171 usage_00261.pdb 114 DFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPREEEDKELQTRLASASR 173 DFFVRFVAR LNDLTFLLDEGLSNLAEVHNIQNELD EDKELQTRLASASR usage_00038.pdb 162 QAKSSCGLADKS-KLFEIYSKDIPAAFVTPEIVYRLAS-LNYNLESLVGPKCGELKVKDP 219 usage_00039.pdb 172 QAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDP 231 usage_00261.pdb 174 QAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDP 233 QAKSSCGLADKS KLFEIYSKDIPAAFVTPEIVYRLAS LNYNLESLVGPKCGELKVKDP usage_00038.pdb 220 QSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPE 279 usage_00039.pdb 232 QSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPE 291 usage_00261.pdb 234 QSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPE 293 QSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPE usage_00038.pdb 280 FIEKLLNFANKAEEQRKADEEEDLE-- 304 usage_00039.pdb 292 FIEKLLNFANKAEEQRKADEEEDLEYG 318 usage_00261.pdb 294 FIEKLLNFANKAEEQRKADEEEDLEYG 320 FIEKLLNFANKAEEQRKADEEEDLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################