################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:40 2021 # Report_file: c_1351_28.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00003.pdb # 2: usage_00406.pdb # 3: usage_00689.pdb # 4: usage_00896.pdb # 5: usage_00897.pdb # 6: usage_00898.pdb # 7: usage_01136.pdb # 8: usage_01137.pdb # 9: usage_01138.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 53 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 53 ( 67.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSL---CPVHLVDSC- 34 usage_00406.pdb 1 KEKVS---------------EVSGRGVGMDVV-KNVVESLN---GSISIESEK 34 usage_00689.pdb 1 -HWSKIGRLKRSNMPKLGFG------ERNATCG------------RMICDVE- 33 usage_00896.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSL---CPVHLVDSC- 34 usage_00897.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSLH--CPVHLVDSC- 35 usage_00898.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSLHG-CPVHLVDSC- 36 usage_01136.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSLHKGCPVHLVDSC- 37 usage_01137.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSLH--CPVHLVDSC- 35 usage_01138.pdb 1 -RSHWTDV------------QVK-GTSLPRAL-HCWDRSL---CPVHLVDSC- 34 ds #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################