################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:41 2021 # Report_file: c_0194_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00183.pdb # 2: usage_00184.pdb # 3: usage_00225.pdb # 4: usage_00226.pdb # 5: usage_00235.pdb # 6: usage_00264.pdb # 7: usage_00265.pdb # 8: usage_00276.pdb # 9: usage_00277.pdb # 10: usage_00577.pdb # 11: usage_00578.pdb # 12: usage_00604.pdb # 13: usage_00605.pdb # # Length: 220 # Identity: 63/220 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 191/220 ( 86.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/220 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00183.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00184.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00225.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00226.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00235.pdb 1 LEYILAENGVNMVRQRVWVNPW---------DGNYNLDYNIQLARRAKAAGLGLYINFHY 51 usage_00264.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00265.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00276.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00277.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00577.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00578.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00604.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 usage_00605.pdb 1 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGG-NNDLEKAIQIGKRATANGMKLLADFHY 59 ifktLkEaGVNyVRvRiWndPy g NndLekaIQigkRAtAnGmkLladFHY usage_00183.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00184.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00225.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00226.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00235.pdb 52 SDTWADPAHQTTPAGWP--SDINNLAWKLYNYTLDSMNRFADAGIQVDIVSIGNEITQGL 109 usage_00264.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00265.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00276.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00277.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00577.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00578.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00604.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 usage_00605.pdb 60 SDFWADPAKQKAPKAW-ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 118 SDfWADPAkQkaPkaW lnfedkktaLYqYTkqSlkamkaAGIdigmVqvGNEtngGL usage_00183.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00184.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00225.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00226.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00235.pdb 110 LWPLGKTNNWYNIARLLHSAAWGVKDSRLNP-KPKIMVHLDNGWNWDTQNWWYTNVLSQG 168 usage_00264.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00265.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00276.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00277.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00577.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00578.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00604.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 usage_00605.pdb 119 AG--ET--DWAKMSQLFNAGSQAVRETD---SNILVALHFTNPETSGRYAWIAETLHRHH 171 ag et dWakmsqLfnagsqaVretd nilvalHftNpetsgryaWiaetlhrhh usage_00183.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00184.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00225.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00226.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00235.pdb 169 PFEMS-DFDMMGVSFYPFYSASATLDSLRRSLNNMVSRWG 207 usage_00264.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00265.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00276.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00277.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00577.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00578.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00604.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 usage_00605.pdb 172 -----VDYDVFASSYYPFWH--GTLKNLTSVLTSVADTYG 204 DyDvfasSyYPFwh gTLknLtsvLtsvadtyG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################