################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:55:36 2021 # Report_file: c_0083_12.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00014.pdb # 2: usage_00075.pdb # 3: usage_00079.pdb # 4: usage_00096.pdb # 5: usage_00115.pdb # 6: usage_00117.pdb # 7: usage_00121.pdb # 8: usage_00123.pdb # 9: usage_00134.pdb # 10: usage_00136.pdb # 11: usage_00138.pdb # 12: usage_00168.pdb # 13: usage_00174.pdb # 14: usage_00176.pdb # 15: usage_00180.pdb # 16: usage_00182.pdb # 17: usage_00216.pdb # 18: usage_00218.pdb # 19: usage_00222.pdb # 20: usage_00273.pdb # 21: usage_00356.pdb # 22: usage_00358.pdb # 23: usage_00360.pdb # 24: usage_00362.pdb # 25: usage_00364.pdb # 26: usage_00366.pdb # 27: usage_00425.pdb # 28: usage_00434.pdb # 29: usage_00471.pdb # # Length: 235 # Identity: 154/235 ( 65.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/235 ( 67.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/235 ( 16.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00075.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00079.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00096.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00115.pdb 1 --IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 58 usage_00117.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00121.pdb 1 SGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQP 60 usage_00123.pdb 1 -GVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQP 59 usage_00134.pdb 1 ----ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 56 usage_00136.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00138.pdb 1 ----ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 56 usage_00168.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00174.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00176.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 usage_00180.pdb 1 --IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 58 usage_00182.pdb 1 --IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 58 usage_00216.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00218.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00222.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00273.pdb 1 ----ALVRTVLRAGDREDITEPAICALRHLTSRHQEAE-AQNAVRLHYGLPVVVKLLHPP 55 usage_00356.pdb 1 --IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 58 usage_00358.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00360.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00362.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00364.pdb 1 --IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 58 usage_00366.pdb 1 ----ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 56 usage_00425.pdb 1 GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 60 usage_00434.pdb 1 ----ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 56 usage_00471.pdb 1 -GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP 59 AL LRAGD DITEPA CALRHLTSRH eAE AQN VRL YG P VKLL P usage_00014.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 107 usage_00075.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-Q---------- 108 usage_00079.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R-RTSMGGTQ- 115 usage_00096.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R-RTSM----G 112 usage_00115.pdb 59 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 106 usage_00117.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 107 usage_00121.pdb 61 NQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQD-AQ-R-HVAA----G 113 usage_00123.pdb 60 NQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQD-AQ-R---------- 107 usage_00134.pdb 57 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 104 usage_00136.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQRRT--------- 110 usage_00138.pdb 57 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R-RT-S----- 107 usage_00168.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ------------ 106 usage_00174.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD--------------- 104 usage_00176.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQ-Q-Q------------ 105 usage_00180.pdb 59 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 106 usage_00182.pdb 59 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 106 usage_00216.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R-RT-S----- 111 usage_00218.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 108 usage_00222.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 108 usage_00273.pdb 56 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 103 usage_00356.pdb 59 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 106 usage_00358.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 108 usage_00360.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 108 usage_00362.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 108 usage_00364.pdb 59 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 106 usage_00366.pdb 57 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 104 usage_00425.pdb 61 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R-R-------- 109 usage_00434.pdb 57 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ-R---------- 104 usage_00471.pdb 60 SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD-TQ------------ 106 WPL KAT GLIRNLALCPANHAPL E IPRLVQLLV AHQ usage_00014.pdb 108 -----------VRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 156 usage_00075.pdb 109 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 161 usage_00079.pdb 116 QQF-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 170 usage_00096.pdb 113 QQF-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 167 usage_00115.pdb 107 -QF-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 160 usage_00117.pdb 108 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 160 usage_00121.pdb 114 ---TQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQR 170 usage_00123.pdb 108 --H-----TDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQR 160 usage_00134.pdb 105 -----------VRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 153 usage_00136.pdb 111 -----------VRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00138.pdb 108 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 160 usage_00168.pdb 107 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00174.pdb 105 --------VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 156 usage_00176.pdb 106 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 158 usage_00180.pdb 107 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00182.pdb 107 --F-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00216.pdb 112 -QF-----VEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQR 165 usage_00218.pdb 109 --R-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 161 usage_00222.pdb 109 ----------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 158 usage_00273.pdb 104 -----------GVREEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 152 usage_00356.pdb 107 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 157 usage_00358.pdb 109 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00360.pdb 109 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00362.pdb 109 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 usage_00364.pdb 107 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 157 usage_00366.pdb 105 --E-------GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 155 usage_00425.pdb 110 -QF-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 163 usage_00434.pdb 105 -QF-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 158 usage_00471.pdb 107 --R-----VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR 159 vrmEEIVEgCTGALHILARD NR I LNTIPLFVQLLYS ENIQR usage_00014.pdb 157 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 207 usage_00075.pdb 162 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF------- 209 usage_00079.pdb 171 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 221 usage_00096.pdb 168 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 218 usage_00115.pdb 161 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE--- 212 usage_00117.pdb 161 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 210 usage_00121.pdb 171 VAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKN 225 usage_00123.pdb 161 VAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISE--- 212 usage_00134.pdb 154 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 203 usage_00136.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00138.pdb 161 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 211 usage_00168.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 210 usage_00174.pdb 157 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 207 usage_00176.pdb 159 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 209 usage_00180.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00182.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00216.pdb 166 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE--- 217 usage_00218.pdb 162 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---- 212 usage_00222.pdb 159 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 208 usage_00273.pdb 153 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR------ 201 usage_00356.pdb 158 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 207 usage_00358.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00360.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00362.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 209 usage_00364.pdb 158 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 207 usage_00366.pdb 156 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM----- 205 usage_00425.pdb 164 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE--- 215 usage_00434.pdb 159 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE--- 210 usage_00471.pdb 160 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSED-- 212 VAAGVLCELAQDKEAA AI AEGA APL ELLHSRNEG ATYAAAVLF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################