################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:10 2021 # Report_file: c_1148_36.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00359.pdb # 2: usage_00517.pdb # 3: usage_01361.pdb # 4: usage_02115.pdb # 5: usage_02849.pdb # 6: usage_02973.pdb # 7: usage_02974.pdb # 8: usage_02977.pdb # 9: usage_02978.pdb # 10: usage_02979.pdb # 11: usage_03295.pdb # 12: usage_03562.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 46 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 46 ( 58.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00359.pdb 1 QLKRVAEAKLPTPWGD--------FLVGFEELA---TGHDHVALVY 35 usage_00517.pdb 1 RHQVTNVDP-------------ETKTIKVKDLI---TNEEKTEAYD 30 usage_01361.pdb 1 SSS---DCQDEE--G-------RKGNKLYYNFP--WGKELIETLWN 32 usage_02115.pdb 1 KTVPLSVEKQDD----------GKLLVKYKNVE---TGEESEDV-- 31 usage_02849.pdb 1 ------VAIDRA-----------AKLVTVRRLL---DGSEYQESYD 26 usage_02973.pdb 1 KTVPLSVEKQDD----------GKLLVKYKNVE---TGEESEDV-- 31 usage_02974.pdb 1 KTVPLSVEKQDD----------GKLLVKYKNVE---TGEESEDV-- 31 usage_02977.pdb 1 GCVPSHIKKLPT----------NQLQVTWEDHA---SGKEDTGT-- 31 usage_02978.pdb 1 KTVPLSVEKQDD----------GKLLVKYKNVE---TGEESEDVYD 33 usage_02979.pdb 1 KTVPLSVEKQDD----------GKLLVKYKNVE---TGEESEDVYD 33 usage_03295.pdb 1 -----LFVPFTDETT-DDGRTYEH-GRYLDVDPAG-GDEVALDFN- 37 usage_03562.pdb 1 RTR-ATSARREN----------GLWIVEAEDID---TGKKYSWQAR 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################