################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:48 2021 # Report_file: c_1218_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00006.pdb # 2: usage_00188.pdb # 3: usage_00433.pdb # 4: usage_00520.pdb # 5: usage_00689.pdb # 6: usage_00737.pdb # 7: usage_00738.pdb # # Length: 61 # Identity: 4/ 61 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 61 ( 55.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 61 ( 44.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 usage_00188.pdb 1 GVIFRPHLKPFYSVGKEEHLQGVQVHI-VDFNKA-S-LSEIQFYV-QEVTALY------- 49 usage_00433.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 usage_00520.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 usage_00689.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 usage_00737.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 usage_00738.pdb 1 CVIVRR---------------DNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDS 45 cVIvRr dnnekc Vkkesv l tqqmlvdi knlflka usage_00006.pdb - usage_00188.pdb - usage_00433.pdb - usage_00520.pdb 46 I 46 usage_00689.pdb - usage_00737.pdb 46 I 46 usage_00738.pdb 46 I 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################