################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:11 2021 # Report_file: c_1409_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00036.pdb # 2: usage_00066.pdb # 3: usage_00143.pdb # 4: usage_00277.pdb # 5: usage_01185.pdb # 6: usage_01393.pdb # # Length: 69 # Identity: 2/ 69 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 69 ( 55.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 69 ( 40.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -SAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQI--ALLKGSAVEAMFLR---- 53 usage_00066.pdb 1 --AEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQI--ALLKGSAVEAMFLR---- 52 usage_00143.pdb 1 --AEENFLILTEMATSHVQILVEFTKRLPGFQTLDHEDQI--ALLKGSAVEAMFLR---- 52 usage_00277.pdb 1 PEEAIKCEDKFTKSKTVYSILRHVAEVLE-----------YTKDE--QLESLFQRTAWVF 47 usage_01185.pdb 1 --AEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQI--ALLKGSAVEAMFLR---- 52 usage_01393.pdb 1 ---EENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQI--ALLKGSAVEAMFLR---- 51 eenfliltemat hvq Lveftk Lp all saveamflr usage_00036.pdb 54 SAEIFNKK- 61 usage_00066.pdb 53 SAEIFNKKL 61 usage_00143.pdb 53 SAEIF---- 57 usage_00277.pdb 48 DDKYK---- 52 usage_01185.pdb 53 SAE------ 55 usage_01393.pdb 52 SAEIFNK-- 58 sae #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################