################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:44 2021 # Report_file: c_1297_298.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00707.pdb # 2: usage_00763.pdb # 3: usage_00992.pdb # 4: usage_01565.pdb # 5: usage_01585.pdb # 6: usage_01655.pdb # 7: usage_02905.pdb # 8: usage_03202.pdb # # Length: 33 # Identity: 6/ 33 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 33 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 33 ( 39.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00707.pdb 1 -----NCRKYCQDKGARNGKCI--NSNCHCYY- 25 usage_00763.pdb 1 --GSPQCLKPCKDAGMRFGKCM--NRKCHCTPK 29 usage_00992.pdb 1 NM-AKKCRDCCG---G-NGKCF--GPQCLCN-- 24 usage_01565.pdb 1 ---SRQCLKPCKDAGMRFGKCT--NGKCHCTP- 27 usage_01585.pdb 1 ---SPQCLKPCKDAGMRFGKCM--NRKCHCT-- 26 usage_01655.pdb 1 ---SGQCLKPCKKAGMRFGKCI--NGKCDCT-- 26 usage_02905.pdb 1 ---YQECQDCCKNAGHNGGTCM--FFKCKCA-- 26 usage_03202.pdb 1 ---KPPCRKACISEKFTDGHCSKILRRCLCTKP 30 C C G C C C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################