################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:30 2021 # Report_file: c_0629_16.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00010.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00063.pdb # 5: usage_00064.pdb # 6: usage_00069.pdb # 7: usage_00070.pdb # 8: usage_00097.pdb # 9: usage_00102.pdb # 10: usage_00103.pdb # 11: usage_00104.pdb # 12: usage_00195.pdb # 13: usage_00196.pdb # # Length: 96 # Identity: 4/ 96 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 96 ( 9.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 96 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --------VEDVLAVIFLLK--E-----PLGRKQISERLELG-EGSVRTLLRKLSHLDII 44 usage_00024.pdb 1 --------TPSMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 50 usage_00025.pdb 1 ----------SMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 48 usage_00063.pdb 1 ----------SMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 48 usage_00064.pdb 1 ----------SMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 48 usage_00069.pdb 1 --------TPSMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 50 usage_00070.pdb 1 --------TPSMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 50 usage_00097.pdb 1 RQVREAHRRELIDDYVELISDLIR-EVGEARQVDMAARLGVS-QPTVAKMLKRLATMGLI 58 usage_00102.pdb 1 -----------SEDYIEQIY-LIE-EKGYARVSDIAEALAVH-PSSVTK-VQKLDKDEYL 45 usage_00103.pdb 1 -----------SEDYIEQIY-LIE-EKGYARVSDIAEALAVH-PSSVTK-VQKLDKDEYL 45 usage_00104.pdb 1 --------EKRDREILEVLILRFGG--GPVGLATLATALSEDPGTLEEVHEPYLIRQGLL 50 usage_00195.pdb 1 ----------SMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 48 usage_00196.pdb 1 ----------SMEDYIEQIYMLIE-EKGYARVSDIAEALAVH-PSSVTKMVQKLDKDEYL 48 e a L v L usage_00010.pdb 45 RSK---GHFLTLKGKEIRDKLLS------------- 64 usage_00024.pdb 51 IYEKYRGLVLTSKGKKIGKRLVYRAELLEQFLRIIG 86 usage_00025.pdb 49 IYEKYRGLVLTSKGKKIGKRLVYRAELLEQFLRIIG 84 usage_00063.pdb 49 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 84 usage_00064.pdb 49 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 84 usage_00069.pdb 51 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 86 usage_00070.pdb 51 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 86 usage_00097.pdb 59 EMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG 94 usage_00102.pdb 46 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 81 usage_00103.pdb 46 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 81 usage_00104.pdb 51 KRTPR-GRVATELAYRHLG----------------- 68 usage_00195.pdb 49 IYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIG 84 usage_00196.pdb 49 IYE---GLVLTSKGKKIGKRLVYRHELLEQFLRIIG 81 G lT g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################