################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:52 2021 # Report_file: c_0271_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00024.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00238.pdb # 6: usage_00239.pdb # 7: usage_00240.pdb # 8: usage_00241.pdb # # Length: 253 # Identity: 175/253 ( 69.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 175/253 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 78/253 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00028.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00029.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00030.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00238.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00239.pdb 1 -------RYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 53 usage_00240.pdb 1 EEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVR 60 usage_00241.pdb 1 -------------------------------------------PGPLLVDLASDFVGAVR 17 PGPLLVDLASDFVGAVR usage_00024.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00028.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00029.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00030.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00238.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00239.pdb 54 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 113 usage_00240.pdb 61 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 120 usage_00241.pdb 18 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL 77 EDRLVNGKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQL usage_00024.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00028.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00029.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00030.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00238.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00239.pdb 114 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 173 usage_00240.pdb 121 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 180 usage_00241.pdb 78 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF 137 TSVFKDVCLTPEEMNLVVAKVLTMFSKLNLQEIPPLVYQLLVLSSKGSRRSVLDGIIAFF usage_00024.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00028.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00029.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00030.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00238.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00239.pdb 174 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 211 usage_00240.pdb 181 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD---------------------- 218 usage_00241.pdb 138 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLDCELGRELLKHLKAGQQGDPSKC 197 RELDKQHREEQSSTAPADELYHVEGTVILHIVFAIKLD usage_00024.pdb ------------- usage_00028.pdb ------------- usage_00029.pdb ------------- usage_00030.pdb ------------- usage_00238.pdb ------------- usage_00239.pdb ------------- usage_00240.pdb ------------- usage_00241.pdb 198 LCPFSIALLLSLT 210 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################