################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:24 2021 # Report_file: c_0151_14.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00015.pdb # 2: usage_00108.pdb # 3: usage_00109.pdb # 4: usage_00125.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00168.pdb # 8: usage_00169.pdb # 9: usage_00228.pdb # # Length: 120 # Identity: 21/120 ( 17.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/120 ( 59.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/120 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 V-VSQHPSRVISKSGTSVKIECRSLDFQA--TTMFWYRQFPKQSLMLMATSNEGS-KATY 56 usage_00108.pdb 1 VQLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 59 usage_00109.pdb 1 VQLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 59 usage_00125.pdb 1 VQLVETG-GGLVQPGGSLRLSCTASGFTFSMHAMTWYRQAPGKQRELVAVITSHGDRANY 59 usage_00166.pdb 1 -QLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 58 usage_00167.pdb 1 -QLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 58 usage_00168.pdb 1 -QLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 58 usage_00169.pdb 1 -QLVESG-GALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSY 58 usage_00228.pdb 1 VQLQESG-GGLVQPGGSLKLSCAASGFTFSRYAMSWYRQAPGKERESVARISSGGGTIYY 59 l e g g lvqpGgSl lsC asgF M WYRQaPgk re vA s g Y usage_00015.pdb 57 EQGVEKDKFLINHASL--TLSTLTVTSAHPEDSSFYICSAPGGVGAFFGQGTRLTVVE-- 112 usage_00108.pdb 60 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTVS--- 113 usage_00109.pdb 60 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTV---- 112 usage_00125.pdb 60 TD-SVRGRFTISRDN-TKNMVYLQMNSLKPEDTAVYYCNVPRYD-SWGQGTQVTV----- 111 usage_00166.pdb 59 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTV---- 111 usage_00167.pdb 59 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTV---- 111 usage_00168.pdb 59 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTV---- 111 usage_00169.pdb 59 ED-SVKGRFTISRDD-ARNTVYLQMNSLKPEDTAVYYCNVNVGF-EYWGQGTQVTV---- 111 usage_00228.pdb 60 AD-SVKGRFTISRED-AKNTVYLQMNSLKPEDTAVYYCYVG----GFWGQGTQVTVSSGG 113 d svkgrFtIsr n vyLqmnSlkPEDtavYyC v gqgt t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################