################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:36 2021 # Report_file: c_1493_56.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00233.pdb # 2: usage_00387.pdb # 3: usage_00389.pdb # 4: usage_00392.pdb # 5: usage_00393.pdb # 6: usage_00394.pdb # 7: usage_00474.pdb # 8: usage_00757.pdb # 9: usage_01184.pdb # 10: usage_01392.pdb # 11: usage_01445.pdb # 12: usage_01446.pdb # 13: usage_01539.pdb # 14: usage_01540.pdb # # Length: 30 # Identity: 2/ 30 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 30 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 30 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 ---DIKYLENNQ---YSDEGIKAYEFI--- 21 usage_00387.pdb 1 --SDKTFLENNQ---YTDEGVKVYEFIFG- 24 usage_00389.pdb 1 ---DKTFLENNQ---YTDEGVKVYEFIFG- 23 usage_00392.pdb 1 ----KTFLENNQ---YTDEGVKVYEFIFG- 22 usage_00393.pdb 1 ----KTFLENNQ---YTDEGVKVYEFIFG- 22 usage_00394.pdb 1 ---DKTFLENNQ---FTDEGVKVYEFIFG- 23 usage_00474.pdb 1 --SFRDFLDRTQ---YTDTGIFAYEWI--- 22 usage_00757.pdb 1 ---DIKYLENNQ---YSDEGIKAYEFI--- 21 usage_01184.pdb 1 --SDKTFLENNQ---YTDEGVKVYEFIFG- 24 usage_01392.pdb 1 SEKTLNKLVEYAEEV---ELKKKVEKTFMG 27 usage_01445.pdb 1 ---DKTFLENNQ---YTDEGVKVYEFIFG- 23 usage_01446.pdb 1 ---DKTFLENNQ---YTDEGVKVYEFIFG- 23 usage_01539.pdb 1 ---DKTFLENNQ---YTDEGVKVYEFIFG- 23 usage_01540.pdb 1 --SDKTFLENNQ---YTDEGVKVYEFIFG- 24 L q eg k yE i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################