################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:45 2021 # Report_file: c_1344_25.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00295.pdb # 3: usage_00316.pdb # 4: usage_00329.pdb # 5: usage_00417.pdb # 6: usage_00418.pdb # 7: usage_00419.pdb # 8: usage_00420.pdb # # Length: 38 # Identity: 8/ 38 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 38 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 38 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEEVRALLRD 36 usage_00295.pdb 1 -PPDL-VKLPPVSPMRFPDGHIGWLVTSHAAARTVM-- 34 usage_00316.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEEVRALL-- 34 usage_00329.pdb 1 RYGELQETE-PVSRVRPPYGEEAWLVTRYEDVRAVL-- 35 usage_00417.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEQVRAVL-- 34 usage_00418.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEQVRAVL-- 34 usage_00419.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEQVRAVL-- 34 usage_00420.pdb 1 -IADIRAAA-PVTRATFTSGHEAWLVTGYEQVRAVL-- 34 d PV r f GheaWLVT ye vRa l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################