################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:44 2021 # Report_file: c_1380_102.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00191.pdb # 2: usage_00385.pdb # 3: usage_00386.pdb # 4: usage_00387.pdb # 5: usage_00445.pdb # 6: usage_01077.pdb # 7: usage_01098.pdb # 8: usage_01099.pdb # 9: usage_01100.pdb # 10: usage_01101.pdb # 11: usage_01102.pdb # 12: usage_01269.pdb # 13: usage_01271.pdb # 14: usage_02080.pdb # 15: usage_02113.pdb # 16: usage_02114.pdb # 17: usage_02115.pdb # # Length: 69 # Identity: 38/ 69 ( 55.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 69 ( 56.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 69 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00191.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_00385.pdb 1 SWR-------EDWGQLS-G-----TGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 47 usage_00386.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_00387.pdb 1 ----------D-WGQLS-GPQSNA-GPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 47 usage_00445.pdb 1 SWR-------EDWGQLSG--------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01077.pdb 1 SWR-------EDWGQLSG--------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01098.pdb 1 SWR-------EDWGQLSG--------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01099.pdb 1 ---DWGQLSN------------A--GPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 43 usage_01100.pdb 1 SWR-------EDWGQLSG--------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01101.pdb 1 SWR-------EDWGQLS---------ARPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 44 usage_01102.pdb 1 SWR-------EDWGQLSG--------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01269.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_01271.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_02080.pdb 1 SWR-------EDWGQLS-G-----TGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 47 usage_02113.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_02114.pdb 1 SWR-------EDWGQLS-G-------PRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 45 usage_02115.pdb 1 ----------D-WGQLS-GPQSNA-GPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD 47 pRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALD usage_00191.pdb 46 VLAKRLRSM 54 usage_00385.pdb 48 VLAKRL--- 53 usage_00386.pdb 46 VLAKR---- 50 usage_00387.pdb 48 VLAKRL--- 53 usage_00445.pdb 46 VLAKRL--- 51 usage_01077.pdb 46 VLAKRL--- 51 usage_01098.pdb 46 VLAKRLRSM 54 usage_01099.pdb 44 VLAKRL--- 49 usage_01100.pdb 46 VLAKRLRSM 54 usage_01101.pdb 45 VLAKRL--- 50 usage_01102.pdb 46 VLAKRL--- 51 usage_01269.pdb 46 VLAKRLRSM 54 usage_01271.pdb 46 VLAKRL--- 51 usage_02080.pdb 48 VLAKRL--- 53 usage_02113.pdb 46 VLAKRLRSM 54 usage_02114.pdb 46 VLAKRLRSM 54 usage_02115.pdb 48 VLAKRL--- 53 VLAKR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################