################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:36 2021 # Report_file: c_0489_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00005.pdb # 2: usage_00042.pdb # 3: usage_00044.pdb # 4: usage_00061.pdb # 5: usage_00064.pdb # 6: usage_00076.pdb # 7: usage_00081.pdb # 8: usage_00155.pdb # 9: usage_00158.pdb # 10: usage_00161.pdb # 11: usage_00165.pdb # 12: usage_00168.pdb # # Length: 78 # Identity: 67/ 78 ( 85.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 78 ( 85.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 78 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 57 usage_00042.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 57 usage_00044.pdb 1 NAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 58 usage_00061.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 57 usage_00064.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 57 usage_00076.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 57 usage_00081.pdb 1 NAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAI--MRIPKDVLSEYSIDSP 58 usage_00155.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV----LAIRIPKDVLSEYSIDSP 55 usage_00158.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV----LAIRIPKDVLSEYSIDSP 55 usage_00161.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV----LAIRIPKDVLSEYSIDSP 55 usage_00165.pdb 1 NAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV----LAIRIPKDVLSEYSIDSP 56 usage_00168.pdb 1 -AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV----LAIRIPKDVLSEYSIDSP 55 AKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKV RIPKDVLSEYSIDSP usage_00005.pdb 58 TSVKLDVSSVKKILSKA- 74 usage_00042.pdb 58 TSVKLDVSSVKKILSKA- 74 usage_00044.pdb 59 TSVKLDVSSVKKILS--- 73 usage_00061.pdb 58 TSVKLDVSSVKKILSKA- 74 usage_00064.pdb 58 TSVKLDVSSVKKILSK-- 73 usage_00076.pdb 58 TSVKLDVSSVKKILSKA- 74 usage_00081.pdb 59 TSVKLDVSSVKKILSKA- 75 usage_00155.pdb 56 TSVKLDVSSVKKILSKA- 72 usage_00158.pdb 56 TSVKLDVSSVKKILSKA- 72 usage_00161.pdb 56 TSVKLDVSSVKKILSKAS 73 usage_00165.pdb 57 TSVKLDVSSVKKILSKAS 74 usage_00168.pdb 56 TSVKLDVSSVKKILSKAS 73 TSVKLDVSSVKKILS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################