################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:12 2021 # Report_file: c_1403_126.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00109.pdb # 2: usage_00461.pdb # 3: usage_00624.pdb # 4: usage_00933.pdb # 5: usage_00964.pdb # 6: usage_01211.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 67 ( 13.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 67 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 S-YKKFRQLIQ-V-N---PDILMRLS----AQMARRLQVTSEKAGNLAFLDVTGRIAQTL 50 usage_00461.pdb 1 S-YERLQQLFQTSLSPDAPRILYAIG----VQLSKRLLDTTRKASRLAFLDVTDRIVRTL 55 usage_00624.pdb 1 -AANIVAVSQD-V-L---M-------KQIHKTSQCMWLMQALGFLLSA-LQVEEILKNLH 46 usage_00933.pdb 1 --RDALRSWIA-D-R---PEISEQLL----RVLARRLRRTNNNLADLIFTDVPGRVAKQL 49 usage_00964.pdb 1 --SDMLRNWVA-D-H---PAIAEQLL----RVLARRLRRTNASLADLIFTDVPGRVAKTL 49 usage_01211.pdb 1 S-YKKFRQLIQ-V-N---PDILMRLS----AQMARRLQVTSEKVGNLAFLDATGRIAQTL 50 p rl t l dv r l usage_00109.pdb 51 LNLAK-Q 56 usage_00461.pdb 56 HDLSK-E 61 usage_00624.pdb 47 SL----- 48 usage_00933.pdb 50 LQLAQRF 56 usage_00964.pdb 50 LQLAN-R 55 usage_01211.pdb 51 LNLAK-Q 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################