################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:45 2021 # Report_file: c_1370_143.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00030.pdb # 2: usage_00056.pdb # 3: usage_00084.pdb # 4: usage_00085.pdb # 5: usage_01108.pdb # 6: usage_01266.pdb # 7: usage_01523.pdb # 8: usage_01524.pdb # # Length: 57 # Identity: 4/ 57 ( 7.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 57 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 57 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 IKGLLDVTCKTVANMIKG-KT-----PEEIRKTFNIKNDFTEEEEAQVRKENQ---- 47 usage_00056.pdb 1 IKGLLDVTCKTVANMIKG-KT-----PEEIRKTFNIKNDFTEEEEAQVRKE------ 45 usage_00084.pdb 1 -KNLLDLTCQTVADMIKG-KT-----PEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 50 usage_00085.pdb 1 -KNLLDLTCQTVADMIKG-KT-----PEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 50 usage_01108.pdb 1 LGDVTVNIYSLAVQTTFGHKTRLEQE---GRYEAA--------------FAYL---- 36 usage_01266.pdb 1 IKNLLDLTCQTVADMIKG-KT-----PEEIRTTFNIKNDFTPEEEEEVRRENQ---- 47 usage_01523.pdb 1 IKGLLDVTCKTVANMIKG-KT-----PEEIRKTFNIKNDFTEEEEAQVRKE------ 45 usage_01524.pdb 1 -KNLLDLTCQTVADMIKG-KT-----PEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 50 k lld tc tva mikG KT iR tfn e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################