################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:39 2021 # Report_file: c_0348_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00003.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00018.pdb # # Length: 119 # Identity: 26/119 ( 21.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/119 ( 43.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/119 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 THIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVL 60 usage_00011.pdb 1 RYILNVTR---E--IDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCL 55 usage_00012.pdb 1 RYILNVTR---E--IDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCL 55 usage_00013.pdb 1 RYILNVTR---E--IDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCL 55 usage_00018.pdb 1 THILNVAY---G--VENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVL 55 Ilnv i n F F Y i D t l y t FI ak g k L usage_00003.pdb 61 VHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLA 119 usage_00011.pdb 56 VHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLA 114 usage_00012.pdb 56 VHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLA 114 usage_00013.pdb 56 VHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLA 114 usage_00018.pdb 56 VHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSACPNSGFMEQLRTY------ 108 VHs GvSRsA VIay M g A yVkerR PN Fm QL eY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################