################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:50 2021 # Report_file: c_0791_84.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00073.pdb # 2: usage_00372.pdb # 3: usage_00622.pdb # 4: usage_01077.pdb # 5: usage_01243.pdb # 6: usage_01253.pdb # 7: usage_01254.pdb # 8: usage_01258.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 74 ( 5.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 74 ( 54.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 MHYLPVAIVTGATRGIGKAICQKLFQKGLSCIILGS--TKE---SIERTA-----IQ-SG 49 usage_00372.pdb 1 -----KVGI-IGYGSQGHAHALNLMDSGVDVRVGLREGD-S---DWKTAE-----E-AG- 43 usage_00622.pdb 1 ---MHVGTV--AAGRIGLAVLRRLAPFDVHLHYTDR--HRLPESVEKELNLTWHA----- 48 usage_01077.pdb 1 ------ATVFGATGFLGRYLVNHLGRMGSQVIVPYR--C------EPYDT-----M-HLR 40 usage_01243.pdb 1 ---GKVAIITGGTLGIGLAIATKFVEEGAKVMITDR--HSD---VGEKAA-----K-SVG 46 usage_01253.pdb 1 ---GKVAIVTGGTLGIGLAIADKFVEEGAKVVITGR--HAD---VGEKAA-----K-SIG 46 usage_01254.pdb 1 ---GKVAIVTGGTLGIGLAIADKFVEEGAKVVITGR--HAD---VGEKAA-----K-SIG 46 usage_01258.pdb 1 -----VCAVFGGSRGIGRAVAQLMARKGYRLAVIAR--NLE---GAKAAA-----G-DLG 44 G a g r usage_00073.pdb 50 ---L-SYQRQCAIA 59 usage_00372.pdb 44 ---LK------VTD 48 usage_00622.pdb -------------- usage_01077.pdb 41 PMGDLG--QIIFMD 52 usage_01243.pdb 47 ---TPD--QIQFFQ 55 usage_01253.pdb 47 ---GTD--VIRFVQ 55 usage_01254.pdb 47 ---GTD--VIRFVQ 55 usage_01258.pdb 45 ---GDH--L--AFS 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################