################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:42 2021 # Report_file: c_0101_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00216.pdb # 2: usage_00217.pdb # 3: usage_00238.pdb # 4: usage_00239.pdb # 5: usage_00240.pdb # 6: usage_00276.pdb # # Length: 238 # Identity: 67/238 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/238 ( 45.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/238 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 -EAMALNEKQILEKV---NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH-MG-QA 54 usage_00217.pdb 1 -EAMALNEKQILEKV---NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH-M---A 52 usage_00238.pdb 1 GYQGAMVEKKILAKV---HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 57 usage_00239.pdb 1 -YQGAMVEKKILAKV---HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 56 usage_00240.pdb 1 GYQGAMVEKKILAKV---HSRFIVSLAYAFETKTDLCLVMTIMN--DIRYHIY------- 48 usage_00276.pdb 1 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-H---G 56 A Ek iL kV srF VslaYA eTk Lclv t MN D Hiy usage_00216.pdb 55 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-Q 113 usage_00217.pdb 53 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-Q 111 usage_00238.pdb 58 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 117 usage_00239.pdb 57 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 116 usage_00240.pdb 49 --QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 106 usage_00276.pdb 57 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS-K-K 114 E ra FY A I GLE lH i YRDLKPeN LLDd G RISDLGLAv g usage_00216.pdb 114 TIKGRVGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEV 170 usage_00217.pdb 112 TIKGRVGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQ---KI--KREEV 165 usage_00238.pdb 118 KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKEL 174 usage_00239.pdb 117 KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKEL 173 usage_00240.pdb 107 KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE----ENKEL 161 usage_00276.pdb 115 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH--K-TKDKHEI 171 kg GT G MAPE e Y fS D aLG Lyemia PF E usage_00216.pdb 171 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGG----SAREVKEH------ 218 usage_00217.pdb 166 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGG----SAREVKEH------ 213 usage_00238.pdb 175 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLG----FRDGSCDGLRTHPLFRDI 228 usage_00239.pdb 174 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLG----FRDGSCDGLRTHPLFRDI 227 usage_00240.pdb 162 KQRV-------PDKFSPASKDFCEALLQKDPEKRLG----FRDGSCDGLRTHPLFRDI 208 usage_00276.pdb 172 DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGR----GAQEVKES------ 219 v FSP c LL kDp RLG s h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################