################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:25 2021 # Report_file: c_0202_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # # Length: 241 # Identity: 145/241 ( 60.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 209/241 ( 86.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/241 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITAN 60 usage_00002.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITAN 60 usage_00003.pdb 1 AGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRD 60 usage_00004.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS 60 usage_00007.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS 60 usage_00008.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS 60 usage_00018.pdb 1 AGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS 60 usage_00019.pdb 1 -GHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS 59 GHfVKMVHNGIEYGDMQLICEAYhlMKdvlG Ema aFe WNkteLDSFLiEITa usage_00001.pdb 61 ILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00002.pdb 61 ILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00003.pdb 61 ILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAVFARCLSALKNERI 120 usage_00004.pdb 61 ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00007.pdb 61 ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00008.pdb 61 ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00018.pdb 61 ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 120 usage_00019.pdb 60 ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 119 ILKFqD DGKhLlpKIrDsAGQKGTGKWTAIsALeyGvPVTLIGEAVFARCLSsLKdERI usage_00001.pdb 121 QASKKLKGP--FQ--FDGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 176 usage_00002.pdb 121 QASKKLKGP--FQ--FDGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 176 usage_00003.pdb 121 RASKVLPGPEVPKDA-VKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNP 179 usage_00004.pdb 121 QASKKLKGPQNIP--FEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 178 usage_00007.pdb 121 QASKKLKGPQNIP--FEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 178 usage_00008.pdb 121 QASKKLKGPQNIP--FEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 178 usage_00018.pdb 121 QASKKLKGPQNIP--FEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 178 usage_00019.pdb 120 QASKKLKGPQNIP--FEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYG 177 qASKkLkGP gDkksFleDirkALYASKIISYAQGFMLlRqAAtefGWtLNyg usage_00001.pdb 177 GIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQA 236 usage_00002.pdb 177 GIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQA 236 usage_00003.pdb 180 AIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNKFFADAVTKAQSGWRKSIALATTY 239 usage_00004.pdb 179 GIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQA 238 usage_00007.pdb 179 GIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQ------------- 225 usage_00008.pdb 179 GIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQA 238 usage_00018.pdb 179 GIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQ------------- 225 usage_00019.pdb 178 GIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQA 237 gIALMWRGGCIIRSVFLGkIkdAfdrnP LqNLLlddFFksAVencQ usage_00001.pdb 237 G 237 usage_00002.pdb 237 G 237 usage_00003.pdb - usage_00004.pdb 239 G 239 usage_00007.pdb - usage_00008.pdb 239 G 239 usage_00018.pdb - usage_00019.pdb 238 G 238 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################