################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:58 2021 # Report_file: c_1200_128.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00501.pdb # 2: usage_00524.pdb # 3: usage_01031.pdb # 4: usage_01035.pdb # 5: usage_01545.pdb # 6: usage_02651.pdb # 7: usage_03610.pdb # 8: usage_04428.pdb # 9: usage_04803.pdb # 10: usage_05059.pdb # 11: usage_05231.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 40 ( 72.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00501.pdb 1 -IKAID-----------GDTVKLMYK----GQPMTFRLLL 24 usage_00524.pdb 1 -IKAID-----------GDTIKLMYK----GQPMTFRL-- 22 usage_01031.pdb 1 -IKAID-----------GDTVKLMYK----GQPMTFRLLL 24 usage_01035.pdb 1 -IKAID-----------GDTVKLMYK----GQPMVFRLLL 24 usage_01545.pdb 1 -IKAID-----------GDTVKLMYK----GQPMTFRLLL 24 usage_02651.pdb 1 -IKAID-----------GDTIKLMYK----GQPMTFRLLL 24 usage_03610.pdb 1 -IKAID-----------GDTIKLMYK----GQPMTFRLLL 24 usage_04428.pdb 1 -IKAID-----------GDTVKKMYK----GQPMTFRL-- 22 usage_04803.pdb 1 -IKAID-----------GDTVKLMYK----GQPMTFRLLL 24 usage_05059.pdb 1 ------IYNLYDD----MVMDVK---SSDPSLKQIIL--- 24 usage_05231.pdb 1 VGDIKG-------RTEGKRVKDVAFQ----GKTLT----- 24 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################