################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:48 2021 # Report_file: c_1084_221.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00103.pdb # 2: usage_00425.pdb # 3: usage_00632.pdb # 4: usage_00658.pdb # 5: usage_00659.pdb # 6: usage_00673.pdb # 7: usage_01090.pdb # 8: usage_01306.pdb # # Length: 66 # Identity: 1/ 66 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 66 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 66 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 ------KDRAALSMIVEAEKRGRIKPGDVLIEAT-----SGNTGIALAMIAAL--KGYRM 47 usage_00425.pdb 1 ------KDRAALSMIVEAEKRGEIKPGDVLIEAT-----SGNTGIALAMIAAL--KGYRM 47 usage_00632.pdb 1 TSR-AGIEAVLAS---V------IEPEDDVLIPI-----YGRFGYLLTEIAER--YGANV 43 usage_00658.pdb 1 ------KDRPAVEIISRLSR-R-VEKGSLVADAT-----SSNFGVALSAVARL--YGYRA 45 usage_00659.pdb 1 ----SVADRPAVEIISRLSR-R-VEKGSLVADAT-----SSNFGVALSAVARL--YGYRA 47 usage_00673.pdb 1 --DARGAADLLTA----------A-SSVSVICHVYPDADTIGAGLALAQVLAA--SGKHV 45 usage_01090.pdb 1 -----AMETALFN---L------LEPGDSFLTGT-----NGIWGMRAAEIADR--IGARV 39 usage_01306.pdb 1 ------GLHVAAAVSHALR------PGDQLVL-G-----ASNPVRDVALAGL-DTRGIRV 41 g G usage_00103.pdb 48 KLL--- 50 usage_00425.pdb 48 KLLM-- 51 usage_00632.pdb 44 HMLECE 49 usage_00658.pdb 46 RVYLP- 50 usage_00659.pdb 48 RVYL-- 51 usage_00673.pdb 46 EVS--- 48 usage_01090.pdb 40 HQM--- 42 usage_01306.pdb 42 RSN--- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################