################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:18 2021 # Report_file: c_0723_33.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00216.pdb # 3: usage_00274.pdb # 4: usage_00275.pdb # 5: usage_00299.pdb # 6: usage_00346.pdb # 7: usage_00376.pdb # 8: usage_00377.pdb # 9: usage_00378.pdb # # Length: 60 # Identity: 16/ 60 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 60 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 60 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 HVLTVTLNPALDREI-FIEDFQVNRLYRINDLSKTQSPGGKGINVSIALSKLGVPSVATG 59 usage_00216.pdb 1 -ILTLTLNPSVDISY-PLTALKLDDVNRVQEVS--KTAGGKGLNVTRVLAQVGEPVLASG 56 usage_00274.pdb 1 -IYTVTLNPSIDYIV-QVENFQQGVVNRSERDR--KQPGGKGINVSRVLKRLGHETKALG 56 usage_00275.pdb 1 -IYTVTLNPSIDYIV-QVENFQQGVVNRSERDR--KQPGGKGINVSRVLKRLGHETKALG 56 usage_00299.pdb 1 -IYTITLNPAIDRLLFIRGELEKRKTNRVIKTE--FDCGGKGLHVSGVLSKFGIKNEALG 57 usage_00346.pdb 1 -ILTLTLNPSVDISY-PLTALKLDDVNRVQEVS--KTAGGKGLNVTRVLAQVGEPVLASG 56 usage_00376.pdb 1 -ILTLTLNPSVDISY-PLTALKLDDVNRVQEVS--KTAGGKGLNVTRVLAQVGEPVLASG 56 usage_00377.pdb 1 -ILTLTLNPSVDISY-PLTALKLDDVNRVQEVS--KTAGGKGLNVTRVLAQVGEPVLASG 56 usage_00378.pdb 1 -ILTLTLNPSVDISY-PLTALKLDDVNRVQEVS--KTAGGKGLNVTRVLAQVGEPVLASG 56 i T TLNP D nR GGKG nV vL G A G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################