################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:58 2021 # Report_file: c_1414_52.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00030.pdb # 2: usage_00080.pdb # 3: usage_00091.pdb # 4: usage_00093.pdb # 5: usage_00094.pdb # 6: usage_00095.pdb # 7: usage_00127.pdb # 8: usage_00384.pdb # 9: usage_00385.pdb # 10: usage_00560.pdb # 11: usage_00593.pdb # 12: usage_00594.pdb # # Length: 54 # Identity: 2/ 54 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 54 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 54 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 --RVRWSLETMFLKCPK-P---SLQQITHIANQLGLEKDVVRVWFCNRRQ---- 44 usage_00080.pdb 1 -TNIRVALEKSFLENQK-P---TSEEITMIADQLNMEKEVIRVWFCNRRQKE-- 47 usage_00091.pdb 1 -DDQLRVLRQYFDINNS-P---SEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 49 usage_00093.pdb 1 TPEQLEILYQKYLLDSN-P---TRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 50 usage_00094.pdb 1 SDRDLATLKKYWDNGMTSLGSVCREKIEAVATELNVDCEIVRTWIGNRRRKYRL 54 usage_00095.pdb 1 --DHMSVLKAYYAMNME-P---NSDELLKISIAVGLPQEFVKEWFEQRKVYQYS 48 usage_00127.pdb 1 LKNLLSLLKAYYALNAQ-P---SAEELSKIADSVNLPLDVVKKWFEKMQAG--- 47 usage_00384.pdb 1 -NRVRWSLETMFLKSPK-P---SLQQITHIANQLGLEKDVVRVWFSNRRQKGKR 49 usage_00385.pdb 1 ENRVRWSLETMFLKSPK-P---SLQQITHIANQLGLEKDVVRVWFSNRRQKGKR 50 usage_00560.pdb 1 ETNIRVALEKSFLENQK-P---TSEEITMIADQLNMEKEVIRVWFCNRRQKEKR 50 usage_00593.pdb 1 -TNIRVALEKSFLENQK-P---TSEEITMIADQLNMEKEVIRVWFSNRRQKEKR 49 usage_00594.pdb 1 ETNIRVALEKSFLENQK-P---TSEEITMIADQLNMEKEVIRVWFSNRRQKEKR 50 L p a Wf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################