################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:46 2021 # Report_file: c_0770_93.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00491.pdb # 2: usage_00559.pdb # 3: usage_00611.pdb # 4: usage_00612.pdb # 5: usage_00933.pdb # # Length: 76 # Identity: 6/ 76 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 76 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 76 ( 39.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00491.pdb 1 PKVAVISTGNEIVPP-GNE-LKPGQIYDINGRALCDAINELGGEGIFMGVARDDKESLKA 58 usage_00559.pdb 1 PKVGIIITGSELIEEPSEEGFKEGKIVETNSI-LQGLVEKFFGEPILYGVLPDDESIIKE 59 usage_00611.pdb 1 -KVGIIIT------------------VDTNSIMLSALVERYFGEPILYGVVPDNEDLIRS 41 usage_00612.pdb 1 PKVGIIITG------------------DTNSIMLSALVERYFGEPILYGVVPDNEDLIRS 42 usage_00933.pdb 1 PKVFITR----E-IP------------EVGIK----MLE-DEFEVEVWGDEK---EIPRE 35 KV ii n e gE i Gv usage_00491.pdb 59 LIEKAVNVGDVVVISG 74 usage_00559.pdb 60 TLEKAKNECDIVLIT- 74 usage_00611.pdb 42 ALEKAKRECDLVLIT- 56 usage_00612.pdb 43 ALEKAKRECDLVLIT- 57 usage_00933.pdb 36 ILLKKVKEVDALVTM- 50 leKa e D v i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################