################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:54:32 2021 # Report_file: c_0277_5.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00004.pdb # 2: usage_00009.pdb # 3: usage_00026.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00056.pdb # 7: usage_00060.pdb # 8: usage_00067.pdb # 9: usage_00068.pdb # 10: usage_00071.pdb # 11: usage_00080.pdb # 12: usage_00086.pdb # 13: usage_00099.pdb # 14: usage_00100.pdb # 15: usage_00127.pdb # 16: usage_00128.pdb # 17: usage_00129.pdb # 18: usage_00130.pdb # 19: usage_00138.pdb # 20: usage_00149.pdb # 21: usage_00171.pdb # 22: usage_00172.pdb # 23: usage_00173.pdb # 24: usage_00174.pdb # 25: usage_00177.pdb # 26: usage_00187.pdb # 27: usage_00188.pdb # 28: usage_00191.pdb # 29: usage_00196.pdb # 30: usage_00220.pdb # 31: usage_00221.pdb # 32: usage_00222.pdb # 33: usage_00234.pdb # 34: usage_00239.pdb # 35: usage_00273.pdb # 36: usage_00274.pdb # # Length: 109 # Identity: 18/109 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/109 ( 26.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/109 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGYSFT-GHWMNWVRQAPGKGLEWVGMIHPS-D-SE 56 usage_00009.pdb 1 -VRLVESGGGVVQPGGSLRLSCEGSGFKFG-DHGIHWVRQAPGEGLQWLTVISSD-G-TD 56 usage_00026.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFSFT-SSSVSWVRQAPGKGLEWVGLIYPY-N-GF 56 usage_00036.pdb 1 -MKLMQSGGVMVRPGESATLSCVASGFDFS-RNGFEWLRQGPGKGLQWLATVTFE-S--K 55 usage_00037.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS-AYGMGWVRQAPGKGLEWVSSIGSS-G-GG 56 usage_00056.pdb 1 -VKLVESGGGLVQPGGSLKLSCAASGFTFS-TYTMSWARQTPEKKLEWVAYISKG-G-GS 56 usage_00060.pdb 1 -VKLVESGGGLVQPGGSLRLSCATSGFTFT-DYYMSWVRQPPGKALKWLAFIRNKAKGYT 58 usage_00067.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFE-EYAMLWVRQAPGKGLEWVSGINAR-G-YT 56 usage_00068.pdb 1 -VQLQESGGGLVQPGGSLRLSCAASGFTFS-NSAMSWVRQAPGKGLEWVSSISGS-G-GN 56 usage_00071.pdb 1 -VQLVESGGGVVQPGRSLRLSCAASGFTFS-SYGMHWVRQAPGKGLEWVAVMWYD-G-SN 56 usage_00080.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTLR-SYSMNWVRQAPGKGLEWVSYISRS-S-HT 55 usage_00086.pdb 1 -VKLEESGGGLVQPGGSMKLSCAASGFTFS-DAWMDWVRQSPEKGLEWVAEIRSKVNNHA 58 usage_00099.pdb 1 -VKLQESGGGLVQPGHSLRLSCATSGFTFT-DYYMSWVRQPPGKALEWLGLIRNKANGYT 58 usage_00100.pdb 1 -VKLQESGGGLVQPGHSLRLSCATSGFTFT-DYYMSWVRQPPGKALEWLGLIRNKANGYT 58 usage_00127.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFS-SYAMSWVRQAPGKGLEWVSAISGS-G-GS 55 usage_00128.pdb 1 -VQLVESGGGVVQPGKSLRLSCAASQFSFN-RYGMHWVRQAPGKGLEWVAAISYD-G-TD 56 usage_00129.pdb 1 -VQLVESGGGLVQPGGSRKLSCAASGFTFM-RFGMHWVRQAPEKGLEWVAYISSG-S-ST 56 usage_00130.pdb 1 -VQLVESGGGLVQPGGSRKLSCAASGFTFM-RFGMHWVRQAPEKGLEWVAYISSG-S-ST 56 usage_00138.pdb 1 -LTLDESGGGLQTPGGALSLVCKASGFTFS-SYGMQWVRQAPGKGLEWVAGIQND-D-TG 56 usage_00149.pdb 1 --QLVQSGGGVVKPGASSRLSCAASGFTFT-DYYMSWIRQAPGKGLEWVAYITKD-G-SE 55 usage_00171.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFS-NYTLNWVRQAPGKGLEWVSYTSSS-G-SL 56 usage_00172.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFS-NYTLNWVRQAPGKGLEWVSYTSSS-G-SL 56 usage_00173.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFS-NYTLNWVRQAPGKGLEWVSYTSSS-G-SL 56 usage_00174.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFS-NYTLNWVRQAPGKGLEWVSYTSSS-G-SL 56 usage_00177.pdb 1 -VQLLVSGGGLVQPGGSLRLSCAASGFTFK-AYPMMWVRQAPGKGLEWVSEISPS-G-SY 56 usage_00187.pdb 1 --QLLESGGGLVKPGGSLRLSCAASGFTLI-NYRMNWVRQAPGKGLEWVSSISSS-S-SY 55 usage_00188.pdb 1 --QLLESGGGLVKPGGSLRLSCAASGFTLI-NYRMNWVRQAPGKGLEWVSSISSS-S-SY 55 usage_00191.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFS-SSYIHWVRQAPGKGLEWVAYISSY-S-GY 55 usage_00196.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNLS-SSYMHWVRQAPGKGLEWVASISSS-Y-GS 56 usage_00220.pdb 1 --QLQESGGGLMQPGGSMKLSCVASGFTFS-NYWMNWVRQSPEKGLEWVAEIRLKSNNYA 57 usage_00221.pdb 1 --QLQESGGGLMQPGGSMKLSCVASGFTFS-NYWMNWVRQSPEKGLEWVAEIRLKSNNYA 57 usage_00222.pdb 1 --QLQESGGGLMQPGGSMKLSCVASGFTFS-NYWMNWVRQSPEKGLEWVAEIRLKSNNYA 57 usage_00234.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFS-SY-ASWFRQAPGKEREIVSAVSGS-G-GS 55 usage_00239.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFS-SYDMHWVRQATGKGLEWVSAIGTA-G--D 54 usage_00273.pdb 1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYD-G--S 57 usage_00274.pdb 1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYD-G--S 57 L SGGg PG s LsC Sg W RQ p k l w usage_00004.pdb 57 TRYNQKFKDRFTISVDKSKNTLYLQMNSLRAEDTAVYYCARGIYF---- 101 usage_00009.pdb 57 ERYTDSVKGRFTISRDNSKNTMSLQMNNLRPEDMGLYYCAR-------- 97 usage_00026.pdb 57 NYYADSVKGRFTISANTSKNTAYLQMNSLRAEDTAVYYCAR-------- 97 usage_00036.pdb 56 THVTASARGRFTISRDNSRRTVYLQMTNLQPDDTAMYFC---------- 94 usage_00037.pdb 57 TAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGELL----- 100 usage_00056.pdb 57 TYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTALYYCAR-------- 97 usage_00060.pdb 59 TEYSASVKGRFTISRDNSQSFLYLQMNTLRAEDSATYYCAR-------- 99 usage_00067.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRTEDTAVYYCAKPWY----- 100 usage_00068.pdb 57 TYSADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR-------- 97 usage_00071.pdb 57 KDYVDSVKGRFTISRDNSKNTLYLQMNRLRAEDTAVYYCAREKDH-YD- 103 usage_00080.pdb 56 IFYADSVKGRFTISRDNAKNSLYLQMDSLRDEDTAMYYCARVYSS---- 100 usage_00086.pdb 59 IHYAESVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYC---------- 97 usage_00099.pdb 59 KEYSASVKGRFTISRDNSQSILYLQMNALRAEDSATYYCVR-------- 99 usage_00100.pdb 59 KEYSASVKGRFTISRDNSQSILYLQMNALRAEDSATYYCV--------- 98 usage_00127.pdb 56 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDPG----- 99 usage_00128.pdb 57 KYHADKVWGRFTISRDNSKNTLYLQMNSLRAEDTALYYCAKDLR----- 100 usage_00129.pdb 57 IYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTALYYCARSGG----- 100 usage_00130.pdb 57 IYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTALYYCARSGG----- 100 usage_00138.pdb 57 TYYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKDAS----- 100 usage_00149.pdb 56 KKYADSLQHRFAVSRDNANNLVFLQLNTVEDDDTGVYYC---------- 94 usage_00171.pdb 57 TGYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARERW----- 100 usage_00172.pdb 57 TGYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARERW----- 100 usage_00173.pdb 57 TGYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARERWH---- 101 usage_00174.pdb 57 TGYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARERWH---- 101 usage_00177.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA--------- 96 usage_00187.pdb 56 IHYADSVKGRFTISRDNAENSLYLQMNSLRAEDTAVYYCVREG------ 98 usage_00188.pdb 56 IHYADSVKGRFTISRDNAENSLYLQMNSLRAEDTAVYYCVREG------ 98 usage_00191.pdb 56 TSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTP------ 98 usage_00196.pdb 57 TYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTV------ 99 usage_00220.pdb 58 THYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGN------ 100 usage_00221.pdb 58 THYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGN------ 100 usage_00222.pdb 58 THYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGN------ 100 usage_00234.pdb 56 TYYADSVRGRFTISRDNSKNTLYLQNSLRAEDT-AVYYCAREPR----- 98 usage_00239.pdb 55 TYYPDSVKGRFTISRENAKNSLYLQMNSLRAGDTAVYYCVREGTYYHDS 103 usage_00273.pdb 58 TNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH----- 101 usage_00274.pdb 58 TNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH----- 101 R t S LQ d YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################