################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:46 2021 # Report_file: c_1189_140.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00353.pdb # 2: usage_00407.pdb # 3: usage_00672.pdb # 4: usage_00809.pdb # 5: usage_00810.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 40 ( 67.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00353.pdb 1 ----LFEADWYVHLQS-AE------------DPAVNLAIL 23 usage_00407.pdb 1 -A----------VHSA-DY--SKVLTKLSK--TYYGSVV- 23 usage_00672.pdb 1 SKVFRSTQEDKYIVCMLKE-----------NKIDAAAVI- 28 usage_00809.pdb 1 ------------TVEM-HGTDTLIVLTNKDKCVNGKVVL- 26 usage_00810.pdb 1 ------------TVEM-HGTDTLIVLTNKDKCVNGKVVL- 26 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################