################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:47 2021 # Report_file: c_1195_73.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00023.pdb # 2: usage_00166.pdb # 3: usage_00196.pdb # 4: usage_00242.pdb # 5: usage_00243.pdb # 6: usage_00252.pdb # 7: usage_00273.pdb # 8: usage_00377.pdb # 9: usage_00380.pdb # 10: usage_00438.pdb # 11: usage_00505.pdb # 12: usage_00509.pdb # 13: usage_00517.pdb # # Length: 40 # Identity: 2/ 40 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 40 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 40 ( 52.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ----VYYCARASIA----AAR---V-LDYWGRGTMVTV-- 26 usage_00166.pdb 1 ----VYYCARTWL-----LRW---V-MDLWGQGTLVTV-- 25 usage_00196.pdb 1 --TYYCARLT---------NG---Y-LDVWGAGTTVTV-- 23 usage_00242.pdb 1 ---ALYYCARGQ------------G-RPYWGQGTLVTV-- 22 usage_00243.pdb 1 ---ALYYCARGQ------------G-RPYWGQGTLVTV-- 22 usage_00252.pdb 1 ---AIYYCAARSG----GFSSNREL-YDGWGQGTQVTVSS 32 usage_00273.pdb 1 ---AVYYCARDT-------AA---Y-FDYWGQGTLVTV-- 24 usage_00377.pdb 1 ----VYYCIASSTT-GWYVRE---D-FDYWGHGTLVTV-- 29 usage_00380.pdb 1 ---AVYYCNANIEAGTYYG-----PGRDYWGQGTQVTV-- 30 usage_00438.pdb 1 ---AVYYCARKD------PSD---A-FPYWGQGTLVTV-- 25 usage_00505.pdb 1 SP-YEVKVGVYNNK----------G-EGPFSPVTTVFS-A 27 usage_00509.pdb 1 ----VYYCASRLG--VRATTG---D-LDYWGQGTLVTV-- 28 usage_00517.pdb 1 ---AVYYCASRLG--VRATTG---D-LDYWGQGTLVTV-- 29 wg gT Vtv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################