################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:05 2021 # Report_file: c_0121_28.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00006.pdb # 3: usage_00017.pdb # 4: usage_00075.pdb # 5: usage_00147.pdb # 6: usage_00473.pdb # 7: usage_00474.pdb # # Length: 118 # Identity: 80/118 ( 67.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/118 ( 70.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/118 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -KLQESGPGLVQPSQSLSITCTVSGFSLTDYGVHWVRQSPGKGLEWLGVIWSGGGTAYTA 59 usage_00006.pdb 1 -KLQESGPGLVQPSQSLSITCTVSGFSLTDYGVHWVRQSPGKGLEWLGVIWSGGGTAYTA 59 usage_00017.pdb 1 -KLQQSGPGLVQPSQSLSITCTVSGFSLTCYGVHWVRQSPGKGLEWLGVIWSGGDTDYNA 59 usage_00075.pdb 1 QLLEESGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA 60 usage_00147.pdb 1 QLLEESGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA 60 usage_00473.pdb 1 VKLQESGPGLVQPSQSLSITCTVSGFSLTDYGVHWVRQSPGKGLEWLGVIWSGGGTAYTA 60 usage_00474.pdb 1 -KLQESGPGLVQPSQSLSITCTVSGFSLTDYGVHWVRQSPGKGLEWLGVIWSGGGTAYTA 59 L eSGPGLVQPSQSLSITCTVSGFSLT YGVHWVRQSPGKGLEWLGVIWSGG T Y A usage_00004.pdb 60 AFISRLNIYKDNSKNQVFFEMNSLQANDTAMYYCARRG-SYPYNYFDVWGQGTTVTVS 116 usage_00006.pdb 60 AFISRLNIYKDNSKNQVFFEMNSLQANDTAMYYCARRG-SYPYNYFDVWGQGTTVTV- 115 usage_00017.pdb 60 AFISRLSITKDNSKSQVFFKMNSLQPNDRAIYYCARRGG-------DFWGQGTTVTV- 109 usage_00075.pdb 61 AFISRLSISKDNSKSQVFFKMNSLQADDTAIYYCARNR-GYSYAMDSWGQGTSVTVS- 116 usage_00147.pdb 61 AFISRLSISKDNSKSQVFFKMNSLQADDTAIYYCARNR-GYSYAMDSWGQGTSVTVS- 116 usage_00473.pdb 61 AFISRLNIYKDNSKNQVFFEMNSLQANDTAMYYCARRG-SYPYNYFDVWGQGTTVTVS 117 usage_00474.pdb 60 AFISRLNIYKDNSKNQVFFEMNSLQANDTAMYYCARRG-SYPYNYFDVWGQGTTVTV- 115 AFISRL I KDNSK QVFF MNSLQa DtA YYCAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################