################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:10 2021 # Report_file: c_0606_34.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_00275.pdb # 4: usage_00276.pdb # # Length: 83 # Identity: 35/ 83 ( 42.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 83 ( 42.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 83 ( 4.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 -PFVMKAWAKSYPE-NKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKV 58 usage_00139.pdb 1 -PFVMKAWAKSYPE-NKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKV 58 usage_00275.pdb 1 DAFVMGAWGRDLH-TAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVV 59 usage_00276.pdb 1 DAFVMGAWGRDLH-TAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVV 59 FVM AW V ADGSA THALGL DL G G RS R A D V usage_00138.pdb 59 KAANIEGGGEFTVSSAEDILKDL 81 usage_00139.pdb 59 KAANIEGGGEFTVSSAEDILKDL 81 usage_00275.pdb 60 KTLAVEAPGKFEVSDAASVLAT- 81 usage_00276.pdb 60 KTLAVEAPGKFEVSDAASVLAT- 81 K E G F VS A L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################