################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:25 2021 # Report_file: c_0406_80.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00014.pdb # 2: usage_00109.pdb # 3: usage_00140.pdb # 4: usage_00452.pdb # # Length: 91 # Identity: 16/ 91 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 91 ( 65.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 91 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 PLVKSEETVILQCWS--DVRFQHFLLHREGKFKDTLHLIGEHHDGVSK-ANFSIGPMMQD 57 usage_00109.pdb 1 LEFQEGETIVLRCHSWKDKPLVKVTFFQN--GKSKKFSRS--------DPNFSIPQANHS 50 usage_00140.pdb 1 LEFQEGETIMLRCHSWKDKPLVKVTFFQN--GKSQKFSRL--------DPTFSIPQANHS 50 usage_00452.pdb 1 LEFQEGETIMLRCHSWKDKPLVKVTFFQN--GKSQKFSRL--------DPTFSIPQANHS 50 lefqegETi LrChS Dkplvkvtffqn gKs kfsr p FSIpqanhs usage_00014.pdb 58 LAGTYRCYGSVTHSPYQLSAPSDPLDIVITG 88 usage_00109.pdb 51 HSGDYHCTGN-IG--YT-LYSS--------- 68 usage_00140.pdb 51 HSGDYHCTGN-IG--YT-LFSSKPVTITVQ- 76 usage_00452.pdb 51 HSGDYHCTGN-IG--YT-LFSSKPVTITVQV 77 hsGdYhCtGn ig Yt l sS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################