################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:05 2021 # Report_file: c_0827_13.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00083.pdb # 4: usage_00084.pdb # 5: usage_00085.pdb # 6: usage_00095.pdb # 7: usage_00123.pdb # 8: usage_00124.pdb # 9: usage_00125.pdb # 10: usage_00126.pdb # 11: usage_00127.pdb # 12: usage_00128.pdb # 13: usage_00129.pdb # 14: usage_00339.pdb # # Length: 82 # Identity: 26/ 82 ( 31.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 82 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 82 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 -------------NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATV 47 usage_00030.pdb 1 -------------NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATV 47 usage_00083.pdb 1 -RAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 57 usage_00084.pdb 1 -RAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 57 usage_00085.pdb 1 -RAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 57 usage_00095.pdb 1 -RAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 57 usage_00123.pdb 1 ---VEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 55 usage_00124.pdb 1 NRAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 58 usage_00125.pdb 1 NRAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 58 usage_00126.pdb 1 ---VEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 55 usage_00127.pdb 1 -RAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 57 usage_00128.pdb 1 NRAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 58 usage_00129.pdb 1 --AVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 56 usage_00339.pdb 1 NRAVEAAKKAISS-PL-LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNM 58 PL GA G L NIT G LSL E I A E usage_00029.pdb 48 KVGTVIDADMRDELHVTVVATG 69 usage_00030.pdb 48 KVGTVIDADMRDELHVTVVATG 69 usage_00083.pdb 58 IFGTVINPELQDEIVVTVIATG 79 usage_00084.pdb 58 IFGTVINPELQDEIVVTVIATG 79 usage_00085.pdb 58 IFGTVINPELQDEIVVTVI--- 76 usage_00095.pdb 58 IFGTVINPELQDEIVVTVIATG 79 usage_00123.pdb 56 IFGTVINPELQDEIVVTVIATG 77 usage_00124.pdb 59 IFGTVINPELQDEIVVTVIAT- 79 usage_00125.pdb 59 IFGTVINPELQDEIVVTVIATG 80 usage_00126.pdb 56 IFGTVINPELQDEIVVTVIATG 77 usage_00127.pdb 58 IFGTVINPELQDEIVVTVIATG 79 usage_00128.pdb 59 IFGTVINPELQDEIVVTVIATG 80 usage_00129.pdb 57 IFGTVINPELQDEIVVTVIATG 78 usage_00339.pdb 59 IFGTVINPELQDEIVVTVI--- 77 GTVI DE VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################