################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:01 2021 # Report_file: c_0773_17.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00004.pdb # 2: usage_00103.pdb # 3: usage_00365.pdb # 4: usage_00471.pdb # 5: usage_00472.pdb # 6: usage_00511.pdb # 7: usage_00512.pdb # 8: usage_00513.pdb # 9: usage_00514.pdb # 10: usage_00731.pdb # 11: usage_00859.pdb # # Length: 70 # Identity: 6/ 70 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 70 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 70 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 GKLVLVTFDDGD--LSVYRHAFPVLKKRKIPFLFFVIAGQVGRKWEGFSMC-SWEQIKEM 57 usage_00103.pdb 1 -KVVALTFNDGPNPA-TTPQVLETLAKYDIKATFFVLGKNVS--------G-NEDLVKRI 49 usage_00365.pdb 1 QKLVFLTFDDGVDPN-MTPKILDVLAQQHVHATFFLVGCNIT--------DKVKPILQRQ 51 usage_00471.pdb 1 -GTIYLTFDDGPI-N-ASIDVINVLNQEEVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00472.pdb 1 -GTIYLTFDDGPI-N-ASIDVINVLNQEEVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00511.pdb 1 -GTIYLTFDDGPV-N-ASVEVIKVLNQGGVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00512.pdb 1 -GTIYLTFDDGPV-N-ASVEVIKVLNQGGVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00513.pdb 1 -GTIYLTFDDGPV-N-ASVEVIKVLNQGGVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00514.pdb 1 -GTIYLTFDDGPV-N-ASVEVIKVLNQGGVKATFYFNAWHLDGIGD-ENEDRALEALKLA 56 usage_00731.pdb 1 -KIIYLTFDDGPG-K-YTQGLLDVLDKYNVKATFFVTNTHP---------DYQ--NIAEE 46 usage_00859.pdb 1 --MIAINFVDGPVRG-VTDRILNTLDELGVKATFSFTVNQK--AV-----GNVGQLYRRA 50 tF DG L atF usage_00004.pdb 58 VASGLCVVGL 67 usage_00103.pdb 50 KSEGHVVGN- 58 usage_00365.pdb 52 ITEGHALGI- 60 usage_00471.pdb 57 LDSGHIVAN- 65 usage_00472.pdb 57 LDSGHIVAN- 65 usage_00511.pdb 57 LDSGHIVGN- 65 usage_00512.pdb 57 LDSGHIVGN- 65 usage_00513.pdb 57 LDSGHIVGN- 65 usage_00514.pdb 57 LDSGHIVGN- 65 usage_00731.pdb 47 AKRGHTVAI- 55 usage_00859.pdb 51 VEEGHNVAL- 59 Gh v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################