################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:17:16 2021 # Report_file: c_0127_2.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00001.pdb # 2: usage_00026.pdb # 3: usage_00028.pdb # 4: usage_00034.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00043.pdb # 8: usage_00044.pdb # 9: usage_00046.pdb # 10: usage_00052.pdb # 11: usage_00053.pdb # 12: usage_00064.pdb # 13: usage_00065.pdb # 14: usage_00066.pdb # 15: usage_00067.pdb # 16: usage_00068.pdb # 17: usage_00076.pdb # 18: usage_00077.pdb # 19: usage_00078.pdb # 20: usage_00079.pdb # 21: usage_00080.pdb # 22: usage_00081.pdb # 23: usage_00082.pdb # 24: usage_00083.pdb # 25: usage_00110.pdb # 26: usage_00111.pdb # # Length: 118 # Identity: 15/118 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/118 ( 33.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/118 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTYADDFKGR 60 usage_00026.pdb 1 -SVSVSPGQTARITCSGD--ALPEKYAYWYQQKSGQAPVLIIYE-----DSKRPSGIPER 52 usage_00028.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNDVSWYQQFPGTVPKLVIYE-----NNERPSGIPDR 55 usage_00034.pdb 1 PSVSAAPGQKVTISCSGSNSDIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00037.pdb 1 PSVSAAPGQKVTISCSGSSSDIGSNYVSWYQQFPGTAPKLLIYD-----NNKRPSAIPDR 55 usage_00038.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00043.pdb 1 -SVSAAPGQKVTISCSGSSSTIGNNYVSWYRLLPGTAPKLLIYK-----NDNRPSGIPDR 54 usage_00044.pdb 1 PAVSVALGQTVRITCSGD--SLRSYYASWYQQKPGQAPVLVIYG-----ANNRPSGIPDR 53 usage_00046.pdb 1 PSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFD-----NNKRPSGTPDR 55 usage_00052.pdb 1 SSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYD-----VSKRPSGVPDR 55 usage_00053.pdb 1 SSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYD-----VSKRPSGVPDR 55 usage_00064.pdb 1 PSVSAAPGQKVTISCSGSSSNIGRSYVSWYQQVPGAAPKLLIYD-----TNKRPSGVSDR 55 usage_00065.pdb 1 PSVSAAPGQKVTISCSGSSSNIGRSYVSWYQQVPGAAPKLLIYD-----TNKRPSGVSDR 55 usage_00066.pdb 1 PSVSAAPGQKVTISCSGSSSNIGRSYVSWYQQVPGAAPKLLIYD-----TNKRPSGVSDR 55 usage_00067.pdb 1 PSVSAAPGQKVTISCSGSSSNIGRSYVSWYQQVPGAAPKLLIYD-----TNKRPSGVSDR 55 usage_00068.pdb 1 PSVSAAPGQKVTISCSGSSSNIGRSYVSWYQQVPGAAPKLLIYD-----TNKRPSGVSDR 55 usage_00076.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00077.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00078.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00079.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00080.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00081.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00082.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00083.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYD-----NNKRPSGIPDR 55 usage_00110.pdb 1 SSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYD-----VSKRPSGVPDR 55 usage_00111.pdb 1 -SVSAAPGQKVTISCSGSSSNIGNNMVSWYQQHPGTAPKLLIYE-----NSKRPSGIPDR 54 vs pGq v I Csg Wy q pG p l i rps R usage_00001.pdb 61 FAFSLETSASTAYLQINNLKNEDTATYFCVQAERLRRTF----DYWGAG-T-TVTVS- 111 usage_00026.pdb 53 FSGSRSG--TMATLTISGAQVDDEADYYCYSTNS-----GGTFFVFGTG-T-KVTV-- 99 usage_00028.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAVVFGGG-SKVTV--- 102 usage_00034.pdb 56 FSGSKSG--TSATLAITGLQAGDEADYYCGTWLY-----DRAVGLFGGG-TKVTV--- 102 usage_00037.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----RLGIAVFGGG-TQLTV--- 102 usage_00038.pdb 56 FSGSKSG--TSATLGITGLQTGDEANYYCATWDR-----RPTAYVVFGG-GTKLTV-- 103 usage_00043.pdb 55 FSGSKSG--TSATLGISGLQTGDEADYYCGTWDT-----SLSGGGVFGT-GTKVTV-- 102 usage_00044.pdb 54 FSGSSSG--NTASLTITGAQAEDEADYYCNSADS-----SGNHVVFGGG-T-KLT--- 99 usage_00046.pdb 56 FSGSKSG--TSATLVITGLQTGDEADYYCGTPDR-----SLSVVFGGGT-KVTV---- 101 usage_00052.pdb 56 FSGSKSG--NSASLDISGLQSEDEADYYCAAWDD-----SLSEFLFGTG-TKLTV--- 102 usage_00053.pdb 56 FSGSKSG--NSASLDISGLQSEDEADYYCAAWDD-----SLSEFLFGTG-TKLTV--- 102 usage_00064.pdb 56 FSGSKSG--SSASLAITGLQTGDEADYYCGAWDG-----SLNVHIFGSG-TKLTV--- 102 usage_00065.pdb 56 FSGSKSG--SSASLAITGLQTGDEADYYCGAWDG-----SLNVHIFGSG-TKLTV--- 102 usage_00066.pdb 56 FSGSKSG--SSASLAITGLQTGDEADYYCGAWDG-----SLNVHIFGSG-TKLTV--- 102 usage_00067.pdb 56 FSGSKSG--SSASLAITGLQTGDEADYYCGAWDG-----SLNVHIFGSG-TKLTV--- 102 usage_00068.pdb 56 FSGSKSG--SSASLAITGLQTGDEADYYCGAWDG-----SLNVHIFGSG-TKLTV--- 102 usage_00076.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00077.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00078.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00079.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00080.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGGGT-KLTVLG 105 usage_00081.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00082.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00083.pdb 56 FSGSKSG--TSATLGITGLQTGDEADYYCGTWDS-----SLSAYVVFGG-GTKLTV-- 103 usage_00110.pdb 56 FSGSKSG--NSASLDISGLQSEDEADYYCAAWDD-----SLSEFLFGTG-TKLTV--- 102 usage_00111.pdb 55 FSGSRSG--TSATLGIIGLQTGDEAEYYCATWDG-----SLRTVFGGGT-KLTV---- 100 FsgS sg A L I g q DeA YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################