################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:39 2021 # Report_file: c_0055_25.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00015.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00090.pdb # 5: usage_00091.pdb # 6: usage_00094.pdb # 7: usage_00150.pdb # 8: usage_00158.pdb # 9: usage_00243.pdb # # Length: 211 # Identity: 29/211 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/211 ( 33.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/211 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 NEKGLRQIIRHNIDVCKVDGLYVGGSTGENFMLSTDEKKRIFEIAKDEVKEEIKLIAQVG 60 usage_00041.pdb 1 -EKGLRQIVRYNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVG 59 usage_00042.pdb 1 -EKGLRQIVRYNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVG 59 usage_00090.pdb 1 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG 60 usage_00091.pdb 1 -EKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG 59 usage_00094.pdb 1 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG 60 usage_00150.pdb 1 -KASLRRLVQFNIQ-QGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG 58 usage_00158.pdb 1 ---EIDKIAKHLIN-DGVKGIYVCGTTGEGIHCSVEERKAIAERWVSACNHKLDIIVHTG 56 usage_00243.pdb 1 -KASLRRLVQFNIQ-QGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG 58 lr nI dGlYVgGsTGE f S E i e k i lIa vG usage_00015.pdb 61 SVNLKEAVELAKFTTDLGYDAISAVTPFYYKFD-FEEIKHYYNTIINSVD-NRLIIYSIP 118 usage_00041.pdb 60 SVNLQEAIELGKYATELGYDSLSAVTPFYYKFS-FPEIKHYYDSIIEATG-NYMIVYSIP 117 usage_00042.pdb 60 SVNLQEAIELGKYATELGYDSLSAVTPFYYKFS-FPEIKHYYDSIIEATG-NYMIVYSIP 117 usage_00090.pdb 61 SVNLKEAVELGKYATELGYDCLSAVTPFYYKFS-FPEIKHYYDTIIAETG-SNMIVYSIP 118 usage_00091.pdb 60 SVNLKEAVELGKYATELGYDCLSAVTPFYYKFS-FPEIKHYYDTIIAETG-SNMIVYSIP 117 usage_00094.pdb 61 SVNLKEAVELGKYATELGYDCLSAVTPFYYKFS-FPEIKHYYDTIIAETG-SNMIVYSI- 117 usage_00150.pdb 59 CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS-FEEHCDHYRAIIDSADGLPMVVYNIP 117 usage_00158.pdb 57 ALSIVDTLELTRHADTLDILATSAIGPCFFKPGSVSDLVEYCATIAAAAPSKGFYYYHSG 116 usage_00243.pdb 59 CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS-FEEHCDHYRAIIDSADGLPMVVYNIP 117 v e L a g d SAvtPfyy f f e y Ii Y i usage_00015.pdb 119 FLTGVDM-SLDQFGELFE-NEKIIGVKFTAADFYLLERMRKT--FPNKLIFAGFDEMMLP 174 usage_00041.pdb 118 FLTGVNI-GVEQFGELYK-NPKVLGVKFTAGDFYLLERLKKA--YPNHLIWAGFDEMMLP 173 usage_00042.pdb 118 FLTGVNI-GVEQFGELYK-NPKVLGVKFTAGDFYLLERLKKA--YPNHLIWAGFDEMMLP 173 usage_00090.pdb 119 FLTGVNM-GIEQFGELYK-NPKVLGVKFTAGDFYLLERLKKA--YPNHLIWAGFDEMMLP 174 usage_00091.pdb 118 FLTGVNM-GIEQFGELYK-NPKVLGVKFTAGDFYLLERLKKA--YPNHLIWAGFDEMMLP 173 usage_00094.pdb 118 P----NM-GIEQFGELYK-NPKVLGVKFTAGDFYLLERLKKA--YPNHLIWAGFDEMMLP 169 usage_00150.pdb 118 ALSGVKL-TLDQINTLVT-LPGVGALKQTSGDLYQMEQIRRE--HPDLVLYNGYDEIFAS 173 usage_00158.pdb 117 MSG-VNLNMEEFLIQADKRIPNLSGLKFNSGDLYEYQRCLRACD-GKFDVPFGVDEFLPG 174 usage_00243.pdb 118 ALSGVKL-TLDQINTLVT-LPGVGALKQTSGDLYQMEQIRRE--HPDLVLYNGYDEIFAS 173 q l p K t gD Y e p G DE usage_00015.pdb 175 ATVLGVDGAIGSTFNVNGVRARQIFELTKNE 205 usage_00041.pdb 174 AASLGVDGAIGSTFNVNGVRARQIFELTQAG 204 usage_00042.pdb 174 AASLGVDGAIGSTFNVNGVRARQIF------ 198 usage_00090.pdb 175 AASLGVDGAIGSTFNVNGVRARQIF------ 199 usage_00091.pdb 174 AASLGVDGAIGSTFNVNGVRARQIFELTKAG 204 usage_00094.pdb 170 AASLGVDGAIGSTFNVNGVRARQIFELTKAG 200 usage_00150.pdb 174 GLLAGADGGIGSTYNIMGWRYQGIVKALKEG 204 usage_00158.pdb 175 ALAVGAKSAVGSTYNYAA------------- 192 usage_00243.pdb 174 GLLAGADGGIGSTYNIMGWRYQGIVKALKEG 204 G dg iGST N g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################