################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:53 2021 # Report_file: c_0995_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00032.pdb # 7: usage_00215.pdb # 8: usage_00334.pdb # 9: usage_00335.pdb # 10: usage_00376.pdb # 11: usage_00399.pdb # # Length: 57 # Identity: 16/ 57 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 57 ( 31.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 57 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 DKITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 56 usage_00017.pdb 1 --ITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 54 usage_00029.pdb 1 --ITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 54 usage_00030.pdb 1 DKITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 56 usage_00031.pdb 1 --ITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIF- 53 usage_00032.pdb 1 --ITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 54 usage_00215.pdb 1 --LKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEG-ACGGSC--ACSTCHVIVD 52 usage_00334.pdb 1 --ITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACS-TCHLIFE 54 usage_00335.pdb 1 --ITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACS-TCHLIF- 53 usage_00376.pdb 1 --ITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACS-TCHLIFE 54 usage_00399.pdb 1 --LKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEG-A-CGGS-CACSTCHVIVD 52 FI DG T G LD NLD G c g TCH I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################