################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:34 2021 # Report_file: c_0886_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00040.pdb # 2: usage_00403.pdb # 3: usage_00405.pdb # 4: usage_00406.pdb # 5: usage_00454.pdb # 6: usage_00525.pdb # 7: usage_00526.pdb # # Length: 122 # Identity: 103/122 ( 84.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/122 ( 84.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/122 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 -SLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAA 59 usage_00403.pdb 1 -SLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAA 59 usage_00405.pdb 1 --LLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAA 58 usage_00406.pdb 1 ---LHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAA 57 usage_00454.pdb 1 GSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAA 60 usage_00525.pdb 1 -SLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAA 59 usage_00526.pdb 1 -SLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAA 59 LHSLVLRAQELVLQL ALQLDRQEFVCLKF ILFSLD KFLNNH LVKDAQEKANAA usage_00040.pdb 60 LLDYTLSHYPHSGDKFQQLLLSLVEVRALSMQAKEYLYHKHLGNE----MPRNNLLIEML 115 usage_00403.pdb 60 LLDYTLSHYPHSGDKFQQLLLSLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 115 usage_00405.pdb 59 LLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 114 usage_00406.pdb 58 LLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 113 usage_00454.pdb 61 LLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 116 usage_00525.pdb 60 LLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 115 usage_00526.pdb 60 LLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKH----LGNEMPRNNLLIEML 115 LLDYTL HYPH GDKFQQLLL LVEVRALSMQAKEYLYHKH MPRNNLLIEML usage_00040.pdb 116 QA 117 usage_00403.pdb 116 QA 117 usage_00405.pdb 115 Q- 115 usage_00406.pdb 114 QA 115 usage_00454.pdb 117 QA 118 usage_00525.pdb 116 QA 117 usage_00526.pdb 116 QA 117 Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################