################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:42 2021 # Report_file: c_0451_11.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00006.pdb # 4: usage_00069.pdb # 5: usage_00076.pdb # # Length: 83 # Identity: 14/ 83 ( 16.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 83 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 83 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 RNYQVIPGGKGANQAVAAARMQADVGFIACVGDDSFGINIRESFKLDGINTAGVKLQPNC 60 usage_00004.pdb 1 RNYQVIPGGKGANQAVAAARMQADVGFIACVGDDSFGINIRESFKLDGINTAGVKLQPNC 60 usage_00006.pdb 1 RNYQVIPGGKGANQAVAAARMQADVGFIACVGDDSFGINIRESFKLDGINTAGVKLQPNC 60 usage_00069.pdb 1 -LLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAP-G 58 usage_00076.pdb 1 -----HVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSA 55 gG aN aVA ar vGfia VGdD fG n E G k P usage_00003.pdb 61 PTGIAMIQVSDSG-E-NSICISA 81 usage_00004.pdb 61 PTGIAMIQVSDSG-E-NSICISA 81 usage_00006.pdb 61 PTGIAMIQVSDSG-E-NSICISA 81 usage_00069.pdb 59 FTGLYLREYLPLG-Q-GRVFY-- 77 usage_00076.pdb 56 PTGIFFIQRHYPVPLKSESIY-- 76 pTGi iq g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################