################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:58 2021 # Report_file: c_0610_58.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00298.pdb # 2: usage_00299.pdb # 3: usage_00519.pdb # 4: usage_00520.pdb # 5: usage_00662.pdb # 6: usage_00668.pdb # # Length: 82 # Identity: 12/ 82 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 82 ( 46.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 82 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00298.pdb 1 GSAVLGSVALQPVPM--DGSLALADVRAAI---APDDVHFTPTRLVCLENTH-NGKVLPL 54 usage_00299.pdb 1 GSAVLGSVALQPVPMQADGSLALADVRAAI---APDDVYFTPTRLVCLENTH-NGKVLPL 56 usage_00519.pdb 1 GAAVLGSIQPQPIDAAADGTLPLDKVAMKI---KPDDIHFARTKLLSLENTH-NGKVLPR 56 usage_00520.pdb 1 GAAVLGSIQPQPIDAAADGTLPLDKVAMKI---KPDDIHFARTKLLSLENTH-NGKVLPR 56 usage_00662.pdb 1 GAIEATGHKVVTAPC-PDGKLRVADIESALHENRSE--H-VIPKLVYISNTTEVGTQYTK 56 usage_00668.pdb 1 GAAVLGSIQPQPIDAAADGTLPLDKVAMKI---KPDDIHFARTKLLSLENTH-NGKVLPR 56 G avlgs qp DG L l v i pd h t L leNTh nGkvlp usage_00298.pdb 55 PYLREMRELVDEHGLQLHLD-- 74 usage_00299.pdb 57 PYLREMRELVDEHGLQLHLD-- 76 usage_00519.pdb 57 EYLKEAWEFTRKRNLALHVDGA 78 usage_00520.pdb 57 EYLKEAWEFTRKRNLALHVDGA 78 usage_00662.pdb 57 QELEDISASCKEHGLYLFLDGA 78 usage_00668.pdb 57 EYLKEAWEFTRKRNLALHVDGA 78 yL e e L Lh D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################