################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:36 2021 # Report_file: c_0590_35.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00108.pdb # 2: usage_00137.pdb # 3: usage_00209.pdb # 4: usage_00228.pdb # 5: usage_00269.pdb # 6: usage_00288.pdb # 7: usage_00353.pdb # # Length: 80 # Identity: 7/ 80 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 80 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 80 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 DLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDI 60 usage_00137.pdb 1 DLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDI 60 usage_00209.pdb 1 DLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTAFAKPFDI 60 usage_00228.pdb 1 DVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDI 60 usage_00269.pdb 1 DLVVLDLRLPDGNGFDLAEMIVKKEKDLPFLFLTAQAGAQERLRGFELGAAEFIPKPFHL 60 usage_00288.pdb 1 DIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDP 60 usage_00353.pdb 1 NVVL-LLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCML 59 d v d P G T GA Kp usage_00108.pdb 61 DEIRDAVKKY---------- 70 usage_00137.pdb 61 DEIRDAVKKY---------- 70 usage_00209.pdb 61 DEIRDAVKKYL--------- 71 usage_00228.pdb 61 DEAVALVERAISHYQ----- 75 usage_00269.pdb 61 KEFLIRLERVIS-------- 72 usage_00288.pdb 61 AELVQAIEAILAG------- 73 usage_00353.pdb 60 EEIELTINKAIEHRKLRKEN 79 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################