################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:03 2021 # Report_file: c_0106_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00042.pdb # 5: usage_00057.pdb # 6: usage_00058.pdb # # Length: 162 # Identity: 99/162 ( 61.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/162 ( 61.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/162 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADT 60 usage_00040.pdb 1 ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADT 60 usage_00041.pdb 1 ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADT 60 usage_00042.pdb 1 ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADT 60 usage_00057.pdb 1 ANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDET 60 usage_00058.pdb 1 ANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDET 60 ANLV A GID FY Q AGVDSVLIADVP ES PF AA GI PIFIAPP A T usage_00039.pdb 61 LKMVSEQGEGYTYLLSRAGVT-----PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIK 115 usage_00040.pdb 61 LKMVSEQGEGYTYLLSRAGVT-----PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIK 115 usage_00041.pdb 61 LKMVSEQGEGYTYLLSRAGVT-----PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIK 115 usage_00042.pdb 61 LKMVSEQGEGYTYLLSRAGVT-----PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIK 115 usage_00057.pdb 61 LRAVAQLGKGYTYLLSR----AANM-PVHALLERLQQFDAPPALLGFGISEPAQVKQAIE 115 usage_00058.pdb 61 LRAVAQLGKGYTYLLSR--------APVHALLERLQQFDAPPALLGFGISEPAQVKQAIE 112 L V G GYTYLLSR P L L F APP LLGFGI EP QV AI usage_00039.pdb 116 AGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMKAAT- 156 usage_00040.pdb 116 AGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMKAAT- 156 usage_00041.pdb 116 AGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMKAAT- 156 usage_00042.pdb 116 AGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMKAAT- 156 usage_00057.pdb 116 AGAAGAISGSAVVKIIETHLDNPAKQLTELANFTQAMKKATK 157 usage_00058.pdb 113 AGAAGAISGSAVVKIIETHLDNPAKQLTELANFTQAMKKATK 154 AGAAGAISGSAVVKIIE H A L LA FT AMK AT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################