################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:58 2021 # Report_file: c_1262_197.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00033.pdb # 2: usage_00292.pdb # 3: usage_00773.pdb # 4: usage_01588.pdb # 5: usage_01704.pdb # 6: usage_01933.pdb # # Length: 42 # Identity: 1/ 42 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 42 ( 11.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 42 ( 40.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 W-------FHGKI--SREESEQIV-LIGSKTNGKFLIR--A- 29 usage_00292.pdb 1 -KYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTY-MA---- 36 usage_00773.pdb 1 -QTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVY-LAFEIN 40 usage_01588.pdb 1 ---DQYAVFGNPINHSKSPFIHTLFARQTQQSMIY-TA---- 34 usage_01704.pdb 1 ---DQYAVFGNPINHSKSPFIHTLFARQTQQSMIY-TA---- 34 usage_01933.pdb 1 ---MKFCIIGYPVRHSISPRLYNEYFKRAGMNHSY-G----- 33 p S sp y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################