################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:46 2021 # Report_file: c_0708_42.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00346.pdb # 2: usage_00498.pdb # 3: usage_00594.pdb # 4: usage_00595.pdb # # Length: 78 # Identity: 9/ 78 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 78 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 78 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00346.pdb 1 AKVQWKVDNALQSG----NSQESVTEQDSKDSTYSLSSTLTLS-----KADYEKHKVYAC 51 usage_00498.pdb 1 -PVTVSWNSG----ALTSGVHTFPAVLQ-SSGLYSLSSVVTVPSSSLG------TQTYIC 48 usage_00594.pdb 1 -PVTVSWNSG----ALTSGVHTFPAVLQ-SSGLYSLSSVVTVP-----S-----TQTYIC 44 usage_00595.pdb 1 -PVTVSWNSG----ALTSGVHTFPAVLQ-SSGLYSLSSVVTVP-----S-----TQTYIC 44 pVtvswnsg gvhtfpavlq ssglYSLSSvvTvp tqtYiC usage_00346.pdb 52 -EVTHQGLSSPVTKS-FN 67 usage_00498.pdb 49 NVNHKPSNTKVDKRVEP- 65 usage_00594.pdb 45 NVNHKPSNTKVDKKVEP- 61 usage_00595.pdb 45 NVNHKPSNTKVDKKVEP- 61 vnhkpsntkvdkkv p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################