################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:53 2021 # Report_file: c_1473_55.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00018.pdb # 2: usage_00291.pdb # 3: usage_00603.pdb # 4: usage_01301.pdb # 5: usage_01302.pdb # 6: usage_01303.pdb # 7: usage_01304.pdb # 8: usage_01934.pdb # 9: usage_01935.pdb # 10: usage_02780.pdb # 11: usage_02781.pdb # # Length: 25 # Identity: 6/ 25 ( 24.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 25 ( 28.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 25 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -TTGVHNLYK--ANGILKVPAIN-- 20 usage_00291.pdb 1 -TTGVKNLYKRLSKGNLPISAIN-- 22 usage_00603.pdb 1 -TTGVKNLYKRLQRGKLTIPAMN-- 22 usage_01301.pdb 1 TTTGVHNLYKMMANGILKVPAIN-- 23 usage_01302.pdb 1 TTTGVHNLYKMMANGILKVPAIN-- 23 usage_01303.pdb 1 TTTGVHNLYKMMANGILKVPAIN-- 23 usage_01304.pdb 1 -TTGVHNLYKMMANGILKVPAIN-- 22 usage_01934.pdb 1 SVTGVHRLYQLSKAGKLCVPAMN-- 23 usage_01935.pdb 1 SVTGVHRLYQLSKAGKLCVPAMN-- 23 usage_02780.pdb 1 TTTGVRRLKALEETGKLRVPVIA-- 23 usage_02781.pdb 1 -TTGVRRLKALEETGKLRVPVIAVN 24 TGV L G L p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################