################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:41 2021 # Report_file: c_0743_12.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00162.pdb # 2: usage_00173.pdb # 3: usage_00176.pdb # 4: usage_00177.pdb # 5: usage_00178.pdb # # Length: 97 # Identity: 10/ 97 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 97 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 97 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00162.pdb 1 VIQLVREGAIATVTLNRPDRNALNLPWRGLAEAFETISADRSIHVVILRGAGTKAFAPGA 60 usage_00173.pdb 1 -LGEVLSEGVLTLTLGRAPAHPLSRAIAALHDALRRA-GDDHVHVLVIHGPGR-IFCAGH 57 usage_00176.pdb 1 -LSVRVEDHIAVATLNHAPANASSQ-VHDVTELIDQVEKDDNIRVVVIHGEGR-FFSAGA 57 usage_00177.pdb 1 FLSVRVEDHIAVATLNHAPANASSQ-VHDVTELIDQVEKDDNIRVVVIHGEGR-FFSAGA 58 usage_00178.pdb 1 -LSVRVEDHIAVATLNHAPANASSQ-VHDVTELIDQVEKDDNIRVVVIHGEGR-FFSAGA 57 l e ia TLn apana s e Dd i VvvihG Gr F aGa usage_00162.pdb 61 DIEEFD--TLRA---NAEQAKAYDLV-RKALDTVRAC 91 usage_00173.pdb 58 DLKE--------IGEGRAFVTDLFEACSALLDLAHC- 85 usage_00176.pdb 58 DIKEFTSV---T---EAKQATELAQLGQVTFERVEKC 88 usage_00177.pdb 59 DIKEFTSV---T---EAKQATELAQLGQVTFERVEKC 89 usage_00178.pdb 58 DIKEFT-S---T---EAKQATELAQLGQVTFERVE-- 85 DikE a qat l v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################