################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:47 2021 # Report_file: c_1089_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00063.pdb # 2: usage_00209.pdb # 3: usage_00210.pdb # 4: usage_00211.pdb # 5: usage_00212.pdb # 6: usage_00213.pdb # 7: usage_00214.pdb # 8: usage_00579.pdb # # Length: 60 # Identity: 35/ 60 ( 58.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 60 ( 90.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 60 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 --KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF-TRPKVAFY 57 usage_00209.pdb 1 ----TDFFSWRRTLLRFQRETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 55 usage_00210.pdb 1 ----FFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 55 usage_00211.pdb 1 ----FFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 55 usage_00212.pdb 1 QDTDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 59 usage_00213.pdb 1 ----FFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 55 usage_00214.pdb 1 QDTDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 59 usage_00579.pdb 1 ----FFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFY 55 ffswrrtmlLrfqrmETAEEVYHEIELQAQQLEYDYYSLCV rhpvp TRPKVAFY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################