################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:28 2021 # Report_file: c_0395_58.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00012.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00146.pdb # 5: usage_00322.pdb # 6: usage_00341.pdb # 7: usage_00405.pdb # 8: usage_00464.pdb # 9: usage_00588.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 74 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 74 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -GLTFDAFSSQLCWVDAG-THRAECLNPAQPGRRKV--LEGL--QYPFAVTSYG--KNLY 52 usage_00030.pdb 1 -ALDFDVTDNRIYWTDIS-LKTISRAFMNG-SALEHVVEFGL--DYPEGMAVDWLGKNLY 55 usage_00031.pdb 1 -ALALDPAEGFMYWTEWGGKPKIDRAAMDG-SERTTLV-PNV--GRANGLTIDYAKRRLY 55 usage_00146.pdb 1 IALDFHHRRELVFWSDVT-LDRILRANLNG-SNVEEVVSTGL--ESPGGLAVDWVHDKLY 56 usage_00322.pdb 1 -ALALDPAEGFMYWTEWGGKPKIDRAAMDG-SERTTLV-PNV--GRANGLTIDYAKRRLY 55 usage_00341.pdb 1 -YGITEGPNGDIWFTEMN-GNRIGRITD-D-GKIREYE-LPNKGSYPSFITLG-SDNALW 54 usage_00405.pdb 1 -AIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENI--QWPNGITLDLLSGRLY 56 usage_00464.pdb 1 -ALALDPAEGFMYWTEWGGKPKIDRAAMDG-SERTTLV-PNV--GRANGLTIDYAKRRLY 55 usage_00588.pdb 1 -AIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENI--QWPNGITLDLLSGRLY 56 w i Ly usage_00012.pdb 53 YTDWKTNSVIAMD- 65 usage_00030.pdb 56 WADTGTNRIEVSK- 68 usage_00031.pdb 56 WTDLDTNLIESSN- 68 usage_00146.pdb 57 WTDSGTSRIEVAN- 69 usage_00322.pdb 56 WTDLDTNLIESSN- 68 usage_00341.pdb 55 FTENQNNAIGRITE 68 usage_00405.pdb 57 WVDSKLHSISSID- 69 usage_00464.pdb 56 WTDLDTNLIESSN- 68 usage_00588.pdb 57 WVDSKLHSISSID- 69 d i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################