################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:14 2021 # Report_file: c_1095_7.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00102.pdb # 2: usage_00119.pdb # 3: usage_00240.pdb # 4: usage_00271.pdb # 5: usage_00272.pdb # 6: usage_00462.pdb # # Length: 95 # Identity: 22/ 95 ( 23.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 95 ( 38.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 95 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 ----------GPECDEWSAGVMMYVLLCGYPPFSAPTD--------EVMLKIREGTFTFP 42 usage_00119.pdb 1 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA-NG---PDDTPEEILARIGSGKFSLS 56 usage_00240.pdb 1 -----KRQGYDEGCDIWSLGILLYTMLAGYTPFA-NG---PSDTPEEILTRIGSGKFTLS 51 usage_00271.pdb 1 --EVLERQGYDAACDIWSLGVLLYTMLTGYTPFA-NG---PDDTPEEILARIGSGKFSLS 54 usage_00272.pdb 1 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA-NG---PDDTPEEILARIGSGKFSLS 56 usage_00462.pdb 1 ---------YNRAVDCWSLGVILFICLSGYPPFSE---HRTQV---SLKDQITSGKYNFI 45 cD WSlGv ly L GY PF e I sGkf usage_00102.pdb 43 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 77 usage_00119.pdb 57 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 91 usage_00240.pdb 52 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 86 usage_00271.pdb 55 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 89 usage_00272.pdb 57 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 91 usage_00462.pdb 46 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 80 W VS A dLv k L vdP qR T L H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################