################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:08 2021 # Report_file: c_1172_209.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00527.pdb # 2: usage_00953.pdb # 3: usage_00954.pdb # 4: usage_00955.pdb # 5: usage_00956.pdb # 6: usage_00972.pdb # 7: usage_01793.pdb # 8: usage_01877.pdb # 9: usage_02449.pdb # 10: usage_02756.pdb # 11: usage_02835.pdb # 12: usage_02865.pdb # 13: usage_03601.pdb # 14: usage_04642.pdb # 15: usage_04798.pdb # # Length: 37 # Identity: 0/ 37 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 37 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 37 ( 45.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00527.pdb 1 -RVASMAS-E-KMKILELPFASGT--MSMLVLLP--- 29 usage_00953.pdb 1 -PVLIMEK-M-NFKMIELPYVKRE--LSMFILLP--- 29 usage_00954.pdb 1 -PVLIMEK-M-NFKMIELPYVKRE--LSMFILLP--- 29 usage_00955.pdb 1 -PVLIMEK-M-NFKMIELPYVKRE--LSMFILLP--- 29 usage_00956.pdb 1 -PVLIMEK-M-NFKMIELPYVKRE--LSMFILLP--- 29 usage_00972.pdb 1 -AKKELPS-G-E-FIGIVLKH-VG-YQSMVYVCI-P- 29 usage_01793.pdb 1 -KVATVAA-E-KMKILELPYASGE--LSMFVLLP--- 29 usage_01877.pdb 1 -RVASMAS-E-KMKILELPFAGTMS-MLVLLP----- 28 usage_02449.pdb 1 --MGNIDS-I-N-KIIELPFQNKH--LSMFILLP--- 27 usage_02756.pdb 1 -CMGNIDS-I-NCKIIELPFQNKH--LSMFILLP--- 29 usage_02835.pdb 1 -HFASLED-V-QAKVLEIPYKGKD--LSMIVLLP--- 29 usage_02865.pdb 1 -ASTFDKN-F-RCHVLKLPYQGNAT-MLVVLM----- 28 usage_03601.pdb 1 -LHIWPHG-DYMCIALPNLD-------RSFTVTLFLH 28 usage_04642.pdb 1 TKALCNIVNNKMVHFDLLHE---D--VSLQYFIP--- 29 usage_04798.pdb 1 -HFASLED-V-QAKVLEIPYKGKD--LSMIVLLP--- 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################