################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:02 2021 # Report_file: c_0028_13.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00042.pdb # 2: usage_00060.pdb # 3: usage_00061.pdb # 4: usage_00065.pdb # 5: usage_00145.pdb # 6: usage_00146.pdb # # Length: 189 # Identity: 23/189 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/189 ( 78.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/189 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ETVKLNREPINSV-LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM 58 usage_00060.pdb 1 ETVKLNREPINSV-LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM 58 usage_00061.pdb 1 ETVKLNREPINSV-LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM 58 usage_00065.pdb 1 GLRELARLPGFGFVSDIR--GDLIAGLGFFG--GGRVSLFTSNLSSGG-LRVFDS--GEG 53 usage_00145.pdb 1 ETVKLNREPINSV-LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM 58 usage_00146.pdb 1 ETVKLNREPINSV-LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM 58 etvkLnRePinsv lDph vgrvilvrdvs aeqhaLFkvNtSrpG eqrlea pm usage_00042.pdb 59 RILSGVDT--GEAVVFTGATEDRVALYALD-GGGLRELARLP-----------GFG-FVS 103 usage_00060.pdb 59 RILSGVDT--GEAVVFTGATEDRVALYALD-GGGLRELARLP-----------GFG-FVS 103 usage_00061.pdb 59 RILSGVDT--GEAVVFTGATEDRVALYALD-GGGLRELARLP-----------GFG-FVS 103 usage_00065.pdb 54 SFSSASISPGM-KVTAGLETAREARLVTVDPRDGSVEDLE--LPSKDFSSYRPTAITWLG 110 usage_00145.pdb 59 RILSGVDT--GEAVVFTGATEDRVALYALD-GGGLRELARLP-----------GFG-FVS 103 usage_00146.pdb 59 RILSGVDT--GEAVVFTGATEDRVALYALD-GGGLRELARLP-----------GFG-FVS 103 rilSgvdt g aVvftgaTedrvaLyalD ggGlrElar gfg fvs usage_00042.pdb 104 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 162 usage_00060.pdb 104 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 162 usage_00061.pdb 104 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 162 usage_00065.pdb 111 YLPDGRLAVVARR--EGRSAVFID------GERVEAPQGNHGRVVLW-RGKLVTSHTSLS 161 usage_00145.pdb 104 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 162 usage_00146.pdb 104 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 162 dirgdliAglgff g RvslFts lrvfdsgeGsfssasis gmKvtagletar usage_00042.pdb 163 -EARLVTVD 170 usage_00060.pdb 163 -EARLVTVD 170 usage_00061.pdb 163 -EARLVTVD 170 usage_00065.pdb 162 TPPRIVS-- 168 usage_00145.pdb 163 -EARLVTVD 170 usage_00146.pdb 163 -EARLVTVD 170 eaRlVt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################