################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:21:30 2021 # Report_file: c_0327_7.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00011.pdb # 3: usage_00019.pdb # 4: usage_00024.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00035.pdb # 9: usage_00036.pdb # 10: usage_00037.pdb # 11: usage_00038.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # 14: usage_00069.pdb # 15: usage_00071.pdb # # Length: 128 # Identity: 101/128 ( 78.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/128 ( 81.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/128 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------RELFQAFRTADVGRELIIDQNAFIEQVLPKGVVRPLTEVEMDHYREPFLKPVD 53 usage_00011.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGALPKYVVRPLTEVEMDHYREPFLKPVD 53 usage_00019.pdb 1 QDHAEAARETFQAFRTADVGRELIIDQNAFIERVLPGGVVRPLTEVEMDHYREPFLKPVD 60 usage_00024.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVD 53 usage_00032.pdb 1 --------ETFQAFRTADVGRELIIDQNAFIEGALP-GVVRPLTEVE-DHYREPFLKPVD 50 usage_00033.pdb 1 ---PEFARETFQAFRTADVGRELIIDQNAFIEGALP-GVVRPLTEVE-DHYREPFLKPVD 55 usage_00034.pdb 1 ---PEFARETFQAFRTADVGRELIIDQNAFIEGALP-GVVRPLTEVE-DHYREPFLKPVD 55 usage_00035.pdb 1 -------RETFQAFRTTDVGRKLIIDQNVFIEGTLP-GVVRPLTEVE-DHYREPFLNPVD 51 usage_00036.pdb 1 -------RETFQAFRTTDVGRKLIIDQNVFIEGTLP-GVVRPLTEVE-DHYREPFLNPVD 51 usage_00037.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGALP-GVVRPLTEVE-DHYREPFLKPVD 51 usage_00038.pdb 1 ---PEFARETFQAFRTADVGRELIIDQNAFIEGALP-GVVRPLTEVE-DHYREPFLKPVD 55 usage_00061.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVD 53 usage_00062.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVD 53 usage_00069.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGALPKYVVRPLTEVEMDHYREPFLKPVD 53 usage_00071.pdb 1 -------RETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVD 53 EtFQAFRT DVGR LIIDQN FIE LP VVRPLTEVE DHYREPFL PVD usage_00001.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 usage_00011.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 usage_00019.pdb 61 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGALIPPAEAARLAES 120 usage_00024.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 usage_00032.pdb 51 REPLWRFPNELPIAGEPANIVALVEAY-NWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 109 usage_00033.pdb 56 REPLWRFPNELPIAGEPANIVALVEAY-NWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 114 usage_00034.pdb 56 REPLWRFPNELPIAGEPANIVALVEAY-NWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 114 usage_00035.pdb 52 REPLWRFPNELPIAGEPANIVALVEEY-DWLHQSPVPKLLFWGTPGVLIPPAEAARLAKS 110 usage_00036.pdb 52 REPLWRFPNELPIAGEPANIVALVEEY-DWLHQSPVPKLLFWGTPGVLIPPAEAARLAKS 110 usage_00037.pdb 52 REPLWRLPNELPIAGEPANIVALVEAY-NWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 110 usage_00038.pdb 56 REPLWRLPNELPIAGEPANIVALVEAY-NWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 114 usage_00061.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 usage_00062.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 usage_00069.pdb 54 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGFIIPPAEAARLAES 113 usage_00071.pdb 54 REPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 113 REPLWR PNElPIAGEPANIVALVE Y WLHQSPVPKLLFWGTPG lIPPAEAARLA S usage_00001.pdb 114 LPNCKTVD 121 usage_00011.pdb 114 LPNCKTVD 121 usage_00019.pdb 121 LPNCKTVD 128 usage_00024.pdb 114 LPNCKTVD 121 usage_00032.pdb 110 LPNCKTVD 117 usage_00033.pdb 115 LPNCKTVD 122 usage_00034.pdb 115 LPNCKTVD 122 usage_00035.pdb 111 LPNCKAVD 118 usage_00036.pdb 111 LPNCKAVD 118 usage_00037.pdb 111 LPNCKTVD 118 usage_00038.pdb 115 LPNCKTVD 122 usage_00061.pdb 114 LPNCKTVD 121 usage_00062.pdb 114 LPNCKTVD 121 usage_00069.pdb 114 LPNCKTVD 121 usage_00071.pdb 114 LPNCKTVD 121 LPNCK VD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################