################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:22 2021 # Report_file: c_1234_66.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00565.pdb # 2: usage_00665.pdb # 3: usage_00666.pdb # 4: usage_00667.pdb # 5: usage_00668.pdb # 6: usage_01394.pdb # 7: usage_01451.pdb # 8: usage_01647.pdb # 9: usage_01677.pdb # # Length: 43 # Identity: 2/ 43 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 43 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 43 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00565.pdb 1 ---IGAVVIFSK--DQTMGEV----EHKAVETAAGFLARQME- 33 usage_00665.pdb 1 APIVFIVYTTMR--NP-----NAQARDDVIASATRIAARAFA- 35 usage_00666.pdb 1 APIVLAVYYTQT--RA-----DAKAKDDVIAAATRIASATLA- 35 usage_00667.pdb 1 APIVLAVYYTQT--RA-----DAKAKDDVIAAATRIASATLA- 35 usage_00668.pdb 1 APIVLAVYYTQT--RA-----DAKAKDDVIAAATRIASATLA- 35 usage_01394.pdb 1 APIVLAVSFTQA--QA-----DAAARADVVASAARIATGALT- 35 usage_01451.pdb 1 APIVLAVSFTQP--RA-----DAAARADVVASAARIATGALTA 36 usage_01647.pdb 1 APIVFIVYTTMR--NP-----NAQARDDVIASATRIAARAFA- 35 usage_01677.pdb 1 VPYVVAVMSDRAGGGY-----DAEPREALLAEAATCVAGVLA- 37 v V a A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################