################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:29 2021 # Report_file: c_1212_117.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00439.pdb # 4: usage_00440.pdb # 5: usage_00562.pdb # 6: usage_00563.pdb # 7: usage_00564.pdb # 8: usage_00565.pdb # 9: usage_00771.pdb # 10: usage_00772.pdb # 11: usage_00816.pdb # 12: usage_00819.pdb # 13: usage_01096.pdb # 14: usage_01215.pdb # 15: usage_01216.pdb # # Length: 42 # Identity: 3/ 42 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 42 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 42 ( 73.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 DYIVRDGEVLIVDEFTGRV----LIGRRYNEGMHQAIEAKEH 38 usage_00029.pdb 1 -YIVRDGEVLIVDEFTGRV----LIGRRYNEGMHQAIEAKEH 37 usage_00439.pdb 1 DYVVEDGQVVIVDSFTGRL----MKGRRYSEGLHQAIEAKEG 38 usage_00440.pdb 1 DYVVEDGQVVIVDSFTGRL----MKGRRYSEGLHQAIEAKEG 38 usage_00562.pdb 1 DYIVQDGQVIIVDEFTGRL----MPGRRYGEGLHQAIEAKEG 38 usage_00563.pdb 1 DYIVQDGQVIIVDEFTGRL----MPGRRYGEGLHQAIEAKEG 38 usage_00564.pdb 1 DYIVQDGQVIIVDEFTGRL----MPGRRYGEGLHQAIEAKEG 38 usage_00565.pdb 1 DYIVQDGQVIIVDEFTGRL----MPGRRYGEGLHQAIEAKEG 38 usage_00771.pdb 1 DYVVMNGEVIIVDEFTGRLLPGR------------------- 23 usage_00772.pdb 1 DYVVEDGQVVIVDSFTGRL----MKGRRYSEGLHQAIEAKEG 38 usage_00816.pdb 1 DYVVEDGQVVIVDSFTGRL----MKGRRYSEGLHQAIEAKE- 37 usage_00819.pdb 1 DYVVEDGQVVIVDSFTGRL----MKGRRYSEGLHQAIEAKE- 37 usage_01096.pdb 1 HYIVRDDAVHLI----------------WPDGLQAAVEAKEG 26 usage_01215.pdb 1 DYIVRDGEVLIVDEFTGRV----LIGRRYNEGMHQAIEAKEH 38 usage_01216.pdb 1 DYIVRDGEVLIVDEFTGRV----LIGRRYNEGMHQAIEAKEH 38 Y V dg V iv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################