################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:11:21 2021 # Report_file: c_0424_3.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # 9: usage_00020.pdb # 10: usage_00021.pdb # 11: usage_00022.pdb # 12: usage_00023.pdb # 13: usage_00026.pdb # 14: usage_00027.pdb # 15: usage_00028.pdb # 16: usage_00029.pdb # 17: usage_00030.pdb # 18: usage_00031.pdb # 19: usage_00037.pdb # # Length: 89 # Identity: 13/ 89 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 89 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 89 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --------LSWSTCKS--SCTTNSGAITLDANWRWVHGVNTSTNCYTGNTWNSAICDTDA 50 usage_00008.pdb 1 --------LTTYKCTKSGGCVAQDTSVVLDWNYRWMHD-ANYNSCTVNGGVNTTLCPDEA 51 usage_00009.pdb 1 --------LTTYKCTKSGGCVAQDTSVVLDWNYRWMHD-ANYNSCTVNGGVNTTLCPDEA 51 usage_00015.pdb 1 ------PPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLCPDNE 54 usage_00016.pdb 1 ------PQLQSQQCTTSGGCKPLSTKVVLDSNWRWVHSTSGYTNCYTGNEWDTSLCPDGK 54 usage_00017.pdb 1 --------ITWQECADDGSCKTMNGEIVIDANWRWVHS-EQGTNCYTGNTWNPTLCPDDK 51 usage_00018.pdb 1 --------LTWQTCTSGGSCTTNNGKVVLDANWRWLHSTSGSTNCYTGNTWNTTLCPDDT 52 usage_00019.pdb 1 LTTETHPPLTWQTCTSGGSCTTNNGKVVLDANWRWLHSTSGSTNCYTGNTWNTTLCPDDT 60 usage_00020.pdb 1 --------LTVSQCSAGGSCTTESRSVVLDSNWRWLHTTSGTTNCYTGNTWDASLCPDPV 52 usage_00021.pdb 1 ------PPLTWQKCTA-SGCTPQQGSVVLDANWRWTHDTKSTTNCYDGNTWSSTLCPDDA 53 usage_00022.pdb 1 --------LQSQQCTTSGGCKPLSTKVVLDSNWRWVHSTSGYTNCYTGNEWDTSLCPDGK 52 usage_00023.pdb 1 NTAENHPQLQSQQCTTSGGCKPLSTKVVLDSNWRWVHSTSGYTNCYTGNEWDTSLCPDGK 60 usage_00026.pdb 1 --------LTWQECTAPGSCTTQNGAVVLDANWRWVHDVNGYTNCYTGNTWDPTYCPDDE 52 usage_00027.pdb 1 --------LTWQECTAPGSCTTQNGAVVLDANWRWVHDVNGYTNCYTGNTWDPTYCPDDE 52 usage_00028.pdb 1 --------LTWQECTAPGSCTTQNGAVVLDANWRWVHDVNGYTNCYTGNTWDPTYCPDDE 52 usage_00029.pdb 1 --------LTWQECTAPGSCTTQNGAVVLDANWRWVHDVNGYTNCYTGNTWDPTYCPDDE 52 usage_00030.pdb 1 ------PSMTWQSCTAGGSCTTNNGKVVIDANWRWVHKVGDYTNCYTGNTWDTTICPDDA 54 usage_00031.pdb 1 --------MTWQSCTAGGSCTTNNGKVVIDANWRWVHKVGDYTNCYTGNTWDTTICPDDA 52 usage_00037.pdb 1 NTAENHPQLQSQQCTTSGGCKPLSTKVVLDSNWRWVHSTSGYTNCYTGNEWDTSLCPDGK 60 C C v D N RW H C Cpd usage_00001.pdb 51 SCAQDCALDGADYSGTYGITTSGNSLRLN 79 usage_00008.pdb 52 TCGKNCFIEGVDYAASGVTTS-GSSLTMN 79 usage_00009.pdb 52 TCGKNCFIEGVDYAASGVTTS-GSSLTMN 79 usage_00015.pdb 55 TCAKNCCLDGAAYASTYGVTTSGNSLSIG 83 usage_00016.pdb 55 TCAANCALDGADYSGTYGITSTGTALTLK 83 usage_00017.pdb 52 TCAENCYLDGANYESVYGITTEDDSVRLN 80 usage_00018.pdb 53 TCAQNCALDGADYEGTYGITASGNSLRLN 81 usage_00019.pdb 61 TCAQNCALDGADYEGTYGITASGNSLRLN 89 usage_00020.pdb 53 TCAQNCALDGADYSGTYGISTSGNALTLK 81 usage_00021.pdb 54 TCAKNCCLDGANYSGTYGVTTSGDALTLQ 82 usage_00022.pdb 53 TCAANCALDGADYSGTYGITSTGTALTLK 81 usage_00023.pdb 61 TCAANCALDGADYSGTYGITSTGTALTLK 89 usage_00026.pdb 53 TCAQNCALDGADYEGTYGVTSSGSSLKLN 81 usage_00027.pdb 53 TCAQNCALDGADYEGTYGVTSSGSSLKLN 81 usage_00028.pdb 53 TCAQNCALDGADYEGTYGVTSSGSSLKLN 81 usage_00029.pdb 53 TCAQNCALDGADYEGTYGVTSSGSSLKLN 81 usage_00030.pdb 55 TCASNCALEGANYESTYGVTASGNSLRLN 83 usage_00031.pdb 53 TCASNCALEGANYESTYGVTASGNSLRLN 81 usage_00037.pdb 61 TCAANCALDGADYSGTYGITSTGTALTLK 89 tC nC G Y t g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################