################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:58 2021 # Report_file: c_0505_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00204.pdb # 3: usage_00228.pdb # 4: usage_00229.pdb # 5: usage_00245.pdb # 6: usage_00250.pdb # 7: usage_00251.pdb # # Length: 89 # Identity: 33/ 89 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 89 ( 57.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 89 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDS 60 usage_00204.pdb 1 PESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS-RGCITIIGGGDT 59 usage_00228.pdb 1 PESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS-RGCITIIGGGDT 59 usage_00229.pdb 1 PESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS-RGCITIIGGGDT 59 usage_00245.pdb 1 PKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQ---PGVKSIIGGGDS 57 usage_00250.pdb 1 PESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS-RGCITIIGGGDT 59 usage_00251.pdb 1 PESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS-RGCITIIGGGDT 59 P s Ky ea t aK vWNGP GVFE f GT a md vk G IIGGGD usage_00001.pdb 61 ASAAELSGEAKRMSHVSTGGGASLELLEG 89 usage_00204.pdb 60 ATCCAKWNTEDKVSHVSTGGGASLELLE- 87 usage_00228.pdb 60 ATCCAKWNTEDKVSHVSTGGGASLELLEG 88 usage_00229.pdb 60 ATCCAKWNTEDKVSHVSTGGGASLELLEG 88 usage_00245.pdb 58 AAAAINLGRADKFSWISTGGGASMELLEG 86 usage_00250.pdb 60 ATCCAKWNTEDKVSHVSTGGGASLELLE- 87 usage_00251.pdb 60 ATCCAKWNTEDKVSHVSTGGGASLELLE- 87 A dk ShvSTGGGASlELLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################