################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:14 2021 # Report_file: c_1413_56.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00003.pdb # 2: usage_00341.pdb # 3: usage_00369.pdb # 4: usage_00370.pdb # 5: usage_00959.pdb # 6: usage_00960.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 75 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 75 ( 70.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 SYKEAIHIFLPGTKNEQVRQLLCLYYAHYNR-NAKQ----LWSDAHKK----G------- 44 usage_00341.pdb 1 ------------------PVHKFITALKS-TGL--RTSDPRLKECMD-MLRLTLVML-DK 37 usage_00369.pdb 1 ------------------PAVKRDVDLFL-T-G--T----PDEYVEQ-VAQYK---ALPV 30 usage_00370.pdb 1 ------------------PAVKRDVDLFL-T-G--T----PDEYVEQ-VAQYK---ALPV 30 usage_00959.pdb 1 ------------------PAVKRDVDLFL-T-G--T----PDEYVEQ-VAQYK---ALPV 30 usage_00960.pdb 1 ------------------PAVKRDVDLFL-T-G--T----PDEYVEQ-VAQYK---ALPV 30 p k l t usage_00003.pdb --------------- usage_00341.pdb 38 DLFKKCV-------- 44 usage_00369.pdb 31 VLENARILKNCVDAK 45 usage_00370.pdb 31 VLENARILKNCVDA- 44 usage_00959.pdb 31 VLENARILKNCVDA- 44 usage_00960.pdb 31 VLENARILKNCVDAK 45 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################