################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:07:31 2021 # Report_file: c_0514_50.html ################################################################################################ #==================================== # Aligned_structures: 57 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00034.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00050.pdb # 7: usage_00090.pdb # 8: usage_00091.pdb # 9: usage_00117.pdb # 10: usage_00134.pdb # 11: usage_00147.pdb # 12: usage_00168.pdb # 13: usage_00169.pdb # 14: usage_00170.pdb # 15: usage_00171.pdb # 16: usage_00186.pdb # 17: usage_00238.pdb # 18: usage_00261.pdb # 19: usage_00262.pdb # 20: usage_00268.pdb # 21: usage_00269.pdb # 22: usage_00270.pdb # 23: usage_00271.pdb # 24: usage_00272.pdb # 25: usage_00292.pdb # 26: usage_00317.pdb # 27: usage_00336.pdb # 28: usage_00337.pdb # 29: usage_00338.pdb # 30: usage_00339.pdb # 31: usage_00354.pdb # 32: usage_00355.pdb # 33: usage_00405.pdb # 34: usage_00406.pdb # 35: usage_00407.pdb # 36: usage_00419.pdb # 37: usage_00427.pdb # 38: usage_00483.pdb # 39: usage_00486.pdb # 40: usage_00487.pdb # 41: usage_00499.pdb # 42: usage_00500.pdb # 43: usage_00501.pdb # 44: usage_00510.pdb # 45: usage_00511.pdb # 46: usage_00512.pdb # 47: usage_00513.pdb # 48: usage_00514.pdb # 49: usage_00515.pdb # 50: usage_00516.pdb # 51: usage_00517.pdb # 52: usage_00555.pdb # 53: usage_00560.pdb # 54: usage_00561.pdb # 55: usage_00641.pdb # 56: usage_00664.pdb # 57: usage_00667.pdb # # Length: 110 # Identity: 28/110 ( 25.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/110 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/110 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00024.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00034.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00046.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00047.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00050.pdb 1 ---MRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 54 usage_00090.pdb 1 -SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKSDL 56 usage_00091.pdb 1 -SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKSDL 56 usage_00117.pdb 1 -----DQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKCDL 52 usage_00134.pdb 1 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 57 usage_00147.pdb 1 --------MRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 49 usage_00168.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00169.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00170.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00171.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00186.pdb 1 ----RTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 56 usage_00238.pdb 1 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 57 usage_00261.pdb 1 -SAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 56 usage_00262.pdb 1 -SAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 56 usage_00268.pdb 1 -SAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 56 usage_00269.pdb 1 --AMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 55 usage_00270.pdb 1 -SAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 56 usage_00271.pdb 1 -SAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 56 usage_00272.pdb 1 YSAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 57 usage_00292.pdb 1 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 57 usage_00317.pdb 1 -----DQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 52 usage_00336.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00337.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00338.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00339.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00354.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00355.pdb 1 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 57 usage_00405.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00406.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00407.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00419.pdb 1 ---MRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDV---PMVLVGNKSDL 54 usage_00427.pdb 1 -SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 56 usage_00483.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00486.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00487.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00499.pdb 1 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 57 usage_00500.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00501.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00510.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00511.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00512.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00513.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00514.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00515.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00516.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00517.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00555.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00560.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00561.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00641.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00664.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 usage_00667.pdb 1 ----RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDV---PMVLVGNKCDL 53 mRtgegfL vFainntkSFedih yreqikrvkDs dv PmVlvGNK Dl usage_00023.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00024.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00034.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00046.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00047.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00050.pdb 55 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 100 usage_00090.pdb 57 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 102 usage_00091.pdb 57 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 102 usage_00117.pdb 53 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKH--- 98 usage_00134.pdb 58 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 102 usage_00147.pdb 50 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 95 usage_00168.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00169.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00170.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00171.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00186.pdb 57 SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL----- 101 usage_00238.pdb 58 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 103 usage_00261.pdb 57 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHK-- 103 usage_00262.pdb 57 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKE- 104 usage_00268.pdb 57 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKE- 104 usage_00269.pdb 56 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKE- 103 usage_00270.pdb 57 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKH--- 102 usage_00271.pdb 57 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKE- 104 usage_00272.pdb 58 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 106 usage_00292.pdb 58 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 102 usage_00317.pdb 53 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 98 usage_00336.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00337.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00338.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00339.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00354.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQHK-- 100 usage_00355.pdb 58 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQHK-- 104 usage_00405.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00406.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00407.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00419.pdb 55 PSRTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKH--- 100 usage_00427.pdb 57 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 102 usage_00483.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00486.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00487.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00499.pdb 58 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 103 usage_00500.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00501.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00510.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00511.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00512.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00513.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00514.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00515.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00516.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00517.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00555.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQHKL- 101 usage_00560.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00561.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 usage_00641.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH--- 99 usage_00664.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ---- 98 usage_00667.pdb 54 AARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIR----- 97 RtV qAQdlaRs ygiP iETSAKtrqgV dAFytlVReir #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################