################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:30 2021 # Report_file: c_1447_104.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00117.pdb # 2: usage_00309.pdb # 3: usage_00310.pdb # 4: usage_00540.pdb # 5: usage_00541.pdb # 6: usage_01089.pdb # 7: usage_01672.pdb # 8: usage_01776.pdb # 9: usage_01777.pdb # 10: usage_02032.pdb # 11: usage_02055.pdb # 12: usage_02056.pdb # 13: usage_02057.pdb # 14: usage_02058.pdb # 15: usage_03071.pdb # 16: usage_03072.pdb # 17: usage_03520.pdb # # Length: 20 # Identity: 0/ 20 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 20 ( 5.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 20 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 ---FTLN----IRGAPLRLL 13 usage_00309.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_00310.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_00540.pdb 1 -KAPDFALPG-KTGVVKL-- 16 usage_00541.pdb 1 -KAPDFALPG-KTGVVKL-- 16 usage_01089.pdb 1 -GAYAFLIM--TETEMIVAL 17 usage_01672.pdb 1 -FAYDFTLNYDENAFEYVE- 18 usage_01776.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_01777.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_02032.pdb 1 ---PDFTLNT-LNGEVVK-- 14 usage_02055.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_02056.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_02057.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_02058.pdb 1 -TAPDFTLRD-QNQQLVTL- 17 usage_03071.pdb 1 -KAPDFTLPN-QDFEPVNL- 17 usage_03072.pdb 1 -KAPDFTLPN-QDFEPVNL- 17 usage_03520.pdb 1 EMAPDFTITL-TDGKQVTL- 18 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################