################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:16 2021 # Report_file: c_1081_84.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00111.pdb # 2: usage_00156.pdb # 3: usage_00174.pdb # 4: usage_00176.pdb # 5: usage_00178.pdb # 6: usage_00282.pdb # 7: usage_00414.pdb # 8: usage_00439.pdb # 9: usage_00702.pdb # 10: usage_00703.pdb # 11: usage_00704.pdb # 12: usage_00705.pdb # 13: usage_00774.pdb # 14: usage_00817.pdb # # Length: 82 # Identity: 0/ 82 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 82 ( 9.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 82 ( 54.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00111.pdb 1 ---REDILRDAAIAIRYFVKN-------EVKFSNLFLG-LTGTGKTFVSKYIFNEIEEVK 49 usage_00156.pdb 1 PEFRALEGAWAEGVVAA-RAGA--------RIIIDDVFLGGA-AAQER----WRSFVG-- 44 usage_00174.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00176.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00178.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00282.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00414.pdb 1 -TEQATAVGAIHSAAD-------------RFSAWLLAG-ITGSGKTEV----YLSVLENV 41 usage_00439.pdb 1 ---QDKAIEALTEAIKMARAGLGHEHKP--VGSFLFAG-PTGVGKTEV----TVQLSKAL 50 usage_00702.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00703.pdb 1 ----DEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 49 usage_00704.pdb 1 ---QDEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 50 usage_00705.pdb 1 ---QDEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGKTEL----AKTLAATL 50 usage_00774.pdb 1 ---QDEAIRAVADAIRRARAGLKDPNRP--IGSFLFLG-PTGVGQTEL----AKTLAATL 50 usage_00817.pdb 1 ----NEAVDAVSNAIRRSRAGLADPNRP--IGSFLFLG-PTGVGKTEL----CKALANFF 49 a l g tg g te usage_00111.pdb 50 KEDEEYK--DVKQA----Y-VN 64 usage_00156.pdb 45 ------D--LDVLWVGVRCD-- 56 usage_00174.pdb 50 FDT--EE--AMIRI----D--- 60 usage_00176.pdb 50 FDT--EE--AMIRI----D--- 60 usage_00178.pdb 50 FDT--EE--AMIRI----D--- 60 usage_00282.pdb 50 FDT--EE--AMIQI----D--- 60 usage_00414.pdb 42 LA----QGRQALVM----V--P 53 usage_00439.pdb 51 GIE--LL-----RF----D--- 58 usage_00702.pdb 50 FDT--EE--AIRID-------- 59 usage_00703.pdb 50 FDT--EE--AIRID-------- 59 usage_00704.pdb 51 FDT--EE--AMIRI----D--- 61 usage_00705.pdb 51 FDT--EE--AMIRI----D--- 61 usage_00774.pdb 51 FDT--EE--AMIRI----D--- 61 usage_00817.pdb 50 DSD--EA--VR-ID-------- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################