################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:12 2021 # Report_file: c_0166_11.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # # Length: 141 # Identity: 29/141 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 121/141 ( 85.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/141 ( 14.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -QIMVRN--GDIRSIDDLP-G-----KVVATTAGSTAATYLREHH-----ISVLEVPKIE 46 usage_00003.pdb 1 -QIMVRN--GDIRSIDDLP-G-----KVVATTAGSTAATYLREHH-----ISVLEVPKIE 46 usage_00004.pdb 1 MRILMRKGT-LIDGMDDLKNGKIPYN-RIGIRIGTAGEDYYLREISGGSR-NFYPLKSRQ 57 qImvRn dIrsiDDLp G vvattaGstaatYlrehh svlevpkie usage_00002.pdb 47 EAYKALQTKKADAVVFDAPVLLFYAANEGKGKVEIVGSILREESYGIILPNNSPYRKPIN 106 usage_00003.pdb 47 EAYKALQTKKADAVVFDAPVLLFYAANEGKGKVEIVGSILREESYGIILPNNSPYRKPIN 106 usage_00004.pdb 58 EMYDSLLAGIIDVSFMDIGTAEYVTNNIYCNLTL-VGEDFDKSTFGIVTPKEWLYAKDLD 116 EaYkaLqtkkaDavvfDapvllfyaaNegkgkve VGsilreesyGIilPnnspYrKpin usage_00002.pdb 107 QALLNLKENGTYQSLYDKWFD 127 usage_00003.pdb 107 QALLNLKENGTYQSLYDKW-- 125 usage_00004.pdb 117 VNILSLRETGILDNLKKKWFQ 137 qalLnLkEnGtyqsLydKW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################