################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:54 2021 # Report_file: c_1212_70.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00031.pdb # 2: usage_00189.pdb # 3: usage_00190.pdb # 4: usage_00254.pdb # 5: usage_00256.pdb # 6: usage_00257.pdb # 7: usage_00259.pdb # 8: usage_01074.pdb # 9: usage_01259.pdb # 10: usage_01267.pdb # 11: usage_01268.pdb # # Length: 33 # Identity: 5/ 33 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 33 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 33 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 -----ESFEYN-KGETVRFNNGDKWNDKFM--- 24 usage_00189.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_00190.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_00254.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_00256.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_00257.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_00259.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_01074.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_01259.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_01267.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 usage_01268.pdb 1 VELIIGLLRDPQFGPTVMFGLGGVFVE---LFR 30 gllrdp fGpTVmFglGgvfve #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################