################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:02 2021 # Report_file: c_0708_58.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00258.pdb # 2: usage_00488.pdb # 3: usage_00489.pdb # 4: usage_00491.pdb # 5: usage_00492.pdb # 6: usage_00493.pdb # 7: usage_00494.pdb # # Length: 70 # Identity: 2/ 70 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 70 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 70 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 KTRSLDY---------S--DIDLMVDENGLWAVYATNQN--A-----GNIVISKLDPVS- 41 usage_00488.pdb 1 DTT-RIARPSTDRVATRGGG-RVLWRG--NEVQFRIET--S-DGGGAFEFVAWNRV---N 50 usage_00489.pdb 1 DTT-RIARPSTDRVATRGGG-RVLWRG--NEVQFRIE------------FVAWNRV---N 41 usage_00491.pdb 1 DTTRIMARPSTDRVATRGGG-RVLWRG--NEVQFRIET----------EFVAWNRV---N 44 usage_00492.pdb 1 DTTRIMARPSTDRVATR-----VLWRG--NEVQFRIET--S-------EFVAWNRV---N 41 usage_00493.pdb 1 DTTRIMARPSTDRVATR----RVLWRG--NEVQFRIET-A-------FEFVAWNRV---N 43 usage_00494.pdb 1 DTTRIMARPSTDRVATRGGG-RVLWRG--NEVQFRIET--SA-----FEFVAWNRV---N 47 dTt a r vlwrg nevqfrie fVawnrv usage_00258.pdb 42 LQILQTWNTS 51 usage_00488.pdb 51 RTVRT---LA 57 usage_00489.pdb 42 RTVRT----- 46 usage_00491.pdb 45 RTVRT----- 49 usage_00492.pdb 42 RTVRT----- 46 usage_00493.pdb 44 RTVRT----- 48 usage_00494.pdb 48 RTVRT---L- 53 rtvrt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################