################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:03 2021 # Report_file: c_1426_61.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00178.pdb # 2: usage_00179.pdb # 3: usage_00180.pdb # 4: usage_00181.pdb # 5: usage_00182.pdb # 6: usage_00183.pdb # 7: usage_00251.pdb # 8: usage_00370.pdb # 9: usage_00714.pdb # 10: usage_00715.pdb # 11: usage_00808.pdb # 12: usage_00809.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 47 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 47 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00179.pdb 1 -----SDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 41 usage_00180.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00181.pdb 1 ---VFSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 43 usage_00182.pdb 1 ---VFSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 43 usage_00183.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00251.pdb 1 ---VFSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 43 usage_00370.pdb 1 VFSYIYQYVPKIMN----------SYLDFSE----LSDDISDYIV-- 31 usage_00714.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00715.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00808.pdb 1 ----FSDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 42 usage_00809.pdb 1 -----SDVMEDLYNYINPHNGKHSPMVAK-STLDIVLANKDRLNSAI 41 sdvmedlyN pmvak s vlankdrlns #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################