################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:09 2021 # Report_file: c_0302_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00007.pdb # 4: usage_00094.pdb # 5: usage_00095.pdb # 6: usage_00191.pdb # # Length: 142 # Identity: 26/142 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/142 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/142 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -KVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDAGKPKAELAA 59 usage_00003.pdb 1 -KVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDAGKPKAELAA 59 usage_00007.pdb 1 -KVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 59 usage_00094.pdb 1 -KVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 59 usage_00095.pdb 1 -KVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 59 usage_00191.pdb 1 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASL 60 kVLLlGagtLGcyvsraLIawGVrkiTfvDngtVsysnPvrQaLynfed GkpkAElaa usage_00002.pdb 60 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDR--LRALIKEHDIIFLLVDSRES 117 usage_00003.pdb 60 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDR--LRALIKEHDIIFLLVDSRES 117 usage_00007.pdb 60 ASLKRIFPL-DATGVKLSIP-IGHKLVNEEAQHKDFDR--LRALIKEHDIIFLLVDSRES 115 usage_00094.pdb 60 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDR--LRALIKEHDIIFLLVDSRES 117 usage_00095.pdb 60 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDR--LRALIKEHDIIFLLVDSRES 117 usage_00191.pdb 61 ERAQNLNPMVDVKVDTEDIE------------------KKPESFFTQFDAVCLTCCSRDV 102 aslkrifPl DatgvklsIp lralikehDiifLlvdSRes usage_00002.pdb 118 RWLPSLLSNIENKTVINAALGF 139 usage_00003.pdb 118 RWLPSLLSNIENKTVINAALGF 139 usage_00007.pdb 116 RWLPSLLSNIENKTVINAALG- 136 usage_00094.pdb 118 RWLPSLLSNIENKTVINAALGF 139 usage_00095.pdb 118 RWLPSLLSNIENKTVINAALG- 138 usage_00191.pdb 103 IVKVDQICHKNSIKFFTGDVF- 123 rwlpsllsnienktvinaalg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################