################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:24 2021 # Report_file: c_0173_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00118.pdb # 2: usage_00119.pdb # 3: usage_00149.pdb # 4: usage_00387.pdb # 5: usage_00388.pdb # 6: usage_00389.pdb # 7: usage_00390.pdb # # Length: 153 # Identity: 42/153 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 141/153 ( 92.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/153 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 usage_00119.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 usage_00149.pdb 1 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG-AEVVQG-DQDDQ 58 usage_00387.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 usage_00388.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 usage_00389.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 usage_00390.pdb 1 KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 59 KtiaVvnaTGrQaaSliRvaaavG hhVRaqvhslkgliAeELqaip vtlfQG llnnv usage_00118.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 usage_00119.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 usage_00149.pdb 59 VIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT 117 usage_00387.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 usage_00388.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 usage_00389.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 usage_00390.pdb 60 PLMDTLFEGAHLAFINTTSQA-G---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 115 plMdtlfeGAhlaFInTtsqa g dEiaiGKdLADaAkRaG iqhyiYSsmpdhslyg usage_00118.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVY--- 144 usage_00119.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVY--- 144 usage_00149.pdb 118 AGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLP- 149 usage_00387.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVY--- 144 usage_00388.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 147 usage_00389.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 147 usage_00390.pdb 116 -PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 147 pwpAvpmwapKftVEnYvRqlGlPsTfVy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################