################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:43 2021 # Report_file: c_0435_49.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00022.pdb # 2: usage_00023.pdb # 3: usage_00100.pdb # 4: usage_00101.pdb # 5: usage_00256.pdb # 6: usage_00269.pdb # 7: usage_00270.pdb # 8: usage_00419.pdb # 9: usage_00424.pdb # 10: usage_00453.pdb # 11: usage_00474.pdb # 12: usage_00690.pdb # # Length: 102 # Identity: 18/102 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/102 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/102 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 --MLFLCRLSEVYPPIRN-EPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKL 54 usage_00023.pdb 1 ---LFLCRLSEVYPPIRN-EPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKL 53 usage_00100.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYGA-I-------MVLESVMFAILAERSLGPKL 48 usage_00101.pdb 1 --MLFQCSLPDTTATLGD-EPRKVLLRLYG--------EAMVLESVMFAILAERSLGPKL 49 usage_00256.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLY---------EAMVLESVMFAILAERSLGPKL 47 usage_00269.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYGA-------EAMVLESVMFAILAERSLGPKL 49 usage_00270.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYGA-------EAMVLESVMFAILAERSLGPKL 49 usage_00419.pdb 1 --QLFVVSIV-N-----ELKHPRILFRIYGK-HVFY---DSKVELDVFRYLSNINIAPNI 48 usage_00424.pdb 1 SNMLFQCSLPDTTATLGD-EPRKVLLRLYGA-------EAMVLESVMFAILAERSLGPKL 52 usage_00453.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYGA-------EAMVLESVMFAILAERSLGPKL 49 usage_00474.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYGA-------EAMVLESVMFAILAERSLGPKL 49 usage_00690.pdb 1 ---LFQCSLPDTTATLGD-EPRKVLLRLYG----------MVLESVMFAILAERSLGPKL 46 LF c l ep kvLlR Y v Esv F L er lgPkl usage_00022.pdb 55 YGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQL 96 usage_00023.pdb 54 YGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQL 95 usage_00100.pdb 49 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 89 usage_00101.pdb 50 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 90 usage_00256.pdb 48 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 88 usage_00269.pdb 50 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGM 91 usage_00270.pdb 50 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGM 91 usage_00419.pdb 49 IADFPEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHII 90 usage_00424.pdb 53 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 93 usage_00453.pdb 50 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 90 usage_00474.pdb 50 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHG- 90 usage_00690.pdb 47 YGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGM 88 ygiF GRlE Ipsr L e sL s iA a H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################