################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:56 2021 # Report_file: c_1172_124.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_01262.pdb # 2: usage_01690.pdb # 3: usage_02240.pdb # 4: usage_03297.pdb # 5: usage_03298.pdb # 6: usage_03493.pdb # 7: usage_03494.pdb # 8: usage_03496.pdb # 9: usage_03497.pdb # 10: usage_03505.pdb # 11: usage_03506.pdb # 12: usage_03510.pdb # 13: usage_03524.pdb # 14: usage_05145.pdb # # Length: 47 # Identity: 4/ 47 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 47 ( 14.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 47 ( 51.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01262.pdb 1 GVQIASKTGTAEHGTDPRHT-PPHAWYIAFAPAQAPKVAVAVLVE-- 44 usage_01690.pdb 1 ----AGKTGTVIENN----D-KYLALFAGYVPADNPRYVLLVVIE-- 36 usage_02240.pdb 1 --KIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 40 usage_03297.pdb 1 -VKIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 41 usage_03298.pdb 1 -VKIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 41 usage_03493.pdb 1 -VKIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 41 usage_03494.pdb 1 --KIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 40 usage_03496.pdb 1 -VKIAGKTGTADV------G-NFNSFFIGFAPYDHPTLVVSVVIEGN 39 usage_03497.pdb 1 ------KTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 36 usage_03505.pdb 1 -VKIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 41 usage_03506.pdb 1 ------KTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 36 usage_03510.pdb 1 --KIAGKTGTAD--N----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 38 usage_03524.pdb 1 ----AGKTGTTNN------NVDTWFAGIDG--------STVTITWV- 28 usage_05145.pdb 1 -VKIAGKTGTADVEN----G-NFNSFFIGFAPYDHPTLVVSVVIEGN 41 KTGT i v e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################