################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:50 2021 # Report_file: c_0784_88.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00561.pdb # 2: usage_00562.pdb # 3: usage_00573.pdb # 4: usage_01050.pdb # 5: usage_01051.pdb # # Length: 73 # Identity: 33/ 73 ( 45.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 73 ( 46.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 73 ( 5.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00561.pdb 1 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYL 60 usage_00562.pdb 1 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYL 60 usage_00573.pdb 1 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTW-VFEEDIGGKKLTEIINTQHENVKYL 59 usage_01050.pdb 1 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF---ERMVDIINNKHENTKYL 57 usage_01051.pdb 1 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF---ERMVDIINNKHENTKYL 57 K I GSGNW SAI K VG NA F V m E IIN HEN KYL usage_00561.pdb 61 PGHKLPPNVVAVP 73 usage_00562.pdb 61 PGHKLPPNVVAVP 73 usage_00573.pdb 60 PGHKLPPNVVAVP 72 usage_01050.pdb 58 KGVPLPHNIVAHS 70 usage_01051.pdb 58 KGVPLPHNIVAHS 70 G LP N VA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################