################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:29 2021 # Report_file: c_1012_13.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00086.pdb # 2: usage_00340.pdb # 3: usage_00383.pdb # 4: usage_00384.pdb # 5: usage_00584.pdb # 6: usage_00585.pdb # # Length: 74 # Identity: 7/ 74 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 74 ( 40.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 74 ( 59.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 ---PSIGIVGYTNSGKTSLFNSLTG------------------L-MSPKRYAIP-INNRK 37 usage_00340.pdb 1 ----DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLG---------VETDDGRS 47 usage_00383.pdb 1 ---PSIGIVGYTNSGKTSLFNSLTG------------------L-T-PKRYAIP-INNRK 36 usage_00384.pdb 1 ---PSIGIVGYTNSGKTSLFNSLTG------------------L-S-PKRYAIP-INNRK 36 usage_00584.pdb 1 NNIPSIGIVGYTNSGKTSLFNSLTG------------------L-S-PKRYAIP-INNRK 39 usage_00585.pdb 1 ---PSIGIVGYTNSGKTSLFNSLTG------------------LTS-PKRYAIP-INNRK 37 siGiVGytnsGKtsLfnsltg ip innRk usage_00086.pdb 38 IM--LVDTVGFIRG 49 usage_00340.pdb 48 FVAD---------- 51 usage_00383.pdb 37 IM--LVDTVGFIRG 48 usage_00384.pdb 37 IM--LVD------- 41 usage_00584.pdb 40 IM--LV-------- 43 usage_00585.pdb 38 IM--LVD------- 42 im #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################