################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:17 2021 # Report_file: c_1442_1491.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_03004.pdb # 2: usage_03006.pdb # 3: usage_03008.pdb # 4: usage_10459.pdb # 5: usage_13040.pdb # 6: usage_16203.pdb # # Length: 29 # Identity: 0/ 29 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 29 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 29 ( 55.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03004.pdb 1 -G-RTSTL---PD-GRTLREWDIVA---- 19 usage_03006.pdb 1 -G-RTSTL---PD-GRTLREWDIVA---- 19 usage_03008.pdb 1 -G-RTSTL---PD-GRTLREWDIVA---- 19 usage_10459.pdb 1 -G-WSGTM---PN-GDKIQP--------- 14 usage_13040.pdb 1 --GKCTDI---PYARRVPPI-----AKTR 19 usage_16203.pdb 1 HR-TKTADKGKRL-RKKHWSA-------- 19 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################