################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:16 2021 # Report_file: c_0363_20.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00094.pdb # 2: usage_00098.pdb # 3: usage_00101.pdb # 4: usage_00102.pdb # 5: usage_00104.pdb # 6: usage_00123.pdb # 7: usage_00124.pdb # 8: usage_00127.pdb # 9: usage_00200.pdb # 10: usage_00290.pdb # 11: usage_00291.pdb # 12: usage_00292.pdb # 13: usage_00293.pdb # 14: usage_00294.pdb # 15: usage_00295.pdb # 16: usage_00309.pdb # 17: usage_00310.pdb # 18: usage_00446.pdb # 19: usage_00467.pdb # 20: usage_00468.pdb # 21: usage_00469.pdb # 22: usage_00548.pdb # # Length: 140 # Identity: 32/140 ( 22.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/140 ( 83.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/140 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00098.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00101.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00102.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00104.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00123.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00124.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00127.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00200.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00290.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00291.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00292.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00293.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00294.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00295.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00309.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00310.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 usage_00446.pdb 1 YKAEYRRLKQMKEMGVNSIRTTHNPASEQTLQIAAELGLLVQEEAFDTW-YGGKKPYDYG 59 usage_00467.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--EGM-VPMN 56 usage_00468.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--EGM-VPMN 56 usage_00469.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--NGM-VPMN 56 usage_00548.pdb 1 EQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN-IET--HGM-VPMN 56 eqtmvqdillMKqnnfNavRcsHyPnhplwytlcdryGLyVvdEAn ie gm vpmn usage_00094.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00098.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00101.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00102.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00104.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00123.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00124.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00127.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00200.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00290.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00291.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00292.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00293.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00294.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00295.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00309.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00310.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00446.pdb 60 RFFEKDATHPEARKGEKWSDFDLRTMVERGKNNPAIFMWSIGNEIGEA-NGDAHSLATVK 118 usage_00467.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00468.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00469.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 usage_00548.pdb 57 RLTD-D---PRWL---PAMSERVTRMVQRDRNHPSVIIWSLGNES--GH-----G-ANHD 101 Rltd D Prwl pamservtrMVqRdrNhPsviiWSlGNEs g g Anhd usage_00094.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00098.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00101.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00102.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00104.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00123.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00124.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00127.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00200.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00290.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00291.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00292.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00293.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00294.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00295.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00309.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00310.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00446.pdb 119 RLVKVIKDVDKTRYVTMGAD 138 usage_00467.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00468.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00469.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 usage_00548.pdb 102 ALYRWIKSVDPSRPVQYE-G 120 aLyrwIKsVDpsRpVqye g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################