################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:41:46 2021 # Report_file: c_0207_2.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00006.pdb # 2: usage_00017.pdb # 3: usage_00031.pdb # 4: usage_00044.pdb # 5: usage_00079.pdb # 6: usage_00080.pdb # 7: usage_00081.pdb # 8: usage_00082.pdb # 9: usage_00087.pdb # 10: usage_00088.pdb # 11: usage_00089.pdb # 12: usage_00090.pdb # 13: usage_00111.pdb # 14: usage_00133.pdb # 15: usage_00134.pdb # 16: usage_00135.pdb # 17: usage_00145.pdb # 18: usage_00146.pdb # 19: usage_00159.pdb # 20: usage_00173.pdb # 21: usage_00174.pdb # 22: usage_00190.pdb # 23: usage_00197.pdb # 24: usage_00203.pdb # 25: usage_00207.pdb # 26: usage_00211.pdb # 27: usage_00212.pdb # 28: usage_00226.pdb # # Length: 121 # Identity: 23/121 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/121 ( 24.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/121 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -IQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWIGLIDPENGNTIY 59 usage_00017.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00031.pdb 1 -VQLQQSGAELARPGASVKLSCKASGYIFTDYYINWVRQRTGQGFEWIGEIYPGSGNIDY 59 usage_00044.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNY 59 usage_00079.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00080.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00081.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00082.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00087.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00088.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00089.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00090.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00111.pdb 1 -VQLQQSGAELARPGASVKLSCKASGYIFTDYYINWVRQRTGQGFEWIGEIYPGSGNIDY 59 usage_00133.pdb 1 ---LQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIHPHSGSTNY 57 usage_00134.pdb 1 -VQLVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKY 59 usage_00135.pdb 1 -VQLVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKY 59 usage_00145.pdb 1 --QLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHY 58 usage_00146.pdb 1 --QLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHY 58 usage_00159.pdb 1 -VQLQQSGPELVKPGASVKISCKASGYSFTSYWIHWIKQRPGQGLEWIGMIDPSDGETRL 59 usage_00173.pdb 1 QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKY 60 usage_00174.pdb 1 QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKY 60 usage_00190.pdb 1 -VQLQQPGAELVRPGSSVKLSCKASGYTFTSKWMHWVKQRPIQGLEWIGNIDPSDSETHY 59 usage_00197.pdb 1 -VQLLESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00203.pdb 1 -VQLLQPGAELVKPGASVKLSCKASGYTFTSYWMYWVKQRPGQGLEWIGEIDPSDSYTNY 59 usage_00207.pdb 1 -VQLQQSGAELARPGASVKLSCKASGYIFTDYYINWVRQRTGQGFEWIGEIYPGSGNIDY 59 usage_00211.pdb 1 -IQLQQSGPELRRPGSSVKLSCKASGYNITDYLIHWVRHRPEHGLEWIGWIDPEDGETRY 59 usage_00212.pdb 1 -IQLQQSGPELRRPGSSVKLSCKASGYNITDYLIHWVRHRPEHGLEWIGWIDPEDGETRY 59 usage_00226.pdb 1 QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKY 60 L G E PG s K SCK SGy Wv EWIG P y usage_00006.pdb 60 DPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARDNS----YYFDYWGQGTTLT-- 113 usage_00017.pdb 60 NLKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYG--TYYFDYWGQGTTLT- 116 usage_00031.pdb 60 NERFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCVRGFG---------YWGQGTTLT- 109 usage_00044.pdb 60 NEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTV 119 usage_00079.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00080.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00081.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00082.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00087.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00088.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00089.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00090.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00111.pdb 60 NERFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCVRGFG---------YWGQGTTLT- 109 usage_00133.pdb 58 NEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGWD-------VAYWGQGTLVTV 110 usage_00134.pdb 60 NERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLN-------MAYWGQGTLVT- 111 usage_00135.pdb 60 NERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLN-------MAYWGQGTLVT- 111 usage_00145.pdb 59 SPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFE--G------AQSSNAF- 109 usage_00146.pdb 59 SPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFE--G------AQSSNAF- 109 usage_00159.pdb 60 NQRFQGRATLTVDESTSTAYMQLRSPTSEDSAVYYCTRLKEYG--N------YDSFY--- 108 usage_00173.pdb 61 NEKFENRASLTVDKHSSTAYMQLSSLTSEDSAIYYCARWFF----PWYFDVWGTGTTVT- 115 usage_00174.pdb 61 NEKFENRASLTVDKHSSTAYMQLSSLTSEDSAIYYCARWFF----PWYFDVWGTGTTVT- 115 usage_00190.pdb 60 NQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGVT----RGYFDVWGTGTTVT- 114 usage_00197.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCTRRDSD--------YWGAGTTVTV 111 usage_00203.pdb 60 NQNFKGKATLTVDKSSSTAFMQLSSLTSQDSAVYFCARSPHYY---------GTTYNYP- 109 usage_00207.pdb 60 NERFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCVRGFG---------YWGQGTTLT- 109 usage_00211.pdb 60 AQKFQSKATLTADTSSNAAYMQLSSLTPEDTATYFCARSLDSTY-IYPFAYWGQGTLVTV 118 usage_00212.pdb 60 AQKFQSKATLTADTSSNAAYMQLSSLTPEDTATYFCARSLDSTY-IYPFAYWGQGTLVTV 118 usage_00226.pdb 61 NEKFENRASLTVDKHSSTAYMQLSSLTSEDSAIYYCARWFF----PWYFDVWGTGTTVT- 115 F D Ay l D Y C r usage_00006.pdb - usage_00017.pdb - usage_00031.pdb - usage_00044.pdb - usage_00079.pdb - usage_00080.pdb - usage_00081.pdb - usage_00082.pdb - usage_00087.pdb - usage_00088.pdb - usage_00089.pdb - usage_00090.pdb - usage_00111.pdb - usage_00133.pdb 111 S 111 usage_00134.pdb - usage_00135.pdb - usage_00145.pdb - usage_00146.pdb - usage_00159.pdb - usage_00173.pdb - usage_00174.pdb - usage_00190.pdb - usage_00197.pdb 112 S 112 usage_00203.pdb 110 M 110 usage_00207.pdb - usage_00211.pdb 119 S 119 usage_00212.pdb 119 S 119 usage_00226.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################