################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:35 2021 # Report_file: c_0224_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00077.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00080.pdb # 7: usage_00111.pdb # 8: usage_00173.pdb # 9: usage_00174.pdb # # Length: 145 # Identity: 31/145 ( 21.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/145 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/145 ( 28.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 IVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQP 60 usage_00038.pdb 1 IVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQP 60 usage_00077.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 usage_00078.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 usage_00079.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 usage_00080.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 usage_00111.pdb 1 PVFVKPAN-----GISKAENRTDLKQAIALALKYDSRVLIEQGVDA-REIEVGILGNTDV 54 usage_00173.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 usage_00174.pdb 1 PVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA-REIEVAVLGNDYP 59 VFVK AN GIS N e e fq D k IE Vn RE EV v GNd p usage_00037.pdb 61 LVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLN 120 usage_00038.pdb 61 LVSEIGAHT----------------------VHFQIPAQLSPEVTKEVKQMALDAYKVLN 98 usage_00077.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 usage_00078.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 usage_00079.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 usage_00080.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 usage_00111.pdb 55 KTTLPGEIV-----------------------TMAIPAEIDPVIVEKMRDYAATAFRTLG 91 usage_00173.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 usage_00174.pdb 60 EATWPGEVVKDVA------F-----------VQLQIPADLDEDVQLTLRNMALEAFKATD 102 G qIPA l v mAl A k usage_00037.pdb 121 LRGEARMDFLLDENNVPYLGEPNTL 145 usage_00038.pdb 99 LRGEARMDFLLDENNVPYLGEPNT- 122 usage_00077.pdb 103 CSGLVRADFFVTEDNQIYINETNAM 127 usage_00078.pdb 103 CSGLVRADFFVTEDNQIYINETNAM 127 usage_00079.pdb 103 CSGLVRADFFVTEDNQIYINE---- 123 usage_00080.pdb 103 CSGLVRADFFVTEDNQIYINE---- 123 usage_00111.pdb 92 CCGLSRCDFFLTEDGKVYL------ 110 usage_00173.pdb 103 CSGLVRADFFVTE------------ 115 usage_00174.pdb 103 CSGLVRADFFVTEDNQIYINETNAM 127 G R DF E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################