################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:11:02 2021 # Report_file: c_0024_15.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00230.pdb # 2: usage_00231.pdb # 3: usage_00232.pdb # 4: usage_00233.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00264.pdb # 8: usage_00265.pdb # 9: usage_00401.pdb # 10: usage_00402.pdb # 11: usage_00403.pdb # 12: usage_00404.pdb # 13: usage_00405.pdb # 14: usage_00406.pdb # # Length: 252 # Identity: 225/252 ( 89.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 236/252 ( 93.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/252 ( 6.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00230.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00231.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00232.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00233.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00262.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00263.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00264.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00265.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00401.pdb 1 -GAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 59 usage_00402.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00403.pdb 1 -GAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 59 usage_00404.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00405.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 usage_00406.pdb 1 SGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD 60 GAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALD usage_00230.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00231.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00232.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00233.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00262.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00263.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00264.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00265.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00401.pdb 60 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 119 usage_00402.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00403.pdb 60 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 119 usage_00404.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00405.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 usage_00406.pdb 61 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 120 GKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL usage_00230.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00231.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00232.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00233.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00262.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00263.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00264.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00265.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00401.pdb 120 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 179 usage_00402.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00403.pdb 120 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 179 usage_00404.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00405.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 usage_00406.pdb 121 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS 180 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMAS usage_00230.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00231.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00232.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQI-SATSRLLVHESIA-- 237 usage_00233.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQISATSRLLVHESIAAEF 240 usage_00262.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00263.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00264.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00265.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00401.pdb 180 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQIASATSRLLVHESIAAE 239 usage_00402.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQIASATSRLLVHESIAAE 240 usage_00403.pdb 180 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQIASATSRLLVHESIAAE 239 usage_00404.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQIASATSRLLVHESIAAE 240 usage_00405.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 usage_00406.pdb 181 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 240 AAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQI satsrLlvhesiA usage_00230.pdb 241 FVDKLVKWTKNI 252 usage_00231.pdb 241 FVDKLVKWTKNI 252 usage_00232.pdb ------------ usage_00233.pdb 241 VDKLVKWTKNI- 251 usage_00262.pdb 241 FVDKLVKWTKNI 252 usage_00263.pdb 241 FVDKLVKWTKNI 252 usage_00264.pdb 241 FVDKLVKWTKNI 252 usage_00265.pdb 241 FVDKLVKWTKNI 252 usage_00401.pdb 240 FVDKLVKWTKNI 251 usage_00402.pdb 241 FVDKLVKWTKNI 252 usage_00403.pdb 240 FVDKLVKWTKNI 251 usage_00404.pdb 241 FVDKLVKWTKNI 252 usage_00405.pdb 241 FVDKLVKWTKNI 252 usage_00406.pdb 241 FVDKLVKWTKNI 252 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################