################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:20 2021 # Report_file: c_1126_23.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00002.pdb # 2: usage_00157.pdb # 3: usage_00393.pdb # 4: usage_00417.pdb # 5: usage_00550.pdb # # Length: 110 # Identity: 17/110 ( 15.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/110 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/110 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 RMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHE----------CGGVSASI-G---- 45 usage_00157.pdb 1 RLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLDRC-GFRGSSYLGIPF 59 usage_00393.pdb 1 RMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHE----------CGGVSASI-G---- 45 usage_00417.pdb 1 RMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHE----------CGGVSASI-G---- 45 usage_00550.pdb 1 RMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHE----------CGGVSASI-G---- 45 RmsgvywgLtvmDlmgqLhrmNKeeIlvfIkScQhe C GvsaSi g usage_00002.pdb 46 ------------HDPHLLYTLSAVQILTLYDSI-HVINVDKVVAYVQSLQ 82 usage_00157.pdb 60 NPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQ 109 usage_00393.pdb 46 ------------HDPHLLYTLSAVQILTLYDSI-HVINVDKVVAYVQSLQ 82 usage_00417.pdb 46 ------------HDPHLLYTLSAVQILTLYDSI-HVINVDKVVAYVQS-- 80 usage_00550.pdb 46 ------------HDPHLLYTLSAVQILTLYDSI-HVINVDKVVAYVQSLQ 82 hdpHllyTlsavqiLtlydsi hvinvdkvvAyvqs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################