################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:04 2021 # Report_file: c_1403_160.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00239.pdb # 2: usage_00240.pdb # 3: usage_00247.pdb # 4: usage_01013.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 74 ( 9.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 74 ( 68.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 TADEIREQFSQASA-YQQEVP-----QYGTLLELVADVNLAVLENN-------------- 40 usage_00240.pdb 1 -ADEIREQFSQASA-YQQEVP-----QYGTLLELVADVNLAVLENNPQVNADE------- 46 usage_00247.pdb 1 --TAEYTKVVEFL-AREAKVPRYTWVPTQVVSHIL------------------------- 32 usage_01013.pdb 1 ------------RQ-LWRQFP-----QVEPQLTALQDYLLRTVQ---------LDNQPIH 33 vP q l usage_00239.pdb 41 -----LARLNVE-- 47 usage_00240.pdb 47 -----LARLNVE-- 53 usage_00247.pdb 33 ---PTEGLERFLTA 43 usage_01013.pdb 34 HKI--LALLKSG-- 43 la l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################