################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:22 2021 # Report_file: c_1297_159.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00050.pdb # 2: usage_00051.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_00723.pdb # 6: usage_00969.pdb # 7: usage_01813.pdb # 8: usage_01927.pdb # 9: usage_01928.pdb # 10: usage_01929.pdb # 11: usage_01931.pdb # 12: usage_01978.pdb # 13: usage_02108.pdb # 14: usage_02145.pdb # 15: usage_02182.pdb # 16: usage_02222.pdb # 17: usage_02224.pdb # 18: usage_02225.pdb # 19: usage_02295.pdb # 20: usage_02904.pdb # 21: usage_03000.pdb # # Length: 48 # Identity: 3/ 48 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 48 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 48 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_00051.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_00054.pdb 1 TINKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 44 usage_00055.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_00723.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_00969.pdb 1 --------YCKIAEQLGDGDEVIEKFDYVFAE-NGTVQYKH------- 32 usage_01813.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_01927.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_01928.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_01929.pdb 1 TINKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 44 usage_01931.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_01978.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_02108.pdb 1 --NKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 42 usage_02145.pdb 1 -SQLLLNWCVQIAKGMM---YLEERR-LVHRDLAARNVLVKSPNHVKI 43 usage_02182.pdb 1 TINKLLDMAAQIAEGMA---FIEERN-YIHRNLRAANILVSDTLSCKI 44 usage_02222.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_02224.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_02225.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_02295.pdb 1 TINKLLDMAAQIAEGMA---FIEERN-YIHRNLRAANILVSDTLSCKI 44 usage_02904.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 usage_03000.pdb 1 -INKLLDMAAQIAEGMA---FIEERN-YIHRDLRAANILVSDTLSCKI 43 qIAegm eEr y hr a n lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################