################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:17:30 2021 # Report_file: c_0549_3.html ################################################################################################ #==================================== # Aligned_structures: 52 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00010.pdb # 4: usage_00012.pdb # 5: usage_00014.pdb # 6: usage_00016.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00026.pdb # 10: usage_00027.pdb # 11: usage_00028.pdb # 12: usage_00029.pdb # 13: usage_00030.pdb # 14: usage_00031.pdb # 15: usage_00032.pdb # 16: usage_00033.pdb # 17: usage_00034.pdb # 18: usage_00035.pdb # 19: usage_00036.pdb # 20: usage_00037.pdb # 21: usage_00038.pdb # 22: usage_00039.pdb # 23: usage_00040.pdb # 24: usage_00042.pdb # 25: usage_00043.pdb # 26: usage_00044.pdb # 27: usage_00045.pdb # 28: usage_00046.pdb # 29: usage_00047.pdb # 30: usage_00048.pdb # 31: usage_00049.pdb # 32: usage_00050.pdb # 33: usage_00051.pdb # 34: usage_00052.pdb # 35: usage_00053.pdb # 36: usage_00054.pdb # 37: usage_00055.pdb # 38: usage_00056.pdb # 39: usage_00057.pdb # 40: usage_00058.pdb # 41: usage_00059.pdb # 42: usage_00060.pdb # 43: usage_00062.pdb # 44: usage_00063.pdb # 45: usage_00064.pdb # 46: usage_00065.pdb # 47: usage_00068.pdb # 48: usage_00071.pdb # 49: usage_00072.pdb # 50: usage_00073.pdb # 51: usage_00074.pdb # 52: usage_00075.pdb # # Length: 107 # Identity: 54/107 ( 50.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/107 ( 51.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/107 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---DALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA 57 usage_00002.pdb 1 ---DALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA 57 usage_00010.pdb 1 D--AALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA 58 usage_00012.pdb 1 --VAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA 58 usage_00014.pdb 1 --VAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA 58 usage_00016.pdb 1 --VAALKQDLQALMTDSQDWFPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA 58 usage_00023.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00024.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00026.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00027.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00028.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00029.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00030.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00031.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00032.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00033.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00034.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00035.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00036.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00037.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00038.pdb 1 ---AAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 57 usage_00039.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00040.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00042.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00043.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00044.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00045.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00046.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00047.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00048.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00049.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00050.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00051.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00052.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00053.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00054.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00055.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00056.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00057.pdb 1 ---AAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 56 usage_00058.pdb 1 ---AAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 56 usage_00059.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00060.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00062.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00063.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00064.pdb 1 -DLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 58 usage_00065.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00068.pdb 1 --VDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA 58 usage_00071.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00072.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA 58 usage_00073.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00074.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 usage_00075.pdb 1 --LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMA-HSAGTYRTADGRGGAGEGQQRFA 57 A D MT SQ WwPAD GHYG L IR H AGTYR DGRGGAG G QRFA usage_00001.pdb 58 PLNSWPDNASLDKARRLLWPVKKKYGKKLS----------------- 87 usage_00002.pdb 58 PLNSWPDNASLDKARRLLWPVKKKYGKKLS----------------- 87 usage_00010.pdb 59 PLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMG 105 usage_00012.pdb 59 PLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMG 105 usage_00014.pdb 59 PLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMG 105 usage_00016.pdb 59 PLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMG 105 usage_00023.pdb 58 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 82 usage_00024.pdb 58 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 82 usage_00026.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00027.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00028.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00029.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00030.pdb 59 PLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00031.pdb 59 PLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00032.pdb 58 PLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00033.pdb 58 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 82 usage_00034.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00035.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00036.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00037.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00038.pdb 58 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 82 usage_00039.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00040.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00042.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00043.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00044.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00045.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00046.pdb 58 PLNSWPANANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00047.pdb 59 PLNSWPANANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00048.pdb 59 PLNSWPANANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00049.pdb 59 PLNSWPANANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00050.pdb 59 PLNSWPANANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00051.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00052.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00053.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00054.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00055.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00056.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00057.pdb 57 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 103 usage_00058.pdb 57 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 103 usage_00059.pdb 58 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 82 usage_00060.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00062.pdb 58 PLNSFPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00063.pdb 58 PLNSFPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00064.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00065.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00068.pdb 59 PLNSWPDNASLDKARRLLWPVKKKYGKKLS----------------- 88 usage_00071.pdb 59 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 105 usage_00072.pdb 59 PLNSWPDNANLDKARRLLWPIKQKY---------------------- 83 usage_00073.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00074.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 usage_00075.pdb 58 PLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMG 104 PLNS P N LDKARRLLWP K KY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################