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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:57:52 2021
# Report_file: c_1109_29.html
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#====================================
# Aligned_structures: 8
#   1: usage_00015.pdb
#   2: usage_00016.pdb
#   3: usage_00017.pdb
#   4: usage_00018.pdb
#   5: usage_00019.pdb
#   6: usage_00305.pdb
#   7: usage_00312.pdb
#   8: usage_00315.pdb
#
# Length:         85
# Identity:       77/ 85 ( 90.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     77/ 85 ( 90.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            8/ 85 (  9.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00015.pdb         1  -QLPNMAWDTIVEQSTAN-PLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   58
usage_00016.pdb         1  -QLPNMAWDTIVEQSTA-----LDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   54
usage_00017.pdb         1  -QLPNMAWDTIVEQSTAN-PTLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   58
usage_00018.pdb         1  MQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   60
usage_00019.pdb         1  --LPNMAWDTIVEQSTAN-PTLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   57
usage_00305.pdb         1  -QLPNMAWDTIVEQSTAN-PL-LDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   57
usage_00312.pdb         1  -QLPNMAWDTIVEQSTAN-PTLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   58
usage_00315.pdb         1  -QLPNMAWDTIVEQSTAN-PTLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM   58
                             LPNMAWDTIVEQSTA     LDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNM

usage_00015.pdb        59  LQLYRAVSSMISAQVAAEGLIATK-   82
usage_00016.pdb        55  LQLYRAVSSMISAQVAAEGLIATK-   78
usage_00017.pdb        59  LQLYRAVSSMISAQVAAEGLIATK-   82
usage_00018.pdb        61  LQLYRAVSSMISAQVAAEGLIATK-   84
usage_00019.pdb        58  LQLYRAVSSMISAQVAAEGLIATK-   81
usage_00305.pdb        58  LQLYRAVSSMISAQVAAEGLIATK-   81
usage_00312.pdb        59  LQLYRAVSSMISAQVAAEGLIATKT   83
usage_00315.pdb        59  LQLYRAVSSMISAQVAAEGLIATK-   82
                           LQLYRAVSSMISAQVAAEGLIATK 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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