################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:40 2021 # Report_file: c_0743_7.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00129.pdb # 8: usage_00147.pdb # 9: usage_00165.pdb # 10: usage_00194.pdb # # Length: 102 # Identity: 6/102 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/102 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/102 ( 41.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 HLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAG 60 usage_00004.pdb 1 HLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAG 60 usage_00065.pdb 1 MVLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 usage_00066.pdb 1 MVLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 usage_00067.pdb 1 MVLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 usage_00068.pdb 1 MVLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 usage_00129.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKD-DSIITVLTGNGDYYSSG 58 usage_00147.pdb 1 ELHEEIRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSG 60 usage_00165.pdb 1 -VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 59 usage_00194.pdb 1 FILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAG 60 G nrP N e l L Ga G usage_00003.pdb 61 ND---M----KDF----G-PAGQVPPFVL----LKSA--ARL 84 usage_00004.pdb 61 NDAGQ-----------------VP-PFVL----LKSA--A-- 76 usage_00065.pdb 61 QD---L----TEFGDRKP-DYEAH-LR--------------- 78 usage_00066.pdb 61 QD---L----TEFGDRKP-DYEAH-LRRY------------- 80 usage_00067.pdb 61 QD---L----TEFGDRKP-DYEAH-LRRY------------- 80 usage_00068.pdb 61 QD---L----TEFGDRKP-DYEAH-LRRY------------- 80 usage_00129.pdb 59 ND---L----TNFT---------------------------- 65 usage_00147.pdb 61 AQ---I----SAAAETFAA----------------------- 72 usage_00165.pdb 60 MD---LGPEI---------LQEKI-RREA-SQWQWKLLR--- 84 usage_00194.pdb 61 QD---L----N-----AP-DLGMS-VERFYNPLVRRL--AKL 86 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################