################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:22 2021 # Report_file: c_1269_41.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00183.pdb # 2: usage_00190.pdb # 3: usage_00277.pdb # 4: usage_00288.pdb # 5: usage_00289.pdb # 6: usage_00377.pdb # 7: usage_00384.pdb # 8: usage_00385.pdb # 9: usage_00465.pdb # 10: usage_00466.pdb # 11: usage_00527.pdb # 12: usage_00537.pdb # 13: usage_00787.pdb # 14: usage_00841.pdb # 15: usage_00914.pdb # 16: usage_00915.pdb # 17: usage_01144.pdb # 18: usage_01249.pdb # 19: usage_01250.pdb # 20: usage_01409.pdb # 21: usage_01410.pdb # # Length: 41 # Identity: 4/ 41 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 41 ( 19.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 41 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00183.pdb 1 -FLAGHSLGEFNALLAAGCFDFETGLKLVARRAELMSQ--- 37 usage_00190.pdb 1 -AVVGHSQGEIAAAHVAGALTLEDAAKLVVGRSRLMRSLS- 39 usage_00277.pdb 1 --VAGHSLGEYAALVCAGALKFEEAVKLVEKRGQYQE---- 35 usage_00288.pdb 1 --LAGHSLGEYSALVCAGVINFADAVRLVERGKFQE----- 34 usage_00289.pdb 1 --LAGHSLGEYSALVCAGVINFADAVRLVERGKFQE----- 34 usage_00377.pdb 1 -GIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEA-- 38 usage_00384.pdb 1 -VLAGHSLGEYSALVCAGVIDFKQAIKLVELRGQLQQ---- 36 usage_00385.pdb 1 -VLAGHSLGEYSALVCAGVIDFKQAIKLVELRGQLQQ---- 36 usage_00465.pdb 1 -MMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA-- 38 usage_00466.pdb 1 -MMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA-- 38 usage_00527.pdb 1 -MVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAA- 39 usage_00537.pdb 1 -FALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACA 40 usage_00787.pdb 1 ALLAGHSLGEYTALVAAGVLSLHDGAHLVRLRGQFMQAAA- 40 usage_00841.pdb 1 -MMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQE--- 37 usage_00914.pdb 1 -FVAGHSLGEYNALFAAEAFDFETGLQLVRKRGELMSLI-- 38 usage_00915.pdb 1 -FAAGHSLGEYNALMAAGAFDFETGLRLVKKRGELMGRI-- 38 usage_01144.pdb 1 -ISCGLSLGEYSALIHSGAINFEDGVKLVKKRGKFMQEAVA 40 usage_01249.pdb 1 ALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEA-- 39 usage_01250.pdb 1 ALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQE--- 38 usage_01409.pdb 1 -FVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAA-- 38 usage_01410.pdb 1 -FVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQA--- 37 G SlGE a g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################