################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:46 2021 # Report_file: c_1201_45.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00357.pdb # 2: usage_00567.pdb # 3: usage_00568.pdb # 4: usage_00569.pdb # 5: usage_00580.pdb # 6: usage_00594.pdb # 7: usage_00885.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 40 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 40 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00357.pdb 1 SFKCSYVVTN--------GLGINVFKDPVADPNKRSKKGR 32 usage_00567.pdb 1 SFKCSYVVTN--------GLGINVFKDPVADPNKRSKKGR 32 usage_00568.pdb 1 SFKCSYVVTN--------GLGINVFKDPVADPNKRSKKGR 32 usage_00569.pdb 1 SFKCSYVVTN--------GLGINVFKDPVADPNKRSKKGR 32 usage_00580.pdb 1 SFKCSYVVTN--------GLGVNVFKDPVADPNKRSKKGR 32 usage_00594.pdb 1 ----VFKFEKVSHSNIHVYKLLYCQHDE----EDVKCD-- 30 usage_00885.pdb 1 SFKCSYVVTN--------GLGINVFKDPVADPNKRSKKGR 32 syvvtn glg nvfkDp nkrskk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################