################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:12 2021 # Report_file: c_0677_59.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00439.pdb # 2: usage_00440.pdb # 3: usage_00441.pdb # 4: usage_00442.pdb # 5: usage_00581.pdb # 6: usage_00582.pdb # 7: usage_00812.pdb # 8: usage_01439.pdb # 9: usage_01526.pdb # 10: usage_01579.pdb # # Length: 61 # Identity: 4/ 61 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 61 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 61 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00439.pdb 1 QLQLLSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLAEVN 56 usage_00440.pdb 1 QLQELSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLAEVN 56 usage_00441.pdb 1 QLQLLSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLA--- 53 usage_00442.pdb 1 QLQLLSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLA--- 53 usage_00581.pdb 1 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLA--- 53 usage_00582.pdb 1 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLA--- 53 usage_00812.pdb 1 QLQLLSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTFNWNGYKVQSEA--- 53 usage_01439.pdb 1 ---EIKADKTTAVANGQDAITYTVKV--MKGDKPVSNQEVTFTTTL----GKLSN----- 46 usage_01526.pdb 1 QLQLQAPSGNTVPARGGLPITQLFRILNPN-KA---PLRLKLRLTYDHFHQSVQEIFEVN 56 usage_01579.pdb 1 QLQLLSPSSSVVPAFNTGTITQVIKVLNPQ-KQ---QLRMRIKLTYNHKGSAMQDLAEVN 56 ps vpA ITq kv p k lr lT q usage_00439.pdb 57 N 57 usage_00440.pdb 57 N 57 usage_00441.pdb - usage_00442.pdb - usage_00581.pdb - usage_00582.pdb - usage_00812.pdb - usage_01439.pdb - usage_01526.pdb 57 N 57 usage_01579.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################