################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:59 2021 # Report_file: c_0835_12.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00774.pdb # 2: usage_01200.pdb # 3: usage_01201.pdb # 4: usage_01202.pdb # 5: usage_01382.pdb # # Length: 90 # Identity: 26/ 90 ( 28.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 90 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 90 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00774.pdb 1 KTFDVCFAQLKAFADAVPS----WDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLK 56 usage_01200.pdb 1 TTEQVVGAQLDAVLAVLSP-DE-AARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLA 58 usage_01201.pdb 1 TTEQVVGAQLDAVLAVLSP-DE-AARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLA 58 usage_01202.pdb 1 TTEQVVGAQLDAVLAVLSP-DE-AARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLA 58 usage_01382.pdb 1 RALDVIGDQLSGSLP----DGVTAENTIIAYEPVWAIGTGLTPTVQDVRAAHAFMREQLI 56 t V gaQL a l a ivvAYEPVWAIGTGk at qaq vHaf Rg L usage_00774.pdb 57 KNVSEEVASKTRIIYGGSVNGGNSAELAKE 86 usage_01200.pdb 59 A-KG--AG-HVSLLYGGSVKADNAAELFGQ 84 usage_01201.pdb 59 A-KG--AG-HVSLLYGGSVKADNAAELFGQ 84 usage_01202.pdb 59 A-KG--AG-HVSLLYGGSVKADNAAELFGQ 84 usage_01382.pdb 57 ERFGAKGA-HLRLLYGGSVKPSNAAELLGV 85 g h llYGGSVk NaAEL g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################