################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:40 2021 # Report_file: c_1344_40.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00076.pdb # 2: usage_00183.pdb # 3: usage_00242.pdb # 4: usage_00250.pdb # 5: usage_00332.pdb # 6: usage_00345.pdb # 7: usage_00501.pdb # 8: usage_00517.pdb # 9: usage_00531.pdb # # Length: 83 # Identity: 0/ 83 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 83 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 75/ 83 ( 90.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 ----------DF------------LEGK-----------------RLTEDVALDETVWNE 21 usage_00183.pdb 1 GLSELVNAAGEKLQDLELGQKNAV-RDFFKELIA----------D--SGKVAYG------ 41 usage_00242.pdb 1 --------------------------TPLAQKMICRRSVMIPAK------TGIW------ 22 usage_00250.pdb 1 ---------------KFIQEKKLI-GRYFDEISQ----------D--TGKYCFG------ 26 usage_00332.pdb 1 ----------------LHFVEPTK-RYA-----------------D---VIVPR------ 17 usage_00345.pdb 1 ---------------KYVQEIRVL-NKFYDVMNE----------D--DRKAWYG------ 26 usage_00501.pdb 1 -------------V-KFIQEKKLI-GRYFDEISQ----------D--TGKYCFG------ 27 usage_00517.pdb 1 -----------------AGEVKAL-DDFYKMLQH----------E--PDRAFYG------ 24 usage_00531.pdb 1 -------------E--KKLLEAYFDEIS-----------------QDTGKFCYG------ 22 usage_00076.pdb 22 D--IE---LDLH----------- 28 usage_00183.pdb 42 ---ES---Q---VRANLEIN--- 52 usage_00242.pdb 23 ---CVNMR----EAGEQIG---- 34 usage_00250.pdb 27 ---VE---D---TLKALEMG--- 37 usage_00332.pdb 18 GGQNP---V---ALEMLAAKALA 34 usage_00345.pdb 27 ---PN---H---VLKAFEL---- 36 usage_00501.pdb 28 ---VE---D---TLKALEMG--- 38 usage_00517.pdb 25 ---LK---Q---VEKANEAM--- 35 usage_00531.pdb 23 ---ID---D---TLKALDLG--- 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################