################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:00:49 2021 # Report_file: c_1007_16.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00001.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00087.pdb # 5: usage_00173.pdb # 6: usage_00174.pdb # 7: usage_00206.pdb # 8: usage_00213.pdb # 9: usage_00214.pdb # 10: usage_00317.pdb # 11: usage_00318.pdb # 12: usage_00329.pdb # 13: usage_00336.pdb # 14: usage_00337.pdb # 15: usage_00345.pdb # 16: usage_00376.pdb # 17: usage_00434.pdb # 18: usage_00441.pdb # 19: usage_00442.pdb # 20: usage_00443.pdb # 21: usage_00447.pdb # 22: usage_00449.pdb # 23: usage_00542.pdb # 24: usage_00543.pdb # 25: usage_00571.pdb # 26: usage_00647.pdb # 27: usage_00648.pdb # 28: usage_00714.pdb # 29: usage_00716.pdb # # Length: 80 # Identity: 4/ 80 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 80 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 80 ( 53.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -TEETVLDPNHLRHLMHTAK-MNRATA-STA---------SSRSHAVTKLELIGRHA--- 45 usage_00085.pdb 1 --EITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 50 usage_00086.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00087.pdb 1 --EITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 50 usage_00173.pdb 1 VTSCKLESEEMVEIILKKANE-----------------H-SSASHSIFIIHLSGSNA--- 39 usage_00174.pdb 1 VTSCKLESEEMVEIILKKAN-KLRST------------H-SSRSHSIFIIHLSGSNA-K- 44 usage_00206.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00213.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAF-SSRSHSVFSVTIHMKET-TI 52 usage_00214.pdb 1 -EEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAF-SSRSHSVFSVTIHMKET-TI 51 usage_00317.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00318.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00329.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00336.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00337.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00345.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00376.pdb 1 VKEVDVEGLDEVLSLLEMGN-AARH-TH----------L-SSRSHTVFTVTLKQRGRA-- 45 usage_00434.pdb 1 VKEVDVEGLDEVLSLLEMGN-AARH-TH----------L-SSRSHTVFTVTLEQRG---- 43 usage_00441.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00442.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKE---- 49 usage_00443.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIH------- 46 usage_00447.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMK----- 48 usage_00449.pdb 1 LSKLAVTSYNDIQDLMDSGN-KPRT------VNE----T-SSRSHAVFNIIFTQKRH-DA 47 usage_00542.pdb 1 -SSFVTKNVKEIEHVMNLGN-QTR----------------SSRSHAIFIITVECSE---- 38 usage_00543.pdb 1 -SSFVTKNVKEIEHVMNLGN-QTRE-------------V-SSRSHAIFIITVECSE---- 40 usage_00571.pdb 1 -SVHLTSQEEDAFSLLFEGE-TNRI-I-ASH-T--MNKN-SSRSHCIFTIYLEAH----- 47 usage_00647.pdb 1 -TTIPISTLEELRMILERGS-ERRHV---SG---TNMNEESSRSHLILSVVIESIDL-Q- 50 usage_00648.pdb 1 -TTIPISTLEELRMILERGS-ERRHV------------E-SSRSHLILSVVIESIDL-Q- 43 usage_00714.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMKET-TI 52 usage_00716.pdb 1 LEEITVHNKDEVYQILEKGA-AKRT-T-AAT-L--MNAY-SSRSHSVFSVTIHMK----- 48 SSrSH usage_00001.pdb 46 ------EISVGSINLVD--- 56 usage_00085.pdb 51 DGEE--LVKIGKLNLVD--- 65 usage_00086.pdb 53 DGEE--LVKIGKLNLVDLAG 70 usage_00087.pdb 51 DGEE--LVKIGKLNLVDLAG 68 usage_00173.pdb 40 ---G--AHSYGTLNLVDLAG 54 usage_00174.pdb 45 --TG--AHSYGTLNLVDLAG 60 usage_00206.pdb 53 DGEE--LVKIGKLNLVDLAG 70 usage_00213.pdb 53 DGEE--LVKIGKLN------ 64 usage_00214.pdb 52 DGEE--LVKIGKLN------ 63 usage_00317.pdb 53 DGEE--LVKIGKLN------ 64 usage_00318.pdb 53 DGEE--LVKIGKLNLVDLA- 69 usage_00329.pdb 53 DGEE--LVKIGKLNLVD--- 67 usage_00336.pdb 53 DGEE--LVKIGKLNLVDLAG 70 usage_00337.pdb 53 DGEE--LVKIGKLNLVD--- 67 usage_00345.pdb 53 DGEE--LVKIGKLN------ 64 usage_00376.pdb 46 ------PLLVSKFH------ 53 usage_00434.pdb 44 ------QLLVSKFHFVD--- 54 usage_00441.pdb 53 DGEE--LVKIGKLNLV---- 66 usage_00442.pdb 50 ---E--LVKIGKLNLVD--- 61 usage_00443.pdb 47 --------KIGKLNLVDLA- 57 usage_00447.pdb 49 -------VKIGKLN------ 55 usage_00449.pdb 48 E-TNITTEKVSKISLV---- 62 usage_00542.pdb 39 ------HIRVGKLNLVD--- 49 usage_00543.pdb 41 ------HIRVGKLN------ 48 usage_00571.pdb 48 ------KYITSKINLVD--- 58 usage_00647.pdb 51 --TQ--SAARGKLSFVDLAG 66 usage_00648.pdb 44 --TQ--SAARGKLSFVDLAG 59 usage_00714.pdb 53 DGEE--LVKIGKLN------ 64 usage_00716.pdb 49 -------VKIGKLNLV---- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################