################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:31 2021 # Report_file: c_1447_196.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00390.pdb # 2: usage_00490.pdb # 3: usage_00518.pdb # 4: usage_00683.pdb # 5: usage_00964.pdb # 6: usage_01037.pdb # 7: usage_01084.pdb # 8: usage_01744.pdb # 9: usage_01905.pdb # 10: usage_02318.pdb # 11: usage_02857.pdb # 12: usage_02964.pdb # 13: usage_03042.pdb # 14: usage_03132.pdb # 15: usage_03564.pdb # 16: usage_03565.pdb # # Length: 16 # Identity: 0/ 16 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 16 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 16 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00390.pdb 1 -YELHPDKWTV----- 10 usage_00490.pdb 1 GYELHPDKWTV----- 11 usage_00518.pdb 1 --ELHPDKWTVQPIVL 14 usage_00683.pdb 1 -YELHPDKWTV----- 10 usage_00964.pdb 1 -YELHPDKWTV----- 10 usage_01037.pdb 1 --ELHPDKWTV----- 9 usage_01084.pdb 1 -YELHPDKWTV----- 10 usage_01744.pdb 1 -YELHPDKWTV----- 10 usage_01905.pdb 1 -YELHPDKWTV----- 10 usage_02318.pdb 1 -YELHPDKWTV----- 10 usage_02857.pdb 1 -LALSPAAPSA----- 10 usage_02964.pdb 1 GYELHPDKWTV----- 11 usage_03042.pdb 1 -YELHPDKWTV----- 10 usage_03132.pdb 1 VVKEKRDRWYV----- 11 usage_03564.pdb 1 -YELHPDKWTV----- 10 usage_03565.pdb 1 -YELHPDKWTV----- 10 l pd w v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################