################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:09:21 2021 # Report_file: c_0538_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00003.pdb # 2: usage_00005.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00024.pdb # 6: usage_00025.pdb # 7: usage_00026.pdb # 8: usage_00027.pdb # 9: usage_00033.pdb # 10: usage_00034.pdb # 11: usage_00043.pdb # 12: usage_00044.pdb # 13: usage_00049.pdb # 14: usage_00051.pdb # # Length: 143 # Identity: 27/143 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/143 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/143 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 SSQNKKAIEELGNLIKANAEAWGADALARLFELHPQTKTYFSKFS-GF-----EACNEQV 54 usage_00005.pdb 1 SDKDKAAVRALWSKIGKSADAIGNDALSRMIVVYPQTKTYFSHWP-DV-----TPGSPHI 54 usage_00019.pdb 1 SATDKARVKALWDKIEGKSAELGAEALGRMLVSFPQTKIYFSEWGQDL-----GPQTPQV 55 usage_00020.pdb 1 SDKDKAAVRALWSKIGKSSDAIGNDALSRMIVVYPQTKIYFSHWP-DV-----TPGSPNI 54 usage_00024.pdb 1 SDKDKAAVRALWSKIGKSADAIGNDALSRMIVVYPQTKTYFSHWP-DV-----TPGSPHI 54 usage_00025.pdb 1 SDKDKAAVRALWSKIGKSADAIGNDALSRMIVVYPQTKTYFSHWP-DV-----TPGSPHI 54 usage_00026.pdb 1 SDKDKAAVRALWSKIGKSADAIGNDALSRMIVVYPQTKTYFSHWP-DV-----TPGSPHI 54 usage_00027.pdb 1 SDKDKAAVRALWSKIGKSADAIGNDALSRMIVVYPQTKTYFSHWP-DV-----TPGSPHI 54 usage_00033.pdb 1 SDKDKSTVKALWGKISKSADAIGADALGRMLAVYPQTKTYFSHWP-DM-----SPGSGPV 54 usage_00034.pdb 1 SDKDKSTVKALWGKISKSADAIGADALGRMLAVYPQTKTYFSHWP-DM-----SPGSGPV 54 usage_00043.pdb 1 SDKDKAAVRALWSKIGKSSDAIGNDALSRMIVVYPQTKIYFSHWP-DV-----TPGSPNI 54 usage_00044.pdb 1 SDKDKAAVRALWSKIGKSSDAIGNDALSRMIVVYPQTKIYFSHWP-DV-----TPGSPNI 54 usage_00049.pdb 1 -DAEKAAVNGLWGKV--NPDDVGGEALGRLLVVYPWTQRYFDSFG-DLSSASAIMGNPKV 56 usage_00051.pdb 1 SDKDKAAVKLLWSKISKSSDAIGNDALSRMIVVYPQTKTYFAHWP-DL-----SPGSPHV 54 K v Lw ki G AL R PqTk YF d usage_00003.pdb 55 KKHGKRVMNALADATHHLDNLHLHLEDLARKHGENLLVDPHNFHLFADCIVVTLAVNLQ- 113 usage_00005.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPANFKILNHCILVVISTMFPK 114 usage_00019.pdb 56 RNHGAVIMAAVGKAVKSIDNLVGGLSQLSELHAFKLRVDPANFKILAHNIILVISMYFPG 115 usage_00020.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPSNFKILNHCILVVISTMFPK 114 usage_00024.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPANFKILNHCILVVISTMFPK 114 usage_00025.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPANFKILNHCILVVISTMFPK 114 usage_00026.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPANFKILNHCILVVISTMFPK 114 usage_00027.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPANFKILNHCILVVISTMFPK 114 usage_00033.pdb 55 KAHGKKVMGGVALAVSKIDDLTTGLGDLSELHAFKMRVDPSNFKILSHCILVVVAKMFPK 114 usage_00034.pdb 55 KAHGKKVMGGVALAVSKIDDLTTGLGDLSELHAFKMRVDPSNFKILSHCILVVVAKMFPK 114 usage_00043.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPSNFKILNHCILVVISTMFPK 114 usage_00044.pdb 55 KAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPSNFKILNHCILVVISTMFPK 114 usage_00049.pdb 57 KAHGKKVINAFNDGLKHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNMIVIVLGHHLGK 116 usage_00051.pdb 55 KAHGKTVMGGIALAVSKIDDLRAGLLDLSEQHAYKLRVDPANFKILSHCILVVISMMFPK 114 k HGk vm a D L l Lse H k VDP NF l I v usage_00003.pdb 114 AFTPVTHCAVDKFLELVAYELSS 136 usage_00005.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00019.pdb 116 DFTPEVHLSVDKFLACLALALSE 138 usage_00020.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00024.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00025.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00026.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00027.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00033.pdb 115 EFTPDAHVSLDKFLASVALALAE 137 usage_00034.pdb 115 EFTPDAHVSLDKFLASVALALAE 137 usage_00043.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00044.pdb 115 EFTPEAHVSLDKFLSGVALALAE 137 usage_00049.pdb 117 EFTPCAQAAFQKVVAGVASALA- 138 usage_00051.pdb 115 EFTPEAHVSLDKFLSGVSLALSE 137 FTP h dKfl va aL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################