################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:04 2021 # Report_file: c_0321_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00006.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00027.pdb # 8: usage_00028.pdb # # Length: 142 # Identity: 128/142 ( 90.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 133/142 ( 93.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/142 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 KEFLKKKQLSPDAVAQLAFQ-AFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 59 usage_00009.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00010.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00022.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00023.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00024.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00027.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 usage_00028.pdb 1 KEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC 60 KEFLKKKQLSPDAVAQLAFQ AFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRC usage_00006.pdb 60 SEAFVRDPSKHSVGELQH--AECSKYHGQLTKEAA-GQGFDRHLYALRYLATARGLNLPE 116 usage_00009.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPE 120 usage_00010.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPE 120 usage_00022.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEATMGQGFDRHLYALRYLATARGLNLPE 120 usage_00023.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEATMGQGFDRHLYALRYLATARGLNLPE 120 usage_00024.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPE 120 usage_00027.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPE 120 usage_00028.pdb 61 SEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPE 120 SEAFVRDPSKHSVGELQH AECSKYHGQLTKEA GQGFDRHLYALRYLATARGLNLPE usage_00006.pdb 117 LYLDPAYQQNHNIL-STSTLN- 136 usage_00009.pdb 121 LYLDPAYQQMNHNILSTSTLN- 141 usage_00010.pdb 121 LYLDPAYQQMNHNILSTSTLN- 141 usage_00022.pdb 121 LYLDPAYQQMNHNILSTSTLNS 142 usage_00023.pdb 121 LYLDPAYQQMNHNILSTSTLNS 142 usage_00024.pdb 121 LYLDPAYQQMNHNILSTST--- 139 usage_00027.pdb 121 LYLDPAYQQMNHNILSTSTLN- 141 usage_00028.pdb 121 LYLDPAYQQMNHNILSTSTLN- 141 LYLDPAYQQmnhni STST #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################