################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:30 2021 # Report_file: c_0982_122.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00287.pdb # 2: usage_00406.pdb # 3: usage_00444.pdb # 4: usage_00783.pdb # 5: usage_00793.pdb # 6: usage_00796.pdb # 7: usage_00956.pdb # 8: usage_01018.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 74 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 74 ( 67.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00287.pdb 1 ----------------VQEIGSGL-VHLGYWL---NKDKVAIKTI--------------- 25 usage_00406.pdb 1 ---------TMKHKLG-------E-VYEGVWK-K-YSLTVAVKTL--KED------TM-E 32 usage_00444.pdb 1 ----IGS-G------G-------L-VHLGYWL---NKDKVAIKTIAM------------S 26 usage_00783.pdb 1 ----------------YAY----DSFAVLGLDLWQVKSGTIFD-N--FL-ITNDEAY--A 34 usage_00793.pdb 1 LKELGTGQF------G-------V-VKYGKWR---GQYDVAIKMI--KEG------S-M- 33 usage_00796.pdb 1 ----GAGEF------G-------E-VYKGMLK--T-EVPVAIKTL--KGY----T--K-Q 30 usage_00956.pdb 1 ---IGSGQF------G-------L-VHLGYWL---NKDKVAIKTI--REG------A-MS 31 usage_01018.pdb 1 LKELGTGQF------G-------V-VKYGKWR---GQYDVAIKMI--KEG------S-M- 33 v g va k usage_00287.pdb 26 EEDFIEEAEVMMKL 39 usage_00406.pdb 33 VEEFLKEAAVMKE- 45 usage_00444.pdb 27 EEDFIEEAEVMMKL 40 usage_00783.pdb 35 EEFGNETWGVTK-- 46 usage_00793.pdb 34 --SEDEFIEE---- 41 usage_00796.pdb 31 RVDFLGEAGIMGQ- 43 usage_00956.pdb 32 EEDFIEEAEVMMK- 44 usage_01018.pdb 34 --SEDEFIEE---- 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################