################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:50:10 2021 # Report_file: c_1219_183.html ################################################################################################ #==================================== # Aligned_structures: 41 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00081.pdb # 4: usage_00082.pdb # 5: usage_00083.pdb # 6: usage_00208.pdb # 7: usage_00210.pdb # 8: usage_00213.pdb # 9: usage_00214.pdb # 10: usage_00217.pdb # 11: usage_00218.pdb # 12: usage_00219.pdb # 13: usage_00220.pdb # 14: usage_00225.pdb # 15: usage_00226.pdb # 16: usage_00228.pdb # 17: usage_00229.pdb # 18: usage_00315.pdb # 19: usage_00839.pdb # 20: usage_00840.pdb # 21: usage_00950.pdb # 22: usage_01181.pdb # 23: usage_01183.pdb # 24: usage_01195.pdb # 25: usage_01199.pdb # 26: usage_01200.pdb # 27: usage_01302.pdb # 28: usage_01303.pdb # 29: usage_01359.pdb # 30: usage_01364.pdb # 31: usage_01372.pdb # 32: usage_01373.pdb # 33: usage_01647.pdb # 34: usage_01648.pdb # 35: usage_01649.pdb # 36: usage_01820.pdb # 37: usage_01821.pdb # 38: usage_01822.pdb # 39: usage_01850.pdb # 40: usage_02047.pdb # 41: usage_02064.pdb # # Length: 55 # Identity: 12/ 55 ( 21.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 55 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 55 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 51 usage_00049.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 51 usage_00081.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 51 usage_00082.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-T----- 48 usage_00083.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 51 usage_00208.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-N----- 48 usage_00210.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-N----- 48 usage_00213.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00214.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00217.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00218.pdb 1 RRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-N----- 49 usage_00219.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00220.pdb 1 RRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-N----- 49 usage_00225.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NY---- 49 usage_00226.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NY---- 49 usage_00228.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00229.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_00315.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 47 usage_00839.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NY---- 49 usage_00840.pdb 1 RRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 52 usage_00950.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01181.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 47 usage_01183.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 53 usage_01195.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 53 usage_01199.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 45 usage_01200.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01302.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_01303.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHL-NYFA-- 51 usage_01359.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01364.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 47 usage_01372.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 51 usage_01373.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01647.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-T----- 48 usage_01648.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 45 usage_01649.pdb 1 -------EDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSN- 46 usage_01820.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01821.pdb 1 --VAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFS-- 50 usage_01822.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 49 usage_01850.pdb 1 RRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TY---- 50 usage_02047.pdb 1 -EATYDIEKVL----PDYEKVVLTVTTDGQITPNEAFQNALEAYKQLSVFDKIT- 49 usage_02064.pdb 1 -RVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHL-TYFSNP 53 Edtr tDldKltLriwTDGsvTPlEAlnqAv il ehl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################