################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:00 2021 # Report_file: c_0098_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00053.pdb # 4: usage_00055.pdb # 5: usage_00056.pdb # 6: usage_00081.pdb # # Length: 194 # Identity: 37/194 ( 19.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/194 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/194 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -KIAVFASGNGSNFQVIAEEF-------PVEFVFSDHRDAYVLERAKQLGVLSYAFELKE 52 usage_00052.pdb 1 -RLVVLASGTGSLLRSLLDAAV-GDYPARVVAVGVDR-ECRAAEIAAEASVPVFTVRLAD 57 usage_00053.pdb 1 -RLVVLASGTGSLLRSLLDAAV-GDYPARVVAVGVDR-ECRAAEIAAEASVPVFTVRLAD 57 usage_00055.pdb 1 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKT 60 usage_00056.pdb 1 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKT 60 usage_00081.pdb 1 -RLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKD 59 r ASG G V D E p usage_00051.pdb 53 FESKADYEAALVELLEEHQIDLVCLAGY-KIVGPTLLSAYEGRIVNIHPAYLPEFPGAHG 111 usage_00052.pdb 58 HPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHG 117 usage_00053.pdb 58 HPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHG 117 usage_00055.pdb 61 YPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHA 120 usage_00056.pdb 61 YPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHA 120 usage_00081.pdb 60 YPSKAAFESEILRELKGRQIDWIALAGY-RLIGPTLLSAYEGKIVNIHPSLLPAFPGKDA 118 pS a D v AG r GP L Gr N HP lLPaFPG h usage_00051.pdb 112 IEDAWNAGVGQSGVTIHWVDSGVDTGQVIKQVRVPRLADDTIDRFEARIHEAEYRLYPEV 171 usage_00052.pdb 118 VADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAA 177 usage_00053.pdb 118 VADALAYGVKVTGATVHLVDA--DTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAA 175 usage_00055.pdb 121 IEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPAT 180 usage_00056.pdb 121 IEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPAT 180 usage_00081.pdb 119 IGQAYRAGVSETGVTVHYVDEG-DTGPVIAQRVVPIVPGEPIEALEERIHQVEHE----- 172 A V tG T H VD DTGp aQ V d e l I E r usage_00051.pdb 172 VKAL---------- 175 usage_00052.pdb 178 VAALAT-------- 183 usage_00053.pdb 176 VAALAT-------- 181 usage_00055.pdb 181 LHKLLSKAENLYFQ 194 usage_00056.pdb 181 LHKLLSKAEN---- 190 usage_00081.pdb -------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################