################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:01 2021 # Report_file: c_0875_10.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00028.pdb # 2: usage_00081.pdb # 3: usage_00082.pdb # 4: usage_00505.pdb # # Length: 229 # Identity: 171/229 ( 74.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 173/229 ( 75.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/229 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ----------------------------------LFQLKRETDDLEQWISEKELVASSPE 26 usage_00081.pdb 1 --------------------------NALENMYHLFQLKRETDDLEQWISEKELVASSPE 34 usage_00082.pdb 1 --------------------------NALENMYHLFQLKRETDDLEQWISEKELVASSPE 34 usage_00505.pdb 1 GEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPE 60 LFQLKRETDDLEQWISEKELVASSPE usage_00028.pdb 27 MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNE 86 usage_00081.pdb 35 MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNE 94 usage_00082.pdb 35 MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNE 94 usage_00505.pdb 61 MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNE 120 MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNE usage_00028.pdb 87 MWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTA---FERELHL 143 usage_00081.pdb 95 MWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE------------KH-FERDVHL 141 usage_00082.pdb 95 MWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE------------KHAFERDVHL 142 usage_00505.pdb 121 MWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRE-----------FERDVHL 169 MWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE FERdvHL usage_00028.pdb 144 LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDAC---- 188 usage_00081.pdb 142 LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRR 190 usage_00082.pdb 143 LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDA----- 186 usage_00505.pdb 170 LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALL------- 211 LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################