################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:39 2021 # Report_file: c_1200_137.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00464.pdb # 2: usage_01089.pdb # 3: usage_01161.pdb # 4: usage_01162.pdb # 5: usage_02899.pdb # 6: usage_04204.pdb # 7: usage_04205.pdb # 8: usage_04206.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 49 ( 34.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 49 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00464.pdb 1 ----WTGMILGP-PRT-IYENRIYSLKIECGPKYP--E--APPFVRFVT 39 usage_01089.pdb 1 NQYECPGLIEVPIENS-DK-SKWVMFLAINP-GSP--LGGSINQYFV-- 42 usage_01161.pdb 1 ---ACPGLIEVPIENS-DK-SKWVMFLAINP-GSP--LGGSINQYFV-- 39 usage_01162.pdb 1 ---ACPGLIEVPIENS-DK-SKWVMFLAINP-GSP--LGGSINQYFV-- 39 usage_02899.pdb 1 ---ECPGLVKLPLDSG-NS-TKWVITSGLNP-GGPPGTVGSGTQYFV-- 41 usage_04204.pdb 1 ---ECPGLIEVPTEQDPSK-SYWVMFISINP-GAP--AGGSFNQYFV-- 40 usage_04205.pdb 1 ---ECPGLIEVPTEQDPSK-SYWVMFISINP-GAP--AGGSFNQYFV-- 40 usage_04206.pdb 1 ---ECPGLIEVPTEQDPSK-SYWVMFISINP-GAP--AGGSFNQYFV-- 40 cpGli P wv np g P s qyfv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################