################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:07 2021 # Report_file: c_0173_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00013.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00252.pdb # 9: usage_00253.pdb # 10: usage_00254.pdb # 11: usage_00255.pdb # 12: usage_00278.pdb # 13: usage_00279.pdb # 14: usage_00280.pdb # 15: usage_00329.pdb # # Length: 205 # Identity: 13/205 ( 6.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/205 ( 17.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/205 ( 16.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----D--AARYVHL 54 usage_00019.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00020.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00021.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00022.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00023.pdb 1 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG----TPDQIQFFQH 56 usage_00024.pdb 1 -KLIIITGAGGVLCSFLAKQLAYTKANIALLDLNFEAADKVAKEINQSG-G--KAKAYKT 56 usage_00252.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00253.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00254.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00255.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00278.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00279.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00280.pdb 1 -KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----K--KARAIAA 53 usage_00329.pdb 1 -RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN--IVRAVVC 57 k a tG g g a ga v A usage_00013.pdb 55 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-I----------------GTIEDYALT 97 usage_00019.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00020.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00021.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00022.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00023.pdb 57 DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-N----------------KSVEETTTA 99 usage_00024.pdb 57 NVLELENIKEVRNQIETDFGTCDILINGAGGNNPKATTDNEFHQFDLNETTRTFFDLDKS 116 usage_00252.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00253.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00254.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00255.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00278.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00279.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00280.pdb 54 DISDPGSVKALFAEIQALTGGIDILVNNASIVP-F----------------VAWDDVDLD 96 usage_00329.pdb 58 DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPP----------------VPLEEVTFE 101 d g LvNnA usage_00013.pdb 98 EWQRILDVNLTGVFLGIRAVVKPMKEA--GRGSIINISSIEGLAGTVACHGYTATKFAVR 155 usage_00019.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00020.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00021.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00022.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00023.pdb 100 EWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGASIINMSSIEGFVGDPSLGAYNASKGAVR 158 usage_00024.pdb 117 GIEFVFNLNYLGSLLPTQVFAKD-LG--KQGANIINISS-NAFTPLTKIPAYSGAKAAIS 172 usage_00252.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQ-RAA-GKAGRVISIASNTFFAGTPN-AAYVAAKGGVI 153 usage_00253.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQ-RAA-GKAGRVISIASNTFFAGTPN-AAYVAAKGGVI 153 usage_00254.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQ-RAA-GKAGRVISIASNTFFAGTPN-AAYVAAKGGVI 153 usage_00255.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQ-RAA-GKAGRVISIASNTFFAGTPN-AAYVAAKGGVI 153 usage_00278.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00279.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00280.pdb 97 HWRKIIDVNLTGTFIVTRAGTDQMRAA-GKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 155 usage_00329.pdb 102 QWNGIVAANLTGAFLCTQHAFR--KAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAIT 159 w Nl G f t I S Y a K usage_00013.pdb 156 GLTKSTALELGPSG--IRVNSIHPG 178 usage_00019.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00020.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00021.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00022.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00023.pdb 159 IMSKSAALDCALKDYDVRVNTVHPG 183 usage_00024.pdb 173 NFTQWLAVYFSKVG--IRCNAIAPG 195 usage_00252.pdb 154 GFTRALATELGKYN--ITANAVTPG 176 usage_00253.pdb 154 GFTRALATELGKYN--ITANAVTPG 176 usage_00254.pdb 154 GFTRALATELGKYN--ITANAVTPG 176 usage_00255.pdb 154 GFTRALATELGKYN--ITANAVTPG 176 usage_00278.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00279.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00280.pdb 156 GFTRALATELGKYN--ITANAVTPG 178 usage_00329.pdb 160 GLTKSTALDGR-HD--IACGQIDIG 181 t A i n pG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################