################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:06 2021 # Report_file: c_0669_78.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00306.pdb # 2: usage_00307.pdb # 3: usage_00308.pdb # 4: usage_00309.pdb # 5: usage_00310.pdb # 6: usage_00311.pdb # 7: usage_00332.pdb # 8: usage_00333.pdb # 9: usage_00426.pdb # 10: usage_00427.pdb # 11: usage_01099.pdb # 12: usage_01100.pdb # 13: usage_01712.pdb # 14: usage_01713.pdb # # Length: 80 # Identity: 31/ 80 ( 38.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 80 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 80 ( 11.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00306.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00307.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00308.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00309.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00310.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00311.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00332.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00333.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_00426.pdb 1 ---KVLITYDSSAKLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGAS---- 53 usage_00427.pdb 1 ---KVLITYDSSAKLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGAS---- 53 usage_01099.pdb 1 ---NIVITYQASTKALAASLVFPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLN---- 53 usage_01100.pdb 1 ---NIVITYQASTKALAASLVFPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLN---- 53 usage_01712.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 usage_01713.pdb 1 GIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQ 60 I Y S K L LV P T VDL LPE V GFSA TG usage_00306.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00307.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00308.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00309.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00310.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00311.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00332.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00333.pdb 61 RNATETHDILSWSFSASLP- 79 usage_00426.pdb 54 SGYIETHDVFSWSFASKLS- 72 usage_00427.pdb 54 SGYIETHDVFSWSFASKLSF 73 usage_01099.pdb 54 AGVVETHDIVSWSFAVSLA- 72 usage_01100.pdb 54 AGVVETHDIVSWSFAVSL-- 71 usage_01712.pdb 61 RNATETHDILSWSFSASLP- 79 usage_01713.pdb 61 RNATETHDILSWSFSASLP- 79 ETHD SWSF L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################