################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:26 2021 # Report_file: c_1189_44.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00148.pdb # 2: usage_00169.pdb # 3: usage_00216.pdb # 4: usage_00447.pdb # 5: usage_00653.pdb # 6: usage_00679.pdb # 7: usage_01023.pdb # 8: usage_01071.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 46 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 46 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00148.pdb 1 LQA---KGVGTVAA--PR-GALGHWIRIK-DGRIENYQCVV----- 34 usage_00169.pdb 1 --A---RGVGFADV--SR-GGLSHWMTIE-DGKIDNFQLVV----- 32 usage_00216.pdb 1 ---LQI----RGIKKTDEGTYRCEGRILAR----GEINFKDIQVIV 35 usage_00447.pdb 1 ------IGCGFHEA--VR-GVLSHHLVIR-DGKIANYHPYPP---- 32 usage_00653.pdb 1 -------GIGAIEA--PR-GLDVHMAKVE-NGKIQFYSALV----- 30 usage_00679.pdb 1 LQA---KGVGTVAA--PR-GALGHWIRIK-DGRIENYQCVV----- 34 usage_01023.pdb 1 LQA---KGVGTVAA--PR-GALGHWIRIK-DGRIENYQCVV----- 34 usage_01071.pdb 1 LQA---KGVGTVAA--PR-GALGHWIRIK-DGRIENYQCVV----- 34 r g h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################