################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:58 2021 # Report_file: c_1488_67.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00622.pdb # 2: usage_01048.pdb # 3: usage_01049.pdb # 4: usage_01050.pdb # 5: usage_01051.pdb # 6: usage_01052.pdb # 7: usage_02547.pdb # 8: usage_03527.pdb # 9: usage_03528.pdb # 10: usage_03529.pdb # 11: usage_03530.pdb # 12: usage_03531.pdb # 13: usage_03532.pdb # 14: usage_03533.pdb # 15: usage_03534.pdb # 16: usage_03535.pdb # 17: usage_03536.pdb # 18: usage_07105.pdb # 19: usage_07622.pdb # 20: usage_07875.pdb # # Length: 19 # Identity: 4/ 19 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 19 ( 68.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 19 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00622.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_01048.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_01049.pdb 1 GVQGYVFGVERIAALAGAG 19 usage_01050.pdb 1 GVQGYVFGVERIAALAGA- 18 usage_01051.pdb 1 GVQGYVFGVERIAA----- 14 usage_01052.pdb 1 GVQGYVFGVERIAALAGA- 18 usage_02547.pdb 1 GVQGYVFGVERIAAL---- 15 usage_03527.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03528.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03529.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03530.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03531.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03532.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03533.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03534.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03535.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_03536.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_07105.pdb 1 -LTAIRAGIDGIAAEFG-- 16 usage_07622.pdb 1 GVQGYVFGVERIAALAG-- 17 usage_07875.pdb 1 GVQGYVFGVERIAA----- 14 vqgyvfGverIAA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################