################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:40 2021 # Report_file: c_0650_125.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00136.pdb # 2: usage_00137.pdb # 3: usage_00453.pdb # 4: usage_00506.pdb # 5: usage_00765.pdb # 6: usage_00766.pdb # # Length: 61 # Identity: 9/ 61 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 61 ( 19.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 61 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 AFHFNPRFE----EGGYVVCNTKQNGQWGPEERKMQMPFQKGMPFELCFLVQRSEFKVMV 56 usage_00137.pdb 1 AFHFNPRFE----EGGYVVCNTKQNGQWGPEERKMQMPFQKGMPFELCFLVQRSEFKVMV 56 usage_00453.pdb 1 ICHCNPRFEYSVDK-NTIVLNSKQNDVWDIEKKETAFPFKSGSETMLIFDFEDCITVH-L 58 usage_00506.pdb 1 CLHFNPRFNAHGDA-NTIVCNSKDDGTWGTEQRETAFPFQPGSITEVCITFDQADLTIKL 59 usage_00765.pdb 1 PLHISVRFD----E-GKIVFNTFSKGEWGKEERK-SNPYKKGDDIDIRIRAHDSKFSISV 54 usage_00766.pdb 1 -LHISVRFD----E-GKIVFNTFSKGEWGKEERK-SNPYKKGDDIDIRIRAHDSKFSISV 53 H RF V N g Wg E r P G usage_00136.pdb - usage_00137.pdb - usage_00453.pdb 59 P 59 usage_00506.pdb - usage_00765.pdb - usage_00766.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################