################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:00 2021 # Report_file: c_0870_71.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00003.pdb # 2: usage_00068.pdb # 3: usage_00418.pdb # 4: usage_00419.pdb # # Length: 81 # Identity: 2/ 81 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 81 ( 18.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 81 ( 34.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ---NTEAALTHVFA---NLYRQRLAAGVPQPEVLPLGTQDI-ARTSS-SRETVSRVLKRL 52 usage_00068.pdb 1 -LGLLCHKFLARYPNYPN---------PA--V-NNDICLDEVAEELNVERRRIYDIVNVL 47 usage_00418.pdb 1 PSVALAARVLKLLS---R---------HK--Y-RQSTLTEIAERLGV-NKTTCLRVLRTL 44 usage_00419.pdb 1 -SVALAARVLKLLS---R---------HK--Y-RQSTLTEIAERLGV-NKTTCLRVLRTL 43 l a l i r t rvl L usage_00003.pdb 53 EAHNILEVSP-RSVTLLD--- 69 usage_00068.pdb 48 ESLHMVSRLA-KNRYTWH--- 64 usage_00418.pdb 45 EREDFVSYDPQS-RR---YSL 61 usage_00419.pdb 44 EREDFVSYDPQS-RR---YSL 60 E vs p r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################