################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:04:04 2021 # Report_file: c_0559_17.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00036.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00092.pdb # 12: usage_00093.pdb # 13: usage_00112.pdb # 14: usage_00121.pdb # 15: usage_00122.pdb # 16: usage_00124.pdb # 17: usage_00131.pdb # 18: usage_00135.pdb # 19: usage_00145.pdb # 20: usage_00196.pdb # 21: usage_00197.pdb # 22: usage_00198.pdb # 23: usage_00217.pdb # 24: usage_00218.pdb # # Length: 80 # Identity: 1/ 80 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 80 ( 5.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 80 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00004.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00005.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00006.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00023.pdb 1 --------GEEFDEFPS-DRRKGVKSVVNLVGEKLVYVQKW--DGKETTYVREIKDGKLV 49 usage_00024.pdb 1 --------GEEFDEFPSDRRKG-VKSVVNLVGEKLVYVQKW--DGKETTYVREIKDGKLV 49 usage_00036.pdb 1 --------GQEFDEVTA-DDRK-VKSTITLDGGVLVHVQKW--DGKSTTIKRKREDDKLV 48 usage_00061.pdb 1 --------GVEFDETTA-DDRK-VKSIVTLDGGKLVHLQKW--DGQETTLVRELIDGKLI 48 usage_00062.pdb 1 -----------FDEETV-DGRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00063.pdb 1 -----------FDEETV-DGRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00092.pdb 1 -----------FDEVTA-DDRK-VKSTITLDGGVLVHVQKW--DGKSTTIKRKREDDKLV 45 usage_00093.pdb 1 NTEISFILGQEFDEVTA-DDRK-VKSTITLDGGVLVHVQKW--DGKSTTIKRKREDDKLV 56 usage_00112.pdb 1 NTEISFILGQEFDEVTA-DDRK-VKSTITLDGGVLVHVQKW--DGKSTTIKRKREDDKLV 56 usage_00121.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00122.pdb 1 -----------FDEITA-DDRK-VKSIITLDGGALVQVQKW--DGKSTTIKRKRDGDKLV 45 usage_00124.pdb 1 -----------FDETTA-DNRK-VKSTITLENGSMIHVQKW--LGKETTIKRKIVDEKMV 45 usage_00131.pdb 1 --------GVEFDDVIG-AGDS-VKSMYTVDGNVVTHVVKG--DAGVATFKKEYNGDDLV 48 usage_00135.pdb 1 -----------FDEVTA-DDRK-VKSTITLDGGVLVHVQKW--DGKSTTIKRKREDDKLV 45 usage_00145.pdb 1 -----------FAYSLA-DGTE-LTGTWTMEGNKLVGKFKRVDNGKELIAVREISGNELI 47 usage_00196.pdb 1 -----------FEETTA-DNRK-TKSTVTLARGSLNQVQKW--NGNETTIKRKLVDGKMV 45 usage_00197.pdb 1 -----------FEETTA-DNRK-TKSTVTLARGSLNQVQKW--NGNETTIKRKLVDGKMV 45 usage_00198.pdb 1 -----------FEETTA-DNRK-TKSTVTLARGSLNQVQKW--NGNETTIKRKLVDGKMV 45 usage_00217.pdb 1 -----------FEETTA-DGRK-TQTVCNFTDGALVQHQEW--DGKESTITRKLKDGKLV 45 usage_00218.pdb 1 -----------FEETTA-DGRK-TQTVCNFTDGALVQHQEW--DGKESTITRKLKDGKLV 45 F g t r usage_00001.pdb 46 VEVMK--G-VTSTRVYER-- 60 usage_00004.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00005.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00006.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00023.pdb 50 VTLTM--GDVVAVRSYRR-- 65 usage_00024.pdb 50 VTLTM--GDVVAVRSYRR-- 65 usage_00036.pdb 49 VECVM--KGVTSTRVYER-- 64 usage_00061.pdb 49 LTLTH--GTAVCTRTYEK-- 64 usage_00062.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00063.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00092.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00093.pdb 57 VECVM--------------- 61 usage_00112.pdb 57 VECVM--------------- 61 usage_00121.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00122.pdb 46 VEVMK--G-VTSTRVYER-- 60 usage_00124.pdb 46 VECKM--NNIVSTRIYEK-- 61 usage_00131.pdb 49 VTITSSNWDGVARRYYKA-- 66 usage_00135.pdb 46 VECVM--KGVTSTRVYER-- 61 usage_00145.pdb 48 QTYTY--EGVEAKRIFKK-- 63 usage_00196.pdb 46 VECKM--KDVVCTRIYEK-- 61 usage_00197.pdb 46 VECKM--KDVVCTRIYE--- 60 usage_00198.pdb 46 VECKM--KDVVCTRIYEK-- 61 usage_00217.pdb 46 VECVM--NNVTCTRIYE--- 60 usage_00218.pdb 46 VECVM--NNVTCTRIYEKVE 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################