################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:23 2021 # Report_file: c_1426_34.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00163.pdb # 2: usage_00166.pdb # 3: usage_00167.pdb # 4: usage_00168.pdb # 5: usage_00169.pdb # 6: usage_00431.pdb # 7: usage_00433.pdb # 8: usage_00764.pdb # 9: usage_00765.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 68 ( 51.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 68 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 SK-QDLLERLRKLEFDISED------EIF--TSLTAARSLLERKQVRPMLLVDDRALPDF 51 usage_00166.pdb 1 ----IEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 45 usage_00167.pdb 1 ---EIEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 46 usage_00168.pdb 1 ----IEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 45 usage_00169.pdb 1 ---EIEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 46 usage_00431.pdb 1 -----EDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 44 usage_00433.pdb 1 -----EDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNKDFQ--------NAFKIHNA 44 usage_00764.pdb 1 --PDVEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNRDFQ--------NAFKIHNA 47 usage_00765.pdb 1 ----VEDLFSSLKH---IQHTLVDSQSQEDISLLLQLVQNRDFQ--------NAFKIHNA 45 edlfsslkh iqh sqe slLlqlvqn dfq nafkihna usage_00163.pdb 52 K------- 52 usage_00166.pdb 46 ITVHMN-- 51 usage_00167.pdb 47 ITVHMN-- 52 usage_00168.pdb 46 ITVHMNK- 52 usage_00169.pdb 47 ITVHMNK- 53 usage_00431.pdb 45 ITVHMN-- 50 usage_00433.pdb 45 ITVHMNKA 52 usage_00764.pdb 48 VT------ 49 usage_00765.pdb 46 VT------ 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################