################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:56 2021 # Report_file: c_1376_74.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00182.pdb # 2: usage_00183.pdb # 3: usage_00289.pdb # 4: usage_00290.pdb # 5: usage_00322.pdb # 6: usage_00323.pdb # 7: usage_00346.pdb # 8: usage_00392.pdb # 9: usage_00397.pdb # 10: usage_00574.pdb # 11: usage_00575.pdb # 12: usage_00766.pdb # 13: usage_00767.pdb # 14: usage_00805.pdb # 15: usage_00841.pdb # 16: usage_00959.pdb # 17: usage_01311.pdb # # Length: 54 # Identity: 7/ 54 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 54 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 54 ( 40.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLSLEE- 36 usage_00183.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLSLEE- 36 usage_00289.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLNLQET 37 usage_00290.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLNLQET 37 usage_00322.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKILDLEE- 36 usage_00323.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKILDLEE- 36 usage_00346.pdb 1 ----------------GEAARFKYIENLVLNNF--DTAKEVEPVPDRVIILENN 36 usage_00392.pdb 1 ------------IQMVLEAAKFKFIEQKVIHSIMDME-D-FT-PGLAMLSLEEN 39 usage_00397.pdb 1 ----VPTSFLVLIQMVLEAAKFKFIEQKVIHSIMDME-D-FT-PGLAMLSLEEN 47 usage_00574.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKVLDLEE- 36 usage_00575.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKVLDLEEN 37 usage_00766.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLSLEE- 36 usage_00767.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-A-FN-PNPKVLSLEE- 36 usage_00805.pdb 1 -PTEIASSLLVVIQMVSEAARFTFIENQIRNNF--QQ-R-IR-PANNTISLENK 48 usage_00841.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKILDLEEN 37 usage_00959.pdb 1 NAEAAASALLVLIQTTSEAARFRYIELQIANNV--GT-K-FK-PSQTIISLENN 49 usage_01311.pdb 1 ------------IQMVSEAARFKYIENQVKTNF--NR-D-FS-PNDKVLDLEE- 36 EAA F IE p L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################