################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:02 2021 # Report_file: c_0089_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00032.pdb # 7: usage_00033.pdb # 8: usage_00043.pdb # 9: usage_00058.pdb # 10: usage_00059.pdb # 11: usage_00060.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # # Length: 182 # Identity: 141/182 ( 77.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/182 ( 87.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/182 ( 12.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ------------------PFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 42 usage_00003.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00029.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00030.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00031.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00032.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00033.pdb 1 PTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 60 usage_00043.pdb 1 ------------------PFVAVSIGFLVNKEMEFGIVYSCVEDKMYTGRKGKGAFCNGQ 42 usage_00058.pdb 1 -------------------FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 41 usage_00059.pdb 1 ------------------PFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 42 usage_00060.pdb 1 ----------------------VSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 38 usage_00061.pdb 1 ------------------PFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 42 usage_00062.pdb 1 ------------------PFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQ 42 VSIGFaVNKkiEFGvVYSCVEgKMYTaRKGKGAFCNGQ usage_00002.pdb 43 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 102 usage_00003.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00029.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00030.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00031.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00032.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00033.pdb 61 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 120 usage_00043.pdb 43 KLQVSQQEDITKSLLVTELGSSRKPETLRIVLSNMEKLCSIPIHGIRSVGTAAVNMCLVA 102 usage_00058.pdb 42 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 101 usage_00059.pdb 43 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 102 usage_00060.pdb 39 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 98 usage_00061.pdb 43 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 102 usage_00062.pdb 43 KLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVA 102 KLQVSQQEDITKSLLVTELGSSRtPETvRmVLSNMEKLfcIPvHGIRSVGTAAVNMCLVA usage_00002.pdb 103 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 162 usage_00003.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00029.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00030.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00031.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00032.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00033.pdb 121 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 180 usage_00043.pdb 103 TGGADAYYEMGIHCWDMAGAGIIVTEAGGVLMDVTGGPFDLMSRRIIAANSITLAKRIAK 162 usage_00058.pdb 102 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 161 usage_00059.pdb 103 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 162 usage_00060.pdb 99 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 158 usage_00061.pdb 103 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 162 usage_00062.pdb 103 TGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAK 162 TGGADAYYEMGIHCWDvAGAGIIVTEAGGVLMDVTGGPFDLMSRRvIAANnriLAeRIAK usage_00002.pdb 163 EI 164 usage_00003.pdb 162 E- 162 usage_00029.pdb 162 E- 162 usage_00030.pdb 162 E- 162 usage_00031.pdb 162 E- 162 usage_00032.pdb 162 EI 163 usage_00033.pdb 181 E- 181 usage_00043.pdb 163 EI 164 usage_00058.pdb 162 E- 162 usage_00059.pdb 163 E- 163 usage_00060.pdb 159 EI 160 usage_00061.pdb 163 EI 164 usage_00062.pdb 163 E- 163 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################