################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:30 2021 # Report_file: c_1445_1448.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_04131.pdb # 2: usage_05634.pdb # 3: usage_06592.pdb # 4: usage_06995.pdb # 5: usage_08349.pdb # 6: usage_08350.pdb # 7: usage_08443.pdb # 8: usage_08534.pdb # 9: usage_09906.pdb # 10: usage_12204.pdb # 11: usage_13199.pdb # 12: usage_13974.pdb # 13: usage_14258.pdb # 14: usage_14259.pdb # 15: usage_15698.pdb # 16: usage_16916.pdb # # Length: 28 # Identity: 11/ 28 ( 39.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 28 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 28 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_04131.pdb 1 --------HMTHHAVSDHEATLRCWALS 20 usage_05634.pdb 1 ----APKTHMTHHAVSDHEATLRCWA-- 22 usage_06592.pdb 1 --------HVTHHPVSDHEATLRCWALG 20 usage_06995.pdb 1 ----APKTHMTHHAVSDHEATLRCWA-- 22 usage_08349.pdb 1 ----APKTHMTHHAVSDHEATLRCWALS 24 usage_08350.pdb 1 QRTDAPKTHMTHHAVSDHEATLRCW--- 25 usage_08443.pdb 1 -RTDAPKTHMTHHAVSDHEATLRCWA-- 25 usage_08534.pdb 1 ----PPKTHMTHHPISDHEATLRCWA-- 22 usage_09906.pdb 1 --------HMTHHAVSDHEATLRCWALS 20 usage_12204.pdb 1 ---EPPKTHVTHHPISDHEATLRCWALG 25 usage_13199.pdb 1 ---DPPKTHVTHHPISDHEVTLRCWAL- 24 usage_13974.pdb 1 ----APKTHMTHHAVSDHEATLRCWA-- 22 usage_14258.pdb 1 ----PPKTHMTHHPISDHEATLRCWALG 24 usage_14259.pdb 1 ----PPKTHMTHHPISDHEATLRCWALG 24 usage_15698.pdb 1 QRTDAPKTHMTHHAVSDHEATLRCW--- 25 usage_16916.pdb 1 ----SPKAHVTHHPRSKGEVTLRCWA-- 22 H THH SdhE TLRCW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################