################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:10 2021 # Report_file: c_0243_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00175.pdb # 2: usage_00182.pdb # 3: usage_00183.pdb # 4: usage_00212.pdb # 5: usage_00213.pdb # 6: usage_00241.pdb # 7: usage_00242.pdb # 8: usage_00243.pdb # 9: usage_00244.pdb # 10: usage_00262.pdb # 11: usage_00288.pdb # 12: usage_00290.pdb # # Length: 140 # Identity: 10/140 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/140 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/140 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00175.pdb 1 --KILVVDDEESIVTLLQYNLERSGYDV-ITASD-GEEA---LKKAETEKPDLIVLDVM- 52 usage_00182.pdb 1 --RVLVVDDDSDVLASLERGLRLSGFEV-ATAVD-GAEA---LRSATENRPDAIVLDIN- 52 usage_00183.pdb 1 --RVLVVDDDSDVLASLERGLRLSGFEV-ATAVD-GAEA---LRSATENRPDAIVLDIN- 52 usage_00212.pdb 1 --KILIVEDDERLARLTQEYLIRNGLEV-GVETD-GNRA---IRRIISEQPDLVVLDVM- 52 usage_00213.pdb 1 --KILIVEDDERLARLTQEYLIRNGLEV-GVETD-GNRA---IRRIISEQPDLVVLDVM- 52 usage_00241.pdb 1 --GVLIVEDGRLAAATLRIQLESLGYDVLGVFDN-GEEA---VRCAPDLRPDIALVDIM- 53 usage_00242.pdb 1 -QRILVVDDDASLAEMLTIVLRGEGFDT-AVIGD-GTQA---LTAVRELRPDLVLLDLM- 53 usage_00243.pdb 1 -QRILVVDDDASLAEMLTIVLRGEGFDT-AVIGD-GTQA---LTAVRELRPDLVLLDLM- 53 usage_00244.pdb 1 -QRILVVDDDASLAEMLTIVLRGEGFDT-AVIGD-GTQA---LTAVRELRPDLVLLDLM- 53 usage_00262.pdb 1 -QRILVIEDDHDIANVLR-DLTDAGYVV-DHADS-A-NG---LIKAREDHPDLILLDLGL 52 usage_00288.pdb 1 SMRVLLIEDDSAIAQSIELMLKSESFNV-YTTDLGE--EGIDLGKLY--DYDIILLDLNL 55 usage_00290.pdb 1 -NKILLVDDDRELTSLLKELLEMEGFNV-IVAHD-GEQA---LDLLDD-SIDLLLLDVM- 52 L D L g D lD usage_00175.pdb 53 -LPK-LDGIEVCKQLRQQKLMFPILMLTAKDEEF-DKVLGLELGADD--YMTKPFSPREV 107 usage_00182.pdb 53 -MPV-LDGVSVVTALRAMDNDVPVCVLSARSSV-DDRVAGLEAGADD--YLVKPFVLAEL 107 usage_00183.pdb 53 -MPV-LDGVSVVTALRAMDNDVPVCVLSARSSV-DDRVAGLEAGADD--YLVKPFVLAEL 107 usage_00212.pdb 53 -LPG-ADGLTVCREVRPH-YHQPILMLTAR-TEDMDQVLGLEMGADD--YVAKPVQPRVL 106 usage_00213.pdb 53 -LPG-ADGLTVCREVRPH-YHQPILMLTAR-TEDMDQVLGLEMGADD--YVAKPVQPRVL 106 usage_00241.pdb 54 -LCGALDGVETAARLAAG-CNLPIIFITSS-QDVETFQRAKRVNPFG--YLAKPVAADTL 108 usage_00242.pdb 54 -LPG-MNGIDVCRVLRAD-SGVPIVMLTAKTDTV-DVVLGLESGADD--YIMKPFKPKEL 107 usage_00243.pdb 54 -LPG-MNGIDVCRVLRAD-SGVPIVMLTAKTDTV-DVVLGLESGADD--YIMKPFKPKEL 107 usage_00244.pdb 54 -LPG-MNGIDVCRVLRAD-SGVPIVMLTAKTDTV-DVVLGLESGADD--YIMKPFKPKEL 107 usage_00262.pdb 53 -PDF--DGGDVVQRLRKN-SALPIIVLTAR-DTVEEKVRLLGLGADD--YLIKPFHPDEL 105 usage_00288.pdb 56 P--D-MSGYEVLRTLRLSKVKTPILILSGM---AGIEDKVRGLGFGADDYMTKPFHKDEL 109 usage_00290.pdb 53 -MPK-KNGIDTLKALRQT-HQTPVIMLT-----L-DRVLGLELGADD--YLPKPFNDREL 101 G r P l g Y KP l usage_00175.pdb 108 NARVKAILRR---------- 117 usage_00182.pdb 108 VARVKALLRR---------- 117 usage_00183.pdb 108 VARVKALLRR---------- 117 usage_00212.pdb 107 LARIRALLR----------- 115 usage_00213.pdb 107 LARIRALLRRT--------- 117 usage_00241.pdb 109 HRSIEMAIHKKKLEE----- 123 usage_00242.pdb 108 VARVRARL------------ 115 usage_00243.pdb 108 VARVRARL------------ 115 usage_00244.pdb 108 VARVRAR------------- 114 usage_00262.pdb 106 LARVKVQL------------ 113 usage_00288.pdb 110 IARIHAIVRR---------- 119 usage_00290.pdb 102 VARIRAILRRSHWSEQKLAA 121 ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################