################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:18 2021 # Report_file: c_0550_5.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00041.pdb # 2: usage_00210.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00242.pdb # 6: usage_00308.pdb # 7: usage_00309.pdb # 8: usage_00338.pdb # 9: usage_00415.pdb # 10: usage_00424.pdb # # Length: 151 # Identity: 20/151 ( 13.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/151 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/151 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 -VKEFALPVPSYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILV 59 usage_00210.pdb 1 -VQALSLPVPSLVICELLGVPYTDHDFFQSRTTMMVSR-TSMEDRRRAFAELRAYIDDLI 58 usage_00219.pdb 1 LVSQFALPVPSMVICRLLGVPYADHEFFQDASKRLVQS-TDAQSALTARNDLAGYLDGLI 59 usage_00220.pdb 1 LVSQFALPVPSMVICRLLGVPYADHEFFQDASKRLVQS-TDAQSALTARNDLAGYLDGLI 59 usage_00242.pdb 1 LVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQLV 60 usage_00308.pdb 1 ---------------------YADHEFFQDASKRLVQS-TDAQSALTARNDLAGYLDGLI 38 usage_00309.pdb 1 LVSQFALPVPSMVICRLLGVPYADHEFFQDASKRLVQS-TDAQSALTARNDLAGYLDGLI 59 usage_00338.pdb 1 LVSAFALPLPSMVICALLGVPYADHDFFESQSRRLLRG-PGIAEVQDARAQLDDYLYALI 59 usage_00415.pdb 1 -VKEFALPVPSYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILV 59 usage_00424.pdb 1 LVSQFALPVPSMVICRLLGVPYADHEFFQDASKRLVQS-TDAQSALTARNDLAGYLDGLI 59 d A L yl L usage_00041.pdb 60 EQRLVEPKDDIISKLCTEQVKPG-NIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQH 118 usage_00210.pdb 59 TRKESEPGDDLFSRQIARQR-QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSH 117 usage_00219.pdb 60 TQFQTEPGAGLVGALVADQLANG-EIDREELISTAMLLLIAGHETTASMTSLSVITLLDH 118 usage_00220.pdb 60 TQFQTEPGAGLVGALVADQLANG-EIDREELISTAMLLLIAGHETTASMTSLSVITLLDH 118 usage_00242.pdb 61 QERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDS 119 usage_00308.pdb 39 TQFQTEPGAGLVGALVADQLANG-EIDREELISTAMLLLIAGHETTASMTSLSVITLLDH 97 usage_00309.pdb 60 TQFQTEPGAGLVGALVADQLANG-EIDREELISTAMLLLIAGHETTASMTSLSVITLLDH 118 usage_00338.pdb 60 DRKRKEPGDGLLDDLIQEQLNRG-TVDRAELVSLATLLLIAGHETTANMISLGTFTLLRH 118 usage_00415.pdb 60 EQRLVEPKDDIISKLCTEQVKPG-NIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQH 118 usage_00424.pdb 60 TQFQTEPGAGLVGALVADQLANG-EIDREELISTAMLLLIAGHETTASMTSLSVITLLDH 118 eP l q g D A lLL Ag T M L L h usage_00041.pdb 119 PDQLAQLKANPSLAPQFVEELCRYHT----- 144 usage_00210.pdb 118 PEQLTVVKANPGRTPMAVEELLRYFTIADGV 148 usage_00219.pdb 119 PEQYAALRADRSLVPGAVEELLRY------- 142 usage_00220.pdb 119 PEQYAALRADRSLVPGAVEELLRY------- 142 usage_00242.pdb 120 PDQLALLREDPSLVGNAVEELLRYLT----- 145 usage_00308.pdb 98 PEQYAALRADRSLVPGAVEELLRY------- 121 usage_00309.pdb 119 PEQYAALRADRSLVPGAVEELLRY------- 142 usage_00338.pdb 119 PEQLAELRAEPGLMPAAVEELLRFL------ 143 usage_00415.pdb 119 PDQLAQLKANPSLAPQFVEELCRY------- 142 usage_00424.pdb 119 PEQYAALRADRSLVPGAVEELLRY------- 142 P Q a l a l p VEEL Ry #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################