################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:06 2021 # Report_file: c_1012_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00254.pdb # 2: usage_00255.pdb # 3: usage_00397.pdb # 4: usage_00454.pdb # 5: usage_00455.pdb # 6: usage_00620.pdb # # Length: 103 # Identity: 13/103 ( 12.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/103 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/103 ( 54.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00254.pdb 1 --VNIGVVGHVDHGKTTLVQAITG--------IWTS-K----------TIKLGYAETNIG 39 usage_00255.pdb 1 --VNIGVVGHVDHGKTTLVQAITG--------IWTS-K----------TIKLGYAETNIG 39 usage_00397.pdb 1 --VNIGVVGHVDHGKTTLVQAITG--------IWTS-KHSEELKR-GMTIKLGYAETNIG 48 usage_00454.pdb 1 --VNIGVVGHVDHGKTTLVQAITG--------IWTS------------TIKLGYAETNIG 38 usage_00455.pdb 1 ----IGVVGHVDHGKTTLVQAITG--------IWT-SK-HSEELKRGMTIKLGYAETNIG 46 usage_00620.pdb 1 VNVNVGVLGHIDSGKTALARALSTTASRGITL------------------DLGFSCFSVP 42 iGVvGHvDhGKTtLvqAitg kLGyaetnig usage_00254.pdb 40 VCESCK---KPEAYVTEPSCKSCGSDDEPKFLRRISFID-APG 78 usage_00255.pdb 40 VCESCK---KPEAYVTEPSCKSCGSDDEPKFLRRISFID-APG 78 usage_00397.pdb 49 VCESCK---KPEAYVTEPSCKSCGSDDEPKFLRRISFI----- 83 usage_00454.pdb 39 VCESCK---KPEAYVTEPSCKSCGSDDEPKFLRRISFID-A-- 75 usage_00455.pdb 47 VCESCK---KPEAYVTEPSCKSCGSDDEPKFLRRISFID-A-- 83 usage_00620.pdb 43 LPARLRSSL-----------------P-GEPLLQVTLVDCPGH 67 vcesck d pkfLrrisfi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################