################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:45:14 2021 # Report_file: c_0360_4.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00025.pdb # 10: usage_00026.pdb # 11: usage_00027.pdb # 12: usage_00028.pdb # 13: usage_00029.pdb # 14: usage_00057.pdb # 15: usage_00058.pdb # 16: usage_00059.pdb # 17: usage_00060.pdb # 18: usage_00061.pdb # 19: usage_00062.pdb # 20: usage_00083.pdb # 21: usage_00084.pdb # 22: usage_00085.pdb # # Length: 144 # Identity: 113/144 ( 78.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/144 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/144 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00018.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00019.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00020.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00021.pdb 1 --GEVSRFFKTKHPDKFRIYNLC-----------NHVYRVMIDDHNVPTLVDLLKFIDDA 47 usage_00022.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00023.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00024.pdb 1 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 60 usage_00025.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00026.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00027.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00028.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00029.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00057.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00058.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00059.pdb 1 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 60 usage_00060.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00061.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00062.pdb 1 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 60 usage_00083.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00084.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 usage_00085.pdb 1 -IGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDA 59 GEVSRFFKTKHPDKFRIYNLC NHVYRVMIDDHNVPTLVDLLKFIDDA usage_00017.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00018.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00019.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00020.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00021.pdb 48 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 107 usage_00022.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00023.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00024.pdb 61 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 120 usage_00025.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00026.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00027.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVF 119 usage_00028.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 usage_00029.pdb 60 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 usage_00057.pdb 60 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----GDV 114 usage_00058.pdb 60 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 usage_00059.pdb 61 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----GDV 115 usage_00060.pdb 60 KVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 usage_00061.pdb 60 KVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-------V 112 usage_00062.pdb 61 KVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----GDV 115 usage_00083.pdb 60 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----GDV 114 usage_00084.pdb 60 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 usage_00085.pdb 60 KVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT-----DVF 114 KVWMTSDPDHVIAIH K GKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRT usage_00017.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00018.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00019.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00020.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00021.pdb 108 QGV-FTASQIRYVGYFEKIKK--- 127 usage_00022.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00023.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00024.pdb 121 QGV-ETASQIRYVGYFEKIKK--- 140 usage_00025.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00026.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00027.pdb 120 QGV-ETASQIRYVGYFEKIKK--- 139 usage_00028.pdb 115 QGV-ETASQIRYVGYFEKIKK--- 134 usage_00029.pdb 115 QGV-ETASQIRYVGYFEKIKK--- 134 usage_00057.pdb 115 FQGVETASQIRYVGYFEKIKK--- 135 usage_00058.pdb 115 QGV-ETASQIRYVGYFEKIKK--- 134 usage_00059.pdb 116 FQGVETASQIRYVGYFEKIKK--- 136 usage_00060.pdb 115 QGV-ETASQIRYVGYFEKIKKNYG 137 usage_00061.pdb 113 FQGVETASQIRYVGYFEKIKK--- 133 usage_00062.pdb 116 FQGVETASQIRYVGYFEKIKK--- 136 usage_00083.pdb 115 FQGVETASQIRYVGYFEKIKK--- 135 usage_00084.pdb 115 QGV-ETASQIRYVGYFEKIKK--- 134 usage_00085.pdb 115 QGV-ETASQIRYVGYFEKIKK--- 134 eTASQIRYVGYFEKIKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################