################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:01 2021 # Report_file: c_0055_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00288.pdb # 4: usage_00289.pdb # 5: usage_00290.pdb # # Length: 209 # Identity: 78/209 ( 37.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/209 ( 37.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/209 ( 1.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -EKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS 59 usage_00024.pdb 1 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS 60 usage_00288.pdb 1 -LESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT 59 usage_00289.pdb 1 -LESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT 59 usage_00290.pdb 1 -LESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT 59 V Q G N GTTGESPT E E V PV GAG usage_00023.pdb 60 NSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRS 119 usage_00024.pdb 61 NSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRS 120 usage_00288.pdb 60 NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRT 119 usage_00289.pdb 60 NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRT 119 usage_00290.pdb 60 NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRT 119 NST L K AEK GA VLVVTPYYN P Q GLY H I I YN P R usage_00023.pdb 120 VIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKCG---KDFVQLSGDDCTALGFN 176 usage_00024.pdb 121 VIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKCG---KDFVQLSGDDCTALGFN 177 usage_00288.pdb 120 GVNVLPETAARIAADLKNVVGIKEANPAAAQIDRTVSLTKQARSDFMVWSGNDDRTFYLL 179 usage_00289.pdb 120 GVNVLPETAARIAADLKNVVGIKEANPAAAQIDRTVSLTKQARSDFMVWSGNDDRTFYLL 179 usage_00290.pdb 120 GVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQARSDFMVWSGNDDRTFYLL 179 ET D KN G K A DF SG D usage_00023.pdb 177 AHGGVGCISVSSNVAPKLCAQLHAACLCS 205 usage_00024.pdb 178 AHGGVGCISVSSNVAPKLCAQLHAACLCS 206 usage_00288.pdb 180 CAGGDGVISVVSNVAPKQMVELCAEYFSG 208 usage_00289.pdb 180 CAGGDGVISVVSNVAPKQMVELCAEYFSG 208 usage_00290.pdb 180 CAGGDGVISVVSNVAPKQMVELCAEYFSG 208 GG G ISV SNVAPK L A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################