################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:05 2021 # Report_file: c_0863_97.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00189.pdb # 2: usage_00190.pdb # 3: usage_00301.pdb # 4: usage_00330.pdb # 5: usage_00362.pdb # 6: usage_00363.pdb # 7: usage_00530.pdb # 8: usage_00531.pdb # 9: usage_00548.pdb # 10: usage_00550.pdb # 11: usage_00559.pdb # 12: usage_00567.pdb # 13: usage_00568.pdb # 14: usage_00569.pdb # 15: usage_00572.pdb # 16: usage_00686.pdb # 17: usage_00802.pdb # 18: usage_00803.pdb # 19: usage_00837.pdb # 20: usage_01297.pdb # 21: usage_01361.pdb # # Length: 88 # Identity: 10/ 88 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 88 ( 26.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 88 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00189.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00190.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00301.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00330.pdb 1 FFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDA-PSPYSVKNPMELDERYHDPLLEP 59 usage_00362.pdb 1 LQGIIDHLDYLADLGITGIYLTPIFRAP--------SNHKYDTADYFEIDPHFG------ 46 usage_00363.pdb 1 LQGIIDHLDYLADLGITGIYLTPIFRAP--------SNHKYDTADYFEIDPHFG------ 46 usage_00530.pdb 1 LQGIIDHLDYLVDLGITGIYLTPIFRSP--------SNHKYDTADYFEVDPHFG------ 46 usage_00531.pdb 1 LQGIIDHLDYLVDLGITGIYLTPIFRSP--------SNHKYDTADYFEVDPHFG------ 46 usage_00548.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00550.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00559.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00567.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00568.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00569.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00572.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00686.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_00802.pdb 1 LAGIMKHIDHLEDLGVETIYLTPIFSST--------SYHRYDTIDYKSIDKYLG------ 46 usage_00803.pdb 1 LAGIMKHIDHLEDLGVETIYLTPIFSST--------SYHRYDTIDYKSIDKYLG------ 46 usage_00837.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_01297.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 usage_01361.pdb 1 LKGVIDRLPYLEELGVTALYFTPIFASP--------SHHKYDTADYLAIDPQFG------ 46 l g l LG Y tPif h Ydt dy D g usage_00189.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00190.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00301.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00330.pdb 60 FKVDEEFKAFVEACHILGIRVILDFIPR 87 usage_00362.pdb 47 --DKETLKTLVKRCHEKGIRVMLDAVFN 72 usage_00363.pdb 47 --DKETLKTLVKRCHEKGIRVMLDAVFN 72 usage_00530.pdb 47 --DKETLKTLIDRCHEKGIRVMLDAVFN 72 usage_00531.pdb 47 --DKETLKTLIDRCHEKGIRVMLDAVFN 72 usage_00548.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00550.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00559.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00567.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00568.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00569.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00572.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00686.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_00802.pdb 47 --TMEDFEKLVQVLHSRKIKIVLDITMH 72 usage_00803.pdb 47 --TMEDFEKLVQVLHSRKIKIVLDITMH 72 usage_00837.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_01297.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 usage_01361.pdb 47 --DLPTFRRLVDEAHRRGIKIILDAVFN 72 l H I LD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################