################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:14:44 2021 # Report_file: c_0466_16.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00049.pdb # 4: usage_00067.pdb # 5: usage_00082.pdb # 6: usage_00083.pdb # 7: usage_00089.pdb # 8: usage_00090.pdb # 9: usage_00098.pdb # 10: usage_00099.pdb # 11: usage_00112.pdb # 12: usage_00113.pdb # 13: usage_00114.pdb # 14: usage_00127.pdb # 15: usage_00132.pdb # 16: usage_00134.pdb # 17: usage_00136.pdb # 18: usage_00137.pdb # 19: usage_00142.pdb # # Length: 87 # Identity: 4/ 87 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 87 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 87 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 ---YLALGGNK-LHD---ISALKEL-T-NLTYLTLEPNQLQSLPN---GVFDKLTNLKEL 48 usage_00017.pdb 1 ----LALGGNK-LHD---ISALKEL-T-NLTYLTLEPNQLQSLPN---GVFDKLTNLKEL 47 usage_00049.pdb 1 ---HILNLESNGFDEI-PVEVFKDL-F-ELKIIDLGLNNLNTLPA---SVFNNQVSLKSL 51 usage_00067.pdb 1 ---NELRLQDNQLTSL-PPGVFDSL-T-KLTYLTLSQNQLQSIPA---GVFDKLTNLNRL 51 usage_00082.pdb 1 ---TYLNLSTNQLQSL-PNGVFDKL-T-QLKELALNTNQLQSLPD---GVFDKLTQLKDL 51 usage_00083.pdb 1 ---TQLYLGGNKLQSL-PNGVFNKL-T-SLTYLNLSTNQLQSLPN---GVFDKLTQLKEL 51 usage_00089.pdb 1 ---NELRLDFNKLKSL-PPRVFDRL-T-NLTALYLEYNQLQSIPK---GVFDKLVNLETL 51 usage_00090.pdb 1 ---HILNLESNGFDEI-PVEVFKDL-F-ELKIIDLGLNNLNTLPA---SVFNNQVSLKSL 51 usage_00098.pdb 1 ---TTLNLSNNQLTSL-PQGVFERL-T-NLTTLNLSNNQLTSLPQ---GVFERLTNLTTL 51 usage_00099.pdb 1 ---DQIIANNSDIKS---VQGIQYL-P-NVRYLALGGNKLHDI-----SALKELTNLGWL 47 usage_00112.pdb 1 ---TVLNLTHNQLRRL-PAANFTRY-S-QLTSLDVGFNTISKLEP---ELCQKLPMLKVL 51 usage_00113.pdb 1 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW-TNLTML 59 usage_00114.pdb 1 ---RYLALGGNKLHD---ISALKEL-T-NLTYLILTGNQLQSLPN---GVFDKLTNLKEL 49 usage_00127.pdb 1 ---RYLALGGNKLHD---ISALKEL-T-NLTYLILTGNQLQSLPN---GVFDKLTNLKEL 49 usage_00132.pdb 1 ---TWLHLDHNQLQSL-PNGVFDKL-T-KLTELILSSNQLQSLPN---GTFDKLTNLQNL 51 usage_00134.pdb 1 ---QTLHLRSNQLQSL-PNGVFDKL-T-SLTFLDLSTNQLQSLPN---GVFDKLTNLREL 51 usage_00136.pdb 1 ---LGLSLRHNQLQSL-PNGVFDKL-T-QLTWLHLDHNQLQSLPN---GVFDKLTKLTEL 51 usage_00137.pdb 1 ---QTLHLRSNQLQSL-PNGVFDKL-T-SLTFLDLSTNQLQSLPN---GVFDKLTNLREL 51 usage_00142.pdb 1 ---LSLNMSSNILTD--TIFRC-LP-P-RIKVLDLHSNKIKSIP----KQVVKLEALQEL 48 l n L L usage_00016.pdb 49 QLWANQLQSLPDGVFDKLTNLTYL-NL 74 usage_00017.pdb 48 QLWANQLQSLPDGVFDKLTNLTYL-NL 73 usage_00049.pdb 52 NLQKNLITSVEKKVFGPAFRNLTELDM 78 usage_00067.pdb 52 ELSTNQLQSVPHGAFDSLVNLETL-HL 77 usage_00082.pdb 52 RLYQNQLKSVPDGVFDRLTSLQYI-WL 77 usage_00083.pdb 52 ALNTNQLQSLPDGVFDKLTQLKDL-RL 77 usage_00089.pdb 52 WLRENKLQSVPDGAFDSLTKVEML-QL 77 usage_00090.pdb 52 NLQKNLITSVEKKVFGPAFRNLTELDM 78 usage_00098.pdb 52 NLSNNQLTSLPQGVFERLTSLTTL-NL 77 usage_00099.pdb 48 NLSNNQLETLPQGVFEKLTNLTTL-NL 73 usage_00112.pdb 52 NLQHNELSQLSDKTFAFCTNLTEL-HL 77 usage_00113.pdb 60 DLSYNNLNVVGNDSFAWLPQLEYF-FL 85 usage_00114.pdb 50 VLVENQLQSLPDGVFDKLTNLTYL-YL 75 usage_00127.pdb 50 VLVENQLQSLPDGVFDKLTNLTYL-NL 75 usage_00132.pdb 52 DLSFNQLQSLPNGVFDKLTNLQTL-HL 77 usage_00134.pdb 52 HLEHNQLQSLPNGVFDKLTSLTTL-FL 77 usage_00136.pdb 52 ILSSNQLQSLPNGTFDKLTNLQNL-DL 77 usage_00137.pdb 52 HLEHNQLQSLPNGVFDKLTSLTTL-FL 77 usage_00142.pdb 49 NVASNQLKSVPDGIFDRLTSLQKI-WL 74 l N F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################