################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:02 2021 # Report_file: c_1395_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00793.pdb # 2: usage_00794.pdb # 3: usage_00795.pdb # 4: usage_00796.pdb # # Length: 71 # Identity: 1/ 71 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 71 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 71 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00793.pdb 1 ---VESLVSQYFQTVTDYGKDLMEKVKSPEL-QAEA-KSYFEKSKEQLTPLIKKAGTELV 55 usage_00794.pdb 1 ----VESLVSQYFQTVTDYGKDLMEKVKSPE-LQ--AKSYFEKSKEQLTPLIKKAGTELV 53 usage_00795.pdb 1 VES-LVSQYFQTVTDYGKDLMEKVKSPELQAE-----AKSYFEKSKEQLTPLIKKAGTEL 54 usage_00796.pdb 1 ----LVSQYFQTVTDYGKDLMEKVKSPELQAE-----AKSYFEKSKEQLTPLIKKAGTEL 51 s q t k K usage_00793.pdb 56 NFLSYF----- 61 usage_00794.pdb 54 NFLSYFVELG- 63 usage_00795.pdb 55 VNFLSYFVELG 65 usage_00796.pdb 52 VNFLSYFV--- 59 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################