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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:49:10 2021
# Report_file: c_0637_3.html
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#====================================
# Aligned_structures: 8
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00006.pdb
#   4: usage_00007.pdb
#   5: usage_00008.pdb
#   6: usage_00019.pdb
#   7: usage_00052.pdb
#   8: usage_00053.pdb
#
# Length:        104
# Identity:       34/104 ( 32.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     77/104 ( 74.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/104 ( 19.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  -LYFQSMRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   59
usage_00005.pdb         1  NLYFQSMRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   60
usage_00006.pdb         1  NLYFQSMRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   60
usage_00007.pdb         1  -LYFQSMRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   59
usage_00008.pdb         1  -LYFQSMRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   59
usage_00019.pdb         1  ------------RVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVP   48
usage_00052.pdb         1  ------------DVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   48
usage_00053.pdb         1  --------SFSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR   52
                                       dVlgWreSFdlLL sknGVaaFhaFLktEFSEENleFWlACEeFkkir

usage_00004.pdb        60  --SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNL---   98
usage_00005.pdb        61  --SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNL---   99
usage_00006.pdb        61  --SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTA  102
usage_00007.pdb        60  --SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQ--   99
usage_00008.pdb        60  --SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMN----   97
usage_00019.pdb        49  AHDKKELSYRAREIFSKFLCSKATTPVNIDSQA--QLADDVLR-   89
usage_00052.pdb        49  --SATKLASRAHHIFDEYIRSEAPKEVNIDHETRELTKTNLQA-   89
usage_00053.pdb        53  --SATKLASRAHHIFDEYIRSEAPKEVNIDHETRELTKTNL---   91
                             satkLasRAh IF e i SeApkeVNIDhet  lt  n    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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