################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:50:42 2021 # Report_file: c_0143_5.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00023.pdb # 2: usage_00033.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00061.pdb # 6: usage_00085.pdb # 7: usage_00087.pdb # 8: usage_00090.pdb # 9: usage_00091.pdb # 10: usage_00106.pdb # 11: usage_00107.pdb # 12: usage_00133.pdb # 13: usage_00134.pdb # 14: usage_00135.pdb # 15: usage_00138.pdb # 16: usage_00166.pdb # 17: usage_00169.pdb # 18: usage_00170.pdb # 19: usage_00171.pdb # 20: usage_00189.pdb # 21: usage_00190.pdb # 22: usage_00204.pdb # 23: usage_00230.pdb # 24: usage_00245.pdb # 25: usage_00246.pdb # 26: usage_00256.pdb # 27: usage_00258.pdb # 28: usage_00259.pdb # 29: usage_00266.pdb # 30: usage_00269.pdb # 31: usage_00280.pdb # 32: usage_00281.pdb # 33: usage_00288.pdb # 34: usage_00296.pdb # 35: usage_00307.pdb # 36: usage_00317.pdb # 37: usage_00320.pdb # 38: usage_00321.pdb # 39: usage_00334.pdb # 40: usage_00342.pdb # 41: usage_00349.pdb # 42: usage_00350.pdb # # Length: 126 # Identity: 10/126 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/126 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/126 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -IQMTQSPSSVSASIGDRVTITCRASQG-ID------NWLGWYQQ-KPGKAPKLLIYD-- 49 usage_00033.pdb 1 -IQLTQSPSSLSASVGDRVTITCRASQG-IR------NDLGWYQQ-KPGKAPKLLIYA-- 49 usage_00040.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQS-IS------SYLNWYQQ-KPGKAPKLLIYA-- 50 usage_00041.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQS-IS------SYLNWYQQ-KPGKAPKLLIYA-- 49 usage_00061.pdb 1 DIVMTQSPDSLSVSLGERATINCRASKS-VDS--YGNSFMHWYQQ-KPGQPPKLLIYL-- 54 usage_00085.pdb 1 -IVLTQSPATLSLSPGERATLSCMTSTD-ID------DDMNWYQQ-KPGQAPRLLISE-- 49 usage_00087.pdb 1 --QMTQSPSSLAVSVGGRVTITCRASQG-IG------SDLHWYQQ-KRGRPPKILIHH-- 48 usage_00090.pdb 1 DIQMTQSPSSLSASVGDTVTITCQA-N--G--------YLNWYQQ-RRGKAPKLLIYD-- 46 usage_00091.pdb 1 --LMTQSPSSLSVSVGSSVTITCQASQN-IT------NYIVWYQQ-KPGQAPKLLIYY-- 48 usage_00106.pdb 1 --IQMTQSPSLSASVGDRVTITCRASQS-IS------SYLNWYQQ-KPGKVPKLLIYA-- 48 usage_00107.pdb 1 -DIQMTQSPSLSASVGDRVTITCRASQS-IS------SYLNWYQQ-KPGKVPKLLIYA-- 49 usage_00133.pdb 1 --QMTQSPSSLSASVGDRVTITCRTSQS-IS------SYLNWYQQ-KPGKAPKLLIYA-- 48 usage_00134.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQD-VS------TAVAWYQQ-KPGKAPKLLIYS-- 50 usage_00135.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQD-VS------TAVAWYQQ-KPGKAPKLLIYS-- 50 usage_00138.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQA-SY------SSVAWYQQ-KPGKAPKLLIYA-- 49 usage_00166.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQD-IA------AALNWYQQ-KPGKAPKLLIYA-- 49 usage_00169.pdb 1 --QMSQSPSSLSASVGDTVTITCRASQG-IS------NYLAWYQQ-KPGKAPKSLIYY-- 48 usage_00170.pdb 1 --QMSQSPSSLSASVGDTVTITCRASQG-IS------NYLAWYQQ-KPGKAPKSLIYY-- 48 usage_00171.pdb 1 --QMSQSPSSLSASVGDTVTITCRASQG-IS------NYLAWYQQ-KPGKAPKSLIYY-- 48 usage_00189.pdb 1 DIQMTQSPDSLAVSLGERATINCKSSQS-VFSSSTNKNYLAWYQQ-KPGQPPKVLIYW-- 56 usage_00190.pdb 1 DIQMTQSPDSLAVSLGERATINCKSSQS-VFSSSTNKNYLAWYQQ-KPGQPPKVLIYW-- 56 usage_00204.pdb 1 DIQMTQSPSTLSASVGDRVTITCRASQT-IS------SWLAWYQQ-KSGTAPKLLIYK-- 50 usage_00230.pdb 1 -IQLTQSPSSVSASVGDRITITCRASQD-IS------NWVAWYQQ-KPGKAPKLLIYS-- 49 usage_00245.pdb 1 DIQMTQSPGTLSLSPGERATLSCRASQS-VS------SYLAWYQQ-KPGQAPRLLIYD-- 50 usage_00246.pdb 1 DIQMTQSPGTLSLSPGERATLSCRASQS-VS------SYLAWYQQ-KPGQAPRLLIYD-- 50 usage_00256.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQD-VS------TAVAWYQQ-KPGKAPKLLIYS-- 48 usage_00258.pdb 1 NIVLTQSPASLAVSLGQRATISCRASKG-VDS--YGNSFMHWYQQ-RPGQPPKLLIYL-- 54 usage_00259.pdb 1 NIVLTQSPASLAVSLGQRATISCRASKG-VDS--YGNSFMHWYQQ-RPGQPPKLLIYL-- 54 usage_00266.pdb 1 DISMTQGTSSLSARLGDRVTISCRASQD-IS------NYLNWYQQ-KPDGTVSLLIYY-- 50 usage_00269.pdb 1 -IQMTQSPSSLSASVGDRVTITCKASQD-VS------TAVAWYQQ-KPGKAPKLLIYS-- 49 usage_00280.pdb 1 -IQMTQSPSTLSASVGDRVTITCSASSS-IS-------YMHWYQQ-KPGKAPKLLIYT-- 48 usage_00281.pdb 1 -IQMTQSPSTLSASVGDRVTITCSASSS-IS-------YMHWYQQ-KPGKAPKLLIYT-- 48 usage_00288.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQW-IG------PELKWYQQ-KPGKAPKLLIYH-- 49 usage_00296.pdb 1 -LDLTQTPSSVSAAVGGTVTINCQASQS-VS------NLLAWYQQ-KPGQPPKLLIYG-- 49 usage_00307.pdb 1 --QMTQSPSSLSASVGDKVTITCQT-S--A-------GYLNWYQQ-RRGRAPKLLMYD-- 45 usage_00317.pdb 1 -IQMTQSSSSFSVSLGDRVTITCKASED-IY------NRLAWYQQ-KPGNAPRLLISG-- 49 usage_00320.pdb 1 DIQMTQVPVSLSAFVGDRVSITCRASQD-IS------RWLAWYQQ-KPGRAPKLLIYA-- 50 usage_00321.pdb 1 DIQMTQVPVSLSAFVGDRVSITCRASQD-IS------RWLAWYQQ-KPGRAPKLLIYA-- 50 usage_00334.pdb 1 --QVRQSPQSLTVWEGETTILNCSYEDSTFD-------YFPWYRQFP-GKSPALLIAISL 50 usage_00342.pdb 1 -IQMTQSPSSLSASVGDRVTITVRASQS-IS------SYLNWYQQ-KPGEAPKLLIYS-- 49 usage_00349.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQD-IK------KYLNWYHQ-KPGKVPELLMHD-- 48 usage_00350.pdb 1 DIQMTQSPSSLSASVGDRVTITCQASQD-IK------KYLNWYHQ-KPGKVPELLMHD-- 50 G c WY Q g p L usage_00023.pdb 50 --ASNLDTGVPSRFSGSGSG--TYFTLTISSLQAEDFAVYFCQQAKAF-PPTFGGG-TKV 103 usage_00033.pdb 50 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQLNSY-PLTFGGG-TKV 103 usage_00040.pdb 51 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYST-PNTFGQG-TKV 104 usage_00041.pdb 50 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYST-PNTFGQG-TKV 103 usage_00061.pdb 55 --ASNLESGVPDRFSGSGSG--TDFTLTISSLQAEDVAVYYCQQNNED-PRTFGGG-TKV 108 usage_00085.pdb 50 --GNTLRPGVPARFSGSGSG--TDFTLTISSLEPEDFAVYYCLQSFNV-PLTFGQG-TKV 103 usage_00087.pdb 49 --ASAREEGVPSRFGGSGSH--TPFIFTINDLQLDDVATYYCQVI-----ESFGQG-TRL 98 usage_00090.pdb 47 --GSKLERGVPSRFSGRRWG--QEYNLTINNLQPEDIATYFCQVY-----EFVVPG-TRL 96 usage_00091.pdb 49 --TSTLESGIPSRFSGSGSG--RDYSFTISNLQPEDVATYYCLQYNSL-LTFGGGT-KLE 102 usage_00106.pdb 49 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYST-SHTFGQG-TKL 102 usage_00107.pdb 50 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYST-SHTFGQG-TKL 103 usage_00133.pdb 49 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYST-PRTFGQG-TKV 102 usage_00134.pdb 51 --ASFLYSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYTT-PPTFGQG-TKV 104 usage_00135.pdb 51 --ASFLYSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQSYTT-PPTFGQG-TKV 104 usage_00138.pdb 50 --ASYLYSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQSSASP-ATFGQGT-KVE 103 usage_00166.pdb 50 --SSYLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQDGYY-PATFGQG-TKV 103 usage_00169.pdb 49 --TSHLESGVPSRFSGSGSG--TDFSLTISSLQPEDFATYYCQQHNSY-PRTFGQG-TKV 102 usage_00170.pdb 49 --TSHLESGVPSRFSGSGSG--TDFSLTISSLQPEDFATYYCQQHNSY-PRTFGQG-TKV 102 usage_00171.pdb 49 --TSHLESGVPSRFSGSGSG--TDFSLTISSLQPEDFATYYCQQHNSY-PRTFGQG-TKV 102 usage_00189.pdb 57 --SSTRESGVPDRFSASGSG--TDFTLTISSLQAADVAVYYCHQYYTA-PWTFGQG-TKV 110 usage_00190.pdb 57 --SSTRESGVPDRFSASGSG--TDFTLTISSLQAADVAVYYCHQYYTA-PWTFGQG-TKV 110 usage_00204.pdb 51 --ASSIVSGVPSRFSGSGSG--TEFTLTITSLQPDDFATYYCQQYNSS-PETFGQG-TKV 104 usage_00230.pdb 50 --ASSLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQANTF-PWTFGQG-TKV 103 usage_00245.pdb 51 --ASNRATGIPARFSGSGSG--TEFTLTISSLQSEDFAVYYCQQYDKW-PLTFGGG-TKV 104 usage_00246.pdb 51 --ASNRATGIPARFSGSGSG--TEFTLTISSLQSEDFAVYYCQQYDKW-PLTFGGG-TKV 104 usage_00256.pdb 49 --ASFLYSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQHYTT-PPTFGCG-TKV 102 usage_00258.pdb 55 --ASHLESGVPARFSGSGSR--TDFTLTIDPVEADDAATYYCQQNNED-PFTFGSG-TKL 108 usage_00259.pdb 55 --ASHLESGVPARFSGSGSR--TDFTLTIDPVEADDAATYYCQQNNED-PFTFGSG-TKL 108 usage_00266.pdb 51 --GSRLHSGVPSRFSGSGSG--TDYSLTISTLEQEDIATYFCQQGNTL-PRTFGGG-TKL 104 usage_00269.pdb 50 --ASYRYTGVPSRFSGSGSG--TDFTLTISSLNPEDFATYYCQQHYST-PWTFGGG-TKV 103 usage_00280.pdb 49 --TSNLASGVPARFSGSGSG--TEFTLTISSLQPDDFATYYCHQRSTY-PLTFGQG-TKV 102 usage_00281.pdb 49 --TSNLASGVPARFSGSGSG--TEFTLTISSLQPDDFATYYCHQRSTY-PLTFGQG-TKV 102 usage_00288.pdb 50 --GSILQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQYMYY-PHTFGQG-TKV 103 usage_00296.pdb 50 --ASNLESGVPSRFRGSGSG--TEFTLTISGMKAEDAATYYCQSGYYS-AGATFGAGTNV 104 usage_00307.pdb 46 --GSRLVTGVPSRFSGRRWG--TQYNLTIGSLQPEDIATYYCQVY-----EFFGPG-TRL 95 usage_00317.pdb 50 --ATSLETGVPSRFSGSGSG--KDYTLSITSLQTEDVATYYCQQYWST-PTFGGGT-KLE 103 usage_00320.pdb 51 --ASSLQGGVPSRFRGSGSG--TEFTLTISGLQPEDFATYYCQQGSTF-PYTSVLG-TIL 104 usage_00321.pdb 51 --ASSLQGGVPSRFRGSGSG--TEFTLTISGLQPEDFATYYCQQGSTF-PYTSVLG-TIL 104 usage_00334.pdb 51 VSNKKED----GRFTIFFNKREKKLSLHITDSQPGDSATYFCAATGSFNKLTFGAG-TRL 105 usage_00342.pdb 50 --ASVLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYAQQSVMI-PMTFGQG-TKV 103 usage_00349.pdb 49 --ASNLETGVPSRFSGRGSG--TDFTLTISSLQPEDIGTYYCQQYDNL-PPLTFGGGTKV 103 usage_00350.pdb 51 --ASNLETGVPSRFSGRGSG--TDFTLTISSLQPEDIGTYYCQQYDNL-PPLTFGG-GTK 104 RF I D Y c usage_00023.pdb 104 DI---- 105 usage_00033.pdb 104 EI---- 105 usage_00040.pdb 105 EI---- 106 usage_00041.pdb 104 EI---- 105 usage_00061.pdb 109 EI---- 110 usage_00085.pdb 104 EI---- 105 usage_00087.pdb 99 DI---- 100 usage_00090.pdb 97 DL---- 98 usage_00091.pdb 103 IK--RA 106 usage_00106.pdb 103 EI---- 104 usage_00107.pdb 104 EI---- 105 usage_00133.pdb 103 EI---- 104 usage_00134.pdb 105 EI---- 106 usage_00135.pdb 105 EI---- 106 usage_00138.pdb 104 I----- 104 usage_00166.pdb 104 EI---- 105 usage_00169.pdb 103 EI---- 104 usage_00170.pdb 103 EI---- 104 usage_00171.pdb 103 EI---- 104 usage_00189.pdb 111 EI---- 112 usage_00190.pdb 111 EI---- 112 usage_00204.pdb 105 EI---- 106 usage_00230.pdb 104 EI---- 105 usage_00245.pdb 105 EI---- 106 usage_00246.pdb 105 EI---- 106 usage_00256.pdb 103 EI---- 104 usage_00258.pdb 109 EI-KRA 113 usage_00259.pdb 109 EI-KRA 113 usage_00266.pdb 105 EI---- 106 usage_00269.pdb 104 EI---- 105 usage_00280.pdb 103 EV---- 104 usage_00281.pdb 103 EV---- 104 usage_00288.pdb 104 EI---- 105 usage_00296.pdb 105 EI-KRT 109 usage_00307.pdb 96 DL---- 97 usage_00317.pdb 104 I----- 104 usage_00320.pdb 105 GI---- 106 usage_00321.pdb 105 GI---- 106 usage_00334.pdb 106 AV---- 107 usage_00342.pdb 104 E----- 104 usage_00349.pdb 104 EI-KRT 108 usage_00350.pdb 105 VEI--- 107 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################