################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:50 2021 # Report_file: c_1490_54.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00079.pdb # 2: usage_00508.pdb # 3: usage_00614.pdb # 4: usage_00615.pdb # 5: usage_00616.pdb # 6: usage_00755.pdb # 7: usage_01018.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 41 ( 78.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 --PQGLAQLRALFDSFWID--ELD---RLVADA-------- 26 usage_00508.pdb 1 NK-------------AAK-VLGKDEI--TDYDNAQL----- 20 usage_00614.pdb 1 --SPNAIAEHAAIQAARI-LRQDK---AMDEKVARH----- 30 usage_00615.pdb 1 --SPNAIAEHAAIQAARI-LRQDK---AMDEKVARH----- 30 usage_00616.pdb 1 --SPNAIAEHAAIQAARI-LRQDK---AMDEKVARH----- 30 usage_00755.pdb 1 --SPNAIAELAVTQAMML-LRHTA---YTTSRTAKK----- 30 usage_01018.pdb 1 ---------SMEEAAEIQ-AND----FQHATRDLYDRIEKG 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################