################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:51 2021 # Report_file: c_0877_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00098.pdb # 4: usage_00130.pdb # 5: usage_00177.pdb # 6: usage_00178.pdb # # Length: 92 # Identity: 80/ 92 ( 87.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/ 92 ( 87.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 92 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 SPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIG-------AIFELLDYIVNEPPPKLP 52 usage_00028.pdb 1 SPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIGS-----MAIFELLDYIVNEPPPKLP 54 usage_00098.pdb 1 SPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIP-PPDAPMAIFELLDYIVNEPPPKLP 58 usage_00130.pdb 1 SPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIP-PP--PMAIFELLDYIVNEPPPKLP 56 usage_00177.pdb 1 SPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPRP-----PMAIFELLDYIVNEPPPKLP 54 usage_00178.pdb 1 SPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPRP-----PMAIFELLDYIVNEPPPKLP 54 SPERLQGT YSVQSDIWSMGLSLVEMAVGRYP AIFELLDYIVNEPPPKLP usage_00027.pdb 53 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 84 usage_00028.pdb 55 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 86 usage_00098.pdb 59 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 90 usage_00130.pdb 57 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 88 usage_00177.pdb 55 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 86 usage_00178.pdb 55 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 86 S VFSLEFQDFVNKCLIKNPAERADLKQLMVH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################