################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:15 2021 # Report_file: c_1386_153.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00323.pdb # 2: usage_00343.pdb # 3: usage_00344.pdb # 4: usage_00807.pdb # 5: usage_00810.pdb # 6: usage_00875.pdb # # Length: 114 # Identity: 17/114 ( 14.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/114 ( 28.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/114 ( 36.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00323.pdb 1 SLKELDYMHLKKTGELIKASIMSGAVLAE--ASEGDIKKLEGFGYKLGLAFQIKDDILDV 58 usage_00343.pdb 1 -LDALERIHRHKTGALIRAAVRLGALSAGDKG-RRALPVLDKYAESIGLAFQVQDDILDV 58 usage_00344.pdb 1 -LDALERIHRHKTGALIRAAVRLGALSAGDKG-RRALPVLDKYAESIGLAFQVQDDILDV 58 usage_00807.pdb 1 GLDHLEFIHHHKTAALLQGSVVLGAILGG--GKEEEVAKLRKFANCIGLLFQVVDDILDV 58 usage_00810.pdb 1 -------------AALLQGSVVLGAILGG--GKEEEVAKLRKFANCIGLLFQVVDDILDV 45 usage_00875.pdb 1 -LEHLEFIHLHKTAALLEAAAVLGVIMGG--GTEEEIEKLRKYARCIGLLFQVVDDILDV 57 aL lGa g g L k a iGL FQv DDILDV usage_00323.pdb 59 VG------------------NNYITIFGLEECKKKCVNITEECIEILSSI---- 90 usage_00343.pdb 59 VGD-TATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQS 111 usage_00344.pdb 59 VGD-TATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQS 111 usage_00807.pdb 59 TKS-SKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFH--- 108 usage_00810.pdb 46 TKS-SKELGK-----------TYPKLIGVEKSKEFADRLNREAQEQLL------ 81 usage_00875.pdb 58 TKSTE-----E---------LTYPRLIGLERSKEVAEKLRREAEEQLL------ 91 tYp l G E a l a L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################