################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:33 2021 # Report_file: c_1125_29.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00112.pdb # 4: usage_00113.pdb # 5: usage_00459.pdb # 6: usage_00478.pdb # 7: usage_00479.pdb # 8: usage_00480.pdb # 9: usage_00481.pdb # 10: usage_00482.pdb # 11: usage_00646.pdb # 12: usage_00667.pdb # 13: usage_00672.pdb # # Length: 67 # Identity: 42/ 67 ( 62.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 67 ( 76.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 67 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 NEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFLKAHWKFLKTVVNK 60 usage_00063.pdb 1 NEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFLKAHWKFLKTVVNK 60 usage_00112.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00113.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00459.pdb 1 --------LVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 52 usage_00478.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00479.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00480.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00481.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00482.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 usage_00646.pdb 1 SEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILK 60 usage_00667.pdb 1 --------LVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 52 usage_00672.pdb 1 HEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNK 60 lVTVIKDLLgL e KRGKDNKA ASnIMYiVGQYPRFL AHWkFLkTVvnK usage_00062.pdb 61 LFEFMHE 67 usage_00063.pdb 61 LFEFM-- 65 usage_00112.pdb 61 LFEFM-- 65 usage_00113.pdb 61 LFEFM-- 65 usage_00459.pdb 53 LFEFM-- 57 usage_00478.pdb 61 LFEFM-- 65 usage_00479.pdb 61 LFEFM-- 65 usage_00480.pdb 61 LFEFM-- 65 usage_00481.pdb 61 LFEFM-- 65 usage_00482.pdb 61 LFEF--- 64 usage_00646.pdb 61 LFEFMHE 67 usage_00667.pdb 53 LFEFM-- 57 usage_00672.pdb 61 LFEFM-- 65 LFEF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################