################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:44 2021 # Report_file: c_1487_176.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00185.pdb # 2: usage_00307.pdb # 3: usage_00309.pdb # 4: usage_00460.pdb # 5: usage_00625.pdb # 6: usage_01797.pdb # 7: usage_03182.pdb # 8: usage_03741.pdb # 9: usage_04138.pdb # 10: usage_04139.pdb # 11: usage_04349.pdb # 12: usage_04350.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 61 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 61 ( 78.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00185.pdb 1 -E-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--- 29 usage_00307.pdb 1 ME-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--K 31 usage_00309.pdb 1 ME-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--- 30 usage_00460.pdb 1 --------------NPGEADR-----TREAYGAAKFERLQGVKAKY-------------- 27 usage_00625.pdb 1 FI-----------K-----EAKEKMK------RTLEKIEDELRKMRTGKPSPAILEE--I 36 usage_01797.pdb 1 --------------------NQESIA------KLMEIFYEKVRKDKDL-----GPIFNNA 29 usage_03182.pdb 1 --DTQHRSQELPCN-----ADFWLAV------QQELLPQVRAVT---------------- 31 usage_03741.pdb 1 -V-----------S-----PNRQELL------RYLSTNLTRDCLNNLK-----MENN--P 30 usage_04138.pdb 1 ME-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--K 31 usage_04139.pdb 1 ME-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--- 30 usage_04349.pdb 1 -E-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--- 29 usage_04350.pdb 1 -E-----------K-----EGDELIK------NTEARISKELEKHPEI-----KGKI--- 29 usage_00185.pdb - usage_00307.pdb - usage_00309.pdb - usage_00460.pdb - usage_00625.pdb - usage_01797.pdb 30 I 30 usage_03182.pdb - usage_03741.pdb - usage_04138.pdb - usage_04139.pdb - usage_04349.pdb - usage_04350.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################