################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:12 2021 # Report_file: c_0175_67.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00003.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00198.pdb # # Length: 134 # Identity: 18/134 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/134 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/134 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 LDKIRYGISTAQI-----------VPRFVAGLRESAQAEVRGIASRRLENAQKA-KELAI 48 usage_00076.pdb 1 ----RIGVGCADI-----------ARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY 45 usage_00077.pdb 1 ----RIGVGCADI-----------ARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY 45 usage_00198.pdb 1 -------------RWGLIGASTIAREWVIGAIRATG-GEVVSMMSTSAERGAAYATENGI 46 v ai a g aSrslE a a t n usage_00003.pdb 49 ---PVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEE 105 usage_00076.pdb 46 PESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVA-NVTEFDK 104 usage_00077.pdb 46 PESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVA-NVTEFDK 104 usage_00198.pdb 47 ---GKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDARE 103 k gSyE L Dp iDa Yvp lH e a A GKh LlEKP a n e usage_00003.pdb 106 LFAIAQEQGVFLE- 118 usage_00076.pdb 105 IVDACEANGVQID- 117 usage_00077.pdb 105 IVDACEANGVQID- 117 usage_00198.pdb 104 MVVAAREAGVVLGT 117 v a GV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################