################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:20 2021 # Report_file: c_1101_47.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00059.pdb # 2: usage_00061.pdb # 3: usage_00158.pdb # # Length: 144 # Identity: 104/144 ( 72.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 119/144 ( 82.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/144 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 DIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDS 60 usage_00061.pdb 1 -IIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDS 59 usage_00158.pdb 1 DIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDS 60 IIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVIsAAKKIAEAGSRMDKLgRtiADhCPDS usage_00059.pdb 61 ACKQDLLAYLQRIALYCHQLNICSK----VKAEVQNL-GGELVV-SGVDSAMSLIQAAKN 114 usage_00061.pdb 60 ACKQDLLAYLQRIALYCHQLNICSK----VKAEVQNL-GGELVV-SGVDSAMSLIQAAKN 113 usage_00158.pdb 61 ACKQDLLAYLQRIALYCHQLNICSKVKAE-----VQNL-GGELIVSGLDSATSLIQAAKN 114 ACKQDLLAYLQRIALYCHQLNICSK qnl Gelvv SGvDSAmSLIQAAKN usage_00059.pdb 115 LMNAVVQTVKAS------------ 126 usage_00061.pdb 114 LMNAVVQTVKASYVAST------- 130 usage_00158.pdb 115 LMNAVVLTVKASYVASTKYQKVYG 138 LMNAVVqTVKAS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################