################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:48 2021 # Report_file: c_0146_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00042.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00078.pdb # 9: usage_00105.pdb # 10: usage_00106.pdb # 11: usage_00108.pdb # 12: usage_00234.pdb # # Length: 128 # Identity: 14/128 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/128 ( 56.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/128 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD 51 usage_00044.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD 52 usage_00045.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD 52 usage_00050.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 52 usage_00051.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 52 usage_00052.pdb 1 ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 51 usage_00053.pdb 1 AQSVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 54 usage_00078.pdb 1 -QSVTQLGSHVSVSEGALVLLRCNYSSS------VPPYLFWYVQYPNQGLQLLLKYTSAA 53 usage_00105.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 52 usage_00106.pdb 1 ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 51 usage_00108.pdb 1 ---GVTQPKHLSASMGGSVEIPFSFYYPWELAIVPNVRISWRRGHFH--GQSFYSTR--- 52 usage_00234.pdb 1 --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD 52 vtq v vSeGas lrc ysys pylfWyvqyp Q llky usage_00042.pdb 52 PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK 103 usage_00044.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK 104 usage_00045.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK 104 usage_00050.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 104 usage_00051.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 104 usage_00052.pdb 52 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 103 usage_00053.pdb 55 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 106 usage_00078.pdb 54 TLVKGIN---GFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSES---PFGNEKLT-FGT 106 usage_00105.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 104 usage_00106.pdb 52 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 103 usage_00108.pdb 53 PPSIHKDYVNRLFLNWTEGQESGFLRISNLRKEDQSVYFCRVELDTRRS--GRQQLQSIK 110 usage_00234.pdb 53 PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK 104 p v g n gfeaef ks SfhLrk s h sD avYFCaVs g kl fgk usage_00042.pdb 104 GAKLTVSP 111 usage_00044.pdb 105 GAKLTVS- 111 usage_00045.pdb 105 GAKLTVS- 111 usage_00050.pdb 105 GAKLTVSP 112 usage_00051.pdb 105 GAKLTVSP 112 usage_00052.pdb 104 GAKLTVSP 111 usage_00053.pdb 107 GAKLTVSP 114 usage_00078.pdb 107 GTRLTIIP 114 usage_00105.pdb 105 GAKLTVSP 112 usage_00106.pdb 104 GAKLTVSP 111 usage_00108.pdb 111 GTKLTIT- 117 usage_00234.pdb 105 GAKLTVSP 112 G kLT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################