################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:20 2021 # Report_file: c_0618_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00011.pdb # 4: usage_00092.pdb # 5: usage_00186.pdb # 6: usage_00238.pdb # # Length: 88 # Identity: 26/ 88 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 88 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 88 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 MKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVP 60 usage_00009.pdb 1 ---EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVP 57 usage_00011.pdb 1 MKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVP 60 usage_00092.pdb 1 MKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVP 60 usage_00186.pdb 1 ------TEDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVS 54 usage_00238.pdb 1 --------------NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVP 46 nieedRklliqAaIVRIMKmrkvLkHqqLlgEvltQlssRFkprVp usage_00008.pdb 61 VIKKCIDILIEKEYLERVDGEKDTYSY- 87 usage_00009.pdb 58 VIKKCIDILIEKEYLERVDGEKDTYSY- 84 usage_00011.pdb 61 VIKKCIDILIEKEYLERVDGEKDTYSY- 87 usage_00092.pdb 61 VIKKCIDILIEKEYLERVDGEKDTYSY- 87 usage_00186.pdb 55 MVKRAIDSLIQKGYLQRGDDGESYAYLA 82 usage_00238.pdb 47 VIKKCIDILIEKEYLERVDGEKDTYSY- 73 viKkcIDiLIeKeYLeRvDgekdtysy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################