################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:23 2021 # Report_file: c_0194_96.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00011.pdb # 2: usage_00029.pdb # 3: usage_00329.pdb # 4: usage_00330.pdb # 5: usage_00400.pdb # 6: usage_00500.pdb # 7: usage_00572.pdb # 8: usage_00573.pdb # # Length: 161 # Identity: 41/161 ( 25.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/161 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/161 ( 9.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAE 60 usage_00029.pdb 1 SRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKE 60 usage_00329.pdb 1 -EAEVRRLIEAICRSGAIDLVDYELAY-GERIADVRRMTEECSVWLVVSRHYFDGTPRKE 58 usage_00330.pdb 1 NEAEVRRLIEAICRSGAIDLVDYELAY-GERIADVRRMTEECSVWLVVSRHYFDGTPRKE 59 usage_00400.pdb 1 SEENYFALYHELVKKGALDLLDIELFANPLAADTLIHEAKKAGIKIVLCNHDFQKTPSQE 60 usage_00500.pdb 1 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAE 60 usage_00572.pdb 1 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAE 60 usage_00573.pdb 1 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAE 60 L G D D EL v s H F TP E usage_00011.pdb 61 EIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVIS 120 usage_00029.pdb 61 EIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVIS 120 usage_00329.pdb 59 TLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRE-LAIPLITMAMGGLGAIT 117 usage_00330.pdb 60 TLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRE-LAIPLITMAMGGLGAIT 118 usage_00400.pdb 61 EIVARLRQMQMRQADICKIAVMPQDATDVLTLLSATNEMYTHYASVPIVTMSMGQLGMIS 120 usage_00500.pdb 61 EIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVIS 120 usage_00572.pdb 61 EIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVIS 120 usage_00573.pdb 61 EIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVIS 120 r gADi K AVMP DVL LL AT E P iTM M G I usage_00011.pdb 121 RLAGEVFGSAATFGAVK----PGQISVADLRTVLTILHQ-- 155 usage_00029.pdb 121 RLCGEIFGSALTFGAAK--SAPGQISFKELNSVLNLLHKSI 159 usage_00329.pdb 118 RLAGWLFGSAVTFAVGNQSSAPGQIPIDDVRTVLSILQTY- 157 usage_00330.pdb 119 RLAGWLFGSAVTFAVGNQSSAPGQIPIDDVRTVLSILQTY- 158 usage_00400.pdb 121 RVTGQLFGSALTFGS---------LSVQVLRNYLKTF---- 148 usage_00500.pdb 121 RLAGEVFGSAATFGAVG------AISVADLRTVLTILHQA- 154 usage_00572.pdb 121 RLAGEVFGSAATFGAV--------ISVADLRTVLTILHQ-- 151 usage_00573.pdb 121 RLAGEVFGSAATFGAVK------QISVADLRTVLTILH--- 152 Rl G FGSA TF i r vL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################