################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:45 2021 # Report_file: c_0721_22.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00086.pdb # 2: usage_00087.pdb # 3: usage_00088.pdb # 4: usage_00089.pdb # 5: usage_00090.pdb # 6: usage_00429.pdb # 7: usage_00557.pdb # 8: usage_00558.pdb # 9: usage_00559.pdb # 10: usage_00560.pdb # 11: usage_00561.pdb # 12: usage_00562.pdb # 13: usage_00563.pdb # 14: usage_00564.pdb # 15: usage_00565.pdb # 16: usage_00566.pdb # 17: usage_00567.pdb # # Length: 79 # Identity: 16/ 79 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 79 ( 59.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 79 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 KRILIVDVPIELDNGTVAHFEGYRVQHNVSRGPGKGGVRYHQDV----TLSEVMALSAWM 56 usage_00087.pdb 1 KRILIVDVPIELDNGTVAHFEGYRVQHNVSRGPGKGGVRYHQDV----TLSEVMALSAWM 56 usage_00088.pdb 1 KRILIVDVPIELDNGTVAHFEGYRVQHNVSRGPGKGGVRYHQDV----TLSEVMALSAWM 56 usage_00089.pdb 1 KRILIVDVPIELDNGTVAHFEGYRVQHNVSRGPGKGGVRYHQDV----TLSEVMALSAWM 56 usage_00090.pdb 1 KRILIVDVPIELDNGTVAHFEGYRVQHNVSRGPGKGGVRYHQDV----TLSEVMALSAWM 56 usage_00429.pdb 1 --VLFCHS-P--------EIKAIIAIHDTTLGPAMGATRILPYINEEAALKDALRLSRGM 49 usage_00557.pdb 1 -RVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 55 usage_00558.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00559.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00560.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00561.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00562.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00563.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00564.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00565.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 usage_00566.pdb 1 -RVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 55 usage_00567.pdb 1 KRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEV----TLSEVMALAGWM 56 Livdv fegyrv Hn rGP kGgvRyh v tLsevmaL wM usage_00086.pdb 57 SVKNAAVNVPYGGAKGGI- 74 usage_00087.pdb 57 SVKNAAVNVPYGGAKGGI- 74 usage_00088.pdb 57 SVKNAAVNVPYGGAKGGI- 74 usage_00089.pdb 57 SVKNAAVNVPYGGAKGGI- 74 usage_00090.pdb 57 SVKNAAVNVPYGGAKGGI- 74 usage_00429.pdb 50 TYKAACANIPAGGGKAVII 68 usage_00557.pdb 56 TIKNAAVGLPYGGGKGGI- 73 usage_00558.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00559.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00560.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00561.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00562.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00563.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00564.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00565.pdb 57 TIKNAAVGLPYGGGKGGI- 74 usage_00566.pdb 56 TIKNAAVGLPYGGGKGGI- 73 usage_00567.pdb 57 TIKNAAVGLPYGGGKGGI- 74 KnAav PyGG KggI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################