################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:45:40 2021 # Report_file: c_0119_3.html ################################################################################################ #==================================== # Aligned_structures: 55 # 1: usage_00019.pdb # 2: usage_00022.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00034.pdb # 6: usage_00035.pdb # 7: usage_00036.pdb # 8: usage_00053.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00064.pdb # 12: usage_00079.pdb # 13: usage_00080.pdb # 14: usage_00090.pdb # 15: usage_00093.pdb # 16: usage_00094.pdb # 17: usage_00100.pdb # 18: usage_00103.pdb # 19: usage_00105.pdb # 20: usage_00107.pdb # 21: usage_00110.pdb # 22: usage_00113.pdb # 23: usage_00114.pdb # 24: usage_00115.pdb # 25: usage_00119.pdb # 26: usage_00122.pdb # 27: usage_00127.pdb # 28: usage_00128.pdb # 29: usage_00129.pdb # 30: usage_00130.pdb # 31: usage_00138.pdb # 32: usage_00142.pdb # 33: usage_00143.pdb # 34: usage_00144.pdb # 35: usage_00145.pdb # 36: usage_00157.pdb # 37: usage_00166.pdb # 38: usage_00180.pdb # 39: usage_00182.pdb # 40: usage_00183.pdb # 41: usage_00184.pdb # 42: usage_00201.pdb # 43: usage_00202.pdb # 44: usage_00212.pdb # 45: usage_00215.pdb # 46: usage_00233.pdb # 47: usage_00240.pdb # 48: usage_00245.pdb # 49: usage_00246.pdb # 50: usage_00267.pdb # 51: usage_00281.pdb # 52: usage_00282.pdb # 53: usage_00283.pdb # 54: usage_00284.pdb # 55: usage_00293.pdb # # Length: 109 # Identity: 42/109 ( 38.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/109 ( 43.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/109 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -IVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 59 usage_00022.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00030.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00031.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00034.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00035.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00036.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00053.pdb 1 --VMTQTPATLSVTPGDSVSLSCRASQSVSNKLHWYQQKSHESPRLLIKFASQSIPGIPS 58 usage_00054.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00055.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYTSQSMSGIPS 59 usage_00064.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00079.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00080.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00090.pdb 1 DIVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 60 usage_00093.pdb 1 DIVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 60 usage_00094.pdb 1 -IVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 59 usage_00100.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00103.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00105.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00107.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00110.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00113.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00114.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00115.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00119.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00122.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00127.pdb 1 -IVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 59 usage_00128.pdb 1 -IELTQSPATLSVTPGNSVSISCRASQSIGNRLFWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00129.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00130.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00138.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00142.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00143.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00144.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00145.pdb 1 EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPS 60 usage_00157.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00166.pdb 1 -IVLTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASHSISGIPS 59 usage_00180.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00182.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00183.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00184.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00201.pdb 1 -IVLTQSPDFQSVTPKEKVTITCRASQSISDHLHWYQQKPDQSPKLLIKYASHAISGVPS 59 usage_00202.pdb 1 -IVLTQSPDFQSVTPKEKVTITCRASQSISDHLHWYQQKPDQSPKLLIKYASHAISGVPS 59 usage_00212.pdb 1 DIVMTQSPATLSVTPGDRVSLSCRASQSIGDYLHWYQQKSHESPRLLINYASQSISGIPS 60 usage_00215.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00233.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00240.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQFVGSSIHWYQQRTNGSPRLLIKYASESMSGIPS 59 usage_00245.pdb 1 -IFLTQSPANMSVSPGERVSFSCRASQNIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00246.pdb 1 -IFLTQSPANMSVSPGERVSFSCRASQNIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00267.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00281.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00282.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLH-YQQKSHESPRLLIKYASQSISGIPS 58 usage_00283.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLH-YQQKSHESPRLLIKYASQSISGIPS 58 usage_00284.pdb 1 --ELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYVSQSSSGIPS 58 usage_00293.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 TQsP SV P V CRASQ h YQQ SP L Iky S sG PS usage_00019.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 105 usage_00022.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00030.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00031.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00034.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00035.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00036.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00053.pdb 59 RFSGSGSGSDFTLSINSVETEDFGIYFCHQTHGRPLTFGAGTKLELKRA 107 usage_00054.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 109 usage_00055.pdb 60 RFSGSGSGTDFTLSINSVETEDFGVYFCQQSGSWPRTFGGGTKLDI--- 105 usage_00064.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00079.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00080.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00090.pdb 61 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 106 usage_00093.pdb 61 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 106 usage_00094.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 105 usage_00100.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00103.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 106 usage_00105.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00107.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 109 usage_00110.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 109 usage_00113.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00114.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 109 usage_00115.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00119.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00122.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00127.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 105 usage_00128.pdb 60 RFSGSGSGTDFTLSINSVETEDLAVYFCQQVSEWPFTFGGGTKLEI--- 105 usage_00129.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00130.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00138.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00142.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00143.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00144.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00145.pdb 61 RFSGSGSGTDFTLTINSLEAEDAAAYYCHQSSSLPFTFGPGTKVDI--- 106 usage_00157.pdb 60 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEI--- 105 usage_00166.pdb 60 RFSGSGSGSDFTLSINSVEPEDVGIYYCQHGHSFPWTFGGGTKLEIKRT 108 usage_00180.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 106 usage_00182.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00183.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00184.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00201.pdb 60 RFSGSGSGTDFTLTINSLEAEDAATYYCQQGHSFPLTFGGGTKVEI--- 105 usage_00202.pdb 60 RFSGSGSGTDFTLTINSLEAEDAATYYCQQGYDFPLTFGGGTKVEI--- 105 usage_00212.pdb 61 RFSGSGSGSDFTLIINSVEPEDVGVYYCQNGHSFPYTFGGGTKLEIRRA 109 usage_00215.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00233.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00240.pdb 60 RFSGSGSGTDFTLSINTVESEDIADYYCQQSHSWPFTFGSGTNLEVKRT 108 usage_00245.pdb 60 RFSGSGSGTDFILSINTVESEDIAVYFCQQSNRWPFTFGSGTKLEVIRA 108 usage_00246.pdb 60 RFSGSGSGTDFILSINTVESEDIAVYFCQQSNRWPFTFGSGTKLEVIRA 108 usage_00267.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00281.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00282.pdb 59 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSPYTFGGGTKLEI---- 103 usage_00283.pdb 59 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSPYTFGGGTKLEI---- 103 usage_00284.pdb 59 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPRTFGGGTKLEI--- 104 usage_00293.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 RFSGSGSG DF L IN E ED Y C G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################