################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:02 2021 # Report_file: c_1407_34.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00257.pdb # 4: usage_00258.pdb # 5: usage_00259.pdb # 6: usage_00260.pdb # 7: usage_00261.pdb # 8: usage_00262.pdb # 9: usage_00455.pdb # 10: usage_00710.pdb # # Length: 68 # Identity: 4/ 68 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 68 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 68 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 PDRVVKYYLRPRIMRMEMALEAFLTG-------DIRIIKELLYRDPRTKSDEQVEKVIEE 53 usage_00086.pdb 1 PDRVVKYYLRPRIMRMEMALEAFLTG-------DIRIIKELLYRDPRTKSDEQVEKVIEE 53 usage_00257.pdb 1 --------LWPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 45 usage_00258.pdb 1 --------LWPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 45 usage_00259.pdb 1 --------LWPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 45 usage_00260.pdb 1 ---------WPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 44 usage_00261.pdb 1 --------LWPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 45 usage_00262.pdb 1 -----IFYLWPRILRTEWNLEAFISR-------DRKVLEEILIRDPRTKSYEQVVKVLDE 48 usage_00455.pdb 1 ---------WPRI-LREWNLEAYISR-------DRKVLEEILIRDPRTKSYEQIVQVLDE 43 usage_00710.pdb 1 -----------------VVDELLTYWNLDESESILDELEEVLLVS--DFGPKTALKIVDT 41 lEa d E L rd tks eq kv e usage_00085.pdb 54 ILA----- 56 usage_00086.pdb 54 ILA----- 56 usage_00257.pdb 46 ILSL---- 49 usage_00258.pdb 46 ILSL---- 49 usage_00259.pdb 46 ILSL---- 49 usage_00260.pdb 45 ILSL---- 48 usage_00261.pdb 46 ILSL---- 49 usage_00262.pdb 49 ILSL---- 52 usage_00455.pdb 44 IFN----- 46 usage_00710.pdb 42 IRKDILAG 49 I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################