################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:10 2021 # Report_file: c_1480_6.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00048.pdb # 2: usage_00361.pdb # 3: usage_00998.pdb # 4: usage_01908.pdb # 5: usage_01988.pdb # 6: usage_02072.pdb # 7: usage_02278.pdb # 8: usage_02286.pdb # 9: usage_02296.pdb # 10: usage_02347.pdb # 11: usage_02396.pdb # 12: usage_03189.pdb # 13: usage_03190.pdb # 14: usage_03521.pdb # 15: usage_03638.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 61 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 61 ( 44.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 ----IFLNVLEAIE------PGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKA 50 usage_00361.pdb 1 -TADQMVSALLDAE------PPILYSEY-----A---SMMGLLTNLADRELVHMINWAKR 45 usage_00998.pdb 1 --ADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 52 usage_01908.pdb 1 -SPEQLVLTLLEAE------PPHVLISRPS-APFTEASMMMSLTKLADKELVHMISWAKK 52 usage_01988.pdb 1 -SPEQLVLTLLEAE------PPHVLISRPS-APFTEASMMMSLTKLADKELVHMISWAKK 52 usage_02072.pdb 1 ----IFLNVLEAIE------PGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKA 50 usage_02278.pdb 1 DEPQVQAKIMAYLQQEQANRSKH--------EKLSTFGLMCKMADQTLFSIVEWARS--- 49 usage_02286.pdb 1 --ADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 52 usage_02296.pdb 1 -TADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 53 usage_02347.pdb 1 -TADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 53 usage_02396.pdb 1 -TADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 53 usage_03189.pdb 1 -TADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 53 usage_03190.pdb 1 -TADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 53 usage_03521.pdb 1 -TADQMVSALLDAE------PPILYSEY----PFSEASMMGLLTNLADRELVHMINWAKR 49 usage_03638.pdb 1 --ADQMVSALLDAE------PPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKR 52 l e p l l lVh w usage_00048.pdb 51 L 51 usage_00361.pdb 46 V 46 usage_00998.pdb 53 V 53 usage_01908.pdb 53 I 53 usage_01988.pdb 53 I 53 usage_02072.pdb 51 L 51 usage_02278.pdb - usage_02286.pdb 53 V 53 usage_02296.pdb 54 V 54 usage_02347.pdb 54 V 54 usage_02396.pdb 54 V 54 usage_03189.pdb 54 V 54 usage_03190.pdb 54 V 54 usage_03521.pdb 50 V 50 usage_03638.pdb 53 V 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################