################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:02:29 2021 # Report_file: c_0406_15.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00011.pdb # 2: usage_00015.pdb # 3: usage_00058.pdb # 4: usage_00073.pdb # 5: usage_00077.pdb # 6: usage_00110.pdb # 7: usage_00112.pdb # 8: usage_00157.pdb # 9: usage_00158.pdb # 10: usage_00159.pdb # 11: usage_00160.pdb # 12: usage_00161.pdb # 13: usage_00162.pdb # 14: usage_00309.pdb # 15: usage_00317.pdb # 16: usage_00318.pdb # 17: usage_00319.pdb # 18: usage_00453.pdb # # Length: 96 # Identity: 13/ 96 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 96 ( 55.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 96 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -LHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 51 usage_00015.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00058.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00073.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00077.pdb 1 KKYQVLVGEPVRIKC-ALLAQSAGLSLMWYKSSGPGDFEEPIAFDGS--RMSKE--EDSI 55 usage_00110.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00112.pdb 1 -LLAVPAANTVRFRCPAA--GNPTPSISWLKN------GREFRGEHRIGGIKLRHQQWSL 51 usage_00157.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00158.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00159.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00160.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00161.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00162.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00309.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00317.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00318.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00319.pdb 1 RLHAVPAANTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 usage_00453.pdb 1 RLHAVPAFNTVKFRCPAG--GNPMPTMRWLKN------GKEFKQEHRIGGYKVRNQHWSL 52 l aVpa ntV frC A gnp p WlKn g ef ehr g k r wSl usage_00011.pdb 52 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVER- 86 usage_00015.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLD----- 83 usage_00058.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERS 88 usage_00073.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHT--------- 79 usage_00077.pdb 56 WFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGE-- 89 usage_00110.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHT--------- 79 usage_00112.pdb 52 VMESVVPSDRGNYTCVVENKFGSIRQT--------- 78 usage_00157.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00158.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00159.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00160.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00161.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00162.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00309.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLD----- 83 usage_00317.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLD----- 83 usage_00318.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLD----- 83 usage_00319.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 usage_00453.pdb 53 IMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-- 86 mesvvpsD GnYtCVveN gsi t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################