################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:59 2021 # Report_file: c_0224_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00008.pdb # 2: usage_00033.pdb # 3: usage_00054.pdb # 4: usage_00132.pdb # 5: usage_00135.pdb # 6: usage_00136.pdb # 7: usage_00140.pdb # 8: usage_00141.pdb # 9: usage_00142.pdb # 10: usage_00143.pdb # 11: usage_00145.pdb # 12: usage_00146.pdb # 13: usage_00185.pdb # # Length: 131 # Identity: 18/131 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/131 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/131 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 LAIVKRRTGGYDGRGQWRL-RANETEQLPAECYG-ECIVEQGINFSGEVSLVGARGFDGS 58 usage_00033.pdb 1 PGILKTAR-----KGQVRVATAQEARDAYGSLGGVPCVLEKRLPLKYEVSALIARGANGA 55 usage_00054.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00132.pdb 1 PFIVKTRFG-----GQVLINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQ 55 usage_00135.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00136.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00140.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00141.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00142.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00143.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00145.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00146.pdb 1 PSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGE 60 usage_00185.pdb 1 PGILKTARLGYDGKGQVRVSTAREARDAHAALGGVPCVLEKRLPLKYEVSALIARGADGR 60 p Kt GQv C Ek EVS R g usage_00008.pdb 59 TVFYPLTHNLHQDGILRTSVAFPQA-NAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQ 117 usage_00033.pdb 56 SAVFPLAQNTHHGGILSLSVVPAPAASDALVRDAQQAAARIADSLDYVGVLCVEFFVLED 115 usage_00054.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATA- 118 usage_00132.pdb 56 ITFFPLQENEHRNQILFKTIVPARI-D--KTAEAKEQVNKIIQSIHFIGTFTVEFFIDSN 112 usage_00135.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00136.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00140.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00141.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00142.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00143.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00145.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATA- 118 usage_00146.pdb 61 TKVFPVAENIHVNNILHESIVPARI-TEELSQKAIAYAKVLADELELVGTLAVEMFATAD 119 usage_00185.pdb 61 SAAFPLAQNVHHNGILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLED 120 fP N H IL vpa A l vG vE F usage_00008.pdb 118 GLLI------- 121 usage_00033.pdb 116 GSLVANEMAPR 126 usage_00054.pdb ----------- usage_00132.pdb 113 NQLYV------ 117 usage_00135.pdb 120 GEIYI------ 124 usage_00136.pdb 120 GEIYI------ 124 usage_00140.pdb 120 GEIYI------ 124 usage_00141.pdb 120 GEIYI------ 124 usage_00142.pdb 120 GEIYI------ 124 usage_00143.pdb 120 GEIYI------ 124 usage_00145.pdb ----------- usage_00146.pdb 120 GEIYI------ 124 usage_00185.pdb 121 GSFVA------ 125 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################