################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:12 2021 # Report_file: c_0832_31.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00090.pdb # 2: usage_00093.pdb # 3: usage_00165.pdb # 4: usage_00166.pdb # 5: usage_00212.pdb # 6: usage_00213.pdb # 7: usage_00214.pdb # 8: usage_00215.pdb # 9: usage_00216.pdb # 10: usage_00217.pdb # 11: usage_00385.pdb # 12: usage_00463.pdb # 13: usage_00510.pdb # 14: usage_00518.pdb # 15: usage_00754.pdb # # Length: 85 # Identity: 3/ 85 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 85 ( 5.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 85 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 SSGEKKKILFLRSIVN-E-----PDFLIMDEP-CSS-LD--LTAREDFLGFLKEYHSKKK 50 usage_00093.pdb 1 SGGQMRRVAIAGVLAM-Q-----PKVLVLDEP-TAG-LD--PQGRQEMMRLFARLHQEQG 50 usage_00165.pdb 1 SGGQRQRVAIGRTLVA-E-----PSVFLLDEP---L-SNLDAALRVQMRIEISRLHKRLG 50 usage_00166.pdb 1 SGGQRQRVAIGRTLVA-E-----PSVFLLDEP---L-SNLDAALRVQMRIEISRLHKRLG 50 usage_00212.pdb 1 -GGQKQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 48 usage_00213.pdb 1 ----KQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 45 usage_00214.pdb 1 SGGQKQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 49 usage_00215.pdb 1 SGGQKQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 49 usage_00216.pdb 1 SGGQKQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 49 usage_00217.pdb 1 SGGQKQRLAIARALAM-Q-----PEVMLFDEP-TSA-LD--PEMVKEVLNVMKQLANE-G 49 usage_00385.pdb 1 SGGQKVKLVLAAGTWQ-R-----PHLIVLDEP-TNY-LD--RDSLGALSKALKEF----E 46 usage_00463.pdb 1 SGGEKRRVAIASVIVH-E-----PDILILDEP-LVG-LD--REGKTDLLRIVEKWKTL-G 49 usage_00510.pdb 1 SGGQMRRVALAGVLAY-E-----PEIICLDEP-AAG-LD--PMGRLEMMQLFKDYQAA-G 49 usage_00518.pdb 1 --GQRQRLAIARAFLR-N-----PKILMLDEAT--ASLD--SESESMVQKALDSLMK--G 46 usage_00754.pdb 1 SGGERIALGLAFRLAMSLYLAGEISLLILDEP-TPY-LD--EERRRKLITIMERYLKK-I 55 p DEp usage_00090.pdb 51 FTSLYITHRPEEIPDFYSKAVLLK- 74 usage_00093.pdb 51 LTIVLVTHQMEDVAQYAEQVAVMH- 74 usage_00165.pdb 51 RTMIYVTHDQVEAMTLADKIVVLD- 74 usage_00166.pdb 51 RTMIYVTHDQVEAMTLADKIVVLD- 74 usage_00212.pdb 49 MTMVVVTHEMGFAREVGDRVIFMD- 72 usage_00213.pdb 46 MTMVVVTHEMGFAREVGDRVIFMD- 69 usage_00214.pdb 50 MTMVVVTHEMGFAREVGDRVIFMD- 73 usage_00215.pdb 50 MTMVVVTHEMGFAREVGDRVIFMD- 73 usage_00216.pdb 50 MTMVVVTHEMGFAREVGDRVIFMDD 74 usage_00217.pdb 50 MTMVVVTHEMGFAREVGDRVIFMD- 73 usage_00385.pdb 47 GGVIIITHSAEFTKNLTEEVWAVKD 71 usage_00463.pdb 50 KTVILISHDIETVINHVDRVVVLE- 73 usage_00510.pdb 50 HTVILVTHNMDDVADYADDVLALE- 73 usage_00518.pdb 47 RTTLVIAHRLSTIVDADKIYF-IE- 69 usage_00754.pdb 56 PQVILVSHDEELK-DAADHVIRIS- 78 H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################