################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:25 2021 # Report_file: c_1314_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00103.pdb # 2: usage_00235.pdb # 3: usage_00284.pdb # 4: usage_00285.pdb # 5: usage_00341.pdb # 6: usage_00343.pdb # 7: usage_00346.pdb # 8: usage_00400.pdb # 9: usage_00401.pdb # 10: usage_00402.pdb # 11: usage_00403.pdb # 12: usage_00460.pdb # # Length: 37 # Identity: 11/ 37 ( 29.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 37 ( 35.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 37 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 SMSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFK-- 35 usage_00235.pdb 1 ---GHSVRVLQELNKQREKGQYCDATLDVGGLVFKA- 33 usage_00284.pdb 1 -FPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFK-- 34 usage_00285.pdb 1 ----HSQHVLEQLNQQRQLGLLCDCTFVVDGVHFK-- 31 usage_00341.pdb 1 ----HSQHVLEQLNQQRQLGLLCDCTFVGV--HFKAH 31 usage_00343.pdb 1 ----HSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKA- 32 usage_00346.pdb 1 -----SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKA- 31 usage_00400.pdb 1 --PQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKA- 34 usage_00401.pdb 1 DFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAH 37 usage_00402.pdb 1 DFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKA- 36 usage_00403.pdb 1 DFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAH 37 usage_00460.pdb 1 SFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKA- 36 s vL LN QR G CD T FK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################