################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:17 2021 # Report_file: c_0802_16.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00064.pdb # 2: usage_00065.pdb # 3: usage_00542.pdb # 4: usage_00543.pdb # 5: usage_00544.pdb # 6: usage_00545.pdb # 7: usage_00630.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 63 ( 30.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 63 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 -KALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVV---PNPTITVVKEGLGVFQNS- 55 usage_00065.pdb 1 -KALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVV---PNPTITVVKEGLGVFQNS- 55 usage_00542.pdb 1 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVM---PNPTVTAVLEGLKILKDN- 56 usage_00543.pdb 1 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVM---PNPTVTAVLEGLKILKDNN 57 usage_00544.pdb 1 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVM---PNPTVTAVLEGLKILKDN- 56 usage_00545.pdb 1 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVM---PNPTVTAVLEGLKILKDN- 56 usage_00630.pdb 1 LCVALTN---DAA----SPLAGVS----AHTIDIHAGPELSVA-ATKTFVTSAVAGLLLA 48 aliv v d a ydgv pn t t v egl usage_00064.pdb --- usage_00065.pdb --- usage_00542.pdb --- usage_00543.pdb --- usage_00544.pdb --- usage_00545.pdb --- usage_00630.pdb 49 DWA 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################