################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:16:56 2021 # Report_file: c_1405_122.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00049.pdb # 2: usage_00276.pdb # 3: usage_00632.pdb # 4: usage_00633.pdb # 5: usage_00634.pdb # 6: usage_01024.pdb # 7: usage_01046.pdb # 8: usage_01047.pdb # 9: usage_01299.pdb # 10: usage_01300.pdb # 11: usage_01399.pdb # 12: usage_01400.pdb # 13: usage_01401.pdb # 14: usage_01402.pdb # 15: usage_01403.pdb # 16: usage_01428.pdb # 17: usage_01489.pdb # 18: usage_01490.pdb # 19: usage_01491.pdb # 20: usage_01492.pdb # 21: usage_01493.pdb # 22: usage_01494.pdb # 23: usage_01495.pdb # 24: usage_01849.pdb # 25: usage_01850.pdb # # Length: 50 # Identity: 30/ 50 ( 60.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 50 ( 74.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 50 ( 26.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVN------ 38 usage_00276.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_00632.pdb 1 -MGEARRRATQLAHLVGCPP-----NDTELVACLRTRPAQVLVNHEWHVL 44 usage_00633.pdb 1 -MGEARRRATQLAHLVGCPPGGTGGNDTELVACLRTRPAQVLVNHEWHVL 49 usage_00634.pdb 1 -MGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHE---- 39 usage_01024.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHE---- 40 usage_01046.pdb 1 GMGEARRRATQLAHLVGCP-----GNDTELVACLRTRPAQVLVNHEWHVL 45 usage_01047.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01299.pdb 1 GMGEARRRATQLAHLVGCP----GGNDTELVACLRTRPAQVLVNHEWHVL 46 usage_01300.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01399.pdb 1 -MGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 43 usage_01400.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 usage_01401.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHV- 47 usage_01402.pdb 1 -MGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNH----- 38 usage_01403.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 usage_01428.pdb 1 SREEARRRALQLAKLVGCPP-----NDTELVACLRNRPPQELVNHEWHVL 45 usage_01489.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01490.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 usage_01491.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01492.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 usage_01493.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01494.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 usage_01495.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01849.pdb 1 GMGEARRRATQLAHLVGCP------NDTELVACLRTRPAQVLVNHEWHVL 44 usage_01850.pdb 1 GMGEARRRATQLAHLVGCPP--TGGNDTELVACLRTRPAQVLVNHEWHVL 48 mgEARRRAtQLAhLVGCP NDTELVACLRtRPaQvLVN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################