################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:40 2021 # Report_file: c_0770_92.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00178.pdb # 2: usage_00511.pdb # 3: usage_00512.pdb # 4: usage_00783.pdb # # Length: 77 # Identity: 4/ 77 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 77 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 77 ( 39.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 AFISQ--------------SGALGAGIVYKTIKEDIGFSKFISVGNA---DVDFAELEYL 43 usage_00511.pdb 1 ----------AVIHDKGAYGKGLADAFKAAINKGGITEVHYDSVTP-GDKD-FSAL-VTK 47 usage_00512.pdb 1 ----------AVIHDKGAYGKGLADAFKAAINKGGITEVHYDSVTP-GDKD-FSAL-VTK 47 usage_00783.pdb 1 -----QGVTIATLAQ-DAFGRDGVAAFKEALAKTGATLATEEYVPT---TD-FTAV-GQR 49 g l afk a K git sV D f A usage_00178.pdb 44 ADTEE-----DKAIALY 55 usage_00511.pdb 48 LKSAG-----AEVVYFG 59 usage_00512.pdb 48 LKSAG-----AEVVYFG 59 usage_00783.pdb 50 LFDALKDKPGKKIIWVI 66 l a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################