################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:09 2021 # Report_file: c_1307_224.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01400.pdb # 2: usage_01401.pdb # 3: usage_01402.pdb # 4: usage_01403.pdb # 5: usage_01486.pdb # 6: usage_02612.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 33 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 33 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01400.pdb 1 -PLGFMLKAKKKYGGIFTMN--I--CGNRITVV 28 usage_01401.pdb 1 DPLGFMLKAKKKYGGIFTMN--I--CGNRITVV 29 usage_01402.pdb 1 DPLGFMLKAKKKYGGIFTMN--I--CGNRITVV 29 usage_01403.pdb 1 DPLGFMLKAKKKYGGIFTMN--I--CGNRITVV 29 usage_01486.pdb 1 DGDFTMKKFADSY-VAFFANKGS--GNTVTF-- 28 usage_02612.pdb 1 -----YLDDMFEGE--KVAV--CPSCSLMIDVV 24 mlk y f n c i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################