################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:29 2021 # Report_file: c_1484_290.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00088.pdb # 2: usage_00198.pdb # 3: usage_00276.pdb # 4: usage_00277.pdb # 5: usage_00658.pdb # 6: usage_01028.pdb # 7: usage_02021.pdb # 8: usage_02127.pdb # 9: usage_02918.pdb # 10: usage_03091.pdb # 11: usage_04054.pdb # 12: usage_04315.pdb # 13: usage_04638.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 43 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 43 ( 69.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 ---L--DQIKEYKAT---GLAKKRLDGEIAK-V---------- 24 usage_00198.pdb 1 --NL--DAAKTAKMP---KKARERMDAELAQ-V---------- 25 usage_00276.pdb 1 --NL--EAVKGAKNP---KKAQERLDAALAA-LG--------- 26 usage_00277.pdb 1 --NL--EAVKGAKNP---KKAQERLDAALAA-LG--------- 26 usage_00658.pdb 1 --NL--EAAKSVQHN---KLTQKRLDPLFAQ-IQ--------- 26 usage_01028.pdb 1 PANL--EAVKGAKNP---KKAQERLDAALAA-L---------- 27 usage_02021.pdb 1 ---L--DQIKEYKAT---GLAKKRLDGEIAK-V---------- 24 usage_02127.pdb 1 --NL--EAVKGAKNP---KKAQERLDAALAA-LG--------- 26 usage_02918.pdb 1 --NL--EAVKGAKNP---KKAQERLDAALAA-LG--------- 26 usage_03091.pdb 1 --GL--PTFLENSFI---GSAREQLLEALQDLG---------- 26 usage_04054.pdb 1 ----SL-------------HELLAAELTKAL-K-TKLDLSSLA 24 usage_04315.pdb 1 --NL--EAVKGIKYP---GKSKAAAEKIFAE-I---------- 25 usage_04638.pdb 1 ------IPALQAA--QEAQNPLQAQRIVQDA-L---------- 24 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################