################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:27 2021 # Report_file: c_1236_42.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00171.pdb # 4: usage_00198.pdb # 5: usage_00213.pdb # # Length: 41 # Identity: 1/ 41 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 41 ( 53.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 QHVNVVCEI-CGKIAD-----FMDVD-VMD-IAKEAHEQTG 33 usage_00049.pdb 1 QHVNVVCEI-CGKIAD-----FMDVD-VMD-IAKEAHEQTG 33 usage_00171.pdb 1 ---HA-DFL-GEDLFFCCDICAAEFMNMMD-EAFKHTARH- 34 usage_00198.pdb 1 QHVNVVCEI-CGKIAD-----FMDVD-VMD-IAKEAHEQTG 33 usage_00213.pdb 1 YRKQVVI--DG-ETSL-----LDI-L----DTAGQEEY--- 25 v A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################