################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1480_153.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00724.pdb # 2: usage_00769.pdb # 3: usage_00891.pdb # 4: usage_01266.pdb # 5: usage_01328.pdb # 6: usage_01330.pdb # 7: usage_01984.pdb # 8: usage_03421.pdb # 9: usage_03450.pdb # 10: usage_03451.pdb # 11: usage_03452.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 49 ( 4.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 49 ( 34.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00724.pdb 1 -----ELMEAAKEALNAAISVARAGVE------IKELGKAIENEIRKRG 38 usage_00769.pdb 1 ---KDLCEHYRQIAKESCKKG--FLGVRDGTAG--ACFGAQIMVAAKG- 41 usage_00891.pdb 1 ---YDTLLKAVKDATNTGIKCAGIDVR------LCDVGEAIQEVMES-- 38 usage_01266.pdb 1 ---GERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 40 usage_01328.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 usage_01330.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 usage_01984.pdb 1 TEKLMKAGEIAKKVREKAIKLARPGML------LLELAESIEKMIMELG 43 usage_03421.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 usage_03450.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 usage_03451.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 usage_03452.pdb 1 TIMGERLCRITQESLYLALRMVKPGIN------LREIGAAIQKFVEAEG 43 ai #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################