################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:46 2021 # Report_file: c_0658_83.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00004.pdb # 2: usage_00286.pdb # 3: usage_00316.pdb # 4: usage_00442.pdb # 5: usage_00443.pdb # 6: usage_00651.pdb # 7: usage_00664.pdb # 8: usage_00665.pdb # 9: usage_00666.pdb # 10: usage_00667.pdb # 11: usage_00785.pdb # 12: usage_00913.pdb # 13: usage_00979.pdb # 14: usage_00980.pdb # 15: usage_01097.pdb # 16: usage_01381.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 62 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 62 ( 51.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -------PSLAVSLGQRATISCRASE--SV-DS-YG--NSFLHWYQQKSGQPPKLLIY-L 46 usage_00286.pdb 1 -------DSMYGFIGTDVVLHCSFAN--P---L-PSVKITQVTWQKSTNGSK-----QN- 41 usage_00316.pdb 1 AALTQSPVSNPVTLGTSASISCRSTK--SL-LHSNG--ITYLYWYLQKPGQSPQLL---- 51 usage_00442.pdb 1 -------ASLAVSLGQPATISCGASK--SV-RT-SG--YSYMDWNQQKPGQPPRRLIY-L 46 usage_00443.pdb 1 -------ASLAVSLGQPATISCGASK--SV-RT-SG--YSYMDWNQQKPGQPPRRLIY-L 46 usage_00651.pdb 1 -------KSVTRPTRSSAEITCDLTV----------INAFYIHWYLHQEGKAPQRLLY-Y 42 usage_00664.pdb 1 -------GSLAVSLGQRATISCRASK--SV-DT-YG--HSFIHWYQQKPGQPPNLLI--- 44 usage_00665.pdb 1 -------GSLAVSLGQRATISCRASK--SV-DT-YG--HSFIHWYQQKPGQPPNLLI--- 44 usage_00666.pdb 1 -------GSLAVSLGQRATISCRASK--SV-DT-YG--HSFIHWYQQKPGQPPNLLI--- 44 usage_00667.pdb 1 -------GSLAVSLGQRATISCRASK--SV-DT-YG--HSFIHWYQQKPGQPPNLLI--- 44 usage_00785.pdb 1 -------ATLSLSPGERATLSCRASK--GV-ST-SG--YSYLHWYQQKPGQAPRLL---- 43 usage_00913.pdb 1 -------SPLSVALGETARISCGRQA----------LGSRAVQWYQHKPGQAPILLIY-N 42 usage_00979.pdb 1 -------ATLSLSPGERATLSCRASK--GV-ST-SG--YSYLHWYQQKPGQAPRLL---- 43 usage_00980.pdb 1 -------ATLSLSPGERATLSCRASK--GV-ST-SG--YSYLHWYQQKPGQAPRLL---- 43 usage_01097.pdb 1 -------DLYVVEYGSNMTIECKFPVEKQLD-L-AA---LIVYWEME--DKN---IIQ-F 42 usage_01381.pdb 1 -------ASLAVSLGQRATISCRASE--SV-DH-YG--NSFIYWYQQKPGQPPKLLIY-L 46 g C W g usage_00004.pdb -- usage_00286.pdb -- usage_00316.pdb -- usage_00442.pdb -- usage_00443.pdb -- usage_00651.pdb 43 DV 44 usage_00664.pdb -- usage_00665.pdb -- usage_00666.pdb -- usage_00667.pdb -- usage_00785.pdb -- usage_00913.pdb -- usage_00979.pdb -- usage_00980.pdb -- usage_01097.pdb 43 VH 44 usage_01381.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################