################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:22:26 2021 # Report_file: c_0309_5.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00037.pdb # 8: usage_00038.pdb # 9: usage_00045.pdb # 10: usage_00046.pdb # 11: usage_00047.pdb # 12: usage_00048.pdb # 13: usage_00049.pdb # 14: usage_00065.pdb # 15: usage_00071.pdb # 16: usage_00072.pdb # 17: usage_00075.pdb # 18: usage_00076.pdb # 19: usage_00122.pdb # 20: usage_00145.pdb # # Length: 146 # Identity: 52/146 ( 35.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/146 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/146 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --RTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYG 58 usage_00002.pdb 1 --RTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYG 58 usage_00015.pdb 1 -PITAENFRALCTGEKGMG-QSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYG 58 usage_00016.pdb 1 -PITAENFRALCTGEKGMG-QSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYG 58 usage_00017.pdb 1 --ITAENFRALCTGEKGMG-QSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYG 57 usage_00018.pdb 1 -PITAENFRALCTGEKGMG-QSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYG 58 usage_00037.pdb 1 VPKTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 59 usage_00038.pdb 1 --KTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 57 usage_00045.pdb 1 VPKTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 59 usage_00046.pdb 1 -PKTAENFRCLCTGERGMG-RSGKKLHYKGSKFHRVIPNFMLQGGDFTRGNGTGGESIYG 58 usage_00047.pdb 1 --RTAENFRALCTGEKGIG-KSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYG 57 usage_00048.pdb 1 --RTCENFRALCTGEK-IG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYG 56 usage_00049.pdb 1 TPRTCENFRALCTGEK-IG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYG 58 usage_00065.pdb 1 --KTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYG 58 usage_00071.pdb 1 --KTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYG 58 usage_00072.pdb 1 --KTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYG 58 usage_00075.pdb 1 --KTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 57 usage_00076.pdb 1 VPKTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 59 usage_00122.pdb 1 -PRTVENFRALCTGEKGVG-KSGKPLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYG 58 usage_00145.pdb 1 -PRTVENFRALCTGEKGVG-KSGKPLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYG 58 T NF LCtG G GK L FHR i FM QGGD G GGESIYG usage_00001.pdb 59 GMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVT 118 usage_00002.pdb 59 GMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVT 118 usage_00015.pdb 59 -KFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVK 117 usage_00016.pdb 59 -KFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVK 117 usage_00017.pdb 58 -KFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVK 116 usage_00018.pdb 59 -KFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVK 117 usage_00037.pdb 60 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 119 usage_00038.pdb 58 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 117 usage_00045.pdb 60 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 119 usage_00046.pdb 59 EKFPDENFQEKHTGPGVLSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVVEGMNVVK 118 usage_00047.pdb 58 SKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 117 usage_00048.pdb 57 RSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVR 116 usage_00049.pdb 59 RSFTDENFNMKHDQPGLLSMANAGPNTNSSQFLITLVPCPWLDGKHVVFGKVIEGMNVVR 118 usage_00065.pdb 59 GYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIE 118 usage_00071.pdb 59 EKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAK 118 usage_00072.pdb 59 EKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAK 118 usage_00075.pdb 58 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 117 usage_00076.pdb 60 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 119 usage_00122.pdb 59 EKFADEKFVHKHTKPGILSMANAGPNTNGSQFFICTVPCNWLDGKHVVFGEVVEGMDVVK 118 usage_00145.pdb 59 EKFADEKFVHKHTKPGILSMANAGPNTNGSQFFICTVPCNWLDGKHVVFGEVVEGMDVVK 118 F DE F H SMAN G TN SQFf L HVVFG V G V usage_00001.pdb 119 KIEYLKTNSKNRPLADVVILNCG--- 141 usage_00002.pdb 119 KIEYLKTNSKNRPLADVVILNCG--- 141 usage_00015.pdb 118 SIEKCGSQNGKPTKSVCITASG---- 139 usage_00016.pdb 118 SIEKCGSQNGKPTKSVCITASG---- 139 usage_00017.pdb 117 SIEKCGSQNGKPTKSVCITASG---- 138 usage_00018.pdb 118 SIEKCGSQNGKPTKSVCITASG---- 139 usage_00037.pdb 120 AVESNGSQSGKPVKDCMIADCGQLK- 144 usage_00038.pdb 118 AVESNGSQSGKPVKDCMIADCGQ--- 140 usage_00045.pdb 120 AVESNGSQSGKPVKDCMIADCGQ--- 142 usage_00046.pdb 119 AVESKGSQSGRTSADIVISDCGQ--- 141 usage_00047.pdb 118 AIEKVGSSSGRTNKPVVIADCG---- 139 usage_00048.pdb 117 EMEKEGAKSGYVKRSVVITDCGE--- 139 usage_00049.pdb 119 EMEKEGAKSGYVKRSVVITDCGE--- 141 usage_00065.pdb 119 QIENLKTDAASRPYADVRVIDCGV-- 142 usage_00071.pdb 119 ILENVEVKGEKPAKLCVIAECGELKE 144 usage_00072.pdb 119 ILENVEVKGEKPAKLCVIAECGELKE 144 usage_00075.pdb 118 AVESNGSQSGKPVKDCMIADCGQ--- 140 usage_00076.pdb 120 AVESNGSQSGKPVKDCMIADCGQ--- 142 usage_00122.pdb 119 NIEKVGSRSGTCSKQVVIADCGQ--- 141 usage_00145.pdb 119 NIEKVGSRSGTCSKQVVIADCGQ--- 141 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################