################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:46 2021 # Report_file: c_1489_86.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00143.pdb # 2: usage_00442.pdb # 3: usage_00443.pdb # 4: usage_00444.pdb # 5: usage_03081.pdb # 6: usage_03150.pdb # 7: usage_03738.pdb # 8: usage_03739.pdb # 9: usage_03771.pdb # 10: usage_03822.pdb # 11: usage_03840.pdb # 12: usage_04306.pdb # # Length: 44 # Identity: 37/ 44 ( 84.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 44 ( 84.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 44 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL- 42 usage_00442.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 43 usage_00443.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL- 42 usage_00444.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL- 42 usage_03081.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 43 usage_03150.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 43 usage_03738.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL- 42 usage_03739.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 43 usage_03771.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 43 usage_03822.pdb 1 -VDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL- 42 usage_03840.pdb 1 ------GVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 38 usage_04306.pdb 1 NVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG 44 GVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################