################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:56 2021 # Report_file: c_0870_40.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00254.pdb # 2: usage_00255.pdb # 3: usage_00258.pdb # # Length: 84 # Identity: 51/ 84 ( 60.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 84 ( 85.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 84 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00254.pdb 1 TNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLEND 60 usage_00255.pdb 1 TNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLEND 60 usage_00258.pdb 1 -NDAKIAYAILRDRLQLSIKNNWIDTEGNIYFIYTVADLEVILNCGNKKITKIKKELENV 59 NDmKIAYAILRDRLnLSIKNsWvDedGNIYFvYsnekLmeILNCkkeKlTKIKKgLENd usage_00254.pdb 61 GLLIQKRRGLNKPNILYL------ 78 usage_00255.pdb 61 GLLIQKRRGLNKPNILYLMKPIVT 84 usage_00258.pdb 60 DLLIQKR-----PNLLYLLK---- 74 gLLIQKR PNiLYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################