################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:30 2021 # Report_file: c_1394_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00032.pdb # 2: usage_00538.pdb # 3: usage_00769.pdb # 4: usage_00771.pdb # 5: usage_00882.pdb # 6: usage_00883.pdb # 7: usage_00967.pdb # 8: usage_00968.pdb # 9: usage_00971.pdb # 10: usage_00990.pdb # 11: usage_00991.pdb # 12: usage_00993.pdb # # Length: 86 # Identity: 9/ 86 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 86 ( 66.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 86 ( 33.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 VRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSE-----GLSAAMPVA-A- 53 usage_00538.pdb 1 ----LIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 48 usage_00769.pdb 1 -----IEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 47 usage_00771.pdb 1 -----IEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 47 usage_00882.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00883.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00967.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00968.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00971.pdb 1 ----LIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 48 usage_00990.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00991.pdb 1 ---GLIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 49 usage_00993.pdb 1 ----LIEATLDAVRMRLR--PILM------TSLAFILGVMPLVISTGAGSGAQNAVGTGV 48 ieAtldavRmrlr pilm tslafIlgvmplv GsgAqnaVg g usage_00032.pdb 54 ------ILILLSLAVFVALRIIV--- 70 usage_00538.pdb 49 MGGMVTATVLAIFFVPVFFVVVRRRF 74 usage_00769.pdb 48 MGGMVTATVLAIFFVPVFFVVVRRRF 73 usage_00771.pdb 48 MGGMVTATVLAIFFVPVFFVVVRRRF 73 usage_00882.pdb 50 MGGMVTATVLAIFFVPVFFVVVRRRF 75 usage_00883.pdb 50 MGGMVTATVLAIFFVPVFFVVVRRR- 74 usage_00967.pdb 50 MGGMVTATVLAIFFVPVFFVVVRRRF 75 usage_00968.pdb 50 MGGMVTATVLAIFFVPVFFVVVRRRF 75 usage_00971.pdb 49 MGGMVTATVLAIFFVPVFFVVVRRRF 74 usage_00990.pdb 50 MGGMVTATVLAIFFVPVFFVVVRRRF 75 usage_00991.pdb 50 MGGMVTATVLAIFFVPVFFVVVRR-- 73 usage_00993.pdb 49 MGGMVTATVLAIFFVPVFFVVVRRRF 74 atvLaiffVpVffvvvr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################