################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:04 2021 # Report_file: c_1143_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00063.pdb # 2: usage_00084.pdb # 3: usage_00340.pdb # 4: usage_00345.pdb # 5: usage_00346.pdb # 6: usage_00369.pdb # 7: usage_00669.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 28 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 28 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 --IAV-PKPSLQLDASPDWQVQGSV--- 22 usage_00084.pdb 1 --IAV-PKPSLQLDASPDWQVQGSVE-- 23 usage_00340.pdb 1 --IAV-PKPSLQLDASPDWQVQGSVE-- 23 usage_00345.pdb 1 G-IAV-PKPSLQLDASPDWQVQGSV--- 23 usage_00346.pdb 1 --IAV-PKPSLQLDASPDWQVQGSVE-- 23 usage_00369.pdb 1 A-VVFQKCQLVARKPGKYQQNMV----- 22 usage_00669.pdb 1 LAEAK-GLLRMPRQ----VRAAQVEAEE 23 a q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################