################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:19 2021 # Report_file: c_0145_18.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00031.pdb # 2: usage_00260.pdb # 3: usage_00271.pdb # 4: usage_00299.pdb # 5: usage_00300.pdb # 6: usage_00335.pdb # 7: usage_00489.pdb # 8: usage_00578.pdb # 9: usage_00579.pdb # # Length: 113 # Identity: 19/113 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/113 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/113 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQ-S--IS-SYLNWYQQKP-GKAPKLLIYAASSLQ 55 usage_00260.pdb 1 ----LTQPASVSGSPGQSITISCAGTSSDVG-GYNYVSWYQQHP-GKAPKLMIYEDSKRP 54 usage_00271.pdb 1 ----LTQPPSASGSPGQSITISCTG---T--SN-NFVSWYQQHA-GKAPKLVIYDVNKRP 49 usage_00299.pdb 1 ---ALTQPPSASGSLGQSVTISCTGTSSDVGGY-NYVSWYQQHA-GKAPKVIIYEVNKRP 55 usage_00300.pdb 1 ---ALTQPPSASGSLGQSVTISCTGTSSDVGGY-NYVSWYQQHA-GKAPKVIIYEVNKRP 55 usage_00335.pdb 1 --AVVTQESALTTSPGETVTLTCRSSTGAVT-TSNYANWVQETP-DHLFTGLIGGTNNRA 56 usage_00489.pdb 1 ---ALTQPTSVSANLGGSVEITCSG---S--D--YDYGWYQQKAPGSAPVTVIYWNDKRP 50 usage_00578.pdb 1 ----LTQPPSASGSPGQSITISCTG---T--SN-NFVSWYQQHA-GKAPKLVIYDVNKRP 49 usage_00579.pdb 1 ----LTQPPSASGSPGQSITISCTG---T--SN-NFVSWYQQHA-GKAPKLVIYDVNKRP 49 tqp s s s G ti C WyQq g ap Iy r usage_00031.pdb 56 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYS--TPNTFGQGTKVEI 106 usage_00260.pdb 55 SGVSNRFSGSKSGNTASLTISGLQAEDEADYYCISYIS-SNTRLFGGGTKLAV 106 usage_00271.pdb 50 SGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NWDVIFGGGTKLTV 101 usage_00299.pdb 56 SGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEG-SDNFVFGTGTKVTV 107 usage_00300.pdb 56 SGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEG-SDNFVFGTGTKVTV 107 usage_00335.pdb 57 PGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYS-NHLVFGGGTKLTVL 108 usage_00489.pdb 51 SDIPSRFSGSTSGSTSTLTITGVQAEDEAVYYCGAYDGSAGGGIFGAGTTLTV 103 usage_00578.pdb 50 SGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NWDVIFGGGTKLTV 101 usage_00579.pdb 50 SGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NWDVIFGGGTKLTV 101 sgvp RFSGS sG LT g Q DeA YyC fG gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################