################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:56 2021 # Report_file: c_1224_74.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00181.pdb # 5: usage_00335.pdb # 6: usage_00467.pdb # 7: usage_00554.pdb # 8: usage_00555.pdb # 9: usage_00781.pdb # 10: usage_00831.pdb # 11: usage_01001.pdb # # Length: 23 # Identity: 11/ 23 ( 47.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 23 ( 87.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 23 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_00016.pdb 1 TVAWGVCNHAFHFHCISRWL--- 20 usage_00017.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_00181.pdb 1 VVVWGECNHSFHNCCMSLWVKQN 23 usage_00335.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_00467.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_00554.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_00555.pdb 1 TVAWGVCNHAFHFHCISRWLKTR 23 usage_00781.pdb 1 TVAWGVCNHAFHFHCISRWLKTR 23 usage_00831.pdb 1 TVAWGVCNHAFHFHCISRWLK-- 21 usage_01001.pdb 1 TVAWGVCNHAFHFHCISRWL--- 20 tVaWGvCNHaFHfhCiSrWl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################