################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:59:36 2021 # Report_file: c_0425_3.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00003.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00020.pdb # 6: usage_00021.pdb # 7: usage_00029.pdb # 8: usage_00030.pdb # 9: usage_00031.pdb # 10: usage_00038.pdb # 11: usage_00039.pdb # 12: usage_00040.pdb # 13: usage_00041.pdb # 14: usage_00045.pdb # 15: usage_00047.pdb # 16: usage_00048.pdb # 17: usage_00052.pdb # 18: usage_00055.pdb # # Length: 74 # Identity: 15/ 74 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 74 ( 27.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 74 ( 29.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -----------DR-RSS-GVPDRFSGSKSGTSASLAISGLRSEDEADYYCLSWDD-SLNG 46 usage_00014.pdb 1 -APKLVI-YDVNK-RPS-GVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NW-D 54 usage_00015.pdb 1 -APKLVI-YDVNK-RPS-GVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NW-D 54 usage_00016.pdb 1 -APKLVI-YDVNK-RPS-GVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVG-NW-D 54 usage_00020.pdb 1 -APKLLI-YSSNQ-RSS-GVPDRFSGSKSGTSASLAISGLQSEDDADYYCASWDD-SLNG 55 usage_00021.pdb 1 -----------DQ-RPS-VVPDRFSGSKSGTSASLAISGLQSEDEAEYYCAAWDD-SLKG 46 usage_00029.pdb 1 -----------NQ-RPS-GVPDRFSGSKSGTSASLAISGLRSEDEADYYCEAWDG-GLRG 46 usage_00030.pdb 1 -APKLML-YDVTS-RPS-GVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTS-RG-T 54 usage_00031.pdb 1 APKLIIFD---VNRRPSGLS-NRFSASKSGNTASLTISGLQAEDEADYYCTSYHP-TK-T 54 usage_00038.pdb 1 -APKLLI-YGNNE-RPS-GVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDD-SLNG 55 usage_00039.pdb 1 -----------NE-RPS-GVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDD-SLNG 46 usage_00040.pdb 1 -APILLF-YGKNN-RPS-GVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRL 56 usage_00041.pdb 1 -APILLF-YGKNN-RPS-GVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRL 56 usage_00045.pdb 1 -PPKPLI-YWAST-RES-GVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDY---SYP 53 usage_00047.pdb 1 -APKLLI-YSSNQ-RSS-GVPDRFSGSKSGTSASLAISGLQSEDDADYYCASWDD-SLNG 55 usage_00048.pdb 1 -SPVVVI-YQDNR-RPS-GIPERFSGSSSGNTATLTISGTQTLDEADYYCQVWDS-NA-S 54 usage_00052.pdb 1 -SPKLLI-YWAST-RES-GVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSY----NL 52 usage_00055.pdb 1 -APILLF-YGKNN-RPS-GVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRL 56 R S RFsgS S L S D A YYC usage_00003.pdb 47 WVFGGG-TKVTVLD 59 usage_00014.pdb 55 VIFGGG-TKLTV-- 65 usage_00015.pdb 55 VIFGGG-TKLTV-- 65 usage_00016.pdb 55 VIFGGG-TKLTV-- 65 usage_00020.pdb 56 VVFGGG-TKLTV-- 66 usage_00021.pdb 47 AVFGGG-TQLTV-- 57 usage_00029.pdb 47 GVFGGG-TKLTV-- 57 usage_00030.pdb 55 WVFGGG-TKLTV-- 65 usage_00031.pdb 55 ILFGGG-TKLTV-- 65 usage_00038.pdb 56 FWVFGGGTKLTV-- 67 usage_00039.pdb 47 FWVFGGGTKLTV-- 58 usage_00040.pdb 57 SVFGGG-TKLTVL- 68 usage_00041.pdb 57 SVFGGG-TKLTVL- 68 usage_00045.pdb 54 YTFGQG-TKLEI-- 64 usage_00047.pdb 56 VVFGGG-TKLTV-- 66 usage_00048.pdb 55 VVFGGG-TKLTV-- 65 usage_00052.pdb 53 YTFGGG-TKLEI-- 63 usage_00055.pdb 57 SVFGGG-TKLTVL- 68 gG Tkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################