################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:09 2021 # Report_file: c_1350_11.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00023.pdb # 2: usage_00032.pdb # 3: usage_00113.pdb # 4: usage_00114.pdb # 5: usage_00271.pdb # 6: usage_00389.pdb # 7: usage_00529.pdb # 8: usage_00530.pdb # 9: usage_00636.pdb # 10: usage_00644.pdb # # Length: 34 # Identity: 1/ 34 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 34 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 34 ( 52.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 usage_00032.pdb 1 K--ANAEQFMSWMKGPKAV---AIIKAAGYVLP- 28 usage_00113.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 usage_00114.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 usage_00271.pdb 1 -GWLEFRTA------SKVA---DILDGLGYQLAL 24 usage_00389.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 usage_00529.pdb 1 N--ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 28 usage_00530.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 usage_00636.pdb 1 --------NLRMWENPVTQNNIRLLKDYGVSIY- 25 usage_00644.pdb 1 ---ATVKAFYDYLKGPQAA---EIFKRYGFTIK- 27 p i k G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################