################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:48 2021 # Report_file: c_0137_15.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00018.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00032.pdb # 7: usage_00057.pdb # 8: usage_00058.pdb # 9: usage_00077.pdb # 10: usage_00078.pdb # 11: usage_00081.pdb # 12: usage_00082.pdb # 13: usage_00089.pdb # 14: usage_00096.pdb # 15: usage_00097.pdb # 16: usage_00131.pdb # 17: usage_00135.pdb # 18: usage_00136.pdb # 19: usage_00170.pdb # 20: usage_00196.pdb # 21: usage_00213.pdb # 22: usage_00215.pdb # 23: usage_00216.pdb # # Length: 162 # Identity: 23/162 ( 14.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/162 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/162 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 FPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAG 60 usage_00028.pdb 1 ----------APALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAG 50 usage_00029.pdb 1 ----------APALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAG 50 usage_00030.pdb 1 ----------APALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAG 50 usage_00031.pdb 1 ---------IGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAG 51 usage_00032.pdb 1 ---------IGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAG 51 usage_00057.pdb 1 --LMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAG 58 usage_00058.pdb 1 --LMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAG 58 usage_00077.pdb 1 ---------VGAALAAGNACVVKPAEDACLSVLRVAELAAEAGLPAGALNIVTGYGHEAG 51 usage_00078.pdb 1 ----------GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAG 50 usage_00081.pdb 1 ----------GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAG 50 usage_00082.pdb 1 ---------LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAG 51 usage_00089.pdb 1 --ILMAAWKFGPALAAGNSVVLKPSEKSPLTAIRVAQLAFEAGIPAGVFNVVPGAG-EPG 57 usage_00096.pdb 1 ----------GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAG 50 usage_00097.pdb 1 -PLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAG 59 usage_00131.pdb 1 ---------IAPALATGCTVVLKPAEDTPLSALRLGELIQAAGFPDGVVNIVTGYGHTAG 51 usage_00135.pdb 1 ---------MGAALATGCTIVLKPAEQTPLSLLYAAKLFKEAGFPNGVVNFVPGFGPEAG 51 usage_00136.pdb 1 ---------MGAALATGCTIVLKPAEQTPLSLLYAAKLFKEAGFPNGVVNFVPGFGPEAG 51 usage_00170.pdb 1 --LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVG 58 usage_00196.pdb 1 ----------GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAG 50 usage_00213.pdb 1 -PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAG 59 usage_00215.pdb 1 ---------TAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVG 51 usage_00216.pdb 1 ---------TAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVG 51 L G K a p A P G N G G G usage_00018.pdb 61 AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA-DMDWAVE 119 usage_00028.pdb 51 AAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADA-DLDYAVE 109 usage_00029.pdb 51 AAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADA-DLDYAVE 109 usage_00030.pdb 51 AAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADA-DLDYAVE 109 usage_00031.pdb 52 AAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADA-DLDSAVE 110 usage_00032.pdb 52 AAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADA-DLDSAVE 110 usage_00057.pdb 59 AALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADA-DLERALD 116 usage_00058.pdb 59 AALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADA-DLERALD 116 usage_00077.pdb 52 AALARHPGIDHISFTGSPATGKLVTQMAAE-NHVPVTLELGGKSPQIVFADA-DLDAALP 109 usage_00078.pdb 51 AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA-DMDWAVE 109 usage_00081.pdb 51 AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA-DMDWAVE 109 usage_00082.pdb 52 AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA-DMDWAVE 110 usage_00089.pdb 58 KLLALHRDVDCIAFTGSTAVGKLIMQYAAQSNLKRAWLELGGKSPNIVLPDCPDLDRAAQ 117 usage_00096.pdb 51 AAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADA-DLDNAVE 109 usage_00097.pdb 60 AAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADA-DLDNAVE 118 usage_00131.pdb 52 AALSRDPRIDKIAFTGSTQTGKTIGHAALD-NMTRMSLELGGKSPVIVLPDV-DLDKAAQ 109 usage_00135.pdb 52 AAIVNHHDIDKVAFTGSTVTGKYIMRQSAE-MIKHVTLELGGKSPNIILEDA-DLEEAIN 109 usage_00136.pdb 52 AAIVNHHDIDKVAFTGSTVTGKYIMRQSAE-MIKHVTLELGGKSPNIILEDA-DLEEAIN 109 usage_00170.pdb 59 QRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC-DLNKAVQ 117 usage_00196.pdb 51 AAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADA-DLDNAVE 109 usage_00213.pdb 60 DALVRHPKVAKVAFTGSTEVGRIIGSACGR-SLKAVSLELGGKSPVIVLADC-DPQEAAE 117 usage_00215.pdb 52 QRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC-DLNKAVQ 110 usage_00216.pdb 52 QRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC-DLNKAVQ 110 h TG t G ELG K P D D A usage_00018.pdb 120 QAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSR- 160 usage_00028.pdb 110 QAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRR- 150 usage_00029.pdb 110 QAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRR- 150 usage_00030.pdb 110 QAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRR- 150 usage_00031.pdb 111 FAHQGVFTNQGQSCIAASKLFVEEAIY--------------- 137 usage_00032.pdb 111 FAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAK--- 149 usage_00057.pdb 117 AVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAI- 157 usage_00058.pdb 117 AVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAI- 157 usage_00077.pdb 110 VLVSAIVQNGGQTCSAGSRVLIERAVYEPLVERLATAFNGL- 150 usage_00078.pdb 110 QAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSR- 150 usage_00081.pdb 110 QAHFALFFNQGQCCCAGSRTFVQEDIY--------------- 136 usage_00082.pdb 111 QAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSR- 151 usage_00089.pdb 118 TAAGAIFYNMGEMCTAGSRLLVHRDIKDAFIEKLVAAARAYV 159 usage_00096.pdb 110 FAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKK-- 149 usage_00097.pdb 119 FAHHGVFYHQGQCCIAASRIFVEESIY--------------- 145 usage_00131.pdb 110 GVANAIFFNQGQVCTAGSRAYIHSKVF--------------- 136 usage_00135.pdb 110 GAFQGIMYNHGQNCSAGSRVFVHRKHYETVVDALVKMANN-- 149 usage_00136.pdb 110 GAFQGIMYNHGQNCSAGSRVFVHRKHYETVVDALVKMANN-- 149 usage_00170.pdb 118 MGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKM- 158 usage_00196.pdb 110 FAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKK-- 149 usage_00213.pdb 118 GAAAAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESI- 158 usage_00215.pdb 111 MGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKM- 151 usage_00216.pdb 111 MGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKM- 151 G A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################