################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:40 2021 # Report_file: c_1343_16.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00073.pdb # 2: usage_00388.pdb # 3: usage_00390.pdb # 4: usage_00447.pdb # 5: usage_00535.pdb # 6: usage_00597.pdb # 7: usage_00598.pdb # 8: usage_00599.pdb # 9: usage_00600.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 55 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 55 ( 52.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 -RQGLVKMNEFVTLCARDRLPIVWIQDTTGID------V----GNDAEKAE---- 40 usage_00388.pdb 1 -------TEPEFLSALTHSPILLYFGH---G--SGAQYIR---SRNIRHL----- 35 usage_00390.pdb 1 DIDSSRKAARFVRFCDAFEIPLLTLIDVPGFL------P----GTSQEYGG---- 41 usage_00447.pdb 1 -----QQKAETLLAKLQEGQNIALVSD---AGTPLI----NDPGYHLVRTCREAG 43 usage_00535.pdb 1 DINASDKAAEFVNFCDSFNIPLVQLVDVPGFL------P----GVQQEYGG---- 41 usage_00597.pdb 1 TPQGAAKAAQFIQLCEQSNTPLLFLHNTTGFM------V----GTESERQG---- 41 usage_00598.pdb 1 SPTGLKKTLRLQQIAMENKLPVVTLTESGGAN------L----N--YAAEI---- 39 usage_00599.pdb 1 TPQGAAKAAQFIQLCEQSNTPLLFLHNTTGFM------V----GTESERQG---- 41 usage_00600.pdb 1 TPQGAAKAAQFIQLCEQSNTPLLFLHNTTGFM------V----GTESERQG---- 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################