################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:24:07 2021 # Report_file: c_0101_11.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00003.pdb # 2: usage_00013.pdb # 3: usage_00060.pdb # 4: usage_00100.pdb # 5: usage_00105.pdb # 6: usage_00108.pdb # 7: usage_00109.pdb # 8: usage_00124.pdb # 9: usage_00189.pdb # 10: usage_00190.pdb # 11: usage_00191.pdb # 12: usage_00199.pdb # 13: usage_00200.pdb # 14: usage_00204.pdb # 15: usage_00205.pdb # 16: usage_00206.pdb # 17: usage_00207.pdb # 18: usage_00231.pdb # 19: usage_00243.pdb # 20: usage_00250.pdb # 21: usage_00255.pdb # 22: usage_00262.pdb # 23: usage_00310.pdb # 24: usage_00317.pdb # 25: usage_00318.pdb # 26: usage_00326.pdb # 27: usage_00327.pdb # 28: usage_00328.pdb # 29: usage_00335.pdb # 30: usage_00336.pdb # 31: usage_00345.pdb # 32: usage_00363.pdb # # Length: 232 # Identity: 58/232 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/232 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/232 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00013.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 57 usage_00060.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00100.pdb 1 ---IEHTLNEKRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-E 55 usage_00105.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 56 usage_00108.pdb 1 ---VEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN 56 usage_00109.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 57 usage_00124.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 56 usage_00189.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00190.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 56 usage_00191.pdb 1 --EIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 57 usage_00199.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-E 55 usage_00200.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 56 usage_00204.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00205.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00206.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 57 usage_00207.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 57 usage_00231.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 56 usage_00243.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVLEYLPGGEMFSHLRRIGRF-E 55 usage_00250.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 57 usage_00255.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 56 usage_00262.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-E 55 usage_00310.pdb 1 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 60 usage_00317.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-E 55 usage_00318.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 56 usage_00326.pdb 1 ---IEHTLNEKRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-E 55 usage_00327.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 56 usage_00328.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 57 usage_00335.pdb 1 --QIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 57 usage_00336.pdb 1 ----EHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 55 usage_00345.pdb 1 ---IEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 56 usage_00363.pdb 1 ----QTEKHVFEQA--S-NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 53 e n PFl l F s l v eY GG h r e usage_00003.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00013.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00060.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00100.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-K--GRTW- 111 usage_00105.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTWT 113 usage_00108.pdb 57 PVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-P--DVTY- 112 usage_00109.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00124.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00189.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00190.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-K--GRTW- 112 usage_00191.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-K--GRTW- 113 usage_00199.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 111 usage_00200.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00204.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00205.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00206.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-K--GRTW- 113 usage_00207.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-K--GRTW- 113 usage_00231.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00243.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-K--GRTW- 111 usage_00250.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00255.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00262.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 111 usage_00310.pdb 61 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS- 119 usage_00317.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 111 usage_00318.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00326.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-K--GRTW- 111 usage_00327.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-K--GRTW- 112 usage_00328.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00335.pdb 58 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 113 usage_00336.pdb 56 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 111 usage_00345.pdb 57 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--GRTW- 112 usage_00363.pdb 54 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS- 112 hArFY A i L YLH IYRDLK N D G I TD G K T usage_00003.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00013.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00060.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00100.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00105.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00108.pdb 113 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 172 usage_00109.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00124.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00189.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00190.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00191.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00199.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00200.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00204.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00205.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00206.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00207.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00231.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00243.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00250.pdb 114 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00255.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00262.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00310.pdb 120 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-TEDYLFQVILEKQIRI 178 usage_00317.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00318.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00326.pdb 112 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 171 usage_00327.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00328.pdb 114 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 173 usage_00335.pdb 114 L-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00336.pdb 112 L-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 170 usage_00345.pdb 113 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 172 usage_00363.pdb 113 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD--TEDYLFQVILEKQIRI 170 GTP Y APEi Y vDWWalGvL EM AG PF I R usage_00003.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00013.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 210 usage_00060.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-DGVNDIKNH-------------- 210 usage_00100.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 208 usage_00105.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-DGVNDIKNH-------------- 210 usage_00108.pdb 173 PPFFNEDVKDLLSRLITRDLSQRLGNLQ-NGTEDVKNH-------------- 209 usage_00109.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 210 usage_00124.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 209 usage_00189.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 210 usage_00190.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 213 usage_00191.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00199.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 212 usage_00200.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 209 usage_00204.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00205.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00206.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00207.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 210 usage_00231.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 213 usage_00243.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 208 usage_00250.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 210 usage_00255.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-DGVNDIKNHKWFA---------- 213 usage_00262.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 208 usage_00310.pdb 179 PR-LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-------------- 215 usage_00317.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 208 usage_00318.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 213 usage_00326.pdb 172 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 212 usage_00327.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 209 usage_00328.pdb 174 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNHKWFA---------- 214 usage_00335.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 209 usage_00336.pdb 171 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-NGVNDIKNH-------------- 207 usage_00345.pdb 173 PSHFSSDLKDLLRNLLQVDLTKRFGNLK-DGVNDIKNHKWFA---------- 213 usage_00363.pdb 171 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQK 222 P s L l D R G G Di H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################