################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:24:45 2021 # Report_file: c_0055_19.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00039.pdb # 6: usage_00072.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # 9: usage_00075.pdb # 10: usage_00077.pdb # 11: usage_00078.pdb # 12: usage_00079.pdb # 13: usage_00080.pdb # 14: usage_00279.pdb # 15: usage_00328.pdb # 16: usage_00346.pdb # 17: usage_00347.pdb # 18: usage_00348.pdb # 19: usage_00357.pdb # 20: usage_00358.pdb # # Length: 260 # Identity: 25/260 ( 9.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/260 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 89/260 ( 34.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00011.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00012.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00013.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00039.pdb 1 FDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAG 60 usage_00072.pdb 1 LGDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 58 usage_00073.pdb 1 --DIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 56 usage_00074.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00075.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00077.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00078.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00079.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00080.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00279.pdb 1 LDKVEENYQFMRRHL--PRAGVFYAMKANPTPEILSLLAGLGSHFDVASAGEMEILHELG 58 usage_00328.pdb 1 -GDILKKHLRWLKAL--PRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLG 57 usage_00346.pdb 1 -------------------------------WRVLGTLAALGTGFDCASNTEIQRVRGIG 29 usage_00347.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVACNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00348.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVACNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00357.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 usage_00358.pdb 1 -GDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIG 57 l LA lg gfDcaS Eiq G usage_00010.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00011.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00012.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00013.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00039.pdb 61 IKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINP- 119 usage_00072.pdb 59 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 113 usage_00073.pdb 57 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRISTD 112 usage_00074.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRISTD 113 usage_00075.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00077.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00078.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00079.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00080.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00279.pdb 59 VDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVP----GADVLVRIAV- 113 usage_00328.pdb 58 VPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHP----KAKLVLRIAT- 112 usage_00346.pdb 30 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 84 usage_00347.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00348.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00357.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 usage_00358.pdb 58 VPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRIST- 112 v iyanp K i A v tfd El k a p kA RI usage_00010.pdb 113 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 153 usage_00011.pdb 113 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 153 usage_00012.pdb 113 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 153 usage_00013.pdb 113 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 153 usage_00039.pdb 120 --NIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPI 177 usage_00072.pdb 114 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 154 usage_00073.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00074.pdb 114 DRL-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 158 usage_00075.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00077.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00078.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00079.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00080.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00279.pdb 114 --R-N-------------TKFGAPVEEALDLLKAAQDAG-LHAMGICFHVGSQSLSTAAY 156 usage_00328.pdb 113 -------------------KFGATLKTSRLLLERAKELN-IDVIGVSFHVGSGCTDPDTF 152 usage_00346.pdb 85 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 127 usage_00347.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00348.pdb 113 --L-S-------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 155 usage_00357.pdb 113 ------------------VKFGAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 153 usage_00358.pdb 113 ---------------------GAKVEDCRFILEQAKKLN-IDVTGVSFHVGSGSTDASTF 150 Ga l Ak gv FHvGS d usage_00010.pdb 154 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 206 usage_00011.pdb 154 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 206 usage_00012.pdb 154 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 206 usage_00013.pdb 154 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 206 usage_00039.pdb 178 IEASQKVAKIAKSLIALGIDLRFFDVGGGIGVS-----YENEETIKLYDYAQGILNAL-- 230 usage_00072.pdb 155 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 207 usage_00073.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00074.pdb 159 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 211 usage_00075.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00077.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00078.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00079.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00080.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00279.pdb 157 EEALLVARRLFDEAEEMGMHLTDLDIGGGFPVP--DAKGL---NVDLAAMMEAINKQIDR 211 usage_00328.pdb 153 VQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSED----T---KLKFEEITSVINPALDK 205 usage_00346.pdb 128 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 180 usage_00347.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00348.pdb 156 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 208 usage_00357.pdb 154 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 206 usage_00358.pdb 151 AQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRD----A---PLKFEEIAGVINNALEK 203 A r fd e G lDiGGGfp k In al usage_00010.pdb 207 H------------------- 207 usage_00011.pdb 207 H------------------- 207 usage_00012.pdb 207 H------------------- 207 usage_00013.pdb 207 H------------------- 207 usage_00039.pdb -------------------- usage_00072.pdb 208 H------------------- 208 usage_00073.pdb 209 H------------------- 209 usage_00074.pdb -------------------- usage_00075.pdb 209 H------------------- 209 usage_00077.pdb 209 HF------------------ 210 usage_00078.pdb -------------------- usage_00079.pdb -------------------- usage_00080.pdb -------------------- usage_00279.pdb 212 L------------------- 212 usage_00328.pdb 206 YFPSD---SG---------- 212 usage_00346.pdb 181 HFPPDLKL-TIVAEPGRYYV 199 usage_00347.pdb 209 HF------------------ 210 usage_00348.pdb 209 H------------------- 209 usage_00357.pdb -------------------- usage_00358.pdb 204 HFP----------------- 206 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################