################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:24 2021 # Report_file: c_1111_43.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00080.pdb # 2: usage_00203.pdb # 3: usage_00204.pdb # # Length: 102 # Identity: 75/102 ( 73.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/102 ( 79.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/102 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 KVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMG---MKNQLAVLR 57 usage_00203.pdb 1 KVKRSVKDAAKKGQKDVCIVLAK-EIRSRKAVSKLYASKAHN------SVLGKNQLAVLR 53 usage_00204.pdb 1 KVKRSVKDAAKKGQKDVCIVLAK-EIRSRKAVSKLYASKAHN------SVLGKNQLAVLR 53 KVKRSVKDAAKKGQKDVCIVLAK eIRSRKAVSKLYASKAHn gKNQLAVLR usage_00080.pdb 58 VAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAG--- 96 usage_00203.pdb 54 VAGSLQKSTEVK-AQ-SLVKIPEIQA-TRELSKE-----KAG 87 usage_00204.pdb 54 VAGSLQKSTEVK-AQ-SLVKIPEIQA-TRELSKE-----KAG 87 VAGSLQKSTEVk Aq SLVKIPEIQA tRELSKE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################