################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:47 2021 # Report_file: c_0828_80.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00061.pdb # 2: usage_00234.pdb # 3: usage_00354.pdb # 4: usage_00447.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 76 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 76 ( 44.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 ----EAVARPYAD----GI-----R-LLLEPLGR-----DTAGAVLLGVAEALKEGAERL 41 usage_00234.pdb 1 RTESVALALEAAGD----A-----EFVLVHDA--ARALTPPALIARVVAALK--EGHSAV 47 usage_00354.pdb 1 RTDTVNLALTVLS-G--TAE-P--EFVLVHDA--ARALTPPALVARVVEALR--DGYAAV 50 usage_00447.pdb 1 RNTSIKNIIEAID-AYR--PLTPEDIVVTHDS--VRPFITLRMIQDNIQLAQ---NHDAV 52 a vl hd a a g av usage_00061.pdb 42 LVLPADHYVG------ 51 usage_00234.pdb 48 VPGLAPAD--TIKA-- 59 usage_00354.pdb 51 VPVLPLSD--TIKA-- 62 usage_00447.pdb 53 DTVVEAVD--TIVEST 66 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################