################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:29:43 2021 # Report_file: c_1484_35.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00105.pdb # 2: usage_00297.pdb # 3: usage_01003.pdb # 4: usage_01004.pdb # 5: usage_01005.pdb # 6: usage_01006.pdb # 7: usage_01007.pdb # 8: usage_01008.pdb # 9: usage_01009.pdb # 10: usage_01010.pdb # 11: usage_01175.pdb # 12: usage_01187.pdb # 13: usage_01188.pdb # 14: usage_01386.pdb # 15: usage_01387.pdb # 16: usage_01388.pdb # 17: usage_01426.pdb # 18: usage_01427.pdb # 19: usage_01832.pdb # 20: usage_01833.pdb # 21: usage_01834.pdb # 22: usage_01835.pdb # 23: usage_02499.pdb # 24: usage_04478.pdb # 25: usage_04479.pdb # 26: usage_04480.pdb # 27: usage_04481.pdb # 28: usage_04482.pdb # 29: usage_04815.pdb # 30: usage_04816.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 62 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 62 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 -TKQEKTALNMARFIRSQTLTLLEKLNEL---ADAADEQADICESLHDHADELYRSCLAR 56 usage_00297.pdb 1 -----SPAQARRFCATVRSAVLDALDRLPEDAD--TFAFGMVVSHEHQHDETMLQALNLR 53 usage_01003.pdb 1 -TKQEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 54 usage_01004.pdb 1 -TKQEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 54 usage_01005.pdb 1 -TKQEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 54 usage_01006.pdb 1 GTKQEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALA- 54 usage_01007.pdb 1 ----EKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 51 usage_01008.pdb 1 ---QEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 52 usage_01009.pdb 1 --KQEKTILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 53 usage_01010.pdb 1 ------TILNMARFIRSQALTILEKANEL---D--ADEIADIAESIHDHADEIYRSALAR 49 usage_01175.pdb 1 -TKQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_01187.pdb 1 -TKQEKTALNMARFIRSQTLTLLEKLNEL---ADAADEQADICESLHDHADELYRSCLAR 56 usage_01188.pdb 1 --KQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 53 usage_01386.pdb 1 GTKQEKTALNMARFIRSQTLTLLEKLNEL---G--ADEQADICESLHDHADELYRSCLAR 55 usage_01387.pdb 1 ---QEKTALNMARFIRSQTLTLLEKLNEL---G--ADEQADICESLHDHADELYRSCLAR 52 usage_01388.pdb 1 GTKQEKTALNMARFIRSQTLTLLEKLNEL---G--ADEQADICESLHDHADELYRSCLAR 55 usage_01426.pdb 1 --KQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 53 usage_01427.pdb 1 --KQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 53 usage_01832.pdb 1 -TKQEKTALNMARWIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_01833.pdb 1 -TKQEKTALNMARWIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_01834.pdb 1 -TKQEKTALNMARWIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_01835.pdb 1 --KQEKTALNMARHIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLA- 52 usage_02499.pdb 1 --KQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADIAESLHDHADELYRSVLAR 53 usage_04478.pdb 1 -TKQEKTALNMARYIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSC--- 51 usage_04479.pdb 1 -TKQEKTALNMARYIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_04480.pdb 1 ---QEKTALNMARYIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 52 usage_04481.pdb 1 -TKQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 54 usage_04482.pdb 1 GTKQEKTALNMARFIRSQTLTLLEKLNEL---D--ADEQADICESLHDHADELYRSCLAR 55 usage_04815.pdb 1 --KQEKTALNMARFIRSQTLTLLEKLNEL---P--GDEQADICESLHDHADELYRSCLAR 53 usage_04816.pdb 1 -TKQEKTALNMARFIRSQTLTLLEKLNEL---P--GDEQADICESLHDHADELYRSCLAR 54 t lnmar irsq lt lek nel de adi es HdHade yrs usage_00105.pdb -- usage_00297.pdb -- usage_01003.pdb 55 F- 55 usage_01004.pdb -- usage_01005.pdb -- usage_01006.pdb -- usage_01007.pdb 52 FG 53 usage_01008.pdb -- usage_01009.pdb 54 F- 54 usage_01010.pdb -- usage_01175.pdb -- usage_01187.pdb 57 FG 58 usage_01188.pdb -- usage_01386.pdb -- usage_01387.pdb -- usage_01388.pdb -- usage_01426.pdb -- usage_01427.pdb -- usage_01832.pdb 55 FG 56 usage_01833.pdb -- usage_01834.pdb 55 FG 56 usage_01835.pdb -- usage_02499.pdb -- usage_04478.pdb -- usage_04479.pdb -- usage_04480.pdb -- usage_04481.pdb -- usage_04482.pdb -- usage_04815.pdb 54 FG 55 usage_04816.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################