################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:20 2021 # Report_file: c_0197_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00004.pdb # 2: usage_00029.pdb # 3: usage_00060.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00076.pdb # 7: usage_00077.pdb # 8: usage_00115.pdb # # Length: 200 # Identity: 65/200 ( 32.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/200 ( 37.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/200 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 --------------------DKEELLECIQQLVKLDQEWV-PYSTSASLYIRPTFIGTEP 39 usage_00029.pdb 1 --------------------PDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEP 40 usage_00060.pdb 1 --------------------PEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEP 40 usage_00074.pdb 1 ----------------------EELLECIQQLVKLDQEWV-PYSTSASLYIRPAFIGTEP 37 usage_00075.pdb 1 -NLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWV-PYSTSASLYIRPAFIGTEP 58 usage_00076.pdb 1 PNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWV-PYSTSASLYIRPAFIGTEP 59 usage_00077.pdb 1 ----------------------EELLECIQQLVKLDQEWV-PYSTSASLYIRPAFIGTEP 37 usage_00115.pdb 1 --------------------DKEELLECIQQLVKLDQEWV-PYSTSASLYIRPTFIGTEP 39 e E QL D WV p sLY RP i TEP usage_00004.pdb 40 SLGVKKPTKALLFVLLSPVGPY-----FNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 94 usage_00029.pdb 41 GLGVRPATQYRYLLIASPAGAYFKG-GIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASL 99 usage_00060.pdb 41 GLGVRPSNEYRYLLIASPAGAYFKG-GIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASL 99 usage_00074.pdb 38 SLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 97 usage_00075.pdb 59 SLGVKKPTKALLFVLLSPVGP------FNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 112 usage_00076.pdb 60 SLGVKKPTKALLFVLLSPVGP------FNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 113 usage_00077.pdb 38 SLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 97 usage_00115.pdb 40 SLGVKKPTKALLFVLLSPVGPYF----FNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSL 95 LGV t SP G PVS W YVRA GGTG K GGNY SL usage_00004.pdb 95 FAQCEAVDNGCQQVLWLYGED-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 151 usage_00029.pdb 100 LAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSG---GSARLVTPELSGSLLPG 156 usage_00060.pdb 100 LAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSG---GSARLVTPELSGSLLPG 156 usage_00074.pdb 98 FAQCEDVDNGCQQVLWLYGRD-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 154 usage_00075.pdb 113 FAQCEDVDNGCQQVLWLYGRD-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 169 usage_00076.pdb 114 FAQCEDVDNGCQQVLWLYGRD-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 170 usage_00077.pdb 98 FAQCEDVDNGCQQVLWLYGRD-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 154 usage_00115.pdb 96 FAQCEAVDNGCQQVLWLYGED-HQITEVGTMNLFLYWI-NEDGE-EELATPPLDGIILPG 152 AQ e nGC QV WL i E G MNlF L TP L G LPG usage_00004.pdb 152 VTRRCILDLAHQWGEFKVSE 171 usage_00029.pdb 157 ITRDSLLQLAIDAGFAVEER 176 usage_00060.pdb 157 ITRDSLLQLATDAGFAVEER 176 usage_00074.pdb 155 VTRRCILDLAHQWGEFKVSE 174 usage_00075.pdb 170 VTRRCILDLAHQWGEFKVSE 189 usage_00076.pdb 171 VTRRCILDLAHQWGEFKVSE 190 usage_00077.pdb 155 VTRRCILDLAHQWGEFKVSE 174 usage_00115.pdb 153 VTRRCILDLAHQWGEFKVSE 172 TR L LA G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################