################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:14 2021 # Report_file: c_1399_40.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00109.pdb # 2: usage_00110.pdb # 3: usage_00221.pdb # 4: usage_00234.pdb # 5: usage_00240.pdb # 6: usage_00301.pdb # 7: usage_00305.pdb # 8: usage_00434.pdb # 9: usage_00437.pdb # 10: usage_00536.pdb # 11: usage_00730.pdb # 12: usage_00731.pdb # 13: usage_00855.pdb # 14: usage_00863.pdb # 15: usage_00897.pdb # 16: usage_00915.pdb # 17: usage_01037.pdb # 18: usage_01038.pdb # 19: usage_01455.pdb # # Length: 72 # Identity: 19/ 72 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 72 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 72 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00110.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00221.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 usage_00234.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00240.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 usage_00301.pdb 1 -KKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 59 usage_00305.pdb 1 SAKQRLSLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQN 60 usage_00434.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00437.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00536.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 usage_00730.pdb 1 TKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQL-------ER-I---DKPKALSL 49 usage_00731.pdb 1 TKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQL-------ER-I---DKPKALSL 49 usage_00855.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 usage_00863.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 usage_00897.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_00915.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_01037.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_01038.pdb 1 TKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRN 60 usage_01455.pdb 1 TKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQN 60 k LR VI VLATDMS H KT D L usage_00109.pdb 61 MVHAADLSNPTK 72 usage_00110.pdb 61 MVHAADLSNPTK 72 usage_00221.pdb 61 MVHCADL----- 67 usage_00234.pdb 61 MVHCADL----- 67 usage_00240.pdb 61 MVHCADL----- 67 usage_00301.pdb 60 MVHCADL----- 66 usage_00305.pdb 61 LVHCADL----- 67 usage_00434.pdb 61 MVHCADL----- 67 usage_00437.pdb 61 MVHCADL----- 67 usage_00536.pdb 61 MVHCADLS---- 68 usage_00730.pdb 50 LLHAADI----- 56 usage_00731.pdb 50 LLHAADIS---- 57 usage_00855.pdb 61 MVHCADL----- 67 usage_00863.pdb 61 MVHCADL----- 67 usage_00897.pdb 61 MVHCADL----- 67 usage_00915.pdb 61 MVHCADLS---- 68 usage_01037.pdb 61 MVHCADL----- 67 usage_01038.pdb 61 MVHCADL----- 67 usage_01455.pdb 61 MVHCADL----- 67 H AD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################