################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:47 2021 # Report_file: c_0700_18.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00026.pdb # 2: usage_00249.pdb # 3: usage_00303.pdb # 4: usage_00401.pdb # 5: usage_00405.pdb # 6: usage_00408.pdb # 7: usage_00653.pdb # 8: usage_00682.pdb # 9: usage_00683.pdb # 10: usage_00786.pdb # 11: usage_00818.pdb # # Length: 51 # Identity: 7/ 51 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 51 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 51 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00249.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYN 51 usage_00303.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRT------ 45 usage_00401.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00405.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00408.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00653.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00682.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT------ 45 usage_00683.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT------ 45 usage_00786.pdb 1 KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN 51 usage_00818.pdb 1 -----HKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKK-LLRK----- 40 aekeVkgavysmveFnGklLasinstvRlYewtteK rt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################