################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:59 2021 # Report_file: c_1387_216.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00582.pdb # 2: usage_01224.pdb # 3: usage_02602.pdb # 4: usage_02603.pdb # # Length: 95 # Identity: 0/ 95 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 95 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/ 95 ( 73.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00582.pdb 1 TEDVDDLLVLLIMDYSSEEVEEETAQNILQDFITR---R-E----P----SPISIS---- 44 usage_01224.pdb 1 --------------------REEMVKKCLGELTEVCKSLGKVFGV----HYFNIFNTVTL 36 usage_02602.pdb 1 ---------------------SQDYRELVKRLWEELSKA-K----LRSDRLLPVLE---- 30 usage_02603.pdb 1 --------------------RSQDYRELVKRLWEELSKA-K----LRSDRLLPVLE---- 31 l e k usage_00582.pdb 45 --RVLG----------------------------- 48 usage_01224.pdb 37 KKLAE------SLSSDP-EVLLQID---------- 54 usage_02602.pdb 31 --KYLTFVSSVTSEGNIISLYDHRTSAIALALRAG 63 usage_02603.pdb 32 --KYLTFVSSVTSEGNIISLYDHRTSAIALALRAG 64 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################