################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:02 2021 # Report_file: c_1489_283.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00042.pdb # 2: usage_00519.pdb # 3: usage_00520.pdb # 4: usage_01517.pdb # 5: usage_01518.pdb # 6: usage_02686.pdb # 7: usage_02687.pdb # 8: usage_02688.pdb # 9: usage_02689.pdb # 10: usage_02714.pdb # 11: usage_03203.pdb # 12: usage_03306.pdb # 13: usage_03328.pdb # 14: usage_03903.pdb # 15: usage_03904.pdb # 16: usage_04076.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 59 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 59 ( 81.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ----------------TEIRASVGKMID---G--IGR--FYIQMCTELK--LSDYEGRL 34 usage_00519.pdb 1 ---------------MTIDEIIEAIEKLT--V--SEL--AELVKKLEDKF--------- 29 usage_00520.pdb 1 ---------------MTIDEIIEAIEKLT--V--SEL--AELVKKLEDKF--------- 29 usage_01517.pdb 1 -------------------RIRQIEVKAL--RKLRHPSRSKYLKSLLSLM--------- 29 usage_01518.pdb 1 ------------------------FAPLT--P--VEQ--ATLVHLLDQCL--------- 20 usage_02686.pdb 1 ----------------TIDEIIEAIEKLT--V--SEL--AELVKKLEDK---------- 27 usage_02687.pdb 1 ----------------TIDEIIEAIEKLT--V--SEL--AELVKKLEDKFG-------- 29 usage_02688.pdb 1 ----------------TIDEIIEAIEKLT--V--SEL--AELVKKLEDK---------- 27 usage_02689.pdb 1 ----------------TIDEIIEAIEKLT--V--SEL--AELVKKLEDKF--------- 28 usage_02714.pdb 1 ---------------------FEYLNGLS--Y--TEL--TNLIK--------------- 17 usage_03203.pdb 1 -----------EPVGQIVEAVKVALEATP--P--ELA--DDIADK-------------- 28 usage_03306.pdb 1 ----------------PERVDEIEKVTKH--D--IIA--FCTSIAEQF----------- 26 usage_03328.pdb 1 NQDRINEKLEKLKKESIADQMRELLRAAEXXX--XXX--XXXXXX-------------- 41 usage_03903.pdb 1 ----------------TKDQIIEAVAAMS--V--MDV--VELISAMEEKFG-------- 29 usage_03904.pdb 1 ----------------TKDQIIEAVAAMS--V--MDV--VELISAMEEK---------- 27 usage_04076.pdb 1 -----------------------QKADLP--E--KVK--DKF----------------- 13 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################