################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:22 2021 # Report_file: c_1023_40.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00033.pdb # 2: usage_00311.pdb # 3: usage_00312.pdb # 4: usage_00313.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # 7: usage_00412.pdb # 8: usage_00413.pdb # 9: usage_00414.pdb # 10: usage_00834.pdb # 11: usage_01237.pdb # 12: usage_01238.pdb # # Length: 77 # Identity: 16/ 77 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 77 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 77 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 ---ITIQS-QIG---RTGLDFEKHPYVSAVIEKR-KSIPI-NGVFLTVDSDIPVGSGLGS 51 usage_00311.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00312.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00313.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00410.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00411.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00412.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00413.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00414.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_00834.pdb 1 GVRITSITGDDGRLPKDAE---K-NTVSISILRYLETLGIEQGIEIELTKKPL-GSGLGS 55 usage_01237.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 usage_01238.pdb 1 --EIIIEV-DDKNIPTDPD---K-NVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGS 53 I i dd d K n iv k I Gv it k GSGLGS usage_00033.pdb 52 SAAVTIASIGALNELFG 68 usage_00311.pdb 54 SAASSAGTAYAINELFK 70 usage_00312.pdb 54 SAASSAGTAYAINELFK 70 usage_00313.pdb 54 SAASSAGTAYAINELFK 70 usage_00410.pdb 54 SAASSAGTAYAINELFK 70 usage_00411.pdb 54 SAASSAGTAYAINELFK 70 usage_00412.pdb 54 SAASSAGTAYAINELFK 70 usage_00413.pdb 54 SAASSAGTAYAINELFK 70 usage_00414.pdb 54 SAASSAGTAYAINELFK 70 usage_00834.pdb 56 SAASTVAGVYAINQLLG 72 usage_01237.pdb 54 SAASSAGTAYAINELFK 70 usage_01238.pdb 54 SAASSAGTAYAINELFK 70 SAAs yAiNeLf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################