################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:26 2021 # Report_file: c_1434_250.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00094.pdb # 2: usage_00095.pdb # 3: usage_00096.pdb # 4: usage_00097.pdb # 5: usage_00098.pdb # 6: usage_00099.pdb # 7: usage_00100.pdb # 8: usage_00387.pdb # 9: usage_00388.pdb # 10: usage_03143.pdb # # Length: 78 # Identity: 55/ 78 ( 70.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 78 ( 70.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 78 ( 29.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 ---------------------NVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 39 usage_00095.pdb 1 ---------------------NVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 39 usage_00096.pdb 1 TESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 60 usage_00097.pdb 1 TESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 60 usage_00098.pdb 1 -------------------KSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 41 usage_00099.pdb 1 -------------------KSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 41 usage_00100.pdb 1 -------------------KSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 41 usage_00387.pdb 1 -------------------KSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 41 usage_00388.pdb 1 -------------------KSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 41 usage_03143.pdb 1 --------------------SNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD 40 NVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMAD usage_00094.pdb 40 AKVALEKIYKEIDEIINR 57 usage_00095.pdb 40 AKVALEKIYKEIDEIINR 57 usage_00096.pdb 61 AKVALEKIYKEIDEIINR 78 usage_00097.pdb 61 AKVALEKIYKEIDEIINR 78 usage_00098.pdb 42 AKVALEKIYKEIDEII-- 57 usage_00099.pdb 42 AKVALEKIYKEIDEII-- 57 usage_00100.pdb 42 AKVALEKIYKEIDEII-- 57 usage_00387.pdb 42 AKVALEKIYKEIDEIINR 59 usage_00388.pdb 42 AKVALEKIYKEIDEIINR 59 usage_03143.pdb 41 AKVALEKIYKEIDEIINR 58 AKVALEKIYKEIDEII #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################