################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:19 2021 # Report_file: c_0299_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00084.pdb # 2: usage_00101.pdb # 3: usage_00118.pdb # 4: usage_00119.pdb # 5: usage_00120.pdb # 6: usage_00168.pdb # 7: usage_00169.pdb # 8: usage_00269.pdb # 9: usage_00300.pdb # 10: usage_00301.pdb # 11: usage_00302.pdb # 12: usage_00306.pdb # # Length: 138 # Identity: 34/138 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/138 ( 70.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/138 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 MLAKRIIACLNVKDGRVVK--NFENLRDSGD-PVELGKFYSEIG-IDELVFLDITASVEK 56 usage_00101.pdb 1 MLAKRIIACLDVKDGRVVKGSNFENLRDSGD-PVELGKFYSEIG-IDELVFLDITASVEK 58 usage_00118.pdb 1 MLAKRIIACLDVKDGRVVKGTNFENLRDSGD-PVELGKFYSEIG-IDELVFLDITASVEK 58 usage_00119.pdb 1 MLAKRIIACLDVKDGRVVKGTNFENLRDSGD-PVELGKFYSEIG-IDELVFLDITASVEK 58 usage_00120.pdb 1 ---KRIIACLDVKDGRVV-----------GD-PVELGKFYSEIG-IDELVFLDITA---K 41 usage_00168.pdb 1 MLAKRIIACLDVKDGRVV-----------GD-PVELGKFYSEIG-IDELVFLDITASVEK 47 usage_00169.pdb 1 MLAKRIIACLDVKDGRVVK---------SGD-PVELGKFYSEIG-IDELVFLDITASVEK 49 usage_00269.pdb 1 --AKRIIACLDVKDGRVVKGTNFENLRDSGD-PVELGKFYSEIG-IDELVFLDIT----- 51 usage_00300.pdb 1 ALAKRIDAALIVKDGRVVKGSNFENLRDSGD-PVELGKFYSEIG-IDELSFWDITASVEK 58 usage_00301.pdb 1 --AKRIDAALIVKDGRVVKGSNFENLRDSGD-PVELGKFYSEIG-IDELSFWDITASVEK 56 usage_00302.pdb 1 ALAKRIDAALIVKDGRVVKGSNFENLRDSGD-PVELGKFYSEIG-IDELSFWDITASVEK 58 usage_00306.pdb 1 ---GKIVLIVDD-A-----------------TNGREAVEKYKELKPDIVTMDITM----- 34 krI a l v d pvelgkfyseig iDel f dit usage_00084.pdb 57 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 113 usage_00101.pdb 59 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 115 usage_00118.pdb 59 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 115 usage_00119.pdb 59 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 115 usage_00120.pdb 42 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 98 usage_00168.pdb 48 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 104 usage_00169.pdb 50 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 106 usage_00269.pdb 52 -K-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVSINTAAVENPSLITQ 107 usage_00300.pdb 59 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVEINTAAVENPSLITQ 115 usage_00301.pdb 57 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVEINTAAVENPSLITQ 113 usage_00302.pdb 59 RK-TMLELVEKVAEQIDIPFTVGGGIHD-F-ETASELILRGADKVEINTAAVENPSLITQ 115 usage_00306.pdb 35 PEMNGIDAIKEIMKIDPNAKIIVCS-AMGQQAMVIEAIKAGAKGFIVNTAAVENPSLITQ 93 k tmlelvekvaeqidipftvggg hd f etasElIlrGAdkv iNTAAVENPSLITQ usage_00084.pdb 114 IAQTFGSQAVVVAIDAKR 131 usage_00101.pdb 116 IAQTFGSQAVVVAIDAKR 133 usage_00118.pdb 116 IAQTFGSQAVVVAIDAKR 133 usage_00119.pdb 116 IAQTFGSQAVVVAIDAKR 133 usage_00120.pdb 99 IAQTFGSQAVVVAIDAKR 116 usage_00168.pdb 105 IAQTFGSQAVVVAIDAKR 122 usage_00169.pdb 107 IAQTFGSQAVVVAIDAKR 124 usage_00269.pdb 108 IAQTFGSQAVVVAIVAKR 125 usage_00300.pdb 116 IAQTFGSQAVVVYIAAKR 133 usage_00301.pdb 114 IAQTFGSQAVVVYIAAKR 131 usage_00302.pdb 116 IAQTFGSQAVVVYIAAKR 133 usage_00306.pdb 94 LAQTFGSQAVVVAIDAKR 111 iAQTFGSQAVVV I AKR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################