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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:50:00 2021
# Report_file: c_0209_17.html
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#====================================
# Aligned_structures: 17
#   1: usage_00008.pdb
#   2: usage_00049.pdb
#   3: usage_00050.pdb
#   4: usage_00051.pdb
#   5: usage_00052.pdb
#   6: usage_00053.pdb
#   7: usage_00054.pdb
#   8: usage_00055.pdb
#   9: usage_00080.pdb
#  10: usage_00096.pdb
#  11: usage_00107.pdb
#  12: usage_00108.pdb
#  13: usage_00109.pdb
#  14: usage_00194.pdb
#  15: usage_00224.pdb
#  16: usage_00388.pdb
#  17: usage_00417.pdb
#
# Length:        120
# Identity:       24/120 ( 20.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     75/120 ( 62.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           30/120 ( 25.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00049.pdb         1  ---MTQSPSSLSASVGDRVTITCRA-V----SS-AVAWYQQKPGKAPKLLIYSTSSLYSG   51
usage_00050.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00051.pdb         1  DIQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   57
usage_00052.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00053.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00054.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00055.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00080.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   56
usage_00096.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQDV--NT-AVAWYQQKPGKAPKLLIYSASFLYSG   56
usage_00107.pdb         1  -IQMTQSPSTLSASVGDRVTITCRASQSI--SS-WLAWYQQRPGKAPKLLIYKASSLESG   56
usage_00108.pdb         1  -IQMTQSPSSLSASVGDRVTITCKASQDV--SI-GVAWYQQKPGKAPKLLIYSASYRYTG   56
usage_00109.pdb         1  -IQMTQSPSSLSASVGDRVTITCKASQDV--SI-GVAWYQQKPGKAPKLLIYSASYRYTG   56
usage_00194.pdb         1  ---MIQPEKLLLVTVGKTATLHCTVTSLLP--VGPVLWFRGVGP-GRELIYNQKE----G   50
usage_00224.pdb         1  ---MTQSPSSLSASVGDRVTITCRA-V----SS-AVAWYQQKPGKAPKLLIYS-SSLYSG   50
usage_00388.pdb         1  ---MTQSPSSLSASVGDRVTITCRA-S---SS--AVAWYQQKPGKAPKLLIYSTSSLYSG   51
usage_00417.pdb         1  DIQMTQSPSSLSASVGDRVTITCRASQSV--SS-AVAWYQQKPGKAPKLLIYSASSLYSG   57
                              MtQsps LsasVGdrvTitC a          vaWyqq pg apkLliy  s    G

usage_00008.pdb        57  VPSRFSGSG------SGTDFTLTISSLQPEDFATYYCQQYSYSL--LTFGQGTKVEI---  105
usage_00049.pdb        52  VPSRFSGSR------S-TDFTLTISSLQPEDFATYYCQQSSPSFL-ITFGQGTKVEI---  100
usage_00050.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  107
usage_00051.pdb        58  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  108
usage_00052.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  107
usage_00053.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  107
usage_00054.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  107
usage_00055.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYPYYSSLITFGQGTKVEI---  107
usage_00080.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQYKYVP--VTFGQGTKVEI---  105
usage_00096.pdb        57  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQHYTTP--PTFGQGTKVEI---  105
usage_00107.pdb        57  VPSRFSGSG------SGTEFTLTISSLQPDDFATYYCQHYNSYSPGYTFGQGTKVEI---  107
usage_00108.pdb        57  VPSRFSGSG------SGTDFTLTISSLQPEDFATYYCQQYYIYP--YTFGQGTKVEI---  105
usage_00109.pdb        57  VPSRFSGSG------SGTDFTLTISSLQPEDFATYYCQQYYIYP--YTFGQGTKVEI---  105
usage_00194.pdb        51  HFPRVTTVSDLTKRN-NMDFSIRISSITPADVGTYYCVKFRKNVE-FKSGPGTEMAL---  105
usage_00224.pdb        51  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQSSPSFL-ITFGQGTKVEI---  100
usage_00388.pdb        52  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQSSPSFL-ITFGQGTKVEIKRT  104
usage_00417.pdb        58  VPSRFSGSR------SGTDFTLTISSLQPEDFATYYCQQSSSSL--ITFGQGTKVEI---  106
                           vpsRfsgs         tdFtltISSlqP DfaTYYCq         tfGqGTkvei   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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