################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:31 2021 # Report_file: c_0772_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00381.pdb # 2: usage_00423.pdb # 3: usage_00424.pdb # 4: usage_00489.pdb # 5: usage_00490.pdb # 6: usage_00550.pdb # 7: usage_00760.pdb # 8: usage_00775.pdb # 9: usage_00818.pdb # # Length: 87 # Identity: 42/ 87 ( 48.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 87 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 87 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00381.pdb 1 -VVSMNYRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 57 usage_00423.pdb 1 ------YRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 52 usage_00424.pdb 1 ------YRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 52 usage_00489.pdb 1 ------YRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 52 usage_00490.pdb 1 ------YRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 52 usage_00550.pdb 1 IVVSMNYRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 58 usage_00760.pdb 1 ------YRVGALGFLALPGNP--EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 52 usage_00775.pdb 1 VLINIQYRLGALGFLSLNS-EDLNVPGNAGLKDQVMALRWIKNNCANFGGNPDNITVFGE 59 usage_00818.pdb 1 VLINIQYRLGALGFLSLNS-EDLNVPGNAGLKDQVMALRWIKNNCANFGGNPDNITVFGE 59 YR GALGFL L PGN GL DQ AL W N A FGGNP T FGE usage_00381.pdb 58 SAGAASVSLHLLSPGSHSLFTRAILQ- 83 usage_00423.pdb 53 SAGAASVSLHLLSPGSHSLFTRAILQS 79 usage_00424.pdb 53 SAGAASVSLHLLSPGSHSLFTRAILQS 79 usage_00489.pdb 53 SAGAASVSLHLLSPGSHSLFTRAILQ- 78 usage_00490.pdb 53 SAGAASVSLHLLSPGSHSLFTRAILQ- 78 usage_00550.pdb 59 SAGAASVSLHLLSPGSHSLFTRAILQS 85 usage_00760.pdb 53 SAGAASVSLHLLSPGSHSLFTRAILQ- 78 usage_00775.pdb 60 SAGAASTHYMMLTEQTRGLFHRGILM- 85 usage_00818.pdb 60 SAGAASTHYMMLTEQTRGLFHRGILMS 86 SAGAAS L LF R IL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################