################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:27 2021 # Report_file: c_1261_424.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00076.pdb # 2: usage_00112.pdb # 3: usage_00117.pdb # 4: usage_00474.pdb # 5: usage_00648.pdb # 6: usage_00815.pdb # 7: usage_01219.pdb # 8: usage_01275.pdb # 9: usage_01351.pdb # 10: usage_01365.pdb # 11: usage_01598.pdb # 12: usage_01626.pdb # 13: usage_01925.pdb # 14: usage_01931.pdb # 15: usage_02435.pdb # 16: usage_03515.pdb # 17: usage_03516.pdb # 18: usage_03896.pdb # 19: usage_04293.pdb # 20: usage_04773.pdb # # Length: 51 # Identity: 23/ 51 ( 45.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 51 ( 76.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 51 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 44 usage_00112.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKPAPG 49 usage_00117.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKPAPG 49 usage_00474.pdb 1 --DVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGA----- 44 usage_00648.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGG----- 44 usage_00815.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_01219.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPG 49 usage_01275.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_01351.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPG 49 usage_01365.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPG 49 usage_01598.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_01626.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPG 49 usage_01925.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_01931.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_02435.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_03515.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_03516.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_03896.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 usage_04293.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPG 49 usage_04773.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG----- 46 DVQvKRiHEYKRQLlNcLhVitlYnRIKk p k vpRTV iGg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################