################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:21 2021 # Report_file: c_0962_109.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00102.pdb # 2: usage_00238.pdb # 3: usage_00263.pdb # 4: usage_00264.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00329.pdb # 8: usage_00840.pdb # 9: usage_00841.pdb # 10: usage_00842.pdb # 11: usage_00940.pdb # 12: usage_00971.pdb # 13: usage_01046.pdb # 14: usage_01141.pdb # 15: usage_01491.pdb # # Length: 32 # Identity: 4/ 32 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 32 ( 40.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 32 ( 34.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 --QV--VMAEAVGIDKDKPKEAVTVAVKM--- 25 usage_00238.pdb 1 -GQV--VLAEAIGLDKDKPNRVTKVAVKM-L- 27 usage_00263.pdb 1 FGQV--VMAEAVGIDKDKPKEAVTVAVKM--- 27 usage_00264.pdb 1 --QV--VMAEAVGIDKDKPKEAVTVAVKM--- 25 usage_00265.pdb 1 -GQV--VMAEAVGIDKDKPKEAVTVAVKM--- 26 usage_00266.pdb 1 -GQV--VMAEAVGID--KPKEAVTVAVKM--- 24 usage_00329.pdb 1 -GQV--VLAEAIGL----PNRVTKVAVKM--- 22 usage_00840.pdb 1 -GQV--VLAEAIGLDKDKPNRVTKVAVKM-L- 27 usage_00841.pdb 1 -GQV--VLAEAIGLDKDKPNRVTKVAVKM--- 26 usage_00842.pdb 1 -GQV--VLAEAIGLDKDKPNRVTKVAVKM-L- 27 usage_00940.pdb 1 -GQV--VRAEAFGMDPARPDQASTVAVKM--- 26 usage_00971.pdb 1 -GDIYEPNAEATDA----ENNPVKVGNIIMKF 27 usage_01046.pdb 1 -GQV--VRAEAFGMDPARPDQASTVAVKM--- 26 usage_01141.pdb 1 -GQV--VLAEAIGLDKDKPNRVTKVAVKM--- 26 usage_01491.pdb 1 --QV--VRAEAFGMDPARPDQASTVAVKM-L- 26 qv v AEA g p Vavkm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################