################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:41 2021 # Report_file: c_1434_364.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00379.pdb # 2: usage_00380.pdb # 3: usage_00540.pdb # 4: usage_00541.pdb # 5: usage_02442.pdb # 6: usage_02674.pdb # 7: usage_02675.pdb # 8: usage_02835.pdb # 9: usage_02886.pdb # 10: usage_02887.pdb # 11: usage_02888.pdb # 12: usage_02889.pdb # 13: usage_02921.pdb # 14: usage_03169.pdb # 15: usage_03170.pdb # # Length: 97 # Identity: 55/ 97 ( 56.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 97 ( 57.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 97 ( 42.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00379.pdb 1 --------------NAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 46 usage_00380.pdb 1 --------------NAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 46 usage_00540.pdb 1 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 60 usage_00541.pdb 1 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 60 usage_02442.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 45 usage_02674.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 45 usage_02675.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQV--------D-DKTAIES 36 usage_02835.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 45 usage_02886.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 45 usage_02887.pdb 1 ------------------DRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 42 usage_02888.pdb 1 ------------------DRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 42 usage_02889.pdb 1 ---------------AEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 45 usage_02921.pdb 1 -----------------ADRKFEELVQTRNQGDHLLHSTRKQV------LPADDKTAIES 37 usage_03169.pdb 1 -EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 59 usage_03170.pdb 1 -EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 59 DRKFEELVQTRNQGDHLLHSTRKQV a DKTAIES usage_00379.pdb 47 ALTALETALKGEDKAAIEAKMQELAQ----------- 72 usage_00380.pdb 47 ALTALETALKGEDKAAIEAKMQE-------------- 69 usage_00540.pdb 61 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 97 usage_00541.pdb 61 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 97 usage_02442.pdb 46 ALTALETALKGEDKAAIEAKMQELAQVS--------- 73 usage_02674.pdb 46 ALTALETALKGEDKAAIEAKMQELAQVS--------- 73 usage_02675.pdb 37 ALTALETALKGEDKAAIEAKMQELAQVS--------- 64 usage_02835.pdb 46 ALTALETALKGEDKAAIEAKMQELAQVS--------- 73 usage_02886.pdb 46 ALTALETALKGEDKAAIEAKMQELAQVS--------- 73 usage_02887.pdb 43 ALTALETALKGEDKAAIEAKMQELAQV---------- 69 usage_02888.pdb 43 ALTALETALKGEDKAAIEAKMQELAQVS--------- 70 usage_02889.pdb 46 ALTALETALKGEDKAAIEAKMQELAQVS--------- 73 usage_02921.pdb 38 ALTALETALKGEDKAAIEAKMQELAQVSQKL------ 68 usage_03169.pdb 60 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 96 usage_03170.pdb 60 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 96 ALTALETALKGEDKAAIEAKMQE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################