################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:05 2021 # Report_file: c_1023_54.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00236.pdb # 2: usage_00237.pdb # 3: usage_00238.pdb # 4: usage_00239.pdb # 5: usage_00337.pdb # 6: usage_00338.pdb # 7: usage_00403.pdb # 8: usage_00636.pdb # 9: usage_00637.pdb # 10: usage_00638.pdb # 11: usage_00660.pdb # 12: usage_00882.pdb # 13: usage_01092.pdb # 14: usage_01093.pdb # 15: usage_01371.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 58 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 58 ( 51.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKRS 47 usage_00237.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKRS 47 usage_00238.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVK-- 45 usage_00239.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKRS 47 usage_00337.pdb 1 -PLIS--AG-DTVTEAD-AI-AARQG-----GLGIIHKN-S---IEQQAEQVDKVKRS 43 usage_00338.pdb 1 -PLIS--AG-DTVTEAD-AI-AARQG-----GLGIIHKN-S---IEQQAEQVDKVKRS 43 usage_00403.pdb 1 DLLVC--NCA----PAVAVGNMAATLKEGGFLLLHTL--LS---QDQWESLFAGAS-- 45 usage_00636.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKRS 47 usage_00637.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKR- 46 usage_00638.pdb 1 -PLIS--AGMDTVTEADMAIAMARQG-----GLGIIHKNMS---IEQQAEQVDKVKRS 47 usage_00660.pdb 1 -PLVS--AAMDTVTEAALAKALAREG-----GIGIIHKNLT---PDEQARQVSIVKKT 47 usage_00882.pdb 1 -PIIT--AA-DTVTGSK-AIAIARAG-----GLGVIHKN-S---ITEQAEEVRKVKRS 44 usage_01092.pdb 1 -PLVS--AAMDTVTEARLAIAMAQEG-----GIGIIHKNMG---IEQQAAEVRKVK-- 45 usage_01093.pdb 1 -PLVS--AAMDTVTEARLAIAMAQEG-----GIGIIHKNMG---IEQQAAEVRKVKKH 47 usage_01371.pdb 1 -----PVSASDTVTEARLAIALAQEG-----GIGFIHKNSIEQQAAQVHQVKI----- 43 a a A g g g ih #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################