################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:07 2021 # Report_file: c_0039_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00029.pdb # 5: usage_00064.pdb # 6: usage_00086.pdb # # Length: 284 # Identity: 49/284 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 227/284 ( 79.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/284 ( 20.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PEFGRCTQELLFG--KGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSN 56 usage_00012.pdb 1 IPEFGRCTQELLFG--KGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSN 57 usage_00013.pdb 1 IPEFGRCTQELLFG--KGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSN 57 usage_00029.pdb 1 ------------------SALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSN 41 usage_00064.pdb 1 IEELRDLWQQKMLRDNPELSID-N-MSRPIVTNALTHGLSLVGDLFV---NQDDTILLPE 55 usage_00086.pdb 1 IPEFGRCTQELLFG--KGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSN 57 sali d raRtaqTpggTgaLrvaaDfla sv krvwvsn usage_00001.pdb 57 PSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPT 114 usage_00012.pdb 58 PSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPT 115 usage_00013.pdb 58 PSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPT 115 usage_00029.pdb 42 PSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPT 99 usage_00064.pdb 56 HNWGNYKLVFNTRNGANLQTYPIFD-KDGHYTTDSLVEALQSYNKDKVIMILN-YPNNPT 113 usage_00086.pdb 58 PSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPT 115 psWpNhKsVFNsa GlevreYayyD enhtldfDaLinsLneaq agdvvlfh cchNPT usage_00001.pdb 115 GIDPTLEQWQTLAQLSVEKG-----WLPLFDFAYQGFARGLEEDA-------EGLRAFAA 162 usage_00012.pdb 116 GIDPTLEQWQTLAQLSVEKG-----WLPLFAFAYQGFARGLEEDA-------EGLRAFAA 163 usage_00013.pdb 116 GIDPTLEQWQTLAQLSVEKG-----WLPLFDFAFQGFARGLEEDA-------EGLRAFAA 163 usage_00029.pdb 100 GIDPTLEQWQTLAQLSVEKG-----WLPLFDFAYQGFARGLEEDA-------EGLRAFAA 147 usage_00064.pdb 114 GYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLF-------YEDVYTQSLFTALTN 166 usage_00086.pdb 116 GIDPTLEQWQTLAQLSVEKG-----WLPLFDFAYQGFARGLEEDA-------EGLRAFAA 163 GidPTleqwqTlaqlsvekg wlplfdfAyqGfa eglrAfaa usage_00001.pdb 163 MH---KELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIDANYSNPPAHG 219 usage_00012.pdb 164 MH---KELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHG 220 usage_00013.pdb 164 MH---KELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHG 220 usage_00029.pdb 148 MH---KELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHG 204 usage_00064.pdb 167 LHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPT 226 usage_00086.pdb 164 MH---KELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHG 220 mH kelIvassysKnFglyneRVGacTlvaaDseTvdrafsqmKaaIraNySnpPahg usage_00001.pdb 220 ASVVATILSN-DALRAIWEQELTDMRQRIQRMRQLFVNTLQE-- 260 usage_00012.pdb 221 ASVVATILSN-DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 263 usage_00013.pdb 221 ASVVATILSN-DALRAIWEQELTDMRQRIQRMRQLFVNTLQEK- 262 usage_00029.pdb 205 ASVVATILSN-DALRAIWEQELTDMRQRIQRMRQLFVNTLQE-- 245 usage_00064.pdb 227 QSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYA------ 264 usage_00086.pdb 221 ASVVATILSN-DALRAIWEQELTDMRQRIQRMRQLFVNTLQEK- 262 aSvVatiLsN dalraiwEQeltdmrqRiqrmrqlfvn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################