################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:30 2021 # Report_file: c_1258_53.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00471.pdb # 2: usage_00472.pdb # 3: usage_00562.pdb # 4: usage_00563.pdb # 5: usage_00969.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 47 ( 6.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 47 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00471.pdb 1 NFK-LQTKLFDGSGEEIKTDSQVSNIIQAK-------LKISVHD--- 36 usage_00472.pdb 1 NFK-LQTKLFDGSGEEIKTDSQVSNIIQAK-------LKISVHD--- 36 usage_00562.pdb 1 TIQ-IKYLDEENEEVSINSQGEYEEALKMAVKQGNQ-LQMQVHE--- 42 usage_00563.pdb 1 NFK-LQTKLFDGSGEEIKTDSQVSNIIQAK-------LKISVHD--- 36 usage_00969.pdb 1 IRVEAR-----------LDAERIRQLETEAGERG-KAEYSLELQLTD 35 l vh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################