################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:59 2021 # Report_file: c_0110_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00124.pdb # 2: usage_00125.pdb # 3: usage_00126.pdb # 4: usage_00127.pdb # 5: usage_00128.pdb # 6: usage_00129.pdb # 7: usage_00130.pdb # # Length: 207 # Identity: 141/207 ( 68.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 141/207 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/207 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00124.pdb 1 -PRLRQLGVQLTRPDGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 59 usage_00125.pdb 1 ------------------TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 42 usage_00126.pdb 1 RPRLRQLGVQL------MTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 54 usage_00127.pdb 1 ------------------TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 42 usage_00128.pdb 1 ------------------TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 42 usage_00129.pdb 1 RPRLRQLGVQL-TRG-SMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 58 usage_00130.pdb 1 ------------------TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW 42 TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPW usage_00124.pdb 60 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 119 usage_00125.pdb 43 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 102 usage_00126.pdb 55 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 114 usage_00127.pdb 43 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 102 usage_00128.pdb 43 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 102 usage_00129.pdb 59 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 118 usage_00130.pdb 43 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP 102 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYP usage_00124.pdb 120 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTTMG 179 usage_00125.pdb 103 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTTMG 162 usage_00126.pdb 115 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTTMG 174 usage_00127.pdb 103 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF--------------------- 141 usage_00128.pdb 103 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF--------------------- 141 usage_00129.pdb 119 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTTMG 178 usage_00130.pdb 103 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF--------------------- 141 TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF usage_00124.pdb 180 VGAHRCVGAGLARMEVIVFLREWLGG- 205 usage_00125.pdb 163 VGAHRCVGAGLARMEVIVFLREWLGGM 189 usage_00126.pdb 175 VGAHRCVGAGLARMEVIVFLREWLGG- 200 usage_00127.pdb --------------------------- usage_00128.pdb --------------------------- usage_00129.pdb 179 VGAHRCVGAGLARMEVIVFLREWLGG- 204 usage_00130.pdb --------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################