################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:10 2021 # Report_file: c_0958_20.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00068.pdb # 2: usage_00142.pdb # 3: usage_00143.pdb # 4: usage_00210.pdb # 5: usage_00759.pdb # 6: usage_00882.pdb # 7: usage_00898.pdb # 8: usage_00899.pdb # 9: usage_00934.pdb # 10: usage_00937.pdb # 11: usage_01117.pdb # 12: usage_01122.pdb # 13: usage_01182.pdb # 14: usage_01229.pdb # 15: usage_01250.pdb # 16: usage_01256.pdb # 17: usage_01285.pdb # 18: usage_01301.pdb # 19: usage_01307.pdb # 20: usage_01368.pdb # # Length: 72 # Identity: 61/ 72 ( 84.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 72 ( 84.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 72 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 -GALLNLQIYC---QLLYYVNLLLIDHRFLLRRGEYVLHMWQIS--FNADKLTSATNPDK 54 usage_00142.pdb 1 --ALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 53 usage_00143.pdb 1 KGALLNLQIYC---RLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 56 usage_00210.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_00759.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_00882.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_00898.pdb 1 -GALLNLQIYC---RLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 55 usage_00899.pdb 1 ----LNLQIYC---RLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 52 usage_00934.pdb 1 ----LNLQIYC--VQLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 53 usage_00937.pdb 1 --ALLNLQIYC-GVQLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 56 usage_01117.pdb 1 ----LNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 51 usage_01122.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS--FNADKLTSATNPDK 53 usage_01182.pdb 1 --ALLNLQIYCGKVQLLYYVNLLLIDHRFLLRRGEYVLHMWQISS-FNADKLTSATNPDK 57 usage_01229.pdb 1 -GALLNLQIYC--VQLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 56 usage_01250.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_01256.pdb 1 --ALLNLQIYCGKVQLLYYVNLLLIDHRFLLRRGEYVLHMWQISS-FNADKLTSATNPDK 57 usage_01285.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_01301.pdb 1 -GALLNLQIYC-KVRLLYYVNLLLIDHRFLLRRGEYVLHMWQIS--FNADKLTSATNPDK 56 usage_01307.pdb 1 -GALLNLQIYC----LLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 54 usage_01368.pdb 1 -GALLNLQIYC---RLLYYVNLLLIDHRFLLRRGEYVLHMWQIS-GFNADKLTSATNPDK 55 LNLQIYC LLYYVNLLLIDHRFLLRRGEYVLHMWQIS FNADKLTSATNPDK usage_00068.pdb 55 ENSMSISILLD- 65 usage_00142.pdb 54 ENSMSISILLDN 65 usage_00143.pdb 57 ENSMSISILLDN 68 usage_00210.pdb 55 ENSMSISILLDN 66 usage_00759.pdb 55 ENSMSISILLDN 66 usage_00882.pdb 55 ENSMSISILLDN 66 usage_00898.pdb 56 ENSMSISILLDN 67 usage_00899.pdb 53 ENSMSISILLDN 64 usage_00934.pdb 54 ENSMSISILLD- 64 usage_00937.pdb 57 ENSMSISILLDN 68 usage_01117.pdb 52 ENSMSISILLDN 63 usage_01122.pdb 54 ENSMSISILLD- 64 usage_01182.pdb 58 ENSMSISILLDN 69 usage_01229.pdb 57 ENSMSISILLD- 67 usage_01250.pdb 55 ENSMSISILLDN 66 usage_01256.pdb 58 ENSMSISILLDN 69 usage_01285.pdb 55 ENSMSISILLDN 66 usage_01301.pdb 57 ENSMSISILLDN 68 usage_01307.pdb 55 ENSMSISILLDN 66 usage_01368.pdb 56 ENSMSISILLDN 67 ENSMSISILLD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################