################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:47 2021 # Report_file: c_0553_35.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00211.pdb # 2: usage_00678.pdb # 3: usage_00752.pdb # 4: usage_01120.pdb # 5: usage_01135.pdb # 6: usage_01136.pdb # 7: usage_01308.pdb # 8: usage_01309.pdb # 9: usage_01420.pdb # 10: usage_01695.pdb # 11: usage_02140.pdb # # Length: 87 # Identity: 8/ 87 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 87 ( 18.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 87 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00211.pdb 1 CGWEPSTETVIPRDGGLLLRDTPALMLADGGH-LSCFMETTYKSKKE-VK---LPELHFH 55 usage_00678.pdb 1 QGWEPSSERLFARGGMLIGNNFMALKLEGGGH-YLCEFKTTYKAKKP-VK---MPGYHYV 55 usage_00752.pdb 1 LKWEPSTEKMYVRDGVLTGDITMALLLEGNAHY--RDSRTTYKAKEKGVK---LPGYHLV 55 usage_01120.pdb 1 VKWEPSTEKLYVRDGVLKGDVNMALLLEGGGH-YRCDFKTTYKAKKV-VQ---LPDYHFV 55 usage_01135.pdb 1 VDWEPSTEKITASDGVLKGDVTMYLKLEGGGN-HKCQFKTTYKAAKKILK---MPGSHYI 56 usage_01136.pdb 1 VDWEPSTEKITASDGVLKGDVTMYLKLEGGGN-HKCQFKTTYKAAKKILK---MPGSHYI 56 usage_01308.pdb 1 MGWEASTERLYPRDGVLKGEIHKALKLKDGGH-YLVEFKSIYMAKKP-VQ---LPGYYYV 55 usage_01309.pdb 1 MGWEASTERLYPRDGVLKGEIHKALKLKDGGH-YLVEFKSIYMAKKP-VQ---LPGYYYV 55 usage_01420.pdb 1 LKWEPSTEKLHVRDGLLVGNINMALLLEGGGH-YLCDFKTTYKAKKV-VQ---LPDYHFV 55 usage_01695.pdb 1 LGWEANTEMLYPADSGLRGHNQMALKLVGGGY-LHCSLKTTYRSKKP-AKNLKMPGFYFV 58 usage_02140.pdb 1 TGWDPSFEKMTVCDGILKGDVTAFLMLQGGGN-YRCQFHTSYKTKKP-VT---MPPNHVV 55 We s E dg L g L L gg Y k P usage_00211.pdb 56 HLRMEKLNISDDWKTVEQHESVVAS-- 80 usage_00678.pdb 56 DRKLDVTNHNKDYTSVEQCEISIA--- 79 usage_00752.pdb 56 DHCIEILSHDKDYNKVKLYEHAVA--- 79 usage_01120.pdb 56 DHRIEIKSHDKDYNNVNLHEHAEAHSG 82 usage_01135.pdb 57 SHRLVRKT-E--GNITELVEDAVA--- 77 usage_01136.pdb 57 SHRLVRKT-E--GNITELVEDAVA--- 77 usage_01308.pdb 56 DSKLDITSHNEDYTIVEQYERTEG--- 79 usage_01309.pdb 56 DSKLDITSHNEDYTIVEQYERTEG--- 79 usage_01420.pdb 56 DHRIEILSNDSDYNKVKLYEHGVA--- 79 usage_01695.pdb 59 DRKLERIKEADKETYVEQHEMAV---- 81 usage_02140.pdb 56 ETRIARTDLDKGGNSVQLTEHAVA--- 79 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################