################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:42 2021 # Report_file: c_0788_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00116.pdb # # Length: 101 # Identity: 18/101 ( 17.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/101 ( 68.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/101 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 GCVIYIN----------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGP------- 43 usage_00009.pdb 1 GCVIYIN----------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG-------- 42 usage_00010.pdb 1 GCVIYIN---------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG-------- 43 usage_00011.pdb 1 GCVIYIN---------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG-------- 43 usage_00012.pdb 1 GCVIYIN----------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGP------- 43 usage_00116.pdb 1 GLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIENP--DVRFFELRPGAVDTYFGG 58 Gcviyin ntiYaasKhAlRgLadaFrkEea giRvstvsPG usage_00008.pdb 44 TRPEI------YIEPKEIANAIRFVIDAGETTQITNVDVRP 78 usage_00009.pdb 43 ------------IEPKEIANAIRFVIDAGETTQITNVDVRP 71 usage_00010.pdb 44 ------------IEPKEIANAIRFVIDAGETTQITNVDVRP 72 usage_00011.pdb 44 ------------IEPKEIANAIRFVIDAGETTQITNVDVRP 72 usage_00012.pdb 44 TRPEI------YIEPKEIANAIRFVIDAGETTQITNVDVRP 78 usage_00116.pdb 59 -SKPGKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRS 98 iePkEIAnAiRfvidagettqitnvdvRp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################