################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:39 2021 # Report_file: c_1105_62.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00203.pdb # 2: usage_00204.pdb # 3: usage_00260.pdb # 4: usage_00261.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00407.pdb # 8: usage_00408.pdb # 9: usage_00415.pdb # 10: usage_00416.pdb # 11: usage_00432.pdb # 12: usage_00790.pdb # # Length: 78 # Identity: 44/ 78 ( 56.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 78 ( 56.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 78 ( 2.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00203.pdb 1 EHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFKKRDHLQ 60 usage_00204.pdb 1 EHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFKKRDHLQ 60 usage_00260.pdb 1 DPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQ 60 usage_00261.pdb 1 DPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQ 60 usage_00262.pdb 1 -PQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQ 59 usage_00263.pdb 1 --QELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQ 58 usage_00407.pdb 1 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ 60 usage_00408.pdb 1 -PQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ 59 usage_00415.pdb 1 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ 60 usage_00416.pdb 1 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ 60 usage_00432.pdb 1 -HHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQ 59 usage_00790.pdb 1 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ 60 EL A MG RL PQ I KRYS G I FDDY ACCVKLRALTD F RD Q usage_00203.pdb 61 QGSADFIYDDFLQGTMAI 78 usage_00204.pdb 61 QGSADFIYDDFLQGTMAI 78 usage_00260.pdb 61 QGMVNFSYDDFIQCVMTV 78 usage_00261.pdb 61 QGMVNFSYDDFIQCVMTV 78 usage_00262.pdb 60 QGMVNFSYDDFIQCVMTV 77 usage_00263.pdb 59 QGMVNFSYDDFIQCVMTV 76 usage_00407.pdb 61 QGVVNFPYDDFIQCVMSV 78 usage_00408.pdb 60 QGVVNFPYDDFIQCVMSV 77 usage_00415.pdb 61 QGVVNFPYDDFIQCVMSV 78 usage_00416.pdb 61 QGVVNFPYDDFIQCVMSV 78 usage_00432.pdb 60 QGSANFIYDDFLQGTMAI 77 usage_00790.pdb 61 QGVVNFPYDDFIQCVMSV 78 QG F YDDF Q M #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################