################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:43 2021 # Report_file: c_1153_34.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00362.pdb # 2: usage_00363.pdb # 3: usage_00368.pdb # 4: usage_00400.pdb # 5: usage_00404.pdb # 6: usage_00405.pdb # 7: usage_00406.pdb # 8: usage_00603.pdb # 9: usage_01551.pdb # 10: usage_01553.pdb # 11: usage_01556.pdb # 12: usage_01558.pdb # 13: usage_01568.pdb # 14: usage_01842.pdb # 15: usage_02263.pdb # # Length: 41 # Identity: 11/ 41 ( 26.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 41 ( 51.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 41 ( 41.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00362.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRNF---------LQTD 31 usage_00363.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRNF---------LQTD 31 usage_00368.pdb 1 VVLAIGN--G---QTITQGIISATGF-L---------QTD- 25 usage_00400.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_00404.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_00405.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_00406.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_00603.pdb 1 YVVAIGNP-F--GQSATFGIVSALNF-----------IQTD 27 usage_01551.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIG------QNFLQTD 34 usage_01553.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIN--------FLQTD 32 usage_01556.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_01558.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIN--------FLQTD 32 usage_01568.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIG------QNFLQTD 34 usage_01842.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 usage_02263.pdb 1 VVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTD 40 vVlAIGN QtiTqGIiSAtg qt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################