################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:13 2021 # Report_file: c_1226_96.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00168.pdb # 2: usage_00172.pdb # 3: usage_00300.pdb # 4: usage_00952.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 45 ( 48.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 45 ( 42.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00168.pdb 1 RPMVQVDGGRFATS--------DLNDLYRRLINRNNRLKKLLAQ- 36 usage_00172.pdb 1 RPMVQVDGGRFATS--------DLNDLYRRLINRNNRLKKLLAQG 37 usage_00300.pdb 1 -PLVPLDGGRFATS--------DLNDLYRRVINRNNRLKRLLDLA 36 usage_00952.pdb 1 PLIIDE-GRFQASWRGKMLDLTPAEFRLLKTLSHEP--------- 35 p v GgrfAts dlndlyrr inrnn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################