################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:47 2021 # Report_file: c_0863_100.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00097.pdb # 4: usage_00272.pdb # 5: usage_00315.pdb # 6: usage_00365.pdb # 7: usage_00430.pdb # 8: usage_00472.pdb # 9: usage_00514.pdb # 10: usage_00589.pdb # 11: usage_00599.pdb # 12: usage_00694.pdb # 13: usage_00709.pdb # 14: usage_00727.pdb # 15: usage_01122.pdb # 16: usage_01403.pdb # # Length: 74 # Identity: 55/ 74 ( 74.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 74 ( 77.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 74 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 ------YTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 54 usage_00062.pdb 1 ------YTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 54 usage_00097.pdb 1 ----GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 56 usage_00272.pdb 1 ------YTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 54 usage_00315.pdb 1 NYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 60 usage_00365.pdb 1 ----GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 56 usage_00430.pdb 1 -------TIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDY 53 usage_00472.pdb 1 -------TIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDY 53 usage_00514.pdb 1 ------YTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDY 54 usage_00589.pdb 1 --ARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDY 58 usage_00599.pdb 1 --ARGHYTIGKEIIDLVLDRIRKLADQC-GLQGFSVFHSFGGGTGSGFTSLLMERLSVDY 57 usage_00694.pdb 1 NYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 60 usage_00709.pdb 1 -------TIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 53 usage_00727.pdb 1 ----GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 56 usage_01122.pdb 1 ----GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 56 usage_01403.pdb 1 ------YTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 54 TIGKEIIDLVLDRIRKLADQC GLQGF VFHSFGGGTGSGFTSLLMERLSVDY usage_00061.pdb 55 GKKSKLEFSIYPA- 67 usage_00062.pdb 55 GKKSKLEFSIYPA- 67 usage_00097.pdb 57 GKKSKLE------- 63 usage_00272.pdb 55 GKKSKLEFSIYPAP 68 usage_00315.pdb 61 GKKSKLE------- 67 usage_00365.pdb 57 GKKSKLE------- 63 usage_00430.pdb 54 GKKSKLEFSIYPAP 67 usage_00472.pdb 54 GKKSKLEFSIYPAP 67 usage_00514.pdb 55 GKKSKLEFS----- 63 usage_00589.pdb 59 GKKSKLEFS----- 67 usage_00599.pdb 58 KKS-KLEFSI---- 66 usage_00694.pdb 61 GKKSKLE------- 67 usage_00709.pdb 54 GKKSKLE------- 60 usage_00727.pdb 57 GKKSKLEFSIYPA- 69 usage_01122.pdb 57 GKKSKLE------- 63 usage_01403.pdb 55 GKKSKLEFSIYPAP 68 gKk KLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################