################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:48 2021 # Report_file: c_1218_53.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00102.pdb # 2: usage_00103.pdb # 3: usage_00583.pdb # 4: usage_00584.pdb # 5: usage_00702.pdb # 6: usage_00854.pdb # 7: usage_00904.pdb # # Length: 76 # Identity: 5/ 76 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 76 ( 15.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 76 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 LLIDQQGYIQVTDFGFAKRVKGRTWL---------CGTPEYLAPEIILS-----KGYNKA 46 usage_00103.pdb 1 FFINESMELKVGDFGLAARLEPL---E-HRRRTI-CGTPNYLSPEVLNK-----QGHGAE 50 usage_00583.pdb 1 ILLDRSGNIKLCDFG----ISGQ---------------------------------YDVR 23 usage_00584.pdb 1 VLMTLEGDIRLAD------FGVS---A---------GTPYWMAPEVVM--------YDYK 34 usage_00702.pdb 1 LLIDQQGYIQVTDFGFAKRVKGRTWL---------CGTPEYLAPEIILS-----KGYNKA 46 usage_00854.pdb 1 LLIDQQGYIQVTDFGFAKRVKGRTWL---------CGTPEYLAPEIILS-----KGYNKA 46 usage_00904.pdb 1 ILFTLDGDIKLAD------FGVS---AKN-----FIGTPYWMAPEVVMCETSKDRPYDYK 46 l g i D y usage_00102.pdb 47 VDWWALGVLIYEMAAG 62 usage_00103.pdb 51 SDIWALGCVMYTMLL- 65 usage_00583.pdb 24 SDVWSLGITLYELATG 39 usage_00584.pdb 35 ADIWSLGITLIEMAQ- 49 usage_00702.pdb 47 VDWWALGVLIYEMAAG 62 usage_00854.pdb 47 VDWWALGVLIYEMAAG 62 usage_00904.pdb 47 ADVWSLGITLIEMAE- 61 D W LG ema #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################