################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:53 2021 # Report_file: c_0393_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00022.pdb # 4: usage_00040.pdb # 5: usage_00042.pdb # 6: usage_00083.pdb # # Length: 100 # Identity: 1/100 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/100 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/100 ( 42.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----RSMTVYEGESARFSCDTDG-EPVPTVTWLRKGQV----LSTSA-RHQVTTTK--- 46 usage_00002.pdb 1 -----RSMTVYEGESARFSCDTDG-EPVPTVTWLRKGQV----LSTSA-RHQVTTTK--- 46 usage_00022.pdb 1 -V-EVESFLVHPGDLLQLRCRLRDDV--QSINWLR----DGVQLAESN-RTRITG----- 46 usage_00040.pdb 1 ---PLYGVEVFVGETAHFEIELSE-P-DVHGQWKL----KGQPLTASP-DCEIIEDG--- 47 usage_00042.pdb 1 T--KPRSMTVYEGESARFSCDTDG-EPVPTVTWLRKGQV----LSTSA-RHQVTTTK--- 49 usage_00083.pdb 1 -EVTYFPGKN---RTAVCEAM-AG-KPAAQISWTP-----D-------GDCVTKSESHSN 42 v a W usage_00001.pdb 47 --YKSTFEISSVQASDEGNYSVVVENSEGKQEAEFT---- 80 usage_00002.pdb 47 --YKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 84 usage_00022.pdb 47 --EEVEVQD--SVPADSGLYACVTSSPSGSDTTYFSVNVS 82 usage_00040.pdb 48 --KKHILILHNCQLGMTG--EVSFQAANAKSAANLK---- 79 usage_00042.pdb 50 --YKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 87 usage_00083.pdb 43 GTVTVRSTCHWEQN-NVSVVSCLVSHSTGNQSLSIELS-- 79 q g g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################