################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:39 2021 # Report_file: c_1331_40.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00198.pdb # 2: usage_00204.pdb # 3: usage_00270.pdb # 4: usage_00296.pdb # 5: usage_00297.pdb # 6: usage_00524.pdb # # Length: 104 # Identity: 7/104 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/104 ( 14.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/104 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00198.pdb 1 TEADRIKMDELAHAVVFTSQGVPFMQGGEEMLRTKGGNDNSYNAGDSV-NQFDWS----- 54 usage_00204.pdb 1 -----IASVELSTLLLLTFPGAPSIYYGDEVGLPGGI-------D-----RGFPL----- 38 usage_00270.pdb 1 -----LWKTYLALIFQMTYVGTPTIYYGDEYGMQGGA-------DPDNRRSFDWS----- 43 usage_00296.pdb 1 -----RNKARVAASIYLTLPGNPFIYYGEEIGMRGQGP------HEVIREPFQWYNGSGE 49 usage_00297.pdb 1 ----NEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGAT-------DPDCKRPMIWE----- 44 usage_00524.pdb 1 ----DKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGGH-------DPGCRKCMEWD----- 44 la T G P iyyG E g g w usage_00198.pdb 55 -----------R-KA-QF---------KDVFDYFSSMIHLRNQ- 75 usage_00204.pdb 39 -----------E-N--WN---------QEIFNTHRQLITIRQT- 58 usage_00270.pdb 44 -----------Q-ATPS----------NSAVALTQKLITIRNQ- 64 usage_00296.pdb 50 GETYWEPAMYN-DG--FTSVEQEEKNLDSLLNHYRRLIHFRNEN 90 usage_00297.pdb 45 -----------EKE--QN---------RGLFEFYKELIRLRHR- 65 usage_00524.pdb 45 -----------ETK--HD---------KDLFAFYQTVIRLRQAH 66 I R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################