################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:32 2021 # Report_file: c_0545_83.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00049.pdb # 2: usage_00118.pdb # 3: usage_00119.pdb # 4: usage_00162.pdb # 5: usage_00206.pdb # 6: usage_00809.pdb # 7: usage_00810.pdb # # Length: 134 # Identity: 40/134 ( 29.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/134 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/134 ( 10.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -GKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRE 59 usage_00118.pdb 1 --KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYIVNQAAVYFEKGDYNKCRE 58 usage_00119.pdb 1 ---QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYIVNQAAVYFEKGDYNKCRE 57 usage_00162.pdb 1 ---QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRE 57 usage_00206.pdb 1 -GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELHK-DITYLNNRAAAEYEKGEYETAIS 58 usage_00809.pdb 1 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQ 60 usage_00810.pdb 1 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQ 60 A EK lGN aYK kdF A HYdKA ELdp n T N AAvyfE c usage_00049.pdb 60 LCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQ 119 usage_00118.pdb 59 LCEKAIEVGRENREDYRMIAYAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPKVLKKCQ 118 usage_00119.pdb 58 LCEKAIEVGRENREDYRMIAYAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPKVLKKCQ 117 usage_00162.pdb 58 LCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQ 117 usage_00206.pdb 59 TLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLR 118 usage_00809.pdb 61 FCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVK 120 usage_00810.pdb 61 FCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVK 120 cekA EvGRE R DY Ia a R GN K a SL E R p kK usage_00049.pdb 120 QAEKILKEQ----- 128 usage_00118.pdb 119 QAEKIL-------- 124 usage_00119.pdb 118 QAEKILKEQ----- 126 usage_00162.pdb 118 QAEKILKEQ----- 126 usage_00206.pdb 119 NAEKELKKAEAEAY 132 usage_00809.pdb 121 ELEK---------- 124 usage_00810.pdb 121 ELEK---------- 124 EK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################