################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:43:17 2021 # Report_file: c_0120_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00011.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00018.pdb # 7: usage_00041.pdb # 8: usage_00062.pdb # 9: usage_00063.pdb # 10: usage_00082.pdb # 11: usage_00090.pdb # 12: usage_00094.pdb # # Length: 116 # Identity: 37/116 ( 31.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/116 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/116 ( 6.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVAIQTTDQGEVPN 60 usage_00006.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00011.pdb 1 -VTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 59 usage_00013.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00014.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00018.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGLSS- 59 usage_00041.pdb 1 GITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEVSD 60 usage_00062.pdb 1 KVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPK 60 usage_00063.pdb 1 KVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPK 60 usage_00082.pdb 1 GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 60 usage_00090.pdb 1 GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 60 usage_00094.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGTTDQGEVPN 60 Q P G L C Q m H M WY QDPG L LI S G usage_00005.pdb 61 GYNVSRSTIEDFPLRLLSAAPSQTSVYFCASSYLGNT----GELFFGEGSRLTVLE 112 usage_00006.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASSYPGGGF---YEQYFGPGTRLTVTE 113 usage_00011.pdb 60 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASGQGNF-----DIQYFGAGTRLSVLE 110 usage_00013.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSEFRDGN---EKLFFGSGTQLSVLE 113 usage_00014.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSESRTGI--NYGYTFGSGTRLTVVE 114 usage_00018.pdb 60 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSEEGA--LKEGTQYFGPGTRLLVLE 113 usage_00041.pdb 61 GYSVSRSKTEDFLLTLESATSSQTSVYFCATGTGDSN----QPQHFGDGTRLSILE 112 usage_00062.pdb 61 GYRVSRKKREHFSLILDSAKTNQTSVYFCASSLAGTGN---YEQYFGPGTRLTVTE 113 usage_00063.pdb 61 GYRVSRKKREHFSLILDSAKTNQTSVYFCASSLAGTGN---YEQYFGPGTRLTVTE 113 usage_00082.pdb 61 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASRPPLTT----GELFFGEGSRLTVLE 112 usage_00090.pdb 61 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASSPRLAG----DEQFFGPGTRLTVLE 112 usage_00094.pdb 61 GYNVSRSTIEDFPLRLLSAAPSQTSVYFCASSYLGNT----GELFFGEGSRLTVLE 112 VSR F L L SA TS Y CAs FG G rL v E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################