################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:18 2021 # Report_file: c_0608_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00338.pdb # 2: usage_00339.pdb # 3: usage_00340.pdb # 4: usage_00447.pdb # 5: usage_00448.pdb # 6: usage_00449.pdb # # Length: 136 # Identity: 99/136 ( 72.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/136 ( 72.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/136 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00338.pdb 1 SPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 60 usage_00339.pdb 1 --EELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 58 usage_00340.pdb 1 --EELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 58 usage_00447.pdb 1 -PEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 59 usage_00448.pdb 1 --EELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 58 usage_00449.pdb 1 -PEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS 59 EELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDS usage_00338.pdb 61 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH------QVDEDALTYLMLA 114 usage_00339.pdb 59 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH------QVDEDALTYLMLA 112 usage_00340.pdb 59 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH------LQVDEDALTYLML 112 usage_00447.pdb 60 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH------QVDEDALTYLMLA 113 usage_00448.pdb 59 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHYFGLQVDEDALTYLMLA 118 usage_00449.pdb 60 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH------LQVDEDALTYLML 113 RLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYH usage_00338.pdb 115 NHLVHTLCPDSITIA- 129 usage_00339.pdb 113 NHLVHTLCPDSITIA- 127 usage_00340.pdb 113 ANHLVHTLCPDSITIA 128 usage_00447.pdb 114 NHLVHTLCPDSITIA- 128 usage_00448.pdb 119 NHLVHTLCPDSITIA- 133 usage_00449.pdb 114 ANHLVHTLCPDSITIA 129 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################