################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:35 2021 # Report_file: c_0888_15.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00097.pdb # 2: usage_00241.pdb # 3: usage_00242.pdb # 4: usage_00387.pdb # 5: usage_00743.pdb # 6: usage_00744.pdb # 7: usage_00745.pdb # # Length: 85 # Identity: 6/ 85 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 85 ( 48.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 85 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 -GSTIIPPVIQFVEHNLRHADWHFRDAAVSAFGAIMDGPEEKVLEPIVKTGMQPLIAMME 59 usage_00241.pdb 1 ----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 56 usage_00242.pdb 1 ----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 56 usage_00387.pdb 1 -IPVLVPGIIFSLND-K-SSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVG 57 usage_00743.pdb 1 CEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 60 usage_00744.pdb 1 ----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 56 usage_00745.pdb 1 ----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 56 ivP v f dw rdaAv afg Il gpep l P V mp li m usage_00097.pdb 60 DESIQVRDSTAYALGRITE------ 78 usage_00241.pdb 57 DPSVVVRDTAAWTVGRICELLPEAA 81 usage_00242.pdb 57 DPSVVVRDTAAWTVGRICELL---- 77 usage_00387.pdb 58 DPFYKITSEALLVTQQLVKVIR--- 79 usage_00743.pdb 61 DPSVVVRDTAAWTVGRICEL----- 80 usage_00744.pdb 57 DPSVVVRDTAAWTVGRICELLP--- 78 usage_00745.pdb 57 DPSVVVRDTAAWTVGRICELLP--- 78 Dps vrd aa gri e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################