################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:31 2021 # Report_file: c_1320_66.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00316.pdb # 2: usage_00339.pdb # 3: usage_00566.pdb # 4: usage_00598.pdb # 5: usage_00616.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 44 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 44 ( 59.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 -HEKAVEIAKEVG-IVEVKR---------DNKK-----SSLLNA 28 usage_00339.pdb 1 MKQYLKTKLLEEVEGS-CTG------------KF----GYILC- 26 usage_00566.pdb 1 PEDKIIQVMKEFE-GEIIQRPPLRSAVKRRLR--TRKVYYIEV- 40 usage_00598.pdb 1 NPDDILLFRDRFD-GYIFLD------SKGLEY--PAVVE----- 30 usage_00616.pdb 1 PEDKIIQVMKEFE-GEIIQR----------LR--TRKVYYIEV- 30 e g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################