################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:50:28 2021 # Report_file: c_0305_15.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00015.pdb # 8: usage_00093.pdb # 9: usage_00094.pdb # 10: usage_00095.pdb # 11: usage_00096.pdb # 12: usage_00097.pdb # 13: usage_00098.pdb # 14: usage_00099.pdb # 15: usage_00100.pdb # 16: usage_00101.pdb # 17: usage_00110.pdb # # Length: 140 # Identity: 10/140 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/140 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/140 ( 30.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -AEIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 47 usage_00008.pdb 1 -AEIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 47 usage_00009.pdb 1 --EIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 46 usage_00010.pdb 1 -AEIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 47 usage_00011.pdb 1 --EIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 46 usage_00012.pdb 1 --EIRVFRQEDFEEVITLWERCD----LL-RPWNDPE-DIERK--NHD----VSLFLVAE 46 usage_00015.pdb 1 SVRIREAKEGDCGDILRLIRELAEFEKL----KISEEALRADGFG--DNPFY--HCLVAE 52 usage_00093.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00094.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00095.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00096.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00097.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00098.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00099.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00100.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00101.pdb 1 -MEIRVFRQEDFEEVITLWERCD----LL-RPWNDPEMDIERKM-NHD----VSLFLVAE 49 usage_00110.pdb 1 -GIIRYATPDDIED-VSIFIDAYN---FPGPRE-SVKSSFEISL-EVQ----PDGCLLAF 49 IR D e l l e e d LvAe usage_00007.pdb 48 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 99 usage_00008.pdb 48 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 99 usage_00009.pdb 47 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 98 usage_00010.pdb 48 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 99 usage_00011.pdb 47 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 98 usage_00012.pdb 47 V-NGEVVGTV-GGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 98 usage_00015.pdb 53 ILGPCVVGYGIYYFIYSTWKG-RTIYLEDIYV-PEYRGQGIGSKIIKKVAEVALDKGCSQ 110 usage_00093.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00094.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00095.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00096.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00097.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00098.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00099.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00100.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00101.pdb 50 V-NGDVVGTVMGGYD------GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK 102 usage_00110.pdb 50 L-KDEPVGGC-IFFY------NKQAWIGL-GVKKAYQRRGIGTEVFRRLLEIGRRK-VDT 99 vVG gV pe rgrGI rl c usage_00007.pdb 100 IQINVPEDNDVLGYERLG-- 117 usage_00008.pdb 100 IQINVPEDNDVLGYERLG-- 117 usage_00009.pdb 99 IQINVPEDNDVLGYERLG-- 116 usage_00010.pdb 100 IQINVPEDNDVLGYERLG-- 117 usage_00011.pdb 99 IQINVPEDNDVLGYERLG-- 116 usage_00012.pdb 99 IQINVPEDNDVLGYER---- 114 usage_00015.pdb 111 FRLAVLDWNQRA-DLYKALG 129 usage_00093.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00094.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00095.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00096.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00097.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00098.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00099.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00100.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00101.pdb 103 IQINVPEDNDMVLGMYERLG 122 usage_00110.pdb 100 IRLDA---SSQGYGLYKKFK 116 i v n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################