################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:45:01 2021 # Report_file: c_0248_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00176.pdb # 2: usage_00177.pdb # 3: usage_00178.pdb # 4: usage_00179.pdb # 5: usage_00193.pdb # 6: usage_00194.pdb # 7: usage_00195.pdb # 8: usage_00342.pdb # 9: usage_00343.pdb # 10: usage_00368.pdb # 11: usage_00369.pdb # 12: usage_00370.pdb # # Length: 133 # Identity: 63/133 ( 47.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/133 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/133 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 --LLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 57 usage_00177.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00178.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00179.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00193.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00194.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00195.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00342.pdb 1 YCCLLFYPLNY-TFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGG 59 usage_00343.pdb 1 YCCLLFYPLNY-TFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGG 59 usage_00368.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00369.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 usage_00370.pdb 1 YVLLYFYPL-DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGG 59 L FYPL TFVCP EII K F NVELLG SVDS Y HLAWK P KGG usage_00176.pdb 58 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 117 usage_00177.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00178.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00179.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00193.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00194.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00195.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNAIGRSVDEILR 119 usage_00342.pdb 60 IGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVL 119 usage_00343.pdb 60 IGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVL 119 usage_00368.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00369.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 usage_00370.pdb 60 IGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEIL 119 IGN TL SDI K ISK YNVL D S LR ID NG V H VN l igr v e l usage_00176.pdb 118 RIIDAIQHHEK-- 128 usage_00177.pdb 120 RIIDAIQ------ 126 usage_00178.pdb 120 RIIDAIQHHEK-- 130 usage_00179.pdb 120 RIIDAIQHHEKYG 132 usage_00193.pdb 120 RIIDAIQHHEK-- 130 usage_00194.pdb 120 RIIDAIQHHEK-- 130 usage_00195.pdb 120 IIDAIQHHEK--- 129 usage_00342.pdb 120 RTIDSIIHVDT-- 130 usage_00343.pdb 120 RTIDSIIHVDT-- 130 usage_00368.pdb 120 RIIDAIQHHEK-- 130 usage_00369.pdb 120 RIIDAIQH----- 127 usage_00370.pdb 120 RIIDAIQ------ 126 r id i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################