################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:41 2021 # Report_file: c_0700_68.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00020.pdb # 2: usage_00024.pdb # 3: usage_00027.pdb # 4: usage_00040.pdb # 5: usage_00239.pdb # 6: usage_00245.pdb # 7: usage_00248.pdb # 8: usage_00396.pdb # 9: usage_00398.pdb # 10: usage_00404.pdb # 11: usage_00407.pdb # 12: usage_00559.pdb # 13: usage_00561.pdb # 14: usage_00610.pdb # 15: usage_00646.pdb # 16: usage_00647.pdb # 17: usage_00785.pdb # # Length: 62 # Identity: 45/ 62 ( 72.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 62 ( 80.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 62 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ----VTLKDLRV 55 usage_00024.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ----VTLKDLRV 55 usage_00027.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEE-----VTLKDLRV 54 usage_00040.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRV 59 usage_00239.pdb 1 DKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRV 60 usage_00245.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRV 59 usage_00248.pdb 1 DKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDG--TVT--L- 55 usage_00396.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK-------VTLKDLRV 52 usage_00398.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEE-----VTLKDLRV 54 usage_00404.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ----VTLKDLRV 55 usage_00407.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ----VTLKDLRV 55 usage_00559.pdb 1 DKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK-------VTLKDLRV 53 usage_00561.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRV 59 usage_00610.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK--------TLKDLRV 51 usage_00646.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK--------TLKDLRV 51 usage_00647.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK--------TLKDLRV 51 usage_00785.pdb 1 -KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ----VTLKDLRV 55 KYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK Tlk r usage_00020.pdb 56 EL 57 usage_00024.pdb 56 EL 57 usage_00027.pdb 55 EL 56 usage_00040.pdb 60 EL 61 usage_00239.pdb 61 EL 62 usage_00245.pdb 60 EL 61 usage_00248.pdb 56 KD 57 usage_00396.pdb 53 EL 54 usage_00398.pdb 55 EL 56 usage_00404.pdb 56 EL 57 usage_00407.pdb 56 EL 57 usage_00559.pdb 54 EL 55 usage_00561.pdb 60 EL 61 usage_00610.pdb 52 EL 53 usage_00646.pdb 52 EL 53 usage_00647.pdb 52 EL 53 usage_00785.pdb 56 EL 57 el #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################