################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:41 2021 # Report_file: c_1079_93.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00136.pdb # 2: usage_00137.pdb # 3: usage_00367.pdb # 4: usage_00381.pdb # 5: usage_00478.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 62 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 62 ( 48.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 ------TAGFTAAMSVEALQSRGVEPGNGPVLVTG-ASGGVGTVAVDL--LSAAGFEVVA 51 usage_00137.pdb 1 --------GFTAAMSVEALQSRGVEPGNGPVLVTG-ASGGVGTVAVDL--LSAAGFEVVA 49 usage_00367.pdb 1 -----------WPDVISSLQDQGVT----RVCVAGP-----DSLFGRVGTTT-RAFEVIA 39 usage_00381.pdb 1 -----------ADLVVSQLEAQGVR----QVFGI-P--GAKIDKVFDS--LLDSSIRIIP 40 usage_00478.pdb 1 GFTALC----------VALEDAGIRPQDGEVVVTG-ASGGVGSTAVAL--LHKLGYQVAA 47 L Gv V v l v a usage_00136.pdb 52 SS 53 usage_00137.pdb 50 SS 51 usage_00367.pdb 40 AT 41 usage_00381.pdb 41 VR 42 usage_00478.pdb 48 VS 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################