################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:17 2021 # Report_file: c_0721_73.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00170.pdb # 2: usage_00407.pdb # 3: usage_00408.pdb # 4: usage_00409.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # 7: usage_00412.pdb # 8: usage_00440.pdb # 9: usage_00598.pdb # # Length: 83 # Identity: 7/ 83 ( 8.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 83 ( 18.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 83 ( 42.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00170.pdb 1 ------------------GFVKNRYVGRTFIMSVRRKLNANRAEFRDKNVLLVDDSIVRG 42 usage_00407.pdb 1 IPLKVIDVKF---------KPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 37 usage_00408.pdb 1 ------------------EKPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 28 usage_00409.pdb 1 -PLKVIDVKFYKG----IEKPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 41 usage_00410.pdb 1 -----------------GEKPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 29 usage_00411.pdb 1 -----------------GEKPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 29 usage_00412.pdb 1 -PLKVIDVKFY-----RGEKPVI--------------TIPIHGDLKDKRVVIVDDVSDTG 40 usage_00440.pdb 1 -VIRYIDIKF----------PVI--------------RSVYTDSLEGKKVLVVDDVADTG 35 usage_00598.pdb 1 -EVDYVHATRYRGDLTGG-DILW--------------KVRPSSNLAGRTVLVVDDILDGG 44 l k V VDD d G usage_00170.pdb 43 TTSEQIIEMAREAGAKKVYLAS- 64 usage_00407.pdb 38 KTLEVVIEEVKKLGAKEIKIACL 60 usage_00408.pdb 29 KTLEVVIEEVKKLGAKEIKIACL 51 usage_00409.pdb 42 KTLEVVIEEVKKLGAKEIKIACL 64 usage_00410.pdb 30 KTLEVVIEEVKKLGAKEIKIACL 52 usage_00411.pdb 30 KTLEVVIEEVKKLGAKEIKIACL 52 usage_00412.pdb 41 KTLEVVIEEVKKLGAKEIKIACL 63 usage_00440.pdb 36 ETLEAVSNVITMFNPAKVMTAAL 58 usage_00598.pdb 45 ITLAAIINEIKAMGAAEVYSAVL 67 Tle i ga A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################