################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:06 2021 # Report_file: c_0650_37.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00108.pdb # 2: usage_00444.pdb # 3: usage_00567.pdb # 4: usage_00655.pdb # 5: usage_00801.pdb # 6: usage_00981.pdb # # Length: 68 # Identity: 8/ 68 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 68 ( 23.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 68 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 VINITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPS---DDDIYDCKVEHWGLEE 57 usage_00444.pdb 1 -INITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPS---DDDIYDCKVEHWGLEE 56 usage_00567.pdb 1 -VNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPS---TDDFYDCEVDHWGLEE 56 usage_00655.pdb 1 VINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS---DDDIYDCKVEHWGLEE 57 usage_00801.pdb 1 PITISWMKDGMVRDQETRWGGIVPNSDGTYHASAAIDVLPED--GD-KYWCRVEHASLPQ 57 usage_00981.pdb 1 EITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQ---RYTCHVQHEGLPK 57 i tW r t D f k p Y C V H gL usage_00108.pdb 58 PVLKH--- 62 usage_00444.pdb 57 PVLKHWEP 64 usage_00567.pdb 57 PLRKHWEF 64 usage_00655.pdb 58 PVLKHWSS 65 usage_00801.pdb 58 PGLFSW-- 63 usage_00981.pdb 58 PLTLRW-- 63 P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################