################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:17 2021 # Report_file: c_1346_24.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00166.pdb # 2: usage_00167.pdb # 3: usage_00202.pdb # 4: usage_00209.pdb # 5: usage_00273.pdb # 6: usage_00325.pdb # 7: usage_00326.pdb # 8: usage_00327.pdb # 9: usage_00328.pdb # 10: usage_00329.pdb # 11: usage_00330.pdb # 12: usage_00331.pdb # 13: usage_00340.pdb # 14: usage_00352.pdb # 15: usage_00381.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 40 ( 15.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 40 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 --HRSV-LAACS-Q--YFKKLFTSQQ---NVYEID----- 26 usage_00167.pdb 1 --HRSV-LAACS-S--YFHSRIVG-QE--LNITL------ 25 usage_00202.pdb 1 ---RSV-LAACS-Q--YFKKLFTS-Q---NVYEID----- 24 usage_00209.pdb 1 --HRSV-LAACS-S--YFHSRIVG-QT-DAELTVT---LP 29 usage_00273.pdb 1 LEDVLPFFADWDLGWFDIRDLLTR-N-QLILQYP------ 32 usage_00325.pdb 1 ---RAV-LAACS-E--YFWQALVG-QT-KNDLVVS---L- 27 usage_00326.pdb 1 ---RAV-LAACS-E--YFWQALVG-QT-KNDLVVS---LP 28 usage_00327.pdb 1 --HRAV-LAACS-E--YFWQALVG-QT-KNDLVVS----- 27 usage_00328.pdb 1 ---RAV-LAACS-E--YFWQALVG-QT-KNDLVVS---LP 28 usage_00329.pdb 1 ---RAV-LAACS-E--YFWQALVG-QT-KNDLVVS---LP 28 usage_00330.pdb 1 ---RAV-LAACS-E--YFWQALVG-QT-KNDLVVS---LP 28 usage_00331.pdb 1 --HRAV-LAACS-E--YFWQALVG-QT-KNDLVVS---LP 29 usage_00340.pdb 1 --HRAV-LAASS-S--YFRDLFNN-SR-SAVVELP----- 27 usage_00352.pdb 1 --HKTV-LMACS-G--LFYSIFTD-QLK-CNL--SVIN-- 28 usage_00381.pdb 1 --HKAV-LAACS-E--YFKMLFVD-QK--D-VVHL----- 25 v laa s f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################