################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:11 2021 # Report_file: c_0273_3.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00031.pdb # # Length: 205 # Identity: 139/205 ( 67.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 181/205 ( 88.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/205 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -----MDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTI 55 usage_00018.pdb 1 ----HMDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTI 56 usage_00031.pdb 1 GSHMASDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTI 60 mDRKTEFIeCtnaFNEKpKKGIpMLIEKGFIaSDSdkDIAeFLFnNNnRmNKKTI usage_00017.pdb 56 GLLLCHPDKVSLLNEYIRLFDFSGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCE 115 usage_00018.pdb 57 GLLLCHPDKVSLLNEYIRLFDFSGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCE 116 usage_00031.pdb 61 GLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSA 120 GLLLChPdKvSLLnEyIrLFDFsGLRVDEAIRILLTKFRLPGESQQIERIiEAFSSaYce usage_00017.pdb 116 NQ-DYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHNPQVKEHMSFEDYSGNL 174 usage_00018.pdb 117 NQ-DYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHNPQVKEHMSFEDYSGNL 175 usage_00031.pdb 121 DQS-----------------VQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNL 163 nQ VQPDADSVFiLSYSIIMLNTDlHNPQVKeHMsFeDYSgNL usage_00017.pdb 175 KGCCNHKDFPFWYLDRVYCSIRDKE 199 usage_00018.pdb 176 KGCCNHKDFPFWYLDRVYCSIRDK- 199 usage_00031.pdb 164 RGCYNGKDFPRWYLHKIYTSIKVKE 188 kGCcNhKDFPfWYLdrvYcSIrdK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################