################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:31 2021 # Report_file: c_0688_79.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00041.pdb # 4: usage_00131.pdb # 5: usage_00307.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 64 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 64 ( 64.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SAVIMPGEEIT---SMI---F-L-V---EGKIKLDIIFED------GSEK---LLYYA-G 39 usage_00002.pdb 1 SAVIMPGEEIT---SMI---F-L-V---EGKIKLDIIFED------GSEK---LLYYA-G 39 usage_00041.pdb 1 -----QIVPVPDVYNLVCVALGNLE---IREIRALF--CS------EKQV---LLKSG-- 39 usage_00131.pdb 1 ------AKVFP---T-------K--ADRLAIGEFN-----GLIIIAVIFKPVGSEALS-V 36 usage_00307.pdb 1 -----TLYQSWRY-SQA-DNG-CAE---TVTVKVVY--ED------DTEG---LCYAVAP 38 l usage_00001.pdb 40 G--- 40 usage_00002.pdb 40 G--- 40 usage_00041.pdb ---- usage_00131.pdb 37 ISRS 40 usage_00307.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################