################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:12 2021 # Report_file: c_1256_108.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00139.pdb # 2: usage_02512.pdb # 3: usage_03518.pdb # 4: usage_03519.pdb # 5: usage_03600.pdb # 6: usage_03628.pdb # 7: usage_03823.pdb # # Length: 52 # Identity: 38/ 52 ( 73.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 52 ( 73.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 52 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP-----T---YLPRKFKTTVVIP- 43 usage_02512.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP----------LPRKFKTTVVIP- 41 usage_03518.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP-------------KFKTTVVIPP 39 usage_03519.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP-----T---YLPRKFKTTVVIP- 43 usage_03600.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP-----T---YLPRKFKTTVVIP- 43 usage_03628.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLP-----T---YLPRKFKTTVVIPP 44 usage_03823.pdb 1 VLCTSNPYESQLHAEAYEWAKKISEHLLPRTEPILGQTYLPRKFKTTVVIPP 52 VLCTSNPYESQLHAEAYEWAKKISEHLLP KFKTTVVIP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################