################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:53 2021 # Report_file: c_0592_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00253.pdb # 2: usage_00254.pdb # 3: usage_00376.pdb # 4: usage_00377.pdb # 5: usage_00378.pdb # 6: usage_00379.pdb # 7: usage_00380.pdb # # Length: 97 # Identity: 36/ 97 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 97 ( 38.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 97 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00253.pdb 1 VVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALN 60 usage_00254.pdb 1 VVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALN 60 usage_00376.pdb 1 RVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFI 60 usage_00377.pdb 1 RVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFI 60 usage_00378.pdb 1 RVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFI 60 usage_00379.pdb 1 RVALFSTGDQLQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFI 60 usage_00380.pdb 1 RVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFI 60 VA STG eL P L G I D NR G INLGI D P L A usage_00253.pdb 61 EGISRADVIITSGG-----V-----DYLKQVLDIDLH 87 usage_00254.pdb 61 EGISRADVIITSGG-----VSMGEKDYLKQVLDIDLH 92 usage_00376.pdb 61 EADSQADVVISSGGVSVGE-----ADYTKTILEE--- 89 usage_00377.pdb 61 EADSQADVVISSGGVSVGE-----ADYTKTILEE--- 89 usage_00378.pdb 61 EADSQADVVISSGGVSVGE-----ADYTKTILEE--- 89 usage_00379.pdb 61 EADSQADVVISSGGVSVGE-----ADYTKTILEEL-- 90 usage_00380.pdb 61 EADSQADVVISSGGVSVGE-----ADYTKTILEEL-- 90 E S ADV I SGG DY K L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################