################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:42 2021 # Report_file: c_0238_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00051.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00074.pdb # # Length: 137 # Identity: 44/137 ( 32.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/137 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/137 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 RY------LEKF--KPLDQL-RYVQE-QRGKSGIIYCNSRAKVEDTAARLQSKGISAAAY 50 usage_00016.pdb 1 --NIRYMLMEKF--KPLDQLMRYVQE-QRGKSGIIYCNSRAKVEDTAARLQSKGISAAAY 55 usage_00051.pdb 1 --NLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAY 58 usage_00061.pdb 1 --NIQYRVGLKD--SPKTQLLHFIREEHPGDAGIVYCLSRKSVEETAKWLQAQGIDALAY 56 usage_00062.pdb 1 --NIQYRVGLKD--SPKTQLLHFIREEHPGDAGIVYCLSRKSVEETAKWLQAQGIDALAY 56 usage_00063.pdb 1 --NIQYRVGLKD--SPKTQLLHFIREEHPGDAGIVYCLSRKSVEETAKWLQAQGIDALAY 56 usage_00074.pdb 1 --NIRYMLMEKF--KPLDQLMRYVQE-QRGKSGIIYCNSRAKVEDTAARLQSRGISAAAY 55 K p ql e g GI YC SR ve tA LQ Gi A AY usage_00015.pdb 51 HAGLENNVRADVQEKFQRDD-LQIVVATVAFG-GINKPNVRFVVHFDIPRNIESYYQETG 108 usage_00016.pdb 56 HAGLENNVRADVQEKFQRDD-LQIVVATVA----INKPNVRFVVHFDIPRNIESYYQETG 110 usage_00051.pdb 59 HAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESG 118 usage_00061.pdb 57 HAGLSSTERNNVQERFLNEE-GVIVCATVA-----DKPNVRFVAHLDLPKSMEGYYQETG 110 usage_00062.pdb 57 HAGLSSTERNNVQERFLNEE-GVIVCATVA----IDKPNVRFVAHLDLPKSMEGYYQETG 111 usage_00063.pdb 57 HAGLSSTERNNVQERFLNEE-GVIVCATVA-----DKPNVRFVAHLDLPKSMEGYYQETG 110 usage_00074.pdb 56 HAGLEHEVRASVQEKFQRDD-LQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETG 114 HAGL R VQe f iv ATvA KPnVRFV H d P E YYQEtG usage_00015.pdb 109 RAGRDGLPAEALFYDPA 125 usage_00016.pdb 111 RAGRDGLPAEAMLF--- 124 usage_00051.pdb 119 RAGRDGEISHCLLFYTY 135 usage_00061.pdb 111 RAGRDGLPSTAWMVYGL 127 usage_00062.pdb 112 RAGRDGLPSTAWMVYGL 128 usage_00063.pdb 111 RAGRDGLPSTAWMVYG- 126 usage_00074.pdb 115 RAGRDGLPAEAMLFYDP 131 RAGRDGlp a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################