################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:20 2021 # Report_file: c_1101_40.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00219.pdb # 2: usage_00697.pdb # 3: usage_00698.pdb # # Length: 127 # Identity: 104/127 ( 81.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/127 ( 84.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/127 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00219.pdb 1 PKELVNEWSLKIRKE-RVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKE-IRSR 58 usage_00697.pdb 1 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSR 60 usage_00698.pdb 1 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSR 60 PKELVNEWSLKIRKE RVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKE IRSR usage_00219.pdb 59 KAVSKLYASKAHNSVL------GKNQLAVLGSLQKSTEV-KA-QSLVKIPEIQATR-ELS 109 usage_00697.pdb 61 KAVSKLYASKAHM---NSVLMGMKNQLAVL-SLQKSTEVMKAMQSLVKIPEIQATMRELS 116 usage_00698.pdb 61 KAVSKLYASKAHM---NSVLMGMKNQLAVLGSLQKSTEVMKAMQSLVKIPEIQATMRELS 117 KAVSKLYASKAHm mKNQLAVL SLQKSTEV KA QSLVKIPEIQATm ELS usage_00219.pdb 110 KE----- 111 usage_00697.pdb 117 KEM---- 119 usage_00698.pdb 118 KEMMKAG 124 KE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################