################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:27 2021 # Report_file: c_0946_53.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # # Length: 40 # Identity: 28/ 40 ( 70.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 40 ( 72.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 40 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLPLWASYTFLS-- 38 usage_00007.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLPL-WASY-T--- 35 usage_00008.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYTFLS 39 usage_00009.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYTFLS 39 usage_00010.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYTFLS 39 usage_00011.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYT--- 36 usage_00014.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYTFLS 39 usage_00015.pdb 1 RPRILLKQHRVCLLQQQQFLTGYSLDLLMP-LWASYTFLS 39 RPRILLKQHRVCLLQQQQFLTGYSLDLL t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################