################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:20:28 2021 # Report_file: c_0086_7.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00023.pdb # 7: usage_00028.pdb # 8: usage_00030.pdb # 9: usage_00031.pdb # 10: usage_00036.pdb # 11: usage_00040.pdb # 12: usage_00045.pdb # 13: usage_00046.pdb # 14: usage_00057.pdb # 15: usage_00058.pdb # 16: usage_00066.pdb # 17: usage_00080.pdb # 18: usage_00090.pdb # 19: usage_00106.pdb # 20: usage_00107.pdb # 21: usage_00108.pdb # 22: usage_00120.pdb # 23: usage_00121.pdb # 24: usage_00132.pdb # 25: usage_00137.pdb # 26: usage_00139.pdb # 27: usage_00140.pdb # 28: usage_00141.pdb # 29: usage_00147.pdb # 30: usage_00161.pdb # 31: usage_00163.pdb # 32: usage_00172.pdb # # Length: 137 # Identity: 17/137 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/137 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/137 ( 24.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 EVKLSESGPGLVKPSQSLSLTCTVTGYSITT-N-YAWTWIRQFPGNKLEWMGYIRS--SV 56 usage_00004.pdb 1 -VKLSESGPGLVKPSQSLSLTCTVTGYSITT-N-YAWTWIRQFPGNKLEWMGYIRS--SV 55 usage_00005.pdb 1 --KLSESGPGLVKPSQSLSLTCTVTGYSITT-N-YAWTWIRQFPGNKLEWMGYIRS--SV 54 usage_00006.pdb 1 -VKLSESGPGLVKPSQSLSLTCTVTGYSITT-N-YAWTWIRQFPGNKLEWMGYIRS--SV 55 usage_00007.pdb 1 -VKLSESGPGLVKPSQSLSLTCTVTGYSITT-N-YAWTWIRQFPGNKLEWMGYIRS--SV 55 usage_00023.pdb 1 EVQLQESGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMGYISY--SG 56 usage_00028.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMGYITY--SG 55 usage_00030.pdb 1 DVQLQESGPGLVKPSQSLSLTCSVTGYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 56 usage_00031.pdb 1 DVQLQESGPGLVKPSQSLSLTCSVTGYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 56 usage_00036.pdb 1 -VQLQESGPGLVRPSQTLSLTCTVSGFSLTG---YGVNWVRQPPGRGLEWIGMIWG--DG 54 usage_00040.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMGYISY--SG 55 usage_00045.pdb 1 DVQLQESGPSLVKPSQSLSLTCTVTGYSITS-D-FAWNWIRQFPGNKLEWMGYISY--SG 56 usage_00046.pdb 1 -VQLQESGPSLVKPSQSLSLTCTVTGYSITS-D-FAWNWIRQFPGNKLEWMGYISY--SG 55 usage_00057.pdb 1 GVQLQESGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMGYITY--SG 56 usage_00058.pdb 1 --QLQESGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMGYITY--SG 54 usage_00066.pdb 1 --QLQQSGPGLVKPSQTLSLTCAISGDSVSS-NSAAWGWIRQSPGRGLEWLGIIQKRSKW 57 usage_00080.pdb 1 DVQLQESGPGLVKPSQSLSLTCTVTGYSITS-G-YAWNWIRQFPGNKLEWMGYIRY--SG 56 usage_00090.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGFSITS-D-YAWNWIRQFPGSKLEWMGFISY--SG 55 usage_00106.pdb 1 --QLLESGPDLVKPSQSLSLTCTVTGYSITS-G-YNWHWIRQFPGNKLEWMGYIHY--RG 54 usage_00107.pdb 1 --QLLESGPDLVKPSQSLSLTCTVTGYSITS-G-YNWHWIRQFPGNKLEWMGYIHY--RG 54 usage_00108.pdb 1 --QLLESGPDLVKPSQSLSLTCTVTGYSITS-G-YNWHWIRQFPGNKLEWMGYIHY--RG 54 usage_00120.pdb 1 DVQLQESGPGLVKPSQSLSLTCTVTGYLITT-D-YAWNWIRQFPGNKLEWMGYISY--SG 56 usage_00121.pdb 1 -VQLQESGPGLVKPSQSLSLTCSVTDYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 55 usage_00132.pdb 1 -VQLQQSGPEDVKPGASVKISCKASGYSLST-SGMGVNWVKQSPGKGLEWLAHIYW--DD 56 usage_00137.pdb 1 --KLQESGAGLVQPSQSLSLTCSVTGYSITS-G-YYWNWIRLFPGNKLEWVGYISN--VG 54 usage_00139.pdb 1 --QLQQSGPGLVKPSQTLSLTCAISGDSVSS-NSAAWGWIRQSPGRGLEWLGIIQKRSKW 57 usage_00140.pdb 1 --QLKESGPGLVRPSQSLSLTCSVTGYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 54 usage_00141.pdb 1 --QLKESGPGLVRPSQSLSLTCSVTGYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 54 usage_00147.pdb 1 --TLKESGPGILQPSQTLSLTCSFSGFSLRTSR-VGVSWIRQPSGKGLEWLAHIYW--DD 55 usage_00161.pdb 1 -VTLKESGPGILKPSQTLSLTCSFSGFSLST-SGMSVGWIRQPS--GLEWLAHIWW--DD 54 usage_00163.pdb 1 QVKLQQSGPGLVKPSQSLSLTCTVTGYSITS-D-YAWNWIRQFPGNKLEWMAYISY--SG 56 usage_00172.pdb 1 --QLQESGPGLVKPSQSLSLTCSVTDYSITS-G-YYWNWIRQFPGNKLEWMGYISY--DG 54 L SGp Psq lsltC s W rq LEW I usage_00003.pdb 57 ITRYNPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYD---YY---G--NTGDY 108 usage_00004.pdb 56 ITRYNPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYD---YY---G--NTGDY 107 usage_00005.pdb 55 ITRYNPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYD---YY---G--NTGDY 106 usage_00006.pdb 56 ITRYNPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYD---YY---G--NTGDY 107 usage_00007.pdb 56 ITRYNPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYD---YY---G--NTGDY 107 usage_00023.pdb 57 TTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCGRTG---VY-RYP--ERAPY 110 usage_00028.pdb 56 TTSYNPSLKSRISISRDTSKNQFFMQLNSVTTEDTGTFYCTRGN--------------GD 101 usage_00030.pdb 57 SNNYNPSLKNRVSITRDTSKNHFFLKLSSVTTEDTATYYCARAS---DS---D--GFAYW 108 usage_00031.pdb 57 SNNYNPSLKNRVSITRDTSKNHFFLKLSSVTTEDTATYYCARAS---DS---D--GFAYW 108 usage_00036.pdb 55 NTDYNSALKSRVTMLKDTSKNQFSLRLSSVTAADTAVYYCARER---DY---R--LDYWG 106 usage_00040.pdb 56 STSYSPSLKSRISLTRDTSKNQFFLQLNSVTTEDTATYYCVTSLTWLLR------RKRSY 109 usage_00045.pdb 57 NTRYNPSLKSRISITRDTSSNQFFLQLNSVTIEDTATYYCVTAG---RG---F-----PY 105 usage_00046.pdb 56 NTRYNPSLKSRISITRDTSKNQFFLQLNSVTIEDTATYYCVTAG---RG---F-----PY 104 usage_00057.pdb 57 STGYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCASYD---DY---T--WFTYW 108 usage_00058.pdb 55 STGYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCASYD---DY---T--WFTYW 106 usage_00066.pdb 58 YNNYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARYS---YP---F--YSIDY 109 usage_00080.pdb 57 DTRYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAIGY---GN---S-----DY 105 usage_00090.pdb 56 DTSFNPSLKSRISVTRDTSKNQFFLQLNSVTTEDTATYYCASYD---GY---S--FDYWG 107 usage_00106.pdb 55 TTNYNTSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCACDD---FY---S-----DY 103 usage_00107.pdb 55 TTNYNTSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCACDD---FY---S-----DY 103 usage_00108.pdb 55 TTNYNTSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCACDD---FY---S-----DY 103 usage_00120.pdb 57 FTSYNPSLKSQISITRDTSKNQFFLQLNSVTTEDTATYYCAFGN---YL---P-----AY 105 usage_00121.pdb 56 SNNYNPSLKNRISITRDPSKDQFFLNLNSVTTEDTATYYCTRGS--------------LV 101 usage_00132.pdb 57 DKRYNPSLKSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRG---GS--SH-YYAMDY 110 usage_00137.pdb 55 DNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSE---YY-SVT-GYAMDY 109 usage_00139.pdb 58 YNNYAVKVKSKITINPDTSKNQFSLQLSSVTPEDTAVYYCARYS---YP---F--YSIDY 109 usage_00140.pdb 55 SNNYNPSLKGRISITRDTSKNQFFLKLNSVTTDDTATYYCARAY---IG---F-----AY 103 usage_00141.pdb 55 SNNYNPSLKGRISITRDTSKNQFFLKLNSVTTDDTATYYCARAY---IG---F-----AY 103 usage_00147.pdb 56 DKRYNPSLESRLTISKDTSRNQVFLKITSVDTADTATYYCARRG---FYGRKYEVNHFDY 112 usage_00161.pdb 55 DKYYNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARRT---TT---A--DYFAY 106 usage_00163.pdb 57 STTYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTAIYYCARGG---TG---F-----DY 105 usage_00172.pdb 55 SNNYNPSLKNRISITRDPSKDQFFLNLNSVTTEDTATYYCTRGS--------------LV 100 y k D s l Sv Dt yYC usage_00003.pdb 109 WGQGTSVTV-------- 117 usage_00004.pdb 108 WGQGTSVTVS------- 117 usage_00005.pdb 107 WGQGTSVTVS------- 116 usage_00006.pdb 108 WGQGTSVTV-------- 116 usage_00007.pdb 108 WGQGTSVTVS------- 117 usage_00023.pdb 111 WGQGTLVTVS------- 120 usage_00028.pdb 102 WGQGTTLTVS------- 111 usage_00030.pdb 109 G-QGTLVTVS------- 117 usage_00031.pdb 109 G-QGTLVTVS------- 117 usage_00036.pdb 107 --QGSLVTV-------- 113 usage_00040.pdb 110 WGQGTTVTVS------- 119 usage_00045.pdb 106 WGQGTLVTVS------- 115 usage_00046.pdb 105 WGQGTLVTVS------- 114 usage_00057.pdb 109 G-QGTLVTV-------- 116 usage_00058.pdb 107 G-QGTLVTVS------- 115 usage_00066.pdb 110 WGQGTLVTV-------- 118 usage_00080.pdb 106 WGQGTLVTVS------- 115 usage_00090.pdb 108 --QGTTLTV-------- 114 usage_00106.pdb 104 WGQGTIVTVS------- 113 usage_00107.pdb 104 WGQGTIVTVS------- 113 usage_00108.pdb 104 WGQGTIVTVS------- 113 usage_00120.pdb 106 WGQGTLVTVS------- 115 usage_00121.pdb 102 WGQGTLVTVS------- 111 usage_00132.pdb 111 WGQGTTVTVS------- 120 usage_00137.pdb 110 WGQGTTVT--------- 117 usage_00139.pdb 110 WGQGTLVT--------- 117 usage_00140.pdb 104 WGQGTLVTV-------- 112 usage_00141.pdb 104 WGQGTLVTVS------- 113 usage_00147.pdb 113 WGQGTTLTVS------- 122 usage_00161.pdb 107 WGQGTTLTVS------- 116 usage_00163.pdb 106 WGAGTTLTVS------- 115 usage_00172.pdb 101 WGQGTLVTVSAASTKGP 117 qGt T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################