################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:03:28 2021 # Report_file: c_0612_21.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00029.pdb # 2: usage_00072.pdb # 3: usage_00252.pdb # 4: usage_00313.pdb # 5: usage_00338.pdb # 6: usage_00363.pdb # 7: usage_00460.pdb # 8: usage_00461.pdb # 9: usage_00462.pdb # 10: usage_00463.pdb # 11: usage_00464.pdb # 12: usage_00465.pdb # 13: usage_00539.pdb # 14: usage_00726.pdb # 15: usage_00781.pdb # 16: usage_00840.pdb # 17: usage_00843.pdb # 18: usage_01052.pdb # # Length: 99 # Identity: 34/ 99 ( 34.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/ 99 ( 86.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 99 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 ----------VLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 50 usage_00072.pdb 1 --------PEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVL 52 usage_00252.pdb 1 YTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 60 usage_00313.pdb 1 ----------VLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 50 usage_00338.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00363.pdb 1 -------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 53 usage_00460.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00461.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00462.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00463.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00464.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00465.pdb 1 --------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 52 usage_00539.pdb 1 -------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 53 usage_00726.pdb 1 ----KEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 56 usage_00781.pdb 1 -------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 53 usage_00840.pdb 1 -------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 53 usage_00843.pdb 1 ------IIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 54 usage_01052.pdb 1 -------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 53 VldRirklaDqCtglqGf VfHsfGGGTGSGFtsLLmErLsvdYGkkskL usage_00029.pdb 51 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 89 usage_00072.pdb 53 SCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDN 91 usage_00252.pdb 61 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 99 usage_00313.pdb 51 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 89 usage_00338.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 91 usage_00363.pdb 54 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 90 usage_00460.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00461.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00462.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00463.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00464.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00465.pdb 53 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 89 usage_00539.pdb 54 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 92 usage_00726.pdb 57 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV-- 93 usage_00781.pdb 54 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 92 usage_00840.pdb 54 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 92 usage_00843.pdb 55 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 93 usage_01052.pdb 54 EFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 92 efsiyPaPQVStaVvEPYNsiltthTtlehsDcafmv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################