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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:56:03 2021
# Report_file: c_0109_12.html
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#====================================
# Aligned_structures: 3
#   1: usage_00040.pdb
#   2: usage_00123.pdb
#   3: usage_00157.pdb
#
# Length:        191
# Identity:      162/191 ( 84.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    178/191 ( 93.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/191 (  6.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00040.pdb         1  NELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGACIHAFSDTGEITPEEAPLLVRSLLSA   60
usage_00123.pdb         1  -----------APHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSA   49
usage_00157.pdb         1  -----------APHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAPLLVRSLLSA   49
                                      APHQAYVnEQCQRPNLAPGGFGACIHAFtDTGEITPdEAPLLVRSLLSA

usage_00040.pdb        61  GLDTTVNGIAAAVYCLARFPDEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVEL  120
usage_00123.pdb        50  GLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVEL  109
usage_00157.pdb        50  GLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVEL  109
                           GLDTTVNGIgAAVYCLARFPgElqRLRsDPtLARNAFEEAVRFESPVQTFFRTTTReVEL

usage_00040.pdb       121  AGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGHVGFGSGVHMCVGQLVARLEG  180
usage_00123.pdb       110  GGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEG  169
usage_00157.pdb       110  GGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEG  169
                           gGAvIGEGEKVLMFLGSANRDPRRWsDPDlYDITRKTSGHVGFGSGVHMCVGQLVARLEG

usage_00040.pdb       181  EVVLAALARKV  191
usage_00123.pdb       170  EVMLSALAR--  178
usage_00157.pdb       170  EVMLSALAR--  178
                           EVmLsALAR  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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