################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:06 2021 # Report_file: c_0649_27.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00018.pdb # 2: usage_00045.pdb # 3: usage_00046.pdb # 4: usage_00057.pdb # 5: usage_00320.pdb # 6: usage_00340.pdb # # Length: 68 # Identity: 5/ 68 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 68 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 68 ( 38.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -WFRLERV-SFNNYKLVFCPQ-----------DKCGDIGISIDHD-DGTRRLVVSKNKPL 46 usage_00045.pdb 1 SWFRIERH-GD-SYKLVHCPRG--------S-TPCRDVGIETV-GGGGRRYLAPRDR-PL 47 usage_00046.pdb 1 SWFRIERH-GD-SYKLVHCPRG--------S-TPCRDVGIETV-GGGGRRYLAPRDR-PL 47 usage_00057.pdb 1 -SFKIKPY-RD-DYKLVYCE-------------SCKDLGISID-D-ENNRLLVVKDGDPL 42 usage_00320.pdb 1 -PFRVEKE-GE-GYKIVYYPDR--------G-QTGLDIGLVHR---NDKYYLAATEGEPF 45 usage_00340.pdb 1 SYFKIVKSSKI-GYNLLSCPFTSIICLRCPEDQFCAKVGVVIQ---NGKRRLALVNENPL 56 F Yklv cp c d G r L Pl usage_00018.pdb 47 VVQFQK-- 52 usage_00045.pdb 48 AVRFTRAS 55 usage_00046.pdb 48 AVRFTRAS 55 usage_00057.pdb 43 AVRFVK-- 48 usage_00320.pdb 46 VF------ 47 usage_00340.pdb 57 DVLFQE-- 62 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################