################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:10:57 2021 # Report_file: c_0331_4.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00015.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00077.pdb # 7: usage_00078.pdb # 8: usage_00079.pdb # 9: usage_00091.pdb # 10: usage_00095.pdb # 11: usage_00096.pdb # 12: usage_00097.pdb # 13: usage_00098.pdb # 14: usage_00124.pdb # 15: usage_00125.pdb # 16: usage_00281.pdb # 17: usage_00283.pdb # 18: usage_00295.pdb # 19: usage_00315.pdb # # Length: 143 # Identity: 112/143 ( 78.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/143 ( 79.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/143 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAH 60 usage_00059.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00060.pdb 1 ----------------VDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 44 usage_00061.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00062.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00077.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAH 60 usage_00078.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAH 60 usage_00079.pdb 1 -AEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAH 59 usage_00091.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00095.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00096.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00097.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00098.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00124.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00125.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00281.pdb 1 TAEEKAAVTAFWGKVHVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00283.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAH 60 usage_00295.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVKAH 60 usage_00315.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSNADAVMNNPKVKAH 60 VDEVG EALGRLLVVYPWTQRFFE FGDLS ADAVMNN KVKAH usage_00015.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFT 120 usage_00059.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00060.pdb 45 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 104 usage_00061.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00062.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00077.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFT 120 usage_00078.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFT 120 usage_00079.pdb 60 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFT 119 usage_00091.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00095.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00096.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00097.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00098.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00124.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00125.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00281.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARHFGKEFT 120 usage_00283.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFT 120 usage_00295.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAALSELHCDKLHVDPENFKLLGNVLVVVLARNFGKEFT 120 usage_00315.pdb 61 GKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHHGNEFT 120 GKKVLDSFSNGMKHLDDLKGTFA LSELHCDKLHVDPENFkLLGNVLVVVLAR G EFT usage_00015.pdb 121 PLLQAEFQKVVAGVANALA---- 139 usage_00059.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00060.pdb 105 PVLQADFQKVVAGVANALAH--- 124 usage_00061.pdb 121 PVLQADFQKVVAGVANALAHRYH 143 usage_00062.pdb 121 PVLQADFQKVVAGVANALAH--- 140 usage_00077.pdb 121 PLLQAEFQKVVAGVANALA---- 139 usage_00078.pdb 121 PLLQAEFQKVVAGVANALA---- 139 usage_00079.pdb 120 PLLQAEFQKVVAGVANALA---- 138 usage_00091.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00095.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00096.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00097.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00098.pdb 121 PVLQADFQKVVAGVANALAH--- 140 usage_00124.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00125.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00281.pdb 121 PVLQADFQKVVAGVANALA---- 139 usage_00283.pdb 121 PLLQAEFQKVVAGVANALAHRYH 143 usage_00295.pdb 121 PVLQADFQKVVAGVANALAH--- 140 usage_00315.pdb 121 PVLQADFQKVVAGVANALAH--- 140 P LQA FQKVVAGVANALA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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