################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:33 2021 # Report_file: c_0850_28.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00197.pdb # 2: usage_00457.pdb # 3: usage_00835.pdb # 4: usage_00836.pdb # 5: usage_00837.pdb # 6: usage_00838.pdb # 7: usage_00839.pdb # 8: usage_00840.pdb # 9: usage_00854.pdb # 10: usage_00855.pdb # # Length: 81 # Identity: 23/ 81 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 81 ( 46.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00197.pdb 1 ---TEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISK 57 usage_00457.pdb 1 EIEKLEIVKDHL----LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 56 usage_00835.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00836.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00837.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00838.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00839.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00840.pdb 1 ----------------LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAA 44 usage_00854.pdb 1 ----------------LPKQMEEHGLGRDKLQMNEEAMLKVIRQYTREAGVRNLNREAAN 44 usage_00855.pdb 1 ---TELEKLHIMRDYLLPKQMEEHGLGRDKLQMNEEAMLKVIRQYTREAGVRNLNREAAN 57 LPKQ ehgL Lq A l IR YTREAGVR L R a usage_00197.pdb 58 LCRKAVKQLLLDKSLKHIEIN 78 usage_00457.pdb 57 ICRKAAKAIVAEERKRITVT- 76 usage_00835.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00836.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00837.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00838.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00839.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00840.pdb 45 ICRKAAKAIVAEERKRITVT- 64 usage_00854.pdb 45 ICRKAARLIVSGEKKRVVVT- 64 usage_00855.pdb 58 ICRKAARLIVSGEKKRVVVT- 77 iCRKAa iv e kr vt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################