################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:32 2021 # Report_file: c_0693_59.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00109.pdb # 2: usage_00110.pdb # 3: usage_00458.pdb # 4: usage_00652.pdb # 5: usage_00743.pdb # # Length: 66 # Identity: 1/ 66 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 66 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 66 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 GIEEQEDVYFEL---P---SPKLLRVR--KINN--T---GKSYITYKEILDKRNEEF-Y- 45 usage_00110.pdb 1 GIEEQEDVYFEL---P---SPKLLRVR--KINN--T---GKSYITYKEILDKRNEEF-Y- 45 usage_00458.pdb 1 -----EDVYFEV---P---RPKLLRIR--GVHN--L---KKYYLTFKEILDENNEEF-Y- 40 usage_00652.pdb 1 -------R-VEE---D---EDFYLIIYKAPLFE--EDITTTSLGIYIKN---------NL 35 usage_00743.pdb 1 RKEIHEDIYYQHPCRDFSKTDEALRIR--IKRFNGH---NEVFLTYKG---------PL- 45 e Lr r tyk usage_00109.pdb 46 ELEFE- 50 usage_00110.pdb 46 ELEFE- 50 usage_00458.pdb 41 EVEFE- 45 usage_00652.pdb 36 LLTIHS 41 usage_00743.pdb 46 EIEVE- 50 e e e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################