################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:47 2021 # Report_file: c_0039_26.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00119.pdb # 2: usage_00120.pdb # 3: usage_00184.pdb # # Length: 271 # Identity: 72/271 ( 26.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 239/271 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/271 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 SRVVEYAEALLSKFDGALERLFLTNSGSEANELALRIARQHTGNTGVLVSDFSYHGNTTS 60 usage_00120.pdb 1 SRVVEYAEALLSKFDGALERLFLTNSGSEANELALRIARQHTGNTGVLVSDFSYHGNTTS 60 usage_00184.pdb 1 RPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGA 60 srVVeyAeaLlskfdgaLeRlfLtnsGsEaNElAlRiArqhTGntgvlvsdfSyHGnTts usage_00119.pdb 61 LAEITTGLTVH-E-PLGAHVRALRIPDVSGIAE------VDVPVLLEQSLADVDAAIASL 112 usage_00120.pdb 61 LAEITTGLTVH-E-PLGAHVRALRIPDVSGIAE------VDVPVLLEQSLADVDAAIASL 112 usage_00184.pdb 61 AASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAY----DYLAELDYAFDLIDRQS 116 lAeiTtgltvh e PlgahvrAlriPdvsgiae vlLeqsladvDaaiasl usage_00119.pdb 113 QAAGHGVSVFLFDPLFSTEGLLQLPSGYIEGVATRVRAAGGLVISDEVQSGFGRTGSGMW 172 usage_00120.pdb 113 QAAGHGVSVFLFDPLFSTEGLLQLPSGYIEGVATRVRAAGGLVISDEVQSGFGRTGSGMW 172 usage_00184.pdb 117 S--G-NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG-TMF 172 q G gvsvFlfdPlfSteGllqLPsGYiegvatrvrAaGgLvIsDEvQsGfGRTG gMw usage_00119.pdb 173 GYQMFNVEPELVTMGKPMGNGHPIGAVVTTAELLDEFGRHNM-FFNTFAGNPVSSAAGLA 231 usage_00120.pdb 173 GYQMFNVEPELVTMGKPMGNGHPIGAVVTTAELLDEFGRHNM-FFNTFAGNPVSSAAGLA 231 usage_00184.pdb 173 ACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLR 232 gyQmfnVePelvTmgKpmGnGhPigAvVTtAelldefgrhnm FfnTfagnPvssAaGLa usage_00119.pdb 232 VLRYMDQEDLMAKADQLGKYIRKRLENIAQR 262 usage_00120.pdb 232 VLRYMDQEDLMAKADQLGKYIRKRLENIAQR 262 usage_00184.pdb 233 VLDVVQRDGLVARANV--------------- 248 VLrymdqedLmAkAdq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################