################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:23 2021 # Report_file: c_0171_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00158.pdb # 2: usage_00174.pdb # 3: usage_00190.pdb # 4: usage_00191.pdb # 5: usage_00199.pdb # 6: usage_00200.pdb # 7: usage_00248.pdb # # Length: 182 # Identity: 65/182 ( 35.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/182 ( 39.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/182 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00158.pdb 1 --LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYD----------TF 48 usage_00174.pdb 1 -DYFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRN----------DK 49 usage_00190.pdb 1 -YLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQ 59 usage_00191.pdb 1 --LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRA---------GQ 49 usage_00199.pdb 1 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRH----------DK 50 usage_00200.pdb 1 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRH----------DK 50 usage_00248.pdb 1 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRN----------DK 50 K L G S VGKTs L Y D F F TVGIDF K usage_00158.pdb 49 KVHLQLWDTAGLERFRSLTTAFFRDAG-FLL-FDLTSQQSFLNVRNW-SQLQANAYCENP 105 usage_00174.pdb 50 RIKLQIWDTAGLERYRTITTAYYRGAG-FIL-YDITNEESFNAVQDWSTQIKTYS-WDNA 106 usage_00190.pdb 60 RIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYSENP 119 usage_00191.pdb 50 RIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYSENP 109 usage_00199.pdb 51 RVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYS-WDNA 109 usage_00200.pdb 51 RVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYS-WDNA 109 usage_00248.pdb 51 RIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNA 109 r LQ WDTAGlER R TTA R A F L D Tne SF V W Q N usage_00158.pdb 106 DIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIKRE-- 163 usage_00174.pdb 107 QVLLVGNKCD-EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKSE 165 usage_00190.pdb 120 DIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRME 179 usage_00191.pdb 110 DIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRME 169 usage_00199.pdb 110 QVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM- 168 usage_00200.pdb 110 QVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS 169 usage_00248.pdb 110 QVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK-- 167 L GNK D eD R e R LA G FE SA N E L D I usage_00158.pdb -- usage_00174.pdb 166 S- 166 usage_00190.pdb 180 RS 181 usage_00191.pdb 170 R- 170 usage_00199.pdb -- usage_00200.pdb -- usage_00248.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################