################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:58 2021 # Report_file: c_0545_54.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00116.pdb # 2: usage_00133.pdb # 3: usage_00176.pdb # 4: usage_00544.pdb # 5: usage_00601.pdb # # Length: 116 # Identity: 26/116 ( 22.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/116 ( 69.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/116 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNALNDKSACVRATAI 60 usage_00133.pdb 1 DPEKVEMYIKNLQDDSMRVRYNAATALGKI-G----DERAVEPLIKALKDEDGYVRLEAA 55 usage_00176.pdb 1 -PEKVEMYIKNLQDDSYYVRRAAAYALGKI-G----DERAVEPLIKALKDEDAWVRRAAA 54 usage_00544.pdb 1 DPEKVEMYIKNLQDDSSVVRVTAATALGKI-G----DERAVEPLIKALKDEDWQVRVSAA 55 usage_00601.pdb 1 ----VEMYIKNLQDDSYYVRRAAAYALGKI-G----DERAVEPLIKALKDEDAWVRRAAA 51 VemyIknlqDds vR aA aLGkI g deravepLikALkDed VR Aa usage_00116.pdb 61 ESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVI---ATIPLLINLL 113 usage_00133.pdb 56 EALGEIG-----DE-RAVEPLIKALKDEDPDVRSEAALALGKIGDERAVEPLIKAL 105 usage_00176.pdb 55 DALGQIG-----DE-RAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKAL 104 usage_00544.pdb 56 WALGKIG-----DE-RAVEPLIKALKDEDSDVRMAAAKALGKIGDERAVEPLIKAL 105 usage_00601.pdb 52 DALGQIG-----DE-RAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKAL 101 alg ig de raVEplikalkDed VR aA Alg I ravepLIkaL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################