################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:59 2021 # Report_file: c_1255_70.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00175.pdb # 2: usage_00802.pdb # 3: usage_01002.pdb # 4: usage_01253.pdb # 5: usage_01254.pdb # 6: usage_01255.pdb # 7: usage_01256.pdb # 8: usage_01257.pdb # 9: usage_01258.pdb # 10: usage_01259.pdb # 11: usage_01540.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 53 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 53 ( 58.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00175.pdb 1 ----GT-LR--AFTGFTQLQQR-VKEVITKQAAVHR--------C-NASVNLT 36 usage_00802.pdb 1 --DVFAVTGSNGKT-------TTKDMLAHLLSTRYK--------TY---K--- 30 usage_01002.pdb 1 -SMFITFEG--IDGS------G-KTTQSHLLAEYLSEIYGVNNV---VLTRE- 39 usage_01253.pdb 1 -GMLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNL-- 32 usage_01254.pdb 1 -GMLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNL-- 32 usage_01255.pdb 1 --MLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNLR- 32 usage_01256.pdb 1 --MLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNL-- 31 usage_01257.pdb 1 -GMLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNLR- 33 usage_01258.pdb 1 MGMLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNLR- 34 usage_01259.pdb 1 -GMLIAITG--TPGV------G-KTTIAKLLAEKLG--------Y-EYVNL-- 32 usage_01540.pdb 1 ---PIFMVG--ARGC------G-KTTVGRELARALG--------Y-EFVD--- 29 g k la #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################