################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:54 2021 # Report_file: c_1267_54.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00260.pdb # 2: usage_00302.pdb # 3: usage_00310.pdb # 4: usage_00367.pdb # 5: usage_00378.pdb # 6: usage_00739.pdb # 7: usage_00865.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 45 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 45 ( 17.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 DGILGLAYPSISAS--G--ATPVFDNLWDQGLVSQDLFSVYLSSN 41 usage_00302.pdb 1 QGILGVGRVETESANPP--YDNVPITLKKQGKIKTNAYSLYLN-- 41 usage_00310.pdb 1 DGILGLGFKEISVG--K--AVPVWYKMIEQGLVSDPVFSFWL--- 38 usage_00367.pdb 1 DGVVGMGFIEQAIG--R--VTPIFDNIISQGVLKEDVFSFYYN-- 39 usage_00378.pdb 1 DGILGLGYDTISVD--K--VVPPFYNAIQQDLLDEKRFAFYLGD- 40 usage_00739.pdb 1 NGILGLAYATLAKP--SSSLETFFDSLVTQAN-IPNVFSMQMC-- 40 usage_00865.pdb 1 DGILGLAYPSLASE--Y--SVPVFDNMMDRHLVARDLFSVYMDRN 41 GilG q fs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################