################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:20:29 2021 # Report_file: c_0178_2.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00018.pdb # 11: usage_00019.pdb # 12: usage_00020.pdb # 13: usage_00021.pdb # 14: usage_00022.pdb # 15: usage_00023.pdb # 16: usage_00025.pdb # 17: usage_00026.pdb # 18: usage_00027.pdb # 19: usage_00028.pdb # 20: usage_00029.pdb # 21: usage_00030.pdb # 22: usage_00031.pdb # 23: usage_00033.pdb # 24: usage_00034.pdb # 25: usage_00035.pdb # 26: usage_00036.pdb # 27: usage_00037.pdb # 28: usage_00039.pdb # 29: usage_00040.pdb # 30: usage_00041.pdb # 31: usage_00042.pdb # 32: usage_00043.pdb # # Length: 153 # Identity: 48/153 ( 31.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/153 ( 42.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/153 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -TVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAE 59 usage_00005.pdb 1 -TVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAE 59 usage_00006.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00007.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00012.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00013.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00014.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00015.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00016.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00018.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00019.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00020.pdb 1 ATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 60 usage_00021.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00022.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00023.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00025.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEM 59 usage_00026.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEM 59 usage_00027.pdb 1 -TVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEM 59 usage_00028.pdb 1 -TVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEM 59 usage_00029.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00030.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00031.pdb 1 -TIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKER 59 usage_00033.pdb 1 ATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 60 usage_00034.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00035.pdb 1 ATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQ 60 usage_00036.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00037.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00039.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00040.pdb 1 -TVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00041.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00042.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 usage_00043.pdb 1 -TIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK 59 T Ml TGTGiAPFR fLw MF E h dY G WL GVp LYk km usage_00004.pdb 60 NPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPID 119 usage_00005.pdb 60 NPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPID 119 usage_00006.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGID 119 usage_00007.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGID 119 usage_00012.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00013.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00014.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00015.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00016.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00018.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGID 119 usage_00019.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGID 119 usage_00020.pdb 61 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 120 usage_00021.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00022.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00023.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00025.pdb 60 APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00026.pdb 60 APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00027.pdb 60 APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00028.pdb 60 APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00029.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00030.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00031.pdb 60 APENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGID 119 usage_00033.pdb 61 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMMGLKGMEKGID 120 usage_00034.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMMGLKGMEKGID 119 usage_00035.pdb 61 YPDNFRYDKALSREQ-------MYVQDKIEEYSDEIFKLLDGG-AHIYFCGLKGMMPGIQ 112 usage_00036.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00037.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00039.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00040.pdb 60 APENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGID 119 usage_00041.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGID 119 usage_00042.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGID 119 usage_00043.pdb 60 APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGID 119 P NFR A SREQ Y Q r Y El e k t Ym GLKGM Id usage_00004.pdb 120 ETFTAEAEKRGLNWEEMRRSMKKEHRWHVEV-- 150 usage_00005.pdb 120 ETFTAEAEKRGLNWEEMRRSMKKEHRWHVE--- 149 usage_00006.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVLV-- 150 usage_00007.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVQV-- 150 usage_00012.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00013.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00014.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00015.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVE--- 149 usage_00016.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVE--- 149 usage_00018.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVE--- 149 usage_00019.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVAV-- 150 usage_00020.pdb 121 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 150 usage_00021.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00022.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00023.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00025.pdb 120 DIMLDLAAKDGINWLDYKKQLKKSEQWNVE--- 149 usage_00026.pdb 120 DIMLDLAAKDGINWLDYKKQLKKSEQWNVEV-- 150 usage_00027.pdb 120 DIMLNLAAKDGIDWMQYKKQLKKGEQWNVE--- 149 usage_00028.pdb 120 DIMLNLAAKDGIDWMQYKKQLKKGEQWNVE--- 149 usage_00029.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00030.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00031.pdb 120 DIMVSLAEKDGIDWFDYKKQLKRGDQWNVE--- 149 usage_00033.pdb 121 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY- 152 usage_00034.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00035.pdb 113 DTLKKVAERRGESWDQKLAQLKKNKQWHVE--- 142 usage_00036.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVE--- 149 usage_00037.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVYL 152 usage_00039.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00040.pdb 120 DIMVSLAAKDGIDWIEYKRTLKKAEQWNVEV-- 150 usage_00041.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVE--- 149 usage_00042.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVE--- 149 usage_00043.pdb 120 DIMVSLAAAEGIDWIEYKRQLKKAEQWNVE--- 149 A G W K W V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################