################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:28 2021 # Report_file: c_1137_19.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00025.pdb # 2: usage_00243.pdb # 3: usage_00507.pdb # 4: usage_00508.pdb # 5: usage_00509.pdb # 6: usage_00510.pdb # 7: usage_00540.pdb # 8: usage_00541.pdb # 9: usage_00542.pdb # 10: usage_00676.pdb # # Length: 65 # Identity: 15/ 65 ( 23.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 65 ( 38.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 65 ( 12.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 NLHTINQFFSKTC-SPDEARALIAEKGDSTIA--DPQTFEEEALRFIGKELYEAFFKGYT 57 usage_00243.pdb 1 NMNTFHQMW-G-VKDPQEAQNIINAQKK-KYGDKVPENLEEQAISLVGEDLYQALIKGYT 57 usage_00507.pdb 1 GLGLVSQFFGRYF-SPDEARALIAEQAS-EIDTKDAKNFEEKAISLVGRPLYEAFIKHYT 58 usage_00508.pdb 1 GLGLINQFFGRYY-TPDEARELIKEQSA-EIDSKDATNLEEKAISLIGRPLYEAFIRDYT 58 usage_00509.pdb 1 GLGLINQFFGRYY-TPDEARELIKEQSA-EIDSKDATNLEEKAISLIGRPLYEAFIRDYT 58 usage_00510.pdb 1 GLGLVSQFFGRYF-SPDEARALIAEQAS-EIDTKDAKNFEEKAISLVGRPLYEAFIKHYT 58 usage_00540.pdb 1 GLGLVSQFFGKYF-TPEQARQLIAEQAA-EIDTADAQNLEEKAISLIGRPLYEAFVKGYT 58 usage_00541.pdb 1 GLGLVSQFFGKYF-TPEQARQLIAEQAA-EIDTADAQNLEEKAISLIGRPLYEAFVKGYT 58 usage_00542.pdb 1 GLGLVSQFFGKYF-TPEQARQLIAEQAA-EIDTADAQNLEEKAISLIGRPLYEAFVKGYT 58 usage_00676.pdb 1 NLHTINQFFSKTC-SPDEARALIAEKGDSTIA--DPQTFEEEALRFIGKELYEAFFKGYT 57 l Qff P Ar lI e i d EE A G LYeAf YT usage_00025.pdb 58 IKQWG 62 usage_00243.pdb 58 EKQW- 61 usage_00507.pdb 59 AKQW- 62 usage_00508.pdb 59 AKQ-- 61 usage_00509.pdb 59 AKQW- 62 usage_00510.pdb 59 AKQW- 62 usage_00540.pdb 59 AKQ-- 61 usage_00541.pdb 59 AKQ-- 61 usage_00542.pdb 59 AKQ-- 61 usage_00676.pdb 58 IKQWG 62 KQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################