################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:23 2021 # Report_file: c_0398_9.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00399.pdb # 2: usage_00402.pdb # 3: usage_00403.pdb # 4: usage_00404.pdb # 5: usage_00405.pdb # 6: usage_00406.pdb # 7: usage_00407.pdb # 8: usage_00408.pdb # 9: usage_00409.pdb # 10: usage_00410.pdb # 11: usage_00411.pdb # 12: usage_00412.pdb # 13: usage_00413.pdb # 14: usage_00414.pdb # 15: usage_00415.pdb # 16: usage_00416.pdb # 17: usage_00417.pdb # 18: usage_00804.pdb # 19: usage_00805.pdb # # Length: 164 # Identity: 7/164 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/164 ( 4.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 91/164 ( 55.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00399.pdb 1 GFATYRNTDFFGL-VDGLNFAVQYQGQNGSVSGENDPDFTGHGITNN----GRKALRQN- 54 usage_00402.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00403.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00404.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00405.pdb 1 -GVGGSITY----NYEGFGIGAAVSSSKRTW----------------DQNNTGLIGT--G 37 usage_00406.pdb 1 -GVGGSITY----NYEGFGIGAAVSSSKRTW----------------DQNNTGLIGT--G 37 usage_00407.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00408.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00409.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00410.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00411.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00412.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00413.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00414.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00415.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00416.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00417.pdb 1 GFATYRNTDFFGL-VDGLDFAVQYQGKNGSAH--------GEGMTTN---GRDDVFEQN- 47 usage_00804.pdb 1 GYATYRNTDFFGL-VDGLDFALQYQGK--------------------------------- 26 usage_00805.pdb 1 GYATYRNTDFFGL-VDGLDFALQYQGK--------------------------------- 26 T G usage_00399.pdb 55 --GDGVGGSITYD-YEGFGVGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 105 usage_00402.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00403.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00404.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00405.pdb 38 DRAETYTGGLKYD-ANNIYLAAQYTQTYN-------ATRVGSLGWANKAQ--NFEAVAQY 87 usage_00406.pdb 38 DRAETYTGGLKYD-ANNIYLAAQYTQTYN-------ATRVGSLGWANKAQ--NFEAVAQY 87 usage_00407.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00408.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00409.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00410.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00411.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00412.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00413.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00414.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00415.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00416.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00417.pdb 48 --GDGVGGSITYN-YEGFGIGAAVSSSKRTWDQNNT--G-LIGTGD-RAE--TYTGGLKY 98 usage_00804.pdb 27 --GDGYGGSLTYAIGEGFSVGGAITTSK----------------------ATVYTGGLKY 62 usage_00805.pdb 27 --GDGYGGSLTYAIGEGFSVGGAITTSK----------------------ATVYTGGLKY 62 G Y Y usage_00399.pdb 106 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 146 usage_00402.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00403.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00404.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00405.pdb 88 QFDFGLRPFLAYLQSKGKNLGR-----GYDDEDIL--------- 117 usage_00406.pdb 88 QFDFGLRPFLAYLQSKGKNLGR-----GYDDEDIL--------- 117 usage_00407.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00408.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00409.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00410.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00411.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00412.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00413.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00414.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00415.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00416.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00417.pdb 99 DAN---NIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFD 139 usage_00804.pdb 63 DAN---NIYLAAQYSQTY-------------AQNFEVVAQYQFD 90 usage_00805.pdb 63 DAN---NIYLAAQYSQTY-------------AQNFEVVAQYQFD 90 LA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################