################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:19 2021 # Report_file: c_1103_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00159.pdb # 2: usage_00216.pdb # 3: usage_00220.pdb # 4: usage_00229.pdb # 5: usage_00230.pdb # 6: usage_00231.pdb # 7: usage_00232.pdb # 8: usage_00248.pdb # 9: usage_00264.pdb # 10: usage_00265.pdb # 11: usage_00314.pdb # 12: usage_00315.pdb # 13: usage_00360.pdb # # Length: 113 # Identity: 60/113 ( 53.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/113 ( 53.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/113 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00159.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00216.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00220.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00229.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00230.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00231.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00232.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00248.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00264.pdb 1 LTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 60 usage_00265.pdb 1 -TPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 59 usage_00314.pdb 1 --PLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKN 58 usage_00315.pdb 1 --PLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKN 58 usage_00360.pdb 1 ---FLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN 57 LLR L QLQ KD IF PV L EVPDYLDHIK PMDF TM LEA Y N usage_00159.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAE----- 107 usage_00216.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEK---- 108 usage_00220.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEK---- 108 usage_00229.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 94 usage_00230.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 94 usage_00231.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 94 usage_00232.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 94 usage_00248.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 94 usage_00264.pdb 61 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 95 usage_00265.pdb 60 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGG---------------- 96 usage_00314.pdb 59 LHEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSIGL- 110 usage_00315.pdb 59 LHEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSIGLE 111 usage_00360.pdb 58 FDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ------------------ 92 FEEDF LI NC KYNA DT FYRAAVRLR Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################