################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:42 2021 # Report_file: c_0885_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00034.pdb # 2: usage_00047.pdb # 3: usage_00048.pdb # 4: usage_00049.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00054.pdb # 9: usage_00070.pdb # 10: usage_00071.pdb # 11: usage_00096.pdb # 12: usage_00160.pdb # 13: usage_00161.pdb # # Length: 134 # Identity: 68/134 ( 50.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/134 ( 50.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/134 ( 38.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 KADEKYFISHILA-FFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 59 usage_00047.pdb 1 ---------------------------VERFSQEVQVPEARCFYGFQILIENVHSEMYSL 33 usage_00048.pdb 1 -----------------ASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSL 43 usage_00049.pdb 1 KPDERHFISHVLA-FFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSL 59 usage_00051.pdb 1 KPEERYFISHVLA-FFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 59 usage_00052.pdb 1 KPEERYFISHVLA-FFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 59 usage_00053.pdb 1 -PEERYFISHVLA-FFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 58 usage_00054.pdb 1 KPEERYFISHVLA-FFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 59 usage_00070.pdb 1 -----------------ASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSL 43 usage_00071.pdb 1 -----------------ASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSL 43 usage_00096.pdb 1 KPDERHFISHVLA-FFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSL 59 usage_00160.pdb 1 KADEKYFISHILA-FFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE-YSL 58 usage_00161.pdb 1 -------------IVNENL--------VERFSQEVQVPEARCFYGFQILIENVHSE-YSL 38 VERFSQEVQ EARCFYGFQI EN HSE YSL usage_00034.pdb 60 LIDTYIRDPKKREFLFNA-I---MPYVKKKADWALRWIADRKSTFGERVVAFAAVE---- 111 usage_00047.pdb 34 LIDTYIRDPKKREFLFNA-IET-MPYVKKKADWALRWIADRKSTFGERVVAFAAVE---- 87 usage_00048.pdb 44 LIDTYIKDPKEREYLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 101 usage_00049.pdb 60 LIDTYIKDPKEREYLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 117 usage_00051.pdb 60 LIDTYIKDPKEREFLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 117 usage_00052.pdb 60 LIDTYIKDPKEREFLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 117 usage_00053.pdb 59 LIDTYIKDPKEREFLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 116 usage_00054.pdb 60 LIDTYIKDPKEREFLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 117 usage_00070.pdb 44 LIDTYIKDPKEREYLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 101 usage_00071.pdb 44 LIDTYIKDPKEREYLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVE---- 97 usage_00096.pdb 60 LIDTYIKDPKEREYLFNAIE-T-MPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIF- 116 usage_00160.pdb 59 LIDTYIRDPKKREFLFNAIE-T--PYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFF 115 usage_00161.pdb 39 LIDTYIRDPKKREFLFNA---IETPYVKKKADWALRWIADRKSTFGERVVAFAAVE---- 91 LIDTYI DPK RE LFNA P VKKKADWALRWI D T GERVVAFAAVE usage_00034.pdb -------------- usage_00047.pdb -------------- usage_00048.pdb 102 SGSFASIFWLKKRG 115 usage_00049.pdb 118 S------------- 118 usage_00051.pdb 118 S------------- 118 usage_00052.pdb 118 S------------- 118 usage_00053.pdb 117 SGSFASIFWLKKRG 130 usage_00054.pdb 118 S------------- 118 usage_00070.pdb 102 SGSFASIFWLKKR- 114 usage_00071.pdb -------------- usage_00096.pdb -------------- usage_00160.pdb 116 S------------- 116 usage_00161.pdb -------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################