################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:03 2021 # Report_file: c_1335_75.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00027.pdb # 2: usage_00375.pdb # 3: usage_00548.pdb # 4: usage_00549.pdb # 5: usage_00694.pdb # 6: usage_00883.pdb # 7: usage_00884.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 61 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 61 ( 52.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 S-------AKA----LDAFLLEQVARAKAEGILFSAHLKATMMKVSDPIIF--GHVVRAY 47 usage_00375.pdb 1 --------KKA----LIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVF--GHAVKVF 46 usage_00548.pdb 1 S-------KNA----LRNFIAAEIEDAKKQGVLLSVHLKATMMKVSDPIMF--GQIVSEF 47 usage_00549.pdb 1 S-------KNA----LRNFIAAEIEDAKKQGVLLSVHLKATMMKVSDPIMF--GQIVSEF 47 usage_00694.pdb 1 -DKALREAVMAQVGTRKGDLERF--------NG-TLRLDNPAI--------QSLEGLNKF 42 usage_00883.pdb 1 --------AKA----LDAFLLEQVARAKAEGILFSAHLKATMMKVSDPIIF--GHVVRAY 46 usage_00884.pdb 1 --------AKA----LDAFLLEQVARAKAEGILFSAHLKATMMKVSDPIIF--GHVVRAY 46 A l f s hlkatmm g v usage_00027.pdb 48 F 48 usage_00375.pdb 47 Y 47 usage_00548.pdb - usage_00549.pdb - usage_00694.pdb - usage_00883.pdb 47 F 47 usage_00884.pdb 47 F 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################