################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:39:50 2021 # Report_file: c_0840_109.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00110.pdb # 2: usage_00111.pdb # 3: usage_00349.pdb # 4: usage_00839.pdb # 5: usage_00840.pdb # 6: usage_00841.pdb # 7: usage_00946.pdb # 8: usage_00947.pdb # 9: usage_00948.pdb # 10: usage_00949.pdb # 11: usage_00950.pdb # 12: usage_00951.pdb # 13: usage_00952.pdb # 14: usage_00953.pdb # 15: usage_00954.pdb # 16: usage_00955.pdb # 17: usage_01057.pdb # 18: usage_01058.pdb # 19: usage_01108.pdb # 20: usage_01115.pdb # 21: usage_01116.pdb # 22: usage_01117.pdb # 23: usage_01118.pdb # 24: usage_01194.pdb # 25: usage_01195.pdb # 26: usage_01196.pdb # 27: usage_01197.pdb # # Length: 86 # Identity: 43/ 86 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 86 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 86 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00110.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00111.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00349.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00839.pdb 1 -PDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENS 59 usage_00840.pdb 1 -PDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENS 59 usage_00841.pdb 1 -PDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENS 59 usage_00946.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00947.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00948.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00949.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00950.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00951.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00952.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00953.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00954.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_00955.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01057.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01058.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01108.pdb 1 TPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 60 usage_01115.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01116.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01117.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01118.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01194.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01195.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01196.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 usage_01197.pdb 1 -PDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDS 59 PD I E D G GVLLIIKNY GD NFE A E KV DDD AV S usage_00110.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00111.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00349.pdb 60 LYTAGRRGVANTVLIEKLVGAAAERG 85 usage_00839.pdb 60 LYTQGRRGVAGTVLVHKILGAAAHQ- 84 usage_00840.pdb 60 LYTQGRRGVAGTVLVHKILGAAAHQ- 84 usage_00841.pdb 60 LYTQGRRGVAGTVLVHKILGAAAHQ- 84 usage_00946.pdb 60 LYTAGRRGVANTVLIEKLVGAAAER- 84 usage_00947.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00948.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00949.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00950.pdb 60 LYTAGRRGVANTVLIEKLVGAAAERG 85 usage_00951.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00952.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00953.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_00954.pdb 60 LYTAGRRGVANTVLIEKLVGAAAERG 85 usage_00955.pdb 60 LYTAGRRGVANTVLIEKLVGAAAER- 84 usage_01057.pdb 60 LYTAGRRGVANTVLIEKLVGAAAERG 85 usage_01058.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01108.pdb 61 LYTAGRRGVANTVLIEKLVGAAAERG 86 usage_01115.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01116.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01117.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01118.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01194.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 usage_01195.pdb 60 LYTAGRRGVANTVLIEKLVGAAAERG 85 usage_01196.pdb 60 LYTAGRRGVANTVLIEKLVGAAAER- 84 usage_01197.pdb 60 LYTAGRRGVANTVLIEKL-------- 77 LYT GRRGVA TVL K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################