################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:32 2021 # Report_file: c_0994_87.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00023.pdb # 2: usage_00334.pdb # 3: usage_00598.pdb # 4: usage_00730.pdb # 5: usage_00822.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 65 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 65 ( 50.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -TSVKVFSG---RSSSGLLEWD-SKSDALETLGFLNHYQKN--------P-NGPYPYTLK 46 usage_00334.pdb 1 --LERYN--G-LPSMEILGQAAPGK-STGEAMELME-----QLASKLP----T----GVG 41 usage_00598.pdb 1 RGIAELN--GEGEVAGGVVILRSGK-NAREVIAAVK-----DKLETLKSSLPE----GVE 48 usage_00730.pdb 1 DIIAEFN--G-QPASGLGIKLATGA-NALDTAAAIR-----AELAKMEPFFPS----GLK 47 usage_00822.pdb 1 DIIAEFN--G-QPASGLGIKLATGA-NALDTAAAIR-----AELAKMEPFFPS----GLK 47 n g a g usage_00023.pdb 47 LCF-- 49 usage_00334.pdb 42 YDW-- 44 usage_00598.pdb 49 I---- 49 usage_00730.pdb 48 IVYPY 52 usage_00822.pdb 48 IVYPY 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################