################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:34 2021 # Report_file: c_0466_8.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00003.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00051.pdb # 5: usage_00084.pdb # 6: usage_00085.pdb # 7: usage_00101.pdb # 8: usage_00116.pdb # 9: usage_00117.pdb # 10: usage_00141.pdb # 11: usage_00143.pdb # 12: usage_00144.pdb # # Length: 81 # Identity: 35/ 81 ( 43.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 81 ( 65.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 81 ( 4.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -TILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKKIIASYV 59 usage_00011.pdb 1 ATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 60 usage_00012.pdb 1 --VLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 58 usage_00051.pdb 1 --ILFGGFGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYV 58 usage_00084.pdb 1 --VLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKR-ISSYV 57 usage_00085.pdb 1 --VLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKR-ISSYV 57 usage_00101.pdb 1 -TLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLGLLLANKQIKKMIASYV 59 usage_00116.pdb 1 -TVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 59 usage_00117.pdb 1 -TVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 59 usage_00141.pdb 1 ATVLVGGFGLSGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 60 usage_00143.pdb 1 --VLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 58 usage_00144.pdb 1 --VLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYV 58 l GGFGlcGIPE I GvK lt VSNN GVD GLG Ll KQik I SYV usage_00003.pdb 60 GENKIFESQLNGE-IEVVLTP 79 usage_00011.pdb 61 GENAEFERQYLAGELEVELTP 81 usage_00012.pdb 59 GENAEFERQYLAGELEVELTP 79 usage_00051.pdb 59 GENTELVRQYLEGELAVELTP 79 usage_00084.pdb 58 GENAEFERQYLAGELEVELTP 78 usage_00085.pdb 58 GENAEFERQYLAGELEVELTP 78 usage_00101.pdb 60 GENKIFERQFLSGELEVELVP 80 usage_00116.pdb 60 GENAEFERQYLAGELEVELTP 80 usage_00117.pdb 60 GENAEFERQYLAGELEVELTP 80 usage_00141.pdb 61 GENAEFERQYLAGELEVELTP 81 usage_00143.pdb 59 GENAEFERQYLAGELEVELTP 79 usage_00144.pdb 59 GENAEFERQYLAGELEVELTP 79 GEN ferQ l g leVeLtP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################