################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:31 2021 # Report_file: c_1032_43.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00425.pdb # 2: usage_00426.pdb # 3: usage_00427.pdb # 4: usage_00428.pdb # 5: usage_00437.pdb # 6: usage_00438.pdb # 7: usage_00439.pdb # 8: usage_00474.pdb # 9: usage_00686.pdb # # Length: 57 # Identity: 7/ 57 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 57 ( 28.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 57 ( 35.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00425.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGADRRS-GEFASWRLKE----LG 46 usage_00426.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGAD--------SWRLKE----LG 39 usage_00427.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGAD--------SWRLKE----LG 39 usage_00428.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGADRRS-GEFASWRLKE----LG 46 usage_00437.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGADR------ASWRLKE----LG 41 usage_00438.pdb 1 -KRALITGIRGQDGAYLAKLLLEK-----GYEVYGADRRS-GEFASWRLKE----LG 46 usage_00439.pdb 1 GKRALITGIRGQDGAYLAKLLLEK-----GYEVYGAD----GEFASWRLKE----LG 44 usage_00474.pdb 1 --VALVVGVTGIVGSSLAEVLKLPDTPGGPWKVYGVARRPC----PVWLAKK----P 47 usage_00686.pdb 1 -KKALVTGGSRGVGRGVVLALARA-----GVDVFTCYREE-SDA-SASLARELKQLG 49 AL tG g G la L g Vyg s L g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################