################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:12 2021 # Report_file: c_0668_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00010.pdb # 3: usage_00025.pdb # 4: usage_00166.pdb # 5: usage_00443.pdb # 6: usage_00487.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 58 ( 5.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 58 ( 53.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---PTATVT-PS----SGLSDGTVVKVAGAGLQAGTAYDVG-QCAWVD-TGVLAC--- 45 usage_00010.pdb 1 -----------------GLSDGTVVKVAGAGLQAGTAYDVG-QCAWVD-TGVLAC--- 36 usage_00025.pdb 1 NTFLYFNVR-GEGS---------DTVITVEG--G-GVNATVIQADVAQ-TNGYVHIID 44 usage_00166.pdb 1 -AAPTATVT-PS----SGLSDGTVVKVAGAGLQAGTAYDVG-QCAWVD-TGVLAC--N 48 usage_00443.pdb 1 ---GVIITNDH---VIRNA----SLITVTLQ--DGRRLKAR-LIGGDSETDLAVLKID 45 usage_00487.pdb 1 ---PTATVT-PS----SGLSDGTVVKVAGAGLQAGTAYDVG-QCAWVD-TGVLAC--N 46 g q T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################