################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:54 2021 # Report_file: c_0129_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00019.pdb # 3: usage_00086.pdb # 4: usage_00113.pdb # 5: usage_00114.pdb # 6: usage_00118.pdb # 7: usage_00119.pdb # # Length: 199 # Identity: 28/199 ( 14.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/199 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/199 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --IILVTGASDGIGREAA-TYARYG---ATVILLGRNEEKLRQVASHINEETG-RQPQWF 53 usage_00019.pdb 1 ---ILVTGASDGIGREAAMTYARYG---ATVILLGRNEEKLRQVASHINEETG-RQPQWF 53 usage_00086.pdb 1 --IILVTGASDGIGREAAMTYARYG---ATVILLGRNEEKLRQVASHINEETG-RQPQWF 54 usage_00113.pdb 1 GRLALVTGASRGIGYFLSLELAKRG---AHVIAVARTVGGLEELDDEIRKL-G-SSATLV 55 usage_00114.pdb 1 --VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA 58 usage_00118.pdb 1 ---ILVTGASDGIGREAALTYARYG---ATVILLGRNEEKLRRVAQHIADEQH-VQPQWF 53 usage_00119.pdb 1 ---ILVTGASDGIGREAALTYARYG---ATVILLGRNEEKLRRVAQHIADEQH-VQPQWF 53 lvTGAS GiGr a Ar g a vi R e Lr i usage_00001.pdb 54 ILDLLTCTSENCQQLAQRIVVN--YPRL--DGVLHNAGLLGDVCP--SE-QNPQVWQDV- 105 usage_00019.pdb 54 ILDLLTCTSEDCQQLAQRIAVN--YPRL--DGVLHNAGLLGDVCPM-SE-QDPQVWQDVM 107 usage_00086.pdb 55 ILDLLTCTSENCQQLAQRIVVN--YPRL--DGVLHNAGLLGDVCPM-SE-QNPQVWQDVM 108 usage_00113.pdb 56 PLDIT--DMEALDRLGGTIHER--WGKL--DILVANAGILGTISPI-GH-VEAKTFEKVM 107 usage_00114.pdb 59 AADLG--TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 116 usage_00118.pdb 54 TLDLLTCTAEECRQVADRIAAH--YPRL--DGVLHNAGLLGEIGP--SE-QDPQIWQDV- 105 usage_00119.pdb 54 TLDLLTCTAEECRQVADRIAAH--YPRL--DGVLHNAGLLGEIGP--SE-QDPQIWQDV- 105 lDl t e i L d NAg LG p v usage_00001.pdb 106 QINVNATF-LTQALLPLLLKS----DAGSLVFTSSSVGRQGRANWGAYAASKFATEG--Q 158 usage_00019.pdb 108 QVNVNATFMLTQALLPLLLKS----DAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ 163 usage_00086.pdb 109 QINVNATFMLTQALLPLLLKS----DAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ 164 usage_00113.pdb 108 NINVTSVWRLIRSVDPLLRAS----DAGRAIMLSSGVAHSCRAFWGPYAASKAAVEVMAR 163 usage_00114.pdb 117 ALNLTSMLCLTSGTLNAF-Q-DSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 174 usage_00118.pdb 106 QVNVNATF-LTQALLPLLLKS----DAGSLVFTSSSVGRQGRANWGAYATSKFATEG--Q 158 usage_00119.pdb 106 QVNVNATF-LTQALLPLLLKS----DAGSLVFTSSSVGRQGRANWGAYATSKFATEG--Q 158 Nv Lt lpll dag v SS v q ra WG Ya sK A e q usage_00001.pdb 159 VLADEYQQR-LRVNCINPG 176 usage_00019.pdb 164 VLADEYQQR-LRVNCINPG 181 usage_00086.pdb 165 VLADEYQQR-LRVNCINPG 182 usage_00113.pdb 164 CWAEETKKMKLKINSVNPG 182 usage_00114.pdb 175 VLAAEEP-S-VRVLSYAPG 191 usage_00118.pdb 159 VLADEYQNRSLRVNCINPG 177 usage_00119.pdb 159 VLADEYQNRSLRVNCINPG 177 vlA E lrvn nPG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################