################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:00 2021 # Report_file: c_0615_28.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00075.pdb # 3: usage_00123.pdb # 4: usage_00124.pdb # 5: usage_00125.pdb # 6: usage_00136.pdb # # Length: 114 # Identity: 65/114 ( 57.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/114 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/114 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---FPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAK 57 usage_00075.pdb 1 SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 60 usage_00123.pdb 1 --SFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 58 usage_00124.pdb 1 --SFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 58 usage_00125.pdb 1 SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 60 usage_00136.pdb 1 -YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 59 FvAmAKAcrsMLnpgsaLLTLSYLGAERAIPNYNvMGLAKAsLEAnVRYmAnamGpe usage_00004.pdb 58 GVRVNAISAGPIKS--------FGKILDFVESNSPLKRNVTIEQVGNAGAFLLS 103 usage_00075.pdb 61 GVRVNAISAGPIRT--------FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC- 105 usage_00123.pdb 59 GVRVNAISAGPIRT-------DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 105 usage_00124.pdb 59 GVRVNAISAGPIRT---------RKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 103 usage_00125.pdb 61 GVRVNAISAGPIRT--------FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 106 usage_00136.pdb 60 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 113 GVRVNAISAGPIrt rKmLahcEavtPirRtVTIEdVGNsaAFLc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################