################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:31 2021 # Report_file: c_1370_225.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00009.pdb # 2: usage_00142.pdb # 3: usage_00196.pdb # 4: usage_00647.pdb # 5: usage_01736.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 41 ( 2.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 41 ( 58.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 TVEELRNIIGM--DKPL-----SLPGFLAKFDYYMPV-IA- 32 usage_00142.pdb 1 -----QDIIAILGMD--EL--SEQDKLTVERARKIQR-F-L 30 usage_00196.pdb 1 TVEELRNIIGM--DKPL-----SQPGTLAKWDYYMPV-I-- 31 usage_00647.pdb 1 ----AEEMIGKLTGMPI-----PLNSLRQWILG-------- 24 usage_01736.pdb 1 ----NQEEERQLR------ETKEQEELNDAVGFSRVIHAIA 31 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################