################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:28 2021 # Report_file: c_0712_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00024.pdb # 6: usage_00029.pdb # 7: usage_00042.pdb # 8: usage_00043.pdb # 9: usage_00044.pdb # # Length: 55 # Identity: 3/ 55 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 55 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 55 ( 38.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --AIIYTVELKRY-GGPLGITISGT-E------EP-FDPIIISSLTKGGLAERTG 44 usage_00002.pdb 1 KEPEIITVTLKKQ-N-GMGLSIVAAKGAG-----QDKLGIYVKSVVKGGAADVDG 48 usage_00004.pdb 1 ---ELFPVELEKD-SEGLGISIIGMGA-GADMGLE-KLGIFVKTVTEGGAAHRDG 49 usage_00005.pdb 1 ---ELFPVELEKD-SEGLGISIIGMGA-GADMGLE-KLGIFVKTVTEGGAAHRDG 49 usage_00024.pdb 1 ---EPRHVKVQKG-SEPLGISIVSGEK----------GGIYVSKVTVGSIAHQAG 41 usage_00029.pdb 1 -IGKRLNIQLKKG-TEGLGFSITSRDVTI----GG-SAPIYVKNILPRGAAIQDG 48 usage_00042.pdb 1 ------TVTLNEKY-NFLGISIVGQSN----------GGIYIGSI-KGGAVAADG 37 usage_00043.pdb 1 ---HVEVFELLKPPSGGLGFSVVGLRSEN-------ELGIFVQEIQEGSVAHRDG 45 usage_00044.pdb 1 ---HVEVFELLKPPSGGLGFSVVGLRSE--------ELGIFVQEIQEGSVAHRDG 44 l lG s I g a G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################