################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:51:54 2021 # Report_file: c_0131_2.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00001.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00087.pdb # 5: usage_00088.pdb # 6: usage_00089.pdb # 7: usage_00090.pdb # 8: usage_00091.pdb # 9: usage_00092.pdb # 10: usage_00093.pdb # 11: usage_00094.pdb # 12: usage_00095.pdb # 13: usage_00096.pdb # 14: usage_00097.pdb # 15: usage_00098.pdb # 16: usage_00099.pdb # 17: usage_00100.pdb # 18: usage_00101.pdb # 19: usage_00117.pdb # 20: usage_00124.pdb # 21: usage_00125.pdb # 22: usage_00126.pdb # 23: usage_00127.pdb # # Length: 188 # Identity: 27/188 ( 14.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/188 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/188 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NVIKTGML-TAAAIEVLHEKLLQLGENRPKLVVDPVL-V----------A----KDIVSL 44 usage_00030.pdb 1 -AVKIGMVSSPEIILEIVENLKKY--NPKYLVVDPVM-ISK--SGYYLL----KPEAKEN 50 usage_00031.pdb 1 RAVKIGMVSSPEIILEIVENLKKY--NPKYLVVDPVM-I-Y----L-L-----KPEAKEN 46 usage_00087.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CKGEDEVL-----NPGNTEA 50 usage_00088.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CKGEDEVL-----NPGNTEA 50 usage_00089.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V------EVL-----NPGNTEA 45 usage_00090.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CK--DEVL-----NPGNTEA 48 usage_00091.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CK--DEVL-----NPGNTEA 48 usage_00092.pdb 1 DAIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVMEV--------L-----NPGNTEA 45 usage_00093.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CKGEDEVL-----NPGNTEA 50 usage_00094.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V----------CKGENPGNTEA 46 usage_00095.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-----DEVL-----NPGNTEA 46 usage_00096.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V----------CKG-NPGNTEA 45 usage_00097.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V----------CKG-NPGNTEA 45 usage_00098.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CK---EVL-----NPGNTEA 47 usage_00099.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CKGEDEVL-----NPGNTEA 50 usage_00100.pdb 1 DAIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CD---EVL-----NPGNTEA 48 usage_00101.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V-CK---EVL-----NPGNTEA 47 usage_00117.pdb 1 DAMKTGMLPTVDIIELAAKTIKEK--QLKNVVIDPVM-V-CKGANEVL-----YPEHAQA 51 usage_00124.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM----------L-----NPGNTEA 42 usage_00125.pdb 1 -AIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V--------L-----NPGNTEA 43 usage_00126.pdb 1 DAIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM----------------NPGNTEA 42 usage_00127.pdb 1 DAIKTGMLGTEEIIKRAGEVYEAS--NAQYFVVDPVM-V--------C-----NPGNTEA 44 a K GM iI e n VvDPVm p usage_00001.pdb 45 ITEKVAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGG---- 100 usage_00030.pdb 51 LIKYLIPLAYIITPNIPEAEEITGI-K-IHNVDDMKRVGEEILQL-GPKFVLMKGGH--L 105 usage_00031.pdb 47 LIKYLIPLAYIITPNIPEAEEITGI-K-IHNVDDMKRVGEEILQL-GPKFVLMKGG---- 99 usage_00087.pdb 51 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 108 usage_00088.pdb 51 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 108 usage_00089.pdb 46 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 103 usage_00090.pdb 49 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 106 usage_00091.pdb 49 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 106 usage_00092.pdb 46 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 103 usage_00093.pdb 51 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 108 usage_00094.pdb 47 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGG---- 100 usage_00095.pdb 47 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 104 usage_00096.pdb 46 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 103 usage_00097.pdb 46 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 103 usage_00098.pdb 48 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 105 usage_00099.pdb 51 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 108 usage_00100.pdb 49 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 106 usage_00101.pdb 48 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 105 usage_00117.pdb 52 LREQLAPLATVITPNLFEASQLSGMDE-LKTVDDMIEAAKKIHAL-GAQYVVITGGGKLK 109 usage_00124.pdb 43 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 100 usage_00125.pdb 44 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 101 usage_00126.pdb 43 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 100 usage_00127.pdb 45 MIKYLLPKATVVTPNLFEAGQLSGLGK-LNSIEDMKKAATIIFDK-GAQHVIIKGGKALD 102 l P A TPN Ea G Dm i g v kGG usage_00001.pdb 101 --HITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEY 158 usage_00030.pdb 106 DGEAVDILVGK--NIFKVYKSE----------GCTLSSAITSYLALGYEITEAVNLSKIY 153 usage_00031.pdb 100 ---AVDILVGK--NIFKVYKS-----------GCTLSSAITSYLALGYEITEAVNLSKIY 143 usage_00087.pdb 109 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 166 usage_00088.pdb 109 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 166 usage_00089.pdb 104 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 161 usage_00090.pdb 107 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 164 usage_00091.pdb 107 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 164 usage_00092.pdb 104 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 161 usage_00093.pdb 109 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 166 usage_00094.pdb 101 --KSYDLYYDG--QTFYQLTTDMF-S-YNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 154 usage_00095.pdb 105 QDKSYDLYYDG--QTFYQLTTDMF-QSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 161 usage_00096.pdb 104 QDKSYDLYYDG--QTFYQLTTDMF-Q-YNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 159 usage_00097.pdb 104 QDKSYDLYYDG--QTFYQLTTDMF-Q-YNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 159 usage_00098.pdb 106 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 163 usage_00099.pdb 109 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 166 usage_00100.pdb 107 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 164 usage_00101.pdb 106 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 163 usage_00117.pdb 110 HEKAVDVLYDG--ETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEF 167 usage_00124.pdb 101 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 158 usage_00125.pdb 102 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 159 usage_00126.pdb 101 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 158 usage_00127.pdb 103 QDKSYDLYYDG--QTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAF 160 D f GCT A t LA G eav k usage_00001.pdb 159 VQNAVAIG 166 usage_00030.pdb 154 ITEA---- 157 usage_00031.pdb 144 ITEA---- 147 usage_00087.pdb 167 VASAIKN- 173 usage_00088.pdb 167 VASAIKN- 173 usage_00089.pdb 162 VASAIKN- 168 usage_00090.pdb 165 VASAIKN- 171 usage_00091.pdb 165 VASAIKN- 171 usage_00092.pdb 162 VASAIKN- 168 usage_00093.pdb 167 VASAIKN- 173 usage_00094.pdb 155 VASAIKN- 161 usage_00095.pdb 162 VASAIKN- 168 usage_00096.pdb 160 VASAIKN- 166 usage_00097.pdb 160 VASAIKN- 166 usage_00098.pdb 164 VASAIKN- 170 usage_00099.pdb 167 VASAIKN- 173 usage_00100.pdb 165 VASAIKN- 171 usage_00101.pdb 164 VASAIKN- 170 usage_00117.pdb 168 ITAAIKE- 174 usage_00124.pdb 159 VASAIKN- 165 usage_00125.pdb 160 VASAIKN- 166 usage_00126.pdb 159 VASAIKN- 165 usage_00127.pdb 161 VASAIKN- 167 A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################