################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:09 2021 # Report_file: c_1214_52.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00122.pdb # 2: usage_00255.pdb # 3: usage_00256.pdb # 4: usage_00257.pdb # 5: usage_00258.pdb # 6: usage_00259.pdb # 7: usage_00260.pdb # 8: usage_00261.pdb # 9: usage_00262.pdb # 10: usage_00263.pdb # 11: usage_00623.pdb # 12: usage_00624.pdb # 13: usage_00625.pdb # # Length: 60 # Identity: 2/ 60 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 60 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 60 ( 68.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 -EWFIAKPI-----------GRLGGPGLVPV---GFVSIIDIATGYATGNDVIEDIKSVN 45 usage_00255.pdb 1 DSFTSKPMK---------QFG-P-GQVPIPGYHKKNEI---------------------- 27 usage_00256.pdb 1 DSFTSKPMKG--------QFG-P-GQVPIPGYHKKNEI---------------------- 28 usage_00257.pdb 1 DSFTSKPMKGDPNAPRSVQFG-P-GQVPIPGYHKKNEI---------------------- 36 usage_00258.pdb 1 DSFTSKPMK---------QFG-P-GQVPIPGYHKKNEI---------------------- 27 usage_00259.pdb 1 DSFTSKPMK---------------GQVPIPGYHKKNEI---------------------- 23 usage_00260.pdb 1 DSFTSKPMK---------------GQVPIPGYHKKNEI---------------------- 23 usage_00261.pdb 1 DSFTSKPMK---------------GQVPIPGYHKKNEI---------------------- 23 usage_00262.pdb 1 DSFTSKPMK---------------GQVPIPGYHKKNEI---------------------- 23 usage_00263.pdb 1 DSFTSKPMK---------------GQVPIPGYHKKNEI---------------------- 23 usage_00623.pdb 1 DSFTSKPMK--------VQFG-P-GQVPIPGYHKKNEI---------------------- 28 usage_00624.pdb 1 DSFTSKPMKGDPNAPRSVQFG-P-GQVPIPGYHKKNEI---------------------- 36 usage_00625.pdb 1 DSFTSKPMK--------VQFG-P-GQVPIPGYHKKNEI---------------------- 28 sftskpmk GqvpiPg knei #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################