################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:01 2021 # Report_file: c_0404_38.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00019.pdb # 2: usage_00056.pdb # 3: usage_00090.pdb # 4: usage_00276.pdb # 5: usage_00277.pdb # 6: usage_00315.pdb # # Length: 99 # Identity: 3/ 99 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 99 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 99 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 KPYPADIVVQFKDVYALM-GQNVTLECFALG-NPVPDIRWRKVLEPMP--STAEIST--S 54 usage_00056.pdb 1 -------LSATDLKIQSTAE-GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV-TG 51 usage_00090.pdb 1 ---------RIQSQTVGQ-GSDAHFRVRVVG-KPDPECEWYKNGVKIERSDRIYWYWPED 49 usage_00276.pdb 1 ---APRITLRMRSHRVPC-GQNTRFILNVQS-KPTAEVKWYHNGVELQESSKIHYTN-TS 54 usage_00277.pdb 1 ---APRITLRMRSHRVPC-GQNTRFILNVQS-KPTAEVKWYHNGVELQESSKIHYTN-TS 54 usage_00315.pdb 1 --------GQIMHAVGEE-GGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITY-ED 50 g W usage_00019.pdb 55 G-AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQA 92 usage_00056.pdb 52 EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS--- 87 usage_00090.pdb 50 NVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 88 usage_00276.pdb 55 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG 93 usage_00277.pdb 55 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG 93 usage_00315.pdb 51 GVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK- 88 L i D g y n g a l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################