################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:31 2021 # Report_file: c_0877_17.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00038.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00190.pdb # 5: usage_00224.pdb # 6: usage_00225.pdb # 7: usage_00226.pdb # 8: usage_00247.pdb # 9: usage_00248.pdb # 10: usage_00249.pdb # 11: usage_00310.pdb # 12: usage_00311.pdb # 13: usage_00315.pdb # # Length: 92 # Identity: 27/ 92 ( 29.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 92 ( 29.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 92 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDV---PKWL 57 usage_00091.pdb 1 APEVFKRDV--TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY---AVPL 55 usage_00092.pdb 1 APEVFKRDV--TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL 58 usage_00190.pdb 1 APELIQGK---GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDV---PKWL 54 usage_00224.pdb 1 APELIQGK---GSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 54 usage_00225.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 57 usage_00226.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 57 usage_00247.pdb 1 APELIQGK---GSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 54 usage_00248.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 57 usage_00249.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 57 usage_00310.pdb 1 APELIQGKS--GSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 55 usage_00311.pdb 1 APELIQGK---GSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 54 usage_00315.pdb 1 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDTAAALVAKIMRGKYDV---PKWL 57 APE D WS G Y L G LPF K L usage_00038.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 usage_00091.pdb 56 TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 87 usage_00092.pdb 59 TPQAVDLLKQMLTKDPERRPSAAQVLHH---- 86 usage_00190.pdb 55 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 86 usage_00224.pdb 55 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 86 usage_00225.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 usage_00226.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 usage_00247.pdb 55 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 86 usage_00248.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 usage_00249.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 usage_00310.pdb 56 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 87 usage_00311.pdb 55 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 86 usage_00315.pdb 58 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 89 P LL QML DP R S L H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################