################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:01 2021 # Report_file: c_0550_11.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # # Length: 198 # Identity: 168/198 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 168/198 ( 84.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/198 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 -YRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPN 59 usage_00038.pdb 1 PYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPN 60 usage_00039.pdb 1 -YRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPN 59 usage_00040.pdb 1 PYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPN 60 YRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPN usage_00037.pdb 60 PSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDE 119 usage_00038.pdb 61 PSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEK-------VQLSDE 113 usage_00039.pdb 60 PSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEK-------Q-LSDE 111 usage_00040.pdb 61 PSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQE--------Q-LSDE 111 PSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQE LSDE usage_00037.pdb 120 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHL 179 usage_00038.pdb 114 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHL 173 usage_00039.pdb 112 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHL 171 usage_00040.pdb 112 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSH- 170 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSH usage_00037.pdb 180 PYMEAFILETFRHSSFVP 197 usage_00038.pdb 174 PYMEAFILETFRHSSFVP 191 usage_00039.pdb 172 PYMEAFILETFRHSSFVP 189 usage_00040.pdb ------------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################