################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:01 2021 # Report_file: c_0990_21.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00029.pdb # 2: usage_00201.pdb # 3: usage_00202.pdb # 4: usage_00203.pdb # 5: usage_00204.pdb # 6: usage_00205.pdb # 7: usage_00206.pdb # 8: usage_00207.pdb # 9: usage_00208.pdb # 10: usage_00219.pdb # 11: usage_00220.pdb # 12: usage_00253.pdb # 13: usage_00254.pdb # 14: usage_00379.pdb # 15: usage_00408.pdb # # Length: 46 # Identity: 11/ 46 ( 23.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 46 ( 32.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 46 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 PFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEP---- 42 usage_00201.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00202.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00203.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00204.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00205.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00206.pdb 1 PFFVKPANT--SVGISRVERFQDLEAALALAFRYDEKAVVEK---- 40 usage_00207.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00208.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00219.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVE----- 41 usage_00220.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEK---- 42 usage_00253.pdb 1 PVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISG 46 usage_00254.pdb 1 PVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEA---- 42 usage_00379.pdb 1 PVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQ---- 42 usage_00408.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSP 46 P fVKPa S G V L A A d k E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################