################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:43 2021 # Report_file: c_0243_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00043.pdb # 7: usage_00052.pdb # 8: usage_00065.pdb # 9: usage_00223.pdb # # Length: 138 # Identity: 17/138 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/138 ( 36.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/138 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00039.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00040.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00041.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00042.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00043.pdb 1 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 51 usage_00052.pdb 1 --KVLVMDENGVSRMVTKGLLVHLGC-EVTTVSSNEECLRVVS---------------HE 42 usage_00065.pdb 1 -VKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGE---------N 50 usage_00223.pdb 1 --RVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQR-EEQGSVDKLP 57 k LVv dN v V k L G e g Ea V usage_00038.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00039.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00040.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00041.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00042.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00043.pdb 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 106 usage_00052.pdb 43 HKVVFMDVCMPG-VENYQIALRIHEKFTQRHQRPLLVALSGN-TDKSTKEKCMSFGLDGV 100 usage_00065.pdb 51 YNMIFMDVQM-PKVDGLLSTKMIRRDLG-Y--TSPIVALTAF-ADDSNIKECLESGMNGF 105 usage_00223.pdb 58 FDYIFMDCQM-PEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAF 116 iFMDvqM p vdg t Ir y pivAl d s ec Gm gf usage_00038.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00039.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00040.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00041.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00042.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00043.pdb 107 LSKPIKRPKLKTILTEFC 124 usage_00052.pdb 101 LLKPVSLDNIRDVLSDLL 118 usage_00065.pdb 106 LSKPIKRPKLKTILTE-- 121 usage_00223.pdb 117 LDKSLN--QLANVIREIE 132 L Kp l l e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################