################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:30 2021 # Report_file: c_1286_52.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00083.pdb # 2: usage_00177.pdb # 3: usage_00462.pdb # 4: usage_00580.pdb # 5: usage_00581.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 30 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 30 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 ---GVAAV--TYGAGAFNMVNAVAGAYAEK 25 usage_00177.pdb 1 ADILNNAVSGGGFDSSLLAYMTS-EEFHK- 28 usage_00462.pdb 1 ---GVVLV--TSGPGASNLATGLLTANTE- 24 usage_00580.pdb 1 ---VIVNI--HTGAGLGNAMGCLLTAYQNK 25 usage_00581.pdb 1 ---VIVNI--HTGAGLGNAMGCLLTAYQNK 25 g g n a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################