################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:46 2021 # Report_file: c_0707_72.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00223.pdb # 2: usage_00304.pdb # 3: usage_00695.pdb # 4: usage_00741.pdb # # Length: 82 # Identity: 11/ 82 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 82 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 82 ( 47.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 ------------------DVWGAGTTVTVSSA---KTTPPSVYPLAPGSAA--A--AASM 35 usage_00304.pdb 1 --YW------------YFDVWGAGTTVTVSSA---KTTPPSVYPLAPGSAA--A--AASM 39 usage_00695.pdb 1 ----TYFCAKGFDYSASTNLWGPGTLVTISSA---STKGPSVFPLAPSS--KST--SGGT 49 usage_00741.pdb 1 TE----------------AFFGQGTRLTVVEDLNKV-FPPEVAVFEPSEAE---ISHTQK 40 wG GT vTvssa pPsV plaP s usage_00223.pdb 36 VTLGCLVKGYFPEPVTVTW--- 54 usage_00304.pdb 40 VTLGCLVKGYFPEPVTVTW--- 58 usage_00695.pdb 50 AALGCLVKDYFP---------- 61 usage_00741.pdb 41 ATLVCLATGFYPDHVELSWWVN 62 tLgCLvkgyfP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################