################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:21 2021 # Report_file: c_0184_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00036.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00048.pdb # 9: usage_00057.pdb # # Length: 163 # Identity: 76/163 ( 46.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/163 ( 53.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/163 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 --MIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKR 58 usage_00038.pdb 1 CKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 60 usage_00039.pdb 1 CKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 60 usage_00040.pdb 1 CKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 60 usage_00041.pdb 1 ---IYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 57 usage_00042.pdb 1 CKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 60 usage_00043.pdb 1 CKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK 60 usage_00048.pdb 1 --MIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKK 58 usage_00057.pdb 1 CKIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA 60 iY ARNaKDv VSYY F M P PgtwEE lEKF G V G W HVK WW usage_00036.pdb 59 KEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTH 118 usage_00038.pdb 61 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 120 usage_00039.pdb 61 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 120 usage_00040.pdb 61 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 120 usage_00041.pdb 58 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 117 usage_00042.pdb 61 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 120 usage_00043.pdb 61 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 120 usage_00048.pdb 59 KEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTH 118 usage_00057.pdb 61 KDMHRILYLFYEDIKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNYTT 120 e IL L YEDmKenPK EI KI FLEK EIL I H SF VMK NP NYT usage_00036.pdb 119 LPTTVMDHSKSPFMRKGTAGDWKNY------------------ 143 usage_00038.pdb 121 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKKME 163 usage_00039.pdb 121 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKKM- 162 usage_00040.pdb 121 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKK-- 161 usage_00041.pdb 118 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKK-- 158 usage_00042.pdb 121 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKKM- 162 usage_00043.pdb 121 MMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKKME 163 usage_00048.pdb 119 LPTTVMDHSKSPFMRKGTAGDWKNY------------------ 143 usage_00057.pdb 121 LPTSIMDHSISPFMRKGMPGDWKNYFTVAQNEEFDKDYQKKM- 162 MDHS SPFMRKG GDWKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################