################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:32 2021 # Report_file: c_1408_15.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00318.pdb # 2: usage_00987.pdb # 3: usage_01024.pdb # 4: usage_01272.pdb # 5: usage_01291.pdb # 6: usage_01292.pdb # 7: usage_01430.pdb # 8: usage_01499.pdb # 9: usage_01500.pdb # 10: usage_01630.pdb # # Length: 123 # Identity: 67/123 ( 54.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/123 ( 54.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/123 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00318.pdb 1 ----YKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSL 56 usage_00987.pdb 1 --GNYKRTVKRIDDGHRLCSDL-NCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTV 57 usage_01024.pdb 1 ------RTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTV 54 usage_01272.pdb 1 EVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTV 60 usage_01291.pdb 1 EVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSL 60 usage_01292.pdb 1 --GNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSL 58 usage_01430.pdb 1 -VGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSL 59 usage_01499.pdb 1 ----YKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSL 56 usage_01500.pdb 1 EVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSL 60 usage_01630.pdb 1 EVGNYKRTVKRIDDGHRLCNDL-NCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSL 59 RTVKRIDDGHRLC DL C ERA IEKAY QQLT WA RWRQL EKGPQYG usage_00318.pdb 57 ERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 116 usage_00987.pdb 58 EKAW-AF-SEAERVSELHLEVKASL-NDDFEKIKNWQKEAFHKQ--GGFKETKEAEDGFR 112 usage_01024.pdb 55 EKAWIAVMSEAERVSELHLEVKASLMNEDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFR 114 usage_01272.pdb 61 EKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEA-------------------- 100 usage_01291.pdb 61 ERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 120 usage_01292.pdb 59 ERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 118 usage_01430.pdb 60 ERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 119 usage_01499.pdb 57 ERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 116 usage_01500.pdb 61 ERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFR 120 usage_01630.pdb 60 ERAWGAI-TEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQI-GGFKETKEAEDGFR 117 E AW A EA VSELH EVK L N D EK KNWQK A usage_00318.pdb 117 KAQ 119 usage_00987.pdb 113 KAQ 115 usage_01024.pdb 115 KAQ 117 usage_01272.pdb --- usage_01291.pdb 121 KAQ 123 usage_01292.pdb 119 KAQ 121 usage_01430.pdb 120 KAQ 122 usage_01499.pdb 117 KAQ 119 usage_01500.pdb 121 KAQ 123 usage_01630.pdb 118 KAQ 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################