################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:55 2021 # Report_file: c_1009_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00015.pdb # 2: usage_00018.pdb # 3: usage_00033.pdb # 4: usage_00036.pdb # 5: usage_00041.pdb # 6: usage_00074.pdb # 7: usage_00085.pdb # 8: usage_00155.pdb # 9: usage_00177.pdb # 10: usage_00262.pdb # 11: usage_00263.pdb # 12: usage_00264.pdb # 13: usage_00357.pdb # # Length: 49 # Identity: 30/ 49 ( 61.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 49 ( 65.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 49 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 48 usage_00018.pdb 1 VAIKTLK-----PPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 44 usage_00033.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCE 48 usage_00036.pdb 1 VAIKTLKM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 45 usage_00041.pdb 1 VAIKTL------------QEAQVMKKLRHEKLVQLYAVVSEEPIYIVME 37 usage_00074.pdb 1 VAIKTLK-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 44 usage_00085.pdb 1 VAIKTLK-PG-------LQEAQVMKKLRHEKLVQLYAVVSEEIYIV-GE 40 usage_00155.pdb 1 VAIKTL----------FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVME 39 usage_00177.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIIVTE- 47 usage_00262.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIE 48 usage_00263.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIE 48 usage_00264.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 48 usage_00357.pdb 1 VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 48 VAIKTL QEAQVMKKLRHEKLVQLYAVVSEEpi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################