################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:37 2021 # Report_file: c_0030_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00023.pdb # 4: usage_00024.pdb # # Length: 192 # Identity: 165/192 ( 85.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 171/192 ( 89.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/192 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -SVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNAGHTIVFGGVKYKLHLIPSGIFY 59 usage_00013.pdb 1 SSVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNAGHTIVFGGVKYKLHLIPSGIFY 60 usage_00023.pdb 1 SSVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNGHTIV----FKYKLHLIPSGIFY 56 usage_00024.pdb 1 SSVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNAGHTI----VKYKLHLIPSGIFY 56 SVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNaghti vKYKLHLIPSGIFY usage_00012.pdb 60 KEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASKG 119 usage_00013.pdb 61 KEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASKG 120 usage_00023.pdb 57 KEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASK- 115 usage_00024.pdb 57 KEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASK- 115 KEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASK usage_00012.pdb 120 DNKIGTTKKGIGPAYDKAARIGIRADLLDREAFKEKLEQNLAQKNRLFEKYDTEGFSVDE 179 usage_00013.pdb 121 DNKIGTTKKGIGPAYDKAARIGIRADLLDREAFKEKLEQNLAQKNRLFEKYDTEGFSVDE 180 usage_00023.pdb 116 ---GD-TKKGIGPAYDKAARIGIRADLLDREAFKEKLEQNLAQKNRLFEKYDTEGFSVDE 171 usage_00024.pdb 116 -------KKGIGPAYDKAARIGIRADLLDREAFKEKLEQNLAQKNRLFEKYDTEGFSVDE 168 KKGIGPAYDKAARIGIRADLLDREAFKEKLEQNLAQKNRLFEKYDTEGFSVDE usage_00012.pdb 180 IFEEYFEYGQQI 191 usage_00013.pdb 181 IFEE-------- 184 usage_00023.pdb 172 IFEEYFEYGQQI 183 usage_00024.pdb 169 IFEEYFEYGQQI 180 IFEE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################