################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:40 2021 # Report_file: c_0309_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00032.pdb # 2: usage_00050.pdb # 3: usage_00051.pdb # 4: usage_00052.pdb # 5: usage_00053.pdb # 6: usage_00060.pdb # 7: usage_00061.pdb # 8: usage_00062.pdb # 9: usage_00066.pdb # 10: usage_00111.pdb # 11: usage_00114.pdb # 12: usage_00135.pdb # 13: usage_00136.pdb # 14: usage_00151.pdb # # Length: 159 # Identity: 33/159 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/159 ( 35.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/159 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 --KTVDNFVALATGEK----------GFGYKNSKFHRVIKDFMIQGGDFTRG-----DGT 43 usage_00050.pdb 1 -----ENFRQFCTGEFRKDG-----VPIGYKGSTFHRVIKDFMIQGGDFVNG-----DGT 45 usage_00051.pdb 1 -PKTVENFVALATGEK----------GYGYKGSKFHRVIKDFMIQGGDITTG-----DGT 44 usage_00052.pdb 1 -PKTVENFVALATGEK----------GYGYKGSKFHRVIKDFMIQGGDITTG-----DGT 44 usage_00053.pdb 1 -PKTVENFVALATGEK----------GYGYKGSKFHRVIKDFMIQGGDITTG-----DGT 44 usage_00060.pdb 1 VPKTVDNFVALATGEK----------GFGYKNSKFHRVIKDFMIQGGDFTRG-----DGT 45 usage_00061.pdb 1 -PKTVDNFVALATGEK----------GFGYKNSKFHRVIKDFMIQGGDFTRG-----DGT 44 usage_00062.pdb 1 -PKTVDNFVALATGEK----------GFGYKNSKFHRVIKDFMIQGGDFTRG-----DGT 44 usage_00066.pdb 1 -PKTCENFRCLCTGEKGT--GKSTQKPLHYK-SLFHRVVKDFMVQGGDFSEG-----NGR 51 usage_00111.pdb 1 --RACDSFLRLCAV-K------------YFDDTIFHRCIRNFMIQGGRAELRQPQQS-PR 44 usage_00114.pdb 1 -PLTTENFRQLCTGEH----------GFGYKDSIFHRVIPNFMIQGGDFTNF-----DGT 44 usage_00135.pdb 1 -PKTVDNFVALATGEK----------GFGYKDSKFHRVIKDFMIQGGDFTRG-----DGT 44 usage_00136.pdb 1 -PKTVDNFVALATGEK----------GFGYKDSKFHRVIKDFMIQGGDFTRG-----DGT 44 usage_00151.pdb 1 -PKTCENFRCLCTGEKGT--GKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG-----NGR 52 nF l tg yk FHRv FM QGGd g usage_00032.pdb 44 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 100 usage_00050.pdb 46 GVASIY--RGPFADEN-FKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFG 102 usage_00051.pdb 45 GGVSIY--GETFPDEN-FKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFG 101 usage_00052.pdb 45 GGVSIY--GETFPDEN-FKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFG 101 usage_00053.pdb 45 GGVSIY--GETFPDEN-FKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFG 101 usage_00060.pdb 46 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 102 usage_00061.pdb 45 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 101 usage_00062.pdb 45 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 101 usage_00066.pdb 52 GGESIY--GGFFEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFG 108 usage_00111.pdb 45 -SISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFG 103 usage_00114.pdb 45 GGKSIY--GEKFADEN-LKVKHF-VGAASMANAGPNTNGSQFFITTAPTPWLDGRHVVFG 100 usage_00135.pdb 45 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 101 usage_00136.pdb 45 GGKSIY--GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 101 usage_00151.pdb 53 GGESIY--GGFFEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFG 109 Siy g F DE H SMAN G tNgsqFFIT Ldg HvvFG usage_00032.pdb 101 KVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVE- 138 usage_00050.pdb 103 KIIDGLLVMRKIENVPTGPNNKPKLPVVISQCG------ 135 usage_00051.pdb 102 KVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKIDVK- 139 usage_00052.pdb 102 KVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKIDVK- 139 usage_00053.pdb 102 KVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKIDVK- 139 usage_00060.pdb 103 KVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVE- 140 usage_00061.pdb 102 KVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVE- 139 usage_00062.pdb 102 KVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVE- 139 usage_00066.pdb 109 QVISGQEVVREIENQKTDAASKPFAEVRILSCG------ 141 usage_00111.pdb 104 RVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFKNPF 142 usage_00114.pdb 101 KVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASG------ 133 usage_00135.pdb 102 KVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIEVE- 139 usage_00136.pdb 102 KVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIEVE- 139 usage_00151.pdb 110 QVISGQEVVREIENQKTDAASKPFAEVRILSCG------ 142 v G V E T P i g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################