################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:25 2021 # Report_file: c_1429_38.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00020.pdb # 2: usage_00506.pdb # 3: usage_00565.pdb # 4: usage_00663.pdb # 5: usage_00765.pdb # 6: usage_00768.pdb # 7: usage_00769.pdb # 8: usage_00847.pdb # 9: usage_01217.pdb # 10: usage_01218.pdb # 11: usage_01306.pdb # 12: usage_01307.pdb # 13: usage_01308.pdb # 14: usage_01495.pdb # 15: usage_01634.pdb # 16: usage_01690.pdb # # Length: 75 # Identity: 2/ 75 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 75 ( 30.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 75 ( 68.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_00506.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_00565.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_00663.pdb 1 -----------------PHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 36 usage_00765.pdb 1 ------------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 41 usage_00768.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_00769.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_00847.pdb 1 G-----------TSMATPHVAGVAALVKQKNPSW-------SNVQIRNHLKNTATGLGNT 42 usage_01217.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_01218.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_01306.pdb 1 ------------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 41 usage_01307.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_01308.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_01495.pdb 1 ------------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 41 usage_01634.pdb 1 G-----------TSMATPHVAGAAALVKQKNPSW-------SNVQIRNHLKNTATSLGST 42 usage_01690.pdb 1 -TSEGESELAKIPFFVRGKVRRNTEKYARQAG--CREIDGETLLDAKAHF---------- 47 phVag aalvkqknp snvqirnHl usage_00020.pdb 43 NLYGSGLVNAEAATR 57 usage_00506.pdb 43 NLYGSGLVNAEAATR 57 usage_00565.pdb 43 NLYGSGLVNAEAATR 57 usage_00663.pdb 37 NLYGSGLVNAEAATR 51 usage_00765.pdb 42 NLYGSGLVNAEAATR 56 usage_00768.pdb 43 NLYGSGLVNAEAATR 57 usage_00769.pdb 43 NLYGSGLVNAEAATR 57 usage_00847.pdb 43 NLYGSGLVNAEAATR 57 usage_01217.pdb 43 NLYGSGLVNAEAATR 57 usage_01218.pdb 43 NLYGSGLVNAEAATR 57 usage_01306.pdb 42 NLYGSGLVNAEAATR 56 usage_01307.pdb 43 NLYGSGLVNAEAATR 57 usage_01308.pdb 43 NLYGSGLVNAEAATR 57 usage_01495.pdb 42 NLYGSGLVNAEAATR 56 usage_01634.pdb 43 NLYGSGLVNAEAATR 57 usage_01690.pdb --------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################