################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:04 2021 # Report_file: c_0302_24.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00050.pdb # 2: usage_00051.pdb # 3: usage_00052.pdb # 4: usage_00053.pdb # 5: usage_00059.pdb # 6: usage_00060.pdb # # Length: 133 # Identity: 43/133 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/133 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/133 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 QYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAADTRNPWRSPERMAMIEACL 60 usage_00051.pdb 1 QYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAADTRNPWRSPERMAMIEACL 60 usage_00052.pdb 1 --SVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDL 58 usage_00053.pdb 1 DISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDL 60 usage_00059.pdb 1 --SVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDL 58 usage_00060.pdb 1 --SVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDL 58 IGRFQPFH GHL AL VII GS NP R MIE L usage_00050.pdb 61 S---PQILKRVHFLTVRDWLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASSYY-LN 116 usage_00051.pdb 61 S---PQILKRVHFLTVRDWLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASSYY-LN 116 usage_00052.pdb 59 QVAGI-DLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHI-KDSSSYYIR 116 usage_00053.pdb 61 QVAGI-DLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVG-----SSSYYIR 114 usage_00059.pdb 59 QVAGI-DLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHI-KDSSSYYIR 116 usage_00060.pdb 59 QVAGI-DLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHI-KDSSSYYIR 116 L V D Y W V K NS G SS Y usage_00050.pdb 117 LFPQWDYLET-G- 127 usage_00051.pdb 117 LFPQWDYLET-G- 127 usage_00052.pdb 117 SFPEWDYIGVDNY 129 usage_00053.pdb 115 SFPEWDYIGV-D- 125 usage_00059.pdb 117 SFPEWDYIGV--- 126 usage_00060.pdb 117 SFPEWDYIGV-D- 127 FP WDY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################