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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:00 2021
# Report_file: c_1115_27.html
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#====================================
# Aligned_structures: 8
#   1: usage_00315.pdb
#   2: usage_00320.pdb
#   3: usage_00472.pdb
#   4: usage_00485.pdb
#   5: usage_00489.pdb
#   6: usage_00551.pdb
#   7: usage_01261.pdb
#   8: usage_01411.pdb
#
# Length:         80
# Identity:        6/ 80 (  7.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     35/ 80 ( 43.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/ 80 ( 33.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00315.pdb         1  ------------AATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   45
usage_00320.pdb         1  LPLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   57
usage_00472.pdb         1  -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   56
usage_00485.pdb         1  -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   56
usage_00489.pdb         1  -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   56
usage_00551.pdb         1  LPLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER   57
usage_01261.pdb         1  ----DYAREELYRNVYQVLRGENPDDPTYLTVSTFLK-----YGSSLENTAKELNVHPNT   51
usage_01411.pdb         1  SPVDAATQSLLSEELEKALSKLS--EREAMVLKLRKGLIDGR-EHTLEEVGAFFGVTRER   57
                                            vL gl    rea vl  r g        tLEevgk f Vtrer

usage_00315.pdb        46  IRQIEAKALRKLR-------   58
usage_00320.pdb        58  IRQIEAKALRKLR-------   70
usage_00472.pdb        57  IRQIEAKALRKLR-------   69
usage_00485.pdb        57  IRQIEAKALRKLR-------   69
usage_00489.pdb        57  IRQIEAKALRKLR-------   69
usage_00551.pdb        58  IRQIEAKALRKLR-------   70
usage_01261.pdb        52  VRYRLKRAAETTG-------   64
usage_01411.pdb        58  IRQIENKALRKLKYHESRTR   77
                           iRqie kAlrkl        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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