################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:06 2021 # Report_file: c_1338_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00011.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00019.pdb # 8: usage_00021.pdb # 9: usage_00022.pdb # 10: usage_00023.pdb # 11: usage_00064.pdb # 12: usage_00065.pdb # 13: usage_00393.pdb # # Length: 30 # Identity: 8/ 30 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 30 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 30 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILL- 25 usage_00013.pdb 1 -----GQIAKEMG-LRAYIVGGVVRDILLG 24 usage_00014.pdb 1 ----VGQIAKEMG-LRAYIVGGVVRDILL- 24 usage_00016.pdb 1 -----GQIAKEMG-LRAYIVGGVVRDILLG 24 usage_00017.pdb 1 ----VGQIAKEMG-LRAYIVGGVVRDILLG 25 usage_00018.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00019.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00021.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00022.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00023.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00064.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00065.pdb 1 ---MVGQIAKEMG-LRAYIVGGVVRDILLG 26 usage_00393.pdb 1 YFDDVAKVL--PREHYCFIVGGWVRDRILG 28 gqia mg lrayIVGGvVRDilL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################