################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:36 2021 # Report_file: c_1243_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00182.pdb # 2: usage_00362.pdb # 3: usage_00479.pdb # 4: usage_00480.pdb # 5: usage_00481.pdb # 6: usage_00482.pdb # # Length: 78 # Identity: 0/ 78 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 78 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/ 78 ( 85.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 -----------------------------ITSNYGLATEFNDTYAGGSVGGTTDLETMNL 31 usage_00362.pdb 1 AEAEETIETSLA--TPREA----------------GLLGTDVGLPM-------------- 28 usage_00479.pdb 1 -------VNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEI-------------- 39 usage_00480.pdb 1 -------VNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEI-------------- 39 usage_00481.pdb 1 -------VNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEI-------------- 39 usage_00482.pdb 1 -------VNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEI-------------- 39 l g n usage_00182.pdb 32 NLSGAYRLN--------- 40 usage_00362.pdb 29 ---------LMLSRHSQD 37 usage_00479.pdb 40 ---------K-------- 40 usage_00480.pdb 40 ---------K-------- 40 usage_00481.pdb 40 ---------K-------- 40 usage_00482.pdb 40 ---------K-------- 40 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################