################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:12 2021 # Report_file: c_0147_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00062.pdb # 2: usage_00081.pdb # 3: usage_00082.pdb # 4: usage_00112.pdb # 5: usage_00466.pdb # 6: usage_00467.pdb # 7: usage_00468.pdb # 8: usage_00587.pdb # 9: usage_00730.pdb # # Length: 129 # Identity: 75/129 ( 58.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/129 ( 69.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/129 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 VQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYA 60 usage_00081.pdb 1 --LVESGSAMRKPGSSVKISCRASGFNFREYSIHWVRLIPGRGLEWMGWIKGMWGAVNYA 58 usage_00082.pdb 1 --LVESGSAMRKPGSSVKISCRASGFNFREYSIHWVRLIPGRGLEWMGWIKGMWGAVNYA 58 usage_00112.pdb 1 VQLVESGPVMRKPGSSMKISCATSGYNFRDFSIHWVRFNRRYGFEWIGWIKPMWGAVNYA 60 usage_00466.pdb 1 VQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYA 60 usage_00467.pdb 1 VQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYA 60 usage_00468.pdb 1 VQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYA 60 usage_00587.pdb 1 VQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYA 60 usage_00730.pdb 1 VRLIQSGAVMRKPGSSVKISCRASGYNFREYSIHWVRLIPGRGLEWIGWIKGMWGAVSYA 60 Lv SG PGSSvKISCraSG NFR ySIHWVRlip G EW GWIK WGAV YA usage_00062.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCD-YCGDFPWQYW 119 usage_00081.pdb 59 RQLQGRVSMTRQLSQ-D-P-DWGVAYLDFSGLTSGDTGEYFCVRKGPSCPHCGDFHWQHW 115 usage_00082.pdb 59 RQLQGRVSMTRQLS----P-DWGVAYLDFSGLTSGDTGEYFCVRKGPSCPHCGDFHWQHW 113 usage_00112.pdb 61 RQLQGRVSMSRLFSQDLYYPDRGTAYLEFSGLTSADTADYFCVRRGSSCPHCGDFHFEHW 120 usage_00466.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCD-YCGDFPWQYW 119 usage_00467.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCD-YCGDFPWQYW 119 usage_00468.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCD-YCGDFPWQYW 119 usage_00587.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCD-YCGDFPWQYW 119 usage_00730.pdb 61 RQLQGRVSMTRQLSQDPDDPDWGIAYLEFSGLTSGDTAEYFCVRKGPSCPHCGDFHWQHW 120 RQLQGRVSMtRqlS DwG AY FSGLT DT eYFCVR G CGDF wq W usage_00062.pdb 120 CQGTVVVVS 128 usage_00081.pdb 116 GQGTLVVVS 124 usage_00082.pdb 114 GQGTLVVVS 122 usage_00112.pdb 121 GQGTAVVVS 129 usage_00466.pdb 120 CQGTVVVVS 128 usage_00467.pdb 120 CQGTVVVVS 128 usage_00468.pdb 120 CQGTVVVVS 128 usage_00587.pdb 120 GQGTVVVVS 128 usage_00730.pdb 121 GQGTAVVVS 129 QGT VVVS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################