################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:36 2021 # Report_file: c_1486_27.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00721.pdb # 2: usage_00874.pdb # 3: usage_00914.pdb # 4: usage_00915.pdb # 5: usage_00916.pdb # 6: usage_00919.pdb # 7: usage_00920.pdb # 8: usage_00921.pdb # 9: usage_01032.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 35 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 35 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00721.pdb 1 SHEDIERLVRITLGKPE-DEEEKLLSE-------- 26 usage_00874.pdb 1 PKSAAVGEVKAAVD---RLRLAELDLKK------- 25 usage_00914.pdb 1 -YQEIHRQVAKVRN---LPRLEERIAALE------ 25 usage_00915.pdb 1 PYQEIHRQVAKVRN---LPRLEERIAALE------ 26 usage_00916.pdb 1 PYQEIHRQVAKVRN---LPRLEERIAALEKLVQKL 32 usage_00919.pdb 1 PYQEIHRQVAKVRN---LPRLEERIAALEK----- 27 usage_00920.pdb 1 PYQEIHRQVAKVRN---LPRLEERIAALEKLVQK- 31 usage_00921.pdb 1 PYQEIHRQVAKVRN---LPRLEERIAALE------ 26 usage_01032.pdb 1 -RAHHHMLVKITRL---FPVWALLLSVAAYFRP-- 29 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################