################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:12 2021 # Report_file: c_1138_54.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00071.pdb # 2: usage_00072.pdb # 3: usage_00074.pdb # 4: usage_00383.pdb # 5: usage_00792.pdb # # Length: 146 # Identity: 5/146 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/146 ( 17.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/146 ( 32.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 LYFVVNVIIPCLLFSFLTGLVFYLPTDSGE-KMTLSISVLLSLTVFLLVIVELIPSTS-- 57 usage_00072.pdb 1 LFYIVYTIIPCILISILAILVFYLPPDAGE-KMSLSISALLAVTVFLLLLADKVPETS-- 57 usage_00074.pdb 1 LYFVVNVIIPCLLFSFLTGLVFYLPTDSGE-KMTLSISVLLSLTVFLLVIVELIPSTS-- 57 usage_00383.pdb 1 --YTINLIIPCVLITSLAILVFYLP-----SDCGEKMTLCISVLLALTVFLLLISKIVPP 53 usage_00792.pdb 1 -----PCVLISALALLVFLLP---------ADSGEKISLGITVLLSLTVFMLLVAEIM-- 44 iipc L l Lv is L v l usage_00071.pdb 58 S--AVPL------IGKYMLFTMIFVISSIIITVVVINTHHRS---------AMVIDHILL 100 usage_00072.pdb 58 L--SVPI------IIRYLMFIMILVAFSVILSVVVLNLHHRS---------AMVADRLFL 100 usage_00074.pdb 58 S--AVPL------IGKYMLFTMIFVISSIIITVVVINTHHRS---------AMVIDHILL 100 usage_00383.pdb 54 T--SSDS----PSVGEYLMFTMVLVTFSIVTSVCVLNVHHRSPETHTGGG-GGIDRLFLW 106 usage_00792.pdb 45 PSTSDSSPSIAQYFASTMIIVGLSVVVTVIVLQYHH--HDPDGGEG---GGEGIDRLCLM 99 y f m V s i v v Hhrs l usage_00071.pdb 101 CVFMLICIIGTVSVFAGRLIELSQEG 126 usage_00072.pdb 101 YVFFVICSIGTFSIFLDASHNVPPDN 126 usage_00074.pdb 101 CVFMLICIIGTVSVFAGRLIELSQEG 126 usage_00383.pdb 107 IFVFVCVFGTIGMFL----------- 121 usage_00792.pdb 100 AFSVFTIICTIGILMSA--------- 116 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################