################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:11 2021 # Report_file: c_0233_7.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00015.pdb # 2: usage_00017.pdb # 3: usage_00024.pdb # 4: usage_00032.pdb # 5: usage_00042.pdb # 6: usage_00096.pdb # 7: usage_00102.pdb # 8: usage_00103.pdb # 9: usage_00104.pdb # 10: usage_00120.pdb # 11: usage_00134.pdb # 12: usage_00135.pdb # 13: usage_00136.pdb # 14: usage_00137.pdb # # Length: 173 # Identity: 83/173 ( 48.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 124/173 ( 71.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/173 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00017.pdb 1 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 60 usage_00024.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNL---STIGVEFATRSIQVDGKTIKAQIWDTA 57 usage_00032.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00042.pdb 1 -YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 59 usage_00096.pdb 1 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNM---G-V--EFATRTLEIEGKRIKAQIWDTA 54 usage_00102.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00103.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00104.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00120.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00134.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00135.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 usage_00136.pdb 1 -YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 59 usage_00137.pdb 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60 lFKvVLIGdSGVGKsNLLSRFTrNEFn i EFaTR gk iKAQIWDTA usage_00015.pdb 61 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI-LVGNKSDL 119 usage_00017.pdb 61 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 120 usage_00024.pdb 58 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 117 usage_00032.pdb 61 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI-LVGNKSDL 119 usage_00042.pdb 60 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 119 usage_00096.pdb 55 GQERYRAITSAYYRGAVGALIVYD-SKSSSYENCNHWLSELRENAD--VAVGLIGNKSDL 111 usage_00102.pdb 61 GLER--AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 118 usage_00103.pdb 61 GLR---AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 117 usage_00104.pdb 61 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120 usage_00120.pdb 61 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI-LVGNKSDL 119 usage_00134.pdb 61 GLER--AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 118 usage_00135.pdb 61 GLER--AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 118 usage_00136.pdb 60 GLE----ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 115 usage_00137.pdb 61 GLE---AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 117 G e ITSAYYRGAVGALlVyD Kh tYenverWLkELrdhAd iv LvGNKSDL usage_00015.pdb 120 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-------- 164 usage_00017.pdb 121 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKV----- 168 usage_00024.pdb 118 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-- 168 usage_00032.pdb 120 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-------- 164 usage_00042.pdb 120 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI------ 166 usage_00096.pdb 112 AHLRAVPTEESKTFAQENQLLFTETSALS-ENVDKAFEELINTIYQKV----- 158 usage_00102.pdb 119 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK-- 169 usage_00103.pdb 118 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK-- 168 usage_00104.pdb 121 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ--- 170 usage_00120.pdb 120 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-------- 164 usage_00134.pdb 119 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK-- 169 usage_00135.pdb 119 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 171 usage_00136.pdb 116 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK-- 166 usage_00137.pdb 118 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ--- 167 hlRaVPT Ear FAe N L F ETSALd tNVe AF l eIy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################