################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:47 2021 # Report_file: c_1321_11.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00052.pdb # 2: usage_00073.pdb # 3: usage_00108.pdb # 4: usage_00181.pdb # 5: usage_00265.pdb # 6: usage_00303.pdb # 7: usage_00304.pdb # 8: usage_00434.pdb # 9: usage_00533.pdb # 10: usage_00571.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 48 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 48 ( 70.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -----EQEQKLAL-ETTV-LVESYT-LP--D-------GRI--IKVGG 29 usage_00073.pdb 1 --SLAEVKSALDA-SN--QEAGGSSIEL-A-------EAEY--MVRA- 32 usage_00108.pdb 1 D---FENEMATAA-SSSS-LEKSYE-LP--D-------GQV--ITIG- 30 usage_00181.pdb 1 --------SPEAY-ER---SVVCSG-F---AKTYAMTGWRV--GFLA- 29 usage_00265.pdb 1 ---SNAD-LIYGA-KK--MPVIKK--A---N-------T-TIG----- 23 usage_00303.pdb 1 ----FENEMATAA-SSSS-LEKSYE-LP--D-------GQV--ITIG- 29 usage_00304.pdb 1 D---FENEMATAA-SSSS-LEKSYE-LP--D-------GQV--ITIG- 30 usage_00434.pdb 1 ---------SENQYFQ--SAIWSGF-IKVS--------DEY--TFATS 26 usage_00533.pdb 1 ----FENEMATAA-SSSS-LEKSYE-LP--D-------GQV--ITIGN 30 usage_00571.pdb 1 -KADIAWAASAEV-AN--KPRLVF--V---G-------D-E--LRYA- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################