################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:33 2021 # Report_file: c_1373_156.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00100.pdb # 2: usage_00205.pdb # 3: usage_00206.pdb # 4: usage_00207.pdb # 5: usage_00208.pdb # 6: usage_00229.pdb # 7: usage_00414.pdb # 8: usage_00415.pdb # 9: usage_01173.pdb # 10: usage_01174.pdb # 11: usage_01501.pdb # 12: usage_01801.pdb # # Length: 71 # Identity: 1/ 71 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 71 ( 2.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 71 ( 83.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 --A------------------------VSAKKKAILSAALDTFSQFGFHGT--RLEQIAE 32 usage_00205.pdb 1 ------------------------------KKKAILSAALDTFSQFGFHGT--RLEQIAE 28 usage_00206.pdb 1 -----------------------------AKKKAILSAALDTFSQFGFHGT--RLEQIAE 29 usage_00207.pdb 1 ------------------------------KKKAILSAALDTFSQFGFHGT--RLEQIAE 28 usage_00208.pdb 1 -----------------------------AKKKAILSAALDTFSQFGFHGT--RLEQIAE 29 usage_00229.pdb 1 ------------------------------TRQRIVAAAKEEFARHGIAGA--RVDRIAK 28 usage_00414.pdb 1 -RA------------------------VSAKKKAILSAALDTFSQFGFHGT--RLEQIAE 33 usage_00415.pdb 1 -----------------------------AKKKAILSAALDTFSQFGFHGT--RLEQIAE 29 usage_01173.pdb 1 -RA------------------------VSAKKKAILSAALDTFSQFGFHGT--RLEQIAE 33 usage_01174.pdb 1 SRA------------------------VSAKKKAILSAALDTFSQFGFHGT--RLEQIAE 34 usage_01501.pdb 1 -HC------------------------SNLAADALRRAIVDYFRKNGK---IDKIKELG- 31 usage_01801.pdb 1 ---NIKQRLIKKVQEAVLDKWVNDPHRDRRLLALIYLAHASD------------------ 39 i A usage_00100.pdb 33 LAGVSKTNLLY 43 usage_00205.pdb 29 LAGVSKTNLLY 39 usage_00206.pdb 30 LAGVSKTNLLY 40 usage_00207.pdb 29 LAGVSKTNLLY 39 usage_00208.pdb 30 LAGVSKTNLLY 40 usage_00229.pdb 29 QARTSKERVYA 39 usage_00414.pdb 34 LAGVSKTNLLY 44 usage_00415.pdb 30 LAGVSKTNLLY 40 usage_01173.pdb 34 LAGVSKTNLLY 44 usage_01174.pdb 35 LAGVSKTNLLY 45 usage_01501.pdb 32 ----LEKELEK 38 usage_01801.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################