################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:13 2021 # Report_file: c_0590_17.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00148.pdb # 2: usage_00162.pdb # 3: usage_00163.pdb # 4: usage_00164.pdb # 5: usage_00204.pdb # # Length: 116 # Identity: 18/116 ( 15.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/116 ( 51.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/116 ( 42.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00148.pdb 1 DMVFVTSGMGGGTGTGAAPVVAKIAKEM-G-ALTVGVVTRPFS-----------AAAGVE 47 usage_00162.pdb 1 DMVFVTSGMGGGTGTGAAPVVAKIAKEM-G-ALTVGVVTRP--FSFEGRKRQTQAAAGVE 56 usage_00163.pdb 1 DMVFVTSGMGGGTGTGAAPVVAKIAKEM-G-ALTVGVVTRP--FSFEGRKRQTQAAAGVE 56 usage_00164.pdb 1 DMVFVTSGMGGGTGTGAAPVVAKIAKEM-G-ALTVGVVTRP--FSFEGRKRQTQAAAGVE 56 usage_00204.pdb 1 DLIFVMTSVSGGTGSSFSPLMIHELKKRYKNATIVPIAVLP--FREEGTIYLQNAAFCLR 58 DmvFVtsgmgGGTGtgaaPvvakiaKem g AltVgvvtrP AAagve usage_00148.pdb 48 AMKAA-VDTLIVIPN----------------------D----RLLDIVDK------ 70 usage_00162.pdb 57 AMKAA-VDTLIVIP-NDRLLDIVDKST----PMMEAFKEADNVLRQGVQGISDLIA 106 usage_00163.pdb 57 AMKAA-VDTLIVIP-NDRLLDIVDKST----PMMEAFKEADNVLRQGVQGISDLIA 106 usage_00164.pdb 57 AMKAA-VDTLIVIP-NDRLLDIVDKST----PMMEAFKEADNVLRQGVQGISDLIA 106 usage_00204.pdb 59 EMIEVEADGMILVD-NQYLK-------RIASAYDRINTMVAQRLLFLIEALD-S-- 103 aMkaa vDtlIvip L v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################