################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:57 2021 # Report_file: c_0126_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00013.pdb # 2: usage_00015.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00058.pdb # 6: usage_00091.pdb # 7: usage_00092.pdb # 8: usage_00117.pdb # 9: usage_00121.pdb # # Length: 169 # Identity: 68/169 ( 40.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/169 ( 49.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/169 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 NANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEE---KCTEYWPE 57 usage_00015.pdb 1 NANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPE 60 usage_00028.pdb 1 NANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQL-------VHYWPT 53 usage_00029.pdb 1 NANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKEKCVHYWPT 60 usage_00058.pdb 1 NANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE----CVHYWPT 56 usage_00091.pdb 1 NANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE----CVHYWPT 56 usage_00092.pdb 1 NANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPE 60 usage_00117.pdb 1 NANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMIT---------TEYWPE 51 usage_00121.pdb 1 NANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQL------CVHYWPT 54 NANYIRGY G EKvyIATQGP TV DFW MVWQE IVM T YWP usage_00013.pdb 58 EQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQK---TPDRAPPL 114 usage_00015.pdb 61 EQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQK---TPDRAPPL 117 usage_00028.pdb 54 EEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPAHQTPE---SAGPL 110 usage_00029.pdb 61 EEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE---SAGPL 117 usage_00058.pdb 57 EEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRDVKHILFSAWPDHQTPE---SAGPL 113 usage_00091.pdb 57 EEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE---SAGPL 113 usage_00092.pdb 61 KRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPD---SAQPL 117 usage_00117.pdb 52 EQVAYDGVEITVQKVIHTEDYRLRLISLKS--EERGLKHYWFTSWPDQK---TPDRAPPL 106 usage_00121.pdb 55 EEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE---SAGPL 111 e Y i q Y R e r KH f WPd A PL usage_00013.pdb 115 LHLVREVEEAAQQEGPHCAPIIVHCSAGIGRTGCFIATSICCQQLRQ-- 161 usage_00015.pdb 118 LHLVREVEEAAQQEGPHCAPI-IVHSAGIGRTGCFIATSICCQQLRQ-- 163 usage_00028.pdb 111 LRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARG 158 usage_00029.pdb 118 LRLVAEVEESP-ETAAHPGPIVVHSSAGIGRTGCFIATRIGCQQLK--- 162 usage_00058.pdb 114 LRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARG 161 usage_00091.pdb 114 LRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARG 161 usage_00092.pdb 118 LQLMLDVEEDR-LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKE-- 163 usage_00117.pdb 107 LHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLRQ-- 153 usage_00121.pdb 112 LRLVAEVEESP-ETAAHPGPIVVHSSAGIGRTGCFIATRIGCQQLKARG 159 L Lv eVEE h Pi vh SAGIGRTGCFIAT I CQQL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################