################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:23 2021 # Report_file: c_0209_13.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00023.pdb # 2: usage_00077.pdb # 3: usage_00119.pdb # 4: usage_00157.pdb # 5: usage_00158.pdb # 6: usage_00220.pdb # 7: usage_00221.pdb # 8: usage_00222.pdb # 9: usage_00242.pdb # 10: usage_00244.pdb # 11: usage_00249.pdb # 12: usage_00250.pdb # 13: usage_00271.pdb # 14: usage_00272.pdb # 15: usage_00402.pdb # # Length: 111 # Identity: 48/111 ( 43.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/111 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/111 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -IVMTQSPATLSVSPGERATLSCRASESISSNLAWYQQKPGQAPRLFIYTASTRATDIPA 59 usage_00077.pdb 1 --VMTQSPDTLSVSPGETVTLSCRASQNINKNLAWYQYKPGQSPRLVIFETYSKIAAFPA 58 usage_00119.pdb 1 --VMTQSPATLSVSPGERATLSCRASESISSNLAWYQQKPGQAPRLFIYTASTRATDIPA 58 usage_00157.pdb 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 60 usage_00158.pdb 1 --VMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 58 usage_00220.pdb 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 60 usage_00221.pdb 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 60 usage_00222.pdb 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 60 usage_00242.pdb 1 DIQMTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPA 60 usage_00244.pdb 1 DIQMTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPA 60 usage_00249.pdb 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 60 usage_00250.pdb 1 --VMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 58 usage_00271.pdb 1 -IVLTQSPATLSASPGERVTLTCRASRSVRNNVAWYQHKGGQSPRLLIYDASTRAAGVPA 59 usage_00272.pdb 1 -IVLTQSPATLSVSPGERVTLSCRASQSVRNNLAWYRQKRGQAPRLLIYGASTRATGIPA 59 usage_00402.pdb 1 --VMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA 58 TQSP TLS SPGEr TLsCRAS s lAWYq K GQ PRL Iy as ra PA usage_00023.pdb 60 RFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPSITFGQGTRLEI---- 106 usage_00077.pdb 59 RFVASGSGTEFTLTINNMQSEDVAVYYCQQYEEWP--RTFGQGTKVDIKRT 107 usage_00119.pdb 59 RFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPSITFGQGTRLEI---- 105 usage_00157.pdb 61 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 108 usage_00158.pdb 59 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 106 usage_00220.pdb 61 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 108 usage_00221.pdb 61 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 108 usage_00222.pdb 61 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 108 usage_00242.pdb 61 RFSGSGSGTEFTLTISSLQSEDFAVYYCQQYDKWP--LTFGGGTKVEI--- 106 usage_00244.pdb 61 RFSGSGSGTEFTLTISSLQSEDFAVYYCQQYDKWP--LTFGGGTKVEI--- 106 usage_00249.pdb 61 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 108 usage_00250.pdb 59 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 106 usage_00271.pdb 60 RFSGSASGTEFTLAISNLESEDFTVYFCLQYNNW---WTFGQGTRVDI--- 104 usage_00272.pdb 60 RFSGSGSGTEFTLTISSMQSEDFAVYYCQQYNNW---WTFGQGTKVEI--- 104 usage_00402.pdb 59 RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEI--- 106 RFsgSgSG EFTLtIs qSEDfaVYyCqQY W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################