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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:11:35 2021
# Report_file: c_0325_9.html
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#====================================
# Aligned_structures: 5
#   1: usage_00087.pdb
#   2: usage_00096.pdb
#   3: usage_00099.pdb
#   4: usage_00100.pdb
#   5: usage_00239.pdb
#
# Length:        129
# Identity:      119/129 ( 92.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    127/129 ( 98.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            2/129 (  1.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00087.pdb         1  RLKNCCLIATQLLGLTAPEMTVLIGGLRVLGTNHGGTKHVVFTDREGVLTNDFFVNLTDM   60
usage_00096.pdb         1  -PEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM   59
usage_00099.pdb         1  TPEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM   60
usage_00100.pdb         1  -PEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM   59
usage_00239.pdb         1  TPEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM   60
                            peellLdrTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHgVFTDREGVLTNDFFVNLTDM

usage_00087.pdb        61  NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV  120
usage_00096.pdb        60  NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV  119
usage_00099.pdb        61  NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV  120
usage_00100.pdb        60  NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV  119
usage_00239.pdb        61  NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV  120
                           NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV

usage_00087.pdb       121  AAWTKVMN-  128
usage_00096.pdb       120  AAWTKVMN-  127
usage_00099.pdb       121  AAWTKVMN-  128
usage_00100.pdb       120  AAWTKVMN-  127
usage_00239.pdb       121  AAWTKVMNA  129
                           AAWTKVMN 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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