################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:41 2021 # Report_file: c_0357_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00035.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00054.pdb # 8: usage_00055.pdb # 9: usage_00056.pdb # 10: usage_00057.pdb # 11: usage_00058.pdb # 12: usage_00059.pdb # 13: usage_00060.pdb # 14: usage_00061.pdb # 15: usage_00077.pdb # 16: usage_00085.pdb # # Length: 117 # Identity: 55/117 ( 47.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/117 ( 49.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/117 ( 5.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 SKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLN 60 usage_00049.pdb 1 ----LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 56 usage_00050.pdb 1 ----LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 56 usage_00051.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00052.pdb 1 -AYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 59 usage_00053.pdb 1 -AYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 59 usage_00054.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00055.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00056.pdb 1 -AYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 59 usage_00057.pdb 1 ----LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 56 usage_00058.pdb 1 ----LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 56 usage_00059.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00060.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00061.pdb 1 --YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 58 usage_00077.pdb 1 ----KLVLIRGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQK 56 usage_00085.pdb 1 --YKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLN 58 l rhGE AWN ENRF W D L G EEA G L EFD FTSV usage_00035.pdb 61 RSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWR-- 115 usage_00049.pdb 57 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 111 usage_00050.pdb 57 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 111 usage_00051.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 113 usage_00052.pdb 60 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 114 usage_00053.pdb 60 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 114 usage_00054.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRS 115 usage_00055.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 113 usage_00056.pdb 60 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 114 usage_00057.pdb 57 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 111 usage_00058.pdb 57 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 111 usage_00059.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRS 115 usage_00060.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 113 usage_00061.pdb 59 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 113 usage_00077.pdb 57 RAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWR-- 111 usage_00085.pdb 59 RSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWR-- 113 R I T W L Q W PV WRLNERHYG L GLN A HGE QV WR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################