################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:55 2021 # Report_file: c_1227_286.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00366.pdb # 3: usage_00778.pdb # 4: usage_01245.pdb # 5: usage_01432.pdb # 6: usage_02192.pdb # 7: usage_02214.pdb # 8: usage_02790.pdb # 9: usage_02792.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 58 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 58 ( 81.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --A----------FRS---------------Q-GQSLTYQELWEQSDRAAAAIQKRI- 29 usage_00366.pdb 1 ---------A-IISAEP------KFPSEFPE-----SNFLEICEVTKKLASGISRKG- 36 usage_00778.pdb 1 ---------A-IIFEGDE-----PG------Q-GYSITYKELLEEVCQVAQVLTYSMG 36 usage_01245.pdb 1 ---AVISE-IVDDGQEV-EGRAVRA------A-PGMLRGDECVAFARRWG-------- 38 usage_01432.pdb 1 --------DR-VLQMED------FM------EDGIWVASSDYKNA------------- 24 usage_02192.pdb 1 AI------------ETA--------------A-GDKISYAELVARAGRVANVLVAR-- 29 usage_02214.pdb 1 ---------A-IIYEADE-----PS------E-SREVSYEELMQETCRVANVLKSYG- 35 usage_02790.pdb 1 ---------A-IIYEADE-----PS------E-SREVSYEELMQETCRVANVLKSYG- 35 usage_02792.pdb 1 ---------A-IIYEADE-----PS------E-SREVSYEELMQETCRVANVLKSY-- 34 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################