################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:03 2021 # Report_file: c_1399_241.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00519.pdb # 2: usage_00590.pdb # 3: usage_00738.pdb # 4: usage_00972.pdb # 5: usage_01499.pdb # # Length: 77 # Identity: 0/ 77 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 77 ( 10.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 77 ( 59.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00519.pdb 1 --------------------RADIHLVE-LLYYVEELDSSLISSFPL-LKALKTRISNL- 37 usage_00590.pdb 1 ---------------YFPAFEKVLKSHGQD-------YLVGN-----KLSRADIHLVELL 33 usage_00738.pdb 1 KDAKLALIKEKIKNRYFPAFEKVLKSHGQD-------YLVGN-----KLSRADIHLVELL 48 usage_00972.pdb 1 ---------------FPFFFKHILKAAL-A-------ETDGE-----FSLHEQTVLLLFL 32 usage_01499.pdb 1 ---------------YFPAFEKVLQSHGQD-------YLVGN-----KLSRADISLVELL 33 l g l l l usage_00519.pdb 38 ---------PTVKKFLQ 45 usage_00590.pdb 34 YYVEELD-SSLISSFP- 48 usage_00738.pdb 49 YYVEELD-SSLISSFP- 63 usage_00972.pdb 33 DHCFNSLEVDLIRSQV- 48 usage_01499.pdb 34 YYVEELD-SSLISNF-- 47 li f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################