################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:18 2021 # Report_file: c_0542_5.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00236.pdb # # Length: 188 # Identity: 174/188 ( 92.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 174/188 ( 92.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/188 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -TDFINYYDKFKVIVYNVLKKLPLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISS 59 usage_00014.pdb 1 YTDFINYYDKFKVIVYNVLKKL--------PVIEYYLNCIDYNVKKGKHIRGKILVLISS 52 usage_00236.pdb 1 YTDFINYYDKFKVIVYNVLKKL--------PVIEYYLNCIDYNVKKGKHIRGKILVLISS 52 TDFINYYDKFKVIVYNVLKKL PVIEYYLNCIDYNVKKGKHIRGKILVLISS usage_00013.pdb 60 LSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 119 usage_00014.pdb 53 L--AYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 110 usage_00236.pdb 53 LSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 112 L AYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF usage_00013.pdb 120 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF 179 usage_00014.pdb 111 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF 170 usage_00236.pdb 113 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF 172 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF usage_00013.pdb 180 SMVEMKTS 187 usage_00014.pdb 171 SMVEM--- 175 usage_00236.pdb 173 SMVEM--- 177 SMVEM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################