################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:07:25 2021 # Report_file: c_0145_7.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00034.pdb # 4: usage_00081.pdb # 5: usage_00336.pdb # 6: usage_00379.pdb # 7: usage_00427.pdb # 8: usage_00428.pdb # 9: usage_00429.pdb # 10: usage_00430.pdb # 11: usage_00431.pdb # 12: usage_00432.pdb # 13: usage_00433.pdb # 14: usage_00496.pdb # # Length: 135 # Identity: 55/135 ( 40.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/135 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/135 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 QVQLVESGGGLVQPGGSLRLSCAASGG--SEYSYSTFSLGWFRQAPGQGLEAVAAIASMG 58 usage_00004.pdb 1 QVQLVESGGGLVQPGGSLRLSCAASGG--SEYSYSTFSLGWFRQAPGQGLEAVAAIASMG 58 usage_00034.pdb 1 --QLQESGGGSVQAGGSLRLSCEASGL--S----T-TVMAWFRQAPGKEREGVAAIYTGD 51 usage_00081.pdb 1 --QLQESGGGSVQAGGSLRLSCGASE---Y----T-SRMGWFRQAPGAEREGVACIHRQS 50 usage_00336.pdb 1 DVQLVESGGGSVQAGGSLRLSCAASGYIAS----I-NYLGWFRQAPGKEREGVAAVSPAG 55 usage_00379.pdb 1 --QLQESGGGSVQAGGSLRLSCGASE---Y----T-SRMGWFRQAPGAEREGVACIHRQS 50 usage_00427.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00428.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00429.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00430.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00431.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00432.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00433.pdb 1 --QLVESGGGSVQAGGSLRLSCTASGG---S-SYSTFSLGWFRQAPGQEREAVAAIASMG 54 usage_00496.pdb 1 QVQLQESGGGSVQAGGSLRLSCAVSE---N----T-GRMGWFRQAPGKEREKVAIITRLG 52 QL ESGGG VQ GGSLRLSC aS gWFRQAPG E VA i usage_00003.pdb 59 GLTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVRGY---FMR---LPSS 112 usage_00004.pdb 59 GLTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVRGY---FMR---LPSS 112 usage_00034.pdb 52 GFPYYADSVKGRFTISQDNAKNRMYLQMNSLEPEDTAMYYCAAKTGA---FSYGSLWWMS 108 usage_00081.pdb 51 NLSYYSDSVRGRFTISQDNAKTTAFLLMSSLKPEDTAIYYCATTTDCAAFVE-----RA- 104 usage_00336.pdb 56 GTPYYADSVKGRFTVSLDNAENTVYLQMNSLKPEDTALYYCAAARQG---WYI---PLNS 109 usage_00379.pdb 51 NLSYYSDSVRGRFTISQDNAKTTAFLLMSSLKPEDTAIYYCATTTDCAAFVE-----RA- 104 usage_00427.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00428.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00429.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00430.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00431.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00432.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00433.pdb 55 GLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYCAAVRGY---FMR---LPSS 108 usage_00496.pdb 53 GYTSYAGPVKGRFTISQDNAKNTVYLLMNSLKPEDTAIYYCAADSRP---IY-----SG- 103 yY dsV GRFTiS DN k t L M L EDTA YYCA usage_00003.pdb 113 HNFRYWGQGTLVTVS 127 usage_00004.pdb 113 HNFRYWGQGTLVTVS 127 usage_00034.pdb 109 RAYNHWGQGTQVTVS 123 usage_00081.pdb 105 -TAITAGQGTQVTV- 117 usage_00336.pdb 110 YGYNYWGQGTQVTVS 124 usage_00379.pdb 105 -TAITAGQGTQVTV- 117 usage_00427.pdb 109 HNFRYWGQGTQVTVS 123 usage_00428.pdb 109 HNFRYWGQGTQVTVS 123 usage_00429.pdb 109 HNFRYWGQGTQVTVS 123 usage_00430.pdb 109 HNFRYWGQGTQVTVS 123 usage_00431.pdb 109 HNFRYWGQGTQVTVS 123 usage_00432.pdb 109 HNFRYWGQGTQVTVS 123 usage_00433.pdb 109 HNFRYWGQGTQVTVS 123 usage_00496.pdb 104 -TWRYWGQGTQVTVS 117 GQGT VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################