################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:05 2021 # Report_file: c_1297_57.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00089.pdb # 2: usage_00494.pdb # 3: usage_00496.pdb # 4: usage_00498.pdb # 5: usage_00501.pdb # 6: usage_00503.pdb # 7: usage_00505.pdb # 8: usage_00507.pdb # 9: usage_00509.pdb # 10: usage_00511.pdb # 11: usage_00513.pdb # # Length: 55 # Identity: 46/ 55 ( 83.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 55 ( 83.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 55 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 SPFDRNFGTKISARAMEWITAKLKE---------FTTDDSICVLGISKRNVIFQP 46 usage_00494.pdb 1 SPFDRNFGTKISARAMEWITAKLKEARGRGK--KFTTDDSICVLGISKRNVIFQP 53 usage_00496.pdb 1 SPFDRNFGTKISARAMEWITAKLKE---------FTTDDSICVLGISKRNVIFQP 46 usage_00498.pdb 1 SPFDRNFGTKISARAMEWITAKLKEA--------FTTDDSICVLGISKRNVIFQP 47 usage_00501.pdb 1 SPFDRNFGTKISARAMEWITAKLKEA-------KFTTDDSICVLGISKRNVIFQP 48 usage_00503.pdb 1 SPFDRNFGTKISARAMEWITAKLKE---------FTTDDSICVLGISKRNVIFQP 46 usage_00505.pdb 1 SPFDRNFGTKISARAMEWITAKLKEAR------KFTTDDSICVLGISKRNVIFQP 49 usage_00507.pdb 1 SPFDRNFGTKISARAMEWITAKLKEA-------KFTTDDSICVLGISKRNVIFQP 48 usage_00509.pdb 1 SPFDRNFGTKISARAMEWITAKLKEAR----GRKFTTDDSICVLGISKRNVIFQP 51 usage_00511.pdb 1 SPFDRNFGTKISARAMEWITAKLKEAR-------FTTDDSICVLGISKRNVIFQP 48 usage_00513.pdb 1 SPFDRNFGTKISARAMEWITAKLKEAR-------FTTDDSICVLGISKRNVIFQP 48 SPFDRNFGTKISARAMEWITAKLKE FTTDDSICVLGISKRNVIFQP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################