################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:39 2021 # Report_file: c_0875_3.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00811.pdb # # Length: 231 # Identity: 156/231 ( 67.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 156/231 ( 67.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 75/231 ( 32.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 DPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLE 60 usage_00038.pdb 1 -----------------------------DPTWKMIHSVLTLFVAVPSLMTAFTVAASLE 31 usage_00065.pdb 1 -------------LSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLE 47 usage_00066.pdb 1 -------------LSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLE 47 usage_00811.pdb 1 -------------LSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLE 47 DPTWKMIHSVLTLFVAVPSLMTAFTVAASLE usage_00037.pdb 61 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV 120 usage_00038.pdb 32 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV 91 usage_00065.pdb 48 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV 107 usage_00066.pdb 48 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV 107 usage_00811.pdb 48 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV 107 FAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWV usage_00037.pdb 121 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW 180 usage_00038.pdb 92 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW 151 usage_00065.pdb 108 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW 167 usage_00066.pdb 108 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW 167 usage_00811.pdb 108 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW 167 PGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHW usage_00037.pdb 181 AGLLN---------------------------------------------- 185 usage_00038.pdb 152 AGLLNVPRRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVL 202 usage_00065.pdb 168 AGLLN---------------------------------------------- 172 usage_00066.pdb 168 AGLLN---------------------------------------------- 172 usage_00811.pdb 168 AGLLN---------------------------------------------- 172 AGLLN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################