################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:44 2021 # Report_file: c_0083_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00062.pdb # 4: usage_00073.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00211.pdb # 8: usage_00214.pdb # 9: usage_00369.pdb # 10: usage_00385.pdb # 11: usage_00432.pdb # 12: usage_00435.pdb # # Length: 253 # Identity: 130/253 ( 51.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 139/253 ( 54.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 114/253 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb ------------------------------------------------------------ usage_00007.pdb 1 -P-EYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 58 usage_00062.pdb 1 --PEYIQ--LPPLIQKWN-LKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 55 usage_00073.pdb 1 KP-EYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 59 usage_00129.pdb 1 ---------MPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 51 usage_00130.pdb 1 KP-EYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 59 usage_00211.pdb 1 ----------PPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 50 usage_00214.pdb 1 KP-EYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 59 usage_00369.pdb 1 ------------------------------------------------CEPVYQRCVNLV 12 usage_00385.pdb 1 --------------------KDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 40 usage_00432.pdb 1 KP-EYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 59 usage_00435.pdb 1 --------------------KDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV 40 usage_00006.pdb 1 ------------QPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 44 usage_00007.pdb 59 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 114 usage_00062.pdb 56 QKTLAQA-LNNAQPDQYEAPDKDF-IVALDLLSGLAEGLGGNIEQLVARSNILTLYQCQD 113 usage_00073.pdb 60 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 115 usage_00129.pdb 52 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 107 usage_00130.pdb 60 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 115 usage_00211.pdb 51 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 106 usage_00214.pdb 60 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 115 usage_00369.pdb 13 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 68 usage_00385.pdb 41 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 96 usage_00432.pdb 60 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 115 usage_00435.pdb 41 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLM---- 96 QPDQYEAPDKDF IVALDLLSGLAEGLGGNIEQLVARSNILTLm usage_00006.pdb 45 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 104 usage_00007.pdb 115 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 174 usage_00062.pdb 114 -------KPEVRQSSFALLGDLTKACFQHVKPCIADF-PILGTNLNPEFISVCNNATWAI 165 usage_00073.pdb 116 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 175 usage_00129.pdb 108 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 167 usage_00130.pdb 116 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 175 usage_00211.pdb 107 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 166 usage_00214.pdb 116 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 175 usage_00369.pdb 69 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 128 usage_00385.pdb 97 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 156 usage_00432.pdb 116 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 175 usage_00435.pdb 97 YQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAI 156 mPEVRQSSFALLGDLTKACFQHVKPCIADF PILGTNLNPEFISVCNNATWAI usage_00006.pdb 105 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQ 163 usage_00007.pdb 175 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCP-------- 225 usage_00062.pdb 166 GEISIQGIEQPY----IPVLHQLVEIINRPNTPKTLLENTAITIGRLGYVC--------- 212 usage_00073.pdb 176 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYV---------- 224 usage_00129.pdb 168 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEV----- 221 usage_00130.pdb 176 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVC--------- 225 usage_00211.pdb 167 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQ 225 usage_00214.pdb 176 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCP-------- 226 usage_00369.pdb 129 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQ 187 usage_00385.pdb 157 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY----------- 204 usage_00432.pdb 176 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCP-------- 226 usage_00435.pdb 157 GEISIQM-GIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY----------- 204 GEISIQm giem pmVLHQLVEIINRPNTPKTLLENTAITIGRLGY usage_00006.pdb 164 QFIRPWCTSLRNI 176 usage_00007.pdb ------------- usage_00062.pdb ------------- usage_00073.pdb ------------- usage_00129.pdb ------------- usage_00130.pdb ------------- usage_00211.pdb 226 Q------------ 226 usage_00214.pdb ------------- usage_00369.pdb 188 QFIRPWCTSLRNI 200 usage_00385.pdb ------------- usage_00432.pdb ------------- usage_00435.pdb ------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################