################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:50 2021 # Report_file: c_1151_69.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00007.pdb # 2: usage_00038.pdb # 3: usage_00329.pdb # 4: usage_00417.pdb # 5: usage_00428.pdb # 6: usage_00495.pdb # 7: usage_00762.pdb # 8: usage_00763.pdb # 9: usage_00764.pdb # 10: usage_00842.pdb # 11: usage_00843.pdb # 12: usage_00906.pdb # 13: usage_00979.pdb # 14: usage_01021.pdb # 15: usage_01242.pdb # 16: usage_01277.pdb # 17: usage_01318.pdb # 18: usage_01492.pdb # # Length: 39 # Identity: 2/ 39 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 39 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 39 ( 59.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --KTTPPSVYPLA--P-------SM-VTLGCLVKG---- 23 usage_00038.pdb 1 --KTTPPSVYPLA--PGSAAQTNSM-VTLGCLVKG---- 30 usage_00329.pdb 1 --KTTPPSVYPLA--PG-----NSM-VTLGCLVKG---- 25 usage_00417.pdb 1 SAKTTPPSVYPLA--PGSAAAAASM-VTLGCLVKG---- 32 usage_00428.pdb 1 AASTTPPSVYPLA--PGSG-GAGSM-VTLGCLVKG---- 31 usage_00495.pdb 1 --TEEVNVTMELLGAS-G----SGS-NGMQRLSFVEHK- 30 usage_00762.pdb 1 AAKTTPPSVYPLA--PGSAAQTNSM-VTLGCLVKG---- 32 usage_00763.pdb 1 --KTTPPSVYPLA--PGSAAQTNSM-VTLGCLVKG-YFP 33 usage_00764.pdb 1 --KTTPPSVYPLA--PGSAAQTNSM-VTLGCLVKG-YFP 33 usage_00842.pdb 1 -------SVYPLA--PVCGDTTGSS-VTLGCLVKG---- 25 usage_00843.pdb 1 -------SVYPLA--PVCGDTTGSS-VTLGCLVKG---- 25 usage_00906.pdb 1 --KTTAPSVYPLA--PVCGDTTGSS-VTLGCLVKG---- 30 usage_00979.pdb 1 --ETTAPSVYPLA--PGTALKSNSM-VTLGCLVKG---- 30 usage_01021.pdb 1 --KTTAPSVYPLA--P---------VVTLGCLVKG---- 22 usage_01242.pdb 1 --KTTPPSVYPLA--PGCGDAAGSS-VTLGCLVKG---- 30 usage_01277.pdb 1 -------SVYPLA--PVCGDTTGSS-VTLGCLVKG---- 25 usage_01318.pdb 1 SAKTTAPSVYPLA--PVC------S-VTLGCLVKG---- 26 usage_01492.pdb 1 ---TTPPSVYPLA--PGSAAQTNSM-VTLGCLVKG---- 29 svypLa p vtlgcLvkg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################