################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:28 2021 # Report_file: c_1295_29.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00117.pdb # 2: usage_00203.pdb # 3: usage_00204.pdb # 4: usage_00205.pdb # 5: usage_00206.pdb # 6: usage_00207.pdb # 7: usage_00208.pdb # 8: usage_00293.pdb # 9: usage_00294.pdb # 10: usage_00333.pdb # 11: usage_00334.pdb # 12: usage_00379.pdb # # Length: 28 # Identity: 8/ 28 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 28 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 28 ( 3.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 NDKLIELSNSNENWVMPGKNYDSNNYST 28 usage_00203.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00204.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00205.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00206.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00207.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00208.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00293.pdb 1 NDELIKLEKEPGQWVMQNKNYANTRYSE 28 usage_00294.pdb 1 NDELIKLEKEPGQWVMQNKNYANTRYSE 28 usage_00333.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00334.pdb 1 NDKLVELSKSDDNWVMPGKNYDSNNFSD 28 usage_00379.pdb 1 -DQLVELAKDPANWVMTGRDYNAQNYSE 27 D L L k WVM knY S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################