################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:43 2021 # Report_file: c_0097_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00038.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # 9: usage_00069.pdb # 10: usage_00094.pdb # 11: usage_00095.pdb # 12: usage_00101.pdb # 13: usage_00110.pdb # 14: usage_00114.pdb # # Length: 179 # Identity: 30/179 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/179 ( 32.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/179 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 59 usage_00036.pdb 1 RAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWA 60 usage_00037.pdb 1 RAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWA 60 usage_00038.pdb 1 RAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWA 60 usage_00064.pdb 1 ESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 60 usage_00065.pdb 1 ESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 60 usage_00067.pdb 1 ESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 60 usage_00068.pdb 1 ESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 60 usage_00069.pdb 1 ESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 60 usage_00094.pdb 1 KGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWA 60 usage_00095.pdb 1 KGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWA 60 usage_00101.pdb 1 VGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQ--S-NLNLDAKVTIQKAYSD 57 usage_00110.pdb 1 QTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWG 60 usage_00114.pdb 1 -SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWA 59 l dy sG L D paSlTK MTsyV g d V aw usage_00002.pdb 60 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 108 usage_00036.pdb 61 ----TGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVA-------GSQ 109 usage_00037.pdb 61 ----TGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVA-------GSQ 109 usage_00038.pdb 61 ----TGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVA-------GSQ 109 usage_00064.pdb 61 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 109 usage_00065.pdb 61 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 109 usage_00067.pdb 61 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 109 usage_00068.pdb 61 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 109 usage_00069.pdb 61 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 109 usage_00094.pdb 61 ----K-N--FPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVA-------GTE 106 usage_00095.pdb 61 ----K-N--FPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVA-------GTE 106 usage_00101.pdb 58 YVVA------NNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAA-RV 110 usage_00110.pdb 61 ----R-N--FPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHIS-------GNV 106 usage_00114.pdb 60 ----TGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAA-------GSQ 108 sS mf g V V L G SGnDA A A usage_00002.pdb 109 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 166 usage_00036.pdb 110 ESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHK- 167 usage_00037.pdb 110 ESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHK- 167 usage_00038.pdb 110 ESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHK- 167 usage_00064.pdb 110 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 167 usage_00065.pdb 110 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYS---- 164 usage_00067.pdb 110 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 167 usage_00068.pdb 110 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 167 usage_00069.pdb 110 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 167 usage_00094.pdb 107 DAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYS- 164 usage_00095.pdb 107 DAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYS- 164 usage_00101.pdb 111 KSFIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIASSAMK-NSTFRTVVKT 168 usage_00110.pdb 107 PNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYS- 164 usage_00114.pdb 109 DAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYK- 166 F MN lG N F hGld S D a g i p ey #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################