################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:40:03 2021 # Report_file: c_1219_167.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00195.pdb # 2: usage_00238.pdb # 3: usage_00304.pdb # 4: usage_00347.pdb # 5: usage_00423.pdb # 6: usage_00572.pdb # 7: usage_00617.pdb # 8: usage_00618.pdb # 9: usage_00634.pdb # 10: usage_00822.pdb # 11: usage_01257.pdb # 12: usage_01270.pdb # 13: usage_01271.pdb # 14: usage_01277.pdb # 15: usage_01290.pdb # 16: usage_01314.pdb # 17: usage_01382.pdb # 18: usage_01783.pdb # 19: usage_01786.pdb # 20: usage_01796.pdb # 21: usage_01841.pdb # 22: usage_01886.pdb # 23: usage_01940.pdb # 24: usage_02079.pdb # 25: usage_02128.pdb # 26: usage_02150.pdb # 27: usage_02175.pdb # # Length: 42 # Identity: 3/ 42 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 42 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 42 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00195.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_00238.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 33 usage_00304.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKDFAC-ANAFN--- 30 usage_00347.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKDFAC-ANAFN--- 30 usage_00423.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFNNS- 33 usage_00572.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_00617.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFNN-- 34 usage_00618.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFNN-- 34 usage_00634.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 33 usage_00822.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 33 usage_01257.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFNN-- 32 usage_01270.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSNKSDFACANAFNNS- 35 usage_01271.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSN---FACANAFN--- 30 usage_01277.pdb 1 ------TVLDMR--SMDFKSNSAVAWSNKSDFACANAFNN-- 32 usage_01290.pdb 1 ------CVLDMR--SMDFKSNSAVAWS-D--FACANAFNN-- 29 usage_01314.pdb 1 ----DKCVLDMR--SMDFKSNSAVAWSND--FACANAFNN-- 32 usage_01382.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNK--FACANAFN--- 29 usage_01783.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFNN-- 32 usage_01786.pdb 1 ------CVLDMR--SMDFKSNSAVAWS----FACANAFN--- 27 usage_01796.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_01841.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_01886.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFNNS- 33 usage_01940.pdb 1 -------SYDNGNGIVPSYLCEPVFAD-A-----TN-----Y 24 usage_02079.pdb 1 VYITDKCVLDMR--SMDFKSNSAVAWSN---FACANAFNN-- 35 usage_02128.pdb 1 ------TVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_02150.pdb 1 ------TVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 usage_02175.pdb 1 ------CVLDMR--SMDFKSNSAVAWSNKSDFACANAFN--- 31 vlDmr smdfksnsaVaws aN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################