################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:54 2021 # Report_file: c_1480_91.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01574.pdb # 2: usage_01575.pdb # 3: usage_01576.pdb # 4: usage_01577.pdb # 5: usage_01589.pdb # 6: usage_01591.pdb # 7: usage_02755.pdb # 8: usage_02756.pdb # 9: usage_03501.pdb # 10: usage_03502.pdb # 11: usage_03506.pdb # # Length: 56 # Identity: 13/ 56 ( 23.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 56 ( 23.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 56 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01574.pdb 1 DDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 56 usage_01575.pdb 1 DDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 56 usage_01576.pdb 1 -DEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 55 usage_01577.pdb 1 -DEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 55 usage_01589.pdb 1 ---------------KIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 41 usage_01591.pdb 1 ---------------KIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 41 usage_02755.pdb 1 DNETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVG 56 usage_02756.pdb 1 --------------TIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVG 42 usage_03501.pdb 1 DDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEY-- 54 usage_03502.pdb 1 DDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEY-- 54 usage_03506.pdb 1 --------------DKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSG 42 LPF K RW F GE K W W E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################