################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:26:31 2021 # Report_file: c_0189_25.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00227.pdb # 2: usage_00228.pdb # 3: usage_00229.pdb # 4: usage_00230.pdb # 5: usage_00231.pdb # 6: usage_00232.pdb # 7: usage_00233.pdb # 8: usage_00234.pdb # 9: usage_00302.pdb # 10: usage_00339.pdb # 11: usage_00341.pdb # 12: usage_00342.pdb # 13: usage_00343.pdb # 14: usage_00344.pdb # 15: usage_00382.pdb # 16: usage_00383.pdb # 17: usage_00432.pdb # 18: usage_00441.pdb # 19: usage_00662.pdb # 20: usage_00663.pdb # # Length: 238 # Identity: 164/238 ( 68.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 169/238 ( 71.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/238 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00227.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00228.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00229.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00230.pdb 1 ---------SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 51 usage_00231.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00232.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00233.pdb 1 ---------SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 51 usage_00234.pdb 1 ---------SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 51 usage_00302.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00339.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00341.pdb 1 SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFT 60 usage_00342.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00343.pdb 1 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFT 60 usage_00344.pdb 1 --RQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFT 58 usage_00382.pdb 1 ---------SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 51 usage_00383.pdb 1 ---------SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 51 usage_00432.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00441.pdb 1 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 60 usage_00662.pdb 1 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFT 60 usage_00663.pdb 1 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFT 60 SEASIMGQF HPNIIRLEGVVT S PVMIlTEFMEN ALDSFLRlNDGQFT usage_00227.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 105 usage_00228.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 105 usage_00229.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 105 usage_00230.pdb 52 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLE---- 104 usage_00231.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLE---- 113 usage_00232.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLE---- 113 usage_00233.pdb 52 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLE---- 104 usage_00234.pdb 52 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLE---- 104 usage_00302.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFL----- 112 usage_00339.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 105 usage_00341.pdb 61 VIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSR---------- 110 usage_00342.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRFLESSL- 116 usage_00343.pdb 61 VIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD-FG---EDDPS---- 112 usage_00344.pdb 59 VIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD-FG---EDDPS---- 110 usage_00382.pdb 52 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 96 usage_00383.pdb 52 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 96 usage_00432.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSD--------------- 105 usage_00441.pdb 61 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---SRF------ 111 usage_00662.pdb 61 VIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD-FG--LEDDPS---- 113 usage_00663.pdb 61 VIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD-FG--LSRFLE---D 114 VIQLVGMLRGIA GM YL EM YVHRDLAARNILVNSNLVCKVSD usage_00227.pdb 106 ----------------F-IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 148 usage_00228.pdb 106 ----------------FKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 149 usage_00229.pdb 106 ----------------F-IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 148 usage_00230.pdb 105 ---ENSSD-----GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 154 usage_00231.pdb 114 ---ENSSD-----GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 163 usage_00232.pdb 114 ---ENSSD-----GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 163 usage_00233.pdb 105 ---ENSSD-----G---KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 153 usage_00234.pdb 105 ---ENSSD-----GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 154 usage_00302.pdb 113 -------------GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 157 usage_00339.pdb 106 ----------------FGIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 149 usage_00341.pdb 111 -------------------PVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWD 151 usage_00342.pdb 117 -------------GG--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 161 usage_00343.pdb 113 ---DP---TYTSS----KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 162 usage_00344.pdb 111 ---DP---TYTSS----KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 160 usage_00382.pdb 97 ----------------F--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPYWD 138 usage_00383.pdb 97 ----------------F--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPYWD 138 usage_00432.pdb 106 ----------------FGIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 149 usage_00441.pdb 112 --------------G--KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 155 usage_00662.pdb 114 ---DP---TYTSSLGG-KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 166 usage_00663.pdb 115 DPSDP---TYTSSLGG-KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 170 PiRWTAPEAIA RKFTSASD WSYGIVMWEVMS GERPYWD usage_00227.pdb 149 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI--- 203 usage_00228.pdb 150 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 206 usage_00229.pdb 149 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 205 usage_00230.pdb 155 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI--- 209 usage_00231.pdb 164 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 220 usage_00232.pdb 164 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 220 usage_00233.pdb 154 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 210 usage_00234.pdb 155 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 211 usage_00302.pdb 158 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 214 usage_00339.pdb 150 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 206 usage_00341.pdb 152 MSNQDVINAIEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRN- 208 usage_00342.pdb 162 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 218 usage_00343.pdb 163 MSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRN- 219 usage_00344.pdb 161 MSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRN- 217 usage_00382.pdb 139 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQIVSALDKMIRN- 195 usage_00383.pdb 139 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQIVSALDKMIRN- 195 usage_00432.pdb 150 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNP 207 usage_00441.pdb 156 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN- 212 usage_00662.pdb 167 MSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRN- 223 usage_00663.pdb 171 MSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRN- 227 MSNQDVINA EQDYRLPPP DCPt LHQLMLDCW DRN RP F q V LDK I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################