################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:23 2021 # Report_file: c_0650_8.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00013.pdb # 2: usage_00092.pdb # 3: usage_00287.pdb # 4: usage_00337.pdb # 5: usage_00548.pdb # 6: usage_00658.pdb # 7: usage_00659.pdb # 8: usage_00665.pdb # 9: usage_00666.pdb # 10: usage_00667.pdb # 11: usage_00668.pdb # 12: usage_00888.pdb # 13: usage_00997.pdb # 14: usage_01023.pdb # 15: usage_01029.pdb # # Length: 124 # Identity: 13/124 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/124 ( 22.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 75/124 ( 60.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GLHGFHIHENPSCEPKEKEGKLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 usage_00092.pdb 1 GLHGFHVHALGDTTN---------GCMSTGPHFNPAGK-EHGSPEDETRHAGDLGNITVG 50 usage_00287.pdb 1 GLHGFHVHEFGDNTA---------GATSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_00337.pdb 1 GKHGFHVHEFGDTTN---------GCTSAGAHFNPTKQ-EHGAPEDSIRHVGDLGNVVAG 50 usage_00548.pdb 1 -LHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 49 usage_00658.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_00659.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_00665.pdb 1 -LFGFHVHG-----------------------A----------------G-GDLGNVTAD 19 usage_00666.pdb 1 -LFGFHVHG-----------------------A----------------G-GDLGNVTAD 19 usage_00667.pdb 1 -LFGFHVHG-----------------------A----------------G-GDLGNVTAD 19 usage_00668.pdb 1 -LFGFHVH--------------------------------------------DLGNVTAD 15 usage_00888.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_00997.pdb 1 GLHGFHVHEFGDNTA---------GSTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_01023.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_01029.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 l GFHvH DLgn t usage_00013.pdb 60 HDGTATNPVLAPRLKH--LDDVRGHSIMIHTGGDNHS-DHPA----PLGGGGPRMACGV- 111 usage_00092.pdb 51 DDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKG-GHELSKSTGNAGGRIACGI- 108 usage_00287.pdb 51 KDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLAAGV- 108 usage_00337.pdb 51 ADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRG-GHELSKVTGNAGGRLACGVV 109 usage_00548.pdb 50 KDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGVT 108 usage_00658.pdb 51 KDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGVI 109 usage_00659.pdb 51 KDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGVI 109 usage_00665.pdb 20 KDGVADVSIEDSVISLSGDHSIIGRTLVVHEKAG--------------AGAGSRLASGVI 65 usage_00666.pdb 20 -KGVADVSIEDSVISLSGDHSIIGRTLVVH-EK----------------A-GSRLASGV- 59 usage_00667.pdb 20 KDGVADVSIEDSVISLSGDHSIIGRTLVVH-E---------------------RLASGV- 56 usage_00668.pdb 16 KDGVADVSIEDSVISLSGDHSIIGRTLVVH-E--------------------SRLASGV- 53 usage_00888.pdb 51 KDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGV- 108 usage_00997.pdb 51 KDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGV- 108 usage_01023.pdb 51 KDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGVI 109 usage_01029.pdb 51 KDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG-GNEESTKTGNAGSRLACGV- 108 dG A d i l h iiGr v H R A Gv usage_00013.pdb ---- usage_00092.pdb ---- usage_00287.pdb ---- usage_00337.pdb 110 GLAA 113 usage_00548.pdb 109 GIAQ 112 usage_00658.pdb 110 GIAQ 113 usage_00659.pdb 110 GIAQ 113 usage_00665.pdb 66 GIA- 68 usage_00666.pdb ---- usage_00667.pdb ---- usage_00668.pdb ---- usage_00888.pdb ---- usage_00997.pdb ---- usage_01023.pdb 110 GIAQ 113 usage_01029.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################