################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:12 2021 # Report_file: c_0673_236.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00048.pdb # 2: usage_00219.pdb # 3: usage_00220.pdb # 4: usage_00717.pdb # 5: usage_01552.pdb # 6: usage_01553.pdb # 7: usage_01773.pdb # 8: usage_01774.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 68 ( 44.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 68 ( 55.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 ------------VPTPVQRGALVLIHGEVVHKSKQNLS--DRSR---QAYTFHLMEASGT 43 usage_00219.pdb 1 ------------ANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTVIA-ADMV 41 usage_00220.pdb 1 TAVNPNTGEGQYANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTV------- 47 usage_00717.pdb 1 ------------ANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTVIA-ADMV 41 usage_01552.pdb 1 TAVNPNTGEGQYANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTV------- 47 usage_01553.pdb 1 TAVNPNTGEGQYANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTV------- 47 usage_01773.pdb 1 ------------ANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTVIA-ADMV 41 usage_01774.pdb 1 ------------ANVTLTPGKRHRLRIL------NTSTENHFQVSLVNHTMTVIA-ADMV 41 anvtltpGkrhrlril ntst hfqv nhtmtv usage_00048.pdb 44 TWS----- 46 usage_00219.pdb 42 PVNAMTVD 49 usage_00220.pdb -------- usage_00717.pdb 42 PVN----- 44 usage_01552.pdb -------- usage_01553.pdb -------- usage_01773.pdb 42 PVNAMTVD 49 usage_01774.pdb 42 PVNAMTVD 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################