################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:05 2021 # Report_file: c_0247_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00106.pdb # 2: usage_00107.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00115.pdb # 8: usage_00123.pdb # 9: usage_00126.pdb # 10: usage_00127.pdb # # Length: 168 # Identity: 30/168 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/168 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/168 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 DAIVNAANTRCLGG-----GGVDGAIHRVAGPLLLRECATFN----G-CQTGECRLTKGY 50 usage_00107.pdb 1 DAIVNAANTRCLGG-----GGVDGAIHRVAGPLLLRECATFN----G-CQTGECRLTKGY 50 usage_00108.pdb 1 DAIVNAANTRCLGG-----GGVDGAIHRVAGPLLLRECATFN----G-CQTGECRLTKGY 50 usage_00109.pdb 1 DAIVNAANTRCLGG-----GGVDGAIHRVAGPLLLRECATFN----G-CQTGECRLTKGY 50 usage_00110.pdb 1 DAIVNAANTRCLGG-----GGVDGAIHRVAGPLLLRECATFN----G-CQTGECRLTKGY 50 usage_00111.pdb 1 DAIVNAANKTCLGG-----KGVDGAIHAAAGPLLVRECATFK----G-CDTGQCRLTKGY 50 usage_00115.pdb 1 TAIVNTSNESLTDK-----NPVSESIFMLAGPDLKEDLQKLK----G-CRTGEAKLTKGF 50 usage_00123.pdb 1 DAIVNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKKTRGY 60 usage_00126.pdb 1 DAIVNAANASLLGG-----GGVDGCIHRAAGPCLLAECRNLN----G-CDTGHAKITCGY 50 usage_00127.pdb 1 DAIVNAANASLLGG-----GGVDGCIHRAAGPCLLAECRNLN----G-CDTGHAKITCGY 50 dAIVNaaN lg vd Ih AGp l c g c tG T Gy usage_00106.pdb 51 QLPARYVLHTVGPVGE--------RPDMLRKCYRSILSLALKNGLRSIGFCCVSTGVYGY 102 usage_00107.pdb 51 QLPARYVLHTVGPVGE--------RPDMLRKCYRSILSLALKNGLRSIGFCCVSTGVYGY 102 usage_00108.pdb 51 QLPARYVLHTVGPVGE--------RPDMLRKCYRSILSLALKNGLRSIGFCCVSTGVYGY 102 usage_00109.pdb 51 QLPARYVLHTVGPVGE--------RPDMLRKCYRSILSLALKNGLRSIGFCCVSTGVYGY 102 usage_00110.pdb 51 QLPARYVLHTVGPVGE--------RPDMLRKCYRSILSLALKNGLRSIGFCCVSTGVYGY 102 usage_00111.pdb 51 NLPARYVLHTVGPIGE--------RPEELRSCYRSILSLAHRNRLRSIGFCCVSTGVYGY 102 usage_00115.pdb 51 NLAARFIIHTVGPKY-KS-RYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGY 108 usage_00123.pdb 61 NLPAKYIIHTVGPQI-RRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAF 119 usage_00126.pdb 51 DLPAKYVIHTVGPIA-RG-HINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGF 108 usage_00127.pdb 51 DLPAKYVIHTVGPIA-RG-HINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGF 108 LpA y HTVGP L CY s L L s F c stg g usage_00106.pdb 103 PLLPATRIALGETRKFLEEHGGALDMCCFACFQEDEYKTYEKCVG--- 147 usage_00107.pdb 103 PLLPATRIALGETRKFLEEHGGALDMCCFACFQEDEYKTYEKCVG--- 147 usage_00108.pdb 103 PLLPATRIALGETRKFLEEHGGALDMCCFACFQEDEYKTYEKCVG--- 147 usage_00109.pdb 103 PLLPATRIALGETRKFLEEHGGALDMCCFACFQEDEYKTYEKCVG--- 147 usage_00110.pdb 103 PLLPATRIALGETRKFLEEHGGALDMCCFACFQEDEYKTYEKCVG--- 147 usage_00111.pdb 103 PLIPATRIAVDETIEYLKQHFSAFDLCCFACFKLEEYNAYTDCLRAWL 150 usage_00115.pdb 109 PLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKL------ 150 usage_00123.pdb 120 PQDEAAEIAVRTVESYLKETNS-TLKVVFNVFTDKDLQLYKEALN--- 163 usage_00126.pdb 109 PNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKK----- 151 usage_00127.pdb 109 PNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKK----- 151 P A IA L F f y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################