################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:56 2021 # Report_file: c_1409_6.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00701.pdb # 2: usage_00702.pdb # 3: usage_00703.pdb # 4: usage_00704.pdb # 5: usage_00707.pdb # 6: usage_00708.pdb # 7: usage_00709.pdb # 8: usage_00710.pdb # 9: usage_00711.pdb # 10: usage_00712.pdb # 11: usage_00713.pdb # 12: usage_00714.pdb # 13: usage_00715.pdb # 14: usage_00717.pdb # # Length: 88 # Identity: 67/ 88 ( 76.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/ 88 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 88 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00701.pdb 1 -KVERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 59 usage_00702.pdb 1 --VERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 58 usage_00703.pdb 1 --VERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 58 usage_00704.pdb 1 SKVERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 60 usage_00707.pdb 1 --VERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 58 usage_00708.pdb 1 -KVERKNSDMKRLLTKLLVGRPTKWYDLLPVVQLAMNNTYSPVLKYTPHQLLFGIDSNTP 59 usage_00709.pdb 1 SKVERKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 58 usage_00710.pdb 1 SKVERKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 58 usage_00711.pdb 1 ----RKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 54 usage_00712.pdb 1 ----RKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 54 usage_00713.pdb 1 -KVERKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 57 usage_00714.pdb 1 --VERKNSD-KRLLTKLLVGRPTKWYDLLPVVQLA-NNTYSPVLKYTPHQLLFGIDSNTP 56 usage_00715.pdb 1 SKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGI----- 55 usage_00717.pdb 1 SKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTP 60 RKNSD KRLLTKLLVGRPTKWYDLLPVVQLA NNTYSPVLKYTPHQLLFGI usage_00701.pdb 60 FANQDTLDLTREEELSLLQEIRT----- 82 usage_00702.pdb 59 FANQDTLDLTREEELSLLQEIRTSL--- 83 usage_00703.pdb 59 FANQDTLDLTREEELSLLQEIRTS---- 82 usage_00704.pdb 61 FANQDTLDLTREEELSLLQEIRTSLYH- 87 usage_00707.pdb 59 FANQDTLDLTREEELSLLQEIRTS---- 82 usage_00708.pdb 60 FANQDTLDLTREEELSLLQEIRTSL--- 84 usage_00709.pdb 59 FANQDTLDLTREEELSLLQEIRT----- 81 usage_00710.pdb 59 FANQDTLDLTREEELSLLQEIRTSL--- 83 usage_00711.pdb 55 FANQDTLDLTREEELSLLQEIRTSL--- 79 usage_00712.pdb 55 FANQDTLDLTREEELSLLQEIRT----- 77 usage_00713.pdb 58 FANQDTLDLTREEELSLLQEIRTSL--- 82 usage_00714.pdb 57 FANQDTLDLTREEELSLLQEIRT----- 79 usage_00715.pdb 56 --D--TLDLTREEELSLLQEIRTSL--- 76 usage_00717.pdb 61 FANQDTLDLTREEELSLLQEIRTSLYHP 88 n TLDLTREEELSLLQEIRT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################