################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:39 2021 # Report_file: c_1338_18.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00366.pdb # 2: usage_00397.pdb # 3: usage_00452.pdb # 4: usage_00665.pdb # 5: usage_00666.pdb # 6: usage_00780.pdb # 7: usage_00788.pdb # 8: usage_00854.pdb # 9: usage_00868.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 58 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 58 ( 72.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00366.pdb 1 ---EELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLK---------RALREQYK- 45 usage_00397.pdb 1 ------NEHLLKAGFAKWQLPDAYVF---------GKFLK---------RALREQY-- 32 usage_00452.pdb 1 -TEDEVKDFIS-KQVIFYKRIKRVFFVDAIPKSPSGKILR---------KDLRAKL-- 45 usage_00665.pdb 1 -A-DALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLR---------RQLVQQV-- 45 usage_00666.pdb 1 SA-DALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLR---------RQLVQQV-- 46 usage_00780.pdb 1 -S-PKHFVH---LAGK-----------------STLKDW-KRAIRLGGIMLRKMMDSG 35 usage_00788.pdb 1 -A-DALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLR---------RQLVQQV-- 45 usage_00854.pdb 1 -TEDEVKDFIS-KQVIFYKRIKRVFFVDAIPKSPSGKILR---------KDLRAKL-- 45 usage_00868.pdb 1 -P-DLWLSQCKQ-QLNPTFVPKRWYAIEQLPR----KTDI---------KALQQQLA- 41 K l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################