################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:24 2021 # Report_file: c_0470_40.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00146.pdb # 2: usage_00147.pdb # 3: usage_00149.pdb # 4: usage_00311.pdb # 5: usage_00312.pdb # 6: usage_00475.pdb # 7: usage_00476.pdb # 8: usage_00592.pdb # 9: usage_00594.pdb # 10: usage_00595.pdb # 11: usage_00596.pdb # # Length: 84 # Identity: 48/ 84 ( 57.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 84 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 84 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT------- 53 usage_00147.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV------ 54 usage_00149.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDD-EFR 59 usage_00311.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV------ 54 usage_00312.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT------- 53 usage_00475.pdb 1 GTVPAAKIFV-GAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDGEYQ 59 usage_00476.pdb 1 GTVPAAKIFV-GAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIA------- 52 usage_00592.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFI-------- 52 usage_00594.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT----EFR 56 usage_00595.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV--EEFR 58 usage_00596.pdb 1 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT---EEFR 57 GTVP A V G GVAGLQAIATA RLGAVV ATDVR A KEQV SLG KFI usage_00146.pdb 54 -KQAEAVLKELVKTDIAITTALIP 76 usage_00147.pdb 55 -KQAEAVLKELVKTDIAITTALIP 77 usage_00149.pdb 60 KKQAEAVLKELVKTDIAITTALIP 83 usage_00311.pdb 55 KKQAEAVLKELVKTDIAITT---- 74 usage_00312.pdb 54 -KQAEAVLKELVKTDIAITTALIP 76 usage_00475.pdb 60 VKQAALVAEHIAKQDIVITTALIP 83 usage_00476.pdb 53 ---AALVAEHIAKQDIVITTALIP 73 usage_00592.pdb 53 -KQAEAVLKELVKTDIAITTALIP 75 usage_00594.pdb 57 KKQAEAVLKELVKTDIAITT---- 76 usage_00595.pdb 59 KKQAEAVLKELVKTDIAITT---- 78 usage_00596.pdb 58 KKQAEAVLKELVKTDIAITT---- 77 A V K DI ITT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################