################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:45 2021 # Report_file: c_1484_95.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_03093.pdb # 2: usage_03094.pdb # 3: usage_03095.pdb # 4: usage_03096.pdb # 5: usage_04664.pdb # 6: usage_04723.pdb # 7: usage_04724.pdb # # Length: 61 # Identity: 2/ 61 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 61 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 61 ( 67.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03093.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 usage_03094.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 usage_03095.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 usage_03096.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 usage_04664.pdb 1 DVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKG------------------------ 36 usage_04723.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 usage_04724.pdb 1 ---------------AVKTIQQHLGQLNMLHRRSG-LPRPSDSNAVSLVMRRIRKENVDA 44 avKTiqqhlgqlnmlhrrsg usage_03093.pdb 45 G 45 usage_03094.pdb 45 G 45 usage_03095.pdb 45 G 45 usage_03096.pdb 45 G 45 usage_04664.pdb - usage_04723.pdb 45 G 45 usage_04724.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################