################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:29 2021 # Report_file: c_1334_6.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00514.pdb # 2: usage_00515.pdb # 3: usage_00516.pdb # 4: usage_00517.pdb # 5: usage_00518.pdb # 6: usage_00872.pdb # 7: usage_00873.pdb # 8: usage_00876.pdb # 9: usage_00886.pdb # 10: usage_00887.pdb # 11: usage_00888.pdb # 12: usage_00889.pdb # 13: usage_00890.pdb # 14: usage_00891.pdb # 15: usage_00892.pdb # 16: usage_00893.pdb # # Length: 59 # Identity: 33/ 59 ( 55.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 59 ( 86.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 59 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00514.pdb 1 -KQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRK- 57 usage_00515.pdb 1 -KQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKS 58 usage_00516.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRK- 58 usage_00517.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKS 59 usage_00518.pdb 1 -KQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKS 58 usage_00872.pdb 1 --KWERFLVPYRQAVEELKVKLKGIRTLYE---DHSPIEFVTGRVKPVASILEKARRK- 53 usage_00873.pdb 1 -DKWERFLVPYRQAVEELKVKLKGIRTLYE--DDHSPIEFVTGRVKPVASILEKARRKS 56 usage_00876.pdb 1 ---WEEFLDPYIQAVGELKIKFRGIRKQFRKQKRHSPIEFVTGRVKPIESIKEKMVL-- 54 usage_00886.pdb 1 --QWERFLVPYRQAVEELKVKLKGIRTLYEY-EDHSPIEFVTGRVKPVASILEKARRKS 56 usage_00887.pdb 1 -KQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKS 58 usage_00888.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARR-- 57 usage_00889.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRK- 58 usage_00890.pdb 1 --QWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARR-- 55 usage_00891.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRK- 58 usage_00892.pdb 1 DKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARR-- 57 usage_00893.pdb 1 --QWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKS 57 WErFLvPYrQAVeELKvKlkGIRtlye dHSPIEFVTGRVKPvaSIlEKarr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################