################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:04 2021 # Report_file: c_0974_100.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00084.pdb # 2: usage_00338.pdb # 3: usage_00401.pdb # 4: usage_00402.pdb # 5: usage_00607.pdb # 6: usage_00608.pdb # 7: usage_00661.pdb # 8: usage_00673.pdb # 9: usage_00694.pdb # 10: usage_00695.pdb # 11: usage_00793.pdb # # Length: 58 # Identity: 24/ 58 ( 41.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 58 ( 46.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 58 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 EFMRFKVHMEGSVNGHEFEIEGEGEGRPYEAFQTAKLKVTK--GGPLPFAWDILSPQF 56 usage_00338.pdb 1 EFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTK--GGPLPFAWDILSPQF 56 usage_00401.pdb 1 EFMRFKVRMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTK--GGPLPFAWDILTPNF 56 usage_00402.pdb 1 -FMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTK--GGPLPFAWDILSPQF 55 usage_00607.pdb 1 --MKMKYFMDGSVNGHEFTVEGEGTGKPYEGKHKITLDVTK--GGPLPFAFDLLSTVF 54 usage_00608.pdb 1 --MKMRYYMDGSVNGHEFTVEGEGTGRPYEGKQKITLDVTK--GGPLPFAFDLLSTVF 54 usage_00661.pdb 1 EFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTK--GGPLPFAWDILSPQF 56 usage_00673.pdb 1 EFMRFKVRMEGTVNGHEFEIEGEGEGRPYEGHNTVKLKVTK--GGPLPFAWDILSPQF 56 usage_00694.pdb 1 --MKMTYHMDGCVNGHYFTVKGEGNGKPYEGTQTSTFKVTMANGGPLAFSFDILSTVF 56 usage_00695.pdb 1 DDMKMTYHMDGCVNGHYFTVKGEGNGKPYEGTQTSTFKVTMANGGPLAFSFDILSTVF 58 usage_00793.pdb 1 EFMRFKEHMEGSVNGHEFEIEGEGEGRPYEGTQTARLKVTK--GGPLPFAWDILSPQI 56 M M G VNGH F GEG G PYEg VT GGPL F D Ls f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################