################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:48 2021 # Report_file: c_1191_30.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00510.pdb # 2: usage_00807.pdb # 3: usage_00904.pdb # 4: usage_00905.pdb # 5: usage_01239.pdb # 6: usage_01251.pdb # 7: usage_01252.pdb # 8: usage_01253.pdb # 9: usage_01989.pdb # 10: usage_01990.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 56 ( 16.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 56 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00510.pdb 1 -VIHQSRPV-TVGKAGSRLAPG---GR-FDGALS-VHG------RRVVEASVTVDR 43 usage_00807.pdb 1 RTAFEVHH-----------------S-ALGGGGRYDGLSELLGGP-RVPGVGFAFG 37 usage_00904.pdb 1 RTVFEWVTN---------------QG-TVCAGGRYDGLVEQLGGR-ATPAVGFAMG 39 usage_00905.pdb 1 RTVFEWVTNQ---------------G-TVCAGGRYDGLVEQLGGR-ATPAVGFAMG 39 usage_01239.pdb 1 GIVFEAYDR-S-------G---QF-R-AILGGGRYDNLASL-SGE-SVPAVGFGGD 41 usage_01251.pdb 1 RTVFEWVTN-S-------L---GSQG-TVCAGGRYDGLVEQLGGR-ATPAVGFAMG 43 usage_01252.pdb 1 RTVFEWVTN-S-------L---GSQG-TVCAGGRYDGLVEQLGGR-ATPAVGFAMG 43 usage_01253.pdb 1 RTVFEWVTN-S-------L---GSQG-TVCAGGRYDGLVEQLGGR-ATPAVGFAMG 43 usage_01989.pdb 1 LTVFEWVTD-K--------------G-TVAAGGRYDPLIEQLGGK-PTAACGWAMG 39 usage_01990.pdb 1 LTVFEWVTD----------------G-TVAAGGRYDPLIEQLGGK-PTAACGWAMG 38 fe ggr d l a g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################