################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:50:14 2021 # Report_file: c_1302_7.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00093.pdb # 2: usage_00127.pdb # 3: usage_00383.pdb # 4: usage_00617.pdb # 5: usage_00618.pdb # 6: usage_01360.pdb # 7: usage_01361.pdb # 8: usage_01362.pdb # # Length: 59 # Identity: 3/ 59 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 59 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 59 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 --ASVRQDVLG-DL-SRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEF- 49 usage_00127.pdb 1 --------LEN-DI-IRLINRTVIHE---IYNETVKTGHVTHVKLSDDLLHVTVY---- 42 usage_00383.pdb 1 YGKAVRQDVLG-EVMQRHFIEAIVKEKINPAGAP--TFAPVEIGEG---KDLVFTATF- 52 usage_00617.pdb 1 ------QDVLG-DL-SRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEF- 45 usage_00618.pdb 1 ---SVRQDVLG-DL-SRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEFE 49 usage_01360.pdb 1 -----RQDVLG-DLMSRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEF- 47 usage_01361.pdb 1 -----RQDVLG-DLMSRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEF- 47 usage_01362.pdb 1 -----------DLM-SRNFIDAIIKEKINPAGAP--TYVPGEYKLG---EDFTYSVEF- 41 R fi aiikE pagap T p e klg d t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################