################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:07:48 2021 # Report_file: c_0601_5.html ################################################################################################ #==================================== # Aligned_structures: 44 # 1: usage_00002.pdb # 2: usage_00011.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00019.pdb # 8: usage_00022.pdb # 9: usage_00026.pdb # 10: usage_00027.pdb # 11: usage_00030.pdb # 12: usage_00031.pdb # 13: usage_00044.pdb # 14: usage_00053.pdb # 15: usage_00061.pdb # 16: usage_00064.pdb # 17: usage_00065.pdb # 18: usage_00076.pdb # 19: usage_00077.pdb # 20: usage_00078.pdb # 21: usage_00079.pdb # 22: usage_00080.pdb # 23: usage_00081.pdb # 24: usage_00082.pdb # 25: usage_00084.pdb # 26: usage_00086.pdb # 27: usage_00094.pdb # 28: usage_00095.pdb # 29: usage_00096.pdb # 30: usage_00097.pdb # 31: usage_00098.pdb # 32: usage_00099.pdb # 33: usage_00100.pdb # 34: usage_00101.pdb # 35: usage_00102.pdb # 36: usage_00103.pdb # 37: usage_00104.pdb # 38: usage_00105.pdb # 39: usage_00106.pdb # 40: usage_00107.pdb # 41: usage_00110.pdb # 42: usage_00116.pdb # 43: usage_00117.pdb # 44: usage_00118.pdb # # Length: 92 # Identity: 9/ 92 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 92 ( 16.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 92 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----GSALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 40 usage_00011.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00015.pdb 1 ----SKELLRLQKELKDIENENV-------------QEID-AHI-KD-SNFFEWVGFIKG 40 usage_00016.pdb 1 ---GSMALKRIQKELSDLQRDPP-------------AHCS-AGP-VG-DDLFHWQATIMG 41 usage_00017.pdb 1 SHMAGTALKRLMAEYKQLTLNPP-------------EGIV-AGP-MNEENFFEWEALIMG 45 usage_00018.pdb 1 ------ALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00019.pdb 1 --RGSMALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 42 usage_00022.pdb 1 ----MSSSKRIAKELSDLERDPP-------------TSCS-AGP-VG-DDLYHWQASIMG 40 usage_00026.pdb 1 ---GAMALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 41 usage_00027.pdb 1 ------ALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00030.pdb 1 -----REQARLLKELADIQQL---------------G-VS-AQI-VG-GDIHRWRGFIAG 36 usage_00031.pdb 1 ------EQARLLKELADIQQ----------------G-VS-AQI-VG-GDIHRWRGFIAG 34 usage_00044.pdb 1 ----MSSSKRIAKELSDLERDPP-------------TSCS-AGP-VG-DDLYHWQASIMG 40 usage_00053.pdb 1 ----PHIIRLVYKEVTTLTADPP-------------DGIK-VFP-NE-EDLTDLQVTIEG 40 usage_00061.pdb 1 ------ASKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00064.pdb 1 ------ALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00065.pdb 1 ------ALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00076.pdb 1 ----SMALKRIHKELNDLARDPP-------------AQSS-AGP-VG-DDMFHWQATIMG 40 usage_00077.pdb 1 ----SMALKRIHKELNDLARDPP-------------AQSS-AGP-VG-DDMFHWQATIMG 40 usage_00078.pdb 1 ----SMALKRIHKELNDLARDPP-------------AQSS-AGP-VG-DDMFHWQATIMG 40 usage_00079.pdb 1 ----SMALKRIHKELNDLARDPP-------------AQSS-AGP-VG-DDMFHWQATIMG 40 usage_00080.pdb 1 -------LKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 37 usage_00081.pdb 1 -------LKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 37 usage_00082.pdb 1 -----TSAKRIQKELAEITLDPP-------------PNCS-AGP-KG-DNIYEWRSTILG 39 usage_00084.pdb 1 -------LKRIHKELNDLARDPP-------------AQCR-AGP-VG-DDMFHWQATIMG 37 usage_00086.pdb 1 ----GMALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 40 usage_00094.pdb 1 --MADTCMSRIVKEYKVILKTL-ASDDPIANPYRGII-ES-LNPIDE-TDLSKWEAIISG 54 usage_00095.pdb 1 ------ALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 usage_00096.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00097.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00098.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00099.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00100.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00101.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00102.pdb 1 ---GAMALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 41 usage_00103.pdb 1 ----AMALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 40 usage_00104.pdb 1 -----MALKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00105.pdb 1 -GPLGSALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 43 usage_00106.pdb 1 SHMLEMALKRIQKELSDLQRDPP-------------AHCS-AGP-VG-DDLFHWQATIMG 44 usage_00107.pdb 1 -------LKRIHKELNDLARDPP-------------AQCR-AGP-VG-DDMFHWQATIMG 37 usage_00110.pdb 1 ----MAASRRLMKELEEIRKCGM-------------KNFRNIQV-DE-ANLLTWQGLIV- 40 usage_00116.pdb 1 -----MALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00117.pdb 1 -----MALKRINKELSDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 39 usage_00118.pdb 1 ------ASKRIHKELNDLARDPP-------------AQCS-AGP-VG-DDMFHWQATIMG 38 r kE w I usage_00002.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00011.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00015.pdb 41 PEGTPYEGGHFTLAITIPNDYPYNPPKIKFVT 72 usage_00016.pdb 42 PPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTT 73 usage_00017.pdb 46 PEDTCFEFGVFPAILSFPLDYPLSPPKMRFTC 77 usage_00018.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00019.pdb 43 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 74 usage_00022.pdb 41 PADSPYAGGVFFLSIHFPTDYPFKPPKISFTT 72 usage_00026.pdb 42 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 73 usage_00027.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00030.pdb 37 PLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVT 68 usage_00031.pdb 35 PLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVT 66 usage_00044.pdb 41 PADSPYAGGVFFLSIHFPTDYPFKPPKISFTT 72 usage_00053.pdb 41 PEGTPYAGGLFRMKLLLGKDFPASPPKGYF-- 70 usage_00061.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00064.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00065.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00076.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00077.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00078.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00079.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00080.pdb 38 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 69 usage_00081.pdb 38 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 69 usage_00082.pdb 40 PPGSVYEGGVFFLDITFSPDYPFKPPKVTFRT 71 usage_00084.pdb 38 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 69 usage_00086.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00094.pdb 55 PSDTPYENHQFRILIEVPSSYPMNPPKISF-- 84 usage_00095.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 usage_00096.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00097.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00098.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00099.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00100.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00101.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00102.pdb 42 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 73 usage_00103.pdb 41 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 72 usage_00104.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00105.pdb 44 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 75 usage_00106.pdb 45 PPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTT 76 usage_00107.pdb 38 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 69 usage_00110.pdb 41 PDNPPYDKGAFRIEINFPAEYPFKPPKITFKT 72 usage_00116.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00117.pdb 40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71 usage_00118.pdb 39 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 70 P y g F yP PPK F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################