################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:53 2021 # Report_file: c_0978_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00006.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00014.pdb # 11: usage_00015.pdb # 12: usage_00016.pdb # 13: usage_00017.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 68 ( 4.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 68 ( 48.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------PGLRELCIQKAP--GERLGISIRGG-AR----GHAGNPRDPTD-EGIFISKVSP 46 usage_00004.pdb 1 --------SGVVELPKTD---EGLGFNIMGG-K----EQ---------N-SPIYISRVIP 34 usage_00006.pdb 1 ---------RLCCLEKGP---NGYGFHLHGE------KG---------K-LGQYIRLVEP 32 usage_00008.pdb 1 -----GYKELDVHLRRME---SGFGFRILGG-DE----P---------G-QPILIGAVIA 37 usage_00009.pdb 1 -------TFLSTTLKKSN---MGFGFTIIGG-DE----P---------D-EFLQVKSVIP 35 usage_00010.pdb 1 -----SGEVRLVSLRR-AKAHEGLGFSIRGG-S----EH---------G-VGIYVSLVEP 39 usage_00011.pdb 1 ---------TLVRVKKSA--A-TLGIAIEGG-A----NT---------RQPLPRIVTIQR 34 usage_00012.pdb 1 ---------GNVVLPG-P--A-PWGFRLSGG-I----DF---------N-QPLVITRITP 32 usage_00013.pdb 1 AGQVVHTETTEVVLTADP--VTGFGIQLQGS-VFATETL---------S-SPPLISYIEA 47 usage_00014.pdb 1 ---------LMVEIVKTP--GSALGISLTTTSLR-------------NK-SVITIDRIKP 35 usage_00015.pdb 1 ---------GSVSLVG-P--A-PWGFRLQGG-K----DF---------N-MPLTISSLKD 32 usage_00016.pdb 1 -------LPRIVTLKKPP--GAQLGFNIRGG-KA----S---------Q-LGIFISKVIP 36 usage_00017.pdb 1 ---------RSVEVARGR---AGYGFTLSGQ-------------------APCVLSCVMR 29 G g usage_00001.pdb 47 TGAAGRDG 54 usage_00004.pdb 35 GGVADRHG 42 usage_00006.pdb 33 GSPAEKAG 40 usage_00008.pdb 38 MGSADRDG 45 usage_00009.pdb 36 DGPAAQDG 43 usage_00010.pdb 40 GSLAEKEG 47 usage_00011.pdb 35 GGSAHNCG 42 usage_00012.pdb 33 GSKAAAAN 40 usage_00013.pdb 48 DSPAERCG 55 usage_00014.pdb 36 ASVVDRSG 43 usage_00015.pdb 33 GGKASQAH 40 usage_00016.pdb 37 DSDAHRAG 44 usage_00017.pdb 30 GSPADFVG 37 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################