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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:03:09 2021
# Report_file: c_0019_13.html
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#====================================
# Aligned_structures: 4
#   1: usage_00015.pdb
#   2: usage_00016.pdb
#   3: usage_00040.pdb
#   4: usage_00055.pdb
#
# Length:        176
# Identity:       24/176 ( 13.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     85/176 ( 48.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           31/176 ( 17.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00015.pdb         1  GVNIIKPWVHNQDDCLA-VNSGENIWFTGGTCIGGHGLSIGSVGDRSNNVVKNVTIEHST   59
usage_00016.pdb         1  GVNIIKPWVHNQDDCLA-VNSGENIWFTGGTCIGGHGLSIGSVGDRSNNVVKNVTIEHST   59
usage_00040.pdb         1  -----DVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGA-D-TDVTDIVYRNVY   53
usage_00055.pdb         1  HVTLDNNHVYNQDDCVA-VTSGTNIVVSNMYCSGGHGLSIGSVGGKSDNVVDGVQFLSSQ   59
                                   V NqDdC a v sg NI      C gghGlsiGSvG  s nvV  v    s 

usage_00015.pdb        60  VSNSENAVRIKTISGA-TGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTI  118
usage_00016.pdb        60  VSNSENAVRIKTISGA-TGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTI  118
usage_00040.pdb        54  TWSSNQMYMIKSN--GGSGTVSNVLLENFIGHGNA-YSLDIDGYWSSMTAVAGD--GVQL  108
usage_00055.pdb        60  VVNSQNGCRIKSNSGA-TGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKI  118
                           v nS n  rIK    a tG vs  ty Ni   gis Ygv iqqdy  g ptgkp  GV i

usage_00015.pdb       119  QDVKLESVTGSVDS--GATEIYLLCGS--GSCSDWTWDDVKVTG------------  158
usage_00016.pdb       119  QDVKLESVTGSVDS--GATEIYLLCGS--GSCSDWTWDDVKVTG------------  158
usage_00040.pdb       109  NNITVKNWKGTEANGATRPPIRVVCSDTAP-CTDLTLEDIAIWTESGSSELYLCRS  163
usage_00055.pdb       119  SNIKFIKVTGTVAS--SAQDWFILCGD--GSCSGFTFSGNAITG-G--GKTSSCN-  166
                              k   vtG v s   a  i  lCg   g Csd T  d   tg            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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