################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:59 2021 # Report_file: c_0302_41.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00025.pdb # 2: usage_00067.pdb # 3: usage_00068.pdb # 4: usage_00132.pdb # 5: usage_00133.pdb # 6: usage_00160.pdb # 7: usage_00270.pdb # 8: usage_00385.pdb # 9: usage_00386.pdb # # Length: 124 # Identity: 30/124 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/124 ( 51.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/124 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 K------VTVFGTRPEAIK-APLVLELKKY-PEIDSYVTVTAQHR--QLDQVLDAFHIKP 50 usage_00067.pdb 1 -----KVLTVFGTRPEAIK-APLVHALAKD-PFFEAKVCVTAQHR--ELDQVLKLFSIVP 51 usage_00068.pdb 1 -----KVLTVFGTRPEAIK-APLVHALAKD-PFFEAKVCVTAQHR--ELDQVLKLFSIVP 51 usage_00132.pdb 1 -----KVLTVFGTRPEAIK-APLVHALAKD-PFFEAKVCVTAQHR--ELDQVLKLFSIVP 51 usage_00133.pdb 1 -----KVLTVFGTRPEAIK-APLVHALAKD-PFFEAKVCVTAQHR--ELDQVLKLFSIVP 51 usage_00160.pdb 1 -----KLSIILGTRPEIIKLSPIIRALEKT-N-IDWHIIHTNQHYSENDKIFFEELNLPN 53 usage_00270.pdb 1 -MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR-EMLDQVLEIFDIKP 58 usage_00385.pdb 1 -----KVMTVFGTRPEAIKMAPLVLELKKY-PEIDSYVTVTAQHR-QMLDQVLDAFHIKP 53 usage_00386.pdb 1 -----KVMTVFGTRPEAIKMAPLVLELKKY-PEIDSYVTVTAQHR-QMLDQVLDAFHIKP 53 fGTRPEaIK aPlv L K v TaQHr ldqvl f i p usage_00025.pdb 51 D-FDLNIK-ERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAV 108 usage_00067.pdb 52 D-YDLNI----QGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPV 106 usage_00068.pdb 52 D-YDLNI---GQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPV 107 usage_00132.pdb 52 D-YDLNI----QGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPV 106 usage_00133.pdb 52 D-YDLNI---GQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPV 107 usage_00160.pdb 54 PKYNLNIGS--GTHGEQTGK-LIEIEKVLLKEKPDVVVVQGDTNTVLAGALVASKLKIDV 110 usage_00270.pdb 59 D-IDLDIM---QTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKML 114 usage_00385.pdb 54 D-FDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAV 112 usage_00386.pdb 54 D-FDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAV 112 d dLnI q l EiT l kPD VlVhGDTtT A Laafy i v usage_00025.pdb 109 GHVE 112 usage_00067.pdb 107 GHVE 110 usage_00068.pdb 108 GHVE 111 usage_00132.pdb 107 GHVE 110 usage_00133.pdb 108 GHVE 111 usage_00160.pdb 111 AHVE 114 usage_00270.pdb 115 GHVE 118 usage_00385.pdb 113 GHVE 116 usage_00386.pdb 113 GHVE 116 gHVE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################