################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:11 2021 # Report_file: c_1484_358.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01223.pdb # 2: usage_02409.pdb # 3: usage_03174.pdb # 4: usage_03175.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 57 ( 19.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 57 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01223.pdb 1 -----NSTEVLYWKIISLDRDLDQYLNKSSKPPLKTLDAIRRELDIFQYKVDSL--- 49 usage_02409.pdb 1 ----DAHKRAVYLVQLAADGLFVHDYIHDDVL---SKSK-RQALETI----LEL--- 42 usage_03174.pdb 1 FGEYTASTRWPIIIQNAIDDLSKHQETEKS-N-GTKFEQGEVIKKELKEFRQEIIDR 55 usage_03175.pdb 1 FGEYTASTRWPIIIQNAIDDLSKHQETEKS-N-GTKFEQGEVIKKELKEFRQEIIDR 55 astr q a D l h s e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################