################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:24 2021 # Report_file: c_0674_26.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00050.pdb # 2: usage_00104.pdb # 3: usage_00153.pdb # 4: usage_00156.pdb # # Length: 64 # Identity: 6/ 64 ( 9.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 64 ( 40.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 64 ( 29.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 -IFFFKDRFIWRTVTPRDK-PMGPLL--VATFWPELPEKIDAVYEAPQEEKAVFFAGNEY 56 usage_00104.pdb 1 -MFVFKERWFWRVRNN-QVMDGYPMP--IGQFWRGLPASINTAYER-KDGKFVFFKGDKH 55 usage_00153.pdb 1 -MFVFKERWFWRVRNN-QVMDGYPMP--IGQFWRGLPASINTAYER-KDGKFVFFKGDKH 55 usage_00156.pdb 1 TMLFFKDEFVWKS-------------HRISERWKNFIGPVDAAFRH---TSVYLIKGDKV 44 mf FK r Wr i fW lp i aye k vffkGdk usage_00050.pdb 57 WIYS 60 usage_00104.pdb 56 WVFD 59 usage_00153.pdb 56 WVFD 59 usage_00156.pdb 45 WVYT 48 Wv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################