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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:12:47 2021
# Report_file: c_1115_109.html
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#====================================
# Aligned_structures: 9
#   1: usage_00866.pdb
#   2: usage_00954.pdb
#   3: usage_00955.pdb
#   4: usage_00956.pdb
#   5: usage_00957.pdb
#   6: usage_00958.pdb
#   7: usage_00959.pdb
#   8: usage_00960.pdb
#   9: usage_00961.pdb
#
# Length:         73
# Identity:       40/ 73 ( 54.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     42/ 73 ( 57.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 73 ( 15.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00866.pdb         1  ---PMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEINAID-GH   56
usage_00954.pdb         1  TL-SMEKRVMARMFSAFDVTQLGYLEERKIEHMCKYLGRVMNEDDVKQMKSEIN-AIDGH   58
usage_00955.pdb         1  TL-SMEKRVMARMFSAFDVTQLGYLEERKIEHMCKYLGRVMNEDDVKQMKSEIN-AIDGH   58
usage_00956.pdb         1  --TLSEKRV-AR-FSAFDVTQLGYLEERKIEH-CKYLGRV-NEDDVKQ-KSEIN-AIDGH   52
usage_00957.pdb         1  ---LSEKRV-AR-FSAFDVTQLGYLEERKIEH-CKYLGRV-NEDDVKQ-KSEIN-AIDGH   51
usage_00958.pdb         1  TQ-PMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEIN-AIDGH   58
usage_00959.pdb         1  TQ-PMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEIN-AIDGH   58
usage_00960.pdb         1  TQ-PMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEIN-AIDGH   58
usage_00961.pdb         1  -Q-PMIKKIMSRLFSAFDVTHLGYLTPDKVEEVCRYLGRNMSDGDVKAMKAEIN-AIDGH   57
                                 K    R FSAFDVT LGYL   K E  C YLGR     DVK  K EIN ai GH

usage_00866.pdb        57  VTFEKFWAWWCSH   69
usage_00954.pdb        59  ITFEKFWAWWCSH   71
usage_00955.pdb        59  ITFEKFWAWWCSH   71
usage_00956.pdb        53  ITFEKFWAWWCSH   65
usage_00957.pdb        52  ITFEKFWAWWCS-   63
usage_00958.pdb        59  VTFEKFWAWWCSH   71
usage_00959.pdb        59  VTFEKFWAWWCSH   71
usage_00960.pdb        59  VTFEKFWAWWCSH   71
usage_00961.pdb        58  VTFEKFWAWWCSH   70
                            TFEKFWAWWCS 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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