################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:34 2021 # Report_file: c_1479_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00174.pdb # 2: usage_00264.pdb # 3: usage_00265.pdb # 4: usage_00417.pdb # 5: usage_00419.pdb # # Length: 70 # Identity: 22/ 70 ( 31.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 70 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 70 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 -LLELVKQFNLYVDELAITCEANNVWAK-------TPNLFALYD-NSGGEAIHGHAFVPY 51 usage_00264.pdb 1 NLLELVKQFNLYVDELAITCEANNVWAKERI-DST-PNLFALYD-NSGGEAIHGHAFVPY 57 usage_00265.pdb 1 -LLELVKQFNLYVDELAITCEANNVWAKERI-DST-PNLFALYD-NSGGEAIHGHAFVPY 56 usage_00417.pdb 1 -FGQLAKCFNDYLNTVAEHCEQQNIWQ---HKREENHNFFTAFKPDASKAALHGHAYIAH 56 usage_00419.pdb 1 NLLELVKQFNLYVDELAITCEANNVW------------LFALYD-NSGGEAIHGHAFVPY 47 lleLvKqFNlYvdelAitCEanNvW lFalyd nsggeAiHGHAfvpy usage_00174.pdb 52 YKESIVLRRL 61 usage_00264.pdb 58 YKESIVLRR- 66 usage_00265.pdb 57 YKESIVLRRL 66 usage_00417.pdb 57 YKESVILRHL 66 usage_00419.pdb 48 YKESIVLRRL 57 YKESivLRr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################