################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:47 2021 # Report_file: c_1493_144.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00611.pdb # 2: usage_00649.pdb # 3: usage_00650.pdb # 4: usage_00651.pdb # 5: usage_00652.pdb # 6: usage_00653.pdb # 7: usage_00654.pdb # 8: usage_00655.pdb # 9: usage_01591.pdb # 10: usage_01592.pdb # 11: usage_01593.pdb # 12: usage_01594.pdb # # Length: 26 # Identity: 3/ 26 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 26 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 26 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00611.pdb 1 -----TRELFYKLFKEDILSAIKEG- 20 usage_00649.pdb 1 -LSDSLFTVSYRLNEEELFKK----- 20 usage_00650.pdb 1 -LSDSLFTVSYRLNEEELFKKL---- 21 usage_00651.pdb 1 -LSDSLFTVSYRLNEEELFKKL---- 21 usage_00652.pdb 1 HLSDSLFTVSYRLNEEELFKKLKGET 26 usage_00653.pdb 1 -LSDSLFTVSYRLNEEELFKKLKGET 25 usage_00654.pdb 1 HLSDSLFTVSYRLNEEELFKKLKGET 26 usage_00655.pdb 1 HLSDSLFTVSYRLNEEELFKKLKGET 26 usage_01591.pdb 1 -LSDSLFTVSYRLNEEELFKKL---- 21 usage_01592.pdb 1 -LSDSLFTVSYRLNEEELFKK----- 20 usage_01593.pdb 1 -LSDSLFTVSYRLNEEELFKKLK--- 22 usage_01594.pdb 1 -LSDSLFTVSYRLNEEELFKKL---- 21 lftvsYrLneEelfkk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################