################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:14 2021 # Report_file: c_0070_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00007.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00142.pdb # 6: usage_00143.pdb # 7: usage_00144.pdb # 8: usage_00145.pdb # # Length: 258 # Identity: 61/258 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 223/258 ( 86.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/258 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -KLIIITGAGGVLCSFLAKQLAYTKANIALLDLNFEAADKVAKEINQSGGKAKAYKTNVL 59 usage_00139.pdb 1 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 60 usage_00140.pdb 1 -KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 59 usage_00141.pdb 1 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 60 usage_00142.pdb 1 -KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 59 usage_00143.pdb 1 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 60 usage_00144.pdb 1 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 60 usage_00145.pdb 1 -KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT 59 KvclvTGAGGniglatAlrLAeegtaIALLDmNrEAleKaeasvrekGveArsYvcdVt usage_00007.pdb 60 ELENIKEVRNQIETDFGTCDILINGAGGNNPKATTDNEFHQFDLNETT--RTFFDLDKSG 117 usage_00139.pdb 61 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 102 usage_00140.pdb 60 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 101 usage_00141.pdb 61 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 102 usage_00142.pdb 60 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 101 usage_00143.pdb 61 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 102 usage_00144.pdb 61 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 102 usage_00145.pdb 60 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-G-----------------AFAPVQDYPSDD 101 seEavigtvdsvvrDFGkiDfLfNnAGyq g apvqDypsdd usage_00007.pdb 118 IEFVFNLNYLGSLLPTQVFAKDL-GKQGANIINISS-NAFTPLTKIPAYSGAKAAISNFT 175 usage_00139.pdb 103 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 162 usage_00140.pdb 102 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 161 usage_00141.pdb 103 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 162 usage_00142.pdb 102 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 161 usage_00143.pdb 103 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 162 usage_00144.pdb 103 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 162 usage_00145.pdb 102 FARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALT 161 farVltiNvtGafhvlkavsrqm tqnygrIvNtaS agvkgppnmaAYgtsKgAIialT usage_00007.pdb 176 QWLAVYFSKVGIRCNAIAPGFLVSNQNLALLF-D--TEGKP-------TDRANKILTNTP 225 usage_00139.pdb 163 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 221 usage_00140.pdb 162 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 220 usage_00141.pdb 163 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 221 usage_00142.pdb 162 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 220 usage_00143.pdb 163 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 221 usage_00144.pdb 163 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 221 usage_00145.pdb 162 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS-QYFSTDPKVVAQQMIGSVP 220 etaAldlapynIRvNAIsPGymgpgfmwerqv l kvGs kvvAqqmigsvP usage_00007.pdb 226 -GRFGESEELLGALLFLI 242 usage_00139.pdb 222 MRRYGDINEIPGVVAFLL 239 usage_00140.pdb 221 MRRYGDINEIPGVVAFLL 238 usage_00141.pdb 222 MRRYGDINEIPGVVAFLL 239 usage_00142.pdb 221 MRRYGDINEIPGVVAFLL 238 usage_00143.pdb 222 MRRYGDINEIPGVVAFLL 239 usage_00144.pdb 222 MRRYGDINEIPGVVAFLL 239 usage_00145.pdb 221 MRRYGDINEIPGVVAFLL 238 rRyGdinEipGvvaFLl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################