################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:04:35 2021 # Report_file: c_0693_57.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00054.pdb # 2: usage_00070.pdb # 3: usage_00100.pdb # 4: usage_00101.pdb # 5: usage_00112.pdb # 6: usage_00121.pdb # 7: usage_00139.pdb # 8: usage_00144.pdb # 9: usage_00160.pdb # 10: usage_00202.pdb # 11: usage_00253.pdb # 12: usage_00264.pdb # 13: usage_00278.pdb # 14: usage_00346.pdb # 15: usage_00442.pdb # 16: usage_00476.pdb # 17: usage_00492.pdb # 18: usage_00537.pdb # 19: usage_00548.pdb # 20: usage_00598.pdb # 21: usage_00727.pdb # 22: usage_00768.pdb # 23: usage_00791.pdb # 24: usage_00804.pdb # # Length: 75 # Identity: 1/ 75 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 75 ( 18.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 75 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 -VTPPKVSLFE-PSKAE-IANKQKATLVCLARG----FFP--DHVELSWWVN----GKEV 47 usage_00070.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00100.pdb 1 -TTPPSVYPLA-PGS-AQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 43 usage_00101.pdb 1 -TTPPSVYPLA-P-------SMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 37 usage_00112.pdb 1 -TTPPSVYPLA-PAA-AAANSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 43 usage_00121.pdb 1 ---CAISYGYSSG---------V--PNLCSLRTSITNTGLTPTTYSLRVG--GLES-G-- 41 usage_00139.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00144.pdb 1 KTTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 45 usage_00160.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00202.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00253.pdb 1 -TTPPSVFPLA-PGS----NSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 40 usage_00264.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00278.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00346.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00442.pdb 1 -TTPPSVYPLA-PG-----NSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 39 usage_00476.pdb 1 -TTPPSVYPLA-P-----TNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 39 usage_00492.pdb 1 KTTPPSVYPLA-PGS---AASMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 42 usage_00537.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00548.pdb 1 -TTPPSVYPLA-P-------SMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 37 usage_00598.pdb 1 -----SVYPLA-P--------MV--TLGCLVKG----YFP--EPVTVTWN------SGSL 32 usage_00727.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00768.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 usage_00791.pdb 1 ----PSVYPLA-PGP---TNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 38 usage_00804.pdb 1 -TTPPSVYPLA-PGSAAQTNSMV--TLGCLVKG----YFP--EPVTVTWN------SGSL 44 v p v tl Cl g fp v w g usage_00054.pdb 48 HSGVST--D------ 54 usage_00070.pdb 45 SSGVHT--FPAVLQS 57 usage_00100.pdb 44 SSGVHT--F------ 50 usage_00101.pdb 38 SSGVHT--F------ 44 usage_00112.pdb 44 SGGVHT--F------ 50 usage_00121.pdb 42 ----VVWV------- 45 usage_00139.pdb 45 SSGVHT--------- 50 usage_00144.pdb 46 SSGVHT--FP----- 53 usage_00160.pdb 45 SSGVHT--F------ 51 usage_00202.pdb 45 SSGVHT--F------ 51 usage_00253.pdb 41 SSGVHT--F------ 47 usage_00264.pdb 45 SSGVHT--FPAVLQS 57 usage_00278.pdb 45 SSGVHT--F------ 51 usage_00346.pdb 45 SSGVHT--F------ 51 usage_00442.pdb 40 SSGVHT--F------ 46 usage_00476.pdb 40 SSGVHT--F------ 46 usage_00492.pdb 43 SSGVHT--F------ 49 usage_00537.pdb 45 SSGVHT--FPAVLES 57 usage_00548.pdb 38 SSGVHT--F------ 44 usage_00598.pdb 33 SSGVHT--F------ 39 usage_00727.pdb 45 SSGVHT--F------ 51 usage_00768.pdb 45 SSGVHT--F------ 51 usage_00791.pdb 39 SSGVHT--F------ 45 usage_00804.pdb 45 SSGVHT--F------ 51 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################