################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:54 2021 # Report_file: c_1199_193.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00090.pdb # 2: usage_00331.pdb # 3: usage_00333.pdb # 4: usage_00516.pdb # 5: usage_00555.pdb # 6: usage_01518.pdb # 7: usage_01519.pdb # 8: usage_01550.pdb # 9: usage_01551.pdb # 10: usage_01552.pdb # 11: usage_01602.pdb # 12: usage_01603.pdb # 13: usage_01604.pdb # 14: usage_01605.pdb # 15: usage_01606.pdb # 16: usage_01607.pdb # 17: usage_01753.pdb # 18: usage_02196.pdb # # Length: 41 # Identity: 5/ 41 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 41 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 41 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGEKP-LVLS---- 34 usage_00331.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGESE-KPLVLST- 37 usage_00333.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGESE-KPLVL--- 35 usage_00516.pdb 1 IEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMT-VWLS---- 36 usage_00555.pdb 1 ---NFKLTAKRQDMINGIVTWFDIVFPAPKGK-RPVEFSTG 37 usage_01518.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGESE-KPLVL--- 35 usage_01519.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGPLV-LS------ 32 usage_01550.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGESE-KPLVL--- 35 usage_01551.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGESE-KPLVL--- 35 usage_01552.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGEKP-LVLS---- 34 usage_01602.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGGDSE-KPLVL--- 35 usage_01603.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGGKPL-VLST---- 34 usage_01604.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGEKPL-VLST---- 34 usage_01605.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGK-P-LVLS----- 32 usage_01606.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGGKPL-VLST---- 34 usage_01607.pdb 1 --GRFRCSCYGSAPLHGFAVWFQVTFPGGKPL-VLS----- 33 usage_01753.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGEKP-LVLS---- 34 usage_02196.pdb 1 --GRFRCSCYGSAPMHGFAIWFQVTFPGGEKPLVLST---- 35 F s hG a WF v Fpg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################