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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:04:54 2021
# Report_file: c_0314_60.html
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#====================================
# Aligned_structures: 4
#   1: usage_00008.pdb
#   2: usage_00253.pdb
#   3: usage_00486.pdb
#   4: usage_00487.pdb
#
# Length:        120
# Identity:       15/120 ( 12.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     39/120 ( 32.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/120 ( 20.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  NTDYIAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL   59
usage_00253.pdb         1  --TDIGSISAIEDGL-----T-VVVIGAGGAGKALAYGAKEK-A-KVVIANRTYERALEL   50
usage_00486.pdb         1  -TDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI   59
usage_00487.pdb         1  -TDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI   59
                             dyIg  k   k          vV GsGGaa Av    K   a       Rn e   e 

usage_00008.pdb        60  AALYGYAYINS--LENQ---Q--ADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDV  112
usage_00253.pdb        51  AEAIGGKALSLTDL---DNYEDGM-VLANTTSMGM--QPNVEETPISKDALKHYALVFDA  104
usage_00486.pdb        60  YG--EFKVISYDELSNL---K--GDVIINCTPKGM--YPKEGESPVDKEVVAKFSSAVDL  110
usage_00487.pdb        60  YG--EFKVISYDELSNL---K--GDVIINCTPKGM--YPKEGESPVDKEVVAKFSSAVDL  110
                                 k is   L           v  N T  GM   p e e p  K      s a D 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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