################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:14 2021 # Report_file: c_1058_18.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00016.pdb # 2: usage_00021.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00114.pdb # 6: usage_00115.pdb # 7: usage_00131.pdb # 8: usage_00208.pdb # 9: usage_00220.pdb # 10: usage_00222.pdb # 11: usage_00246.pdb # 12: usage_00247.pdb # 13: usage_00287.pdb # 14: usage_00288.pdb # # Length: 45 # Identity: 6/ 45 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 45 ( 42.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 45 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00021.pdb 1 -RKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDG- 43 usage_00053.pdb 1 PRKGVIELMRMLD---NPLRVQIGSNNIRAHVGDFIFTSKLVDG- 41 usage_00054.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00114.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR 45 usage_00115.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDG- 44 usage_00131.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00208.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00220.pdb 1 -RKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 39 usage_00222.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00246.pdb 1 PRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSK----- 40 usage_00247.pdb 1 PARSVDELIRVLK--DGEARFTYGDGMLTVTTDRVKMNLKLLDG- 42 usage_00287.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 usage_00288.pdb 1 PRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSK----- 40 rkgv EL R L r G ira g f ftsK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################