################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:11 2021 # Report_file: c_1417_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00236.pdb # 2: usage_00237.pdb # 3: usage_00292.pdb # 4: usage_00293.pdb # 5: usage_00294.pdb # 6: usage_00735.pdb # 7: usage_01043.pdb # 8: usage_01078.pdb # 9: usage_01079.pdb # 10: usage_01507.pdb # 11: usage_01508.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 71 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 71 ( 49.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 --CEVCEKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_00237.pdb 1 --CEVCEKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_00292.pdb 1 -FCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 52 usage_00293.pdb 1 ---EVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 50 usage_00294.pdb 1 --CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_00735.pdb 1 LSCQMCELVVKKYEGSA-D-K---DANVIKKDFDAECKKLFHTIPFGTRE-CDHYVNSK- 53 usage_01043.pdb 1 -QDYQISIGSLKLQFESSDY-TDEIRAWLPGNGRGKY-------------FTTDIEKNRF 45 usage_01078.pdb 1 --CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_01079.pdb 1 --CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_01507.pdb 1 --CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 usage_01508.pdb 1 --CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-----D-PYQKQ-CDQFVAEYE 51 c v l g cd v usage_00236.pdb ----------- usage_00237.pdb ----------- usage_00292.pdb ----------- usage_00293.pdb ----------- usage_00294.pdb ----------- usage_00735.pdb ----------- usage_01043.pdb 46 DDFINKYKSHK 56 usage_01078.pdb ----------- usage_01079.pdb ----------- usage_01507.pdb ----------- usage_01508.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################