################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:42 2021 # Report_file: c_1383_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00125.pdb # 2: usage_00126.pdb # 3: usage_00127.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00379.pdb # 8: usage_00586.pdb # 9: usage_00876.pdb # 10: usage_01071.pdb # 11: usage_01072.pdb # 12: usage_01130.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 61 ( 62.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 -----KSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMN---------- 43 usage_00126.pdb 1 ------SQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNIN-------- 44 usage_00127.pdb 1 --AQLKSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNIN-------- 48 usage_00128.pdb 1 ------SQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNIN-------- 44 usage_00129.pdb 1 ----LKSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEM----------- 43 usage_00130.pdb 1 DTAQLKSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNINE------- 51 usage_00379.pdb 1 ---NMGSLFQQVAQK-TGVSNTLENEFKGRASELQ------RMETDLQAKMKKLQ----- 45 usage_00586.pdb 1 ------SQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNIN-------- 44 usage_00876.pdb 1 ---------------EREHLPQVIRQYGIASGHIW----------NQMKMTL---PSNFT 32 usage_01071.pdb 1 DTAQLKSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNI--------- 49 usage_01072.pdb 1 DTAQLKSQIQQYLVE-SGNYELISNELKARLLQEGWVDKVKDLT-KSEMNIN-------- 50 usage_01130.pdb 1 --AQMRAAINQKLIE-TGERERLKELLRAKLIECGWKDQLKAHC-KEVIKE--------- 47 g usage_00125.pdb - usage_00126.pdb - usage_00127.pdb - usage_00128.pdb - usage_00129.pdb - usage_00130.pdb - usage_00379.pdb - usage_00586.pdb - usage_00876.pdb 33 E 33 usage_01071.pdb - usage_01072.pdb - usage_01130.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################