################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:38:36 2021 # Report_file: c_0148_12.html ################################################################################################ #==================================== # Aligned_structures: 54 # 1: usage_00014.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00050.pdb # 8: usage_00058.pdb # 9: usage_00059.pdb # 10: usage_00062.pdb # 11: usage_00063.pdb # 12: usage_00071.pdb # 13: usage_00087.pdb # 14: usage_00100.pdb # 15: usage_00102.pdb # 16: usage_00107.pdb # 17: usage_00111.pdb # 18: usage_00113.pdb # 19: usage_00119.pdb # 20: usage_00132.pdb # 21: usage_00146.pdb # 22: usage_00147.pdb # 23: usage_00150.pdb # 24: usage_00167.pdb # 25: usage_00168.pdb # 26: usage_00171.pdb # 27: usage_00178.pdb # 28: usage_00182.pdb # 29: usage_00208.pdb # 30: usage_00209.pdb # 31: usage_00210.pdb # 32: usage_00211.pdb # 33: usage_00212.pdb # 34: usage_00213.pdb # 35: usage_00214.pdb # 36: usage_00215.pdb # 37: usage_00220.pdb # 38: usage_00224.pdb # 39: usage_00247.pdb # 40: usage_00248.pdb # 41: usage_00249.pdb # 42: usage_00268.pdb # 43: usage_00279.pdb # 44: usage_00294.pdb # 45: usage_00295.pdb # 46: usage_00299.pdb # 47: usage_00300.pdb # 48: usage_00301.pdb # 49: usage_00306.pdb # 50: usage_00324.pdb # 51: usage_00328.pdb # 52: usage_00329.pdb # 53: usage_00330.pdb # 54: usage_00331.pdb # # Length: 114 # Identity: 18/114 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/114 ( 22.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/114 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 DIQMTQSPSSLSASVGDRVTITCQASQDI--S-----SYLNWYQQKPGKAPKLLIHAASS 53 usage_00019.pdb 1 -IKMTQSPSSMYTSLGERVTITCKASQDI--N-----SFLTWFLQKPGKSPKTLIYRANR 52 usage_00020.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI--S-----SYLNWYQQKPGKAPKLLIYAASS 52 usage_00031.pdb 1 --QMTQSPSSLSASVGDRVTITCRTSQSI--S-----SYLNWYQQKPGKAPKLLIYAASS 51 usage_00032.pdb 1 --QMTQSPSSLSASVGDRVTITCRTSQSI--S-----SYLNWYQQKPGKAPKLLIYAASS 51 usage_00033.pdb 1 --QMTQSPSSLSASVGDRVTITCRTSQSI--S-----SYLNWYQQKPGKAPKLLIYAASS 51 usage_00050.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI--S-----DYLIWYQQKLGKAPNLLIYDAST 52 usage_00058.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDI--S-----NFLIWYQQKPGKAPKLLIYDASN 51 usage_00059.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDI--S-----NFLIWYQQKPGKAPKLLIYDASN 51 usage_00062.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI--G-----SYLNWYQQKTGKAPKALIYAASS 52 usage_00063.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI--G-----SYLNWYQQKTGKAPKALIYAASS 52 usage_00071.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSI--S-----SYLNWYQQKPGKAPKLLIYDADD 53 usage_00087.pdb 1 DIQMTQSPSSLSASVGDRVTITCRSSQSL--VHNNANTYLHWYQQKPGKAPKLLIYKVSN 58 usage_00100.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI--I-----KYLAWYQQKPGKAPKLLIYEASN 52 usage_00102.pdb 1 -IQMTQSPSTLSASVGDRVTITCKASENV--D-----TYVSWYQQKPGKAPKLLIYGASN 52 usage_00107.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQGI--R-----NDLGWYQQKPGKAPKRLIYAASS 53 usage_00111.pdb 1 -IKMTQSPSSMYTSLGERVTITCKASQDI--N-----SFLTWFLQKPGKSPKTLIYRANR 52 usage_00113.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASEDV--N-----TYVSWYQQKPGKAPKLLIYAASN 52 usage_00119.pdb 1 DIQMTQSPSSLSASLGDRVTITCQASRGI--G-----KDLNWYQQKAGKAPKLLVSDAST 53 usage_00132.pdb 1 DIQMTQSPSSLSASVGDRVTITCKASQDI--K-----SFLSWYQQKPEKAPKSLIYYATS 53 usage_00146.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI--A-----SDLNWYQQKPGKAPKLLIYSDSY 52 usage_00147.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDI--A-----AALNWYQQKPGKAPKLLIYASSY 51 usage_00150.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQGI--R-----SALNWYQQKPGKAPKLLIYNGST 52 usage_00167.pdb 1 --QMTQSPSTLSASVGDRVTITCRASQSI--S-----SWLAWYQQKPGKAPKLLIYKAST 51 usage_00168.pdb 1 -IQMTQSPSTLSASVGDRVTITCRASQSI--S-----SWLAWYQQKPGKAPKLLIYKAST 52 usage_00171.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI--A-----SYLAWYQQKPGKAPKLLIYDASN 52 usage_00178.pdb 1 --QMTQSPSTLSASVGDRVTITCRASQSI--S-----SWLAWYQQKPGKAPKLLIYKAST 51 usage_00182.pdb 1 -IQMTQSPSSLSAS--GKVTITCKASQDI--N-----KYIAWYQHKPGKGPRLLIHYTST 50 usage_00208.pdb 1 DIQMTQSPSFVSASVGDRVTITCRASQGI--S-----SYLAWYQQKPGKAPKLVIYAAST 53 usage_00209.pdb 1 DIQMTQSPSFVSASVGDRVTITCRASQGI--S-----SYLAWYQQKPGKAPKLVIYAAST 53 usage_00210.pdb 1 -IQMTQSPSFVSASVGDRVTITCRASQGI--------SYLAWYQQKPGKAPKLVIYAAST 51 usage_00211.pdb 1 DIQMTQSPSFVSASVGDRVTITCRASQGI--S-----SYLAWYQQKPGKAPKLVIYAAST 53 usage_00212.pdb 1 DIQMTQSPSFVSASVGDRVTITCRASQGI--S-----SYLAWYQQKPGKAPKLVIYAAST 53 usage_00213.pdb 1 -IQMTQSPASLSVSVGDTITLTCHASQNI--D-----VWLSWFQQKPGNIPKLLIYKASN 52 usage_00214.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI--S-----NYLIWYQQKPGKAPKLLIYDASN 52 usage_00215.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI--S-----NYLNWYQQKPGKAPKLLIYDASN 52 usage_00220.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQWI--G-----PELKWYQQKPGKAPKLLIYHGSI 52 usage_00224.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI--G-----ISLSWYQQKPGKAPKLLIYNANN 52 usage_00247.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI--G-----LYLAWYQQKPGKAPKLLIYAASS 52 usage_00248.pdb 1 --LMTQTPTIMSASIGEEITLTCSASSSV--S-----H-MHWYQHKSGTSPKLLIYITSY 50 usage_00249.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI--T-----NHLNWYQQKPGKAPKLLIYDASN 52 usage_00268.pdb 1 -LDMTQTPSSVSAPVGGSVTINCQSSQSVYGN-----NYLAWYQQKAGQPPKLLIYRAST 54 usage_00279.pdb 1 -IQMTQSPVSLSASVGDRVTITCRASQSI--G-----KFLNWYQQKPGRAPKLLIYYASN 52 usage_00294.pdb 1 DIRLTQSPSSLSASVGDRVTITCRASQSI--S-----NYLNWYQKKPGQAPKLLIYAATS 53 usage_00295.pdb 1 -IRLTQSPSSLSASVGDRVTITCRASQSI--S-----NYLNWYQKKPGQAPKLLIYAATS 52 usage_00299.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASRDI--K-----SYLNWYQQKPGKAPKVLIYYATS 52 usage_00300.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASRDI--K-----SYLNWYQQKPGKAPKVLIYYATS 52 usage_00301.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI--R-----NDLGWYQQKPGKAPKKLIYAASS 52 usage_00306.pdb 1 -TTVTQSPSFLSASVGDRVTITCITTTDI--D-----DDMNWFQQEPGKAPKLLISEGNI 52 usage_00324.pdb 1 DIQMTQSPSFVSASVGDRVTITCRASQGI--S-----SYLAWYQQKPGKAPKLVIYAAST 53 usage_00328.pdb 1 --QMTQSPSSLPASLGDRVTINCQASQDI--S-----NYLNWYQQKPGKAPKLLIYYTNK 51 usage_00329.pdb 1 --QMTQSPSSLPASLGDRVTINCQASQDI--S-----NYLNWYQQKPGKAPKLLIYYTNK 51 usage_00330.pdb 1 --QMTQSPSSLPASLGDRVTINCQASQDI--S-----NYLNWYQQKPGKAPKLLIYYTNK 51 usage_00331.pdb 1 --QMTQSPSSLPASLGDRVTINCQASQDI--S-----NYLNWYQQKPGKAPKLLIYYTNK 51 TQ P s T C s W k g P i usage_00014.pdb 54 LETGVPSRFSGSGSGTDFSFTISSLQPEDLATYYCQQYDSLPLTFGGGTKVEI- 106 usage_00019.pdb 53 LMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDL- 105 usage_00020.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPNTFGQGTKVEI- 105 usage_00031.pdb 52 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSAPRTFGQGTKVEI- 104 usage_00032.pdb 52 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSAPRTFGQGTKVEI- 104 usage_00033.pdb 52 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSAPRTFGQGTKVEI- 104 usage_00050.pdb 53 LETGVPSRFSGSGSGTEYTFTISSLQPEDIATYYCQQYDDLPYTFGQGTKVEI- 105 usage_00058.pdb 52 LETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYHNLPPFTFGPGTKLEI 105 usage_00059.pdb 52 LETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYHNLPPFTFGPGTKLEI 105 usage_00062.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQLEDFATYYCQQSYSTPSFGQGTKVEI-- 104 usage_00063.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQLEDFATYYCQQSYSTPSFGQGTKVEI-- 104 usage_00071.pdb 54 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPNTFGQGTKVEI- 106 usage_00087.pdb 59 RFSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCSQNTLVPWTFGQGTKVEI- 111 usage_00100.pdb 53 LQAGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYQSLPYTFGQGTKLEI- 105 usage_00102.pdb 53 RYTGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCGQSYNYPFTFGQGTKVEV- 105 usage_00107.pdb 54 LESGVPSRFSGSGSGTEFTLTISSVQPEDFVTYYCLQHNSNPLTFGGGTKVEI- 106 usage_00111.pdb 53 LMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDL- 105 usage_00113.pdb 53 RYTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSFSYPTFGQGTKLEI-- 104 usage_00119.pdb 54 LEGGVPSRFSGSGFHQDFSLTISSLQAEDVATYFCQQY----ETFGQGTKVDI- 102 usage_00132.pdb 54 LADGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCLQHGESPYTFGGGTKVEI- 106 usage_00146.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYMIPSTFGQGTKVEI- 105 usage_00147.pdb 52 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQDGYYPATFGQGTKVEI- 104 usage_00150.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYYCQQFDGDPTFGQGTKVEI-- 104 usage_00167.pdb 52 LESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNTYWTFGQGTKVEI-- 103 usage_00168.pdb 53 LESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNTYWTFGQGTKVEI-- 104 usage_00171.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAYKTPYTFGQGTKVEI- 105 usage_00178.pdb 52 LESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNTYWTFGQGTKVEI-- 103 usage_00182.pdb 51 LHPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLRTFGGGTKLEI-- 102 usage_00208.pdb 54 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 105 usage_00209.pdb 54 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 105 usage_00210.pdb 52 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 103 usage_00211.pdb 54 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 105 usage_00212.pdb 54 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 105 usage_00213.pdb 53 LHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQAHSYPFTFGGGTKLEI- 105 usage_00214.pdb 53 LETGVPSRFSGSGSGTDFTFTISSLQPEDIATYHCQQYDNLPYTFGQGTKLEI- 105 usage_00215.pdb 53 LETGVPSRFSGSGSGTDFTFTISSLQPEDIATYHCQQYDNLPYTFGQGTKLEI- 105 usage_00220.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYMYYPHTFGQGTKVEI- 105 usage_00224.pdb 53 LADGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQHNSAPYTFGQGTKLEI- 105 usage_00247.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNTLSYTFGQGTKVEI- 105 usage_00248.pdb 51 LASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSTFPSTFGSGTKLEI- 103 usage_00249.pdb 53 LETGVPSRFSGRGSGTHFTFTISSLQPADIATYYCQEYDYLPQTFGGGTKVEI- 105 usage_00268.pdb 55 LASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEI 108 usage_00279.pdb 53 LETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEI- 105 usage_00294.pdb 54 LQSGVPSRFSGSGSGTDFTLTISSVQPEDFATYYCQKTLRTWTFGQGTKVEI-- 105 usage_00295.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSVQPEDFATYYCQKTLRTWTFGQGTKVEI-- 104 usage_00299.pdb 53 LAEGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCLQHGESPWTFGQGTKVEI- 105 usage_00300.pdb 53 LAEGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCLQHGESPWTFGQGTKVEI- 105 usage_00301.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQQNSNWTFGQGTKVDI-- 104 usage_00306.pdb 53 LRPGVPSRFSSSGYGTDFTLTISKLQPEDFATYYCLQSDNLPFTFGQGTKLEI- 105 usage_00324.pdb 54 LQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI-- 105 usage_00328.pdb 52 LADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEI- 104 usage_00329.pdb 52 LADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEI- 104 usage_00330.pdb 52 LADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEI- 104 usage_00331.pdb 52 LADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEI- 104 G PSRFsg G tIS D Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################