################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:53:01 2021 # Report_file: c_0148_6.html ################################################################################################ #==================================== # Aligned_structures: 56 # 1: usage_00021.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00046.pdb # 6: usage_00065.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00068.pdb # 10: usage_00088.pdb # 11: usage_00092.pdb # 12: usage_00093.pdb # 13: usage_00094.pdb # 14: usage_00095.pdb # 15: usage_00148.pdb # 16: usage_00149.pdb # 17: usage_00177.pdb # 18: usage_00179.pdb # 19: usage_00184.pdb # 20: usage_00185.pdb # 21: usage_00186.pdb # 22: usage_00187.pdb # 23: usage_00188.pdb # 24: usage_00189.pdb # 25: usage_00227.pdb # 26: usage_00228.pdb # 27: usage_00229.pdb # 28: usage_00230.pdb # 29: usage_00231.pdb # 30: usage_00232.pdb # 31: usage_00233.pdb # 32: usage_00234.pdb # 33: usage_00235.pdb # 34: usage_00236.pdb # 35: usage_00237.pdb # 36: usage_00238.pdb # 37: usage_00239.pdb # 38: usage_00240.pdb # 39: usage_00241.pdb # 40: usage_00242.pdb # 41: usage_00243.pdb # 42: usage_00244.pdb # 43: usage_00245.pdb # 44: usage_00252.pdb # 45: usage_00253.pdb # 46: usage_00254.pdb # 47: usage_00256.pdb # 48: usage_00269.pdb # 49: usage_00270.pdb # 50: usage_00278.pdb # 51: usage_00303.pdb # 52: usage_00316.pdb # 53: usage_00317.pdb # 54: usage_00318.pdb # 55: usage_00319.pdb # 56: usage_00326.pdb # # Length: 110 # Identity: 42/110 ( 38.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/110 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/110 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 --VLTQSPGTLSLSPGETASLSCTAASYG------HMTWYQKKPGQPPKLLIFATSKRAS 52 usage_00043.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00044.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 56 usage_00045.pdb 1 -IVLTQSPATLSLSPGERATLSCMTSTDID----DDMNWYQQKPGQAPRLLISEGNTLRP 55 usage_00046.pdb 1 -IVLTQSPATLSLSPGERATLSCMTSTDID----DDMNWYQQKPGQAPRLLISEGNTLRP 55 usage_00065.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00066.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00067.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00068.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00088.pdb 1 EIVLTQSPGTQSLSPGERATLSCRASQSVG---NNKLAWYQQRPGQAPRLLIYGASSRPS 57 usage_00092.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG---SSYLAWYQQKPGQAPRLLIYGASSRAP 56 usage_00093.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG---SSYLAWYQQKPGQAPRLLIYGASSRAP 56 usage_00094.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG---SSYLAWYQQKPGQAPRLLIYGASSRAP 56 usage_00095.pdb 1 -TVLTQSPGTLSLSPGERATLSCRASQSLG---SSYLAWYQQKPGQAPRLLIYGASSRAP 56 usage_00148.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 56 usage_00149.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLES 60 usage_00177.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKSIS----KYLAWYQQKPGQAPRLLIYSGSTLQS 56 usage_00179.pdb 1 -IVLTQSPGTQSLSPGERATLSCRASQSVG---NNKLAWYQQRPGQAPRLLIYGASSRPS 56 usage_00184.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00185.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00186.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00187.pdb 1 EIVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 56 usage_00188.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00189.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00227.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00228.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00229.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00230.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00231.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 56 usage_00232.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00233.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 56 usage_00234.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 56 usage_00235.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00236.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00237.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00238.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00239.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00240.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 56 usage_00241.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00242.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 usage_00243.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00244.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00245.pdb 1 DIVLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 57 usage_00252.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 54 usage_00253.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 55 usage_00254.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSVS---SSYLAWYQQKPGQAPRLLIYGASSRAT 57 usage_00256.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSVS----SYLAWYQQKPGQAPRLLIYDASNRAT 56 usage_00269.pdb 1 --VLTQSPGTLSLSPGEGATLSCRASQSVD---SSSLAWYQQKPGQAPRLLIFAGSSRAT 55 usage_00270.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSVS---SSYLAWYQQKPGQAPRLLIYGASSRAT 57 usage_00278.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLES 60 usage_00303.pdb 1 -IVLTQSPATLSLSPGERATLSCMTSTDID----DDMNWYQQKPGQAPRLLISEGNTLRP 55 usage_00316.pdb 1 -IVLTQSPATLSVSPGERATISCRASQRVSSSTYSYMHWYQQKPGQPPKLLIKYASNLES 59 usage_00317.pdb 1 -IVLTQSPATLSVSPGERATISCRASQRVSSSTYSYMHWYQQKPGQPPKLLIKYASNLES 59 usage_00318.pdb 1 -IVLTQSPATLSVSPGERATISCRASQRVSSSTYSYMHWYQQKPGQPPKLLIKYASNLES 59 usage_00319.pdb 1 -IALTQSPGTLSLSPGERATLSCRASQSFS---SSYLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00326.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVS---SNYLAWYQQKPGQAPRLLIYDSSSRAT 55 v TQSP T S SPGE At SC s WYQq PGQ P LLI usage_00021.pdb 53 GIPDRFSGSQFGKQYTLTITRMEPEDFARYYCQQL----EFFGQGTRLEI 98 usage_00043.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQY----EFFGQGTKLEI 101 usage_00044.pdb 57 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQY----EFFGQGTKLEI 102 usage_00045.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSFNVPLTFGQGTKVEI 105 usage_00046.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSFNVPLTFGQGTKVEI 105 usage_00065.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 107 usage_00066.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 105 usage_00067.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 107 usage_00068.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 105 usage_00088.pdb 58 GVADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGQSLSTFGQGTKVEV 107 usage_00092.pdb 57 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYADSPITFGQGTRLEI 106 usage_00093.pdb 57 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYADSPITFGQGTRLEI 106 usage_00094.pdb 57 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYADSPITFGQGTRLEI 106 usage_00095.pdb 57 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYADSPITFGQGTRLEI 106 usage_00148.pdb 57 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEI 106 usage_00149.pdb 61 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEI 110 usage_00177.pdb 57 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHDYPYTFGQGTKLEI- 105 usage_00179.pdb 57 GVADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGQSLSTFGQGTKVEV 106 usage_00184.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 105 usage_00185.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 105 usage_00186.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 105 usage_00187.pdb 57 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 106 usage_00188.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 105 usage_00189.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEI 105 usage_00227.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQSSNWPRTFGQGTKVEI 105 usage_00228.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQSSNWPRTFGQGTKVEI 105 usage_00229.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00230.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 107 usage_00231.pdb 57 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 106 usage_00232.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00233.pdb 57 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 105 usage_00234.pdb 57 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 105 usage_00235.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00236.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00237.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00238.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00239.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00240.pdb 57 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 105 usage_00241.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00242.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 104 usage_00243.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00244.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00245.pdb 58 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVE- 106 usage_00252.pdb 55 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGQGTKVEI 104 usage_00253.pdb 56 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGQGTKVEI 105 usage_00254.pdb 58 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGQGTKVEI 107 usage_00256.pdb 57 GIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGQGTKVEI 106 usage_00269.pdb 56 GIPDRFSGKTSGTDFTLTISRLEPEDFAVYYCQQCGNSPWTFGQGTKVEI 105 usage_00270.pdb 58 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEI 107 usage_00278.pdb 61 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEI 110 usage_00303.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSFNVPLTFGQGTKVEI 105 usage_00316.pdb 60 GVPARFSGSGSGTDFTLTISSVEPEDFATYYCQHSWEIPPTFGGGTKLEI 109 usage_00317.pdb 60 GVPARFSGSGSGTDFTLTISSVEPEDFATYYCQHSWEIPPTFGGGTKLEI 109 usage_00318.pdb 60 GVPARFSGSGSGTDFTLTISSVEPEDFATYYCQHSWEIPPTFGGGTKLEI 109 usage_00319.pdb 57 GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQKYGTSAITFGQGTRLEI 106 usage_00326.pdb 56 GVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI 105 G RFSGs sGtdfTLTIs EPEDFA YYC fg gt e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################