################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:29 2021 # Report_file: c_0853_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00054.pdb # 2: usage_00084.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_00331.pdb # 6: usage_00333.pdb # 7: usage_00416.pdb # # Length: 81 # Identity: 20/ 81 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 81 ( 60.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 81 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 -DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 59 usage_00084.pdb 1 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 60 usage_00124.pdb 1 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 60 usage_00125.pdb 1 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 60 usage_00331.pdb 1 SDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSE-TSREGFLLAQDISSYSLTI 59 usage_00333.pdb 1 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 60 usage_00416.pdb 1 -DAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPA 59 Da id Fa lgk w DG vHSIgFAp l Gd tREgF iAhDISsYSf a usage_00054.pdb 60 MAKACRSMLNPGSALLTLSYL 80 usage_00084.pdb 61 MAKACRSMLNPGSALLTLSYL 81 usage_00124.pdb 61 MAKACRSMLNPGSALLTLSYL 81 usage_00125.pdb 61 MAKACRSMLNPGSALLTLSYL 81 usage_00331.pdb 60 VAHEAKKLMPEGGSIVAT--- 77 usage_00333.pdb 61 MAKACRSMLNPGSALLTLSYL 81 usage_00416.pdb 60 LAKAALPMLSDDASLLTLSYL 80 Aka ml g lltl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################