################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:56 2021 # Report_file: c_1208_149.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00204.pdb # 2: usage_00219.pdb # 3: usage_00220.pdb # 4: usage_01486.pdb # 5: usage_02159.pdb # 6: usage_02269.pdb # # Length: 27 # Identity: 6/ 27 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 27 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 27 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 --RPLCGSDNKTYGNKCNFCNAVVES- 24 usage_00219.pdb 1 --RPVCGTDGDTYPNECVLCFENR--- 22 usage_00220.pdb 1 --RPVCGTDGDTYPNECVLCFENRKRQ 25 usage_01486.pdb 1 --NPVCGTDGVTYDNECVLCAHNLEQG 25 usage_02159.pdb 1 SDEPVCASDNATYASECAMKEAACSSG 27 usage_02269.pdb 1 --RPVCGTDGDTYPNECVLCFENRK-- 23 PvCg D TY neC c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################