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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:18:03 2021
# Report_file: c_1394_67.html
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#====================================
# Aligned_structures: 18
#   1: usage_00075.pdb
#   2: usage_00267.pdb
#   3: usage_00397.pdb
#   4: usage_00399.pdb
#   5: usage_00419.pdb
#   6: usage_00652.pdb
#   7: usage_00670.pdb
#   8: usage_00735.pdb
#   9: usage_00736.pdb
#  10: usage_00738.pdb
#  11: usage_00773.pdb
#  12: usage_00824.pdb
#  13: usage_00827.pdb
#  14: usage_00828.pdb
#  15: usage_01000.pdb
#  16: usage_01206.pdb
#  17: usage_01270.pdb
#  18: usage_01278.pdb
#
# Length:        108
# Identity:        3/108 (  2.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     14/108 ( 13.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           93/108 ( 86.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00075.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIMVIAFL   22
usage_00267.pdb         1  -NNESFVIYMFVVHFIIPLIVIFFCYGQL-----------TQKAEKEVTRMVIIMVIAFL   48
usage_00397.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00399.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00419.pdb         1  ----------------IPLIVIFFCYGQLVFTVKEAAAATTQKAEKEVTRMVIIMVIAFL   44
usage_00652.pdb         1  ------------------------------------------------ICWLPYAGVAFY   12
usage_00670.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00735.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00736.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00738.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIYVIAFL   22
usage_00773.pdb         1  S-------------------------------------ATTQKAEKEVTRMVIIMVIAFL   23
usage_00824.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIMVIAFL   22
usage_00827.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIMVIAFL   22
usage_00828.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIMVIAFL   22
usage_01000.pdb         1  --------------------------------------ATTQKAEKEVTRMVIIMVIAFL   22
usage_01206.pdb         1  S-------------------------------------ATTQKAEKEVTRMVIIMVIAFL   23
usage_01270.pdb         1  ---------------------------------------TTQKAEKEVTRMVIIMVIAFL   21
usage_01278.pdb         1  ---------------------------------------TTQKAEKEVTRMVIIMVIAFL   21
                                                                           trmvii viAFl

usage_00075.pdb        23  ICWLPYAGVAFYIFTHQGSDFGPIFMTIP-AFFAKTSAV---------   60
usage_00267.pdb        49  ICWLPYAGVAFYIFTH--------------------------------   64
usage_00397.pdb        23  ICWVPYASVAFYIFTHQGSCFGPIFMTIP-AFFAKSAAI---------   60
usage_00399.pdb        23  ICWVPYASVAFYIFTHQGSCFGPIFMTIP-AFFAKSAAI---------   60
usage_00419.pdb        45  ICWLPYAGVAFYIFT---------------------------------   59
usage_00652.pdb        13  IFT------------HQG-----SDFGPIFMTIPAFFAK-TSA---VY   39
usage_00670.pdb        23  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAVYNPVI----   65
usage_00735.pdb        23  ICWVPYASVAFYIFTHQGSCFGPIFMTIP-AFFAKSAAI---------   60
usage_00736.pdb        23  ICWVPYASVAFYIFTHQGSCFGPIFMTIP-AFFAKSAAI---------   60
usage_00738.pdb        23  ICWVPYASVAFYIFTHQGSCFGPIFMTIP-AFFAKSAAI---------   60
usage_00773.pdb        24  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAV---------   61
usage_00824.pdb        23  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAVYNPVI----   65
usage_00827.pdb        23  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAVYNPVI----   65
usage_00828.pdb        23  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAVYNPVI----   65
usage_01000.pdb        23  ICWLPYAGVAFYIFTHQGSDFGPIFMTIP-AFFAKTSAV---------   60
usage_01206.pdb        24  ICWLPYAGVAFYIFTHQGSCFGPIFMTIP-AFFAKTSAVYNPVI----   66
usage_01270.pdb        22  ICWLPYAGVAFYIFTHQGSDFGPIFMTIP-AFFAKTSAV---------   59
usage_01278.pdb        22  ICWLPYAGVAFYIFTHQGSDFGPIFMTIP-AFFAKTSAVYNPVIYIM-   67
                           Icw                                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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