################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:52 2021 # Report_file: c_0680_19.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00080.pdb # 4: usage_00186.pdb # 5: usage_00379.pdb # 6: usage_00879.pdb # 7: usage_00880.pdb # 8: usage_00881.pdb # 9: usage_00882.pdb # 10: usage_01121.pdb # 11: usage_01382.pdb # 12: usage_01383.pdb # # Length: 65 # Identity: 18/ 65 ( 27.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 65 ( 41.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 65 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -----PPINLPEN-SGPFPQELVRIRSGRD--LSLRYSVTGPGADQPPTGIFIINPISGQ 52 usage_00014.pdb 1 -------INLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQ 53 usage_00080.pdb 1 ----WVIPPISLP-KGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGW 55 usage_00186.pdb 1 -----PPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGW 55 usage_00379.pdb 1 V---VAPISVPENGKGPFPQRLNQLKS-------IFYSITGPGADSPPEGVFAVEKETGW 50 usage_00879.pdb 1 ------PISCPENEEGEFPKNLVQIKSN----TKVFYSITGQGADKPPVGVFIIERETGW 50 usage_00880.pdb 1 -----PPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGW 55 usage_00881.pdb 1 ------PISCPENEKGEFPKNLVQIKSNR--ETKVFYSITGQGADKPPVGVFIIERETGW 52 usage_00882.pdb 1 ------PISCPENEKGEFPKNLVQIKS-----TKVFYSITGQGADKPPVGVFIIERETGW 49 usage_01121.pdb 1 -DWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGW 59 usage_01382.pdb 1 -----PPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGW 55 usage_01383.pdb 1 ------PISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGW 54 i pen G FP Lv i S YS TG GAD PP G Fii G usage_00013.pdb 53 LSVTK 57 usage_00014.pdb 54 LSVTK 58 usage_00080.pdb 56 LKV-- 58 usage_00186.pdb 56 LKVTQ 60 usage_00379.pdb 51 LLLNK 55 usage_00879.pdb 51 LKVTQ 55 usage_00880.pdb 56 LKVTQ 60 usage_00881.pdb 53 LKVTQ 57 usage_00882.pdb 50 LKVTQ 54 usage_01121.pdb 60 LKVTQ 64 usage_01382.pdb 56 LKVTQ 60 usage_01383.pdb 55 LKVTQ 59 L v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################