################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:12 2021 # Report_file: c_1038_22.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00064.pdb # 2: usage_00111.pdb # 3: usage_00112.pdb # 4: usage_00113.pdb # 5: usage_00149.pdb # 6: usage_00203.pdb # 7: usage_00204.pdb # 8: usage_00205.pdb # 9: usage_00206.pdb # 10: usage_00209.pdb # 11: usage_00227.pdb # 12: usage_00341.pdb # 13: usage_00342.pdb # 14: usage_00384.pdb # # Length: 44 # Identity: 4/ 44 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 44 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 44 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 -PAVLIFFPAAFSPV-CTKELCTFRDK-AQLEKANAEVLAIS-- 39 usage_00111.pdb 1 -YIVLFFYPMDFTFV-CPTEIIAFSDRYLEFEKLNTQVIAVSC- 41 usage_00112.pdb 1 -YIVLFFYPMDFTFV-CPTEIIAFSDRYLEFEKLNTQVIAVSC- 41 usage_00113.pdb 1 -YIVLFFYPM----V-CPTEIIAFSDRYLEFEKLNTQVIAVSC- 37 usage_00149.pdb 1 ---LLYFYPLDFTFV-CPSEIIALDKALDAFHERNVELLGCSV- 39 usage_00203.pdb 1 -YVVLFFYPADFTFV-PPTEIIAFSDQVEEFNSRNCQVIACSTD 42 usage_00204.pdb 1 KYVVLFFYPADFTFV-PPTEIIAFSDQVEEFNSRNCQVIACST- 42 usage_00205.pdb 1 KYVVLFFYPADFTFV-PPTEIIAFSDQVEEFNSRNCQVIACST- 42 usage_00206.pdb 1 -YVVLFFYPADFTFVP-PTEIIAFSDQVEEFNSRNCQVIACST- 41 usage_00209.pdb 1 -NVLLVFHPLAFTGI-CQGELDQLRDHLPEFENDDSAALAISV- 41 usage_00227.pdb 1 -YVVLFFYPADFTFV-CPTEIIAFSDQVEEFNSRNCQVIACST- 41 usage_00341.pdb 1 KYLVFFFYPLDFTFV-SPTEIIAFGDRLEEFRSINTEVVACSV- 42 usage_00342.pdb 1 -YLVFFFYPLDFTFV-SPTEIIAFGDRLEEFRSINTEVVACSV- 41 usage_00384.pdb 1 ---LLYFYPLDFTFV-CPSEIIALDKALDAFHERNVELLGCSV- 39 F P v E f n S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################