################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:47 2021 # Report_file: c_0539_8.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00044.pdb # 7: usage_00045.pdb # 8: usage_00046.pdb # 9: usage_00047.pdb # 10: usage_00048.pdb # 11: usage_00075.pdb # # Length: 153 # Identity: 121/153 ( 79.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 137/153 ( 89.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/153 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00014.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00030.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00031.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00032.pdb 1 ------------RPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAM 48 usage_00044.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00045.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00046.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00047.pdb 1 --------FDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 52 usage_00048.pdb 1 GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 60 usage_00075.pdb 1 ------------RPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAM 48 RPvVAAGAVGLAQRALDEATKYALERKTFGKLLvEHQaISFmLAeMAM usage_00013.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00014.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00030.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00031.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00032.pdb 49 KVELARLSYQRAAWEIDSGRRNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTEYPVE 108 usage_00044.pdb 61 EVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00045.pdb 61 EVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00046.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00047.pdb 53 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 112 usage_00048.pdb 61 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 120 usage_00075.pdb 49 KVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVE 108 VELARmSYQRAAWEvDSGRRNTYYASIAKAfAgDIANQLATDAVQilGGNGFNTEYPVE usage_00013.pdb 121 KLMRDAKIYQIYGGTSQIQRLIVAREHIDKYK- 152 usage_00014.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00030.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00031.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00032.pdb 109 KLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK- 140 usage_00044.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00045.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00046.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00047.pdb 113 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKYKN 145 usage_00048.pdb 121 KLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00075.pdb 109 KLMRDAKIYQIYGGTSQIQRLIVAREHIDKY-- 139 KLMRDAKIYQIY GTsQIQRlIvAREHIdkY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################