################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:51 2021 # Report_file: c_0040_2.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # 9: usage_00022.pdb # 10: usage_00034.pdb # 11: usage_00058.pdb # 12: usage_00063.pdb # 13: usage_00088.pdb # 14: usage_00089.pdb # 15: usage_00096.pdb # 16: usage_00105.pdb # 17: usage_00106.pdb # 18: usage_00107.pdb # 19: usage_00108.pdb # 20: usage_00109.pdb # 21: usage_00130.pdb # # Length: 232 # Identity: 95/232 ( 40.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 211/232 ( 90.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/232 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00004.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00005.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00006.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00007.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00017.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00018.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00019.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00022.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00034.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00058.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00063.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00088.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00089.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00096.pdb 1 SPYGIASVLGMAQMGAYGATLKLLASKMGYSLQERGMPKLQRLLQRDLAS--ED-GVEVA 57 usage_00105.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00106.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00107.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00108.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00109.pdb 1 SPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 60 usage_00130.pdb 1 --YGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEISTT 58 YGvASVLaMlQlttgGeTqqqiqaaMGfkiddkGMapalRhLykeLmg nk eistt usage_00001.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00004.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00005.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00006.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00007.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00017.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00018.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00019.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00022.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00034.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00058.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00063.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00088.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00089.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00096.pdb 58 SGVMVDRKIILEKVFRRSLSKAFQSVPHQIDFSQPEMARQVINSWTSDHTDGMISEFLPS 117 usage_00105.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00106.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00107.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00108.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 120 usage_00109.pdb 61 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISHLLGT 120 usage_00130.pdb 59 DAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGK 118 daifVqRdlkLvqgFmphffrlFrStvkQvDFSevErARfiINdWvktHTkGMIS lLg usage_00001.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00004.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00005.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00006.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00007.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00017.pdb 121 GAVQQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00018.pdb 121 GAVQQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00019.pdb 121 GAVQQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00022.pdb 121 GAVQQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00034.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00058.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00063.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00088.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00089.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00096.pdb 118 GVLSELTRLVFLNALHFHGVWKTPFDPRNTREQLFHTVNGSAVSVPMMTTTQKFNYGEFV 177 usage_00105.pdb 121 GAVDQLTRLVLVNALYFNGQFKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00106.pdb 121 GAVDQLTRLVLVNALYFNGQFKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00107.pdb 121 GAVDQLTRLVLVNALYFNGQFKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00108.pdb 121 GAVDQLTRLVLVNALYFNGQFKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00109.pdb 121 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 180 usage_00130.pdb 119 GAVDQLTRLVLVNALYFNGCWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 178 Gav qLTRLVlvNALyFnG KTPFpdssThrrLFHksdGStVSVPMMaqTnKFNYtEFt usage_00001.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKG-- 230 usage_00004.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00005.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNM 232 usage_00006.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00007.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00017.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00018.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00019.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00022.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00034.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00058.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00063.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00088.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00089.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00096.pdb 178 SKDGVDYDVIEMPYEGESISMLLVTPFEKDVPLSALNKELS----------- 218 usage_00105.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNM 232 usage_00106.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNM 232 usage_00107.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00108.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNM 232 usage_00109.pdb 181 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 231 usage_00130.pdb 179 TPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGN- 229 tpDGhyYDilElPYhGdtlSMfiaaPyEKeVPLSALtniLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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