################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:03 2021 # Report_file: c_1399_226.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00626.pdb # 2: usage_00628.pdb # 3: usage_00790.pdb # 4: usage_00979.pdb # 5: usage_01476.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 79 ( 1.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 79 ( 72.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00626.pdb 1 PEE-------VNRTLLQIVQ----AF-AS----------IRSVAEKALSEEW--N---NI 33 usage_00628.pdb 1 PEE-------VNRTLLQIVQ----AF-AS------PDNQIRSVAEKALSEEW--E--NNI 38 usage_00790.pdb 1 -----------PQEVQRALA----RI-LC----------ALGELDKLVKDQA----NAGQ 30 usage_00979.pdb 1 ---RIHVFPYDSHAVRSLSAVLTPACIALQGESDE-AGEWLDYTVEFLA----------- 45 usage_01476.pdb 1 ------------NILKQIFK----LL-QA-----P-FRHICRLCYRVLRHSQQDYR-KNQ 36 l usage_00626.pdb 34 EYLLTFLAEQAA------- 45 usage_00628.pdb 39 EYLLTFLAEQAA------- 50 usage_00790.pdb 31 QEFK--------LPKDFTG 41 usage_00979.pdb ------------------- usage_01476.pdb 37 EYIAKQFG----------- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################