################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:01 2021 # Report_file: c_0888_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00089.pdb # 2: usage_00475.pdb # 3: usage_00476.pdb # 4: usage_00477.pdb # 5: usage_00478.pdb # 6: usage_00479.pdb # 7: usage_00480.pdb # 8: usage_00481.pdb # 9: usage_00698.pdb # 10: usage_00729.pdb # # Length: 146 # Identity: 28/146 ( 19.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/146 ( 43.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/146 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 ASTYISNANKILNRSFNVISTYHNHLKTWENNPNPQNTQD-VRTQIQLVHYHFQNVIPEL 59 usage_00475.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00476.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00477.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00478.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00479.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00480.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00481.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLF 59 usage_00698.pdb 1 -EFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLL 59 usage_00729.pdb 1 AEYARAKALAELEGLGNNYQLYLTALEEWQENPSSTRVLRDVRNRFEILDSLFTQYMPSF 60 e ar A Legl N yq Y eWe P R qf s t iP usage_00089.pdb 60 VNSCPPNPSDCDYYNILVLSSYAQAANLHLTVLNQAVKFEAYLKNNTAI--------DYY 111 usage_00475.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00476.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00477.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00478.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00479.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00480.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00481.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00698.pdb 60 AV-Q--------NYQVPLLSVYVQAANLHLSVLRDVSVFGQRW------GFDAATINSRY 104 usage_00729.pdb 61 RV-T--------GYEVPLLSVYAQAANLHLLLLKDASIFGEEW------GFSTTAINNYY 105 v Y vplLSvY QAANLHL vL d s Fg w Y usage_00089.pdb 112 PVLTKAIEDYTNYCVTTYKKGLNLIK 137 usage_00475.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00476.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00477.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00478.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00479.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00480.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00481.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00698.pdb 105 NDLTRLIGNYTDYAVRWYNTGLERVW 130 usage_00729.pdb 106 NRQMSLIAQYSDHCVQWYRTGLDRLK 131 n lt lI Ytdy V wY tGL r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################