################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:49:34 2021 # Report_file: c_0145_17.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00033.pdb # 2: usage_00053.pdb # 3: usage_00057.pdb # 4: usage_00058.pdb # 5: usage_00186.pdb # 6: usage_00190.pdb # 7: usage_00200.pdb # 8: usage_00229.pdb # 9: usage_00230.pdb # 10: usage_00303.pdb # 11: usage_00306.pdb # 12: usage_00307.pdb # 13: usage_00499.pdb # 14: usage_00503.pdb # 15: usage_00515.pdb # 16: usage_00530.pdb # 17: usage_00531.pdb # # Length: 126 # Identity: 40/126 ( 31.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/126 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/126 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWIRQTPDKRLEWVATISSGGSYTYY 59 usage_00053.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYY 59 usage_00057.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYY 59 usage_00058.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYY 59 usage_00186.pdb 1 -VKLVESGGGLVQPGGSLKLSCATSGFTFSDYYIYWVRQTPEKRLEWVAYISNGGYKTYY 59 usage_00190.pdb 1 -VQLVESGGDLVKPGGSLKLSCAASGFTFSRCAMSWVRQTPEKRLEWVAGISSGGSYTFY 59 usage_00200.pdb 1 EVTLVESGGDSVKPGGSLKLSCAASGFTLSGETMSWVRQTPEKRLEWVATTLSGGGFTFY 60 usage_00229.pdb 1 -VKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINY 59 usage_00230.pdb 1 -VKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINY 59 usage_00303.pdb 1 -VHLVESGGGLVKPGGSLKLSCAASGFTFSGYYMYWVRQTPEKRLEWVASISDGGSFTYY 59 usage_00306.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFIFSNYAMSWVRQTPEKRLEWVATISGGGRNIYS 59 usage_00307.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFIFSNYAMSWVRQTPEKRLEWVATISGGGRNIYS 59 usage_00499.pdb 1 -VKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNSLYTSY 59 usage_00503.pdb 1 -VKLVESGGGLVKLGGSLKLSCAASGFTFSNYFMSWVRQTPEKRLELVAVITSNGDNTYY 59 usage_00515.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYY 59 usage_00530.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGTYTYY 59 usage_00531.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGTYTYY 59 V L ESGG lV pGGS kLSCAaSGF fs m WvRQ P K LEw i usage_00033.pdb 60 PDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMFYCARQTT-------MTYF--AYWGQG 110 usage_00053.pdb 60 SDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEV-------RQRGF-DYWGQG 111 usage_00057.pdb 60 SDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEV-------RQRGF-DYWGQG 111 usage_00058.pdb 60 SDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEV-------RQRGF-DYWGQG 111 usage_00186.pdb 60 PDTVKGRFTISRDNAKNILYLQMSRLKSEDTGIYYCARGM--------------DYWGQG 105 usage_00190.pdb 60 PDTVKGRFIISRNNARNTLSLQMSSLRSEDTAIYYCTRYSS-------DPFYF-DYWGQG 111 usage_00200.pdb 61 SASVKGRFTISRDNAQNNLYLQLNSLRSEDTALYFCASH---------RF----VHWGHG 107 usage_00229.pdb 60 TPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETG-------TRF---DYWGQG 109 usage_00230.pdb 60 TPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETG-------TRF---DYWGQG 109 usage_00303.pdb 60 PDSVKGRFTISRDNAKNNLYLQMSSLRSDDTAMYYCSRPDD-------YSYDGFAYWGQG 112 usage_00306.pdb 60 LDSVKGRFTFFRDNARNTLYLQMSSLRSEDTAMYFCSRENY-------GSSF--TYWGQG 110 usage_00307.pdb 60 LDSVKGRFTFFRDNARNTLYLQMSSLRSEDTAMYFCSRENY-------GSSF--TYWGQG 110 usage_00499.pdb 60 PDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDDYYGKSPYFF----DVWGAG 115 usage_00503.pdb 60 PDTVKGRFTISRDNAQNTLYLQMSSLKSEDTALYYCARRDS-------SASLYFDYWGQG 112 usage_00515.pdb 60 SDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEV-------RQRGF-DYWGQG 111 usage_00530.pdb 60 PDSVKGRFTISRDNAENTLYLQMSSLRSEDTAMYYCVRDGN-------SM----DYWGQG 108 usage_00531.pdb 60 PDSVKGRFTISRDNAENTLYLQMSSLRSEDTAMYYCVRDGN-------SM----DYWGQG 108 F RdNA N L L ms SeDTa y C r WG G usage_00033.pdb 111 TLVTVS 116 usage_00053.pdb 112 TTLTVS 117 usage_00057.pdb 112 TTLTV- 116 usage_00058.pdb 112 TTLTVS 117 usage_00186.pdb 106 TSVTV- 110 usage_00190.pdb 112 TTLTVS 117 usage_00200.pdb 108 TLVTV- 112 usage_00229.pdb 110 TTLTV- 114 usage_00230.pdb 110 TTLTV- 114 usage_00303.pdb 113 TLVTV- 117 usage_00306.pdb 111 TLVTV- 115 usage_00307.pdb 111 TLVTVS 116 usage_00499.pdb 116 TTVTA- 120 usage_00503.pdb 113 TTLTV- 117 usage_00515.pdb 112 TTLTVS 117 usage_00530.pdb 109 TSVTVS 114 usage_00531.pdb 109 TSVTVS 114 T Tv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################