################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:11:53 2021 # Report_file: c_0542_8.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00049.pdb # 2: usage_00054.pdb # 3: usage_00055.pdb # 4: usage_00056.pdb # 5: usage_00057.pdb # 6: usage_00058.pdb # 7: usage_00059.pdb # 8: usage_00119.pdb # 9: usage_00120.pdb # 10: usage_00121.pdb # 11: usage_00122.pdb # 12: usage_00123.pdb # 13: usage_00204.pdb # 14: usage_00205.pdb # 15: usage_00208.pdb # 16: usage_00209.pdb # 17: usage_00210.pdb # 18: usage_00211.pdb # 19: usage_00212.pdb # # Length: 229 # Identity: 57/229 ( 24.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 160/229 ( 69.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/229 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 --LNSQFMQVYETLKSELIHD--PLFEFDDDSRQWVERMIDYTVPGGKMVRGYSVVDSYQ 56 usage_00054.pdb 1 MASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 60 usage_00055.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00056.pdb 1 --SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 58 usage_00057.pdb 1 MASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 60 usage_00058.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00059.pdb 1 --SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 58 usage_00119.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00120.pdb 1 ---MERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 57 usage_00121.pdb 1 --ASERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRI--DTTCLGGKYFRG-TVVNVAE 55 usage_00122.pdb 1 --ASERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRI--DTTCLGGKYFRG-TVVNVAE 55 usage_00123.pdb 1 ---SERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRI--DTTCLGGKYFRG-TVVNVAE 54 usage_00204.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00205.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00208.pdb 1 MASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 60 usage_00209.pdb 1 -ASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 59 usage_00210.pdb 1 --SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 58 usage_00211.pdb 1 --SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 58 usage_00212.pdb 1 --SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAE 58 erFlsVYdevqafLldq skyEiDpnrarylri DtTclGGKyfRG tVVnvae usage_00049.pdb 57 LLKG-EEL----TDDEIFLSSALGWCIEWLQAYFLVLDDIMDESH--TRRGQPCWFRLPK 109 usage_00054.pdb 61 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 118 usage_00055.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00056.pdb 59 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 116 usage_00057.pdb 61 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 118 usage_00058.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00059.pdb 59 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 116 usage_00119.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00120.pdb 58 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 115 usage_00121.pdb 56 GFLAVTQHDEATKERILHDACVGGW-IEFLQAHYLVEDDID----GSVRRGKPCWYRFPG 110 usage_00122.pdb 56 GFLAVTQHDEATKERILHDACVGGW-IEFLQAHYLVEDDID----GSVRRGKPCWYRFPG 110 usage_00123.pdb 55 GFLAVTQHDEATKERILHDACVGGW-IEFLQAHYLVEDDID----GSVRRGKPCWYRFPG 109 usage_00204.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00205.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00208.pdb 61 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 118 usage_00209.pdb 60 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 117 usage_00210.pdb 59 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 116 usage_00211.pdb 59 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 116 usage_00212.pdb 59 GFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSV--MRRGKPCWYRFPG 116 gfla tqh kerilhdacvgGW IEfLQAhyLVeDDI RRGkPCWyRfPg usage_00049.pdb 110 VG-MIAANDGILLRNHVPRILKKHFRGKPY-YVDLVDLFNEVEFQTASGQMIDLITT-LV 166 usage_00054.pdb 119 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 176 usage_00055.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00056.pdb 117 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 174 usage_00057.pdb 119 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 176 usage_00058.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00059.pdb 117 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 174 usage_00119.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00120.pdb 116 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 173 usage_00121.pdb 111 VTTQCAINDGIILKSWTQI-AWHYFADR-PFLKDLLCLFQKVDYATAVGQY-DVT-SCD- 165 usage_00122.pdb 111 VTTQCAINDGIILKSWTQI-AWHYFADR-PFLKDLLCLFQKVDYATAVGQY-DVT-SCD- 165 usage_00123.pdb 110 VTTQCAINDGIILKSWTQI-AWHYFADR-PFLKDLLCLFQKVDYATAVGQY-DVT-SCD- 164 usage_00204.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00205.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00208.pdb 119 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 176 usage_00209.pdb 118 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 175 usage_00210.pdb 117 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 174 usage_00211.pdb 117 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 174 usage_00212.pdb 117 VTTQCAINDGIILKSWTQIMAWHYFADRPF-LKDLLCLFQKVDYATAVGQMYDVTSMCD- 174 Vt qcAiNDGIiLkswtqi awhyFadr lkDLlcLFqkVdyaTAvGQ Dvt d usage_00049.pdb 167 -------------KDLSKYSLSIHRRIVQYKTA---------------- 186 usage_00054.pdb 177 SNKLDPEVAQPMTTDFAEFTPAIYKRI---------------------- 203 usage_00055.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRI---------------------- 202 usage_00056.pdb 175 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 207 usage_00057.pdb 177 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 209 usage_00058.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 208 usage_00059.pdb 175 SNKLDPEVAQPMTTDFAEFTPAIYKRI---------------------- 201 usage_00119.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSE 224 usage_00120.pdb 174 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 206 usage_00121.pdb 166 SNKLDPEVAQP-TTDFAEFTPAIYKRIVKYKTT---------------- 197 usage_00122.pdb 166 SNKLDPEVAQP-TTDFAEFTPAIYKRIVKYKTT---------------- 197 usage_00123.pdb 165 SNKLDPEVAQP-TTDFAEFTPAIYKRIVKYKTT---------------- 196 usage_00204.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSE 224 usage_00205.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 208 usage_00208.pdb 177 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 209 usage_00209.pdb 176 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 208 usage_00210.pdb 175 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 207 usage_00211.pdb 175 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVS- 222 usage_00212.pdb 175 SNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTT---------------- 207 tDfaeftpaIykRI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################