################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:25 2021 # Report_file: c_0495_17.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00009.pdb # 2: usage_00174.pdb # 3: usage_00175.pdb # 4: usage_00176.pdb # 5: usage_00177.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00208.pdb # 9: usage_00220.pdb # 10: usage_00241.pdb # 11: usage_00242.pdb # # Length: 108 # Identity: 2/108 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/108 ( 12.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/108 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 ELEHLREYTDRIG-NFHNNIIFDDDLPIGFITYW-DF---D-----EFYYVEHFATNPAL 50 usage_00174.pdb 1 DSEHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 55 usage_00175.pdb 1 --EHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 53 usage_00176.pdb 1 --EHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 53 usage_00177.pdb 1 --EHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 53 usage_00178.pdb 1 DSEHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 55 usage_00179.pdb 1 --EHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 53 usage_00208.pdb 1 ----YNEYIN-KP-NQIIYIALLHNQIIGFIVLKKNW---N-----NYAYIEDITVDKKY 46 usage_00220.pdb 1 ---AFFSALF-AEDVHFTQMAYYSEIPVGGLVAKLVPLSLK------GIQIEFLGVLPNY 50 usage_00241.pdb 1 DSEHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 55 usage_00242.pdb 1 DSEHLQKLLN-QN-NFYVFVALLENKIVGGLTSYVLE---QYYSEKPLAYIYDLAVDTNW 55 n a G yi v usage_00009.pdb 51 RNGGYGKRTLEHLCEFLK-----RPIVLEVERPVEEAKRRINFYQRHG 93 usage_00174.pdb 56 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRSTK 99 usage_00175.pdb 54 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRSTK 97 usage_00176.pdb 54 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRST- 96 usage_00177.pdb 54 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRST- 96 usage_00178.pdb 56 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRST- 98 usage_00179.pdb 54 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRST- 96 usage_00208.pdb 47 RTLGVGKRLIAQAKQWAKEGNPGI---LETQN-N--NVAACKFYEKCG 88 usage_00220.pdb 51 RHKSIGSKLLKFAEDKCSECHQ-HNVFVYLPA-V--DDLTKQWFIAHG 94 usage_00241.pdb 56 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRSTK 99 usage_00242.pdb 56 QRQGIGKKLITATNQFYTEKGF-EEVFVQADK-V--DDYALDFYRSTK 99 g Gk l v fy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################