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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:52:28 2021
# Report_file: c_1068_22.html
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#====================================
# Aligned_structures: 12
#   1: usage_00017.pdb
#   2: usage_00018.pdb
#   3: usage_00019.pdb
#   4: usage_00020.pdb
#   5: usage_00021.pdb
#   6: usage_00022.pdb
#   7: usage_00023.pdb
#   8: usage_00273.pdb
#   9: usage_00276.pdb
#  10: usage_00277.pdb
#  11: usage_00278.pdb
#  12: usage_00518.pdb
#
# Length:         60
# Identity:       56/ 60 ( 93.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     56/ 60 ( 93.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            3/ 60 (  5.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00018.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRN-   58
usage_00019.pdb         1  GDRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   60
usage_00020.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00021.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRR--   57
usage_00022.pdb         1  GDRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRR--   58
usage_00023.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00273.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00276.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVESQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00277.pdb         1  GDRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRN-   59
usage_00278.pdb         1  -DRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNA   59
usage_00518.pdb         1  GDRAWVKLISSHDKLVSDLVRRQSGHVVESQGDGFMVAFARPEQAVRCGIELQRALRRNA   60
                            DRAWVKLISSHDKLVSDLVRRQSGHVV SQGDGFMVAFARPEQAVRCGIELQRALRR  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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