################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:11 2021 # Report_file: c_1484_594.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00596.pdb # 2: usage_02680.pdb # 3: usage_03848.pdb # 4: usage_04173.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 71 ( 1.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 71 ( 74.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00596.pdb 1 TIGEMIAISNQF-LR----------------ELSTLLKQGAGTKGSN----KKKLLSMLS 39 usage_02680.pdb 1 --TIQELDRFANQ--ILSYGAELDADHPGFK----------DP-VYR----ARRKQFADI 41 usage_03848.pdb 1 --KISDLDHCA--NRVLMYG-SELDA--D-------HPGFKDN-VYR----KRRKYFADL 41 usage_04173.pdb 1 ----QDEADEL--TR----------------RFVALMDAG-------EPADSEGAMDAAE 31 a usage_00596.pdb 40 DYWYLSC---- 46 usage_02680.pdb 42 AY------NY- 45 usage_03848.pdb 42 AM--------- 43 usage_04173.pdb 32 DHRQG-IARNH 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################