################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:23 2021 # Report_file: c_0457_25.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00049.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00169.pdb # 5: usage_00257.pdb # 6: usage_00274.pdb # 7: usage_00354.pdb # 8: usage_00355.pdb # 9: usage_00362.pdb # 10: usage_00407.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 79 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 79 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 GSIRIYSMRFAPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKN-PFGLVPVLENSQ 58 usage_00072.pdb 1 -SIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKN-PFGLVPVLENSQ 57 usage_00073.pdb 1 GSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKN-PFGLVPVLENSQ 58 usage_00169.pdb 1 --LRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLID-KPEWLTTKS-AFAKVPAIEIAE 56 usage_00257.pdb 1 -GHVLYSNLFCPFVDRARLASELRKFQ-HIVEVPLHP-QPEWYKYIN-PRDTVPALFTPS 56 usage_00274.pdb 1 GSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKN-PFGLVPVLENSQ 58 usage_00354.pdb 1 GLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYTKH-PFGHIPVLETSQ 58 usage_00355.pdb 1 GLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYTKH-PFGHIPVLETSQ 58 usage_00362.pdb 1 --LTIYHIPGCPFSERVEIL-ELKGLR-KDVEIDISKPRPDWLLAKTGGTTALPLLDVEN 56 usage_00407.pdb 1 GLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYTKH-PFGHIPVLETSQ 58 Y cP R l k i l PeW k P l usage_00049.pdb 59 GQLIYESAITCEYLDE--- 74 usage_00072.pdb 58 GQLIYESAITCEYLDE--- 73 usage_00073.pdb 59 GQLIYESAITCEYLDE--- 74 usage_00169.pdb 57 DVTIYESLVTVEYLDEV-- 73 usage_00257.pdb 57 GEAVHESQLIVQYIDC--- 72 usage_00274.pdb 59 GQLIYESAITCEYLDE--- 74 usage_00354.pdb 59 SQLIYESVIACEYLDDAY- 76 usage_00355.pdb 59 SQLIYESVIACEYLDD--- 74 usage_00362.pdb 57 GESLKES-VILRYLEQRYP 74 usage_00407.pdb 59 SQLIYESVIACEYLDD--- 74 ES Yld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################