################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:49 2021 # Report_file: c_0569_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00007.pdb # 2: usage_00081.pdb # 3: usage_00161.pdb # 4: usage_00163.pdb # 5: usage_00164.pdb # 6: usage_00205.pdb # # Length: 80 # Identity: 56/ 80 ( 70.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 80 ( 81.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 80 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 RAEVEV------ETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIV 54 usage_00081.pdb 1 RAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIV 60 usage_00161.pdb 1 RAEVEV----DRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG-RIV 55 usage_00163.pdb 1 RAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIV 60 usage_00164.pdb 1 RAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIV 60 usage_00205.pdb 1 RASIDV----GKETIIVHELPYQVNKARLIEKMAELVKDKRLEGISALRDESDKDGMRMV 56 RAeveV ETIIVHEiPYQVNKARLIEKiAELVKeKRvEGISALRDESDKDG RiV usage_00007.pdb 55 IE------GEVVLNNLYSQ- 67 usage_00081.pdb 61 IEVKRDAVGEVVLNNLYSQ- 79 usage_00161.pdb 56 IEVKRDAVGEVVLNNLYSQ- 74 usage_00163.pdb 61 IEVKRDAVGEVVLNNLYS-- 78 usage_00164.pdb 61 IEVKRDAVGEVVLNNLYSQT 80 usage_00205.pdb 57 IEIKRGEVGEVVLNNLYKL- 75 IE GEVVLNNLYs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################