################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:23 2021 # Report_file: c_0843_17.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00032.pdb # 2: usage_00183.pdb # 3: usage_00185.pdb # 4: usage_00186.pdb # 5: usage_00187.pdb # 6: usage_00188.pdb # 7: usage_00318.pdb # 8: usage_00387.pdb # 9: usage_00527.pdb # 10: usage_00528.pdb # 11: usage_00568.pdb # # Length: 95 # Identity: 28/ 95 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 95 ( 52.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 95 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 --PEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATA 58 usage_00183.pdb 1 ------------SPLHNVRPGVSYPST-VTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 47 usage_00185.pdb 1 -SE-AFDYLKGYSPLHNVRPGVSYPST-VTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 57 usage_00186.pdb 1 -SE-AFDYLKGYSPLHNVRPGVSYPST-VTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 57 usage_00187.pdb 1 ------------SPLHNVRPGVSYPSTMVTTADHNDRVVPAHSFKFAATLQADNAGPHPQ 48 usage_00188.pdb 1 ------------SPLHNVRPGVSYPST-VTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 47 usage_00318.pdb 1 --EADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPH 58 usage_00387.pdb 1 S-EAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 59 usage_00527.pdb 1 ------------SPLHNVRPGVSYPSTMVTTADHNDRVVPAHSFKFAATLQADNAGPHPQ 48 usage_00528.pdb 1 S-EAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHNDRVVPAHSFKFAATLQADNAGPHPQ 59 usage_00568.pdb 1 S-EAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 59 SP HnVRpgV YP vttADh DRVvP HsfKf A lQ gP p usage_00032.pdb 59 LLRIEANAGHGGADQVAKAIESSVDLYSFLFQ--- 90 usage_00183.pdb 48 LIRIET-------TPVAKLIEQSADIYAFTLYEG- 74 usage_00185.pdb 58 LIRIET--------PVAKLIEQSADIYAFTLYEG- 83 usage_00186.pdb 58 LIRIET--------PVAKLIEQSADIYAFTLYEG- 83 usage_00187.pdb 49 LIRIET-------TPVAKLIEQSADIYAFTLYEMG 76 usage_00188.pdb 48 LIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEG- 81 usage_00318.pdb 59 LIRIE---------PIDKQIEETADVQAFLAHF-- 82 usage_00387.pdb 60 LIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 94 usage_00527.pdb 49 LIRIET-------NPVAKLIEQSADIYAFTLYEMG 76 usage_00528.pdb 60 LIRIET--------PVAKLIEQSADIYAFTLYEMG 86 usage_00568.pdb 60 LIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 94 LiRIE pvaK IE saD yaF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################