################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:15:40 2021 # Report_file: c_0275_15.html ################################################################################################ #==================================== # Aligned_structures: 31 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00042.pdb # 6: usage_00047.pdb # 7: usage_00060.pdb # 8: usage_00078.pdb # 9: usage_00084.pdb # 10: usage_00102.pdb # 11: usage_00103.pdb # 12: usage_00117.pdb # 13: usage_00119.pdb # 14: usage_00132.pdb # 15: usage_00143.pdb # 16: usage_00144.pdb # 17: usage_00148.pdb # 18: usage_00157.pdb # 19: usage_00165.pdb # 20: usage_00166.pdb # 21: usage_00167.pdb # 22: usage_00173.pdb # 23: usage_00180.pdb # 24: usage_00183.pdb # 25: usage_00185.pdb # 26: usage_00186.pdb # 27: usage_00189.pdb # 28: usage_00206.pdb # 29: usage_00207.pdb # 30: usage_00212.pdb # 31: usage_00225.pdb # # Length: 88 # Identity: 13/ 88 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 88 ( 30.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 88 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --QLVGSGGGLIQPGGSLRLSCAASDFSVSE-YYMTWVRQAPGKGLEWVAVLYKD-G--S 54 usage_00034.pdb 1 --QLVGSGGGLIQPGGSLRLSCAASDFSVSE-YYMTWVRQAPGKGLEWVAVLYKD-G--S 54 usage_00035.pdb 1 --QLVGSGGGLIQPGGSLRLSCAASDFSVSE-YYMTWVRQAPGKGLEWVAVLYKD-G--S 54 usage_00036.pdb 1 --QLVGSGGGLIQPGGSLRLSCAASDFSVSE-YYMTWVRQAPGKGLEWVAVLYKD-G--S 54 usage_00042.pdb 1 --QLVESGGGLVQPGRSLRLSCAASGFTFND-YAMHWVRQAPGKGLEWVSGISWD-S-SS 55 usage_00047.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFTFTS-TGISWVRQAPGKGLEWVGRIYPT-N-GS 57 usage_00060.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWN-G-GD 55 usage_00078.pdb 1 --QLVESGGGVVQPGKSPRLSCAASGS---S-YAVHWVRQAPGKGLEWVTLISYD-G-AN 52 usage_00084.pdb 1 --QLVESGGGVVQPGRSLRLSCAASGFTFSS-YGMHWVRQAPGKGLEWVAVMWYD-G-SN 55 usage_00102.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSR-YALSWVRQTADKRLEWVASIVSG-G--N 55 usage_00103.pdb 1 -VMLVESGGVLVKPGGSLKLSCAASGFTFSR-YAMSWVRQTPEKRLEWVATISSG-G-SY 56 usage_00117.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFSS-SSIHWVRQAPGKGLEWVASIYSY-S-GY 55 usage_00119.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSR-YALSWVRQTADKRLEWVASIVSG-G--N 55 usage_00132.pdb 1 -VQLVESGGGVVQPGGSLRLSCAASGFTFNK-FWMNWVRQAPGKGLEWVADIQVD-G-SE 56 usage_00143.pdb 1 --QLVQSGGGVVKPGASSRLSCAASGFTFTD-YYMSWIRQAPGKGLEWVAYITKD-G-SE 55 usage_00144.pdb 1 -VQLLESGGGLVQPGGSLRVSCTNSGFTFSN-YAMSWVRQAPGKGLEWVSAIS------G 52 usage_00148.pdb 1 --QLVESGGGVVRPGGSLRLSCAASGFIFEN-YGLTWVRQVPGKGLHWVSGMNWN-G-GD 55 usage_00157.pdb 1 -VQLVESGGGVVQPGKSVRLSCVVSDFPFSK-YPMYWVRQAPGKGLEWVAAISGD-A-WH 56 usage_00165.pdb 1 --QLLESGGGLVKPGGSLRLSCAASGFTLIN-YRMNWVRQAPGKGLEWVSSISSS-S-SY 55 usage_00166.pdb 1 --QLLESGGGLVKPGGSLRLSCAASGFTLIN-YRMNWVRQAPGKGLEWVSSISSS-S-SY 55 usage_00167.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSS-TWIHWVRQAPGKGLEWVARISPY-Y-YY 55 usage_00173.pdb 1 -VQLVESGGGLVKPGGSLRLSCAASGFTFSN-YAMSWVRQTPEKRLEWVATISRS-G-SY 56 usage_00180.pdb 1 --QLVESGGGVVQPGRSLRLSCAASGFTFSS-YGMHWVRQAPGKGLEWVAVMYYD-G-SN 55 usage_00183.pdb 1 --K-LQESGAVVQPGGSLRLSCAASGFTGSD-YDMSWIRQAPGKGLEWVSGILGG-S-ER 54 usage_00185.pdb 1 ----VESGGGLIQPGGSLRLSCAVSGFTVSS-KYMTWVRQAPGKGLEWVSVIYGG-G--S 52 usage_00186.pdb 1 ----VESGGGLIQPGGSLRLSCAVSGFTVSS-KYMTWVRQAPGKGLEWVSVIYGG-G--S 52 usage_00189.pdb 1 -VQLVESGGGLVQPGGSLKLSCAASGFTLSG-SNVHWVRQASGKGLEWVGRIKRNAESDA 58 usage_00206.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWN-G-GD 55 usage_00207.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWN-G-GD 55 usage_00212.pdb 1 --QLVESGGGLVQAGGSLRLSCAASGS-FFMSNVMAWYRQAPGKARELIAAIRGG-D-MS 55 usage_00225.pdb 1 -VQLVESGGGLVKPGGSLRLSCAASGFTFSN-AWMSWVRQAPGKGLEWVGRIKSKTDGGT 58 sgG pG S lSC S W RQ K lewv usage_00033.pdb 55 QFYAPSVKGRFIVSRDNSKNSLYLQMN- 81 usage_00034.pdb 55 QFYAPSVKGRFIVSRDNSKNSLYLQMN- 81 usage_00035.pdb 55 QFYAPSVKGRFIVSRDNSKNSLYLQMN- 81 usage_00036.pdb 55 QFYAPSVKGRFIVSRDNSKNSLYLQMN- 81 usage_00042.pdb 56 IGYADSVKGRFTISRDNAKNSLYLQMN- 82 usage_00047.pdb 58 TNYADSVKGRFTISADTSKNTAYLQMNS 85 usage_00060.pdb 56 SRYGDSVKGRFTISRDNSNNFVYLQMNS 83 usage_00078.pdb 53 QYYADSVKGRFTISRDNSKNTVYLQMNS 80 usage_00084.pdb 56 KDYVDSVKGRFTISRDNSKNTLYLQMN- 82 usage_00102.pdb 56 TYYSGSVKGRFTISRDIARNILYLQMS- 82 usage_00103.pdb 57 SYYPDSVKGRFTISRDNVKNTLYLQMS- 83 usage_00117.pdb 56 TYYADSVKGRFTISADTSKNTAYLQMNS 83 usage_00119.pdb 56 TYYSGSVKGRFTISRDIARNILYLQMSS 83 usage_00132.pdb 57 KNYVDSVKGRFTISRDNGKNSLYLQMN- 83 usage_00143.pdb 56 KKYADSLQHRFAVSRDNANNLVFLQLNT 83 usage_00144.pdb 53 TYYADSVKGRFTISRDNSKNTMYLQMNS 80 usage_00148.pdb 56 TRYADSVRGRFSMSRDNSNNIAYLQMKN 83 usage_00157.pdb 57 VVYSNSVQGRFLVSRDNVKNTLYLEMNS 84 usage_00165.pdb 56 IHYADSVKGRFTISRDNAENSLYLQMNS 83 usage_00166.pdb 56 IHYADSVKGRFTISRDNAENSLYLQMN- 82 usage_00167.pdb 56 SDYADSVKGRFTISADTSKNTAYLQMNS 83 usage_00173.pdb 57 SYFPDSVQGRFTISRDNAKNSLYLQMNS 84 usage_00180.pdb 56 KDYVDSVKGRFTISRDNSKNTLYLQMN- 82 usage_00183.pdb 55 SYYRDSVKGRSTISRDNSRKTLYLEMNS 82 usage_00185.pdb 53 TYYADSVVGRFTISRDNSKNTLYLQMNS 80 usage_00186.pdb 53 TYYADSVVGRFTISRDNSKNTLYLQMNS 80 usage_00189.pdb 59 TAYAASMRGRLTISRDDSKNTAFLQMN- 85 usage_00206.pdb 56 SRYGDSVKGRFTISRDNSNNFVYLQMN- 82 usage_00207.pdb 56 SRYGDSVKGRFTISRDNSNNFVYLQMN- 82 usage_00212.pdb 56 TVYDDSVKGRFTITRDDDKNILYLQMN- 82 usage_00225.pdb 59 TDYAAPVKGRFTISRDDSKNTLYLQMNS 86 y s gR s D n L m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################