################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:21 2021 # Report_file: c_1114_36.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00137.pdb # 2: usage_00296.pdb # 3: usage_00297.pdb # 4: usage_00298.pdb # 5: usage_00299.pdb # 6: usage_00386.pdb # 7: usage_00410.pdb # # Length: 92 # Identity: 12/ 92 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 92 ( 69.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 92 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00137.pdb 1 SAEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRL 58 usage_00296.pdb 1 SAEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL----------- 47 usage_00297.pdb 1 SAEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLE---------- 48 usage_00298.pdb 1 SAEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL----------- 47 usage_00299.pdb 1 SAEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL----------- 47 usage_00386.pdb 1 -AEQSHVLNMLSIE--ALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL----------- 46 usage_00410.pdb 1 TQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQT--------- 51 aeqshvLnmlsie altvgQitekqGvnkaavsRrvkkLlnaeLvkl usage_00137.pdb 59 KIIKLSNKGKKYIKERKA---IMSHIASDMTS 87 usage_00296.pdb 48 -IIKLSNKGKKYIKERKA---IM--------- 66 usage_00297.pdb 49 KIIKLSNKGKKYIKERKA---IMSHIASDMT- 76 usage_00298.pdb 48 -IIKLSNKGKKYIKERKA---IMSHIASDM-- 73 usage_00299.pdb 48 KIIKLSNKGKKYIKERKA---IMSHIASDMT- 75 usage_00386.pdb 47 -IIKLSNKGKKYIKERKA---IM--------- 65 usage_00410.pdb 52 KRIKLTEKAEPLIAEEEVIHK-TRGEILA--- 79 iIKLsnKgkkyIkErka m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################