################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:34 2021 # Report_file: c_0892_19.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00049.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00197.pdb # 7: usage_00198.pdb # 8: usage_00199.pdb # 9: usage_00200.pdb # 10: usage_00201.pdb # 11: usage_00202.pdb # # Length: 95 # Identity: 67/ 95 ( 70.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 95 ( 70.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 95 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 55 usage_00029.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 55 usage_00049.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 55 usage_00069.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKD-KAVIDEIFQG 59 usage_00070.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNI-KAV--IDEIFQG 57 usage_00197.pdb 1 -KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 54 usage_00198.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 55 usage_00199.pdb 1 TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 55 usage_00200.pdb 1 -KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 54 usage_00201.pdb 1 -KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 54 usage_00202.pdb 1 -KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK----NIK-DKAVIDE 54 KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK usage_00028.pdb 56 IFQGLDANQDEQVDFQEFISLVAIALKAAHYHTH- 89 usage_00029.pdb 56 IFQGLDANQDEQVDFQEFISLVAIALKAAHYHTHK 90 usage_00049.pdb 56 IFQGLDANQDEQVDFQEFISLVAIALKAAH----- 85 usage_00069.pdb 60 LDA----NQDEQVDFQEFISLVAIALKAAHYHT-- 88 usage_00070.pdb 58 LDA----NQDEQVDFQEFISLVAIALKAAH----- 83 usage_00197.pdb 55 IFQGLDANQDEQVDFQEFISLVAIALKAAHYH--- 86 usage_00198.pdb 56 IFQGLDANQDEQVDFQEFISLVAIALKAAHYHT-- 88 usage_00199.pdb 56 IFQGLDANQDEQVDFQEFISLVAIALKAAHYH--- 87 usage_00200.pdb 55 IFQGLDANQDEQVDFQEFISLVAIALKAAHYH--- 86 usage_00201.pdb 55 IFQGLDANQDEQVDFQEFISLVAIALKAAHYH--- 86 usage_00202.pdb 55 IFQGLDANQDEQVDFQEFISLVAIALKAAHY---- 85 NQDEQVDFQEFISLVAIALKAAH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################