################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:28 2021 # Report_file: c_0675_84.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00124.pdb # 2: usage_00376.pdb # 3: usage_00409.pdb # 4: usage_00420.pdb # 5: usage_00552.pdb # # Length: 82 # Identity: 1/ 82 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 82 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 82 ( 69.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00124.pdb 1 -NFMIYPI-SKDLKNG--N-SELVRVYSKSK---EI--QY---IKIYTKKIINPGTTEEY 47 usage_00376.pdb 1 -NFELLKVL---GTGAY---GKVFLVRKISG-----HD---TG--------------KLY 31 usage_00409.pdb 1 PVFKAVSFK---SQV-VA--GTNYFIKVHVG----DE--DFVH--------------LRV 34 usage_00420.pdb 1 -NFMIYPI-SKDLKNG--N-SELVRVYSKSK---EI--QY---IKIYTKKIINPGTTEEY 47 usage_00552.pdb 1 -TFLIWPI-YPKIEAN--EKATAVWLQNTGKTDA---------VQIRVFKWNQ-DG--LK 44 F usage_00124.pdb 48 E----------VD--------- 50 usage_00376.pdb 32 AMKVL-------KKATIVQK-- 44 usage_00409.pdb 35 FQSLPHENKPLTLSNYQTN--- 53 usage_00420.pdb 48 E----------VD-------IP 52 usage_00552.pdb 45 D----------NY-------SE 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################