################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:14 2021 # Report_file: c_1405_96.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00896.pdb # 2: usage_00897.pdb # 3: usage_01433.pdb # 4: usage_01434.pdb # 5: usage_01467.pdb # 6: usage_01468.pdb # 7: usage_01483.pdb # 8: usage_01484.pdb # 9: usage_01485.pdb # 10: usage_01486.pdb # 11: usage_01518.pdb # 12: usage_01519.pdb # 13: usage_01520.pdb # 14: usage_01735.pdb # 15: usage_01860.pdb # 16: usage_01861.pdb # # Length: 42 # Identity: 35/ 42 ( 83.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 42 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 42 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00896.pdb 1 CQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 42 usage_00897.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01433.pdb 1 CQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 42 usage_01434.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01467.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKL---- 35 usage_01468.pdb 1 CQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKL---- 38 usage_01483.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01484.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLE--- 36 usage_01485.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01486.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01518.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01519.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01520.pdb 1 CQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 42 usage_01735.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 usage_01860.pdb 1 CQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKL---- 38 usage_01861.pdb 1 ---RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKV 39 RAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################