################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:28 2021 # Report_file: c_1131_44.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00037.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00096.pdb # 5: usage_00097.pdb # 6: usage_00231.pdb # 7: usage_00260.pdb # 8: usage_00497.pdb # 9: usage_00522.pdb # 10: usage_00542.pdb # 11: usage_00553.pdb # # Length: 81 # Identity: 58/ 81 ( 71.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 81 ( 71.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 81 ( 27.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 PEDRHIDRLAKR--PGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 54 usage_00076.pdb 1 -EDRHIDRLAKR--PGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 53 usage_00077.pdb 1 PEDRHIDRLAKR--PGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 54 usage_00096.pdb 1 PEDRHIDRLAK------RLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSGTAV 53 usage_00097.pdb 1 --DRHIDRLAKR----ERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSGTAV 53 usage_00231.pdb 1 PEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 56 usage_00260.pdb 1 -EDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQL------ 53 usage_00497.pdb 1 -EDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 55 usage_00522.pdb 1 -EDRHIDRLAKR---GERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSGT-- 53 usage_00542.pdb 1 PEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 56 usage_00553.pdb 1 PEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ-LSG--- 56 DRHIDRLAK RLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQ usage_00037.pdb 55 PQSNAGPRPHIGDTLFTLFRA 75 usage_00076.pdb 54 PQSNAGPRPHIGDTLFTLFRA 74 usage_00077.pdb 55 PQSNAGPRPHIGDTLFTLFRA 75 usage_00096.pdb 54 PQSNAGPRPHIGDTLFTLFRA 74 usage_00097.pdb 54 PQSNAGPRPHIGDTLFTLFRA 74 usage_00231.pdb 57 -----PR-PHIGDTLFTLFRA 71 usage_00260.pdb 54 ------PRPHIGDTLFTLFRA 68 usage_00497.pdb 56 PQSNAGPRPHIGDTLFTLFRA 76 usage_00522.pdb 54 PQSNAGPRPHIGDTLFTLFRA 74 usage_00542.pdb 57 ------PRPHIGDTLFTLFRA 71 usage_00553.pdb 57 -----PR-PHIGDTLFTLFRA 71 PHIGDTLFTLFRA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################