################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:58 2021 # Report_file: c_0993_62.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00062.pdb # 3: usage_00176.pdb # 4: usage_00207.pdb # 5: usage_00274.pdb # 6: usage_00275.pdb # 7: usage_00511.pdb # 8: usage_00557.pdb # 9: usage_00647.pdb # 10: usage_00689.pdb # # Length: 54 # Identity: 10/ 54 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 54 ( 64.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 54 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00062.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00176.pdb 1 ----AELDGKPVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00207.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00274.pdb 1 ----AELDGKPVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00275.pdb 1 TSWRAELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 43 usage_00511.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 usage_00557.pdb 1 --VLYKV--DHILFADHGMGIPSALIMLHEVTKLL-HYAGCKDVLFIRLG---- 45 usage_00647.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGV-------RTFLRIGTTGA 43 usage_00689.pdb 1 ----AELDGKAVIVCSTGIGGPSTSIAVEELAQLGI-------RTFLRIG---- 39 ael k vivcstGiGgPStsIaveElaqLg rtFlRiG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################