################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:29 2021 # Report_file: c_0709_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00013.pdb # 2: usage_00104.pdb # 3: usage_00105.pdb # 4: usage_00270.pdb # 5: usage_00271.pdb # 6: usage_00272.pdb # 7: usage_00273.pdb # 8: usage_00274.pdb # # Length: 80 # Identity: 25/ 80 ( 31.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 80 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 80 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -TRPWAG--GPLRAGVSSFGIGGTNAHAILQEAPEQGPTEPSPR------AEQLLVLSAR 51 usage_00104.pdb 1 GNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPE------------HDGRPVPLVVSAR 48 usage_00105.pdb 1 GNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPER--------TTAHDGRPVPLVVSAR 52 usage_00270.pdb 1 QARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEAD-------------GPVPLVLSGR 47 usage_00271.pdb 1 QARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEAD-------------GPVPLVLSGR 47 usage_00272.pdb 1 --RSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEAD-------------GPVPLVLSGR 45 usage_00273.pdb 1 QARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEAD-------------GPVPLVLSGR 47 usage_00274.pdb 1 QARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEAD-------------GPVPLVLSGR 47 W r rRA VS FGIsGTNAHvIveEAPE pvpLV S R usage_00013.pdb 52 TRTALDTLTDDLADHLEAN- 70 usage_00104.pdb 49 STAALRAQAAQIAELLER-- 66 usage_00105.pdb 53 STAALRAQAAQIAELLER-- 70 usage_00270.pdb 48 DEQA-RAQAGRLADHLAR-- 64 usage_00271.pdb 48 DEQA-RAQAGRLADHLARE- 65 usage_00272.pdb 46 DEQA-RAQAGRLADHLAR-- 62 usage_00273.pdb 48 DEQA-RAQAGRLADHLARE- 65 usage_00274.pdb 48 DEQA-RAQAGRLADHLAREP 66 A raqa A L r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################