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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:06:13 2021
# Report_file: c_0611_56.html
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#====================================
# Aligned_structures: 4
#   1: usage_00127.pdb
#   2: usage_00219.pdb
#   3: usage_00220.pdb
#   4: usage_00581.pdb
#
# Length:        101
# Identity:       43/101 ( 42.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     43/101 ( 42.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/101 ( 13.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00127.pdb         1  TPTDCVYLGVNALMR-PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL   59
usage_00219.pdb         1  TPADCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA   60
usage_00220.pdb         1  TPADCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA   60
usage_00581.pdb         1  TPTDCVYLGVNALM--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL   58
                           TP DCV LG         PD V SGIN GPNLG D  YSGTV  AMEGR LG P  A S 

usage_00127.pdb        60  NGY--QHYDTAAAVTCALLRGLSREPLR--TGRILNVNVP-   95
usage_00219.pdb        61  FGRENIMFEEIAKVCVDIVKKVLNEGIP--EDTYLNVNIP-   98
usage_00220.pdb        61  FGRENIMFEEIAKVCVDIVKKVLNEGIP--EDTYLNVNIPN   99
usage_00581.pdb        59  NGY--QHYDTAAAVTCALLRG-------LSTGRILNVNVP-   89
                            G         A V                    LNVN P 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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