################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:28 2021 # Report_file: c_0019_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00049.pdb # 2: usage_00050.pdb # 3: usage_00051.pdb # 4: usage_00093.pdb # 5: usage_00094.pdb # 6: usage_00095.pdb # 7: usage_00096.pdb # # Length: 131 # Identity: 5/131 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/131 ( 16.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/131 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -GQWIKAGGTGRNTTVTANGRQIVQAGGTA-SDTVIRDGGG-Q-SLN-GLAV--NTTLDN 53 usage_00050.pdb 1 -------SGMARDTLIYAGGDQTVH--GEA-HNTRLEG-GNQYVHNG-GTAT--ETLINR 46 usage_00051.pdb 1 SSFTLNAGDTATDTTVNGGLF-TAR-GGTLAGTTTLNNGAI-L-TLSGKTVNNDTLTIRE 56 usage_00093.pdb 1 GKQYVSSGGSATSTTINIGGVQHVSSGGSA-TSSTINSGGHQHVSSG-GSAT--NTTVNN 56 usage_00094.pdb 1 GRQYVRDGGSATDTVLNNTGRQFVSSGGSA-AKTTINSGGG-Y-LYG-GSAT--GTSIYN 54 usage_00095.pdb 1 GKQYVSSGGSATSTTINIGGVQHVSSGGSA-TSSTINSGGHQHVSSG-GSAT--NTTVNN 56 usage_00096.pdb 1 GRQYVRDGGSATDTVLNNTGRQFVSSGGSA-AKTTINSGGG-Y-LYG-GSAT--GTSIYN 54 gg a T g v G a g g a t usage_00049.pdb 54 RGEQWVHGGGKAA--GTIINQDGYQTIKHG-GLATGTIVNTG-AESSG-QMVGGT-A-ES 106 usage_00050.pdb 47 DGWQVIKEGGTAA--HTTINQKGKLQVNAG-GKASDVTQNTGG----ALVTSTAA-T-VT 97 usage_00051.pdb 57 GDALLQG-GSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEG-----TLTLNDST-VTTD 109 usage_00093.pdb 57 GGRQTVFSGGSA---GTIINSGGDQYVISG-GSATSASVTSGA----RQFVSSGGIV-KA 107 usage_00094.pdb 55 GGRQYVSSGGSAT--NTTVYSGGRQHVYID-GNVTETTITSGG----LQVEAGGS-A-SK 105 usage_00095.pdb 57 GGRQTVFSGGSA---GTIINSGGDQYVISG-GSATSASVTSGA----RQFVSSGGIV-KA 107 usage_00096.pdb 55 GGRQYVSSGGSAT--NTTVYSGGRQHVYID-GNVTETTITSGG----LQVEAGGS-A-SK 105 g q Gg a t G v g G usage_00049.pdb 107 TTIN------K 111 usage_00050.pdb 98 GTNRLGAFSV- 107 usage_00051.pdb 110 VIAQ------R 114 usage_00093.pdb 108 TSVN------S 112 usage_00094.pdb 106 VIQN------S 110 usage_00095.pdb 108 TSVN------S 112 usage_00096.pdb 106 VIQN------S 110 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################