################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:06:35 2021 # Report_file: c_1312_19.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00023.pdb # 11: usage_00467.pdb # 12: usage_00471.pdb # 13: usage_00472.pdb # 14: usage_00474.pdb # 15: usage_00503.pdb # 16: usage_00511.pdb # 17: usage_00512.pdb # 18: usage_00513.pdb # 19: usage_00543.pdb # 20: usage_00576.pdb # 21: usage_00580.pdb # 22: usage_01014.pdb # 23: usage_01015.pdb # 24: usage_01021.pdb # # Length: 45 # Identity: 29/ 45 ( 64.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 45 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 45 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLSL 42 usage_00003.pdb 1 ---QTGLDLLDILQQVK-S-QGEAVGELPRGKLYSLGKGRWMLS- 39 usage_00006.pdb 1 ---QTGLDLLDILQQVKGG--GEAVGELPRGKLYSLGKGRWMLS- 39 usage_00011.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00012.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00013.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00014.pdb 1 ----TGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLSL 41 usage_00015.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00016.pdb 1 ---QTGLDLLDILQQVK----GEAVGELPRGKLYSLGKGRWMLS- 37 usage_00023.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00467.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00471.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00472.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00474.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00503.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00511.pdb 1 QPVQTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 44 usage_00512.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00513.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00543.pdb 1 QPVQTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 44 usage_00576.pdb 1 QPVQTGLDLLDILQQVK---QGEAVGELPRGKLYSLGKGRWMLS- 41 usage_00580.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 41 usage_01014.pdb 1 ---QTGLDLLEILRQEKGGSRGEEVGELSRGKLYSLGNGRWMLT- 41 usage_01015.pdb 1 QPVQTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLS- 44 usage_01021.pdb 1 ---QTGLDLLDILQQVKGGSQGEAVGELPRGKLYSLGKGRWMLSL 42 TGLDLLdILqQvK GEaVGELpRGKLYSLGkGRWMLs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################