################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:55 2021 # Report_file: c_0727_2.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00052.pdb # 4: usage_00082.pdb # 5: usage_00176.pdb # 6: usage_00184.pdb # 7: usage_00214.pdb # 8: usage_00232.pdb # 9: usage_00236.pdb # 10: usage_00251.pdb # 11: usage_00277.pdb # 12: usage_00285.pdb # 13: usage_00360.pdb # 14: usage_00365.pdb # 15: usage_00392.pdb # # Length: 99 # Identity: 1/ 99 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 99 ( 14.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 99 ( 59.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00004.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00052.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00082.pdb 1 AERNVLIFDLGGGTFDVSILTTED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00176.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00184.pdb 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFE----VLATNGDTHLGGEDFDSRLINYLV 56 usage_00214.pdb 1 -ERNVLIFDLGGGTFDVSILTIDD----GIFE----VKATAGDTHLGGEDFDNRLVNHFV 51 usage_00232.pdb 1 GERNVLIFDLGGGTFDVSLLTIED----GIFE----VKATAGDTHLGGEDFDNRLVEFCV 52 usage_00236.pdb 1 ----ILVYDLGGGTFDVSILELGD----GVFE----VKATAGDNHLGGDDFDQVIIDYLV 48 usage_00251.pdb 1 --YDVVFCDLGGGTDDLVLLPA------GLKPPKSRDS-FVSNTAPF-------LAHLEK 44 usage_00277.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00285.pdb 1 -PRIVAFVDIGHSSYTCSI-AFKK----GQLK----VLGTACDKHFGGRDFDLAITEHFA 50 usage_00360.pdb 1 AERNVLIFSLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00365.pdb 1 AERNVLIFDLGGGTFKVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 usage_00392.pdb 1 AERNVLIFDLGGGTFDVSILTIED----GIFE----VKSTAGDTHLGGEDFDNRMVNHFI 52 dlGggt s g v t d h g usage_00003.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00004.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00052.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00082.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRT---- 83 usage_00176.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00184.pdb 57 EEFKKDQGI-DLRNDPLAMQR---LKEAAEKAKIEL-S- 89 usage_00214.pdb 52 EEFKRKHKK-DISQNKRAVRR---LRTACERAKRTL--- 83 usage_00232.pdb 53 QDFKRKNRGMDLTT-NARALR---RLRTQCERAKRTLS- 86 usage_00236.pdb 49 NQFKQEHGI-DLSKDKMALQR---LKDAAEKAKKEL-SG 82 usage_00251.pdb 45 LRK-------------EKLLEHFDSVRELEKFIYSN-I- 68 usage_00277.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00285.pdb 51 DEFKTKYKI-DIRENP----------------------- 65 usage_00360.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00365.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL--- 84 usage_00392.pdb 53 AEFKRKHKK-DISENKRAVRR---LRTACERAKRTL-S- 85 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################