################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:34 2021 # Report_file: c_0715_45.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00284.pdb # 2: usage_00285.pdb # 3: usage_00369.pdb # 4: usage_00488.pdb # # Length: 77 # Identity: 26/ 77 ( 33.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 77 ( 41.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 77 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00284.pdb 1 VMGLAWTAMGGSTLFVETSLRRPQ--DGSLEVTGQLGEVMKESARIAYTFARAFLMQHAP 58 usage_00285.pdb 1 VMGLAWTAMGGSTLFVETSLRRPQK-DGSLEVTGQLGEVMKESARIAYTFARAFLMQHAP 59 usage_00369.pdb 1 ----AWTEVGGDLLTIETACVP---GKGKLTYTGSLGEVMQESIQAALTVVRARA-EKLG 52 usage_00488.pdb 1 ----AWTPVGGTLLTIEVAAVP---GSGKLSLTGQLGEVMKESAQAALTYLRAHT-QDYG 52 AWT GG L Et G L TGqLGEVMkESa A T RA q usage_00284.pdb 59 A-NDYLVTSHIHLHV-P 73 usage_00285.pdb 60 A-NDYLVTSHIHLHV-P 74 usage_00369.pdb 53 INPDFYEKRDIHVHVPE 69 usage_00488.pdb 53 LPEDFYNKVDLHVHV-- 67 D iH HV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################