################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:12 2021 # Report_file: c_1200_134.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00322.pdb # 2: usage_01881.pdb # 3: usage_02115.pdb # 4: usage_02117.pdb # 5: usage_02233.pdb # 6: usage_02372.pdb # 7: usage_02373.pdb # 8: usage_02374.pdb # 9: usage_02807.pdb # 10: usage_03666.pdb # 11: usage_04160.pdb # 12: usage_04745.pdb # 13: usage_04951.pdb # 14: usage_05205.pdb # 15: usage_05249.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 36 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 36 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_01881.pdb 1 SVKRSIWKFDCHATVDD-KPVCSA-------EIICA 28 usage_02115.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02117.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02233.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02372.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02373.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02374.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_02807.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_03666.pdb 1 -----VRMMLT----DSVSSVQIEDAASQSAAYVVM 27 usage_04160.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_04745.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_04951.pdb 1 ---EEIEMNFV----DSTSPCQINPLDISGYLYIVM 29 usage_05205.pdb 1 ---ENVRMMLT----DSVSSVQIEDAASQSAAYVVM 29 usage_05249.pdb 1 ---AEIRVSFT----GAMRPFLIRTPNDETIVQLIL 29 d i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################