################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:49:07 2021 # Report_file: c_0070_10.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00053.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # 7: usage_00253.pdb # 8: usage_00254.pdb # 9: usage_00255.pdb # 10: usage_00294.pdb # 11: usage_00295.pdb # 12: usage_00296.pdb # 13: usage_00297.pdb # 14: usage_00298.pdb # 15: usage_00299.pdb # 16: usage_00300.pdb # 17: usage_00301.pdb # # Length: 236 # Identity: 80/236 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 210/236 ( 89.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/236 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----G--CGAAACRVD 54 usage_00218.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 53 usage_00219.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----GGP-NHAAFQAD 55 usage_00220.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--------NHAAFQAD 51 usage_00221.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGS---NHAAFQAD 57 usage_00222.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--------NHAAFQAD 52 usage_00253.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 53 usage_00254.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--------NHAAFQAD 52 usage_00255.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--------NHAAFQAD 52 usage_00294.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--PPR--GNHAAFQAD 56 usage_00295.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 53 usage_00296.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 52 usage_00297.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 52 usage_00298.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--PRG---NHAAFQAD 54 usage_00299.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--------NHAAFQAD 51 usage_00300.pdb 1 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----R--GNHAAFQAD 54 usage_00301.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL----G---NHAAFQAD 52 lAlVTGAGsGIGrAVsvRLAgEGatVaacDlDraAAqetvrll nhAAfqaD usage_00053.pdb 55 VSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 113 usage_00218.pdb 54 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 113 usage_00219.pdb 56 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 115 usage_00220.pdb 52 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 111 usage_00221.pdb 58 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 117 usage_00222.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 usage_00253.pdb 54 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 113 usage_00254.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 usage_00255.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 usage_00294.pdb 57 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 116 usage_00295.pdb 54 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 113 usage_00296.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 usage_00297.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 usage_00298.pdb 55 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 114 usage_00299.pdb 52 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 111 usage_00300.pdb 55 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 114 usage_00301.pdb 53 VSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 112 VSearaarclleqvqAcF rppsvvVscAGitqdefLlhmsedDwDkVIAvNLkGtfLvT usage_00053.pdb 114 KHAAPRMI-E-RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRS 171 usage_00218.pdb 114 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 172 usage_00219.pdb 116 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 174 usage_00220.pdb 112 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 170 usage_00221.pdb 118 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 176 usage_00222.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00253.pdb 114 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 172 usage_00254.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00255.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00294.pdb 117 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 175 usage_00295.pdb 114 QAAAQALVSNGC-RGSIINIS-IVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00296.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00297.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 usage_00298.pdb 115 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 173 usage_00299.pdb 112 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 170 usage_00300.pdb 115 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 173 usage_00301.pdb 113 QAAAQALVSNGC-RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 171 qaAAqalv n c rGsIiNiS ivGkVgnvGqtnYaaSKAGvIgLtqtaArELgrhGIRc usage_00053.pdb 172 NTLLPAFVDTPMQQTAMAMFDGALG-GARSMIARLQ--GRMAAPEEMAGIVVFLLS 224 usage_00218.pdb 173 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 220 usage_00219.pdb 175 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 222 usage_00220.pdb 171 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 218 usage_00221.pdb 177 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLA- 223 usage_00222.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLA- 218 usage_00253.pdb 173 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 220 usage_00254.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 usage_00255.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 usage_00294.pdb 176 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 223 usage_00295.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 usage_00296.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 usage_00297.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 usage_00298.pdb 174 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 221 usage_00299.pdb 171 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 218 usage_00300.pdb 174 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 221 usage_00301.pdb 172 NSVLPGFIATPMTQKV-P-------QKVVDKITEMIPMGHLGDPEDVADVVAFLAS 219 NsvLPgFiaTPMtQkv p kvvdkItemi GhlgdPEdvAdvVaFLa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################