################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:47 2021 # Report_file: c_0545_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00389.pdb # 2: usage_00391.pdb # 3: usage_00393.pdb # 4: usage_00395.pdb # # Length: 191 # Identity: 134/191 ( 70.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 134/191 ( 70.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/191 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00389.pdb 1 TVENPFILFLYIKKFQSPLKKHIDNDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL 60 usage_00391.pdb 1 ---NPFILFLYIKKFQSPLKKHIDNDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL 57 usage_00393.pdb 1 ------------------------NDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL 36 usage_00395.pdb 1 -------------------------DDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL 35 DDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL usage_00389.pdb 61 QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE 120 usage_00391.pdb 58 QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE 117 usage_00393.pdb 37 QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE 96 usage_00395.pdb 36 QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE 95 QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE usage_00389.pdb 121 SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNS-------------------- 160 usage_00391.pdb 118 SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQN--------------------- 156 usage_00393.pdb 97 SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNSSKTDSIENVFDYDNTVSTFA 156 usage_00395.pdb 96 SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNSSKTDSIENVFDYDNTVSTFA 155 SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQN usage_00389.pdb ----------- usage_00391.pdb ----------- usage_00393.pdb 157 TSLNSFYKEYN 167 usage_00395.pdb 156 TSLNSFYKEYN 166 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################