################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:27 2021 # Report_file: c_0273_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00020.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # # Length: 194 # Identity: 72/194 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 144/194 ( 74.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/194 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 FEVIKQQK---EIIEHGIELFNKKPKRGIQFLQEQG-LG-TSVEDIAQFLHQEERLDSTQ 55 usage_00020.pdb 1 -----------TALSECIAIFNNKPKKAIPVLIKKGFLKDDSPISIAKWLLETEGLDMAA 49 usage_00024.pdb 1 -------------IEHGIELFNKKPKRGIQFLQEQG-LG-TSVEDIAQFLHQEERLDSTQ 45 usage_00025.pdb 1 --------QQKEIIEQGIDLFNKKPKRGIQYLQEQGMLG-TTPEDIAQFLHQEERLDSTQ 51 usage_00026.pdb 1 ------------IIEQGIDLFNKKPKRGIQYLQEQGMLG-TTPEDIAQFLHQEERLDSTQ 47 ie gI lFNkKPKrgIq LqeqG Lg t edIAqfLhqeErLDstq usage_00001.pdb 56 VGDFLGDSARFNKEV-YAYVDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDRL-EKFAAR 113 usage_00020.pdb 50 VGDYLGEGDDKNIAIMHAFVDEFDFTGMSIVDALRSFLQSFRLPGEGQKIDRFMLKFAER 109 usage_00024.pdb 46 VGDFLGDSARFNKEV-YAYVDQL---EKEFVSALRTFLEGFRLPGEAQKIDRL-EKFAAR 100 usage_00025.pdb 52 VGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAAR 111 usage_00026.pdb 48 VGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAAR 107 VG fLGd fNkev yAyVDq k fVsALR FLegFRLPGEaQKIDRl eKFAaR usage_00001.pdb 114 YIEC----TLFASADTAYVLAYSII-LTTDLHSPQVKN-KTKEQYIK-NRGINDSKDLPE 166 usage_00020.pdb 110 FVDQNP--GVFSKADTAYVLSYSLIMLNTDLHSSQIKNKMSLQEFLENNEGIDNGRDLPR 167 usage_00024.pdb 101 YIEC-----LFASADTAYVLAYSII-LTTDL--PQVKN-KTKEQYIK-NRGINDSKDLPE 150 usage_00025.pdb 112 YLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPE 171 usage_00026.pdb 108 YLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPE 167 y ec lFasADTAYVLaYSiI LtTDL pQvKN tkeqyik NrGIndskDLPe usage_00001.pdb 167 EYLSSIYEEIEG-- 178 usage_00020.pdb 168 DFLEGLFNEIANNE 181 usage_00024.pdb 151 EYLSSIYEEIEGK- 163 usage_00025.pdb 172 EYLSAIYNEIAGKK 185 usage_00026.pdb 168 EYLSAIYNEIAGKK 181 eyLs iy EI g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################