################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:54 2021 # Report_file: c_1138_2.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00055.pdb # 2: usage_00073.pdb # 3: usage_00075.pdb # 4: usage_00516.pdb # 5: usage_00553.pdb # 6: usage_00554.pdb # 7: usage_00555.pdb # 8: usage_00556.pdb # 9: usage_00557.pdb # 10: usage_00558.pdb # 11: usage_00559.pdb # 12: usage_00560.pdb # 13: usage_00561.pdb # 14: usage_00562.pdb # 15: usage_00563.pdb # # Length: 161 # Identity: 61/161 ( 37.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 121/161 ( 75.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/161 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00073.pdb 1 -LFYVINFITPCVLISFLASLAFYLPAESGE-KMSTAISVLLAQAVFLLLTSQRLPETAL 58 usage_00075.pdb 1 -LFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIFLFLIAQKVPETSL 59 usage_00516.pdb 1 --FYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 57 usage_00553.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00554.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00555.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00556.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00557.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00558.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00559.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00560.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00561.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00562.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 usage_00563.pdb 1 PLFYVINFITPCVLISFLAALAFYLPAESGE-KMSTAICVLLAQAVFLLLTSQRLPETAL 59 FYvINfItPCVLISfLa LafyLPAesGe KmstaI VLLAQavFLlLtsQrlPETaL usage_00055.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00073.pdb 59 AVPLIGKYLMFIMSLVTGVIVNCGIVLNFHFR---------------------------- 90 usage_00075.pdb 60 NVPLIGKYLIFVMFVSMLIVMNCVIVLNVSLR---------------------------- 91 usage_00516.pdb 58 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 117 usage_00553.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00554.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00555.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00556.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00557.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00558.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00559.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00560.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00561.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00562.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 usage_00563.pdb 60 AVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTNYIVKQIKEKNAYDEEV 119 aVPLIGKYLmFiMslvtgvvvNCgIVLNfhfR usage_00055.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00073.pdb 91 -----TGQTIDRLSMFIITPVMVLGTIFIFVMGNFNHPPAK 126 usage_00075.pdb 92 -----TGKVIDKACFWIALLLFSIGTLAIFLTGHFNQVPEF 127 usage_00516.pdb 118 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 158 usage_00553.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00554.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00555.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00556.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00557.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00558.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00559.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00560.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00561.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00562.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 usage_00563.pdb 120 GNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAK 160 GqtIDrlsmfIitpvmvlGTifIFvmGnFN pPak #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################