################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:54 2021 # Report_file: c_1208_253.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00557.pdb # 2: usage_00558.pdb # 3: usage_00835.pdb # 4: usage_00837.pdb # 5: usage_01162.pdb # 6: usage_01245.pdb # 7: usage_01273.pdb # 8: usage_01348.pdb # 9: usage_01691.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 58 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 58 ( 70.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00557.pdb 1 N----VVVTRTLSK-SYS---LAG-----RIGLAI-----A-R---PE-VIAALDKIR 35 usage_00558.pdb 1 N----VVVTRTLSK-SYS---LAG-----RIGLAI-----A-R---PE-VIAALDKI- 34 usage_00835.pdb 1 -------KVYVTG---------E-VA---NSGKQAITNIPL-T---VM-DAINAA--- 30 usage_00837.pdb 1 -------VLSGDY---------E----G-VPVEIAC----A-P---AE-ARGALDLL- 27 usage_01162.pdb 1 -------AYVAPEKF------S----SKVLTWLGK-----MPLFKNTE-VVQKHTENI 35 usage_01245.pdb 1 --------IVAVGS-LRREEKMLN---D-VDLLIIV----P-E---KK-LLKH----- 31 usage_01273.pdb 1 -NVVVTGLTLVCS--S------AP-----GPLELD-----L-T-----GDLESFKKQ- 32 usage_01348.pdb 1 R----VIVAGTLSK-VLG---T-----GFRIGWII-----A-E---GE-ILKKVLMQK 35 usage_01691.pdb 1 -----LVVTRTMSK-AFA---FAG----GRLGYLI-----A-T---PA-VIDAMLLV- 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################