################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:36 2021 # Report_file: c_0473_41.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00046.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00057.pdb # 5: usage_00059.pdb # 6: usage_00177.pdb # 7: usage_00178.pdb # 8: usage_00179.pdb # 9: usage_00235.pdb # 10: usage_00390.pdb # # Length: 110 # Identity: 81/110 ( 73.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/110 ( 73.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/110 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 --PLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP-NTAGL----GKAELRRL 53 usage_00049.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP----------GKAELRRL 50 usage_00050.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP-NTAGLRSLQGKAELRRL 59 usage_00057.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP-NTAGL----GKAELRRL 55 usage_00059.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP-NTAGL----GKAELRRL 55 usage_00177.pdb 1 --PLGINLGKNKTSEDAAADYAEGVRTLGPLADYLVVNVSSPQ---------GKTELRHL 49 usage_00178.pdb 1 GLPLGINLGKNKTSEDAAADYAEGVRTLGPLADYLVVNVSS-Q---------GKTELRHL 50 usage_00179.pdb 1 GLPLGINLGKNKTSEDAAADYAEGVRTLGPLADYLVVNVSS-Q---------GKTELRHL 50 usage_00235.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP----------GKAELRRL 50 usage_00390.pdb 1 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSP-NT-------GKAELRRL 52 PLG NLGKNKTS DAA DYAEGVR LGPLADYLVVNVSS GK ELR L usage_00046.pdb 54 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 103 usage_00049.pdb 51 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 100 usage_00050.pdb 60 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 109 usage_00057.pdb 56 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 105 usage_00059.pdb 56 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 105 usage_00177.pdb 50 LSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVARELGIDGLIVT 99 usage_00178.pdb 51 LSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVARELGIDGLIVT 100 usage_00179.pdb 51 LSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVARELGIDGLIVT 100 usage_00235.pdb 51 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 100 usage_00390.pdb 53 LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 102 L KVLQERD L PAVLVKIAPDLT QDKEDIASV ELGIDGLIVT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################