################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:26 2021 # Report_file: c_1434_133.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00003.pdb # 2: usage_00212.pdb # 3: usage_00228.pdb # 4: usage_00631.pdb # 5: usage_01561.pdb # 6: usage_01983.pdb # 7: usage_02281.pdb # 8: usage_02496.pdb # 9: usage_02545.pdb # 10: usage_03109.pdb # # Length: 75 # Identity: 47/ 75 ( 62.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 75 ( 68.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 75 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL------S------YKDSTLI 48 usage_00212.pdb 1 HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEES------YKDSTLI 54 usage_00228.pdb 1 HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL-------DTLGE---DSTLI 50 usage_00631.pdb 1 HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEES------YKDSTLI 54 usage_01561.pdb 1 HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELD-EE--S------YKDSTLI 51 usage_01983.pdb 1 HPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDS------YKDSTLI 54 usage_02281.pdb 1 HPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEES------YKDSTLI 54 usage_02496.pdb 1 HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES------YKDSTLI 54 usage_02545.pdb 1 HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES------YKDSTLI 54 usage_03109.pdb 1 HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL-------DTL--GYKDSTLI 51 HPIRLGLALNfSVFYYEIlNsP AC LAK AFD AIaEL DSTLI usage_00003.pdb 49 MQLLRDNLTLWTSDM 63 usage_00212.pdb 55 MQLLRDNLTLW---- 65 usage_00228.pdb 51 MQLLRDNLTLWTS-- 63 usage_00631.pdb 55 MQLLRDNLTLWT--- 66 usage_01561.pdb 52 MQLLRDNLTLWT--- 63 usage_01983.pdb 55 MQLLRDNLTLWTS-- 67 usage_02281.pdb 55 MQLLRDNLTLWT--- 66 usage_02496.pdb 55 MQLLRDNLTLWTS-- 67 usage_02545.pdb 55 MQLLRDNLTLWTS-- 67 usage_03109.pdb 52 MQLLRDNLTLWT--- 63 MQLLRDNLTLW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################