################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:51 2021 # Report_file: c_0989_30.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00035.pdb # 5: usage_00036.pdb # 6: usage_00073.pdb # 7: usage_00074.pdb # 8: usage_00370.pdb # 9: usage_01087.pdb # 10: usage_01092.pdb # 11: usage_01093.pdb # # Length: 62 # Identity: 5/ 62 ( 8.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 62 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 62 ( 53.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------NANYIKNQLLGPDENA--KTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 46 usage_00002.pdb 1 --------NYIKNQ--------LLKTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 38 usage_00003.pdb 1 ------NANYIKNQ--------LLKTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 40 usage_00035.pdb 1 ------NANIIMPE--------F-KSYIATQGCLQ-NTVNDFWRMVFQEN----S-RVIV 39 usage_00036.pdb 1 ------NANYIKNQLLGPDENA--KTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 46 usage_00073.pdb 1 ------NANYIKNQLLGPDENA--KTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 46 usage_00074.pdb 1 ------NANYIKNQLLGPDENA--KTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 46 usage_00370.pdb 1 ------NANYIKNQLLGPDENA--KTYIASQGCLE-ATVNDFWQMAWQEN----S-RVIV 46 usage_01087.pdb 1 ALFQED--------------------G-TQVGLLSGGCLETDLTIKAQKVWQEQLPRTVV 39 usage_01092.pdb 1 ------NANIIMPE-------K--KSYIATQGCLQ-NTVNDFWRMVFQEN----S-RVIV 39 usage_01093.pdb 1 ------NANIIMPE-------K--KSYIATQGCLQ-NTVNDFWRMVFQEN----S-RVIV 39 y a qGcL tvndfw m Qen s RviV usage_00001.pdb 47 MT 48 usage_00002.pdb 39 MT 40 usage_00003.pdb 41 MT 42 usage_00035.pdb 40 MT 41 usage_00036.pdb 47 MT 48 usage_00073.pdb 47 MT 48 usage_00074.pdb 47 MT 48 usage_00370.pdb 47 MT 48 usage_01087.pdb 40 YD 41 usage_01092.pdb 40 MT 41 usage_01093.pdb 40 MT 41 mt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################