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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:00:58 2021
# Report_file: c_0135_6.html
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#====================================
# Aligned_structures: 4
#   1: usage_00017.pdb
#   2: usage_00018.pdb
#   3: usage_00019.pdb
#   4: usage_00048.pdb
#
# Length:        164
# Identity:       40/164 ( 24.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    140/164 ( 85.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           24/164 ( 14.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  ALVKSLRESGATMMPIVPSLASMLTTLI-RRDPEGAPTLRMFTNSAAALPQVTIDALRSA   59
usage_00018.pdb         1  ALVKSLRESGATMMPIVPSLASMLTTLI-RRDPEGAPTLRMFTNSAAALPQVTIDALRSA   59
usage_00019.pdb         1  -LVKSLRESGATMMPIVPSLASMLTTLI-RRDPEGAPTLRMFTNSAAALPQVTIDALRSA   58
usage_00048.pdb         1  -LLGLIEKYKVSIAPVVPPVMMSIAKSPDLD-KHDLSSLRMIKS-------ELEDTVRAK   51
                            LvkslresgatmmPiVPslasmlttli rr pegaptLRMftn       vtiDalRsa

usage_00017.pdb        60  FPGAQVVRMYGQTECKRI-SIMPPHLE----HERPDSVGLPLPGTTIEILDE-DGTLLPP  113
usage_00018.pdb        60  FPGAQVVRMYGQTECKRI-SIMPPHLE----HERPDSVGLPLPGTTIEIL-----TLLPP  109
usage_00019.pdb        59  FPGAQVVRMYGQTECKRI-SIMPPHLE----HERPDSVGLPLPGTTIEIL-----TLLPP  108
usage_00048.pdb        52  FPQARLGQGYGMTEAGPVLAMCLA-FAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPR  110
                           FPgAqvvrmYGqTEckri simpp le    herPdsvGlplpgttieIl     tlLPp

usage_00017.pdb       114  GEPGEITVTGPHVMAGYWRAPEITARAYRRAMRLHTGDYGHLDE  157
usage_00018.pdb       110  GEPGEITVTGPHVMAGYWRAPEITARAY---MRLHTGDYGHLDE  150
usage_00019.pdb       109  GEPGEITVTGPHVMAGYWRAPEITARAY---MRLHTGDYGHLDE  149
usage_00048.pdb       111  NQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDD  154
                           gePGEItvtGphvMaGYwraPEiTaRay   mrLHTGDyGhlDe


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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