################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:53 2021 # Report_file: c_0238_8.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00096.pdb # 2: usage_00097.pdb # 3: usage_00098.pdb # 4: usage_00099.pdb # 5: usage_00100.pdb # 6: usage_00101.pdb # 7: usage_00102.pdb # 8: usage_00103.pdb # 9: usage_00110.pdb # 10: usage_00111.pdb # 11: usage_00112.pdb # 12: usage_00113.pdb # # Length: 142 # Identity: 118/142 ( 83.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/142 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/142 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALGQEADKG-LSGCGIVYCRTREACEQLAIELSCR 59 usage_00097.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALGQEA-G--LSGCGIVYCRTREACEQLAIELSCR 57 usage_00098.pdb 1 NLFYDVQFKELISDPYGNLKDFCLK-A-----------CGIVYCRTREACEQLAIELSCR 48 usage_00099.pdb 1 NLFYDVQFKELISDPYGNLKDFCLK-A-----------CGIVYCRTREACEQLAIELSCR 48 usage_00100.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG------QLSGCGIVYCRTREACEQLAIELSCR 54 usage_00101.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG---------GCGIVYCRTREACEQLAIELSCR 51 usage_00102.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG-------QSGCGIVYCRTREACEQLAIELSCR 53 usage_00103.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG-------LSGCGIVYCRTREACEQLAIELSCR 53 usage_00110.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG---------GCGIVYCRTREACEQLAIELSCR 51 usage_00111.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG------QLSGCGIVYCRTREACEQLAIELSCR 54 usage_00112.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG-------QSGCGIVYCRTREACEQLAIELSCR 53 usage_00113.pdb 1 NLFYDVQFKELISDPYGNLKDFCLKALG--------SGCGIVYCRTREACEQLAIELSCR 52 NLFYDVQFKELISDPYGNLKDFCLK CGIVYCRTREACEQLAIELSCR usage_00096.pdb 60 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATIS-----DKANVRFVAHWNIAKSMAG 114 usage_00097.pdb 58 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF---VDKANVRFVAHWNIAKSMAG 114 usage_00098.pdb 49 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF---GDKANVRFVAHWNIAKSMAG 105 usage_00099.pdb 49 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATIS----FDKANVRFVAHWNIAKSMAG 104 usage_00100.pdb 55 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF---GDKANVRFVAHWNIAKSMAG 111 usage_00101.pdb 52 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF----DKANVRFVAHWNIAKSMAG 107 usage_00102.pdb 54 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATIS-----DKANVRFVAHWNIAKSMAG 108 usage_00103.pdb 54 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAG 113 usage_00110.pdb 52 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF----DKANVRFVAHWNIAKSMAG 107 usage_00111.pdb 55 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISF----DKANVRFVAHWNIAKSMAG 110 usage_00112.pdb 54 GVNAKAYHA------RTLVQNDWMEEKVPVIVATIS-----DKANVRFVAHWNIAKSMAG 102 usage_00113.pdb 53 GVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFG--VDKANVRFVAHWNIAKSMAG 110 GVNAKAYHA RTLVQNDWMEEKVPVIVATIS DKANVRFVAHWNIAKSMAG usage_00096.pdb 115 YYQESGRAGRDGKPSWCRLYYS 136 usage_00097.pdb 115 YYQESGRAGRDGKPSWCRLYYS 136 usage_00098.pdb 106 YYQESGRAGRDGKPSWCRLYYS 127 usage_00099.pdb 105 YYQESGRAGRDGKPSWCRLYYS 126 usage_00100.pdb 112 YYQESGRAGRDGKPSWCRLYYS 133 usage_00101.pdb 108 YYQESGRAGRDGKPSWCRLYYS 129 usage_00102.pdb 109 YYQESGRAGRDGKPSWCRLYYS 130 usage_00103.pdb 114 YYQESGRAGRDGKPSWCRLYYS 135 usage_00110.pdb 108 YYQESGRAGRDGKPSWCRLYYS 129 usage_00111.pdb 111 YYQESGRAGRDGKPSWCRLYYS 132 usage_00112.pdb 103 YYQESGRAGRDGKPSWCRLYYS 124 usage_00113.pdb 111 YYQESGRAGRDGKPSWCRLYYS 132 YYQESGRAGRDGKPSWCRLYYS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################