################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:38 2021 # Report_file: c_0006_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00097.pdb # 2: usage_00098.pdb # 3: usage_00099.pdb # 4: usage_00109.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00112.pdb # 8: usage_00113.pdb # 9: usage_00114.pdb # # Length: 147 # Identity: 85/147 ( 57.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/147 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/147 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 ---------------------ARIEPGALIREKVEIGDQAVI--GAILNIGAVVGAGT-I 36 usage_00098.pdb 1 ---------------------ARIEPGALIREKVEIGDQAVI--GAILNIGAVVGAGT-I 36 usage_00099.pdb 1 ---------------------ARIEPGALIREKVEIGDQAVI--GAILNIGAVVGAGT-I 36 usage_00109.pdb 1 ---------------------ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 39 usage_00110.pdb 1 ---------------------ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 39 usage_00111.pdb 1 ---------------------ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 39 usage_00112.pdb 1 ---------------------ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 39 usage_00113.pdb 1 YVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 60 usage_00114.pdb 1 ---------------------ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMI 39 ARIEPGA IR VEIGD AVI A NIGAV G G I usage_00097.pdb 37 D-GAVLGGRATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVVIGANAVVLEGVRVGEGA 95 usage_00098.pdb 37 D-GAVLGGRATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVVIGANAVVLEGVRVGEGA 95 usage_00099.pdb 37 D-GAVLGGRATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVVIGANAVVLEGVRVGEGA 95 usage_00109.pdb 40 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 99 usage_00110.pdb 40 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 99 usage_00111.pdb 40 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 99 usage_00112.pdb 40 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 99 usage_00113.pdb 61 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 120 usage_00114.pdb 40 DMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 99 D AVLGGRATVGK CH GAG VLAGVIEPPSA PV E VVIGAN VVLEGV VG GA usage_00097.pdb 96 VVAAGAVVVEDVPAHTVVAGVPAKV-- 120 usage_00098.pdb 96 VVAAGAVVVEDVPAHTVVAGVPAKV-- 120 usage_00099.pdb 96 VVAAGAVVVEDVPAHTVVAGVPAKV-- 120 usage_00109.pdb 100 VVAAGAVVTEDVPPYTVVAGTPARVIK 126 usage_00110.pdb 100 VVAAGAVVTEDVPPYTVVAGTPARVIK 126 usage_00111.pdb 100 VVAAGAVVTEDVPPYTVVAGTPARVIK 126 usage_00112.pdb 100 VVAAGAVVTEDVPPYTVVAGTPARVIK 126 usage_00113.pdb 121 VVAAGAVVTEDVPP------------- 134 usage_00114.pdb 100 VVAAGAVVTEDVPPYTVVAGTPARV-- 124 VVAAGAVV EDVP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################