################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:15 2021 # Report_file: c_1212_188.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00114.pdb # 2: usage_00181.pdb # 3: usage_00344.pdb # 4: usage_00345.pdb # 5: usage_00346.pdb # 6: usage_00425.pdb # 7: usage_00589.pdb # 8: usage_00923.pdb # 9: usage_01071.pdb # 10: usage_01352.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 54 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 54 ( 75.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 ------------HQSSFYLVGPD-GKV---LKDYNGVENTPYDDIISDVKSAST 38 usage_00181.pdb 1 ---------------KVTFKTPK-GEK---TIDVE-A-DKYLLDAAEEAG---- 29 usage_00344.pdb 1 ------------ASYKVTLKTPD-GDN---VITVP-D-DEYILDVAEEEG---- 32 usage_00345.pdb 1 ------------ASYKVTLKTPD-GDN---VITVP-D-DEYILDVAEEEG---- 32 usage_00346.pdb 1 ------------ASYKVTLKTPD-GDN---VITVP-D-DEYILDVAEEEG---- 32 usage_00425.pdb 1 GFTVQD-------GQLVVALP-D-KST---G---L-A-N--PGQFA-------- 27 usage_00589.pdb 1 ------------ATYKVTLVRPDGSET---TIDVP-E-DEYILDVAEEQG---- 33 usage_00923.pdb 1 ------------ASYKVTLKTPD-GDN---VITVP-D-DEYILDVAEEQG---- 32 usage_01071.pdb 1 ------------LAKTVIIKD------GRLAVVLP-A-SDHITFKLKEAI---- 30 usage_01352.pdb 1 LAVKLGTITPDGADVYSFQ-----E-----EEPVL-D-P-HLAKHLAHFG---- 37 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################