################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:52 2021 # Report_file: c_0268_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00016.pdb # 9: usage_00017.pdb # # Length: 123 # Identity: 27/123 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/123 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/123 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --HEWFGHQ-ALVNER-DSQQVALERWLTAFDG-LAIAPTDTLTIDAFLNDFNRHLANAY 55 usage_00002.pdb 1 --------Q-ALVNER-DSQQVALERWLTAFDG-LAIAPTDTLTIDAFLNDFNRHLANAY 49 usage_00010.pdb 1 ------TNE----ELA-AAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEW-VADW 48 usage_00011.pdb 1 HEW-LMAHQQLGPRLI-DSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLF 58 usage_00012.pdb 1 HEW-LMAHQQLGPRLI-DSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLF 58 usage_00013.pdb 1 HEW-LMAHQQLGPRLI-DSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLF 58 usage_00014.pdb 1 HEW-LMAHQQLGPRLI-DSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLF 58 usage_00016.pdb 1 HEW-FQAHQQISPTLA-NSQRVALQVWLDEYPNQLGIALTDCI-TDAFLRDFDLAFANRY 57 usage_00017.pdb 1 HEW-FQAHQQISPT-LANSQRVALQVWLDEYPNQLGIALTDCI-TDAFLRDFDLAFANRY 57 q sq aL W L Ia tD dAFL df a usage_00001.pdb 56 DGVRHDSGCPFRWGDK-IAHYQQLGIDPTTKLFIFSDGLDFDQALELCEYFAGRVKISFG 114 usage_00002.pdb 50 DGVRHDSGCPFRWGDK-IAHYQQLGIDPTTKLFIFSDGLDFDQALELCEYFAGRVKISFG 108 usage_00010.pdb 49 TGFRPDSAPPIEGGEKIIEWWRKMGRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFG 108 usage_00011.pdb 59 DGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFG 118 usage_00012.pdb 59 DGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFG 118 usage_00013.pdb 59 DGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFG 118 usage_00014.pdb 59 DGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFG 118 usage_00016.pdb 58 QGLRHDSGDPIEWGEKAIAHYEKLGIDP-KKVLVFSDNLDLEKALFLYRHFYQRIKLVFG 116 usage_00017.pdb 58 QGLRHDSGDPIEWGEKAIAHYEKLGIDP-KKVLVFSDNLDLEKALFLYRHFYQRIKLVFG 116 G RhDSg P w K Iahy lGiDP K FSD LD al R FG usage_00001.pdb 115 IGT 117 usage_00002.pdb 109 IGT 111 usage_00010.pdb 109 W-- 109 usage_00011.pdb 119 IGT 121 usage_00012.pdb 119 IGT 121 usage_00013.pdb 119 IGT 121 usage_00014.pdb 119 IGT 121 usage_00016.pdb 117 IGT 119 usage_00017.pdb 117 IGT 119 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################