################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:52 2021 # Report_file: c_1409_251.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00010.pdb # 2: usage_01139.pdb # 3: usage_01365.pdb # 4: usage_01366.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 43 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 43 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --TPQKCIPHIIV-----RGLVRIRCVQEVERILYFMTRKG-- 34 usage_01139.pdb 1 RVRPLLAYAACE-ALGGKPE-QANGAACAVELIHAYSLVHDDL 41 usage_01365.pdb 1 -AASTLCLAACE-LVGGDRS-QAMAAAAAIHLVHAAAYVHEHL 40 usage_01366.pdb 1 --RPMLCIAACE-LVGGDES-TAMPAACAVEMIHTMSLMHDDL 39 p lc aace a aa ave ih h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################