################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:17 2021 # Report_file: c_0076_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00018.pdb # 4: usage_00020.pdb # 5: usage_00041.pdb # 6: usage_00043.pdb # 7: usage_00048.pdb # 8: usage_00049.pdb # 9: usage_00087.pdb # 10: usage_00094.pdb # 11: usage_00096.pdb # 12: usage_00105.pdb # 13: usage_00135.pdb # # Length: 220 # Identity: 36/220 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/220 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/220 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 60 usage_00003.pdb 1 SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 60 usage_00018.pdb 1 -------------------------TEARCKDISSALRVNPALAELNLRSNELGDVGVHC 35 usage_00020.pdb 1 SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 60 usage_00041.pdb 1 -------------------------TEARCKDISSALRVNPALAELNLRSNELGDVGVHC 35 usage_00043.pdb 1 -------------------------TEARCKDISSALRVNPALAELNLRSNELGDVGVHC 35 usage_00048.pdb 1 --------------------------DAYWQILFSVLKVTRNLKELDLSGNSLSHSAVKS 34 usage_00049.pdb 1 SDARWTELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHL 60 usage_00087.pdb 1 -------------------------SSSNCKDLSSIIHTNPSLKELKLNNNELGDAGIEY 35 usage_00094.pdb 1 -------------------------TEARCKDISSALRVNPALAELNLRSNELGDVGVHC 35 usage_00096.pdb 1 -------------------------TEARCKDISSALRVNPALAELNLRSNELGDVGVHC 35 usage_00105.pdb 1 -------------------------TKEACRAVANALKQAASLHELHLSNNNIGEEGAAE 35 usage_00135.pdb 1 -------------------------TEEHCKDIGSALRANPSLTELCLRTNELGDAGVHL 35 c s l L EL L N lg g usage_00001.pdb 61 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 120 usage_00003.pdb 61 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 120 usage_00018.pdb 36 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 95 usage_00020.pdb 61 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 120 usage_00041.pdb 36 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 95 usage_00043.pdb 36 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 95 usage_00048.pdb 35 LCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDLSFNVLTDAGAKHLCQ 94 usage_00049.pdb 61 VLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCE 120 usage_00087.pdb 36 LCKGLLTP--SLQKLWLQNCNLTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQ 93 usage_00094.pdb 36 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 95 usage_00096.pdb 36 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 95 usage_00105.pdb 36 LVEALLHPGSTLETLDLSNCNLTKEACREIARALKQATTLHELHLSNNNIGEEGAAELVE 95 usage_00135.pdb 36 VLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCE 95 L P L L nC LT C l L tL ELhls N lg aG Lc usage_00001.pdb 121 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 180 usage_00003.pdb 121 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 180 usage_00018.pdb 96 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 155 usage_00020.pdb 121 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 180 usage_00041.pdb 96 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 155 usage_00043.pdb 96 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 155 usage_00048.pdb 95 RLRQPS-KLQRLQLVSCGLTSDCCQDLASVLSASPSLKELDLQQNNLDDVGVRLLCEGLR 153 usage_00049.pdb 121 GLLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLA 180 usage_00087.pdb 94 GLMNPNCKLQKLQLEYCELTADIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLV 153 usage_00094.pdb 96 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 155 usage_00096.pdb 96 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 155 usage_00105.pdb 96 ALLHPGSTLETLDLSNCNLTKEACREIARALKQATTLHELHLSNNNIGEEGAAELVEALL 155 usage_00135.pdb 96 GLLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLA 155 L P L LqL C L c la L a kEL snN g L gL usage_00001.pdb 181 DSPCQLEALKL----------------------------- 191 usage_00003.pdb 181 DSPCQLEALKL----------------------------- 191 usage_00018.pdb 156 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL-AL 194 usage_00020.pdb 181 DSPCQLEALKL----------------------------- 191 usage_00041.pdb 156 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL-AL 194 usage_00043.pdb 156 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL-AL 194 usage_00048.pdb 154 HPACKLIRLGLDQTTLSDEMRQELRALEQEKPQLLIFS-- 191 usage_00049.pdb 181 DSACQLETLRL----------------------------- 191 usage_00087.pdb 154 EASCDLELLHLENCGITSDSCRDISAVLSSKPSLLDL-AV 192 usage_00094.pdb 156 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL-AL 194 usage_00096.pdb 156 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL-AL 194 usage_00105.pdb 156 HPGSTLETLDLSNCNLTKEACREIARALKQATSLHEL-HL 194 usage_00135.pdb 156 DSACQLETLRLENCGLTPANCKDLCGIVASQASLREL-DL 194 c Le L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################