################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:05 2021 # Report_file: c_0342_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00059.pdb # 2: usage_00093.pdb # 3: usage_00094.pdb # 4: usage_00095.pdb # 5: usage_00098.pdb # 6: usage_00115.pdb # 7: usage_00122.pdb # # Length: 115 # Identity: 42/115 ( 36.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/115 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/115 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 GVTKKILKEGNGVDKPVKGDDIVMNYRGCLYDSSKPSEHFMGRKFDSTE-ERGEFKTKIG 59 usage_00093.pdb 1 ------KSPGNGVDFPKKGDFVTIHYTGRLTD---------GSKFDSSVDRNEPFQTQIG 45 usage_00094.pdb 1 GVTKELKSPGNGVDFPKKGDFVTIHYTGRLTD---------GSKFDSSVDRNEPFQTQIG 51 usage_00095.pdb 1 GVTKELKSPGNGVDFPKKGDFVTIHYTGRLTD---------GSKFDSSVDRNEPFQTQIG 51 usage_00098.pdb 1 -------SPGNGVDFPKKGDFVTIHYTGRLTD---------GSKFDSSVDRNEPFQTQIG 44 usage_00115.pdb 1 ------ISPGDGATFPKTGDLVTIHYTGTLEN---------GQKFDSSVDRGSPFQCNIG 45 usage_00122.pdb 1 -------SPGDGKTFPKQGDLVTIHYTGTLEN---------GQKFDSSVDRGSPFQCNIG 44 spG G fPk GD vtihYtG L G KFDSsv r pFq IG usage_00059.pdb 60 IGVVIRGWDEAVLQMSLGEKSILTITDDYAYGARGFPGLIPPH-ATLVFEVELKG 113 usage_00093.pdb 46 TGRVIKGWDEGVPQMSLGEKAVLTITPDYGYGARGFPPVIPGN-STLIFEVELLG 99 usage_00094.pdb 52 TGRVIKGWDEGVPQMSLGEKAVLTITPDYGYGARGFPP-VIPGNSTLIFEVELLG 105 usage_00095.pdb 52 TGRVIKGWDEGVPQMSLGEKAVLTITPDYGYGARGFPGVIPGN-STLIFEVELLG 105 usage_00098.pdb 45 TGRVIKGWDEGVPQMSLGEKAVLTITPDYGYGARGFPPCIPGN-STLIFEVELLG 98 usage_00115.pdb 46 VGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPN-STLVFDVELLK 99 usage_00122.pdb 45 VGQVIKGWDAGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPN-ATLIFDVELLK 98 G VIkGWD g p S GEKa LTI Y YG RGFP ip TL F VELl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################