################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:28 2021 # Report_file: c_0881_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00090.pdb # 5: usage_00149.pdb # 6: usage_00209.pdb # 7: usage_00284.pdb # # Length: 97 # Identity: 22/ 97 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 97 ( 22.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 97 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 TVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSK 60 usage_00076.pdb 1 -SQYRKVLTTWMFCVCKDLRQDNNVFPLAVALLDELFLSTRIDRENYQSTAAVALHIAGK 59 usage_00077.pdb 1 ---------------------DNNVFPLAVALLDELFLSTRIDRENYQSTAAVALHIAGK 39 usage_00090.pdb 1 -VDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSK 59 usage_00149.pdb 1 TVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSK 60 usage_00209.pdb 1 TVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSK 60 usage_00284.pdb 1 TVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSK 60 D VFPL V LD Q A I K usage_00016.pdb 61 IRTVKPMTVSKLTYLSCDCFTNLELINQEKDILEALK 97 usage_00076.pdb 60 VRAYMPIKATQLAYLCGGATTADKLLTLEVKSLDTLS 96 usage_00077.pdb 40 VRAYMPIKATQLAYLCGGATTADKLLTLEVKSLDTLS 76 usage_00090.pdb 60 IRTVKPMTVSKLTYLS---FTNLELINQEKDILEALK 93 usage_00149.pdb 61 IRTVKPMTVSKLTYLS---FTNLELINQEKDILEALK 94 usage_00209.pdb 61 IRTVKPMTVSKLTYLS---FTNLELINQEKDILEALK 94 usage_00284.pdb 61 IRTVKPMTVSKLTYLS---FTNLELINQEKDILEALK 94 R P L YL T L E L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################