################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:58 2021 # Report_file: c_1262_175.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00959.pdb # 2: usage_01245.pdb # 3: usage_01249.pdb # 4: usage_01250.pdb # 5: usage_01251.pdb # 6: usage_02006.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 35 ( 17.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 35 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00959.pdb 1 MKVVAEVVDAD-MQALQKLAERLAEKGAVG----- 29 usage_01245.pdb 1 QLALL--SVSEKA-GLVEFARSLNALGLGLIA--S 30 usage_01249.pdb 1 KVVAE--VVDA-DQALQKLAERLAEKGAVGCLAK- 31 usage_01250.pdb 1 KVVAE--VVDA-DQALQKLAERLAEKGAVGCLAK- 31 usage_01251.pdb 1 KVVAE--VVDA-DQALQKLAERLAEKGAVG----- 27 usage_02006.pdb 1 -TVAE--QPIA-RWNTDGLARLRDKLSIPIMA--D 29 v l lA l g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################