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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:11:20 2021
# Report_file: c_0225_2.html
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#====================================
# Aligned_structures: 5
#   1: usage_00017.pdb
#   2: usage_00020.pdb
#   3: usage_00023.pdb
#   4: usage_00025.pdb
#   5: usage_00029.pdb
#
# Length:        142
# Identity:       33/142 ( 23.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    107/142 ( 75.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/142 ( 24.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  EIYHNGPRHVFVGLPS-IDALSALHPDHRALSNFHD-----MAINCFAGA---GRRWRSR   51
usage_00020.pdb         1  EIYHNGPRHVFVGLPS-IDALSALHPDHRALSNFHD-----MAINCFAGA---GRRWRSR   51
usage_00023.pdb         1  EIYHNGPRHVFVGLPS-IDALSALHPDHRALSNFHD-----MAINCFAGA---GRRWRSR   51
usage_00025.pdb         1  EIYHNGPRHVFVGLPS-IDALSALHPDHRALSNFHD-----MAINCFAGA---GRRWRSR   51
usage_00029.pdb         1  QVATTGHSKVI-PLKPEV-DIDALSPDLNALTAIS-KKIGCNGFFPFQIRPGKN-ETDGR   56
                           eiyhnGprhVf gLps i alsALhPDhrALsnfh      maincFaga   g rwrsR

usage_00017.pdb        52  MFSPAYGVVEDAATGSAAGPLAIHLARHGQIEF---GQPVEILQGVEIGRPSLMFAKAEG  108
usage_00020.pdb        52  MFSPAYGVVEDAATGSAAGPLAIHLARHGQIEF---GQPVEILQGVEIGRPSLMFAKAEG  108
usage_00023.pdb        52  MFSPAYGVVEDAATGSAAGPLAIHLARHGQIEF---GQPVEILQGVEIGRPSLMFAKAEG  108
usage_00025.pdb        52  MFSPAYGVVEDAATGSAAGPLAIHLARHGQIEF---GQPVEILQGVEIGRPSLMFAKAEG  108
usage_00029.pdb        57  -FSPAIGIVEDPVTGNANGP-GAWLVHHNVLPHDGNVLRVKGHQGRALGRDG-IEVTVTI  113
                            FSPAyGvVEDaaTGsAaGP aihLarHgqief   gqpVeilQGveiGRps mfakaeg

usage_00017.pdb       109  RA-EQLTRVEVSG---------  120
usage_00020.pdb       109  RA-EQLTRVEVSGN--------  121
usage_00023.pdb       109  RA-EQLTRVEVSGN--------  121
usage_00025.pdb       109  RA-EQLTR--------------  115
usage_00029.pdb       114  R-DNQPEKVTISGTAVILFHAE  134
                           R  eQltr              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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