################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:26 2021 # Report_file: c_0332_4.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00030.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # # Length: 123 # Identity: 109/123 ( 88.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/123 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/123 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 IAAHVISEASSKTTSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFC-SN 59 usage_00030.pdb 1 IAAHVISEAS---TSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFC-S- 55 usage_00039.pdb 1 IAAHVISEASSKTTSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFCS-- 58 usage_00040.pdb 1 IAAHVISEASSKTTSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFCS-- 58 IAAHVISEAS TSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFC usage_00001.pdb 60 REASSQ-APFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFV 118 usage_00030.pdb 56 ------NAPFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFV 109 usage_00039.pdb 59 --------PFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFV 110 usage_00040.pdb 59 --------PFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFV 110 PFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFV usage_00001.pdb 119 NVT 121 usage_00030.pdb 110 NVT 112 usage_00039.pdb 111 NVT 113 usage_00040.pdb 111 NVT 113 NVT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################