################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:33 2021 # Report_file: c_0447_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00029.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00048.pdb # 8: usage_00201.pdb # 9: usage_00202.pdb # # Length: 130 # Identity: 70/130 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/130 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/130 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 PHVNVGTIGHVDHGKTTLTAALTYVAAAENPN-----------VEVKDYGDIDKAPEERA 49 usage_00038.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGS---------A-GI--------------- 35 usage_00039.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGS---------ARGI--------------- 36 usage_00040.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGS---------A-GI--------------- 35 usage_00041.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGS------------I--------------- 33 usage_00042.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGS---------------------------- 32 usage_00048.pdb 1 ----VGTIGHVDHGKTTLTAAITTVLAKTYGG----------RGI--------------- 31 usage_00201.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFGSKIDSAPEEKARGI--------------- 45 usage_00202.pdb 1 PHVNVGTIGHVDHGKTTLTAALTRVCSEVFG-KIDSAPEEKA-GI--------------- 43 VGTIGHVDHGKTTLTAAlT V g usage_00029.pdb 50 RGITI-NTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTR 108 usage_00038.pdb 36 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 91 usage_00039.pdb 37 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 92 usage_00040.pdb 36 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 91 usage_00041.pdb 34 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 89 usage_00042.pdb 33 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 88 usage_00048.pdb 32 ----TINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTR 87 usage_00201.pdb 46 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 101 usage_00202.pdb 44 ----TINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTR 99 t NTaHVEY RHYaHVDCPGHADYvKNMITGAAQMDGAILV sAaDGPMPQTR usage_00029.pdb 109 EHILLARQVG 118 usage_00038.pdb 92 EHILLSRQ-- 99 usage_00039.pdb 93 EHILLSRQ-- 100 usage_00040.pdb 92 EHILLSRQ-- 99 usage_00041.pdb 90 EHILLSRQ-- 97 usage_00042.pdb 89 EHILLSRQV- 97 usage_00048.pdb 88 EHILLGRQ-- 95 usage_00201.pdb 102 EHILLSRQVG 111 usage_00202.pdb 100 EHILLSRQVG 109 EHILL RQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################