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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:53:14 2021
# Report_file: c_0270_42.html
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#====================================
# Aligned_structures: 2
#   1: usage_00131.pdb
#   2: usage_00239.pdb
#
# Length:        243
# Identity:      216/243 ( 88.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    216/243 ( 88.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/243 (  9.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00131.pdb         1  KKLKNIAHKNVLSFLNRINNRIALDHHNLGFLYTPSCTAEYRINGDVKALEATIKAADKL   60
usage_00239.pdb         1  KKLKNIAHKNVLSFLNRINNRIALDHHDLGFLYTPSCTAEYRINGDVKALEATIKAADKL   60
                           KKLKNIAHKNVLSFLNRINNRIALDHH LGFLYTPSCTAEYRINGDVKALEATIKAADKL

usage_00131.pdb        61  MERYQELIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHT-F---  116
usage_00239.pdb        61  MER-Y-LIINCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDP  118
                           MER   LII CLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHT     

usage_00131.pdb       117  -----------------SSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE  159
usage_00239.pdb       119  ETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE  178
                                            SSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE

usage_00131.pdb       160  DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE  219
usage_00239.pdb       179  DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE  238
                           DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE

usage_00131.pdb       220  QYS  222
usage_00239.pdb       239  QYS  241
                           QYS


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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