################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:20 2021 # Report_file: c_1442_1239.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_04331.pdb # 2: usage_06223.pdb # 3: usage_09038.pdb # 4: usage_11825.pdb # 5: usage_13857.pdb # 6: usage_13861.pdb # 7: usage_13953.pdb # 8: usage_17429.pdb # 9: usage_17866.pdb # 10: usage_18456.pdb # 11: usage_19871.pdb # # Length: 29 # Identity: 0/ 29 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 29 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 29 ( 51.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_04331.pdb 1 VVIRSVD--F-----R-DNAKSICVQLD- 20 usage_06223.pdb 1 LIAKVEG--K-----G--NGIKTVIVN-- 18 usage_09038.pdb 1 AWRRSPAQEK-----K-LKKPQVYLP--- 20 usage_11825.pdb 1 IIIRSEN--L-----T-NNAKTIIVHLQ- 20 usage_13857.pdb 1 IIIRSEN--L-----T-NNAKTIIVHLN- 20 usage_13861.pdb 1 IIIRSEN--L-----T-NNAKTIIVHLN- 20 usage_13953.pdb 1 IIIRSEN--------LTNNAKTIIVHLN- 20 usage_17429.pdb 1 IIIRSEN--L-----T-NNAKTIIVH--- 18 usage_17866.pdb 1 VVIRSDN--F-----T-NNAKTIIVQLK- 20 usage_18456.pdb 1 IVIRSEN--L-----T-DNAKTIIVHLK- 20 usage_19871.pdb 1 -IRMSFV--KGWTVTS--T-PCWIELHLN 23 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################