################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:43 2021 # Report_file: c_1068_27.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00121.pdb # 2: usage_00122.pdb # 3: usage_00138.pdb # 4: usage_00235.pdb # 5: usage_00254.pdb # 6: usage_00260.pdb # 7: usage_00299.pdb # 8: usage_00533.pdb # # Length: 67 # Identity: 38/ 67 ( 56.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 67 ( 56.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 67 ( 41.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00121.pdb 1 -EEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHR------- 52 usage_00122.pdb 1 --------------AQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHR------- 39 usage_00138.pdb 1 REEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHR------- 53 usage_00235.pdb 1 -EEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLL 59 usage_00254.pdb 1 REEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVAITHPDGRSHRGIF---- 56 usage_00260.pdb 1 REEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVAITHPDGRSHR------- 53 usage_00299.pdb 1 -EEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLL 59 usage_00533.pdb 1 REEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLL 60 AQAFNSGLLCVACGSYRRGKATCGDVDV ITHPDGRSHR usage_00121.pdb ------- usage_00122.pdb ------- usage_00138.pdb ------- usage_00235.pdb 60 DSLRQEG 66 usage_00254.pdb ------- usage_00260.pdb ------- usage_00299.pdb 60 DSLRQEG 66 usage_00533.pdb 61 DSLRQEG 67 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################