################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:13 2021 # Report_file: c_0903_28.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00176.pdb # 2: usage_00264.pdb # 3: usage_00277.pdb # 4: usage_00278.pdb # 5: usage_00279.pdb # 6: usage_00316.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 60 ( 3.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 60 ( 65.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 NTFRVVGRKIQD------HQVVI-NCAIP-----KGL--KYNQATQTFHQWRDA------ 40 usage_00264.pdb 1 ----TKFDFPGRGNTYSSFKWRWYHFDGVDWDESRKLSRIYKF-----------R----G 41 usage_00277.pdb 1 ----TGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRF-----------A----- 40 usage_00278.pdb 1 ----TGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRF----------------- 39 usage_00279.pdb 1 ----TGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRF-----------A----- 40 usage_00316.pdb 1 -----GPDKCG----ED--YKLH-FIFRHKN-P--KTGVYEEK-----------HAKRPD 34 d g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################