################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:18 2021 # Report_file: c_0054_15.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # 9: usage_00069.pdb # 10: usage_00120.pdb # 11: usage_00121.pdb # 12: usage_00122.pdb # 13: usage_00123.pdb # 14: usage_00243.pdb # 15: usage_00244.pdb # # Length: 264 # Identity: 23/264 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/264 ( 22.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/264 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00012.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00014.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00015.pdb 1 -YELREGIAKRIGERYKKD-ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSY 58 usage_00016.pdb 1 -YELREGIAKRIGERYKKD-ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSY 58 usage_00066.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00067.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00068.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00069.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00120.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00121.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00122.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00123.pdb 1 -PELREALAEKFRRENGLS-VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY 58 usage_00243.pdb 1 SPAFKKSVSQL-Y----TG-VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQL 54 usage_00244.pdb 1 HPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCY 60 l p vt G alfn dPGDeVI P y usage_00011.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00012.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00014.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00015.pdb 59 IPQIILAGGTVNVVETFMS----------KNFQPSLEEVEGLLVGKTKAVLINSPNNPTG 108 usage_00016.pdb 59 IPQIILAGGTVNVVETFMS----------KNFQPSLEEVEGLLVGKTKAVLINSPNNPTG 108 usage_00066.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00067.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00068.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00069.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00120.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00121.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00122.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00123.pdb 59 PEMVRFAGGVVVEVETLPE----------EGFVPDPERVRRAITPRTKALVVNSPNNPTG 108 usage_00243.pdb 55 YDIPKSLGAEVDLWQIEEE----------NGWLPDLEKLRQLIRPTTK-ICINNANNPTG 103 usage_00244.pdb 61 EPMVRMAGAVPVFIPLRSKPTDGMKWTSS-DWTFDPRELESKFSSKTKAIILNTPHNPLG 119 aG v p e TK N pnNPtG usage_00011.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00012.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00014.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00015.pdb 109 VVYRREFLEGLVRLAKKRNFYIISDEVYDSLV-YTD-EFTSILDVSE--GFDRIVYINGF 164 usage_00016.pdb 109 VVYRREFLEGLVRLAKKRNFYIISDEVYDSLV-YTD-EFTSILDVSE--GFDRIVYINGF 164 usage_00066.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00067.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00068.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00069.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00120.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00121.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00122.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00123.pdb 109 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLL-YEG-EHFSPGR--V--APEHTLTVNGA 162 usage_00243.pdb 104 AV-DRTYLEELVEIASEVGAYILSDEVYR--SFSEL-DVPSIIE--V--YD-KGIAVNSL 154 usage_00244.pdb 120 KVYTRQELQVIADLCVKHDTLCISDEVYEWLV-YTGHTHVKIAT--LPGMWERTITIGSA 176 V Le l la y SDE Y y s n usage_00011.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00012.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00014.pdb 163 A-AFAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTN----QEAS-RA 216 usage_00015.pdb 165 SKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALE--------V-D- 214 usage_00016.pdb 165 SKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALE--------V-D- 214 usage_00066.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00067.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00068.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00069.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00120.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00121.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00122.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00123.pdb 163 AKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN----QEAS-RA 217 usage_00243.pdb 155 S-TYSLPGIRIGWVAANHQVTDILRDYRDYT-ICAGVFDDLVAQLALAH----YQEI-L- 206 usage_00244.pdb 177 G-TFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPEC- 234 tGwr G v t q a Al usage_00011.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00012.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00014.pdb 217 FVEMAREAYRRRRDLLLEGLTALG 240 usage_00015.pdb 215 -NSYMVQTFKERKNFVVERLKKMG 237 usage_00016.pdb 215 -NSYMVQTFKERKNFVVERLKKMG 237 usage_00066.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00067.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00068.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00069.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00120.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00121.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00122.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00123.pdb 218 FVEMAREAYRRRRDLLLEGLTALG 241 usage_00243.pdb 207 --ERNRHILEENLAILDQWIEEE- 227 usage_00244.pdb 235 YFNSLPKELEVKRDRMVRLLNS-- 256 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################