################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:21 2021 # Report_file: c_1210_53.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00060.pdb # 3: usage_00376.pdb # 4: usage_00399.pdb # 5: usage_00455.pdb # 6: usage_00456.pdb # 7: usage_00462.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 47 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 47 ( 74.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------AMA-PNHAVVSRMDKVERL-----KQVLLHQQAK-- 28 usage_00060.pdb 1 ---QDG-------IYIFVKP--------------PSIDILLGRLKN- 22 usage_00376.pdb 1 ------NID-F--TRHMSSG--------------NTTDNGIFGLFYG 24 usage_00399.pdb 1 ----ALVQI-PSV-ATSVTIPFNKAGS----AVDLSVTQICGIFSG- 36 usage_00455.pdb 1 -TL---HTFT-LAF-DGLAIVVNQANP----VTNLTREQLYGIYKG- 36 usage_00456.pdb 1 ------------AF-DGLAIVVNQANP----VTNLTREQLYGIYKG- 29 usage_00462.pdb 1 M--------K-TLSPAVITLL--W-----RQ------DA-AEFYFS- 23 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################