################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:51 2021 # Report_file: c_0699_82.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00177.pdb # 2: usage_00369.pdb # 3: usage_00370.pdb # 4: usage_00371.pdb # 5: usage_00928.pdb # 6: usage_01438.pdb # 7: usage_01555.pdb # 8: usage_01574.pdb # 9: usage_01632.pdb # 10: usage_01645.pdb # # Length: 84 # Identity: 1/ 84 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 84 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 84 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 -GAKLVMTAMPPM------AVKA----AVSGG---GDP--KTMVITPASPL--TAGTYKV 42 usage_00369.pdb 1 -VVKFYRD---GA------EIQSSLDFQISQE-----G--DLYSLLIAEAYPEDSGTYSV 43 usage_00370.pdb 1 -VVKFYRD---GA------EIQSSLDFQISQE-----G--DLYSLLIAEAYPEDSGTYSV 43 usage_00371.pdb 1 -VVKFYRD---GA------EIQSSLDFQISQE-----G--DLYSLLIAEAYPEDSGTYSV 43 usage_00928.pdb 1 -VVKFYRD---GA------EIQSSLDFQISQE-----G--DLYSLLIAEAYPEDSGTYSV 43 usage_01438.pdb 1 ---LAAFP---EDRSQPGQ----DSRFRVTQL-----PNGRDFHMSVVRARRNDSGTYLC 45 usage_01555.pdb 1 -EVMWFKD---DN------PVKESRHFQIDYD---E-E--GNCSLTISEVCGDDDAKYTC 44 usage_01574.pdb 1 -DAVIYKN---GS------FI------HSVPRHEV--P--DILEVHLPHAQPQDAGVYSA 40 usage_01632.pdb 1 THIVWYKD---ER------EI------SVDEK-----H--GICTLLITEFSKKDAGIYEV 38 usage_01645.pdb 1 -PVKWCYG---NN------VLRPGDKYSLRQE-----G--ALELVVRN-LRPQDSGRYSC 42 d g Y usage_00177.pdb 43 DWRAVSSD-T--FPITGS------ 57 usage_00369.pdb 44 NATN--SVGR--ATSTAELLVQG- 62 usage_00370.pdb 44 NATN--SVGR--ATSTAELLV--- 60 usage_00371.pdb 44 NATN--SVGR--ATSTAELLVQ-- 61 usage_00928.pdb 44 NATN--SVGR--ATST-------- 55 usage_01438.pdb 46 GAIS-----K--ESLRAELRVTE- 61 usage_01555.pdb 45 KAVN--SLGE--ATCTAELLVETM 64 usage_01574.pdb 41 RYI----GGNLFTSAFTRLIVR-- 58 usage_01632.pdb 39 ILKD--DRGK--DKSRLKLVD--- 55 usage_01645.pdb 43 SFG------D--QTTSATLTVTA- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################