################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:18 2021 # Report_file: c_1370_104.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00202.pdb # 2: usage_00203.pdb # 3: usage_00227.pdb # 4: usage_00261.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00264.pdb # 8: usage_00265.pdb # 9: usage_00315.pdb # 10: usage_00536.pdb # 11: usage_01274.pdb # 12: usage_01343.pdb # 13: usage_01564.pdb # 14: usage_01586.pdb # 15: usage_01587.pdb # # Length: 57 # Identity: 16/ 57 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 57 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 57 ( 3.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00202.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_00203.pdb 1 SDYDIFAAVAERLGKGKEFTEGKDEMGWIKSFYDDAAKQGKAGGVEMPAFDAFWAEG 57 usage_00227.pdb 1 SDYDIFAAVAERLGKGKEFTEGKDEMGWIKSFYDDAAKQGKAAGVEMPAFDAFWAEG 57 usage_00261.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_00262.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_00263.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVEMPAFDAFWAEG 57 usage_00264.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVEMPAFDAFWAEG 57 usage_00265.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVEMPAFDAFWAEG 57 usage_00315.pdb 1 SDYDIFAALAERLGKGAEFTEGRDEMGWISSFYEAAVKQAEFKNVAMPSFEDFWSE- 56 usage_00536.pdb 1 SDFEIFTRFAAVLGKEKEYTRNMGEMEWLETLYNECKAANAGKFEMPDF-ATFWKQG 56 usage_01274.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_01343.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_01564.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_01586.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 usage_01587.pdb 1 SDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEG 57 SDydIFaa AerLGKg EfTeg dEMgWi sfY a kq v mp FW e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################