################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:30 2021 # Report_file: c_1491_121.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00953.pdb # 2: usage_00954.pdb # 3: usage_01689.pdb # 4: usage_01690.pdb # 5: usage_01691.pdb # 6: usage_01692.pdb # 7: usage_01984.pdb # 8: usage_02331.pdb # 9: usage_02514.pdb # 10: usage_02816.pdb # 11: usage_03088.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 61 ( 13.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 61 ( 63.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00953.pdb 1 -RDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 37 usage_00954.pdb 1 -RDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 37 usage_01689.pdb 1 -RDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 37 usage_01690.pdb 1 DRDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 38 usage_01691.pdb 1 DRDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 38 usage_01692.pdb 1 DRDALRSWIADRPEISEQLLRVLA---------------------RRLRRTNNNLADLI- 38 usage_01984.pdb 1 PIEQVEQALKENPELSMLMLRGLS---------------------SRILQTEMMIETLAH 39 usage_02331.pdb 1 -SDMLRNWVADHPAIAEQLLRVLA---------------------RRLRRTNASLADLI- 37 usage_02514.pdb 1 -SDMLRNWVADHPAIAEQLLRVLA---------------------RRLRRTNASLADLIF 38 usage_02816.pdb 1 -SDMLRNWVADHPAIAEQLLRVLA---------------------RRLRRTNASLADLIF 38 usage_03088.pdb 1 ---------------N-PLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSERIADAISRLL- 43 llr l r rt L usage_00953.pdb - usage_00954.pdb - usage_01689.pdb - usage_01690.pdb - usage_01691.pdb - usage_01692.pdb - usage_01984.pdb - usage_02331.pdb - usage_02514.pdb 39 T 39 usage_02816.pdb - usage_03088.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################