################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:49 2021 # Report_file: c_1148_123.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02188.pdb # 2: usage_02697.pdb # 3: usage_02852.pdb # 4: usage_02853.pdb # 5: usage_02854.pdb # 6: usage_02855.pdb # 7: usage_02856.pdb # 8: usage_02857.pdb # # Length: 32 # Identity: 4/ 32 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 32 ( 71.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 32 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02188.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSLDF---- 26 usage_02697.pdb 1 GFDFDTSKNVW-KIVNSSYPIFTESN----WD 27 usage_02852.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSL------ 24 usage_02853.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSLDFGP-- 28 usage_02854.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSLDFGP-- 28 usage_02855.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSLDFGP-- 28 usage_02856.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSL------ 24 usage_02857.pdb 1 AVDYNPRDNLLYVWNNY-H-VVKYSLDFGP-- 28 avDynprdNll vwnNy h vvkySl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################