################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:48 2021 # Report_file: c_1187_125.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00875.pdb # 2: usage_00876.pdb # 3: usage_01109.pdb # # Length: 41 # Identity: 3/ 41 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 41 ( 70.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 41 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00875.pdb 1 --LQVHLSPDADAYSPG-QTVSLNMAT-GMDSWVALAAV-- 35 usage_00876.pdb 1 --LQVHLSPDADAYSPG-QTVSLNMAT-GMDSWVALAAV-- 35 usage_01109.pdb 1 PQVEVTFDI-D-----ANGIVNVSARDRGTGKEQQIVIQSS 35 lqVhlsp a g qtVslnmat Gmdswvalaav #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################