################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:53 2021 # Report_file: c_0542_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00106.pdb # 2: usage_00109.pdb # 3: usage_00112.pdb # 4: usage_00115.pdb # 5: usage_00117.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00213.pdb # # Length: 164 # Identity: 100/164 ( 61.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 145/164 ( 88.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/164 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 ----PYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 56 usage_00109.pdb 1 ---QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 57 usage_00112.pdb 1 ----PYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 56 usage_00115.pdb 1 --MQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 58 usage_00117.pdb 1 ----PYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 56 usage_00178.pdb 1 --MQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 58 usage_00179.pdb 1 ----PYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGD 56 usage_00213.pdb 1 TRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGD 60 pYwAaIEaDIErYLKKsItIRpPEtVFgPMHHLTFAAPaTaAStLClAACELVGGD usage_00106.pdb 57 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRP-VSKPAIQHKYGPNVELLTGDGIVPFGF 115 usage_00109.pdb 58 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRP-VSKPAIQHKYGPNVELLTGDGIVPFGF 116 usage_00112.pdb 57 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRP-VSKPAIQHKYGPNVELLTGDGIVPFGF 115 usage_00115.pdb 59 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRP-VSKPAIQHKYGPNVELLTGDGIVPFGF 117 usage_00117.pdb 57 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRP-VSKPAIQHKYGPNVELLTGDGIVPFGF 115 usage_00178.pdb 59 RSQAMAAAAAIHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGIVPFGF 107 usage_00179.pdb 57 RSQAMAAAAAIHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGIVPFGF 105 usage_00213.pdb 61 RSDAMAAAAAVHLMHVAAYTHENLPLTD---GPMSKSEIQHKFDPNIELLTGDGIIPFGL 117 RSqAMAAAAAiHLvHaAAYvHEhLP paIQHKygPNvELLTGDGIvPFGf usage_00106.pdb 116 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 156 usage_00109.pdb 117 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 157 usage_00112.pdb 116 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 156 usage_00115.pdb 118 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 158 usage_00117.pdb 116 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 156 usage_00178.pdb 108 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 148 usage_00179.pdb 106 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE--- 146 usage_00213.pdb 118 ELMARSMDPTR-NNPDRILRAIIELTRVMGSEGIVEGQYHELGL 160 ELlAgSvDPaR ddPDRILRvIIEisRagGpEGmisGlhrE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################