################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:45 2021 # Report_file: c_0550_13.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00009.pdb # 2: usage_00032.pdb # 3: usage_00106.pdb # 4: usage_00171.pdb # 5: usage_00179.pdb # 6: usage_00191.pdb # 7: usage_00192.pdb # 8: usage_00195.pdb # 9: usage_00196.pdb # 10: usage_00197.pdb # 11: usage_00198.pdb # 12: usage_00209.pdb # 13: usage_00404.pdb # 14: usage_00413.pdb # # Length: 157 # Identity: 9/157 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/157 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/157 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -LVKNFSVPLPVRVICELLGVPAGDQDTFHAWSNALLGD-W--QQ-VVEKEAATVSLVNY 55 usage_00032.pdb 1 ---------------------PLEDRDLFRTFSDAMLSS-TRL-T-AAEIQRVQQDFMVY 36 usage_00106.pdb 1 DIVRDLAQPFTIAVICRLLGVPYEDRGRFQHWSEVIMST-TAY-S-KEEAVSADASIRAY 57 usage_00171.pdb 1 -LVADYALPIPTTVICELLGVPFEDREKFGRWTDAILSTST--LN-PEEGRVKRMELVGY 56 usage_00179.pdb 1 ---------------------PSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 36 usage_00191.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00192.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00195.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00196.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00197.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00198.pdb 1 -LVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST-AEV-T-AEEMQEAAEQAYAY 56 usage_00209.pdb 1 -LVERVLEPFPIAVVSEVMGVPAADRERVHSWTRQII-S-TSG-G-AEAAERAKRGLYGW 55 usage_00404.pdb 1 -LVGSYALAIPVTVICELLGVPEDDRTRLRGWCDAALST-GEL-T-DEECVQSFMDLQKY 56 usage_00413.pdb 1 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSS-S--HGAE-VSERAKNEMNAY 56 P D w y usage_00009.pdb 56 FGELIAVKRENPADDLISELIAIS--DGDSTLTEREIIAL---SIGI-LSA---GHETTA 106 usage_00032.pdb 37 MDGLVAQRRDAPTEDLLGALALATDN--DDHLTKGEIVNM---GVSL-LIA---GHETSV 87 usage_00106.pdb 58 LADLVSARRAAPHDDLLGVLVSARDD--DDRLTEDELITF---GVTL-LVA---GHETSA 108 usage_00171.pdb 57 IGGIIAARRAQPADDLISGMIEAR--DVQDKLTEQELLDH---CIGL-LIA---GHETTA 107 usage_00179.pdb 37 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 87 usage_00191.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00192.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00195.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00196.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00197.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00198.pdb 57 MGDLIDRRRKEPTDDLVSALVQARDQ--QDSLSEQELLDL---AIGL-LVA---GYESTT 107 usage_00209.pdb 56 ITETVRARAGSEGGDVYSMLGAAV--GRG-EV-----GETEAV---GLAGPLQIGGEAVT 104 usage_00404.pdb 57 FEDLVKERRAEPRDDLTSALIEARDA--HDRLAEPELIGL---CISI-LIG---GFETTA 107 usage_00413.pdb 57 FSDLIGLRSDSAGEDVTSLLGAAV--GRD-EI-----TLSEAV---GLAVLLQIGGEAVT 105 r D l a G E usage_00009.pdb 107 NQISMFLVTLLHNPEELDKLRDNREAIPKAVDELLRF 143 usage_00032.pdb 88 NQITNLVHLLLTERKRYESLVADPALVPAAVEEMLRY 124 usage_00106.pdb 109 HQLGNMVYALLTHEDQLSLLREQPELLPRAVEELLRF 145 usage_00171.pdb 108 SQIPSFVYALLDQPQHWKRLLDDPELIPSAVEELFRF 144 usage_00179.pdb 88 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 124 usage_00191.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00192.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00195.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00196.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00197.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00198.pdb 108 TQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRW 144 usage_00209.pdb 105 HNVGQMLYLLLTRRELMARMRERPGARGTALDELLR- 140 usage_00404.pdb 108 SEISSFVHVLQQRRELWTRLCADPEAIPAAVEELLRF 144 usage_00413.pdb 106 NNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRW 142 L l p p A El R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################