################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:42 2021 # Report_file: c_1382_71.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00139.pdb # 2: usage_00239.pdb # 3: usage_00258.pdb # 4: usage_00259.pdb # 5: usage_00972.pdb # 6: usage_01041.pdb # 7: usage_01043.pdb # 8: usage_01202.pdb # 9: usage_01203.pdb # 10: usage_01336.pdb # 11: usage_01727.pdb # 12: usage_01728.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 40 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 40 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 -IEEIIRNIGKITCDL-TPQQVHTFYEACGYMVS------ 32 usage_00239.pdb 1 FIDEILNNINTIICDL-QPQQVHTFYEAVGYMIGA----- 34 usage_00258.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGAQ---- 34 usage_00259.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGAQ---- 34 usage_00972.pdb 1 KDICEEQ-----------VNSLPGSITKAGDFLEAN---- 25 usage_01041.pdb 1 FIQTIIRDIQKTTADL-QPQQVHTFYKACGIIISEE---- 35 usage_01043.pdb 1 FIDEILNNINTIICDL-QPQQVHTFYEAVGYMIGA----- 34 usage_01202.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGA----- 33 usage_01203.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGA----- 33 usage_01336.pdb 1 -LLNYLREM---R-HRFQTQQLLEMCKDVCEAMEYLESKQ 35 usage_01727.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGAQ---- 34 usage_01728.pdb 1 -IDEILNNINTIICDL-QPQQVHTFYEAVGYMIGAQ---- 34 qq g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################