################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:34 2021 # Report_file: c_0480_7.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00026.pdb # 2: usage_00063.pdb # 3: usage_00100.pdb # 4: usage_00125.pdb # 5: usage_00126.pdb # 6: usage_00164.pdb # 7: usage_00183.pdb # 8: usage_00186.pdb # 9: usage_00188.pdb # 10: usage_00211.pdb # 11: usage_00236.pdb # # Length: 96 # Identity: 17/ 96 ( 17.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 96 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 96 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -REVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 58 usage_00063.pdb 1 -QKVAIKIVNREKLS-ESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSG 58 usage_00100.pdb 1 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 60 usage_00125.pdb 1 -KEVAVRIIDKTQLN-SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 58 usage_00126.pdb 1 -KEVAVRIIDKTQLN-SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 58 usage_00164.pdb 1 -HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 59 usage_00183.pdb 1 -HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 59 usage_00186.pdb 1 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 60 usage_00188.pdb 1 GEMVAIKIMDKNALG-S-DLPRVKTEIDALKSLRHQHICQLYHVLETKNKIFMVLEYCPG 58 usage_00211.pdb 1 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 60 usage_00236.pdb 1 GDNVAIKIMAKSTILKNRMVDQIKREISIMKIVRHPNIVRLYEVLASKSKIYIVLEFVTG 60 VA I rE K Hp i L V v E G usage_00026.pdb 59 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 94 usage_00063.pdb 59 GELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHS 94 usage_00100.pdb 61 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 96 usage_00125.pdb 59 GEVFDYLVAHGRMKEKEARAK--------------- 79 usage_00126.pdb 59 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 94 usage_00164.pdb 60 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHR-- 93 usage_00183.pdb 60 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHR-- 93 usage_00186.pdb 61 GELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 96 usage_00188.pdb 59 GELFDYIISQDRLSEEETRVV--------------- 79 usage_00211.pdb 61 GELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 96 usage_00236.pdb 61 GELFDRIVHKGRLKEDESRKYFQQLVDAVAHCHSKG 96 GE FDy gR e E R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################