################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:29 2021 # Report_file: c_0639_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00012.pdb # 2: usage_00040.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00081.pdb # 6: usage_00082.pdb # 7: usage_00083.pdb # 8: usage_00088.pdb # 9: usage_00089.pdb # 10: usage_00102.pdb # # Length: 153 # Identity: 14/153 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/153 ( 19.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/153 ( 20.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 ----FAQMMKGLEVGRLQVAARATGVARAAFEDALRYSQERESFGKPIWQHQSVGNMLAD 56 usage_00040.pdb 1 ----PMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGHIAD 56 usage_00047.pdb 1 ----------NLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLAN 50 usage_00048.pdb 1 ----------NLEGGRIGIAAQATGIARAAFDRARRYARER----KPIAEHQAIAEKLAN 46 usage_00081.pdb 1 ----------NLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 50 usage_00082.pdb 1 ----------NLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 50 usage_00083.pdb 1 ----------NLEGGRIGIAAQAVGMARAAFEAARDYARERITF------HQAVAFRLAD 44 usage_00088.pdb 1 EGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAE 60 usage_00089.pdb 1 -----------LQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAE 49 usage_00102.pdb 1 ------------NKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVD 48 R A a y R Q la usage_00012.pdb 57 MGTKLYAARSLLLSAAEKFDAGQRCDMEAGMAKLFASETAMQIALDAVRVHGGYGYSTEY 116 usage_00040.pdb 57 LWTAEQIAARVCEYASDH------MVPATILAKHVAAERAAAGAATAAQVLASAGA-G-H 108 usage_00047.pdb 51 MATQINAARLLTHHAARLRTAGLPCLSEASQAKLFASEMAEAVCSDAIQIHGGYGFLVDY 110 usage_00048.pdb 47 MATQINAARLLTHHAARLRTAGLPCLSEASQAKLFASEMAEAVCSDAIQIHGGYGFLVDY 106 usage_00081.pdb 51 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADY 110 usage_00082.pdb 51 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADY 110 usage_00083.pdb 45 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADY 104 usage_00088.pdb 61 MATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEY 120 usage_00089.pdb 50 MATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEY 109 usage_00102.pdb 49 MLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREF 108 m t r AK E A A q hggyG usage_00012.pdb 117 DVERYFRDAPLMIVGEGTNEIQRNVIAKQLVA- 148 usage_00040.pdb 109 VVERAYRDAKLMEIIEGSSEMCRVMLAQHALAL 141 usage_00047.pdb 111 EVERHYRDARITQIYEGTSEVQRMVIARQL--- 140 usage_00048.pdb 107 EVERHYRDARITQIYEGTSEVQRMVIARQL--- 136 usage_00081.pdb 111 PVERIYRDVRVCQIYEGTSDVQRLVIARGL--- 140 usage_00082.pdb 111 PVERIYRDVRVCQIYEGTSDVQRLVIARGL--- 140 usage_00083.pdb 105 PVERIYRDVRVCQIYEGTSDVQRLVIARGL--- 134 usage_00088.pdb 121 EIARRYRDIPVSAIYAGTNEMMKTIIARQL--- 150 usage_00089.pdb 110 EIARRYRDIPVSAIYAGTNEMMKTIIARQL--- 139 usage_00102.pdb 109 PVEKLLRDVKLNQIYEGTNEIQRLIIARHI--- 138 r RD i Gt iA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################