################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:38 2021 # Report_file: c_1384_21.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00126.pdb # 4: usage_00127.pdb # 5: usage_00128.pdb # 6: usage_00129.pdb # 7: usage_00130.pdb # 8: usage_00131.pdb # 9: usage_00142.pdb # 10: usage_00153.pdb # 11: usage_00154.pdb # 12: usage_00417.pdb # 13: usage_00418.pdb # 14: usage_00419.pdb # 15: usage_00466.pdb # # Length: 60 # Identity: 9/ 60 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 60 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 60 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 --KRIASMAGRQK-RFAERILTRSELDQYYELSEKRKNEFLAGRFAAKEAFSKAFG---- 53 usage_00109.pdb 1 ELKRIASMAGRQK-RFAERILTRSELDQYYELSEKRKNEFLAGRFAAKEAFSKAFG---- 55 usage_00126.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00127.pdb 1 --ASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 53 usage_00128.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00129.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00130.pdb 1 --ASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 53 usage_00131.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00142.pdb 1 -IPDFAEQVD---------TFTPGERRDAS-----SAARHLAARWAAKEAVIKAWSGSRF 45 usage_00153.pdb 1 --NRIEKL-----DK-FERILTENERNVAKGLKGSRLTEFVAGRFAAKEAYSKAVG---- 48 usage_00154.pdb 1 -LNRIEKL-----DK-FERILTENERNVAKGLKGSRLTEFVAGRFAAKEAYSKAVG---- 49 usage_00417.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00418.pdb 1 -LASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 54 usage_00419.pdb 1 --ASIESAVTRHE-GFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMG---- 53 usage_00466.pdb 1 --PGFAEQLSRPG-STFEQVFSPLERRHAQTRRSGSRTEHLAGRWAAKEAFIKAWSQAIY 57 t E e AgR AKEA KA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################