################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:54 2021 # Report_file: c_0385_37.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00118.pdb # 2: usage_00135.pdb # 3: usage_00182.pdb # 4: usage_00235.pdb # 5: usage_00266.pdb # 6: usage_00267.pdb # 7: usage_00384.pdb # 8: usage_00406.pdb # 9: usage_00408.pdb # 10: usage_00447.pdb # 11: usage_00452.pdb # 12: usage_00463.pdb # 13: usage_00476.pdb # 14: usage_00487.pdb # 15: usage_00544.pdb # # Length: 93 # Identity: 3/ 93 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 93 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 93 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 ------EQ-SGTAVRKPGASVTLSCQASGYN--FVKYIIHWVRQKPGLGFEWVGMIDP-Y 50 usage_00135.pdb 1 ----------GAEVKKPGSSVKVSCKASGNS--FSNHDVHWVRQATGQGLEWMGWMSH-E 47 usage_00182.pdb 1 EVQL--QQ-SGAELVKPGSSVKISCKTSGDS--FTAYNMNWVKQSHGKSLEWIGNINP-Y 54 usage_00235.pdb 1 ----------GAEVKKPGSSVKVSCETSGGTFD-N-YALNWVRQAPGQGLEWIGGVVP-L 47 usage_00266.pdb 1 --VVSQ-H-PSRVIAKSGTSVKIECRSLDFQ--A--TTMFWYRQFPKQSLMLMATSAEGS 52 usage_00267.pdb 1 -----------PELKKPGETVKISCKASGYT--FTDFSMHWVNQAPGKGLNWMGWVNT-E 46 usage_00384.pdb 1 EVQL--VQ-PGVELRNPGASVKVSCKASGYI--FTMNSIDWVRQAPGQGLEWMGRIDP-E 54 usage_00406.pdb 1 -----------AEVKKPGASVKVSCKASGYT--FTSYAMHWVRQAPGQRLEWMGWINA-G 46 usage_00408.pdb 1 -VQL--VE-SGAEVKKPGASVKVSCKASGYT--FTSYAMHWVRQAPGQRLEWMGWINA-G 53 usage_00447.pdb 1 ----------GAEVKKPGSSAKVSCKASRGT--LSSYFISWVRQAPGQGLEWLGGITP-L 47 usage_00452.pdb 1 EVQL--QE-SGPELEMPGASVKISCKASGSS--FTGFSMNWVKQSNGKSLEWIGNIDT-Y 54 usage_00463.pdb 1 EVQL--VE-SGAQVKKPGASVTVSCTASGYK--FTGYHMHWVRQAPGRGLEWMGWINP-F 54 usage_00476.pdb 1 EVQL--VE-SGAEVKKPGSSVKVSCKASGGT--FITHVFTWVRQAPGQGLEWVGGFIA-I 54 usage_00487.pdb 1 --------QSGAEVKKPGSSVKVSCKASGYT--FTNYYIYWVRQAPGQGLEWIGGINP-T 49 usage_00544.pdb 1 ----------ISISRPRDETAQISCKVFIES--FRSVTIHWYRQKPNQGLEFLLYVLA-T 47 g sC W Q l usage_00118.pdb 51 RGRPWSAHK--FQGRLSLSRDTSMEILYMTLTS 81 usage_00135.pdb 48 GDKTGLAQK--FQGRVTITRDSGASTVYMELRG 78 usage_00182.pdb 55 YGSTRYNQK--FKGKATLTVDKSSSTAYIQLNS 85 usage_00235.pdb 48 FGTTRNAQK--FQGRVTISDDKSTGTGHMELRS 78 usage_00266.pdb 53 K-ATYEQGV--EKDKFLINHAS-LTLSTLTV-- 79 usage_00267.pdb 47 TGEPTYADD--FKGRFAFSLETSASTAYLQINS 77 usage_00384.pdb 55 DGGTKYAQK--FQGRVTFTADTSTSTAYVELNS 85 usage_00406.pdb 47 NGNTKYSQK--FQDRVTITRDTSASTAYMELSS 77 usage_00408.pdb 54 NGNTKYSQK--FQDRVTITRDTSASTAYMELSS 84 usage_00447.pdb 48 LGTANYAQK--FQGRVTITADKSTNTAFMQLSS 78 usage_00452.pdb 55 YGGTTYNQK--FKGKATLTVDKSSSTAYMQLKS 85 usage_00463.pdb 55 RGAVKYPQN--FRGRVSMTRDTSMEIFYMELS- 84 usage_00476.pdb 55 FGTSNYAQK--FQGRVTITADESTSTAYMELTS 85 usage_00487.pdb 50 SGGSNFNEK--FKTRVTITADESSTTAYMELS- 79 usage_00544.pdb 48 P-THIFLDKEYK-KMEASKNP-SASTSILTIYS 77 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################