################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:53 2021 # Report_file: c_1292_195.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00161.pdb # 2: usage_00302.pdb # 3: usage_00914.pdb # 4: usage_00921.pdb # 5: usage_01488.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 35 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 35 ( 31.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00161.pdb 1 GDAFKECFVSRPHPKPK-QFSSFEKRAKIFC---- 30 usage_00302.pdb 1 TPGLRRFVRNAKLPRQP-RFS---QHAPLIVDYD- 30 usage_00914.pdb 1 TPGLRRFVRSARLPRQP-RFS---QHAPLIV-DY- 29 usage_00921.pdb 1 SPLISNSK-KNVTTAQGH--YG--NKIIILEYRFD 30 usage_01488.pdb 1 TPGLRRFVRNAKLPRQP-RFS---QHAPLIVDYD- 30 p p q s a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################