################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:37 2021 # Report_file: c_1172_138.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00230.pdb # 2: usage_00695.pdb # 3: usage_00889.pdb # 4: usage_01071.pdb # 5: usage_01072.pdb # 6: usage_01796.pdb # 7: usage_02973.pdb # 8: usage_03216.pdb # 9: usage_03514.pdb # 10: usage_03813.pdb # 11: usage_03821.pdb # 12: usage_04114.pdb # 13: usage_04240.pdb # 14: usage_04523.pdb # 15: usage_04894.pdb # 16: usage_05137.pdb # 17: usage_05138.pdb # 18: usage_05196.pdb # 19: usage_05197.pdb # 20: usage_05249.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 43 ( 18.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 43 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00230.pdb 1 PQIEVTFDID-------ANGILNVTATDKS-TGKANKITITN- 34 usage_00695.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_00889.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_01071.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_01072.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_01796.pdb 1 -HIRVTFQVD-------ADGLLSVTAMEKS-TGVEASIQVK-- 32 usage_02973.pdb 1 -QIEVTFDID-------ANGILNVSAVDKS-TGKENKITIT-- 32 usage_03216.pdb 1 PQIEVTFEID-------VNGILRVTAEDKG-TGNKNKITIT-- 33 usage_03514.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKIT---- 31 usage_03813.pdb 1 PQIEVTFNID-------ANGILNVSAEDKS-TGKSNRITIQ-- 33 usage_03821.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_04114.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_04240.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 usage_04523.pdb 1 PQIEVTFDID-------ANGILNVSAVDKS-TGKENKITIT-- 33 usage_04894.pdb 1 -----PNLTVSWDPRISSEQDYTCIAEN-AVSNLSFSVS---- 33 usage_05137.pdb 1 -QIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIKAS 34 usage_05138.pdb 1 --IEVTFDID-------ADGILHVSAKDKN-SGKEQKIT---- 29 usage_05196.pdb 1 PQVEVTFDID-------ANGIVNVSARDRG-TGKEQQIVIQ-- 33 usage_05197.pdb 1 PQVEVTFDID-------ANGIVNVSARDRG-TGKEQQIV---- 31 usage_05249.pdb 1 PQIEVTFDID-------ADGILHVSAKDKN-SGKEQKITIK-- 33 tf d g v A g i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################