################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:57 2021 # Report_file: c_1315_50.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00063.pdb # 2: usage_00092.pdb # 3: usage_00115.pdb # 4: usage_00143.pdb # 5: usage_00241.pdb # 6: usage_00242.pdb # 7: usage_00243.pdb # 8: usage_00244.pdb # 9: usage_00245.pdb # 10: usage_00246.pdb # 11: usage_00248.pdb # 12: usage_00249.pdb # 13: usage_00373.pdb # 14: usage_00375.pdb # 15: usage_00376.pdb # 16: usage_00377.pdb # 17: usage_00378.pdb # 18: usage_00381.pdb # 19: usage_00382.pdb # 20: usage_00403.pdb # 21: usage_00404.pdb # 22: usage_00464.pdb # 23: usage_00471.pdb # 24: usage_00603.pdb # 25: usage_00654.pdb # 26: usage_00655.pdb # 27: usage_00656.pdb # 28: usage_00663.pdb # # Length: 43 # Identity: 5/ 43 ( 11.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 43 ( 62.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 43 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 SVEEAKKVILQDKPEAQIIVLEKQAVDNAYAEYRIDRVRLA-- 41 usage_00092.pdb 1 SVEEAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 usage_00115.pdb 1 TVDQAREYFTLHYPQYDVYFLPEGSP-VTLD-LRYNRVRVFYN 41 usage_00143.pdb 1 SVEEAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 usage_00241.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 usage_00242.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTKE-YRIDRVRLF-- 39 usage_00243.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTGE-YRIDRVRLF-- 39 usage_00244.pdb 1 -VEEAKKVILQDKPAAQIIVLPVGTI-VTAE-YRIDRVRLF-- 38 usage_00245.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTYE-YRIDRVRLF-- 39 usage_00246.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTFE-YRIDRVRLF-- 39 usage_00248.pdb 1 -VEEAKKVILQDKPAAQIIVLPVGTI-VTME-ARIDRVRLF-- 38 usage_00249.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTKE-YRIDRVRLF-- 39 usage_00373.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VAME-YRIDRVRLF-- 39 usage_00375.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VPME-YRIDRVRLF-- 39 usage_00376.pdb 1 -VEEAKKVILQDKPAAQIIVLPVGTI-VTMS-YRIDRVRLF-- 38 usage_00377.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTME-YAIDRVRLF-- 39 usage_00378.pdb 1 -VEEAKKVILQDKPAAQIIVLPVGTI-VTME-YRIDRVALFVD 40 usage_00381.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTME-YRIDAVRLFVD 41 usage_00382.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTRS-YRIDRVRLF-- 39 usage_00403.pdb 1 -VAAAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLFVD 40 usage_00404.pdb 1 SVAAAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLFVD 41 usage_00464.pdb 1 SVEEAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 usage_00471.pdb 1 -VEEAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 38 usage_00603.pdb 1 SVEEAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 usage_00654.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTME-YRIDRVRLFVD 41 usage_00655.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTMA-YRIDRVRLFVD 41 usage_00656.pdb 1 SVEEAKKVILQDKPAAQIIVLPVGTI-VTME-YRIDRVRLA-- 39 usage_00663.pdb 1 AVAAAKKVILQDKPEAQIIVLPVGTI-VTME-YRIDRVRLF-- 39 V AkkvilqdkP aqiivLp g v ridrVrl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################