################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:07 2021 # Report_file: c_1484_618.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00160.pdb # 2: usage_01124.pdb # 3: usage_01492.pdb # 4: usage_02537.pdb # 5: usage_02816.pdb # 6: usage_03235.pdb # 7: usage_03831.pdb # 8: usage_03832.pdb # # Length: 113 # Identity: 0/113 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/113 ( 0.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/113 ( 54.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00160.pdb 1 ---------TKAGYERLMQQLERERERLQEISADFEQALEEG------------------ 33 usage_01124.pdb 1 ---------TKAGYERLMQQLERERERLQEATKILQELMESS------------------ 33 usage_01492.pdb 1 DAGFK-----LQYEKHNLSNLQKAYDLNLRDVADLERG---------------------- 33 usage_02537.pdb 1 ----------LGQLDTYQQQLQLVIQQKQKVQADLNEAKKALEEIETLPDDAQIYKTVGT 50 usage_02816.pdb 1 ----------KPLRDYCTQLHDIENQADDVYELFITKLFEEE------------------ 32 usage_03235.pdb 1 -----VDF-LISKVTQAISTLEKYKDNFNKLLSELEVLELEN------------------ 36 usage_03831.pdb 1 --------SEDYKLREAQRELDKQRKDTEEIRKRLKEIQRLT----DER----------- 37 usage_03832.pdb 1 ----------DYKLREAQRELDKQRKDTEEIRKRLKEIQRLT----DER----------- 35 l usage_00160.pdb 34 ------DLRE-------NAG-YDEARRAMWQNEARIDSLEDILSRA------- 65 usage_01124.pdb 34 ------D-DY------DDSG-LEAAKQEKARIEARIDSLEDILSR-------- 64 usage_01492.pdb 34 ------F-LEK---PKQVE--GKKLEKKVKYFNEEAERHLETLDG-------- 66 usage_02537.pdb 51 LIVKTT---KEKAVQELKEK-IETLEVRLNALNRQEQKINEKVKELTQKIQAA 99 usage_02816.pdb 33 --------KDCIELIKIKEI-MHELEKTTDAAEHVGKILKNLIVKY---S--- 70 usage_03235.pdb 37 ------R-------------VTLADVVRTLAKGFELLRIVEEIR--------- 61 usage_03831.pdb 38 ------T-STADELIKELRE-IIRRLQEQSEKLREIIEELEKIIRK---R--- 76 usage_03832.pdb 36 ------T-STADELIKELRE-IIRRLQEQSEKLREIIEELEKIIRK------- 73 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################