################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:11 2021 # Report_file: c_1456_60.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00017.pdb # 2: usage_00155.pdb # 3: usage_00365.pdb # 4: usage_00388.pdb # 5: usage_00462.pdb # 6: usage_00477.pdb # 7: usage_00512.pdb # 8: usage_00973.pdb # 9: usage_00981.pdb # 10: usage_00988.pdb # 11: usage_01029.pdb # 12: usage_01203.pdb # 13: usage_01225.pdb # 14: usage_01251.pdb # 15: usage_01291.pdb # 16: usage_01299.pdb # 17: usage_01452.pdb # 18: usage_01478.pdb # 19: usage_01490.pdb # 20: usage_01707.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 35 ( 11.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 35 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00155.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00365.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00388.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00462.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRN---- 23 usage_00477.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00512.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00973.pdb 1 --PIDLYYLMDL--------SYSMLDDLRNV---- 21 usage_00981.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_00988.pdb 1 EM-----DIR--FRGDDPEAYYKALREMIRQARKF 28 usage_01029.pdb 1 -D-----VSF--RLSGADPRSYGMFIKDLRN---- 23 usage_01203.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRN---- 23 usage_01225.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_01251.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRN---- 23 usage_01291.pdb 1 -------VSF--RLSGADPSSYGMFIKDLRNA--- 23 usage_01299.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRN---- 23 usage_01452.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_01478.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 usage_01490.pdb 1 -D-----VSF--RLSGADPRSYGMFIKDLRNAL-- 25 usage_01707.pdb 1 -D-----VSF--RLSGADPSSYGMFIKDLRNA--- 24 sY m r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################