################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:28 2021 # Report_file: c_1028_73.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00233.pdb # 2: usage_00247.pdb # 3: usage_00613.pdb # 4: usage_00614.pdb # # Length: 62 # Identity: 4/ 62 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 62 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 62 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 ---ISEVVVPE---GYDTVVEAIATALKQGA------RFIITAGGTGIRAK-NQTPEATA 47 usage_00247.pdb 1 MSSSIEIFPD-SDILVAAAGKRLVGAIGAA-VAARGQALIVLTG----GGNGIALLRYLS 54 usage_00613.pdb 1 -DTVIERHAD-TAALVAAAGDRLVDAISSA-IGERGQATIVLTG----GGTGIGLLKRVR 53 usage_00614.pdb 1 ---VIERHAD-TAALVAAAGDRLVDAISSA-IGERGQATIVLTG----GGTGIGLLKRVR 51 iE d lvaaag rlv Ai a a IvltG gg i ll usage_00233.pdb 48 S- 48 usage_00247.pdb 55 AQ 56 usage_00613.pdb 54 ER 55 usage_00614.pdb 52 E- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################