################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:56 2021 # Report_file: c_1113_17.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00172.pdb # 2: usage_00239.pdb # 3: usage_00241.pdb # 4: usage_00833.pdb # 5: usage_00955.pdb # 6: usage_00956.pdb # 7: usage_01057.pdb # 8: usage_01090.pdb # # Length: 91 # Identity: 38/ 91 ( 41.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 91 ( 41.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 91 ( 9.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00172.pdb 1 -STSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 58 usage_00239.pdb 1 --GSLALFYRKVYHLASVRLRDLCLKLDV--SNELRRKIWTCFEFTLVHCPDLMKDRHLD 56 usage_00241.pdb 1 RTGSLALFYRKVYHLASVRLRDLCLKLDV--SNELRRKIWTCFEFTLVHCPDLMKDRHLD 58 usage_00833.pdb 1 -STSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 58 usage_00955.pdb 1 --TSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 57 usage_00956.pdb 1 -STSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 58 usage_01057.pdb 1 --TSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 57 usage_01090.pdb 1 -STSLSLFYKKVYRLAYLRLNTLCERLL-SEHPELEHIIWTLFQHTLQNEYELMRDRHLD 58 SL LFY KVY LA RL LC L EL IWT F TL LM DRHLD usage_00172.pdb 59 QIMMCSMYGICKVKNIDLKFKIIVTAYK--- 86 usage_00239.pdb 57 QLLLCAFYIMAKVTKEERTFQEIMKSYRNQ- 86 usage_00241.pdb 59 QLLLCAFYIMAKVTKEERTFQEIMKSYRNQP 89 usage_00833.pdb 59 QIMMCSMYGICKVKNIDLKFKIIVTAYK--- 86 usage_00955.pdb 58 QIMMCSMYGICKVKNIDLKFKIIVTAYK--- 85 usage_00956.pdb 59 QIMMCSMYGICKVKNIDLKFKIIVTAY---- 85 usage_01057.pdb 58 QIMMCSMYGICKVKNIDLKFKIIVTAYK--- 85 usage_01090.pdb 59 QIMMCSMYGICKVKNIDLKFKIIVTAYK--- 86 Q C Y KV F I Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################