################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:53 2021 # Report_file: c_1411_137.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00113.pdb # 2: usage_00187.pdb # 3: usage_00537.pdb # 4: usage_01106.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 72 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 72 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 -VNKVAEVVRDLWRRDQ-ERGLSAGEKRML----AKARQILVGELALADAK----AETIL 50 usage_00187.pdb 1 DVNKVAEVVRDLWRRDQ-ERGLSAGEKRML----AKARQILVGELAL----AESTDDAKA 51 usage_00537.pdb 1 -VFEIAEVLRDLYLLKGDK-DLSFGERKML----DTARSLLIKELSL----AKDCSEDEI 50 usage_01106.pdb 1 EFADFVQDVLKTDP----------------TGLSSTVIAAFVNVFGT----LVSSS-HNT 39 v aevvrdl ar lv el l usage_00113.pdb 51 DEVLAAAALE-- 60 usage_00187.pdb 52 ETILDEVL---- 59 usage_00537.pdb 51 ESDLKKIFN--- 59 usage_01106.pdb 40 DQDALAALRTLT 51 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################