################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:27 2021 # Report_file: c_0868_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00118.pdb # 2: usage_00215.pdb # 3: usage_00216.pdb # 4: usage_00217.pdb # 5: usage_00218.pdb # 6: usage_00219.pdb # 7: usage_00243.pdb # # Length: 96 # Identity: 79/ 96 ( 82.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/ 96 ( 82.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 96 ( 17.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQ----------------GNPTRNCLEKA 44 usage_00215.pdb 1 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQG--------GFTYSRSGNPTRNCLEKA 52 usage_00216.pdb 1 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGA-----HSGFTYSRSGNPTRNCLEKA 55 usage_00217.pdb 1 -FATQAIHVGQDPEQWTSRAVVPPISLSTTFKQG------ASGFTYSRSGNPTRNCLEKA 53 usage_00218.pdb 1 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQG------HSGFTYSRSGNPTRNCLEKA 54 usage_00219.pdb 1 -FATQAIHVGQDPEQWTSRAVVPPISLSTTFKQG-A---P-SGFTYSRSGNPTRNCLEKA 54 usage_00243.pdb 1 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQG-APGQ-HSGFEYSRSGNPTRNCLEKA 58 FATQAIHVGQDPEQWTSRAVVPPISLSTTFKQ GNPTRNCLEKA usage_00118.pdb 45 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 80 usage_00215.pdb 53 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 88 usage_00216.pdb 56 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 91 usage_00217.pdb 54 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 89 usage_00218.pdb 55 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 90 usage_00219.pdb 55 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 90 usage_00243.pdb 59 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM 94 VAALDGAKYCLAFASGLAATVTITHLLKAGDQIICM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################