################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:07 2021 # Report_file: c_1399_169.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00161.pdb # 2: usage_00681.pdb # 3: usage_00682.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 61 ( 60.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 61 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00161.pdb 1 -----NLNQFAMSLMKAENRERFK--ADESAYLDEW-------NLTPAAKAAVLAR---- 42 usage_00681.pdb 1 PDRARGSIARTYLYMS--QEYG--FQL-SKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQ 55 usage_00682.pdb 1 PDRARGSIARTYLYMS--QEYG--FQL-SKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQ 55 gsiartylyMs qeyg l skqqqqlm pvdewectrddri usage_00161.pdb - usage_00681.pdb 56 G 56 usage_00682.pdb 56 G 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################