################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:13 2021 # Report_file: c_1372_47.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00064.pdb # 2: usage_00536.pdb # 3: usage_00537.pdb # 4: usage_00538.pdb # 5: usage_00539.pdb # 6: usage_00540.pdb # 7: usage_00541.pdb # 8: usage_00542.pdb # 9: usage_00578.pdb # 10: usage_00579.pdb # 11: usage_00580.pdb # 12: usage_00581.pdb # 13: usage_00880.pdb # 14: usage_00881.pdb # 15: usage_00882.pdb # 16: usage_00936.pdb # 17: usage_00937.pdb # 18: usage_00939.pdb # 19: usage_00940.pdb # 20: usage_00941.pdb # 21: usage_00942.pdb # 22: usage_00969.pdb # 23: usage_01277.pdb # 24: usage_01278.pdb # 25: usage_01279.pdb # 26: usage_01280.pdb # 27: usage_01281.pdb # 28: usage_01282.pdb # # Length: 67 # Identity: 4/ 67 ( 6.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 67 ( 52.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 67 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 NI--------FYCLGGITLT-CFLIQFATGFAMTFYY-----KPTVTEA-------YASV 39 usage_00536.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00537.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00538.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00539.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00540.pdb 1 -----------YNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 47 usage_00541.pdb 1 --EAKKINDELYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 56 usage_00542.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00578.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00579.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00580.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00581.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00880.pdb 1 -----------YNINKILFCESNPIPIKTA-YLAG--LIESLEFRLPLCSPSKENFAKIE 46 usage_00881.pdb 1 ----------LYNINKILFCESNPIPIKTA-YLAG--LIESLEFRLPLCSPSKENFAKIE 47 usage_00882.pdb 1 ----------LYNINKILFCESNPIPIKTA-YLAG--LIESLEFRLPLCSPSKENFAKIE 47 usage_00936.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00937.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00939.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00940.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00941.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00942.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_00969.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01277.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01278.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01279.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01280.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01281.pdb 1 ----------LYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 48 usage_01282.pdb 1 --EAKKINDELYNINKILFCESNPIPIKTAMYLAG--LIESLEFRLPLCSPSKENFAKIE 56 YninkIlfc snpIpikTa ylag efrlplc akie usage_00064.pdb 40 QYIMNEV 46 usage_00536.pdb 49 EVMK--- 52 usage_00537.pdb 49 EVMK--- 52 usage_00538.pdb 49 EVMK--- 52 usage_00539.pdb 49 EVM---- 51 usage_00540.pdb 48 EVMKKY- 53 usage_00541.pdb 57 EVMKKY- 62 usage_00542.pdb 49 EVMKKY- 54 usage_00578.pdb 49 EVMKKY- 54 usage_00579.pdb 49 EVMK--- 52 usage_00580.pdb 49 EVMKKY- 54 usage_00581.pdb 49 EVMKKY- 54 usage_00880.pdb 47 EVK---- 49 usage_00881.pdb 48 EVK---- 50 usage_00882.pdb 48 EVKKY-- 52 usage_00936.pdb 49 EVMKKY- 54 usage_00937.pdb 49 EVMKKY- 54 usage_00939.pdb 49 EVM---- 51 usage_00940.pdb 49 EVMKKY- 54 usage_00941.pdb 49 EVMKKY- 54 usage_00942.pdb 49 EVM---- 51 usage_00969.pdb 49 EVMKKY- 54 usage_01277.pdb 49 EVMK--- 52 usage_01278.pdb 49 EVMK--- 52 usage_01279.pdb 49 EVMK--- 52 usage_01280.pdb 49 EVM---- 51 usage_01281.pdb 49 EVMKKY- 54 usage_01282.pdb 57 EVMKKY- 62 ev #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################