################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:40 2021 # Report_file: c_1256_184.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00679.pdb # 2: usage_00771.pdb # 3: usage_00872.pdb # 4: usage_00873.pdb # 5: usage_01081.pdb # 6: usage_01128.pdb # 7: usage_01196.pdb # 8: usage_01198.pdb # 9: usage_01199.pdb # 10: usage_01418.pdb # 11: usage_01684.pdb # 12: usage_02451.pdb # 13: usage_02487.pdb # 14: usage_02730.pdb # 15: usage_03484.pdb # 16: usage_03853.pdb # 17: usage_03978.pdb # # Length: 36 # Identity: 1/ 36 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 36 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 36 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00679.pdb 1 --KDLRLYQNQLKSVPDGVFD-RLTSLQYI----WL 29 usage_00771.pdb 1 --QRLWLNNNQITKLEPGVFD-HLVNLQQL----YF 29 usage_00872.pdb 1 --QVLHLYINQITKLEPGVFD-SLTQLTYL----NL 29 usage_00873.pdb 1 --THLALHINQLKSIPMGVFD-NLKSLTHI----YL 29 usage_01081.pdb 1 --TEIRLEQNTIKVIPPGAFS-PYKKLRRI----DL 29 usage_01128.pdb 1 --KILRLENNNLESLVPDMFS-SLQSLQVF----SL 29 usage_01196.pdb 1 --KELALDTNQLKSVPDGIFD-RLTSLQKI----WL 29 usage_01198.pdb 1 --KELALDTNQLKSVPDGIFD-RLTSLQKI----WL 29 usage_01199.pdb 1 --KELALDTNQLKSVPDGIFD-RLTSLQKI----WL 29 usage_01418.pdb 1 --TELYLDGNQFTLVPKELSN--YKHLTLI----DL 28 usage_01684.pdb 1 --QRLYLQMNFINQAQLGIFK-DFPGLRYI----DL 29 usage_02451.pdb 1 GR--------ITYKTDEFGIAK-SNWLRCAERVH-L 26 usage_02487.pdb 1 --KQLNLASNQLKSVPDGIFD-RLTSLQKI----WL 29 usage_02730.pdb 1 --TDLRLASNQLKSVPDGIFD-RLTSLQKI----WL 29 usage_03484.pdb 1 --KDLRLYQNQLKSVPDGVFD-RLTSLQYI----WL 29 usage_03853.pdb 1 --LSLDLSNNRLTHLPDSLFA-HTTNLTDL----RL 29 usage_03978.pdb 1 --KKLDLQSNKLSSLPSKAFH-RLTKLRLL----YL 29 L l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################