################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:36 2021 # Report_file: c_1266_83.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00399.pdb # 2: usage_00400.pdb # 3: usage_00647.pdb # 4: usage_00691.pdb # 5: usage_00823.pdb # 6: usage_01171.pdb # 7: usage_01172.pdb # 8: usage_01427.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 42 ( 11.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 42 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00399.pdb 1 A-NVLRT----PDAEMIVKAVARV-AESGGGRGA-IARGL-- 33 usage_00400.pdb 1 A-NVLRT----PDAEMIVKAVARV-AESGGGRGA-IARGL-- 33 usage_00647.pdb 1 A-NVLRT----PDAEMIVKAVARV-AESGGGRGA-IARGL-- 33 usage_00691.pdb 1 --GVGCD----PDSETAVMRLLEL-K---QRPVDKGLILIAA 32 usage_00823.pdb 1 --NVLRT----PDAEMIVKAVARV-AESGGGRGA-IARGL-- 32 usage_01171.pdb 1 A-NVLRT----PDAEMIVKAVARV-AESGRG--A-IARGL-- 31 usage_01172.pdb 1 A-NVLRT----PDAEMIVKAVARV-AESGRG--A-IARGL-- 31 usage_01427.pdb 1 MWVYRLKGTLEALDPILPGLFDGGA--------R-GLWER-- 31 v pd e v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################