################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:50 2021 # Report_file: c_0207_10.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00057.pdb # 7: usage_00061.pdb # 8: usage_00069.pdb # 9: usage_00099.pdb # 10: usage_00127.pdb # 11: usage_00129.pdb # 12: usage_00130.pdb # 13: usage_00170.pdb # 14: usage_00171.pdb # 15: usage_00172.pdb # 16: usage_00177.pdb # 17: usage_00178.pdb # 18: usage_00179.pdb # 19: usage_00180.pdb # 20: usage_00181.pdb # 21: usage_00217.pdb # 22: usage_00218.pdb # 23: usage_00219.pdb # # Length: 128 # Identity: 21/128 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/128 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/128 ( 21.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTNTGEPT 58 usage_00002.pdb 1 --IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLEWMGWINTNTGEPT 58 usage_00007.pdb 1 --VQLQQPGAELVKPGASVRMSCKASGYTFTNYNMYWVKQSPGQGLEWIGIFYPGNGDTS 58 usage_00008.pdb 1 ---QLQQSGPELVKPGASVKISCKDSGYAFNSSWMNWVKQRPGQGLEWIGRIYPGDGDSN 57 usage_00009.pdb 1 ---QLQQSGPELVKPGASVKISCKDSGYAFNSSWMNWVKQRPGQGLEWIGRIYPGDGDSN 57 usage_00057.pdb 1 --VQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGGINPNNGGTS 58 usage_00061.pdb 1 --VQLQQSGPELVKPGASVKISCKASGYSFIGYYIHWVKQSPEKSLEWIGEINPRTGDTT 58 usage_00069.pdb 1 --VHLQQSGAELMKPGASVKISCKASGYTFITYWIEWVKQRPGHGLEWIGDILPGSGSTN 58 usage_00099.pdb 1 --VQLQQSGPELVKPGTSVKMSCKASGYTFTDYYMHWVKQSHGKSLEWIGYIYPNNGGNG 58 usage_00127.pdb 1 --VQLLESGPELVRLGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGDAS 58 usage_00129.pdb 1 --VQLQQSGAELVRPGVSVKISCKGSGYTFTDYGMHWVKQSHAKSLEWIGIISTYSGDAS 58 usage_00130.pdb 1 --VQLQQSGAELVRPGVSVKISCKGSGYTFTDYGMHWVKQSHAKSLEWIGIISTYSGDAS 58 usage_00170.pdb 1 QVQLQESGAELVKP-GASVKLSCKASGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTK 59 usage_00171.pdb 1 --QLQESGAELVKP-GASVKLSCKASGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTK 57 usage_00172.pdb 1 --FQLQQSGPELVKPGASVKISCKASGYSFTDYNINWMKQSNGKSLEWIGVVIPKYGTTN 58 usage_00177.pdb 1 --VQLQQSGPELVRPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTS 58 usage_00178.pdb 1 --VQLQQSGPELVRPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTS 58 usage_00179.pdb 1 --VQLQQSGPELVRPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTS 58 usage_00180.pdb 1 --VQLQQSGPELVRPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTS 58 usage_00181.pdb 1 --VQLQQSGPELVRPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTS 58 usage_00217.pdb 1 --VQLQQSGPEDVKPGASVKISCKASGYTFTDYYMNWVKQSPGKGLEWIGDINPNNGGTS 58 usage_00218.pdb 1 --VQLQQSGPEDVKPGASVKISCKASGYTFTDYYMNWVKQSPGKGLEWIGDINPNNGGTS 58 usage_00219.pdb 1 --VQLQQSGPEDVKPGASVKISCKASGYTFTDYYMNWVKQSPGKGLEWIGDINPNNGGTS 58 G k SCK SGY F WvKQ LeW G G usage_00001.pdb 59 YGEEFKGRFAFSLETSASTANLQINNLKNEDTATFFCARG-E-DN-F-G-SL--SDYWGQ 111 usage_00002.pdb 59 YGEEFKGRFAFSLETSASTANLQINNLKNEDKATFFCARG-E-DN-F-G-SL--SDYWGQ 111 usage_00007.pdb 59 YNQKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYYCARS-G-GSYRYD-GG--FDYWGQ 113 usage_00008.pdb 58 YNGKFEGKAILTADKSSSTAYMQLSSLTSVDSAVYFCARS-G-LL---R-YA--MDYWGQ 109 usage_00009.pdb 58 YNGKFEGKAILTADKSSSTAYMQLSSLTSVDSAVYFCARS-G-LL---R-YA--MDYWGQ 109 usage_00057.pdb 59 YNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARN-D-GY-R-G-YA--MDYWGQ 111 usage_00061.pdb 59 YNQKFKAKATLTVDKSSSTAYMQLTSLTSEDSAVYYCTKR-I-N------WA--LDYWGQ 108 usage_00069.pdb 59 YNENFKGKATFTADSSSNTAYMQLSSLTSEDSAVYYCARS-G-YY-G-N-SG--FAYWGQ 111 usage_00099.pdb 59 YNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARR-G-GY-G-SRGY--FDVWGT 112 usage_00127.pdb 59 YNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARTGY-YY---G-RSYA------ 107 usage_00129.pdb 59 YNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARS-S-TW-----YY--FDYWGQ 109 usage_00130.pdb 59 YNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARS-S-TW-----YY--FDYWGQ 109 usage_00170.pdb 60 FNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE-DDYDGT-P-DA--MDYWGQ 114 usage_00171.pdb 58 FNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE-DDYDGT-P-DA--MDYWGQ 112 usage_00172.pdb 59 YNQKFQGKATLTVDQSSSTAYIQLNSLTSEDSAVYYCTRF-R-D------VF--FDVWGT 108 usage_00177.pdb 59 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARD-G-DYYRYG-RY--FDYWGQ 113 usage_00178.pdb 59 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARD-G-DYYRYG-RY--FDYWGQ 113 usage_00179.pdb 59 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARD-G-DYYRYG-RY--FDYWGQ 113 usage_00180.pdb 59 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARD-G-DYYRYG-RY--FDYWGQ 113 usage_00181.pdb 59 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARD-G-DYYRYG-RY--FDYWGQ 113 usage_00217.pdb 59 YNQKFKGRATLTVDKSSSTAYMELRSLTSEDSSVYYCAASSP-YS---M-RAA-MDYWGQ 112 usage_00218.pdb 59 YNQKFKGRATLTVDKSSSTAYMELRSLTSEDSSVYYCAASSP-YS---M-RAA-MDYWGQ 112 usage_00219.pdb 59 YNQKFKGRATLTVDKSSSTAYMELRSLTSEDSSVYYCAASSP-YS---M-RAA-MDYWGQ 112 F S T L D C usage_00001.pdb 112 GTTVTVS- 118 usage_00002.pdb 112 GTTLTVS- 118 usage_00007.pdb 114 GTTLT--- 118 usage_00008.pdb 110 GTSVTVSS 117 usage_00009.pdb 110 GTSVTVSS 117 usage_00057.pdb 112 GTSVT--- 116 usage_00061.pdb 109 GTTLTVS- 115 usage_00069.pdb 112 GTLVTVS- 118 usage_00099.pdb 113 GTTVTVS- 119 usage_00127.pdb -------- usage_00129.pdb 110 GTTLTVS- 116 usage_00130.pdb 110 GTTLTVS- 116 usage_00170.pdb 115 GTAVTVS- 121 usage_00171.pdb 113 GTAVTVS- 119 usage_00172.pdb 109 GTTVTVS- 115 usage_00177.pdb 114 GTTLTVS- 120 usage_00178.pdb 114 GTTLTVS- 120 usage_00179.pdb 114 GTTLTVS- 120 usage_00180.pdb 114 GTTLTVS- 120 usage_00181.pdb 114 GTTLTVS- 120 usage_00217.pdb 113 GTTVTVSA 120 usage_00218.pdb 113 GTTVTVSA 120 usage_00219.pdb 113 GTTVTVSA 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################