################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:44 2021 # Report_file: c_0464_26.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00309.pdb # 2: usage_00945.pdb # 3: usage_00946.pdb # 4: usage_00948.pdb # 5: usage_00949.pdb # 6: usage_00950.pdb # 7: usage_01215.pdb # # Length: 85 # Identity: 13/ 85 ( 15.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 85 ( 30.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 85 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00309.pdb 1 -SPVMAHAEEELEEMIRLAD-AVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGA 57 usage_00945.pdb 1 -SPIMSEIQSEVNDLAAIPHATLLLNTGSVA---PPEMLKAAIRAYNDVKRPIVFDPVGY 56 usage_00946.pdb 1 SSPIMSEIQSEVNDLAAIPHATLLLNTGSVA---PPEMLKAAIRAYNDVKRPIVFDP--S 55 usage_00948.pdb 1 SSPIMSEIQSEVNDLAAIPHATLLLNTGSVA---PPEMLKAAIRAYNDVKRPIVFDPVGY 57 usage_00949.pdb 1 SSPIMSEIQSEVNDLAAIPHATLLLNTGSVA---PPEMLKAAIRAYNDVKRPIVFDPV-G 56 usage_00950.pdb 1 SSPIMSEIQSEVNDLAAIPHATLLLNTGSVA---PPEMLKAAIRAYNDVKRPIVFDPV-G 56 usage_01215.pdb 1 --PVMAYAKEEVADMAKIAG-ALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGA 56 P M Ev d a i l lN G e A N Piv DP usage_00309.pdb 58 GATKFRTRVSLEILSRGVDVLKGN- 81 usage_00945.pdb 57 SATETRLLLNNKLLTFGQFSCIKGN 81 usage_00946.pdb 56 -ATETRLLLNNKLLTFGQFSCIKGN 79 usage_00948.pdb 58 SATETRLLLNNLLLTFGQFSCIKGN 82 usage_00949.pdb 57 -ATETRLLLNNKLLTFGQFSCIKGN 80 usage_00950.pdb 57 -ATETRLLLNNKLLTFGQFSCIKGN 80 usage_01215.pdb 57 GATPFRTESARDIIREVRLAAIRGN 81 AT R l g i g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################