################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:26 2021 # Report_file: c_0080_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00023.pdb # 3: usage_00058.pdb # 4: usage_00063.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00089.pdb # # Length: 199 # Identity: 13/199 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/199 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/199 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SAEAIELAYRRVKAVRDAAGPEIEL-VDLSGGLTTDETIRFCRKIG-ELDICFVEEPCDP 58 usage_00023.pdb 1 -MTDISQSVAFCKAIRAAVGDKADLLFGTHGQFTTAGAIRLGNAIA-PYSPLWYEEPIPP 58 usage_00058.pdb 1 ---SFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEPLPF 57 usage_00063.pdb 1 ----GALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFE-PFNLVWIEEPLDA 55 usage_00086.pdb 1 SLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLE-KYDPLWFEEPVPP 59 usage_00087.pdb 1 SLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLE-AYDPLWFEEPIPP 59 usage_00088.pdb 1 SLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLE-AYDPLWFEEPIPP 59 usage_00089.pdb 1 SLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLE-AYDPLWFEEPIPP 59 r G l a r w EEP usage_00001.pdb 59 FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGL-ETKKICA- 116 usage_00023.pdb 59 DAVEQMAAVARAVPIPVATGERLTTKAEFAPVLRSGAAAILQPALGRVGGIWEAKKIAAM 118 usage_00058.pdb 58 DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQL 117 usage_00063.pdb 56 YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASL 115 usage_00086.pdb 60 GQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATL 119 usage_00087.pdb 60 EKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAM 119 usage_00088.pdb 60 EKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAM 119 usage_00089.pdb 60 EKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAM 119 a P A GE i q vgG e ki usage_00001.pdb 117 AEAY-NRVAPHVCGSSLIE-TATLQLEANITN--------FI-HEHYP----AFKADDGY 161 usage_00023.pdb 119 AEVYNAQIAPHLYAGPVEW-AANIHLAASIPN--------ILMCECIE--T-PFHD---- 162 usage_00058.pdb 118 ARYFGVRASAHAYDGSLSR-LYALFAQACLPPWSKMKNDHIEPIEWDV--MENPFT---- 170 usage_00063.pdb 116 AEHAGLMLAPHF------AMELHVHLAAAYPR--------EPWVEHFE-----WLE---- 152 usage_00086.pdb 120 AEVHYAQIAPHLYNGPVGA-AASIQLATCTPN--------FLIQESIMTWG-GFHA---- 165 usage_00087.pdb 120 AECHSAQIAPHLYCGPLVA-LANIQLATCSPN--------FLVLESIRTFD-GFFA---- 165 usage_00088.pdb 120 AECHSAQIAPHLYCGPLVA-LANIQLATCSPN--------FLVLESIRTFD-GFFA---- 165 usage_00089.pdb 120 AECHSAQIAPHLYCGPLVA-LANIQLATCSPN--------FLVLESIRTFD-GFFA---- 165 Ae apH l p E usage_00001.pdb 162 VEVLENPPSISSGYFEP-- 178 usage_00023.pdb 163 -QLIKSTIKVEDGFITAPT 180 usage_00058.pdb 171 -DLV--SLQPSKGMVHIPK 186 usage_00063.pdb 153 -PLFNERIEIRDGRMLVP- 169 usage_00086.pdb 166 -EVVKTPIRWEDGYIIPS- 182 usage_00087.pdb 166 -ELLTTPIRWENGYIIPS- 182 usage_00088.pdb 166 -ELLTTPIRWENGYIIPSQ 183 usage_00089.pdb 166 -ELLTTPIRWENGYIIPSQ 183 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################