################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:20 2021 # Report_file: c_1489_326.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00007.pdb # 2: usage_00044.pdb # 3: usage_00149.pdb # 4: usage_00241.pdb # 5: usage_00791.pdb # 6: usage_00792.pdb # 7: usage_02118.pdb # 8: usage_02119.pdb # 9: usage_02299.pdb # 10: usage_02301.pdb # 11: usage_02302.pdb # 12: usage_02685.pdb # 13: usage_02865.pdb # 14: usage_02893.pdb # 15: usage_03008.pdb # 16: usage_03132.pdb # 17: usage_03333.pdb # 18: usage_03344.pdb # 19: usage_03345.pdb # 20: usage_03346.pdb # 21: usage_03347.pdb # 22: usage_04082.pdb # 23: usage_04207.pdb # 24: usage_04208.pdb # # Length: 45 # Identity: 23/ 45 ( 51.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 45 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 45 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 IQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLE---- 41 usage_00044.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQK 44 usage_00149.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIE---- 40 usage_00241.pdb 1 IQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLE---- 41 usage_00791.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYIETL--------- 35 usage_00792.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYIETL--------- 35 usage_02118.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQ- 43 usage_02119.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQ- 43 usage_02299.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQ-------- 36 usage_02301.pdb 1 -PKTIQMVRSQRSGMVQTEAEYRFIYMAVQHYIETLQRR------ 38 usage_02302.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 usage_02685.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 36 usage_02865.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRR------ 39 usage_02893.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQ-------- 37 usage_03008.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQR------- 38 usage_03132.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQ-------- 37 usage_03333.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 usage_03344.pdb 1 -PKTIQMVRSQRPGMVQTEAQYRFIYMAVQHYIET---------- 34 usage_03345.pdb 1 -PKTIQMVRSQRPGMVQTEAQYRFIYMAVQHYIET---------- 34 usage_03346.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 usage_03347.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 usage_04082.pdb 1 VPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIET---------- 35 usage_04207.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 usage_04208.pdb 1 -PKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL--------- 35 KTIQMVR QR GMVQTEAqY IY A IET #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################