################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:32:00 2021 # Report_file: c_0147_15.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00006.pdb # 2: usage_00028.pdb # 3: usage_00093.pdb # 4: usage_00101.pdb # 5: usage_00155.pdb # 6: usage_00176.pdb # 7: usage_00180.pdb # 8: usage_00236.pdb # 9: usage_00237.pdb # 10: usage_00239.pdb # 11: usage_00244.pdb # 12: usage_00294.pdb # 13: usage_00298.pdb # 14: usage_00336.pdb # 15: usage_00373.pdb # 16: usage_00402.pdb # 17: usage_00433.pdb # 18: usage_00470.pdb # 19: usage_00471.pdb # 20: usage_00489.pdb # 21: usage_00490.pdb # 22: usage_00506.pdb # 23: usage_00507.pdb # 24: usage_00508.pdb # 25: usage_00588.pdb # 26: usage_00634.pdb # 27: usage_00638.pdb # 28: usage_00639.pdb # 29: usage_00674.pdb # 30: usage_00734.pdb # 31: usage_00737.pdb # 32: usage_00753.pdb # 33: usage_00757.pdb # # Length: 133 # Identity: 56/133 ( 42.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/133 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/133 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 59 usage_00028.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNISSYSIHWVRQAPGKGLEWVASISSYYSSTYY 58 usage_00093.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFSFTSSSVSWVRQAPGKGLEWVGLIYPYNGFNYY 58 usage_00101.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNLYYYSIHWVRQAPGKGLEWVASISPYSSSTSY 58 usage_00155.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSNTYISWVRQAPGKGLEWVASITPSSGQTDY 58 usage_00176.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGYTFTSYWLHWVRQAPGKGLEWVGMIDPSNSDTRF 59 usage_00180.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFNISSYSMHWVRQAPGKGLEWVASIYPYSGYTYY 60 usage_00236.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYY 58 usage_00237.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYY 58 usage_00239.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTISSSSIHWVRQAPGKGLEWVAWVLPSVGFTDY 59 usage_00244.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFTDYTMDWVRYAPGKGLEWVADVNPNSGGSIY 59 usage_00294.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIY 59 usage_00298.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGYTFTSYVIHWVRQAPGKGLEWVGYNNPYNAGTNY 59 usage_00336.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVASISSYYGSTSY 58 usage_00373.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSSYWIHWVRQAPGKGLEWVARINPPNRSNQY 59 usage_00402.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRY 59 usage_00433.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFSIWWSWIHWVRQAPGKGLEWVASISPSSGWTSY 59 usage_00470.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYTSY 59 usage_00471.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYTSY 58 usage_00489.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTLSGDWIHWVRQAPGKGLEWLGEISAAGGYTDY 58 usage_00490.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTLSGDWIHWVRQAPGKGLEWLGEISAAGGYTDY 59 usage_00506.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNLSSSYMHWVRQAPGKGLEWVASISSSYGSTYY 59 usage_00507.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNLSSSYMHWVRQAPGKGLEWVASISSSYGSTYY 59 usage_00508.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNLSSSYMHWVRQAPGKGLEWVASISSSYGSTYY 59 usage_00588.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVSSSSIHWVRQAPGKGLEWVASISSYYGYTSY 59 usage_00634.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYY 58 usage_00638.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIY 59 usage_00639.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIY 59 usage_00674.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFTDYTMDWVRQAPGKGLEWVADVNPNSGGSIY 59 usage_00734.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSSGSTSY 59 usage_00737.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYISPYYGSTSY 59 usage_00753.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVSSSSIHWVRQAPGKGLEWVASISSYYGYTSY 59 usage_00757.pdb 1 -VQLVESGGGLVHPGGSLRLSCAASG-----HAVAWFRQAPGKERDFVASINAVG-LVRN 53 QLVESGGGLVqPGGSLRLSCAASG WvR APGKg ew usage_00006.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG----D----------GFYA 105 usage_00028.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQPS----Y-H---M-YSWW-VA 108 usage_00093.pdb 59 ADSVKGRFTISANTSKNTAYLQMNSLRAEDTAVYYCARNAL----YGS-GG-----Y-YA 107 usage_00101.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGRW----Y----------R-RA 103 usage_00155.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWL----L----------R-WV 103 usage_00176.pdb 60 NPNFKDRFTISADTSKNTAYLQMNSLRAEDTAVYYCATYRS----Y----------V-TP 104 usage_00180.pdb 61 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYVY-----------------HA 103 usage_00236.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-R---R-S--G-RG 106 usage_00237.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGY----R-R---R-S--G-RG 106 usage_00239.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRVC----YNRLGVC----A-GG 110 usage_00244.pdb 60 NQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLG----P----------S-FY 104 usage_00294.pdb 60 DPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARDTA-----------------AY 102 usage_00298.pdb 60 NEKFKGRFTISSDKSKNTAYLQMNSLRAEDTAVYYCSRPTM----L------------PW 103 usage_00336.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDRVMYYWSFSKYGY----P-YG 113 usage_00373.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSG----F----------R-WV 104 usage_00402.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGG-----------------YA 102 usage_00433.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWWS-----------------SA 102 usage_00470.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----T----------K-LA 104 usage_00471.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----T----------K-LA 103 usage_00489.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARESR----VS------F--E-AA 105 usage_00490.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARESR----VS------F--E-AA 106 usage_00506.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTVR----GSKKPYF-S--G-WA 111 usage_00507.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTVR----GSKKPYF-S--G-WA 111 usage_00508.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTVR----GSKKPYF-S--G-WA 111 usage_00588.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----W----------S-YA 104 usage_00634.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWY-----------------YG 101 usage_00638.pdb 60 DPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARDTA-----------------AY 102 usage_00639.pdb 60 DPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARDTA-----------------AY 102 usage_00674.pdb 60 NQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLG----P----------S-FY 104 usage_00734.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLTAEDTAVYYCARGYY--YTGLWYPYAMY--E-FG 114 usage_00737.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAREYY----R----------WYTA 105 usage_00753.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYS----W----------S-YA 104 usage_00757.pdb 54 ---VLGRFSISRDFAKNEVYLQMNSLEPEDTAVYYCAARYY------------------- 91 R t S d sKNt YLQMNSL aEDTAVYYC usage_00006.pdb 106 MDYWGQGTLVTVS 118 usage_00028.pdb 109 LDYWGQGTLVTVS 121 usage_00093.pdb 108 MDYWGQGTLVTV- 119 usage_00101.pdb 104 LDYWGQGTLVTVS 116 usage_00155.pdb 104 MDLWGQGTLVTV- 115 usage_00176.pdb 105 LDYWGQGTLVTV- 116 usage_00180.pdb 104 LDYWGQGTLVTVS 116 usage_00236.pdb 107 FDYWGQGTLVTVS 119 usage_00237.pdb 107 FDYWGQGTLVTVS 119 usage_00239.pdb 111 MDYWGQGTLVTV- 122 usage_00244.pdb 105 FDYWGQGTLVTVS 117 usage_00294.pdb 103 FDYWGQGTLVTVS 115 usage_00298.pdb 104 FAYWGQGTLVTVS 116 usage_00336.pdb 114 MDYWGQGTLVTV- 125 usage_00373.pdb 105 MDYWGQGTLVTVS 117 usage_00402.pdb 103 MDYWGQGTLVTVS 115 usage_00433.pdb 103 MDYWGQGTLVTV- 114 usage_00470.pdb 105 MDYWGQGTLVTVS 117 usage_00471.pdb 104 MDYWGQGTLVTVS 116 usage_00489.pdb 106 MDYWGQGTLVTVS 118 usage_00490.pdb 107 MDYWGQGTLVTVS 119 usage_00506.pdb 112 MDYWGQGTLVTV- 123 usage_00507.pdb 112 MDYWGQGTLVTVS 124 usage_00508.pdb 112 MDYWGQGTLVTVS 124 usage_00588.pdb 105 IDYWGQGTLVTVS 117 usage_00634.pdb 102 FDYWGQGTLVTVS 114 usage_00638.pdb 103 FDYWGQGTLVTVS 115 usage_00639.pdb 103 FDYWGQGTLVTVS 115 usage_00674.pdb 105 FDYWGQGTLVTVS 117 usage_00734.pdb 115 MDYWGQGTLVTV- 126 usage_00737.pdb 106 IDYWGQGTLVTVS 118 usage_00753.pdb 105 IDYWGQGTLVTVS 117 usage_00757.pdb 92 YDYWGQGTQVTVS 104 dyWGQGTlVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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