################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:31 2021 # Report_file: c_1180_197.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00981.pdb # 2: usage_01139.pdb # 3: usage_01661.pdb # 4: usage_01763.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 63 ( 7.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 63 ( 65.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00981.pdb 1 SL----LGCSINISDIRDL-EAITFKNLVR-GHA-YSVTDAKQVTYQ---GQRVNLIRMR 50 usage_01139.pdb 1 -L----LGCSIDISSVLD-MEAITFKKLVK-GHA-YSVTGAKQVNYR---GQVVSLIRMR 49 usage_01661.pdb 1 RRVSVR------P-----------------PGVREGSVIRV--PGGGQGNP-PGDLLLVV 34 usage_01763.pdb 1 ------SPIIDKK-----------------GKVV-GLYGNG--VVTRS----GAYVSAIA 30 g sv v l usage_00981.pdb --- usage_01139.pdb --- usage_01661.pdb 35 RLP 37 usage_01763.pdb 31 -QT 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################