################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:47:30 2021 # Report_file: c_0419_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00011.pdb # 2: usage_00064.pdb # 3: usage_00087.pdb # 4: usage_00128.pdb # 5: usage_00167.pdb # 6: usage_00172.pdb # 7: usage_00173.pdb # 8: usage_00176.pdb # 9: usage_00228.pdb # 10: usage_00276.pdb # 11: usage_00278.pdb # 12: usage_00294.pdb # 13: usage_00466.pdb # 14: usage_00566.pdb # 15: usage_00679.pdb # 16: usage_00693.pdb # 17: usage_00726.pdb # # Length: 88 # Identity: 11/ 88 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 88 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 88 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 46 usage_00064.pdb 1 NQVSLTCLVKGFYPSDIAVEWESNGQPEN--NYKTTPPVLVS--DGSFTLYSKLTVDKSR 56 usage_00087.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 46 usage_00128.pdb 1 --RTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTK--GSGFFVFSRLEVTRAE 56 usage_00167.pdb 1 DKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTK--GSGFFVFSRLEVTRAE 58 usage_00172.pdb 1 ESATVTCLVKGFSPADISVQWLQRGQLLPQEKYVTSAPMPEPGAPGFYFTHSILTVTEEE 60 usage_00173.pdb 1 ESATVTCLVKGFSPADISVQWLQRGQLLPQEKYVTSAPMPEPGAPGFYFTHSILTVTEEE 60 usage_00176.pdb 1 NQVSLTCLVKGFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 56 usage_00228.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 46 usage_00276.pdb 1 DKVSLTCMITDFFPEDITVEWQSDGQAPE--NYKNTQPIMDT--DGSYFVYSKLNVQKSN 56 usage_00278.pdb 1 DKVSLTCMITDFFPEDITVEWQSDGQAPE--NYKNTQPIMDT--DGSYFVYSKLNVQKSN 56 usage_00294.pdb 1 NQVSLTCLVKGFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 56 usage_00466.pdb 1 NQVSLTCLVKGFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 56 usage_00566.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 46 usage_00679.pdb 1 NQVSLTCLVKGFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSKLTVDKSR 56 usage_00693.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKATPPVLDS--DGSFFLYSKLTVDKSR 46 usage_00726.pdb 1 ----------GFYPSDIAVEWESNGQPEN--NYKTTPPVLDS--DGSFFLYSFLTVDKSR 46 F P DI V W P f S L V usage_00011.pdb 47 WQQGNVFSCSVMHEALHN-HYTQKSLSL 73 usage_00064.pdb 57 WQQGNVFSCSVMHEALHN-HYTQKSLSL 83 usage_00087.pdb 47 WQQGNVFSCSVMHEALHN-HYTQKSLSL 73 usage_00128.pdb 57 WEQKDEFICRAVHEAASPSQTVQRAVSV 84 usage_00167.pdb 59 WEQKDEFICRAVHEAASPSQTVQRAVSV 86 usage_00172.pdb 61 WNSGETYTCVVGHEALPH-LVTERTVDK 87 usage_00173.pdb 61 WNSGETYTCVVGHEALPH-LVTERTVDK 87 usage_00176.pdb 57 WQQGNVFSCSVMHEALHN-HYTQKSLSL 83 usage_00228.pdb 47 WQQGNVFSCSVMHEALHN-HYTQKSLS- 72 usage_00276.pdb 57 WEAGNTFTCSVLHEGLHN-HHTEKSLSH 83 usage_00278.pdb 57 WEAGNTFTCSVLHEGLHN-HHTEKSLSH 83 usage_00294.pdb 57 WQQGNVFSCSVMHEALHN-HYTQKSLSL 83 usage_00466.pdb 57 WQQGNVFSCSVMHEALHN-HYTQKSLSL 83 usage_00566.pdb 47 WQQGNVFSCSVMHEALHN-HYTQKSLS- 72 usage_00679.pdb 57 WQQGNVFSCSVMHEALHN-HYTQKSLSL 83 usage_00693.pdb 47 WQQGNVFSCSVMHEALHN-HYTQKSLSL 73 usage_00726.pdb 47 WQQNVFSCSVMHEALHN--AYTQKSLSL 72 W c he #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################