################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:24 2021 # Report_file: c_1115_137.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00188.pdb # 2: usage_00827.pdb # 3: usage_00828.pdb # 4: usage_01169.pdb # # Length: 66 # Identity: 6/ 66 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 66 ( 53.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 66 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 -LVSFLTGLG--CPNCIEYFTSQGLQSIYHLQNLTIEDLGAL-KIPEQYRMTIWRGLQDL 56 usage_00827.pdb 1 SIVSFLARLG--CSSCLDYFTTQGLTTIYQIEHYSMDDLASL-KIPEQFRHAIWKGILDH 57 usage_00828.pdb 1 SIVSFLARLG--CSSCLDYFTTQGLTTIYQIEHYSMDDLASL-KIPEQFRHAIWKGILDH 57 usage_01169.pdb 1 -GYRLLKTVARIPLSIGYNVVRM-FKTLDQISKASVEDLKKVEGIGEKRARAISESISSL 58 vsfL lg c sc yft q l tiyqi s DL l kIpEq r aIw gi d usage_00188.pdb 57 K----- 57 usage_00827.pdb 58 RQLHE- 62 usage_00828.pdb 58 RQLHEF 63 usage_01169.pdb 59 KHRKT- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################