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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:15:50 2021
# Report_file: c_0505_51.html
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#====================================
# Aligned_structures: 5
#   1: usage_00222.pdb
#   2: usage_00223.pdb
#   3: usage_00291.pdb
#   4: usage_00292.pdb
#   5: usage_00293.pdb
#
# Length:        104
# Identity:       42/104 ( 40.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     42/104 ( 40.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/104 ( 21.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00222.pdb         1  -RAEAAVAYAWEKGLLDGAIVGVGNAPTFLLALVEAIRQ-GARPALVLGMPVGFVNVLEA   58
usage_00223.pdb         1  -RAEAAVAYAWEKGLLDGAIVGVGNAPTFLLALVEAIRQ-GARPALVLGMPVGFVNVLEA   58
usage_00291.pdb         1  TRAIESIQKANSFNLLNESIIVIGNAPTALLEIEKLIRQEGIKPALIVGVPVGFVSAKES   60
usage_00292.pdb         1  -RAIESIQKANSFNLLNESIIVIGNAPTALLEIEKLIRQEGIKPALIVGVPVGFVSAKES   59
usage_00293.pdb         1  -------------NLLNESIIVIGNAPTALLEIEKLIRQEGIKPALIVGVPVGFVSAKES   47
                                         LL   I   GNAPT LL     IRQ G  PAL  G PVGFV   E 

usage_00222.pdb        59  KRALMEA-----P-VPWIVTEGRKGGSTLVVAALHALIRLAADG   96
usage_00223.pdb        59  KRALMEA-----P-VPWIVTEGRKGGSTLVVAALHALIRLAADG   96
usage_00291.pdb        61  KESILKLEYYNVTSIPYILTMGRKGGSTIAVAILHALLLLSSKR  104
usage_00292.pdb        60  KESILKLEYYNVTSIPYILTMGRKGGSTIAVAILHALLLLSS--  101
usage_00293.pdb        48  KESILKLEYYNVTSIPYILTMGRKGGSTIAVAILHALLLLSSK-   90
                           K              P I T GRKGGST  VA LHAL  L    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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