################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:25 2021 # Report_file: c_1115_148.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00465.pdb # 2: usage_00466.pdb # 3: usage_01125.pdb # 4: usage_01583.pdb # # Length: 87 # Identity: 1/ 87 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 87 ( 19.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 87 ( 56.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00465.pdb 1 ---EAKKLVEELISL-G-IDEKT--AVKIADILPE----------------DLDDLRAIY 37 usage_00466.pdb 1 -KEEAKKLVEELISL-G-IDEKT--AVKIADILPE----------------DLDDLRAIY 39 usage_01125.pdb 1 KPEQARELKEKLMGLFDWINERI--AAKLVDILPE----------------DYLDIRVIF 42 usage_01583.pdb 1 ---SPPAFLASD-----------ILPLGARLRV--AGELFSRRAPEGVDESLAAFGRRHL 44 a l e l a k dil d d R i usage_00465.pdb 38 YKR-ELP--E----NAEEILEIVRKY- 56 usage_00466.pdb 40 YKR-ELP--E----NAEEILEIVRKYI 59 usage_01125.pdb 43 AKEEYMPTPE----EAEEIIKVIDEYR 65 usage_01583.pdb 45 G---------HRATQVLLDAVQTGI-- 60 aeei #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################