################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:02 2021 # Report_file: c_1404_82.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00082.pdb # 2: usage_00083.pdb # 3: usage_00119.pdb # 4: usage_00120.pdb # 5: usage_00121.pdb # 6: usage_00140.pdb # 7: usage_00286.pdb # 8: usage_00287.pdb # 9: usage_00288.pdb # 10: usage_00445.pdb # # Length: 60 # Identity: 1/ 60 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 60 ( 5.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 60 ( 68.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 -LRFLQLPNTLSKLLEKFGEITN-KL-G----------------PMLNSFM--------- 32 usage_00083.pdb 1 -LRFLQLPNTLSKLLEKFGEITN-KL-G----------------PMLNSFMG-------- 33 usage_00119.pdb 1 PTGHTLRFLQLPNTLSKLLEKFGK------------LNELKANVETIRQQF-------TD 41 usage_00120.pdb 1 -TGHTLRFLQLPNTLSKLLEKFG---------SGK-LNELKANVETIRQQF-------TD 42 usage_00121.pdb 1 PTGHTLRFLQLPNTLSKLLEKFG-EI-TNKDISGK-LNELKANVETIRQQF-------TD 50 usage_00140.pdb 1 -----SQA-EFDALTQKNDQLSK--L-F--ATYARTD-------TDILSQ--RLRSQQSG 40 usage_00286.pdb 1 PTGHTLRFLQLPNTLSKLLEKF---------ISGK-LNELKANVETIRQQF-------TD 43 usage_00287.pdb 1 PTGHTLRFLQLPNTLSKLLEKFG-EIV---DISGK-LNELKANVETIRQQF-------TD 48 usage_00288.pdb 1 PTGHTLRFLQLPNTLSKLLE------------SGK-LNELKANVETIRQQF-------TD 40 usage_00445.pdb 1 -TGHTLRFLQLPNTLSKLL------------ISGK-LNELKANVETIRQQF-------TD 39 l l K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################