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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:31:39 2021
# Report_file: c_1330_56.html
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#====================================
# Aligned_structures: 6
#   1: usage_00006.pdb
#   2: usage_00007.pdb
#   3: usage_00008.pdb
#   4: usage_00009.pdb
#   5: usage_00444.pdb
#   6: usage_00445.pdb
#
# Length:         74
# Identity:       37/ 74 ( 50.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/ 74 ( 50.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           10/ 74 ( 13.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00006.pdb         1  LCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEIKAIELA   60
usage_00007.pdb         1  LCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEIKAIELA   60
usage_00008.pdb         1  LCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEIKAIELA   60
usage_00009.pdb         1  LCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEIKAIELA   60
usage_00444.pdb         1  LCNFAMYLTLHTSATKGYPKIAGFIHVPYTPDQVLEKKN-----TPSMSLDLEIKGVEIA   55
usage_00445.pdb         1  LCNFAMYLTLHTSATKGYPKIAGFIHVPYTPDQVLEKKN-----TPSMSLDLEIKGVEIA   55
                           LCN  M  TLH S   GYP  AGFIHVPYTPDQV  K       TPSM L  EIK  E A

usage_00006.pdb        61  VKVSLDYLE-----   69
usage_00007.pdb        61  VKVSLDYLEKD---   71
usage_00008.pdb        61  VKVSLDYLE-----   69
usage_00009.pdb        61  VKVSLDYLE-----   69
usage_00444.pdb        56  IRVAQSALHSSQLR   69
usage_00445.pdb        56  IRVAQSALHSSQL-   68
                             V    L      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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