################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:40 2021 # Report_file: c_1341_86.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00086.pdb # 2: usage_00088.pdb # 3: usage_00158.pdb # 4: usage_00672.pdb # 5: usage_00673.pdb # # Length: 33 # Identity: 1/ 33 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 33 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 33 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 TREQQLEVT-GCR--TGQIRLLY-IAPERLL-- 27 usage_00088.pdb 1 TREQQLEVMTGCRTGQI--RLLYIA-PERLML- 29 usage_00158.pdb 1 SAKEQTQILAEVAEGKI--DILIGT-HKLLQSD 30 usage_00672.pdb 1 SAQERKELLADLEREKPQTKILY-ITPEMAAS- 31 usage_00673.pdb 1 SAQERKELLADLEREKPQTKILY-ITPEMAAS- 31 e Ly pe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################