################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:45 2021 # Report_file: c_0780_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00517.pdb # 2: usage_00518.pdb # 3: usage_00539.pdb # 4: usage_00688.pdb # 5: usage_00701.pdb # 6: usage_00702.pdb # 7: usage_00703.pdb # 8: usage_00731.pdb # # Length: 90 # Identity: 7/ 90 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 90 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 90 ( 34.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00517.pdb 1 DMLVASVGTGGTITGIARKLKEKCPG--CRIIGVDPEG------SILAEPEELNQTEQ-- 50 usage_00518.pdb 1 DMLVASVGTGGTITGIARKLKEKCPG--CRIIGVDPEG------SILAEPEELNQTEQ-- 50 usage_00539.pdb 1 DVVVAGVGTGGSITGISRAIKLDFGKQ-ITSVAVEPVE------SPVIS--QTLAGEEVK 51 usage_00688.pdb 1 THFVAGLGTTGTLMGTGRFLREHVAN--VKIVAAEPRYGEGVYALRNMDEG-F------- 50 usage_00701.pdb 1 DMIVVSAGTAGTISGIGRKIKEQVPS--CQIVGVDPYG------SILARPAELNKTDV-- 50 usage_00702.pdb 1 DMIVVSAGTAGTISGIGRKIKEQVPS--CQIVGVDPYG------SILARPAELNKTDV-- 50 usage_00703.pdb 1 DMIVVSAGTAGTISGIGRKIKEQVPS--CQIVGVDPYG------SILARPAELNKTDV-- 50 usage_00731.pdb 1 DVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTD------SPVIA--QALAGEEIK 52 d v GT Gt G R k v P s usage_00517.pdb 51 -TTYEVEGIGYDFIPTVLDRTVVDKWFKSN 79 usage_00518.pdb 51 -TTYEVEGIGYDFIPTVLDRTVVDKWFKSN 79 usage_00539.pdb 52 PGPHKIQGIGAGFIPKNLDLSIIDRVETVD 81 usage_00688.pdb 51 -----VP-------EL-YDPEILTARYSVG 67 usage_00701.pdb 51 -QFYEVEGIGYDFPPTVFDDTVVDVWTKIG 79 usage_00702.pdb 51 -QFYEVEGIGYDFPPTVFDDTVVDVWTKIG 79 usage_00703.pdb 51 -QFYEVEGIGYDFPPTVFDDTVVDVWTKIG 79 usage_00731.pdb 53 PGPHKIQGIGAGFIPANLDLKLVDKVIGIT 82 p D d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################