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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:52:41 2021
# Report_file: c_0209_16.html
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#====================================
# Aligned_structures: 8
#   1: usage_00087.pdb
#   2: usage_00088.pdb
#   3: usage_00180.pdb
#   4: usage_00181.pdb
#   5: usage_00182.pdb
#   6: usage_00183.pdb
#   7: usage_00296.pdb
#   8: usage_00297.pdb
#
# Length:        106
# Identity:       85/106 ( 80.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     85/106 ( 80.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            1/106 (  0.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00087.pdb         1  DIQMTQSSSSFSVSLGDRATITCKASEDIYNRIAWYQQKPGNVPRLLISGATSLETGVPS   60
usage_00088.pdb         1  DIQMTQSSSSFSVSLGDRATITCKASEDIYNRIAWYQQKPGNVPRLLISGATSLETGVPS   60
usage_00180.pdb         1  DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPS   60
usage_00181.pdb         1  DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPS   60
usage_00182.pdb         1  DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPS   60
usage_00183.pdb         1  DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPS   60
usage_00296.pdb         1  -IQVTQSSSSFSVSLGDRVTITCKASEDIYNRLAWYQQKPGNAPRLLISGATSLETGVPD   59
usage_00297.pdb         1  -IQVTQSSSSFSVSLGDRVTITCKASEDIYNRLAWYQQKPGNAPRLLISGATSLETGVPD   59
                            I  TQS S  SVSLG R TITCKAS  I N  AWYQQKPGN PRLLISGATSLETGVP 

usage_00087.pdb        61  RFSGSGSGKDYTLSITSLQTEDVATYYCQHYWSSPLTFGAGTKLEL  106
usage_00088.pdb        61  RFSGSGSGKDYTLSITSLQTEDVATYYCQHYWSSPLTFGAGTKLEL  106
usage_00180.pdb        61  RFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLEL  106
usage_00181.pdb        61  RFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLEL  106
usage_00182.pdb        61  RFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLEL  106
usage_00183.pdb        61  RFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLEL  106
usage_00296.pdb        60  RFSGSGSRKDYTLIITSLQTEDVATYYCQQYWSTPLTFGAGTKLEL  105
usage_00297.pdb        60  RFSGSGSRKDYTLIITSLQTEDVATYYCQQYWSTPLTFGAGTKLEL  105
                           RFSGSGS KD TL ITSLQTEDVATY CQ YWS PLTFGAGTKLEL


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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