################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:50 2021 # Report_file: c_0081_6.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00015.pdb # 2: usage_00023.pdb # 3: usage_00024.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # # Length: 221 # Identity: 85/221 ( 38.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/221 ( 38.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/221 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPT--AEPIDINAK- 57 usage_00023.pdb 1 AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMNAEPIDINAK- 59 usage_00024.pdb 1 AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMNAEPIDINAK- 59 usage_00031.pdb 1 AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ--YLPLDEAHPT 58 usage_00032.pdb 1 AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ--YLPLDEAHPT 58 AVGESV PL YY N G LL M H FSSSA GNP P D usage_00015.pdb 58 KSPESPYGESKLIAERMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQ-GSTHLIP 115 usage_00023.pdb 60 KSPESPYGESKLIAERMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQ-GSTHLIP 117 usage_00024.pdb 60 KSPESPYGESKLIAERMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQ-GSTHLIP 117 usage_00031.pdb 59 GGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMP 118 usage_00032.pdb 59 GGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMP 118 PYG SK E MIRD A LRYFN GAH G IGE Q L P usage_00015.pdb 116 IILGRVMSDIAPD--TDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGP 173 usage_00023.pdb 118 IILGRVMSDIAPD---DKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGP 174 usage_00024.pdb 118 IILGRVMSDIAPDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGP 177 usage_00031.pdb 119 YVSQVAIG----R---REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ-- 169 usage_00032.pdb 119 YVSQVAIG----R---REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ-- 169 FG DY T DGT VRDY HV DLA HI AL usage_00015.pdb 174 NDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRE-- 212 usage_00023.pdb 175 NDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG 215 usage_00024.pdb 178 NDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG 218 usage_00031.pdb 170 ----CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK--- 203 usage_00032.pdb 170 ----CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK--- 203 NLGT GYSV K G IP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################