################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:01 2021 # Report_file: c_0778_44.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00518.pdb # 2: usage_00543.pdb # 3: usage_00576.pdb # 4: usage_00577.pdb # 5: usage_00579.pdb # 6: usage_00580.pdb # 7: usage_00624.pdb # 8: usage_00625.pdb # 9: usage_00626.pdb # 10: usage_00627.pdb # 11: usage_00648.pdb # 12: usage_00796.pdb # 13: usage_00797.pdb # 14: usage_00798.pdb # 15: usage_00799.pdb # # Length: 69 # Identity: 46/ 69 ( 66.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 69 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 69 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00518.pdb 1 -GIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGG--DDTTRDLLLRFLALGVFT 56 usage_00543.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00576.pdb 1 -GIWMGANKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 58 usage_00577.pdb 1 -GIWMGANKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 58 usage_00579.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00580.pdb 1 -GIWM--GKSWWSHILLNLKMLPSLNMCGF-MYTGADLG----DTTRDLLLRFLALGVFT 52 usage_00624.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00625.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00626.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00627.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00648.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00796.pdb 1 -GIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 58 usage_00797.pdb 1 GGIWMGDNKSWWSHILLNLKMLPSLNMCGF-MYTGADLGGFGDDTTRDLLLRFLALGVFT 59 usage_00798.pdb 1 GGIW-GDNKSWWSHILLNLKL-PSLN-C--GFYTGADLGGFGDDTTRDLLLRFLALGVFT 55 usage_00799.pdb 1 GGIW-GDNKSWWSHILLNLKL-PSLN-C--GFYTGADLGGFGDDTTRDLLLRFLALGVFT 55 GIW nKSWWSHILLNLK PSLN C YTGADLG DTTRDLLLRFLALGVFT usage_00518.pdb 57 PLMRDHAA- 64 usage_00543.pdb 60 PLMRDHAAE 68 usage_00576.pdb 59 PLMRDHAAE 67 usage_00577.pdb 59 PLMRDHAAE 67 usage_00579.pdb 60 PLMRDHAA- 67 usage_00580.pdb 53 PLMRD---- 57 usage_00624.pdb 60 PLMRDHAA- 67 usage_00625.pdb 60 PLMRDHAA- 67 usage_00626.pdb 60 PLMRDHAA- 67 usage_00627.pdb 60 PLMRDHAA- 67 usage_00648.pdb 60 PLMRDHAA- 67 usage_00796.pdb 59 PLMRDHAA- 66 usage_00797.pdb 60 PLMRD---- 64 usage_00798.pdb 56 PLRDHAAE- 63 usage_00799.pdb 56 PLRDHAAE- 63 PL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################