################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:21 2021 # Report_file: c_1240_51.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_01433.pdb # 2: usage_01434.pdb # 3: usage_01435.pdb # 4: usage_01436.pdb # 5: usage_01437.pdb # 6: usage_01438.pdb # 7: usage_01589.pdb # 8: usage_01688.pdb # 9: usage_01839.pdb # 10: usage_01840.pdb # 11: usage_01841.pdb # 12: usage_01842.pdb # # Length: 64 # Identity: 2/ 64 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 64 ( 17.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 64 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01433.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01434.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01435.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01436.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01437.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01438.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01589.pdb 1 -QVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKV------HHVSRIAPYDLVRVGD- 52 usage_01688.pdb 1 -YWE--IF-TPE----NAF------TPDDKEQLSE--AITSIYVDYVNLPRF-YVVVLFK 43 usage_01839.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01840.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01841.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 usage_01842.pdb 1 PFINIKLV-PEN----GGP------TNEQKQQLIE--GVSDLMVKVLNKNKA-SIVVIID 46 v t k qL e v v n vV usage_01433.pdb 47 E--- 47 usage_01434.pdb 47 E--- 47 usage_01435.pdb 47 E--- 47 usage_01436.pdb 47 E--- 47 usage_01437.pdb 47 E--- 47 usage_01438.pdb 47 E--- 47 usage_01589.pdb ---- usage_01688.pdb 44 DMPK 47 usage_01839.pdb 47 EVD- 49 usage_01840.pdb 47 E--- 47 usage_01841.pdb 47 E--- 47 usage_01842.pdb 47 E--- 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################