################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:41 2021 # Report_file: c_1105_39.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00276.pdb # 2: usage_00283.pdb # 3: usage_00285.pdb # 4: usage_00295.pdb # 5: usage_00298.pdb # 6: usage_00299.pdb # 7: usage_00343.pdb # 8: usage_00357.pdb # 9: usage_00600.pdb # 10: usage_00601.pdb # 11: usage_00603.pdb # 12: usage_00608.pdb # 13: usage_00712.pdb # 14: usage_00714.pdb # 15: usage_00771.pdb # 16: usage_00787.pdb # 17: usage_00912.pdb # 18: usage_00918.pdb # 19: usage_00922.pdb # 20: usage_00986.pdb # 21: usage_00987.pdb # # Length: 136 # Identity: 93/136 ( 68.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/136 ( 69.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/136 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00276.pdb 1 ------------------SLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 42 usage_00283.pdb 1 -----------------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 43 usage_00285.pdb 1 ----GMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00295.pdb 1 GMSYQERLSGN----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00298.pdb 1 -----MSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 55 usage_00299.pdb 1 ---------------QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 45 usage_00343.pdb 1 -----MSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 55 usage_00357.pdb 1 ----GMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00600.pdb 1 ---------------QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 45 usage_00601.pdb 1 -----MSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 55 usage_00603.pdb 1 ---------------QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 45 usage_00608.pdb 1 ---------------QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 45 usage_00712.pdb 1 ------------------SLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 42 usage_00714.pdb 1 -------------------LYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 41 usage_00771.pdb 1 -----------------PSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 43 usage_00787.pdb 1 -MSYQERLSGN----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 55 usage_00912.pdb 1 ----GMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00918.pdb 1 ----GMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00922.pdb 1 GMSYQERLSGN----QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 usage_00986.pdb 1 ---------------QAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 45 usage_00987.pdb 1 ----GMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA 56 LYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAA usage_00276.pdb 43 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 102 usage_00283.pdb 44 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 103 usage_00285.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR----- 111 usage_00295.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR----- 111 usage_00298.pdb 56 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 115 usage_00299.pdb 46 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 105 usage_00343.pdb 56 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVR------- 108 usage_00357.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR----- 111 usage_00600.pdb 46 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 105 usage_00601.pdb 56 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 115 usage_00603.pdb 46 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 105 usage_00608.pdb 46 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 105 usage_00712.pdb 43 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 102 usage_00714.pdb 42 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 101 usage_00771.pdb 44 TFRGLTNDVYFQVGLLTTIGLSAANAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 103 usage_00787.pdb 56 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR----- 110 usage_00912.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL---- 112 usage_00918.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR----- 111 usage_00922.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL---- 112 usage_00986.pdb 46 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPIL 105 usage_00987.pdb 57 TFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL---- 112 TFRGLTNDVYFQVGLLTTIGLSAkNAILIVEFAKDLMDKEGKGLIEATLDAVR usage_00276.pdb 103 MTSLAFILG------- 111 usage_00283.pdb 104 MTSLAFILGVMPLVIS 119 usage_00285.pdb ---------------- usage_00295.pdb ---------------- usage_00298.pdb 116 MTSLAFILGVMPLVI- 130 usage_00299.pdb 106 MTSLAFILGVMPLVI- 120 usage_00343.pdb ---------------- usage_00357.pdb ---------------- usage_00600.pdb 106 MTSLAFILGVM----- 116 usage_00601.pdb 116 MTSLAFILGVMPLVIS 131 usage_00603.pdb 106 MTSLAFILGVMPLVIS 121 usage_00608.pdb 106 MTSLAFILGVMP---- 117 usage_00712.pdb 103 MTSLAFILGVMPLVIS 118 usage_00714.pdb 102 MTSLAFILGVMPLVI- 116 usage_00771.pdb 104 MTSLAFILGVMPLVI- 118 usage_00787.pdb ---------------- usage_00912.pdb ---------------- usage_00918.pdb ---------------- usage_00922.pdb ---------------- usage_00986.pdb 106 MTSLAFILGVMP---- 117 usage_00987.pdb ---------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################