################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:00 2021 # Report_file: c_1316_31.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00053.pdb # 2: usage_00627.pdb # 3: usage_00654.pdb # 4: usage_00994.pdb # 5: usage_01135.pdb # 6: usage_01331.pdb # 7: usage_01332.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 58 ( 31.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 58 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 SLAIEAVKDFLVKLQDDICEALEA-EDG---Q-ATFMEDKWTREGGGG-GRTRVMVN- 51 usage_00627.pdb 1 SLAVEAVKDFLLKLQDDICEALEA-EDG---Q-ATFVEDKWTREGGGG-GRTRVVD-- 50 usage_00654.pdb 1 IPEIRKFYKPRRDAMLEALEEFMPE---------GVKWTKPEG----GMFIWVTLP-D 44 usage_00994.pdb 1 STDIQRVREFLLDLQARICAGLEQ-QEKAGGGTAEFIIDDWERPEGGG-GRSRVLQN- 55 usage_01135.pdb 1 SLAVEAVKDFLLKLQDDICEALEA-EDG---Q-ATFVEDKWTREGGGG-GRTRVVD-- 50 usage_01331.pdb 1 ---VEAVKEFLLKLQDDICHAIEA-EDE---Q-ATFMEDKWTREGGGG-GRTRVIA-- 47 usage_01332.pdb 1 ---VEAVKEFLLKLQDDICHAIEA-EDE---Q-ATFMEDKWTREGGGG-GRTRVI--- 46 v fl lq ic e f dkw r G gr rv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################