################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:02:33 2021 # Report_file: c_0632_6.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00011.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00017.pdb # 5: usage_00044.pdb # 6: usage_00045.pdb # 7: usage_00058.pdb # 8: usage_00066.pdb # 9: usage_00068.pdb # 10: usage_00082.pdb # 11: usage_00084.pdb # 12: usage_00108.pdb # 13: usage_00110.pdb # 14: usage_00112.pdb # 15: usage_00152.pdb # 16: usage_00166.pdb # 17: usage_00167.pdb # 18: usage_00168.pdb # 19: usage_00169.pdb # 20: usage_00173.pdb # 21: usage_00177.pdb # 22: usage_00178.pdb # 23: usage_00179.pdb # 24: usage_00180.pdb # 25: usage_00181.pdb # 26: usage_00182.pdb # 27: usage_00183.pdb # 28: usage_00184.pdb # 29: usage_00185.pdb # 30: usage_00187.pdb # 31: usage_00195.pdb # 32: usage_00206.pdb # 33: usage_00207.pdb # 34: usage_00208.pdb # 35: usage_00222.pdb # 36: usage_00224.pdb # 37: usage_00244.pdb # 38: usage_00250.pdb # 39: usage_00252.pdb # 40: usage_00256.pdb # 41: usage_00257.pdb # 42: usage_00259.pdb # 43: usage_00260.pdb # # Length: 136 # Identity: 0/136 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/136 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/136 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ------TPLHLAAKT--G-HLEIVEVLLK-YG-ADVNAWDN--------------YGA-T 34 usage_00014.pdb 1 ------TPLHLAAKT--G-HLEIVEVLLK-YG-ADVNAWDN--------------YGA-T 34 usage_00015.pdb 1 ------TPLHLAAKT--G-HLEIVEVLLK-YG-ADVNAWDN--------------YGA-T 34 usage_00017.pdb 1 -------PLHYAAEN--G-HKEIVKLLLS-KG-ADPNAKDS--------------DGR-T 33 usage_00044.pdb 1 ------TPLMWSIIF--G-YSEMSYFLLE-HG-ANVNDRNL--------------EGE-T 34 usage_00045.pdb 1 -------PLMVACML--G-MENAIDKLVE-NF-DKLEDKDI--------------EGS-T 33 usage_00058.pdb 1 ------TPLHLAADM--G-HLEIVEVLLK-TG-ADVNAAATGHYFQPYFSHSVSYFGE-T 48 usage_00066.pdb 1 ----PLVLLLDAALT--G-ELEVVQQAVK-EM-NDPSQPNE--------------EGI-T 36 usage_00068.pdb 1 -------ALHCAVASLHPKRKQVAELLLR-KG-ANVNEKNK--------------DFM-T 36 usage_00082.pdb 1 ------TCLHLASIH--G-YLGIVELLVS-LG-ADVNAQEPC-------------NGR-T 35 usage_00084.pdb 1 --------LHQACME--N-EFFKVQELLH-SKPSLLLQKDQ--------------DGR-I 33 usage_00108.pdb 1 -------ALHVAVNT--E-CQETVQLLLE-RG-ADIDAVDIK-------------SGR-S 34 usage_00110.pdb 1 -------ALHVAVNT--E-CQETVQLLLE-RG-ADIDAVDIK-------------SGR-S 34 usage_00112.pdb 1 -------PLHVAVIH--K-DAEMVRLLRD-AG-ADLNKPEPT-------------CGR-T 34 usage_00152.pdb 1 ------YPVHLAVRA--R-SPECLDLLVD-SG-AEVEATERQ-------------GGR-T 35 usage_00166.pdb 1 ------TPLHLAARN--G-HLEVVKLLLE-AG-ADVNAKDK--------------NGR-T 34 usage_00167.pdb 1 ----CDKEFMWALKN--G-DLDEVKDYVA-KG-EDVNRTLE--------------GGR-K 36 usage_00168.pdb 1 --------LHVASFM--G-HLPIVKNLLQ-RG-ASPNVS-NV----K---------VE-T 32 usage_00169.pdb 1 ------TPLHVASHY--G-NIKLVKFLLQ-HQ-ADVNAKTK--------------LGY-S 34 usage_00173.pdb 1 -SDDENEKIHVAARK--G-QTDEVRRLIE-TG-VSPTIQNR--------------FGC-T 39 usage_00177.pdb 1 -----GKKLLEAARA--G-HDDSVEVLLK-KG-ADINAKDN--------------SGR-T 35 usage_00178.pdb 1 ------TPLHVAALN--G-HLELVKLLLE-KG-ADINARDM--------------FGL-T 34 usage_00179.pdb 1 ----IGKKLLEAARA--G-HDDSVEVLLK-KG-ADINAKDN--------------SGR-T 36 usage_00180.pdb 1 -------PLHYAAEN--G-HKEIVKLLLS-KG-ADPNAKDS--------------DGR-T 33 usage_00181.pdb 1 -------PLHYAAEN--G-HKEIVKLLLS-KG-ADPNAKDS--------------DGR-T 33 usage_00182.pdb 1 ------SPLHAAAEA--G-HVDICHMLVQ-AG-ANIDTCSE--------------DQR-T 34 usage_00183.pdb 1 ------TPMIWATEY--K-HVDLVKLLLS-KG-SDINIRDN--------------EEN-I 34 usage_00184.pdb 1 -------PLHAAAEA--G-HVDICHMLVQ-AG-ANIDTCSE--------------DQR-T 33 usage_00185.pdb 1 ------TPMIWATEY--K-HVDLVKLLLS-KG-SDINIRDN--------------EEN-I 34 usage_00187.pdb 1 ------SALSLASTG--G-YTDIVGLLLE-RD-VDINIYDW--------------NGG-T 34 usage_00195.pdb 1 ------TPLYLACQE--G-HLEVTKYLVQECS-ADPHLRAQ--------------DGM-T 35 usage_00206.pdb 1 --------LHVAAHC--G-HYRVTKLLLD-KR-ANPNARAL--------------NGF-T 32 usage_00207.pdb 1 --------ALHAARA--G-QVEVVRCLLR-NG-ALVDARAR--------------EEQ-T 32 usage_00208.pdb 1 -------PLHIAAHY--G-NVNVATLLLN-RG-AAVDFTAR--------------NGI-T 33 usage_00222.pdb 1 ------TLLHRACIE--G-QLRRVQDLVR-QG-HPLNPRDY--------------CGW-T 34 usage_00224.pdb 1 ------TALMDAAEK--G-HVEVLKILLDEMG-ADVNACDN--------------MGR-N 35 usage_00244.pdb 1 ------VPLWEAMVE--G-HEKVVKVLLE-HG-STIDAGDV-----------------GH 32 usage_00250.pdb 1 ------TPLMAACYL--G-QVENVKWLIE-HG-ANIDQQQSH-------------SGH-C 35 usage_00252.pdb 1 -------PLHLACQQ--G-HFQVVKCLLD-SN-AKPNKKDL--------------SGN-T 33 usage_00256.pdb 1 -------PLHLACQK--G-YQSVTLLLLH-YK-ASAEVQDN--------------NGN-T 33 usage_00257.pdb 1 -------PLHLACQK--G-YQSVTLLLLH-YK-ASAEVQDN--------------NGN-T 33 usage_00259.pdb 1 -----GKRLIEAAEN--G-NKDRVKDLLE-NG-ADVNASDS--------------DGK-T 35 usage_00260.pdb 1 E---LGKRLIEAAEN--G-NKDRVKDLLE-NG-ADVNASDS--------------DGK-T 37 a usage_00011.pdb 35 PLHLAADNG--------HLEIVEVLL-KH---G--AD-VNAKD---YEGFTPLHLAAYDG 76 usage_00014.pdb 35 PLHLAADNG--------HLEIVEVLL-KH---G--AD-VNAKD---YEGFTPLHLAAYDG 76 usage_00015.pdb 35 PLHLAADNG--------HLEIVEVLL-KH---G--AD-VNAKD---YEGFTPLHLAAYDG 76 usage_00017.pdb 34 PLHYAAENG--------HKEIVKLLL-SK---G--AD-PNTSD---SDGRTPLDLAREHG 75 usage_00044.pdb 35 PLIVASKYG--------RSEIVKKLL-EL---G--AD-ISARD---LTGLTAEASARIFG 76 usage_00045.pdb 34 ALIWAVKNN--------RLGIAEKLL-SK---G--SN-VNTKD---FSGKTPLMWSIIFG 75 usage_00058.pdb 49 PLHLAAEMG--------HLEIVEVLL-KA---G--AD-VNAFA---DLGHTPLHLAAQWG 90 usage_00066.pdb 37 ALHNAICGA--------NYSIVDFLI-TA---G--AN-VNSPD---SHGWTPLHCAASCN 78 usage_00068.pdb 37 PLHVAAERA--------HNDVMEVLH-KH---G--AK-MNALD---SLGQTALHRAALAG 78 usage_00082.pdb 36 ALHLAVDLQ--------NPDLVSLLL-KC---G--AD-VNRVT---YQGYSPYQLTWGRP 77 usage_00084.pdb 34 PLHWSVSFQ--------AHEITSFLL-SK---MENVNLDDYPD---DSGWTPFHIACSVG 78 usage_00108.pdb 35 PLIHAVENN--------SLSMVQLLL-QH---G--AN-VNAQM---YSGSSALHSASGRG 76 usage_00110.pdb 35 PLIHAVENN--------SLSMVQLLL-QH---G--AN-VNAQM---YSGSSALHSASGRG 76 usage_00112.pdb 35 PLHLAVEAQ--------AASVLELLL-KA---G--AD-PTARM---YGGRTPLGSALLRP 76 usage_00152.pdb 36 ALHLATEME--------ELGLVTHLVTKL---R--AN-VNART---FAGNTPLHLAAGLG 78 usage_00166.pdb 35 PLHLAARNG--------HLEVVKLLL-EA---G--AD-VNAKD---KNGRTPLHLAARNG 76 usage_00167.pdb 37 PLHYAADCG--------QLEILEFLL-LK---G--AD-INAPD---KHHITPLLSAVYEG 78 usage_00168.pdb 33 PLHMAARAG--------HTEVAKYLL-QN---K--AK-VNAKA---KDDQTPLHCAARIG 74 usage_00169.pdb 35 PLHQAAQQG--------HTDIVTLLL-KN---G--AS-PNEVS---SDGTTPLAIAKRLG 76 usage_00173.pdb 40 ALHLACKFG--------CVDTAKYLA-SV---G--EV-H-SL----WHGQKPIHLAV-AN 78 usage_00177.pdb 36 PLHVAALNG--------HLELVKLLL-EK---G--AD-INARD---MFGLTPLHTAASNG 77 usage_00178.pdb 35 PLHTAASNG--------HLELVKLLL-EK---G--AD-INARD---EDGSTPLHLAASNG 76 usage_00179.pdb 37 PLHVAALNG--------HLELVKLLL-EK---G--AD-INARD---MFGLTPLHTAASNG 78 usage_00180.pdb 34 PLHYAAENG--------HKEIVKLLL-SK---G--AD-PNTSD---SDGRTPLDLAREHG 75 usage_00181.pdb 34 PLHYAAENG--------HKEIVKLLL-SK---G--AD-PNTSD---SDGRTPLDLAREHG 75 usage_00182.pdb 35 PLMEAAENN--------HLEAVKYLI-KA---G--AL-VDPKD---AEGSTCLHLAAKKG 76 usage_00183.pdb 35 CLHWAAFSG--------CVDIAEILL-AA---K--CD-LHAVN---IHGDSPLHIAAREN 76 usage_00184.pdb 34 PLMEAAENN--------HLEAVKYLI-KA---G--AL-VDPKD---AEGSTCLHLAAKKG 75 usage_00185.pdb 35 CLHWAAFSG--------CVDIAEILL-AA---K--CD-LHAVN---IHGDSPLHIAAREN 76 usage_00187.pdb 35 PLLYAVRGN--------HVKCVEALL-AR---G--AD-LTTEA---DSGYTPMDLAVALG 76 usage_00195.pdb 36 PLHAAAQMG--------HNPVLVWLVSFA---D--VS-FSEQD---HDGATAMHFAASRG 78 usage_00206.pdb 33 PLHIACKKN--------RIKV-ELLV-KY---G--AS-IQAIT---ESGLTPIHVAAF-G 72 usage_00207.pdb 33 PLHIASRLG--------KTEIVQLLL-QH------AH-PDAAT---TNGYTPLHISAREG 73 usage_00208.pdb 34 PLHVASKRG--------NTNMVKLLL-DR---G--GQ-IDAKT---RDGLTPLHCAARSG 75 usage_00222.pdb 35 PLHEACNYG--------HLEIVRFLL-DH---G--AA-VDDPGGQGCEGITPLHDALNCG 79 usage_00224.pdb 36 ALIHALLSS---D-DSDVEAITHLLL-DH---G--AD-VNVRG---ERGKTPLILAVEKK 81 usage_00244.pdb 33 FACTAAEQG--------NLKLLKEIV-LH---G--GD-VTRPR---ATGTSALHTAVCEE 74 usage_00250.pdb 36 PLSLTLKGYSLAKDTQKYIDIIQLLI-KN---Q--VN-LLVHD---RSDKTFLHNAALVL 85 usage_00252.pdb 34 PLIYACSGG--------HHELVALLL-QH---G--AS-INASN---NKGNTALHEAVIEK 75 usage_00256.pdb 34 PLHLACTYG--------HEDCVKALV-YYDVES--CR-LDIGN---EKGDTPLHIAARWG 78 usage_00257.pdb 34 PLHLACTYG--------HEDCVKALV-YYDVES--CR-LDIGN---EKGDTPLHIAARWG 78 usage_00259.pdb 36 PLHLAAENG--------HKEVVKLLL-SQ---G--AD-PNAKD---SDGKTPLHLAAENG 77 usage_00260.pdb 38 PLHLAAENG--------HKEVVKLLL-SQ---G--AD-PNAKD---SDGKTPLHLAAENG 79 l l usage_00011.pdb 77 HLEIVEVLLKYG---- 88 usage_00014.pdb 77 HLEIVEVLLK------ 86 usage_00015.pdb 77 HLEIVEVLLK------ 86 usage_00017.pdb 76 NEEIVKLLE------- 84 usage_00044.pdb 77 RQEVIKIFTEVR---- 88 usage_00045.pdb 76 YSEMSYFLLEHG---- 87 usage_00058.pdb 91 HLEIVEVLLKHG---- 102 usage_00066.pdb 79 DTVICMALVQHG---- 90 usage_00068.pdb 79 HLQTCRLLLSYG---- 90 usage_00082.pdb 78 STRIQQQLGQL----- 88 usage_00084.pdb 79 NLEVVKSLY------- 87 usage_00108.pdb 77 LLPLVRTLVRSG---- 88 usage_00110.pdb 77 LLPLVRTLVRSG---- 88 usage_00112.pdb 77 NPILARLLRAH----- 87 usage_00152.pdb 79 YPTLTRLLLKA----- 89 usage_00166.pdb 77 HLEVVKLLLEAG---- 88 usage_00167.pdb 79 HVSCVKLLLSKG---- 90 usage_00168.pdb 75 HTNMVKLLLENN---- 86 usage_00169.pdb 77 YISVTDVLKVVT---- 88 usage_00173.pdb 79 KTDLVVALVEGAKERG 94 usage_00177.pdb 78 HLELVKLLLEKG---- 89 usage_00178.pdb 77 HLELVKLLLEKG---- 88 usage_00179.pdb 79 HLELVKLLLEKG---- 90 usage_00180.pdb 76 NEEIVKLLE------- 84 usage_00181.pdb 76 NEEIVKLL-------- 83 usage_00182.pdb 77 HYEVVQYLL------- 85 usage_00183.pdb 77 RYDCVVLFLSRD---- 88 usage_00184.pdb 76 HYEVVQYLL------- 84 usage_00185.pdb 77 RYDCVVLFLSRD---- 88 usage_00187.pdb 77 YRKVQQVIENHILKL- 91 usage_00195.pdb 79 HTKVLSWLLLHG---- 90 usage_00206.pdb 73 HLNIVLLLLQNG---- 84 usage_00207.pdb 74 QVDVASVLLEA----- 84 usage_00208.pdb 76 HDQVVELLKVVT---- 87 usage_00222.pdb 80 HFEVAELLLER----- 90 usage_00224.pdb 82 HLGLVQRLLE------ 91 usage_00244.pdb 75 NIEMVKYLLEQG---- 86 usage_00250.pdb 86 NNLDFQSVVKFLI-G- 99 usage_00252.pdb 76 HVFVVELLLLHG---- 87 usage_00256.pdb 79 YQGVIETLLQNG---- 90 usage_00257.pdb 79 YQGVIETLLQNG---- 90 usage_00259.pdb 78 HKEVVKLLLSQG---- 89 usage_00260.pdb 80 HKEVVKLLLSQG---- 91 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################