################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:32 2021 # Report_file: c_1448_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00119.pdb # 2: usage_00405.pdb # 3: usage_00502.pdb # 4: usage_00606.pdb # 5: usage_00613.pdb # 6: usage_01135.pdb # 7: usage_01214.pdb # 8: usage_01610.pdb # # Length: 31 # Identity: 0/ 31 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 31 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 31 ( 64.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 --SVFLFPP--KPKDTLM------ISRTPEV 21 usage_00405.pdb 1 --SVFLFPP--KPKDTLM------ISRTPEV 21 usage_00502.pdb 1 --DGFDFGDDPSDKFFTS------HN----- 18 usage_00606.pdb 1 --SVFLFPP--KPKDTLM------ISRTPEV 21 usage_00613.pdb 1 --SVFLFPP--KPKDTLM------ISRTPEV 21 usage_01135.pdb 1 GPSVFLFPP--KPKDTLE------ASRTPEV 23 usage_01214.pdb 1 --SVFLFPP--KPKDTLM------ISRTPEV 21 usage_01610.pdb 1 ---FGKCGP--PPP----IDNGDITSFPLSV 22 f f p pk s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################