################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:52 2021 # Report_file: c_1434_93.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00548.pdb # 2: usage_00549.pdb # 3: usage_00550.pdb # 4: usage_00899.pdb # 5: usage_00900.pdb # 6: usage_00901.pdb # 7: usage_00927.pdb # 8: usage_00928.pdb # 9: usage_00929.pdb # 10: usage_00930.pdb # # Length: 91 # Identity: 62/ 91 ( 68.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 91 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 91 ( 9.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00548.pdb 1 DYVGISFWLAAAIMLASTVFFFVERSDVPVKWKTSLTVAGLVTGVAFWHYLYMRGVWIYA 60 usage_00549.pdb 1 --VGISFWLAAAIMLASTVFFFVERSDVPVKWKTSLTVAGLVTGVAFWHYLYMRGVWIYA 58 usage_00550.pdb 1 DYVGISFWLAAAIMLASTVFFFVERSDVPVKWKTSLTVAGLVTGVAFWHYLYMRGVWIYA 60 usage_00899.pdb 1 DTVGVSFWLVTAG-LAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLY-RGVWIDT 58 usage_00900.pdb 1 DTVGVSFWLVTAG-LAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLY-RGVWIDT 58 usage_00901.pdb 1 -TVGVSFWLVTAG-LAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLY-RGVWIDT 57 usage_00927.pdb 1 -TVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDT 59 usage_00928.pdb 1 -TVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDT 59 usage_00929.pdb 1 -TVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDT 59 usage_00930.pdb 1 DTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDT 60 VG SFWL A LA TVFFFVER V KWKTSLTV GL TG AFWHYLY RGVWI usage_00548.pdb 61 GETPTVFRYIDWLITVPLQIIEFYLIIA--- 88 usage_00549.pdb 59 GETPTVFRYIDWLITVPLQIIEFYLI----- 84 usage_00550.pdb 61 GETPTVFRYIDWLITVPLQIIEFYLII---- 87 usage_00899.pdb 59 GDTPTVFRYINWLLTVPLQVVEFYLILAAC- 88 usage_00900.pdb 59 GDTPTVFRYINWLLTVPLQVVEFYLILAAC- 88 usage_00901.pdb 58 GDTPTVFRYINWLLTVPLQVVEFYLILA--- 85 usage_00927.pdb 60 GDTPTVFRYINWLLTVPLLVVEFYLI----- 85 usage_00928.pdb 60 GDTPTVFRYINWLLTVPLLVVEFYLILAACT 90 usage_00929.pdb 60 GDTPTVFRYINWLLTVPLLVVEFYLILAACT 90 usage_00930.pdb 61 GDTPTVFRYINWLLTVPLLVVEFYLILAAC- 90 G TPTVFRYI WL TVPL EFYLI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################