################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:34 2021 # Report_file: c_0244_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00054.pdb # # Length: 130 # Identity: 94/130 ( 72.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/130 ( 72.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/130 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 YPIAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAK 60 usage_00017.pdb 1 YPIAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAK 60 usage_00018.pdb 1 YPIAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAK 60 usage_00019.pdb 1 ---AILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAK 57 usage_00052.pdb 1 HPVGIVANNGVLFSESALKGAHFIELCDKRKIPLLFLQNIAGFMVGRDYEAGGIAKHGAK 60 usage_00053.pdb 1 HPVGIVANNGVLFSESALKGAHFIELCDKRKIPLLFLQNIAGFMVGRDYEAGGIAKHGAK 60 usage_00054.pdb 1 HPVGIVANNGVLFSESALKGAHFIELCDKRKIPLLFLQNIAGFMVGRDYEAGGIAKHGAK 60 I ANNG LF E A KGAHFIEL R IPLLFLQNI GFMVG YEAGGIAKHGAK usage_00016.pdb 61 LVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQ 120 usage_00017.pdb 61 LVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQ 120 usage_00018.pdb 61 LVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQ 120 usage_00019.pdb 58 LVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQ 117 usage_00052.pdb 61 MVTAVACARVPKLTVVIGGSYGAGNYSMCGRAYSPRFLWMWPNARISVMGGEQAASVLAT 120 usage_00053.pdb 61 MVTAVACARVPKLTVVIGGSYGAGNYSMCGRAYSPRFLWMWPNARISVMGGEQAASVL-- 118 usage_00054.pdb 61 MVTAVACARVPKLTVVIGGSYGAGNYSMCGRAYSPRFLWMWPNARISVMGGEQAASVLAT 120 VTAVACARVPK TV IGGS GAGNY MCGRAY PRFLWMWPNARI VMGGEQAA VL usage_00016.pdb 121 VKREQAERAG 130 usage_00017.pdb 121 VKREQAERAG 130 usage_00018.pdb 121 VKREQAERAG 130 usage_00019.pdb 118 VKREQAERAG 127 usage_00052.pdb 121 VRGEQLSAAG 130 usage_00053.pdb ---------- usage_00054.pdb 121 VRGEQLSAAG 130 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################