################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:43 2021 # Report_file: c_0680_16.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00048.pdb # 2: usage_00222.pdb # 3: usage_00251.pdb # 4: usage_00271.pdb # 5: usage_00285.pdb # 6: usage_00286.pdb # 7: usage_00672.pdb # 8: usage_00785.pdb # 9: usage_00905.pdb # 10: usage_00933.pdb # 11: usage_01259.pdb # # Length: 66 # Identity: 45/ 66 ( 68.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 66 ( 68.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 66 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 -SYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 59 usage_00222.pdb 1 --YICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 58 usage_00251.pdb 1 ----------------ETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 44 usage_00271.pdb 1 ----------------ETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 44 usage_00285.pdb 1 QSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 60 usage_00286.pdb 1 ----------------ETHKDDQLICVNENGGCEQYCSDHT--KRSCRCHEGYSLLADGV 42 usage_00672.pdb 1 QSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 60 usage_00785.pdb 1 --YICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 58 usage_00905.pdb 1 QSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 60 usage_00933.pdb 1 QSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 60 usage_01259.pdb 1 QSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDH---KRSCRCHEGYSLLADGV 57 ETHKDDQLICVNENGGCEQYCSDH KRSCRCHEGYSLLADGV usage_00048.pdb 60 SCTP-- 63 usage_00222.pdb 59 SCTP-- 62 usage_00251.pdb 45 SCTP-- 48 usage_00271.pdb 45 SCTP-- 48 usage_00285.pdb 61 SCTPTV 66 usage_00286.pdb 43 SCTP-- 46 usage_00672.pdb 61 SCTP-- 64 usage_00785.pdb 59 SCTP-- 62 usage_00905.pdb 61 SCTPTV 66 usage_00933.pdb 61 SCTP-- 64 usage_01259.pdb 58 SCTP-- 61 SCTP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################