################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:30 2021 # Report_file: c_0395_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00150.pdb # 2: usage_00153.pdb # 3: usage_00330.pdb # 4: usage_00331.pdb # 5: usage_00332.pdb # 6: usage_00335.pdb # 7: usage_00336.pdb # 8: usage_00337.pdb # 9: usage_00338.pdb # # Length: 85 # Identity: 4/ 85 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 85 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 85 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00150.pdb 1 ----EVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQY-NPEDPQSLI----TNDVT-- 49 usage_00153.pdb 1 ----HIYEDK-EQQLWIATD-GSINRYDYATRQFIHYNI-VDN-TGTYN----TNWTY-- 46 usage_00330.pdb 1 ----SLAMDS-QNRLWIGTF-NDLNIYHEGTDSFASYSS-NPVENGSLS----QRSVR-- 47 usage_00331.pdb 1 ----SLAMDS-QNRLWIGTF-NDLNIYHEGTDSFASYSS-NPVENGSLS----QRSVR-- 47 usage_00332.pdb 1 ---YAILPDG-EGNLWLGTL-SALVRFNPEQRSFTTIEKEKD---GTPVVQI-----T-- 45 usage_00335.pdb 1 NYIRSLAMDS-QNRLWIGTF-NDLNIYHEGTDSFASYSS-NPVENGSLS----QRSVR-- 51 usage_00336.pdb 1 ----GILEDS-FGRLWLSTN-RGISCFNPETEKFRNFTE-SD----GL----QSNQFNTA 45 usage_00337.pdb 1 -YIRSLAMDS-QNRLWIGTF-NDLNIYHEGTDSFASYSS-NPVENGSLS----QRSVR-- 50 usage_00338.pdb 1 ----SIDQDK-RGNMWFATY-DGVNKYDG--YAFTVYQH-NEDDPNSIA----NDISR-- 45 D W T F usage_00150.pdb 50 HITSSVQAGKGLWVCTYYRGIEYLD 74 usage_00153.pdb 47 YIFEDTA--GQLWISTCLGGIFVVD 69 usage_00330.pdb 48 SIFMDSQ--GGMWLGTYFGGLNYYH 70 usage_00331.pdb 48 SIFMDSQ--GGMWLGTYFGGLNYYH 70 usage_00332.pdb 46 TLFRDSH--KRLWIGGEEGLSVFK- 67 usage_00335.pdb 52 SIFMDSQ--GGMWLGTYFGGLNYYH 74 usage_00336.pdb 46 SYCRTSV--GQMYFGGINGITTFR- 67 usage_00337.pdb 51 SIFMDSQ--GGMWLGTYFGGLNYYH 73 usage_00338.pdb 46 IVKTDSQ--GRVWIGTRDGLSRY-- 66 w g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################