################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:33 2021 # Report_file: c_0087_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00057.pdb # 3: usage_00083.pdb # 4: usage_00108.pdb # 5: usage_00109.pdb # 6: usage_00110.pdb # 7: usage_00111.pdb # # Length: 113 # Identity: 35/113 ( 31.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/113 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/113 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 NFMLNQPHSVSESPGKTVTISCTRSSGNID-SNYVQWYQQRPGSAPITVIYEDNQRPSGV 59 usage_00057.pdb 1 QTVVTQEPSLSVSPGGTVTLTCGLSSGSVTASNYPGWFQQTPGQAPRALIYSTNDRHSGV 60 usage_00083.pdb 1 NFMLTQSHSVSESPGKTVTISCTRSSGSIA-SNYVQWYQQRPGSSPTTVIYEDNQRPSGV 59 usage_00108.pdb 1 -AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGV 59 usage_00109.pdb 1 -FVLTQPNSVSTNLGSTVKLSCKRSTGNIG-SNYVNWYQQHEGRSPTTMIYRDDKRPDGV 58 usage_00110.pdb 1 -FVLTQPNSVSTNLGSTVKLSCKRSTGNIG-SNYVNWYQQHEGRSPTTMIYRDDKRPDGV 58 usage_00111.pdb 1 -FVLTQPNSVSTNLGSTVKLSCKRSTGNIG-SNYVNWYQQHEGRSPTTMIYRDDKRPDGV 58 tQ s s G TV C S G SNY W Qq g p Iy R GV usage_00013.pdb 60 PDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDARNVVFGGGT-RLTVLG 111 usage_00057.pdb 61 PSRFSGSIS-G-NKAALTITGAQPEDEADYYCALDIGDITEFGGGT-HLTV-- 108 usage_00083.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVFGGGTKLTV-- 110 usage_00108.pdb 60 PARFSGSLI-G-DKAALTITGAQTEDEAIYFCALWSNNKLVFGGGT-KLTVL- 108 usage_00109.pdb 59 PDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGG-T-KLTVLG 109 usage_00110.pdb 59 PDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGG-T-KLTVLG 109 usage_00111.pdb 59 PDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGG-T-KLTVLG 109 P RFsGSi n A LTI tEDEAdY C gG t LTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################