################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:13 2021 # Report_file: c_1488_142.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02083.pdb # 2: usage_05324.pdb # 3: usage_05325.pdb # 4: usage_05326.pdb # 5: usage_05327.pdb # 6: usage_05328.pdb # 7: usage_05939.pdb # 8: usage_08408.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 33 ( 6.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 33 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02083.pdb 1 GCS-KTHLPG-------FVEQAEALKAKG---- 21 usage_05324.pdb 1 ---VAPLRDQ-------LPRVIEQELMMHEKT- 22 usage_05325.pdb 1 ---VAPLRDQ-------LPRVIEQELMMH---- 19 usage_05326.pdb 1 ---VAPLRDQ-------LPRVIEQELMMHEKT- 22 usage_05327.pdb 1 ---VAPLRDQ-------LPRVIEQELMMAEKT- 22 usage_05328.pdb 1 ---VAPLRDQ-------LPRVIEQELMMAEKT- 22 usage_05939.pdb 1 ----------DIQMPVMDGLEAVSEIRNYERT- 22 usage_08408.pdb 1 ---VAPLRDQ-------LPRVIEQELMMHEATF 23 e e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################