################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:28 2021 # Report_file: c_0668_7.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00021.pdb # 2: usage_00197.pdb # 3: usage_00314.pdb # 4: usage_00365.pdb # 5: usage_00435.pdb # 6: usage_00453.pdb # # Length: 75 # Identity: 5/ 75 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 75 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 75 ( 48.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -RISITRDTS-----------K--NQFFLQLNSVTTEDTATYYCARYYYGYWYF------ 40 usage_00197.pdb 1 --VYYCARRLA--LV-RMWMD-YWGQGTL--VTVSSAST-KGPSVFPLAP----SS---- 43 usage_00314.pdb 1 --VYYCARDPGLWD-YYYGMD-VWGQGTL--VTVSSAST-KGPSVFPLAP----SSKSTS 49 usage_00365.pdb 1 A-VYYCARKDP---S--DAFP-YWGQGTL--VTVSSAST-KGPSVFPLAP---------- 40 usage_00435.pdb 1 A-VYYCARYDG--I-YGEL-D-FWGQGTL--VTVSSAST-KGPSVFPLAP---G------ 42 usage_00453.pdb 1 --MYYCVIRG------------QWGQGTL--VTVSSAST-KGPSVFPLAP----S----- 34 yyc gQgtL vtVssasT kgpsvfplap usage_00021.pdb 41 -DVW--GQGTTLTVS 52 usage_00197.pdb 44 -GTAALGCLVK-D-- 54 usage_00314.pdb 50 GGTAALGCLVK-D-- 61 usage_00365.pdb 41 --TAALGCLVK-D-- 50 usage_00435.pdb 43 -GTAALGCLVK-D-- 53 usage_00453.pdb 35 -GTAALGCLVK-D-- 45 ta Gclvk d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################