################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:29 2021 # Report_file: c_0385_40.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00291.pdb # 3: usage_00411.pdb # 4: usage_00422.pdb # 5: usage_00557.pdb # # Length: 77 # Identity: 15/ 77 ( 19.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 77 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 77 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SNKVTEKGKYVELRCDPISG--H-TALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRF 57 usage_00291.pdb 1 RYKVTKRGQDVALRCDPISG--H-VSLYWYRQALGQGPEFLTYFNYEAQQDKSGLPNDRF 57 usage_00411.pdb 1 RHKITKRGQNVTFRCDPISE--H-NRLYWYRQTLGQGPEFLTYFQNEAQLEKSRLLSDRF 57 usage_00422.pdb 1 DSMESTEGETVHLPCSHAT-ISGNEYIYWYRQVPLQGPEYVTHGLQQN-TT-----NSMA 53 usage_00557.pdb 1 RHKITKRGQNVTFRCDPISE--H-NRLYWYRQTLGQGPEFLTYFQNEAQLEKSRLLSDRF 57 k t G V rCdpis h lYWYRQ lgQGPEfltyf drf usage_00001.pdb 58 FAVRP-EGSVSTLKIQR 73 usage_00291.pdb 58 SAERP-EGSISTLTIQR 73 usage_00411.pdb 58 SAERP-KGSFSTLEI-- 71 usage_00422.pdb 54 FLAIASDRKSSTLILPH 70 usage_00557.pdb 58 SAERP-KGSFSTLEIQR 73 a rp gs STL i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################