################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:08 2021 # Report_file: c_1320_62.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00062.pdb # 2: usage_00152.pdb # 3: usage_00153.pdb # 4: usage_00162.pdb # 5: usage_00306.pdb # 6: usage_00314.pdb # 7: usage_00330.pdb # 8: usage_00356.pdb # 9: usage_00373.pdb # 10: usage_00438.pdb # 11: usage_00441.pdb # 12: usage_00482.pdb # 13: usage_00518.pdb # 14: usage_00548.pdb # 15: usage_00549.pdb # 16: usage_00585.pdb # 17: usage_00594.pdb # # Length: 58 # Identity: 2/ 58 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 58 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 58 ( 72.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 ---RPEDTAVYYCN-RGIS--------------------------NPWGQGTQVTVS- 27 usage_00152.pdb 1 ---TAADTALYYCA-RQ--GTG-T-----T-----GVS---EDSFDLWGQGTKVIVS- 37 usage_00153.pdb 1 ---TAADTALYYCA-RQ--GTG-T-----T-----GVS---EDSFDLWGQGTKVIVS- 37 usage_00162.pdb 1 ----AADTAVYYCA-RA--PS--GYP--GV-----SLYQ--YYGLDVWGQGTTVTVS- 39 usage_00306.pdb 1 ---RSEDTAMYYCA-RA--YY--G-----------------YVGLVHWGQGTLVTVS- 32 usage_00314.pdb 1 ---RSDDTAVYYCA-RD--PA--AWPLQ---------QS--LAWFDPWGQGTMVTVS- 38 usage_00330.pdb 1 ----SDDTAVYYCA-RS--GG--------------------PYFFDYWGQGTLVT--- 28 usage_00356.pdb 1 ---RSEDTAMYYCA-RA--YY--G-----------------YVGLVHWGQGTLVTVS- 32 usage_00373.pdb 1 ----TEDTATYYCA-RY--G-------------------------GYWGQGTSVTVS- 25 usage_00438.pdb 1 ----AADTAVYFCA-RR--SNW----------------P--YLPFDPWGQGTLVTVS- 32 usage_00441.pdb 1 ---RSEDTAVYYCA-RV--DDY-------------------YLGYDYWG-QGTQVTV- 31 usage_00482.pdb 1 ---RSEDTAIYYCA-RD--KVDDY-----GDYWFP---T--LWYFDYWGQGTLVTVS- 41 usage_00518.pdb 1 ----AEDTAVYYCA-SR--LG--V------R--------ATTGDLDYWGQGTLVT--- 32 usage_00548.pdb 1 ----SEDTAVYYCA-RG--IS--G--------------S--YGWFDPWGQGTLVTVS- 32 usage_00549.pdb 1 ----SEDTAVYYCA-RG--IS--G--------------S--YGWFDPWGQGTLVTVS- 32 usage_00585.pdb 1 ---QTEDTAMYFCA-RS--QLP--GY---N-------L---RGWFVYWGQGTLVIVS- 36 usage_00594.pdb 1 GSAEAGITGTWSDQL---------------------------------GDTFIVTAGA 25 dTa y c G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################