################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:40 2021 # Report_file: c_0516_17.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00098.pdb # 2: usage_00099.pdb # 3: usage_00100.pdb # 4: usage_00101.pdb # 5: usage_00102.pdb # 6: usage_00103.pdb # 7: usage_00104.pdb # 8: usage_00105.pdb # 9: usage_00129.pdb # 10: usage_00224.pdb # 11: usage_00231.pdb # 12: usage_00232.pdb # 13: usage_00258.pdb # 14: usage_00259.pdb # # Length: 82 # Identity: 19/ 82 ( 23.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 82 ( 30.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 82 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00099.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00100.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00101.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00102.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00103.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00104.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00105.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00129.pdb 1 -------------HVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIE 47 usage_00224.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVEQ 54 usage_00231.pdb 1 -----FAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIE 55 usage_00232.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIE 60 usage_00258.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 usage_00259.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVME 54 H P VL GGGDGG RE Ve d ID V e usage_00098.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00099.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00100.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00101.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00102.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00103.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00104.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00105.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00129.pdb 48 YSKKFLPSIAGKLDDPRVDVQV 69 usage_00224.pdb 55 SKQHFPQISRSLA-DPRATVRV 75 usage_00231.pdb 56 VSKIYFKNISCGYEDKRVNVFI 77 usage_00232.pdb 61 VSKIYFKNISCGYEDKRVNVFI 82 usage_00258.pdb 55 QSKQHFPQISRSLADPRATVRV 76 usage_00259.pdb 55 QSKQHFPQISRSLADPRATVRV 76 sk i D R V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################