################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:54 2021 # Report_file: c_0293_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00067.pdb # 2: usage_00085.pdb # 3: usage_00174.pdb # 4: usage_00186.pdb # 5: usage_00192.pdb # 6: usage_00214.pdb # 7: usage_00427.pdb # # Length: 136 # Identity: 25/136 ( 18.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/136 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/136 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 --KVSLAFHRT--QGLMIMKTVY--KGPNCIE-HNEALLEEAKMMNRLRHSRVVKLLGVI 53 usage_00085.pdb 1 -GEVWMGTWNG--TTRVAIKTLKPG-TM-----SPEAFLQEAQVMKKLRHEKLVQLYAVV 51 usage_00174.pdb 1 FGEVWMGTWNG--TTRVAIKTLKPG-TM-----SPEAFLQEAQVMKKLRHEKLVQLYAVV 52 usage_00186.pdb 1 -GEVWMGTWNG--TTRVAIKTLKPG-TM-----SPEAFLQEAQVMKKLRHEKLVQLYAVV 51 usage_00192.pdb 1 -GEVWMGTWNG--TTRVAIKTLKPM--------SPEAFLQEAQVMKKLRHEKLVQLYAVV 49 usage_00214.pdb 1 ----GRLRVPGQRDVPVAIKALKA-GYT---ERQRRDFLSEASIMGQFDHPNIIRLEGVV 52 usage_00427.pdb 1 -----MGTWNG--TTRVAIKTLKPG-TM-----SPEAFLQEAQVMKKLRHEKLVQLYAVV 47 g vaiKtlk eafL EA M lrH v L Vv usage_00067.pdb 54 IEEGKYSLVMEYMEKGNLMHVLKAE--MSTPLSVKGRIILEIIEGMAYLHGKGVIHKDLK 111 usage_00085.pdb 52 SE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 110 usage_00174.pdb 53 SE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 111 usage_00186.pdb 52 SE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 110 usage_00192.pdb 50 SE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 108 usage_00214.pdb 53 TRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLA 111 usage_00427.pdb 48 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 106 e iV EYM kGsL fLk l qlv m i GMaY yvHrDL usage_00067.pdb 112 PENILVDNDFHIKIAD 127 usage_00085.pdb 111 AANILVGENLVCKV-- 124 usage_00174.pdb 112 AANILVGENLVCKV-- 125 usage_00186.pdb 111 AANILVGENLVCKV-- 124 usage_00192.pdb 109 AANILVGENLVCKV-- 122 usage_00214.pdb 112 ARNVLVDSNLVCKV-- 125 usage_00427.pdb 107 AANILVGENLVCKV-- 120 a NiLV nlvcKv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################