################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:47 2021 # Report_file: c_0362_55.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00278.pdb # 2: usage_00390.pdb # 3: usage_00391.pdb # # Length: 177 # Identity: 54/177 ( 30.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/177 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/177 ( 41.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00278.pdb 1 TNQDFAALWSSIAAKYADNDKIIFGVMNEPHDVPDINLWADSVQAAVTAIRQAG--ATSQ 58 usage_00390.pdb 1 NINTWAATVQEVVTAIRN------------------------------------AGATSQ 24 usage_00391.pdb 1 NINTWAATVQEVVTAIRN------------------------------------AGATSQ 24 nintwAAtvqevvtairn ATSQ usage_00278.pdb 59 IILLPGNNWTSAETFVSNGSADALKKVTNPDGSVTNLIFDVHKYLDSDNSGTHEECTTN- 117 usage_00390.pdb 25 FISLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSDNSGTHAECTTNN 84 usage_00391.pdb 25 FISLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSDNSGTHAECTTNN 84 fIsLPGNdWqSAgaFiSdGSAaALsqVTNPDGStTNLIFDVHKYLDSDNSGTHaECTTN usage_00278.pdb 118 ------------------------------NIDNAWAPLAEWLRCNG----RQAFN- 139 usage_00390.pdb 85 IDGAFSPLATWLRQNNRQAILTETGGGNVQSCIQDMCQQIQYLNQNSDVYLGYVGWG 141 usage_00391.pdb 85 IDGAFSPLATWLRQNNRQAILTETGGGNVQSCIQDMCQQIQYLNQNSDVYLGYVGWG 141 sciqdmcqqiqyLnqNs gyvgw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################