################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:42 2021 # Report_file: c_0141_19.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00100.pdb # 2: usage_00101.pdb # 3: usage_00145.pdb # 4: usage_00146.pdb # 5: usage_00147.pdb # 6: usage_00148.pdb # 7: usage_00245.pdb # 8: usage_00246.pdb # 9: usage_00345.pdb # 10: usage_00350.pdb # 11: usage_00351.pdb # 12: usage_00352.pdb # 13: usage_00353.pdb # # Length: 180 # Identity: 66/180 ( 36.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/180 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/180 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEF-SDASDVPILLDAD 59 usage_00101.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEF-SDASDVPILLDAD 59 usage_00145.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRASNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00146.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRASNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00147.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00148.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00245.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00246.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00345.pdb 1 -PLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADID 59 usage_00350.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00351.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00352.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 usage_00353.pdb 1 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 60 gLsArivqeAGFkGIWGSGlsvSAqlgVr sNeaSwtqvvEvlef sdasdvPillDaD usage_00100.pdb 60 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFP-KTNSLHDGRAQPLADIEEFALKIKACK 118 usage_00101.pdb 60 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFP-KTNSLHDGRAQPLADIEEFALKIKACK 118 usage_00145.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN-SLHDGRAQPLADIEEFALKIKACK 119 usage_00146.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN-SLHDGRAQPLADIEEFALKIKACK 119 usage_00147.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN-SLHDGRAQPLADIEEFALKIKACK 119 usage_00148.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN-SLHDGRAQPLADIEEFALKIKACK 119 usage_00245.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFP-KTNSLHDGRAQPLADIEEFALKIKACK 119 usage_00246.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFP-KTNSLHDGRAQPLADIEEFALKIKACK 119 usage_00345.pdb 60 TGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDT--------QELVRIEEFQGKIAAAT 111 usage_00350.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN--------QPLADIEEFALKIKACK 112 usage_00351.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTN-S---GRAQPLADIEEFALKIKACK 116 usage_00352.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPK----------QPLADIEEFALKIKACK 110 usage_00353.pdb 61 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFP-----------QPLADIEEFALKIKACK 109 TGyGNfnNarrlVrklEdrGvagaclEDKlFP QpLadIEEFalKIkAck usage_00100.pdb 119 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILHSKKADPSDIEAFK-A-- 175 usage_00101.pdb 119 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILHSKKADPSDIEAFK-AW- 176 usage_00145.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAW 179 usage_00146.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKA- 178 usage_00147.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKA- 178 usage_00148.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAW 179 usage_00245.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAW 179 usage_00246.pdb 120 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAW 179 usage_00345.pdb 112 AARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSW 171 usage_00350.pdb 113 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKA- 171 usage_00351.pdb 117 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKA- 175 usage_00352.pdb 111 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKA- 169 usage_00353.pdb 110 DSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAW 169 dsqtDpDFcivARVEAfIAGwGldEAlkRaeAYrnAGADAIL k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################