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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:25 2021
# Report_file: c_1184_25.html
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#====================================
# Aligned_structures: 8
#   1: usage_00876.pdb
#   2: usage_00877.pdb
#   3: usage_01281.pdb
#   4: usage_01282.pdb
#   5: usage_01283.pdb
#   6: usage_01445.pdb
#   7: usage_01671.pdb
#   8: usage_02145.pdb
#
# Length:         60
# Identity:        2/ 60 (  3.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     10/ 60 ( 16.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           36/ 60 ( 60.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00876.pdb         1  ----AMKTLLK-----------------SEMYKKLAGSDSPWVVSLYYSFQDAQYLYLI-   38
usage_00877.pdb         1  ---YAMKTLLK-----------------SEMYKK---SDSPWVVSLYYSFQDAQYLYLIM   37
usage_01281.pdb         1  GHLYAMKVL----------------ILA--------DVNHPFVVKLHYAFQTEGKLYLIL   36
usage_01282.pdb         1  GHLYAMKVLK--KA-------TLKVILA--------DVNHPFVVKLHYAFQTEGKLYLI-   42
usage_01283.pdb         1  GHLYAMKVLK---------------ILA--------DVNHPFVVKLHYAFQTEGKLYLI-   36
usage_01445.pdb         1  -----WCELQDF---KEEAEM-----LK--------GLQHPNIVRFYDSWESTCIVLV-T   38
usage_01671.pdb         1  GKIFAMKVLKK---------------------------KHPFIVDLIYAFQTGGKLYLI-   32
usage_02145.pdb         1  -RYYAMKILRK-EVIVTESRV-----LQ--------NTRHPFLTALKYAFQTHDRLCFVM   45
                                mk L                               P  v l y fq    l    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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