################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:30 2021 # Report_file: c_1076_85.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00016.pdb # 2: usage_00157.pdb # 3: usage_00185.pdb # 4: usage_00708.pdb # 5: usage_00709.pdb # 6: usage_00710.pdb # 7: usage_00711.pdb # 8: usage_00712.pdb # 9: usage_00713.pdb # 10: usage_00854.pdb # 11: usage_01212.pdb # 12: usage_01553.pdb # # Length: 60 # Identity: 1/ 60 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 60 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 60 ( 38.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 NPKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 51 usage_00157.pdb 1 NPKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 51 usage_00185.pdb 1 ---DVKAVAEAAAKHQ-VALEINFLHS--------NCREVAAAVRDAG--GWVALGSDSH 46 usage_00708.pdb 1 -PKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 50 usage_00709.pdb 1 -PKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRS- 49 usage_00710.pdb 1 NPKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 51 usage_00711.pdb 1 -PKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRS- 49 usage_00712.pdb 1 -PKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 50 usage_00713.pdb 1 NPKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 51 usage_00854.pdb 1 NPKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 51 usage_01212.pdb 1 --DEVASLVKKYQ---FGGIILF----AENVKTTKQTVQLTDDYQKASPKIPLMLSID-- 49 usage_01553.pdb 1 -PKRIATAIEKKA---ADALLLK----VNQIGTLSESIKAAQDSFAAG--WGVMVSHRSG 50 a ek a al l a d Ag vm s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################