################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:33 2021 # Report_file: c_0069_31.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00087.pdb # 2: usage_00088.pdb # 3: usage_00126.pdb # 4: usage_00127.pdb # # Length: 252 # Identity: 27/252 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/252 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/252 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 60 usage_00088.pdb 1 KVAIITAGGSGMGAASARRLAQDGFAVAILSSSGK-GEALAKELG-------GIGVTGSN 52 usage_00126.pdb 1 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLS--VTGTVCHV 58 usage_00127.pdb 1 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLS--VTGTVCHV 58 kvAlvTa GiG A ARrLaQdG Vv sr a l g c usage_00087.pdb 61 SNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTR 119 usage_00088.pdb 53 QSNDDLQKLVDQTLEKWGRIDVLVNS--AG--RAPILEITDEDWHKGMDTYFLNAVRPAR 108 usage_00126.pdb 59 GKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTK 118 usage_00127.pdb 59 GKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTK 118 eD lv hggiDilv n i t e W k d nv a t usage_00087.pdb 120 EAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTH 179 usage_00088.pdb 109 LVVPAMQKQKS--GVIINISTAWAFEPS-A-MFPTSAVFRAGLASFTKIFADTYAA--EN 162 usage_00126.pdb 119 AVVPEMEKRGG--GSVVIVSSIAAFSPS-P-GFSPYNVSKTALLGLTKTLAIELAP--RN 172 usage_00127.pdb 119 AVVPEMEKRGG--GSVVIVSSIAAFSPS-P-GFSPYNVSKTALLGLTKTLAIELAP--RN 172 vvp M kr G ss af ps f y v k al lTk la ela n usage_00087.pdb 180 IRATCISPGVVET---QFAF------------KLH---MKCLKPEDVAEAVIYVLSTPAH 221 usage_00088.pdb 163 IRMNNVLPGWIDS-------LPT-----TEERRESVPMQRYGKSEEIAATVSFLASD-G- 208 usage_00126.pdb 173 IRVNCLAPGLIKTSFSRMLW---MDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE-D- 227 usage_00127.pdb 173 IRVNCLAPGLIKTSFSRMLW---MDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE-D- 227 IR nc PG i t ke r g pEd A Vsfl S usage_00087.pdb 222 IQ-I-GDIQMRP 231 usage_00088.pdb 209 AAYITGQNLRVD 220 usage_00126.pdb 228 ASYITGETVVVG 239 usage_00127.pdb 228 ASYITGETVVVG 239 a I G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################