################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:20 2021 # Report_file: c_0558_19.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00102.pdb # 2: usage_00103.pdb # 3: usage_00104.pdb # 4: usage_00105.pdb # 5: usage_00106.pdb # 6: usage_00107.pdb # 7: usage_00109.pdb # 8: usage_00110.pdb # 9: usage_00127.pdb # 10: usage_00128.pdb # 11: usage_00129.pdb # 12: usage_00192.pdb # 13: usage_00325.pdb # # Length: 97 # Identity: 74/ 97 ( 76.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 97 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 97 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 ----KVVKFSYMWTINNFSFCREEMG-EVIKSSTFSSG--DKLKWCLRVNPKGLDEESKD 53 usage_00103.pdb 1 S---KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSN--DKLKWCLRVNPKGLD--SKD 52 usage_00104.pdb 1 ----KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSG---KLKWCLRVNPKGLD--SKD 50 usage_00105.pdb 1 ----KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSS----KLKWCLRVNPKGLDEESKD 51 usage_00106.pdb 1 ----KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSG--DKLKWCLRVNPKGLDEESKD 53 usage_00107.pdb 1 ------VKFSYMWTINNFSFCREE-MGEVIKSSTFSS----KLKWCLRVNPKGLDEESKD 49 usage_00109.pdb 1 ----KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSS-----LKWCLRVNPKGLDEESKD 50 usage_00110.pdb 1 S---KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSG---KLKWCLRVNPKGLDEESKD 53 usage_00127.pdb 1 ----KVVKFSYMWTINNFSFCREEMG-EVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD 55 usage_00128.pdb 1 -GSGKVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSG--AKLKWCLRVNPKGLDEESKD 56 usage_00129.pdb 1 ------VKFSYMWTINNFSFCREE-MGEVIKSSTFSS---GKLKWCLRVNPKGLDEESKD 50 usage_00192.pdb 1 --------FSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD 51 usage_00325.pdb 1 --------FSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD 51 FSYMWTINNFSFCREE EVIKSSTFSS LKWCLRVNPKGLD SKD usage_00102.pdb 54 YLSLYLLLVSCP--EVRAKFKFSILNAKGEETKAMES 88 usage_00103.pdb 53 YLSLYLLLVSCP-KEVRAKFKFSILNAKGEETKAMES 88 usage_00104.pdb 51 YLSLYLLLVSCP-KEVRAKFKFSILNAKGEETKAMES 86 usage_00105.pdb 52 YLSLYLLLVSCK-SEVRAKFKFSILNAKGEETKAMES 87 usage_00106.pdb 54 YLSLYLLLVSCP-SEVRAKFKFSILNAKGEETKAMES 89 usage_00107.pdb 50 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 86 usage_00109.pdb 51 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 87 usage_00110.pdb 54 YLSLYLLLVSCP-KEVRAKFKFSILNK-GEETKAMES 88 usage_00127.pdb 56 YLSLYLLLVSCP-KEVRAKFKFSILNAKGEETKAMES 91 usage_00128.pdb 57 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 93 usage_00129.pdb 51 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 87 usage_00192.pdb 52 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 88 usage_00325.pdb 52 YLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMES 88 YLSLYLLLVSCp EVRAKFKFSILNa GEETKAMES #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################