################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:09 2021 # Report_file: c_0891_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00039.pdb # 4: usage_00058.pdb # 5: usage_00161.pdb # 6: usage_00216.pdb # # Length: 86 # Identity: 23/ 86 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 86 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 86 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 --KADIWSLGITAIELAKGEPPNSDMH-PMRVLFLIPKNNPPTLV--G--------DFTK 47 usage_00024.pdb 1 --KADIWSLGITAIELAKGEPPNSDMH-PMRVLFLIPKNNPPTLV--G--------DFTK 47 usage_00039.pdb 1 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM--------GFSG 52 usage_00058.pdb 1 DFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDP-PSLE-TG----MLKKYGK 53 usage_00161.pdb 1 DFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLET-GVQDKEMLKKYGK 58 usage_00216.pdb 1 ----DIWSLGITAIELAKGEPPNSDMH-PMRVLFLIPKNNPPTLV--G--------DFTK 45 DiWS GItaiELA G P pm VL l n P l k usage_00023.pdb 48 SFKEFIDACLNKDPSFRPTAKELLKH 73 usage_00024.pdb 48 SFKEFIDACLNKDPSFRPTAKELLKH 73 usage_00039.pdb 53 DFQSFVKDCLTKDHRKRPKYNKLLEH 78 usage_00058.pdb 54 SFRKMISLCLQKDPEKRPTAAELLRH 79 usage_00161.pdb 59 SFRKMISLCLQKDPEKRPTAAELLRH 84 usage_00216.pdb 46 SFKEFIDACLNKDPSFRPTAKELLKH 71 sF i CL KDp RPta eLL H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################