################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:59 2021 # Report_file: c_1428_43.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00088.pdb # 2: usage_00360.pdb # 3: usage_00568.pdb # 4: usage_00688.pdb # 5: usage_00689.pdb # 6: usage_00831.pdb # 7: usage_00832.pdb # 8: usage_00833.pdb # 9: usage_01416.pdb # 10: usage_01417.pdb # 11: usage_01418.pdb # 12: usage_01419.pdb # 13: usage_01989.pdb # 14: usage_01990.pdb # 15: usage_01991.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 79 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/ 79 ( 81.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 ---EVGYWDKQDH---PISRLRHYLLSQG-----WWDEEQEKAWRKQSRRKVMEAFEQAE 49 usage_00360.pdb 1 --SPEEFKEE-LDKLDYFELFKEYLKKREENHEK--LLKILDELLDEVKKS--------- 46 usage_00568.pdb 1 ------------------------------------RELFEEQAKRRVVVGLLLGEVIRT 24 usage_00688.pdb 1 PKEEVAFWRK-KD---PIPRFRRFLEARG-----LWNEEWEEDVREEIRAELERGLKEAE 51 usage_00689.pdb 1 -KEEVAFWRK-KD---PIPRFRRFLEARG-----LWNEEWEEDVREEIRAELERGLKEAE 50 usage_00831.pdb 1 SKELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 51 usage_00832.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 usage_00833.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 usage_01416.pdb 1 SKELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 51 usage_01417.pdb 1 SKELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 51 usage_01418.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 usage_01419.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 usage_01989.pdb 1 --ELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 49 usage_01990.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 usage_01991.pdb 1 -KELENEWAK-KD---PLVRFRKFLEAKG-----LWSEEEENNVIEQAKEEIKEAIKKAD 50 e e usage_00088.pdb 50 RK----------------- 51 usage_00360.pdb ------------------- usage_00568.pdb 25 HELKADEEKVKALITEMAT 43 usage_00688.pdb 52 EA----------------- 53 usage_00689.pdb 51 EA----------------- 52 usage_00831.pdb 52 ET----------------- 53 usage_00832.pdb 51 ET----------------- 52 usage_00833.pdb 51 ET----------------- 52 usage_01416.pdb 52 ET----------------- 53 usage_01417.pdb 52 ET----------------- 53 usage_01418.pdb 51 ET----------------- 52 usage_01419.pdb 51 ET----------------- 52 usage_01989.pdb 50 ET----------------- 51 usage_01990.pdb 51 ET----------------- 52 usage_01991.pdb 51 ET----------------- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################