################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:31 2021 # Report_file: c_0693_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00089.pdb # 2: usage_00111.pdb # 3: usage_00178.pdb # 4: usage_00179.pdb # 5: usage_00181.pdb # 6: usage_00601.pdb # # Length: 96 # Identity: 1/ 96 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 96 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/ 96 ( 64.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 KIILSHQSD--GTFRAFINSCTHRGNQICHADSGNAKAFVCNY----------------- 41 usage_00111.pdb 1 -----------AYRIALG------TTYYY-----DDNWTFRTGIAFDDSPVPAQNRSISI 38 usage_00178.pdb 1 -----------TQNLEVV------AQYQF-----DFGLRPAISYVQSKGKQLNGA--GG- 35 usage_00179.pdb 1 ---------NKTQNLEVV------AQYQF-----DFGLRPAISYVQSKGKQLNGA--GG- 37 usage_00181.pdb 1 ---------NKTQNLEVV------AQYQF-----DFGLRPAISYVQSKGKQLNGA--GG- 37 usage_00601.pdb 1 ---------NKTQNLEVV------AQYQF-----DFGLRPAISYVQSKGKQLNGA--GG- 37 y d usage_00089.pdb 42 -------HG----WVYGQDG-----SLVDVP--L-- 57 usage_00111.pdb 39 P--DQDRFWLSAGTTYAF--NKDA-SVDVGVSYMHG 69 usage_00178.pdb 36 SAD--LAKYIQAGATYYF--NKNM-NVWVDYRFN-- 64 usage_00179.pdb 38 SAD--LAKYIQAGATYYF--NKNM-NVWVDYRF--- 65 usage_00181.pdb 38 SAD--LAKYIQAGATYYF--NKNM-NVWVDYRF--- 65 usage_00601.pdb 38 SAD--LAKYIQAGATYYF--NKNNVWVDYRFN---- 65 tY f v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################