################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:22 2021 # Report_file: c_0034_26.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00045.pdb # 2: usage_00130.pdb # 3: usage_00178.pdb # 4: usage_00208.pdb # # Length: 244 # Identity: 48/244 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/244 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/244 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 KIALITGASYGIGFEIAKAYAQAGATIVFNDIKQELVDKGLAAYRELGIEAHGYVCDVTD 60 usage_00130.pdb 1 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTD 60 usage_00178.pdb 1 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS 60 usage_00208.pdb 1 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD 60 k ALvTG s GiGf ia A aGA ndi q l G ahg vcDvtd usage_00045.pdb 61 EAGIQQMVSQIEDEVG-AIDILVNNAGIIRRTPMLEMAAEDFRQVIDIDLNAPFIVSKAV 119 usage_00130.pdb 61 EDGIQAMVAQIESEVG-IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAV 119 usage_00178.pdb 61 RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 120 usage_00208.pdb 61 ELAIEAAFSKLDAEGI-HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSA 119 e iq e dILvNNAGI r pm e e vidi l a f vS usage_00045.pdb 120 LPSMIAKGHGKI-INICSMMSELGRETVSAYAAAKGGLKMLTKNIASEFGEANIQCNGIG 178 usage_00130.pdb 120 IPSMIKKGHGKI-INICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIG 178 usage_00178.pdb 121 HPFLKASERGNV-VFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVG 179 usage_00208.pdb 120 AKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 179 p mia G inI S s l r tv Y AaKGg kmLT A E NIq NgiG usage_00045.pdb 179 PGYIATPQTAPLRE--RR-HPFDQFIIAKTPAARWGTTEDLAGPAVFLASDASNFVNGHI 235 usage_00130.pdb 179 PGYIATPQTAPLRE--L--HPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHI 234 usage_00178.pdb 180 PGVIATSLVEMTIQDPE-QKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQI 238 usage_00208.pdb 180 PGYILTDMNTALIE----DKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQI 235 PGyIaT l e fd i tp RwG e L g a FL s As vnG I usage_00045.pdb 236 LYV- 238 usage_00130.pdb 235 LYV- 237 usage_00178.pdb 239 IYVD 242 usage_00208.pdb 236 IYVD 239 YV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################