################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:36 2021 # Report_file: c_0260_24.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00062.pdb # 3: usage_00076.pdb # 4: usage_00081.pdb # 5: usage_00176.pdb # 6: usage_00177.pdb # # Length: 127 # Identity: 10/127 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/127 ( 12.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/127 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---CGFSTGYGSAVKVA-K--VTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKD 54 usage_00062.pdb 1 PVLCAGVTVYKGLK-MT-D--TKPGDWVVISGIGGLGHMAVQYAIA-MGLNVAAVDIDDD 55 usage_00076.pdb 1 -LTDAGLTPYHAIS-R-VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDD 57 usage_00081.pdb 1 ---DMMTTGFHGAE-LA-D--IQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPI 53 usage_00176.pdb 1 ---CAGVTTYKAVK-LS-K--IRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDE 53 usage_00177.pdb 1 ---CAGVTTYKAVK-LS-K--IRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDE 53 T y G G Gg G i d usage_00001.pdb 55 KFAKAKEVGATECVNPQDYKKPIQEVLTEMSN-GGVDFSFEVIGRLDTMVTALSCCQEAY 113 usage_00062.pdb 56 KLAFAKKLGAKVTVNAKNT--DPAEYLQKEIG--GAHGALVTAVSAKAFDQALSMLRRGG 111 usage_00076.pdb 58 RLALAREVGADAAVKSGA---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG 114 usage_00081.pdb 54 CVEAAKFYGATDILNYKNG--HIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGG 111 usage_00176.pdb 54 QLKLATEMGADLAINSHTE--DAAKIVQEKTG--GAHAAVVTAVAKAAFNSAVDAVRAGG 109 usage_00177.pdb 54 QLKLATEMGADLAINSHTE--DAAKIVQEKTG--GAHAAVVTAVAKAAFNSAVDAVRAGG 109 A GA n G A g usage_00001.pdb 114 GVSVI-- 118 usage_00062.pdb 112 TLV-CNG 117 usage_00076.pdb 115 HIS-VV- 119 usage_00081.pdb 112 IIS-NI- 116 usage_00176.pdb 110 RVV-AV- 114 usage_00177.pdb 110 RVV-AV- 114 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################