################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:00 2021 # Report_file: c_1488_295.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00604.pdb # 2: usage_00860.pdb # 3: usage_02242.pdb # 4: usage_03797.pdb # 5: usage_03799.pdb # 6: usage_03800.pdb # 7: usage_06495.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 38 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 38 ( 44.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00604.pdb 1 -TPVGEGIVAQAQKVLEQAQGIREL------AQAGK-- 29 usage_00860.pdb 1 ------TVFQQAQNDERDRVYFDPAVSQAKADG----- 27 usage_02242.pdb 1 ----NWGQAFQERYTAGINSFVSGV------AS---GA 25 usage_03797.pdb 1 NSQGQAMVERANRLLKDKIRVLAEG------DG----- 27 usage_03799.pdb 1 NSQGQAMVERANRLLKDKIRVLAEG------DG----- 27 usage_03800.pdb 1 NSQGQAMVERANRLLKDKIRVLAEG------DG----- 27 usage_06495.pdb 1 ----SGKVERKNSDIKRLLTKLLVG------RP----- 23 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################