################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:59 2021 # Report_file: c_0054_29.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00074.pdb # 2: usage_00075.pdb # 3: usage_00220.pdb # 4: usage_00221.pdb # 5: usage_00222.pdb # # Length: 248 # Identity: 105/248 ( 42.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/248 ( 42.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/248 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 DIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEE 60 usage_00075.pdb 1 DIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEE 60 usage_00220.pdb 1 DIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNT-LSVCGEPYDTLHD 59 usage_00221.pdb 1 DIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNT-LSVCGEPYDTLHD 59 usage_00222.pdb 1 DIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNT-LSVCGEPYDTLHD 59 DIGRD L VYA VF E LVRP GTHA ALFG LRPG L G PYDTL usage_00074.pdb 61 IVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH---S-NTKIGIQRSKGYATR 116 usage_00075.pdb 61 IVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH---S-NTKIGIQRSKGYATR 116 usage_00220.pdb 60 VIGITENSNGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESIT-LVHIQRSTGYGWR 118 usage_00221.pdb 60 VIGITENSNGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESIT-LVHIQRST---WR 115 usage_00222.pdb 60 VIGITENSNGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESIT-LVHIQRSTGYGWR 118 G GS KE I Y V L E G E S IQRS R usage_00074.pdb 117 PSFTISQIKE-IAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLAGSLIKNPGGGIVK 175 usage_00075.pdb 117 PSFTISQIKE-IAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLAGSLIKNPGGGIVK 175 usage_00220.pdb 119 RALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF-DTKEPTDVGADLIAGSLINIGGGIAP 177 usage_00221.pdb 116 RALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF-DTKEPTDVGADLIAGSLINIGGGIAP 174 usage_00222.pdb 119 RALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF-DTKEPTDVGADLIAGSLINIGGGIAP 177 I IK VK I D FVDNCYGEF EP VGADL N GGGI usage_00074.pdb 176 TGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEYQGFFLAPHVAGQALKGAIFTAA 235 usage_00075.pdb 176 TGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEYQGFFLAPHVAGQALKGAIFTAA 235 usage_00220.pdb 178 TGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSYQGLFLAPHISEALKGAILCSR- 236 usage_00221.pdb 175 TGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSYQGLFLAPHISEALKGAILCSR- 233 usage_00222.pdb 178 TGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSYQGLFLAPHISEALKGAILCSR- 236 TGGY G E YRLT PGIG E G YQG FLAPH usage_00074.pdb 236 FLE-KLG- 241 usage_00075.pdb 236 FLE-KLG- 241 usage_00220.pdb 237 IELA---- 240 usage_00221.pdb 234 IELA---G 238 usage_00222.pdb 237 IELA---G 241 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################