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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:55:27 2021
# Report_file: c_1097_6.html
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#====================================
# Aligned_structures: 3
#   1: usage_00260.pdb
#   2: usage_00480.pdb
#   3: usage_00481.pdb
#
# Length:        173
# Identity:       65/173 ( 37.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    106/173 ( 61.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           67/173 ( 38.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00260.pdb         1  PDMA----FEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKCTKKLANFPRLC-----EE   51
usage_00480.pdb         1  ----VKKQVKKI--------REPCLKCVDMVISELISTVRQCT----------KKQYPR-   37
usage_00481.pdb         1  ----VKKQVKKI--------REPCLKCVDMVISELISTVRQCT----------KKQYPR-   37
                                   vkkI        rePcLKcVDmVIsELIsTVrqCT               r 

usage_00260.pdb        52  TERI----VANHIREREGKTKDQVLLLIDIQVSYINTNHED-FIG------------PQL   94
usage_00480.pdb        38  LREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFI--GFERVGPQLERQVET   95
usage_00481.pdb        38  LREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFI--GFERVGPQLERQVET   95
                           lree    VttHIREREGrTKeQVmLLIDIelaYmNTNHED i              vet

usage_00260.pdb        95  ERQVETIRNL-VDSYMSIINKCIRDLIPKTIMHLMINNVKDFINS--------  138
usage_00480.pdb        96  I-------RNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS  141
usage_00481.pdb        96  I-------RNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS  141
                           i       rn VDSYMaIvNKtvRDLmPKTIMHLMINNtKeFIfS        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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