################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:20 2021 # Report_file: c_1484_523.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00003.pdb # 2: usage_00497.pdb # 3: usage_02794.pdb # 4: usage_02910.pdb # 5: usage_03143.pdb # 6: usage_03935.pdb # 7: usage_03937.pdb # 8: usage_03939.pdb # 9: usage_03940.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 34 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 34 ( 76.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----GP-ELALQKLGKTP-----LGRYLFTSS-- 22 usage_00497.pdb 1 LSGA---------E----DVY--TSLGQLR---- 15 usage_02794.pdb 1 ----TPLILAARLA----LEG--MLEDLINS-H- 22 usage_02910.pdb 1 -----ALHWCVGLG----P-EYLEIKILVQL-G- 22 usage_03143.pdb 1 ----TPLHAAAQMG----HNP--VLVWLVSF-AD 23 usage_03935.pdb 1 ----SPLHFAAGFG----RKD--VVEHLLQM-G- 22 usage_03937.pdb 1 ----SPLHFAAGFG----RKD--VVEHLLQM-G- 22 usage_03939.pdb 1 ----SPLHFAAGFG----RKD--VVEHLLQM-G- 22 usage_03940.pdb 1 ----SPLHFAAGFG----RKD--VVEHLLQM-G- 22 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################