################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:02 2021 # Report_file: c_1488_320.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00276.pdb # 2: usage_01623.pdb # 3: usage_02852.pdb # 4: usage_02853.pdb # 5: usage_02886.pdb # 6: usage_02887.pdb # 7: usage_02894.pdb # 8: usage_02895.pdb # 9: usage_03412.pdb # 10: usage_04191.pdb # 11: usage_05269.pdb # 12: usage_05888.pdb # 13: usage_05889.pdb # 14: usage_07208.pdb # 15: usage_08442.pdb # # Length: 13 # Identity: 0/ 13 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 13 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 13 ( 53.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00276.pdb 1 ----PLDKSLTL- 8 usage_01623.pdb 1 ----KPAGRPLVD 9 usage_02852.pdb 1 DPA---DNPLKN- 9 usage_02853.pdb 1 DPA---DNPLKN- 9 usage_02886.pdb 1 DPA---DNPLKN- 9 usage_02887.pdb 1 DPA---DNPLKNA 10 usage_02894.pdb 1 DPA---DNPLKN- 9 usage_02895.pdb 1 DPA---DNPLKN- 9 usage_03412.pdb 1 -DP---GSSIARR 9 usage_04191.pdb 1 ----NPEEAKVDN 9 usage_05269.pdb 1 ---N-AADTALLA 9 usage_05888.pdb 1 -DS---DHPMSD- 8 usage_05889.pdb 1 -DS---DHPMSD- 8 usage_07208.pdb 1 ----GVGDLPTRN 9 usage_08442.pdb 1 -DP---DDPAVIY 9 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################