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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:24:28 2021
# Report_file: c_1138_5.html
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#====================================
# Aligned_structures: 6
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00076.pdb
#   4: usage_00081.pdb
#   5: usage_00082.pdb
#   6: usage_00184.pdb
#
# Length:        129
# Identity:       33/129 ( 25.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    113/129 ( 87.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           15/129 ( 11.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  DTKEVLEAREAYFKSLGGSMKAMTGVA-K---AFDAEAAKVEAAKLEKILATDVAPLFPA   56
usage_00005.pdb         1  -TKEVLEAREAYFKSLGGSMKAMTGVA-K---AFDAEAAKVEAAKLEKILATDVAPLFPA   55
usage_00076.pdb         1  -PEDAVKYRQSALTLMASHFGRMTPVVKGQAP-YDAAQIKANVEVLKTLTALP-WAAFGP   57
usage_00081.pdb         1  -TKEVLEAREAYFKSLGGSMKAMTGVA-K---AFDAEAAKVEAAKLEKILATDVAPLFPA   55
usage_00082.pdb         1  DTKEVLEAREAYFKSLGGSMKAMTGVA-K---AFDAEAAKVEAAKLEKILATDVAPLFPA   56
usage_00184.pdb         1  -TKEVLEAREAYFKSLGGSMKAMTGVA-K---AFDAEAAKVEAAKLEKILATDVAPLFPA   55
                            tkevleaReayfkslggsmkaMTgVa k    fDAeaaKveaakLekilAtd aplFpa

usage_00004.pdb        57  GTSSTDLPGQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGT  116
usage_00005.pdb        56  GTSSTDLPGQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGT  115
usage_00076.pdb        58  GTEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGAS  111
usage_00081.pdb        56  GTSSTDLPGQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGT  115
usage_00082.pdb        57  GTSSTDLPGQTEAKAAIWANMDDFGAKGKAMHDAGGAVIAAANAGDGAAFGAALQKLGGT  116
usage_00184.pdb        56  GTSSTDLPGQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGT  115
                           GTss      teAkaaIWanmddFgaKgkAmh aggaviAAAnAGDgaafgAAlqklGgt

usage_00004.pdb       117  CKACHDDY-  124
usage_00005.pdb       116  CKACHDDY-  123
usage_00076.pdb       112  CKACHDA--  118
usage_00081.pdb       116  CKACHDDYR  124
usage_00082.pdb       117  CKACHDDYR  125
usage_00184.pdb       116  CKACHDDY-  123
                           CKACHDd  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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