################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:13 2021 # Report_file: c_0152_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00055.pdb # 3: usage_00056.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00082.pdb # 7: usage_00214.pdb # 8: usage_00215.pdb # 9: usage_00224.pdb # # Length: 121 # Identity: 32/121 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/121 ( 56.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/121 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --VLTQSPSSLAVSLGQRATISCRASQSVST-SSFRYMHWYQQKPGQPPRLLIKY----- 52 usage_00055.pdb 1 ---VLTQPTSLSASPGASARLSCTLSS-GF-TVGRYSIFWYQQKPGSPPRYLLYYFSDSS 55 usage_00056.pdb 1 DIVLTQSPASLAVSLGQRATISYRASKSVS------YMHWNQQKPGQPPRLLIYL----- 49 usage_00066.pdb 1 DIVMTQSPASLAVSLGQRATISCRASQSVST-SSYSYMNWYQQKPGQPPKLLIKY----- 54 usage_00067.pdb 1 DIVMTQSPASLAVSLGQRATISCRASQSVST-SSYSYMNWYQQKPGQPPKLLIKY----- 54 usage_00082.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKGVST-SGYSYLHWYQQKPGQAPRLLIYL----- 54 usage_00214.pdb 1 DIVMTQSPASLAVSLGQRATISCRASQSVST-SSYSYMNWYQQKPGQPPKLLIKY----- 54 usage_00215.pdb 1 DIVMTQSPASLAVSLGQRATISCRASQSVST-SSYSYMNWYQQKPGQPPKLLIKY----- 54 usage_00224.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVDN-YGNSFMHWYQQKPGQPPKLLIYR----- 52 tqsP sL S G rAt ScraS v WyQQKPGqpP lLi usage_00006.pdb 53 ASNLESGVPARFSGSG-S-GTDFTLNIHPVEEEDTATYYCQHSWEIPYTFGGGTKLEIKR 110 usage_00055.pdb 56 -QHQGSGVPSRFSGSKDASANAGLLLISGLQSEDEADYHCAIWHSGAWVFGGGTRLTV-- 112 usage_00056.pdb 50 GSNLESGVGARFSGSG-S-GTDFTLNIHPVEEEDAATYYCQHKREYPPTFGQGTKVEI-- 105 usage_00066.pdb 55 ASNLESGVPARFSGSG-S-GTDFTLNIHPLEEEDTATYYCQHSWEIPWTFGGGTKVEI-- 110 usage_00067.pdb 55 ASNLESGVPARFSGSG-S-GTDFTLNIHPLEEEDTATYYCQHSWEIPWTFGGGTKVEI-- 110 usage_00082.pdb 55 ASYLESGVPARFSGSG-S-GTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEI-- 110 usage_00214.pdb 55 ASNLESGVPARFSGSG-S-GTDFTLNIHPLEEEDTATYYCQHSWEIPWTFGGGTKVEI-- 110 usage_00215.pdb 55 ASNLESGVPARFSGSG-S-GTDFTLNIHPLEEEDTATYYCQHSWEIPWTFGGGTKVEI-- 110 usage_00224.pdb 53 ASNLESGIPVRFSGSG-S-RTDFTLTINPVEADDVATYYCQQSNEDPRTFGGGTKLEI-- 108 s leSGvp RFSGSg s tdftL I e eD A YyCq p tFGgGTk ei usage_00006.pdb 111 A 111 usage_00055.pdb - usage_00056.pdb - usage_00066.pdb - usage_00067.pdb - usage_00082.pdb - usage_00214.pdb - usage_00215.pdb - usage_00224.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################