################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:29 2021 # Report_file: c_0456_24.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00188.pdb # 2: usage_00189.pdb # 3: usage_00190.pdb # 4: usage_00193.pdb # # Length: 96 # Identity: 17/ 96 ( 17.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 96 ( 36.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 96 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 -EPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTV 59 usage_00189.pdb 1 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIR 60 usage_00190.pdb 1 -THWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVK 59 usage_00193.pdb 1 -THWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVK 59 W VDFyaPWs Psq PE ar G G vDC y C i aYP usage_00188.pdb 60 VFNQ-------SSIHEYEGHHSAEQILEFIEDLR-- 86 usage_00189.pdb 61 FYPQKSSKAYQYHSY-NGWNRDAYSLRSWGLGFL-- 93 usage_00190.pdb 60 LYQYERAKK-SIWEE-QINSRDAKTIAALIYGKLET 93 usage_00193.pdb 60 LYQYERAKK-SIWEE-QINSRDAKTIAALIYGKLET 93 y rdA i i g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################