################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:15 2021 # Report_file: c_1182_59.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00173.pdb # 2: usage_00280.pdb # 3: usage_00662.pdb # 4: usage_00704.pdb # 5: usage_00705.pdb # 6: usage_00706.pdb # 7: usage_00707.pdb # 8: usage_00708.pdb # 9: usage_00709.pdb # 10: usage_00773.pdb # 11: usage_00785.pdb # 12: usage_00825.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 30 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 30 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00173.pdb 1 -LKDIIAAVTPCKGADFEL-QALKIRQPQG 28 usage_00280.pdb 1 QVITCKAAVAYEPNKPLVI-EDVQVAPPQA 29 usage_00662.pdb 1 HIAKKKVPFVNEQGIVIHPSENNGIK---K 27 usage_00704.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVAP--- 26 usage_00705.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVAP--- 26 usage_00706.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVA---- 25 usage_00707.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVAP--- 26 usage_00708.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVAP--- 26 usage_00709.pdb 1 QVITCKAAVAWEPNKPLVI-EDVQVAP--- 26 usage_00773.pdb 1 QVITCKAAVAYEPNKPLVI-EDVQVAPPQA 29 usage_00785.pdb 1 DTRAVTAAVARAAGAPFSI-EPARIRAPRG 29 usage_00825.pdb 1 QVITCKAAVAYEPNKPLVI-EDVQVAPPQA 29 aav e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################