################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:45 2021 # Report_file: c_0815_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00006.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00041.pdb # 5: usage_00103.pdb # 6: usage_00104.pdb # # Length: 49 # Identity: 7/ 49 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 49 ( 51.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 49 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 PGSSGSPIYSPEKRVLGQLHGGPSSCSATGTN-RSDQYGRVFTSWTG-- 46 usage_00013.pdb 1 GGDSGGPWLTG-SQAQGVTSGGTGDCRS----GGITFFQPINPLLSYF- 43 usage_00014.pdb 1 GGDSGGPWLTG-SQAQGVTSGGTGDCRS----GGITFFQPINPLLSYF- 43 usage_00041.pdb 1 PGDSGGSLLAG-NQAQGVTSGGSGNCRT----GGTTFFQPVNPILQAY- 43 usage_00103.pdb 1 PGDSGGSFISG-TQAQGVTSGGSGNCRT----GGTTFYQEVNPMLNSWN 44 usage_00104.pdb 1 PGDSGGSFISG-TQAQGVTSGGSGNCRT----GGTTFYQEVNPMLNSWN 44 GdSGg g qaqGvtsGG g Cr g tf q np l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################