################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:31 2021 # Report_file: c_1382_47.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00105.pdb # 2: usage_00137.pdb # 3: usage_00138.pdb # 4: usage_00342.pdb # 5: usage_00343.pdb # 6: usage_00406.pdb # 7: usage_00407.pdb # 8: usage_00408.pdb # 9: usage_00409.pdb # 10: usage_00410.pdb # 11: usage_00411.pdb # 12: usage_00462.pdb # 13: usage_00615.pdb # 14: usage_00641.pdb # 15: usage_00876.pdb # 16: usage_00877.pdb # 17: usage_00880.pdb # 18: usage_01335.pdb # 19: usage_01615.pdb # 20: usage_01616.pdb # # Length: 59 # Identity: 1/ 59 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 59 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 59 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 -----IPVLAAMIAQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDL------- 43 usage_00137.pdb 1 -----IPVLYNMISQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEAC---- 46 usage_00138.pdb 1 QKAHVMSVLHEMLQQIFSLFHT-ERS---SAAWQMTLLDQLHTGLHQQLQHLET----- 50 usage_00342.pdb 1 QKAETIPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQG 55 usage_00343.pdb 1 ------PVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQG 49 usage_00406.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00407.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00408.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00409.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00410.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00411.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00462.pdb 1 ---------NAVIKEAVDFIVS-KDV---LALGKKERLERLYHELINK----------- 35 usage_00615.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDL------- 43 usage_00641.pdb 1 ----TIPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 50 usage_00876.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQ- 49 usage_00877.pdb 1 -----IPVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLND-------- 42 usage_00880.pdb 1 ------PVLHEMIQQIFNLFST-KDS---SAAWDETLLDKFYTELYQQLNDLEACVIQG 49 usage_01335.pdb 1 ---SPFCRYRITSVCNFFTYIRYI-QQGLVKQQDVDQMFWEVMQLRKEMSLAKLG---- 51 usage_01615.pdb 1 -----ISVLHELIQQIFNLFTT-KDS---SAAWDEDLLDKFCTELYQQLNDLEACV--- 47 usage_01616.pdb 1 -----ISVLHELIQQIFNLFTT-KDS---SAAWDEDLLDKFCTELYQQLNDLEACV--- 47 f a l L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################