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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:56:24 2021
# Report_file: c_0152_8.html
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#====================================
# Aligned_structures: 13
#   1: usage_00057.pdb
#   2: usage_00092.pdb
#   3: usage_00093.pdb
#   4: usage_00123.pdb
#   5: usage_00124.pdb
#   6: usage_00125.pdb
#   7: usage_00126.pdb
#   8: usage_00142.pdb
#   9: usage_00200.pdb
#  10: usage_00204.pdb
#  11: usage_00228.pdb
#  12: usage_00229.pdb
#  13: usage_00230.pdb
#
# Length:        109
# Identity:       45/109 ( 41.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     63/109 ( 57.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/109 (  5.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00057.pdb         1  EIVMTQSPKFMSTSIGDRVNITCKATQNVRTAVTWYQQKPGQSPQALIFLASNRHTGVPA   60
usage_00092.pdb         1  --VLTQSPKSMSMSVGEKVTLSCKASENVDTYVSWYQQRPEQPPALLIYGASNRYTGVPD   58
usage_00093.pdb         1  DIVMTQSPKSMGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPD   60
usage_00123.pdb         1  DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD   60
usage_00124.pdb         1  DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD   60
usage_00125.pdb         1  DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD   60
usage_00126.pdb         1  DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD   60
usage_00142.pdb         1  -IVMTQTPKFLLVSAGDKVTITCKASQSVSNDLTWYQQKPGQSPKLLIYYASNRYTGVPD   59
usage_00200.pdb         1  ---MTQSPKFMSTSVGDRVTITCKASQDVSTAVVWYQQKPGQSPKLLIYWASTRHIGVPD   57
usage_00204.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVRIAVAWYQQKPGQSPKLLIYWASTRHTGVPD   60
usage_00228.pdb         1  DIEMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLLYSASYRYTGVPD   60
usage_00229.pdb         1  DIEMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLLYSASYRYTGVPD   60
usage_00230.pdb         1  DIQMIQSQKFMSTSVGDRVTVTCKASQNVGTNVAWYQQKPGQSPNALIYSASYRYSGVPD   60
                              mtQs K m  S G  V   CKAs  V   v WYQQkPgQsP  L y AS R  GVPd

usage_00057.pdb        61  RFTGSGSGTDFTLTINNVKSEDLADYFCLQHWNYPLTFGSGTKLEIKRA  109
usage_00092.pdb        59  RFTGSGSATDFTLTISSVQAEDLADYHCGQSYSYPLTFGGGTKLEL---  104
usage_00093.pdb        61  RFTGSGSATDFTLTISSVQADDDADYYCGQSYSSPLTFGGGTKLEL---  106
usage_00123.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEIKRA  109
usage_00124.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEIKRA  109
usage_00125.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEIKRA  109
usage_00126.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEIKRA  109
usage_00142.pdb        60  RFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYGSPPTFGGGTKVEIKRT  108
usage_00200.pdb        58  RFAGSGSGTDYTLTISSVQAEDLALYYCQQHYSPPWTFGGGTKLEI---  103
usage_00204.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCQHCGSYPFTFGSGTKLEI---  106
usage_00228.pdb        61  RFTGSGSGTDFTFTISSVNAEDLAVYYCQQHYSTPWTFGGGTKVEI---  106
usage_00229.pdb        61  RFTGSGSGTDFTFTISSVNAEDLAVYYCQQHYSTPWTFGGGTKVEI---  106
usage_00230.pdb        61  RFTGSGSGTDFTLTITNVQSEDLADYFCQQYNSYPLTFGTGTKLDL---  106
                           RFtGSGs TDfT TI  V  eDlA Y C q    P TFG GTK e    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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