################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:17 2021 # Report_file: c_0206_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00020.pdb # 4: usage_00055.pdb # 5: usage_00056.pdb # # Length: 121 # Identity: 44/121 ( 36.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/121 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/121 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ---LQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNY 57 usage_00006.pdb 1 ---LQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNY 57 usage_00020.pdb 1 -AQLQQSGAELMKPGASVKISCKATGYTFSNYWIDWIKQRPGHGLEWIGEILPGSGSTNY 59 usage_00055.pdb 1 ----QQSGAELVKPGASVKLSCKASGYTFTNYFIYWVKQRPGQGLEWIGEINPRNGDTDF 56 usage_00056.pdb 1 QVQLQQSGPELVKPGALVKISCKASGYTFTNYDINWVKQRPGQGLEWIGWIYPGDGSTMY 60 QQSG ELvKPGAsVKiSCK sGY F WvKQRPGqG EWIG I Pg G T y usage_00005.pdb 58 NGKFKGKATLTADKSSSTAYMQLSSLTSVDS-AVYFCARSGLL-RYAMDYWG-QGTSVTV 114 usage_00006.pdb 58 NGKFKGKATLTADKSSSTAYMQLSSLTSVDS-AVYFCARSGLL-RYAMDYWG-QGTSVTV 114 usage_00020.pdb 60 NEKFRGKATFTADTSSNTAYMQLSSLTSEDS-AVYYCTRRGYW-AYDFDYWG-QGTTLTV 116 usage_00055.pdb 57 NEKFESRATLTVDKSSSTAYMQLSSLTSEDS-AIYYCTRSPYG-NNYGFTYWGQGTLVTV 114 usage_00056.pdb 61 NE-KFKGKATLTADKSSSTAYMQLSSLTSENSSVYFCARLDGNYGGWFAYWG-QGTSVTV 118 N f at t d sSstaymqlsSlts ds avY C R ywg QGT vTV usage_00005.pdb 115 S 115 usage_00006.pdb - usage_00020.pdb 117 S 117 usage_00055.pdb 115 S 115 usage_00056.pdb 119 S 119 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################