################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:50 2021 # Report_file: c_1033_79.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00219.pdb # 2: usage_00223.pdb # 3: usage_00402.pdb # 4: usage_00905.pdb # # Length: 64 # Identity: 4/ 64 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 64 ( 28.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 64 ( 46.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00219.pdb 1 YDIFTVGIGVNGDPGAT----PLEAEKFMQSISSKTENYCNV----D----DTNCIYDEL 48 usage_00223.pdb 1 -DIFTVGIGVNGDPGAT----PLEAEKFMQSISSKTENYTNV----DDTNKIYDELNKYF 51 usage_00402.pdb 1 -DVFTVGIGINGDPGTD----EATATSFMQSISSKPENYTNV----TDTTKILEQLNRYF 51 usage_00905.pdb 1 --DLIVVSI--------GADSARDQIPLLQAIA----PTILVDYSDQTWQSLAQQLGLAT 46 ftVgig a fmQsIs ny nV l usage_00219.pdb ---- usage_00223.pdb 52 KTIV 55 usage_00402.pdb 52 H--- 52 usage_00905.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################