################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:54 2021 # Report_file: c_1417_139.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00157.pdb # 2: usage_00731.pdb # 3: usage_00739.pdb # 4: usage_01111.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 74 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 74 ( 68.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00157.pdb 1 ----TEDAVR----------------RYLTRKPMTTKDLLKKFQT---KKTGLSSE-QTV 36 usage_00731.pdb 1 PQDKWIREIGYH-----------CKD--------YVKWYLKKHPDF----------N--- 28 usage_00739.pdb 1 ----TEDAVR----------------RYLTRKPMTTKDLLKKFQT---KKTGLSSE-QTV 36 usage_01111.pdb 1 -AIRSVLQAL--LHEKIPIKDMLTIL--------ETITDIAPLV--QN------DVN--- 38 tk lkk usage_00157.pdb 37 NVLAQILKRLN--- 47 usage_00731.pdb 29 ---KNVAAHVINVR 39 usage_00739.pdb 37 NVLAQILKRL---- 46 usage_01111.pdb 39 ---ILTEQVRARL- 48 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################