################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:06 2021 # Report_file: c_1283_42.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00064.pdb # 2: usage_00089.pdb # 3: usage_00094.pdb # 4: usage_00097.pdb # 5: usage_00103.pdb # 6: usage_00106.pdb # 7: usage_00133.pdb # 8: usage_00286.pdb # 9: usage_00348.pdb # 10: usage_00382.pdb # 11: usage_00408.pdb # 12: usage_00409.pdb # 13: usage_00722.pdb # 14: usage_00785.pdb # 15: usage_00786.pdb # 16: usage_00790.pdb # 17: usage_01289.pdb # # Length: 75 # Identity: 2/ 75 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 75 ( 16.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 75 ( 52.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00089.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00094.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00097.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00103.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00106.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00133.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00286.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00348.pdb 1 K-------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 39 usage_00382.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 usage_00408.pdb 1 --------KRLRLAGDLFASLFRVAFKAFVKDLTYQL----EKSKVRGRKLALKALV--R 46 usage_00409.pdb 1 --------KRLRLAGDLFASLFRVAFKAFVKDLTYQL----EKSKVRGRKLALKALV--R 46 usage_00722.pdb 1 K-------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 39 usage_00785.pdb 1 -VEMNCYE----DASMFKAYIKKFMKNVIDHMEKNNRDKAD------------------V 37 usage_00786.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-EAHDFNMKLAIN 46 usage_00790.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-EAHDFNMKLAIN 46 usage_01289.pdb 1 --------KRLDLAGPLLAQLFKTLFKKLTKDIFRYM----QRTV-E-------LAI--N 38 lAg l A lf fk kd usage_00064.pdb 39 AKTITSGLKYALATG 53 usage_00089.pdb 39 AKTITSGLKYALATG 53 usage_00094.pdb 39 AKTITSGLKYALATG 53 usage_00097.pdb 39 AKTITSGLKYALATG 53 usage_00103.pdb 39 AKTITSGLKYALATG 53 usage_00106.pdb 39 AKTITSGLKYALA-- 51 usage_00133.pdb 39 AKTITSGLKYALATG 53 usage_00286.pdb 39 AKTITSGLKYALA-- 51 usage_00348.pdb 40 AKTITSGLKYALA-- 52 usage_00382.pdb 39 AKTITSGLKYALATG 53 usage_00408.pdb 47 PDIVTERIRHALATG 61 usage_00409.pdb 47 PDIVTERIRHALATG 61 usage_00722.pdb 40 AKTITSGLKYALATG 54 usage_00785.pdb 38 DAFKKKIQGWVVS-- 50 usage_00786.pdb 47 AKTITSGLKYALATG 61 usage_00790.pdb 47 AKTITSGLKYALATG 61 usage_01289.pdb 39 AKTITSGLKY----- 48 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################