################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:01 2021 # Report_file: c_0699_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00870.pdb # 2: usage_00871.pdb # 3: usage_00872.pdb # 4: usage_00873.pdb # 5: usage_00874.pdb # 6: usage_00875.pdb # 7: usage_00876.pdb # 8: usage_00877.pdb # 9: usage_01335.pdb # 10: usage_01336.pdb # 11: usage_01337.pdb # 12: usage_01338.pdb # # Length: 87 # Identity: 76/ 87 ( 87.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 87 ( 87.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 87 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00870.pdb 1 --RVVAFLQKHGSE-KVQKV----FAPNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 53 usage_00871.pdb 1 --RVVAFLQKHGSE-KVQKV----FAPNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 53 usage_00872.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_00873.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_00874.pdb 1 YLRVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 57 usage_00875.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_00876.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_00877.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_01335.pdb 1 YLRVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 57 usage_01336.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 usage_01337.pdb 1 YLRVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 57 usage_01338.pdb 1 --RVVAFLQKHGSEK-VQKVMFAP--MNAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD 55 RVVAFLQKHGSE VQKV NAGDGPHYGANVKFEEGLGTYKVRFEIAAPSHD usage_00870.pdb 54 EYSLHIDEQTGVSGRFWSEPLVAEWDD 80 usage_00871.pdb 54 EYSLHIDEQTGVSGRFWSEPLVAEWDD 80 usage_00872.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_00873.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_00874.pdb 58 EYSLHIDEQTGVSGRFWSEPLVAEWDD 84 usage_00875.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_00876.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_00877.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_01335.pdb 58 EYSLHIDEQTGVSGRFWSEPLVAEWDD 84 usage_01336.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 usage_01337.pdb 58 EYSLHIDEQTGVSGRFWSEPLVAEWDD 84 usage_01338.pdb 56 EYSLHIDEQTGVSGRFWSEPLVAEWDD 82 EYSLHIDEQTGVSGRFWSEPLVAEWDD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################