################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:28 2021 # Report_file: c_0691_65.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00012.pdb # 2: usage_00242.pdb # 3: usage_00563.pdb # 4: usage_00642.pdb # # Length: 77 # Identity: 2/ 77 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 77 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 77 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GTEL---TGTWT-MEGNKLVGKFKRVDNGKELIAVREISG--NELIQTYTYEG----VEA 50 usage_00242.pdb 1 -------KTVVAPSTEGGLNLTSTF------------LRKNQCETKIMVLQPAGAPGHYT 41 usage_00563.pdb 1 ------CKTVVAPSTEGGLNLTSTF------------LRKNQAETKIMVLQPAGAPGHYT 42 usage_00642.pdb 1 ----SMAKSVVAPATDGGLNLTSTF------------LRKNQCETRTMLLQPAGSLGSYS 44 k vva t ggLnltstf lrk Et m lqpa y usage_00012.pdb 51 KRI--------FKK--- 56 usage_00242.pdb 42 YSSSG-SI--HS--VS- 52 usage_00563.pdb 43 YSSPHSGS-IHS--VSV 56 usage_00642.pdb 45 YRSPH-WGSTYS--VS- 57 y s s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################