################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:32 2021 # Report_file: c_0793_8.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00033.pdb # 2: usage_00078.pdb # 3: usage_00133.pdb # 4: usage_00134.pdb # 5: usage_00189.pdb # 6: usage_00190.pdb # 7: usage_00285.pdb # 8: usage_00286.pdb # 9: usage_00330.pdb # 10: usage_00355.pdb # 11: usage_00451.pdb # 12: usage_00452.pdb # 13: usage_00476.pdb # 14: usage_00477.pdb # 15: usage_00478.pdb # # Length: 69 # Identity: 7/ 69 ( 10.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 69 ( 17.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 69 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPA 60 usage_00078.pdb 1 ---GFVVALIQGDGIGPEVVSKSKTILARLNEKFSLPIEYIEVEAGDTTKNKFGDALPKD 57 usage_00133.pdb 1 --KTYKVAVLAGDGIGPLV-KEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDE 57 usage_00134.pdb 1 ---TYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDE 57 usage_00189.pdb 1 --SSYQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEA 58 usage_00190.pdb 1 ----YQIAVLAGDGIGPEVMAEARKVLAAVEKRFDLSIEYSEYDVGGAAIDNHGCPLPEA 56 usage_00285.pdb 1 --SSYQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLP-- 56 usage_00286.pdb 1 --SSYQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEA 58 usage_00330.pdb 1 ----MKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEP 56 usage_00355.pdb 1 ---AYRICLIEGDGIGHEVIPAARRVLEATG----LPLEFVEAEAGWETFERRGTSVPEE 53 usage_00451.pdb 1 ---MKKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAA 57 usage_00452.pdb 1 ---SMKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEP 57 usage_00476.pdb 1 --SSYQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEA 58 usage_00477.pdb 1 --SSYQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEA 58 usage_00478.pdb 1 ----YQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEA 56 a GDGIGp v a L G g usage_00033.pdb 61 TVEGCEQA- 68 usage_00078.pdb 58 SLRVIEKA- 65 usage_00133.pdb 58 TLKLCEQS- 65 usage_00134.pdb 58 TLKLCEQS- 65 usage_00189.pdb 59 TLKGCEAA- 66 usage_00190.pdb 57 TLKGCEAA- 64 usage_00285.pdb --------- usage_00286.pdb 59 TLKGCEAA- 66 usage_00330.pdb 57 TRKGVEEAE 65 usage_00355.pdb 54 TVEKILS-- 60 usage_00451.pdb 58 SLQLAMAA- 65 usage_00452.pdb 58 TRKGVE--- 63 usage_00476.pdb 59 TLKGCEAA- 66 usage_00477.pdb 59 TLKGCEAA- 66 usage_00478.pdb 57 TLKGCEAA- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################