################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:24 2021 # Report_file: c_1209_48.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00756.pdb # 2: usage_00901.pdb # 3: usage_00911.pdb # 4: usage_00992.pdb # 5: usage_01098.pdb # 6: usage_01624.pdb # # Length: 55 # Identity: 41/ 55 ( 74.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 55 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 55 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00756.pdb 1 --PITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF-- 51 usage_00901.pdb 1 --PITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF-- 51 usage_00911.pdb 1 -QPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF-- 52 usage_00992.pdb 1 Q-PITP---------PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ--- 42 usage_01098.pdb 1 Q-PITP---------PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF-- 43 usage_01624.pdb 1 Q-PITP---------PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 45 PITP PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################