################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:03 2021 # Report_file: c_1138_63.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00290.pdb # 2: usage_00291.pdb # 3: usage_00534.pdb # 4: usage_00535.pdb # # Length: 140 # Identity: 40/140 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/140 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/140 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00290.pdb 1 L---------WVE----GVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGII 47 usage_00291.pdb 1 L---------WVE----GVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGII 47 usage_00534.pdb 1 -TMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVI 59 usage_00535.pdb 1 -TMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVI 59 G E F LV V LY L SG I usage_00290.pdb 48 GTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTIN----RRRRD-YPNRAVAL 102 usage_00291.pdb 48 GTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTIN----RRRRD-YPNRAVAL 102 usage_00534.pdb 60 GIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGG-A-NFPYKATFW 117 usage_00535.pdb 60 GIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGG-A-NFPYKATFW 117 G GHHY G P W LG VFSALE P L A P A usage_00290.pdb 103 WAMGTTVMAFLGAGVWGFM- 121 usage_00291.pdb 103 WAMGTTVMAFLGAGVWGFMH 122 usage_00534.pdb 118 FLISTAIWNLVGAGVFGFL- 136 usage_00535.pdb 118 FLISTAIWNLVGAGVFGFL- 136 T GAGV GF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################