################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:27 2021 # Report_file: c_1488_96.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00806.pdb # 2: usage_01572.pdb # 3: usage_01573.pdb # 4: usage_01907.pdb # 5: usage_03407.pdb # 6: usage_03728.pdb # 7: usage_03729.pdb # 8: usage_03730.pdb # 9: usage_05034.pdb # 10: usage_07603.pdb # 11: usage_07698.pdb # # Length: 33 # Identity: 1/ 33 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 33 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 33 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00806.pdb 1 ----SPEWYS---KGFGHLCAAEVARIRNS--- 23 usage_01572.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_01573.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_01907.pdb 1 DPEV------VASELGYVFQAITLTRQRL---- 23 usage_03407.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_03728.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_03729.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_03730.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 usage_05034.pdb 1 ----D-----LTR-NDLDTLLS-EIKLRLLDLE 22 usage_07603.pdb 1 ----------VASELGYVFQAITLTRQRLA--- 20 usage_07698.pdb 1 DPEV------VASELGYVFQAITLTRQRLA--- 24 a r Rl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################