################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:32 2021 # Report_file: c_0571_57.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00204.pdb # 2: usage_00303.pdb # 3: usage_00304.pdb # 4: usage_00305.pdb # 5: usage_00332.pdb # 6: usage_00388.pdb # 7: usage_00511.pdb # # Length: 85 # Identity: 7/ 85 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 85 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 85 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 ---KNTAIKW-------NDYRINIVDTPGH-A--DFGGEVERVMSMVDSVLLVVDAFDGP 47 usage_00303.pdb 1 ---SVMQFPY-------RDRVVNLLDTPGH-Q--DFSEDTYRVLTAVDSALVVIDAAKGV 47 usage_00304.pdb 1 ---SVMQFPY-------RDRVVNLLDTPGH-Q--DFSEDTYRVLTAVDSALVVIDAAKGV 47 usage_00305.pdb 1 ---SVMQFPY-------RDRVVNLLDTPGH-Q--DFSEDTYRVLTAVDSALVVIDAAKGV 47 usage_00332.pdb 1 ----LAKNTA--------DYRINIVDTPGHADFG---GEVERVMSMVDSVLLVVDAFDGP 45 usage_00388.pdb 1 ----------LCTDLESKSRMINFLDAPGHVN--FM-DETAVALAASDLVLIVIDVVEGV 47 usage_00511.pdb 1 IDVAYRYFST-------AKRKFIIADTPGHEQ--YT--RNATGASTCDLAIILVDARYGV 49 n DtPGH D l v Da G usage_00204.pdb 48 MPQTRFVTKKAFAYGL-KPIVVI-- 69 usage_00303.pdb 48 EAQTRKLMDVCRMRAT-PVMTFVNK 71 usage_00304.pdb 48 EAQTRKLMDVCRMRAT-PVMTFVNK 71 usage_00305.pdb 48 EAQTRKLMDVCRMRAT-PVMTFVNK 71 usage_00332.pdb 46 MPQTRFVTKKAFAYGL-KPIVVI-- 67 usage_00388.pdb 48 TFVVEQLIKQSIKNNV-AMCFVI-- 69 usage_00511.pdb 50 QTQTRRHSYIASLLGIKHIVVAI-- 72 qtr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################