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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:12:05 2021
# Report_file: c_0547_4.html
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#====================================
# Aligned_structures: 5
#   1: usage_00078.pdb
#   2: usage_00197.pdb
#   3: usage_00228.pdb
#   4: usage_00229.pdb
#   5: usage_00230.pdb
#
# Length:        138
# Identity:       40/138 ( 29.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    132/138 ( 95.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/138 (  4.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00078.pdb         1  DPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSA   60
usage_00197.pdb         1  -PHEWVAARNVVTANKAALADYFYESMLADPNAAFFLSDQLVKTKLHASMQDWLESVYAA   59
usage_00228.pdb         1  DPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSA   60
usage_00229.pdb         1  -PPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSA   59
usage_00230.pdb         1  -PPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSA   59
                            PpirakAaeiavAhahyLsieFYrivriDPhAeeFLSneqVerqLksaMerWiinVlsA

usage_00078.pdb        61  Q--VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY-SAAEKLQV  117
usage_00197.pdb        60  APT-EEYERTVAFQRKVGEVHARIDIPVHLVTRGASALIRRICELLDRDASLSAAQAAAT  118
usage_00228.pdb        61  Q--VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY-SAAEKLQV  117
usage_00229.pdb        60  Q--VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY-SAAEKLQV  116
usage_00230.pdb        60  Q--VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY-SAAEKLQV  116
                           q   ddvERliqiQhtVaEVHARIgIPVeiVemGfrvLkkilypvifssdy SAAeklqv

usage_00078.pdb       118  YHFSINSIDIAMEVMTRA  135
usage_00197.pdb       119  CRYVADVTMTAVEMMSH-  135
usage_00228.pdb       118  YHFSINSIDIAMEVMTRA  135
usage_00229.pdb       117  YHFSINSIDIAMEVMTRA  134
usage_00230.pdb       117  YHFSINSIDIAMEVMTRA  134
                           yhfsinsidiAmEvMtr 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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