################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:17 2021 # Report_file: c_0809_12.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00018.pdb # 4: usage_00053.pdb # 5: usage_00175.pdb # 6: usage_00176.pdb # 7: usage_00178.pdb # 8: usage_00183.pdb # 9: usage_00345.pdb # 10: usage_00386.pdb # 11: usage_00678.pdb # 12: usage_00679.pdb # 13: usage_00680.pdb # # Length: 76 # Identity: 12/ 76 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 76 ( 27.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 76 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00015.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00018.pdb 1 GRKDAERQLLSFGN-PRGTFLIRESETTKGAYSLSIRDW-DD-MKGDHVKHYKIRKLDN- 56 usage_00053.pdb 1 SRDKAEKLLLD--TGKEGAFMVRDSR-TPGTYTVSVFTKAII-SENPCIKHYHIKETND- 55 usage_00175.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00176.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00178.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00183.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDG- 56 usage_00345.pdb 1 -RKDAERQLLSFGN-PRGTFLIRESETTKGAYSLSIRDW-DD-MKGDHVKHYKIRKLDN- 55 usage_00386.pdb 1 SREEAHKLLGEPQV-SIGTFLMRDSS-RPGEYSLTVREA--DEGN--AVCHYLIERGEPK 54 usage_00678.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRGFY-- 55 usage_00679.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 usage_00680.pdb 1 SRKDAERQLLAPGN-MLGSFMIRDSETTKGSYSLSVRDY-DP-RQGDTVKHYKIRTLDN- 56 R Ae Ll G F R S t G Ysls r vkHY I usage_00014.pdb 57 --G-GFY----I---- 61 usage_00015.pdb 57 --G-GFY--------- 60 usage_00018.pdb 57 --G-GYY----I---- 61 usage_00053.pdb 56 --SPKRY----Y-V-- 62 usage_00175.pdb 57 --G-GFY----I---- 61 usage_00176.pdb 57 --G-GFY----I---- 61 usage_00178.pdb 57 --G-GFY----I---- 61 usage_00183.pdb 57 --F-YI---------- 59 usage_00345.pdb 56 --G-GYY----ITT-- 62 usage_00386.pdb 55 EDG-TAAAGVKI-A-- 66 usage_00678.pdb 56 --------------IS 57 usage_00679.pdb 57 --G-GFY----I---- 61 usage_00680.pdb 57 --G-GFY----I---- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################