################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:10 2021 # Report_file: c_0064_6.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00011.pdb # 2: usage_00022.pdb # 3: usage_00042.pdb # 4: usage_00058.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00068.pdb # 10: usage_00070.pdb # 11: usage_00090.pdb # 12: usage_00091.pdb # 13: usage_00092.pdb # 14: usage_00093.pdb # # Length: 163 # Identity: 10/163 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/163 ( 16.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/163 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --PVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNR 58 usage_00022.pdb 1 --PVIAAVHGWCIGAGLELIAGADLRLCSQDARFSLPEVKLGITADLGGLQRLPHLIG-R 57 usage_00042.pdb 1 --LLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILPAQ-IAPFVVRRIG-L 56 usage_00058.pdb 1 --PTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIG-M 57 usage_00064.pdb 1 -KPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVG-K 58 usage_00065.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00066.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00067.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00068.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00070.pdb 1 SKPVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIG-H 59 usage_00090.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00091.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG-K 57 usage_00092.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPQIKLGVLPGMGGSQRLTRAIG-K 57 usage_00093.pdb 1 --PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPQIKLGVLPGMGGSQRLTRAIG-K 57 p Aa G ggG L D A f g rl iG usage_00011.pdb 59 SLVNELTFTARKMMADEALDSGLVSRVFPDKD----VML-NAAFALAADISSKSPVAVQG 113 usage_00022.pdb 58 GRTAHLALTGEAIDAATAERWGLVTEVLPDQD----ALF-ARAEALAEHLAALPAKALEG 112 usage_00042.pdb 57 TQARRLALTAARFDGREALRLGLVHFCEAD-A----DALEQRLEETLEQLRRCAPNANAA 111 usage_00058.pdb 58 SLAKELIFSARVLDGKEAKAVGLISHVLEQ-NQEGDAAY-RKALDLAREFLPQGPVAMRV 115 usage_00064.pdb 59 AKAMDLCLTGRSLTAEEAERVGLVSRIVPA-A----DLL-DEALAVAQRIARMSRPAGRA 112 usage_00065.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00066.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00067.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00068.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00070.pdb 60 SRAMDMILTGRAVQADEALAIGLANRVVPN-G----QAR-QAAEELAAQLAALPQQCLRS 113 usage_00090.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00091.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00092.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 usage_00093.pdb 58 AKAMDLILTGRTMDAAEAERSGLVSRVVPA-D----DLL-TEARATATTISQMSASAARM 111 l t eA GL a a a usage_00011.pdb 114 SKINLIYSRDHSVDESLDYMATWNMSMLQTQ------------ 144 usage_00022.pdb 113 TKRALSD-G-LPHAESLAAAVRWNAEHT-----VEALQAG--- 145 usage_00042.pdb 112 TKALLLASESGELGALLDDAARQFAEAVGGAEGSEGTLAFVQ- 153 usage_00058.pdb 116 AKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEK 158 usage_00064.pdb 113 VKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEK 155 usage_00065.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 154 usage_00066.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIE- 153 usage_00067.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 154 usage_00068.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 154 usage_00070.pdb 114 DRLSALQQWGLPESAALDLEFASISRVA--AEALEGAG----- 149 usage_00090.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIE- 153 usage_00091.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSA---------------- 138 usage_00092.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 154 usage_00093.pdb 112 AKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 154 k l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################