################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:12 2021 # Report_file: c_1130_2.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00015.pdb # 7: usage_00019.pdb # 8: usage_00020.pdb # 9: usage_00021.pdb # 10: usage_00022.pdb # 11: usage_00023.pdb # 12: usage_00026.pdb # 13: usage_00027.pdb # 14: usage_00057.pdb # 15: usage_00059.pdb # 16: usage_00060.pdb # 17: usage_00072.pdb # 18: usage_00100.pdb # 19: usage_00101.pdb # # Length: 93 # Identity: 8/ 93 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 93 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 93 ( 36.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -DYYQTLGLAR-GASDEEIKRAYRRQALRYHPDKNK----E-PG--AEEKFKEIAEAYDV 51 usage_00002.pdb 1 -DYYQTLGLAR-GASDEEIKRAYRRQALRYHPDKNK----E-PG--AEEKFKEIAEAYDV 51 usage_00003.pdb 1 -GYYDVLGVKP-DASDNELKKAYRKMALKFHPDKNP-------D--GAEQFKQISQAYEV 49 usage_00012.pdb 1 -DYYTLLGCDE-LSSVEQILAEFKVRALECHPDKHPE---N-PK--AVETFQKLQKAKEI 52 usage_00013.pdb 1 -DPYRVLGVSR-TASQADIKKAYKKLAREWHPDKNK----D-PG--AEDRFIQISKAYEI 51 usage_00015.pdb 1 -NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEK-LL--AEERFRVIATAYET 56 usage_00019.pdb 1 -DYYAILGVPR-NATQEEIKRAYKRLARQYHPDVNK----S-PE--AEEKFKEINEAYAV 51 usage_00020.pdb 1 -DYYAILGVPR-NATQEEIKRAYKRLARQYHPDVNK----S-PE--AEEKFKEINEAYAV 51 usage_00021.pdb 1 -DYYAILGVPR-NATQEEIKRAYKRLARQYHPDVNK----S-PE--AEEKFKEINEAYAV 51 usage_00022.pdb 1 -DYYAILGVPR-NATQEEIKRAYKRLARQYHPDVNK----S-PE--AEEKFKEINEAYAV 51 usage_00023.pdb 1 -NYYEVLGVQA-SASPEDIKKAYRKLALRWHPDKNPD---NKEE--AEKKFKLVSEAYEV 53 usage_00026.pdb 1 -DYYAIMGVKP-TDDLKTIKTAYRRLARKYHPDVSK----E-PD--AEARFKEVAEAWEV 51 usage_00027.pdb 1 -DYYAIMGVKP-TDDLKTIKTAYRRLARKYHPDVSK----E-PD--AEARFKEVAEAWEV 51 usage_00057.pdb 1 -DYYAIMGVKP-TDDLKTIKTAYRRLARKYHPDVSK----E-PD--AEARFKEVAEAWEV 51 usage_00059.pdb 1 -TYYDVLGVKP-NATQEELKKAYRKLALKYHPDKNP-------N--EGEKFKQISQAYEV 49 usage_00060.pdb 1 -DYYEILGVSK-TAEEREIRKAYKRLAMKYHPDRNQG---D-KE--AEAKFKEIKEAYEV 52 usage_00072.pdb 1 -NFYSLLGVSK-TASSREIRQAFKKLALKLHPDKNPN---N-PN--AHGDFLKINRAYEV 52 usage_00100.pdb 1 TALYDLLGVPS-TATQAQIKAAYYRQCFLYHPDRNSG---S-AE--AAERFTRISQAYVV 53 usage_00101.pdb 1 TKLYDLLGVSP-SANEQELKKGYRKAALKYHPDKP---------TGDTEKFKEISEAFEI 50 Y g a HPD F A usage_00001.pdb 52 LSDPRKREIFDRYGEEVKEFLAKAKEDFLKKWE 84 usage_00002.pdb 52 LSDPRKREIFDRYGEEVKEFLAKAKEDFLKKWE 84 usage_00003.pdb 50 LSDEKKRQIYDQGG------------------- 63 usage_00012.pdb 53 LTNEESRARYDHWRRSQ---------------- 69 usage_00013.pdb 52 LSNEEKRTNYDHYG------------------- 65 usage_00015.pdb 57 LKDDEAKTNYDYYLD------------------ 71 usage_00019.pdb 52 LSDPEKRRIYDTY-------------------- 64 usage_00020.pdb 52 LSDPEKRRIYDTY-------------------- 64 usage_00021.pdb 52 LSDPEKRRIYDTY-------------------- 64 usage_00022.pdb 52 LSDPEKRRIYDTY-------------------- 64 usage_00023.pdb 54 LSDSKKRSLYDRAG------------------- 67 usage_00026.pdb 52 LSDEQRRAEYDQMWQHR---------------- 68 usage_00027.pdb 52 LSDEQRRAEYDQMWQH----------------- 67 usage_00057.pdb 52 LSDEQRRAEYDQMW------------------- 65 usage_00059.pdb 50 LSDAKKRELYDKG-------------------- 62 usage_00060.pdb 53 LTDSQKRAAYDQY-------------------- 65 usage_00072.pdb 53 LKDEDLRKKYDK--------------------- 64 usage_00100.pdb 54 LGSATLRRKYDRG-------------------- 66 usage_00101.pdb 51 LNDPQKREIYDQYG------------------- 64 L r D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################