################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:25 2021 # Report_file: c_0875_39.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00104.pdb # 2: usage_00150.pdb # 3: usage_00240.pdb # 4: usage_00255.pdb # 5: usage_00326.pdb # 6: usage_00361.pdb # 7: usage_00404.pdb # 8: usage_00406.pdb # 9: usage_00503.pdb # 10: usage_00760.pdb # 11: usage_00900.pdb # 12: usage_00901.pdb # 13: usage_00999.pdb # 14: usage_01000.pdb # # Length: 159 # Identity: 36/159 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/159 ( 22.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 69/159 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 -----KHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 55 usage_00150.pdb 1 -------------------------TVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 35 usage_00240.pdb 1 -AERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 59 usage_00255.pdb 1 DAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00326.pdb 1 DAERLKHLIVTPSGCGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00361.pdb 1 DAERLKHLIVTPSGCGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00404.pdb 1 DAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00406.pdb 1 DAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00503.pdb 1 --------------AGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 46 usage_00760.pdb 1 DAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 usage_00900.pdb 1 SPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMR 60 usage_00901.pdb 1 SPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMR 60 usage_00999.pdb 1 -----KHLIVTPSGCGEENMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 55 usage_01000.pdb 1 DAERLKHLIVTPSGCGEENMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQ 60 T A YLD TEQW E A LI KGY usage_00104.pdb 56 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 112 usage_00150.pdb 36 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPD 95 usage_00240.pdb 60 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 116 usage_00255.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 usage_00326.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 usage_00361.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEK---- 116 usage_00404.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 usage_00406.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 usage_00503.pdb 47 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPD 106 usage_00760.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 usage_00900.pdb 61 IQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQ----- 115 usage_00901.pdb 61 IQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQ----- 115 usage_00999.pdb 56 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 112 usage_01000.pdb 61 QLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQ--- 117 FR AA R STWLTA V KV SLA L WL usage_00104.pdb --------------------------------------- usage_00150.pdb 96 GVFQEDAPVIHQEMIG----------------------- 111 usage_00240.pdb --------------------------------------- usage_00255.pdb --------------------------------------- usage_00326.pdb --------------------------------------- usage_00361.pdb --------------------------------------- usage_00404.pdb --------------------------------------- usage_00406.pdb --------------------------------------- usage_00503.pdb 107 GVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEA 145 usage_00760.pdb --------------------------------------- usage_00900.pdb --------------------------------------- usage_00901.pdb --------------------------------------- usage_00999.pdb --------------------------------------- usage_01000.pdb --------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################