################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:45 2021 # Report_file: c_1314_14.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00001.pdb # 2: usage_00024.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00041.pdb # 7: usage_00044.pdb # 8: usage_00062.pdb # 9: usage_00079.pdb # 10: usage_00080.pdb # 11: usage_00087.pdb # 12: usage_00088.pdb # 13: usage_00089.pdb # 14: usage_00090.pdb # 15: usage_00091.pdb # 16: usage_00092.pdb # 17: usage_00129.pdb # 18: usage_00130.pdb # 19: usage_00222.pdb # 20: usage_00243.pdb # 21: usage_00381.pdb # 22: usage_00410.pdb # 23: usage_00418.pdb # 24: usage_00435.pdb # 25: usage_00436.pdb # # Length: 46 # Identity: 10/ 46 ( 21.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 46 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 46 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PRQKEFYVITILIPAIAAASYLSMFFGFGLTEVSLANGRVVDV-Y 44 usage_00024.pdb 1 DPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIY-- 44 usage_00038.pdb 1 DPDAKKFYAITTLVAAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00039.pdb 1 DPDAKKFYAITTLVAAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00040.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00041.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00044.pdb 1 DPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00062.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIY-- 43 usage_00079.pdb 1 -PDAKKFYAIATLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00080.pdb 1 DPDAKKFYAIATLVAAIAFTMYLSMLLGYGLTMVPFGGEQNPIY-- 44 usage_00087.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00088.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00089.pdb 1 DPDAKKFYAISTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00090.pdb 1 DPDAKKFYAISTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00091.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00092.pdb 1 -PDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 45 usage_00129.pdb 1 DPDAKKFYAITTLVPPIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00130.pdb 1 DPDAKKFYAITTLVPPIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00222.pdb 1 DPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIY-- 44 usage_00243.pdb 1 DPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIY-- 44 usage_00381.pdb 1 DRKMQEFYIITTFITTIAAAMYFAMATGFGVTEVVVGDEALTIY-- 44 usage_00410.pdb 1 DPDAKKFYAITTLVPAIAFTAYLSMLLGYGLTMVPFGGEQNPIYWA 46 usage_00418.pdb 1 --DAKKFYAITTLAPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWA 44 usage_00435.pdb 1 -KEAREYYSITILVPGIASAAYLSMFFGIGLTEVQVGSEMLDIY-- 43 usage_00436.pdb 1 -KEAREYYSITILVPGIASAAYLSMFFGIGLTEVQVGSEMLDIY-- 43 Y I l IA YlsM G GlT V g e iy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################