################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:53 2021 # Report_file: c_1379_28.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00288.pdb # 2: usage_00289.pdb # 3: usage_00290.pdb # 4: usage_00291.pdb # 5: usage_00304.pdb # 6: usage_00385.pdb # 7: usage_00725.pdb # 8: usage_00764.pdb # 9: usage_00766.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 49 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 49 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETS 46 usage_00289.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 45 usage_00290.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 45 usage_00291.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 45 usage_00304.pdb 1 ----GGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 44 usage_00385.pdb 1 ---RGKKADELERIRLRPGGKKKYRLKHIVWAANKLDRFGLAESLLES- 45 usage_00725.pdb 1 EKAFFELVDRYTT----DRHDLD-LQFLVKQVYEYSRSHPNPEAWLES- 43 usage_00764.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 45 usage_00766.pdb 1 ---SGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLET- 45 g D e pggkk lkhivwa l rf lLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################