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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:06:46 2021
# Report_file: c_0791_90.html
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#====================================
# Aligned_structures: 4
#   1: usage_00115.pdb
#   2: usage_00116.pdb
#   3: usage_00117.pdb
#   4: usage_01018.pdb
#
# Length:         72
# Identity:        5/ 72 (  6.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     38/ 72 ( 52.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           34/ 72 ( 47.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00115.pdb         1  DKYVLITGAGKGSIGAEVLQGLLQGG----AKVVVTTS--RF-SKQVTDYY-QSIYAKYG   52
usage_00116.pdb         1  DKYVLITGAGKGSIGAEVLQGLLQGG----AKVVVTTS--RF-SKQVTDYY-QSIYAKYG   52
usage_00117.pdb         1  DKYVLITGAGKGSIGAEVLQGLLQGG----AKVVVTTS--RF-SKQVTDYY-QSIYAKYG   52
usage_01018.pdb         1  ---VAVVGDQ--------IDVDVAAGKAIGAETVLVL-TGVTTRENL--DQIERHG----   42
                              VlitGag        lqgllqgG    AkvVvtt   rf skqv  yy qsiy    

usage_00115.pdb        53  AKGS-TLIV---   60
usage_00116.pdb        53  AKGS-TLIV---   60
usage_00117.pdb        53  AKGS-TLIV---   60
usage_01018.pdb        43  ----LKPDYVFN   50
                                tliv   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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