################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:20 2021 # Report_file: c_0464_43.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00075.pdb # 4: usage_00117.pdb # 5: usage_00286.pdb # 6: usage_00525.pdb # 7: usage_00526.pdb # 8: usage_00527.pdb # 9: usage_00528.pdb # 10: usage_00721.pdb # 11: usage_01213.pdb # # Length: 115 # Identity: 17/115 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/115 ( 25.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/115 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -GFAPNILENSEALELVKEAIDKAGYT--EKIVIGMDVAASEFYR-D-GKYDLDFKSP-T 54 usage_00013.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKVKIGLDCASSEFFK-D-GKYDLDFKNPNS 55 usage_00075.pdb 1 GGFAPPLKTSREALDLLTESVKKAGYE--DEVVFALDAAASEFYK-D-GYYYVEG----- 51 usage_00117.pdb 1 -GFAPPIKDINEPLPILMEAIEEAGHR--GKFAICMDCAASETYDEKKQQYNLTFKSP-E 56 usage_00286.pdb 1 -GFAPNILENSEALELVKEAIDKAGYT--EKIVIGMDVAASEFYR-D-GKYDLDFKSP-T 54 usage_00525.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKIKIGLDCASSEFFK-D-GKYDLDFKNPNS 55 usage_00526.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKIKIGLDCASSEFFK-D-GKYDLDFKNPNS 55 usage_00527.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKIKIGLDCASSEFFK-D-GKYDLDFKNN-S 54 usage_00528.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKIKIGLDCASSEFFK-D-GKYDLDFKNPNS 55 usage_00721.pdb 1 -GVAPNIQTAEEALDLIVDAIKAAGHD--GKVKIGLDCASSEFFK-D-GKYDLDFKNPNS 55 usage_01213.pdb 1 GGFAPDLPNNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQ-N-GRYDFEN----- 53 G AP eal l ai Ag D A SE g Y usage_00012.pdb 55 DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQ--IVG- 106 usage_00013.pdb 56 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 108 usage_00075.pdb 52 ---KKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQ--IVGD 101 usage_00117.pdb 57 P--TWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKT-QIVG 108 usage_00286.pdb 55 DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQ--IVG- 106 usage_00525.pdb 56 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 108 usage_00526.pdb 56 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 108 usage_00527.pdb 55 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 107 usage_00528.pdb 56 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 108 usage_00721.pdb 56 DKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQ--IVAD 108 usage_01213.pdb 54 ---NQLTSEE-IDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGD 104 T y YP vSIEDp D v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################