################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:52 2021 # Report_file: c_0276_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00009.pdb # 3: usage_00017.pdb # 4: usage_00028.pdb # 5: usage_00032.pdb # 6: usage_00045.pdb # 7: usage_00046.pdb # 8: usage_00052.pdb # # Length: 113 # Identity: 19/113 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/113 ( 44.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/113 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -IELTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEG-VP 58 usage_00009.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADG-VP 59 usage_00017.pdb 1 -IVLTQSPAIMSASLGSSVTLTCSASSSVS-YMHWYQQKSGTSPVLLIYTTSNLASG-VP 57 usage_00028.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADG-VP 59 usage_00032.pdb 1 DVQMTQSPASLSVSVGETVTITCRASENIYRNLAWYQQKQGKSPQLLVYAATNLAAG-VP 59 usage_00045.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADG-VP 59 usage_00046.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADG-VP 59 usage_00052.pdb 1 --QVEQSPASLVLQEGENAELQCTYSTTLN-SMQWFYQRPGGRLVSLLY-------EQRG 50 tQsPasls s Ge vt tC aS WyqQk G sp L Y g vp usage_00001.pdb 59 SRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG--TPPLTFGGGTKLEI--- 106 usage_00009.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWS--TPWTFGGGTKLEI---- 106 usage_00017.pdb 58 SRFSGSGSGTFYSLTISSVEASDAADYYCHQWSS--YPWTFGGGTKLEI---- 104 usage_00028.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWS--TPWTFGGGTKLEI---- 106 usage_00032.pdb 60 SRFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWN--IPFTFGSGTKLEI---- 106 usage_00045.pdb 60 SRFSGSESGTQYSLKINSLQPEDFGSYYCQHFWS--TPFTFGSGTKLEL---- 106 usage_00046.pdb 60 SRFSGSESGTQYSLKINSLQPEDFGSYYCQHFWS--TPFTFGSGTKLELKRGT 110 usage_00052.pdb 51 GRLTSSA-ASRSSLHISSSQITDSGTYLCAIASSSFSKLVFGQ---------- 92 sRfsgS gt SL I S D g YyC p fg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################