################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:23 2021 # Report_file: c_1025_24.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00080.pdb # 2: usage_00097.pdb # 3: usage_00116.pdb # 4: usage_00265.pdb # 5: usage_00266.pdb # 6: usage_00267.pdb # 7: usage_00268.pdb # 8: usage_00488.pdb # 9: usage_00612.pdb # 10: usage_00613.pdb # 11: usage_00614.pdb # 12: usage_00615.pdb # # Length: 68 # Identity: 2/ 68 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 68 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 68 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00097.pdb 1 GGKSPALV-F----ADADLERALDAVVFQIFSFNGERCTA--SSRLLVEE-KIFEDFVGK 52 usage_00116.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00265.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00266.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00267.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00268.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00488.pdb 1 -DTVVIFDSDWNPQ---ADLQAMARAHR------IGQKNHVM-VYRLVSKDTVEEEVLER 49 usage_00612.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00613.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00614.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 usage_00615.pdb 1 GGKDSAIV-L----EDADLELTAKNIIAGAFGYSGQRCTA--VKRVLVME-SVADELVEK 52 gk a v dle g rcta r LV e v e vek usage_00080.pdb 53 IREKVLAL 60 usage_00097.pdb 53 VVERARAI 60 usage_00116.pdb 53 IREKVLAL 60 usage_00265.pdb 53 IREKVLAL 60 usage_00266.pdb 53 IREKVLAL 60 usage_00267.pdb 53 IREKVLAL 60 usage_00268.pdb 53 IREKVLAL 60 usage_00488.pdb 50 ARKKMILE 57 usage_00612.pdb 53 IREKVLAL 60 usage_00613.pdb 53 IREKVLAL 60 usage_00614.pdb 53 IREKVLAL 60 usage_00615.pdb 53 IREKVLAL 60 rek a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################