################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:53 2021 # Report_file: c_1151_45.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00578.pdb # 2: usage_00962.pdb # 3: usage_01634.pdb # 4: usage_01635.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 62 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 62 ( 67.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00578.pdb 1 --IGRASFDLPYTGTVKITCKNG--------------------SVLQYETKG-QYKGVAY 37 usage_00962.pdb 1 -----------KTACTFNYTKT-LKNKYFEPRDSYFQQYMLKGEYQYWFDLE-------- 40 usage_01634.pdb 1 VE---------KTACTFNYTKT-LKNKYFEPRDSYFQQYMLKGEYQYWFDLEV------- 43 usage_01635.pdb 1 -----------KTACTFNYTKT-LKNKYFEPRDSYFQQYMLKGEYQYWFDLE-------- 40 kTactfnytKt eyqywfdle usage_00578.pdb 38 TD 39 usage_00962.pdb -- usage_01634.pdb -- usage_01635.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################