################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:25:32 2021 # Report_file: c_0629_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00106.pdb # 2: usage_00107.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # 5: usage_00112.pdb # 6: usage_00113.pdb # 7: usage_00137.pdb # 8: usage_00138.pdb # 9: usage_00139.pdb # 10: usage_00178.pdb # 11: usage_00179.pdb # 12: usage_00180.pdb # 13: usage_00181.pdb # 14: usage_00237.pdb # 15: usage_00240.pdb # # Length: 102 # Identity: 39/102 ( 38.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/102 ( 42.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/102 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 -PVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 59 usage_00107.pdb 1 -PVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 59 usage_00108.pdb 1 -PVQRRIVYAMSELGLKSSGKPKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYP 59 usage_00109.pdb 1 KPVQRRIVYAMSELGLKSSGKPKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYP 60 usage_00112.pdb 1 -PVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 59 usage_00113.pdb 1 KPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 60 usage_00137.pdb 1 KPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 60 usage_00138.pdb 1 KPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 60 usage_00139.pdb 1 KPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 60 usage_00178.pdb 1 -PVHRRVLYA-NVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVR-AQPFSLRY- 56 usage_00179.pdb 1 KPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYM 60 usage_00180.pdb 1 -PVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYM 59 usage_00181.pdb 1 KPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYM 60 usage_00237.pdb 1 KPVHRRVLFAMDVLGNDWNKAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYM 60 usage_00240.pdb 1 -PVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP 59 PV RR y G KKSAR VGDV GKYHPHGDs Y V AQ FS RY usage_00106.pdb 60 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELLR----- 94 usage_00107.pdb 60 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELLR----- 94 usage_00108.pdb 60 LIEGQGNWGSPDDPK-SFAAMRYTEAKLSAYSELLLSELGQG 100 usage_00109.pdb 61 LIEGQGNWGSPDD--PKSFAAMRTEAKLSAYSELLLSELGQ- 99 usage_00112.pdb 60 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELLR----- 94 usage_00113.pdb 61 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELLR----- 95 usage_00137.pdb 61 LVDGQGNFGSMDG--DGAAAMRTEARMTKITLELLR------ 94 usage_00138.pdb 61 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELL------ 94 usage_00139.pdb 61 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELL------ 94 usage_00178.pdb 57 LVDGQGNFGSIDG--DSAAARYTEIRL-AKIAHELA------ 89 usage_00179.pdb 61 LVDGQGNFGSIDG--DSAAAMRYTEIRLAKIAHELMA----- 95 usage_00180.pdb 60 LVDGQGNFGSIDG--DSAAAMRYTEIRLAKIAHELMA----- 94 usage_00181.pdb 61 LVDGQGNFGSIDG--DSAAAMRYTEIRLAKIAHELMADLEK- 99 usage_00237.pdb 61 LVDGQGNFGSVDG--DSAAAMRYTEIRMSKIAHSILA----- 95 usage_00240.pdb 60 LVDGQGNFGSMDG--DGAAAMRFTEARMTKITLELLR----- 94 L GQGN GS D aA l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################