################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:20 2021 # Report_file: c_0699_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00299.pdb # 2: usage_00343.pdb # 3: usage_00350.pdb # 4: usage_00769.pdb # 5: usage_00867.pdb # 6: usage_01650.pdb # # Length: 78 # Identity: 45/ 78 ( 57.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 78 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 78 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00299.pdb 1 ---YVRTGIYHGGE-PLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 56 usage_00343.pdb 1 ---YVRTGIYHGGE-PLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 56 usage_00350.pdb 1 ---YVRTGIYHGGE-PLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 56 usage_00769.pdb 1 ---YVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSH- 55 usage_00867.pdb 1 DKIYVRTGIYHGGE-PLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSV- 58 usage_01650.pdb 1 ---YVRTGIYHGGE-PLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVE 56 YVRTGIYHGGE plcdnvntq VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSv usage_00299.pdb 57 GRKG-----WGNINLF-- 67 usage_00343.pdb 57 GRK-----PLAWGNIN-- 67 usage_00350.pdb 57 GRKGAKE-PLAWGNIN-- 71 usage_00769.pdb 56 -------CPLAWGNIN-- 64 usage_00867.pdb 59 -------CPLAWGNINLF 69 usage_01650.pdb 57 H------CPLAWGNIN-- 66 lawgNin #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################