################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:01 2021 # Report_file: c_1487_45.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_01846.pdb # 2: usage_01847.pdb # 3: usage_01848.pdb # 4: usage_01849.pdb # 5: usage_01924.pdb # 6: usage_02630.pdb # 7: usage_02631.pdb # 8: usage_02632.pdb # 9: usage_02635.pdb # 10: usage_02660.pdb # 11: usage_02661.pdb # 12: usage_04556.pdb # 13: usage_04842.pdb # 14: usage_05013.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 41 ( 2.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 41 ( 53.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01846.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_01847.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_01848.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_01849.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_01924.pdb 1 -------CRLGISYPELTEM-----QARAIFEAAIAMTNQG 29 usage_02630.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_02631.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_02632.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_02635.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_02660.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHD--- 26 usage_02661.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDRTG 29 usage_04556.pdb 1 HE-----EIAKFEAV-ASRWWDLEGEFKPLHRIN------- 28 usage_04842.pdb 1 -------LSLAAKFPKFVDT-----VTHIANEFRDIHDR-- 27 usage_05013.pdb 1 MEAILSKMKEVVENP---NA-----AVKKYKSETG------ 27 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################