################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:34 2021 # Report_file: c_1187_99.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00297.pdb # 2: usage_00353.pdb # 3: usage_00354.pdb # 4: usage_00355.pdb # # Length: 36 # Identity: 1/ 36 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 36 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 36 ( 55.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00297.pdb 1 -----------QSWGWDLGRNKLYHDSKNCAGVTYP 25 usage_00353.pdb 1 VSTPVGYDKDNCQRIFKKEDCKYIVV---------E 27 usage_00354.pdb 1 VSTPVGYDKDNCQRIFKKEDCKYIVV---------E 27 usage_00355.pdb 1 VSTPVGYDKDNCQRIFKKEDCKYIVV---------E 27 cqrifkkedcKyivv e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################