################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:55 2021 # Report_file: c_1200_492.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00079.pdb # 2: usage_00314.pdb # 3: usage_01440.pdb # 4: usage_01772.pdb # 5: usage_01928.pdb # 6: usage_02106.pdb # 7: usage_02177.pdb # 8: usage_02178.pdb # 9: usage_02179.pdb # 10: usage_02180.pdb # 11: usage_02872.pdb # 12: usage_03954.pdb # 13: usage_04110.pdb # 14: usage_04111.pdb # 15: usage_04306.pdb # 16: usage_04450.pdb # 17: usage_04763.pdb # 18: usage_05287.pdb # # Length: 46 # Identity: 4/ 46 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 46 ( 17.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 46 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 -TTPPSVYPLAP-G--SAAQ-TNSMVTLGCLVKGYFPEPVTVTW-- 39 usage_00314.pdb 1 -----SVFPLAP-S---------GTAALGCLVKDYFPEPVTVSW-- 29 usage_01440.pdb 1 ------VYPLAP-G--S--Q-TNSMVTLGCLVKGYFPEPVTVTW-- 32 usage_01772.pdb 1 KDTTPTVKVTGNELED-------GNMTLECTVNSFYPPDVITKW-- 37 usage_01928.pdb 1 ------VFPLAP------ST-SGATAALGCLVKDYFPEPVTVSW-- 31 usage_02106.pdb 1 ------VYPLAP-G---------SMVTLGCLVKGYFPEPVTVTW-- 28 usage_02177.pdb 1 ------VYPLAP-V--CGGT-TGSSVTLGCLVKGYFPEPVTLTW-- 34 usage_02178.pdb 1 ------VYPLAP-V--CGGT-TGSSVTLGCLVKGYFPEPVTLTW-- 34 usage_02179.pdb 1 ------VYPLAP-V--CGGT-TGSSVTLGCLVKGYFPEPVTLTW-- 34 usage_02180.pdb 1 ------VYPLAP-V--CGGT-TGSSVTLGCLVKGYFPEPVTLTW-- 34 usage_02872.pdb 1 -----KTHMTHH------A-VSDHEATLRCWALSFYPAEITLTW-- 32 usage_03954.pdb 1 ------VYPLAP-V--C-------SVTLGCLVKGYFPEPVTLTW-- 28 usage_04110.pdb 1 -TTPPSVYPLAP-G--CGDT-TGSSVTLGCLVKGYFPESVTVTW-- 39 usage_04111.pdb 1 -TTPPSVYPLAP-G--CGDT-TGSSVTLGCLVKGYFPESVTVTW-- 39 usage_04306.pdb 1 ------VYPLAP-V--CGDT-TGSSVTLGCLVKGYFPESVTLLW-- 34 usage_04450.pdb 1 -TTPPSVYPLAP-G--C--T-TGSSVTLGCLVKGYFPESVTVTWNS 39 usage_04763.pdb 1 -----SVYPLAP-G--G-GA-TNSMVTLGCLVKGYFPEPVTVTW-- 34 usage_05287.pdb 1 -TTPPSVYPLAP-G--CGDT-TGSSVTLGCLVKGYFPESVTVTW-- 39 v L C v P vt W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################