################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:20 2021 # Report_file: c_0177_21.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00031.pdb # 4: usage_00051.pdb # 5: usage_00068.pdb # 6: usage_00069.pdb # 7: usage_00070.pdb # 8: usage_00143.pdb # # Length: 207 # Identity: 40/207 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/207 ( 32.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/207 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -TILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSK--------REAI---ARIEKI- 46 usage_00010.pdb 1 GTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSK--------REAI---ARIEKI- 47 usage_00031.pdb 1 EKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAF--RGGGSLPESL---RRVQEL- 53 usage_00051.pdb 1 -RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGK------SDHVETRENVARKL 53 usage_00068.pdb 1 GSVLVTGGTGYIGSFTTLALLEA-GYKVVVADNLYNSS--------AEAL---NRIELI- 47 usage_00069.pdb 1 GSVLVTGGTGYIGSFTTLALLEA-GYKVVVADNLYNSS--------AEAL---NRIELI- 47 usage_00070.pdb 1 GSVLVTGGTGYIGSFTTLALLEA-GYKVVVADNLYNSS--------AEAL---NRIELI- 47 usage_00143.pdb 1 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNST--------YDSV---ARLEVL- 47 LVtGG GYIGS t Ll gy V Dnl n r usage_00009.pdb 47 ----------TGKTPAFHETDVSDERALARIFDAH-PITAAIHFAALKAVGESVAKPIEY 95 usage_00010.pdb 48 ----------TGKTPAFHETDVSDERALARIFDAH-PITAAIHFAALKAVGESVAKPIEY 96 usage_00031.pdb 54 ----------TGRSVEFEEMDILDQGALQRLFKKY-SFMAVIHFAGLKAVGESVQKPLDY 102 usage_00051.pdb 54 QQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKY 113 usage_00068.pdb 48 ----------SGKKAEFAQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDY 97 usage_00069.pdb 48 ----------SGKKAEFAQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDY 97 usage_00070.pdb 48 ----------SGKKAEFAQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDY 97 usage_00143.pdb 48 ----------TKHHIPFYEVDLCDRKGLEKVFKEY-KIDSVIHFAGLKAVGESTQIPLRY 96 f D d F i iHfa lkAVGES P Y usage_00009.pdb 96 YRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE--------RSPIDETFP-LSATNP 146 usage_00010.pdb 97 YRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE--------RSPIDETFP-LSATNP 147 usage_00031.pdb 103 YRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ--------YLPLDEAHPTGGCTNP 154 usage_00051.pdb 114 YDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMTNA-----EPIDINAK-KSPESP 167 usage_00068.pdb 98 YHVNVYGTICLLRSMVRHNVTNIVFSSSATVYGDAT----RFPDMIPIPEHCP-LGPTNP 152 usage_00069.pdb 98 YHVNVYGTICLLRSMVRHNVTNIVFSSSATVYGDAT----RFPDMIPIPEHCP-LGPTNP 152 usage_00070.pdb 98 YHVNVYGTICLLRSMVRHNVTNIVFSSSATVYGDAT----RFPDMIPIPEHCP-LGPTNP 152 usage_00143.pdb 97 YHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDAT----RFPNMIPIPEECP-LGPTNP 151 Y N LL M v vFSSSAtvyG Pi e p tnP usage_00009.pdb 147 YGQTKLMAEQILRDVEAAD-------- 165 usage_00010.pdb 148 YGQTKLMAEQILRDVEAAD-------- 166 usage_00031.pdb 155 YGKSKFFIEEMIRDLCQA--------- 172 usage_00051.pdb 168 YGESKLIAERMIRDCAEAYG------- 187 usage_00068.pdb 153 YGNTKFAIELAITDVINAQRNNAKKAG 179 usage_00069.pdb 153 YGNTKFAIELAITDVINAQRNNAKKAG 179 usage_00070.pdb 153 YGNTKFAIELAITDVINAQRNNAKKAG 179 usage_00143.pdb 152 YGHTKYAIENILNDLYNSD-------- 170 YG K E D a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################