################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:47 2021 # Report_file: c_0261_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00007.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00146.pdb # 7: usage_00157.pdb # 8: usage_00158.pdb # # Length: 202 # Identity: 41/202 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/202 ( 45.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/202 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -------------------------AAYASTLDAQFGSVTPENEMKWDAVESSRNSFSFS 35 usage_00011.pdb 1 IDAKFKAHGKKYLGTIGDQYTLTKNTKNPAIIKADFGQLTPENSMKWDATEPNRGQFTFS 60 usage_00012.pdb 1 --------------------------KNPAIIKADFGQLTPENSMKWDATEPNRGQFTFS 34 usage_00013.pdb 1 --------------------------KNPAIIKADFGQLTPENSMKWDATEPNRGQFTFS 34 usage_00014.pdb 1 --------------------------KNPAIIKADFGQLTPENSMKWDATEPNRGQFTFS 34 usage_00146.pdb 1 -------------------------AAYLKVLKQNFGEITPANAMKFMYTETEQNVFNFT 35 usage_00157.pdb 1 --------------------------KTPAIIKADFGALTPENSMKWDATEPSRGQFSFS 34 usage_00158.pdb 1 --------------------------KTPAIIKADFGALTPENSMKWDATEPSRGQFSFS 34 ka FG TPeN MKwdatE r F Fs usage_00007.pdb 36 AADRIVSHAQSKGMKVRGHTLVWHSQLPGWVSPLA-A-TDLRSAMNNHITQVMTHYKGKI 93 usage_00011.pdb 61 GSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDK-NTLISVLKNHITTVMTRYKGKI 119 usage_00012.pdb 35 GSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDK-NTLISVLKNHITTVMTRYKGKI 93 usage_00013.pdb 35 GSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDK-NTLISVLKNHITTVMTRYKGKI 93 usage_00014.pdb 35 GSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDK-NTLISVLKNHITTVMTRYKGKI 93 usage_00146.pdb 36 EGEQFLEVAERFGSKVRCHNLVWASQVSDFVTSKTWTAKELTAVMKNHIFKTVQHFGRRC 95 usage_00157.pdb 35 GSDYLVNFAQSNNKLIRGHTLVWHSQLPSWVQSITDK-NTLIEVMKNHITTVMQHYKGKI 93 usage_00158.pdb 35 GSDYLVNFAQSNNKLIRGHTLVWHSQLPSWVQSITDK-NTLIEVMKNHITTVMQHYKGKI 93 d v Aqs RgHtLVWhSQlp wV s t L v kNHIt vm ykgki usage_00007.pdb 94 HSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVD-----ADAKLCYNDYNT 148 usage_00011.pdb 120 YAWDVLNEIFNED--GSLRNSVFYNVIGEDYVRIAFETARSVD-----PNAKLYINDYNL 172 usage_00012.pdb 94 YAWDVLNEIFNED--GSLRNSVFYNVIGEDYVRIAFETARSVD-----PNAKLYINDYNL 146 usage_00013.pdb 94 YAWDVLNEIFNED--GSLRNSVFYNVIGEDYVRIAFETARSVD-----PNAKLYINDYNL 146 usage_00014.pdb 94 YAWDVLNEIFNED--GSLRNSVFYNVIGEDYVRIAFETARSVD-----PNAKLYINDYNL 146 usage_00146.pdb 96 YSWDVVNEALNGD--GTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDYGI 153 usage_00157.pdb 94 YAWDVVNEIFNED--GSLRDSVFYKVIGEDYVRIAFETARAAD-----PNAKLYINDYNL 146 usage_00158.pdb 94 YAWDVVNEIFNED--GSLRDSVFYKVIGEDYVRIAFETARAAD-----PNAKLYINDYNL 146 y WDV NE fn d G r Svfy iGe y AF tAr d aKLy NDYn usage_00007.pdb 149 DGQ-NAKSNAVYEMVKDFKQR- 168 usage_00011.pdb 173 DSAGYSKVNGMVSHVKKWLAAG 194 usage_00012.pdb 147 DSAGYSKVNGMVSHVKKWLAAG 168 usage_00013.pdb 147 DSAGYSKVNGMVSHVKKWLAAG 168 usage_00014.pdb 147 DSAGYSKVNGMVSHVKKWLAAG 168 usage_00146.pdb 154 ENP-GTKSTAVLQLVSNLRKRG 174 usage_00157.pdb 147 DSASYPKLTGMVSHVKKWIAAG 168 usage_00158.pdb 147 DSASYPKLTGMVSHVKKWIAAG 168 d K Vk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################