################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:27 2021 # Report_file: c_1488_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_03402.pdb # 2: usage_03403.pdb # 3: usage_03404.pdb # 4: usage_03405.pdb # 5: usage_03406.pdb # 6: usage_03408.pdb # 7: usage_03409.pdb # 8: usage_03688.pdb # 9: usage_03690.pdb # 10: usage_06371.pdb # 11: usage_08057.pdb # # Length: 36 # Identity: 1/ 36 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 36 ( 47.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 36 ( 52.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03402.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03403.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03404.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03405.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03406.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03408.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSS-- 27 usage_03409.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03688.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_03690.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 usage_06371.pdb 1 ----------GTALIFLLLPETLVIFGLLIAFILNG 26 usage_08057.pdb 1 TKADYDLYCH-------YVAGLVGHGLTLLYVSSG- 28 yvaglvghgltLlyvss #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################