################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:20 2021 # Report_file: c_0736_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00022.pdb # 2: usage_00053.pdb # 3: usage_00141.pdb # 4: usage_00252.pdb # 5: usage_00254.pdb # 6: usage_00255.pdb # 7: usage_00260.pdb # 8: usage_00295.pdb # 9: usage_00468.pdb # # Length: 54 # Identity: 15/ 54 ( 27.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 54 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 54 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 -AKTKPRE-QQFNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKGLPSSIEKTIS- 51 usage_00053.pdb 1 --NA-KTKP---R----VVSVLTVLHQDWLNGKEYKCKV--------IEKTISK 36 usage_00141.pdb 1 ----EQ---QY-NSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTIS- 45 usage_00252.pdb 1 -TKPRE-Q-Q--NSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISK 49 usage_00254.pdb 1 KTKPRE-Q-QY-NSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISK 51 usage_00255.pdb 1 NAKTKPREEQF-NSTFRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK 53 usage_00260.pdb 1 KTKPRE-E-QY-NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTIS- 50 usage_00295.pdb 1 --A-PEK--QS-NSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISK 48 usage_00468.pdb 1 -AKTKPREEQY-NSTYRVVSVLTVLHQDWLNGKEYKCKVSN-------EKTISK 45 n vVSvLtvlhq WL GKeyKCKV EKtIS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################