################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:17 2021 # Report_file: c_0927_30.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00179.pdb # 2: usage_00200.pdb # 3: usage_00207.pdb # 4: usage_00239.pdb # 5: usage_00477.pdb # 6: usage_00610.pdb # # Length: 41 # Identity: 1/ 41 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 41 ( 14.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 41 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 RKADVIMLDG---KHIIEAVVDLQN-----NKLLSWQPIKD 33 usage_00200.pdb 1 RKADVIMLDG---KHIIEAVVDLQN-----NKLLSWQPIKD 33 usage_00207.pdb 1 RKADVIMLDG---KHIIEAVVDLQN-----NKLLSWQPIKD 33 usage_00239.pdb 1 T-KVVCVLKGDGPVQGIINFEQ---KESNGPVKVWGSIKG- 36 usage_00477.pdb 1 -----AKVDG-----NRIVVRY-ED-----GRLVEYPLRRF 25 usage_00610.pdb 1 RKADVIMLDG---KHIIEAVVDLQN-----NKLLSWQPIKD 33 ldG i v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################