################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:08:39 2021 # Report_file: c_0121_18.html ################################################################################################ #==================================== # Aligned_structures: 44 # 1: usage_00002.pdb # 2: usage_00039.pdb # 3: usage_00046.pdb # 4: usage_00047.pdb # 5: usage_00053.pdb # 6: usage_00054.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00073.pdb # 10: usage_00080.pdb # 11: usage_00092.pdb # 12: usage_00098.pdb # 13: usage_00099.pdb # 14: usage_00100.pdb # 15: usage_00158.pdb # 16: usage_00164.pdb # 17: usage_00215.pdb # 18: usage_00216.pdb # 19: usage_00217.pdb # 20: usage_00218.pdb # 21: usage_00219.pdb # 22: usage_00282.pdb # 23: usage_00283.pdb # 24: usage_00284.pdb # 25: usage_00295.pdb # 26: usage_00296.pdb # 27: usage_00330.pdb # 28: usage_00335.pdb # 29: usage_00378.pdb # 30: usage_00379.pdb # 31: usage_00388.pdb # 32: usage_00389.pdb # 33: usage_00404.pdb # 34: usage_00405.pdb # 35: usage_00471.pdb # 36: usage_00472.pdb # 37: usage_00497.pdb # 38: usage_00506.pdb # 39: usage_00508.pdb # 40: usage_00513.pdb # 41: usage_00529.pdb # 42: usage_00531.pdb # 43: usage_00537.pdb # 44: usage_00538.pdb # # Length: 131 # Identity: 22/131 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/131 ( 20.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/131 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -QLVQSGPELRKPGETVKISCKGSGYTFTHYGINWVKQTPSKDLKWMGWINTHTGEPIYA 59 usage_00039.pdb 1 VQLEQSGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTYA 60 usage_00046.pdb 1 LQLVQSGPQLKKPGETVRISCKASGYTFTTAGIQWVQRLPGKDLKWIGWINTHSGVPQYA 60 usage_00047.pdb 1 LQLVQSGPQLKKPGETVRISCKASGYTFTTAGIQWVQRLPGKDLKWIGWINTHSGVPQYA 60 usage_00053.pdb 1 IQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFA 60 usage_00054.pdb 1 IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWMKQAPGKGFKWMGWIKTNTGEPTYA 60 usage_00064.pdb 1 -QLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYV 59 usage_00065.pdb 1 -QLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYV 59 usage_00073.pdb 1 IQLVQSGPELKKPGETVRISCKASGYSFTTYGMNWVKQAPGKGLKWMGWINTYSGVPTYA 60 usage_00080.pdb 1 -QLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYV 59 usage_00092.pdb 1 -QLVQSGPELKKPGETVRISCKASGYSFTTYGMNWVKQAPGKGLKWMGWINTYSGVPTYA 59 usage_00098.pdb 1 IQLVQSGPGLKKPGQTVKISCKASGYSFTDYGMNWVKQAPGKGLEWMGWINTSNGYTTYG 60 usage_00099.pdb 1 IQLVQSGPGLKKPGQTVKISCKASGYSFTDYGMNWVKQAPGKGLEWMGWINTSNGYTTYG 60 usage_00100.pdb 1 IQLVQSGPGLKKPGQTVKISCKASGYSFTDYGMNWVKQAPGKGLEWMGWINTSNGYTTYG 60 usage_00158.pdb 1 IQLVQSGPELKKPGETVKISCKASGYTFTNYGMTWVKQAPRKGLKWMGWINTYTGRPTYA 60 usage_00164.pdb 1 IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNLVKQAPGKGFEWMGWINTFTGEPTYA 60 usage_00215.pdb 1 IQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYA 60 usage_00216.pdb 1 IQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYA 60 usage_00217.pdb 1 IQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYA 60 usage_00218.pdb 1 IQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYA 60 usage_00219.pdb 1 -QLVQSGPELKKPGETVRISCKASD--Y-TSGMQWVQQMPGKGLKWIGWLNTQSGVPEYA 56 usage_00282.pdb 1 VQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKWMGWINPYTGESTFA 60 usage_00283.pdb 1 VQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKWMGWINPYTGESTFA 60 usage_00284.pdb 1 VQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKWMGWINPYTGESTFA 60 usage_00295.pdb 1 IQLVQSGPEVQKPGETVRISCKASGYTFTTAGMQWVQKMPGKSLKWIGWINTRSGVPKYA 60 usage_00296.pdb 1 IQLVQSGPEVQKPGETVRISCKASGYTFTTAGMQWVQKMPGKSLKWIGWINTRSGVPKYA 60 usage_00330.pdb 1 IQLVQSGPELKKPGETVRISCKASGYAFTTTGMQWVQEMPGKGLKWIGWINTHSGVPKYV 60 usage_00335.pdb 1 IQLVQSGPELKTPGETVRISCKASGYTFTTYGMSWVKQTPGKGFKWMGWINTYSGVPTYA 60 usage_00378.pdb 1 -QLVQSGPELKKPGETVRISCKASGYIFTIAGIQWVQKMPGRGLRWIGWINTHSGVPEYA 59 usage_00379.pdb 1 -QLVQSGPELKKPGETVRISCKASGYIFTIAGIQWVQKMPGRGLRWIGWINTHSGVPEYA 59 usage_00388.pdb 1 VQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKWMGWINPYTGESTFA 60 usage_00389.pdb 1 VQLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKWMGWINPYTGESTFA 60 usage_00404.pdb 1 VQLVQSGPELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGETTYA 60 usage_00405.pdb 1 VQLVQSGPELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGETTYA 60 usage_00471.pdb 1 VQLLESGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTYA 60 usage_00472.pdb 1 VQLLESGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTYA 60 usage_00497.pdb 1 VQLQQSGPELKKPGETVKISCKLW-YTFTDYGMNWVKQAPGKGLKWMGWIQTNTEEPTYG 59 usage_00506.pdb 1 IQLVQSGPELKTPGETVRISCKASGYTFTTYGMSWVKQTPGKGFKWMGWINTYSGVPTYA 60 usage_00508.pdb 1 IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNLVKQAPGKGFEWMGWINTFTGEPTYA 60 usage_00513.pdb 1 IQLVQSGPELKKPGETVRISCKASD--YMTSGMQWVQQMPGKGLKWIGWLNTQSGVPEYA 58 usage_00529.pdb 1 VQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFA 60 usage_00531.pdb 1 IQLVQSGPELKKPGETVKISCKASGYTFINYGMNWVKQAPGKGLKWMGWKNTNTGETTYG 60 usage_00537.pdb 1 VQLVQSGPELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGETTYA 60 usage_00538.pdb 1 VQLVQSGPELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGETTYA 60 QL SG PG V SCK v P G usage_00002.pdb 60 DDFKGRFAFSLETSANTAYLQINNLNNGDMGTYFCTRSH----------R-----FGLDY 104 usage_00039.pdb 61 DDFKERFAFSLETSASAAYLQINNLKNEDTATYFCARDYY---GSTYPYY-----AMDYW 112 usage_00046.pdb 61 DDFKGRFAFSLETSASTAFLQIINLKNEDTATYFCARNY----------YRFD--GGMDF 108 usage_00047.pdb 61 DDFKGRFAFSLETSASTAFLQIINLKNEDTATYFCARNY----------YRFD--GGMDF 108 usage_00053.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDMATYFCARGT----------TIVR--AMDYW 108 usage_00054.pdb 61 EDFKGRFAFSLEASANTAYLQINNLKNEDTATYFCARLR----------A-----VDYWG 105 usage_00064.pdb 60 DDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGD----------YVNW--YFDVW 107 usage_00065.pdb 60 DDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGD----------YVNW--YFDVW 107 usage_00073.pdb 61 DDFKGRFAFSLETSASTAYLQINILKNEDTATYFCARRR----------SYSN--YFDYW 108 usage_00080.pdb 60 DDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGD----------YVNW--YFDVW 107 usage_00092.pdb 60 DDFKGRFAFSLETSASTAYLQINILKNEDTATYFCARRR----------SDSN--YFDYW 107 usage_00098.pdb 61 AAFKGRFSFSVDNSASTAYLQLSNLKTADTAVYFCARSW----------YNRA--MDYWG 108 usage_00099.pdb 61 AAFKGRFSFSVDNSASTAYLQLSNLKTADTAVYFCARSW----------YNRA--MDYWG 108 usage_00100.pdb 61 AAFKGRFSFSVDNSASTAYLQLSNLKTADTAVYFCARSW----------YNRA--MDYWG 108 usage_00158.pdb 61 DDFKGRFAFSLETSASTAYLQINNLKHEDTATYFCASLG----------E-------DFW 103 usage_00164.pdb 61 DDFKGRFVFSLDTSASTAYLQINNLKNEDTATYFFTRG------------------TDYW 102 usage_00215.pdb 61 EEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDY----------F-----ISLDY 105 usage_00216.pdb 61 EEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDY----------F-----ISLDY 105 usage_00217.pdb 61 EEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDY----------F-----ISLDY 105 usage_00218.pdb 61 EEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDY----------F-----ISLDY 105 usage_00219.pdb 57 EDFKGRFAFSLE---TTAYLQINNLKNEDTATYFCATWG----------G-----NSAYW 98 usage_00282.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDTATYFCARGT----------TIVW--AMDYW 108 usage_00283.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDTATYFCARGT----------TIVW--AMDYW 108 usage_00284.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDTATYFCARGT----------TIVW--AMDYW 108 usage_00295.pdb 61 EDFKGRFAFSLETSASIAYLHINNLKNEDTATYFCAREG----------P-----GFVYW 105 usage_00296.pdb 61 EDFKGRFAFSLETSASIAYLHINNLKNEDTATYFCAREG----------P-----GFVYW 105 usage_00330.pdb 61 EDFKGRFAFSLETSANTAYLQISNLKNEDTATYFCVRSGNGNYD----LA-----YFAYW 111 usage_00335.pdb 61 DDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCARRS----------W-----YFDVW 105 usage_00378.pdb 60 EEFKGRFAFSLETSARTAYLQISNLKDEDTATYFCARIY----------YGNNGGVMDYW 109 usage_00379.pdb 60 EEFKGRFAFSLETSARTAYLQISNLKDEDTATYFCARIY----------YGNNGGVMDYW 109 usage_00388.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDTATYFCARGT----------TIVR--AFDYW 108 usage_00389.pdb 61 DDFKGRFAFFLETSATTAYLQINNLKNEDTATYFCARGT----------TIVR--AFDYW 108 usage_00404.pdb 61 DDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCEREG----------G-----VNNWG 105 usage_00405.pdb 61 DDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCEREG----------G-----VNNWG 105 usage_00471.pdb 61 DDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCVQAE----------RLRR--TFDYW 108 usage_00472.pdb 61 DDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCVQAE----------RLRR--TFDYW 108 usage_00497.pdb 60 AEFKGRFAFSLETSAFTAYKQINNLKNEDMATYFCARVE----------A-----GFDYW 104 usage_00506.pdb 61 DDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCARRS----------W-----YFDVW 105 usage_00508.pdb 61 DDFKGRFVFSLDTSASTAYLQINNLKNEDTATYFFTRG------------------TDYW 102 usage_00513.pdb 59 EDFKGRFAFSLE---TTAYLQINNLKNEDTATYFCATWG----------G-----NSAYW 100 usage_00529.pdb 61 DDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDR----------HDYG--EIFTY 108 usage_00531.pdb 61 EEFRGRFAFSLETSVSTAYLQINNLKNEDTATYFCARDN----------PYYA--LDYWG 108 usage_00537.pdb 61 DDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCEREG----------G-----VNNWG 105 usage_00538.pdb 61 DDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCEREG----------G-----VNNWG 105 FkgRF F A l L D a Y usage_00002.pdb 105 WGQ-GTSVTVS 114 usage_00039.pdb 113 G-Q-GTTVTVS 121 usage_00046.pdb 109 W-GQGTSVTVS 118 usage_00047.pdb 109 W-GQGTSVTVS 118 usage_00053.pdb 109 G-Q-GTSLTVS 117 usage_00054.pdb 106 Q---GTTLTVS 113 usage_00064.pdb 108 G-A-GTTVTVS 116 usage_00065.pdb 108 G-A-GTTVTVS 116 usage_00073.pdb 109 G-Q-GSTLTVS 117 usage_00080.pdb 108 G-A-GTTVTVS 116 usage_00092.pdb 108 G-Q-GSTLTVS 116 usage_00098.pdb 109 Q-G--TSVTVS 116 usage_00099.pdb 109 Q-G--TSVTVS 116 usage_00100.pdb 109 Q-G--TSVTVS 116 usage_00158.pdb 104 G-Q-GTTLTVS 112 usage_00164.pdb 103 G-Q-GTTLTVS 111 usage_00215.pdb 106 WGQ-GTTLTVS 115 usage_00216.pdb 106 WGQ-GTTLTVS 115 usage_00217.pdb 106 WGQ-GTTLTVS 115 usage_00218.pdb 106 WGQ-GTTLTVS 115 usage_00219.pdb 99 G-Q-GTTLTVS 107 usage_00282.pdb 109 G-Q-GTSVTVS 117 usage_00283.pdb 109 G-Q-GTSVTVS 117 usage_00284.pdb 109 G-Q-GTSVTVS 117 usage_00295.pdb 106 G-Q-GTLVTVS 114 usage_00296.pdb 106 G-Q-GTLVTVS 114 usage_00330.pdb 112 G-Q-GTLVTVS 120 usage_00335.pdb 106 G-T-GTTVTVS 114 usage_00378.pdb 110 G-Q-GTSVTV- 117 usage_00379.pdb 110 G-Q-GTSVTVS 118 usage_00388.pdb 109 G-Q-GTSVTVS 117 usage_00389.pdb 109 G-Q-GTSVTVS 117 usage_00404.pdb 106 Q---GTLVTVS 113 usage_00405.pdb 106 Q---GTLVTVS 113 usage_00471.pdb 109 G-A-GTTVTVS 117 usage_00472.pdb 109 G-A-GTTVTVS 117 usage_00497.pdb 105 A-Q-GTTLTVS 113 usage_00506.pdb 106 G-T-GTTVTVS 114 usage_00508.pdb 103 G-Q-GTTLTVS 111 usage_00513.pdb 101 G-Q-GTTLTVS 109 usage_00529.pdb 109 W-GQGTTVTVS 118 usage_00531.pdb 109 Q-G--TTVTVS 116 usage_00537.pdb 106 Q---GTLVTVS 113 usage_00538.pdb 106 Q---GTLVTVS 113 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################