################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:16 2021 # Report_file: c_1243_119.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00384.pdb # 2: usage_00385.pdb # 3: usage_00386.pdb # 4: usage_00387.pdb # 5: usage_00388.pdb # 6: usage_01163.pdb # 7: usage_01164.pdb # 8: usage_01165.pdb # 9: usage_01166.pdb # 10: usage_01194.pdb # # Length: 44 # Identity: 4/ 44 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 44 ( 47.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 44 ( 52.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00384.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIGIVDEVV-SG- 34 usage_00385.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIG---------- 26 usage_00386.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIG---------- 26 usage_00387.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIGIVDEVV-SG- 34 usage_00388.pdb 1 --LLVSGSSARQAHK------S---P-VDLCVIG---------- 22 usage_01163.pdb 1 --LLVSGSSARQAHK------SETSP-VDLCVIGIVDEVV-SG- 33 usage_01164.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIG---------- 26 usage_01165.pdb 1 --LLVSGSSARQAHK------SETSP-VDLCVIG---------- 25 usage_01166.pdb 1 -VLLVSGSSARQAHK------SETSP-VDLCVIG---------- 26 usage_01194.pdb 1 SIRLMDNQQFQFGHALKPQGFD----PNQLSVATL-----LFEG 35 lLvsgssarqaHk s vdLcVig #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################