################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:02 2021 # Report_file: c_0162_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00038.pdb # 2: usage_00054.pdb # 3: usage_00055.pdb # 4: usage_00381.pdb # 5: usage_00382.pdb # 6: usage_00459.pdb # # Length: 140 # Identity: 45/140 ( 32.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/140 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/140 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -GQAIKVTHRETGEVMVMKELIRFDEE--TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 57 usage_00054.pdb 1 --EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 55 usage_00055.pdb 1 --EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 55 usage_00381.pdb 1 -GQAIKVTHRETGEVMVMKELIRFDEE--TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 57 usage_00382.pdb 1 FGQAIKVTHRETGEVMVMKELIRFDEE--TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 58 usage_00459.pdb 1 FGQAIKVTHRETGEVMVMKELIRFDEE--TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 58 K L FLKE VM HPN GV usage_00038.pdb 58 RLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNC 116 usage_00054.pdb 56 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 115 usage_00055.pdb 56 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 115 usage_00381.pdb 58 RLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRNLNSHNC 116 usage_00382.pdb 59 RLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRNLNSHNC 117 usage_00459.pdb 59 RLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNC 117 ITE G L Q A I S M YL N IHR L NC usage_00038.pdb 117 LVRENKNVVVADFGLARLMV 136 usage_00054.pdb 116 LVGENHLVKVADFGLSRLM- 134 usage_00055.pdb 116 LVGENHLVKVADFGLSRLM- 134 usage_00381.pdb 117 LVRENKNVVVADFGLARLM- 135 usage_00382.pdb 118 LVRENKNVVVADFGLARL-- 135 usage_00459.pdb 118 LVRENKNVVVADFGLARLM- 136 LV EN V VADFGL RL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################