################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:05 2021 # Report_file: c_0895_15.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00068.pdb # 2: usage_00088.pdb # 3: usage_00139.pdb # 4: usage_00195.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # 7: usage_00198.pdb # 8: usage_00199.pdb # 9: usage_00200.pdb # # Length: 69 # Identity: 9/ 69 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 69 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 69 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 SPSQVVDWMKGLDDC-LQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAV 59 usage_00088.pdb 1 SVQQVSHWLVGL--S-LDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKL 57 usage_00139.pdb 1 TPGKVATWLRGL--DDSLQDY-PFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGV 57 usage_00195.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 usage_00196.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 usage_00197.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 usage_00198.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 usage_00199.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 usage_00200.pdb 1 GTEEVAAWLEHL--S-LCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGI 57 V Wl L l y F i G LL l L Lgv gh il usage_00068.pdb 60 DLLCALNSG 68 usage_00088.pdb 58 KE------- 59 usage_00139.pdb 58 EQLQALSS- 65 usage_00195.pdb 58 KELSR---- 62 usage_00196.pdb 58 KELS----- 61 usage_00197.pdb 58 KELS----- 61 usage_00198.pdb 58 KELSR---- 62 usage_00199.pdb 58 KEL------ 60 usage_00200.pdb 58 KELSR---- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################