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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:09:59 2021
# Report_file: c_1403_77.html
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#====================================
# Aligned_structures: 10
#   1: usage_00125.pdb
#   2: usage_00959.pdb
#   3: usage_00960.pdb
#   4: usage_00961.pdb
#   5: usage_00962.pdb
#   6: usage_00963.pdb
#   7: usage_00965.pdb
#   8: usage_00966.pdb
#   9: usage_00967.pdb
#  10: usage_01310.pdb
#
# Length:         66
# Identity:       44/ 66 ( 66.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     44/ 66 ( 66.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/ 66 ( 33.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00125.pdb         1  ---LKLFLAQYREV-A--------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   48
usage_00959.pdb         1  --SLKLFLAQYREVAAFAS----DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   54
usage_00960.pdb         1  --SLKLFLAQYREVAAFA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   55
usage_00961.pdb         1  ----------YREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   46
usage_00962.pdb         1  AGSLKLFLAQYREVAAS-------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   53
usage_00963.pdb         1  --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   57
usage_00965.pdb         1  --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   57
usage_00966.pdb         1  --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   57
usage_00967.pdb         1  ---LKLFLAQYREVAAFA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   54
usage_01310.pdb         1  --SLKLFLAQYREVAAFA------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI   52
                                     YREV A        LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI

usage_00125.pdb        49  YAGV--   52
usage_00959.pdb        55  YAG---   57
usage_00960.pdb        56  YAG---   58
usage_00961.pdb        47  YAGVNG   52
usage_00962.pdb        54  YAGVNG   59
usage_00963.pdb        58  YAG---   60
usage_00965.pdb        58  YAGVNG   63
usage_00966.pdb        58  YAGVNG   63
usage_00967.pdb        55  YAGVNG   60
usage_01310.pdb        53  YAGVNG   58
                           YAG   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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