################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:06:20 2021 # Report_file: c_1238_69.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00009.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00117.pdb # 6: usage_00141.pdb # 7: usage_00261.pdb # 8: usage_00275.pdb # 9: usage_00276.pdb # 10: usage_00426.pdb # 11: usage_00522.pdb # 12: usage_00666.pdb # 13: usage_00703.pdb # 14: usage_00820.pdb # 15: usage_01007.pdb # 16: usage_01126.pdb # 17: usage_01134.pdb # 18: usage_01137.pdb # 19: usage_01138.pdb # 20: usage_01180.pdb # 21: usage_01181.pdb # 22: usage_01264.pdb # 23: usage_01280.pdb # 24: usage_01281.pdb # # Length: 27 # Identity: 3/ 27 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 27 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 27 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 RFYTLDSKTWTTGSKGWCWKLPDALK- 26 usage_00039.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_00040.pdb 1 RFYTLDTVTWRKESRGWWWKLPDALK- 26 usage_00041.pdb 1 RFYTLDSKMWNSTSKGWWWKLPDALK- 26 usage_00117.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_00141.pdb 1 RFYTLDSVQWQKTSPGWWWKLPDALS- 26 usage_00261.pdb 1 RFYTLDTVTWRKESRGWWWKLPDALK- 26 usage_00275.pdb 1 RFYTLDSKMWNSTSKGWWWKLPDALK- 26 usage_00276.pdb 1 RFYTLDSKMWNSTSKGWWWKLPDALK- 26 usage_00426.pdb 1 RFYTLRSVTWSSSSKGWWWKLPDALK- 26 usage_00522.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_00666.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_00703.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_00820.pdb 1 ALKRTDN--------GGWAHVVCALY- 18 usage_01007.pdb 1 RFYTLRSVTWSSSSKGWWWKLPDALK- 26 usage_01126.pdb 1 RFYTLDSVEWQVGSHGWWWKLPDALK- 26 usage_01134.pdb 1 RFYTLDSVQWQKTSPGWWWKLPDALS- 26 usage_01137.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALRD 27 usage_01138.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_01180.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_01181.pdb 1 RFYTLDSKMWNSTSKGWWWKLPDALK- 26 usage_01264.pdb 1 RFYTLRSVTWSSSSKGWWWKLPDALK- 26 usage_01280.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 usage_01281.pdb 1 RFYTLDTVSWTKESRGWWWKLPDALR- 26 rfytl GwwwklpdAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################