################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:09 2021 # Report_file: c_0780_69.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00027.pdb # 4: usage_00028.pdb # 5: usage_00034.pdb # 6: usage_00114.pdb # 7: usage_00127.pdb # 8: usage_00128.pdb # 9: usage_00241.pdb # 10: usage_00242.pdb # 11: usage_00319.pdb # 12: usage_00321.pdb # 13: usage_00799.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 62 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 62 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00026.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00027.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00028.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00034.pdb 1 GRVVDLGCGR-GGWSYYAASRPHVMDVRAYTLGVGGHEVPRITE-----SYGW--NIVKF 52 usage_00114.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00127.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00128.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 usage_00241.pdb 1 DVLIDFTHPSVTLKNIEQCRKA-RRAMVIGTTG-----FSAD--EKLLLAEAAKDIPIVF 52 usage_00242.pdb 1 DVLIDFTHPSVTLKNIEQCRKA-RRAMVIGTTG-----FSAD--EKLLLAEAAKDIPIVF 52 usage_00319.pdb 1 EGILDFSQPQASVLYANYAAQK-SLIHIIGTTG-----FSKT--EEAQIADFAKYTTIVK 52 usage_00321.pdb 1 EGILDFSQPQASVLYANYAAQK-SLIHIIGTTG-----FSKT--EEAQIADFAKYTTIVK 52 usage_00799.pdb 1 DVFIDFTRPEGTLNHLAFCRQH-GKGMVIGTTG-----FDEA--GKQAIRDAAADIAIVF 52 Df p igTtG f a iv usage_00025.pdb 53 AA 54 usage_00026.pdb 53 AA 54 usage_00027.pdb 53 AA 54 usage_00028.pdb 53 AA 54 usage_00034.pdb 53 KS 54 usage_00114.pdb 53 AA 54 usage_00127.pdb 53 AA 54 usage_00128.pdb 53 AA 54 usage_00241.pdb 53 AA 54 usage_00242.pdb 53 AA 54 usage_00319.pdb 53 SG 54 usage_00321.pdb 53 SG 54 usage_00799.pdb 53 AA 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################