################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:54 2021 # Report_file: c_1208_121.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00372.pdb # 2: usage_00460.pdb # 3: usage_00461.pdb # 4: usage_00644.pdb # 5: usage_01373.pdb # 6: usage_01374.pdb # 7: usage_01375.pdb # 8: usage_01389.pdb # 9: usage_01390.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 47 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 47 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00372.pdb 1 PNALIRDAGLTE-IPPGTVTVLAVGPAPEEIVDK------------- 33 usage_00460.pdb 1 TVSLIQDAGR-TQIAPGSQTVLGIGPGPADLIDK----------VT- 35 usage_00461.pdb 1 TVSLIQDAT--Q-IAPGSQTVLGIGPGPADLIDK----------V-- 32 usage_00644.pdb 1 GLVVVLQEP------DLTISQISAN--C-TGILGRSPEDLLGRT--- 35 usage_01373.pdb 1 PFSIIEDAGKTQ-LEPGTITCLGIGPAPENLVDS----------IT- 35 usage_01374.pdb 1 PFSIIEDAGKTQ-LEPGTITCLGIGPAPENLVDS----------ITG 36 usage_01375.pdb 1 PFSIIEDAGKTQ-LEPGTITCLGIGPAPENLVDS----------IT- 35 usage_01389.pdb 1 PCSIIRDAGH-----PGTLTAVAIGPEKDEKIDK----------IT- 31 usage_01390.pdb 1 PCSIIRDAG------PGTLTAVAIGPEKDEKIDK----------IT- 30 i da pg t g d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################