################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:10 2021 # Report_file: c_0405_26.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00205.pdb # 3: usage_00309.pdb # 4: usage_00311.pdb # 5: usage_00312.pdb # 6: usage_00326.pdb # 7: usage_00337.pdb # 8: usage_00409.pdb # 9: usage_00426.pdb # 10: usage_00427.pdb # # Length: 80 # Identity: 52/ 80 ( 65.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 80 ( 65.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 80 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEI 59 usage_00205.pdb 1 -PNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDI 59 usage_00309.pdb 1 -PNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEES 59 usage_00311.pdb 1 QPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEES 60 usage_00312.pdb 1 QPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEES 60 usage_00326.pdb 1 QPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDI 60 usage_00337.pdb 1 -PNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDI 59 usage_00409.pdb 1 -PNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDI 59 usage_00426.pdb 1 -PNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDI 59 usage_00427.pdb 1 -PNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDI 59 PN LIC VDNIFPPV NITWL N SV GV ETSF D SF K SYLT PS usage_00001.pdb 60 YDCKVEHWGLDQPLLKHWEP 79 usage_00205.pdb 60 YDCKVEHWGLEEPVLKHWEP 79 usage_00309.pdb 60 YDCKVEHWGLDKPLLKHWEP 79 usage_00311.pdb 61 YDCKVEHWGLDKPLLKHWEP 80 usage_00312.pdb 61 YDCKVEHWGLDKPLLKHWEP 80 usage_00326.pdb 61 YDCKVEHWGLEEPVLKHW-- 78 usage_00337.pdb 60 YDCKVEHWGLEEPVLKHWS- 78 usage_00409.pdb 60 YDCKVEHWGLEEPVLKHWSS 79 usage_00426.pdb 60 YDCKVEHWGLEEPVLKHWEP 79 usage_00427.pdb 60 YDCKVEHWGLEEPVLKHWEP 79 YDCKVEHWGL P LKHW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################