################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:11 2021 # Report_file: c_1256_129.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00585.pdb # 2: usage_01689.pdb # 3: usage_01690.pdb # 4: usage_02796.pdb # 5: usage_02798.pdb # 6: usage_03163.pdb # 7: usage_03164.pdb # 8: usage_03698.pdb # 9: usage_03699.pdb # 10: usage_04186.pdb # 11: usage_04187.pdb # # Length: 35 # Identity: 11/ 35 ( 31.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 35 ( 31.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 35 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00585.pdb 1 NVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASL 35 usage_01689.pdb 1 RVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACL 35 usage_01690.pdb 1 RVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACL 35 usage_02796.pdb 1 NVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASL 35 usage_02798.pdb 1 NVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASL 35 usage_03163.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIAC- 34 usage_03164.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACL 35 usage_03698.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACL 35 usage_03699.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACL 35 usage_04186.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACL 35 usage_04187.pdb 1 HVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACL 35 V IV D DTGKT K A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################