################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:04 2021 # Report_file: c_1428_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00357.pdb # 2: usage_00463.pdb # 3: usage_00464.pdb # 4: usage_00465.pdb # 5: usage_00519.pdb # 6: usage_00520.pdb # 7: usage_00521.pdb # 8: usage_00522.pdb # 9: usage_01770.pdb # 10: usage_01771.pdb # 11: usage_01772.pdb # 12: usage_01889.pdb # # Length: 80 # Identity: 1/ 80 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 80 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 80 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00357.pdb 1 DL---IQKRKVQWLMRTLIDDCAANGWGEYRT-HLAFMDQIMETYNWN-NSSFLRFNE-- 53 usage_00463.pdb 1 -----------RRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 45 usage_00464.pdb 1 -------GCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 49 usage_00465.pdb 1 ------QGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 50 usage_00519.pdb 1 -----RQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 51 usage_00520.pdb 1 ------QGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 50 usage_00521.pdb 1 --------CEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 48 usage_00522.pdb 1 -------GCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 49 usage_01770.pdb 1 -----RQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 51 usage_01771.pdb 1 ----VRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 52 usage_01772.pdb 1 -----------RRSHEHLIRLLLEKGKCPENGWDESTLELFLHELA--IMDSNNFL--GN 45 usage_01889.pdb 1 --KNEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLFLKFLS----DTDKDP--KS 52 lI gk peng d lfl l ds usage_00357.pdb 54 -----------VLKNAV--- 59 usage_00463.pdb 46 CGVGEREGRVASALVARRHY 65 usage_00464.pdb 50 CGVGEREGRVASALVARRHY 69 usage_00465.pdb 51 CGVGEREGRVASALVARRHY 70 usage_00519.pdb 52 CGVGEREGRVASALVARRHY 71 usage_00520.pdb 51 CGVGEREGRVASALVARRHY 70 usage_00521.pdb 49 CGVGEREGRVASALVARRHY 68 usage_00522.pdb 50 CGVGEREGRVASALVARRHY 69 usage_01770.pdb 52 CGVGEREGRVASALVARRHY 71 usage_01771.pdb 53 CGVGEREGRVASALVARRHY 72 usage_01772.pdb 46 CGVGEREGRVASALVARRHY 65 usage_01889.pdb 53 VRIGEREARTYSKIHEELSS 72 s a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################