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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:59:58 2021
# Report_file: c_0148_11.html
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#====================================
# Aligned_structures: 13
#   1: usage_00005.pdb
#   2: usage_00011.pdb
#   3: usage_00029.pdb
#   4: usage_00041.pdb
#   5: usage_00105.pdb
#   6: usage_00145.pdb
#   7: usage_00162.pdb
#   8: usage_00246.pdb
#   9: usage_00289.pdb
#  10: usage_00292.pdb
#  11: usage_00312.pdb
#  12: usage_00313.pdb
#  13: usage_00320.pdb
#
# Length:        109
# Identity:       57/109 ( 52.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     69/109 ( 63.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/109 (  5.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWFQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00011.pdb         1  -IVMTQSPKSMYVSIGERVTLSCKASENVDTYVSWYQQKPEQSPKLLIYGASNRYTGVPD   59
usage_00029.pdb         1  DVVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKSGQSPKLLIHSASYRYTGVPD   60
usage_00041.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD   60
usage_00105.pdb         1  DIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPD   60
usage_00145.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD   60
usage_00162.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQIVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00246.pdb         1  DIVMTQSQKFMSTSAGDRVSITCKASQNVRTAVAWYQQKPGQSPKALIYLASNRHTGVPD   60
usage_00289.pdb         1  -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD   59
usage_00292.pdb         1  -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD   59
usage_00312.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD   60
usage_00313.pdb         1  --LMTQIPASMSISVGDRVTMNCKASQNVDSNVDWYQQKTGQSPNLLIYKASNRNTGVPD   58
usage_00320.pdb         1  DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD   60
                             vmTQ  k Ms S GdRV   CKASq V     WyQQ  gQSPklLIy AS R TGVPD

usage_00005.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYGTPLTFGAGTKLEL---  106
usage_00011.pdb        60  RFTGSGSATDFTLTISSVQAEDLADYHCGQSYNYPFTFGSGTKLEI---  105
usage_00029.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPLTFGAGTKLEL---  106
usage_00041.pdb        61  RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI---  106
usage_00105.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLEL---  106
usage_00145.pdb        61  RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI---  106
usage_00162.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYNSPQTFGGGTKLEI---  106
usage_00246.pdb        61  RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWSYPYTFGGGTKLE----  105
usage_00289.pdb        60  RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI---  105
usage_00292.pdb        60  RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI---  105
usage_00312.pdb        61  RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPWTFGGGTKLELKRT  109
usage_00313.pdb        59  RFTGSGSGTDFTFTISNMQAEDLAVYYCMQSTSYPLTFGSGTKLEI---  104
usage_00320.pdb        61  RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI---  106
                           RFT SGSgTDFT TIS  Q EDLA Y C Q    P TFG GTK E    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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