################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:13 2021 # Report_file: c_1140_92.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00015.pdb # 2: usage_00073.pdb # 3: usage_00175.pdb # 4: usage_00197.pdb # 5: usage_00572.pdb # 6: usage_00709.pdb # # Length: 103 # Identity: 5/103 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/103 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/103 ( 30.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -PMVRAHGKKVLTSFGDAVKNLDN--------IKNTFAQLSELHCDKLHVDPENFRLLGD 51 usage_00073.pdb 1 DIGVQQHADKVQRALGEAIDDLKK--------VEINFQNLSGKHQ-EIGVDTQNFKLLGQ 51 usage_00175.pdb 1 -ANVAAHGIKVLHGLDRGVKNMDN--------IAATYADLSTLHSEKLHVDPDNFKLLSD 51 usage_00197.pdb 1 -PKLKTHAMSVFVMTCEAAAQL--RKAGKVTVRDTTLKRLGATHL-KYGVGDAHFEVVKF 56 usage_00572.pdb 1 -----------LGAFSDGLAHLDN--------LKGTFATLSELHCDKLHVDPENFRLLGN 41 usage_00709.pdb 1 NPKVKAHGKKVLGAFSDGLAHLDN--------LKGTFATLSELHCDKLHVDPENFRLLGN 52 l t Ls H k Vd nF ll usage_00015.pdb 52 ILIIVLAAHFAK-EF----TPDCQAAWQKLVRVVAHALARKYH 89 usage_00073.pdb 52 TFMVELALHYKK-TF----RPKEHAAAYKFFRLVAEALS---- 85 usage_00175.pdb 52 CITIVLAAKMGH-AF----TAETQGAFQKFLAVVVSALG---- 85 usage_00197.pdb 57 ALLDTIKEEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK---- 95 usage_00572.pdb 42 VLVCVLAHHFGK-EF----TPPVQAAYQKVVAGVANALA---- 75 usage_00709.pdb 53 VLVCVLAHHFGK-EF----TPPVQAAYQKVVAGVANALA---- 86 la f A k v al #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################