################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:57 2021 # Report_file: c_1256_96.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00504.pdb # 2: usage_00983.pdb # 3: usage_01499.pdb # 4: usage_01500.pdb # 5: usage_02495.pdb # 6: usage_02496.pdb # 7: usage_02497.pdb # 8: usage_02498.pdb # 9: usage_02578.pdb # 10: usage_03817.pdb # # Length: 46 # Identity: 2/ 46 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 46 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 46 ( 39.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00504.pdb 1 PAAIL-------VGLHYLSP--DVVDRVVGAYRDALAPGSYLFT-- 35 usage_00983.pdb 1 ---------APMTRCRALN--NIPQAALGEYYEQRATAGGFLI-T- 33 usage_01499.pdb 1 ---------APLTRQRSYG--YIPQPHAILHYSQRSTNGGLLI-G- 33 usage_01500.pdb 1 ---------APLTRQRSYG--YIPQPHAILHYSQRSTNGGLLI-G- 33 usage_02495.pdb 1 -----RVVLAPMTRCRAIN--AIPNEALVEYYRQRSTAGGFLI-T- 37 usage_02496.pdb 1 -----RVVLAPLTRCRAIN--AIPNEALVEYYRQRSTAGGFLI-T- 37 usage_02497.pdb 1 -----RVVLAPLTRCRAIN--AIPNEALVEYYRQRSTAGGFLI-T- 37 usage_02498.pdb 1 -----RVVLAPLTRCRAIN--AIPNEALVEYYRQRSTAGGFLI-T- 37 usage_02578.pdb 1 -----KIVYPPTTRFRALE-DHTPSDLQLQYYGDRSTFPGTLL-IT 39 usage_03817.pdb 1 -----RVVLAPMTRCRALN--GVPNAALAEYYAQRTTPGGFLI-S- 37 tr r p Y r t gg L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################