################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:42 2021 # Report_file: c_0464_72.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00084.pdb # 2: usage_00484.pdb # 3: usage_00650.pdb # 4: usage_01055.pdb # 5: usage_01173.pdb # 6: usage_01188.pdb # 7: usage_01189.pdb # # Length: 110 # Identity: 3/110 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/110 ( 5.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/110 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 DFILVDSGPHLDAFLK-NALASANILFTPLPPATVDFHSSLKYVARLPELVKLISDEGC- 58 usage_00484.pdb 1 DFILIDCPAGLQLRASA---LSGEEAILVTNPEISCLTDTKV-G-VLKKAG--------- 46 usage_00650.pdb 1 DLVLLDAPPSLSPLTL-NALAAAEGVVVPVQAEYYALEGVAGLLATLEEVRAGL----NP 55 usage_01055.pdb 1 DFAIVDGAGSLSVITS-AAVMVSDLVIIPVTPSPLDFSAAGSVVTVLEAQAYS------- 52 usage_01173.pdb 1 DYIVIDTNPSLDVTLK-NALLCSDYVIIPMTAEKWAVESLDLFNFFVRKLN--------- 50 usage_01188.pdb 1 DLVLLDAPPSLSPLTL-NALAAAEGVVVPVQAEYYALEGVAGLLATLEEVRAGL----NP 55 usage_01189.pdb 1 DLVLLDAPPSLSPLTL-NALAAAEGVVVPVQAEYYALEGVAGLLATLEEVRAGL----NP 55 D D L p l usage_00084.pdb 59 ECQLATNIGFMSKLSN-K-ADH-KYCHSLAKEVFG---GDMLDVFLPR-- 100 usage_00484.pdb 47 -LA--ILGFILNRYG-RS-ERDI--PPEAAQDV-D---V-PLLAVIPE-- 82 usage_00650.pdb 56 RLR--LLGILVTMYDGRT-LLA-QQVEAQLRAHFG---EKVFWTVIPRNV 98 usage_01055.pdb 53 --RKVEARFLITRKIE-MATM-----LNVLKESIKDTGVKAFRTAITQ-- 92 usage_01173.pdb 51 --LFLPIFLIITRFKK-N-RTH-KTLFEILKTKD----R--FLGTISERE 89 usage_01188.pdb 56 RLR--LLGILVTMYDGRT-LLA-QQVEAQLRAHFG---EKVFWTVIPR-- 96 usage_01189.pdb 56 RLR--LLGILVTMYDGRT-LLA-QQVEAQLRAHFG---EKVFWTVIPR-- 96 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################