################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:18 2021 # Report_file: c_0085_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00009.pdb # 3: usage_00014.pdb # 4: usage_00026.pdb # 5: usage_00038.pdb # 6: usage_00046.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00077.pdb # 10: usage_00086.pdb # 11: usage_00087.pdb # 12: usage_00121.pdb # 13: usage_00134.pdb # 14: usage_00149.pdb # # Length: 116 # Identity: 29/116 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/116 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/116 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --VMTQSPASLVVSLGQRATISCRASESVDSY--GKSFMHWYQQKPGQPPKVLIYIASNL 56 usage_00009.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASSSVY-------YMYWYQQKPGSSPRLLIYDTSNL 51 usage_00014.pdb 1 DIVLTQSPASLAVSLGQRATISCKASQGVDFD--GASFMNWYQQKPGQPPKLLIFAASTL 58 usage_00026.pdb 1 EIVLTQSPGTLSVSPGERATLFCKASQGGN-------SLSWYQKRRGQPPRLLIYDTSRR 53 usage_00038.pdb 1 -IVMTQSPSSLTVTAGEKVTMSCKSSQSLFNSGKRKNFLTWYHQKPGQPPKLLIYWASTR 59 usage_00046.pdb 1 --VLTQSPAIMSASLGEEITLTCSASSSVN-------YMHWYQQKSGTSPKLLIYTTSNL 51 usage_00060.pdb 1 --VLTQSPASLAVSLGQRATISCKASQSVDYD--GDSYMNWYQQKPGQPPKLLIYAASNL 56 usage_00061.pdb 1 --VLTQSPASLAVSLGQRATMSCRAGESVDIF--GVGFLHWYQQKPGQPPKLLIYRASNL 56 usage_00077.pdb 1 DIVLTQSPASLAVSLGQRATMSCRAGESVDIF--GVGFLHWYQQKPGQPPKLLIYRASNL 58 usage_00086.pdb 1 DIVLTQSPASLAVSLGQRATISCRASESVDNY--GNSFMHWYQQKPGQPPKLLIYRASNL 58 usage_00087.pdb 1 --VLTQSPASLAVSLGQRATISCRASESVDNY--GNSFMHWYQQKPGQPPKLLIYRASNL 56 usage_00121.pdb 1 --VLTQSPPSLAVSLGQRATISCRASESIDLY--GFTFMHWYQQKPGQPPKILIYRASNL 56 usage_00134.pdb 1 DIVLTQSPASLAVSLGQRATISCKASQGVDFD--GASFMNWYQQKPGQPPKLLIFAASTL 58 usage_00149.pdb 1 --VLTQSPVSLAVSLGQRATISCRASKSVSTS--GYSYMHWYQQKPGQPPRLLLYLGSNL 56 V TQSP s G T C a WYqqk G P Li S usage_00002.pdb 57 ESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNEDPPTFGAGTKLEM-RRA 111 usage_00009.pdb 52 ASGVPVRFSGSGSGTSYSLTISRMEAEDAATYYCQQWSSYPPITFGVGTKLEL--- 104 usage_00014.pdb 59 ESGIPARFSGRGSGTDFTLNIHPVEEEDAATYYCQQSHEDPLTFGAGTKLEL---- 110 usage_00026.pdb 54 ASGIPDRFVGSGSGTDFSLTITKVDRDDFALYFCQQF----EFFGLGTALEI---- 101 usage_00038.pdb 60 ESGVPDRFSGSGSGTDFTLTITSVQAEDLAIYYCQNDYSHPLTFGAGTKLEL---- 111 usage_00046.pdb 52 ASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSSYPTFGGGTKLEI----- 102 usage_00060.pdb 57 ESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPRTFGGGTKLEI-KRA 111 usage_00061.pdb 57 ESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEI---- 108 usage_00077.pdb 59 ESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEI---- 110 usage_00086.pdb 59 ESGIPVRFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPRTFGGGTKLEI---- 110 usage_00087.pdb 57 ESGIPVRFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPRTFGGGTKLEI---- 108 usage_00121.pdb 57 ESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQTHEDPYTFGGGTKLEI-KRA 111 usage_00134.pdb 59 ESGIPARFSGRGSGTDFTLNIHPVEEEDAATYYCQQSHEDPLTFGAGTKLEL---- 110 usage_00149.pdb 57 ESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCQHIRELTRSFGGGTKLEI---- 108 SG P RFsG GS T L I v D A YyCq g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################