################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:21 2021 # Report_file: c_1049_19.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00068.pdb # 2: usage_00115.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00273.pdb # 6: usage_00288.pdb # 7: usage_00323.pdb # 8: usage_00324.pdb # 9: usage_00325.pdb # 10: usage_00326.pdb # 11: usage_00346.pdb # 12: usage_00348.pdb # 13: usage_00349.pdb # 14: usage_00470.pdb # 15: usage_00471.pdb # 16: usage_00514.pdb # 17: usage_00515.pdb # # Length: 37 # Identity: 13/ 37 ( 35.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 37 ( 62.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 37 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 --LKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQ- 34 usage_00115.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00116.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00117.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00273.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00288.pdb 1 -TLKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00323.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00324.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00325.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00326.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00346.pdb 1 -MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQE 36 usage_00348.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00349.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00470.pdb 1 AVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQ- 36 usage_00471.pdb 1 AVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQ- 36 usage_00514.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 usage_00515.pdb 1 -TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE 36 LKI SwNV GlRa K l w ee pDIlClQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################