################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:50 2021 # Report_file: c_1148_367.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00474.pdb # 2: usage_01856.pdb # 3: usage_01857.pdb # 4: usage_01858.pdb # 5: usage_01859.pdb # 6: usage_01860.pdb # 7: usage_01861.pdb # 8: usage_01862.pdb # 9: usage_01863.pdb # # Length: 33 # Identity: 4/ 33 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 33 ( 72.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 33 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00474.pdb 1 PTLEIPAGATVDVTFINTNKGFGHSFDI----- 28 usage_01856.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01857.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01858.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01859.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01860.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01861.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYITA 29 usage_01862.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 usage_01863.pdb 1 GEWDND-L-GSIMTIGAVN--DNGEFDGTYIT- 28 gewdnd l gsimTigavN dngeFDg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################