################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:17 2021 # Report_file: c_0001_9.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00017.pdb # 8: usage_00028.pdb # 9: usage_00029.pdb # 10: usage_00054.pdb # 11: usage_00055.pdb # 12: usage_00063.pdb # 13: usage_00064.pdb # 14: usage_00096.pdb # # Length: 178 # Identity: 138/178 ( 77.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 138/178 ( 77.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/178 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00002.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00003.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00004.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00006.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00007.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00017.pdb 1 GVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEIS 60 usage_00028.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00029.pdb 1 ---------FDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 51 usage_00054.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00055.pdb 1 GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 60 usage_00063.pdb 1 ---------FDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 51 usage_00064.pdb 1 ---------FDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEIS 51 usage_00096.pdb 1 GVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEIS 60 FDLRG LTHGRD IDTNVIIEG V LG RV IGTGCV KN VIGDD EIS usage_00001.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00002.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00003.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00004.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00006.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00007.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00017.pdb 61 PYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLGDA 120 usage_00028.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00029.pdb 52 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 111 usage_00054.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00055.pdb 61 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 120 usage_00063.pdb 52 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 111 usage_00064.pdb 52 PYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDA 111 usage_00096.pdb 61 PYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLGDA 120 PYTV EDA L A CT GPFARLRPGAEL EGAHVGNFVE KKARLGKGSKAGHL YLGDA usage_00001.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00002.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00003.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00004.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00006.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00007.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00017.pdb 121 EIGAGVNIGAGTITCNYD--NKFKTIIGDDVFVGSDTQLVAPVTVANGATIG------ 170 usage_00028.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00029.pdb 112 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVT 169 usage_00054.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00055.pdb 121 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIA------ 172 usage_00063.pdb 112 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVT 169 usage_00064.pdb 112 EIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVT 169 usage_00096.pdb 121 EIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIG------ 172 EIG VNIGAGTITCNYD NKFKTIIGDDVFVGSDTQLVAPVTV GATI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################