################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:16 2021 # Report_file: c_0918_10.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00089.pdb # 4: usage_00090.pdb # 5: usage_00163.pdb # 6: usage_00333.pdb # # Length: 50 # Identity: 1/ 50 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 50 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 50 ( 64.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 FI-TQLLP---VKRKLGFYEWT-SRLRSHINPTGTVLLQ-LEN------- 37 usage_00041.pdb 1 HL-CLMSPVKPFYQCACPTG---VKLL------------EN--GKTCK-- 30 usage_00089.pdb 1 FI-TQLLP---VKRKLGFYEWT-SRLRSHINPTGTVLLQ-LEN-----TM 39 usage_00090.pdb 1 FI-TQLLP---VKRKLGFYEWT-SRLRSHINPTGTVLLQ-LEN-----TM 39 usage_00163.pdb 1 GTWLVNLL---TGERFA---AEAETLCTSLPPYGFVLYA-IEH-----W- 37 usage_00333.pdb 1 FI-TQLLP---VKRKLGFYEWT-SRLRSHINPTGTVLLQ-LEN-----TM 39 lp L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################