################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:21 2021 # Report_file: c_1240_34.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00290.pdb # 2: usage_01200.pdb # 3: usage_01201.pdb # 4: usage_01202.pdb # 5: usage_01203.pdb # 6: usage_01204.pdb # 7: usage_01369.pdb # 8: usage_01989.pdb # 9: usage_02047.pdb # 10: usage_02048.pdb # 11: usage_02049.pdb # 12: usage_02050.pdb # # Length: 48 # Identity: 3/ 48 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 48 ( 39.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 48 ( 52.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00290.pdb 1 MVILATES------SVDQ----SKAGAVYVH-SLLGIQPFARSFEMKE 37 usage_01200.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_01201.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_01202.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_01203.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_01204.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_01369.pdb 1 MVILATES--------D-----SKAGAVYVH-SLLGIQPFARSFEMKE 34 usage_01989.pdb 1 HCV-TAEDDIKSVSLLGNVLMA--QHAAEHDA--------AETIQLRD 37 usage_02047.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_02048.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_02049.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 usage_02050.pdb 1 MVIVATES------AVDA----AKAAAVQIH-NLLGIQPFARCFEMKE 37 mvi atEs d a Av h Ar femke #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################