################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:17 2021 # Report_file: c_0194_86.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00001.pdb # 2: usage_00131.pdb # 3: usage_00201.pdb # # Length: 180 # Identity: 5/180 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/180 ( 41.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/180 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -EKALRWMREAADEYGLVTVTE-VM------------DTRHVELVAKYS----DILQIGA 42 usage_00131.pdb 1 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVIS-- 58 usage_00201.pdb 1 --EMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVT-- 56 e l ae e Glk rg a g gle l s v usage_00001.pdb 43 RNSQNFELLKEVGKVENPVLLKRGMGNTIQE-LLYSAEYIMAQGNENVILCERGIRTFET 101 usage_00131.pdb 59 E-IVTPADIEVALDYVDVIQIG--ARN---MQNFELLKAAGRV---DKPILLKRGLS--- 106 usage_00201.pdb 57 E-ALGEDDLPKVAEYADIIQIG--ARN---AQNFRLLSKAGSY---NKPVLLKRGFM--- 104 e dl v y d iqig arN nf ll ag nkp llkrg usage_00001.pdb 102 ATRFTLDI-------SAVPVVKELSHLPIIVDPSH--PAGRRSL----VIPLAKAAYAIG 148 usage_00131.pdb 107 --------ATIEEFIGAAEYIMSQGNGKIILCER-GIRTYEKATRNTLDISAVPILKKE- 156 usage_00201.pdb 105 --------NTIEEFLLSAEYIANSGNTKIILCER-GIRTFEKATRNTLDISAVPIIRKE- 154 aaeyi gn kIIlcer rt ekat dIsavpi ke #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################