################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:34 2021 # Report_file: c_1489_130.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00246.pdb # 2: usage_00478.pdb # 3: usage_00508.pdb # 4: usage_01083.pdb # 5: usage_02196.pdb # 6: usage_03227.pdb # 7: usage_03416.pdb # 8: usage_03417.pdb # 9: usage_03418.pdb # 10: usage_03764.pdb # 11: usage_04363.pdb # 12: usage_04364.pdb # 13: usage_04365.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 71 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 71 ( 83.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00246.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILG------------- 34 usage_00478.pdb 1 VPVLVR-LSEFYQEAGFAL-------------PHDAAIRAFKALLGK------------- 33 usage_00508.pdb 1 -----D-IAATLEHLR---DQRPGM--VQTKEQFEFALTAVAEEVNAILAH--------- 40 usage_01083.pdb 1 -----------------------------TGLLRHILQQVYNHSVT-----DPEKLNNYE 26 usage_02196.pdb 1 -----GWALMMRSLGM---HTA-QLPT-VSIDAATSLLDELAAN---------------- 34 usage_03227.pdb 1 -------VFSLIREMR---TQRPSL--VQTQEQYELVYNAVLELFKR------------- 35 usage_03416.pdb 1 -------VLGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAIL-------------- 34 usage_03417.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILG------------- 34 usage_03418.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILGK------------ 35 usage_03764.pdb 1 -------IFNCVRELR---AQRVNL--VQTEEQYVFVHDAILEACL-------------- 34 usage_04363.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILG------------- 34 usage_04364.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILGK------------ 35 usage_04365.pdb 1 --------LGFLKHIR---TQRNYL--VQTEEQYIFIHDALLEAILGK------------ 35 usage_00246.pdb ----------- usage_00478.pdb ----------- usage_00508.pdb ----------- usage_01083.pdb 27 PFSPEVYGETS 37 usage_02196.pdb ----------- usage_03227.pdb ----------- usage_03416.pdb ----------- usage_03417.pdb ----------- usage_03418.pdb ----------- usage_03764.pdb ----------- usage_04363.pdb ----------- usage_04364.pdb ----------- usage_04365.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################