################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:26 2021 # Report_file: c_0406_32.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00347.pdb # 2: usage_00348.pdb # 3: usage_00349.pdb # 4: usage_00350.pdb # # Length: 87 # Identity: 65/ 87 ( 74.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 87 ( 77.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 87 ( 23.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00347.pdb 1 SS-LMISQGTFVTVVCSYSDKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETI 59 usage_00348.pdb 1 --SSLISQGTFVTVVCSYSDKHDLYN-VRLEKDGSTF-EKSTEPYKTEDEFEIGPVNETI 56 usage_00349.pdb 1 --SSLISQGTFVTVVCSYSDKHDLYN-VRLEKDGSTF-EKSTEPYKTEDEFEIGPVNETI 56 usage_00350.pdb 1 --SSLISQGTFVTVVCSYSDKHDLYN-VRLEKDGSTF-EKSTEPYKTEDEFEIGPVNETI 56 slISQGTFVTVVCSYSDKHDLYN VRLEKDGSTF EKSTEPYKTEDEFEIGPVNETI usage_00347.pdb 60 TGHYSCIYSKGITWSERSKTLELKVIK 86 usage_00348.pdb 57 TGHYSCIYSK----SERSKTLELK--- 76 usage_00349.pdb 57 TGHYSCIYSK---WSERSKTLELKVIK 80 usage_00350.pdb 57 TGHYSCIYSKGITWSE----------- 72 TGHYSCIYSK SE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################