################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:17 2021 # Report_file: c_1492_91.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00144.pdb # 2: usage_00145.pdb # 3: usage_00176.pdb # 4: usage_00510.pdb # 5: usage_01116.pdb # 6: usage_01639.pdb # 7: usage_02106.pdb # 8: usage_02108.pdb # 9: usage_02162.pdb # 10: usage_02552.pdb # # Length: 45 # Identity: 33/ 45 ( 73.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 45 ( 73.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 45 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 -EKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLP 44 usage_00145.pdb 1 PEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLL- 44 usage_00176.pdb 1 -EKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRL-- 42 usage_00510.pdb 1 --KKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLP 43 usage_01116.pdb 1 ---KATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRL-- 40 usage_01639.pdb 1 -EKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLL- 43 usage_02106.pdb 1 ---KATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLL- 41 usage_02108.pdb 1 --KKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRL-- 41 usage_02162.pdb 1 ---KATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLL- 41 usage_02552.pdb 1 ----------VLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLP 35 VLGFLALIVGSLFGPFQALNYGNVDAYPLLKRL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################