################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:53 2021 # Report_file: c_1197_56.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00400.pdb # 2: usage_00440.pdb # 3: usage_00685.pdb # 4: usage_01142.pdb # 5: usage_01235.pdb # 6: usage_01377.pdb # # Length: 35 # Identity: 7/ 35 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 35 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 35 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00400.pdb 1 HRK---FDIRSWVLVD-HLYNIYLYREGVLRTSSE 31 usage_00440.pdb 1 HRK---FDIRSWVLVD-HLYNIYLYREGVLRTSSE 31 usage_00685.pdb 1 HRK---FDIRSWVLVD-HLYNIYLYREGVLRTSSE 31 usage_01142.pdb 1 --K---FDIRSWVLVD-HLYNIYLYREGVLRTSSE 29 usage_01235.pdb 1 ---KQTLSCYSEVWVVPWLQHFEV---PVLRCHHH 29 usage_01377.pdb 1 --K---FDIRSWVLVD-HLYNIYLYREGVLRTSSE 29 fdirSwVlVd hLyniyl gVLRtsse #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################