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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:12:10 2021
# Report_file: c_1409_22.html
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#====================================
# Aligned_structures: 9
#   1: usage_00224.pdb
#   2: usage_00481.pdb
#   3: usage_00502.pdb
#   4: usage_00503.pdb
#   5: usage_00605.pdb
#   6: usage_00660.pdb
#   7: usage_00663.pdb
#   8: usage_01443.pdb
#   9: usage_01462.pdb
#
# Length:         67
# Identity:       15/ 67 ( 22.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/ 67 ( 23.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/ 67 ( 26.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00224.pdb         1  HVRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRL   60
usage_00481.pdb         1  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAI----------   50
usage_00502.pdb         1  -FRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM   59
usage_00503.pdb         1  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM   60
usage_00605.pdb         1  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVADAIVVVENVERVM   60
usage_00660.pdb         1  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM   60
usage_00663.pdb         1  NFRATLIPTIAVPVVLLGTFGVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM   60
usage_01443.pdb         1  HVRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRL   60
usage_01462.pdb         1  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM   60
                             R  L   I  P  L   F V    G   N     G   A G  Vd AI          

usage_00224.pdb        61  EEWQHQH   67
usage_00481.pdb            -------     
usage_00502.pdb        60  AE-----   61
usage_00503.pdb        61  AEEG---   64
usage_00605.pdb        61  AEEG---   64
usage_00660.pdb        61  AEEG---   64
usage_00663.pdb        61  AEE----   63
usage_01443.pdb        61  EEWQHQ-   66
usage_01462.pdb        61  AE-----   62
                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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