################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:04 2021 # Report_file: c_0496_7.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00080.pdb # 6: usage_00081.pdb # 7: usage_00083.pdb # 8: usage_00084.pdb # 9: usage_00112.pdb # 10: usage_00113.pdb # 11: usage_00121.pdb # 12: usage_00122.pdb # 13: usage_00128.pdb # # Length: 90 # Identity: 10/ 90 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 90 ( 28.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 90 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 TMYGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00077.pdb 1 TMYGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00078.pdb 1 TMYGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00079.pdb 1 TMYGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00080.pdb 1 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00081.pdb 1 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00083.pdb 1 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00084.pdb 1 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD-YAVEIFYYAVKRE 59 usage_00112.pdb 1 TVYGVTKVYTELLGTWYRQKYGVDFRSVRLPGIISAATLPGGGATD-YAIHMYHSALLQK 59 usage_00113.pdb 1 TVYGVTKVYTELLGTWYRQKYGVDFRSVRLPGIISAATLPGGGATD-YAIHMYHSALLQK 59 usage_00121.pdb 1 TVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPPGGGTTD-YAVDIFHAAVTGE 59 usage_00122.pdb 1 TVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPPGGGTTD-YAVDIFHAAVTGE 59 usage_00128.pdb 1 --YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE--------NYINRFFRQAFHGE 50 G K E Y G d rs R pg is Ya A usage_00076.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYE- 88 usage_00077.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYEA 89 usage_00078.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYE- 88 usage_00079.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYEA 89 usage_00080.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYE- 88 usage_00081.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYEA 89 usage_00083.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYE- 88 usage_00084.pdb 60 KYKCYLAPNRALPMMYMPDALKALVDLYEA 89 usage_00112.pdb 60 KCVCPVLPYESLPMMYMPDTLNSLVKIMEA 89 usage_00113.pdb 60 KCVCPVLPYESLPMMYMPDTLNSLVKIMEA 89 usage_00121.pdb 60 PYTCFLKEDEALPMMYMPDAIRATIELMEA 89 usage_00122.pdb 60 PYTCFLKEDEALPMMYMPDAIRATIELMEA 89 usage_00128.pdb 51 QLTLHANSVAKREFLYAKDAAKSVIYALKQ 80 c lpmmYmpD e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################