################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:54 2021 # Report_file: c_1076_157.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00508.pdb # 2: usage_00781.pdb # 3: usage_00852.pdb # 4: usage_01097.pdb # 5: usage_01098.pdb # 6: usage_01099.pdb # # Length: 79 # Identity: 2/ 79 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 79 ( 12.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 79 ( 49.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00508.pdb 1 PFEKISREAPYHFIATGGHISYVELPDMKN-------------NLKG----LEAVWDYAA 43 usage_00781.pdb 1 ----LPHMKKQ-------GFGRIINIA---SAHGLVASANKSAYVAAKHGVVGFTKVTAL 46 usage_00852.pdb 1 ----MRAMMKK-------RFGRIITIG---S--------GQVNYAAAKAGVIGFSKSLAR 38 usage_01097.pdb 1 -----LPQRER-------GSGSVVNIS---SFGGQLSFAGFSAYSATKAALEQLSEGLAD 45 usage_01098.pdb 1 -----LPQRER-------GSGSVVNIS---SFGGQLSFAGFSAYSATKAALEQLSEGLAD 45 usage_01099.pdb 1 -----LPQRER-------GSGSVVNIS---SFGGQLSFAGFSAYSATKAALEQLSEGLAD 45 g i y a A usage_00508.pdb 44 QHL---DYFGVNMPVD-KC 58 usage_00781.pdb 47 ETAGQGITANAICP-G--- 61 usage_00852.pdb 39 EVASRGITVNVVAP-G--- 53 usage_01097.pdb 46 EVAPFGIKVLIVEP-G--- 60 usage_01098.pdb 46 EVAPFGIKVLIVEP-GA-- 61 usage_01099.pdb 46 EVAPFGIKVLIVEP-G--- 60 e a i P g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################