################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:49 2021 # Report_file: c_0526_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00003.pdb # 2: usage_00021.pdb # 3: usage_00083.pdb # 4: usage_00084.pdb # 5: usage_00156.pdb # 6: usage_00157.pdb # 7: usage_00175.pdb # 8: usage_00176.pdb # # Length: 108 # Identity: 66/108 ( 61.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/108 ( 61.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/108 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --IKEKIQEDFGSFNNFKNEFSNVLCGHFGSGWGWLVLNNNNKLVILQTHDAGNPIKDNT 58 usage_00021.pdb 1 GEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPIKDNT 60 usage_00083.pdb 1 -EIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPIKDNT 59 usage_00084.pdb 1 -EIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPIKDNT 59 usage_00156.pdb 1 --IRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKDDGTADIVQTHDAGSPLKENL 58 usage_00157.pdb 1 --IRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKDDGTADIVQTHDAGSPLKENL 58 usage_00175.pdb 1 -EIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNKNNKLVILQTHDAGNPIKENT 59 usage_00176.pdb 1 GEIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNKNNKLVILQTHDAGNPIKENT 60 I KI E FGSF FK FSN L GHFGSGWGWL L I QTHDAG P K N usage_00003.pdb 59 GIPILTCDIWEHAYYIDYRNDRPSYVKAWWNLVNWNFANENLKKALQ- 105 usage_00021.pdb 61 GIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKKAMQK 108 usage_00083.pdb 60 GIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKKAMK- 106 usage_00084.pdb 60 GIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKKAM-- 105 usage_00156.pdb 59 GRPLLCCDVWEHAYYIDYKNDRLSYINSWWNLVNWDFANKNLEA---- 102 usage_00157.pdb 59 GRPLLCCDVWEHAYYIDYKNDRLSYINSWWNLVNWDFANKNLEA---- 102 usage_00175.pdb 60 GIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKNALN- 106 usage_00176.pdb 61 GIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKNALN- 107 G P L CD WEHAYYIDY NDR SY WWNLVNW FAN NL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################