################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:37 2021 # Report_file: c_0756_41.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00022.pdb # 2: usage_00101.pdb # 3: usage_00131.pdb # 4: usage_00141.pdb # # Length: 66 # Identity: 9/ 66 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 66 ( 31.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 66 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 TILKLQHNNLTDTA--WLLNYPGLVDVDLSYNQLEKITY-QHFVKMQRLERLYVSN-NRL 56 usage_00101.pdb 1 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP-GLLTPTPKLEKLSLAN-NQL 58 usage_00131.pdb 1 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 60 usage_00141.pdb 1 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF 60 Ldls N L l w l L l L gN tl lf L L N usage_00022.pdb 57 VALDF- 61 usage_00101.pdb 59 TELPAG 64 usage_00131.pdb 61 TKIQ-- 64 usage_00141.pdb 61 SEIR-- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################