################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:09:11 2021 # Report_file: c_0481_2.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00013.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00107.pdb # 14: usage_00108.pdb # # Length: 92 # Identity: 32/ 92 ( 34.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 92 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 92 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 KYHFKTNQGIKNLESQLAEEIAGKNPDFHIEDLHNAIENQEFPSWTLSVQIIPYADALTM 60 usage_00009.pdb 1 KYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTY 60 usage_00010.pdb 1 KYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTY 60 usage_00013.pdb 1 KYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTY 60 usage_00062.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00063.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00064.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00065.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00066.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00067.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00105.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00106.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00107.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 usage_00108.pdb 1 KYHFKTRQGWDCFTDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENY 60 KYHF QG eA k AGeNaD r DL I gd P Wd Q P e y usage_00008.pdb 61 KETLFDVTKTVSQKEYPLIEVGTMTL------ 86 usage_00009.pdb 61 RFNPFDLTKTISQKDYPRIKVGTLTL------ 86 usage_00010.pdb 61 RFNPFDLTKTISQKDYPRIKVGTLTL------ 86 usage_00013.pdb 61 RFNPFDLTKTISQKDYPRIKVGTLTL------ 86 usage_00062.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00063.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFILN----- 87 usage_00064.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00065.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00066.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00067.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFILNRNPRN 92 usage_00105.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00106.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00107.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 usage_00108.pdb 61 RWNPFDLTKTWSQKDYPLIPVGYFIL------ 86 r npFDlTKT SQKdYP I VG L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################