################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:35 2021 # Report_file: c_1492_162.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00411.pdb # 2: usage_00545.pdb # 3: usage_00548.pdb # 4: usage_00798.pdb # 5: usage_00826.pdb # 6: usage_00827.pdb # 7: usage_01324.pdb # 8: usage_01326.pdb # 9: usage_01643.pdb # 10: usage_01701.pdb # 11: usage_02065.pdb # 12: usage_02410.pdb # 13: usage_02413.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 60 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 60 ( 76.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00411.pdb 1 -------SDEFEPQII-PQTKASTKSA-------------TSSEVVVEFLKELAKKGS-- 37 usage_00545.pdb 1 DEQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQKLEQLNQYP---- 37 usage_00548.pdb 1 ---ILRAIRFEQRFDFR---------IE----------ETTERLLKQAVEEG-------- 30 usage_00798.pdb 1 ---LAEVYRMLEAG-E-I--------Q-------------DGPSSLTLWQARGELTRR-G 33 usage_00826.pdb 1 -KPDEQGLQQILQLLK-E--------SQ----------SPDTTIQRTVQQK--------- 31 usage_00827.pdb 1 -KPDEQGLQQILQLLK-E--------SQ----------SPDTTIQRTVQ----------- 29 usage_01324.pdb 1 DEQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQ------------- 28 usage_01326.pdb 1 -EQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQKLEQLNQYP---- 36 usage_01643.pdb 1 ------DSVMLKHQ---C--------SCGDNSRHPEHAGRIQSIWSRLQERG-------- 35 usage_01701.pdb 1 --------AGMRLL----NL------T-------------SPEATARVLEAVTQTLTQYP 29 usage_02065.pdb 1 -EQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQKLEQLNQYP---- 36 usage_02410.pdb 1 -EQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQKLEQLNQY----- 35 usage_02413.pdb 1 DEQGLQQILQLLKESQ-S--------PD----------TTIQRTVQQKLEQL-------- 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################