################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:33 2021 # Report_file: c_1332_59.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00053.pdb # 7: usage_00168.pdb # 8: usage_00169.pdb # 9: usage_00170.pdb # 10: usage_00171.pdb # 11: usage_00179.pdb # 12: usage_00180.pdb # 13: usage_00181.pdb # 14: usage_00182.pdb # 15: usage_00183.pdb # 16: usage_00184.pdb # 17: usage_00841.pdb # 18: usage_00842.pdb # 19: usage_00869.pdb # 20: usage_00914.pdb # 21: usage_00932.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 75 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 75 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00018.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00020.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00021.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00022.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00053.pdb 1 DQEDLKFHEKVIEGYQEIIHNESQ--RFKS--VNADQ--------------PLENVVEDT 42 usage_00168.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00169.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00170.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00171.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00179.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------RIEAVHEEI 38 usage_00180.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00181.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00182.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00183.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00184.pdb 1 ---NGAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 39 usage_00841.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00842.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00869.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 usage_00914.pdb 1 -----------GPEAVRAL-------NVFYYLTYEGAVNLNSITDPVLREAVEAQIRSF- 41 usage_00932.pdb 1 ----GAFQERALRCFHQLMKDT--TLNWKM--VDASK--------------SIEAVHEDI 38 n k v a e v e usage_00017.pdb 39 RVLSEDAIATATEK- 52 usage_00018.pdb 39 RVLSEDAIATATEKP 53 usage_00020.pdb 39 RVLSEDAIATAT--- 50 usage_00021.pdb 39 RVLSEDAIATATEK- 52 usage_00022.pdb 39 RVLSEDAIATATEKP 53 usage_00053.pdb 43 YQTIIKYLEK----- 52 usage_00168.pdb 39 RVLSEDAIATATEK- 52 usage_00169.pdb 39 RVLSEDAIATATEK- 52 usage_00170.pdb 39 RVLSEDAIA------ 47 usage_00171.pdb 39 RVLSEDAIA------ 47 usage_00179.pdb 39 RVLSEDAIRT----- 48 usage_00180.pdb 39 RVLSEDAIATATEK- 52 usage_00181.pdb 39 RVLSEDAIATATEK- 52 usage_00182.pdb 39 RVLSEDAIATATEK- 52 usage_00183.pdb 39 RVLSEDAIATATEK- 52 usage_00184.pdb 40 RVLSEDAIA------ 48 usage_00841.pdb 39 RVLSEDAIATATEK- 52 usage_00842.pdb 39 RVLSEDAIATATEK- 52 usage_00869.pdb 39 RVLSEDAIATATEKP 53 usage_00914.pdb --------------- usage_00932.pdb 39 RVLSEDAIRTATEKP 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################