################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:20 2021 # Report_file: c_1387_114.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00457.pdb # 2: usage_00459.pdb # 3: usage_00481.pdb # 4: usage_00482.pdb # 5: usage_00527.pdb # 6: usage_00528.pdb # 7: usage_00563.pdb # 8: usage_00564.pdb # 9: usage_00575.pdb # 10: usage_00576.pdb # 11: usage_02325.pdb # 12: usage_02326.pdb # 13: usage_02438.pdb # 14: usage_02529.pdb # 15: usage_02530.pdb # # Length: 66 # Identity: 52/ 66 ( 78.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 66 ( 78.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 66 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00457.pdb 1 -LKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQ 59 usage_00459.pdb 1 -LKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQ 59 usage_00481.pdb 1 ALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 60 usage_00482.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_00527.pdb 1 ALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 60 usage_00528.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_00563.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_00564.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_00575.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_00576.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_02325.pdb 1 ALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 60 usage_02326.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_02438.pdb 1 ALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 60 usage_02529.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 usage_02530.pdb 1 -LKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQ 59 LKTT QLSK W EELLQ VCAGLAEEL L PDAPGGMV FR TLTLSFFFKFYLTVLQ usage_00457.pdb 60 KLGQEN 65 usage_00459.pdb 60 KLGQEN 65 usage_00481.pdb 61 KLGRAD 66 usage_00482.pdb 60 KLG--- 62 usage_00527.pdb 61 KLGRAD 66 usage_00528.pdb 60 KLGRAD 65 usage_00563.pdb 60 KLGRA- 64 usage_00564.pdb 60 KLGRAD 65 usage_00575.pdb 60 KLGRAD 65 usage_00576.pdb 60 KL---- 61 usage_02325.pdb 61 KLGRAD 66 usage_02326.pdb 60 KLGRAD 65 usage_02438.pdb 61 KLGRAD 66 usage_02529.pdb 60 KLGRAD 65 usage_02530.pdb 60 KLGRAD 65 KL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################