################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:56 2021 # Report_file: c_1035_7.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00111.pdb # 4: usage_00112.pdb # 5: usage_00113.pdb # 6: usage_00165.pdb # 7: usage_00180.pdb # 8: usage_00197.pdb # 9: usage_00198.pdb # 10: usage_00199.pdb # 11: usage_00200.pdb # 12: usage_00237.pdb # 13: usage_00260.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 61 ( 49.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 61 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00109.pdb 1 --PTTTIGSFPQTKD-IRINRNKFA-GQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 55 usage_00111.pdb 1 --PTTTIGSFP-K-D-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 54 usage_00112.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00113.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00165.pdb 1 LFPTTTIGSFPQTPE-VRK-RSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVH- 57 usage_00180.pdb 1 -KLVVIDSL-------TSTFRNEYTGRG-KLAERQQKLGRHMATLNKLADLFNCVV--LV 49 usage_00197.pdb 1 --PTTTIGSFP----QIRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 53 usage_00198.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00199.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00200.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 usage_00237.pdb 1 --PTTTIGSFP-----IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 52 usage_00260.pdb 1 --PTTTIGSFPQTKD-IRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVH- 56 ptttigs r Rnk g eEyeafi i t qeeigldV h usage_00108.pdb - usage_00109.pdb - usage_00111.pdb - usage_00112.pdb - usage_00113.pdb - usage_00165.pdb - usage_00180.pdb 50 T 50 usage_00197.pdb - usage_00198.pdb - usage_00199.pdb - usage_00200.pdb - usage_00237.pdb - usage_00260.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################