################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:04 2021 # Report_file: c_1012_41.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00039.pdb # 2: usage_00042.pdb # 3: usage_00071.pdb # 4: usage_00104.pdb # 5: usage_00115.pdb # 6: usage_00125.pdb # 7: usage_00223.pdb # 8: usage_00259.pdb # 9: usage_00313.pdb # 10: usage_00314.pdb # 11: usage_00328.pdb # 12: usage_00496.pdb # 13: usage_00527.pdb # 14: usage_00571.pdb # 15: usage_00625.pdb # # Length: 70 # Identity: 9/ 70 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 70 ( 32.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 70 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-RIHKIA---TI-T-AAVTTCFWK-------DH 46 usage_00042.pdb 1 RLRNIGIAAHIDAGKTTTTERILYYTG-RIHK--RGITI-T-AAVTTCFWK-------DH 48 usage_00071.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-R------------IAAVTTCFWK-------DH 39 usage_00104.pdb 1 ---NIGIAAHIDAGKTTTTERILYYTG-RI-------------AVTTCFWK-------DH 36 usage_00115.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-RI------------AAVTTCFWK-------DH 39 usage_00125.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-RI-------------AVTTCFWK-------DH 38 usage_00223.pdb 1 -RRTFAIISHPDAGKTTITEKVLLFGQT--------------TSVMQFPYH-------DC 38 usage_00259.pdb 1 ---NIGIAAHIDAGKTTTTERILYYTG-RI------------AAVTTCFWK-------DH 37 usage_00313.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-RI-------------AVTTCFWK-------DH 38 usage_00314.pdb 1 RLRNIGIAAHIDAGKTTTTERILYYTG-RI-------------AVTTCFWK-------DH 39 usage_00328.pdb 1 -TRNIGIMAHIDAGKTTTTERILYYTG-R-------------SAATTAAWE-------GH 38 usage_00496.pdb 1 ---NIGICAHVDAGKTTTTERVLFYTG-VNHK-------L--SAAVTTFWKGSRGQYDNY 47 usage_00527.pdb 1 LYRNIGIAAHVDAGKTTTTERVLYYTG-MSH---------T-SAATTCYWSGMDKQFESH 49 usage_00571.pdb 1 -LRNIGIAAHIDAGKTTTTERILYYTG-RI-------------AVTTCFWK-------DH 38 usage_00625.pdb 1 RYRNIGICA-----KTTTTERILFYTG-LSH---------T-SAATTTFWRGMEAQFQDH 44 nigI a KTTtTEr L ytg a t w usage_00039.pdb 47 RINIID---- 52 usage_00042.pdb 49 RINIIDAPG- 57 usage_00071.pdb 40 RINIID---- 45 usage_00104.pdb 37 RINIIDTPGH 46 usage_00115.pdb 40 RINIID---- 45 usage_00125.pdb 39 RINIID---- 44 usage_00223.pdb 39 LVNLLDTPGH 48 usage_00259.pdb 38 RINIID---- 43 usage_00313.pdb 39 RINIIDTPGH 48 usage_00314.pdb 40 RINIIDTPGH 49 usage_00328.pdb 39 RVNIID---- 44 usage_00496.pdb 48 RVNVIDTPGH 57 usage_00527.pdb 50 RINIIDTP-- 57 usage_00571.pdb 39 RINIID---- 44 usage_00625.pdb 45 RVNIIDTP-- 52 r N iD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################