################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:34:13 2021 # Report_file: c_0534_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00018.pdb # 11: usage_00019.pdb # 12: usage_00020.pdb # 13: usage_00021.pdb # 14: usage_00026.pdb # 15: usage_00027.pdb # 16: usage_00090.pdb # # Length: 94 # Identity: 53/ 94 ( 56.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 94 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 94 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 YVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPGLVSGELIGCFGL 60 usage_00002.pdb 1 YVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPGLVSGELIGCFGL 60 usage_00003.pdb 1 YVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPGLVSGELIGCFGL 60 usage_00004.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00005.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00006.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00007.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00008.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00009.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00018.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00019.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00020.pdb 1 SVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGL 60 usage_00021.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00026.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00027.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 usage_00090.pdb 1 YVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGL 60 yV YGL AREvER DSGYRSmMSVQSSLVM PI GSd Q KYLP L GE iGCFGL usage_00001.pdb 61 TEPD-----PAGMKTRAEKI--DGGYRLSGSKMW 87 usage_00002.pdb 61 TEP---------MKTRAEKI--DGGYRLSGSKMW 83 usage_00003.pdb 61 TEPDA---GSAGMKTRAEKI--DGGYRLSGSKMW 89 usage_00004.pdb 61 TEPD-----PGSMVTRARKV--PGGYSLSGSKMW 87 usage_00005.pdb 61 TEPN-----HGSMVTRARKV--PGGYSLSGSKMW 87 usage_00006.pdb 61 TEP--------SMVTRARKV--PGGYSLSGSKMW 84 usage_00007.pdb 61 TEPN-----PGSMVTRARKV--PGGYSLSGSKMW 87 usage_00008.pdb 61 TEPN------GSMVTRARKV--PGGYSLSGSKMW 86 usage_00009.pdb 61 TEPP------GSMVTRARKV--PGGYSLSGSKMW 86 usage_00018.pdb 61 TEP---------MVTRARKV--PGGYSLSGSKMW 83 usage_00019.pdb 61 TEP---------MVTRARKV--PGGYSLSGSKMW 83 usage_00020.pdb 61 TEPNSGSD-PSSMETRAHYNSSNKSYTLNGTKTW 93 usage_00021.pdb 61 TEPP------GSMVTRARKV--PGGYSLSGSKMW 86 usage_00026.pdb 61 TEPN-------SMVTRARKV--PGGYSLSGSKMW 85 usage_00027.pdb 61 TEPN-----PGSMVTRARKV--PGGYSLSGSKMW 87 usage_00090.pdb 61 TEP---------MVTRARKV--PGGYSLSGSKMW 83 TEP M TRA k ggY LsGsKmW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################