################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:45 2021 # Report_file: c_0464_54.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00646.pdb # 2: usage_00647.pdb # 3: usage_00723.pdb # 4: usage_00841.pdb # 5: usage_00862.pdb # # Length: 85 # Identity: 38/ 85 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 85 ( 64.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 85 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00646.pdb 1 PHETLIV-AHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVES 59 usage_00647.pdb 1 PHETLIV-AHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVES 59 usage_00723.pdb 1 EFEVRVASAHRTPELVEEIVKNS---KADVFIAIAGLAAHLPGVVASLTTKPVIAVPVDA 57 usage_00841.pdb 1 PAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPL 60 usage_00862.pdb 1 PYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQS 60 p E v AHRTP ya a gl ViIAgAGgAAHLPGm Aa T lPV gVPV usage_00646.pdb 60 RALKGMDSLLSIVQMPGGVPVGTLA 84 usage_00647.pdb 60 RALKGMDSLLSIVQMPGGVPVGTLA 84 usage_00723.pdb 58 -KLDGLDALLSSVQMPPGIPVATVG 81 usage_00841.pdb 61 GRLDGLDSLLSIVQMPAGVPVATVS 85 usage_00862.pdb 61 KALNGLDSLLSIVQMPGGVPVATVA 85 L G DsLLSiVQMP GvPV T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################