################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:38:44 2021 # Report_file: c_0780_20.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00068.pdb # 2: usage_00188.pdb # 3: usage_00221.pdb # 4: usage_00222.pdb # 5: usage_00223.pdb # 6: usage_00224.pdb # 7: usage_00225.pdb # 8: usage_00226.pdb # 9: usage_00227.pdb # 10: usage_00228.pdb # 11: usage_00229.pdb # 12: usage_00230.pdb # 13: usage_00231.pdb # 14: usage_00243.pdb # 15: usage_00311.pdb # 16: usage_00361.pdb # 17: usage_00382.pdb # 18: usage_00556.pdb # 19: usage_00606.pdb # 20: usage_00641.pdb # 21: usage_00780.pdb # # Length: 80 # Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 80 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 80 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 LSILVGGAGFT-GVEFLGELT---DRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSE-E 55 usage_00188.pdb 1 ERLLVMGGGII-GLEMGTVYH---ALG-------------SQIDVVEMFDQVIPAADK-D 42 usage_00221.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00222.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00223.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00224.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00225.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00226.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00227.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00228.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00229.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00230.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00231.pdb 1 KRLLVIGGGAV-GLELGQVYR---RLG-------------AEVTLIEYMPEILPQGDP-E 42 usage_00243.pdb 1 DSLAVIGGRAL-ALEFAQMYS---RMK-------------VEVAILQRSPVLIPDWEP-E 42 usage_00311.pdb 1 KSIIIAGAGAI-GMEFGYVLK---NYG-------------VDVTIVEFLPRALPNEDA-D 42 usage_00361.pdb 1 KSIIIAGAGAI-GMEFGYVLK---NYG-------------VDVTIVEFLPRALPNEDA-D 42 usage_00382.pdb 1 KTVLVIADLGGC---PPHMFYKSAAEK-------------YNLVSFIPRP---------F 35 usage_00556.pdb 1 GKLGVIGAGVI-GLELGSVWA---RLG-------------AEVTVLEAMDKFLPAVDE-Q 42 usage_00606.pdb 1 -RITVIGAGYI-GAELAEAYS---TTG-------------HDVTLIDAMARVMPKYFDAD 42 usage_00641.pdb 1 EDVTIIGGGAI-GLEMAETFV---ELG-------------KKVRMIERNDHIGTIYDG-D 42 usage_00780.pdb 1 KRLGVIGAGVI-GLELGSVWA---RLG-------------AEVTVLEALDTFLMAADT-A 42 g usage_00068.pdb 56 L-VNHAVSYLEDRGVEFKIA 74 usage_00188.pdb 43 I-VKVFTKRISKKFNLMLE- 60 usage_00221.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00222.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00223.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00224.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00225.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00226.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00227.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00228.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00229.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00230.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00231.pdb 43 T-AALLRRALEKEGIRVRTK 61 usage_00243.pdb 43 A-SVEARRIMENDGVAVVTG 61 usage_00311.pdb 43 V-SKEIEKQFKKLGVTILTA 61 usage_00361.pdb 43 V-SKEIEKQFKKLGVTILTA 61 usage_00382.pdb 36 AITASHAALIEKYSVAVIKD 55 usage_00556.pdb 43 V-AKEAQKILTKQGLKILLG 61 usage_00606.pdb 43 F-TDVIEQDYRDHGVQLALG 61 usage_00641.pdb 43 M-AEYIYKEADKHHIEILTN 61 usage_00780.pdb 43 V-SKEAQKTLTKQGLDIKLG 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################