################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:34 2021 # Report_file: c_0089_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00009.pdb # 2: usage_00020.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00040.pdb # 8: usage_00063.pdb # # Length: 212 # Identity: 49/212 ( 23.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/212 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/212 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 EQYAVCLAFMIDGDIKVGVLGCPNFE-------------------G--GLIVAAQKGCGA 39 usage_00020.pdb 1 EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGH-----E-S-FGYIFRAVRGLGA 53 usage_00036.pdb 1 EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGH-----E-S-FGYIFRAVRGLGA 53 usage_00037.pdb 1 EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGH-----E-S-FGYIFRAVRGLGA 53 usage_00038.pdb 1 EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGH-----E-S-FGYIFRAVRGLGA 53 usage_00039.pdb 1 EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGH-----E-S-FGYIFRAVRGLGA 53 usage_00040.pdb 1 EQYAVCLAFMIDGDIKVGVLGCPNFE-------------------G--GLIVAAQKGCGA 39 usage_00063.pdb 1 DQYAVALGLLEEGKVVLGVLACPNLPLA-SIAGN----NKNKSSSDEIGCLFFATIGSGT 55 eQ AVcLa dG G gCPN G i A G Ga usage_00009.pdb 40 KMFSVNDIKNGKDIHVSTTPKTSDMCFCESVEVSHTDQ-SRSKTITERLQVTKPPVRMDS 98 usage_00020.pdb 54 FYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSH-DEQTAIKNKLNISK-SLHLDS 111 usage_00036.pdb 54 FYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSH-DEQTAIKNKLNISK-SLHLDS 111 usage_00037.pdb 54 FYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSH-DEQTAIKNKLNISK-SLHLDS 111 usage_00038.pdb 54 FYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSH-DEQTAIKNKLNISK-SLHLDS 111 usage_00039.pdb 54 FYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSH-DEQTAIKNKLNISK-SLHLDS 111 usage_00040.pdb 40 KMFSVNDIKNGKDIHVSTTPKTSDMCFCESVEVSHTDQ-SRSKTITERLQVTKPPVRMDS 98 usage_00063.pdb 56 YMQLLDSKSSPVKVQVSSVENPEEASFFESFEGAHSLHDLSSSIA-NKLGVKAPPVRIDS 114 d ihV t dm E vE H i L k DS usage_00009.pdb 99 QCKYMAIASGRADVYLRLPRNLSYQEKIWDHAAGYLIVKEAGGKVTDI-YGNDLDFSLGR 157 usage_00020.pdb 112 QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGR 171 usage_00036.pdb 112 QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGR 171 usage_00037.pdb 112 QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGR 171 usage_00038.pdb 112 QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGR 171 usage_00039.pdb 112 QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGR 171 usage_00040.pdb 99 QCKYMAIASGRADVYLRLPRNLSYQEKIWDHAAGYLIVKEAGGKVTDI-YGNDLDFSLGR 157 usage_00063.pdb 115 QAKYGALSRGDGAIYLRFPHKGY-REKIWDHVAGAIVVTEAGGIVTDA-AGKPLDFSKGK 172 Q KY a G advYLRlP ls qEKIWDHaAG iV EAGG TD LDF Gr usage_00009.pdb 158 TLCNNHGIVASNGIL---H------------- 173 usage_00020.pdb 172 TLA-TKGVIASSGPRELHDLVVSTSCDVIQSR 202 usage_00036.pdb 172 TLA-TKGVIASSGPRELHDLVVSTSCDVIQS- 201 usage_00037.pdb 172 TLA-TKGVIASSGPRELHDLVVSTSCDVIQSR 202 usage_00038.pdb 172 TLA-TKGVIASSGPRELHDLVVSTSCDVIQSR 202 usage_00039.pdb 172 TLA-TKGVIASSGPRELHDLVVSTSCDVIQSR 202 usage_00040.pdb 158 TLCNNHGIVASNGIL---H------------- 173 usage_00063.pdb 173 YLDLDTGIIVANEKL---MPLLLKAVRD---- 197 tL G as g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################