################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:06 2021 # Report_file: c_1337_41.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00057.pdb # 4: usage_00306.pdb # 5: usage_00354.pdb # 6: usage_00663.pdb # 7: usage_00664.pdb # 8: usage_00665.pdb # 9: usage_00666.pdb # 10: usage_00667.pdb # 11: usage_00762.pdb # 12: usage_00921.pdb # 13: usage_00922.pdb # # Length: 49 # Identity: 21/ 49 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 49 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 49 ( 6.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 LPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQGIVNY--- 46 usage_00010.pdb 1 LPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQGIVNYLS- 48 usage_00057.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00306.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00354.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYFT- 48 usage_00663.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYFTL 49 usage_00664.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00665.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00666.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00667.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00762.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYF-- 47 usage_00921.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYFT- 48 usage_00922.pdb 1 LNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYFT- 48 L I G IP V TPS VGSHVTG NM GI Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################