################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:30 2021 # Report_file: c_0653_89.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00235.pdb # 2: usage_00269.pdb # 3: usage_00498.pdb # 4: usage_00627.pdb # 5: usage_00687.pdb # 6: usage_00688.pdb # 7: usage_00689.pdb # 8: usage_00690.pdb # 9: usage_00691.pdb # 10: usage_00991.pdb # 11: usage_01579.pdb # # Length: 89 # Identity: 61/ 89 ( 68.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 89 ( 69.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 89 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00235.pdb 1 -DILPNETHMFPHGPNAVRQLAFIGFTTADGGLMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00269.pdb 1 -------THMFPHGPNAVRQLAFIGFTTADGGLMMGHFDSKMTFNGSRAIEIPGPHFVTI 53 usage_00498.pdb 1 -DILPSETHMFPHGPNAVRQLAFIGFTTADGGLMMGHLDSKMTFNGSRAIEIPGPHFVTI 59 usage_00627.pdb 1 VDILPNETHMFPHGPNAVRQLAFIGFTTADGGLMMGHFDSKMTFNGSRAIEIPGPHFVTI 60 usage_00687.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00688.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00689.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00690.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00691.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 usage_00991.pdb 1 VDILPNETHMFPHGPNAVRQLAFIGFTTADGGLMMGHFDSKMTFNGSRAIEIPGPHFVTI 60 usage_01579.pdb 1 -DILPSETHMFPHGPNAVRQTATIGFTTADGGKMMGHFDSKMTFNGSRAIEIPGPHFVTI 59 THMFPHGPNAVRQ A IGFTTADGG MMGHfDSKMTFNGSRAIEIPGPHFVTI usage_00235.pdb 60 ITKQMRDTSDKRDHVCQREV--------- 79 usage_00269.pdb 54 ITKQMRDTSDKRDHVCQREVAYA------ 76 usage_00498.pdb 60 ITKQMRDTSDKRDHVCQREVAHAHSVP-- 86 usage_00627.pdb 61 ITKQMRDTSDKRDHVCQREVAYA------ 83 usage_00687.pdb 60 ITKQT-------DHVCQREVAYA------ 75 usage_00688.pdb 60 ITKQT-------DHVCQREVAYAHSVPRI 81 usage_00689.pdb 60 ITKQTD----KRDHVCQREVAYA------ 78 usage_00690.pdb 60 ITKQT-------DHVCQREVAYA------ 75 usage_00691.pdb 60 ITKQTR-----RDHVCQREVAYA------ 77 usage_00991.pdb 61 ITKQMRDTSDKRDHVCQREVAYAHSVPRI 89 usage_01579.pdb 60 ITKQTRDTSDKRDHVCQREVAYA------ 82 ITKQ DHVCQREV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################