################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:53 2021 # Report_file: c_1392_36.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00226.pdb # 2: usage_00531.pdb # 3: usage_00833.pdb # 4: usage_00834.pdb # 5: usage_00842.pdb # # Length: 81 # Identity: 0/ 81 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 81 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/ 81 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00226.pdb 1 GMYYTGAGM-----------------------NPARSFAPAILTRNFT-NHWVYWV---- 32 usage_00531.pdb 1 ---------IPALIGKLD--LEADSTRE-KTYNMLKFNA----------NWEAFSNHGEF 38 usage_00833.pdb 1 ---------IEGMIAGIK--AAAPGFRE-WTFNMLTKNY----------TWELFSNHGAV 38 usage_00834.pdb 1 ---------IEGMIAGIK--AAAPGFRE-WTFNMLTKNY----------TWELFSNHGAV 38 usage_00842.pdb 1 -------------FTSTVLIVVAKASGRITWGQLAKNWL---------NVYFGNLV---- 34 n usage_00226.pdb 33 ------GPVIGAGLGSLLYD- 46 usage_00531.pdb 39 DDTHANSLEAVHDDIHGFVGR 59 usage_00833.pdb 39 VGAHANSLEMVHNTVHFLI-- 57 usage_00834.pdb 39 VGAHANSLEMVHNTVHFLIG- 58 usage_00842.pdb 35 ------GALLFVLLMWLSG-- 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################