################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:27 2021 # Report_file: c_1117_12.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00100.pdb # 4: usage_00102.pdb # 5: usage_00104.pdb # 6: usage_00105.pdb # 7: usage_00355.pdb # 8: usage_00393.pdb # 9: usage_00429.pdb # 10: usage_00553.pdb # 11: usage_00570.pdb # 12: usage_00871.pdb # 13: usage_00882.pdb # 14: usage_00961.pdb # # Length: 121 # Identity: 108/121 ( 89.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/121 ( 89.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/121 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00005.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00100.pdb 1 -------------VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 47 usage_00102.pdb 1 -------------VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 47 usage_00104.pdb 1 DQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 60 usage_00105.pdb 1 DQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 60 usage_00355.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00393.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00429.pdb 1 -------------VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 47 usage_00553.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00570.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00871.pdb 1 -------------VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 47 usage_00882.pdb 1 -QIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 59 usage_00961.pdb 1 -------------VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL 47 VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFL usage_00004.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00005.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00100.pdb 48 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 107 usage_00102.pdb 48 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 107 usage_00104.pdb 61 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 120 usage_00105.pdb 61 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 120 usage_00355.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00393.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00429.pdb 48 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 107 usage_00553.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00570.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00871.pdb 48 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 107 usage_00882.pdb 60 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 119 usage_00961.pdb 48 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN 107 LLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIIN usage_00004.pdb 120 M 120 usage_00005.pdb 120 M 120 usage_00100.pdb 108 M 108 usage_00102.pdb 108 M 108 usage_00104.pdb 121 M 121 usage_00105.pdb 121 M 121 usage_00355.pdb 120 M 120 usage_00393.pdb 120 M 120 usage_00429.pdb 108 M 108 usage_00553.pdb 120 M 120 usage_00570.pdb 120 M 120 usage_00871.pdb 108 M 108 usage_00882.pdb 120 M 120 usage_00961.pdb 108 M 108 M #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################