################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:24 2021 # Report_file: c_0886_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00141.pdb # 2: usage_00411.pdb # 3: usage_00510.pdb # 4: usage_00511.pdb # 5: usage_00529.pdb # 6: usage_00556.pdb # 7: usage_00559.pdb # 8: usage_00560.pdb # 9: usage_00561.pdb # 10: usage_00563.pdb # 11: usage_00564.pdb # 12: usage_00646.pdb # # Length: 112 # Identity: 94/112 ( 83.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/112 ( 84.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/112 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 usage_00411.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00510.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00511.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 usage_00529.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 usage_00556.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 usage_00559.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00560.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00561.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00563.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 usage_00564.pdb 1 SDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 60 usage_00646.pdb 1 -DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK 59 DEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQK usage_00141.pdb 60 LCKIHQPENPQHFAELLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLEEIW 111 usage_00411.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIW 112 usage_00510.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEI- 111 usage_00511.pdb 60 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSW----RKFTPLLCEIW 107 usage_00529.pdb 60 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIW 111 usage_00556.pdb 60 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIW 111 usage_00559.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSW--------------- 97 usage_00560.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMS---------------- 96 usage_00561.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSW--------------- 97 usage_00563.pdb 60 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSW--------------- 96 usage_00564.pdb 61 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMS---------------- 96 usage_00646.pdb 60 LCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEI- 110 LCKIHQPENPQHFAcLLGRLTELRTFNHHHAEMLMS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################