################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:27 2021 # Report_file: c_1141_6.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00246.pdb # 2: usage_00247.pdb # 3: usage_00248.pdb # 4: usage_00249.pdb # 5: usage_00250.pdb # 6: usage_00251.pdb # 7: usage_00252.pdb # 8: usage_00253.pdb # 9: usage_00254.pdb # 10: usage_00255.pdb # # Length: 134 # Identity: 116/134 ( 86.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/134 ( 86.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/134 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00246.pdb 1 RLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 60 usage_00247.pdb 1 RLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 60 usage_00248.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00249.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00250.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00251.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00252.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00253.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00254.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 usage_00255.pdb 1 -LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL 59 LEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARL usage_00246.pdb 61 DYYSGRGDGDEFSMDRYEKSEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 120 usage_00247.pdb 61 DYYSGRGDGDEFSMDRYEKSEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 120 usage_00248.pdb 60 DYYSG-------------AAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 106 usage_00249.pdb 60 DYYSGS---------RYAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 110 usage_00250.pdb 60 DYYSGR----------YAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 109 usage_00251.pdb 60 DYYSGR-------MDRYAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 112 usage_00252.pdb 60 DYYSGRGDGDEFSMDRYAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 119 usage_00253.pdb 60 DYYSGR-------MDRYAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 112 usage_00254.pdb 60 DYYSGR---------RYAAAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 110 usage_00255.pdb 60 DYYSGR------------AAEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG 107 DYYSG EMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRG usage_00246.pdb 121 FAIKHIQDMRAFEA 134 usage_00247.pdb 121 FAIKHIQDMRAF-- 132 usage_00248.pdb 107 FAIKHIQDMRAF-- 118 usage_00249.pdb 111 FAIKHIQDMRAFE- 123 usage_00250.pdb 110 FAIKHIQDMRAFE- 122 usage_00251.pdb 113 FAIKHIQDMRAFEA 126 usage_00252.pdb 120 FAIKHIQDMRAFEA 133 usage_00253.pdb 113 FAIKHIQDMRAFEA 126 usage_00254.pdb 111 FAIKHIQDMRAFEA 124 usage_00255.pdb 108 FAIKHIQDMRAFEA 121 FAIKHIQDMRAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################