################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:44 2021 # Report_file: c_1159_235.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00969.pdb # 2: usage_01226.pdb # 3: usage_01407.pdb # 4: usage_01692.pdb # 5: usage_01693.pdb # # Length: 37 # Identity: 0/ 37 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 37 ( 10.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 37 ( 45.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00969.pdb 1 -TGVMAGDDD-SR-SIAIISK-D----NEQFSRGV-- 27 usage_01226.pdb 1 -AGVI--D--ED-YRGEIKVILFNHS-NEIFNGRK-- 28 usage_01407.pdb 1 DQVLIVDN-----PLRKIYFK-G---DKYLFFYT-DS 27 usage_01692.pdb 1 -SAVLSPD--KK-MHGLLVKK-N----HEYEINHVD- 27 usage_01693.pdb 1 -SAVLSPD--KK-MHGLLVKK-N----HEYEINHVD- 27 v d k e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################