################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:41 2021 # Report_file: c_1052_61.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00029.pdb # 2: usage_00047.pdb # 3: usage_00060.pdb # 4: usage_00069.pdb # 5: usage_00215.pdb # 6: usage_00291.pdb # 7: usage_00365.pdb # 8: usage_00484.pdb # # Length: 85 # Identity: 14/ 85 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 85 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 85 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 -----VVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVPTEA 55 usage_00047.pdb 1 -----IIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEA 55 usage_00060.pdb 1 NRHPPIVVHCSAGVGRTGVLILSELMIYCLEHN---EKVEVPMMLRLLREQRMFMIQTIA 57 usage_00069.pdb 1 -----IVVHCSAGVGRTGCFIVIDAMLERIKTE---KTVDVYGHVTLMRSQRNYMVQTED 52 usage_00215.pdb 1 -----TVVHCSAGVGRTGTFIALDRILQQLDSK---DSVDIYGAVHDLRLHRVHMVQTEC 52 usage_00291.pdb 1 -----MVVHCSAGVGRTGCFIVIDAMLERMKHE---KTVDIYGHVTCMRSQRNYMVQTED 52 usage_00365.pdb 1 -----IVVHSSAGVGRTGTYIGIDA-LEGLEAE---NKVDVYGYVVKLRRQRCL-VQVEA 50 usage_00484.pdb 1 -----IVVHCSAGAGRTGCFIAIDTMLDMAENE---GVVDIFNCVRELRAQRVNLVQTEE 52 vVH SAG GRTG I d d R qR vqte usage_00029.pdb 56 QYRFIYMAVQHYIETLQRRIEEEQK 80 usage_00047.pdb 56 QYKFIYVAIAQFIETTKKK------ 74 usage_00060.pdb 58 QYKFVYQVLIQFLQNS--------- 73 usage_00069.pdb 53 QYGFIHEALLEAVGC---------- 67 usage_00215.pdb 53 QYVYLHQCVRDVLRARKL------- 70 usage_00291.pdb 53 QYVFIHEALLEAAT----------- 66 usage_00365.pdb 51 QYILIHQALVEYNQ----------- 64 usage_00484.pdb 53 QYVFVHDAILEACLC---------- 67 QY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################