################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:16 2021 # Report_file: c_0286_10.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00061.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # 9: usage_00069.pdb # 10: usage_00070.pdb # 11: usage_00113.pdb # 12: usage_00114.pdb # # Length: 99 # Identity: 42/ 99 ( 42.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 99 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 99 ( 30.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 -------------------P------QV-RETRIPFDLTGKAIVLVDDVLYTGRTARAAL 34 usage_00057.pdb 1 -------------------P------QV-RETRIPFDLTGKAIVLVDDVLYTGRTARAAL 34 usage_00058.pdb 1 -------------------P------QV-RETRIPFDLTGKAIVLVDDVLYTGRTARAAL 34 usage_00059.pdb 1 -------------------P------QV-RETRIPFDLTGKAIVLVDDVLYTGRTARAAL 34 usage_00060.pdb 1 ----------------DHEP------LV-KGTNVPFPVTERNVILVDDVLFTGRTVRAAM 37 usage_00061.pdb 1 ----------------DHEP------LV-KGTNVPFPVTERNVILVDDVLFTGRTVRAAM 37 usage_00067.pdb 1 ---P------------VGELDITLYRLV-KGTDIPVDITDKKVILVDDVLYTGRTVRAAM 44 usage_00068.pdb 1 ---P------------VGELDITLY----KGTDIPVDITDKKVILVDDVLYTGRTVRAAM 41 usage_00069.pdb 1 ---P------------VGELDITLYR--DKGTDIPVDITDKKVILVDDVLYTGRTVRAAM 43 usage_00070.pdb 1 APVPVGEIDITLYRDDDDEP------LV-KGTNVPFPVTERNVILVDDVLFTGRTVRAGM 53 usage_00113.pdb 1 ----------------NDEP------LV-KGADIPVDITDQKVILVDDVLYTGRTVRAGM 37 usage_00114.pdb 1 ----------------NDEP------LV-KGADIPVDITDQKVILVDDVLYTGRTVRAGM 37 P T LVDDVL TGRT RA usage_00056.pdb 35 DALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVP-- 71 usage_00057.pdb 35 DALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVP-- 71 usage_00058.pdb 35 DALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVP-- 71 usage_00059.pdb 35 DALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVP-- 71 usage_00060.pdb 38 DAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTS 76 usage_00061.pdb 38 DAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTS 76 usage_00067.pdb 45 DALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVP-- 81 usage_00068.pdb 42 DALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVP-- 78 usage_00069.pdb 44 DALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVPTS 82 usage_00070.pdb 54 DAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVP-- 90 usage_00113.pdb 38 DALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTS 76 usage_00114.pdb 38 DALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIP-- 74 DA D GRP I LAVLVDRGHRELPIRAD GKN P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################