################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:29:03 2021 # Report_file: c_1389_30.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00001.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00096.pdb # 6: usage_00119.pdb # 7: usage_00122.pdb # 8: usage_00123.pdb # 9: usage_00124.pdb # 10: usage_00125.pdb # 11: usage_00129.pdb # 12: usage_00131.pdb # 13: usage_00166.pdb # 14: usage_00180.pdb # 15: usage_00187.pdb # 16: usage_00188.pdb # 17: usage_00189.pdb # 18: usage_00190.pdb # 19: usage_00191.pdb # 20: usage_00192.pdb # 21: usage_00193.pdb # 22: usage_00197.pdb # 23: usage_00198.pdb # 24: usage_00238.pdb # 25: usage_00245.pdb # 26: usage_00283.pdb # 27: usage_00284.pdb # 28: usage_00346.pdb # 29: usage_00347.pdb # 30: usage_00348.pdb # 31: usage_00349.pdb # 32: usage_00350.pdb # 33: usage_00351.pdb # 34: usage_00352.pdb # 35: usage_00353.pdb # 36: usage_00354.pdb # 37: usage_00380.pdb # 38: usage_00449.pdb # 39: usage_00450.pdb # 40: usage_00451.pdb # 41: usage_00465.pdb # 42: usage_00466.pdb # 43: usage_00467.pdb # 44: usage_00482.pdb # 45: usage_00483.pdb # 46: usage_00493.pdb # # Length: 45 # Identity: 13/ 45 ( 28.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 45 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 45 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SEETLMEYLENPKKYIPGTKMIFAGIKKKSEREDLIKYLKQATSS 45 usage_00034.pdb 1 TEEVFREYIRDPKAKIPGTKMIFAGVKDEQKVSDLIAYIKQFN-- 43 usage_00035.pdb 1 -EETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 44 usage_00036.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00096.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00119.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00122.pdb 1 -NDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 41 usage_00123.pdb 1 NNDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 42 usage_00124.pdb 1 -NDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 41 usage_00125.pdb 1 NNDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 42 usage_00129.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKA--- 42 usage_00131.pdb 1 TEEVFREYIRDPKAKIPGTKMIFAGVKDEQKVSDLIAYIKQFN-- 43 usage_00166.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 usage_00180.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_00187.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00188.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00189.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00190.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00191.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00192.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00193.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00197.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00198.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKA--- 42 usage_00238.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATN- 44 usage_00245.pdb 1 NNDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSA--- 42 usage_00283.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 usage_00284.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 usage_00346.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 usage_00347.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 45 usage_00348.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00349.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00350.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00351.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00352.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00353.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00354.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00380.pdb 1 TPEVLDVYLENPKKFMPGTKMSFAGIKKPQERADVIAYLE----- 40 usage_00449.pdb 1 GEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKA--- 42 usage_00450.pdb 1 -EDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKA--- 41 usage_00451.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_00465.pdb 1 GEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 45 usage_00466.pdb 1 GEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 45 usage_00467.pdb 1 -EDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE 44 usage_00482.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE 45 usage_00483.pdb 1 KEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKA--- 42 usage_00493.pdb 1 TPEVLDVYLENPKKFMPGTKMSFAGIKKPQERADVIAYLET---- 41 Y PK PGTKM F G K D aY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################