################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:38 2021 # Report_file: c_0235_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00005.pdb # 2: usage_00008.pdb # 3: usage_00014.pdb # 4: usage_00024.pdb # 5: usage_00029.pdb # 6: usage_00035.pdb # 7: usage_00076.pdb # 8: usage_00077.pdb # # Length: 122 # Identity: 8/122 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/122 ( 18.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/122 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 KKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKL-----PLGN-ATQVQHLSDLLNMS 53 usage_00008.pdb 1 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE---FQAEF-VSTPELAAQS 56 usage_00014.pdb 1 KKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKL-----PLGN-ATQVQHLSDLLNMS 53 usage_00024.pdb 1 EKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-----G-P--WRFTNSLEEALREA 51 usage_00029.pdb 1 KKLGIIGYGHIGTQLGILAESLG--YVYFYDIENKL-----PLGN-ATQVQHLSDLLN-S 51 usage_00035.pdb 1 RRAGVLGLGRIGFEVARRLAGFDM-QISYSDIAPKS-----YAPD-WTFVEDAVTLARDV 53 usage_00076.pdb 1 KKLGIIGYGHIGTQLGILAESLG--YVYFYDIENKL-----PLGN-ATQVQHLSDLLN-S 51 usage_00077.pdb 1 KKLGIIGYGHIGTQLGILAESLG--YVYFYDIENKL-----PLGN-ATQVQHLSDLLN-S 51 g G G IG g k l usage_00005.pdb 54 DVVSLHVPEN--PSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAA 111 usage_00008.pdb 57 DFIVVACSLT--PATEGLCNKDFFQK-KETAVFINISRGDVVNQDDLYQALASGKIAAAG 113 usage_00014.pdb 54 DVVSLHVPEN--PSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAA 111 usage_00024.pdb 52 RAAVCALPLN--KHTRGLVKYQHLAL-AEDAVFVNVGRAEVLDRDGVLRILKERPQFIFA 108 usage_00029.pdb 52 DVVSLHVPEN--PSTKN--GAKEISL-KPGSLLINASRGTVVDIPALADALASKHLAGAA 106 usage_00035.pdb 54 DFLFVTLAASAATRH--IVGRDVIEALGPEGMLINISRASNIDEEALIAALADGRLGSAA 111 usage_00076.pdb 52 DVVSLHVPEN--PSTKN--GAKEISL-KPGSLLINASRGTVVDIPALCDALASKHLAGAA 106 usage_00077.pdb 52 DVVSLHVPEN--PSTKN--GAKEISL-KPGSLLINASRGTVVDIPALCDALASKHLAGAA 106 d t iN sR v d l aLa aa usage_00005.pdb 112 ID 113 usage_00008.pdb 114 LD 115 usage_00014.pdb 112 ID 113 usage_00024.pdb 109 SD 110 usage_00029.pdb 107 ID 108 usage_00035.pdb 112 LD 113 usage_00076.pdb 107 ID 108 usage_00077.pdb 107 ID 108 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################