################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:56 2021 # Report_file: c_1256_355.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00503.pdb # 2: usage_02168.pdb # 3: usage_02169.pdb # 4: usage_02829.pdb # 5: usage_03378.pdb # 6: usage_03490.pdb # 7: usage_03491.pdb # 8: usage_03499.pdb # 9: usage_03781.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 30 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 30 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00503.pdb 1 LQASIFTNDFPRAFGIAEQL-E-VGTVHIN 28 usage_02168.pdb 1 LSAYVHTQSFANINQAISDL-E-VGEVYIN 28 usage_02169.pdb 1 LSAYVHTQSFANINQAISDL-E-VGEVYIN 28 usage_02829.pdb 1 -PLVQHITNKVHQNFGANVTLALGSSPIM- 28 usage_03378.pdb 1 LTGAVITRNRAHIEQAKREF-H-VGNLYFN 28 usage_03490.pdb 1 LAAAVFTKDLDKANYLSQAL-Q-AGTVWVN 28 usage_03491.pdb 1 LAAAVFTKDLDKANYLSQAL-Q-AGTVWVN 28 usage_03499.pdb 1 LQASIFTKDTDRAINIGKHL-E-VGTVHIN 28 usage_03781.pdb 1 LQASIFTNDFPRAFGIAEQL-E-VGTVHIN 28 t g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################