################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:18:23 2021 # Report_file: c_0361_2.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00014.pdb # 11: usage_00015.pdb # 12: usage_00016.pdb # 13: usage_00017.pdb # 14: usage_00018.pdb # 15: usage_00019.pdb # 16: usage_00020.pdb # 17: usage_00021.pdb # 18: usage_00022.pdb # 19: usage_00023.pdb # 20: usage_00024.pdb # 21: usage_00025.pdb # 22: usage_00030.pdb # 23: usage_00031.pdb # 24: usage_00032.pdb # 25: usage_00033.pdb # 26: usage_00037.pdb # # Length: 124 # Identity: 79/124 ( 63.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/124 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/124 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ----RWFLDKLVDEIGVGYVRDEGSVSNYILSEIKPLRNFLTQLQPFLKLKQKQANLVLK 56 usage_00005.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00006.pdb 1 ----RWFLDKLVDEIGVGYVRDEGSVSNYILSEIKPLRNFLTQLQPFLKLKQKQANLVLK 56 usage_00007.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00008.pdb 1 ----RWFLDKLVDEIGVGYVSDSGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00010.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSQYVLSEIAPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00011.pdb 1 ----RWFLDKLVDEIGVGYVYDSGSVSDYRLSEIKPLHNFLTQLQPFLKLKQKQANLVLA 56 usage_00012.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSDYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00013.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00014.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00015.pdb 1 KTQRRWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 60 usage_00016.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00017.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00018.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00019.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00020.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00021.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00022.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00023.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSDYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00024.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSDYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00025.pdb 1 ----RWFLDKLVDEIGVGYVRDRGSVSDYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00030.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSQYVLSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00031.pdb 1 ----RWFLDKLVDEIGVGYVYDSGSVSDYRLSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00032.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSQYVLSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00033.pdb 1 ----RWFLDKLVDEIGVGYVYDSGSVSDYRLSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 usage_00037.pdb 1 ----RWFLDKLVDEIGVGYVRDSGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQANLVLK 56 RWFLDKLVDEIGVGYV D GSVS Y LSEIkPL NFLTQLQPFLKLKQKQANLVLk usage_00004.pdb 57 ITEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00005.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00006.pdb 57 ITEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00007.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00008.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00010.pdb 57 IIEQLPSAKASPAAFLEVCTWVDQIAALNDSATRKT--TSETVAAVL----------D-- 102 usage_00011.pdb 57 IIEQLPSAKASPDAFLEVCTWVDQIAALNDSKTRAT--TSATVRAAL----------D-- 102 usage_00012.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLD--------S----- 103 usage_00013.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAV-------------- 100 usage_00014.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00015.pdb 61 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 106 usage_00016.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAV-------------- 100 usage_00017.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00018.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00019.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00020.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00021.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00022.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL------------- 101 usage_00023.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00024.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00025.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00030.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRA--SNKEFLLYLAG-F 111 usage_00031.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 usage_00032.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVLSNKEFLLYLAG-F 113 usage_00033.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------DS- 103 usage_00037.pdb 57 IIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKT--TSETVRAVL----------D-- 102 I EQLPSAK SPd FLEVCTWVDQIAALNDSkTRkT ts tv a usage_00004.pdb ---- usage_00005.pdb ---- usage_00006.pdb ---- usage_00007.pdb ---- usage_00008.pdb ---- usage_00010.pdb ---- usage_00011.pdb ---- usage_00012.pdb ---- usage_00013.pdb ---- usage_00014.pdb ---- usage_00015.pdb ---- usage_00016.pdb ---- usage_00017.pdb ---- usage_00018.pdb ---- usage_00019.pdb ---- usage_00020.pdb ---- usage_00021.pdb ---- usage_00022.pdb ---- usage_00023.pdb ---- usage_00024.pdb ---- usage_00025.pdb ---- usage_00030.pdb 112 VDSD 115 usage_00031.pdb ---- usage_00032.pdb 114 VDS- 116 usage_00033.pdb ---- usage_00037.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################