################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:31 2021 # Report_file: c_0974_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01007.pdb # 2: usage_01008.pdb # 3: usage_01009.pdb # 4: usage_01010.pdb # 5: usage_01011.pdb # 6: usage_01212.pdb # 7: usage_01213.pdb # 8: usage_01214.pdb # # Length: 88 # Identity: 57/ 88 ( 64.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 88 ( 64.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 88 ( 35.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01007.pdb 1 --QPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 58 usage_01008.pdb 1 DWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 60 usage_01009.pdb 1 ----EVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 56 usage_01010.pdb 1 -WQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 59 usage_01011.pdb 1 --QPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 58 usage_01212.pdb 1 -----VKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 55 usage_01213.pdb 1 -WQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 59 usage_01214.pdb 1 -------LDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM 53 LDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQM usage_01007.pdb 59 AHCLGAYCPNILFPYARECITSMVSRGT 86 usage_01008.pdb 61 AHCL------------------------ 64 usage_01009.pdb 57 AHCLGAYCPNILFPYARECITSMVSRG- 83 usage_01010.pdb 60 AHCLGAYCPNILFPYARECITSMVSRG- 86 usage_01011.pdb 59 AHCLGAYCPNILFPYARECITSMVSRGT 86 usage_01212.pdb 56 AHCLGAYCPNILFPYARECITSMVSRGT 83 usage_01213.pdb 60 AHCLGAYCPNILFPYARECITSMVSRG- 86 usage_01214.pdb 54 AHCLGAYCPNILFPYARECITSMVSRGT 81 AHCL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################