################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:53 2021 # Report_file: c_0277_8.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00011.pdb # 3: usage_00016.pdb # 4: usage_00022.pdb # 5: usage_00029.pdb # 6: usage_00209.pdb # 7: usage_00228.pdb # 8: usage_00255.pdb # 9: usage_00261.pdb # # Length: 105 # Identity: 16/105 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/105 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/105 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASK-TI-S-----KYLAWYQQKPGKAPKLLIYS--- 50 usage_00011.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQ-SV-S-----SYLAWYQQKPGQAPRLLIYD--- 49 usage_00016.pdb 1 --VLTQSPAIMSASPGEKVTMTCSVSS-SV-------NYMHWYQQKSSTSPKLWIYD--- 47 usage_00022.pdb 1 -LVMTQTPLSLPVSLGDQASISCRSSQ-SI-VHSNGNTYLQWYLQKPGQSPKLLIYK--- 54 usage_00029.pdb 1 ---VTQPDARVTVSEGASLQLRCKYSYSAT-------PYLFWYVQYPRQGPQMLLKYYSG 50 usage_00209.pdb 1 --VMTQSPDSLAVSLGERATINCRASQ-SV-DY-NGISYMHWYQQKPGQPPKLLIYA--- 52 usage_00228.pdb 1 ELVLTQSPGTLSLSAGERATLSCRASQ-SVSS-----GSLAWYQQKPGQAPRLLIYG--- 51 usage_00255.pdb 1 -LVMTQTPAIMSASPGEKVTMTCSASS-SV-------SSVHWYQQKSGTSPKRWIYD--- 48 usage_00261.pdb 1 -IQMTQSPASLSVSVGETVTITCRASE-NI-Y-----SNLVWYQQKQGKSPQVLVYA--- 49 TQ p S G C S WY Qk P y usage_00005.pdb 51 -GSTLQSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQHN 92 usage_00011.pdb 50 -ASNRATGIPARFSGSGSG--TDFTLTISSLEPEDFAVYYCQQRS 91 usage_00016.pdb 48 -TSNLASGVPGRFSGSGSG--ISYSLTISSMEAEDVATYYCFQGS 89 usage_00022.pdb 55 -VSNRFSGVPDRFSGSGSG--TDFTLKINRVEAEDLGVYYCFQGS 96 usage_00029.pdb 51 DPVVQGV---NGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSA 92 usage_00209.pdb 53 -ASNPESGVPDRFSGSGSG--TDFTLTISSLQAEDVAVYYCQQII 94 usage_00228.pdb 52 -ASTRATGIPDRFSGSGSG--TDFTLTIGRLEPEDLAVYYCQQYG 93 usage_00255.pdb 49 -TSKLPSGVPGRFSGSGSG--TSYSLTISSMEAEDAATYYCQQWS 90 usage_00261.pdb 50 -ATNLPDGVPSRFSGSGSG--TQYSLKINSLQSEDSGSYYCQHFW 91 rFsgsgSg L i eD YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################