################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:32 2021 # Report_file: c_1417_52.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00030.pdb # 2: usage_00061.pdb # 3: usage_00062.pdb # 4: usage_00511.pdb # 5: usage_00512.pdb # 6: usage_00513.pdb # 7: usage_00514.pdb # # Length: 51 # Identity: 3/ 51 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 51 ( 43.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 51 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 DNYDQLVRIAKVLG-----TEDLYDYIDKYNIEL-----DPRFNDILG--- 38 usage_00061.pdb 1 -KYDQIIAMSD---PHATDPGYIDKLE-------LPGHVKKALKFTWEKLG 40 usage_00062.pdb 1 GKYDQIIAMSD---PHATDPGYIDKLE-------LPGHVKKALKFTWEKLG 41 usage_00511.pdb 1 GKYDQLIAMSD---PHAGDPKYIDKLE-------IPDHLKATLKYTWEKLG 41 usage_00512.pdb 1 GKYDQLIAMSD---PHAGDPKYIDKLE-------IPDHLKATLKYTWEKLG 41 usage_00513.pdb 1 GKYDQLIAMSD---PHAGDPKYIDKLE-------IPDHLKATLKYTWEKLG 41 usage_00514.pdb 1 GKYDQLIAMSD---PHAGDPKYIDKLE-------IPDHLKATLKYTWEKLG 41 kYDQ iamsd p yidkle k lk twe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################