################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:25 2021 # Report_file: c_0165_15.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00016.pdb # 2: usage_00051.pdb # 3: usage_00063.pdb # 4: usage_00110.pdb # 5: usage_00137.pdb # 6: usage_00142.pdb # 7: usage_00143.pdb # 8: usage_00144.pdb # 9: usage_00174.pdb # # Length: 171 # Identity: 15/171 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/171 ( 16.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/171 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 FVLVD---RPRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKG 57 usage_00051.pdb 1 -IRYE----VKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRA 55 usage_00063.pdb 1 MVLKE----RQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRA 56 usage_00110.pdb 1 FVLLD---RSRPGVALVTLNRPERMNSMAFDVMVPLLELLGDLRHDNSVRVVILTGAGRG 57 usage_00137.pdb 1 LVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGT 60 usage_00142.pdb 1 GISVE----HDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRA 56 usage_00143.pdb 1 GISVE----HDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRA 56 usage_00144.pdb 1 GISVE----HDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRA 56 usage_00174.pdb 1 FILSH----VEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRG 56 v L rP N D vR tgaG usage_00016.pdb 58 FCSGIPHIGGL-----TQPT------IA-----LRSMELLDEVILTLRRMHQPVIAAING 101 usage_00051.pdb 56 FCAG--------E--D----L---------DHGDVLRSRYAPMMKALHHLEKPVVAAVNG 92 usage_00063.pdb 57 FSAG--------Q--D-----LTEKPDY-----EAHLRRYNRVVEALSGLEKPLVVAVNG 96 usage_00110.pdb 58 FSSG-------M-------------------------EVLDNVILALRRLHQPVIAAVNG 85 usage_00137.pdb 61 FCAG--------A--DSAYD------MA-----VERAREMAALMRAIVESRLPVIAAIDG 99 usage_00142.pdb 57 FCSG--------G--D----------DT-----AGAADAANRVVRAITSLPKPVIAGVHG 91 usage_00143.pdb 57 FCSG--------G--D----------DT-----AGAADAANRVVRAITSLPKPVIAGVHG 91 usage_00144.pdb 57 FCSG--------GGG-----------DT-----AGAADAANRVVRAITSLPKPVIAGVHG 92 usage_00174.pdb 57 FCAG--------Q--D-----LN-----APDLGMSVERFYNPLVRRLAKLPKPVICAVNG 96 F G Pv G usage_00016.pdb 102 AAIGGGLCLALACDVRVASQDAYFRAAG--INNGLTASELGLSYLLPRAI- 149 usage_00051.pdb 93 AAAGAGMSLALACDFRLLSEKASFAPAF--IHVGLVPDAGHLYY-LPRL-- 138 usage_00063.pdb 97 VAAGAGMSLALWGDLRLAAVGASFTTAF--VRIGLVPDSGLSFL-LPRL-- 142 usage_00110.pdb 86 AAIGGGLCLALACDVRIAAHNAYFRAAGGL--------TASELG-LSY--- 124 usage_00137.pdb 100 HVRAGGFGLVGACDIAVAGPRSSFALTE--ARIGVAPAIISLT--LLPKL- 145 usage_00142.pdb 92 AAVGFGCSLALACDLVVAAPASYFQLAF--TRVGLMPDGGASAL-LPLL-- 137 usage_00143.pdb 92 AAVGFGCSLALACDLVVAAPASYFQLAF--TRVGLMPDGGASAL-LPLL-- 137 usage_00144.pdb 93 AAVGFGCSLALACDLVVAAPASYFQLAF--TRVGLMPDGGASAL-LPLL-- 138 usage_00174.pdb 97 VAAGAGATLALGGDIVIAARSAKFVMAF--SKLGLIPDCGGTWL-LPRVAG 144 a g G Lal D a F a L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################