################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:53:00 2021 # Report_file: c_1198_122.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00208.pdb # 2: usage_00268.pdb # 3: usage_00598.pdb # 4: usage_00717.pdb # 5: usage_00853.pdb # 6: usage_00872.pdb # 7: usage_01113.pdb # 8: usage_01116.pdb # 9: usage_01119.pdb # 10: usage_01241.pdb # 11: usage_01266.pdb # 12: usage_01365.pdb # 13: usage_01606.pdb # 14: usage_01607.pdb # 15: usage_01674.pdb # 16: usage_01790.pdb # 17: usage_01824.pdb # 18: usage_01825.pdb # 19: usage_01826.pdb # 20: usage_01847.pdb # 21: usage_01848.pdb # 22: usage_01849.pdb # 23: usage_01850.pdb # 24: usage_01851.pdb # 25: usage_01852.pdb # 26: usage_02003.pdb # 27: usage_02007.pdb # 28: usage_02064.pdb # 29: usage_02211.pdb # 30: usage_02212.pdb # 31: usage_02331.pdb # 32: usage_02361.pdb # 33: usage_02372.pdb # 34: usage_02422.pdb # 35: usage_02450.pdb # # Length: 30 # Identity: 9/ 30 ( 30.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 30 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 30 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00208.pdb 1 STKGPSVFPL---AP----ALGCLVKDYFP 23 usage_00268.pdb 1 -TKGPSVFPL---AP-STAALGCLVKDYFP 25 usage_00598.pdb 1 STKGPSVFPLGTA------ALGCLVKDYFP 24 usage_00717.pdb 1 -TKGPSVFPL---AP-STAALGCLVKDYFP 25 usage_00853.pdb 1 STKGPSVFPL---AP-STAALGCLVKDYFP 26 usage_00872.pdb 1 -TKGPSVFPL---AP-STAALGCLVKDYFP 25 usage_01113.pdb 1 STKGPSVFPL---A--GTAALGCLVKDYFP 25 usage_01116.pdb 1 STKGPSVFPL---A--GTAALGCLVKDYFP 25 usage_01119.pdb 1 STKGPSVFPL---A--GTAALGCLVKDYFP 25 usage_01241.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01266.pdb 1 STKGPSVFPL---AP------GCLVKDYFP 21 usage_01365.pdb 1 -TKGPSVFPL---AP-STAALGCLVKDYFP 25 usage_01606.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01607.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01674.pdb 1 -TKGPSVFPL---AP-GTAALGCLVKDYFP 25 usage_01790.pdb 1 -TKGPSVFPL---AP-GTAALGCLVKDYFP 25 usage_01824.pdb 1 STKGPSVFPL---A------LGCLVKDYFP 21 usage_01825.pdb 1 STKGPSVFPL-----------GCLVKDYFP 19 usage_01826.pdb 1 STKGPSVFPL---AP-STAALGCLVKDYFP 26 usage_01847.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01848.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01849.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01850.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01851.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_01852.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 usage_02003.pdb 1 ---GPSVFPL---A-GGTAALGCLVKDYFP 23 usage_02007.pdb 1 --TKGPSVF-------GTAALGCLVKDYFP 21 usage_02064.pdb 1 -TKGPSVFPL---AP-GTAALGCLVKDYFP 25 usage_02211.pdb 1 ---GPSVFPL---AP-STAALGCLVKDYFP 23 usage_02212.pdb 1 STKGPSVFPL---AP-STAALGCLVKDYFP 26 usage_02331.pdb 1 -TKGPSVFPL---AP-STAALGCLVKDYFP 25 usage_02361.pdb 1 -TKGPSVFPL---AP-GTAALGCLVKDYFP 25 usage_02372.pdb 1 STKGPS---------------GCLVKDYFP 15 usage_02422.pdb 1 -TKGPSVFPL---AP-GTAALGCLVKDYFP 25 usage_02450.pdb 1 STKGPSVFPL---AP-GTAALGCLVKDYFP 26 gps GCLVKDYFP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################