################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:17 2021 # Report_file: c_1207_72.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00023.pdb # 2: usage_00139.pdb # 3: usage_00195.pdb # 4: usage_00196.pdb # 5: usage_00232.pdb # 6: usage_00270.pdb # 7: usage_00434.pdb # 8: usage_00465.pdb # 9: usage_00582.pdb # 10: usage_00627.pdb # 11: usage_01233.pdb # 12: usage_01467.pdb # # Length: 96 # Identity: 0/ 96 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 96 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 93/ 96 ( 96.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 --------GLSIIGVWE-----RGS--------------------------LTTP---QR 18 usage_00139.pdb 1 K--SVDV-----EYTVQ----------F-T------PLNPDDD-FRPGLKDTKLL----- 30 usage_00195.pdb 1 P--IGA-----ARVGYI----------N---------------------DQYVLN--PTQ 20 usage_00196.pdb 1 P--IGA-----ARVGYI----------N---------------------DQYVLN--PTQ 20 usage_00232.pdb 1 P---VYP-----HYFYS----------KV-------------------REEL-------- 15 usage_00270.pdb 1 ------------WTIYD----------N-N------------N-NIT--DQPILN--LPN 20 usage_00434.pdb 1 ------N-----IGYGK----------V-IL--FGE-----HFVVHGA-EAIVAG--I-S 27 usage_00465.pdb 1 ------------RYRCY----------Y-GSDT----------------AGRSES----- 16 usage_00582.pdb 1 S--LGA-----ARVGYR----------G---------------------GEYLLN--PSL 20 usage_00627.pdb 1 DNVAMIG-----YVSDN----L-----T---------------------HGYVPLNE--- 22 usage_01233.pdb 1 -----------------PVLF------V---------------------QAGY------- 9 usage_01467.pdb 1 P--VDVSVSIFINKIYG-----V--NTL---------------------EQTYK------ 24 usage_00023.pdb 19 ET---VLTEQS------------LLVLAG------- 32 usage_00139.pdb 31 -----------------------KTLAI-------- 35 usage_00195.pdb 21 DELKE---S-K------------LDLVVAG------ 34 usage_00196.pdb 21 DELKE---S-K------------LDLVVAG------ 34 usage_00232.pdb 16 ----E---L-M------------SIDRRYE---S-- 26 usage_00270.pdb 21 F-DIN---N-S------------NQILKLE--K--- 34 usage_00434.pdb 28 -----------------------EYTECRLEINPG- 39 usage_00465.pdb 17 ----------S------------DPLELVVTG---- 26 usage_00582.pdb 21 DELKD---S-A------------LDLVVAG------ 34 usage_00627.pdb 23 ---SG---V-V------------LT--------A-- 29 usage_01233.pdb 10 ----L---E-GGLFDDATYDELPPSFSLSL------ 31 usage_01467.pdb 25 --------V--------------DGYIVAQ-----W 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################