################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:46 2021 # Report_file: c_1163_19.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00103.pdb # 4: usage_00104.pdb # 5: usage_00178.pdb # 6: usage_00198.pdb # 7: usage_00199.pdb # 8: usage_00277.pdb # 9: usage_00440.pdb # 10: usage_00501.pdb # 11: usage_00538.pdb # 12: usage_00839.pdb # 13: usage_00887.pdb # 14: usage_00994.pdb # 15: usage_01030.pdb # # Length: 47 # Identity: 43/ 47 ( 91.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 47 ( 91.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 47 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00063.pdb 1 ----TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 43 usage_00103.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00104.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00178.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00198.pdb 1 ---PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 44 usage_00199.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00277.pdb 1 ----TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 43 usage_00440.pdb 1 ---PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 44 usage_00501.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00538.pdb 1 ---PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 44 usage_00839.pdb 1 --NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 45 usage_00887.pdb 1 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 47 usage_00994.pdb 1 ---PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 44 usage_01030.pdb 1 ----TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 43 TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################