################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:30 2021 # Report_file: c_1025_83.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00037.pdb # 2: usage_00167.pdb # 3: usage_00192.pdb # 4: usage_00193.pdb # 5: usage_00216.pdb # 6: usage_00362.pdb # 7: usage_00363.pdb # 8: usage_00609.pdb # 9: usage_00610.pdb # # Length: 57 # Identity: 19/ 57 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 57 ( 40.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 57 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 ---NVVLIGKKPVMNYVLAALTLLNQG-VSEIVIKARGRAISKAVDTVEIVRNRFLP 53 usage_00167.pdb 1 ---NIIFVGKKPTMNYVLAVVTQFNNN-ANKIIIKARGKTISKAVDVAEITRHK--- 50 usage_00192.pdb 1 ---NVVLIGKKPVMNYVLAALTLLNQG-VSEIVIKARGRAISKAVDTVE-------- 45 usage_00193.pdb 1 ---NVVLIGKKPVMNYVLAALTLLNQG-VSEIVIKARGRAISKAVDTVEIVRNRFLP 53 usage_00216.pdb 1 ---PEVRIGRKPVMNYVLAILTTLMEQGTNQVVVKARGRNINRAVDAVEIVRKRF-- 52 usage_00362.pdb 1 ---HVVYIGKKPVMNYVLAVITQFHEG-AKEVSIKARGRAISRAVDVAEIVRNR--- 50 usage_00363.pdb 1 TEEHVVYIGKKPVMNYVLAVITQFHEG-AKEVSIKARGRAISRAVDVAE-------- 48 usage_00609.pdb 1 ---PEVRIGRKPVMNYVLAILTTLMEQGTNQVVVKARGRNINRAVDAVEIVR----- 49 usage_00610.pdb 1 ---PEVRIGRKPVMNYVLAILTTLMEQGTNQVVVKARGRNINRAVDAVEIVR----- 49 v iG KPvMNYVLA T KARGr I AVD E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################