################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:33 2021 # Report_file: c_0782_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00006.pdb # 2: usage_00085.pdb # 3: usage_00106.pdb # 4: usage_00121.pdb # 5: usage_00174.pdb # 6: usage_00213.pdb # 7: usage_00289.pdb # 8: usage_00306.pdb # # Length: 88 # Identity: 20/ 88 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 88 ( 48.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 88 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHS 54 usage_00085.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVAHS 54 usage_00106.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHS 54 usage_00121.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHS 54 usage_00174.pdb 1 SASCVPGADKGQFPNLCRLC-AGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRES 59 usage_00213.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHS 54 usage_00289.pdb 1 SGSCAPCADGTDFPQLCQLCP------GCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHS 54 usage_00306.pdb 1 -LCAGDDQ------GLD----------KCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKND 43 sc p a Lc C s YfgYsGAFkCL dgaGDVAFv s usage_00006.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00085.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00106.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00121.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00174.pdb 60 TVFEDLS--D-EA-----ERDEYELLCP 79 usage_00213.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00289.pdb 55 TIFENLA--N-KA-----DRDQYELLCL 74 usage_00306.pdb 44 TVWENTNGESTADWAKNLKREDFRLLCL 71 T fEnl a Rd yeLLCl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################