################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:15 2021 # Report_file: c_0896_25.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00209.pdb # 2: usage_00230.pdb # 3: usage_00231.pdb # 4: usage_00256.pdb # 5: usage_00257.pdb # 6: usage_00287.pdb # 7: usage_00362.pdb # 8: usage_00363.pdb # # Length: 105 # Identity: 53/105 ( 50.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/105 ( 58.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/105 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00209.pdb 1 EFASVGSKIFPSFVKFLKSKDPN-DGTEQALLEELKALDGHLKVH-GPFIAGEKITAVDL 58 usage_00230.pdb 1 -----GSKIFSCFTTFLKSKDP-NDGSEKALLTELQALEEHLKAH-GPFINGQNISAADL 53 usage_00231.pdb 1 -----GSKIFSCFTTFLKSKDP-NDGSEKALLTELQALEEHLKAH-GPFINGQNISAADL 53 usage_00256.pdb 1 -------NIFGTFGTFLKSKDS-NDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDL 52 usage_00257.pdb 1 --------IFGTFGTFLKSKDS-NDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDL 51 usage_00287.pdb 1 -----GSKIFPSFVKFLKSKDA-SDGSEKALLDELQALDEHLKAH-GPYISGENVSAADL 53 usage_00362.pdb 1 -----GSKIFSCFTTFLKSKDP-NDGSEKALLTELQALEEHLKAH-GPFINGQNISAADL 53 usage_00363.pdb 1 -----GSKIFSCFTTFLKSKDP-NDGSEKALLTELQALEEHLKAH-GPFINGQNISAADL 53 IF F FLKSKD DGsE ALL EL AL HLK H GPfI G sA DL usage_00209.pdb 59 SLAPKLYHLEVALGHFKNWPIPDNLTHVLNYIKLLFSRESFKKTR 103 usage_00230.pdb 54 SLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKT- 97 usage_00231.pdb 54 SLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKT- 97 usage_00256.pdb 53 SLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKT- 96 usage_00257.pdb 52 SLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEK-- 94 usage_00287.pdb 54 SLGPKLFHLQVALEHFKGWKIPENLTSVHAYTKALFSRESFVKT- 97 usage_00362.pdb 54 SLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKT- 97 usage_00363.pdb 54 SLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIK-- 96 SLaPKLyHLqVAL HFK W Pe Vh Y LFS SF K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################