################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:45:09 2021 # Report_file: c_0351_3.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00019.pdb # 5: usage_00033.pdb # 6: usage_00039.pdb # 7: usage_00047.pdb # 8: usage_00049.pdb # 9: usage_00050.pdb # 10: usage_00059.pdb # 11: usage_00060.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # 14: usage_00063.pdb # 15: usage_00065.pdb # 16: usage_00066.pdb # 17: usage_00067.pdb # 18: usage_00085.pdb # 19: usage_00086.pdb # 20: usage_00087.pdb # 21: usage_00107.pdb # 22: usage_00109.pdb # # Length: 94 # Identity: 17/ 94 ( 18.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 94 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 94 ( 19.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00013.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00014.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00019.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00033.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGE----VVK 53 usage_00039.pdb 1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT-----Q----AVR 51 usage_00047.pdb 1 ---WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGD----TVK 53 usage_00049.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGE----VVK 53 usage_00050.pdb 1 ---WLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLSR----PASWDRIR 53 usage_00059.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00060.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00061.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00062.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00063.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00065.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00066.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00067.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00085.pdb 1 ---WFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGD----VIK 53 usage_00086.pdb 1 ---WFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGD----VIK 53 usage_00087.pdb 1 ---WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGE----VVK 53 usage_00107.pdb 1 ---WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDE-----G----VVK 48 usage_00109.pdb 1 ---WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGD----TVK 53 Wff R Ae Ll gN G F IR Se g LSVrd usage_00012.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00013.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTN-- 85 usage_00014.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00019.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00033.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00039.pdb 52 HYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQ- 84 usage_00047.pdb 54 HYKIRT----GFYISPRSTFSTLQELVDHYKKG- 82 usage_00049.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00050.pdb 54 HYRIHCLDNGWLYISPRLTFPSLQALVDHYSELA 87 usage_00059.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00060.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00061.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00062.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00063.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00065.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00066.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00067.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00085.pdb 54 HYKIRSLDNGGYYISPRITFPCISDMIKHYQKQ- 86 usage_00086.pdb 54 HYKIRSLD-GGYYISPRITFPCISDMIKHYQKQ- 85 usage_00087.pdb 54 HYKIRNLDNGGFYISPRITFPGLHELVRHYTNA- 86 usage_00107.pdb 49 HYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTT- 81 usage_00109.pdb 54 HYKIRTLDNGGFYISPRSTFSTLQELVDHYKKG- 86 HY I r F y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################