################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:30 2021 # Report_file: c_1074_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00009.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00423.pdb # 8: usage_00424.pdb # 9: usage_00442.pdb # 10: usage_00443.pdb # 11: usage_00444.pdb # 12: usage_00567.pdb # # Length: 79 # Identity: 62/ 79 ( 78.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 79 ( 78.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 79 ( 21.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -EVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYS-----GRESRQCPIPSHVIQK- 53 usage_00042.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQ-- 58 usage_00043.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQ-- 58 usage_00044.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQ-- 58 usage_00069.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRY------GRESRQCPIPSHVIQK- 53 usage_00070.pdb 1 SEVEAKNKIEELLASLLNRVC---RKPHTVRLIIRRY------GRESRQCPIPSHVIQK- 50 usage_00423.pdb 1 SEVEAKNKIEELLASLLNRVC-QDRKPHTVRLIIRRY------GRESRQCPIPSHVIQK- 52 usage_00424.pdb 1 SEVEAKNKIEELLASLLNRVC-QDRKPHTVRLIIRRY------GRESRQCPIPSHVIQK- 52 usage_00442.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYS-----GRESRQCPIPSHVIQKL 55 usage_00443.pdb 1 SEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYS-----GRESRQCPIPSHVIQKL 55 usage_00444.pdb 1 -EVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYS-----GRESRQCPIPSHVIQKL 54 usage_00567.pdb 1 --VEAKNKIEELLASLLNRVC-QDRKPHTVRLIIRRY------GRESRQCPIPSHVIQK- 50 VEAKNKIEELLASLLNRVC RKPHTVRLIIRRY GRESRQCPIPSHVIQ usage_00009.pdb 54 --DVMTPMVDILMKLFRN- 69 usage_00042.pdb 59 ---VMTPMVDILMKLFRN- 73 usage_00043.pdb 59 ---VMTPMVDILMKLFRN- 73 usage_00044.pdb 59 ---VMTPMVDILMKLFRNM 74 usage_00069.pdb 54 --DVMTPMVDILMKLFRNM 70 usage_00070.pdb 51 --DVMTPMVDILMKLFRNM 67 usage_00423.pdb 53 --DVMTPMVDILMKLFRNM 69 usage_00424.pdb 53 --DVMTPMVDILMKLFRNM 69 usage_00442.pdb 56 NYDVMTPMVDILMKLFRNM 74 usage_00443.pdb 56 NYDVMTPMVDILMKLFRNM 74 usage_00444.pdb 55 NYDVMTPMVDILMKLFRN- 72 usage_00567.pdb 51 --DVMTPMVDILMKLFRNM 67 VMTPMVDILMKLFRN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################