################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:17:04 2021 # Report_file: c_1434_241.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00608.pdb # 2: usage_01558.pdb # 3: usage_01559.pdb # 4: usage_01560.pdb # 5: usage_01751.pdb # 6: usage_01752.pdb # 7: usage_01753.pdb # 8: usage_01754.pdb # 9: usage_01755.pdb # 10: usage_01760.pdb # 11: usage_01761.pdb # 12: usage_01762.pdb # 13: usage_01763.pdb # 14: usage_01764.pdb # 15: usage_01767.pdb # 16: usage_01768.pdb # 17: usage_01769.pdb # 18: usage_03353.pdb # 19: usage_03354.pdb # 20: usage_03355.pdb # 21: usage_03356.pdb # 22: usage_03357.pdb # 23: usage_03358.pdb # 24: usage_03359.pdb # 25: usage_03360.pdb # # Length: 56 # Identity: 5/ 56 ( 8.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 56 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 56 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00608.pdb 1 EENARALFKRLE----KTSRMWDSMIEYEFMVG----SMELFRELVDQKMDAIKAD 48 usage_01558.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01559.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01560.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01751.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01752.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01753.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLM--- 50 usage_01754.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01755.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01760.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01761.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01762.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01763.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_01764.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01767.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_01768.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLM--- 50 usage_01769.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_03353.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLM--- 50 usage_03354.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_03355.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_03356.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLM--- 50 usage_03357.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKAN 53 usage_03358.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_03359.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLMKA- 52 usage_03360.pdb 1 --SAVWRLLDQRTKLRVSTLRDQALALKPASS-SVDNWAEATEELAQQQQLLM--- 50 sAvwrlldqr vstlrdqalalkpass waEateELaqQqqllm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################