################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:49 2021 # Report_file: c_1033_74.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00082.pdb # 4: usage_00179.pdb # 5: usage_00444.pdb # 6: usage_00539.pdb # 7: usage_00597.pdb # 8: usage_00760.pdb # 9: usage_00859.pdb # 10: usage_00938.pdb # 11: usage_01017.pdb # 12: usage_01052.pdb # 13: usage_01084.pdb # 14: usage_01085.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 68 ( 4.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 68 ( 54.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 -PVVMLTAR------G--E--E-EDRVRGLETGADDYITKPF-SPKELVARIKAVMRR-- 45 usage_00040.pdb 1 -PVVMLTAR------G--E--E-EDRVRGLETGADDYITKPF-SPKELVARIKAVMRRI- 46 usage_00082.pdb 1 --GYIVYTPYSEGQSHSIN--VATSLCG--L-LRGIAVPESL-VDKVKAG---------- 42 usage_00179.pdb 1 PIL--LTAQ------GDIS--A-KIAGF--EAGANDYLAKPF-EPQELVYRVKNILAR-- 44 usage_00444.pdb 1 -PVVMLTAR------G--E--E-EDRVRGLETGADDYITKPF-SPKELVARIKAVMRR-- 45 usage_00539.pdb 1 -PVVAVTAF------AMKG--D-EERIR--EGGCEAYISKPI-SVVHFLETIKRLL---- 43 usage_00597.pdb 1 -GIILVTGR------SDRI--D-RIVGL--E-GADDYVTKPL-ELRELVVRVKNLLWRID 46 usage_00760.pdb 1 -PVIVLTAK------GGEE--D-ESLAL--SLGARKVMRKPF-SPSQFIEEVKHLLN--- 44 usage_00859.pdb 1 -PVVMLTSS------Q--E--E-SDVVKSYELGVNAYVVKPV-EFKQFVAAIAD------ 41 usage_00938.pdb 1 -PILVLTTE------GSDA--F-KAAAR--DAGATGWIEKPI-DPGVLVELVATLSE--- 44 usage_01017.pdb 1 -VVLVSSDN------PTSE--E-EVHAF--EQGADDYIAKPYRSIKALVARIEARL---- 44 usage_01052.pdb 1 -PVVMLTAR------GEEE--D-RVRGL--ETGADDYITKPF-SPKELVARIKAVMR--- 44 usage_01084.pdb 1 -PVIMLTAR------G--SELD-RVLGL--ELGADDYLPKPF-NDRELVARIRAILRRSH 47 usage_01085.pdb 1 -PVIMLTAR------GSEL--D-RVLGL--ELGADDYLPKPF-NDRELVARIRAILRRSH 47 g kp usage_00039.pdb -------- usage_00040.pdb -------- usage_00082.pdb -------- usage_00179.pdb -------- usage_00444.pdb -------- usage_00539.pdb -------- usage_00597.pdb 47 Q------- 47 usage_00760.pdb -------- usage_00859.pdb -------- usage_00938.pdb -------- usage_01017.pdb -------- usage_01052.pdb -------- usage_01084.pdb 48 WSEQKLAA 55 usage_01085.pdb 48 WSEQKLAA 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################