################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:08 2021 # Report_file: c_0057_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00028.pdb # 7: usage_00034.pdb # 8: usage_00035.pdb # # Length: 166 # Identity: 67/166 ( 40.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/166 ( 41.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/166 ( 4.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -KAHARAVLDGPIGQELLTRFDGKGFKALAWAENGFRH-SNSKRAVKEPGDLKGLK-RT- 56 usage_00024.pdb 1 -KAHARAVLDGPIGQELLTRFDGKGFKALAWAENGFRH-SNSKRAVKEPGDLKGLK-RT- 56 usage_00025.pdb 1 DYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTM 60 usage_00026.pdb 1 DYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTM 60 usage_00027.pdb 1 DYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTM 60 usage_00028.pdb 1 -KAHARAVLDGPIGQDLLGKFDAKGFKALAWGENGFRHMTNSKRDVKGPEDLKGLKMRTM 59 usage_00034.pdb 1 -LPHARAVLDSKIGQDMLAKFPDRGIIALAWGEQGFRHLTNNVRPVKTPADAKGLKIRTT 59 usage_00035.pdb 1 -LPHARAVLDSKIGQDMLAKFPDRGIIALAWGEQGFRHLTNNVRPVKTPADAKGLKIRTT 59 HAR V D IGQ L G LAW E GFRH N R D GLK RT usage_00023.pdb 57 ENPVHIAAYKGFGIVTTP-AFSEVFTALQQGTVDGQENPLSVIISAKFDQVQKHLTLTGH 115 usage_00024.pdb 57 ENPVHIAAYKGFGIVTTP-AFSEVFTALQQGTVDGQENPLSVIISAKFDQVQKHLTLTGH 115 usage_00025.pdb 61 ENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGH 120 usage_00026.pdb 61 ENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGH 120 usage_00027.pdb 61 ENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGH 120 usage_00028.pdb 60 ENPVHIAAYKGFGIITTPMAFPEVFTALQQGTVDGQENPLSVIIASKFDQVQKHLSLTGH 119 usage_00034.pdb 60 ENPIHITAFRQIGILPTPMAWPEVATALQQGTIDGQENPLSVITSAKLSQLQKYLSLTGH 119 usage_00035.pdb 60 ENPIHITAFRQIGILPTPMAWPEVATALQQGTIDGQENPLSVITSAKLSQLQKYLSLTGH 119 EN H G TP A E TALQQGT DGQENP VI s K Q QK L LTGH usage_00023.pdb 116 VYSPALFL-NKALFDKLPAADQQAFIDAARQGAKLNRARVDEDDAK 160 usage_00024.pdb 116 VYSPALFL-NKALFDKLPAADQQAFIDAARQGAKLNRARVDEDDAK 160 usage_00025.pdb 121 VYSPAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDE-- 164 usage_00026.pdb 121 VYSPAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEAN 166 usage_00027.pdb 121 VYSPAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEAN 166 usage_00028.pdb 120 VYSPCIWVMNKAVFDKLSAADKQAFLDAAKEGTKANRARVDEDDAK 165 usage_00034.pdb 120 VYGPALVLMSANVYNGLSDAEKASFKAAGKDSAQAMRAYVDNIEQT 165 usage_00035.pdb 120 VYGPALVLMSANVYNGLSDAEKASFKAAGKDSAQAMRAYVDNIEQT 165 VY Pa L A F A R V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################