################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:48 2021 # Report_file: c_1262_28.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00574.pdb # 2: usage_00575.pdb # 3: usage_00576.pdb # 4: usage_00577.pdb # 5: usage_00578.pdb # 6: usage_01506.pdb # 7: usage_01510.pdb # 8: usage_01511.pdb # 9: usage_01518.pdb # 10: usage_01519.pdb # 11: usage_01520.pdb # 12: usage_01521.pdb # 13: usage_01522.pdb # 14: usage_01523.pdb # 15: usage_01564.pdb # 16: usage_01565.pdb # 17: usage_01568.pdb # 18: usage_01569.pdb # 19: usage_01904.pdb # # Length: 53 # Identity: 32/ 53 ( 60.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 53 ( 60.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 53 ( 37.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00574.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_00575.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_00576.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_00577.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_00578.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01506.pdb 1 LIVNVINGPNLGRLG-R-------GGTTHDELVALIEREAAELGLKAVVRQ-- 43 usage_01510.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01511.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01518.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01519.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01520.pdb 1 LIVNVINGPNLGRLG---------GGTTHDELVALIEREAAELGLKAVVRQSD 44 usage_01521.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01522.pdb 1 LIVNVINGPNLGRLG-R--------GTTHDELVALIEREAAELGLKAVVRQSD 44 usage_01523.pdb 1 LIVNVINGPNLGRLG-RREPAVY-GGTTHDELVALIEREAAELGLKAVVRQ-- 49 usage_01564.pdb 1 LIVNVINGPS------------------HDELVALIEREAAELGLKAVVRQ-- 33 usage_01565.pdb 1 LIVNVINGPSL------------YGGTTHDELVALIEREAAELGLKAVVRQ-- 39 usage_01568.pdb 1 LIVNVINGPNLGRL-----------GTTHDELVALIEREAAELGLKAVVRQS- 41 usage_01569.pdb 1 LIVNVINGPNLGRLGY--------GGTTHDELVALIEREAAELGLKAVVRQSD 45 usage_01904.pdb 1 LIVNVINGPNLGRLG-RR------GGTTHDELVALIEREAAELGLKAVVRQ-- 44 LIVNVINGP HDELVALIEREAAELGLKAVVRQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################