################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 09:54:44 2021 # Report_file: c_1371_111.html ################################################################################################ #==================================== # Aligned_structures: 70 # 1: usage_00050.pdb # 2: usage_00056.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00089.pdb # 6: usage_00117.pdb # 7: usage_00447.pdb # 8: usage_00448.pdb # 9: usage_00449.pdb # 10: usage_00450.pdb # 11: usage_00484.pdb # 12: usage_00591.pdb # 13: usage_00603.pdb # 14: usage_00604.pdb # 15: usage_00729.pdb # 16: usage_00730.pdb # 17: usage_00731.pdb # 18: usage_00743.pdb # 19: usage_00744.pdb # 20: usage_00745.pdb # 21: usage_00753.pdb # 22: usage_00763.pdb # 23: usage_00764.pdb # 24: usage_00765.pdb # 25: usage_00872.pdb # 26: usage_00873.pdb # 27: usage_01025.pdb # 28: usage_01026.pdb # 29: usage_01027.pdb # 30: usage_01028.pdb # 31: usage_01049.pdb # 32: usage_01072.pdb # 33: usage_01073.pdb # 34: usage_01081.pdb # 35: usage_01161.pdb # 36: usage_01174.pdb # 37: usage_01175.pdb # 38: usage_01176.pdb # 39: usage_01177.pdb # 40: usage_01178.pdb # 41: usage_01179.pdb # 42: usage_01180.pdb # 43: usage_01181.pdb # 44: usage_01182.pdb # 45: usage_01183.pdb # 46: usage_01184.pdb # 47: usage_01197.pdb # 48: usage_01351.pdb # 49: usage_01352.pdb # 50: usage_01353.pdb # 51: usage_01354.pdb # 52: usage_01373.pdb # 53: usage_01411.pdb # 54: usage_01414.pdb # 55: usage_01437.pdb # 56: usage_01438.pdb # 57: usage_01439.pdb # 58: usage_01519.pdb # 59: usage_01597.pdb # 60: usage_01604.pdb # 61: usage_01653.pdb # 62: usage_01676.pdb # 63: usage_01677.pdb # 64: usage_01678.pdb # 65: usage_01679.pdb # 66: usage_01706.pdb # 67: usage_01707.pdb # 68: usage_01718.pdb # 69: usage_01735.pdb # 70: usage_01820.pdb # # Length: 94 # Identity: 12/ 94 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 94 ( 23.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 94 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00056.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00063.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00064.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00089.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00117.pdb 1 -CPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKN-------------------- 39 usage_00447.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00448.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00449.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00450.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00484.pdb 1 -TQQFMNYFRALENGYRDIPYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGNHGRIAYIS 59 usage_00591.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00603.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00604.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00729.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00730.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00731.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00743.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00744.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00745.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00753.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00763.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00764.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00765.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_00872.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_00873.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01025.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01026.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01027.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01028.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01049.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_01072.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01073.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01081.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01161.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01174.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01175.pdb 1 --------IMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 32 usage_01176.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01177.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01178.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01179.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01180.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01181.pdb 1 -------FIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 33 usage_01182.pdb 1 --------IMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 32 usage_01183.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01184.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01197.pdb 1 ELEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 40 usage_01351.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01352.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01353.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01354.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01373.pdb 1 -CPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKN-------------------- 39 usage_01411.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01414.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01437.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01438.pdb 1 --------IMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 32 usage_01439.pdb 1 ------RFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 34 usage_01519.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01597.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_01604.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01653.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01676.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01677.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01678.pdb 1 ----LCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 36 usage_01679.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01706.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01707.pdb 1 ELEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 40 usage_01718.pdb 1 ELEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 40 usage_01735.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 usage_01820.pdb 1 -LEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQN-------------------- 39 vkk YR PYHNw HA V H y n usage_00050.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00056.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00063.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_00064.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_00089.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00117.pdb 40 -------------LELTNYLEDIEIFALFISCMC 60 usage_00447.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00448.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_00449.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_00450.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_00484.pdb 60 SKSCSNPDESYGCLS--SNIPALELMALYVAAAM 91 usage_00591.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00603.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00604.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00729.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00730.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00731.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00743.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00744.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00745.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00753.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00763.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00764.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00765.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_00872.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_00873.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01025.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01026.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01027.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01028.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01049.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_01072.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01073.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01081.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01161.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_01174.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01175.pdb 33 -------------NH--TLFTDLERKGLLIACLC 51 usage_01176.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01177.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01178.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01179.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01180.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01181.pdb 34 -------------NH--TLFTDLERKGLLIACLC 52 usage_01182.pdb 33 -------------NH--TLFTDLERKGLLIACLC 51 usage_01183.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01184.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01197.pdb 41 -------------NH--TLFTDLERKGLLIACLC 59 usage_01351.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01352.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01353.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01354.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01373.pdb 40 -------------LELTNYLEDIEIFALFISCMC 60 usage_01411.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01414.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01437.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01438.pdb 33 -------------NH--TLFTDLERKGLLIACLC 51 usage_01439.pdb 35 -------------NH--TLFTDLERKGLLIACLC 53 usage_01519.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_01597.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_01604.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01653.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_01676.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01677.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01678.pdb 37 -------------NH--TLFTDLERKGLLIACLC 55 usage_01679.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01706.pdb 40 -------------NH--TLFTDLERKGLLIACLC 58 usage_01707.pdb 41 -------------NH--TLFTDLERKGLLIACLC 59 usage_01718.pdb 41 -------------NH--TLFTDLERKGLLIACLC 59 usage_01735.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 usage_01820.pdb 40 -------------NN--GLFTDLERKGLLIACLC 58 d E L i c c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################