################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:43 2021 # Report_file: c_0461_72.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00504.pdb # 2: usage_00971.pdb # 3: usage_00977.pdb # 4: usage_00978.pdb # 5: usage_00979.pdb # # Length: 132 # Identity: 23/132 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/132 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/132 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00504.pdb 1 -TLLILGDSLSAGYR------MSASAAWPALLNDKW-SKTSVVNASISGDTSQ------- 45 usage_00971.pdb 1 KTVLAFGDSLTWGADPATGLRHPVEHRWPDVLEAELAGKAKVHPEGLGGRTTCYDDHAGP 60 usage_00977.pdb 1 -TVLCYGDSLTWGYDATGSGRHALEDRWPSVLQKALGSDAHVIAEGLNGRTTAYDDHLAD 59 usage_00978.pdb 1 -TVLCYGDSLTWGYDATGSGRHALEDRWPSVLQKALGSDAHVIAEGLNGRTTAYDDHLAD 59 usage_00979.pdb 1 -TVLCYGDSLTWGYDATGSGRHALEDRWPSVLQKALGSDAHVIAEGLNGRTTAYDDHLAD 59 TvL GDSLtwGyd h e rWP vL l s a V egl GrTt usage_00504.pdb 46 ---QGLARLPALLKQHQ-PRWVLVELGGNDGL--RGFQPQQTEQTLRQILQDVKAA---- 95 usage_00971.pdb 61 ACRNGARALEVALSCHP-LDLVI-ILGTNDIKPVHGGRAEAAVSG-RRLAQIVETFIYKP 117 usage_00977.pdb 60 CDRNGARVLPTVLHTHAPLDLIVFMLGSNDMKPIIHGTAFGAVKGIERLVNLVRRHDWPT 119 usage_00978.pdb 60 CDRNGARVLPTVLHTHAPLDLIVFMLGSNDMKPIIHGTAFGAVKGIERLVNLVRRHDWPT 119 usage_00979.pdb 60 CDRNGARVLPTVLHTHAPLDLIVFMLGSNDMKPIIHGTAFGAVKGIERLVNLVRRHDWPT 119 nGar Lp L H ldl LG ND k g a av g rl V usage_00504.pdb 96 ----NAEPLLMQ 103 usage_00971.pdb 118 REA-VPKLLIVA 128 usage_00977.pdb 120 ETEEGPEILIVS 131 usage_00978.pdb 120 ETEEGPEILIVS 131 usage_00979.pdb 120 ETEEGPEILIVS 131 pe Liv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################