################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:00:26 2021 # Report_file: c_0319_2.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00008.pdb # 2: usage_00012.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00020.pdb # 8: usage_00021.pdb # 9: usage_00022.pdb # 10: usage_00030.pdb # 11: usage_00031.pdb # 12: usage_00032.pdb # 13: usage_00033.pdb # 14: usage_00046.pdb # 15: usage_00047.pdb # 16: usage_00048.pdb # 17: usage_00053.pdb # 18: usage_00054.pdb # 19: usage_00055.pdb # 20: usage_00057.pdb # 21: usage_00058.pdb # 22: usage_00059.pdb # 23: usage_00060.pdb # 24: usage_00061.pdb # # Length: 144 # Identity: 20/144 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/144 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/144 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 HPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 60 usage_00012.pdb 1 -PPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 usage_00016.pdb 1 ----YVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 56 usage_00017.pdb 1 ---SYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 57 usage_00018.pdb 1 --PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 58 usage_00019.pdb 1 --PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 58 usage_00020.pdb 1 -PPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 usage_00021.pdb 1 --PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 58 usage_00022.pdb 1 HPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 60 usage_00030.pdb 1 ----NLQEKQTDFGMRVFSQVAQNSKGSNLAFSPYGVATILAMAQLGAGGNTLKTLNAKL 56 usage_00031.pdb 1 ----YVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 56 usage_00032.pdb 1 --PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 58 usage_00033.pdb 1 ----YVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 56 usage_00046.pdb 1 ----YVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 56 usage_00047.pdb 1 -----VAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 55 usage_00048.pdb 1 ----HTAHQATDFGVKVFQQVVQASKDRNVVFSPYGVSSVLAMLQMTTAGKTRRQIQDAM 56 usage_00053.pdb 1 --PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 58 usage_00054.pdb 1 ---NLIQDKQTDFGLQVFAEAVQSAPDRNLALSPYGIASVLGMAQMGAYGATLKLLASKM 57 usage_00055.pdb 1 -NPLSLEELGSNTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLAMVM 59 usage_00057.pdb 1 -APSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 usage_00058.pdb 1 -APSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 usage_00059.pdb 1 -APSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 usage_00060.pdb 1 ---SYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 57 usage_00061.pdb 1 -APSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAM 59 dfG VF q q N SPyG asvL M Q G T m usage_00008.pdb 61 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLF--TV 117 usage_00012.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 usage_00016.pdb 57 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 115 usage_00017.pdb 58 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 116 usage_00018.pdb 59 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 117 usage_00019.pdb 59 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 117 usage_00020.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 usage_00021.pdb 59 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 117 usage_00022.pdb 61 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 119 usage_00030.pdb 57 GFSLQERGMARQQRLLQRDISS--EE-GVELASGVMVERKM-ALEKGFRRGLGKAFQASP 112 usage_00031.pdb 57 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 115 usage_00032.pdb 59 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 117 usage_00033.pdb 57 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 115 usage_00046.pdb 57 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 115 usage_00047.pdb 56 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 114 usage_00048.pdb 57 GFKVNEKGTAHALRQLSKELMGPWNKNEISTADAIFVQRDL-ELVQGFMPHFFKLFQTMV 115 usage_00053.pdb 59 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 117 usage_00054.pdb 58 GYSLQERGMPKLQRLLQRDLAS--ED-GVEVASGVMVDRKI-ILEKVFRRSLSKAFQSVP 113 usage_00055.pdb 60 RYGVN-G-VGKILKKINKAIVSKKNKDIVTVANAVFVKN-ASEIEVPFVTRNKDVFQCEV 116 usage_00057.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 usage_00058.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 usage_00059.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 usage_00060.pdb 58 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 116 usage_00061.pdb 60 GFKIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDL-KLVQGFMPHFFRLFRSTV 118 g r l V r l F F usage_00008.pdb 118 KQVDFSEVERARFIINDWVKTHTK 141 usage_00012.pdb 119 KQVDFSEVERARFIINDWVKTHTK 142 usage_00016.pdb 116 KQVDFSEVERARFIINDWVKTHT- 138 usage_00017.pdb 117 KQVDFSEVERARFIINDWVKTHT- 139 usage_00018.pdb 118 KQVDFSEVERARFIINDWVKTHT- 140 usage_00019.pdb 118 KQVDFSEVERARFIINDWVKTHTK 141 usage_00020.pdb 119 KQVDFSEVERARFIINDWVKTHTK 142 usage_00021.pdb 118 KQVDFSEVERARFIINDWVKTHTK 141 usage_00022.pdb 120 KQVDFSEVERARFIINDWVKTHTK 143 usage_00030.pdb 113 HQLDFSRPDQALDIINAWVSDHT- 135 usage_00031.pdb 116 KQVDFSEVERARFIINDWVKTHTK 139 usage_00032.pdb 118 KQVDFSEVERARFIINDWVKTHTK 141 usage_00033.pdb 116 KQVDFSEVERARFIINDWVKTHTK 139 usage_00046.pdb 116 KQVDFSEVERARFIINDWVKTH-- 137 usage_00047.pdb 115 KQVDFSEVERARFIINDWVKTH-- 136 usage_00048.pdb 116 KQVDFSEVERARFIINDWVERHT- 138 usage_00053.pdb 118 KQVDFSEVERARFIINDWVKTHTK 141 usage_00054.pdb 114 HQIDFSQPEMARQVINSWTSDHT- 136 usage_00055.pdb 117 RNVNFEDPASACDSINAWVKNE-- 138 usage_00057.pdb 119 KQVDFSEVERARFIINDWVKTHTK 142 usage_00058.pdb 119 KQVDFSEVERARFIINDWVKTHTK 142 usage_00059.pdb 119 KQVDFSEVERARFIINDWVKTH-- 140 usage_00060.pdb 117 KQVDFSEVERARFIINDWVKTHTK 140 usage_00061.pdb 119 KQVDFSEVERARFIINDWVKTHTK 142 q dFs A IN Wv h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################