################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:47 2021 # Report_file: c_0970_129.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00041.pdb # 2: usage_00085.pdb # 3: usage_00615.pdb # 4: usage_00616.pdb # 5: usage_00838.pdb # 6: usage_01144.pdb # 7: usage_01301.pdb # 8: usage_01302.pdb # # Length: 64 # Identity: 17/ 64 ( 26.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 64 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 64 ( 3.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 KRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWKT 60 usage_00085.pdb 1 QRIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKT 60 usage_00615.pdb 1 QRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMDEVKALSLWMTFKG 60 usage_00616.pdb 1 QRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMDEVKALSLWMTFKG 60 usage_00838.pdb 1 KRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDPGVTLGQTAGLAAWMTLKA 60 usage_01144.pdb 1 -RVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWKT 59 usage_01301.pdb 1 ERQLIFRVPWVDDQGQVHVNRGFRVQFNSALGPYKGGLRFHPSVNLGIVKFLGFEQIFKN 60 usage_01302.pdb 1 ERQLIFRVPWVDDQGQVHVNRGFRVQFNSALGPYKGGLRFHPSVNLGIVKFLGFEQIFKN 60 R P D G V v G R A GP KGG R hP v vk L K usage_00041.pdb 61 AVMN 64 usage_00085.pdb 61 AVMD 64 usage_00615.pdb 61 GALG 64 usage_00616.pdb 61 GALG 64 usage_00838.pdb 61 AVYD 64 usage_01144.pdb 60 AVMN 63 usage_01301.pdb 61 SLT- 63 usage_01302.pdb 61 SLT- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################