################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:13 2021 # Report_file: c_1337_101.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00690.pdb # 2: usage_00769.pdb # 3: usage_00839.pdb # 4: usage_00898.pdb # 5: usage_00900.pdb # 6: usage_00901.pdb # 7: usage_00926.pdb # 8: usage_00931.pdb # 9: usage_00932.pdb # 10: usage_01194.pdb # 11: usage_01231.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 49 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 49 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00690.pdb 1 --RSVQAKGKYVLDKQLGGLFSWEIDA-------DNGDILNSMNASLG- 39 usage_00769.pdb 1 ---GIQNLYKYAYNNGYNGALTWQFNSGGDCSDT-YSNQMYGMQ----- 40 usage_00839.pdb 1 SVDSVLGKVKYVDRNKLGGLFAWEIDA-------DNGDLLNAINA---- 38 usage_00898.pdb 1 -HRSVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMA- 40 usage_00900.pdb 1 -HRSVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMAG 41 usage_00901.pdb 1 ---SVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMA- 38 usage_00926.pdb 1 -HRSVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMA- 40 usage_00931.pdb 1 -HRSVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMA- 40 usage_00932.pdb 1 -HRSVLAKGNYAKSLGLAGLFSWEIDA-------DNGDILNAMHEGMAG 41 usage_01194.pdb 1 --RSVQAKGKYVLDKQLGGLFSWEIDA-------DNGDILNSMNASLG- 39 usage_01231.pdb 1 --RSVQAKGKYVLDKQLGGLFSWEIDA-------DNGDILNSMNASLG- 39 sv k Y l Glf Weida ngd ln m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################