################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:25 2021 # Report_file: c_0070_34.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00223.pdb # 6: usage_00224.pdb # # Length: 251 # Identity: 118/251 ( 47.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/251 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/251 ( 3.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 60 usage_00044.pdb 1 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 60 usage_00045.pdb 1 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 60 usage_00046.pdb 1 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 60 usage_00223.pdb 1 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG 60 usage_00224.pdb 1 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQ--NLDYAQGSPEELKETVRLVEEQG 58 KVAFITGAARGQGR HA LA GADI AID C Q P L ETVR VE G usage_00043.pdb 61 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 120 usage_00044.pdb 61 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 120 usage_00045.pdb 61 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 120 usage_00046.pdb 61 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 120 usage_00223.pdb 61 RRIIARQADVRDLASLQAVVDEALAEFGHIDILVS-NVGISNQGEVVSLTDQQWSDILQT 119 usage_00224.pdb 59 RRIIARQADVRDLASLQAVVDEALAEFGHIDILVS-NVGISNQGEVVSLTDQQWSDILQT 117 RRIIA Q DVRD QA VD G DI S W D usage_00043.pdb 121 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 180 usage_00044.pdb 121 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 180 usage_00045.pdb 121 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 180 usage_00046.pdb 121 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 180 usage_00223.pdb 120 NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANE 179 usage_00224.pdb 118 NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANE 177 NL GAW R P GGS F SS GLRGA Y ASKHG GLM A E usage_00043.pdb 181 LGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPA 240 usage_00044.pdb 181 LGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPA 240 usage_00045.pdb 181 LGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPA 240 usage_00046.pdb 181 LGPRNIRVNIVCPSSVATPMLLNEPTYRMFR-----PTVEDFQVASRQMHVLPIPYVEPA 235 usage_00223.pdb 180 VGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPE 239 usage_00224.pdb 178 VGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL---TREDAAELFSQLTLLPIPWVEPE 234 G NIRVN V P V T M LNE MF T ED Q LPIP VEP usage_00043.pdb 241 DISNAILFLVS 251 usage_00044.pdb 241 DISNAILFLVS 251 usage_00045.pdb 241 DISNAILFLVS 251 usage_00046.pdb 236 DISNAILFLVS 246 usage_00223.pdb 240 DVSNAVAWLAS 250 usage_00224.pdb 235 DVSNAVAWLAS 245 D SNA L S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################