################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:48 2021 # Report_file: c_0387_2.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00010.pdb # 8: usage_00012.pdb # 9: usage_00019.pdb # 10: usage_00021.pdb # 11: usage_00026.pdb # 12: usage_00027.pdb # 13: usage_00038.pdb # # Length: 102 # Identity: 4/102 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/102 ( 8.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/102 ( 32.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 HVTAYGPGL-THGVVNKPATFTVNTKD-------AGEGGLSLAIEG--P---SKAEISCT 47 usage_00002.pdb 1 -VTAYGPGL-THGVVNKPATFTVNTKD-------AGEGGLSLAIEG--P---SKAEISCT 46 usage_00004.pdb 1 -VKAHGPGL-EGGLVGKPAEFTIDTKG-------AGTGGLGLTVEG--P---CEAKIECS 46 usage_00005.pdb 1 -VVASGPGL-EHGKVGEAGLLSVDCSE-------AGPGALGLEAVSD-SG--TKAEVSIQ 48 usage_00006.pdb 1 -VKIAGPGLGSGVRARVLQSFTVDSSK-------AGLAPLEVRVLGPRG---LVEPVNVV 49 usage_00007.pdb 1 -CVLQGEDL-HRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPK-DKKDSPVRTMVQ 57 usage_00010.pdb 1 KVRAWGPGL-ETGQVGKSADFVVEAIG-------TEVGTLGFSIEG--P---SQAKIECD 47 usage_00012.pdb 1 ----------ERAEAGVPAEFSIWTRE-------AGAGGLAIAVEG--P---SKAEISFE 38 usage_00019.pdb 1 KVRAWGPGL-EGGVVGKSADFVVEAIG-------DDVGTLGFSVEG--P---SQAKIECD 47 usage_00021.pdb 1 -VSAYGAGL-EGGVTGNPAEFVVNTSN-------AGAGALSVTIDG--P---SKVKMDCQ 46 usage_00026.pdb 1 -VSAYGPGL-VYGVANKTATFTIVT------------GGLDLAIEG--P---SKAEISCI 41 usage_00027.pdb 1 -VTAYGPGL-THGVVNKPATFTVNTKD-------AGEGGLSLAIEG--P---SKAEISCT 46 usage_00038.pdb 1 -VRAGGPGL-ERAEAGVPAEFSIWTRE-------AGAGGLAIAVEG--P---SKAEISFE 46 f l usage_00001.pdb 48 DNQDGTCSVSYLPVLPGDYSILVKYNE-QHVPGSPFTARVT- 87 usage_00002.pdb 47 DNQDGTCSVSYLPVLPGDYSILVKYNE-QHVPGSPFTARVTG 87 usage_00004.pdb 47 DNGDGTCSVSYLPTKPGEYFVNILFEE-VHIPGSPFKADIEM 87 usage_00005.pdb 49 NNKDGTYAVTYVPLTAGMYTLTMKYGG-ELVPHFPARVKVEP 89 usage_00006.pdb 50 DNGDGTHTVTYTPSQEGPYMVSVKYAD-EEIPRSPFKVKVLP 90 usage_00007.pdb 58 DNKDGTYYISYTPKEPGVYTVWVCIKE-QHVQGSPFTVTVR- 97 usage_00010.pdb 48 DKGDGSCDVRYWPTEPGEYAVHVICDD-EDIRDSPFIAHILP 88 usage_00012.pdb 39 DRKDGSCGVAYVVQEPGDYEVSVKFNE-EHIPDSPFVVPVA- 78 usage_00019.pdb 48 DKGDGSCDVRYWPQEAGEYAVHVLCNS-EDIRLSPFMADIRD 88 usage_00021.pdb 47 EC-PEGYRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTG 87 usage_00026.pdb 42 DN-K-TCTVTYLPTLPGDYSILVKYND-KHIPGSPFTAKITD 80 usage_00027.pdb 47 DNQDGTCSVSYLPVLPGDYSILVKYNE-QHVPGSPFTAR--- 84 usage_00038.pdb 47 DRKDGSCGVAYVVQEPGDYEVSVKFNE-EHIPDSPFVVPVAS 87 v Y G Y sPf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################