################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:52 2021 # Report_file: c_0487_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00102.pdb # 3: usage_00160.pdb # 4: usage_00161.pdb # 5: usage_00165.pdb # 6: usage_00166.pdb # 7: usage_00246.pdb # # Length: 153 # Identity: 19/153 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/153 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/153 ( 40.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----SALLVREEGL-MQNCNQM---H----------DLSY-DTGDKALQCGRHVDVFKLW 41 usage_00102.pdb 1 ----SALLLQDTSNLLKRCHGSKFY-----------DVA-LDTGDKVVQCGRRVDCLKLW 44 usage_00160.pdb 1 --TCAMVLFRDAGV-LERAFRI---PAPNMR--ATDG--FINLGEIGVQGTRHADVVKLW 50 usage_00161.pdb 1 --TCAMVLFRDAGV-LERAFRI---P----------G--FINLGEIGVQGTRHADVVKLW 42 usage_00165.pdb 1 TC---AVLFRDAGV-LERAFRI---PA----YR--DG--FINLGEIGVQGTRHADVVKLW 45 usage_00166.pdb 1 TC---AVLFRDAGV-LERAFRI---PA----YRT-DG--FINLGEIGVQGTRHADVVKLW 46 usage_00246.pdb 1 --TCAMVLFRDAGV-LERAFRI---PAPQMR--A-DG--FINLGEIGVQGTRHADVVKLW 49 L rd g l r G vQ Rh Dv KLW usage_00003.pdb 42 LMWRAKGTTGFEAHVDKCLELAEYLYNIIKNREGYEMVFDGKPQHTNVCFWYIPPS---- 97 usage_00102.pdb 45 LMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVM-E-PEFVNVCFWFVPPS-LRG 101 usage_00160.pdb 51 LTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAG-E-IDTNIVCFRGEPDWL--- 105 usage_00161.pdb 43 LTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAG-E-IDTNIVCFRGEPDW---- 96 usage_00165.pdb 46 LTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAG-E-IDTNIVCFRGEPDWL--- 100 usage_00166.pdb 47 LTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAG-E-IDTNIVCFRGEPDWL--- 101 usage_00246.pdb 50 LTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAG-E-IDTNIVCFRGEPDWL--- 104 L G qG r iD LAe ve R l e VCF P usage_00003.pdb 98 -------------LRT-----------L----- 101 usage_00102.pdb 102 KQESPDYHERLSKVAPVLKERMVKEG------- 127 usage_00160.pdb 106 ------PAERWDDWNAALQALLLREGK------ 126 usage_00161.pdb 97 -------------L--------------PAERW 102 usage_00165.pdb 101 ------PAERWDDWNAALQAL------------ 115 usage_00166.pdb 102 ------PAERWDDWNAALQALLLREGK------ 122 usage_00246.pdb 105 ------PAERWDDWNAALQALLLREGK------ 125 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################