################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:53 2021 # Report_file: c_1023_174.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00321.pdb # 2: usage_00624.pdb # 3: usage_00770.pdb # 4: usage_00816.pdb # 5: usage_00817.pdb # 6: usage_01190.pdb # # Length: 88 # Identity: 19/ 88 ( 21.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 88 ( 33.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 88 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00321.pdb 1 -LWNLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCRRP 59 usage_00624.pdb 1 SMMNFLSNHDITRFATRSGGDLWKTYLALIFQMTYVGTPTIYYGDEYGMQGGADPDNRRS 60 usage_00770.pdb 1 --QNLLTSHDTPRLLSLR-GSVERARLALALLFLLPGNPTVYYGEEVG-AGGKDPENRGG 56 usage_00816.pdb 1 -LYNMLGSHDVPRIKSMV-QNNKLLKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRP 58 usage_00817.pdb 1 -LYNMLGSHDVPRIKSMV-QNNKLLKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRP 58 usage_01190.pdb 1 -LWNLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCRRP 59 N L sHD R L G P iYYGdE G G DPd Rr usage_00321.pdb 60 MIWEEKE--QNRGLFEFYKELIRLRH-- 83 usage_00624.pdb 61 FDWSQ-ATPS-NSAVALTQKLITIRNQY 86 usage_00770.pdb 57 -VWEEAR--WQKDLRETVKRLARLRKE- 80 usage_00816.pdb 59 MIWDRGN--WDLELYEHIKKLIRIYK-- 82 usage_00817.pdb 59 MIWDRGN--WDLELYEHIKKLIRIYK-- 82 usage_01190.pdb 60 MIWEEKE--QNRGLFEFYKELIRLRHR- 84 W l e k Lir #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################