################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:17 2021 # Report_file: c_1200_64.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00999.pdb # 2: usage_01613.pdb # 3: usage_01688.pdb # 4: usage_01761.pdb # 5: usage_01786.pdb # 6: usage_01966.pdb # 7: usage_03337.pdb # 8: usage_03819.pdb # 9: usage_03998.pdb # 10: usage_03999.pdb # 11: usage_04003.pdb # 12: usage_04363.pdb # 13: usage_04590.pdb # 14: usage_04591.pdb # 15: usage_04643.pdb # 16: usage_04824.pdb # 17: usage_04831.pdb # 18: usage_04832.pdb # 19: usage_05269.pdb # 20: usage_05308.pdb # 21: usage_05325.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 58 ( 5.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 58 ( 69.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00999.pdb 1 GDFIALDLG--------------GSSFRILRVQVNH---EKNQNV---HMES------ 32 usage_01613.pdb 1 GDFLSLDLG--------------GTNFRVMLVKVGE---W--------SVK------- 26 usage_01688.pdb 1 ---LSLDLG--------------GTNFRVMLVKVGEGEEG-QWSV---KTKHQMYS-- 35 usage_01761.pdb 1 ---IALDLG--------------GSSFRILRVQVNH---EKNQNV---HMESEVYD-- 33 usage_01786.pdb 1 NIRQGLDFGYG------------PDPLAFVRWHYDK---RKN-RIYA----------- 31 usage_01966.pdb 1 F--LAIDLG--------------GTNLRVVLVKLGG---D--RTF---DTTQSKYR-- 32 usage_03337.pdb 1 -PDFYPVPL--NSTNGLDTSVYGGS-VRHVMKAGFE------GHD---WYTI------ 39 usage_03819.pdb 1 F--LALDLG--------------GTNLRVVLVKLGG---N--HDF---DTTQNKYR-- 32 usage_03998.pdb 1 --FLALDLG--------------GTNFRVLWVKVTD---NGLQKV---EMENQIYA-- 34 usage_03999.pdb 1 --FLALDLG--------------GTNFRVLLVRVRN---GKWGGV---EMHNKIYAIP 36 usage_04003.pdb 1 GDFLALDLG--------------GTNFRVLLVRVRN---GG------VEMHN------ 29 usage_04363.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---GKKRTV---EMHNKIYA-- 36 usage_04590.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---RT-------VEMH------ 28 usage_04591.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---GKKRTV---EMHN------ 32 usage_04643.pdb 1 RNCVAVDLG--------------ASSGRVMLARYER---ECR-SLTL----------- 29 usage_04824.pdb 1 GDFLSLDLG--------------GTNFRVMLVKVGE---QW-------SVKT------ 28 usage_04831.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---GKKRTV---EMH------- 31 usage_04832.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---GKKRTV---EMH------- 31 usage_05269.pdb 1 GEFLALDLG--------------GTNFRVLWVKVTD---NGLQKV---EMENQIYA-- 36 usage_05308.pdb 1 GDFLALDLG--------------GTNFRVLLVKIRS---GKKRTV---EMHNKIYA-- 36 usage_05325.pdb 1 GDFIALDLG--------------GSSFRILRVQVNH---EKNQNV---HMES------ 32 d g r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################