################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:02 2021 # Report_file: c_1386_144.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00255.pdb # 2: usage_00260.pdb # 3: usage_00333.pdb # 4: usage_00913.pdb # 5: usage_01039.pdb # 6: usage_01256.pdb # 7: usage_01315.pdb # 8: usage_01335.pdb # # Length: 65 # Identity: 5/ 65 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 65 ( 9.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 65 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00255.pdb 1 -LNTIKKRLENK-YYAKASECIEDFNTMFSNCYLYNKPG----D-DIVLMAQALEKLFMQ 53 usage_00260.pdb 1 -LATMEERVQRR-YYEKLTEFVADMTKIFDNCRYYNPSD----S-PFYQCAEVLESFFVQ 53 usage_00333.pdb 1 -LETIRKNISKH-KYQSRESFLDDVNLILANSVKYNGPE----S-QYTKTAQEIVNICYQ 53 usage_00913.pdb 1 -LSSVISKIDLH-KYLTVKDYLRDIDLICSNALEYNPDRDPGDR-LIRHRACALRDTAYA 57 usage_01039.pdb 1 -LSTVKRKMDGR-EYPDAQGFAADVRLMFSNCYKYNPPD----H-EVVAMARKLQDVFEM 53 usage_01256.pdb 1 -LSTVKRKMDGR-EYPDAQGFAADVRLMFSNCYKYNPPD----H-EVVAMARKLQDVFEM 53 usage_01315.pdb 1 -YITISRNLSDG-IYKEPIDFYHDMKLIYKNCIDFNPDI-EE-NKYIIEAAKSSDMKFEF 56 usage_01335.pdb 1 SLRHILDNIVKGDTYSTALQVMEDVELIWKNCITFNGAN----S-LLATEAGKCRSALDR 55 l Y D N N A usage_00255.pdb 54 KLSQM 58 usage_00260.pdb 54 KLK-- 56 usage_00333.pdb 54 TITEY 58 usage_00913.pdb 58 IIKE- 61 usage_01039.pdb 54 RFAKM 58 usage_01256.pdb 54 RFAKM 58 usage_01315.pdb 57 LWNKW 61 usage_01335.pdb 56 IRRAY 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################