################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:44 2021 # Report_file: c_1156_134.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00120.pdb # 2: usage_00172.pdb # 3: usage_00194.pdb # 4: usage_01118.pdb # 5: usage_01119.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 52 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 52 ( 59.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 DAVHEVIPIDENSIEP---PPP-VTTIDTAFV-EGIAKTD-D-KMIIIIKL- 44 usage_00172.pdb 1 ----AHLNIGKGGVNL---S-N--QA-SGRTL--LVENLT------------ 27 usage_00194.pdb 1 -----VGTLDVGLIDSVCASDSP-------DRPNSFVIITANR-VLHCNAD- 38 usage_01118.pdb 1 ----GVLRITENQLDL---TNV-SDK-FGKKS-KGLVKTD-G-RLIIY---- 36 usage_01119.pdb 1 ----GVLRITENQLDL---TNVS-DK-FGKKS-KGLVKTD-G-RLIIYLDID 40 v i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################