################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:55 2021 # Report_file: c_0288_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00040.pdb # 2: usage_00092.pdb # 3: usage_00097.pdb # 4: usage_00117.pdb # 5: usage_00137.pdb # 6: usage_00224.pdb # 7: usage_00225.pdb # 8: usage_00235.pdb # 9: usage_00382.pdb # # Length: 133 # Identity: 15/133 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/133 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/133 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00092.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00097.pdb 1 --NNQTLA-NGATVTIYPTTTE----PTNYVVYLHGGGIYGT-KSDLPEELKELF-TSNG 51 usage_00117.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00137.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00224.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00225.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 usage_00235.pdb 1 -VTVELLDIKGVTVRKITPKSLSPEFKDHVYIDIHGGAYVLFAGLPS-IEEGILIAHRLG 58 usage_00382.pdb 1 DIQVEQVTVAGCAAEWVRAPGCQ---AGKAILYLHGGGYVMGSINTH-RSMVGEISRASQ 56 ve G ylHGGgyv i usage_00040.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00092.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00097.pdb 52 YTVLALDYLLAPNTKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYL-LQLTKQLQ 110 usage_00117.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00137.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00224.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00225.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 usage_00235.pdb 59 IVVYSVDYRMPPAYPFPAALDDVKHVYRVLSQ-QYDANHIFMGGTSAGGGLLLAFVQGLI 117 usage_00382.pdb 57 AAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSAR 116 l lDYrlaP pfpaa d yr L qh G SAGGgL La usage_00040.pdb 117 DQGLPMPASAIPI 129 usage_00092.pdb 117 DQGLPMPASAIPI 129 usage_00097.pdb 111 TLNLTPQFLVNF- 122 usage_00117.pdb 117 DQGLPMPASAIPI 129 usage_00137.pdb 117 DQGLPMPASAIPI 129 usage_00224.pdb 117 DQGLPMPASAIPI 129 usage_00225.pdb 117 DQGLPMPASAIPI 129 usage_00235.pdb 118 ENGVATPRAIYAG 130 usage_00382.pdb 117 DQGLPMPASAIPI 129 gl p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################