################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:58 2021 # Report_file: c_1264_21.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00042.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00225.pdb # 6: usage_00377.pdb # 7: usage_00523.pdb # 8: usage_00535.pdb # 9: usage_00536.pdb # 10: usage_00546.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 40 ( 77.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00043.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00044.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00045.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00225.pdb 1 ----R----HML-SPERSIEIQHLLGSDIVMA-------- 23 usage_00377.pdb 1 DGAAAALLM--------SEAEASRRGIQPLG--------- 23 usage_00523.pdb 1 ---------DDG--SRPVLEELKKHGVKYIA-LRC----- 23 usage_00535.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00536.pdb 1 ---------AIKRGADLIVEALEEYGTEQVV-G------- 23 usage_00546.pdb 1 ---------GLLPAELFAEAISQVAI---------AAGRD 22 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################