################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:00:26 2021 # Report_file: c_0817_3.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00120.pdb # 2: usage_00125.pdb # 3: usage_00126.pdb # 4: usage_00127.pdb # 5: usage_00128.pdb # 6: usage_00129.pdb # 7: usage_00130.pdb # 8: usage_00131.pdb # 9: usage_00132.pdb # 10: usage_00133.pdb # 11: usage_00134.pdb # 12: usage_00148.pdb # 13: usage_00216.pdb # 14: usage_00220.pdb # 15: usage_00224.pdb # 16: usage_00225.pdb # 17: usage_00232.pdb # 18: usage_00233.pdb # # Length: 85 # Identity: 29/ 85 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 85 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 85 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 TPLKMFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLTDDVRIKQC 60 usage_00125.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00126.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00127.pdb 1 --THMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 58 usage_00128.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00129.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00130.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00131.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00132.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00133.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00134.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00148.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00216.pdb 1 TPRRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQC 60 usage_00220.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 usage_00224.pdb 1 DAQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMC 59 usage_00225.pdb 1 DAQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMC 59 usage_00232.pdb 1 --THMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 58 usage_00233.pdb 1 -ATHMFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQC 59 F a FF S L FW Sml P VCH AWD DfRI C usage_00120.pdb 61 TRVTQDQLFTVHHELGHIQYFLQYQ 85 usage_00125.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00126.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQY- 83 usage_00127.pdb 59 TRVTMDQLSTVHHEMGHIQYYLQ-- 81 usage_00128.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQY- 83 usage_00129.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00130.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00131.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00132.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00133.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00134.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00148.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00216.pdb 61 TTVNLEDLVVAHHEMGHIQYFMQYK 85 usage_00220.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 usage_00224.pdb 60 TKVTMDDFLTAHHEMGHIQYDMAYA 84 usage_00225.pdb 60 TKVTMDDFLTAHHEMGHIQYDMAYA 84 usage_00232.pdb 59 TRVTMDQLSTVHHEMGHIQYYLQ-- 81 usage_00233.pdb 60 TRVTMDQLSTVHHEMGHIQYYLQ-- 82 T Vt d t HHEmGHIQY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################