################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:31 2021 # Report_file: c_1291_44.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00014.pdb # 3: usage_00029.pdb # 4: usage_00618.pdb # 5: usage_01080.pdb # 6: usage_01188.pdb # 7: usage_01344.pdb # 8: usage_01345.pdb # 9: usage_01531.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 39 ( 7.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 39 ( 41.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -----NHDEFKEMISRD-AFLEHAEV--FGNYYGTSRE- 30 usage_00014.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLAL-- 33 usage_00029.pdb 1 --EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLAL-- 32 usage_00618.pdb 1 GWEAFYHMYGDVR--PDLMY-VKLG-P---EQKLISE-E 31 usage_01080.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLALSD 35 usage_01188.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLALSD 35 usage_01344.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLAL-- 33 usage_01345.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLAL-- 33 usage_01531.pdb 1 S-EEEFQRLCDQLVEAG-TF-IRLNPEKH-KNSYLALSD 35 d f l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################