################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:32 2021 # Report_file: c_1230_63.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00092.pdb # 2: usage_00140.pdb # 3: usage_00416.pdb # 4: usage_00453.pdb # 5: usage_00463.pdb # 6: usage_00474.pdb # 7: usage_00556.pdb # 8: usage_00843.pdb # 9: usage_00844.pdb # 10: usage_00850.pdb # 11: usage_00862.pdb # 12: usage_00863.pdb # 13: usage_01173.pdb # 14: usage_01476.pdb # 15: usage_01479.pdb # 16: usage_01559.pdb # 17: usage_01614.pdb # # Length: 76 # Identity: 12/ 76 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 76 ( 18.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 76 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00092.pdb 1 KAFEIMRNVWIIPERNTIG--TDPS--DFDPPA--SLEN--GSSAYYDPNYLTTDAEKDR 52 usage_00140.pdb 1 KAFRITGNIWVIPDRFSRNSNP-----NLNKPP--RV-TS-PKSGYYDPNYLSTDSDKDT 51 usage_00416.pdb 1 KAFKITDRIWIIPERYTFG--YKPE--DFNKSSGIFN----RDVEYYDPDYLNTNDKKNI 52 usage_00453.pdb 1 KAFKVAPNIWVAPERYYG---E-----SLSIDE--EY-K--VDGGIYDSNFLSQDSEKDK 47 usage_00463.pdb 1 KAFKIHNKIWVIPERDTF---TNPEEGDLNPPP-EAK-Q--VPVSYYDSTYLSTDNEKDN 53 usage_00474.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT--SLKN--GDSSYYDPNYLQSDEEKDR 52 usage_00556.pdb 1 KAFKIHNKIWVIPERDTFT--NPE---EGDLNP-------PVPVSYYDSTYLSTDNEKDN 48 usage_00843.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT--SLKN--GDSSYYDPNYLQSDEEKDR 52 usage_00844.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT--SLKN--GDSSYYDPNYLQSDEEKDR 52 usage_00850.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT--SLKN--GDSSYYDPNYLQSDEEKDR 52 usage_00862.pdb 1 KAFEIMRNVWIIPERNTIG--TNPS--DFDPPA--SLKN--GSSAYYDPNYLTTDAEKDR 52 usage_00863.pdb 1 KAFEIMRNVWIIPERNTIG--TNPS--DFDPPA--SLKN--GSSAYYDPNYLTTDAEKDR 52 usage_01173.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT---K-N--GDSSYYDPNYLQSDEEKDR 50 usage_01476.pdb 1 KAFKVAPNIWVAPERYYG---E-----SLSIDE--EY-K--VDGGIYDSNFLSQDSEKDK 47 usage_01479.pdb 1 KSFNIMKNIWIIPERNVIG--TTPQ--DFHPPT--SLKN--GDSSYYDPNYLQSDEEKDR 52 usage_01559.pdb 1 KAFEIMRNVWIIPERNTIG--TNPS--DFDPPA--SLKN--GSSAYYDPNYLTTDAEKDR 52 usage_01614.pdb 1 KAFRITGNIWVIPDRFSRNSNP-----NLNKPP--RV-TS-PKSGYYDPNYLSTDSDKDT 51 K F W P R YD L d Kd usage_00092.pdb 53 YLKTTIKLFKRINS-- 66 usage_00140.pdb 52 FLKEIIKLFKRINS-- 65 usage_00416.pdb 53 FLQTMIKLFNRIKS-- 66 usage_00453.pdb 48 FLQAIITLLKRINSTN 63 usage_00463.pdb 54 YLKGVTKLFERIY--- 66 usage_00474.pdb 53 FLKIVTKIFNRINN-- 66 usage_00556.pdb 49 YLKGVTKLFERIYS-- 62 usage_00843.pdb 53 FLKIVTKIFNRIN--- 65 usage_00844.pdb 53 FLKIVTKIFNRINN-- 66 usage_00850.pdb 53 FLKIVTKIFNRINN-- 66 usage_00862.pdb 53 YLKTTIKLFKRINS-- 66 usage_00863.pdb 53 YLKTTIKLFKRINS-- 66 usage_01173.pdb 51 FLKIVTKIFNRI---- 62 usage_01476.pdb 48 FLQAIITLLKRINSTN 63 usage_01479.pdb 53 FLKIVTKIFNRINN-- 66 usage_01559.pdb 53 YLKTTIKLFKRINS-- 66 usage_01614.pdb 52 FLKEIIKLFKRINS-- 65 L RI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################