################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:40 2021 # Report_file: c_0640_6.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00003.pdb # 2: usage_00008.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00016.pdb # 6: usage_00023.pdb # 7: usage_00033.pdb # 8: usage_00036.pdb # 9: usage_00051.pdb # 10: usage_00052.pdb # 11: usage_00053.pdb # 12: usage_00074.pdb # 13: usage_00087.pdb # 14: usage_00094.pdb # 15: usage_00099.pdb # 16: usage_00100.pdb # 17: usage_00107.pdb # 18: usage_00115.pdb # 19: usage_00123.pdb # 20: usage_00128.pdb # # Length: 140 # Identity: 65/140 ( 46.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/140 ( 77.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/140 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00008.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00010.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00011.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00016.pdb 1 SAADKANVKAAWGKVGGQAGAHGAEALERMFLGFPTTKTYFPHF-NLSHGSDQVKAHGQK 59 usage_00023.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00033.pdb 1 SAADKSNVKACWGKIGSHAGEYGAEALERTFCSFPTTKTYFPHF-DLSHGSAQVKAHGQK 59 usage_00036.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00051.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00052.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00053.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00074.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00087.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00094.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00099.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00100.pdb 1 SDKDKDSIKAFWAKISPKAEDIGADALARMLTVYPQTKTYFSHWKDLSPGSAPVKKHGKT 60 usage_00107.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00115.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00123.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 usage_00128.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGKK 59 S aDK nvKA WgK g Ag GAeALeRmf fPtTKTYFpHf dLShGSaqVK HG k usage_00003.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00008.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00010.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00011.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00016.pdb 60 VADALTKAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHHPDDFNPSV 119 usage_00023.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00033.pdb 60 VADALTQAVAHMDDLPTAMSALSDLHAYKLRVDPVNFKFLSHCLLVTLACHHPAEFTPAV 119 usage_00036.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00051.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00052.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00053.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00074.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00087.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00094.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00099.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00100.pdb 61 VMGSVAEAVSKIDDLTNGLLTLSELHAFQLRVDPANFKILSHNLLVVLAQQFPNDFTPEV 120 usage_00107.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00115.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00123.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00128.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 Vadalt AV h DD p alsaLSdLHA kLRVDPvNFK LSHcLLVtLA h P FtP V usage_00003.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00008.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00010.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00011.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00016.pdb 120 HASLDKFLANVSTVLTSKYR 139 usage_00023.pdb 120 HASLDKFLASVSTVL----- 134 usage_00033.pdb 120 HASLDKFFSAVSTVL----- 134 usage_00036.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00051.pdb 120 HASLDKFLASVSTVL----- 134 usage_00052.pdb 120 HASLDKFLASVSTVL----- 134 usage_00053.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00074.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00087.pdb 120 HASLDKFLASVSTVLTSKFR 139 usage_00094.pdb 120 HASLDKFLASVSTVL----- 134 usage_00099.pdb 120 HASLDKFLASVSTVL----- 134 usage_00100.pdb 121 HVSMDKFLSLLSWSLS---- 136 usage_00107.pdb 120 HASLDKFLASVSTVL----- 134 usage_00115.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00123.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00128.pdb 120 HASLDKFLASVSTVLTS--- 136 HaSlDKFl vStvL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################