################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:55 2021 # Report_file: c_1208_117.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00349.pdb # 2: usage_00350.pdb # 3: usage_00351.pdb # 4: usage_01044.pdb # 5: usage_01108.pdb # 6: usage_01610.pdb # 7: usage_01611.pdb # 8: usage_01785.pdb # 9: usage_02033.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 79 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/ 79 ( 88.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00349.pdb 1 --GILTCHEDV--L--------------TDTYVYT-F-E------PSQAP-------GRF 27 usage_00350.pdb 1 --GILTCHEDV--L--------------TDTYVYT-F-E------PSQAP-------GRF 27 usage_00351.pdb 1 --GILTCHEDV--L--------------TDTYVYT-F-E------PSQAP-------GRF 27 usage_01044.pdb 1 RARPCRVSTADRK---------------VRKGIMAH-----------------------S 22 usage_01108.pdb 1 ----TGATTQD---AEVDDA--------KYGFV---A-S------GT------------- 22 usage_01610.pdb 1 --GILTCHEDV--L--------------NETYVYS-F-E------PTQTP-------GRF 27 usage_01611.pdb 1 --GILTCHEDV--L--------------NETYVYS-F-E------PTQTP-------GRF 27 usage_01785.pdb 1 -GIKCFAVR-------------------SLGWVEM-TEEELAPGR------------SSV 27 usage_02033.pdb 1 -----ELVRIT---------DPANPLVHTYRAGH--S-F-----------ATSLRGLRNT 32 usage_00349.pdb 28 SHS-LRDALGQ-------- 37 usage_00350.pdb 28 SHS-LRDALGQ-------- 37 usage_00351.pdb 28 SHS-LRDALGQ-------- 37 usage_01044.pdb 23 LED-LLNK----------- 29 usage_01108.pdb 23 ---LNPQKARVLLQLALTQ 38 usage_01610.pdb 28 SLG-LRDALG--------- 36 usage_01611.pdb 28 SLG-LRDALGQYF------ 39 usage_01785.pdb 28 AVN-NCIRQL--------- 36 usage_02033.pdb 33 LKH---------------- 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################