################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:39 2021 # Report_file: c_0407_18.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00113.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00171.pdb # 5: usage_00181.pdb # # Length: 87 # Identity: 22/ 87 ( 25.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 87 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 87 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 DNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESE 60 usage_00114.pdb 1 DNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESE 60 usage_00115.pdb 1 --EPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESE 58 usage_00171.pdb 1 --APTFHNQPYSVRIPENTPVGTPIFIVNATDPDL---GAGGSVLYSFQPPSPFFAIDSA 55 usage_00181.pdb 1 --PPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQ 58 P F Y a vPE VGT v qVtAtDaDd GnsakvvYSil gqPyFsves usage_00113.pdb 61 TGIIKTALLNMDR--REQYQVVIQAKD 85 usage_00114.pdb 61 TGIIKTALLN-----REQYQVVIQAKD 82 usage_00115.pdb 59 TGIIKTALLN-----REQYQVVIQAKD 80 usage_00171.pdb 56 RGIVTVIQEL-DYEVTQAYQLTVNATD 81 usage_00181.pdb 59 TGIIRTALPNMDREAKEEYHVVIQAKD 85 tGIi tal n e YqvviqAkD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################