################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:14 2021 # Report_file: c_0385_56.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00446.pdb # 4: usage_00562.pdb # # Length: 90 # Identity: 24/ 90 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 90 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 90 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHG-ESG---SMAVFHQT--QGPSYS- 52 usage_00019.pdb 1 -QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHG-ESG---SMAVFHQT--QGPSYS- 52 usage_00446.pdb 1 PEVRGRLGGTVELPCHLLPPTT-ERV-SQVTWQRLDG------TVVAAFHP-SFGVDFPN 51 usage_00562.pdb 1 PEVRGQLGGTVELPCHLLPPVPGLYI-SLVTWQRPD-AP-ANHQ-NVAAFHPKMGPSFPS 56 V G LG V LPC L P Sq TW R v Gps usage_00018.pdb 53 E--S-KRLEFVA-ARLGA-ELRDASLRMFG 77 usage_00019.pdb 53 E--S-KRLEFVA-ARLGA-ELRDASLRMFG 77 usage_00446.pdb 52 SQFSKDRLSFVRARPETNADLRDATLAFRG 81 usage_00562.pdb 57 PKPGSERLSFVSAKQSEA-ELQDATLALHG 85 s RL FV a eLrDA L G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################