################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 12:28:15 2021 # Report_file: c_1240_123.html ################################################################################################ #==================================== # Aligned_structures: 92 # 1: usage_00047.pdb # 2: usage_00051.pdb # 3: usage_00052.pdb # 4: usage_00132.pdb # 5: usage_00153.pdb # 6: usage_00154.pdb # 7: usage_00155.pdb # 8: usage_00156.pdb # 9: usage_00157.pdb # 10: usage_00158.pdb # 11: usage_00159.pdb # 12: usage_00160.pdb # 13: usage_00161.pdb # 14: usage_00177.pdb # 15: usage_00178.pdb # 16: usage_00273.pdb # 17: usage_00289.pdb # 18: usage_00299.pdb # 19: usage_00310.pdb # 20: usage_00315.pdb # 21: usage_00316.pdb # 22: usage_00419.pdb # 23: usage_00420.pdb # 24: usage_00421.pdb # 25: usage_00495.pdb # 26: usage_00510.pdb # 27: usage_00544.pdb # 28: usage_00545.pdb # 29: usage_00546.pdb # 30: usage_00547.pdb # 31: usage_00548.pdb # 32: usage_00549.pdb # 33: usage_00550.pdb # 34: usage_00575.pdb # 35: usage_00600.pdb # 36: usage_00636.pdb # 37: usage_00702.pdb # 38: usage_00918.pdb # 39: usage_00942.pdb # 40: usage_00943.pdb # 41: usage_00993.pdb # 42: usage_01048.pdb # 43: usage_01056.pdb # 44: usage_01082.pdb # 45: usage_01083.pdb # 46: usage_01188.pdb # 47: usage_01189.pdb # 48: usage_01190.pdb # 49: usage_01191.pdb # 50: usage_01192.pdb # 51: usage_01353.pdb # 52: usage_01419.pdb # 53: usage_01420.pdb # 54: usage_01421.pdb # 55: usage_01422.pdb # 56: usage_01423.pdb # 57: usage_01424.pdb # 58: usage_01425.pdb # 59: usage_01426.pdb # 60: usage_01427.pdb # 61: usage_01428.pdb # 62: usage_01459.pdb # 63: usage_01460.pdb # 64: usage_01461.pdb # 65: usage_01462.pdb # 66: usage_01463.pdb # 67: usage_01464.pdb # 68: usage_01465.pdb # 69: usage_01466.pdb # 70: usage_01467.pdb # 71: usage_01483.pdb # 72: usage_01502.pdb # 73: usage_01584.pdb # 74: usage_01586.pdb # 75: usage_01606.pdb # 76: usage_01728.pdb # 77: usage_01729.pdb # 78: usage_01730.pdb # 79: usage_01731.pdb # 80: usage_01837.pdb # 81: usage_01875.pdb # 82: usage_01876.pdb # 83: usage_01927.pdb # 84: usage_01936.pdb # 85: usage_01960.pdb # 86: usage_02087.pdb # 87: usage_02088.pdb # 88: usage_02089.pdb # 89: usage_02090.pdb # 90: usage_02100.pdb # 91: usage_02197.pdb # 92: usage_02198.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 51 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 51 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 -NVVLSGGTTM-FP-GIADRMNKELTALAP----STMKIK-----IIA--- 36 usage_00051.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00052.pdb 1 -NVVLSGGTTM-FP-GIADRMNKELTALAP----STMKIK-----IIA--- 36 usage_00132.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00153.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00154.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00155.pdb 1 ANNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 37 usage_00156.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00157.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00158.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00159.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00160.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00161.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00177.pdb 1 -HIVLSGGSTM-YP-GLPSRLERELKQLYLERVLKGDVEKLSKFKI----- 43 usage_00178.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00273.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00289.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00299.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00310.pdb 1 -NTVLSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00315.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_00316.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAPP- 37 usage_00419.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00420.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00421.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00495.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00510.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00544.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00545.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00546.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00547.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00548.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00549.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00550.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00575.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00600.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00636.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00702.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00918.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_00942.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_00943.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 35 usage_00993.pdb 1 -NTVLSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01048.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01056.pdb 1 -ACQFGGETVKKMSIASRMTMTNMAIEMG-----GKTGII-----E----- 35 usage_01082.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01083.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01188.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_01189.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_01190.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_01191.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_01192.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAP-- 36 usage_01353.pdb 1 -NIVMSGGTTM-FP-GIAERMQKELTALAP----SSMKVK-----ISA--- 36 usage_01419.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01420.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01421.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01422.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01423.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01424.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01425.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01426.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01427.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01428.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01459.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01460.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01461.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01462.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01463.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01464.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIAPPE 38 usage_01465.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01466.pdb 1 --NVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 35 usage_01467.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01483.pdb 1 ANNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 37 usage_01502.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01584.pdb 1 -NVVLSGGTTM-FP-GIADRMNKELTALAP----STMKIK-----IIA--- 36 usage_01586.pdb 1 -NVVLSGGTTM-FP-GIADRMNKELTALAP----STMKIK-----IIA--- 36 usage_01606.pdb 1 -NTVMSGGTTM-YP-GIADRMQKEITALAP----STIKTK-----IIA--- 36 usage_01728.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01729.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01730.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01731.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01837.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01875.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01876.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01927.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01936.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_01960.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02087.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02088.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02089.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02090.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02100.pdb 1 -NNVMSGGTTM-YP-GIADRMQKEITALAP----STMKIK-----IIA--- 36 usage_02197.pdb 1 -NIVMSGGTTM-FP-GIAERMQKEITALAP----SSMKVK-----IIA--- 36 usage_02198.pdb 1 -NIVMSGGTTM-FP-GIAERMQKEITALAP----SSMKVK-----IIA--- 36 v sGgttm p g rm e l k i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################