################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:26 2021 # Report_file: c_0074_6.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00043.pdb # 6: usage_00046.pdb # 7: usage_00072.pdb # 8: usage_00075.pdb # 9: usage_00076.pdb # 10: usage_00108.pdb # 11: usage_00109.pdb # # Length: 262 # Identity: 84/262 ( 32.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 128/262 ( 48.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/262 ( 5.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 -FIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNI 59 usage_00029.pdb 1 -FIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNI 59 usage_00030.pdb 1 -FIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNI 59 usage_00031.pdb 1 -FIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNI 59 usage_00043.pdb 1 DFKWGFATAAYQIEGSVNEDGRGPSIWDTFCA-IPGKIADGSSGAVACDSYKRTKEDIAL 59 usage_00046.pdb 1 GFVFGAASSAYQFEGAAKEGGKGPNIWDTFTHEFPGKISNGSTGDVADDFYHRYKEDVKV 60 usage_00072.pdb 1 DFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKI 60 usage_00075.pdb 1 DFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKI 60 usage_00076.pdb 1 -FIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKI 59 usage_00108.pdb 1 GFVFGAASSAYQFEGAAKEGGKGPNIWDTFTHEFPGKISNGSTGDVADDFYHRYKEDVKV 60 usage_00109.pdb 1 GFVFGAASSAYQFEGAAKEGGKGPNIWDTFTHEFPGKISNGSTGDVADDFYHRYKEDVKV 60 F G sAYQ EG g GP IWDTFt P I G G A Yh yKED usage_00028.pdb 60 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 119 usage_00029.pdb 60 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 119 usage_00030.pdb 60 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 119 usage_00031.pdb 60 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 119 usage_00043.pdb 60 LKELGANSYRFSISWSRIIPLGGRNDPINQKGIDHYVKFVDDLIEAGITPFITLFHWDLP 119 usage_00046.pdb 61 LKFIGLDGFRMSISWARVLPRGKLSGGVNKEGIAFYNNVINDLLSKGIQPFITIFHWDLP 120 usage_00072.pdb 61 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 120 usage_00075.pdb 61 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 120 usage_00076.pdb 60 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 119 usage_00108.pdb 61 LKFIGLDGFRMSISWARVLPRGKLSGGVNKEGIAFYNNVINDLLSKGIQPFITIFHWDLP 120 usage_00109.pdb 61 LKFIGLDGFRMSISWARVLPRGKLSGGVNKEGIAFYNNVINDLLSKGIQPFITIFHWDLP 120 K Gl R SISW RvlP G l gvNk G Y i Ll GI P T FHWD P usage_00028.pdb 120 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 179 usage_00029.pdb 120 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 179 usage_00030.pdb 120 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 179 usage_00031.pdb 120 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 179 usage_00043.pdb 120 DALDKRYGGFLNKEEFAADFENYARIMFKAIPKCKHWITFNEPWCSAILGYNTGYFAPGH 179 usage_00046.pdb 121 QALEDEYGGFLSPHIVNDFRDFAELCFKEFGDRVKHWITMNEPWSYSYGGYDAGLLAPGR 180 usage_00072.pdb 121 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 180 usage_00075.pdb 121 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 180 usage_00076.pdb 120 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 179 usage_00108.pdb 121 QALEDEYGGFLSPHIVNDFRDFAELCFKEFGDRVKHWITMNEPWSYSYGGYDAGLLAPGR 180 usage_00109.pdb 121 QALEDEYGGFLSPHIVNDFRDFAELCFKEFGDRVKHWITMNEPWSYSYGGYDAGLLAPGR 180 qALedeYGGFLs iv df ae cf efgd K W T N P GY G APGr usage_00028.pdb 180 G-RS-------TGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEP 231 usage_00029.pdb 180 G-RS-------TGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEP 231 usage_00030.pdb 180 G-RS-------TGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEP 231 usage_00031.pdb 180 G-RS-------TGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEP 231 usage_00043.pdb 180 TSD-R--SKSPVGDSAREPWIVGHNILIAHARAVKAYREDFKPTQGGEIGITLNGDATLP 236 usage_00046.pdb 181 CSA--FMAFCPKGNSGTEPYIVTHNLLLSHAAAVKLYKEKYQAYQKGQIGITLVTYWMIP 238 usage_00072.pdb 181 G-G-----KGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEP 234 usage_00075.pdb 181 G-G-----KGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEP 234 usage_00076.pdb 180 G-G-----KGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEP 233 usage_00108.pdb 181 CSA--FMAFCPKGNSGTEPYIVTHNLLLSHAAAVKLYKEKYQAYQKGQIGITLVTYWMIP 238 usage_00109.pdb 181 CSA--FMAFCPKGNSGTEPYIVTHNLLLSHAAAVKLYKEKYQAYQKGQIGITLVTYWMIP 238 G EPy VtH Ll H aAV Y k q Q G IGI wm P usage_00028.pdb 232 WDENSASDVEAAARALDFM--- 250 usage_00029.pdb 232 WDENSASDVEAAARALDFM--- 250 usage_00030.pdb 232 WDENSASDVEAAARALDFM--- 250 usage_00031.pdb 232 WDENSASDVEAAARALDFM--- 250 usage_00043.pdb 237 WDPEDPADIEACDRKIEFA--- 255 usage_00046.pdb 239 YSN-SKADKDAAQRALDFMYG- 258 usage_00072.pdb 235 LSD-VQADIDAQKRALDFMLGW 255 usage_00075.pdb 235 LSD-VQADIDAQKRALDFM--- 252 usage_00076.pdb 234 LSD-VQADIDAQKRALDFMLGW 254 usage_00108.pdb 239 YSN-SKADKDAAQRALDFM--- 256 usage_00109.pdb 239 YSN-SKADKDAAQRALDFM--- 256 D A RaldFm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. 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