################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:29 2021 # Report_file: c_0004_26.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00348.pdb # 2: usage_00349.pdb # 3: usage_00350.pdb # 4: usage_00351.pdb # 5: usage_00352.pdb # 6: usage_00353.pdb # 7: usage_00354.pdb # 8: usage_00355.pdb # 9: usage_00356.pdb # 10: usage_00357.pdb # # Length: 322 # Identity: 184/322 ( 57.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 184/322 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 138/322 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00348.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00349.pdb 1 AFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAIC 60 usage_00350.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00351.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00352.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00353.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00354.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00355.pdb 1 AFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAIC 60 usage_00356.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 usage_00357.pdb 1 -----------------------------------------------SEHPLLDTPVAIC 13 SEHPLLDTPVAIC usage_00348.pdb 14 SYI-------LPALAVAAGSHIYIYRNLRPYYKFVLP-----------------TVITCM 49 usage_00349.pdb 61 SY---------PALAVAAGSHIYIYRNLRPYYKFVLPP---------------ETVITCM 96 usage_00350.pdb 14 SYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEE--------TTVITCM 65 usage_00351.pdb 14 SYI-------LPALAVAAGSHIYIYRNLRPYYKFVLPP---------------ETVITCM 51 usage_00352.pdb 14 SY---------PALAVAAGSHIYIYRNLRPYYKFVLPP---------------ETVITCM 49 usage_00353.pdb 14 SYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEE--------TTVITCM 65 usage_00354.pdb 14 SYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEEQQGQPLVATTVITCM 73 usage_00355.pdb 61 SYI-------LPALAVAAGSHIYIYRNLRPYYKFVLP-----------------TVITCM 96 usage_00356.pdb 14 SY---------PALAVAAGSHIYIYRNLRPYYKFVLPP---------------ETVITCM 49 usage_00357.pdb 14 SYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEE--------TTVITCM 65 SY PALAVAAGSHIYIYRNLRPYYKFVLP TVITCM usage_00348.pdb 50 DVVKQAIDEPDAVSCLVVGTESGRILILNP---AIVKNIWVGITPAMIAVQGEL---YRI 103 usage_00349.pdb 97 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 156 usage_00350.pdb 66 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 125 usage_00351.pdb 52 DVVKQAI-----VSCLVVGTESGRILILNPA--AIVKNIWVGITPAMIAVQGELDVGYRI 104 usage_00352.pdb 50 DVVKQAI-----VSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 104 usage_00353.pdb 66 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 125 usage_00354.pdb 74 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 133 usage_00355.pdb 97 DVVKQAIDEPDAVSCLVVGTESGRILILNPA--AIVKNIWVGITPAMIAVQGELDVGYRI 154 usage_00356.pdb 50 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 109 usage_00357.pdb 66 DVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRI 125 DVVKQAI VSCLVVGTESGRILILNP AIVKNIWVGITPAMIAVQGEL YRI usage_00348.pdb 104 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 163 usage_00349.pdb 157 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 216 usage_00350.pdb 126 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 185 usage_00351.pdb 105 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 164 usage_00352.pdb 105 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 164 usage_00353.pdb 126 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 185 usage_00354.pdb 134 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 193 usage_00355.pdb 155 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 214 usage_00356.pdb 110 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 169 usage_00357.pdb 126 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL 185 TVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSL usage_00348.pdb 164 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 223 usage_00349.pdb 217 YLPCHILAMQRMEVTGQRNTKALIVALS-------------------------------- 244 usage_00350.pdb 186 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 245 usage_00351.pdb 165 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 224 usage_00352.pdb 165 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 224 usage_00353.pdb 186 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 245 usage_00354.pdb 194 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 253 usage_00355.pdb 215 YLPCHILAMQRMEVTGQRNTKALIVALSNG------------------------------ 244 usage_00356.pdb 170 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 229 usage_00357.pdb 186 YLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGR 245 YLPCHILAMQRMEVTGQRNTKALIVALS usage_00348.pdb 224 EDNTLLAITKSGALDIKM---- 241 usage_00349.pdb ---------------------- usage_00350.pdb 246 EDNTLLAITKSGALDIKMLPRT 267 usage_00351.pdb 225 EDNTLLAITKSGALDIKM---- 242 usage_00352.pdb 225 EDNTLLAITKSGALDIKM---- 242 usage_00353.pdb 246 EDNTLLAITKSGALDIKM---- 263 usage_00354.pdb 254 EDNTLLAITKSGALDIKM---- 271 usage_00355.pdb 245 ------------EVRVYN---- 250 usage_00356.pdb 230 EDNTLLAITKSGALDIKM---- 247 usage_00357.pdb 246 EDNTLLAITKSGALDIKM---- 263 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################