################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:28 2021 # Report_file: c_0177_23.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00036.pdb # 2: usage_00248.pdb # 3: usage_00257.pdb # 4: usage_00260.pdb # 5: usage_00261.pdb # # Length: 176 # Identity: 31/176 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/176 ( 52.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/176 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 RTAFVMGASQGIGKAIALKLADQHFSLVINSRN-LDNIESVKEDILAKHPEASVIVLAGD 59 usage_00248.pdb 1 KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFG-VKAYYLNAD 59 usage_00257.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFG-VKAYYLNAD 58 usage_00260.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGAD 59 usage_00261.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGAD 59 AvVtGstsGIGl At LA gad V Ngfg IE r l g vk y aD usage_00036.pdb 60 MSDQHTRAGIFQKIESQCGRLDVLINNIPGGAPDTFDNCNIEDMTATFTQKTVAYIDAIK 119 usage_00248.pdb 60 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 119 usage_00257.pdb 59 LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 118 usage_00260.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 119 usage_00261.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 119 lS a r a G DiLvNNagiqhta ie fp kw Ai alnlsAvfhgta usage_00036.pdb 120 RASSLMKQNEFGRIINIVGNLWKEPG---------ANMF----------------- 149 usage_00248.pdb 120 AALPIMQKQGWGRIINIASA-H----GLVASVNKSAYVAAKHGVVGLTKVTALEN- 169 usage_00257.pdb 119 AALPIMQKQGWGRIINIASA-H----GLVASVNKSAYVAAKHGVVGLTKVTALENA 169 usage_00260.pdb 120 AALPHMKKQGFGRIINIASA-H----GLVASANKSAY------------------- 151 usage_00261.pdb 120 AALPHMKKQGFGRIINIASA-H----GLVASANKSAYVAAKHGVVGFTKVTALET- 169 aAlp M kqg GRIINIasa h Ay #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################