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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:22:13 2021
# Report_file: c_0320_3.html
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#====================================
# Aligned_structures: 6
#   1: usage_00009.pdb
#   2: usage_00010.pdb
#   3: usage_00011.pdb
#   4: usage_00059.pdb
#   5: usage_00072.pdb
#   6: usage_00073.pdb
#
# Length:        124
# Identity:      102/124 ( 82.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    102/124 ( 82.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           10/124 (  8.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00009.pdb         1  DLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSL   60
usage_00010.pdb         1  DLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSL   60
usage_00011.pdb         1  DLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSL   60
usage_00059.pdb         1  DLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSL   60
usage_00072.pdb         1  --NCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELGLINNWLLHIRDIWLKHSSL   58
usage_00073.pdb         1  --NCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELGLINNWLLHIRDIWLKHSSL   58
                             NCLSVVQYAVDVLEVEHIIICGH GCGG  AAVENPELGLINNWLLHIRDIW KHSSL

usage_00009.pdb        61  LGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDV  120
usage_00010.pdb        61  LGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLD-  119
usage_00011.pdb        61  LGE-PQERRLDTLCELNV-EQVYNLGHSTI-QSAWKRGQKVTIHGWAYGIHDGLLRDLDV  117
usage_00059.pdb        61  LGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDV  120
usage_00072.pdb        59  LGKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQNVTIHGWAYSINDGLLRDLD-  117
usage_00073.pdb        59  LGKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQNVTIHGWAYSINDGLLRDLD-  117
                           LG  P E RLD L ELNV EQVYNLGHSTI QSAWKRGQ VTIHGWAY I DGLLRDLD 

usage_00009.pdb       121  TATN  124
usage_00010.pdb            ----     
usage_00011.pdb       118  TATN  121
usage_00059.pdb       121  TATN  124
usage_00072.pdb            ----     
usage_00073.pdb            ----     
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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