################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:32 2021 # Report_file: c_0293_24.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00299.pdb # 2: usage_00408.pdb # 3: usage_00463.pdb # # Length: 130 # Identity: 121/130 ( 93.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/130 ( 93.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/130 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00299.pdb 1 GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 60 usage_00408.pdb 1 GKVLQIFNKRTQEKFALK-LQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 59 usage_00463.pdb 1 -KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 59 KVLQIFNKRTQEKFALK LQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL usage_00299.pdb 61 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 120 usage_00408.pdb 60 IV-ECLDGGELFSRIQDR----FTEREASEI-KSIGEAIQYLHSINIAHRDVKPENLLYT 113 usage_00463.pdb 60 IVMECLDGGELFSRIQDA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 115 IV ECLDGGELFSRIQDr FTEREASEI KSIGEAIQYLHSINIAHRDVKPENLLYT usage_00299.pdb 121 SKRPNAILKL 130 usage_00408.pdb 114 SKRPNAILKL 123 usage_00463.pdb 116 SKRPNAILKL 125 SKRPNAILKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################