################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:43 2021 # Report_file: c_1477_132.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00163.pdb # 2: usage_00269.pdb # 3: usage_00319.pdb # 4: usage_00383.pdb # 5: usage_00942.pdb # 6: usage_00980.pdb # 7: usage_00981.pdb # 8: usage_01194.pdb # 9: usage_01214.pdb # 10: usage_01312.pdb # 11: usage_01346.pdb # 12: usage_01393.pdb # # Length: 45 # Identity: 5/ 45 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 45 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 45 ( 55.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELVKMM- 38 usage_00269.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVS------------- 26 usage_00319.pdb 1 GSATL----HRHFP--SRWGLLQAVFQERVAQLCDEARSLAAE-- 37 usage_00383.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELV---- 35 usage_00942.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELVKMM- 38 usage_00980.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVS------------- 26 usage_00981.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELVKMM- 38 usage_01194.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQE------ 33 usage_01214.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELVKM-- 37 usage_01312.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVSFTRDIQELVKMMS 39 usage_01346.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVS------------- 26 usage_01393.pdb 1 -----KPWSQGK-LSNQQWEKLQHMFQVYRVS------------- 26 qgk l qqWekLQhmFQvyrvs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################