################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:17:31 2021 # Report_file: c_1169_53.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00026.pdb # 2: usage_00043.pdb # 3: usage_00243.pdb # 4: usage_00265.pdb # 5: usage_00295.pdb # 6: usage_00296.pdb # 7: usage_00335.pdb # 8: usage_00514.pdb # 9: usage_00568.pdb # 10: usage_00662.pdb # 11: usage_00946.pdb # 12: usage_00978.pdb # 13: usage_01002.pdb # 14: usage_01106.pdb # 15: usage_01128.pdb # 16: usage_01129.pdb # 17: usage_01212.pdb # 18: usage_01289.pdb # 19: usage_01291.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 66 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 66 ( 89.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00043.pdb 1 -----D-QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 28 usage_00243.pdb 1 -----D-QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 28 usage_00265.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00295.pdb 1 -------QVMVTTNQ------E---------GLKFVKVRMRS-----------TRIPQIG 27 usage_00296.pdb 1 -------QVMVTTNQ------E---------GLKFVKVRMRS-----------TRIPQIG 27 usage_00335.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00514.pdb 1 ------Q-ILVGSTV------EDLKVQSRTTVESTGKV-----------------IK--- 27 usage_00568.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00662.pdb 1 -----D-QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 28 usage_00946.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00978.pdb 1 -------GSVNFGST-STDFQL---------Q-QPTKF-TPV-----------GIKIES- 29 usage_01002.pdb 1 --------VNLIGDEQ-----E---------L-QTVSIKYRI-----------RRTPQIG 26 usage_01106.pdb 1 --------------------------------QHISIIEVDENGKVVGYKDYTITGI--Q 26 usage_01128.pdb 1 ETGIVD-QVMVTLNQ------E---------GYKFCKIRVRS-----------VRIPQIG 33 usage_01129.pdb 1 ETGIVD-QVMVTLNQ------E---------GYKFCKIRVRS-----------VRIPQIG 33 usage_01212.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_01289.pdb 1 -----D-QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 28 usage_01291.pdb 1 -------QVLVTTNQ------D---------GLKFVKVRVRT-----------TKIPQIG 27 usage_00026.pdb 28 DKFAS- 32 usage_00043.pdb 29 DKFAS- 33 usage_00243.pdb 29 DKFASR 34 usage_00265.pdb 28 DKFASR 33 usage_00295.pdb 28 DKFAS- 32 usage_00296.pdb 28 DKFAS- 32 usage_00335.pdb 28 DKFAS- 32 usage_00514.pdb ------ usage_00568.pdb 28 DKFAS- 32 usage_00662.pdb 29 DKFAS- 33 usage_00946.pdb 28 DKFAS- 32 usage_00978.pdb ------ usage_01002.pdb 27 DKFSS- 31 usage_01106.pdb 27 IGTKS- 31 usage_01128.pdb 34 DKFAS- 38 usage_01129.pdb 34 DKFAS- 38 usage_01212.pdb 28 DKFASR 33 usage_01289.pdb 29 DKFAS- 33 usage_01291.pdb 28 DKFAS- 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################