################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:42 2021 # Report_file: c_1055_87.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00098.pdb # 2: usage_00394.pdb # 3: usage_00455.pdb # 4: usage_00456.pdb # 5: usage_00457.pdb # 6: usage_00649.pdb # 7: usage_00652.pdb # 8: usage_01058.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 51 ( 9.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 51 ( 29.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 -AEMFKDAVKGLRGFS---APTMVSFGENLPMKIDVEAVSGGHMIFWIA-- 45 usage_00394.pdb 1 --DYL---KDMNK-AIPTDAEVTVELGEEFPVKLHYQIAEG-MGTITYMLA 44 usage_00455.pdb 1 --------ISLTK-LS---DYVKVAFADQKPMQLEFNMEGGGKVTYLLA-- 37 usage_00456.pdb 1 --------ISLTK-LS---DYVKVAFADQKPMQLEFNMEGGGKVTYLLA-- 37 usage_00457.pdb 1 --------ISLTK-LS---DYVKVAFADQKPMQLEFNMEGGGKVTYLLA-- 37 usage_00649.pdb 1 -IEVLKDVFKVTS-IS---QNVTVGFGNNIPMKIEVPTDSGGQLIFWIA-- 44 usage_00652.pdb 1 -LEYVVNTSKMRK-PS---DTVEIAFGSQIPLKLRYNLPQGGYADFYIA-- 44 usage_01058.pdb 1 GVAYL---EDILR-SLADADEVIIRFGFDIPLLLKYMVRDAGEVSFLIA-- 45 v f P g a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################