################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:59 2021 # Report_file: c_0308_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00034.pdb # 4: usage_00035.pdb # 5: usage_00036.pdb # 6: usage_00037.pdb # 7: usage_00038.pdb # 8: usage_00039.pdb # 9: usage_00048.pdb # 10: usage_00049.pdb # 11: usage_00074.pdb # # Length: 122 # Identity: 11/122 ( 9.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/122 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/122 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMP 60 usage_00012.pdb 1 ADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMP 60 usage_00034.pdb 1 ADQARELINSWVETQTNGVIKNFLQPGSVDPQTEMVLVDAIYFKGTWEKAFKDEDTQEVP 60 usage_00035.pdb 1 ADQARELINSWVESQTNGIIRNVLQP-SVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMP 59 usage_00036.pdb 1 ADQARELINSWVESQTNGIIRNVLQP-SVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMP 59 usage_00037.pdb 1 -PAFISKTNNHIMKLTKGLIKDALE--NIDPATQMMILNCIYFKGSWVNKFPVEMTHNHN 57 usage_00038.pdb 1 ADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKTFKDEDTQAMP 60 usage_00039.pdb 1 ADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKTFKDEDTQAMP 60 usage_00048.pdb 1 PEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEK 60 usage_00049.pdb 1 PEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEK 60 usage_00074.pdb 1 -----QSINEWAAQTTDGKLPEVTK--D----DGALLVNAMFFKPHWDEKFHHKMVDNRG 49 iN w T i t lvnai FKg W F e t usage_00011.pdb 61 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLES 120 usage_00012.pdb 61 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLES 120 usage_00034.pdb 61 FRITEQESKPVQMMYQAGSFKVATVAAEKMKILELPYASGELSMFVLLPDDISGLEQLET 120 usage_00035.pdb 60 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFAG-TMSMLVLLPDEVSGLEQLES 118 usage_00036.pdb 60 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFAG-TMSMLVLLPDEVSGL----- 113 usage_00037.pdb 58 FRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYVG-GISMLIVVPHKMSGMKTLEA 116 usage_00038.pdb 61 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLES 120 usage_00039.pdb 61 FRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLES 120 usage_00048.pdb 61 FWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEE 120 usage_00049.pdb 61 FWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEE 120 usage_00074.pdb 50 FMVTRSYTVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHVEPLERLEK 109 F MM f a le p Sm l P gl usage_00011.pdb 121 I- 121 usage_00012.pdb 121 I- 121 usage_00034.pdb 121 T- 121 usage_00035.pdb 119 I- 119 usage_00036.pdb -- usage_00037.pdb 117 Q- 117 usage_00038.pdb 121 I- 121 usage_00039.pdb 121 I- 121 usage_00048.pdb 121 K- 121 usage_00049.pdb 121 K- 121 usage_00074.pdb 110 LL 111 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################