################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:41 2021 # Report_file: c_1020_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00136.pdb # 2: usage_00247.pdb # 3: usage_00252.pdb # 4: usage_00253.pdb # 5: usage_00255.pdb # 6: usage_00256.pdb # 7: usage_00258.pdb # 8: usage_00365.pdb # 9: usage_00416.pdb # 10: usage_00487.pdb # 11: usage_00505.pdb # # Length: 53 # Identity: 14/ 53 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 53 ( 39.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 53 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 KTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYG 53 usage_00247.pdb 1 RTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLG 51 usage_00252.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00253.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00255.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00256.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00258.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00365.pdb 1 KQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWN 53 usage_00416.pdb 1 KTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQN 53 usage_00487.pdb 1 -----NGPQGVFE-PNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQN 47 usage_00505.pdb 1 -----NGPQGVFE-PNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQN 47 NGP GVFE Fa G vv G ti GGGDta #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################