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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:50:13 2021
# Report_file: c_1281_8.html
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#====================================
# Aligned_structures: 8
#   1: usage_00061.pdb
#   2: usage_00138.pdb
#   3: usage_00139.pdb
#   4: usage_00166.pdb
#   5: usage_00269.pdb
#   6: usage_00319.pdb
#   7: usage_00673.pdb
#   8: usage_00877.pdb
#
# Length:         77
# Identity:        7/ 77 (  9.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     13/ 77 ( 16.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           34/ 77 ( 44.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00061.pdb         1  ----VISVKITN--PQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENI   54
usage_00138.pdb         1  GLIAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI   58
usage_00139.pdb         1  --IAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI   56
usage_00166.pdb         1  GLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKA   60
usage_00269.pdb         1  ---YVISVKITN--PQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENI   55
usage_00319.pdb         1  ----------------------DKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI   38
usage_00673.pdb         1  ----------------------DKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI   38
usage_00877.pdb         1  GLIAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI   58
                                                  KL    v   V      lL   L  Np  A   v  i

usage_00061.pdb        55  SKVAQ------------   59
usage_00138.pdb        59  IDAARAREAARRAREMT   75
usage_00139.pdb        57  IDAARAREAARRAREMT   73
usage_00166.pdb        61  IKARDAREAARKA----   73
usage_00269.pdb        56  SKVAQKRIN--------   64
usage_00319.pdb        39  IDAARAREAARRAREMT   55
usage_00673.pdb        39  IDAARAREAAR------   49
usage_00877.pdb        59  IDAARAREAARRARE--   73
                              a             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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