################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:05 2021 # Report_file: c_0990_22.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00042.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00122.pdb # 6: usage_00189.pdb # 7: usage_00190.pdb # 8: usage_00309.pdb # 9: usage_00345.pdb # 10: usage_00346.pdb # 11: usage_00358.pdb # 12: usage_00364.pdb # 13: usage_00406.pdb # 14: usage_00419.pdb # 15: usage_00424.pdb # 16: usage_00427.pdb # # Length: 46 # Identity: 4/ 46 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 46 ( 52.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 46 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --VWIAKSS-------ILISSEASELLDFIDE--------VHVIQK 29 usage_00042.pdb 1 --VWIAKSS-------ILISSEASELLDFIDE--------VHVIQK 29 usage_00073.pdb 1 --VWIAKSSS-----GILISSDATELLDFIDNQG-----QVHVIQK 34 usage_00074.pdb 1 --VWIAKSSS----EGILISSDATELLDFIDNQG-----QVHVIQK 35 usage_00122.pdb 1 --KSVIIQ-------GIDVSIED-NIFELYDIFASIDGFLYLVTK- 35 usage_00189.pdb 1 --VWIAKSS-----EGILISSEASELLDFIDEQG-----QVHVIQK 34 usage_00190.pdb 1 --VWIAKSSAGAKGEGILISSEASELLDFIDEQG-----QVHVIQK 39 usage_00309.pdb 1 --VWIAKS-------GILISSEASELLDFID---------VHVIQK 28 usage_00345.pdb 1 --VWIAKS-------GILISSEASELLDFIDE--------VHVIQK 29 usage_00346.pdb 1 GNVWIAKSSAG----AILISSEASELLDFIDEQG-----QVHVIQK 37 usage_00358.pdb 1 --VWIAKSSAGAKGEGILISSEASELLDFIDEQG-----QVHVIQK 39 usage_00364.pdb 1 --VWIAKSS-------ILISSEASELLDFIDE--------VHVIQK 29 usage_00406.pdb 1 --VWIAKSSAGAKGEGILISSEASELLDFIDEQG-----QVHVIQK 39 usage_00419.pdb 1 --VWIAKSS-----EGILISSEASELLDFIDEQG-----QVHVIQK 34 usage_00424.pdb 1 --VWIAKSSA---GEGILISSEASELLDFIDEQG-----QVHVIQK 36 usage_00427.pdb 1 --VWIAKSSAGAKGEGILISSEASELLDFIDEQG-----QVHVIQK 39 vwiaks IliSs a elldfiD vhViq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################