################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:53 2021 # Report_file: c_0392_7.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00098.pdb # 7: usage_00099.pdb # 8: usage_00104.pdb # 9: usage_00105.pdb # 10: usage_00132.pdb # 11: usage_00133.pdb # 12: usage_00134.pdb # 13: usage_00135.pdb # 14: usage_00201.pdb # 15: usage_00202.pdb # 16: usage_00229.pdb # # Length: 79 # Identity: 10/ 79 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 79 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 79 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -TRVDQ-TPRTATRETGESLTINCVLTDTSYPLYSTYWYRKNPGSSNKEQISI-----SG 53 usage_00013.pdb 1 -TRVDQ-TPRTATRETGESLTINCVLTDTSYPLYSTYWYRKNPGSSNKEQISI-----SG 53 usage_00073.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASYGLESTGWYRTKLGSTNEQTISI-----GG 53 usage_00074.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00075.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00098.pdb 1 -AWVDQ-TPRSVTKETGESLTINCALKNAADDLERTDWYRTTLGSTNEQKISI-----GG 53 usage_00099.pdb 1 -QTRFSQEPADQTVVAGQRAVLPCVLL---NYSGIVQWTKD-----GLALGMGQGLKAWP 51 usage_00104.pdb 1 ---VDQ-TPRTATKETGESLTINCVLRDASLELKDTGWYRTKLGSTNEQSISI-----GG 51 usage_00105.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00132.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00133.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00134.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00135.pdb 1 -AWVDQ-TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-----GG 53 usage_00201.pdb 1 --RVDQ-TPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISI-----GG 52 usage_00202.pdb 1 MARVDQ-TPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISI-----GG 54 usage_00229.pdb 1 -AWVDQ-TPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISI-----GG 53 vdq tPr T etGeslti CvL l t Wyr isi g usage_00012.pdb 54 RYVESVNKGTKSFSLRIKD 72 usage_00013.pdb 54 RYVESVNKGTKSFSLRIKD 72 usage_00073.pdb 54 RYVETVNKGSKSFSLRIRD 72 usage_00074.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00075.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00098.pdb 54 RYVETVNKGSKSFSLRIRD 72 usage_00099.pdb 52 RYRVVGSADAGQYNLEITD 70 usage_00104.pdb 52 RYVETVNKGSKSFSLRISD 70 usage_00105.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00132.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00133.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00134.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00135.pdb 54 RYVETVNKGSKSFSLRISD 72 usage_00201.pdb 53 RYSETVDEGSNSASLTIRD 71 usage_00202.pdb 55 RYSETVDEGSNSASLTIRD 73 usage_00229.pdb 54 RYDETVDKGSKSFSLRIS- 71 RY e v g s sL I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################