################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:02 2021 # Report_file: c_0055_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00062.pdb # 2: usage_00064.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00261.pdb # 8: usage_00262.pdb # 9: usage_00263.pdb # 10: usage_00264.pdb # 11: usage_00342.pdb # 12: usage_00343.pdb # # Length: 220 # Identity: 198/220 ( 90.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 198/220 ( 90.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/220 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 --IVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 58 usage_00064.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00065.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00066.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00067.pdb 1 EEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 60 usage_00068.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00261.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00262.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00263.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00264.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00342.pdb 1 -EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 59 usage_00343.pdb 1 EEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE 60 IVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTE usage_00062.pdb 59 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 116 usage_00064.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00065.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLL-------MGSFEERKEYFEK 112 usage_00066.pdb 60 RALRAYPGRSLFNSAKVDEEELE-KINLLKKYGGTLIVLL-GKDVPK--SFEERKEYFEK 115 usage_00067.pdb 61 RALRAYPGRSLFNSAKVDEEELE-KINLLKKYGGTLIVLL-GKDVPK--SFEERKEYFEK 116 usage_00068.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00261.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00262.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00263.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00264.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00342.pdb 60 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPK--SFEERKEYFEK 117 usage_00343.pdb 61 RALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLL-------MGSFEERKEYFEK 113 RALRAYPGRSLFNSAKVDEEELE KINLLKKYGGTLIVLL SFEERKEYFEK usage_00062.pdb 117 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNL------R 170 usage_00064.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 177 usage_00065.pdb 113 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLS---PDR 169 usage_00066.pdb 116 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 175 usage_00067.pdb 117 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 176 usage_00068.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 177 usage_00261.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 177 usage_00262.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 177 usage_00263.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFLPD-R 176 usage_00264.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFLPD-R 176 usage_00342.pdb 118 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDR 177 usage_00343.pdb 114 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLS---PDR 170 ALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSKGFNTTVGLSNL R usage_00062.pdb 171 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 210 usage_00064.pdb 178 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 217 usage_00065.pdb 170 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 209 usage_00066.pdb 176 SYYNTAFLVLGISKGLSSAIN-PLDET-LKTLNATLVILE 213 usage_00067.pdb 177 SYYNTAFLVLGISKGLSSAIN-PLDET-LKTLNATLVILE 214 usage_00068.pdb 178 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 217 usage_00261.pdb 178 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 217 usage_00262.pdb 178 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 217 usage_00263.pdb 177 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 216 usage_00264.pdb 177 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 216 usage_00342.pdb 178 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 217 usage_00343.pdb 171 SYYNTAFLVLGISKGLSSAIMNPLDETLMKTLNATLVILE 210 SYYNTAFLVLGISKGLSSAI PLDET KTLNATLVILE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################