################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:12 2021 # Report_file: c_0458_15.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00005.pdb # 2: usage_00045.pdb # 3: usage_00099.pdb # 4: usage_00118.pdb # 5: usage_00122.pdb # 6: usage_00123.pdb # 7: usage_00135.pdb # 8: usage_00158.pdb # 9: usage_00159.pdb # 10: usage_00199.pdb # 11: usage_00202.pdb # # Length: 86 # Identity: 9/ 86 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 86 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 86 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ----SISIFTKPG-----CPFCAKAKQLLHDKGLSFEEIILGHD---ATIVSVRAVSG-R 47 usage_00045.pdb 1 ----NVEIYTKET-----CPYCHRAKALLSSKGVSFQELPIDG--NAAKREEMIKRSG-R 48 usage_00099.pdb 1 ---AKIEIYTWST-----CPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARANGK 50 usage_00118.pdb 1 -SMVDVIIYTRPG-----CPYCARAKALLARKGAEFNEIDASA--TPELRAEMQERSG-R 51 usage_00122.pdb 1 ----DVIIYTRPG-----CPYCARAKALLARKGAEFNEIDASA--TPELRAEMQERSG-R 48 usage_00123.pdb 1 ----DVIIYTRPG-----CPYCARAKALLARKGAEFNEIDASA--TPELRAEMQERSG-R 48 usage_00135.pdb 1 ----PILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ-NPDIRAELPK-YAN-W 53 usage_00158.pdb 1 ----NITIYTKNY-----CPYCKKAVSLLSSKGVDFKEVDVTH--DSKAFEDVMAKTG-W 48 usage_00159.pdb 1 ---KNITIYTKNY-----CPYSKKAVSLLSSKGVDFKEVDVTH--DSKAFEDVMAKTG-W 49 usage_00199.pdb 1 ---AKIEIYTWST-----CPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARANGK 50 usage_00202.pdb 1 GSMKEIILYTRPN-----CPYCKRARDLLDKKGVKYTDIDAS---TSLRQEMVQRANG-R 51 yt Cp A lL kG f usage_00005.pdb 48 TTVPQVFIGGKHIGGSDDLEKYFA-- 71 usage_00045.pdb 49 TTVPQIFIDAQHIGGYDDLYALDARG 74 usage_00099.pdb 51 RSLPQIFIDDQHIGGCDDIYILDGAG 76 usage_00118.pdb 52 NTFPQIFIGSVHVGGCDDLYALEDEG 77 usage_00122.pdb 49 NTFPQIFIGSVHVGGSDDLYALEDEG 74 usage_00123.pdb 49 NTFPQIFIGSVHVGGSDDLYALEDEG 74 usage_00135.pdb 54 PTFPQLWVDGELVGGCDIVIEMYQRG 79 usage_00158.pdb 49 DTVPQVFVDEEFLGG-DDIHALDRQG 73 usage_00159.pdb 50 DTVPQVFVDEEFLGG-DDIHALDRQG 74 usage_00199.pdb 51 RSLPQIFIDDQHIGGCDDIYALDGSG 76 usage_00202.pdb 52 NTFPQIFIGDYHVGGCDDLYALENKG 77 PQ f GG Dd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################