################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:58 2021 # Report_file: c_1104_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00112.pdb # 2: usage_00376.pdb # 3: usage_00388.pdb # 4: usage_00435.pdb # 5: usage_00727.pdb # 6: usage_00728.pdb # 7: usage_00855.pdb # 8: usage_00866.pdb # # Length: 114 # Identity: 35/114 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/114 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/114 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 ----QLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKME 56 usage_00376.pdb 1 --------LMPTLEALYR--QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD 50 usage_00388.pdb 1 KVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 60 usage_00435.pdb 1 ---EQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 57 usage_00727.pdb 1 --SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 58 usage_00728.pdb 1 --SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 58 usage_00855.pdb 1 ---EQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 57 usage_00866.pdb 1 --EELRQALMPTLEALYR--QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD 56 L PF PVD LG DY DI K PMD STiK Kl usage_00112.pdb 57 NRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM----- 105 usage_00376.pdb 51 TGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSLG 104 usage_00388.pdb 61 AREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM----- 109 usage_00435.pdb 58 SREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM----- 106 usage_00727.pdb 59 AREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM----- 107 usage_00728.pdb 59 AREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM----- 107 usage_00855.pdb 58 SREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM----- 106 usage_00866.pdb 57 TGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQ--- 107 Y DV LMF N YN V KL VFE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################