################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:18 2021 # Report_file: c_0004_17.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00198.pdb # 4: usage_00262.pdb # 5: usage_00263.pdb # 6: usage_00264.pdb # 7: usage_00265.pdb # 8: usage_00283.pdb # 9: usage_00380.pdb # 10: usage_00381.pdb # 11: usage_00394.pdb # # Length: 255 # Identity: 150/255 ( 58.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 150/255 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/255 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -AGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 59 usage_00027.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 usage_00198.pdb 1 -AGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 59 usage_00262.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 usage_00263.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 usage_00264.pdb 1 -AGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 59 usage_00265.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 usage_00283.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 usage_00380.pdb 1 -------AGVTDVAWVSEKGILVASDSGAVELW--------LVNKFAKYEHDDIVKTLSV 45 usage_00381.pdb 1 -------AGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV 53 usage_00394.pdb 1 SAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV 60 AGV D WV E GILVASDSGAVELW V KF KYEHDDIV T SV usage_00026.pdb 60 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 119 usage_00027.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 usage_00198.pdb 60 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 119 usage_00262.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 usage_00263.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 usage_00264.pdb 60 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 119 usage_00265.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 usage_00283.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 usage_00380.pdb 46 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 105 usage_00381.pdb 54 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 113 usage_00394.pdb 61 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 120 S GTQAVSG KD KVWDL Q VL SY AH V CVAA P KD FLSC ED RIL usage_00026.pdb 120 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 179 usage_00027.pdb 121 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 180 usage_00198.pdb 120 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 179 usage_00262.pdb 121 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 180 usage_00263.pdb 121 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 180 usage_00264.pdb 120 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 179 usage_00265.pdb 121 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 180 usage_00283.pdb 121 LWDTRCPKPASQIG----GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS---VLSSAV 173 usage_00380.pdb 106 LWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV 165 usage_00381.pdb 114 LWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV 173 usage_00394.pdb 121 LWDTRCPKPASQIG----GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS--CVLSSAV 174 LWDTR PKPA I PTS WHP F GDE G VSLV K SAV usage_00026.pdb 180 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 239 usage_00027.pdb 181 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 240 usage_00198.pdb 180 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 239 usage_00262.pdb 181 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 240 usage_00263.pdb 181 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 240 usage_00264.pdb 180 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 239 usage_00265.pdb 181 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 240 usage_00283.pdb 174 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 233 usage_00380.pdb 166 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKF 225 usage_00381.pdb 174 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKF 233 usage_00394.pdb 175 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 234 HSQ TGL S HS PFLAS SEDC AVLD SE FR HRDFV WSPL HS usage_00026.pdb 240 TTVGWDHQVVHHVVP 254 usage_00027.pdb 241 TTVGWDHQVVHHVVP 255 usage_00198.pdb 240 TTVGWDHQVVHHVVP 254 usage_00262.pdb 241 TTVGWDHQVVHHVVP 255 usage_00263.pdb 241 TTVGWDHQVVHHVVP 255 usage_00264.pdb 240 TTVGWDHQVVHHVVP 254 usage_00265.pdb 241 TTVGWDHQVVHHVVP 255 usage_00283.pdb 234 TTVGWDHQVVHHVVP 248 usage_00380.pdb 226 TTVGWDHKVLHHHLP 240 usage_00381.pdb 234 TTVGWDHKVLHHHL- 247 usage_00394.pdb 235 TTVGWDHQVVHHV-- 247 TTVGWDH V HH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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