################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:25 2021 # Report_file: c_0940_94.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00294.pdb # 2: usage_00456.pdb # 3: usage_00637.pdb # 4: usage_00638.pdb # 5: usage_01135.pdb # 6: usage_01388.pdb # 7: usage_01389.pdb # 8: usage_01724.pdb # # Length: 94 # Identity: 0/ 94 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 94 ( 1.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 82/ 94 ( 87.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00294.pdb 1 ---S-ASLV----TT--------LK-------G-DKQVIAKVN--G-------------- 20 usage_00456.pdb 1 --------N----GQ--------LDIGGVDFGSSITYSC-NS---GYH-LIGE-SKSYCE 34 usage_00637.pdb 1 ---S-GSIL----TE--------VV-------N-GKQVIKKID--G-------------- 20 usage_00638.pdb 1 ---S-GSIL----TE--------VV-------N-GKQVIKKID--G-------------- 20 usage_01135.pdb 1 ----P-SFRGEVLKLSKISRNEM---------G-SYLCIASNGVPP--SVS---KRISLS 40 usage_01388.pdb 1 GCKS-GSIL----TE--------VV-------K-GKQVIKKVN--G-------------- 23 usage_01389.pdb 1 ---S-GSIL----TE--------VV-------K-GKQVIKKVN--G-------------- 20 usage_01724.pdb 1 ----DVDVF----TD--------P-V------S-GKSYLYWGN--G-------YAGAELN 27 g usage_00294.pdb 21 -----KYF-YWGEKNVYAATSDN-LIDWDP---- 43 usage_00456.pdb 35 LGS-TGS--------MVWNP-------------- 45 usage_00637.pdb 21 -----KYFMYWGEEHVFAATSED-LVNWTPYV-N 47 usage_00638.pdb 21 -----KYFMYWGEEHVFAATSED-LVNWTP---- 44 usage_01135.pdb 41 ----------------------IH---------- 42 usage_01388.pdb 24 -----KYF-YWGEEHVFAATSDD-LIHWTP---- 46 usage_01389.pdb 21 -----KYF-YWGEEHVFAATSDD-LIHWTP---- 43 usage_01724.pdb 28 ---DD------------LSIKEE-T-TVVL--TP 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################