################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:05 2021 # Report_file: c_1135_65.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00055.pdb # 2: usage_00061.pdb # 3: usage_00070.pdb # 4: usage_00075.pdb # 5: usage_00080.pdb # 6: usage_00233.pdb # 7: usage_00760.pdb # 8: usage_00806.pdb # 9: usage_01077.pdb # 10: usage_01102.pdb # 11: usage_01108.pdb # 12: usage_01138.pdb # 13: usage_01140.pdb # 14: usage_01143.pdb # 15: usage_01261.pdb # # Length: 85 # Identity: 55/ 85 ( 64.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 85 ( 89.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 85 ( 4.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_00061.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_00070.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_00075.pdb 1 NVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 60 usage_00080.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_00233.pdb 1 -YVDTERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGL 59 usage_00760.pdb 1 NVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLGL 60 usage_00806.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01077.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01102.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01108.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01138.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01140.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01143.pdb 1 -VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 59 usage_01261.pdb 1 ---DTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDL 57 DTEeIMisKLarQidGsEWSWhNiNTLsWAIGSISGtMsEdtEKRFvVTVIKDLL L usage_00055.pdb 60 CVKKRGKDNKAVVASDIMYVVGQYP 84 usage_00061.pdb 60 CVKKRGKDNAAVVASDIMYVVGQY- 83 usage_00070.pdb 60 CVKKSGKDNEAVVASDIMYVVGQYP 84 usage_00075.pdb 61 CVKKRGKDNKAVVASDIMYVVGQYP 85 usage_00080.pdb 60 CVKKRGKDNKAVVASDIMYVVGQYP 84 usage_00233.pdb 60 CEQKRGKDNKAIIASNIMYIVGQYP 84 usage_00760.pdb 61 CEQKRGKDNKAVVASDIMYVVGQYP 85 usage_00806.pdb 60 TVKKRGKDNKAVVASDIMYVVGQYP 84 usage_01077.pdb 60 CVKKRGKDNKAVVASDIMYVVGQYP 84 usage_01102.pdb 60 CVKKRGKDNKAVVASDIMYVVGQYP 84 usage_01108.pdb 60 CVKKRGKDNKAVVASDIMYVVGQYP 84 usage_01138.pdb 60 CVKKRGKDNKAVVASDIMYVVGQY- 83 usage_01140.pdb 60 CVKKRGKDNKAVVASDIMYVVGQY- 83 usage_01143.pdb 60 CVKKRGKDNEAVVASDIMYVVGQY- 83 usage_01261.pdb 58 TVKKRGKDNKAVVASDIMYVVGQYP 82 KrGKDN AvvASdIMYvVGQY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################