################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:37 2021 # Report_file: c_1445_1395.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_03704.pdb # 2: usage_03705.pdb # 3: usage_04094.pdb # 4: usage_04591.pdb # 5: usage_09651.pdb # 6: usage_09652.pdb # 7: usage_10267.pdb # 8: usage_10553.pdb # 9: usage_11993.pdb # 10: usage_13685.pdb # 11: usage_15422.pdb # 12: usage_15423.pdb # 13: usage_15762.pdb # 14: usage_16685.pdb # 15: usage_16686.pdb # # Length: 31 # Identity: 6/ 31 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 31 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 31 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03704.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWA----- 25 usage_03705.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWA----- 25 usage_04094.pdb 1 -RTDSPKAHVTHHSRPEDKVTLRCWALGFYP 30 usage_04591.pdb 1 LRTDSPKAHVTHHSRPEDKVTLRCWALGFYP 31 usage_09651.pdb 1 -RTDSPKAHVTHH-------TLRCWALGFYP 23 usage_09652.pdb 1 LRTDSPKAHVTHHPR-----TLRCWALGFYP 26 usage_10267.pdb 1 ----SPKAHVTHHSRPEDKVTLRCWAL---- 23 usage_10553.pdb 1 DRQDPPSVVVTSHQAPGEKKKLKCL------ 25 usage_11993.pdb 1 -RTDSPKAHVTHHSRPEDKVTLRCWALG--- 27 usage_13685.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWALG--- 27 usage_15422.pdb 1 -RTDSPKAHVTHHSRPEDKVTLRCWALG--- 27 usage_15423.pdb 1 -RTDSPKAHVTHHSRPEDKVTLRCWALG--- 27 usage_15762.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWA----- 25 usage_16685.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWALG--- 27 usage_16686.pdb 1 -RTDSPKAHVTHHPRSKGEVTLRCWALG--- 27 sPkahVThH tLrCw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################