################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:47 2021 # Report_file: c_0039_32.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00072.pdb # # Length: 235 # Identity: 44/235 ( 18.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 205/235 ( 87.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/235 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 ASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL-----DTTTNTVATPTFVQYRQN 55 usage_00022.pdb 1 ASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL-----DTTTNTVATPTFVQYRQN 55 usage_00072.pdb 1 YFHLHQALARHHQVPASWILAGNGETESIFTVASGLKPRRAM------IVTPGFAEYGRA 54 assLrkevAdfyQleeeeliftaGvdElIelltrvLl vaTPtFvqYrqn usage_00021.pdb 56 ALIEGAEVREIPLLQ--DGEHDLEGLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR 113 usage_00022.pdb 56 ALIEGAEVREIPLLQ--DGEHDLEGLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR 113 usage_00072.pdb 55 LAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADR 114 alieGaEvReipLlq dgehdlegLnAidekttivwiCnPNNPTGnyiEladiQAflDR usage_00021.pdb 114 V--PSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD- 170 usage_00022.pdb 114 V--PSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD- 170 usage_00072.pdb 115 CKSL-NINLILDEAFIDFIPHETG-FIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD 172 v p dvlvvLDEAyIeyvtpqpe heklvrtyknliitRtfsKiYglasaRvGYgiad usage_00021.pdb 171 KEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRF 225 usage_00022.pdb 171 KEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRF 225 usage_00072.pdb 173 DAAMARMRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLRE------------ 215 keiirqlnivrpPfnttsigqklaieAikDqAfigecrtsnan #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################