################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:38 2021 # Report_file: c_0872_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00082.pdb # # Length: 169 # Identity: 40/169 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/169 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/169 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 AAIAATAMASLL--LLIKIFAWWYTGSVSIL---AALVDSLVDIGASLTNLLVVRYSLQ- 54 usage_00009.pdb 1 AAIAATAMASLL--LLIKIFAWWYTGSVSIL---AALVDSLVDIGASLTNLLVVRYSLQ- 54 usage_00018.pdb 1 -AAIAATAMASLLLLIKIFAWWY--TGSVSILAA--LVDSLVDIGASLTNLLVVRYSLQ- 54 usage_00019.pdb 1 -AAIAATAMASLLLLIKIFAWWY--TGSVSILAA--LVDSLVDIGASLTNLLVVRYSLQ- 54 usage_00082.pdb 1 RASVATALTL-I--TIKLLAWLY--SGSASMLAS--LTDSFADTLASIINFIAIRYAIVP 53 A A l l w LvDSlvDigASltNllvvRYslq usage_00008.pdb 55 -----PADDNHS-FGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVG-- 106 usage_00009.pdb 55 -----PADDNHS-FGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVG-- 106 usage_00018.pdb 55 -----PAD-DNHSFGHGKAESLAALAQS-MFISGSALFLF-LTGIQHLISPT---PMT-- 101 usage_00019.pdb 55 -----PAD-DNHSFGHGKAESLAALAQS-MFISGSALFLF-LTGIQHLISPT---PMT-- 101 usage_00082.pdb 54 ADHDH------R-YGHGKAEPLAALAQSA-FIMGSAFLLL-FYGGERLLNPS---PVENA 101 fGHGKAEsLAALAQS P usage_00008.pdb 107 V-IV-TIV----ALICTIILVSFQRWVVRRTQSQ-AVRADMLHYQSDVM 148 usage_00009.pdb 107 V-IV-TIV----ALICTIILVSFQRWVVRRTQSQ-AVRADMLHYQSDVM 148 usage_00018.pdb 102 DPGV-GVIVTIVALICTIILVSFQRWVVRRTQSQA-VRADMLHYQSDV- 147 usage_00019.pdb 102 DPGV-GVIVTIVALICTIILVSFQRWVVRRTQSQA-VRADMLHYQSDV- 147 usage_00082.pdb 102 ---TLGVVVSVVAIVLTLALVLLQKRALAATNSTV-VEADSLHYKSDLF 146 v AlicTiiLVsfQrwvvrrTqSq VrADmLHYqSDv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################