################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:47 2021 # Report_file: c_1089_60.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00134.pdb # 2: usage_00198.pdb # 3: usage_00765.pdb # 4: usage_00880.pdb # 5: usage_00882.pdb # 6: usage_01003.pdb # 7: usage_01315.pdb # 8: usage_01525.pdb # # Length: 85 # Identity: 0/ 85 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 85 ( 3.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 85 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 YSGFYTFSL-LDHHYRPDM-----TTEEGLDLLKLCVQELEK-----RMPM--DF-KGVI 46 usage_00198.pdb 1 --GFYTFSL-LDHHYRPDM-----TTEEGLDLLKLCVQELEK-----RMPM--DF-KGVI 44 usage_00765.pdb 1 ---EGAQAE-LLNEWHSSL-----TLKEAELLVLKILKQVMEEKLDE-------N--NAQ 42 usage_00880.pdb 1 --GFYTFSL-LDHHYRPDM-----TTEEGLDLLKLCVQELEK-----RMPM--DF-KGVI 44 usage_00882.pdb 1 --GFYTFSL-LDHHYRPDM-----TTEEGLDLLKLCVQELEK-----RMPM--DF-KGVI 44 usage_01003.pdb 1 ---Q-LSHV-QEKLHLPYI-----TTNGIVDVFKECLKRTKK-----QYPE--VL-KNWW 42 usage_01315.pdb 1 -------MELE-E------THWDWTMNINAKALLFCAQEAAK-----LME-KNGGGHIVS 40 usage_01525.pdb 1 -GAFLTLSI-LDRYYTPTI-----SRERAVELLRKCLEELQK-----RFIL--NL-PTFS 45 t c k usage_00134.pdb 47 VKIVDK-DGI-RQ-V---------- 58 usage_00198.pdb 45 VKIVDK-DGI-RQ-V---------- 56 usage_00765.pdb 43 LSCITK-QDGFKIYD---------- 56 usage_00880.pdb 45 VKIVDK-DGI-RQ-VD--------- 57 usage_00882.pdb 45 VKIVDK-DGI-RQ-VD--------- 57 usage_01003.pdb 43 IDLDNSG----IL-LH------LE- 55 usage_01315.pdb 41 ISSLGS-I---RY--LENYTT-VG- 57 usage_01525.pdb 46 VRIIDK-NGI-HD-LD----NI-SF 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################