################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:23 2021 # Report_file: c_0470_21.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00123.pdb # 2: usage_00274.pdb # 3: usage_00405.pdb # 4: usage_00406.pdb # 5: usage_00407.pdb # 6: usage_00408.pdb # 7: usage_00443.pdb # 8: usage_00444.pdb # 9: usage_00445.pdb # 10: usage_00482.pdb # 11: usage_00585.pdb # # Length: 90 # Identity: 6/ 90 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 90 ( 28.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 90 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 -WLSVNRIYP---EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIK------IA 50 usage_00274.pdb 1 -LCCFNNSYKLNPQ-SMARMLAVLREVPDSVLWLLSG------PGEADARLRAFAHAQGV 52 usage_00405.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00406.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00407.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00408.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00443.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00444.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00445.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00482.pdb 1 -YCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRF------PAVGEPNIQQYAQNMGL 52 usage_00585.pdb 1 VLCCFNNSYKLNPQ-SMARMLAVLREVPDSVLWLLSG------PGEADARLRAFAHAQGV 53 c fN Yk l vp svLwll p g usage_00123.pdb 51 -PDNVKFLGSVSEEELIDLYSRCKGLLCT- 78 usage_00274.pdb 53 DAQRLVFMPKLPHPQYLARYRHADLFLDTH 82 usage_00405.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00406.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00407.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00408.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00443.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00444.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00445.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00482.pdb 53 PQNRIIFSPVAPKEEHVRRGQLADVCLDT- 81 usage_00585.pdb 54 DAQRLVFMPKLPHPQYLARYRHADLFLDT- 82 r F p p r ad LdT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################