################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:35 2021 # Report_file: c_0194_37.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00308.pdb # 2: usage_00309.pdb # 3: usage_00514.pdb # 4: usage_00515.pdb # 5: usage_00535.pdb # 6: usage_00536.pdb # 7: usage_00651.pdb # # Length: 161 # Identity: 59/161 ( 36.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/161 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/161 ( 19.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00308.pdb 1 -PEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIKAGLAIKPATKFEDLGE 59 usage_00309.pdb 1 -PEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIKAGLAIKPATKFEDLGE 59 usage_00514.pdb 1 KPEQWVKPMAVAGANQYTFHLEATE----NPGALIKDIRENGMKVGLAIKPGTSVEYLAP 56 usage_00515.pdb 1 KPEQWVKPMAVAGANQYTFHLEATE----NPGALIKDIRENGMKVGLAIKPGTSVEYLAP 56 usage_00535.pdb 1 KPEQWVK-PAVAGANQYTFHLEATE----NPGALIKDIRENG-KVGLAIKPGTSVEYLAP 54 usage_00536.pdb 1 -----VK-PAVAGANQYTFHLEATE----NPGALIKDIRENG-KVGLAIKPGTSVEYLAP 49 usage_00651.pdb 1 -PEQWVKPMAVAGANQYTFHLEATE----NPGALIKDIRENGMKVGLAIKPGTSVEYLAP 55 A AGAN TFH E L K I G K GLAIKP T E L usage_00308.pdb 60 ALAGDNFDM--LLVMTVEPGFGGQKF--MADMLQKVRTARSLFPKLNIQVDGGLDGETVK 115 usage_00309.pdb 60 ALAGDNFDM--LLVMTVEPGFGGQKF--MADMLQKVRTARSLFPKLNIQVDGGLDGETVK 115 usage_00514.pdb 57 WANQ--IDM--ALVMTVEPGFGGQKF--MEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVH 110 usage_00515.pdb 57 WANQ--IDM--ALVMTVEPGFGGQKF--MEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVH 110 usage_00535.pdb 55 WANQ--IDALV----TVEPGFGGQKFED-----PKVHWLRTQFPSLDIEVDGGVGPDTVH 103 usage_00536.pdb 50 WANQ--IDALV----TVEPGFGGQKFED-----PKVHWLRTQFPSLDIEVDGGVGPDTVH 98 usage_00651.pdb 56 WANQ--IDM--ALVMTVEPGFGGQKF--MEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVH 109 D TVEPGFGGQKF KV R FP L I VDGG TV usage_00308.pdb 116 PAASAGANVIVAGTSMFKAENPAALMTFMRDVIAASD---- 152 usage_00309.pdb 116 PAASAGANVIVAGTSMFKAENPAALMTFMRDVIAASD---- 152 usage_00514.pdb 111 KCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQK-- 149 usage_00515.pdb 111 KCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQK-- 149 usage_00535.pdb 104 KCAEAGANI-VSGSA-IRSEDPRSVINLLRNVCSEAAQKR- 141 usage_00536.pdb 99 KCAEAGANI-VSGSA-IRSEDPRSVINLLRNVCSEAAQKR- 136 usage_00651.pdb 110 KCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRS 150 A AGAN V G E P R V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################