################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:45 2021 # Report_file: c_1368_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00170.pdb # 2: usage_00171.pdb # 3: usage_00198.pdb # 4: usage_00670.pdb # 5: usage_00893.pdb # 6: usage_00894.pdb # 7: usage_01324.pdb # 8: usage_01508.pdb # 9: usage_01554.pdb # 10: usage_01555.pdb # # Length: 61 # Identity: 5/ 61 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 61 ( 67.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 61 ( 32.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00170.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_00171.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_00198.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_00670.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_00893.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_00894.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_01324.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_01508.pdb 1 VQYLRW----GDPAPIAAVVFACLGLLATLFVTVVFIIYRDTPVVK----------SS-- 44 usage_01554.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 usage_01555.pdb 1 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYG---SATTPIELFGPTRYQWDSS 57 pQrLyk GnietvlsssiAavffaAfvvagtmwyg sattp wd usage_00170.pdb - usage_00171.pdb - usage_00198.pdb - usage_00670.pdb - usage_00893.pdb - usage_00894.pdb - usage_01324.pdb - usage_01508.pdb 45 S 45 usage_01554.pdb - usage_01555.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################