################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:15 2021 # Report_file: c_1479_114.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00915.pdb # 2: usage_00917.pdb # 3: usage_01116.pdb # 4: usage_01220.pdb # 5: usage_01734.pdb # # Length: 39 # Identity: 1/ 39 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 39 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 39 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00915.pdb 1 ----FEPIRLQMANVLSGETSPDEAAANTGDAYRKL--- 32 usage_00917.pdb 1 ----FEPIRLQMANVLSGETSPDEAAANTGDAYRKL--- 32 usage_01116.pdb 1 -------YTSLEQAFHDGIINQKQLEFAWSIVNDSYASS 32 usage_01220.pdb 1 WNKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMG- 38 usage_01734.pdb 1 -----EPIRLQMANVLSGETSPDEAAANTGDAYRKL--- 31 vl G p a n d k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################