################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:22 2021 # Report_file: c_1371_164.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00384.pdb # 2: usage_00386.pdb # 3: usage_00388.pdb # 4: usage_00391.pdb # 5: usage_00394.pdb # 6: usage_00404.pdb # 7: usage_00975.pdb # 8: usage_00977.pdb # 9: usage_00995.pdb # 10: usage_01001.pdb # 11: usage_01004.pdb # 12: usage_01009.pdb # 13: usage_01733.pdb # 14: usage_01734.pdb # # Length: 80 # Identity: 60/ 80 ( 75.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 80 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 80 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00384.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_00386.pdb 1 ----------------EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 44 usage_00388.pdb 1 SDYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 60 usage_00391.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_00394.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_00404.pdb 1 ---------------LEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 45 usage_00975.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_00977.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_00995.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_01001.pdb 1 ---------------LEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 45 usage_01004.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 usage_01009.pdb 1 ---------------LEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 45 usage_01733.pdb 1 ----------------EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 44 usage_01734.pdb 1 -DYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS 59 EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYAS usage_00384.pdb 60 RIDFKADRDQIVKAVL---- 75 usage_00386.pdb 45 RIDFKADRDQIVKAVLAGL- 63 usage_00388.pdb 61 RIDFKADRDQIVKAVLA--- 77 usage_00391.pdb 60 RIDFKADRDQIVKAVLAGL- 78 usage_00394.pdb 60 RIDFKADRDQIVKAVLAGLK 79 usage_00404.pdb 46 RIDFKADRDQIVKAVLAGL- 64 usage_00975.pdb 60 RIDFKADRDQIVKAVLA--- 76 usage_00977.pdb 60 RIDFKADRDQIVKAVLA--- 76 usage_00995.pdb 60 RIDFKADRDQIVKAVLA--- 76 usage_01001.pdb 46 RIDFKADRDQIVKAVLAGL- 64 usage_01004.pdb 60 RIDFKADRDQIVKAVLAGL- 78 usage_01009.pdb 46 RIDFKADRDQIVKAVLAGL- 64 usage_01733.pdb 45 RIDFKADRDQIVKAVLAGL- 63 usage_01734.pdb 60 RIDFKADRDQIVKAVLA--- 76 RIDFKADRDQIVKAVL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################