################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:38 2021 # Report_file: c_1172_204.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_03420.pdb # 2: usage_03883.pdb # 3: usage_03985.pdb # 4: usage_03986.pdb # 5: usage_03987.pdb # 6: usage_03988.pdb # 7: usage_05059.pdb # 8: usage_05060.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 67 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 67 ( 79.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03420.pdb 1 -GYAVSTS-E---------------------IDPGVSG--ISAPVKGSKL------IGAI 29 usage_03883.pdb 1 AQTVNSGIALAPGESWH--VPEQHLAN-----------------------ISPATLQGQL 35 usage_03985.pdb 1 -GVIVSTP-T-------GST-AYAAAAGAS-IHPNVPAI-ITPIC-----PHS--LSFRP 41 usage_03986.pdb 1 -GVIVSTP-T-------GST-AYAAAAGAS-IHPNVPAI-ITPIC-----PHS--LSFRP 41 usage_03987.pdb 1 -GVIVSTP-T-------GST-AYAAAAGAS-IHPNVPAI-ITPIC-----PHS--LSFRP 41 usage_03988.pdb 1 -GVIVSTP-T-------GST-AYAAAAGAS-IHPNVPAI-ITPIC-----PHS--LSFRP 41 usage_05059.pdb 1 -GVALATP-T-------GST-AYSLSAGGSIVSPLVPAILMTPIC-----PRS--LSFRP 43 usage_05060.pdb 1 -GVALATP-T-------GST-AYSLSAGGSIVSPLVPAILMTPIC-----PRS--LSFRP 43 g t usage_03420.pdb 30 SVAP--- 33 usage_03883.pdb 36 LL--SG- 39 usage_03985.pdb 42 IV--V-P 45 usage_03986.pdb 42 IV--V-P 45 usage_03987.pdb 42 IV--V-P 45 usage_03988.pdb 42 IV--V-P 45 usage_05059.pdb 44 LI--L-P 47 usage_05060.pdb 44 LI--L-P 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################