################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:27 2021 # Report_file: c_1481_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00860.pdb # 2: usage_03086.pdb # 3: usage_03087.pdb # 4: usage_03088.pdb # 5: usage_03089.pdb # 6: usage_03090.pdb # 7: usage_03091.pdb # # Length: 63 # Identity: 3/ 63 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 63 ( 60.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 63 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00860.pdb 1 ------YHVKTAFFHVCTQDP----HDNQWHLKNLECCFDNCVAYFLQCLKTE------- 43 usage_03086.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 usage_03087.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 usage_03088.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 usage_03089.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 usage_03090.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 usage_03091.pdb 1 SKQKVQMSIHQFTNICFKKCVESVNDSNL-----SSQEEQCLSNCVNRFLDTNIRIVNGL 55 msihqftnicfkkcv dsNl ssqeeqclsncvnrfLdTn usage_00860.pdb --- usage_03086.pdb 56 Q-- 56 usage_03087.pdb --- usage_03088.pdb 56 Q-- 56 usage_03089.pdb 56 QNT 58 usage_03090.pdb 56 QN- 57 usage_03091.pdb 56 QNT 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################