################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:19 2021 # Report_file: c_0020_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00033.pdb # 5: usage_00087.pdb # # Length: 224 # Identity: 44/224 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/224 ( 52.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/224 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -LILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA 56 usage_00013.pdb 1 TLILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA 57 usage_00014.pdb 1 --ILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA 55 usage_00033.pdb 1 --LLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGADG-HFCA 57 usage_00087.pdb 1 EVLLGKKGCTGVITLNRPKFLNALTL-NIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCA 59 Lek g tlvIT NRP rNA sL v el e D s ra vlrGAgG hFCA usage_00012.pdb 57 GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG 111 usage_00013.pdb 58 GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG 112 usage_00014.pdb 56 GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG 110 usage_00033.pdb 58 GGDIKDMAGARAAGA-------EAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFG 110 usage_00087.pdb 60 GGDIRVISEAEKAK------QKI-APVFFREEYL-NNAVGSCQKPYVALIHGIT-GGGVG 110 GGDIkd agAr k lnRafg v k A eGav GGGfG usage_00012.pdb 112 LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC 169 usage_00013.pdb 113 LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC 170 usage_00014.pdb 111 LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC 168 usage_00033.pdb 111 LACVSDVAIAAADAQFGLPETSLGILPAQIAPFVVRRIGL-TQARRLALTAARFDGREAL 169 usage_00087.pdb 111 LSVHGQFRVATEKCLFA-PETAIGLFPDVGGGYFLPRL-QGKLGYFLALTGFRLKGRDVY 168 Lacvsd aiA a Fg PET lG Paqiapfvv Ri l tqarrLAL g R d ea usage_00012.pdb 170 KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV 212 usage_00013.pdb 171 KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV 213 usage_00014.pdb 169 KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV 211 usage_00033.pdb 170 RLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLAS 213 usage_00087.pdb 169 RAGIATHFVD-SEKLAL-EEDLLAL------------------- 191 lGivh e L l Le #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################