################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:02 2021 # Report_file: c_1309_78.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00051.pdb # 2: usage_00056.pdb # 3: usage_00111.pdb # 4: usage_00691.pdb # 5: usage_00725.pdb # 6: usage_00728.pdb # 7: usage_00729.pdb # 8: usage_00995.pdb # 9: usage_01032.pdb # 10: usage_01156.pdb # 11: usage_01255.pdb # 12: usage_01280.pdb # 13: usage_01396.pdb # # Length: 30 # Identity: 2/ 30 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 30 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 30 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 ---TLQDIICEDSTL--I-EISFGKIYVT- 23 usage_00056.pdb 1 ---TLQDIICEDSTL--I-EISFGKIYVTK 24 usage_00111.pdb 1 ---TLQDIICEDSTL--I-LISFGKIYVTK 24 usage_00691.pdb 1 -PNIADYITAKNNVVINFKDMSHV------ 23 usage_00725.pdb 1 Y--TLQDIICEDSTL--I--ISFGKIYVT- 23 usage_00728.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 usage_00729.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 usage_00995.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 usage_01032.pdb 1 ---TLQDIICEDSTL--E--ISFGKIYVTK 23 usage_01156.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 usage_01255.pdb 1 ---TLQDIICEDSTL--I-EISFGKIYVTK 24 usage_01280.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 usage_01396.pdb 1 ---TLQDIICEDSTL--I--ISFGKIYVT- 22 tlqdIicedstl iSfg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################