################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:42 2021 # Report_file: c_0233_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00023.pdb # 2: usage_00070.pdb # 3: usage_00071.pdb # 4: usage_00091.pdb # 5: usage_00093.pdb # 6: usage_00130.pdb # 7: usage_00131.pdb # # Length: 176 # Identity: 51/176 ( 29.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/176 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/176 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -SINAKLVLLGDVGAGKSSLVLRFV------------A--AFFSQTLAVNDATVKFEIWD 45 usage_00070.pdb 1 -DFLFKFLVIGSAGTGKSCLLHQFIE-----------V--EFGSRVVNVGGKTVKLQIWD 46 usage_00071.pdb 1 --FLFKFLVIGSAGTGKSCLLHQFIE-----------V--EFGSRVVNVGGKTVKLQIWD 45 usage_00091.pdb 1 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQP------IGVEFGARMVNIDGKQIKLQIWD 54 usage_00093.pdb 1 -AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTI-GVEFGARMITIDGKQIKLQIWD 58 usage_00130.pdb 1 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQ---DLTI-GVEFGARMITIDGKQIKLQIWD 56 usage_00131.pdb 1 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTI-GVEFGARMITIDGKQIKLQIWD 59 lfK iG G GKScLl qF eFg r gk KlqIWD usage_00023.pdb 46 TAGQERYHSL---APMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 102 usage_00070.pdb 47 TAG---QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 103 usage_00071.pdb 46 TAG---QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 102 usage_00091.pdb 55 TAG---QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG 111 usage_00093.pdb 59 TAGLEAFRS---ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIG 115 usage_00130.pdb 57 TAG---QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIG 113 usage_00131.pdb 60 TAG---QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIG 116 TAG trsYYRGAAgAllVyDiT r t n l Wl dar N V L G usage_00023.pdb 103 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL------- 151 usage_00070.pdb 104 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSG 159 usage_00071.pdb 103 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI--- 155 usage_00091.pdb 112 NKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 167 usage_00093.pdb 116 NKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKI--- 168 usage_00130.pdb 114 NKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY------ 163 usage_00131.pdb 117 NKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY------ 166 NK DL R V e fA E L F ETSA T NVeEaF A i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################