################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:50 2021 # Report_file: c_0048_22.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00122.pdb # # Length: 243 # Identity: 46/243 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 209/243 ( 86.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/243 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 KYILITGASSGLGHHIAELFAKEGANIVICARRLERLKELESHIKNEYGVQVYTFALDVN 60 usage_00018.pdb 1 KYILITGASSGLGHHIAELFAKEGANIVICARRLERLKELESHIKNEYGVQVYTFALDVN 60 usage_00122.pdb 1 EWGLILGATEGVGKAFCEKIAAGGMNVVMVGRREEKLNVLAGEIRETYGVETKVVRADFS 60 kyiLItGAssGlGhhiaElfAkeGaNiVicaRRlErLkeLeshIkneYGVqvytfalDvn usage_00017.pdb 61 DRSAVKDLSSLEAEGVTIDVLINNAGVSDTKRFLDYNDEDWDKIVDTNLKAPWQCAQEVV 120 usage_00018.pdb 61 DRSAVKDLSSLEAEGVTIDVLINNAGVSDTKRFLDYNDEDWDKIVDTNLKAPWQCAQEVV 120 usage_00122.pdb 61 QPGAAETVFAATE-GLDMGFMSYVACLHSFGKIQDTPWEKHEAMINVNVVTFLKCFHHYM 119 drsAvkdlsslea GvtidvlinnAgvsdtkrflDyndEdwdkivdtNlkapwqCaqevv usage_00017.pdb 121 QHI-KAERKGSIINITSILSQSTNLGVSPYCASKAGLRHLTEV-AVELARFGINVNAIAP 178 usage_00018.pdb 121 QHI-KAERKGSIINITSILSQSTNLGVSPYCASKAGLRHLTEV-AVELARFGINVNAIAP 178 usage_00122.pdb 120 RIFAAQ-DRGAVINVSSMTGISSSPWNGQYGAGKAFILKMTEAVACECEGTGVDVEVITL 178 qhi ka rkGsiINitSilsqStnlgvspYcAsKAglrhlTEv AvElarfGinVnaIap usage_00017.pdb 179 GY-ITEINEEY-LTS----EVGQQLLKKIPTRKFVEFDDLNGPLLLLASQAGQGITGIEI 232 usage_00018.pdb 179 GY-ITEINEEY-LTS----EVGQQLLKKIPTRKFVEFDDLNGPLLLLASQAGQGITGIEI 232 usage_00122.pdb 179 GTTLTPSLLSNL--PGGPQ--------------ALTPEECVDEAFEKL----GKELSVI- 217 Gy iTeineey s fvefddlngplllla qgitgie usage_00017.pdb 233 KVD 235 usage_00018.pdb 233 KVD 235 usage_00122.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################