################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:10 2021 # Report_file: c_0173_6.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00114.pdb # 2: usage_00115.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00330.pdb # # Length: 200 # Identity: 73/200 ( 36.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 179/200 ( 89.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/200 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 PSPVALITGAGSGIGRATALALAADGVTVGALGRT-------------RTEVEEVADEIV 47 usage_00115.pdb 1 --PVALITGAGSGIGRATALALAADGVTVGALGRT-------------RTEVEEVADEIV 45 usage_00116.pdb 1 --PVALITGAGSGIGRATALALAADGVTVGALGRT-------------RTEVEEVADEIV 45 usage_00117.pdb 1 --PVALITGAGSGIGRATALALAADGVTVGALGRT-------------RTEVEEVADEIV 45 usage_00330.pdb 1 --RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE 58 pVAlITGAgsGiGRatAlaLAAdGvtvgAlgrt rteveEvAdeiv usage_00114.pdb 48 GAGGQAIALEADVSDELQ-RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 106 usage_00115.pdb 46 GAGGQAIALEADVSDELQ-RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 104 usage_00116.pdb 46 GAGGQAIALEADVSDELQ-RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 104 usage_00117.pdb 46 GAGGQAIALEADVSDELQ-RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 104 usage_00330.pdb 59 DQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWDTV 117 gaGgqAialeaDVsDelq RnaVrDlvlkFGhLDiVVANAGin vWapiddLkpfeWDet usage_00114.pdb 107 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVS-SINGTRTFTTPGATAYTATKAAQVAIVQ 165 usage_00115.pdb 105 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVS-SINGTRTFTTPGATAYTATKAAQVAIVQ 163 usage_00116.pdb 105 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVS-SINGTRTFTTPGATAYTATKAAQVAIVQ 163 usage_00117.pdb 105 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVS-SINGTRTFTTPGATAYTATKAAQVAIVQ 163 usage_00330.pdb 118 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL-K-ATPGNGHYSASKHGLTALTN 175 IaVNLrGTflTLhlTVPylkqrGgGaivVVs SinGt t tTPGataYtAtKaaqvAivq usage_00114.pdb 166 QLALELGKHHIRVNAVCPG- 184 usage_00115.pdb 164 QLALELGKHHIRVNAVCPG- 182 usage_00116.pdb 164 QLALELGKHHIRVNAVCPG- 182 usage_00117.pdb 164 QLALELGKHHIRVNAVCPG- 182 usage_00330.pdb 176 TLAIELGEYGIRVNSIHPYS 195 qLAlELGkhhIRVNavcPg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################