################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:31 2021 # Report_file: c_0766_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00049.pdb # 4: usage_00053.pdb # 5: usage_00060.pdb # 6: usage_00077.pdb # 7: usage_00086.pdb # 8: usage_00100.pdb # # Length: 86 # Identity: 28/ 86 ( 32.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 86 ( 39.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 86 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 NKLYTDFDEIRQEIENETERI-SGNNK-GVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPV 58 usage_00011.pdb 1 NKLYTDFDEIRQEIENETERI-SGNNK-GVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPV 58 usage_00049.pdb 1 GKKFTDFDEVRLEIEAETDRVT--GMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPV 58 usage_00053.pdb 1 GKKFTDFEEVRLEIEAETDRVT--GTNKGISPVPINLRVYSPHVLNLTLVDLPGT-KVPV 57 usage_00060.pdb 1 GKKFTDFEEVRLEIEAETDRVT--GTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPV 58 usage_00077.pdb 1 GKKFTDFDEVRLEIEAETD----------ISSIPINLRVYSPHVLNLTLIDLPGITKVPV 50 usage_00086.pdb 1 NKLYTDFDEIRQEIENETER---------VSPEPIHLKIFSPNVVNLTLVDLPGMTKV-- 49 usage_00100.pdb 1 RKKFTDFAAVRKEIQDETDRET--GRSKAISSVPIHLSIYSPNVVNLTLIDLPGLTKVAV 58 K TDF e R EIe ET S PI L SP V NLTL DLPG KV usage_00010.pdb 59 GDQP-KDIELQIRELI----LRFISN 79 usage_00011.pdb 59 GDQP-KDIELQIRELI----LRFI-- 77 usage_00049.pdb 59 G-DQPPDIEYQIREMI----MQ---- 75 usage_00053.pdb 58 G-DQPPDIEFQIRDLQFVTK------ 76 usage_00060.pdb 59 GDQP-PDIEFQIRDML----MQF--- 76 usage_00077.pdb 51 G-DQPPDIEYQIREMI----MQFITR 71 usage_00086.pdb 50 ----PKDIELQIRELI----LRFISN 67 usage_00100.pdb 59 D-GQSDSIVKDIENMV----RSYI-- 77 dIe qIr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################