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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Fri Jan 22 10:40:36 2021
# Report_file: c_1386_88.html
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#====================================
# Aligned_structures: 10
#   1: usage_00116.pdb
#   2: usage_00117.pdb
#   3: usage_00221.pdb
#   4: usage_00466.pdb
#   5: usage_00467.pdb
#   6: usage_00769.pdb
#   7: usage_00770.pdb
#   8: usage_01164.pdb
#   9: usage_01165.pdb
#  10: usage_01301.pdb
#
# Length:         66
# Identity:        2/ 66 (  3.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/ 66 ( 45.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/ 66 ( 53.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00116.pdb         1  ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_00117.pdb         1  ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_00221.pdb         1  ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_00466.pdb         1  WKACIAELIWFLSGSTNVNDLRLIQH---DSLIQGKTV-WDENY--ENQAKDL-------   47
usage_00467.pdb         1  ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_00769.pdb         1  ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_00770.pdb         1  ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_01164.pdb         1  ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
usage_01165.pdb         1  -------KK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   44
usage_01301.pdb         1  ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ   45
                                  kk       vll mRkfrm   qtadQl  r sylav  gakfimg       

usage_00116.pdb        46  WKELS-   50
usage_00117.pdb        46  WKELS-   50
usage_00221.pdb        46  WKELS-   50
usage_00466.pdb        48  ----G-   48
usage_00467.pdb        46  WKELSH   51
usage_00769.pdb        46  WKELSH   51
usage_00770.pdb        46  WKELS-   50
usage_01164.pdb        46  WKEL--   49
usage_01165.pdb        45  WKELS-   49
usage_01301.pdb        46  WKELSH   51
                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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