################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:44 2021 # Report_file: c_0763_39.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00014.pdb # 2: usage_00057.pdb # 3: usage_00144.pdb # 4: usage_00190.pdb # 5: usage_00191.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 79 ( 26.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 79 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 PQLLVLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVN-LINEPLVIFVCATTG 59 usage_00057.pdb 1 -PLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDSHAG--NLPREGAVLIVTASYN 57 usage_00144.pdb 1 --VTILFATETGKSEALAWDLGALFSC-AFNPKVVCMDKYRLSC-LEEERLLLVVTSTFG 56 usage_00190.pdb 1 VKATILYATETGKSQAYAKTLCEIFKH-AFDAKAMSMEEYDIVH-LEHEALVLVVTSTFG 58 usage_00191.pdb 1 VKATILYATETGKSQAYAKTLCEIFKH-AFDAKAMSMEEYDIVH-LEHEALVLVVTSTFG 58 L tG a L f y L E lvl Vt t g usage_00014.pdb 60 QGDPPDNMKNFWRFIFR-- 76 usage_00057.pdb 58 -GHPPDNAK---------- 65 usage_00144.pdb 57 NGDCPGNG----------- 64 usage_00190.pdb 59 NGDPPENGE---------- 67 usage_00191.pdb 59 NGDPPENGEKFGCALMEMR 77 GdpP N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################