################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:09 2021 # Report_file: c_1141_55.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00045.pdb # 2: usage_00115.pdb # 3: usage_00513.pdb # 4: usage_00514.pdb # 5: usage_00515.pdb # 6: usage_00516.pdb # 7: usage_00517.pdb # 8: usage_00518.pdb # 9: usage_00531.pdb # 10: usage_00532.pdb # 11: usage_00549.pdb # 12: usage_00550.pdb # 13: usage_00704.pdb # 14: usage_00705.pdb # 15: usage_00706.pdb # 16: usage_00765.pdb # 17: usage_00766.pdb # # Length: 92 # Identity: 39/ 92 ( 42.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 92 ( 54.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 92 ( 38.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 ----DPSSEFHHQNLILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 55 usage_00115.pdb 1 ----------------------------ETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVI 32 usage_00513.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00514.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00515.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00516.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00517.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00518.pdb 1 ------------HQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVI 48 usage_00531.pdb 1 -----------------------------TTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 31 usage_00532.pdb 1 -----------------------------TTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 31 usage_00549.pdb 1 --------H---HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 49 usage_00550.pdb 1 --------H---HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 49 usage_00704.pdb 1 --------H---HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 49 usage_00705.pdb 1 SSEF----H---HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 53 usage_00706.pdb 1 --------------NLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 46 usage_00765.pdb 1 --------H---HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 49 usage_00766.pdb 1 ------------HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 48 TTSTTLRYGfLLmLKyPhV e VQkEI qVI usage_00045.pdb 56 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 87 usage_00115.pdb 33 GRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVP 64 usage_00513.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQRFSDLAP 80 usage_00514.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQRFSDLAP 80 usage_00515.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQRFSDLAP 80 usage_00516.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQR------ 74 usage_00517.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQRFSDLAP 80 usage_00518.pdb 49 GSHRLPTLEDRTKMPYTDAVIHEIQRFSDLAP 80 usage_00531.pdb 32 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 63 usage_00532.pdb 32 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 63 usage_00549.pdb 50 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 81 usage_00550.pdb 50 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 81 usage_00704.pdb 50 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 81 usage_00705.pdb 54 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 85 usage_00706.pdb 47 GSHRPPALDDRAKMPYTDAVIHEIQRLG---- 74 usage_00765.pdb 50 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 81 usage_00766.pdb 49 GSHRPPALDDRAKMPYTDAVIHEIQRLGD--- 77 GsHR P l DR kMPYTDAViHEIQR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################