################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:17 2021 # Report_file: c_0545_102.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00302.pdb # 2: usage_00303.pdb # 3: usage_00481.pdb # # Length: 353 # Identity: 33/353 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 247/353 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 106/353 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 --QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 58 usage_00303.pdb 1 --QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 58 usage_00481.pdb 1 NEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQL 60 qQnfntgikdfdfWlsEvEallaSedygKDlasvnnlLKkHqlleadisahedrlKdL usage_00302.pdb 59 NSQADSLMTSSAFD-------TSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFF 111 usage_00303.pdb 59 NSQADSLMTSSAFD-------TSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFF 111 usage_00481.pdb 61 ASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDLE 120 nSqAdsLmtssafd tsQVkdkretingrfqriKsmaaarraklneshrlhqff usage_00302.pdb 112 RDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKL 171 usage_00303.pdb 112 RDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKL 171 usage_00481.pdb 121 QWISEKELVASS-------PEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIER 173 rdmddeEswike edyGrDltgVqnLRkKhkrleaElaAhepaiqgvldtgkkl usage_00302.pdb 172 S-DDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEK 230 usage_00303.pdb 172 S-DDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEK 230 usage_00481.pdb 174 LIDAGHSE--------------AATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRY 219 s Ddntig wkelkqlaaargqrleesLEyqqfvanveeeeawinek usage_00302.pdb 231 MTLV-------------ASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDL 277 usage_00303.pdb 231 MTLV-------------ASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDL 277 usage_00481.pdb 220 FYTGAEILGLIDEKHRE-----------FERDVHLLGVQVQQFQDVATRLQTAYA--GEK 266 mtlv iqgllkkheafetdFtvhkdRvndvcA edl usage_00302.pdb 278 IKKN---------------NHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 315 usage_00303.pdb 278 IKKN---------------NHHVEN---------------------------- 287 usage_00481.pdb 267 AEAIQNKEQEVSAAWQALL---------------------------------- 285 ikkn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################