################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:08 2021 # Report_file: c_0603_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00019.pdb # 8: usage_00069.pdb # 9: usage_00070.pdb # # Length: 106 # Identity: 84/106 ( 79.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/106 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/106 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 SETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 60 usage_00013.pdb 1 SETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 60 usage_00015.pdb 1 -ETAVADLTDFFLVLML-P-----QGIKKGIFELADMIAVNK-----GERRASAAASEYR 48 usage_00016.pdb 1 -ETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 59 usage_00017.pdb 1 -ETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 59 usage_00018.pdb 1 -ETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 59 usage_00019.pdb 1 -ETAVADLTDFFLVLMLPG--------KKGIFELADMIAVNKADDGDGERRASAAASEYR 51 usage_00069.pdb 1 -ETAVADLTDFFLVLL-PGAGDELQGIKKGIFELADI-AVNK------ARRASAAASEYR 51 usage_00070.pdb 1 SETAVADLTDFFLVLMLPG---ELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYR 57 ETAVADLTDFFLVLm g KKGIFELADm AVNK eRRASAAASEYR usage_00012.pdb 61 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 106 usage_00013.pdb 61 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 106 usage_00015.pdb 49 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 94 usage_00016.pdb 60 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 105 usage_00017.pdb 60 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 105 usage_00018.pdb 60 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 105 usage_00019.pdb 52 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 97 usage_00069.pdb 52 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 97 usage_00070.pdb 58 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG 103 AALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################