################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:50 2021 # Report_file: c_0927_105.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00111.pdb # 2: usage_00214.pdb # 3: usage_00215.pdb # 4: usage_00388.pdb # 5: usage_00389.pdb # 6: usage_00390.pdb # # Length: 42 # Identity: 1/ 42 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 42 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 42 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00111.pdb 1 -KFAVAVSGDRVNGPG---ESEEVQIYETDGGNVRLIEKYS- 37 usage_00214.pdb 1 QDLTVKMTD---LQ--T-GKPVGTIELSQNKYGVVFIPELAD 36 usage_00215.pdb 1 QDLTVKMTD---LQ--T-GKPVGTIELSQNKYGVAFIPELAD 36 usage_00388.pdb 1 EKIVVPVQQ---LDPQNGNKDVGTVEITESAYGLVFTPKLHD 39 usage_00389.pdb 1 EKIVVPVQQ---LDPQNGNKDVGTVEITESAYGLVFTPKLHD 39 usage_00390.pdb 1 EKIVVPVQQ---LDPQNGNKDVGTVEITESAYGLVFTPKLHD 39 V l k vgt e yg f p l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################