################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:09:50 2021 # Report_file: c_0354_3.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00008.pdb # 7: usage_00009.pdb # 8: usage_00015.pdb # 9: usage_00047.pdb # 10: usage_00054.pdb # 11: usage_00055.pdb # 12: usage_00056.pdb # 13: usage_00059.pdb # 14: usage_00063.pdb # 15: usage_00064.pdb # 16: usage_00065.pdb # 17: usage_00079.pdb # 18: usage_00080.pdb # 19: usage_00081.pdb # 20: usage_00086.pdb # 21: usage_00087.pdb # 22: usage_00089.pdb # 23: usage_00096.pdb # 24: usage_00097.pdb # 25: usage_00100.pdb # # Length: 104 # Identity: 18/104 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/104 ( 47.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/104 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SEIISEEELREVLK-KDEKSARIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIYLADLG 59 usage_00002.pdb 1 SEIISEEELREVLK-KDEKSARIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIYLADLG 59 usage_00003.pdb 1 SEIISEEELREVLK-KDEKSARIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIYLADLG 59 usage_00004.pdb 1 SEIISEEELREVLK-KDEKSARIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIYLADLG 59 usage_00005.pdb 1 SEIISEEELREVLK-KDEKSAEIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIISLADLG 59 usage_00008.pdb 1 EEVVTEEELRQLIETKEKPRAYVGYEPSGEIHLGHMMTVQKLMDLQEAGFEIIVLLADIH 60 usage_00009.pdb 1 EEVVTEEELRQLIETKEKPRAYVGYEPSGEIHLGHMMTVQKLMDLQEAGFEIIVLLADIH 60 usage_00015.pdb 1 QEVLGEEKLKEILK-ERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLH 59 usage_00047.pdb 1 SEIISEEELREVLK-KDEKSAQIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 usage_00054.pdb 1 SEIISEEELREVLK-KDEKSAHIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLC 59 usage_00055.pdb 1 SEIISEEELREVLK-KDEKSAHIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLC 59 usage_00056.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIILADLG 59 usage_00059.pdb 1 SEIISEEELREVLK-KDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLA 59 usage_00063.pdb 1 SEIISEEELREVLK-KDEKSAGIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIELADLH 59 usage_00064.pdb 1 SEIISEEELREVLK-KDEKSAGIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIELADLH 59 usage_00065.pdb 1 SEIISEEELREVLK-KDEKSAGIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIELADLH 59 usage_00079.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 usage_00080.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 usage_00081.pdb 1 SEIISEEELREVLK-KDEKSAIIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLF 59 usage_00086.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIVLADLH 59 usage_00087.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIIVLADLH 59 usage_00089.pdb 1 SEIISEEELREVLK-KDEKSAEIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIISLADLG 59 usage_00096.pdb 1 SEIISEEELREVLK-KDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 usage_00097.pdb 1 SEIISEEELREVLK-KDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 usage_00100.pdb 1 SEIISEEELREVLK-KDEKSALIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLH 59 E EEeLr k a G epsG iHlgh K Dlq AGf ii lAD usage_00001.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00002.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00003.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00004.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00005.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00008.pdb 61 AYLNEK-G----TFEEIAEVADYNKKVFIALGLDESRAKFVL-- 97 usage_00009.pdb 61 AYLNEK-G----TFEEIAEVADYNKKVFIALGLDESRAKFVL-- 97 usage_00015.pdb 60 AYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIK-- 101 usage_00047.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00054.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00055.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00056.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00059.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00063.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00064.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00065.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00079.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVYGS 95 usage_00080.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00081.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVYGS 95 usage_00086.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00087.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00089.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00096.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00097.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 usage_00100.pdb 60 AYLNQK-G----ELDEIRKIGDYNKKVFEAMGLKAK---YVY-- 93 AYLn k g ei dynKkvf a Gl v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################