################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:55 2021 # Report_file: c_0757_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00004.pdb # 2: usage_00259.pdb # 3: usage_00260.pdb # 4: usage_00261.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00264.pdb # 8: usage_00265.pdb # 9: usage_00266.pdb # 10: usage_00267.pdb # 11: usage_00305.pdb # # Length: 90 # Identity: 58/ 90 ( 64.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/ 90 ( 97.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 90 ( 2.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 60 usage_00259.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIE-LQRIKQQGLNIKPRILILT 59 usage_00260.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIE-LQRIKQQGLNIKPRILILT 59 usage_00261.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIE-LQRIKQQGLNIKPRILILT 59 usage_00262.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIE-LQRIKQQGLNIKPRILILT 59 usage_00263.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 60 usage_00264.pdb 1 -NVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 59 usage_00265.pdb 1 -NVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 59 usage_00266.pdb 1 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 60 usage_00267.pdb 1 -NVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILT 59 usage_00305.pdb 1 SRLLILSPHGYFGQDNVLGLPDTGGQVVYILDQVRALEKEMHDRLQLQGVQVEPKILIVT 60 nvvILSPHGYFaQDNVLGyPDTGGQVVYILDQVRALEiE lqRikqQGlnikPrILIlT usage_00004.pdb 61 RLLPDAVGTTCGERLERVYDSEYCDILRVP 90 usage_00259.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00260.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00261.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00262.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00263.pdb 61 RLLPDAVGTTCGERLERVYDSEYCDILRVP 90 usage_00264.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00265.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00266.pdb 61 RLLPDAVGTTCGERLERVYDSEYCDILRVP 90 usage_00267.pdb 60 RLLPDAVGTTCGERLERVYDSEYCDILRVP 89 usage_00305.pdb 61 RLIPDAGDTTCNQRLEKVSGCTNTWILRVP 90 RLlPDAvgTTCgeRLErVydseycdILRVP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################