################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:36:05 2021 # Report_file: c_1484_286.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_01128.pdb # 2: usage_01129.pdb # 3: usage_01130.pdb # 4: usage_01131.pdb # 5: usage_01141.pdb # 6: usage_01165.pdb # 7: usage_01166.pdb # 8: usage_01258.pdb # 9: usage_01259.pdb # 10: usage_01260.pdb # 11: usage_01261.pdb # 12: usage_01262.pdb # 13: usage_01268.pdb # 14: usage_01269.pdb # 15: usage_01272.pdb # 16: usage_02441.pdb # 17: usage_03552.pdb # 18: usage_03553.pdb # 19: usage_03554.pdb # 20: usage_03568.pdb # 21: usage_03569.pdb # 22: usage_03570.pdb # 23: usage_03571.pdb # 24: usage_03572.pdb # 25: usage_03573.pdb # 26: usage_03575.pdb # 27: usage_03576.pdb # 28: usage_03579.pdb # 29: usage_03580.pdb # 30: usage_03585.pdb # 31: usage_03586.pdb # 32: usage_03589.pdb # 33: usage_04012.pdb # 34: usage_04013.pdb # 35: usage_04015.pdb # 36: usage_04016.pdb # 37: usage_04182.pdb # 38: usage_04183.pdb # 39: usage_04811.pdb # 40: usage_04812.pdb # 41: usage_04813.pdb # 42: usage_04814.pdb # 43: usage_04879.pdb # 44: usage_04880.pdb # 45: usage_04881.pdb # 46: usage_04882.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 34 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 34 ( 73.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01128.pdb 1 VDFLAEANDQELVGLTKQLF-------------- 20 usage_01129.pdb 1 VDFLAEANDQELVGLTKQLF-------------- 20 usage_01130.pdb 1 VDFLAEANDQELVGLTKQLF-------------- 20 usage_01131.pdb 1 VDFLAEANDQELVGLTKQLF-------------- 20 usage_01141.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_01165.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01166.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01258.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_01259.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_01260.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01261.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01262.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_01268.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01269.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_01272.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_02441.pdb 1 --------P-DVVWEYVQNNELAPLSKREAI--- 22 usage_03552.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03553.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03554.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03568.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03569.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03570.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03571.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03572.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03573.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_03575.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03576.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03579.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03580.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03585.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03586.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_03589.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04012.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04013.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04015.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_04016.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04182.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04183.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_04811.pdb 1 ----------FQEYFFANCQNQ--NIADYLKSVL 22 usage_04812.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_04813.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04814.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04879.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04880.pdb 1 ----------AVDFLAEAMNDQ--ELVGLTKQLF 22 usage_04881.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 usage_04882.pdb 1 -----------VDFLAEAMNDQ--ELVGLTKQLF 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################