################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:58 2021 # Report_file: c_0833_65.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00092.pdb # 2: usage_00206.pdb # 3: usage_00232.pdb # 4: usage_00366.pdb # 5: usage_00464.pdb # # Length: 88 # Identity: 4/ 88 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 88 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 88 ( 42.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00092.pdb 1 THAELRARVEAVAARLHADGL-RPQQRVAVVAP-----NSADVVIAILALHRLG------ 48 usage_00206.pdb 1 ---------DGTANRELAGEQA--TKVARAI-RASGMP----AVIIDTAMRPNPALVDLA 44 usage_00232.pdb 1 TFAELFAASKRMAEQLAAHSV-RKGDTAAILLQ-----NRAEMVYAVHACFLLG------ 48 usage_00366.pdb 1 THAELRARVEAVAARLHADGL-RPQQRVAVVAP-----NSADVVIAILALHRLG------ 48 usage_00464.pdb 1 THAELRARVEAVAARLHADGL-RPQQRVAVVAP-----NSADVVIAILALHRLG------ 48 A rl A a Via A lg usage_00092.pdb 49 AVPALLNP--RLKSAELAELIKRG---- 70 usage_00206.pdb 45 -RTMDAHYIA--LPRATAHKMADVLGAA 69 usage_00232.pdb 49 VKAVLLNT--KLSTHERLFQLEDSG--- 71 usage_00366.pdb 49 AVPALLNP--RLKSAELAELIKRGE--- 71 usage_00464.pdb 49 AVPALLNP--RLKSAELAELIKRG---- 70 lln e a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################