################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:25 2021 # Report_file: c_0875_96.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00109.pdb # 2: usage_00155.pdb # 3: usage_00169.pdb # 4: usage_00170.pdb # 5: usage_00576.pdb # 6: usage_00650.pdb # 7: usage_00652.pdb # 8: usage_00654.pdb # 9: usage_00656.pdb # 10: usage_00658.pdb # 11: usage_00824.pdb # 12: usage_00991.pdb # 13: usage_00994.pdb # 14: usage_00995.pdb # # Length: 108 # Identity: 45/108 ( 41.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/108 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/108 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 --AEFSMIFQLCQEILNSATQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRTRFLEV 58 usage_00155.pdb 1 MCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 60 usage_00169.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00170.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00576.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00650.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00652.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00654.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00656.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00658.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00824.pdb 1 --AEFSMIFQLCQEILNSATQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRTRFLEV 58 usage_00991.pdb 1 MCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 60 usage_00994.pdb 1 ----FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 56 usage_00995.pdb 1 ---------------MENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNV 45 L ATLETLLRF NWIPLGYIFET LI TL FL V usage_00109.pdb 59 PEFRNVTLQCLTEIGGLQTGGPGQPHTYDEQLIKMFTEVLTTISNI-- 104 usage_00155.pdb 61 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFVTLFTLTMMQLKQM-- 100 usage_00169.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQML- 97 usage_00170.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQML- 97 usage_00576.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFVTLFTLTMMQLKQMLP 98 usage_00650.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQMLP 98 usage_00652.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 96 usage_00654.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 96 usage_00656.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 96 usage_00658.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 96 usage_00824.pdb 59 PEFRNVTLQCLTEIGGLQTGGPGQPHTYDEQLIKMFTEVLTTISNI-- 104 usage_00991.pdb 61 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFVTLFTLTMMQLKQML- 101 usage_00994.pdb 57 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 96 usage_00995.pdb 46 PMFRNVSLKCLTEIAGVSVS-----Q-YEEQFETLFTLTMMQLKQM-- 85 P FRNV L CLTEI G Y EQ FT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################