################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:15:05 2021 # Report_file: c_0834_95.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00015.pdb # 7: usage_00031.pdb # 8: usage_00350.pdb # 9: usage_00478.pdb # 10: usage_00587.pdb # 11: usage_00887.pdb # 12: usage_00888.pdb # 13: usage_00903.pdb # 14: usage_00904.pdb # # Length: 73 # Identity: 13/ 73 ( 17.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 73 ( 43.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 73 ( 28.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLSME--GAAIMGSYAERAQASLDAGCDMILVCNNRKG 57 usage_00011.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLS----------SYAERAQASLDAGCDMILVCNNRKG 49 usage_00012.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLSME--GAAIMGSYAERAQASLDAGCDMILVCNNRKG 57 usage_00013.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLS----------SYAERAQASLDAGCDMILVCNNRKG 49 usage_00014.pdb 1 -PYWLKTVLRQELGFDGVIFSNDLSM---------SYAERAQASLDAGCDMILVCNNRKG 50 usage_00015.pdb 1 -PYWLKTVLRQELGFDGVIFSNDLSM--------GSYAERAQASLDAGCDMILVCNNRKG 51 usage_00031.pdb 1 -SYWLKQVLREELGFKGIVFSDDLSME--GAAVMGGPVERSHQALVAGCDMILICNKREA 57 usage_00350.pdb 1 -SYWLKQVLREELGFKGIVFSDDLSEGA----AVGGPVERSHQALVAGCD-ILICNKREA 54 usage_00478.pdb 1 -KKLITEVLREKLNFKGLVLSDAMEMK-A-ISENFSVEEAVRFFIEAGGNMILLDNF-RD 56 usage_00587.pdb 1 -SYWLKQVLREELGFKGIVFSDDLSME--GAAVMGGPVERSHQALVAGCDMILICNKREA 57 usage_00887.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLSM--------GSYAERAQASLDAGCDMILVCNNRKG 51 usage_00888.pdb 1 -PYWLKTVLRQELGFDGVIFSDDLSM--------GSYAERAQASLDAGCDMILVCNNRKG 51 usage_00903.pdb 1 -SYWLKQVLREELGFKGIVFSDDLSM------VMGGPVERSHQALVAGCDMILICNKREA 53 usage_00904.pdb 1 SSYWLKQVLREELGFKGIVFSDDLSM------VMGGPVERSHQALVAGCDMILICNKREA 54 ywlk VLR eLgF G fS dls Er l AGcd IL cN usage_00010.pdb 58 AVSVL-------- 62 usage_00011.pdb 50 AVSVL-------- 54 usage_00012.pdb 58 AVSVLDNL----- 65 usage_00013.pdb 50 AVSVLDNL----- 57 usage_00014.pdb 51 AVSVL-------- 55 usage_00015.pdb 52 AVSVL-------- 56 usage_00031.pdb 58 AVEVL-------- 62 usage_00350.pdb 55 AVEVLDNL----- 62 usage_00478.pdb 57 LPVYYESLKKLIE 69 usage_00587.pdb 58 AVEVLDN------ 64 usage_00887.pdb 52 AVSVLDNL----- 59 usage_00888.pdb 52 AVSVL-------- 56 usage_00903.pdb 54 AVEVLD------- 59 usage_00904.pdb 55 AVEVL-------- 59 av vl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################