################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:14 2021 # Report_file: c_1471_202.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00340.pdb # 2: usage_01113.pdb # 3: usage_01529.pdb # 4: usage_01611.pdb # 5: usage_01647.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 36 ( 2.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 36 ( 63.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00340.pdb 1 ATD--CEYMEKYRELARKHNIW-----L-SL-G--- 24 usage_01113.pdb 1 ----YRLMNEVDDLLQQVLDCP-----A-AE-SL-S 24 usage_01529.pdb 1 ----AQQAILTALDMMNDGNDW-----IVD-ID-LE 25 usage_01611.pdb 1 ---FTRDIQELVKMMS----P-KED-YPIEI-Q-LS 25 usage_01647.pdb 1 ---FTRDIQELVKMM-------KEDYPIEIQ-L-S- 23 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################