################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:42:14 2021 # Report_file: c_0236_9.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # 8: usage_00031.pdb # 9: usage_00032.pdb # 10: usage_00033.pdb # 11: usage_00034.pdb # 12: usage_00035.pdb # 13: usage_00036.pdb # 14: usage_00037.pdb # 15: usage_00038.pdb # 16: usage_00072.pdb # 17: usage_00073.pdb # 18: usage_00074.pdb # 19: usage_00075.pdb # 20: usage_00076.pdb # 21: usage_00077.pdb # 22: usage_00078.pdb # 23: usage_00079.pdb # 24: usage_00080.pdb # 25: usage_00112.pdb # 26: usage_00148.pdb # 27: usage_00149.pdb # 28: usage_00150.pdb # # Length: 121 # Identity: 105/121 ( 86.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/121 ( 86.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/121 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00007.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00008.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00027.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00028.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00029.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00030.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00031.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00032.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00033.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00034.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00035.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00036.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00037.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00038.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00072.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00073.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00074.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00075.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00076.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00077.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00078.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00079.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00080.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00112.pdb 1 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 60 usage_00148.pdb 1 KVAINGFGRIGRNFLRCWHGKDSP-LDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 59 usage_00149.pdb 1 KVAINGFGRIGRNFLRCWHGKDSP-LDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 59 usage_00150.pdb 1 KVAINGFGRIGRNFLRCWHGKDSP-LDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA 59 KVAINGFGRIGRNFLRCWHG LDVVVIND GGVKQASHLLKYDSILGTFDADVKTA usage_00006.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 120 usage_00007.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00008.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00027.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00028.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00029.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 120 usage_00030.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00031.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00032.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00033.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00034.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00035.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00036.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00037.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00038.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00072.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 120 usage_00073.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00074.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00075.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00076.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 120 usage_00077.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00078.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00079.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00080.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 119 usage_00112.pdb 61 GDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 120 usage_00148.pdb 60 -GDSAISVGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 117 usage_00149.pdb 60 -GDSAISVGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 117 usage_00150.pdb 60 -GDSAISVGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI- 117 GKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI usage_00006.pdb 121 A 121 usage_00007.pdb - usage_00008.pdb - usage_00027.pdb - usage_00028.pdb - usage_00029.pdb 121 A 121 usage_00030.pdb - usage_00031.pdb - usage_00032.pdb - usage_00033.pdb - usage_00034.pdb - usage_00035.pdb - usage_00036.pdb - usage_00037.pdb - usage_00038.pdb - usage_00072.pdb 121 A 121 usage_00073.pdb - usage_00074.pdb - usage_00075.pdb - usage_00076.pdb 121 A 121 usage_00077.pdb - usage_00078.pdb - usage_00079.pdb - usage_00080.pdb - usage_00112.pdb - usage_00148.pdb - usage_00149.pdb - usage_00150.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################