################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:04 2021 # Report_file: c_1263_61.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00027.pdb # 2: usage_00132.pdb # 3: usage_00134.pdb # 4: usage_00364.pdb # 5: usage_00387.pdb # 6: usage_00388.pdb # 7: usage_00421.pdb # 8: usage_00565.pdb # 9: usage_00688.pdb # 10: usage_00698.pdb # 11: usage_00707.pdb # 12: usage_00708.pdb # 13: usage_00752.pdb # 14: usage_00753.pdb # 15: usage_00754.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 46 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 46 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 G-SITSVQAIYVPAD---DLTDPA---PATTFAHLD--ATTVL--- 34 usage_00132.pdb 1 -------QAVYVPAD---DLTDPA---PATTFAHLD--ATTVL-SR 30 usage_00134.pdb 1 --------AVYVPAD---DLTDPA---PATTFAHLD--ATTVL-SR 29 usage_00364.pdb 1 -PHAL--LLISIDGLRADMLDRGITPNLSHLAREGVRA-------- 35 usage_00387.pdb 1 G-SVTSVQAVYVPAD---DLTDPA---PATTFAHLD--ATTVL-S- 35 usage_00388.pdb 1 G-SVTSVQAVYVPAD---DLTDPA---PATTFAHLD--ATTVL-S- 35 usage_00421.pdb 1 -------QAIYVPAD---DLTDPA---PATTFAHLD--ATTVL-S- 29 usage_00565.pdb 1 -------QAVYVPAD---DLTDPA---PATTFAHLD--ATTVL-S- 29 usage_00688.pdb 1 G-SITSVQAVYVPAD---DLTDPS---PATTFAHLD--ATVVLS-- 35 usage_00698.pdb 1 G-SVTSVQAVYVPAD---DLTDPA---PATTFAHLD--ATTVL--- 34 usage_00707.pdb 1 -------QAVYVPAD---DLTDPA---PATTFAHLD--ATTVL--- 28 usage_00708.pdb 1 -------QAVYVPAD---DLTDPA---PATTFAHLD--ATTVL-S- 29 usage_00752.pdb 1 -------QAIYVPAD---DYTDPA---PATTFAHLD--ATTNL-ER 30 usage_00753.pdb 1 -------QAIYVPAD---DYTDPA---PATTFAHLD--ATTNL-ER 30 usage_00754.pdb 1 -------QAIYVPAD---DYTDPA---PATTFAHLD--ATTNL-ER 30 a yvpad d tdp pattfahld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################