################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:56 2021 # Report_file: c_0900_74.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00176.pdb # 2: usage_00523.pdb # 3: usage_00524.pdb # 4: usage_00525.pdb # 5: usage_00631.pdb # 6: usage_00645.pdb # 7: usage_00729.pdb # 8: usage_00759.pdb # 9: usage_00933.pdb # 10: usage_01115.pdb # 11: usage_01216.pdb # 12: usage_01295.pdb # # Length: 74 # Identity: 2/ 74 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 74 ( 5.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 74 ( 58.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 -----HVTHHRRP---------EG--DVTLRCWALGFY--PAEITLTWQLNGEEL----T 38 usage_00523.pdb 1 -----SVTLFPPSSE---ELE-TN--KATLVCTITDFY--PGVVTVDWKVDGTPV----T 43 usage_00524.pdb 1 -----SVTLFPPSSE---ELE-TN--KATLVCTITDFY--PGVVTVDWKVDGTPV----T 43 usage_00525.pdb 1 -----SVTLFPPSSE---ELE-TN--KATLVCTITDFY--PGVVTVDWKVDGTPV----T 43 usage_00631.pdb 1 RTDSPKAHVTHH-SR--P----ED--KVTLRCWALGFY--PADITLTWQLNGEEL----I 45 usage_00645.pdb 1 PKAAPSVTLFPPSS-------------ATLVCLISDFY--PGAVTVAWKADSSPGVETT- 44 usage_00729.pdb 1 -----SVFIFPPSDE---QLK-SG--TASVVCLLNNFY--PREAKVQWKVDNALQ----S 43 usage_00759.pdb 1 -----SVFLFPPKPK---DTL-EASRTPEVTCVVVDVSHEDPEVKFNWYVDGVEV----H 47 usage_00933.pdb 1 PKASPLVTLFPPSSE---ELQ-AN--KATLVCLISDFY--PGVVKVAWKADGNSV----N 48 usage_01115.pdb 1 PRAAPEVYAFATPEWPGS----RD--KRTLACLIQNFM--PEDISVQWLHNEVQL----P 48 usage_01216.pdb 1 PKSSPSVNLFPPSSE---ELK-TK--KATLVCTITEFY--PGAVRVDWKADGTPV----T 48 usage_01295.pdb 1 -TKGPSVFPLAPSSK------SGG--TAALGCLVKDYF--PEPVTVSWN--SGAL----T 43 v C p W usage_00176.pdb 39 --QEMELV------ 44 usage_00523.pdb 44 --QGMETT------ 49 usage_00524.pdb 44 --QGMETT------ 49 usage_00525.pdb 44 --QGMETT------ 49 usage_00631.pdb 46 --QDMELV------ 51 usage_00645.pdb -------------- usage_00729.pdb 44 --GNSQESV----- 50 usage_00759.pdb 48 --NA-KTKPREEQY 58 usage_00933.pdb 49 --TGVETT------ 54 usage_01115.pdb 49 DAR-HSTTQPRKTK 61 usage_01216.pdb 49 --QGDETT------ 54 usage_01295.pdb 44 --SGVHTF------ 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################