################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:40 2021 # Report_file: c_1349_77.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00053.pdb # 2: usage_00108.pdb # 3: usage_00244.pdb # 4: usage_00245.pdb # 5: usage_00304.pdb # 6: usage_00477.pdb # 7: usage_00478.pdb # 8: usage_00498.pdb # 9: usage_00698.pdb # # Length: 32 # Identity: 0/ 32 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 32 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 32 ( 68.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 P---NLDPILEGIQ--KKQNFKEVA------- 20 usage_00108.pdb 1 -RFDDAVVQSDMKH--WPFMVVN--------- 20 usage_00244.pdb 1 -TWNDPSVQQDIKF--LPFKVVE--------- 20 usage_00245.pdb 1 -TWNDPSVQQDIKF--LPFKVVE--------- 20 usage_00304.pdb 1 --------LELSVYEGIPHL-----LTEVVTD 19 usage_00477.pdb 1 -TWNDPSVQQDIKF--LPFKVVE--------- 20 usage_00478.pdb 1 -TWNDPSVQQDIKF--LPFKVVE--------- 20 usage_00498.pdb 1 -KFGDPVVQSDMKH--WPFQVIN--------- 20 usage_00698.pdb 1 -KFGDPVVQSDMKH--WPFQVIN--------- 20 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################