################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:13 2021 # Report_file: c_1360_15.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00095.pdb # 2: usage_00163.pdb # 3: usage_00171.pdb # 4: usage_00188.pdb # 5: usage_00338.pdb # 6: usage_00339.pdb # 7: usage_00340.pdb # 8: usage_00341.pdb # 9: usage_00477.pdb # 10: usage_00535.pdb # 11: usage_00680.pdb # # Length: 39 # Identity: 10/ 39 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 39 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 39 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 -QAAYAASKAGVAGMTLPIAR-DL-SRNAIRVMTIAPG- 35 usage_00163.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVVTIAPGL 35 usage_00171.pdb 1 ---AYSASKGGIVGMTLPIAR-DL-APIGIRVVTIAPG- 33 usage_00188.pdb 1 GQAAYSASKGGVVGMTLPIAR-DL-ASHRIRVMTIAPGL 37 usage_00338.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVMTIAPG- 34 usage_00339.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVMTIAPGL 35 usage_00340.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVMTIAPG- 34 usage_00341.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVMTIAPG- 34 usage_00477.pdb 1 --AAYSASKGGIVGMTLPIAR-DL-APIGIRVMTIAPG- 34 usage_00535.pdb 1 -QAAYSASKGGVAAMTLPVAR-EL-ARHGIRVMTIAPGI 36 usage_00680.pdb 1 --PVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGA 37 aY AsK G mTlp Ar l Irv TiaPG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################