################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:03 2021 # Report_file: c_0708_44.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00030.pdb # 2: usage_00033.pdb # 3: usage_00073.pdb # 4: usage_00092.pdb # 5: usage_00101.pdb # 6: usage_00113.pdb # 7: usage_00115.pdb # 8: usage_00116.pdb # 9: usage_00121.pdb # 10: usage_00137.pdb # 11: usage_00138.pdb # 12: usage_00141.pdb # 13: usage_00148.pdb # 14: usage_00305.pdb # 15: usage_00317.pdb # 16: usage_00406.pdb # 17: usage_00442.pdb # 18: usage_00443.pdb # 19: usage_00469.pdb # 20: usage_00497.pdb # 21: usage_00584.pdb # # Length: 96 # Identity: 3/ 96 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 96 ( 5.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 96 ( 53.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 ----TRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLI-E-SVVP----S 35 usage_00033.pdb 1 ---TMRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLIME-SVVP----S 37 usage_00073.pdb 1 ---TLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 37 usage_00092.pdb 1 ---TMRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLIME-SVVP----S 37 usage_00101.pdb 1 ---SISWLKNGREFR--G-EH-R--IGGIKLRH--Q--Q-----WSLVME-SVVP----S 37 usage_00113.pdb 1 ---TMRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLIME-SVVP----S 37 usage_00115.pdb 1 ---TLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 37 usage_00116.pdb 1 ---TLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 37 usage_00121.pdb 1 ---EYSWFKDGISMLTT--RAFM--NSSFTIDP--K--S-----GDLIFD-PVTA----F 39 usage_00137.pdb 1 ---TLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 37 usage_00138.pdb 1 ---TLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 37 usage_00141.pdb 1 ---TIEWYKGGERVE--TDKD-DPRSHRMLLP------S-----GSLFFL-RIVHGRKSR 42 usage_00148.pdb 1 ---TMRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLIME-SVVP----S 37 usage_00305.pdb 1 ---TLHWLHNGQPLR--E-S-----K-IIHVEY--Y-QEGEISEGCLLFN-KPTH----Y 40 usage_00317.pdb 1 ---HIRWKLNGTDVD--I-GM-D--F--RYSVV-----D-----GSLLIN-NPNK----T 34 usage_00406.pdb 1 -RPKIVWNKKGKKVS--N-Q-------RFEVIE--FDDG-S--GSVLRIQPLRTP----R 40 usage_00442.pdb 1 -QPTLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 39 usage_00443.pdb 1 -QPTLRWLKNGKEFK--P-DH-R--IGGYKVRY--A--T-----WSIIMD-SVVP----S 39 usage_00469.pdb 1 LDIMFAWYFNGALTD--F-KK-D--GSHFEKVGGSS--S-----GDLMIR-NIQL----K 42 usage_00497.pdb 1 ---QVTWFREGHKII--P-S-----SRIAITL------E-----NQLVIL-ATTA----S 33 usage_00584.pdb 1 ---TMRWLKNGKEFK--Q-EH-R--IGGYKVRN--Q--H-----WSLIME-SVVP----S 37 W G usage_00030.pdb 36 -DKGNYTCVVENE-Y--GSINHTYHLDV-V------ 60 usage_00033.pdb 38 -DKGNYTCVVENE-Y--GSINHTYHLDV-VER---- 64 usage_00073.pdb 38 -DKGNYTCIVENE-Y--GSINHTYQLDV-VE----- 63 usage_00092.pdb 38 -DKGNYTCVVENE-Y--GSINHTYHLDV-VERS--- 65 usage_00101.pdb 38 -DRGNYTCVVENK-F--GSIRQTYTLDV-LERSPHR 68 usage_00113.pdb 38 -DKGNYTCVVENE-Y--GSINHT------------- 56 usage_00115.pdb 38 -DKGNYTCIVENE-Y--GSINHTYQLDV-VE----- 63 usage_00116.pdb 38 -DKGNYTCIVENE-Y--GSINHTYQLDV-VE----- 63 usage_00121.pdb 40 -DSGEYYCQAQNG-YGTAMRSEAAHMDA-VE----- 67 usage_00137.pdb 38 -DKGNYTCIVENE-Y--GSINHTYQLDV-VE----- 63 usage_00138.pdb 38 -DKGNYTCIVENE-Y--GSINHTYQLDV-VE----- 63 usage_00141.pdb 43 PDEGVYVCVARNY-L--GEAVSHDASLE-------- 67 usage_00148.pdb 38 -DKGNYTCVVENE-Y--GSINHT------------- 56 usage_00305.pdb 41 -NNGNYTLIAKNP-L--GTANQT------------- 59 usage_00317.pdb 35 QDAGTYQCIATNS-F--GTIVSREAKLQFAYLEN-- 65 usage_00406.pdb 41 -DEAIYECVASNN-V--GEISVSTRLTV-LR----- 66 usage_00442.pdb 40 -DKGNYTCIVENE-Y--GSINHTYQLDV-VERSP-H 69 usage_00443.pdb 40 -DKGNYTCIVENE-Y--GSINHTYQLDV-VERSP-H 69 usage_00469.pdb 43 -HSGKYVCMVQTG-V--DSVSSAAELIV-RG----- 68 usage_00497.pdb 34 -DAGAYYVQAVNEKN--GENKT-------------- 52 usage_00584.pdb 38 -DKGNYTCVVENE-Y--GSINHTYHLDV-VE----- 63 g Y n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################