################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:04 2021 # Report_file: c_1123_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00460.pdb # 2: usage_00467.pdb # 3: usage_00468.pdb # 4: usage_00527.pdb # 5: usage_00528.pdb # 6: usage_00666.pdb # # Length: 120 # Identity: 15/120 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/120 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/120 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00460.pdb 1 --------------ALLEAAAVMGAIMG-GGSDEEIERLRSYARCIGLMFQVVDDVLD-- 43 usage_00467.pdb 1 --------------------VQAGLILG-QAPEAQWPAYLQFADAFGLAFQIYDDILDVV 39 usage_00468.pdb 1 ----------EKTGALLHYAVQAGLILG-QAPEAQWPAYLQFADAFGLAFQIYDDILDVV 49 usage_00527.pdb 1 --------------------VQAGLILG-QAPEAQWPAYLQFADAFGLAFQIYDDILDVV 39 usage_00528.pdb 1 ----------EKTGALLHYAVQAGLILG-QAPEAQWPAYLQFADAFGLAFQIYDDILDVV 49 usage_00666.pdb 1 SLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLT 60 v G i g q q A a GLaFQ DDilD usage_00460.pdb 44 -K--------LTYPRLMGVEKSKEYAERLNIEAREHLLGFD-IDKVAPLVSLADYIV--- 90 usage_00467.pdb 40 ---S--DEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFD-TE 93 usage_00468.pdb 50 --SS----AKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFD-TE 102 usage_00527.pdb 40 ---SDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFD-T- 94 usage_00528.pdb 50 ---S-----KNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFD-T- 99 usage_00666.pdb 61 NK--------ATYPKLLGLDGAKALVVRLHEQAIAQISEFG-D-KSQPLTDLANYIID-- 108 TYP lGl ga a l g L Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################