################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:32 2021 # Report_file: c_1031_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00194.pdb # 2: usage_00246.pdb # 3: usage_00249.pdb # 4: usage_00250.pdb # 5: usage_00251.pdb # 6: usage_00252.pdb # # Length: 73 # Identity: 4/ 73 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 73 ( 19.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 73 ( 63.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00194.pdb 1 -----------RWAVGGGSQSQIGYIHRCAALRDNTFVL-VAGAFDIDPIRGSAFGEQL- 47 usage_00246.pdb 1 DDEVPLYFSGM------------GPKGAKLAGMYGDHLMTVAA--------APSTLKNVT 40 usage_00249.pdb 1 -----------RLGVGGG--AFIGAVHRIAARLDDHYEL-VAGALSSTPEKAEASGREL- 45 usage_00250.pdb 1 -----------RLGVGGG--AFIGAVHRIAARLDDHYEL-VAGALSSTPEKAEASGREL- 45 usage_00251.pdb 1 -----------RLGV-GG--AFIGAVHRIAARLDDHYEL-VAGALSSTPEKAEASGREL- 44 usage_00252.pdb 1 -----------RLGVGGG----IGAVHRIAARLDDHYEL-VAGALSSTPEKAEASGREL- 43 G hr aA d l VAg a a g l usage_00194.pdb 48 ------------G 48 usage_00246.pdb 41 IPKFEEGAREAG- 52 usage_00249.pdb ------------- usage_00250.pdb 46 ------------G 46 usage_00251.pdb 45 ------------G 45 usage_00252.pdb 44 ------------G 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################