################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:48 2021 # Report_file: c_0258_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00022.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00048.pdb # 7: usage_00056.pdb # 8: usage_00057.pdb # 9: usage_00058.pdb # # Length: 156 # Identity: 18/156 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/156 ( 19.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/156 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ----LHALLTLAHQLKRG----ERVA-NLHGKVLGLVFLKASTRTRVSFTVAMYQLGGQV 51 usage_00018.pdb 1 DEAQLHALLTLAHQLKRG----ERVA-NLHGKVLGLVFLKASTRTRVSFTVAMYQLGGQV 55 usage_00022.pdb 1 -AEEIWTILETAKMFKIWQKIGKP-HRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHA 58 usage_00036.pdb 1 TRDELEAVFTVADTLRYLRENNIS-TKIFDSGLGISLFRDNSTRTRFSFASACNLLGLEV 59 usage_00037.pdb 1 --------------------------RPYAGKVLAMIFEKLSTRTRVSFDVGMRQLGGET 34 usage_00048.pdb 1 DDEELLAILYTSKQFEKILKNNED-SKYLENKVFCSVFLEPSTRTRCSFDAAILKLGSKV 59 usage_00056.pdb 1 TQEEIISLIEFAIYLKKNK---Q--EPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHG 55 usage_00057.pdb 1 TQEEIISLIEFAIYLKKNK---Q--EPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHG 55 usage_00058.pdb 1 TQEEIISLIEFAIYLKKNK---Q--EPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHG 55 k F STRTR SF LG usage_00017.pdb 52 IDL-------------EPVRDTARVLGRYVDGLAIRTF-----AQTELEEYAHYA----- 88 usage_00018.pdb 56 IDL-------------EPVRDTARVLGRYVDGLAIRTF-----AQTELEEYAHYA----- 92 usage_00022.pdb 59 LYLNA---QDLQLRRGETIADTARVLSRYVDAIMARVY-----DHKDVEDLAKYA----- 105 usage_00036.pdb 60 QDL-------------ETVRETANMISFMADIIGIRDDMYIGKGNAYMHEVSESVQEGYK 106 usage_00037.pdb 35 IMLTG---SEMQLGRSETIADTAKVLSRYVDAIMIRTT-----AHERMLELAEYA----- 81 usage_00048.pdb 60 LNITDMNSTSF--YKGETVEDAFKILSTYVDGIIYRDP-----SKKNVDIAVSSS----- 107 usage_00056.pdb 56 MFLNG---KEMQMQRGETVSDTAKVLSHYIDGIMIRTF-----SHADVEELAKES----- 102 usage_00057.pdb 56 MFLNG---KEMQMQRGETVSDTAKVLSHYIDGIMIRTF-----SHADVEELAKES----- 102 usage_00058.pdb 56 MFLNG---KEMQMQRGETVSDTAKVLSHYIDGIMIRTF-----SHADVEELAKES----- 102 l E dta l y D R usage_00017.pdb 89 ------GIPVINALTDH-EHPCQVVADLLTIREN-- 115 usage_00018.pdb 93 ------GIPVINALTDH-EHPCQVVADLLTIREN-- 119 usage_00022.pdb 106 ------TVPVINGLSDF-SHPCQALADYMTIWEKKG 134 usage_00036.pdb 107 DGVLEQRPTLVNLQCDI-DHPTQAMADALHLIHE-- 139 usage_00037.pdb 82 ------TVPVINALTDD-THPCQIMADVLTYEEH-- 108 usage_00048.pdb 108 ------SKPIINAGNGTGEHPTQSLLDFYTIHNYFP 137 usage_00056.pdb 103 ------SIPVINGLTDD-HHPCQALADLMTIYEETN 131 usage_00057.pdb 103 ------SIPVINGLTDD-HHPCQALADLMTIYEE-- 129 usage_00058.pdb 103 ------SIPVINGLTDD-HHPCQALADLMTIYEE-- 129 p iN d HP Q aD t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################