################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:31 2021 # Report_file: c_0870_19.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00021.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00165.pdb # 5: usage_00179.pdb # 6: usage_00180.pdb # 7: usage_00219.pdb # 8: usage_00220.pdb # 9: usage_00221.pdb # 10: usage_00222.pdb # 11: usage_00223.pdb # 12: usage_00224.pdb # 13: usage_00225.pdb # # Length: 61 # Identity: 9/ 61 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 61 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 61 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 EPTRRRLVQLLTSGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDGRFRYYRL-- 58 usage_00072.pdb 1 --RRLQIL-MLLDNELSVGELSSRLELSQSALSQHLAWLRRDGLVNTRKEAQTVFYTL-- 55 usage_00073.pdb 1 --RRLQIL-MLLDNELSVGELSSRLELSQSALSQHLAWLRRDGLVNTRKEAQTVFYTL-- 55 usage_00165.pdb 1 NGRRLQILDLLAQGERAVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRI-- 58 usage_00179.pdb 1 TPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLGLVVGDRAGRSIVYS--- 57 usage_00180.pdb 1 TPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLGLVVGDRAGRSIVYS--- 57 usage_00219.pdb 1 -PKRLLILDSLVKEE-AVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYS--- 55 usage_00220.pdb 1 NPKRLLILDSLVKEE-AVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSS-- 57 usage_00221.pdb 1 NPKRLLILDSLVKEE-AVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSS-- 57 usage_00222.pdb 1 NPKRLLILDSLVKEE-AVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSS-- 57 usage_00223.pdb 1 -PKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSS-- 57 usage_00224.pdb 1 NPKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSS-- 58 usage_00225.pdb 1 NPKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSSSS 60 Rl il L V l sa S L L LV Y usage_00021.pdb - usage_00072.pdb - usage_00073.pdb - usage_00165.pdb - usage_00179.pdb - usage_00180.pdb - usage_00219.pdb - usage_00220.pdb - usage_00221.pdb - usage_00222.pdb - usage_00223.pdb - usage_00224.pdb - usage_00225.pdb 61 D 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################