################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:06 2021 # Report_file: c_0129_26.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00048.pdb # 2: usage_00117.pdb # 3: usage_00239.pdb # 4: usage_00259.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00267.pdb # # Length: 196 # Identity: 27/196 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/196 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/196 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSA-----ETLEETARTHW-HAYADKV 54 usage_00117.pdb 1 --RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHTT------AMETMKETYK-D-VEERL 50 usage_00239.pdb 1 ---RALITGATKGIGADIARAFAAAGARLVLSGRD-VSELDAARRALGEQFGT-----DV 51 usage_00259.pdb 1 --KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-----KA 53 usage_00265.pdb 1 ---KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-----KA 52 usage_00266.pdb 1 ---KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-----KA 52 usage_00267.pdb 1 --KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-----KA 53 A Tg t G G a G v usage_00048.pdb 55 LRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSE-AGVLHTTPVEQFDKVMAV 113 usage_00117.pdb 51 QFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF--ERKKLVDYEEDEWNEMIQG 108 usage_00239.pdb 52 HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH----PQPVVDTDPQLFDATIAV 107 usage_00259.pdb 54 YYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH----TAPIEEFPVDKWNAIIAL 109 usage_00265.pdb 53 YYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH----TAPIEEFPVDKWNAIIAL 108 usage_00266.pdb 53 YYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH----TAPIEEFPVDKWNAIIAL 108 usage_00267.pdb 54 YYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH----TAPIEEFPVDKWNAIIAL 109 aD a e G D LvNNAGi ia usage_00048.pdb 114 NVRGIFLGCRAVLPHMLLQG-AGVIVNIASVAS--LVAFPGRSAYTTSKGAVLQLTKSVA 170 usage_00117.pdb 109 NLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVA 167 usage_00239.pdb 108 NLRAPALLASAVGKAMVAAGEGGAIITVASAAA--LAPLPDHYAYCTSKAGLVMATKVLA 165 usage_00259.pdb 110 NLSAVFHGTAAALPIMQKQG-WGRIINIASAHG--LVASVNKSAYVAAKHGVVGLTKVTA 166 usage_00265.pdb 109 NLSAVFHGTAAALPIMQKQG-WGRIINIASAHG--LVASVNKSAYVAAKHGVVGLTKVTA 165 usage_00266.pdb 109 NLSAVFHGTAAALPIMQKQG-WGRIINIASAHG--LVASVNKSAYVAAKHGVVGLTKVTA 165 usage_00267.pdb 110 NLSAVFHGTAAALPIMQKQG-WGRIINIASAHG--LVASVNKSAYVAAKHGVVGLTKVTA 166 Nl a f a p M qg G Iin as l sAy K g v lTK A usage_00048.pdb 171 VDYAGSGIRCNAVCPG 186 usage_00117.pdb 168 YEEAEYGITANMVCPG 183 usage_00239.pdb 166 RELGPHGIRANSVCPT 181 usage_00259.pdb 167 LENAGKGITCNAICPG 182 usage_00265.pdb 166 LENAGKGITCNAICPG 181 usage_00266.pdb 166 LENAGKGITCNAICPG 181 usage_00267.pdb 167 LENAGKGITCNAICPG 182 e a GI N CPg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################