################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:55:47 2021 # Report_file: c_0146_15.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00014.pdb # 4: usage_00031.pdb # 5: usage_00040.pdb # 6: usage_00041.pdb # 7: usage_00065.pdb # 8: usage_00066.pdb # 9: usage_00067.pdb # 10: usage_00076.pdb # 11: usage_00086.pdb # 12: usage_00090.pdb # 13: usage_00107.pdb # 14: usage_00114.pdb # 15: usage_00115.pdb # 16: usage_00121.pdb # 17: usage_00122.pdb # 18: usage_00124.pdb # 19: usage_00126.pdb # 20: usage_00127.pdb # 21: usage_00128.pdb # 22: usage_00129.pdb # 23: usage_00130.pdb # 24: usage_00131.pdb # 25: usage_00135.pdb # 26: usage_00163.pdb # 27: usage_00165.pdb # 28: usage_00167.pdb # 29: usage_00175.pdb # 30: usage_00205.pdb # 31: usage_00222.pdb # 32: usage_00223.pdb # 33: usage_00228.pdb # 34: usage_00246.pdb # 35: usage_00248.pdb # 36: usage_00250.pdb # # Length: 126 # Identity: 29/126 ( 23.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/126 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/126 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -VALQQSGAELVKPGASVKLSCAASGFTIKDAYMHWVKQKPEQGLEWIGRIDSGSSNTNY 59 usage_00004.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00014.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY 58 usage_00031.pdb 1 -VQLQQSGPELVKPGASVKISCKTSGYTFTKYTMHWVKQSHGKSLEWIGDINPNNGGTNY 59 usage_00040.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGFTFTNYWMHWVKQRPGQGLEWIGEILPSNGRTNY 59 usage_00041.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGFTFTNYWMHWVKQRPGQGLEWIGEILPSNGRTNY 59 usage_00065.pdb 1 -VQLEQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGHISPGSSSTNY 59 usage_00066.pdb 1 -VQLEQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGHISPGSSSTNY 59 usage_00067.pdb 1 -VQLEQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGHISPGSSSTNY 59 usage_00076.pdb 1 -VQLQQPGSVLVRPGASVKLSCKASGYTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTNY 59 usage_00086.pdb 1 -VQLQQPGADLVRPGVSVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGMIHPSDSETRL 59 usage_00090.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGQGLEWIGAIYPGNGDTSY 59 usage_00107.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTAY 59 usage_00114.pdb 1 -VQLQQSGSELVRPGASVKLSCKASGYTFTTYWIHWVKQRPGQGLEWIGTIYPGSDNTYY 59 usage_00115.pdb 1 -VQLQQSGSELVRPGASVKLSCKASGYTFTTYWIHWVKQRPGQGLEWIGTIYPGSDNTYY 59 usage_00121.pdb 1 -VQLQQSGSEMARPGASVKLPCKASGDTFTSYWMHWVKQRHGHGPEWIGNIYPGSGGTNY 59 usage_00122.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGLIDPSDSETHY 59 usage_00124.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGNIYPDSYRTNY 59 usage_00126.pdb 1 ---LQQPGAELVKPGASVKLSC--------SSWINWVKQRPGQGLEWIGNVYP---STNY 46 usage_00127.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGNIYPGSGYTNY 58 usage_00128.pdb 1 -VQLQQPGAEVVKPGASVRLSCKASGYSFTSNWINWVKQRPGQGLEWIGNISPGGSNTNH 59 usage_00129.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHY 59 usage_00130.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHY 59 usage_00131.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHY 59 usage_00135.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGEI----SYTNY 55 usage_00163.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY 58 usage_00165.pdb 1 -VQLQQPGAELLRPGASVKLSCKASGYTFTNFWMNWVKQRPGQGLELIGMIDPSDSETHY 59 usage_00167.pdb 1 -AYLQQSGAELVRPGASVKMSCKASGYTFTSYNMHWVKQTPRQGLEWIGAIYPGNGDTSY 59 usage_00175.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLECIGMIHPSDGETRL 59 usage_00205.pdb 1 -VQLQQPGAELVQPGTSVRLSCKASGYIFTTYWIHWVKQRPGQGLEWIGEINPNNGRINY 59 usage_00222.pdb 1 -VQLQQSGAELMKPGASVKISCKATGYTFSSFWIEWVKQRPGHGLEWIGEILPGSGGTHY 59 usage_00223.pdb 1 QVQLQQSGAELMKPGASVKISCKATGYTFSSFWIEWVKQRPGHGLEWIGEILPGSGGTHY 60 usage_00228.pdb 1 -VQLQQSGTELVMPGASVKMSCKASGYTFTDYWMHWVKQRPGQGLEWIGSIDPSDSYTSH 59 usage_00246.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSHWMHWVKQRPGQGLEWIGEIDPSDSYINY 59 usage_00248.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY 58 usage_00250.pdb 1 --QLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY 58 L Q G PG SV sC WvKQ glE IG i usage_00003.pdb 60 DPTFKGKATITADDSSNTAYLQMSSLTSEDTAVYYCARVY------------AMDYWGQG 107 usage_00004.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDY------YGSS-YFDYWGQG 112 usage_00014.pdb 59 NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERG------D-G--YFAVWGAG 109 usage_00031.pdb 60 NQKFKGTATLTVHKSSTTAYMELRSLTSEDSAVYYCTSKS-------------FDYWGQG 106 usage_00040.pdb 60 NEKFKTKATLTVDKSSNTAYMQLSSLTSEDSAVYYCARSP-------------SDYWGQG 106 usage_00041.pdb 60 NEKFKTKATLTVDKSSNTAYMQLSSLTSEDSAVYYCARSP-------------SDYWGQG 106 usage_00065.pdb 60 NEKFKSKATLTVDTSSSTAYMQLSSLTSDDSAVYYCGREET------VRA--SFGNWGQG 111 usage_00066.pdb 60 NEKFKSKATLTVDTSSSTAYMQLSSLTSDDSAVYYCGREET------VRA--SFGNWGQG 111 usage_00067.pdb 60 NEKFKSKATLTVDTSSSTAYMQLSSLTSDDSAVYYCGREET------VRA--SFGNWGQG 111 usage_00076.pdb 60 NEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCVRG--------------FAYWGQG 105 usage_00086.pdb 60 SQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCARLKP------GGT--WFAYWGQG 111 usage_00090.pdb 60 NQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYCAREGL------GALLRDLYYWGQG 113 usage_00107.pdb 60 NEKFKSKATLTVDKPSSTAYMALSSLTSADSAVYYCARYDY------YGGS-YFDYWGQG 112 usage_00114.pdb 60 DEKFKNKATLTVDTSSSTAFMQLSSLTSEDSAVYFCTRGSL--YYNNY-G--WFGYWGQG 114 usage_00115.pdb 60 DEKFKNKATLTVDTSSSTAFMQLSSLTSEDSAVYFCTRGSL--YYNNY-G--WFGYWGQG 114 usage_00121.pdb 60 AEKFKNKVTLTVDRSSRTVYMHLSRLTSEDSAVYYCTRSGG------P-Y--FFDYWGQG 110 usage_00122.pdb 60 NQMFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARG--------------GTYWGQG 105 usage_00124.pdb 60 NEKFKRKATLTVDTSSSTAYMQLSSLTSDDSAVYYCVRKHY------SYD--GVVYWGQG 111 usage_00126.pdb 47 NEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAFYYCVRKD-------------FPYWGQG 93 usage_00127.pdb 59 NERFKSKATLTVDTSSSTAYMQLSSLTSDDSAVYYCARKHY------FYD--GVVYWGQG 110 usage_00128.pdb 60 NEKFKSKATLTADTSSSTAYMQLSSLTSDDSAVYYCARYDG------DYG--SFDYWGQG 111 usage_00129.pdb 60 NEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLG------W----F-PYWGQG 108 usage_00130.pdb 60 NEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLG------W----F-PYWGQG 108 usage_00131.pdb 60 NEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLG------W----F-PYWGQG 108 usage_00135.pdb 56 NQKFKGKATLTVD---STAYMQLSSLTSEDSAVYYCANLRG-----------YFDYWGQG 101 usage_00163.pdb 59 NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERG------D-G--YFAVWGAG 109 usage_00165.pdb 60 NQMFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARRDY------YGI--LFDYWGQG 111 usage_00167.pdb 60 NQKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARVVYYSNS--Y-W--YFDVWGTG 114 usage_00175.pdb 60 NQKFKDKATLTLDKSSSTAYMQLSSPTSEDSAVYYCTTH--------------FDYWGQG 105 usage_00205.pdb 60 NEKFKTKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRVGV------MIT--TFPYWGQG 111 usage_00222.pdb 60 NEKFKGKATFTADKSSNTAYMQLSSLTSEDSAVYYCARGHS------YYFY-DGDYWGQG 112 usage_00223.pdb 61 NEKFKGKATFTADKSSNTAYMQLSSLTSEDSAVYYCARGHS------YYFY-DGDYWGQG 113 usage_00228.pdb 60 NEKFKGKATLTVDESSSTAYMQLSSLTSEDSAVYFCSRSGY------GYY--AMEYWGQG 111 usage_00246.pdb 60 NQIFEGKATLTVDKSSTTAYLQLSSLTSEDSAVYYCARTAG------LLA--PMDYWGQG 111 usage_00248.pdb 59 NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERG------D-G--YFAVWGAG 109 usage_00250.pdb 59 NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERG------D-G--YFAVWGAG 109 kaT T d Ta lss TS DsAvY C WG G usage_00003.pdb 108 TSVTVS 113 usage_00004.pdb 113 TTLTVS 118 usage_00014.pdb 110 TTVTVS 115 usage_00031.pdb 107 TTLTVS 112 usage_00040.pdb 107 TTLTVS 112 usage_00041.pdb 107 TTLTVS 112 usage_00065.pdb 112 TLVTVS 117 usage_00066.pdb 112 TLVTVS 117 usage_00067.pdb 112 TLVTVS 117 usage_00076.pdb 106 TLVTVS 111 usage_00086.pdb 112 TLVTVS 117 usage_00090.pdb 114 TSVTVS 119 usage_00107.pdb 113 TTLTVS 118 usage_00114.pdb 115 TLVTVS 120 usage_00115.pdb 115 TLVTVS 120 usage_00121.pdb 111 TSLTVS 116 usage_00122.pdb 106 TTLTVS 111 usage_00124.pdb 112 TLVTVS 117 usage_00126.pdb 94 TLVTVS 99 usage_00127.pdb 111 TLVTVS 116 usage_00128.pdb 112 TTLTVS 117 usage_00129.pdb 109 TLVTV- 113 usage_00130.pdb 109 TLVTVS 114 usage_00131.pdb 109 TLVTV- 113 usage_00135.pdb 102 TTLTVS 107 usage_00163.pdb 110 TTVTVS 115 usage_00165.pdb 112 TTVTVS 117 usage_00167.pdb 115 TTVTVS 120 usage_00175.pdb 106 TTLTVS 111 usage_00205.pdb 112 TLVTVS 117 usage_00222.pdb 113 TSVTV- 117 usage_00223.pdb 114 TSVTV- 118 usage_00228.pdb 112 TSVTVS 117 usage_00246.pdb 112 TSVTVS 117 usage_00248.pdb 110 TTVTVS 115 usage_00250.pdb 110 TTVTVS 115 T TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################