################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:13 2021 # Report_file: c_0158_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00196.pdb # 2: usage_00268.pdb # 3: usage_00269.pdb # 4: usage_00270.pdb # 5: usage_00295.pdb # 6: usage_00296.pdb # 7: usage_00297.pdb # 8: usage_00333.pdb # 9: usage_00377.pdb # # Length: 148 # Identity: 53/148 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/148 ( 79.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/148 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00196.pdb 1 -GTHSLKYVYTGVSRGIDFPEFTAVGMVDDGQFMYFDSNSMKAVPKTEWIRQNEGADYWD 59 usage_00268.pdb 1 ELHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 60 usage_00269.pdb 1 ------YIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 54 usage_00270.pdb 1 ------YIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 54 usage_00295.pdb 1 -LHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 59 usage_00296.pdb 1 ELHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 60 usage_00297.pdb 1 ------YIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 54 usage_00333.pdb 1 ELHTLRYIRTAMTDPGPGQPWFVTVGYVDGELFVHYNSTARRYVPRTEWIAANTDQQYWD 60 usage_00377.pdb 1 -LHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD 59 yirtamtdpGpg PwFv VGyVDgelFmhynStarraVPrTEWIaaNtdqqYWD usage_00196.pdb 60 RQTQVLIGAHQVFKDSIQIVMERFNQSKGVHTWQNMYGCELNDDGTTQGFYQYAYDGEDF 119 usage_00268.pdb 61 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 120 usage_00269.pdb 55 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 114 usage_00270.pdb 55 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 114 usage_00295.pdb 60 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 119 usage_00296.pdb 61 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 120 usage_00297.pdb 55 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 114 usage_00333.pdb 61 GQTQIGQLNEQINRENLGIRQRRYNQTGGSHTVQWMFGCDILEDGTIRGYRQSAYDGRDF 120 usage_00377.pdb 60 RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF 119 r TQi qg eQinrenl I rRyNQtgGsHTvQwM GCdileDGTirGy Q AYDGrDF usage_00196.pdb 120 VSLDKNTLTWTAANPQAVITKHKWEALA 147 usage_00268.pdb 121 VAFDKGTMTLTAAVPEAVPTKRKWEEGG 148 usage_00269.pdb 115 VAFDKGTMTLTAAVPEAVPTKRKWEE-- 140 usage_00270.pdb 115 VAFDKGTMTLTAAVPEAVPTKRKWEE-- 140 usage_00295.pdb 120 VAFDKGTMTLTAAVPEAVPTKRKWEEG- 146 usage_00296.pdb 121 VAFDKGTMTLTAAVPEAVPTKRKWEE-- 146 usage_00297.pdb 115 VAFDKGTMTLTAAVPEAVPTKRKWEEG- 141 usage_00333.pdb 121 IALDKDMKTFTAAVPEAVPTKRKWEEE- 147 usage_00377.pdb 120 VAFDKGTMTLTAAVPEAV---------- 137 va DK t T TAAvPeAV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################