################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:03 2021 # Report_file: c_0329_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00015.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00020.pdb # 9: usage_00021.pdb # # Length: 202 # Identity: 46/202 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/202 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/202 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLWMTFGEEAAPEVVE 60 usage_00012.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00013.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00014.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00015.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00016.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00017.pdb 1 ----NRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVS 56 usage_00020.pdb 1 SREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQAR 60 usage_00021.pdb 1 --------------KMPTIVAYHYRFSRGLEVVRPRDDLGHAANFLYMMFGREPDPLASR 46 ptiVA R rG i P L a NFL M fG p usage_00001.pdb 61 AFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEE 120 usage_00012.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00013.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00014.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00015.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00016.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00017.pdb 57 AFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIE 116 usage_00020.pdb 61 LMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQE 120 usage_00021.pdb 47 GIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLE 106 IL AeH fnASTF A v ST D ySavt Ai aLKG lHGGANEavm E usage_00001.pdb 121 IGIRKDESLDEAATRSKAWMVDALAQ-KKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHY 179 usage_00012.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00013.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00014.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00015.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00016.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00017.pdb 117 IG---------DPANAREWLRAKLAR-KEKIMGFGHRVYRHGDSRVPTMKRALERVGTVR 166 usage_00020.pdb 121 IG---------TPERAREWVREKLAK-KERIMGMGHRVYKAFDPRAGVLEKLARLVAEKH 170 usage_00021.pdb 107 IG---------TPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDYVAKF 157 IG p a ew la k k MG GHRVY D R k usage_00001.pdb 180 DRP-EMLGLYNGLEAAMEEA-- 198 usage_00012.pdb 167 DGQ-RWLDIYQVLAAEMAS--- 184 usage_00013.pdb 167 DGQ-RWLDIYQVLAAEMASA-- 185 usage_00014.pdb 167 DGQ-RWLDIYQVLAAEMASATG 187 usage_00015.pdb 167 DGQ-RWLDIYQVLAAEMASATG 187 usage_00016.pdb 167 DGQ-RWLDIYQVLAAEMAS--- 184 usage_00017.pdb 167 DGQ-RWLDIYQVLAAEMASA-- 185 usage_00020.pdb 171 GHS-KEYQILKIVEEEAGKVL- 190 usage_00021.pdb 158 GDPQNLFAIASAIEQEVLSH-- 177 i e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################