################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:32 2021 # Report_file: c_1131_11.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00290.pdb # 7: usage_00291.pdb # 8: usage_00292.pdb # 9: usage_00383.pdb # 10: usage_00384.pdb # 11: usage_00427.pdb # 12: usage_00452.pdb # 13: usage_00579.pdb # 14: usage_00580.pdb # 15: usage_00599.pdb # # Length: 87 # Identity: 73/ 87 ( 83.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 87 ( 83.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 87 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 58 usage_00003.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00068.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00069.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00070.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00290.pdb 1 --VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 58 usage_00291.pdb 1 -LVSLLEVIEPEVLYAGYDS-VPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 58 usage_00292.pdb 1 -LVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 59 usage_00383.pdb 1 -LVSLLEVIEPEVLYAG---SVPDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 56 usage_00384.pdb 1 -LVSLLEVIEPEVLYAGYDSSVPDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 59 usage_00427.pdb 1 --VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQMIAAVKWAKAIPGFRNLHLD 58 usage_00452.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQMIAAVKWAKAIPGFRNLHLD 60 usage_00579.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00580.pdb 1 TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 60 usage_00599.pdb 1 -LVSLLEVIEPEVLYAG-----PDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLD 54 VSLLEVIEPEVLYAG PDS WRIMTTLNMLGGRQ IAAVKWAKAIPGFRNLHLD usage_00002.pdb 59 DQMTLLQYSWMYLMAFALGWRSYRQ-- 83 usage_00003.pdb 61 DQMTLLQYSWMYLMAFALGWRSYRQ-- 85 usage_00068.pdb 61 DQMTLLQYSWMSLMAFALGWRSYR--- 84 usage_00069.pdb 61 DQMTLLQYSWMSLMAFALGWRSYR--- 84 usage_00070.pdb 61 DQMTLLQYSWMSLMAFALGWRSYR--- 84 usage_00290.pdb 59 DQMTLLQYSWMYLMAFALGWRSYRQ-- 83 usage_00291.pdb 59 DQMTLLQYSWMYLMAFALGWRSYRQSS 85 usage_00292.pdb 60 DQMTLLQYSWMYLMAFALGWRSYRQ-- 84 usage_00383.pdb 57 DQMTLLQYSWMSLMVFALGWRSYRQA- 82 usage_00384.pdb 60 DQMTLLQYSWMFLMVFALGWRSYRQAS 86 usage_00427.pdb 59 DQMTLLQYSWMSLMAFALGWRSYRQ-- 83 usage_00452.pdb 61 DQMTLLQYSWMSLMAFALGWRSYRQSS 87 usage_00579.pdb 61 DQMTLLQYSWMSLMAFALGWRSYR--- 84 usage_00580.pdb 61 DQMTLLQYSWMSLMAFALGWRSYR--- 84 usage_00599.pdb 55 DQMTLLQYSWMSLMAFALGWRSYRQ-- 79 DQMTLLQYSWM LM FALGWRSYR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################