################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:36 2021 # Report_file: c_1172_162.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00297.pdb # 2: usage_03276.pdb # 3: usage_03277.pdb # 4: usage_03732.pdb # 5: usage_04306.pdb # 6: usage_04423.pdb # 7: usage_04424.pdb # 8: usage_05046.pdb # 9: usage_05101.pdb # 10: usage_05102.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 38 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 38 ( 60.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00297.pdb 1 -------VAAVYKGKLLIGTVFHKALYC-D-------- 22 usage_03276.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 usage_03277.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 usage_03732.pdb 1 ------------P-YNLVCQNDGNLVVYAKGGKAVWHT 25 usage_04306.pdb 1 RSSSKQG-----E-YVLILQDDGFGVIYGP-------- 24 usage_04423.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 usage_04424.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 usage_05046.pdb 1 ------------P-YNLVCQNDGNLVVYAKGGKAVWHT 25 usage_05101.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 usage_05102.pdb 1 --------------VRAVFQGDGNLVVYGAGNAVLWHS 24 q dg v y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################