################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:21:19 2021 # Report_file: c_1370_118.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00947.pdb # 2: usage_00948.pdb # 3: usage_01003.pdb # 4: usage_01004.pdb # 5: usage_01005.pdb # 6: usage_01006.pdb # 7: usage_01012.pdb # 8: usage_01013.pdb # 9: usage_01014.pdb # 10: usage_01015.pdb # 11: usage_01016.pdb # 12: usage_01017.pdb # 13: usage_01075.pdb # 14: usage_01076.pdb # 15: usage_01155.pdb # 16: usage_01680.pdb # 17: usage_01681.pdb # 18: usage_01682.pdb # 19: usage_01683.pdb # 20: usage_01684.pdb # 21: usage_01685.pdb # 22: usage_01686.pdb # # Length: 58 # Identity: 28/ 58 ( 48.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 58 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 58 ( 51.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00947.pdb 1 --------VVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 49 usage_00948.pdb 1 -------TVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 48 usage_01003.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 48 usage_01004.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 48 usage_01005.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01006.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01012.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01013.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEI 49 usage_01014.pdb 1 ---IKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLA---- 51 usage_01015.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01016.pdb 1 -------TVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 50 usage_01017.pdb 1 ADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVL----- 53 usage_01075.pdb 1 --------VVPKAFEIA--------REVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 41 usage_01076.pdb 1 -------TVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVL----- 46 usage_01155.pdb 1 -------TVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 48 usage_01680.pdb 1 ---------VPKAFEIARRN---PDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 43 usage_01681.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKL------------- 36 usage_01682.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01683.pdb 1 --------VVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 47 usage_01684.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01685.pdb 1 ---------VPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAA--- 46 usage_01686.pdb 1 -------TVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE- 50 VPKAFEIA REVRLACRDIFRSSKTLAKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################