################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:46 2021 # Report_file: c_0292_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00014.pdb # 3: usage_00017.pdb # 4: usage_00020.pdb # 5: usage_00022.pdb # 6: usage_00040.pdb # 7: usage_00042.pdb # # Length: 136 # Identity: 29/136 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/136 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/136 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 GSHMSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPSD 60 usage_00014.pdb 1 ------MQFSKMHGLGNDFVVVDGVTQNVFFT--PETIRRLANRHCGIGFDQLLIVEAPY 52 usage_00017.pdb 1 -------QFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPY 51 usage_00020.pdb 1 -------QFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPY 51 usage_00022.pdb 1 -------QFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPY 51 usage_00040.pdb 1 ----MLLEFTKMHGLGNDFMVVDLISQRAYLD--TATIQRLADRHFGVGFDQLLIVEPPD 54 usage_00042.pdb 1 --HHMLLEFTKMHGLGNDFMVVDLISQRAYLD--TATIQRLADRHFGVGFDQLLIVEPPD 56 F KMHGLGNdf vVd q i rla rh G GfDqll vepp usage_00003.pdb 61 V--APVKMRMFNNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEE 118 usage_00014.pdb 53 DPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDM- 111 usage_00017.pdb 52 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD- 110 usage_00020.pdb 52 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD- 110 usage_00022.pdb 52 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD- 110 usage_00040.pdb 55 VPEADFKYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQN- 113 usage_00042.pdb 57 VPEADFKYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQN- 115 df yRiFNaDGSEv qCGNG RCfArfv Ltnk i v T G usage_00003.pdb 119 GKVTLAKID------- 127 usage_00014.pdb 112 NQIRVN---MG----- 119 usage_00017.pdb 111 DLVRVN---------- 116 usage_00020.pdb 111 DLVRVN---------- 116 usage_00022.pdb 111 DLVRVN---MG----- 118 usage_00040.pdb 114 GWVRVN---MGYPKFL 126 usage_00042.pdb 116 GWVRVN---------- 121 vrvn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################