################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:56:04 2021 # Report_file: c_0049_1.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00011.pdb # 10: usage_00012.pdb # 11: usage_00013.pdb # 12: usage_00014.pdb # 13: usage_00015.pdb # 14: usage_00016.pdb # 15: usage_00017.pdb # 16: usage_00018.pdb # 17: usage_00019.pdb # 18: usage_00021.pdb # # Length: 182 # Identity: 39/182 ( 21.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/182 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/182 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00002.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00003.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00004.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00005.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00006.pdb 1 -LIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 59 usage_00007.pdb 1 -LIGFAGAPWTLMTFMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 59 usage_00008.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00011.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00012.pdb 1 -VLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADS 59 usage_00013.pdb 1 PLIGFADAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00014.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00015.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00016.pdb 1 -LIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKA 59 usage_00017.pdb 1 -LIGFAGAPWTLMTYMVERGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 59 usage_00018.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00019.pdb 1 PLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVA 60 usage_00021.pdb 1 PLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEA 60 liGF g PwTL ymVEgG S K y P H lL Yl Q a usage_00001.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00002.pdb 61 GAQALQLYESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00003.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00004.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00005.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00006.pdb 60 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 117 usage_00007.pdb 60 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 117 usage_00008.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00011.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00012.pdb 60 GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHP-------NLPLILYASGSGG 112 usage_00013.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00014.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMITFAKDGHF 118 usage_00015.pdb 61 GAQALQLFESHAGHLGPQLFNKLALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00016.pdb 60 GAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLL----REND-GRRVPVTLFTKGGGQ 114 usage_00017.pdb 60 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 117 usage_00018.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00019.pdb 61 GAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLR--EAGLAPVPMIIFAKDGHF 118 usage_00021.pdb 61 GAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLK----REHD-GARVPAIAFTKGGGL 115 GAQA f g L f L Y k vP i f k g usage_00001.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00002.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00003.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGNTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00004.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00005.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00006.pdb 118 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 177 usage_00007.pdb 118 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 177 usage_00008.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00011.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00012.pdb 113 LLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKK 172 usage_00013.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00014.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00015.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00016.pdb 115 WLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILA- 173 usage_00017.pdb 118 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 177 usage_00018.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 178 usage_00019.pdb 119 ALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIRQLVKQMLDD 178 usage_00021.pdb 116 WLEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVLDS 175 LE la G vgLDWTv aR vg V lQGN DP L a e I l usage_00001.pdb 179 F- 179 usage_00002.pdb 179 F- 179 usage_00003.pdb 179 F- 179 usage_00004.pdb 179 F- 179 usage_00005.pdb 179 F- 179 usage_00006.pdb 178 F- 178 usage_00007.pdb 178 F- 178 usage_00008.pdb 179 F- 179 usage_00011.pdb 179 F- 179 usage_00012.pdb 173 AG 174 usage_00013.pdb 179 F- 179 usage_00014.pdb 179 F- 179 usage_00015.pdb 179 F- 179 usage_00016.pdb -- usage_00017.pdb 178 F- 178 usage_00018.pdb 179 F- 179 usage_00019.pdb 179 F- 179 usage_00021.pdb 176 YG 177 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################