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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:28 2021
# Report_file: c_1209_34.html
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#====================================
# Aligned_structures: 8
#   1: usage_00009.pdb
#   2: usage_00436.pdb
#   3: usage_00552.pdb
#   4: usage_00869.pdb
#   5: usage_00870.pdb
#   6: usage_01320.pdb
#   7: usage_01358.pdb
#   8: usage_01359.pdb
#
# Length:         65
# Identity:        9/ 65 ( 13.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     33/ 65 ( 50.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/ 65 ( 30.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00009.pdb         1  LKLNQWNTV------------------REFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   42
usage_00436.pdb         1  -KLNQWCNVVRWEFKHPQPFLR----TREFLWQEGHSAFATMEEAAEEVLQILDLYAQVY   55
usage_00552.pdb         1  LKIHQTCTIFRHETKNTKPLIR----VREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIF   56
usage_00869.pdb         1  LKLNQWNTVVRWEF--PTPFIR----TREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   54
usage_00870.pdb         1  LKLNQWNTVVRWEF--------KQP---EFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   49
usage_01320.pdb         1  LKLNQWNTVVRWEFKQPTPFIR----TREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   56
usage_01358.pdb         1  LKLNQWNTV-----------------TREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   43
usage_01359.pdb         1  LKLNQWNTVVRWEF--------KQPTTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWY   52
                            KlnQw tv                   EflWqEgH ah   EeAv  v dildly   y

usage_00009.pdb        43  EEYLA   47
usage_00436.pdb        56  EELLA   60
usage_00552.pdb        57  SDELC   61
usage_00869.pdb        55  EEYLA   59
usage_00870.pdb        50  EEYLA   54
usage_01320.pdb        57  EEYLA   61
usage_01358.pdb        44  EEYLA   48
usage_01359.pdb        53  EEYLA   57
                           ee La


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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