################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:01 2021 # Report_file: c_1068_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00168.pdb # 2: usage_00169.pdb # 3: usage_00256.pdb # 4: usage_00257.pdb # 5: usage_00258.pdb # 6: usage_00261.pdb # 7: usage_00318.pdb # 8: usage_00437.pdb # 9: usage_00529.pdb # # Length: 92 # Identity: 5/ 92 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 92 ( 10.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 92 ( 41.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00168.pdb 1 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGDSMVPLL-SATSIGGIPIQKF-ER---- 54 usage_00169.pdb 1 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGDSMVPLL-SATSIGGIPIQKF-ER---- 54 usage_00256.pdb 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVW-SHANIGGVTIAEW-V----K 54 usage_00257.pdb 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLW-ESATIGGVPMSDW-TPLPGH 58 usage_00258.pdb 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLW-ESATIGGVPMSDW-TPLPGH 58 usage_00261.pdb 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLW-ESATIGGVPMSDW-TPLPGH 58 usage_00318.pdb 1 --LDSARFRYLMGERLGVHSCLVIGWVIGQHGDSVPSVW-SGMWDAKLHKDVV-D----- 51 usage_00437.pdb 1 CNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW-SGMNVAGVSLKTL-H----- 53 usage_00529.pdb 1 CNLDSQRLQYIITNVLKAQT--KEVWVIGEQGEDKVLTWSG----QEEV--VSHT----- 47 LDs R v GehGd usage_00168.pdb 55 --------FKELPIDEIIEDVKTKGEQ----I 74 usage_00169.pdb 55 --------FKELPIDEIIEDVKTKGEQ----I 74 usage_00256.pdb 55 AHP-EIK---EDKLVKMFEDVRD--------- 73 usage_00257.pdb 59 DPL-DAD-----KREEIHQEVKNAAYKIING- 83 usage_00258.pdb 59 DPL-DAD-----KREEIHQEVKNAAYKIIN-- 82 usage_00261.pdb 59 DPL-DAD-----KREEIHQEVKNAAYKIING- 83 usage_00318.pdb 52 SAY-EVI---KLKGYTSWAIGLV--------- 70 usage_00437.pdb 54 PDLGTDKD--KEQWKEVHKQVVESAYEVIKL- 82 usage_00529.pdb 48 ------------SQVQLSNRAMELL------- 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################