################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:31 2021 # Report_file: c_1079_24.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00299.pdb # 2: usage_00665.pdb # 3: usage_00666.pdb # 4: usage_00667.pdb # 5: usage_00668.pdb # 6: usage_00669.pdb # 7: usage_00670.pdb # 8: usage_00671.pdb # 9: usage_00672.pdb # 10: usage_00673.pdb # 11: usage_00674.pdb # 12: usage_00675.pdb # # Length: 77 # Identity: 14/ 77 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 77 ( 59.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 77 ( 40.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00299.pdb 1 DALSS-MANIAGYRAIVEAAHEFGRFF------TGQITAAGKVPPAKVMVIGAGVAGLAA 53 usage_00665.pdb 1 ---------ATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 38 usage_00666.pdb 1 ----------TGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 37 usage_00667.pdb 1 ----------TGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 37 usage_00668.pdb 1 ---------ATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 38 usage_00669.pdb 1 ----------TGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 37 usage_00670.pdb 1 ----------TGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 37 usage_00671.pdb 1 ----------TGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 37 usage_00672.pdb 1 ---------ATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 38 usage_00673.pdb 1 ---------ATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 38 usage_00674.pdb 1 -----VRTEATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 42 usage_00675.pdb 1 ---------ATGYGCVYFVSEMIK---AKGESIS----------GQKIIVSGSGNVATYA 38 tGYgcvyfvsemik s gqKiiVsGsGnvatyA usage_00299.pdb 54 IGAANSLGAIVRAFD-- 68 usage_00665.pdb 39 IEKAQELGATVIGFSDS 55 usage_00666.pdb 38 IEKAQELGATVIGFSDS 54 usage_00667.pdb 38 IEKAQELGATVIGFSDS 54 usage_00668.pdb 39 IEKAQELGATVIGFSDS 55 usage_00669.pdb 38 IEKAQELGATVIGFSDS 54 usage_00670.pdb 38 IEKAQELGATVIGFSDS 54 usage_00671.pdb 38 IEKAQELGATVIGFSDS 54 usage_00672.pdb 39 IEKAQELGATVIGFSDS 55 usage_00673.pdb 39 IEKAQELGATVIGFSDS 55 usage_00674.pdb 43 IEKAQELGATVIGFSDS 59 usage_00675.pdb 39 IEKAQELGATVIGFSDS 55 IekAqeLGAtVigFs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################