################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:13 2021 # Report_file: c_0070_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00091.pdb # 4: usage_00217.pdb # 5: usage_00260.pdb # 6: usage_00261.pdb # 7: usage_00262.pdb # # Length: 240 # Identity: 55/240 ( 22.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/240 ( 49.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/240 ( 14.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC 60 usage_00039.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC 60 usage_00091.pdb 1 KTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAA-DAVEVTEKVGKEFGVKTKAYQC 57 usage_00217.pdb 1 KVASVTGSSG--GIGWAVAEAYAQAGADVAIWYNSHP--ADEKAEHLQKTYGVHSKAYKC 56 usage_00260.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC 60 usage_00261.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC 60 usage_00262.pdb 1 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC 60 Kv VTG sg G G ar A GA VAi Y S a A E l KtyG k KAYkC usage_00038.pdb 61 QVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-----SVEAWNHVVQVDLNG 115 usage_00039.pdb 61 QVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-----SVEAWNHVVQVDLNG 115 usage_00091.pdb 58 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL-----THEDFAFVYDVNVFG 112 usage_00217.pdb 57 NISDPKSVEETISQQEKDFGTIDVFVANAG----------VTWTDNYDSWNKIISVDLNG 106 usage_00260.pdb 61 QVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-----SVEAWNHVVQVDLNG 115 usage_00261.pdb 61 QVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-----SVEAWNHVVQVDLNG 115 usage_00262.pdb 61 QVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-----SVEAWNHVVQVDLNG 115 v s ek aDfG Id fiANAG e wn v VdlnG usage_00038.pdb 116 TFHCAKAVGHHFKERGTGSLVITAS-MS-GHIANFP-----QE-QTSYNVAKAGCIHMAR 167 usage_00039.pdb 116 TFHCAKAVGHHFKERGTGSLVITAS-MS-GHIANFP-----QE-QTSYNVAKAGCIHMAR 167 usage_00091.pdb 113 VFNTCRAVAKLWLQKQQKGSIVVTSSMS-SQIINQSSLNGSLT-QVFYNSSKAACSNLVK 170 usage_00217.pdb 107 VYYCSHNIGKIFKKNGKGSLIITSS-ISGKI-----------QLQAPYNTAKAACTHLAK 154 usage_00260.pdb 116 TFHCAKAVGHHFKERGTGSLVITAS-MS-GHIANFP-----QE-QTSYNVAKAGCIHMAR 167 usage_00261.pdb 116 TFHCAKAVGHHFKERGTGSLVITAS-MS-GHIANFP-----QE-QTSYNVAKAGCIHMAR 167 usage_00262.pdb 116 TFHCAKAVGHHFKERGTGSLVITAS-MS-GHIANFP-----QE-QTSYNVAKAGCIHMAR 167 f c avg fk g gsl it S mS Q YN aKA C h a usage_00038.pdb 168 SLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 226 usage_00039.pdb 168 SLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 226 usage_00091.pdb 171 GLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL 230 usage_00217.pdb 155 SLAIEWAP-FARVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLA 213 usage_00260.pdb 168 SLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 226 usage_00261.pdb 168 SLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 226 usage_00262.pdb 168 SLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 226 sLA EW faRVN iSPGYidT df K w s iP gR gl El G y y a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################