################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:29 2021 # Report_file: c_0004_19.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00007.pdb # 2: usage_00009.pdb # 3: usage_00204.pdb # 4: usage_00205.pdb # 5: usage_00208.pdb # 6: usage_00215.pdb # 7: usage_00217.pdb # 8: usage_00321.pdb # 9: usage_00463.pdb # 10: usage_00465.pdb # # Length: 318 # Identity: 122/318 ( 38.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 224/318 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 94/318 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ---------------------TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 39 usage_00009.pdb 1 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 60 usage_00204.pdb 1 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 60 usage_00205.pdb 1 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 60 usage_00208.pdb 1 ---------------------TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 39 usage_00215.pdb 1 ---------------------TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 39 usage_00217.pdb 1 ---------------------TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 39 usage_00321.pdb 1 -KAA-PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLK 58 usage_00463.pdb 1 ------------------------------------------KTSFIQGMGPGDAITGMK 18 usage_00465.pdb 1 ---------------------TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 39 KtsFIqGmGpGdaITGmK usage_00007.pdb 40 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 99 usage_00009.pdb 61 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 120 usage_00204.pdb 61 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 120 usage_00205.pdb 61 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 120 usage_00208.pdb 40 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 99 usage_00215.pdb 40 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 99 usage_00217.pdb 40 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 99 usage_00321.pdb 59 FNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 118 usage_00463.pdb 19 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 78 usage_00465.pdb 40 FNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 99 FNqfNTNQlfvSSirGaTtLrDFsGsviqVFAktDswdyWyCcvDVSvSrqMlaTGDstG usage_00007.pdb 100 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 159 usage_00009.pdb 121 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 180 usage_00204.pdb 121 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 180 usage_00205.pdb 121 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 180 usage_00208.pdb 100 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 159 usage_00215.pdb 100 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 159 usage_00217.pdb 100 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 159 usage_00321.pdb 119 NVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY 178 usage_00463.pdb 79 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 138 usage_00465.pdb 100 RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 159 rllLLglDGhEifkeklHKaKVTHaefNPrCDWlmATsSVDaTVKlWDLRnikdKnSyia usage_00007.pdb 160 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 219 usage_00009.pdb 181 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 240 usage_00204.pdb 181 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 240 usage_00205.pdb 181 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 240 usage_00208.pdb 160 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 219 usage_00215.pdb 160 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 219 usage_00217.pdb 160 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 219 usage_00321.pdb 179 SLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 237 usage_00463.pdb 139 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 198 usage_00465.pdb 160 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 219 emPHekPVNAAyFnP DstkLLTTDQrnEIRVYSsydWskPdqiIiHPHRqFQHLTPIKA usage_00007.pdb 220 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 276 usage_00009.pdb 241 TWHPMYDLIVAGRYPDDQL---LLNDKRTI------------------------------ 267 usage_00204.pdb 241 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYD-------------------------- 271 usage_00205.pdb 241 TWHPMYDLIVAGRYPDDQL---LLNDKRTI------------------------------ 267 usage_00208.pdb 220 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 276 usage_00215.pdb 220 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 276 usage_00217.pdb 220 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 276 usage_00321.pdb 238 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFD-------------------------- 271 usage_00463.pdb 199 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 255 usage_00465.pdb 220 TWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 276 tWHPmYdLIVaGRYPDdql llndkRTI usage_00007.pdb 277 TGDVLASGMGFNILIWNR 294 usage_00009.pdb ------------------ usage_00204.pdb ------------------ usage_00205.pdb ------------------ usage_00208.pdb 277 TGDVLASGMGFNILIWNR 294 usage_00215.pdb 277 TGDVLASGMGFNILIWNR 294 usage_00217.pdb 277 TGDVLASGMGFNILIWNR 294 usage_00321.pdb ------------------ usage_00463.pdb 256 TGDVLASGMGFNILIWN- 272 usage_00465.pdb 277 TGDVLASGMGFNILIWNR 294 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################