################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:33 2021 # Report_file: c_0739_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00040.pdb # 2: usage_00099.pdb # 3: usage_00143.pdb # 4: usage_00147.pdb # 5: usage_00154.pdb # 6: usage_00171.pdb # 7: usage_00172.pdb # 8: usage_00178.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 79 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 79 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 KLITLLLRSSKS-EDLRLSIPVDFTVKDLIKRYCTEVKISFHERIRLEFEGEWLDPNDQV 59 usage_00099.pdb 1 QQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLS-GRKLSFFFDGTKLSGRELP 59 usage_00143.pdb 1 DHINLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLS-MRQIRFRFDGQPINETDTP 58 usage_00147.pdb 1 DHINLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLS-MRQIRFRFDGQPINETDTP 58 usage_00154.pdb 1 DHINLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLS-MRQIRFRFDGQPINETDTP 58 usage_00171.pdb 1 --INLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLS-MRQIRFRFDGQPINETDTP 56 usage_00172.pdb 1 DHINLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLS-MRQIRFRFDGQPINETDTP 58 usage_00178.pdb 1 ----LRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLS-GHKLSFFFDGTKLSGKELP 55 L v g pl Lm Y e glS f FdG p usage_00040.pdb 60 QSTELEDEDQVSVVL---- 74 usage_00099.pdb 60 ADLGMESGDLIEVW----- 73 usage_00143.pdb 59 AQLEMEDEDTIDVFQ---- 73 usage_00147.pdb 59 AQLEMEDEDTIDVFQQQ-- 75 usage_00154.pdb 59 AQLEMEDEDTIDVFQQQTG 77 usage_00171.pdb 57 AQLEMEDEDTIDVFQ---- 71 usage_00172.pdb 59 AQLEMEDEDTIDVF----- 72 usage_00178.pdb 56 ADLGLESGDLIEVWG---- 70 a l E D i V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################