################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:25 2021 # Report_file: c_1186_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00365.pdb # 2: usage_00544.pdb # 3: usage_00547.pdb # 4: usage_01148.pdb # 5: usage_01266.pdb # 6: usage_01631.pdb # 7: usage_01715.pdb # 8: usage_01770.pdb # # Length: 39 # Identity: 8/ 39 ( 20.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 39 ( 38.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 39 ( 5.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00365.pdb 1 SLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDT 39 usage_00544.pdb 1 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 39 usage_00547.pdb 1 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 39 usage_01148.pdb 1 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 39 usage_01266.pdb 1 --HYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 37 usage_01631.pdb 1 --HYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 37 usage_01715.pdb 1 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 39 usage_01770.pdb 1 SLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDT 39 h g WQi v t Ce GC A vDT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################