################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:28 2021 # Report_file: c_0896_6.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00081.pdb # 7: usage_00082.pdb # 8: usage_00146.pdb # 9: usage_00312.pdb # 10: usage_00313.pdb # 11: usage_00314.pdb # 12: usage_00315.pdb # # Length: 123 # Identity: 103/123 ( 83.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/123 ( 83.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/123 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTAA---NETTFLNEDLPKWSGYFEKLLKKNHT-NNN 56 usage_00037.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTAA---NETTFLNEDLPKWSGYFEKLLKKNH----- 52 usage_00038.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKANETTFLNEDLPKWSGYFEKLLKKNHTN--- 57 usage_00039.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLF---ETTFLNEDLPKWSGYFEKLLKKNH----- 52 usage_00040.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNH----- 55 usage_00081.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHT-NNN 59 usage_00082.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHT-NNN 59 usage_00146.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHT-NN- 58 usage_00312.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHT-NNN 59 usage_00313.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHT-NNN 59 usage_00314.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNH----- 55 usage_00315.pdb 1 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNH----- 55 SELNEFYADMIFCGVQDIHYKFNNT ETTFLNEDLPKWSGYFEKLLKKNH usage_00036.pdb 57 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 112 usage_00037.pdb 53 ---TNNKYYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 109 usage_00038.pdb 58 -------YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 110 usage_00039.pdb 53 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 108 usage_00040.pdb 56 -------YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 108 usage_00081.pdb 60 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 115 usage_00082.pdb 60 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 115 usage_00146.pdb 59 -NK----YYFVGNNLTYADLAVFNLYDDIETKYPS-LKNFPLLKAHNEFISNLPNIKNYI 112 usage_00312.pdb 60 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 115 usage_00313.pdb 60 NDK----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 115 usage_00314.pdb 56 --K----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 109 usage_00315.pdb 56 --K----YYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYI 109 YYFVGNNLTYADLAVFNLYDDIETKYPS LKNFPLLKAHNEFISNLPNIKNYI usage_00036.pdb 113 TNR 115 usage_00037.pdb 110 TNR 112 usage_00038.pdb 111 TNR 113 usage_00039.pdb 109 TNR 111 usage_00040.pdb 109 TNR 111 usage_00081.pdb 116 TNR 118 usage_00082.pdb 116 TNR 118 usage_00146.pdb 113 TNR 115 usage_00312.pdb 116 TN- 117 usage_00313.pdb 116 TNR 118 usage_00314.pdb 110 TNR 112 usage_00315.pdb 110 TNR 112 TN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################