################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:13 2021 # Report_file: c_0406_33.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00071.pdb # 2: usage_00072.pdb # 3: usage_00107.pdb # 4: usage_00113.pdb # 5: usage_00277.pdb # 6: usage_00281.pdb # 7: usage_00282.pdb # 8: usage_00307.pdb # 9: usage_00346.pdb # 10: usage_00458.pdb # # Length: 98 # Identity: 3/ 98 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 98 ( 4.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 98 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 --PSRIVKQDEHTRYEC-KIGGSPEIKVLWYKDETEIQES--S-KFRMSFV---ESVAVL 51 usage_00072.pdb 1 --PSRIVKQDEHTRYEC-KIGGSPEIKVLWYKDETEIQES--S-KFRMSFV---ESVAVL 51 usage_00107.pdb 1 --KQSWGLENEALIVRCPRQGKP-SYTVDWYYS--SIPTQERN-RVFASG-------QLL 47 usage_00113.pdb 1 ---GTEVGEGQSANFYC-RVIASSPPVVTWHKDDRELKQS--V-KYMKRYN---GNDYGL 50 usage_00277.pdb 1 ---SMTVRQGSQVRLQV-RVTGIPTPVVKFYRDGAEIQSS--L-DFQISQE---GDLYSL 50 usage_00281.pdb 1 --PSRIVKQDEHTRYEC-KIGGSPEIKVLWYKDETEIQES--S-KFRMSFV---ESVAVL 51 usage_00282.pdb 1 --SDISTVVGEEVQLQA-TIEGAEPISVAWFKDKGEIVRE--SDNIWISYS---ENIATL 52 usage_00307.pdb 1 PLQKVSLAPNSRYYLSC-PMES-RHATYSWRHKENVE---------QSCEPGHQSPNCIL 49 usage_00346.pdb 1 ---DTTVSSDSVAKFAV-KATGEPRPTAIWTKDGKAITQG--G-KYKLSED---KGGFFL 50 usage_00458.pdb 1 TASSQMVLRGMDLLLEC-IASGVPTPDIAWYKKGGDLPSD----KAKFEN----F-NKAL 50 w L usage_00071.pdb 52 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE---- 85 usage_00072.pdb 52 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE---- 85 usage_00107.pdb 48 KFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYK---- 81 usage_00113.pdb 51 TINRVKGDDKGEYTVRAKNSYGTKEEI----------- 77 usage_00277.pdb 51 LIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ----- 83 usage_00281.pdb 52 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK----- 84 usage_00282.pdb 53 QFSRAEPANAGKYTCQIKNEAGTQECFATLS------- 83 usage_00307.pdb 50 FIENLTAQQYGHYFCEAQEGSYFRE------------- 74 usage_00346.pdb 51 EIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA---- 84 usage_00458.pdb 51 RITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYW 88 G Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################