################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:33 2021 # Report_file: c_0086_6.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00010.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00042.pdb # 5: usage_00059.pdb # 6: usage_00072.pdb # 7: usage_00073.pdb # 8: usage_00076.pdb # # Length: 114 # Identity: 37/114 ( 32.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/114 ( 41.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/114 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGNTEKGDIPD 60 usage_00024.pdb 1 GITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAE 60 usage_00025.pdb 1 GITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAE 60 usage_00042.pdb 1 AVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHGLRLIYYSYGAGSTEKGDIPD 60 usage_00059.pdb 1 AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD 60 usage_00072.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00073.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00076.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 tQ P G TL C Q nH MYWYrQD G gLrLI YS KG usage_00010.pdb 61 GYEASRPSHEQFSLILVSATPSQSSVYFCASGV-G----GTLYFGAGTRLSVL- 108 usage_00024.pdb 61 GYSVSREKKESFPLTVTSAQKNPTAFYLCASSLRDGYT-GELFFGEGSRLTV-- 111 usage_00025.pdb 61 GYSVSREKKESFPLTVTSAQKNPTAFYLCASSLRDGYT-GELFFGEGSRLTV-- 111 usage_00042.pdb 61 GYKASRPSQENFSLTLESATPSQTSVYFCASGD-A-SGAETLYFGPGTRLTVL- 111 usage_00059.pdb 61 GYKASRPSQENFSLILELATPSQTSVYFCASGD-------AQFFGPGTRLTVLE 107 usage_00072.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSE-A-RRYNEQFFGPGTRLTVLE 112 usage_00073.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSE-A-RRYNEQFFGPGTRLTVLE 112 usage_00076.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSGLRDL--YEQYFGPGTRLTVTE 112 gy SR F L sA t Y CAS FG G RLtV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################