################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:29 2021 # Report_file: c_0082_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00091.pdb # 4: usage_00092.pdb # 5: usage_00093.pdb # 6: usage_00185.pdb # 7: usage_00255.pdb # # Length: 181 # Identity: 20/181 ( 11.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/181 ( 35.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/181 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 PPEYAALQEPLGNAVDTVLA-G-P-IAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEP 57 usage_00086.pdb 1 PPEYAALQEPLGNAVDTVLA-G-P-IAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEP 57 usage_00091.pdb 1 PPEYATLQEPLGNAVDTVLA-G-P-ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 57 usage_00092.pdb 1 PPEYATLQEPLGNAVDTVLA-G-P-ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 57 usage_00093.pdb 1 PPEYATLQEPLGNAVDTVLA-G-P-ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 57 usage_00185.pdb 1 LDVLAMAMCSGATAYHAFDE-YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 59 usage_00255.pdb 1 SYENGAMLEPLSVALAGLQRAG-V-RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 58 e a epl A g G lI GAGPlGL g Aka GA pviv usage_00085.pdb 58 SEFRRKLAKKVG--ADYVVNPFEE---DPVKFV---MDITDGAGVEVFLEFSGAPKALEQ 109 usage_00086.pdb 58 SEFRRKLAKKVG--ADYVVNPFEE---DPVKFV---MDITDGAGVEVFLEFSGAPKALEQ 109 usage_00091.pdb 58 SDFRRELAKKVG--ADYVINPFEE---DVVKEV----DITDGNGVDVFLEFSGAPKALEQ 108 usage_00092.pdb 58 SDFRRELAKKVG--ADYVINPFEE---DVVKEV----DITDGNGVDVFLEFSGAPKALEQ 108 usage_00093.pdb 58 SDFRRELAKKVG--ADYVINPFEE---DVVKEV----DITDGNGVDVFLEFSGAPKALEQ 108 usage_00185.pdb 60 SPNRLKLAEEIG--ADLTLNRRET---SVEERRKAIMDITHGRGADFILEATGDSRALLE 114 usage_00255.pdb 59 DEGRLKFAKEICPEV-VTHKVERLSAEESAKKI---VESFGGIEPAVALECTGVESSIAA 114 s R lAk g a n e k dit G g v LE G al usage_00085.pdb 110 GLKAVTPGGRVSLLGL-F-PREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQS- 166 usage_00086.pdb 110 GLKAVTPGGRVSLLGL-F-PREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQS- 166 usage_00091.pdb 109 GLQAVTPAGRVSLLGL-Y-PGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS- 165 usage_00092.pdb 109 GLQAVTPAGRVSLLGL-Y-PGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS- 165 usage_00093.pdb 109 GLQAVTPAGRVSLLGL-Y-PGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS- 165 usage_00185.pdb 115 GSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD-TSHFVKTVSITSRN 173 usage_00255.pdb 115 AIWAVKFGGKVFVIGV-G-KNEIQIPFMRASV-REVDLQFQYRYC--NTWPRAIRLVENG 169 g av G vs G v i f k gi tw l usage_00085.pdb - usage_00086.pdb - usage_00091.pdb - usage_00092.pdb - usage_00093.pdb - usage_00185.pdb 174 Y 174 usage_00255.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################