################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:29 2021 # Report_file: c_1224_125.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00115.pdb # 2: usage_00172.pdb # 3: usage_00184.pdb # 4: usage_00185.pdb # 5: usage_00370.pdb # 6: usage_00608.pdb # 7: usage_00609.pdb # 8: usage_00612.pdb # 9: usage_00613.pdb # 10: usage_00670.pdb # 11: usage_00671.pdb # 12: usage_00890.pdb # # Length: 23 # Identity: 4/ 23 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 23 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 23 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 RPKLLHCGHTICRQCLEKLLASS 23 usage_00172.pdb 1 -IVSTECGHVFCSQCLRDSLKN- 21 usage_00184.pdb 1 EPVSADCNHSFCRACITLNYESN 23 usage_00185.pdb 1 -PKQTECGHRFCESCMAALLSS- 21 usage_00370.pdb 1 EPVSTKCDHIFCKFCMLKLLNQ- 22 usage_00608.pdb 1 QPLDTPCGHTFCYKCLRNFLQEK 23 usage_00609.pdb 1 QPLDTPCGHTFCYKCLRNFLQEK 23 usage_00612.pdb 1 QPVRTRCGHVFCRSCIATSLKNN 23 usage_00613.pdb 1 QPVRTRCGHVFCRSCIATSLKNN 23 usage_00670.pdb 1 HPVSLPCKHVFCYLCVKGASWLG 23 usage_00671.pdb 1 HPVSLPCKHVFCYLCVKGASWLG 23 usage_00890.pdb 1 DAVLTKCFHVFCFECVKTRYDTR 23 C H fC C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################