################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:08 2021 # Report_file: c_1484_184.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00650.pdb # 2: usage_00884.pdb # 3: usage_01783.pdb # 4: usage_01784.pdb # 5: usage_02714.pdb # 6: usage_03191.pdb # 7: usage_04631.pdb # 8: usage_04632.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 44 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 44 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00650.pdb 1 SKAVLVKMLRKLYEATK-----------DEEVKRMLHLIEG--- 30 usage_00884.pdb 1 LFRVRARGLLEHLRRFAEG------WEIYENLNIVFDIVLG--- 35 usage_01783.pdb 1 -----MEEIIKKAFIESINNIRRGD----KEEELKKIQEKIVN- 34 usage_01784.pdb 1 -----MEEIIKKAFIESINNIRRGD----KEEELKKIQEKIV-- 33 usage_02714.pdb 1 -----IENTIKSAYEESLNNARFGD----KIEEIDAIQSTIK-- 33 usage_03191.pdb 1 -----LEDLIGKAYLESAEDRRRGD----RSEEVEAIRKYIRS- 34 usage_04631.pdb 1 ----VMEEIIKKAFIESINNIRRGD----KEEELKKIQEKIVNA 36 usage_04632.pdb 1 ----VMEEIIKKAFIESINNIRRGD----KEEELKKIQEKIVNA 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################