################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:16 2021 # Report_file: c_1434_147.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00705.pdb # 2: usage_01582.pdb # 3: usage_02542.pdb # # Length: 171 # Identity: 9/171 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/171 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/171 ( 51.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00705.pdb 1 DENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLE 60 usage_01582.pdb 1 ---EHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLE 57 usage_02542.pdb 1 --------------------------------------------------DKKAVIQHFQ 10 hfqekvesle usage_00705.pdb 61 QEAANERQQLVETHMARVEAMLNDRRRLALENYITALQA-------VPP-------RPR- 105 usage_01582.pdb 58 QEAANERQQLVETHMARVEAMLNDRRRLALENYITALQA-------VPP-------RPR- 102 usage_02542.pdb 11 EKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKK 70 qeaanerQqlvethmarVEamlndrrrlalenyitALqa VPP rpr usage_00705.pdb 106 ----------------------HVFNMLKKYVRAEQKDRQHTLKHFEHVRM 134 usage_01582.pdb 103 ----------------------HVFNMLKKYVRAEQKDRQHTLKHFEHVRM 131 usage_02542.pdb 71 YVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLS- 120 hvfnmlkkyvraeqkdRqhtlkhfehvr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################