################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:03 2021 # Report_file: c_1059_9.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00002.pdb # 2: usage_00041.pdb # 3: usage_00076.pdb # 4: usage_00077.pdb # 5: usage_00093.pdb # 6: usage_00104.pdb # 7: usage_00105.pdb # 8: usage_00157.pdb # 9: usage_00158.pdb # 10: usage_00177.pdb # 11: usage_00179.pdb # 12: usage_00185.pdb # 13: usage_00186.pdb # 14: usage_00187.pdb # 15: usage_00188.pdb # 16: usage_00195.pdb # 17: usage_00203.pdb # 18: usage_00204.pdb # 19: usage_00207.pdb # 20: usage_00220.pdb # 21: usage_00229.pdb # 22: usage_00234.pdb # # Length: 29 # Identity: 6/ 29 ( 20.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 29 ( 27.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 29 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 KAEDVGVYYCQQFVEYPFTFG-SGTKL-- 26 usage_00041.pdb 1 QAEDVAVYYCLQYYSTPYSFG-QGTKLEI 28 usage_00076.pdb 1 -TEDLAVYYCHQYLSSYMYTFGGGTKLEI 28 usage_00077.pdb 1 -TEDLAVYYCHQYLSSYMYTFGGGTKLEI 28 usage_00093.pdb 1 -AEDLAVYYCQQYYHYRTFG--GGTRLEI 26 usage_00104.pdb 1 -AEDLAVYYCQNDHSYPLTFG-AGTKLEL 27 usage_00105.pdb 1 QAEDLADYHCGQGYSYPYTFG-GGTKLEL 28 usage_00157.pdb 1 QAEDVAVYYCQQYYSTPYSFG-QGTKLEI 28 usage_00158.pdb 1 QAEDVAVYYCQQYYNPPWTFG-QGTKVEV 28 usage_00177.pdb 1 QAEDLAVYYCKQSYNLRTFG--GGTKLEL 27 usage_00179.pdb 1 QAEDVAVYYCQQYYSAPLTFG-GGTKVEI 28 usage_00185.pdb 1 KAEDLAVYYCQQYYSYPLTFG-AGTKLEL 28 usage_00186.pdb 1 KAEDLAVYYCQQYYSYPLTFG-AGTKLEL 28 usage_00187.pdb 1 KAEDLAVYYCQQYYSYPLTFG-AGTKLEL 28 usage_00188.pdb 1 KAEDLAVYYCQQYYSYPLTFG-AGTKLEL 28 usage_00195.pdb 1 QSEDLADYFCQQYNSYPTFG--GGTKLEI 27 usage_00203.pdb 1 QSEDLADYFCQQYSSYPLTFG-AGTKLEL 28 usage_00204.pdb 1 QSEDLADYFCQQYSSYPLTFG-AGTKLEL 28 usage_00207.pdb 1 EPEDFAVYYCQQRSMWPPVTFGQGTKLEI 29 usage_00220.pdb 1 QAEDLAVYYCKQSYYHMYTFG-SGTKLEI 28 usage_00229.pdb 1 QAEDVAVYYCQQYDNYPITFG-QGTRLEI 28 usage_00234.pdb 1 QAEDLAVYYCKQSYYHMYTFG-SGTKLEI 28 ED a Y C q GT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################