################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:26 2021 # Report_file: c_1459_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00838.pdb # 2: usage_01244.pdb # 3: usage_01423.pdb # 4: usage_01424.pdb # 5: usage_01960.pdb # 6: usage_02439.pdb # 7: usage_02502.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 64 ( 14.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 64 ( 67.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00838.pdb 1 V---LIDNSPASYVFHPDNAVPVASW--------FDN--S-------DTELHDLLPFFEQ 40 usage_01244.pdb 1 --LILLTG---------------------------DLLHSRNNPS--VVALHDLLDYLKR 29 usage_01423.pdb 1 -RVLILDNSPASYVFHPDNAVPVASW--------FDNM-S-------DTELHDLLPFFEQ 43 usage_01424.pdb 1 --VLILDNSPASYVFHPDNAVPVASW--------FDNM-S-------DTELHDLLPFFEQ 42 usage_01960.pdb 1 ----VLEASE--------G-TLERVPGTLYDPHTWLDP-E-----KAGEEAQIIADKLSE 41 usage_02439.pdb 1 --VLILDNSPASYVFHPDNAVPVASW--------FDNM-S-------DTELHDLLPFFEQ 42 usage_02502.pdb 1 --VLILDNSPASYVFHPDNAVPVASW--------FDNM-S-------DTELHDLLPFFEQ 42 l d s elhdll usage_00838.pdb 41 LSRV 44 usage_01244.pdb 30 MMRT 33 usage_01423.pdb 44 LSRV 47 usage_01424.pdb 43 LSRV 46 usage_01960.pdb 42 V--- 42 usage_02439.pdb 43 LS-- 44 usage_02502.pdb 43 LSRV 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################