################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:08 2021 # Report_file: c_1180_139.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00146.pdb # 2: usage_00147.pdb # 3: usage_00321.pdb # 4: usage_00322.pdb # 5: usage_00635.pdb # 6: usage_00638.pdb # 7: usage_01603.pdb # 8: usage_01613.pdb # 9: usage_01870.pdb # 10: usage_01871.pdb # 11: usage_01873.pdb # # Length: 46 # Identity: 10/ 46 ( 21.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 46 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 46 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 --YRMLAKHGGYVWLETQGTVIY------P-----QCIMCVNYVLS 33 usage_00147.pdb 1 --YRMLAKHGGYVWLETQGTVIYN-----P-----QCIMCVNYVLS 34 usage_00321.pdb 1 -QYRMLAKHGGYVWLETQGTVIYNPRNLQP-----QCIMCVNYVLS 40 usage_00322.pdb 1 -QYRMLAKHGGYVWLETQGTVIYNPRNLQP-----QCIMCVNYVLS 40 usage_00635.pdb 1 GQYRMLAKHGGYVWLETQGTVIYNPRNLQP-----QCIMCVNYVLS 41 usage_00638.pdb 1 GQYRMLAKHGGYVWLETQGTVIYNPRNLQP-----QCIMCVNYVLS 41 usage_01603.pdb 1 --YRMLAKHGGYVWLETQGTVIY------P-----QCIMCVNYVLS 33 usage_01613.pdb 1 --YRFLARSGGYLWTQTQATVVS------GRGPQSESIVCVHFLIS 38 usage_01870.pdb 1 --YRWLQRAGGFVWLQSVATVA-------------HHVLWVSHVLS 31 usage_01871.pdb 1 --YRWLQRAGGFVWLQSVATVA-------------HHVLWVSHVLS 31 usage_01873.pdb 1 -QYRMLAKHGGYVWLETQGTVIYNP----P-----QCIMCVNYVLS 36 YR L GG vWl TV V vlS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################