################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:40 2021 # Report_file: c_0699_142.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00393.pdb # 2: usage_00394.pdb # 3: usage_00514.pdb # 4: usage_01064.pdb # 5: usage_01065.pdb # 6: usage_01104.pdb # 7: usage_01136.pdb # 8: usage_01137.pdb # 9: usage_01500.pdb # # Length: 85 # Identity: 15/ 85 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 85 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 85 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00393.pdb 1 TNWEPSCEKIIPINSQKILKGDVSMYLLLKDGGRYRCQFDTIYKAKTEPKEMPDWHFIQH 60 usage_00394.pdb 1 TNWEPSCEKIIPINSQKILKGDVSMYLLLKDGGRYRCQFDTIYKAKTEPKEMPDWHFIQH 60 usage_00514.pdb 1 LKWEPSTEKMYVR--DGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPGYHLVDH 58 usage_01064.pdb 1 TGWDPSFEKMTVC--DGILKGDVTAFLMLQGGGNYRCQFHTSYKTKKPV-TMPPNHVVEH 57 usage_01065.pdb 1 TGWDPSFQKMTVC--DGILKGDVTAFLMLQGGGNYRCQFHTSYKTKKPV-TMPPNHVVEH 57 usage_01104.pdb 1 VDWEPSTEKITAS--DGVLKGDVTMYLKLEGGGNHKCQFKTTYKAAKKILKMPGSHYISH 58 usage_01136.pdb 1 LKWEPSTEKLHVR--DGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVV-QLPDYHFVDH 57 usage_01137.pdb 1 LKWEPSTEKLHVR--DGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVV-QLPDYHFVDH 57 usage_01500.pdb 1 QGWEPSSERLFAR--GGMLIGNNFMALKLEGGGHYLCEFKTTYKAKKPV-KMPGYHYVDR 57 W PS ek L G L L gg y C f T YK k P H h usage_00393.pdb 61 KLNREDRSDAKNQKWQLIEHAIAS- 84 usage_00394.pdb 61 KLNREDRSDAKNQKWQLIEHAIA-- 83 usage_00514.pdb 59 CIEILSHD-KDYNKVKLYEHAVAH- 81 usage_01064.pdb 58 RIARTDLD-KGGNSVQLTEHAVAHI 81 usage_01065.pdb 58 RIARTDLD-KGGNSVQLTEHAVAHI 81 usage_01104.pdb 59 RLVRKT-E---GNITELVEDAVA-- 77 usage_01136.pdb 58 RIEILSND-SDYNKVKLYEHGVA-- 79 usage_01137.pdb 58 RIEILSND-SDYNKVKLYEHGVA-- 79 usage_01500.pdb 58 KLDVTNHN-KDYTSVEQCEISIA-- 79 l E A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################