################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:18 2021 # Report_file: c_0385_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00160.pdb # 2: usage_00249.pdb # 3: usage_00250.pdb # 4: usage_00396.pdb # 5: usage_00427.pdb # 6: usage_00428.pdb # 7: usage_00505.pdb # # Length: 89 # Identity: 6/ 89 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 89 ( 66.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 89 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00160.pdb 1 EVVQVDEG-NDITMTCPCTDCANA-----NVTWYTGPTFFENYETGT-YQPLANKNQFG- 52 usage_00249.pdb 1 --VEFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 46 usage_00250.pdb 1 --VEFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 46 usage_00396.pdb 1 --VEFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 46 usage_00427.pdb 1 KSVDFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 48 usage_00428.pdb 1 KSVDFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 48 usage_00505.pdb 1 --VEFTFGNDTVVIPCFVTNMEA-QNTTEVYVKWKF-----------KGRDIYTFDGALN 46 V ftfG dtvvipCfvTnmea vyvkwkf grdiytfdgal usage_00160.pdb 53 ITWFSSEIAGRASFSG------ARNLVIR 75 usage_00249.pdb 47 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 74 usage_00250.pdb 47 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 74 usage_00396.pdb 47 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 74 usage_00427.pdb 49 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 76 usage_00428.pdb 49 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 76 usage_00505.pdb 47 KSTVPTDFSS-AKIEVSQLLKGDASLKMD 74 kstvptdfss Akiev dasLkmd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################