################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:22 2021 # Report_file: c_0636_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00028.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00044.pdb # 6: usage_00171.pdb # # Length: 94 # Identity: 74/ 94 ( 78.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/ 94 ( 81.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 94 ( 18.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 60 usage_00041.pdb 1 VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 60 usage_00042.pdb 1 ----------------YAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 44 usage_00043.pdb 1 VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 60 usage_00044.pdb 1 -------------KEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 47 usage_00171.pdb 1 VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEVLT-NKKTTFFGGNSISMIDYLIWPWFE 59 YAGLKEEFRKEFTKLEevl NKKTTFFGGNSISMIDYLIWPWFE usage_00028.pdb 61 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 94 usage_00041.pdb 61 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 94 usage_00042.pdb 45 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 78 usage_00043.pdb 61 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 94 usage_00044.pdb 48 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 81 usage_00171.pdb 60 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 93 RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################