################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:03 2021 # Report_file: c_0162_28.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00189.pdb # 2: usage_00222.pdb # 3: usage_00285.pdb # 4: usage_00319.pdb # 5: usage_00353.pdb # 6: usage_00538.pdb # # Length: 140 # Identity: 28/140 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/140 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/140 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00189.pdb 1 -AVYFARDVRNSEVVAIKKMSYSG-KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 58 usage_00222.pdb 1 GKVYKAQNKETSVLAAAKVIDTK-SE--E-ELEDYMVEIDILASCDHPNIVKLLDAFYYE 56 usage_00285.pdb 1 ----KGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD 53 usage_00319.pdb 1 GEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD 57 usage_00353.pdb 1 -SVYKAIHKETGQIVAIKQVPVE----S--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN 53 usage_00538.pdb 1 GEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD 57 k t vAiK di Ei l cd P ky g y usage_00189.pdb 59 HTAWLVMEYCLGSA-SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 117 usage_00222.pdb 57 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 116 usage_00285.pdb 54 TKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 111 usage_00319.pdb 58 TKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 115 usage_00353.pdb 54 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNI 113 usage_00538.pdb 58 TKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 115 lWi mEy gg d pL E Ia L gL YLH IHRD KA N usage_00189.pdb 118 LLSEPGLVKLGDFGSASIM- 136 usage_00222.pdb 117 LFTLDGDIKLADFGVSAKNT 136 usage_00285.pdb 112 LLSEHGEVKLADFGVAGQLT 131 usage_00319.pdb 116 LLSEHGEVKLADFGVAGQLT 135 usage_00353.pdb 114 LLNTEGHAKLADFGVAGQLT 133 usage_00538.pdb 116 LLSEHGEVKLADFGVAGQLT 135 Ll G KLaDFGva #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################