################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:03 2021 # Report_file: c_0850_49.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00120.pdb # 2: usage_00218.pdb # 3: usage_00273.pdb # 4: usage_00558.pdb # 5: usage_00603.pdb # # Length: 78 # Identity: 21/ 78 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 78 ( 26.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 78 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 NSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRN-EYT---KLAERQQKLGRHMATLN 56 usage_00218.pdb 1 NSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRN-EYTGRGKLAERQQKLGRHMATLN 59 usage_00273.pdb 1 NADHQLRLLDAAAQMMSE-SRFSLIVVDSVMALYRTD------ELSARQMHLAKFMRALQ 53 usage_00558.pdb 1 NADHQLRLLDAAAQMMSE-SRFSLIVVDSVMALYR-------GELSARQMHLAKFMRALQ 52 usage_00603.pdb 1 -SDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRN-EYTGRGKLAERQQKLGRHMATLN 58 D Q E L V DS R L RQ L M L usage_00120.pdb 57 KLADLFNCVVLVTNQ--- 71 usage_00218.pdb 60 KLADLFNCVVLVTNQVSA 77 usage_00273.pdb 54 RLADQFGVAVVVTNQV-- 69 usage_00558.pdb 53 RLADQFGVAVVVT----- 65 usage_00603.pdb 59 KLADLFNCVVLVTNQVSA 76 LAD F V VT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################