################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:28 2021 # Report_file: c_0398_139.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00011.pdb # 2: usage_00013.pdb # 3: usage_00022.pdb # 4: usage_00522.pdb # 5: usage_00583.pdb # 6: usage_00584.pdb # 7: usage_00825.pdb # # Length: 104 # Identity: 48/104 ( 46.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/104 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/104 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ------------------------KVKLTISDDLGQTTLEVFKSDGSTLV--SKKVTSNG 34 usage_00013.pdb 1 ------------------------KVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSKDKS 36 usage_00022.pdb 1 ------------------------KVKLTISDDLGQTTLEVFKSDGSTLV--YKYVYSKD 34 usage_00522.pdb 1 ------------------------KVKLTISDDLGQTTLEVFKSDGSTLV--YKYVYSKD 34 usage_00583.pdb 1 LELSGTSDKNNGSGVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLV--SKKVTRA- 57 usage_00584.pdb 1 -------------GVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLV--SKKVTSNG 45 usage_00825.pdb 1 ------------------------KVKLTISDDLGQTTLEVFKSDGSTLV--SKKVTSKD 34 KVKLTISDDLGQTTLEVFKSDGSTLV k v usage_00011.pdb 35 -SSTEEKFNEKGEVSEKIITRADGTRLEYTGIKSDGSGKAKEVL 77 usage_00013.pdb 37 -STEEKIII-DGIIIEKIITRADGTRLEYTGIKSDGSGKAKEVL 78 usage_00022.pdb 35 KSYTYEYFNEKGEVSYKYIYRADGTRLEYTGIKSDGSGKAKEVL 78 usage_00522.pdb 35 KSYTWEYFNEKGEVSYKYIYRADGTRLEYTGIKSDGSGKAKEVL 78 usage_00583.pdb 58 ----------------------DGTRLEYTGIKSDGSGKAKEVL 79 usage_00584.pdb 46 -SSTEE--------------RADGTRLEYTGIKSDGSGKAKEVL 74 usage_00825.pdb 35 KSSTEEKANEKGEVSEKIITRADGTRLEYTGIKSDGSGKAKEVL 78 DGTRLEYTGIKSDGSGKAKEVL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################