################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:29:03 2021 # Report_file: c_0690_29.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00023.pdb # 2: usage_00060.pdb # 3: usage_00084.pdb # 4: usage_00125.pdb # 5: usage_00126.pdb # 6: usage_00216.pdb # 7: usage_00217.pdb # 8: usage_00226.pdb # 9: usage_00258.pdb # 10: usage_00279.pdb # 11: usage_00323.pdb # 12: usage_00330.pdb # 13: usage_00331.pdb # 14: usage_00341.pdb # 15: usage_00353.pdb # 16: usage_00358.pdb # 17: usage_00391.pdb # 18: usage_00410.pdb # 19: usage_00423.pdb # 20: usage_00447.pdb # # Length: 83 # Identity: 5/ 83 ( 6.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 83 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 83 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00060.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00084.pdb 1 APFTIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDA---SPDWQ-V--QGS------ 48 usage_00125.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00126.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00216.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00217.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00226.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00258.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00279.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00323.pdb 1 -----PIIRAEV--DDVIEIQFKNLAS---RPYSLHAHGLLYEKSSEGRSYD--DKSPEL 48 usage_00330.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00331.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00341.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00353.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00358.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00391.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00410.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00423.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 usage_00447.pdb 1 -----PAVKLQR--GKAVTVDIYNQLT---EETTLHWHGLEVPGEVDGGP-Q-------- 41 P v l v v Nq Lh hg q usage_00023.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00060.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00084.pdb 49 ---VEPLMPGRQAKGQVTITVP- 67 usage_00125.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00126.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00216.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00217.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00226.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00258.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00279.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00323.pdb 49 FKKDDAIMP--NGTYTYVWQVP- 68 usage_00330.pdb 42 ----GIIPP--GGKRSVTLNVDQ 58 usage_00331.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00341.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00353.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00358.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00391.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00410.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00423.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 usage_00447.pdb 42 ----GIIPP--GGKRSVTLNVD- 57 i P gk vt V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################