################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:01 2021 # Report_file: c_0043_9.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00104.pdb # 2: usage_00207.pdb # 3: usage_00208.pdb # # Length: 234 # Identity: 80/234 ( 34.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 191/234 ( 81.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/234 ( 18.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 MASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLR 60 usage_00207.pdb 1 MASVRFGGQHHCGGFLLRARWVVSAAHCFSHRDLRTGLVVLGAHVLSTAEPTQQVFGIDA 60 usage_00208.pdb 1 MASVRFGGQHHCGGFLLRARWVVSAAHCFSHRDLRTGLVVLGAHVLSTAEPTQQVFGIDA 60 MASVrfgGqHhCGGfLlrarWVvSAAHCfshrdlrtglVvLGAHvLStaEPtqqvfgida usage_00104.pdb 61 AVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQR--VDRDVAPGTLCDVAGWGI-- 116 usage_00207.pdb 61 LTTHPDYHPMTHANDICLLRLNGSAVLGPAVGLLRLPGRRA-RPPTAGTRCRVAGWGFVS 119 usage_00208.pdb 61 LTTHPDYHPMTHANDICLLRLNGSAVLGPAVGLLRLPGRRA-RPPTAGTRCRVAGWGFVS 119 lttHPDyhPmThanDicLLrLngsAvLGPAVglLrlpg a RpptaGTrCrVAGWGf usage_00104.pdb 117 -----PDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE-SNRRDS------CKGDSGG 164 usage_00207.pdb 120 DFEELPPGLMEAKVRVLDPDVCNSSWKGH--LTLTMLCTRSGD----SHRRGFCSADSGG 173 usage_00208.pdb 120 DFEELPPGLMEAKVRVLDPDVCNSSWKGH--LTLTMLCTRSGD----SHRRGFCSADSGG 173 PpgLmeakvrVLDpdvCNsswkgh lTltmlCtr gd CsaDSGG usage_00104.pdb 165 PLVCGGVLEGVVTSGSRVCGNR--------KKPGIYTRVASYAAWIDSVL---- 206 usage_00207.pdb 174 PLVCRNRAHGLVSF--------SGLWCGDPKTPDVYTQVSAFVAWIWDVVRRSS 219 usage_00208.pdb 174 PLVCRNRAHGLVSF--------SGLWCGDPKTPDVYTQVSAFVAWIWDVVRRSS 219 PLVCrnrahGlVsf KtPdvYTqVsafvAWIwdVv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################