################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:13 2021 # Report_file: c_0509_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00113.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00116.pdb # 5: usage_00117.pdb # 6: usage_00118.pdb # 7: usage_00119.pdb # 8: usage_00120.pdb # 9: usage_00121.pdb # 10: usage_00122.pdb # # Length: 107 # Identity: 92/107 ( 86.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/107 ( 87.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/107 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00114.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00115.pdb 1 -KDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 59 usage_00116.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00117.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00118.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00119.pdb 1 -KDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 59 usage_00120.pdb 1 TKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 60 usage_00121.pdb 1 -KDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 59 usage_00122.pdb 1 -KDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL 59 KDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVL usage_00113.pdb 61 SF----------GESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 95 usage_00114.pdb 61 SF---------KGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHC 98 usage_00115.pdb 60 SFSE------QKGESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 98 usage_00116.pdb 61 SFSE--------GESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 97 usage_00117.pdb 61 SK----------GESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 95 usage_00118.pdb 61 SFSEATSSVQ-KGESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 104 usage_00119.pdb 60 SFSEATSSVQ-KGESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 103 usage_00120.pdb 61 SFSEATSS----VESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 101 usage_00121.pdb 60 SFSEATSSVQ-KGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHC 105 usage_00122.pdb 60 SFSEATSSVQ-KGESLADSVQTMSCYADVVVLRHPQPGAVELAAK-- 103 Sf gESLADSVQTMSCYADVVVLRHPQPGAVELAAK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################