################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:25 2021 # Report_file: c_0717_6.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00036.pdb # 2: usage_00043.pdb # 3: usage_00227.pdb # 4: usage_00273.pdb # 5: usage_00360.pdb # 6: usage_00361.pdb # 7: usage_00362.pdb # 8: usage_00363.pdb # 9: usage_00364.pdb # 10: usage_00372.pdb # 11: usage_00373.pdb # 12: usage_00393.pdb # 13: usage_00413.pdb # 14: usage_00438.pdb # 15: usage_00440.pdb # # Length: 94 # Identity: 2/ 94 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 94 ( 10.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 94 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00043.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00227.pdb 1 -Y-VMAIDQGTTSSRAIIFDR------N---GKKIGSSQKEFPQYFPKSGWV--EHNANE 47 usage_00273.pdb 1 --RIVTLDAGGTNFVFSAIQG-------GKE-I-ADPVVLPA-----------CADCLDK 38 usage_00360.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00361.pdb 1 GD-FIALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 48 usage_00362.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00363.pdb 1 GD-FIALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 48 usage_00364.pdb 1 GD-FIALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 48 usage_00372.pdb 1 GD-FIALDLGGSSFRILRVQV------N---VS-MESEIYDTPEN-------IVHGSGTQ 42 usage_00373.pdb 1 GD-FIALDLGGSSFRILRVQV------N---VS-MESEIYDTPEN-------IVHGSGTQ 42 usage_00393.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00413.pdb 1 ----LALDLGGTNFRVLWVKV----------VE-MENQIYAIPED-------IMRGSGTQ 38 usage_00438.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 usage_00440.pdb 1 ----IALDLGGSSFRILRVQVNHEKNQN---VH-MESEVYDTPEN-------IVHGSGSQ 45 alD Gg fr usage_00036.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 75 usage_00043.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 75 usage_00227.pdb 48 IWNSVQSVIAGAFIESGIRPEAI---AGIGITN- 77 usage_00273.pdb 39 CLGNLVEGFKAIQAGLPE------APVAISFA-- 64 usage_00360.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 75 usage_00361.pdb 49 LFDHVAECLGDFMEKRKI----KDKKLPVGFTF- 77 usage_00362.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTF- 74 usage_00363.pdb 49 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 78 usage_00364.pdb 49 LFDHVAECLGDFMEKRKI----KDKKLPVGFTF- 77 usage_00372.pdb 43 LFDHVADCLGDFMEKKKI----KDKKLPVGFTF- 71 usage_00373.pdb 43 LFDHVADCLGDFMEKKDK----K---LPVGFTF- 68 usage_00393.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTF- 74 usage_00413.pdb 39 LFDHIAECLANFMDKLQI----KDKKLPLGFTFS 68 usage_00438.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 75 usage_00440.pdb 46 LFDHVAECLGDFMEKRKI----KDKKLPVGFTFS 75 gft #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################