################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:50 2021 # Report_file: c_0941_238.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00294.pdb # 2: usage_00295.pdb # 3: usage_00296.pdb # 4: usage_00297.pdb # 5: usage_00394.pdb # 6: usage_00395.pdb # 7: usage_00396.pdb # 8: usage_00397.pdb # 9: usage_00420.pdb # 10: usage_00421.pdb # 11: usage_00479.pdb # 12: usage_00480.pdb # 13: usage_00496.pdb # 14: usage_00497.pdb # 15: usage_01961.pdb # 16: usage_02108.pdb # 17: usage_02109.pdb # # Length: 54 # Identity: 37/ 54 ( 68.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 54 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 54 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00294.pdb 1 ----SAFKQASD--I-A--KVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 45 usage_00295.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00296.pdb 1 GEYFSAFKQAS-RRE---AKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 50 usage_00297.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00394.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00395.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00396.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00397.pdb 1 GEYFSAFKQAS-RREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISAL 53 usage_00420.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISA- 52 usage_00421.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 usage_00479.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISA- 52 usage_00480.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 usage_00496.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 usage_00497.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 usage_01961.pdb 1 GEFFSAFKQAS-RREDDIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISA- 52 usage_02108.pdb 1 GEFFSAFKQAS-RREADIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 usage_02109.pdb 1 GEFFSAFKQAS-RREADIAKVTSGMRVLFKPGTIEVQELSLCFGGMADRTISAL 53 SAFKQAS e KVTSGMRVLFKPGT EVQEL LC GGMA RTISA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################