################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:44:40 2021 # Report_file: c_0739_4.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00041.pdb # 8: usage_00042.pdb # 9: usage_00048.pdb # 10: usage_00050.pdb # 11: usage_00052.pdb # 12: usage_00053.pdb # 13: usage_00056.pdb # 14: usage_00069.pdb # 15: usage_00078.pdb # 16: usage_00079.pdb # 17: usage_00082.pdb # 18: usage_00086.pdb # 19: usage_00189.pdb # 20: usage_00190.pdb # 21: usage_00191.pdb # 22: usage_00236.pdb # 23: usage_00237.pdb # 24: usage_00238.pdb # 25: usage_00239.pdb # 26: usage_00240.pdb # 27: usage_00241.pdb # 28: usage_00250.pdb # # Length: 88 # Identity: 31/ 88 ( 35.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 88 ( 35.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 88 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -PKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLK 59 usage_00006.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLK 58 usage_00036.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00037.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00038.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00039.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00041.pdb 1 -----SVRVT-TDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLK 54 usage_00042.pdb 1 -----SVRVT-TDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLK 54 usage_00048.pdb 1 --KTISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKAFSTWLK 58 usage_00050.pdb 1 ------VRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTI-KDTVAWLK 53 usage_00052.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 54 usage_00053.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 54 usage_00056.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 54 usage_00069.pdb 1 --KTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIK-DTVAWLK 57 usage_00078.pdb 1 --KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIK 58 usage_00079.pdb 1 --KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIK 58 usage_00082.pdb 1 -PKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 59 usage_00086.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 54 usage_00189.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLK 58 usage_00190.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLK 54 usage_00191.pdb 1 ------VRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLK 54 usage_00236.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00237.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00238.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00239.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00240.pdb 1 --KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 58 usage_00241.pdb 1 ----INVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 56 usage_00250.pdb 1 MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK 60 VR DAE EF GK LFD V T GLRE W FGL Y W K usage_00005.pdb 60 LDKKVSAQEVRKENPLQFKFR------- 80 usage_00006.pdb 59 LDKKVSAQEVRKENPLQFKFR------- 79 usage_00036.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00037.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00038.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00039.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00041.pdb 55 LNKKVTAQDVRKESPLLFKFR------- 75 usage_00042.pdb 55 LNKKVTAQDVRKESPLLFKFR------- 75 usage_00048.pdb 59 LNKKVTAQDVRKESPLLFKFR------- 79 usage_00050.pdb 54 MDKKVL--------PVTFHFLAKFYPEN 73 usage_00052.pdb 55 LNKKVTQQDVKKENPLQFKFR------- 75 usage_00053.pdb 55 LNKKVTQQDVKKENPLQFKFRAKFFPED 82 usage_00056.pdb 55 LNKKVTQQDVKKENPLQFKFR------- 75 usage_00069.pdb 58 MDKKVLDHDVSKEEPVTFHFLAKFYPEN 85 usage_00078.pdb 59 LYKKVMQQDVKKENPLQFKFR------- 79 usage_00079.pdb 59 LYKKVMQQDVKKENPLQFKFRAKFYPED 86 usage_00082.pdb 60 LNKKVTQQDVKKENPLQFKFR------- 80 usage_00086.pdb 55 LNKKVTQQDVKKENPLQFKFR------- 75 usage_00189.pdb 59 LDKKVSAQEVRKENPLQFKFR------- 79 usage_00190.pdb 55 LDKKVSAQEVRKENPLQFKFR------- 75 usage_00191.pdb 55 LDKKVSAQEVRKENPLQFKFR------- 75 usage_00236.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00237.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00238.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00239.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00240.pdb 59 LNKKVTQQDVKKENPLQFKFR------- 79 usage_00241.pdb 57 LNKKVTQQDVKKENPLQFKFR------- 77 usage_00250.pdb 61 LNKKVTQQDVKKENPLQFKFR------- 81 KKV P F F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################