################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:37 2021 # Report_file: c_1044_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00111.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00277.pdb # 5: usage_00301.pdb # # Length: 48 # Identity: 1/ 48 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 48 ( 10.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 48 ( 54.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00111.pdb 1 --VNFVLHGHNP----LLSEIIVQAAREMEGEAKAAGAKGINLV-G-- 39 usage_00114.pdb 1 --VNVAVHGHNP----VLSDIIVSVSKEMENEARAAGATGINVV-GIC 41 usage_00115.pdb 1 --VNVAVHGHNP----VLSDIIVSVSKEMENEARAAGATGINVV-G-- 39 usage_00277.pdb 1 PIVFLTYYN--PIFRY-GIERFVKECAEAG-------VDGLIVP---- 34 usage_00301.pdb 1 --VIVVCTN-TH----KVADDIEAACG----------LPLL---H--- 25 V p iv g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################