################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:57 2021 # Report_file: c_0293_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00077.pdb # 4: usage_00088.pdb # 5: usage_00321.pdb # 6: usage_00323.pdb # 7: usage_00405.pdb # 8: usage_00412.pdb # # Length: 135 # Identity: 112/135 ( 83.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 112/135 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/135 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 GVVYKGYVNNTTVAVKKL-------------KQ-QFDQEIKVMAKCQHENLVELLGFSSD 46 usage_00018.pdb 1 GVVYKGYVNNTTVAVKKLEE----------LKQ-QFDQEIKVMAKCQHENLVELLGFSSD 49 usage_00077.pdb 1 GVVYKGYVNNTTVAVKKL--AAMVDITTEELKQ-QFDQEIKVMAKCQHENLVELLGFSSD 57 usage_00088.pdb 1 GVVYKGYVNNTTVAVKKL---------------AQFDQEIKVMAKCQHENLVELLGFSSD 45 usage_00321.pdb 1 GVVYKGYVNNTTVAVKKL--AA--------LKQ-QFDQEIKVMAKCQHENLVELLGFSS- 48 usage_00323.pdb 1 GVVYKGYVNNTTVAVKKL--AA--------LKQ-QFDQEIKVMAKCQHENLVELLGFSS- 48 usage_00405.pdb 1 GVVYKGYVNNTTVAVKKL--A-----E-E-LKQ-QFDQEIKVMAKCQHENLVELLGFSSD 50 usage_00412.pdb 1 GVVYKGYVNNTTVAVKKL--A---------LKQ-QFDQEIKVMAKCQHENLVELLGFSSD 48 GVVYKGYVNNTTVAVKKL QFDQEIKVMAKCQHENLVELLGFSS usage_00017.pdb 47 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 106 usage_00018.pdb 50 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 109 usage_00077.pdb 58 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 117 usage_00088.pdb 46 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 105 usage_00321.pdb 49 D--LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRNIKS 106 usage_00323.pdb 49 D--LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRNIKS 106 usage_00405.pdb 51 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 110 usage_00412.pdb 49 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKS 108 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR IKS usage_00017.pdb 107 ANILLDEAFTAKIS- 120 usage_00018.pdb 110 ANILLDEAFTAKIS- 123 usage_00077.pdb 118 ANILLDEAFTAKI-- 130 usage_00088.pdb 106 ANILLDEAFTAKIS- 119 usage_00321.pdb 107 ANILLDEAFTAKIS- 120 usage_00323.pdb 107 ANILLDEAFTAKISD 121 usage_00405.pdb 111 ANILLDEAFTAKI-- 123 usage_00412.pdb 109 ANILLDEAFTAKIS- 122 ANILLDEAFTAKI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################