################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:17 2021 # Report_file: c_0686_57.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00069.pdb # 2: usage_00142.pdb # 3: usage_00219.pdb # 4: usage_00420.pdb # 5: usage_00426.pdb # 6: usage_00838.pdb # # Length: 69 # Identity: 30/ 69 ( 43.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 69 ( 63.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 69 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 GNVTADKDGVADVSIEDSVISLSGDH-IIGRTLVVHEKADHLGK------K-TGNAGSRL 52 usage_00142.pdb 1 GNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAD----------------GSRL 44 usage_00219.pdb 1 -NVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRL 59 usage_00420.pdb 1 --VTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDLGKGGNEESTKTGNAGSRL 58 usage_00426.pdb 1 GNVT-AEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRL 59 usage_00838.pdb 1 GNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRL 60 VT dkdGVAdvsIeDSvISLsGdh IiGRTlVVHEKAD GsRL usage_00069.pdb 53 ACGV----- 56 usage_00142.pdb 45 ACGV----- 48 usage_00219.pdb 60 ACGV----- 63 usage_00420.pdb 59 ACGV----- 62 usage_00426.pdb 60 ACGV----- 63 usage_00838.pdb 61 ACGVIGIAQ 69 ACGV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################