################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:36 2021 # Report_file: c_1244_26.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00473.pdb # 2: usage_00732.pdb # 3: usage_00733.pdb # 4: usage_00833.pdb # 5: usage_00839.pdb # 6: usage_00841.pdb # 7: usage_01060.pdb # 8: usage_01061.pdb # 9: usage_01064.pdb # 10: usage_01065.pdb # 11: usage_01079.pdb # 12: usage_01084.pdb # 13: usage_01085.pdb # 14: usage_01086.pdb # 15: usage_01184.pdb # 16: usage_01185.pdb # 17: usage_01186.pdb # 18: usage_01187.pdb # 19: usage_01238.pdb # 20: usage_01239.pdb # 21: usage_01864.pdb # 22: usage_01868.pdb # # Length: 49 # Identity: 6/ 49 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 49 ( 55.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 49 ( 44.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00473.pdb 1 LEWD-----------SKSDALETLGFLNHYQMK-NP-NGPYPYTLKLCF 36 usage_00732.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_00733.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_00833.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_00839.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_00841.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01060.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01061.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01064.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01065.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01079.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01084.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01085.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01086.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01184.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01185.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01186.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLI- 40 usage_01187.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01238.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01239.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01864.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 usage_01868.pdb 1 ----GGLVVLSGGGTSGRMAFLMSVSFNQ----LMKGLGQKPLYTYLIA 41 SgrmAflmsvsfNq mk lGqkPlytyLi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################