################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:35 2021 # Report_file: c_0467_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00052.pdb # 2: usage_00186.pdb # 3: usage_00187.pdb # 4: usage_00188.pdb # 5: usage_00189.pdb # 6: usage_00262.pdb # 7: usage_00292.pdb # 8: usage_00549.pdb # # Length: 105 # Identity: 31/105 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/105 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/105 ( 18.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -SWKRGVFRNQ------GRHAERCFLSWFADDI--LSPNTNYEVTWYTSWSPCPECAGEV 51 usage_00186.pdb 1 --WKTGVFRNQV-DSETHCHAERCFLSWFCDDI--LSPNTKYQVTWYTSWSPCPDCAGEV 55 usage_00187.pdb 1 VSWKTGVFRNQV-DSETHCHAERCFLSWFCDDI--LSPNTKYQVTWYTSWSPCPDCAGEV 57 usage_00188.pdb 1 -SWKTGVFRNQV-DSETHCHAERCFLSWFCDDI--LSPNTKYQVTWYTSWSPCPDCAGEV 56 usage_00189.pdb 1 -SWKTGVFRNQV-DSETHCHAERCFLSWFCDDI--LSPNTKYQVTWYTSWSPCPDCAGEV 56 usage_00262.pdb 1 -----GVFRNQVDP-ETHCHAERCFLSWFCDDI--LSPNTNYEVTWYTSWSPCPECAGEV 52 usage_00292.pdb 1 -KIFRGQVYS-E---D-KYHPEMRFLSLVSKWKL--HRDQEYEVTWYISWSPCTKCARDM 52 usage_00549.pdb 1 --LDAKIFQGKV-YPKAKYHPEMRFLRWFHKWRQL-HHDQEYKVTWYVSWSPCTRCANSV 56 g f H E FLswf Y VTWY SWSPC CA v usage_00052.pdb 52 AEFLARHSNVNLTIKTAR--LYYFDDTDAAEGLRSLSQEGASVEI 94 usage_00186.pdb 56 AEFLARHSNVNLTIFTAR--LYYFQYPCYQEGLRSLSQEGVAVEI 98 usage_00187.pdb 58 AEFLARHSNVNLTIFTAR--LYYFQYPCYQEGLRSLSQEGVAVEI 100 usage_00188.pdb 57 AEFLARHSNVNLTIFTAR--LYYFQYPCYQEGLRSLSQEGVAVEI 99 usage_00189.pdb 57 AEFLARHSNVNLTIFTAR--LYYFQYPCYQEGLRSLSQEGVAVEI 99 usage_00262.pdb 53 AEFLARHSNVNLTIFTAR--LYYFWDTDYQEGLRSLSQEGASVEI 95 usage_00292.pdb 53 ATFLQENTHVTLTIFVARLY--YAWDPDYQEALRSLAQAGATIKI 95 usage_00549.pdb 57 ATFLAKDPKVTLTIFVAR--LYYFWKPDYQQALRILAEAGATMKI 99 A FLa V LTIf AR Yf yqe LRsL q G I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################