################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:34 2021 # Report_file: c_0467_83.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00305.pdb # 2: usage_00403.pdb # 3: usage_00404.pdb # 4: usage_00639.pdb # # Length: 84 # Identity: 10/ 84 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 84 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 84 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00305.pdb 1 -I-----LHFDFSRESGQQAVEELGLQQPPTAIA-TDDLIGLGVLSALSKKGFVVPKDVS 53 usage_00403.pdb 1 --GDGPVGAENN---YVFAAATELKQDDRPTAIS-GNDE-AIQIYIAA-ALGLRIPQDVS 52 usage_00404.pdb 1 --GDGPVGAENN---YVFAAATELKQDDRPTAIS-GNDE-AIQIYIAA-ALGLRIPQDVS 52 usage_00639.pdb 1 LV-----FEGNYSYEQGKALAERLL-ERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFE 54 n aaa eL pTai D a A G P Dvs usage_00305.pdb 54 IVSFNNALLSEIASPPLSTV---- 73 usage_00403.pdb 53 IVGFDDFRTVTALKPELTTAALPY 76 usage_00404.pdb 53 IVGFDDFRTVTALKPELTTA---- 72 usage_00639.pdb 55 IISGANSPITQYTYPTLTSV---- 74 Iv f P Ltt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################