################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:49 2021 # Report_file: c_0242_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00062.pdb # 6: usage_00069.pdb # 7: usage_00070.pdb # 8: usage_00110.pdb # 9: usage_00111.pdb # # Length: 145 # Identity: 54/145 ( 37.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 124/145 ( 85.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/145 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --RILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 57 usage_00009.pdb 1 -TRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 58 usage_00010.pdb 1 -TRILVKLEYFNPMSSV-DRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 57 usage_00011.pdb 1 --RILVKLEYFNPMSSV-DRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 56 usage_00062.pdb 1 -AKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAI 59 usage_00069.pdb 1 GTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 59 usage_00070.pdb 1 -TRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 58 usage_00110.pdb 1 GTRILVKLEYFNPMSSV-DRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 58 usage_00111.pdb 1 --RILVKLEYFNPMSSV-DRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIALCQAGAV 56 rilvKlEyfNPMsSV DRvGFnIvyqAiKdGrLkP gmeiiEStSGNTGiaLcqaGAv usage_00008.pdb 58 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 117 usage_00009.pdb 59 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 118 usage_00010.pdb 58 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 117 usage_00011.pdb 57 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 116 usage_00062.pdb 60 RGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAV-LAD- 117 usage_00069.pdb 60 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 119 usage_00070.pdb 59 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 118 usage_00110.pdb 59 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 118 usage_00111.pdb 57 FGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQ 116 fGYrVnIaMPstMSvERqmimkaFGAElILTegkkGMpGAieevnKmikeNPgky vAn usage_00008.pdb 118 FG---NPDNTAAHHYTANEIWEDTD 139 usage_00009.pdb 119 FG---NPDNTAAHHYTANEIWEDTD 140 usage_00010.pdb 118 FG---NPDNTAAHHYTANEIWEDTD 139 usage_00011.pdb 117 FG---NPDNTAAHHYTANEIWEDTD 138 usage_00062.pdb 118 --QFATKYNALIHEE---------- 130 usage_00069.pdb 120 FG---NPDNTAAHHYTANEIWEDTD 141 usage_00070.pdb 119 FG---NPDNTAAHHYTANEIWEDTD 140 usage_00110.pdb 119 FG---NPDNTAAHHYTANEIWEDTD 140 usage_00111.pdb 117 FG---NPDNTAAHHYTANEIWEDTD 138 npdNtaaHhy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################