################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:48 2021 # Report_file: c_0937_19.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00039.pdb # 2: usage_00184.pdb # 3: usage_00192.pdb # 4: usage_00326.pdb # 5: usage_00338.pdb # 6: usage_00345.pdb # 7: usage_00346.pdb # 8: usage_00503.pdb # 9: usage_00504.pdb # 10: usage_00548.pdb # 11: usage_00623.pdb # 12: usage_01028.pdb # 13: usage_01041.pdb # 14: usage_01118.pdb # 15: usage_01176.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 40 ( 47.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG-AA 31 usage_00184.pdb 1 -MFYGD-AEVG-D-NQQPFTFIL----DTGSANLWVP--- 29 usage_00192.pdb 1 -MFYGD-AEVG-D-NQQPFTFIL----DTGSANLWVP--- 29 usage_00326.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG--- 29 usage_00338.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG--- 29 usage_00345.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG--- 29 usage_00346.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG--- 29 usage_00503.pdb 1 -------MTVG-S-PPQTLNILV----DTGSSNFAVG--- 24 usage_00504.pdb 1 -------MTVG-S-PPQTLNILV----DTGSSNFAVG--- 24 usage_00548.pdb 1 TEYFGT-IGIG-T-PAQDFTVIF----DTGSSNLWVP--- 30 usage_00623.pdb 1 -GYYVE-MTVG-S-PPQTLNILV----DTGSSNFAVG--- 29 usage_01028.pdb 1 -------EIEVLN-KKVRATIMT----GDTPIN-IF---- 23 usage_01041.pdb 1 -------MTVG-S-PPQTLNILV----DTGSSNFAVG--- 24 usage_01118.pdb 1 -VP-AVVGVRV-EERVNFCPAVWNTGLSADPPLFG--VS- 34 usage_01176.pdb 1 -------MTVG-S-PPQTLNILV----DTGSSNFAVG--- 24 n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################