################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:31 2021 # Report_file: c_0396_50.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00100.pdb # 2: usage_00150.pdb # 3: usage_00151.pdb # 4: usage_00311.pdb # 5: usage_00343.pdb # 6: usage_00398.pdb # 7: usage_00555.pdb # 8: usage_00604.pdb # 9: usage_00618.pdb # # Length: 119 # Identity: 3/119 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/119 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/119 ( 36.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 -------SVTDVTTSSLRLNWEAP-PGA-FDSFLLRFGVPSPSTLEPHPRPLLQRELMVP 51 usage_00150.pdb 1 VGSPKGISFSDITENSATVSWTPPRS-R-VDSYRVSYVPIT------G---GTPNVVTVD 49 usage_00151.pdb 1 ----KGISFSDITENSATVSWTPPRS-R-VDSYRVSYVPIT------G---GTPNVVTVD 45 usage_00311.pdb 1 ------FDSSDITANSFTVHWVAPRA-P-ITGYIIRHHAEH------S-V-GRPRQDRVP 44 usage_00343.pdb 1 -----DLEVVAATPTSLLISWPPPSH-G-YGYYRITYGETG------G-N-SPVQEFTVP 45 usage_00398.pdb 1 -----DVSVKVLSSSEISVSWHHV---KSVEGYQIRYWAAH------D-KEAAAQRVQVS 45 usage_00555.pdb 1 ----TDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAG------E-G-IPIFEDFVD 47 usage_00604.pdb 1 VPPPTDLRFTNIGPDTMRVTWAPPPS-IDLTNFLVRYSPVK------N-E-EDVAELSIS 51 usage_00618.pdb 1 ----------DITANSFTVHWIAPRA-T-ITGYRIRHHPEH------F-S-GRPREDRVP 40 W v usage_00100.pdb 52 GTRHSAVLRDLRSGTLYSLTLYGLRG----PH-KADSIQGTARTLSG-P---------- 94 usage_00150.pdb 50 GSKTRTKLVKLVPGVDYNVNIISVKG----FE-ESEPISGILKT--------------- 88 usage_00151.pdb 46 GSKTRTKLVKLVPGVDYNVNIISVKG----FE-ESEPISGILKT--------------- 84 usage_00311.pdb 45 PSRNSITLTNLNPGTEYVVSIIAVNG----RE-ESPPLIGQQATV-------------- 84 usage_00343.pdb 46 PGKGTATISGLKPGVDYTITVYAVEYPYKHSGYYHRPISINYRTEI------------- 91 usage_00398.pdb 46 NQEYSTKLENLKPNTRYHIDVSAFNS----AG-YGPPSRTIDII--------------- 84 usage_00555.pdb 48 SSVGYYTVTGLEPGIDYDISVITLIN----GG-ESAPTTLTQQTAVPPPTDLRFTNIGP 101 usage_00604.pdb 52 PSDNAVVLTNLLPGTEYVVSVSSVYE----QH-ESTPLRGRQKTGLDSPT-G------- 97 usage_00618.pdb 41 HSRNSITLTNLTPGTEYVVSIVALNG----RE-ESPPLIGQQSTV-------------- 80 L pg Y p t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################