################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:54 2021 # Report_file: c_0798_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00179.pdb # 2: usage_00180.pdb # 3: usage_00247.pdb # 4: usage_00248.pdb # 5: usage_00282.pdb # # Length: 67 # Identity: 26/ 67 ( 38.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 67 ( 55.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 67 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 LTLVDL-PG---TKVPVGDQPPDIEFQIRD-L-QFVTKENCLILAVSPANSDLANSDALK 54 usage_00180.pdb 1 LTLVDL-PG---TKVPVGDQPPDIEFQIRD-L-QFVTKENCLILAVSPANSDLANSDALK 54 usage_00247.pdb 1 -TLIDLPGI---TKVPVGDQPPDIEYQIREMIMQFITRENCLILAVTPANTDLANSDALK 56 usage_00248.pdb 1 -TLIDLPGI---TKVPVGDQPPDIEYQIREMIMQFITRENCLILAVTPANTDLANSDALK 56 usage_00282.pdb 1 -TLVDL-PGMTK----------DIELQIRELILRFISNPNSIILAVTAANTDMATSEALK 48 TL DL DIE QIR qF t eNclILAV pAN DlAnSdALK usage_00179.pdb 55 VAKEV-- 59 usage_00180.pdb 55 VAKEVDP 61 usage_00247.pdb 57 LAKEV-- 61 usage_00248.pdb 57 LAKEV-- 61 usage_00282.pdb 49 ISREVDP 55 akEV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################