################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:07 2021 # Report_file: c_1434_164.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02126.pdb # 2: usage_02127.pdb # 3: usage_02195.pdb # 4: usage_02196.pdb # 5: usage_02197.pdb # 6: usage_02198.pdb # 7: usage_03207.pdb # 8: usage_03208.pdb # # Length: 88 # Identity: 35/ 88 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 88 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 88 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02126.pdb 1 AEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTL 60 usage_02127.pdb 1 AEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTL 60 usage_02195.pdb 1 ---NAAAERVSAKNALESYAFNK-SAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTL 56 usage_02196.pdb 1 ---NAAAERVSAKNALESYAFNK-SAVEG-----KISEADKKKVLDKCQEVISWLDANTL 51 usage_02197.pdb 1 ----AAAERVSAKNALESYAFNK-SAVED-----KISEADKKKVLDKCQEVISWLDANTL 50 usage_02198.pdb 1 ----AAAERVSAKNALESYAFNK-SAVED-----KISEADKKKVLDKCQEVISWLDANTL 50 usage_03207.pdb 1 --------DPFTEFSLESYAFNMKATVED--E-KKINDEDKQKILDKCNEIINWLDKNQT 49 usage_03208.pdb 1 --------DPFTEFSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQT 52 LESYAFN VEd KI DK K LDKC E I WLD N usage_02126.pdb 61 AEKDEFEHKRKELEQVCNPIISGLYQ-- 86 usage_02127.pdb 61 AEKDEFEHKRKELEQVCNPIISGLYQ-- 86 usage_02195.pdb 57 AEKDEFEHKRKELEQVCNPIISGLYQG- 83 usage_02196.pdb 52 AEKDEFEHKRKELEQVCNPIISGLYQG- 78 usage_02197.pdb 51 AEKDEFEHKRKELEQVCNPII------- 71 usage_02198.pdb 51 AEKDEFEHKRKELEQVCNPIISGLYQGA 78 usage_03207.pdb 50 A---EFEHQQKELEKVC----------- 63 usage_03208.pdb 53 AEKEEFEHQQKELEKVCNPIITKLYQS- 79 A EFEH KELE VC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################