################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:27 2021 # Report_file: c_0404_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00079.pdb # 3: usage_00109.pdb # 4: usage_00203.pdb # 5: usage_00204.pdb # 6: usage_00223.pdb # 7: usage_00271.pdb # 8: usage_00274.pdb # 9: usage_00359.pdb # # Length: 97 # Identity: 47/ 97 ( 48.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 97 ( 55.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 97 ( 29.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 RQVKPEAWLSH---------QLVCHVSGFYPKPVWVMWMRGE------QRGDILPSADGT 45 usage_00079.pdb 1 KQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADET 60 usage_00109.pdb 1 RQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNANWT 60 usage_00203.pdb 1 RQVKPEAWLSHGPSPGPGHLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQRGDILPSADGT 60 usage_00204.pdb 1 RQVKPEAWLSHGPSPGPGHLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQRGDILPSADGT 60 usage_00223.pdb 1 KQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADET 60 usage_00271.pdb 1 KQVKPKAWLSRGPSP----LLLVCHVSGFYPKPVWVKWMR---QQ-GTQPGDILPNADET 52 usage_00274.pdb 1 KQVKPEAWLSSGPSPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEEPGTRQGDVMPNADST 60 usage_00359.pdb 1 ---KPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNAQGT 57 KP AWLS LVCHVSGFYPKPVwV WMR GD lP A T usage_00017.pdb 46 WYLRATLE-------DLSCRVKHSSLEGQDIVLYW-- 73 usage_00079.pdb 61 WYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYW-- 95 usage_00109.pdb 61 WYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYW-- 95 usage_00203.pdb 61 WYLRATLEVAAGEAADLSCRVKHSSLEGQDIVLYW-- 95 usage_00204.pdb 61 WYLRATLEVAAGEAADLSCRVKHSSLEGQDIVLYW-- 95 usage_00223.pdb 61 WYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYW-- 95 usage_00271.pdb 53 WYLRATLDVVA---AGLSCRVKHSSLEGQDIVLYW-- 84 usage_00274.pdb 61 WYLRVTLDVAAGEVAGLSCQVKHSSLGDQDIILYW-- 95 usage_00359.pdb 58 WYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWHH 94 WYLraTL LsCrVKHSSL gQDI LYW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################