################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:47 2021 # Report_file: c_1484_46.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00022.pdb # 2: usage_00024.pdb # 3: usage_00028.pdb # 4: usage_00032.pdb # 5: usage_00204.pdb # 6: usage_00205.pdb # 7: usage_00761.pdb # # Length: 104 # Identity: 41/104 ( 39.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/104 ( 40.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/104 ( 57.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 -VVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKE 59 usage_00024.pdb 1 -VVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKE 59 usage_00028.pdb 1 -VVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKE 59 usage_00032.pdb 1 GVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKE 60 usage_00204.pdb 1 --VPTEITKVFNQRKEHKGYL--------------------------------------- 19 usage_00205.pdb 1 GVVPTEITKVFNQRKEHKGYL-AAQRNGEIIKE-A----------LDVDYRFD--DEIKE 46 usage_00761.pdb 1 --VPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKE 58 VPTEITKVFNQRKEHKGY usage_00022.pdb 60 KIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGN 103 usage_00024.pdb 60 KIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGN 103 usage_00028.pdb 60 KIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGN 103 usage_00032.pdb 61 KIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGN 104 usage_00204.pdb 20 ----------R--------TEVA-GTAQINRKLLINSLYGALGN 44 usage_00205.pdb 47 KIKKLSAKSLNE-LFRAQRTEVA-GTAQINRKLLINSLYGALGN 88 usage_00761.pdb 59 KIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGN 102 n TEVA TAQINRKLLINSLYGALGN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################