################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:59 2021 # Report_file: c_1286_32.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00007.pdb # 2: usage_00179.pdb # 3: usage_00230.pdb # 4: usage_00468.pdb # 5: usage_00469.pdb # 6: usage_00576.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 34 ( 8.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 34 ( 55.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 IHFS-----IN----KNL--FLQALNTTKRA--- 20 usage_00179.pdb 1 -----AIHFIHQ---PWY--FTTTYNVVKPFL-- 22 usage_00230.pdb 1 -----GIHLINE---PVI--FHAVFSMIKPFLT- 23 usage_00468.pdb 1 -----AIHFIHQ---PWY--FTTTYNVVKPFL-- 22 usage_00469.pdb 1 -----AIHFIHQ---PWY--FTTTYNVVKPFL-- 22 usage_00576.pdb 1 ----KVLLLSI-QNPLY-PITVDVLYTVCNPV-G 27 i f k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################