################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:29:51 2021 # Report_file: c_0888_73.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00088.pdb # 2: usage_00488.pdb # 3: usage_00489.pdb # 4: usage_00490.pdb # 5: usage_00491.pdb # 6: usage_00492.pdb # 7: usage_00493.pdb # 8: usage_00494.pdb # 9: usage_00495.pdb # 10: usage_00496.pdb # 11: usage_00497.pdb # 12: usage_00498.pdb # 13: usage_00499.pdb # 14: usage_00500.pdb # 15: usage_00501.pdb # 16: usage_00502.pdb # 17: usage_00839.pdb # 18: usage_00840.pdb # 19: usage_00841.pdb # 20: usage_00842.pdb # # Length: 109 # Identity: 38/109 ( 34.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/109 ( 78.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/109 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 AAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGG 60 usage_00488.pdb 1 DPYGRAQARFWADFVDKKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 60 usage_00489.pdb 1 -----------------KFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 43 usage_00490.pdb 1 -----------------KFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 43 usage_00491.pdb 1 -----------------KFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 43 usage_00492.pdb 1 ----------------KKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 44 usage_00493.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 usage_00494.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 usage_00495.pdb 1 ----------------KKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 44 usage_00496.pdb 1 -PYGRAQARFWADFVDKKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 59 usage_00497.pdb 1 -----------------KFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 43 usage_00498.pdb 1 -----------------KFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 43 usage_00499.pdb 1 ----------------KKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 44 usage_00500.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 usage_00501.pdb 1 --YGRAQARFWADFVDKKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 58 usage_00502.pdb 1 --YGRAQARFWADFVDKKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 58 usage_00839.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 usage_00840.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 usage_00841.pdb 1 -PYGRAQARFWADFVDKKFTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 59 usage_00842.pdb 1 ------------------FTDAQFKVWGKKGEEQEAGKKEFIEAVKILESELGDKPYFGG 42 ftDaqfkvWgkKGEeQeAgkkEfiEavkiLEsELGDkpyFGG usage_00088.pdb 61 GGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCG--- 106 usage_00488.pdb 61 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEKE 106 usage_00489.pdb 44 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 86 usage_00490.pdb 44 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEKE 89 usage_00491.pdb 44 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEK- 88 usage_00492.pdb 45 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 87 usage_00493.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 85 usage_00494.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 85 usage_00495.pdb 45 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 87 usage_00496.pdb 60 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 102 usage_00497.pdb 44 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 86 usage_00498.pdb 44 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 86 usage_00499.pdb 45 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEKE 90 usage_00500.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 85 usage_00501.pdb 59 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 101 usage_00502.pdb 59 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 101 usage_00839.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 85 usage_00840.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCM--- 85 usage_00841.pdb 60 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEKE 105 usage_00842.pdb 43 -D--SFGYVDISLITFSSWFQAYEKFGNFSIESESPKLIAWAKRCMEKE 88 d sfGyVDisLitFssWFqaYEkfGnFSiEsesPkLiAWAkRCm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################