################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:29 2021 # Report_file: c_0815_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00038.pdb # 4: usage_00045.pdb # 5: usage_00060.pdb # 6: usage_00076.pdb # 7: usage_00101.pdb # 8: usage_00110.pdb # 9: usage_00112.pdb # 10: usage_00125.pdb # 11: usage_00130.pdb # # Length: 53 # Identity: 20/ 53 ( 37.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 53 ( 47.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 53 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 usage_00002.pdb 1 QGDAGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 usage_00038.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFL------- 44 usage_00045.pdb 1 QGDSGGPLMCRDRAENTFVVVGITSWGVGCARAKRPGVYTSTWPYLNWIASK- 52 usage_00060.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFL------- 44 usage_00076.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 usage_00101.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 usage_00110.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFL------- 44 usage_00112.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 usage_00125.pdb 1 KGDSGGPLSCKH--NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK- 50 usage_00130.pdb 1 QGDSGGPLVCSL--QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 51 qGDsGGPL C l GI SWG GCA PGVYT v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################