################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:11 2021 # Report_file: c_1199_106.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00226.pdb # 2: usage_00227.pdb # 3: usage_00494.pdb # 4: usage_00518.pdb # 5: usage_00763.pdb # 6: usage_00858.pdb # 7: usage_00859.pdb # 8: usage_01122.pdb # 9: usage_01580.pdb # 10: usage_01702.pdb # 11: usage_01706.pdb # 12: usage_01962.pdb # 13: usage_02221.pdb # 14: usage_02237.pdb # 15: usage_02238.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 57 ( 78.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00226.pdb 1 -EYQLFEEL-GK--------------GSV-VRRCVKVL--A---GQEYAAMIIN--- 32 usage_00227.pdb 1 -YKVTSQVL-GLGI------------NGK-VLQIFNKR--T---QEKFALKMLQ--- 34 usage_00494.pdb 1 ---K-DIGSGNF---------------GV-ARLMRDKQ--S---NELVAVKYIE--- 29 usage_00518.pdb 1 -----EKI-------K-------NT-PGAYIIR--GQN--N---S-AHKLRIR---- 25 usage_00763.pdb 1 ----------------VQEYVPGHS-GQF-VLH-MRKA--S---G-ALLEFAKLA-- 30 usage_00858.pdb 1 --LDFLGE-------G-------Q--FAT-VYKARDKN--T---NQIVAIKKI---- 29 usage_00859.pdb 1 --LDFLGE-------G-------Q--FAT-VYKARDKN--T---NQIVAIKK----- 28 usage_01122.pdb 1 ------I-------KE-------G--NKP-VLFQGNTNPTD---VVVAV-------- 23 usage_01580.pdb 1 L---AKIG-------Q-------G-TFGE-VFKARHRK--T---GQKVALKK----- 28 usage_01702.pdb 1 -HLKFLQQL-G----K-------G--FGS-VEMCRYDP-LQDNTGEVVAVKKL---- 36 usage_01706.pdb 1 -----VAE-------I-------G--E-K-VFKARDLK--N---GRFVALKRVR--- 26 usage_01962.pdb 1 ---EKIGE-------G-------T--YGV-VYKARNKL--T---GEVVALKKIR--- 29 usage_02221.pdb 1 -DFEIGRPL-GK---G-------K--FGN-VYLAREKQ--S---KFILALKVLF--- 34 usage_02237.pdb 1 ---EKIGE-------G-------T--YGV-VYKARNKL--T---GEVVALKKIR-LD 31 usage_02238.pdb 1 ---EKIGE-------G-------T--YGV-VYKARNKL--T---GEVVALKKIR--- 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################