################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:06 2021 # Report_file: c_1013_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00077.pdb # 3: usage_00131.pdb # 4: usage_00133.pdb # 5: usage_00198.pdb # 6: usage_00226.pdb # # Length: 72 # Identity: 24/ 72 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 72 ( 34.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 72 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-KTIGG-GDDSFNTFFSETGA 56 usage_00077.pdb 1 -RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPS-D------GDDSFNTFFSETGA 52 usage_00131.pdb 1 -REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHG--DSDL-QL-ERINVYYNEATG 55 usage_00133.pdb 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-KTIGG-GDDSFNTFFSETGA 58 usage_00198.pdb 1 -REIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVG--DSDL-QL-ERISVYYNEASS 55 usage_00226.pdb 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-KTIGG-GDDSFNTFFSETGA 58 E I GQ G QIG WE EHGI P G n E usage_00002.pdb 57 GKHVPRAVFVDL 68 usage_00077.pdb 53 GKHVPRAVFVD- 63 usage_00131.pdb 56 NKYVPRAILVDL 67 usage_00133.pdb 59 GKHVPRAVFVDL 70 usage_00198.pdb 56 HKYVPRAILVDL 67 usage_00226.pdb 59 GKHVPRAVFVDL 70 K VPRA VD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################