################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:55:06 2021 # Report_file: c_0041_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00056.pdb # 5: usage_00057.pdb # 6: usage_00058.pdb # 7: usage_00059.pdb # 8: usage_00082.pdb # 9: usage_00091.pdb # 10: usage_00139.pdb # 11: usage_00147.pdb # 12: usage_00180.pdb # 13: usage_00206.pdb # # Length: 189 # Identity: 130/189 ( 68.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 135/189 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/189 ( 20.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------------------------TLMSVEIGQSPNVYQARFEAVAWSATACHDG 31 usage_00002.pdb 1 CRTFFLTQGSLLNDKHSNG-----RSPYRTLMSVEIGQSPNVYQARFEAVAWSATACHDG 55 usage_00003.pdb 1 CRTFFLTQGSLLNDKHSNG-TEKDRSPYRTLMSVEIGQSPNVYQARFEAVAWSATACHDG 59 usage_00056.pdb 1 CRTFFLTQGSLLNDKHSNGTV-KDRSPFRTLMSVKVGQSPNVYQARFEAVAWSATACHDG 59 usage_00057.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 usage_00058.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 usage_00059.pdb 1 ---------------------------FRTLMSVEVGQSPNVYQARFEAVAWSATACHDG 33 usage_00082.pdb 1 -----------------------------TLMSVKVGQSPNVYQARFEAVAWSATACHDG 31 usage_00091.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 usage_00139.pdb 1 ---------------------------FRTLMSVEVGQSPNVYQARFEAVAWSATACHDG 33 usage_00147.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 usage_00180.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 usage_00206.pdb 1 -----------------------------TLMSVEVGQSPNVYQARFEAVAWSATACHDG 31 TLMSV GQSPNVYQARFEAVAWSATACHDG usage_00001.pdb 32 KKWMTIGVTGPDAKAVAVVHYGGIPTDVINSWAGDILRTQESSCTCILGECYWVMTDGPA 91 usage_00002.pdb 56 KKWMTIGVTGPDAKAVAVVHYGGIPTDVINSWAGDILRTQESSCTCILGECYWVMTDGPA 115 usage_00003.pdb 60 KKWMTIGVTGPDAKAVAVVHYGGIPTDVINSWAGDILRTQESSCTCILGECYWVMTDGPA 119 usage_00056.pdb 60 KKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPA 119 usage_00057.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 usage_00058.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 usage_00059.pdb 34 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 93 usage_00082.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 usage_00091.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 usage_00139.pdb 34 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 93 usage_00147.pdb 32 KKWMAIGVTGPDSKAVAVVHYGGVPTDVVNSWAGDILRTQESSCTCIQGNCYWVMTDGPA 91 usage_00180.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 usage_00206.pdb 32 KKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPA 91 KKWMt GVTGPD KAVAV HYGG PTDV NSWAGDILRTQESSCTCI G CYWVMTDGPA usage_00001.pdb 92 NRQAQYRAFKAKQGKIIGQVEISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 151 usage_00002.pdb 116 NRQAQYRAFKAKQGKIIGQVEISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 175 usage_00003.pdb 120 NRQAQYRAFKAKQGKIIGQVEISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 179 usage_00056.pdb 120 NRQAQYRIYKANQGRIIGQADISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 179 usage_00057.pdb 92 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDGWTGTNRPVLVIS 151 usage_00058.pdb 92 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDGWTGTNRPVLVIS 151 usage_00059.pdb 94 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDGWTGTNRPVLVIS 153 usage_00082.pdb 92 NRQAQYRIYKANQGRIIGQADISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 151 usage_00091.pdb 92 NRQAQYRIYKANQGRIIGQADISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 151 usage_00139.pdb 94 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 153 usage_00147.pdb 92 NRQAQYRIYKANQGKIIGRKDVSFSGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLIIS 151 usage_00180.pdb 92 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDGWTGTNRPVLVIS 151 usage_00206.pdb 92 NRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVIS 151 NRQAQYR KA QG IIGq iSFnGGHIEECSCYPNDGKVECVCRD WTGTNRPVLvIS usage_00001.pdb 152 PDLSYRVGY 160 usage_00002.pdb 176 PDLSYRVGY 184 usage_00003.pdb 180 PDLSYRVGY 188 usage_00056.pdb 180 PDLSYRVGY 188 usage_00057.pdb --------- usage_00058.pdb 152 PDLSYRVGY 160 usage_00059.pdb 154 PDLSYRVGY 162 usage_00082.pdb 152 PDLSYRVGY 160 usage_00091.pdb 152 PDLSYRVGY 160 usage_00139.pdb 154 PDLSYRVGY 162 usage_00147.pdb 152 PDLSYRVGY 160 usage_00180.pdb 152 PDLSYRVGY 160 usage_00206.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################