################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:16 2021 # Report_file: c_1190_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00234.pdb # 2: usage_00606.pdb # 3: usage_00617.pdb # 4: usage_00618.pdb # 5: usage_00707.pdb # 6: usage_00770.pdb # 7: usage_00819.pdb # 8: usage_00820.pdb # 9: usage_00821.pdb # 10: usage_00822.pdb # 11: usage_00823.pdb # 12: usage_00824.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 42 ( 4.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 42 ( 59.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 SV--VGMYRNEET---------------LEPVPYFQKL---V 22 usage_00606.pdb 1 -I--VTGRLKQRSFE-----------TVVEVEVDEIGP---- 24 usage_00617.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00618.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00707.pdb 1 -K--VTGILDIKQD--SPVKRGSRAVFDIYMKVSSIEV---- 33 usage_00770.pdb 1 -LTFSIVVLDE-----------------HEVVPVARS-YLPQ 23 usage_00819.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00820.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00821.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00822.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00823.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 usage_00824.pdb 1 -I--VTGILRVVLE-KR----EKTPIFRKILEVNHIEP---- 30 v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################