################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:22 2021 # Report_file: c_1159_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00316.pdb # 2: usage_00317.pdb # 3: usage_00526.pdb # 4: usage_00527.pdb # 5: usage_00528.pdb # 6: usage_00535.pdb # 7: usage_01045.pdb # 8: usage_01649.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 38 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 38 ( 44.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 IIV-K-GARAHNLKNIDVEIPRG----KLVVLTGL--- 29 usage_00317.pdb 1 LEV-V-GAREHNLKNVSVKIPLG----TFVAVTGV--- 29 usage_00526.pdb 1 VQV-R-GARQHNLKDISVKVPRD----ALVVFTGV--- 29 usage_00527.pdb 1 VQV-R-GARQHNLKDISVKVPRD----ALVVFTGV--- 29 usage_00528.pdb 1 VQV-R-GARQHNLKDISVKVPRD----ALVVFTGV--- 29 usage_00535.pdb 1 IIV-K-GARAHNLKNIDVEIPRG----KLVVLTGL--- 29 usage_01045.pdb 1 ---KLVVMTRGHNPVIAAEQTADG---TVVVHEV---- 28 usage_01649.pdb 1 -GV-W-GKG----ERTYAEQDFR-VGGTRWHRLLRMPV 30 g v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################