################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:05 2021 # Report_file: c_0606_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00066.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00093.pdb # 5: usage_00094.pdb # 6: usage_00209.pdb # 7: usage_00306.pdb # 8: usage_00307.pdb # # Length: 84 # Identity: 23/ 84 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 84 ( 27.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 84 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 ---APEKAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPK 57 usage_00091.pdb 1 TLE--RVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR- 57 usage_00092.pdb 1 TLE--RVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR- 57 usage_00093.pdb 1 TLE--RVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR- 57 usage_00094.pdb 1 TLE--RVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR- 57 usage_00209.pdb 1 ---APEKAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPK 57 usage_00306.pdb 1 ---SPENKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSR- 56 usage_00307.pdb 1 ---SPENKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSR- 56 G FPYL D Q VAKAY A TP D Y G D usage_00066.pdb 58 DP--S-KVQS-HDLEAAIEALLRG 77 usage_00091.pdb 58 --PGNGKDVTGADLRAAVDAVLKG 79 usage_00092.pdb 58 --PGNGKDVTGADLRAAVDAVLKG 79 usage_00093.pdb 58 --PGNGKDVTGADLRAAVDAVLKG 79 usage_00094.pdb 58 --PGNGKDVTGADLRAAVDAVLKG 79 usage_00209.pdb 58 DP--S-KVQS-HDLEAAIEALLRG 77 usage_00306.pdb 57 --PNNGIPVTGESIRAALDALLE- 77 usage_00307.pdb 57 --PNNGIPVTGESIRAALDALLEG 78 AA A L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################