################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:56:58 2021 # Report_file: c_0669_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00199.pdb # 2: usage_00200.pdb # 3: usage_00231.pdb # 4: usage_00991.pdb # 5: usage_01607.pdb # 6: usage_01682.pdb # 7: usage_01683.pdb # # Length: 115 # Identity: 25/115 ( 21.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/115 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/115 ( 35.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00199.pdb 1 --KTDLVLRNYYFNRDF--------------LVDEWAQGFILKFSSGYTPGTVGVGLDAI 44 usage_00200.pdb 1 --KTDLVLRNYYFNRDFRD------------LVDEWAQGFILKFSSGYTPGTVGVGLDAI 46 usage_00231.pdb 1 -SKASIELRNFYFNRDFR-QEGASQ-----SKAEEWAQGFLLRYESGYTEGTIGFGVDAI 53 usage_00991.pdb 1 -AQANLTLRNFYFNRNFT-N-----PTKAQGKAEEWTQSFILDAKSGFTQGTVGFGMDVL 53 usage_01607.pdb 1 GSSLQLLTRNYYFNHDRR--------------SKEWAQGFIATFQSGYTPGVVGFGVDAY 46 usage_01682.pdb 1 --KTDLVLRNYYFNRDF--------------LVDEWAQGFILKFSSGYTPGTVGVGLDAI 44 usage_01683.pdb 1 --KTDLVLRNYYFNRDFRD------------LVDEWAQGFILKFSSGYTPGTVGVGLDAI 46 l lRN YFNrdf EWaQgFil SGyT GtvG G Da usage_00199.pdb 45 GLFGVKLN----S------NSELLPLHDDGRAADNYGRVGVAAKLRVSASELKIG 89 usage_00200.pdb 47 GLFGVKLNS------------ELLPLHDDGRAADNYGRVGVAAKLRVSASELKIG 89 usage_00231.pdb 54 GLLGVKLD----S-------------------QDDYGEAGITAKLRASKSTLKIG 85 usage_00991.pdb 54 GLYSLKLD----GG-KGTGGTQLLPLDHDGRPADNFGRLGVAFKARLSQTEVKVG 103 usage_01607.pdb 47 GMLGLKLY----ES-GK--------------APDEFSSGGAALKIRAFDTELKLG 82 usage_01682.pdb 45 GLFGVKLN----S------NSELLPLHDDGRAADNYGRVGVAAKLRVSASELKIG 89 usage_01683.pdb 47 GLFGVKLN-SGT-SN------ELLPLHDDGRAADNYGRVGVAAKLRVSASELKIG 93 Gl g KL D g G a K R s elK G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################