################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:51 2021 # Report_file: c_0981_30.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00011.pdb # 2: usage_00065.pdb # 3: usage_00127.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00169.pdb # 8: usage_00183.pdb # 9: usage_00317.pdb # 10: usage_00373.pdb # 11: usage_00374.pdb # # Length: 58 # Identity: 2/ 58 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 58 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 58 ( 46.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 GYSVSLPR--------KDYVFKLQF-KSHVYFFRAESKYTFERWMDVIKRAS------ 43 usage_00065.pdb 1 SAVFDCKADA------EEGIFEIKT-PSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 51 usage_00127.pdb 1 GCVVTSV---------EENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS------ 43 usage_00128.pdb 1 GCVVTSV---------EENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS------ 43 usage_00129.pdb 1 GCVVTSV---------EENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS------ 43 usage_00130.pdb 1 -CVVTSVES-------EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR----- 45 usage_00169.pdb 1 GFTVTLVKD---ENSES-KVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV----- 49 usage_00183.pdb 1 -EIKVHSA--------DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSK------ 43 usage_00317.pdb 1 -CEIKVHSADNT-------R-ELIIPGEQHFY-KAVNAAERQRWLVA----------- 37 usage_00373.pdb 1 GCVVTSVE--------EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR----- 45 usage_00374.pdb 1 GCVVTSVE-------EEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA------- 44 A W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################