################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:33 2021 # Report_file: c_0770_25.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00148.pdb # 2: usage_00440.pdb # 3: usage_00550.pdb # 4: usage_00552.pdb # 5: usage_00553.pdb # 6: usage_00554.pdb # # Length: 75 # Identity: 9/ 75 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 75 ( 48.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 75 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00148.pdb 1 ----VVVDCGNGVAGVIAPQLIEA--LGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIA 54 usage_00440.pdb 1 ----LYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAV 56 usage_00550.pdb 1 ----VVVDTSNGAGSLTLPYLLRE--LGCKVITVNAQPDGYFPARNPEPNEENLKEFMEI 54 usage_00552.pdb 1 ----VVVDTSNGAGSLTLPYLLRE--LGCKVITVNAQPDGYFPARNPEPNEENLKEFMEI 54 usage_00553.pdb 1 ----VVVDTSNGAGSLTLPYLLRE--LGCKVITVNAQPDGYFPARNPEPNEENLKEFMEI 54 usage_00554.pdb 1 RKPFVVVDTSNGAGSLTLPYLLRE--LGCKVITVNAQPDGYFPARNPEPNEENLKEFMEI 58 vvvD nGag lp llr Lgc Vi pdg Fp nPeP nl usage_00148.pdb 55 KVKAENA-DLGLAFD 68 usage_00440.pdb 57 LGPET-PPSFAVATD 70 usage_00550.pdb 55 VKALG-A-DFGVAQD 67 usage_00552.pdb 55 VKALG-A-DFGVAQD 67 usage_00553.pdb 55 VKALG-A-DFGVAQD 67 usage_00554.pdb 59 VKALG-A-DFGVAQD 71 a dfgvA D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################