################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:46:33 2021 # Report_file: c_0542_2.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00131.pdb # 6: usage_00132.pdb # 7: usage_00166.pdb # 8: usage_00167.pdb # 9: usage_00168.pdb # 10: usage_00169.pdb # 11: usage_00188.pdb # 12: usage_00189.pdb # 13: usage_00190.pdb # 14: usage_00191.pdb # 15: usage_00192.pdb # 16: usage_00193.pdb # 17: usage_00194.pdb # 18: usage_00195.pdb # 19: usage_00196.pdb # 20: usage_00201.pdb # 21: usage_00202.pdb # 22: usage_00203.pdb # 23: usage_00239.pdb # 24: usage_00240.pdb # 25: usage_00249.pdb # 26: usage_00250.pdb # 27: usage_00251.pdb # 28: usage_00252.pdb # 29: usage_00253.pdb # 30: usage_00254.pdb # 31: usage_00255.pdb # 32: usage_00261.pdb # 33: usage_00262.pdb # 34: usage_00263.pdb # 35: usage_00264.pdb # # Length: 229 # Identity: 155/229 ( 67.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 156/229 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 73/229 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00007.pdb 1 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 60 usage_00008.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00009.pdb 1 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 60 usage_00131.pdb 1 ------MYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 54 usage_00132.pdb 1 ------MYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 54 usage_00166.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00167.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00168.pdb 1 ---FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 57 usage_00169.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00188.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00189.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00190.pdb 1 LAFFRNMYDKYRDAFLSHLN-YSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00191.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00192.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00193.pdb 1 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 60 usage_00194.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00195.pdb 1 ---FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 57 usage_00196.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00201.pdb 1 LAFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 60 usage_00202.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00203.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00239.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00240.pdb 1 ------MYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 54 usage_00249.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00250.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00251.pdb 1 ---FRNMYDKYRDAFLSHLNE---EEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 54 usage_00252.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHIS-YYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00253.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00254.pdb 1 --FFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 58 usage_00255.pdb 1 ---FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 57 usage_00261.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00262.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00263.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 usage_00264.pdb 1 -AFFRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYE 59 MYDKYRDAFLSHLN EEEIKEHIS YYKLLFDYNCLGGKNNRGILVILIYE usage_00006.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00007.pdb 61 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 119 usage_00008.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00009.pdb 61 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 119 usage_00131.pdb 55 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 113 usage_00132.pdb 55 YVK--NINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 112 usage_00166.pdb 59 YVK--NINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 116 usage_00167.pdb 60 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 119 usage_00168.pdb 58 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 113 usage_00169.pdb 60 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 115 usage_00188.pdb 59 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00189.pdb 59 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00190.pdb 60 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 119 usage_00191.pdb 60 YV-----NSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00192.pdb 60 YV----KNSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 115 usage_00193.pdb 61 YV----KNSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 116 usage_00194.pdb 59 YVK-RDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 117 usage_00195.pdb 58 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 113 usage_00196.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00201.pdb 61 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 120 usage_00202.pdb 59 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00203.pdb 60 YV-----NSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00239.pdb 60 YVK-NDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00240.pdb 55 YVK--DINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 112 usage_00249.pdb 60 -Y----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00250.pdb 60 YVK--DINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 117 usage_00251.pdb 55 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 110 usage_00252.pdb 59 YV----INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 114 usage_00253.pdb 59 YVK--DINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 116 usage_00254.pdb 59 YVK--DINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 116 usage_00255.pdb 58 YVK--DINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 115 usage_00261.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00262.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 usage_00263.pdb 60 YVK---INSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 116 usage_00264.pdb 60 YVK-NRINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 118 v NSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV usage_00006.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 173 usage_00007.pdb 120 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-E 175 usage_00008.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 173 usage_00009.pdb 120 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 174 usage_00131.pdb 114 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 168 usage_00132.pdb 113 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 167 usage_00166.pdb 117 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-E 172 usage_00167.pdb 120 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-- 174 usage_00168.pdb 114 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSD--R-E 170 usage_00169.pdb 116 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-- 170 usage_00188.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 168 usage_00189.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 168 usage_00190.pdb 120 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-- 174 usage_00191.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 168 usage_00192.pdb 116 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 169 usage_00193.pdb 117 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 170 usage_00194.pdb 118 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 172 usage_00195.pdb 114 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS------ 167 usage_00196.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKY------- 171 usage_00201.pdb 121 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHR-E 179 usage_00202.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---DRE 171 usage_00203.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSD--R-E 171 usage_00239.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-- 173 usage_00240.pdb 113 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHR-E 171 usage_00249.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----D 169 usage_00250.pdb 118 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKY----R-E 172 usage_00251.pdb 111 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYDA--R-E 167 usage_00252.pdb 115 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 169 usage_00253.pdb 117 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---R-E 172 usage_00254.pdb 117 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---R-E 172 usage_00255.pdb 116 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---R-E 171 usage_00261.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 173 usage_00262.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS---D-- 173 usage_00263.pdb 117 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 171 usage_00264.pdb 119 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYS-----E 173 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKY usage_00006.pdb 174 IDVNNINVPEQPVIDINMINFGVYKNIVIHK------------------ 204 usage_00007.pdb 176 IDVNNINVPEQPVIDINMINFGVYKNIVIHK------------------ 206 usage_00008.pdb 174 IDVNNIN-PEQPVIDINMINFGVYKNIVIHK------------------ 203 usage_00009.pdb 175 IDVNNINVPEQPVIDINMINFGVYKNIVIHK------------------ 205 usage_00131.pdb 169 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 217 usage_00132.pdb 168 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 216 usage_00166.pdb 173 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 221 usage_00167.pdb ------------------------------------------------- usage_00168.pdb 171 IDVNNIN-V-QPVIDINMINFGVYKNI---------------------- 195 usage_00169.pdb ------------------------------------------------- usage_00188.pdb 169 IDVNNINVP-QPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 216 usage_00189.pdb 169 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 217 usage_00190.pdb 175 -------------------------A----------------------- 175 usage_00191.pdb 169 IDVNNINVP-QPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 216 usage_00192.pdb 170 IDVNNIN----PVIDINMINFGVYKNIVIHK------------------ 196 usage_00193.pdb 171 IDVNNIN----PVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 215 usage_00194.pdb 173 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 221 usage_00195.pdb 168 IDVNNIQ----PVIDINMINFGVYKNIVIHK------------------ 194 usage_00196.pdb 172 IDVNNIN----PVIDINMINFGVYKNIVIHK------------------ 198 usage_00201.pdb 180 IDVNNI-NVPQPVIDINMINFGVYKNIVIHK------------------ 209 usage_00202.pdb 172 IDVNNI-NVPQPVIDINMINFGVYKNIVIHK------------------ 201 usage_00203.pdb 172 IDVNNINVE-QPVIDINMINFGVYKNI---------------------- 197 usage_00239.pdb 174 -------------------------A----------------------- 174 usage_00240.pdb 172 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTA---------------- 204 usage_00249.pdb 170 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 218 usage_00250.pdb 173 IDVNNIN----PVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 217 usage_00251.pdb 168 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 216 usage_00252.pdb 170 IDVNNINVP--PVIDINMINFGVYKNIVIHKT----------------- 199 usage_00253.pdb 173 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 221 usage_00254.pdb 173 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 221 usage_00255.pdb 172 IDVNNINVPEQPVIDINMINFGVYKNIVIHKT----------------- 203 usage_00261.pdb 174 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 222 usage_00262.pdb ------------------------------------------------- usage_00263.pdb 172 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAG 220 usage_00264.pdb 174 IDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFF----------- 211 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################