################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:45 2021 # Report_file: c_0675_115.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00200.pdb # 4: usage_00201.pdb # 5: usage_00237.pdb # 6: usage_00374.pdb # 7: usage_00622.pdb # 8: usage_00670.pdb # 9: usage_00779.pdb # 10: usage_00780.pdb # 11: usage_00799.pdb # 12: usage_00800.pdb # 13: usage_00864.pdb # # Length: 61 # Identity: 13/ 61 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 61 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 61 ( 34.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 ---QVESGGGLVQAGGSLRLSCAASGYAYTYI--------YGWFRQAPGKEREGVAAD-- 47 usage_00037.pdb 1 ---QVESGGGLVQAGGSLRLSCAASGYAYTYI--------YGWFRQAPGKEREGVAAD-- 47 usage_00200.pdb 1 --ALLESGGGLVKPGGSLKLSCTASGITF--S----R-YIMSWVRQIPEKRLEWVASISS 51 usage_00201.pdb 1 --ALLESGGGLVKPGGSLKLSCTASGITF--S----R-YIMSWVRQIPEKRLEWVASISS 51 usage_00237.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGRT---G----STYDMGWFRQAPGKERESVA---- 47 usage_00374.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI--S--RGS-HYWGWIRQPPGKGLEWIGSIYY 53 usage_00622.pdb 1 EVQLVESGGKLVQPGGSLRLSCEASGESV--G----D-NDMHWVRQVAGKGLEW------ 47 usage_00670.pdb 1 ---LQESGPGLVKPSETLSLTCNVSGTLV--R----D-NYWSWIRQPLGKQPEWIGYVHD 50 usage_00779.pdb 1 --KLLESGGGLVQPGGSLKLSCAASGFSL--S--TSG-VGVGWFRQPSGKGLEWLALI-- 51 usage_00780.pdb 1 --KLLESGGGLVQPGGSLKLSCAASGFSL--S--TSG-VGVGWFRQPSGKGLEWLALI-- 51 usage_00799.pdb 1 -VKLEESGGGLVQPGGSMKLSCTASGFTF--S----D-AWMDWVRQSPEKGLEW------ 46 usage_00800.pdb 1 -VKLEESGGGLVQPGGSMKLSCTASGFTF--S----D-AWMDWVRQSPEKGLEW------ 46 usage_00864.pdb 1 --SLEESGGGPVKPGGTLTLTCKASGID---FSS--F-YYMCWVRQAPGKGLEWIACIVT 52 ESG glV L C SG W RQ K E usage_00036.pdb - usage_00037.pdb - usage_00200.pdb - usage_00201.pdb - usage_00237.pdb - usage_00374.pdb - usage_00622.pdb - usage_00670.pdb - usage_00779.pdb - usage_00780.pdb - usage_00799.pdb - usage_00800.pdb - usage_00864.pdb 53 D 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################