################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:21 2021 # Report_file: c_0417_9.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00069.pdb # 4: usage_00070.pdb # 5: usage_00071.pdb # 6: usage_00072.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # 9: usage_00075.pdb # 10: usage_00076.pdb # 11: usage_00151.pdb # 12: usage_00152.pdb # # Length: 75 # Identity: 52/ 75 ( 69.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 75 ( 69.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 75 ( 30.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 ---VIRYIDIKFYRS----ESKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 53 usage_00034.pdb 1 --KVIRYIDIKFYRSVGKTESKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 58 usage_00069.pdb 1 ---VIRYIDIKFY-------SKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 50 usage_00070.pdb 1 ---------------------KPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 39 usage_00071.pdb 1 ---VIRYIDIKF--------Y-PVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 48 usage_00072.pdb 1 ---------------------KPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 39 usage_00073.pdb 1 ---------------------KPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 39 usage_00074.pdb 1 ---VIRYIDIKF--------SKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 49 usage_00075.pdb 1 ---VIRYIDIKF--------SKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 49 usage_00076.pdb 1 ---------------------KPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 39 usage_00151.pdb 1 ---VIRYIDIKFYR-----ESKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 52 usage_00152.pdb 1 DLKVIRYIDIKFYRSVGKTESKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM 60 PVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITM usage_00033.pdb 54 FNPAKVMTAALYLKP 68 usage_00034.pdb 59 FNPAKVMTAALYLKP 73 usage_00069.pdb 51 FNPAKVMTAALYLKP 65 usage_00070.pdb 40 FNPAKVMTAALYLKP 54 usage_00071.pdb 49 FNPAKVMTAALYLKP 63 usage_00072.pdb 40 FNPAKVMTAALYLKP 54 usage_00073.pdb 40 FNPAKVMTAALYLKP 54 usage_00074.pdb 50 FNPAKVMTAALYLKP 64 usage_00075.pdb 50 FNPAKVMTAALYLKP 64 usage_00076.pdb 40 FNPAKVMTAALYLKP 54 usage_00151.pdb 53 FNPAKVMTAALYLKP 67 usage_00152.pdb 61 FNPAKVMTAALYLK- 74 FNPAKVMTAALYLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################