################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:42 2021 # Report_file: c_0773_109.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00094.pdb # 2: usage_00457.pdb # 3: usage_00458.pdb # 4: usage_00761.pdb # 5: usage_00802.pdb # 6: usage_00803.pdb # 7: usage_00804.pdb # 8: usage_00883.pdb # # Length: 83 # Identity: 4/ 83 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 83 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 83 ( 39.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 -SILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHA 59 usage_00457.pdb 1 KRLTIIGGGIIGLEMGSVYSRLG-------------SKVTVVEFQPQIGASMDGEVAKAT 47 usage_00458.pdb 1 KRLTIIGGGIIGLEMGSVYSRLG-------------SKVTVVEFQPQIGASMDGEVAKAT 47 usage_00761.pdb 1 KRLGVIGAGVIGLELGSVWARLG-------------AEVTVLEALDTFLMAADTAVSKEA 47 usage_00802.pdb 1 -KLVVIGAGYIGLEMGSVWGRIG-------------SEVTVVEFASEIVPTMDAEIRKQF 46 usage_00803.pdb 1 -KLVVIGAGYIGLEMGSVWGRIG-------------SEVTVVEFASEIVPTMDAEIRKQF 46 usage_00804.pdb 1 -KLVVIGAGYIGLEMGSVWGRIG-------------SEVTVVEFASEIVPTMDAEIRKQF 46 usage_00883.pdb 1 -IVSILGAGAMGSALSVPLVDNG-------------NEVRIWGTE--FDTE----ILKSI 40 G G G e g vt e k usage_00094.pdb 60 VSYLE---------DRGVEFKIA 73 usage_00457.pdb 48 QKFLK---------KQGLDFK-- 59 usage_00458.pdb 48 QKFLK---------KQGLDFK-- 59 usage_00761.pdb 48 QKTLT---------KQGLDIKLG 61 usage_00802.pdb 47 QRSLE---------KQGMKFKL- 59 usage_00803.pdb 47 QRSLE---------KQGMKFKL- 59 usage_00804.pdb 47 QRSLE---------KQGMKFK-- 58 usage_00883.pdb 41 SAG--REHPRLGVKLNGVEIFW- 60 G k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################