################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:40 2021 # Report_file: c_1442_67.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_02223.pdb # 2: usage_04385.pdb # 3: usage_10011.pdb # 4: usage_10012.pdb # 5: usage_10013.pdb # 6: usage_10014.pdb # 7: usage_11153.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 48 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 48 ( 47.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02223.pdb 1 --SLFWMNVKAIPSM--LT------ENTLQLAIISRIKLYYRPAK--- 35 usage_04385.pdb 1 --SLFYFNLREIPPR--------------QIALQTKIKLFYRP----- 27 usage_10011.pdb 1 RESLFWMNVKAIPSMDKSK---L-TENTLQLAIISRIKLYYRP----- 39 usage_10012.pdb 1 RESLFWMNVKAIPSMDKSK---L-TENTLQLAIISRIKLYYRP----- 39 usage_10013.pdb 1 RESLFWMNVKAIPSMDKSK---L-TENTLQLAIISRIKLYYRP----- 39 usage_10014.pdb 1 RESLFWMNVKAIPSMDKSK---L-TENTLQLAIISRIKLYYRP----- 39 usage_11153.pdb 1 ----VKFDLQIQSSN----LFDKVSPVVSHKVDLAVLAAVEIR--GVS 38 f n ips q a ikl yrp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################