################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:36 2021 # Report_file: c_0854_3.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00004.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00032.pdb # 5: usage_00079.pdb # # Length: 86 # Identity: 59/ 86 ( 68.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 86 ( 73.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 86 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 60 usage_00017.pdb 1 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 60 usage_00018.pdb 1 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 60 usage_00032.pdb 1 LKSYLRSLRP-------LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 53 usage_00079.pdb 1 LKSYLRSLRPE----V-LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 55 LKSYLRSLRP PP L MIQMA EIADGMAYLNA KFVHRDLAARNCMVA D usage_00004.pdb 61 FTVKIGDFGMTRDIETDRKGG----- 81 usage_00017.pdb 61 FTVKIGDFGMTRDIETDRKGG----- 81 usage_00018.pdb 61 FTVKIGDFGMTRDIETDRKGG----- 81 usage_00032.pdb 54 FTVKIGDFGMTRDIETDRKGG----- 74 usage_00079.pdb 56 FTVKIGDFGMTRDIYETD---YYRKG 78 FTVKIGDFGMTRDIetdr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################