################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:39 2021 # Report_file: c_0904_28.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00235.pdb # 2: usage_00236.pdb # 3: usage_00237.pdb # 4: usage_00238.pdb # 5: usage_00240.pdb # 6: usage_00247.pdb # 7: usage_00257.pdb # 8: usage_00307.pdb # 9: usage_00416.pdb # 10: usage_00578.pdb # 11: usage_00579.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 55 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 55 ( 43.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00235.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRFLG 44 usage_00236.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRF-- 42 usage_00237.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRFLG 44 usage_00238.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRFLG 44 usage_00240.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRF-- 42 usage_00247.pdb 1 --LIEV--R-QNGEIRRGQVLEVQED----KA-VQIFEGTSGINL-KNSSVRF-- 42 usage_00257.pdb 1 GAIVDI-KD-GTGRVRGGQVIEVSEE----YAVIQVFEETTGLDL-ATTSVS--- 45 usage_00307.pdb 1 ----LVKVG---HDNLVGEVIRIDGD----KATIQVYEETAGLTV-GDPV-LR-- 40 usage_00416.pdb 1 --NVTV--K-HNGVPS--TSPTVTY-DSNLKV-AIITD--IDLLLGEAYTVEWA- 43 usage_00578.pdb 1 --LIEV--RMQNGEIRRGQVLEVQED----KAMVQIFEGTSGINL-KNSSVRF-- 44 usage_00579.pdb 1 --LIEV-RM-QNGEIRRGQVLEVQED----KAMVQIFEGTSGINL-KNSSVRF-- 44 v g v v ka q e g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################