################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:24:36 2021 # Report_file: c_0862_39.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00106.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00111.pdb # 5: usage_00112.pdb # 6: usage_00113.pdb # 7: usage_00114.pdb # 8: usage_00115.pdb # 9: usage_00116.pdb # 10: usage_00117.pdb # 11: usage_00118.pdb # 12: usage_00119.pdb # 13: usage_00213.pdb # 14: usage_00214.pdb # 15: usage_00215.pdb # 16: usage_00216.pdb # 17: usage_00217.pdb # 18: usage_00222.pdb # 19: usage_00223.pdb # 20: usage_00224.pdb # 21: usage_00353.pdb # 22: usage_00354.pdb # 23: usage_00355.pdb # 24: usage_00356.pdb # 25: usage_00377.pdb # 26: usage_00392.pdb # # Length: 84 # Identity: 47/ 84 ( 56.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/ 84 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 84 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00109.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00110.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00111.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00112.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00113.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00114.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00115.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00116.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00117.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00118.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00119.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00213.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00214.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00215.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00216.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00217.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00222.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00223.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00224.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00353.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00354.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00355.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00356.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE-----RRI 55 usage_00377.pdb 1 -GPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVE-----RRV 54 usage_00392.pdb 1 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-----HGEVERRI 55 GPEIMSKlaGeSEsnLRkaFeeAEknAPaIIFIDElDaIAPKREkt RRi usage_00106.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00109.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00110.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00111.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00112.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00113.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00114.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00115.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00116.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00117.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00118.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00119.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00213.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00214.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00215.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00216.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00217.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00222.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00223.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 usage_00224.pdb 56 VSQLLTLMDGLKQRAHVIVMAATN 79 usage_00353.pdb 56 VSQLLTLMDGLKQRAHVIVMA--- 76 usage_00354.pdb 56 VSQLLTLMDGLKQRAHVIVMA--- 76 usage_00355.pdb 56 VSQLLTLMDGLKQRAHVIVMA--- 76 usage_00356.pdb 56 VSQLLTLMDGLKQRAHVIVMA--- 76 usage_00377.pdb 55 VAQLLTLMDGMKERGHVIVIGATN 78 usage_00392.pdb 56 VSQLLTLMDGLKQRAHVIVMAAT- 78 VsQLLTLMDGlKqRaHVIVma #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################