################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:08 2021 # Report_file: c_0103_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # 12: usage_00065.pdb # 13: usage_00071.pdb # # Length: 190 # Identity: 138/190 ( 72.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 138/190 ( 72.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/190 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 PFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLGAPAYGVKSTL 60 usage_00038.pdb 1 -----------------------PKTQMQNYA--------------GPLGAPAYGVKSTL 23 usage_00056.pdb 1 -----------------------PKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 37 usage_00057.pdb 1 -----------------------PKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 37 usage_00058.pdb 1 --------------------------QMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 34 usage_00059.pdb 1 PFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 60 usage_00060.pdb 1 PFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 60 usage_00061.pdb 1 --------------------------QMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 34 usage_00062.pdb 1 -----------------------PKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 37 usage_00063.pdb 1 ---------IFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 51 usage_00064.pdb 1 PFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 60 usage_00065.pdb 1 -----------------------PKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 37 usage_00071.pdb 1 -----------------------AKTQMQNYAFGYNQENQPIRVNPGPLDAPAYGVKSTL 37 QMQNYA GPL APAYGVKSTL usage_00037.pdb 61 PDMLSFIHANLNPQKYPADIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 120 usage_00038.pdb 24 PDMLSFIHANLNPQKYPADIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 83 usage_00056.pdb 38 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 97 usage_00057.pdb 38 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 97 usage_00058.pdb 35 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 94 usage_00059.pdb 61 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 120 usage_00060.pdb 61 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 120 usage_00061.pdb 35 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 94 usage_00062.pdb 38 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 97 usage_00063.pdb 52 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 111 usage_00064.pdb 61 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 120 usage_00065.pdb 38 PDMLSFIHANLNPQKYPTDIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 97 usage_00071.pdb 38 PDMLSFIHANLNPQKYPADIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS 97 PDMLSFIHANLNPQKYP DIQRAINETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNS usage_00037.pdb 121 EQIVMKPNKVTAISKEPSVKMYHKTG--NRFGTYVVFIPKENIGLVMLTNKRIPNEERIK 178 usage_00038.pdb 84 EQIVMKPNKVTAISKEPSVKMYHKTGSTNRFGTYVVFIPKENIGLVMLTNKRIPNEERIK 143 usage_00056.pdb 98 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 157 usage_00057.pdb 98 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 157 usage_00058.pdb 95 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 154 usage_00059.pdb 121 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 180 usage_00060.pdb 121 EQIVMKPNKVTAI---PSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 177 usage_00061.pdb 95 EQIVMKPNKVTAI--EPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 152 usage_00062.pdb 98 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 157 usage_00063.pdb 112 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 171 usage_00064.pdb 121 EQIVMKPNKVTAISKEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 180 usage_00065.pdb 98 EQIVMKPNKVTAI--EPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 155 usage_00071.pdb 98 EQIVMKPNKVTAISKEPSVKMYHKTGSTNGFGTYVVFIPKENIGLVMLTNKRIPNEERIK 157 EQIVMKPNKVTAI PSVKMYHKTG FGTYVVFIPKENIGLVMLTNKRIPNEERIK usage_00037.pdb 179 AAYAVLNAI- 187 usage_00038.pdb 144 AAYAVLNAI- 152 usage_00056.pdb 158 AAYVVLNAI- 166 usage_00057.pdb 158 AAYVVLNAI- 166 usage_00058.pdb 155 AAYVVLNAI- 163 usage_00059.pdb 181 AAYVVLNAI- 189 usage_00060.pdb 178 AAYVVLNA-- 185 usage_00061.pdb 153 AAYVVLNA-- 160 usage_00062.pdb 158 AAYVVLNAI- 166 usage_00063.pdb 172 AAYVVLNAI- 180 usage_00064.pdb 181 AAYVVLNA-- 188 usage_00065.pdb 156 AAYVVLNA-- 163 usage_00071.pdb 158 AAYAVLNAIK 167 AAY VLNA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################