################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:40 2021 # Report_file: c_0083_27.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00037.pdb # 2: usage_00398.pdb # 3: usage_00402.pdb # 4: usage_00403.pdb # 5: usage_00417.pdb # 6: usage_00418.pdb # # Length: 350 # Identity: 62/350 ( 17.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/350 ( 34.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 227/350 ( 64.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 -------------------------------------------------------NQWPE 5 usage_00398.pdb 1 ---------------------------------------------------------WPE 3 usage_00402.pdb ------------------------------------------------------------ usage_00403.pdb ------------------------------------------------------------ usage_00417.pdb 1 DPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPVSQWPE 60 usage_00418.pdb 1 DPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPVSQWPE 60 usage_00037.pdb 6 LMHALVRNASE--GGQHQKQASLTAIGFICETQDTDLRNSLVGHSNAILTAVVQGARKEE 63 usage_00398.pdb 4 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDI---DPEQLQDKSNEILTAIIQGMRKEE 60 usage_00402.pdb 1 ---------------------------------------------NEILTAIIQGMRKEE 15 usage_00403.pdb 1 ---------------------------------------------NEILTAIIQGMRKEE 15 usage_00417.pdb 61 LIPQLVANVTNPNSTE-HKESTLEAIGYICQDI---DPEQLQDKSNEILTAIIQG-RKEE 115 usage_00418.pdb 61 LIPQLVANVTNPNSTE-HKESTLEAIGYICQDI---DPEQLQDKSNEILTAIIQG-RKEE 115 NeILTAiiQG RKEE usage_00037.pdb 64 PNNEVRFAAITALGDSLEFVGNNFKHEGERNYIMQVVCEATQAQDSRIQQGAFGCLNRIM 123 usage_00398.pdb 61 PSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 120 usage_00402.pdb 16 PSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 75 usage_00403.pdb 16 PSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 75 usage_00417.pdb 116 PSNNVKLAATNALLNSLEFTKANFDKESERHFI-QVVCEATQCPDTRVRVAALQNLVKIS 174 usage_00418.pdb 116 PSNNVKLAATNALLNSLEFTKANFDKESERHFI-QVVCEATQCPDTRVRVAALQNLVKIS 174 PsNnVklAAtnALlnSLEFtkaNFdkEsERhfI QVVCEATQcpDtRvrvaAlqnLvkI usage_00037.pdb 124 ALYYEH-MRYYMEKALFGLTILGMKSDDEDVAKLAVEFWSTVCEEEIAIEDDNAQV---E 179 usage_00398.pdb 121 SLYYQY-METYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQG 179 usage_00402.pdb 76 SLYYQY-METYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQG 134 usage_00403.pdb 76 SLYYQY-METYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQG 134 usage_00417.pdb 175 -LYYQYE--T-YGPALFAITIEA-KSDIDEVALQGIEFWSNVCDEED-LAIEASEAAEQG 228 usage_00418.pdb 175 -LYYQYE--T-YGPALFAITIEA-KSDIDEVALQGIEFWSNVCDEED-LAIEASEAAEQG 228 LYYqy t gpALFaiTIea KSDideVAlqgiEFWSnVCdEE laieasea g usage_00037.pdb 180 SSE---QMRPFYNFARVATNEVVPVLLQLLTKQDEDASDDEYNISRAAYQCLQLYAQA-- 234 usage_00398.pdb 180 ---RPPE-HTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE 235 usage_00402.pdb 135 ---RPPE-HTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE 190 usage_00403.pdb 135 ---RPPE-HTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE 190 usage_00417.pdb ------------------------------------------------------------ usage_00418.pdb ------------------------------------------------------------ usage_00037.pdb -------------------------------------------------- usage_00398.pdb -------------------------------------------------- usage_00402.pdb 191 DDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQA- 239 usage_00403.pdb 191 DDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAM 240 usage_00417.pdb -------------------------------------------------- usage_00418.pdb -------------------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################