################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:17 2021 # Report_file: c_0396_24.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00145.pdb # 2: usage_00253.pdb # 3: usage_00571.pdb # 4: usage_00593.pdb # # Length: 80 # Identity: 22/ 80 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 80 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 80 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 -----LH-FQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPE 54 usage_00253.pdb 1 GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSE 60 usage_00571.pdb 1 GVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPP 60 usage_00593.pdb 1 GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSE 60 LH q p Q K v G fDV VD R SpTfG w v L d rr e usage_00145.pdb 55 GFAHGFLALSDECIVNYKCT 74 usage_00253.pdb 61 GLAHGFLALQDNSTVMYL-- 78 usage_00571.pdb 61 GFAHGFQALEDSIVIYFITH 80 usage_00593.pdb 61 GLAHGFLALQDNSTVMYL-- 78 G AHGFlAL D v y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################