################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:28 2021 # Report_file: c_0328_53.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00217.pdb # 4: usage_00286.pdb # 5: usage_00302.pdb # 6: usage_00303.pdb # 7: usage_00304.pdb # 8: usage_00490.pdb # # Length: 197 # Identity: 147/197 ( 74.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/197 ( 75.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/197 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 --NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 58 usage_00123.pdb 1 --NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 58 usage_00217.pdb 1 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 60 usage_00286.pdb 1 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 60 usage_00302.pdb 1 ---EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 57 usage_00303.pdb 1 -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 59 usage_00304.pdb 1 -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 59 usage_00490.pdb 1 -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA 59 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA usage_00122.pdb 59 AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQGFFGVDRSDRDPQHARAAFSDFSK 117 usage_00123.pdb 59 AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQGFFGVDRSDRDPQHARAAFSDFSK 117 usage_00217.pdb 61 AIDRFIRLNPTHPNIDYVMYMRGLTNMALDD-----------SSDRDPQHARAAFSDFSK 109 usage_00286.pdb 61 AIDRFIRLNPTHPNIDYVMYMRGLTNMALD-D--------------DPQQARAAFSDFSK 105 usage_00302.pdb 58 AIDRFIRLNPTHPNIDYVMYMRGLTNMALDD-----------SSDRDPQHARAAFSDFSK 106 usage_00303.pdb 60 AIDRFIRLNPTHPNIDYV-Y-RGLTNA-LDDSALQGFFG-VDRSDRDPQHARAAFSDFSK 115 usage_00304.pdb 60 AIDRFIRLNPTHPNIDYV-Y-RGLTNA-LDDSALQGFFG-VDRSDRDPQHARAAFSDFSK 115 usage_00490.pdb 60 AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-------------RDPQHARAAFSDFSK 106 AIDRFIRLNPTHPNIDYV Y RGLTN LD DPQhARAAFSDFSK usage_00122.pdb 118 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 177 usage_00123.pdb 118 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 177 usage_00217.pdb 110 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT- 168 usage_00286.pdb 106 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 165 usage_00302.pdb 107 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT- 165 usage_00303.pdb 116 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGLRDYPDTQA 175 usage_00304.pdb 116 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGLRDYPDTQA 175 usage_00490.pdb 107 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 166 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEG usage_00122.pdb 178 ATRDALPLMENAYRQMQ 194 usage_00123.pdb 178 ATRDALPLMENAYRQMQ 194 usage_00217.pdb ----------------- usage_00286.pdb 166 ATRDALPLMENAYRQMQ 182 usage_00302.pdb ----------------- usage_00303.pdb 176 TRDALPL-E-NAYRQQ- 189 usage_00304.pdb 176 TRDALPL-E-NAYRQQ- 189 usage_00490.pdb 167 ATRDALPLMENAYRQMQ 183 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################