################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:01 2021 # Report_file: c_0225_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00016.pdb # 13: usage_00030.pdb # # Length: 125 # Identity: 43/125 ( 34.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/125 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/125 ( 11.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00002.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00003.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00004.pdb 1 -----VKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 53 usage_00005.pdb 1 -----VKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 53 usage_00006.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00007.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00008.pdb 1 -----VKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 53 usage_00009.pdb 1 -----VKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 53 usage_00010.pdb 1 GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 58 usage_00011.pdb 1 -----VKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVN-GT 53 usage_00016.pdb 1 -----SKMHGLGNDFVVVDGVTQ--NVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPEL 53 usage_00030.pdb 1 -----SKMHGLGNDFVVVDGVTQ--NVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPEL 53 K HGLGNDF VD T E L R G G D usage_00001.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00002.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00003.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00004.pdb 54 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 112 usage_00005.pdb 54 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 112 usage_00006.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00007.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00008.pdb 54 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 112 usage_00009.pdb 54 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 112 usage_00010.pdb 59 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 117 usage_00011.pdb 54 DYAMRIFNSDGSEPEMCGNGVRCFARFIAELE-NLQGKHSFTIHTGAGLIVPEIQDDGQV 112 usage_00016.pdb 54 DFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNK--KDISVSTQKGNMVLTVKDDNQI 111 usage_00030.pdb 54 DFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNK--KDISVSTQKGNMVLTVKDDNQI 111 D RIFN DGSE CGNG RCFARF T G V DD Q usage_00001.pdb 118 KVD-- 120 usage_00002.pdb 118 KVD-- 120 usage_00003.pdb 118 KVD-- 120 usage_00004.pdb 113 KVD-- 115 usage_00005.pdb 113 KVDMG 117 usage_00006.pdb 118 KVD-- 120 usage_00007.pdb 118 KVD-- 120 usage_00008.pdb 113 KVD-- 115 usage_00009.pdb 113 KVDMG 117 usage_00010.pdb 118 KVDMG 122 usage_00011.pdb 113 KVDMG 117 usage_00016.pdb 112 RVN-- 114 usage_00030.pdb 112 RVN-- 114 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################