################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:39 2021 # Report_file: c_1297_385.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00132.pdb # 2: usage_01613.pdb # 3: usage_02121.pdb # 4: usage_02122.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 74 ( 2.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 74 ( 77.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 ------MIGLAKRSQ----DSP-L-KL-EDFI---PMDSTV---KNYFITD-----A--- 33 usage_01613.pdb 1 ------GVASFAKALAEGEDLLYE-KP-FLI----RG----THGEVEVEVG----FL-HT 39 usage_02121.pdb 1 NLRDLQEGIKELTKRYQ--DQGY-VL-ANV--VGAPQ----VSE-------NGVVT-LQV 42 usage_02122.pdb 1 NLRDLQEGIKELTKRYQ--DQGY-VL-ANV--VGAPQ----VSE-------NGVVT-LQ- 41 D p usage_00132.pdb -------------- usage_01613.pdb 40 Q------------- 40 usage_02121.pdb 43 AEGVVENISVRFRN 56 usage_02122.pdb -------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################