################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:29 2021 # Report_file: c_0941_134.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00289.pdb # 2: usage_00717.pdb # 3: usage_00718.pdb # 4: usage_00791.pdb # 5: usage_00792.pdb # 6: usage_01131.pdb # 7: usage_01571.pdb # 8: usage_01572.pdb # # Length: 60 # Identity: 1/ 60 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 60 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 60 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00289.pdb 1 --AMFQIGKMRYVSVRDFKGKVLIDIREYWMDP---------EGEMKPG--RKGISLN-- 45 usage_00717.pdb 1 --VEIGTPSY-AIIITRTNMGYLVEVQE-----PDKSAMDIR-------HPGPVKFSLLH 45 usage_00718.pdb 1 --VEIGTPSY-AIIITRTNMGYLVEVQE-----PDKSAMRHP---------GPVKFSLLH 43 usage_00791.pdb 1 SSIEIGTQNH-TIIITRTNMGFLVELQE-----PDKSAMNRM-------KPGPAKFSLLH 47 usage_00792.pdb 1 SSIEIGTQNH-TIIITRTNMGFLVELQE-----PDKSAMNRM-------KPGPAKFSLLH 47 usage_01131.pdb 1 --IEIKLTGQ-QIIITRVNMGFLVEVRR----IS-----------------ESVVFGLVA 36 usage_01571.pdb 1 --IEIGTSTH-TIIITRTNMGFLVEVQE-------------------------VKFSLLH 32 usage_01572.pdb 1 --IEIGTSTH-TIIITRTNMGFLVEVQE------------------------PVKFSLLH 33 ei iiitr nmg Lve e f l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################