################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:30 2021 # Report_file: c_1097_15.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00032.pdb # 2: usage_00033.pdb # 3: usage_00037.pdb # 4: usage_00038.pdb # 5: usage_00083.pdb # 6: usage_00121.pdb # 7: usage_00220.pdb # 8: usage_00274.pdb # 9: usage_00353.pdb # 10: usage_00389.pdb # 11: usage_00396.pdb # 12: usage_00397.pdb # 13: usage_00398.pdb # 14: usage_00400.pdb # 15: usage_00401.pdb # 16: usage_00402.pdb # 17: usage_00403.pdb # 18: usage_00405.pdb # 19: usage_00406.pdb # 20: usage_00501.pdb # # Length: 89 # Identity: 44/ 89 ( 49.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 89 ( 69.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 89 ( 30.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00033.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00037.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00038.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00083.pdb 1 -KELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00121.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00220.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00274.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00353.pdb 1 ------YLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 54 usage_00389.pdb 1 ------YLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 54 usage_00396.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00397.pdb 1 PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 60 usage_00398.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00400.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00401.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00402.pdb 1 -------------------------LRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 35 usage_00403.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00405.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00406.pdb 1 -KEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK 59 usage_00501.pdb 1 --------------VASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEK 46 LRLVVsIAkkYtgRGLsfLDLIqEGNqGLIRAVEK usage_00032.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIADQA 89 usage_00033.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIADQA 89 usage_00037.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIAD-- 87 usage_00038.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIAD-- 87 usage_00083.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIADQA 88 usage_00121.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIAD-- 87 usage_00220.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIAD-- 87 usage_00274.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIADQA 89 usage_00353.pdb 55 FEYKRRFKFSTYATWWIRQAINRAIAD-- 81 usage_00389.pdb 55 FEYKRRFKFSTYATWWIRQAINRAIAD-- 81 usage_00396.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIADQA 89 usage_00397.pdb 61 FEYKRRFKFSTYATWWIRQAINRAIAD-- 87 usage_00398.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00400.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00401.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00402.pdb 36 FEYKRRFKFSTYATWWIRQAINRAIAD-- 62 usage_00403.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00405.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00406.pdb 60 FEYKRRFKFSTYATWWIRQAINRAIAD-- 86 usage_00501.pdb 47 FDPERGFRFSTYATWWIRQTIERAIMN-- 73 FeykRrFkFSTYATWWIRQaInRAIad #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################