################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:04 2021 # Report_file: c_1402_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00154.pdb # 2: usage_00291.pdb # 3: usage_00404.pdb # 4: usage_00567.pdb # 5: usage_00710.pdb # 6: usage_00757.pdb # 7: usage_00870.pdb # 8: usage_00997.pdb # 9: usage_01047.pdb # # Length: 105 # Identity: 26/105 ( 24.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/105 ( 24.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/105 ( 70.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00154.pdb 1 ----------------------------------------LKEHKALKTLGIIMGTFTLC 20 usage_00291.pdb 1 ------------------------------------------EHKALKTLGIIMGTFTLC 18 usage_00404.pdb 1 -NRAYAIASSIISFYIPLLIMIFVALRVYREAKEQSRVMLMREHKALKTLGIIMGVFTLC 59 usage_00567.pdb 1 ----------------------------------------LKEHKALKTLGIIMGTFTLC 20 usage_00710.pdb 1 ----------------------------------------LKEHKALKTLGIIMGTFTLC 20 usage_00757.pdb 1 -------------------------------------------HKALKTLGIIMGTFTLC 17 usage_00870.pdb 1 --------------------------------------FALKEHKALKTLGIIMGTFTLC 22 usage_00997.pdb 1 R----------------------------------KRVMLMREHKALKTLGIIMGVFTLC 26 usage_01047.pdb 1 ----------------------------------------LKEHKALKTLGIIMGTFTLC 20 HKALKTLGIIMG FTLC usage_00154.pdb 21 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-IY--- 61 usage_00291.pdb 19 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC--- 60 usage_00404.pdb 60 WLPFFLVNIVNVFN------------------------------- 73 usage_00567.pdb 21 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-IYCRS 64 usage_00710.pdb 21 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-IY--- 61 usage_00757.pdb 18 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-I---- 57 usage_00870.pdb 23 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-IY--- 63 usage_00997.pdb 27 WLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPI-IY--- 67 usage_01047.pdb 21 WLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL-IY--- 61 WLPFF VNIV V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################