################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:06 2021 # Report_file: c_1307_2.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00343.pdb # 2: usage_00344.pdb # 3: usage_00610.pdb # 4: usage_00901.pdb # 5: usage_01542.pdb # 6: usage_01543.pdb # 7: usage_01639.pdb # 8: usage_01751.pdb # 9: usage_02067.pdb # 10: usage_02258.pdb # 11: usage_02506.pdb # 12: usage_02657.pdb # 13: usage_02658.pdb # # Length: 68 # Identity: 44/ 68 ( 64.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 68 ( 66.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 68 ( 32.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00343.pdb 1 -KKVFEAAVASIKAASSTEKFPDGFW---LGEQLVCWQAGTTPWNIFPVISLYLMGEVTN 56 usage_00344.pdb 1 -KKVFEAAVASIKAASSTEKFPDGFW---LGEQLVCWQ-A--PWNIFPVISLYLMGEVTN 53 usage_00610.pdb 1 PKKVFEAAVKSIKAASSTEKFPDGFWTPW---------------NIFPVISLYLMGEVTN 45 usage_00901.pdb 1 -KKVFEAAVKSIKAA-E--KFPDGFW---LGEQLVCWQ-A----NIFPVISLYLMGEVTN 48 usage_01542.pdb 1 PKKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVC--------NIFPVISLYLMGEVTN 49 usage_01543.pdb 1 PKKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVC--------NIFPVISLYLMGEVTN 49 usage_01639.pdb 1 PKKVFEAAVASIKAASSTEKFPDGFW---LGEQLVCWQAGTTPWNIFPVISLYLMGEVTN 57 usage_01751.pdb 1 -KKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVCWQ-----WNIFPVISLYLMGEVTN 51 usage_02067.pdb 1 -KKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVCWQAGTTPWNIFPVISLYLMGEVTN 56 usage_02258.pdb 1 -KKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVCW-----PWNIFPVISLYLMGEVTN 51 usage_02506.pdb 1 -KKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVCWQ---TPWNIFPVISLYLMGEVTN 53 usage_02657.pdb 1 PKKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVC--------NIFPVISLYLMGEVTN 49 usage_02658.pdb 1 PKKVFEAAVKSIKAASSTEKFPDGFW---LGEQLVC--------NIFPVISLYLMGEVTN 49 KKVFEAAV SIKAA s KFPDGFW NIFPVISLYLMGEVTN usage_00343.pdb 57 QSFRITIL 64 usage_00344.pdb 54 QSFRITIL 61 usage_00610.pdb 46 QSFRITIL 53 usage_00901.pdb 49 QSFRITIL 56 usage_01542.pdb 50 QSFRITIL 57 usage_01543.pdb 50 QSFRITIL 57 usage_01639.pdb 58 QSFRITIL 65 usage_01751.pdb 52 QSFRITIL 59 usage_02067.pdb 57 QSFRITIL 64 usage_02258.pdb 52 QSFRITIL 59 usage_02506.pdb 54 QSFRITIL 61 usage_02657.pdb 50 QSFRITIL 57 usage_02658.pdb 50 QSFRITIL 57 QSFRITIL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################