################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:16 2021 # Report_file: c_0929_32.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00879.pdb # 2: usage_00982.pdb # 3: usage_00983.pdb # 4: usage_00984.pdb # # Length: 72 # Identity: 28/ 72 ( 38.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 72 ( 93.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 72 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00879.pdb 1 LGFGMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTV 60 usage_00982.pdb 1 LGAGIGIEFRESSLLVNAKNPRVLQAG-TLNLSIGFGNLINPHPKNSQSKEYALLLIDTI 59 usage_00983.pdb 1 LGAGIGIEFRESSLLVNAKNPRVLQAG-TLNLSIGFGNLINPHP---QSKEYALLLIDTI 56 usage_00984.pdb 1 LGAGIGIEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTI 60 LGaGiGIEFREsSLlvNaKNprvLqaG tlnlsiGFgnLiNphp qsKeYALlliDTi usage_00879.pdb 61 LVDEDGPATVLT 72 usage_00982.pdb 60 QITRSDPIVF-T 70 usage_00983.pdb 57 QITRSDPIVF-T 67 usage_00984.pdb 61 QITRSDPIVF-T 71 qitrsdPivf T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################