################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:21:51 2021 # Report_file: c_0417_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00060.pdb # 5: usage_00061.pdb # 6: usage_00062.pdb # 7: usage_00063.pdb # 8: usage_00065.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00068.pdb # 12: usage_00139.pdb # 13: usage_00140.pdb # 14: usage_00141.pdb # 15: usage_00142.pdb # # Length: 72 # Identity: 56/ 72 ( 77.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 72 ( 77.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 72 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00008.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00009.pdb 1 VRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 60 usage_00060.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00061.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00062.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00063.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00065.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00066.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00067.pdb 1 ---------------EPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 45 usage_00068.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00139.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00140.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00141.pdb 1 -RIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 59 usage_00142.pdb 1 VRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE 60 EPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE usage_00007.pdb 60 ERIIFVNILAA- 70 usage_00008.pdb 60 ERIIFVNILAA- 70 usage_00009.pdb 61 ERIIFVNILAA- 71 usage_00060.pdb 60 ERIIFVNILAAP 71 usage_00061.pdb 60 ERIIFVNILAA- 70 usage_00062.pdb 60 ERIIFVNILAA- 70 usage_00063.pdb 60 ERIIFVNILAA- 70 usage_00065.pdb 60 ERIIFVNILAA- 70 usage_00066.pdb 60 ERIIFVNILAA- 70 usage_00067.pdb 46 ERIIFVNILAA- 56 usage_00068.pdb 60 ERIIFVNILAAP 71 usage_00139.pdb 60 ERIIFVNILAA- 70 usage_00140.pdb 60 ERIIFVNILAA- 70 usage_00141.pdb 60 ERIIFVNILAA- 70 usage_00142.pdb 61 ERIIFVNILAAP 72 ERIIFVNILAA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################