################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:35 2021 # Report_file: c_0325_9.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00087.pdb # 2: usage_00096.pdb # 3: usage_00099.pdb # 4: usage_00100.pdb # 5: usage_00239.pdb # # Length: 129 # Identity: 119/129 ( 92.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 127/129 ( 98.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/129 ( 1.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 RLKNCCLIATQLLGLTAPEMTVLIGGLRVLGTNHGGTKHVVFTDREGVLTNDFFVNLTDM 60 usage_00096.pdb 1 -PEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM 59 usage_00099.pdb 1 TPEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM 60 usage_00100.pdb 1 -PEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM 59 usage_00239.pdb 1 TPEELLLDRTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHGVFTDREGVLTNDFFVNLTDM 60 peellLdrTQLLGLTAPEMTVLIGGLRVLGTNHGGTKHgVFTDREGVLTNDFFVNLTDM usage_00087.pdb 61 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV 120 usage_00096.pdb 60 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV 119 usage_00099.pdb 61 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV 120 usage_00100.pdb 60 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV 119 usage_00239.pdb 61 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV 120 NYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFV usage_00087.pdb 121 AAWTKVMN- 128 usage_00096.pdb 120 AAWTKVMN- 127 usage_00099.pdb 121 AAWTKVMN- 128 usage_00100.pdb 120 AAWTKVMN- 127 usage_00239.pdb 121 AAWTKVMNA 129 AAWTKVMN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################