################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:19 2021 # Report_file: c_1483_60.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00283.pdb # 2: usage_00532.pdb # 3: usage_00611.pdb # 4: usage_00612.pdb # 5: usage_01123.pdb # 6: usage_01124.pdb # 7: usage_01698.pdb # 8: usage_01946.pdb # 9: usage_02285.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 61 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 61 ( 57.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00283.pdb 1 --GVLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMIRKQ 48 usage_00532.pdb 1 ---GFIVELLRGGVGVGQATLTRFYSLH---------T-FVLPLLTAVFMLMHFLMIRKQ 47 usage_00611.pdb 1 ---VLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMIRKQ 47 usage_00612.pdb 1 ---VLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMIRKQ 47 usage_01123.pdb 1 VVGVLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMI--- 47 usage_01124.pdb 1 -VGVLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLM---- 45 usage_01698.pdb 1 ---VLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMIRK- 46 usage_01946.pdb 1 --------------------KLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKK 40 usage_02285.pdb 1 -VGVLISDLLRGGSSVGQATLTRYYSAH---------T-FVLPWLIAVFMLLHFLMIRKQ 49 ltr ys h t fvlp l Avfml hflm usage_00283.pdb - usage_00532.pdb - usage_00611.pdb - usage_00612.pdb 48 G 48 usage_01123.pdb - usage_01124.pdb - usage_01698.pdb - usage_01946.pdb - usage_02285.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################