################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:23 2021 # Report_file: c_1432_134.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00026.pdb # 2: usage_00074.pdb # 3: usage_00603.pdb # 4: usage_00604.pdb # 5: usage_01378.pdb # 6: usage_01503.pdb # # Length: 73 # Identity: 1/ 73 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 73 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 73 ( 52.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 QMSAFWYAVRTAVINAASGRQTVDEALKD--------AQTGSELYRQSLEIISRYLREQA 52 usage_00074.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKD--------AQTGSELYRQSLEIISRYLREQA 51 usage_00603.pdb 1 -MSAFWYAVRTAVINAASGRQTVDAALAAA-------QTNAAAMATLEKLMKAFESLKSF 52 usage_00604.pdb 1 -MSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMATLEKLMKAFESLKSFQQQQQQQ 59 usage_01378.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKD--------AQTNSSS-MDVFMKGLSKAKE-- 48 usage_01503.pdb 1 -GALKAANARDVAR--------DAAFVDRL-------TL-----SDKALKTMVEGLRQVA 39 msafwyavRtavi vd al usage_00026.pdb 53 TG----------- 54 usage_00074.pdb 52 TG----------- 53 usage_00603.pdb 53 QQ----QQQQQQQ 61 usage_00604.pdb 60 QQQQQQ------- 65 usage_01378.pdb ------------- usage_01503.pdb 40 TL----------- 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################