################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:53 2021 # Report_file: c_0316_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00038.pdb # # Length: 96 # Identity: 19/ 96 ( 19.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 96 ( 26.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 96 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -APDVEQVLFGPSGVVEGARPGLIVVD-STNSPDWARKFAERLAQYGIEFLDAPVTGGQK 58 usage_00005.pdb 1 -APDVEQVLFGPSGVVEGARPGLIVVDMSTNSPDWARKFAERLAQYGIEFLDAPVTGGQK 59 usage_00006.pdb 1 -APDVEQVLFGPSGVVEGARPGLIVVDMSTNSPDWARKFAERLAQYGIEFLDAPVTGGQK 59 usage_00007.pdb 1 -SPHVKEVALGENGIIEGAKPGTVLID-SSIAPLASREISDALKAKGVE-LDAPVSGGEP 57 usage_00017.pdb 1 --PQVEDVLFGEHGCAKTSLQGKTIVD-SSISPIETKRFAQRVNEGADY-LDAPVSGGEI 56 usage_00018.pdb 1 DTPQVEDVLFGEHGCAKTSLQGKTIVD-SSISPIETKRFAQRVNEGADY-LDAPVSGGEI 58 usage_00038.pdb 1 TSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVG 60 p v v G G G D S P a lDAPV GG usage_00004.pdb 59 GAIEGTLTI-VGGKEELFHRLLPIFKAGRDIV-YG- 91 usage_00005.pdb 60 GAIEGTLTIMVGGKEELFHRLLPIFKAMGRDIVYMG 95 usage_00006.pdb 60 GAIEGTLTIMVGGKEELFHRLLPIFKAMGRDIVYMG 95 usage_00007.pdb 58 KAIDGTLSV-VGGDKAIFDKYYDLKAAGS--VVHTG 90 usage_00017.pdb 57 GAREGTLSI-VGGEQKVFDRVKPLFDILGKNITLV- 90 usage_00018.pdb 59 GAREGTLSI-VGGEQKVFDRVKPLFDILGKNITLVG 93 usage_00038.pdb 61 AARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCG 96 A GtL VGG F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################