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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:05:10 2021
# Report_file: c_0328_60.html
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#====================================
# Aligned_structures: 8
#   1: usage_00013.pdb
#   2: usage_00014.pdb
#   3: usage_00390.pdb
#   4: usage_00391.pdb
#   5: usage_00392.pdb
#   6: usage_00393.pdb
#   7: usage_00394.pdb
#   8: usage_00401.pdb
#
# Length:        237
# Identity:       57/237 ( 24.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     57/237 ( 24.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           94/237 ( 39.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00013.pdb         1  ----------------------PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL   38
usage_00014.pdb         1  ----------------------PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL   38
usage_00390.pdb         1  EVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTL   60
usage_00391.pdb         1  ----------------------ALRLTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSG   38
usage_00392.pdb         1  ----------------------ALRLTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSG   38
usage_00393.pdb         1  VPLCKQALEDLEKTSG---HDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL   57
usage_00394.pdb         1  -----------------------------------------YKEAAHLLNDALAIREKTL   19
usage_00401.pdb         1  -----------------------ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTS   37
                                                                                       

usage_00013.pdb        39  GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC   98
usage_00014.pdb        39  GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC   98
usage_00390.pdb        61  GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC  120
usage_00391.pdb        39  H-DHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLY   97
usage_00392.pdb        39  H-DHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLY   97
usage_00393.pdb        58  GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC  117
usage_00394.pdb        20  GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLC   79
usage_00401.pdb        38  GHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLY   97
                             DHP VA  LN LA  Y    KYK A  L   AL IREK LGK HP VA  L NLA L 

usage_00013.pdb        99  QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT  158
usage_00014.pdb        99  QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT  158
usage_00390.pdb       121  QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT  180
usage_00391.pdb        98  GKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALE  157
usage_00392.pdb        98  GKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALE  157
usage_00393.pdb       118  QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT  177
usage_00394.pdb        80  QNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT  139
usage_00401.pdb        98  GKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE  157
                              GK  E E    RALEI    LG   P VAK   NLA     QGK    E  Y   L 

usage_00013.pdb       159  RAHEKEFGSVNGDNK---------PIWMHAEEREES---------------------  185
usage_00014.pdb       159  RAHEKEFGSVNGDNK---------PIWMHAEEREESK--------------------  186
usage_00390.pdb       181  RAHEK----------------------------------------------------  185
usage_00391.pdb       158  IYATRL----GPDDPNVAKTKNNLASCYLKQG-------------------------  185
usage_00392.pdb       158  IYATRL----GPDDPNVAKTKNNLASCYLKQ--------------------------  184
usage_00393.pdb       178  RAHEK----------------------------------------------------  182
usage_00394.pdb       140  RAHEKEFGSVNGDNK---------PIWMHAEEREESKDKRRDSAPYGEYGSWYKACK  187
usage_00401.pdb       158  IYQTKL----GPDDPNVAKTKNNLASCYLKQG-------------------------  185
                                                                                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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