################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:40 2021 # Report_file: c_1045_62.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00220.pdb # 2: usage_00263.pdb # 3: usage_00316.pdb # 4: usage_00317.pdb # 5: usage_00318.pdb # 6: usage_00319.pdb # 7: usage_00438.pdb # 8: usage_00579.pdb # # Length: 49 # Identity: 2/ 49 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 49 ( 20.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 49 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 --VLFAVPGAFTPTCSLN----HLPGYLENRDAILA-RGVDDIAVVAV- 41 usage_00263.pdb 1 KGVLFGVPGAFT----PGCSKTHLPGFVEQAEALKA-KGVQVVASLSV- 43 usage_00316.pdb 1 KVILFGVPGAFTPTCSLK----HVPGFIEKAGELKS-KGVTEILCISV- 43 usage_00317.pdb 1 KVILFGVPGAFTPTCSLK----HVPGFIEKAGELKS-KGVTEILCISV- 43 usage_00318.pdb 1 KVILFGVPGAFTPTCSLK----HVPGFIEKAGELKS-KGVTEILCISV- 43 usage_00319.pdb 1 --ILFGVPGAFTPTCSLK----HVPGFIEKAGELKS-KGVTEILCISV- 41 usage_00438.pdb 1 --LLISLPGAFTPT-STK----MIPGYEEEYDYFIKENNFDDIYCITN- 41 usage_00579.pdb 1 YSIALIIPSLFE----KA----CAHFLPSFQQALNK-AGYQLLLGYS-D 39 l PgaFt pg e g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################