################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:05 2021 # Report_file: c_0750_15.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00133.pdb # 2: usage_00250.pdb # 3: usage_00405.pdb # 4: usage_00406.pdb # 5: usage_00501.pdb # 6: usage_00502.pdb # 7: usage_00503.pdb # 8: usage_00504.pdb # 9: usage_00505.pdb # 10: usage_00506.pdb # # Length: 74 # Identity: 16/ 74 ( 21.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 74 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 74 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 -TVTEVKGFGR----------------V-NFLPKVKIDVAIADDQLDEVIDIVSKAAYTG 42 usage_00250.pdb 1 ----EVKGRGV-----------------QDLIPKVKIELVVKEEDVDNVIDIICENARTG 39 usage_00405.pdb 1 LTVSEVKGF---------------------FLPKVKVEVAVSDDQYEQVVEAIQKAANTG 39 usage_00406.pdb 1 LTVSEVKGFGRQK-------------V--SFLPKVKVEVAVSDDQYEQVVEAIQKAANTG 45 usage_00501.pdb 1 MTVTEVKGRGE-------------------LLQKTKVEVVVSDDAVDEVVEAIVSSARTG 41 usage_00502.pdb 1 MTVTEVKGRGEQKGIRLQFRG---VEV--DLLQKTKVEVVVSDDAVDEVVEAIVSSARTG 55 usage_00503.pdb 1 MTVTEVKGRGEQKGI----------EV--DLLQKTKVEVVVSDDAVDEVVEAIVSSARTG 48 usage_00504.pdb 1 MTVTEVKGRGEQKGIRLQFR-GREVEV--DLLQKTKVEVVVSDDAVDEVVEAIVSSARTG 57 usage_00505.pdb 1 MTVTEVKGRGEQKGIR-------EVEV--DLLQKTKVEVVVSDDAVDEVVEAIVSSARTG 51 usage_00506.pdb 1 MTVTEVKGRGEQKGIRLQFR-GREVEV--DLLQKTKVEVVVSDDAVDEVVEAIVSSARTG 57 EVKG l K K ev v dd V i A TG usage_00133.pdb 43 KIGDGKIFVAE--- 53 usage_00250.pdb 40 NPGDGKIFVIPVER 53 usage_00405.pdb 40 RIGDGKIFVLD--- 50 usage_00406.pdb 46 RIGDGKIFVLD--- 56 usage_00501.pdb 42 KFGDGRIFVIP--- 52 usage_00502.pdb 56 KFGDGRIFVIP--- 66 usage_00503.pdb 49 KFGDGRIFVIP--- 59 usage_00504.pdb 58 KFGDGRIFVIP--- 68 usage_00505.pdb 52 KFGDGRIFVIP--- 62 usage_00506.pdb 58 KFGDGRIFVIP--- 68 GDG IFV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################