################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:57:51 2021 # Report_file: c_1424_60.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00025.pdb # 2: usage_00107.pdb # 3: usage_00153.pdb # 4: usage_00188.pdb # 5: usage_00189.pdb # 6: usage_00199.pdb # 7: usage_00231.pdb # 8: usage_00234.pdb # 9: usage_00235.pdb # 10: usage_00253.pdb # 11: usage_00257.pdb # 12: usage_00260.pdb # 13: usage_00261.pdb # 14: usage_00406.pdb # 15: usage_00415.pdb # 16: usage_00416.pdb # 17: usage_00432.pdb # 18: usage_00451.pdb # 19: usage_00544.pdb # 20: usage_00552.pdb # 21: usage_00585.pdb # 22: usage_00720.pdb # 23: usage_00776.pdb # # Length: 63 # Identity: 10/ 63 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 63 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 63 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 46 usage_00107.pdb 1 -------------FYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 45 usage_00153.pdb 1 -------VKYKTAFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 51 usage_00188.pdb 1 -------VVYKTAYYTYWLPLVMGLLVSGTLEKV--DKKATHKVAMVMGEYFQVQDDVMD 51 usage_00189.pdb 1 -------VVYKTAYYTYWLPLVMGLLVSGTLEKV--DKKATHKVAMVMGEYFQVQDDVMD 51 usage_00199.pdb 1 -ERYKAIVKYKTAFYSFYLPVAAAMYMVGIDS--KEEHENAKAILLEMGEYFQIQDDY-- 55 usage_00231.pdb 1 -------VKYKTAFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYL- 50 usage_00234.pdb 1 -------------FYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 45 usage_00235.pdb 1 EKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 58 usage_00253.pdb 1 ------------AFASFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 46 usage_00257.pdb 1 -------VKYKTAFASFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 51 usage_00260.pdb 1 ------------AFASFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 46 usage_00261.pdb 1 ------------AFASFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYL- 45 usage_00406.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYL- 45 usage_00415.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFAQIQDDYLD 46 usage_00416.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFAQIQDDYLD 46 usage_00432.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFAQIQDDYLD 46 usage_00451.pdb 1 -------------FYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFAQIQDDYL- 44 usage_00544.pdb 1 -------------FYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 45 usage_00552.pdb 1 ------------AFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 46 usage_00585.pdb 1 -------VKYKTAFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 51 usage_00720.pdb 1 EKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 58 usage_00776.pdb 1 -------VKYKTAFFSFYLPIAAAMYMAGIDG--EKEHANAKKILLEMGEFFQIQDDYLD 51 LP G k MGE Q QDD usage_00025.pdb --- usage_00107.pdb --- usage_00153.pdb --- usage_00188.pdb 52 CFT 54 usage_00189.pdb 52 CF- 53 usage_00199.pdb --- usage_00231.pdb --- usage_00234.pdb --- usage_00235.pdb --- usage_00253.pdb --- usage_00257.pdb --- usage_00260.pdb --- usage_00261.pdb --- usage_00406.pdb --- usage_00415.pdb --- usage_00416.pdb --- usage_00432.pdb --- usage_00451.pdb --- usage_00544.pdb 46 LFG 48 usage_00552.pdb --- usage_00585.pdb --- usage_00720.pdb --- usage_00776.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################