################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:39:06 2021 # Report_file: c_0145_32.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00011.pdb # 2: usage_00014.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # 6: usage_00027.pdb # 7: usage_00035.pdb # 8: usage_00036.pdb # 9: usage_00075.pdb # 10: usage_00107.pdb # 11: usage_00108.pdb # 12: usage_00113.pdb # 13: usage_00117.pdb # 14: usage_00118.pdb # 15: usage_00155.pdb # 16: usage_00252.pdb # 17: usage_00291.pdb # 18: usage_00297.pdb # 19: usage_00301.pdb # 20: usage_00310.pdb # 21: usage_00311.pdb # 22: usage_00322.pdb # 23: usage_00412.pdb # 24: usage_00413.pdb # 25: usage_00468.pdb # 26: usage_00469.pdb # 27: usage_00510.pdb # 28: usage_00511.pdb # 29: usage_00513.pdb # 30: usage_00537.pdb # 31: usage_00550.pdb # 32: usage_00554.pdb # 33: usage_00557.pdb # 34: usage_00562.pdb # # Length: 122 # Identity: 22/122 ( 18.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/122 ( 27.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/122 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00014.pdb 1 -VQLQQPGADLVMPGAPVKLSCLASGYIFTSSWINWVKQRPGRGLEWIGRIDPSDGEVHY 59 usage_00024.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00025.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00026.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00027.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00035.pdb 1 -VQLQQSGAELVRPGTSVKLSCKASGYSFTNYWMNWLRQRPGQGLDWIGMIHPSDSETRL 59 usage_00036.pdb 1 -VQLQQSGAELVRPGTSVKLSCKASGYSFTNYWMNWLRQRPGQGLDWIGMIHPSDSETRL 59 usage_00075.pdb 1 -VQLQQPGAELVKPGPSVKLSCKASGFTFTNYWMHWVKQRPGQGLEWIGEILPSNGRTNY 59 usage_00107.pdb 1 -VQLQQSGPELVKTGASVKISCKASGYSFTSYYMHWVKQSHGKSLEWIGEINPYNGGASY 59 usage_00108.pdb 1 -VQLQQSGPELVKTGASVKISCKASGYSFTSYYMHWVKQSHGKSLEWIGEINPYNGGASY 59 usage_00113.pdb 1 -VQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIQWIKQRPGQGLEWIGVINPGSGGTDY 59 usage_00117.pdb 1 -VQLVQSGAEVKKPGESLKISCKGSGYSFTTYWLGWVRQMPGKGLDWIGIMSPVDSDIRY 59 usage_00118.pdb 1 -VQLVQSGAEVKKPGESLKISCKGSGYSFTTYWLGWVRQMPGKGLDWIGIMSPVDSDIRY 59 usage_00155.pdb 1 -VQLVQSGAELKKPGSSVKVSCKASGYIFTSSWINWVKQAPGQGLEWIGRIDPSDGEVHY 59 usage_00252.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHY 59 usage_00291.pdb 1 --QLQESGPELVKPGASVKISCKASGYSFSDYNMSWVKQSNGKSLEWIGIIDPKYGTINY 58 usage_00297.pdb 1 ---LQQPKAELVAPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTAY 57 usage_00301.pdb 1 -VQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQKP--GLEWIGYISPGNGDIKY 57 usage_00310.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGEIDPSDSYTNY 59 usage_00311.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGEIDPSDSYTNY 59 usage_00322.pdb 1 -VQFQQSGAELVKPGASVKLSCKASGYTFTSYLMHWIKQRPGRGLEWIGRIDPNNVVTKF 59 usage_00412.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLECIGMIHPSDGETRL 59 usage_00413.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLECIGMIHPSDGETRL 59 usage_00468.pdb 1 -VQLQQSGPELVKPGASVKISCKVSGYAISSSWMNWVKQRPGQGLEWIGRIYPGDGDTKY 59 usage_00469.pdb 1 --QLQQSGAELAKPGASVKMSCKTSGYSFSSYWMHWVKQRPGQGLEWIGYINPSTGYTEN 58 usage_00510.pdb 1 EVQLQQSGAELVRPGTSVKLSCKASGYSFTNYWMNWLRQRPGQGLDWIGMIHPSDSETRL 60 usage_00511.pdb 1 -VQLQQSGAELVRPGTSVKLSCKASGYSFTNYWMNWLRQRPGQGLDWIGMIHPSDSETRL 59 usage_00513.pdb 1 -VQLQQPGSELVRPGASVKLSCKASGYTFTNYWMHWVKQRPGQGLEWIGNIYPGSGDSNY 59 usage_00537.pdb 1 -VQLVQSGAEVVKPGASVKLSCKASGYIFTSYYMYWVKQAPGQGLEWIGEINPSNGDTNF 59 usage_00550.pdb 1 -VQLQQSGDDLVKPGASVKLSCKASGYTFTTYYINWMRQRPGQGLEWIGRIAPASGTTYS 59 usage_00554.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGEIDPSDSYTNY 59 usage_00557.pdb 1 -VQLQQSGPELVKPGASVKISCKASGYTFSSSWMNWVKQRPGKGLEWIGRIYSGDGDAIY 59 usage_00562.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSHWMHWVKQRPGQGLEWIGEIDPSDSYINY 59 l q G s K SCk SGy f W Q L IG p usage_00011.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYG---SSYFDYWGQGTTVT 116 usage_00014.pdb 60 NQDFKDKATLTVDKSSSTAYIQLNSLTSEDSAVYYCARGFL-----PW-FADWGQGTLVT 113 usage_00024.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYG---TYYFDYWGQGTTLT 116 usage_00025.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYG---TYYFDYWGQGTTLT 116 usage_00026.pdb 60 NLKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYG---TYYFDYWGQGTTLT 116 usage_00027.pdb 60 NLKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYG---TYYFDYWGQGTTLT 116 usage_00035.pdb 60 NQKFKDKATLTVDRSSSTAYIQLSSPTSEDSAVYYCARDDY-----D--GAFWGQGTLVT 112 usage_00036.pdb 60 NQKFKDKATLTVDRSSSTAYIQLSSPTSEDSAVYYCARDDY-----D--GAFWGQGTLVT 112 usage_00075.pdb 60 NEKFKTKATLTVDKSSNTAYMQLSSLTSEDSAVYYCARSP---------SDYWGQGTTLT 110 usage_00107.pdb 60 NQKIKGRATFTVDTSSRTAYMQFNSLTSEDSAVYYCARSIYGH---SV-LDYWGQGTSVS 115 usage_00108.pdb 60 NQKIKGRATFTVDTSSRTAYMQFNSLTSEDSAVYYCARSIYGH---SV-LDYWGQGTSVS 115 usage_00113.pdb 60 NANFKGKATLTADKSSSIVYMQLSSLTSDDSAVYFCARDFYDY---DVGFDYWGQGTTLT 116 usage_00117.pdb 60 SPSFQGQVTMSVDKSITTAYLQWNSLKASDTAMYYCARRRPGQ---GY-FDFWGQGTLVT 115 usage_00118.pdb 60 SPSFQGQVTMSVDKSITTAYLQWNSLKASDTAMYYCARRRPGQ---GY-FDFWGQGTLVT 115 usage_00155.pdb 60 NQDFKDKATLTVDKSTNTAYMELSSLRSEDTAVYYCARGFL-----PW-FADWGQGTLVT 113 usage_00252.pdb 60 NQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVY---G--FDYWGQGTTLT 114 usage_00291.pdb 59 NQKFKGKATLTVDQASSTAYMQLNSLTSEDSAVYYCVRDYYGS---SY-FDYWGQGTTLT 114 usage_00297.pdb 58 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYG---GSYFDYWGQGTTLT 114 usage_00301.pdb 58 NEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKMEY---------LDYWGQGTTLT 108 usage_00310.pdb 60 NQKFKGKATLTVD---STAYMQLSSLTSEDSAVYYCANLRG-----Y--FDYWGQGTTLT 109 usage_00311.pdb 60 NQKFKGKATLTVD---STAYMQLSSLTSEDSAVYYCANLRG-----Y--FDYWGQGTTLT 109 usage_00322.pdb 60 NEKFKSKATLTVDKPSSTAYMELSSLTSEDSAVYYCARYAYCR---P--MDYWGQGTTVT 114 usage_00412.pdb 60 NQKFKDKATLTLDKSSSTAYMQLSSPTSEDSAVYYCTTH----------FDYWGQGTTLT 109 usage_00413.pdb 60 NQKFKDKATLTLDKSSSTAYMQLSSPTSEDSAVYYCTTH----------FDYWGQGTTLT 109 usage_00468.pdb 60 NGKFKDKATLTVDKSSSTAYMQLSSLTSVDSAVYFCARDGYRY---Y--FDYWGQGTSVT 114 usage_00469.pdb 59 NQKFKDKVTLTADKSSNTAYMQLNSLTSEDSAVYYCARSGR-----LY-FDVWGAGTTVT 112 usage_00510.pdb 61 NQKFKDKATLTVDRSSSTAYIQLSSPTSEDSAVYYCARDDY-----D--GAFWGQGTLVT 113 usage_00511.pdb 60 NQKFKDKATLTVDRSSSTAYIQLSSPTSEDSAVYYCARDDY-----D--GAFWGQGTLVT 112 usage_00513.pdb 60 DEKFKSKATLTVDTSSSTAYMQLSGLTSEDSAVYYCARGLA-----FY-FDHWGQGTTLT 113 usage_00537.pdb 60 NEKFKSKATLTVDKSASTAYMELSSLRSEDTAVYYCTRSDGRN---D--MDSWGQGTLVT 114 usage_00550.pdb 60 SEMFKDKATLTVDTSSNTAYIQLSSLSSEDSAVYFCARADYGFNSGEA-MDYWGQGTSVT 118 usage_00554.pdb 60 NQKFKGKATLTVD---STAYMQLSSLTSEDSAVYYCANLRG-----Y--FDYWGQGTTLT 109 usage_00557.pdb 60 NGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCAREGKTG---DLLLRSWGQGSALT 116 usage_00562.pdb 60 NQIFEGKATLTVDKSSTTAYLQLSSLTSEDSAVYYCARTAGLL---AP-MDYWGQGTSVT 115 T D t Y s D A Y C WGqGt usage_00011.pdb 117 VS 118 usage_00014.pdb 114 VS 115 usage_00024.pdb 117 V- 117 usage_00025.pdb 117 V- 117 usage_00026.pdb 117 V- 117 usage_00027.pdb 117 V- 117 usage_00035.pdb 113 VS 114 usage_00036.pdb 113 VS 114 usage_00075.pdb 111 VS 112 usage_00107.pdb 116 VS 117 usage_00108.pdb 116 VS 117 usage_00113.pdb 117 VS 118 usage_00117.pdb 116 VS 117 usage_00118.pdb 116 VS 117 usage_00155.pdb 114 VS 115 usage_00252.pdb 115 VS 116 usage_00291.pdb 115 VS 116 usage_00297.pdb 115 VS 116 usage_00301.pdb 109 VS 110 usage_00310.pdb 110 VS 111 usage_00311.pdb 110 VS 111 usage_00322.pdb 115 VS 116 usage_00412.pdb 110 VS 111 usage_00413.pdb 110 VS 111 usage_00468.pdb 115 VS 116 usage_00469.pdb 113 V- 113 usage_00510.pdb 114 VS 115 usage_00511.pdb 113 VS 114 usage_00513.pdb 114 VS 115 usage_00537.pdb 115 VS 116 usage_00550.pdb 119 VS 120 usage_00554.pdb 110 VS 111 usage_00557.pdb 117 VS 118 usage_00562.pdb 116 VS 117 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################