################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:28:57 2021 # Report_file: c_0685_60.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00013.pdb # 2: usage_00078.pdb # 3: usage_00252.pdb # 4: usage_00290.pdb # 5: usage_00291.pdb # 6: usage_00315.pdb # 7: usage_00316.pdb # 8: usage_00317.pdb # 9: usage_00351.pdb # 10: usage_00352.pdb # 11: usage_00356.pdb # 12: usage_00414.pdb # 13: usage_00415.pdb # 14: usage_00447.pdb # 15: usage_00752.pdb # 16: usage_01091.pdb # 17: usage_01097.pdb # 18: usage_01155.pdb # 19: usage_01206.pdb # 20: usage_01207.pdb # # Length: 101 # Identity: 4/101 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/101 ( 20.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/101 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_00078.pdb 1 ------IFAIYRKTSE-------------DE-----P-----SEK-----DALQCGRNIV 26 usage_00252.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_00290.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_00291.pdb 1 ------IFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 26 usage_00315.pdb 1 ------IFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 26 usage_00316.pdb 1 ------IFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 26 usage_00317.pdb 1 ------IFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 26 usage_00351.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_00352.pdb 1 ------IFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 26 usage_00356.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_00414.pdb 1 -VSTGSIFGIYSPNDECI-VD-SDHDDESQL-----S-----AEEQRCVVNVCQPGDNLL 47 usage_00415.pdb 1 AVSTGSIFGIYSPNDECIVDSD-------HDDESQLSAEEQRCVV-----NVCQPGDNLL 48 usage_00447.pdb 1 ---SIGTIFAIYRKTS-------------DE-----P-----SEK-----DALQCGRNIV 29 usage_00752.pdb 1 --SVGTIFGIYRKKST-------------DE-----P-----SEK-----DALQPGRNLV 30 usage_01091.pdb 1 -FTVGTIFGVWPG----------------DK-----L--------------TGITGRDQA 24 usage_01097.pdb 1 --SIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 30 usage_01155.pdb 1 --SIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 30 usage_01206.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 usage_01207.pdb 1 -VSIGTIFGIYRKNST-------------DE-----P-----SEK-----DALQPGRNLV 31 if q G n usage_00013.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGQFILVD--- 68 usage_00078.pdb 27 AAGYALYGSATLVALSTGQGVDLFMLD-PALGEFVLVEKD- 65 usage_00252.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRD- 70 usage_00290.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRD- 70 usage_00291.pdb 27 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRD- 65 usage_00315.pdb 27 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVD--- 63 usage_00316.pdb 27 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRN- 65 usage_00317.pdb 27 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRN- 65 usage_00351.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRN- 70 usage_00352.pdb 27 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVD--- 63 usage_00356.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRN- 70 usage_00414.pdb 48 AAGYCMYSSSVIFVLTIGKGVYAFTLD-PMYGEFVLTSEK- 86 usage_00415.pdb 49 AAGYCMYSSSVIFVLTIGKGVYAFTLD-PMYGEFVLTSEK- 87 usage_00447.pdb 30 AAGYALYGSATLVALSTGQGVDLFMLD-PALGEFVLVEKD- 68 usage_00752.pdb 31 AAGYALYGSATMLVLAMDCGVNCFMLD-PAIGEFILVDKD- 69 usage_01091.pdb 25 ASAMGIYGPRTTYVVAINGFPGTHEFLLMDDGKWQHVKETT 65 usage_01097.pdb 31 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRN- 69 usage_01155.pdb 31 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVDRD- 69 usage_01206.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVD--- 68 usage_01207.pdb 32 AAGYALYGSATMLVLAMVNGVNCFMLD-PAIGEFILVD--- 68 Aagy Y s l gv f ld p G f l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################