################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:01 2021 # Report_file: c_0473_16.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00173.pdb # 4: usage_00174.pdb # 5: usage_00269.pdb # 6: usage_00270.pdb # 7: usage_00345.pdb # 8: usage_00346.pdb # 9: usage_00347.pdb # 10: usage_00470.pdb # 11: usage_00471.pdb # 12: usage_00472.pdb # # Length: 124 # Identity: 47/124 ( 37.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/124 ( 37.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/124 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLS-----------------------NAGPELAKR 36 usage_00012.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLS------------------------AGPELAKR 35 usage_00173.pdb 1 GYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVER 60 usage_00174.pdb 1 GYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVER 60 usage_00269.pdb 1 GYINCLGALTGGQALQQAKAGVEAIYSG-WQVAADANTASS-YPDQSLYPVDSVPAVVKR 58 usage_00270.pdb 1 GYINCLGALTGGQALQQAKAGVEAIYSG-WQVAADANTASS-YPDQSLYPVDSVPAVVKR 58 usage_00345.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 usage_00346.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 usage_00347.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 usage_00470.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 usage_00471.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 usage_00472.pdb 1 -FVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKR 59 N LGAL G QA Q AG A Y P R usage_00011.pdb 37 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAE---GDPLDAFEIMKAYIEAGAAG 89 usage_00012.pdb 36 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAE---GDPLDAFEIMKAYIEAGAAG 88 usage_00173.pdb 61 INNTFRRADQIQWSAGIEPG-DPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGAAA 119 usage_00174.pdb 61 INNTFRRADQIQWSAGIEPG-DPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGAAA 119 usage_00269.pdb 59 INNSFRRADQIQWSNNIEPG-SKGYTDYFLPIVADAEAGFGGVLNAFEL-KA-IEAGAAG 115 usage_00270.pdb 59 INNSFRRADQIQWSNNIEPG-SKGYTDYFLPIVADAEAGFGGVLNAFEL-KA-IEAGAAG 115 usage_00345.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 usage_00346.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 usage_00347.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 usage_00470.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 usage_00471.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 usage_00472.pdb 60 INRTLQRADQIETAEGKGLSV----DTWFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAG 115 IN RADQI F PIVADAE G L AFE KA IEAGAA usage_00011.pdb 90 VHFE 93 usage_00012.pdb 89 VHFE 92 usage_00173.pdb 120 VHFE 123 usage_00174.pdb 120 VHFE 123 usage_00269.pdb 116 VHFE 119 usage_00270.pdb 116 VHFE 119 usage_00345.pdb 116 VHFE 119 usage_00346.pdb 116 VHFE 119 usage_00347.pdb 116 VHFE 119 usage_00470.pdb 116 VHFE 119 usage_00471.pdb 116 VHFE 119 usage_00472.pdb 116 VHFE 119 VHFE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################