################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:03 2021 # Report_file: c_1387_229.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00822.pdb # 2: usage_01086.pdb # 3: usage_02092.pdb # 4: usage_02440.pdb # 5: usage_02441.pdb # 6: usage_02466.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 76 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/ 76 ( 76.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00822.pdb 1 ---P-NDLLAAGFEEHKFRNFFNAF----------YSVVEL------VEK------DG-- 32 usage_01086.pdb 1 SLTE-IDEM-----------LKL------------DFVTRS------AKI-LSAF-IGDE 28 usage_02092.pdb 1 -PMSFTKW------------N--------------------MKDFEEVFNKE-RSIRWQ- 25 usage_02440.pdb 1 DQATLFNDW-----------SKL------------SFQDLA------FAI-R-LYIAQEE 29 usage_02441.pdb 1 DQATLFNDW-----------SKL------------SFQDLA------FAI-R-LYIAQEE 29 usage_02466.pdb 1 ------PGR-----------ILF--ARIVAEAVEDEKVAWE------LIQ---LDVPQE- 31 usage_00822.pdb 33 ---SVSSLLKVFND-- 43 usage_01086.pdb 29 I-PQEILEERVRAA-- 41 usage_02092.pdb 26 --SLITIINRLMQ--- 36 usage_02440.pdb 30 I-PDADLKDLIKRSYS 44 usage_02441.pdb 30 I-PDADLKDLIKRSYS 44 usage_02466.pdb 32 -KNSLKDLVYQAFL-- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################