################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:43 2021 # Report_file: c_1111_23.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00320.pdb # 2: usage_00321.pdb # 3: usage_00322.pdb # 4: usage_00323.pdb # 5: usage_00627.pdb # 6: usage_00628.pdb # 7: usage_00629.pdb # 8: usage_00630.pdb # 9: usage_00775.pdb # 10: usage_00776.pdb # 11: usage_00777.pdb # 12: usage_00778.pdb # # Length: 133 # Identity: 69/133 ( 51.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/133 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/133 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00320.pdb 1 --------------------------------RPSL--KSLFVDSYSEILFFVQSLFMLV 26 usage_00321.pdb 1 --------------------------------RPSL--KSLFVDSYSEILFFVQSLFMLV 26 usage_00322.pdb 1 --------------------------------RPSL--KSLFVDSYSEILFFVQSLFMLV 26 usage_00323.pdb 1 --------------------------------RPSL--KSLFVDSYSEILFFVQSLFMLV 26 usage_00627.pdb 1 TVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 58 usage_00628.pdb 1 TVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 58 usage_00629.pdb 1 TVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 58 usage_00630.pdb 1 TVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 58 usage_00775.pdb 1 ---DYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 55 usage_00776.pdb 1 ---DYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 55 usage_00777.pdb 1 ---DYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 55 usage_00778.pdb 1 ---DYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFV-D-SYSEILFFVQSLFMLV 55 RPSL SYSEILFFVQSLFMLV usage_00320.pdb 27 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILR---------- 76 usage_00321.pdb 27 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILR---------- 76 usage_00322.pdb 27 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILR---------- 76 usage_00323.pdb 27 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILR---------- 76 usage_00627.pdb 59 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYL 118 usage_00628.pdb 59 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYL 118 usage_00629.pdb 59 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYL 118 usage_00630.pdb 59 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYL 118 usage_00775.pdb 56 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL----------- 104 usage_00776.pdb 56 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL----------- 104 usage_00777.pdb 56 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL----------- 104 usage_00778.pdb 56 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL----------- 104 SVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL usage_00320.pdb ------------- usage_00321.pdb ------------- usage_00322.pdb ------------- usage_00323.pdb ------------- usage_00627.pdb 119 VFLFGFSTAVVTL 131 usage_00628.pdb 119 VFLFGFSTAVVTL 131 usage_00629.pdb 119 VFLFGFSTAVVTL 131 usage_00630.pdb 119 VFLFGFSTAVVTL 131 usage_00775.pdb ------------- usage_00776.pdb ------------- usage_00777.pdb ------------- usage_00778.pdb ------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################