################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:08:41 2021 # Report_file: c_0240_7.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00026.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00056.pdb # 7: usage_00059.pdb # 8: usage_00066.pdb # 9: usage_00075.pdb # 10: usage_00119.pdb # 11: usage_00136.pdb # 12: usage_00137.pdb # 13: usage_00140.pdb # 14: usage_00154.pdb # 15: usage_00162.pdb # 16: usage_00163.pdb # 17: usage_00164.pdb # 18: usage_00172.pdb # 19: usage_00173.pdb # 20: usage_00174.pdb # 21: usage_00175.pdb # 22: usage_00205.pdb # 23: usage_00206.pdb # 24: usage_00207.pdb # 25: usage_00227.pdb # # Length: 144 # Identity: 2/144 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/144 ( 3.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/144 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLM-- 53 usage_00025.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLML- 54 usage_00026.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDL--- 52 usage_00027.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLML- 54 usage_00028.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDL--- 52 usage_00056.pdb 1 -HTLLIVDDDDTVAE-LELVLRGAGYEV-RRAASGEEALQQIY-K-NL-PDALICDVLL- 53 usage_00059.pdb 1 -TKILIIDGDKDNCQKLKGFLEEKGISI-DLAYNCEEAIGKIF-S-NK-YDLIFLEIIL- 54 usage_00066.pdb 1 -VTILLADDEAILLLDFESTLTDAGFLV-TAVSSGAKAIELKSG--AA-IDGVVTDIRF- 54 usage_00075.pdb 1 -KKILIVEDSKFQAKTIANILNKYGYTV-EIALTGEAAVEKVS-GGWY-PDLILMDIELG 56 usage_00119.pdb 1 -KKILIVESDTALSATLRSALEGRGFTV-DETTDGKGSVEQIR-R-DR-PDLVVLAVDL- 54 usage_00136.pdb 1 -PHILIVEDELVTRNTLKSIFEAEGYDV-FEATDGAEMHQILS-E-YD-INLVIMDINL- 54 usage_00137.pdb 1 -PHILIVEDELVTRNTLKSIFEAEGYDV-FEATDGAEMHQILS-E-YD-INLVIMDINL- 54 usage_00140.pdb 1 --KILVVDDEKPIADILEFNLRKEGYEV-HCAHDGNEAVEMVE-E-LQ-PDLILLDIML- 53 usage_00154.pdb 1 -IEVLVVDDSRTSRHRT-AQLRKQLLQV-HEASHAREALATLE-Q-HPAIRLVLVDYY-- 53 usage_00162.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLML- 54 usage_00163.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDL--- 52 usage_00164.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILLML-- 53 usage_00172.pdb 1 --GVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAP-D-LR-PDIALVDIMLC 55 usage_00173.pdb 1 NVRVLVVEDERDLADLITEALKKEMFTV-DVCYDGEEGMYMAL-N-EP-FDVVILDIML- 55 usage_00174.pdb 1 -VRVLVVEDERDLADLITEALKKEMFTV-DVCYDGEEGMYMAL-N-EP-FDVVILDIML- 54 usage_00175.pdb 1 --KIAVVDDDKNILKKVSEKLQQLGRVK-TFLT-GEDFLND-E---EA-FHVVVLDVL-- 49 usage_00205.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILLML-- 53 usage_00206.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLML- 54 usage_00207.pdb 1 --KILVVDDEKPIADILEFNLRKEGYEV-HCAHDGNEAVEMVE-E-LQ-PDLILLDIML- 53 usage_00227.pdb 1 -KKILIVDDEKPISDIIKFNMTKEGYEV-VTAFNGREALEQFE-A-EQ-PDIIILDLML- 54 l usage_00024.pdb 54 ---IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 96 usage_00025.pdb 55 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 99 usage_00026.pdb 53 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 97 usage_00027.pdb 55 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 99 usage_00028.pdb 53 ---IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 95 usage_00056.pdb 54 PG-IDGYTLCKRVRQHPL-T----KTLPILLTA-QG-D---ISAKIAGFEAGA--NDYLA 100 usage_00059.pdb 55 SD-GDGWTLCKKIRNV---T---TCPIVY--T-YIN-E---DQSILNALNSGG--DDYLI 98 usage_00066.pdb 55 CQPPDGWQVARVAREI---D---PNPIVYI-S-GH--------AALEWASNGVPDSIILE 98 usage_00075.pdb 57 EG-MDGVQTALAIQQI---S---ELPVVFL-T-AHT-EPAVVEKIRS---VTA--YGYVM 101 usage_00119.pdb 55 SAGQNGYLICGKLKKDDDLK---NVPIVII-G-NPDGF---AQHRKLK--AHA--DEYVA 102 usage_00136.pdb 55 PG-KNGLLLARELREQ---A---NVALMFL-T-GRD-N---EVDKILGLEIGA--DDYIT 99 usage_00137.pdb 55 PG-KNGLLLARELREQ---A---NVALMFL-T-GRD-N---EVDKILGLEIGA--DDYIT 99 usage_00140.pdb 54 PN-KDGVEVCREVRKK---Y---DMPIIML-T-AKD-S---EIDKVIGLEIGA--DDYVT 98 usage_00154.pdb 54 PE-IDGISLVRL-RER---YSKQQLAIIGI-S-VSD-K---RGLSARYLKQGA--NDFLN 100 usage_00162.pdb 55 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 99 usage_00163.pdb 53 ----DGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 94 usage_00164.pdb 54 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 98 usage_00172.pdb 56 GA-LDGVETAARLAAG---C---NLPIIFI-T-SSQ-D---VETFQRAKRVNP--FGYLA 100 usage_00173.pdb 56 PV-HDGWEILKSMRESG--V---NTPVLML-T-ALS-D---VEYRVKGLNMGA--DDYLP 101 usage_00174.pdb 55 PV-HDGWEILKSMRESG--V---NTPVLML-T-ALS-D---VEYRVKGLNMGA--DDYLP 100 usage_00175.pdb 50 PD-YSGYEICRI-KETR--P---ETWVILL-T-LLS-D---DESVLKGFEAGA--DDYVT 94 usage_00205.pdb 54 ---PDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 96 usage_00206.pdb 55 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 99 usage_00207.pdb 54 PN-KDGVEVCREVRKK---Y---DMPIIML-T-AKD-S---EIDKVIGLEIGA--DDYVT 98 usage_00227.pdb 55 PE-IDGLEVAKTIRKT---S---SVPILML-S-AKD-S---EFDKVIGLELGA--DDYVT 99 G usage_00024.pdb 97 KPFSNRELQARVKALLRRS----- 115 usage_00025.pdb 100 KPFSNRELQARVKALLRRS----- 118 usage_00026.pdb 98 KPFSNRELQARVKALLRR------ 115 usage_00027.pdb 100 KPFSNRELQARVKALLRRS----- 118 usage_00028.pdb 96 KPFSNRELQARVKALLRRS----- 114 usage_00056.pdb 101 KPFEPQELVYRVKNIL-------- 116 usage_00059.pdb 99 KPLNLEILYAKVKAILRRN----- 117 usage_00066.pdb 99 KPFTSAQLITAVSQLLNAR----- 117 usage_00075.pdb 102 KSATEQVLITIVEMALRLYEANVH 125 usage_00119.pdb 103 KPVDADQLVERAGALI-------- 118 usage_00136.pdb 100 KPFNPRELTIRARNLLSRT----- 118 usage_00137.pdb 100 KPFNPRELTIRARNLLSRT----- 118 usage_00140.pdb 99 KPFSTRELLARVKANLRR------ 116 usage_00154.pdb 101 QPFEPEELQCRVSHNLEALEQ--- 121 usage_00162.pdb 100 KPFSNRELQARVKALLRR------ 117 usage_00163.pdb 95 KPFSNRELQARVKALLRR------ 112 usage_00164.pdb 99 KPFSNRELQARVKALLRRS----- 117 usage_00172.pdb 101 KPVAADTLHRSIEMAIHKKKLEE- 123 usage_00173.pdb 102 KPFDLRELIARVRALI-------- 117 usage_00174.pdb 101 KPFDLRELIARVRALIR------- 117 usage_00175.pdb 95 KPFNPEILLARVKRFLE------- 111 usage_00205.pdb 97 KPFSNRELQARVKALLRRS----- 115 usage_00206.pdb 100 KPFSNRELQARVKALLRRS----- 118 usage_00207.pdb 99 KPFSTRELLARVKANLRR------ 116 usage_00227.pdb 100 KPFSNRELQARVKALLR------- 116 kp L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################