################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:14 2021 # Report_file: c_0817_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00072.pdb # 4: usage_00073.pdb # 5: usage_00121.pdb # 6: usage_00169.pdb # 7: usage_00170.pdb # 8: usage_00174.pdb # 9: usage_00234.pdb # 10: usage_00235.pdb # 11: usage_00271.pdb # 12: usage_00276.pdb # # Length: 94 # Identity: 58/ 94 ( 61.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 94 ( 61.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 94 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 --------HYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 52 usage_00026.pdb 1 --------HYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 52 usage_00072.pdb 1 -------THYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 53 usage_00073.pdb 1 -------THYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 53 usage_00121.pdb 1 -------THYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 53 usage_00169.pdb 1 -------THYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 53 usage_00170.pdb 1 -------THYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 53 usage_00174.pdb 1 -------VHYALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREET 53 usage_00234.pdb 1 --------HYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 52 usage_00235.pdb 1 --------HYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 52 usage_00271.pdb 1 ---KIGQVHYALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREET 57 usage_00276.pdb 1 SPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETS 60 HYAL KLL F YF I YPL KLDL AIPDF GAMENWGL T RE usage_00025.pdb 53 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 86 usage_00026.pdb 53 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 86 usage_00072.pdb 54 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 87 usage_00073.pdb 54 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 87 usage_00121.pdb 54 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 87 usage_00169.pdb 54 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 87 usage_00170.pdb 54 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 87 usage_00174.pdb 54 LLYDSNTSSMADRKLVTKIIAHELAHQWFGNLVT 87 usage_00234.pdb 53 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 86 usage_00235.pdb 53 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 86 usage_00271.pdb 58 LLYDSNTSSMADRKLVTKIIAHELAHQWFGNLVT 91 usage_00276.pdb 61 LLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 94 LL D TSS D VT IAHELAHQWFGNLVT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################