################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:04 2021 # Report_file: c_1221_313.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00863.pdb # 2: usage_01206.pdb # 3: usage_01555.pdb # 4: usage_01685.pdb # 5: usage_01687.pdb # 6: usage_01689.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 49 ( 8.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 49 ( 38.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00863.pdb 1 ---FVSAFVTA-GHMRFIMLHDVR----QEDGIKNFFTDVYDLYIKFAM 41 usage_01206.pdb 1 -TNLGLAI------VVAAIKR---CETMRFGQFIAAYEDIVRRARD--- 36 usage_01555.pdb 1 GVHLGFGAATERGLLVPVVTD---AQDKNTRELASRVAELITGARE--- 43 usage_01685.pdb 1 NINISIAIAAGDLLYVPVIKN---ADEKSIKGIAREISELAGKARN--- 43 usage_01687.pdb 1 NINISIAIAAGDLLYVPVIKN---ADEKSIKGIAREISELAGKARN-G- 44 usage_01689.pdb 1 NINISIAIAAGDLLYVPVIKN---ADEKSIKGIAREISELAGKARN--- 43 a v ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################