################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:45 2021 # Report_file: c_0109_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00025.pdb # 2: usage_00077.pdb # 3: usage_00080.pdb # 4: usage_00083.pdb # 5: usage_00091.pdb # 6: usage_00097.pdb # 7: usage_00125.pdb # 8: usage_00126.pdb # 9: usage_00127.pdb # # Length: 243 # Identity: 21/243 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/243 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/243 ( 25.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 ---EPKMLFLTQQMFGG-----------------QISQ--------IVAGAVAEFERYFA 32 usage_00077.pdb 1 AL---------------------------------AE---------RIADVLNPLTAYLK 18 usage_00080.pdb 1 ----VTFRALSNEIVA-PT----------------GGD--------AELAAYERLAAYLD 31 usage_00083.pdb 1 --DHTWLRANAVALQE-A-ST-T--RAR----DGRGYA--------RAEAASQEFTRYFR 41 usage_00091.pdb 1 ---EDMLIDLTNHAFG-G--------------------EDELFDGMTPRQAHTEILVYFD 36 usage_00097.pdb 1 ----GAVGRWSRDVGR-T-LDRG--ASA------EDMR--------RGHAAIAEFADYVE 38 usage_00125.pdb 1 ---EPKFSRASALLAA-A-LDPFLA--LTGETS-DLFD--------EQMKAGMWLRDYLR 44 usage_00126.pdb 1 ---EPKFSRASALLAA-A-LDPFLA--LTGETS-DLFD--------EQMKAGMWLRDYLR 44 usage_00127.pdb 1 ---EPKFSRASALLAA-A-LDPFLA--LTGETS-DLFD--------EQMKAGMWLRDYLR 44 a Y usage_00025.pdb 33 GLAAERRRNP-TDDVATVIANA--VV--DGEPMSDRDTAGYYIITASAGHDTTSASSAGA 87 usage_00077.pdb 19 ARCAERRADP-GDDLISRLVLA--EV--DGRALDDEEAANFSTALLLAGHITTTVLLGNI 73 usage_00080.pdb 32 ELIDDKRSTAPADDLLGDLIRTRAE---DDDRLSGEELRAMAFILLVAGHETTVNLITNG 88 usage_00083.pdb 42 REVDRRGGDD-RDDLLTLLVRA--R-DTG-SPLSVDGIVGTCVHLLTAGHETTTNFLAKA 96 usage_00091.pdb 37 ELITARRKEP-GDDLVSTLVTD--D------DLTIDDVLLNCDNVLIGGNETTRHAITGA 87 usage_00097.pdb 39 RALARRRREG-GEDLLALMLDA--H-D-R-GLMSRNEIVSTVVTFIFTGHETVASQVGNA 92 usage_00125.pdb 45 ALIDERRRTP-GEDLMSGLVAV--E-ESG-DQLTEDEIIATCNLLLIAGHETTVNLIANA 99 usage_00126.pdb 45 ALIDERRRTP-GEDLMSGLVAV--E-ESG-DQLTEDEIIATCNLLLIAGHETTVNLIANA 99 usage_00127.pdb 45 ALIDERRRTP-GEDLMSGLVAV--E-ESG-DQLTEDEIIATCNLLLIAGHETTVNLIANA 99 rr Dl Gh Tt usage_00025.pdb 88 ALALARDPDLFARVKADRN-LLPGIVEEAIRWTTPVQHF-MRTAATDTELCGQKIAAGDW 145 usage_00077.pdb 74 VRTLDEHPAHWDAAAEDPG-RIPAIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIPADVM 131 usage_00080.pdb 89 VHTLLTHPDQLAALRADMT-LLDGAVEEVLRFEGPVETATYRYAAESMEIGGTAIAEGDP 147 usage_00083.pdb 97 VLTLRAHRDVLDELRTTPE-STPAAVEELMRYDPPVQAV-TRWAYEDIRLGDHDIPRGSR 154 usage_00091.pdb 88 VHALATVPGLLTALRDGS-ADVDTVVEEVLRWTSPAMHV-LRVTTADVTINGRDLPSGTP 145 usage_00097.pdb 93 VLSLLAHPDQLDLLRRRPD-LLAQAVEECLRYDPSVQSN-TRQLDVDVELRGRRLRRDDV 150 usage_00125.pdb 100 ALAMLRTPGQWAALAADGS-RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDT 157 usage_00126.pdb 100 ALAMLRTPGQWAALAADGS-RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDT 157 usage_00127.pdb 100 ALAMLRTPGQWAALAADGS-RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDT 157 p EE R p R usage_00025.pdb 146 LMLNYVAANHDPAQFPEPRKFDPTRPAN--RHLAFGAGSHQCLGLHLARLEMRVLLDVLL 203 usage_00077.pdb 132 VNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEII 191 usage_00080.pdb 148 VMIGLDAAGRDPARHPDPHVFDIHRAPQ--GHLAFGHGIHYCLGAPLARLEARVALRSLL 205 usage_00083.pdb 155 VVALLGSANRDPARFPDPDVLDVHRAAE--RQVGFGLGIHYCLGATLARAEAEIGLRALL 212 usage_00091.pdb 146 VVAWLPAANRDPAEFDDPDTFLPGRKPN--RHITFGHGMHHCLGSALARIELSVVLRVLA 203 usage_00097.pdb 151 VVVLAGAANRDPRRYDRPDDFDIERDPV--PSMSFGAGMRYCLGSYLARTQLRAAVAALA 208 usage_00125.pdb 158 MLLLLAAAHRDPTIVGAPDRFDPDRAQI--RHLGFGKGAHFCLGAPLARLEATVALPALA 215 usage_00126.pdb 158 MLLLLAAAHRDPTIVGAPDRFDPDRAQI--RHLGFGKGAHFCLGAPLARLEATVALPALA 215 usage_00127.pdb 158 MLLLLAAAHRDPTIVGAPDRFDPDRAQI--RHLGFGKGAHFCLGAPLARLEATVALPALA 215 A rDp P fd R FG G h CLG LAR e l l usage_00025.pdb 204 DR- 205 usage_00077.pdb 192 AR- 193 usage_00080.pdb 206 ERC 208 usage_00083.pdb 213 DGI 215 usage_00091.pdb 204 ER- 205 usage_00097.pdb 209 RL- 210 usage_00125.pdb 216 ARF 218 usage_00126.pdb 216 ARF 218 usage_00127.pdb 216 ARF 218 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################