################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:01 2021 # Report_file: c_1445_47.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01121.pdb # 2: usage_01812.pdb # 3: usage_01816.pdb # 4: usage_05233.pdb # 5: usage_05234.pdb # 6: usage_10815.pdb # 7: usage_11110.pdb # 8: usage_12465.pdb # 9: usage_12466.pdb # 10: usage_12469.pdb # 11: usage_17353.pdb # # Length: 25 # Identity: 0/ 25 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 25 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 25 ( 72.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01121.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_01812.pdb 1 -----------RERQYTPWFVVNQD 14 usage_01816.pdb 1 -----------RERQYTPWFVVNQD 14 usage_05233.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_05234.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_10815.pdb 1 ---VSVKVLSSSEISVSW------H 16 usage_11110.pdb 1 -APK-------TFTH-PD-TGIVFN 15 usage_12465.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_12466.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_12469.pdb 1 APTT-------RNLLTTPKFTVAWD 18 usage_17353.pdb 1 APTT-------RNLLTTPKFTVAWD 18 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################