################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:22 2021 # Report_file: c_1483_92.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00143.pdb # 2: usage_00250.pdb # 3: usage_00259.pdb # 4: usage_00610.pdb # 5: usage_00930.pdb # 6: usage_01480.pdb # 7: usage_01508.pdb # 8: usage_01737.pdb # 9: usage_01763.pdb # 10: usage_02325.pdb # 11: usage_02478.pdb # # Length: 31 # Identity: 0/ 31 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 31 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 31 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 -T-SRVLKEDKE-RWEDVKEEMTSAL----- 23 usage_00250.pdb 1 -T-ARVLQEDKD-HWDEVKEEMTSALATMRV 28 usage_00259.pdb 1 -TADTSKSSDF--RYEEEAQAFLVS------ 22 usage_00610.pdb 1 -T-KSEQKKNPQ-AVLDVLEFYNSKKTS--- 25 usage_00930.pdb 1 -D-QQAEARAFL-S-EEMIAEFKA------- 20 usage_01480.pdb 1 -T-SRVLKEDKE-RWEDVKEEMTSALATMR- 27 usage_01508.pdb 1 -T-SRVLKEDKE-RWEDVKEEMTSALATM-- 26 usage_01737.pdb 1 -N-AHIAAY-PEVDWHQFSEEFVTSLG---- 24 usage_01763.pdb 1 -T-SRVLKEDKE-RWEDVKEEMTSALAT--- 25 usage_02325.pdb 1 -T-SRVLKEDKE-RWEDVKEEMTSAL----- 23 usage_02478.pdb 1 HT-SRVLKEDKE-RWEDVKEEMTSALAT--- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################