################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:13:24 2021 # Report_file: c_0118_18.html ################################################################################################ #==================================== # Aligned_structures: 31 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00033.pdb # 7: usage_00036.pdb # 8: usage_00062.pdb # 9: usage_00069.pdb # 10: usage_00070.pdb # 11: usage_00124.pdb # 12: usage_00125.pdb # 13: usage_00185.pdb # 14: usage_00206.pdb # 15: usage_00207.pdb # 16: usage_00221.pdb # 17: usage_00222.pdb # 18: usage_00223.pdb # 19: usage_00238.pdb # 20: usage_00239.pdb # 21: usage_00240.pdb # 22: usage_00245.pdb # 23: usage_00287.pdb # 24: usage_00298.pdb # 25: usage_00324.pdb # 26: usage_00333.pdb # 27: usage_00334.pdb # 28: usage_00384.pdb # 29: usage_00385.pdb # 30: usage_00447.pdb # 31: usage_00524.pdb # # Length: 129 # Identity: 44/129 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/129 ( 40.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/129 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 VKLQESGGGLVQPGRSLKLSCAASGFTFSDSYLAWVRQAPTKGLEWVASITNSGGRFYYR 60 usage_00006.pdb 1 VKLQESGGGLVQPGRSLKLSCAASGFTFSDSYLAWVRQAPTKGLEWVASITNSGGRFYYR 60 usage_00012.pdb 1 VQLQESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAFISNGGGSTYYP 60 usage_00013.pdb 1 VQLQESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAFISNGGGSTYYP 60 usage_00014.pdb 1 VQLQESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAFISNGGGSTYYP 60 usage_00033.pdb 1 VILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGGNTYYP 60 usage_00036.pdb 1 VQLVESGGGLVTPGGSLKLSCAASGFAFNYYDMFWVRQNTEKRLEWVAYINSGGGNTYYP 60 usage_00062.pdb 1 VQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYP 60 usage_00069.pdb 1 -NLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAYISQGGDITDYP 59 usage_00070.pdb 1 -NLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAYISQGGDITDYP 59 usage_00124.pdb 1 VQLEESGGGLVTPGGSLRLSCAASGYVFSTYDMSWVRQTPEKRLEWVAFISSGGGRTSYP 60 usage_00125.pdb 1 VQLEESGGGLVTPGGSLRLSCAASGYVFSTYDMSWVRQTPEKRLEWVAFISSGGGRTSYP 60 usage_00185.pdb 1 VQLQESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAFISNGGGSTYYP 60 usage_00206.pdb 1 VKLVESGGGLVQPGGSLTLSCATSGFTFSDYYIYWVRQTPEKRLEWVAYISNSGGNTYYS 60 usage_00207.pdb 1 VKLVESGGGLVQPGGSLKLSCATSGFTFSDYYIYWVRQTPEKRLEWVAYISNGGYKTYYP 60 usage_00221.pdb 1 -KLLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISSGG-ITYYP 58 usage_00222.pdb 1 -KLLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISSGG-ITYYP 58 usage_00223.pdb 1 VNLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAYISQGGDITDYP 60 usage_00238.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTLHYA 60 usage_00239.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTLHYA 60 usage_00240.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTLHYA 60 usage_00245.pdb 1 VQLVESGGGLVKPGGSLKLSCAASGFIFSDYYMYWVRQTPEKRLEWVATISDGNSYTYYV 60 usage_00287.pdb 1 VKLVESGGGLVKPGGSLKLSCAASGFSFRNYGMSWVRQTPEKRLEWVASISYGG-LIYYP 59 usage_00298.pdb 1 VHLVESGGGLVKPGGSLKLSCAASGFTFSGYYMYWVRQTPEKRLEWVASISDGGSFTYYP 60 usage_00324.pdb 1 VQLVESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYP 60 usage_00333.pdb 1 VKLVESGGGLVKPGGSLKLSCAASGFTFNNYVMVWLRQTPEKRLEWVASISRGG-STYYP 59 usage_00334.pdb 1 VKLVESGGGLVKPGGSLKLSCAASGFTFNNYVMVWLRQTPEKRLEWVASISRGG-STYYP 59 usage_00384.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFRRFGMHWVRQSPEKGLEWVAYIGGGSSTIYYA 60 usage_00385.pdb 1 VQLVESGGGLVQPGGSRKLSCAASGFTFRRFGMHWVRQSPEKGLEWVAYIGGGSSTIYYA 60 usage_00447.pdb 1 VKLQESGGDLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASITNGG-STYYS 59 usage_00524.pdb 1 VKLVESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQNSEKRLEWVAFISNGGGSAFYA 60 L ESGGgLV pG S SC SG F W RQ K LE VA I Y usage_00005.pdb 61 DSVKGRFTISRDNAKSTLYLQMDSLRSEDTATYYCTR-----------------MDYWGQ 103 usage_00006.pdb 61 DSVKGRFTISRDNAKSTLYLQMDSLRSEDTATYYCTR-----------------MDYWGQ 103 usage_00012.pdb 61 DTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGRG--------Y---VWFAYWGQ 109 usage_00013.pdb 61 DTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGRG--------Y---VWFAYWGQ 109 usage_00014.pdb 61 DTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGRG--------Y---VWFAYWGQ 109 usage_00033.pdb 61 DSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYCARYYR--------Y---EAWFASWG 109 usage_00036.pdb 61 DTVKGRFTISRDNAKKTLFLQMSSLRSEDTAMYYCARQLY--------G---NSFFDYWG 109 usage_00062.pdb 61 DTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNY--------A---VYGMDYWG 109 usage_00069.pdb 60 DTVKGRFTISRDNAKNSLYLQMSRLKSEDTAMYYCARGLD--------D---GAWFAYWG 108 usage_00070.pdb 60 DTVKGRFTISRDNAKNSLYLQMSRLKSEDTAMYYCARGLD--------D---GAWFAYWG 108 usage_00124.pdb 61 DTVKGRFTISRDDAKNTLYLQMSSLQSEDTAMYYCTRHFY--------A---VLDYWGRG 109 usage_00125.pdb 61 DTVKGRFTISRDDAKNTLYLQMSSLQSEDTAMYYCTRHFY--------A---VLDYWGRG 109 usage_00185.pdb 61 DTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGRG--------Y---VWFAYWGQ 109 usage_00206.pdb 61 DAVKGRFTISRDNAKNTLFLQMSRLKSEDTAVYYCARQWG--------G---AMDYWGQG 109 usage_00207.pdb 61 DTVKGRFTISRDNAKNILYLQMSRLKSEDTGIYYCARG----------------MDYWGQ 104 usage_00221.pdb 59 DSVAGRFTISRDNVRNILYLQMSSLRSEDTALYYCARGQG--------R------PYWGQ 104 usage_00222.pdb 59 DSVAGRFTISRDNVRNILYLQMSSLRSEDTALYYCARGQG--------R------PYWGQ 104 usage_00223.pdb 61 DTVKGRFTISRDNAKNSLYLQMSRLKSEDTAMYYCARGLD--------D---GAWFAYWG 109 usage_00238.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARWGNY-----P-H---YAMDYWGQ 111 usage_00239.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARWGNY-----P-H---YAMDYWGQ 111 usage_00240.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARWGNY-----P-H---YAMDYWGQ 111 usage_00245.pdb 61 DSVKGRFTISRDNAKNNLYLQMSSLKSEDTAIYYCARDGPT-----D-SSGYGGFGYWGQ 114 usage_00287.pdb 60 DSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS--------F---LVWFTFWG 108 usage_00298.pdb 61 DSVKGRFTISRDNAKNNLYLQMSSLRSDDTAMYYCSRPDDY-----S-Y---DGFAYWGQ 111 usage_00324.pdb 61 DTVKGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPA--------G---RAWFAYWG 109 usage_00333.pdb 60 DSVKGRFTISRDNARNILYLQMSSLRSEDTAMYYCVRGTT--------I---VAGDVWGA 108 usage_00334.pdb 60 DSVKGRFTISRDNARNILYLQMSSLRSEDTAMYYCVRGTT--------I---VAGDVWGA 108 usage_00384.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCTRDET--------G---SWFAYWGQ 109 usage_00385.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCTRDET--------G---SWFAYWGQ 109 usage_00447.pdb 60 DSVKGRFIISRDNARNILSLQMSSLRSEDTAMYYCERGEL--------T---YAMDYWGQ 108 usage_00524.pdb 61 DIVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCTRHTLYDTLYGNYP---VWFADWGQ 117 D GRftISRD L LQM L seDTa YyC R usage_00005.pdb 104 G-TTVTVS- 110 usage_00006.pdb 104 G-TTVTVS- 110 usage_00012.pdb 110 G-TTVTVS- 116 usage_00013.pdb 110 G-TTVTV-- 115 usage_00014.pdb 110 G-TTVTVS- 116 usage_00033.pdb 110 QGTLVTVS- 117 usage_00036.pdb 110 QGTSLTVS- 117 usage_00062.pdb 110 QGTTVTVSS 118 usage_00069.pdb 109 QGTLVTVS- 116 usage_00070.pdb 109 QGTLVTV-- 115 usage_00124.pdb 110 --TTLTVS- 115 usage_00125.pdb 110 --TTLTVS- 115 usage_00185.pdb 110 G-TTVTVS- 116 usage_00206.pdb 110 --TSVTV-- 114 usage_00207.pdb 105 G-TSVTV-- 110 usage_00221.pdb 105 G-TLVTVS- 111 usage_00222.pdb 105 G-TLVTVS- 111 usage_00223.pdb 110 QGTLVTV-- 116 usage_00238.pdb 112 G-TSVTVS- 118 usage_00239.pdb 112 G-TSVTVS- 118 usage_00240.pdb 112 G-TSVTVS- 118 usage_00245.pdb 115 G-TLVTVS- 121 usage_00287.pdb 109 QGTLVTVS- 116 usage_00298.pdb 112 G-TLVTVS- 118 usage_00324.pdb 110 QGTLVTVS- 117 usage_00333.pdb 109 G-TTVTVS- 115 usage_00334.pdb 109 G-TTVTVS- 115 usage_00384.pdb 110 G-TLVTV-- 115 usage_00385.pdb 110 G-TLVTVS- 116 usage_00447.pdb 109 G-TTVTVS- 115 usage_00524.pdb 118 G-TLVTVS- 124 T TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################