################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:22 2021 # Report_file: c_0055_22.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00145.pdb # 2: usage_00146.pdb # 3: usage_00238.pdb # 4: usage_00255.pdb # 5: usage_00256.pdb # 6: usage_00373.pdb # # Length: 220 # Identity: 128/220 ( 58.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 128/220 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/220 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 -TEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRCH-DDARV 58 usage_00146.pdb 1 -TEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRCH-DDARV 58 usage_00238.pdb 1 STQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKV 60 usage_00255.pdb 1 DTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRCHMDDARV 60 usage_00256.pdb 1 DTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRCHMDDARV 60 usage_00373.pdb 1 STQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKV 60 T K IAKALD FG YIE T PVAS QSR D E LGLK K THI C D A V usage_00145.pdb 59 AVETGVDGVDVVIGT------TYIIDSATEVINFVKS-KG-IEVRFSSEDSFRSDLVDLL 110 usage_00146.pdb 59 AVETGVDGVDVVIGT------TYIIDSATEVINFVKS-KG-IEVRFSSEDSFRSDLVDLL 110 usage_00238.pdb 61 AVETGVQGIDLLFGTSKGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLL 120 usage_00255.pdb 61 AVETGVDGVDVVIGT-S---MTYIIDSATEVINFVKS-KG-IEVRFSSEDSFRSDLVDLL 114 usage_00256.pdb 61 AVETGVDGVDVVIG------MTYIIDSATEVINFVKS-KG-IEVRFSSEDSFRSDLVDLL 112 usage_00373.pdb 61 AVETGVQGIDLLFGT--GRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLL 118 AVETGV G D G II A EVI EVRFS ED FRS DLL usage_00145.pdb 111 SLYKAVDKIG-VNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHNDTG-AIAN 166 usage_00146.pdb 111 SLYKAVDKIG-VNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHNDTG-AIAN 166 usage_00238.pdb 121 AVYEAVA--PYVDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIAN 178 usage_00255.pdb 115 SLYKAVDKIG-VNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHNDTGMAIAN 171 usage_00256.pdb 113 SLYKAVDKIG-VNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHNDTGMAIAN 169 usage_00373.pdb 119 AVYEAVA--PYVDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIAN 176 Y AV V RVG ADTVG ATPRQVY L R R VV DIE H HNDTG AIAN usage_00145.pdb 167 AYCALEAGATHIDTSILGIGERNGITPLGALLARYVTD-- 204 usage_00146.pdb 167 AYCALEAGATHIDTSILGIGERNGITPLGALLARYVTD-- 204 usage_00238.pdb 179 AYEAIEAGATHVDTTILGIGERNGITPLGGFLARMYTLQP 218 usage_00255.pdb 172 AYCALEAGATHIDTSILGIGERNGITPLGALLARMYVTD- 210 usage_00256.pdb 170 AYCALEAGATHIDTSILGIGERNGITPLGALLARMYVTD- 208 usage_00373.pdb 177 AYEAIEAGATHVDTTILGIGERNGITPLGGFLARMYTLQP 216 AY A EAGATH DT ILGIGERNGITPLG LAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################