################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:54 2021 # Report_file: c_1413_124.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00819.pdb # 2: usage_01143.pdb # 3: usage_01144.pdb # 4: usage_01145.pdb # # Length: 72 # Identity: 10/ 72 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 72 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 72 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00819.pdb 1 GCSEMLMAHAVTQLAS------RTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQ 54 usage_01143.pdb 1 -CAEMVMSKAVDTEAQ------NIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSK 53 usage_01144.pdb 1 GCAEMVMSKAVDTEAQ------NIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSK 54 usage_01145.pdb 1 ---GAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAM 57 em m av a GK a EafA ALr lPtiladNaGfDs lv usage_00819.pdb 55 L----------- 55 usage_01143.pdb 54 LRSSIYNG---- 61 usage_01144.pdb 55 LRSSIYNG---- 62 usage_01145.pdb 58 VEDELD-DAQDS 68 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################