################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:52 2021 # Report_file: c_0288_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00107.pdb # 2: usage_00108.pdb # 3: usage_00268.pdb # 4: usage_00303.pdb # 5: usage_00304.pdb # 6: usage_00305.pdb # 7: usage_00306.pdb # # Length: 135 # Identity: 23/135 ( 17.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/135 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/135 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 usage_00108.pdb 1 --RAGYLHLYGLNLVFDRVGKGPPVLLVAE---EASRWPEAL-----PEGYAFYLLDLPG 50 usage_00268.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 usage_00303.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 usage_00304.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 usage_00305.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 usage_00306.pdb 1 KIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRG 59 ehkmvavnGLNmhlaelGeGPtiLfihg lwysWrhq erGYravapDLrG usage_00107.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLF---- 115 usage_00108.pdb 51 YGRTEGP-R-----MAPEELAHFVAGFAVMMN--LGAPWVLLRGLGLALGPHLEALGLRA 102 usage_00268.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLF---- 115 usage_00303.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIALNEEKVFVVAHDLGAYIAWHLCLF---- 115 usage_00304.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIALNEEKVFVVAHDLGAYIAWHLCLF---- 115 usage_00305.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIALNEEKVFVVAHDLGAYIAWHLCLF---- 115 usage_00306.pdb 60 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIALNEEKVFVVAHDLGAYIAWHLCLF---- 115 YGdTtGa l fsilhLvgdVvalleaia eekvfVvahd Ga iawHLclf usage_00107.pdb 116 ----RPDKVKALVNL 126 usage_00108.pdb 103 LPAE----------- 106 usage_00268.pdb 116 ----RPDKVKALVNL 126 usage_00303.pdb 116 ----RPDKVKALVNL 126 usage_00304.pdb 116 ----RPDKVKALVNL 126 usage_00305.pdb 116 ----RPDKVKALVNL 126 usage_00306.pdb 116 ----RPDKVKALVNL 126 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################