################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:37:26 2021 # Report_file: c_0288_11.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00123.pdb # 2: usage_00124.pdb # 3: usage_00149.pdb # 4: usage_00150.pdb # 5: usage_00151.pdb # 6: usage_00200.pdb # 7: usage_00201.pdb # 8: usage_00202.pdb # 9: usage_00229.pdb # 10: usage_00376.pdb # 11: usage_00377.pdb # 12: usage_00378.pdb # 13: usage_00379.pdb # 14: usage_00380.pdb # 15: usage_00381.pdb # 16: usage_00423.pdb # # Length: 141 # Identity: 10/141 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/141 ( 24.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/141 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWPLDADMW-EYQMEY-LSSRG 46 usage_00124.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWPLDADMW-EYQMEY-LSSRG 46 usage_00149.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00150.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00151.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00200.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00201.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00202.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWLLDADMW-EYQMEY-LSSRG 46 usage_00229.pdb 1 T---QYI-EV-NGTRYAYRSLGAPS-----DIPLICFQHFTGTLDNWDPLITNG-LSK-G 48 usage_00376.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00377.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00378.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00379.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00380.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00381.pdb 1 ----STFVAK-DGTQIYFKDW--GS-----GKPVLFSHGWILDADMW-EYQMEY-LSSRG 46 usage_00423.pdb 1 -YIIKQLEIPFEKGKITAHLH--LTNTDKPHPVVIVSAGLDSLQTDM-WRLFRDHLAKHD 56 gt i s pv s g d w Ls g usage_00123.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00124.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00149.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00150.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00151.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00200.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00201.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00202.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00229.pdb 49 RQLIIFDNKGVGLSSGT---TPDNVA-ATADALEFITALG------IRYFDVLGFSLGGF 98 usage_00376.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00377.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00378.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00379.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00380.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00381.pdb 47 YRTIAFDRRGFGRSDQPW-T-GNDYDTFADDIAQLIEHLD------LKEVTLVGFSMGGG 98 usage_00423.pdb 57 IAMLTVDMPSVGYSS---KY-PLTE-DYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGN 111 i fD g G S d i L v l GFs GG usage_00123.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00124.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00149.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00150.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00151.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00200.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00201.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00202.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00229.pdb 99 IVQYAHIQ---PDIRKIIIVG 116 usage_00376.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00377.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00378.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00379.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00380.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00381.pdb 99 DVARYIARHGSARVAGLVLLG 119 usage_00423.pdb 112 AMVRLSFLEQEKIKA-CVILG 131 v r a v lG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################