################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:34:05 2021 # Report_file: c_0242_6.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00003.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00080.pdb # 5: usage_00081.pdb # 6: usage_00082.pdb # 7: usage_00086.pdb # 8: usage_00087.pdb # 9: usage_00088.pdb # 10: usage_00089.pdb # 11: usage_00090.pdb # 12: usage_00091.pdb # 13: usage_00092.pdb # 14: usage_00093.pdb # 15: usage_00094.pdb # 16: usage_00095.pdb # 17: usage_00096.pdb # 18: usage_00097.pdb # 19: usage_00098.pdb # 20: usage_00099.pdb # 21: usage_00100.pdb # # Length: 143 # Identity: 127/143 ( 88.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 127/143 ( 88.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/143 ( 11.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 GPHVRLWAKLEDRNPTGSI-DRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00071.pdb 1 ----RLWAKLEDRNPTGSI-DRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 55 usage_00072.pdb 1 ----RLWAKLEDRNPTGSI-DRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 55 usage_00080.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00081.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00082.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00086.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00087.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00088.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00089.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00090.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00091.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00092.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00093.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00094.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00095.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00096.pdb 1 GPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 60 usage_00097.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00098.pdb 1 ----RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 56 usage_00099.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 usage_00100.pdb 1 -PHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR 59 RLWAKLEDRNPTGSI DRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAAR usage_00003.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 usage_00071.pdb 56 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 115 usage_00072.pdb 56 LKGYRLICVMPENTSVERRQLLELYGAQIIFSA------TAVATAKELAATNPSWVMLYQ 109 usage_00080.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 116 usage_00081.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAA----NTAVATAKELAATNPSWVMLYQ 115 usage_00082.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAA---SNTAVATAKELAATNPSWVMLYQ 116 usage_00086.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFS-------TAVATAKELAATNPSWVMLYQ 109 usage_00087.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 usage_00088.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 usage_00089.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFS--------AVATAKELAATNPSWVMLYQ 111 usage_00090.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 116 usage_00091.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 116 usage_00092.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAG--SNTAVATAKELAATNPSWVMLYQ 114 usage_00093.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIF---------AVATAKELAATNPSWVMLYQ 110 usage_00094.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 usage_00095.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 116 usage_00096.pdb 61 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAA----NTAVATAKELAATNPSWVMLYQ 116 usage_00097.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIF---------AVATAKELAATNPSWVMLYQ 107 usage_00098.pdb 57 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 116 usage_00099.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 usage_00100.pdb 60 LKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQ 119 LKGYRLICVMPENTSVERRQLLELYGAQIIF AVATAKELAATNPSWVMLYQ usage_00003.pdb 120 YGNPANTDSHYCGTGPELLAD-- 140 usage_00071.pdb 116 YGNPANTDSHYCGTGPELLAD-- 136 usage_00072.pdb 110 YGNPANTDSHYCGTGPELLAD-- 130 usage_00080.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00081.pdb 116 YGNPANTDSHYCGTGPELLAD-- 136 usage_00082.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00086.pdb 110 YGNPANTDSHYCGTGPELLAD-- 130 usage_00087.pdb 120 YGNPANTDSHYCGTGPELLAD-- 140 usage_00088.pdb 120 YGNPANTDSHYCGTGPELLAD-- 140 usage_00089.pdb 112 YGNPANTDSHYCGTGPELLADL- 133 usage_00090.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00091.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00092.pdb 115 YGNPANTDSHYCGTGPELLAD-- 135 usage_00093.pdb 111 YGNPANTDSHYCGTGPELLAD-- 131 usage_00094.pdb 120 YGNPANTDSHYCGTGPELLAD-- 140 usage_00095.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00096.pdb 117 YGNPANTDSHYCGTGPELLAD-- 137 usage_00097.pdb 108 YGNPANTDSHYCGTGPELLAD-- 128 usage_00098.pdb 117 YGNPANTDSHYCGTGPELLADL- 138 usage_00099.pdb 120 YGNPANTDSHYCGTGPELLADLP 142 usage_00100.pdb 120 YGNPANTDSHYCGTGPELLAD-- 140 YGNPANTDSHYCGTGPELLAD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################