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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:48:30 2021
# Report_file: c_0422_9.html
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#====================================
# Aligned_structures: 8
#   1: usage_00011.pdb
#   2: usage_00012.pdb
#   3: usage_00019.pdb
#   4: usage_00026.pdb
#   5: usage_00027.pdb
#   6: usage_00034.pdb
#   7: usage_00038.pdb
#   8: usage_00039.pdb
#
# Length:         85
# Identity:        3/ 85 (  3.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      6/ 85 (  7.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 85 ( 24.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00011.pdb         1  GIFAFKVKDGPG-----GKEATWVVDVK---N-GKGSVLPNSD-K----KADCTITMADS   46
usage_00012.pdb         1  GIFAFKVKDGPG-----GKEATWVVDVK---N-GKGSVLPNSD-K----KADCTITMADS   46
usage_00019.pdb         1  HVYKFRITQ-GG-----KVVKNWVMDLK---N--VK-LVESD--D----AAEATLTMEDD   42
usage_00026.pdb         1  -IIVFNLKN-KA-----GKTESWYLDLK---N-DGD-VGKGN--KSPKGDADIQLTLSDD   46
usage_00027.pdb         1  -IIVFNLKN-KA-----GKTESWYLDLK---N-DGD-VGKGN--KSPKGDADIQLTLSDD   46
usage_00034.pdb         1  AVFEWHITK-GG-----NIGAKWTIDLK---S-GSGKVYQGPAKG----AADTTIILSDE   46
usage_00038.pdb         1  GSLALAVRP--DPKAGFPKGVAVVLDLWHGACRGAK-AVEGE--A----EADFVIEADLA   51
usage_00039.pdb         1  HVYKFRITQ-GG-----KVVKNWVMDLK---N--VK-LVESD--D----AAEATLTMEDD   42
                                                 w  D k                      A       d 

usage_00011.pdb        47  DLLALMTGKMNPQSAFFQGKLKITG   71
usage_00012.pdb        47  DFLALMTGKMNPQSAFFQGKLKITG   71
usage_00019.pdb        43  IMFAIGTGALPAKEAMAQDKMEVDG   67
usage_00026.pdb        47  HFQQLVEGKANAQRLFMTGKLKVKG   71
usage_00027.pdb        47  HFQQLVEGKANAQRLFMTGKLKVK-   70
usage_00034.pdb        47  DFMEVVLGKLDPQKAFFSGRLKARG   71
usage_00038.pdb        52  TWQEVLEGRLEPLSALMRGLLELKK   76
usage_00039.pdb        43  IMFAIGTGALPAKEAMAQDKMEVDG   67
                                  G                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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