################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:01:52 2021 # Report_file: c_1201_75.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00201.pdb # 2: usage_00204.pdb # 3: usage_00213.pdb # 4: usage_00214.pdb # 5: usage_00443.pdb # 6: usage_00612.pdb # 7: usage_00613.pdb # 8: usage_00614.pdb # 9: usage_00615.pdb # 10: usage_00616.pdb # 11: usage_00677.pdb # 12: usage_00678.pdb # 13: usage_00780.pdb # 14: usage_00781.pdb # 15: usage_00786.pdb # 16: usage_00787.pdb # 17: usage_00788.pdb # 18: usage_00789.pdb # 19: usage_00948.pdb # 20: usage_01103.pdb # 21: usage_01104.pdb # 22: usage_01218.pdb # 23: usage_01220.pdb # 24: usage_01221.pdb # 25: usage_01222.pdb # 26: usage_01248.pdb # 27: usage_01581.pdb # 28: usage_01714.pdb # 29: usage_01715.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 47 ( 6.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 47 ( 63.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00201.pdb 1 -------------TYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 33 usage_00204.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00213.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00214.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00443.pdb 1 ----------KYFTYLILNKGKIFKVGRQPRR-DGQNLVTMNLHITP 36 usage_00612.pdb 1 -------------TYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 33 usage_00613.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00614.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00615.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00616.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00677.pdb 1 -------------TYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 33 usage_00678.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00780.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00781.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00786.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00787.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00788.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00789.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_00948.pdb 1 -------DKITHYNYLILSKGKIIHFGTREKF-SDASYQSINIPVTQ 39 usage_01103.pdb 1 -------------TYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 33 usage_01104.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_01218.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_01220.pdb 1 -------------TYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 33 usage_01221.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_01222.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_01248.pdb 1 ----------AMDSYLI--D--PKRKLHVCGNNPT-CDGYEIEE--- 29 usage_01581.pdb 1 FTYGLLD---DGHLIAYPIPG---------RE-NAESPRLNFQWYWN 34 usage_01714.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 usage_01715.pdb 1 ----------RYYTYLIMNKGRLLKAGRQVRE-PGQDLVVLPLSITT 36 yli #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################