################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:28 2021 # Report_file: c_0081_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00035.pdb # 5: usage_00036.pdb # 6: usage_00041.pdb # 7: usage_00042.pdb # # Length: 193 # Identity: 71/193 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/193 ( 60.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/193 ( 3.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -SAVGEANVSLARDVNITGLHNVLDVAAE-YNVRLFVPSTIGAFGPTSPRNPAPDLCIQR 58 usage_00033.pdb 1 LSATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVME 60 usage_00034.pdb 1 LSATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVME 60 usage_00035.pdb 1 -SATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVME 59 usage_00036.pdb 1 LSATGEKAPQWAWNLNMTSLLNVLELARQTGLERVFWPSSIAAFGPTTPAGQTPQKTVME 60 usage_00041.pdb 1 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 60 usage_00042.pdb 1 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 60 SAt Ek p Aw lNm sL VL lA FwPSsIa FGPTtP tPq t me usage_00016.pdb 59 PRTIYGVSKVHTELMGEYYYYRYGLDFRCLRYPGIISA-DPG-GGTTDYAVQIFHAAAKN 116 usage_00033.pdb 61 PTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTG 120 usage_00034.pdb 61 PTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTG 120 usage_00035.pdb 60 PTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHAAVTG 119 usage_00036.pdb 61 PTTVYGISKQAGEGWCRWYHANHGVDVRSVRYPGLISHKTPP---TTDYAVDIFHAAVTG 117 usage_00041.pdb 61 PSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD 120 usage_00042.pdb 61 PSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD 120 P TvYGiSKqagE wc Yh GvDvRs RYPGlIS tPp TTDYAVdIF A usage_00016.pdb 117 GTFECNLEAGTRLPMMYISDCLRATLEVMEAPAERLSMR-TYNISAMSFTPEELAQALRK 175 usage_00033.pdb 121 EPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGSYNIAGMSFTPAQIAAAIRE 180 usage_00034.pdb 121 EPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGSYNIAGMSFTPAQIAAAIRE 180 usage_00035.pdb 120 EPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGSYNIAGMSFTPAQIAAAIRE 179 usage_00036.pdb 118 EPYTCFLKEDEALPMMYMPDAIRATIELMEAPADKLSERGSYNIAGMSFTPAQIAAAIRE 177 usage_00041.pdb 121 KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKK 180 usage_00042.pdb 121 KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKK 180 y CfL PMMYm Dai ATi M AP k sYN a MSFTP iA i usage_00016.pdb 176 HAPDFQITYCVDP 188 usage_00033.pdb 181 QVPGFQIRYEPDY 193 usage_00034.pdb 181 QVPGFQIRYEPDY 193 usage_00035.pdb 180 QVPGFQIRYEPDY 192 usage_00036.pdb 178 QVPGFQIRYEPDY 190 usage_00041.pdb 181 HIPEFTITYEPDF 193 usage_00042.pdb 181 HIPEFTITYEPDF 193 P F I YepD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################