################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:02:17 2021 # Report_file: c_0278_4.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00026.pdb # 9: usage_00027.pdb # 10: usage_00031.pdb # 11: usage_00039.pdb # 12: usage_00047.pdb # 13: usage_00049.pdb # 14: usage_00050.pdb # 15: usage_00051.pdb # 16: usage_00052.pdb # 17: usage_00055.pdb # 18: usage_00056.pdb # 19: usage_00060.pdb # 20: usage_00062.pdb # 21: usage_00063.pdb # 22: usage_00064.pdb # 23: usage_00067.pdb # 24: usage_00068.pdb # 25: usage_00069.pdb # 26: usage_00074.pdb # 27: usage_00075.pdb # 28: usage_00076.pdb # 29: usage_00077.pdb # 30: usage_00078.pdb # 31: usage_00080.pdb # 32: usage_00081.pdb # 33: usage_00082.pdb # 34: usage_00084.pdb # 35: usage_00091.pdb # 36: usage_00098.pdb # 37: usage_00099.pdb # 38: usage_00108.pdb # 39: usage_00112.pdb # 40: usage_00117.pdb # 41: usage_00122.pdb # 42: usage_00123.pdb # 43: usage_00124.pdb # # Length: 80 # Identity: 25/ 80 ( 31.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 80 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 80 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 RPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIC 60 usage_00012.pdb 1 RPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEIC 60 usage_00013.pdb 1 ---VTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGLGGFIKVRQYDQIPVEIC 57 usage_00015.pdb 1 ----------QLKEALLDTGADDTVLEDIALPGKWKPKMIGGIGGFIKVKQYENVSLEIG 50 usage_00016.pdb 1 ---VTIKVGGQLKEALLDTGADDTVLEDIALPGKWKPKMIGGIGGFIKVKQYENVSLEIG 57 usage_00017.pdb 1 RPIVTIKVEGQLREALLDTGADDTVLEDINLSGKWKPKIIGGIRGFVKVKQYEDILIEIC 60 usage_00018.pdb 1 RPIVTIKVEGQLREALLDTGADDTVLEDINLSGKWKPKIIGGIRGFVKVKQYEDILIEIC 60 usage_00026.pdb 1 RPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGAWKPKMIGGIGGFIKVRQYDQILIEIC 60 usage_00027.pdb 1 ----TIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIG 56 usage_00031.pdb 1 -PIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGIGGFVKVRQYDQVPIEIC 59 usage_00039.pdb 1 RPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEIC 60 usage_00047.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEE-NLP-GWKPK--IGGIGFIKVRQYDQIPVEI- 52 usage_00049.pdb 1 ----TVKVGGQLKEALLDTGADNTIFEDINLPGRWKPKMVGGIGGFLKVREYDQVPIEIA 56 usage_00050.pdb 1 ----TVKVGGQLKEALLNTGADNTIFEDINLPGRWKPKMVGGIGGFLKVREYDQVPIEIA 56 usage_00051.pdb 1 ---VTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIC 57 usage_00052.pdb 1 ---VTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEI- 56 usage_00055.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEE-NLP-GWKPK-IGGIGGFIKVRQYDQIPVEI- 53 usage_00056.pdb 1 RPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEIC 60 usage_00060.pdb 1 ---VTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00062.pdb 1 RPIVTIKVGGQLREALINTGADDTIFEEISLPGRWKPKLIGGIGGFMKVRQYDQIPIEIA 60 usage_00063.pdb 1 RPIVTIKVGGQLREALINTGADDTIFEEISLPGRWKPKLIGGIGGFMKVRQYDQIPIEIA 60 usage_00064.pdb 1 RPIVTIKVGGQLREALINTGADDTIFEEISLPGRWKPKLIGGIGGFMKVRQYDQIPIEIA 60 usage_00067.pdb 1 ---VTIRIGGQLKEALLNTGADNTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00068.pdb 1 ---VTIRIGGQLKEALLNTGADNTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00069.pdb 1 ---VTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00074.pdb 1 ----------QLKEALLNTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIC 50 usage_00075.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIG 57 usage_00076.pdb 1 RPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQIPIEIG 60 usage_00077.pdb 1 ---VTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00078.pdb 1 ---VTIRIGGQLKEALLDTGADDTIFEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00080.pdb 1 ---VTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGVGGFIKVRQYDQIPIEIC 57 usage_00081.pdb 1 ---VTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGVGGFIKVRQYDQIPIEIC 57 usage_00082.pdb 1 ---VTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00084.pdb 1 RPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 60 usage_00091.pdb 1 ---VTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 57 usage_00098.pdb 1 ---VTIRIGGQLKEALLNTGSDDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIL 57 usage_00099.pdb 1 ---VTIRIGGQLKEALLNTGSDFTVLEEMNLPGKWKPKMIRGIGGFIKVRQYDQIPVEIL 57 usage_00108.pdb 1 -----IRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIG 55 usage_00112.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEE-NLP-GWKPK-IGGIGGFIKVRQYDQIPVEI- 53 usage_00117.pdb 1 RPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEIC 60 usage_00122.pdb 1 ---VTIKVGGQLKEALLDTGADDTVLEDMELPGRWKPRMIGGIGGFVKVRQYDQIPIEIC 57 usage_00123.pdb 1 ---VTIKVGGQLKEALLDTGADDTVLEDMELPGRWKPRMIGGIGGFVKVRQYDQIPIEIC 57 usage_00124.pdb 1 RPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEIC 60 QL EAL TG D T E L WKP G GF KV Y EI usage_00011.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00012.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00013.pdb 58 GHKVIGTVLVGPTPVNIIGR 77 usage_00015.pdb 51 HKAIGTVLVGPTPV-NIIGR 69 usage_00016.pdb 58 HKAIGTVLVGPTPV-NIIGR 76 usage_00017.pdb 61 GHRAVGAVLVGPTPANIIGR 80 usage_00018.pdb 61 GHRAVGAVLVGPTPANIIGR 80 usage_00026.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00027.pdb 57 HKAIGTVLVGPTPV-NIIGR 75 usage_00031.pdb 60 GHKVIGTVLVGPTPTNVIGR 79 usage_00039.pdb 61 GHKAIGTVLVGPTPVNVIGR 80 usage_00047.pdb 53 GHKAIGTVLVGPTPVNIIGR 72 usage_00049.pdb 57 GHKVIGTVLVGPTPVNVIGR 76 usage_00050.pdb 57 GHKVIGTVLVGPTPVNVIGR 76 usage_00051.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00052.pdb 57 GHKAIGTVLVGPTPVNIIG- 75 usage_00055.pdb 54 GHKAIGTVLVGPTPVNIIGR 73 usage_00056.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00060.pdb 58 GHKAIGTVLVGPTPTNVIGR 77 usage_00062.pdb 61 GHKAIGTVLVGPTPINVIGR 80 usage_00063.pdb 61 GHQAIGTVLVGPTPINVIGR 80 usage_00064.pdb 61 GHQAIGTVLVGPTPINVIGR 80 usage_00067.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00068.pdb 58 GHKAIGTVLVGPTPVNIIG- 76 usage_00069.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00074.pdb 51 GHKAIGTVLVGPTPANIIGR 70 usage_00075.pdb 58 HKAIGTVLVGPTPV-NIIGR 76 usage_00076.pdb 61 HKVIGTVLVGPTPT-NVIGR 79 usage_00077.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00078.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00080.pdb 58 GHKVIGTVLVGPTPVNIIGR 77 usage_00081.pdb 58 GHKVIGTVLVGPTPVNIIGR 77 usage_00082.pdb 58 GHKVIGTVLVGPTPVNIIGR 77 usage_00084.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00091.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00098.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00099.pdb 58 GHKAIGTVLVGPTPVNIIGR 77 usage_00108.pdb 56 HKAIGTVLVGPTPV-NIIGR 74 usage_00112.pdb 54 GHKAIGTVLVGPTPVNIIGR 73 usage_00117.pdb 61 GHKAIGTVLVGPTPVNIIGR 80 usage_00122.pdb 58 GHKVIGTVLVGPTPTNIIGR 77 usage_00123.pdb 58 GHKVIGTVLVGPTPTNIIGR 77 usage_00124.pdb 61 GHKAIGTVLVGPTPVNIIG- 79 N IG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################