################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:27:53 2021 # Report_file: c_1200_302.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00188.pdb # 2: usage_00195.pdb # 3: usage_00200.pdb # 4: usage_00222.pdb # 5: usage_00225.pdb # 6: usage_00232.pdb # 7: usage_00242.pdb # 8: usage_00275.pdb # 9: usage_00475.pdb # 10: usage_00816.pdb # 11: usage_00845.pdb # 12: usage_00859.pdb # 13: usage_00879.pdb # 14: usage_00880.pdb # 15: usage_00887.pdb # 16: usage_00894.pdb # 17: usage_00903.pdb # 18: usage_01560.pdb # 19: usage_02506.pdb # 20: usage_02707.pdb # 21: usage_03270.pdb # 22: usage_03294.pdb # 23: usage_03352.pdb # 24: usage_03617.pdb # 25: usage_03766.pdb # 26: usage_04101.pdb # 27: usage_04587.pdb # 28: usage_04598.pdb # 29: usage_04687.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 45 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 45 ( 68.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFT-- 29 usage_00195.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_00200.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00222.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_00225.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00232.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00242.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00275.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFT-- 29 usage_00475.pdb 1 -------ENVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 32 usage_00816.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00845.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_00859.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_00879.pdb 1 -------ENVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 31 usage_00880.pdb 1 -------KVSYYQLQT-----RSADHP-LTTFCTCEACGNRWKFS 32 usage_00887.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_00894.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_00903.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_01560.pdb 1 -------MLYPREDK-----------ENNRLLFECRTCSYVEE-- 25 usage_02506.pdb 1 -------NARVRLRTK----------RMPHVVITCLECGYIMRYP 28 usage_02707.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_03270.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_03294.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_03352.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_03617.pdb 1 --------AYFFQL-QIRSAD-----EPMTTFYKCVNCGHRWKE- 30 usage_03766.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_04101.pdb 1 KSVRQRDKKASVLYIE---GH-----NPKKGFTVS---------- 27 usage_04587.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 usage_04598.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTS- 30 usage_04687.pdb 1 --------NVFFQSQQ-RRKD-----TSMVLFFVCLSCSHIFTSD 31 c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################