################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:11 2021 # Report_file: c_0239_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00022.pdb # 8: usage_00023.pdb # 9: usage_00026.pdb # 10: usage_00028.pdb # 11: usage_00029.pdb # 12: usage_00030.pdb # 13: usage_00031.pdb # # Length: 103 # Identity: 28/103 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/103 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/103 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 IDQYAVFGNP----SKSPFIHTLFARQTQQSMIYTAQCVP-DGFTEAAKHFFAQGGRGCN 55 usage_00009.pdb 1 -DQYAVFGN----HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 55 usage_00010.pdb 1 -DQYAVFGNPIN-HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 58 usage_00011.pdb 1 -DQYAVFGNPIN-HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 58 usage_00012.pdb 1 -DLYAVWGNPIA-QSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCN 58 usage_00013.pdb 1 -DLYAVWGNPIA-QSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCN 58 usage_00022.pdb 1 -DQYVVFGNPIG-HSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFK-QGSGGN 57 usage_00023.pdb 1 -DQYVVFGNPIG-HSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFK-QGSGGN 57 usage_00026.pdb 1 -DQYAVFGNP-INHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 58 usage_00028.pdb 1 -DQYAVFGNPIN-HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 58 usage_00029.pdb 1 -DQYAVFGN----HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 55 usage_00030.pdb 1 -DQYAVFGNPIN-HSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCN 58 usage_00031.pdb 1 -DRYAVIGRPIN-HTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMN 58 D Y V Gn sKSP I A qt Q Y D F Ff G N usage_00008.pdb 56 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 96 usage_00009.pdb 56 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 96 usage_00010.pdb 59 VTVPFKEEAYRFADRLTERARLAGAVNTLKKDDGEILGDN--- 98 usage_00011.pdb 59 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 99 usage_00012.pdb 59 ITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADN-- 99 usage_00013.pdb 59 ITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADN-- 99 usage_00022.pdb 58 VTVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDN-- 98 usage_00023.pdb 58 VTVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDN-- 98 usage_00026.pdb 59 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 99 usage_00028.pdb 59 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 99 usage_00029.pdb 56 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDN-- 96 usage_00030.pdb 59 VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD 101 usage_00031.pdb 59 ITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAEN--- 98 T PFKe A D RA A A NtL k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################