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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:41 2021
# Report_file: c_1305_11.html
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#====================================
# Aligned_structures: 8
#   1: usage_00541.pdb
#   2: usage_00542.pdb
#   3: usage_00543.pdb
#   4: usage_00544.pdb
#   5: usage_00547.pdb
#   6: usage_00719.pdb
#   7: usage_00720.pdb
#   8: usage_01269.pdb
#
# Length:         64
# Identity:       51/ 64 ( 79.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     51/ 64 ( 79.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/ 64 ( 20.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00541.pdb         1  SAEDIDVLFEPRYHIAPDES----H---R---MIDERPLGPLLYGSRLDPYMRLDPYFTS   50
usage_00542.pdb         1  SAEDIDVLFEPRYHIAPDES----H------RMIDERPLGPLLYGSRLDPYMRLDPYFTS   50
usage_00543.pdb         1  -AEDIDVLFEPRYHIAPDES----H-------MIDERPLGPLLYGSRLDPYMRLDPYFTS   48
usage_00544.pdb         1  -AEDIDVLFEPRYHIAPDES------------MIDERPLGPLLYGSRLDPYMRLDPYFTS   47
usage_00547.pdb         1  SAEDIDVLFEPRYHIAPDESARFA----TIQRMIDERPLGPLLYGSRLDPYMRLDPYFTS   56
usage_00719.pdb         1  -AEDIDVLFEPRYHIAPDES------------MIDERPLGPLLYGSRLDPYMRLDPYFTS   47
usage_00720.pdb         1  SAEDIDVLFEPRYHIAPDES----HLPATIQRMIDERPLGPLLYGSRLDPYMRLDPYFTS   56
usage_01269.pdb         1  SAEDIDVLFEPRYHIAPDES--------TIQRMIDERPLGPLLYGSRLDPYMRLDPYFTS   52
                            AEDIDVLFEPRYHIAPDES            MIDERPLGPLLYGSRLDPYMRLDPYFTS

usage_00541.pdb        51  VPQD   54
usage_00542.pdb        51  VPQD   54
usage_00543.pdb        49  VPQD   52
usage_00544.pdb        48  VPQD   51
usage_00547.pdb        57  VPQD   60
usage_00719.pdb        48  VPQD   51
usage_00720.pdb        57  VPQD   60
usage_01269.pdb        53  VPQD   56
                           VPQD


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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