################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:16 2021 # Report_file: c_0431_10.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00126.pdb # 7: usage_00139.pdb # 8: usage_00140.pdb # 9: usage_00141.pdb # 10: usage_00142.pdb # # Length: 108 # Identity: 53/108 ( 49.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/108 ( 60.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/108 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -DQVIPVAGRDS-LLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRER 58 usage_00011.pdb 1 -DQVIPVAGRDS-LLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRER 58 usage_00012.pdb 1 -DQVIPVAGRDS-LLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRER 58 usage_00013.pdb 1 -DQVIPVAGRDS-LLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRER 58 usage_00014.pdb 1 -DQVIPVAGRDS-LLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRER 58 usage_00126.pdb 1 -RQVIPV-AGRDSLLNLCGAHAPYFTRNLVILDDSSGHTGVGEVPGGEGIRHALER-TDL 57 usage_00139.pdb 1 EMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPGGEGIRQALERVIPL 60 usage_00140.pdb 1 EMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPGGEGIRQALERVIPL 60 usage_00141.pdb 1 EMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPGGEGIRQALERVIPL 60 usage_00142.pdb 1 EMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPGGEGIRQALERVIPL 60 QVIPV grds LLNLCGAHAP FTRNLV LkDnaGrTG GEVPGGEGIRqALER usage_00010.pdb 59 VIGQSVGRYNRVLNDLRQAIA----LRLDNVITAVEAALLDLLGQHL- 101 usage_00011.pdb 59 VIGQSVGRYNRVLNDLRQAIA----LRLDNVITAVEAALLDLLGQHL- 101 usage_00012.pdb 59 VIGQSVGRYNRVLNDLRQAIA----LRLDNVITAVEAALLDLLGQHL- 101 usage_00013.pdb 59 VIGQSVGRYNRVLNDLRQAIA----RLDNVITAVEAALLDLLGQ-HL- 100 usage_00014.pdb 59 VIGQSVGRYNRVLNDLRQAIA----LRLDNVITAVEAALLDLLGQHL- 101 usage_00126.pdb 58 VVGQSIGRYQATLNAVRAALS----RLDNVITAIEAALLDLLGQ-HL- 99 usage_00139.pdb 61 VVGQSIGRTNGVLSSIRRALA----RMDNVITAVEAALLDLLGQ-FL- 102 usage_00140.pdb 61 VVGQSIGRTNGVLSSIRRALAEINLRMDNVITAVEAALLDLLGQ-FLE 107 usage_00141.pdb 61 VVGQSIGRTNGVLSSIRRALA----RMDNVITAVEAALLDLLGQ-FLE 103 usage_00142.pdb 61 VVGQSIGRTNGVLSSIRRALA----RMDNVITAVEAALLDLLGQ-FLE 103 V GQS GR n vL R A a A L L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################