################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:14:11 2021 # Report_file: c_0277_10.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00021.pdb # 2: usage_00032.pdb # 3: usage_00039.pdb # 4: usage_00094.pdb # 5: usage_00095.pdb # 6: usage_00104.pdb # 7: usage_00110.pdb # 8: usage_00116.pdb # 9: usage_00117.pdb # 10: usage_00118.pdb # 11: usage_00143.pdb # 12: usage_00145.pdb # 13: usage_00146.pdb # 14: usage_00150.pdb # 15: usage_00160.pdb # 16: usage_00161.pdb # 17: usage_00164.pdb # 18: usage_00165.pdb # 19: usage_00176.pdb # 20: usage_00179.pdb # 21: usage_00180.pdb # 22: usage_00199.pdb # 23: usage_00203.pdb # 24: usage_00205.pdb # 25: usage_00214.pdb # 26: usage_00215.pdb # 27: usage_00226.pdb # 28: usage_00238.pdb # 29: usage_00240.pdb # 30: usage_00243.pdb # 31: usage_00244.pdb # 32: usage_00252.pdb # 33: usage_00259.pdb # 34: usage_00260.pdb # 35: usage_00264.pdb # 36: usage_00265.pdb # 37: usage_00267.pdb # 38: usage_00277.pdb # # Length: 110 # Identity: 15/110 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/110 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/110 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -VQLLESGPGLLKPSETLSLTCTVSGGSM-I--NYYWSWIRQPPGERPQWLGHIIY-GGT 55 usage_00032.pdb 1 -VQLQESGPGVVKSSETLSLTCTVSGG---G--GTYWSWLRLSPGKGLEWIGYIFH-TGE 53 usage_00039.pdb 1 QMQLQESGPGLVKPSETLSLTCSVSGASI-S--DSYWSWIRRSPGKGLEWIGYVHK-SGD 56 usage_00094.pdb 1 QVQLQESGPGLVKPSETLSLTCVVSGGSF-S--SYYWTWIRQSPGKGLEWIGEMNGNSGY 57 usage_00095.pdb 1 QVQLQESGPGLVKPSETLSLTCVVS-F---S--SYYWTWIRQSPGKGLEWIGEMNGNSGY 54 usage_00104.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S--SYYWSWIRQPPGKGLEWIGYIYY-SGS 54 usage_00110.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSI-TS-GYYWNWIRLFPGNKLEWVGYISN-VGD 57 usage_00116.pdb 1 QVQLQESGPGLVKPSETLSLTCSVSGASI-S--DHYWSWIRQSPGKGLEWIGYVYD-SGD 56 usage_00117.pdb 1 --QLQESGPGLVKPSETLSLTCSVSGASI-S--DHYWSWIRQSPGKGLEWIGYVYD-SGD 54 usage_00118.pdb 1 --QLQESGPGLVKPSETLSVTCIVSGGSI-S--NYYWTWIRQSPGKGLEWIGYISD-RET 54 usage_00143.pdb 1 QVQLQESGPGLVKPSETLSVTCAVSGVSF-S--SFWWGWIRQSPGKGLEWIGTIYGSSGR 57 usage_00145.pdb 1 EVQLVESGPSLVKPSQTLSLTCSVTGDSI-T--SGFWNWIRKFPGNKLEFMGYITY-SGT 56 usage_00146.pdb 1 EVQLVESGPSLVKPSQTLSLTCSVTGDSI-T--SGFWNWIRKFPGNKLEFMGYITY-SGT 56 usage_00150.pdb 1 -LQLQESGLGLVKPSETLSLTCTVSGDSV-SSGSYYWSWLRQPPGKGLEWIGNMHG-SGH 57 usage_00160.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S--GFHWSWIRQPPGKGLEYIGYIYY-SGS 54 usage_00161.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S--GFHWSWIRQPPGKGLEYIGYIYY-SGS 54 usage_00164.pdb 1 --QLQESGPGLVRPSETLSVTCIVSGGSI-S--NYYWTWIRQSPGKGLEWIGYISD-RET 54 usage_00165.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVSGYSI-TG-GYSWHWIRQPPGKGLEWMGYIHY-SGY 57 usage_00176.pdb 1 -VQLQESGPGLVKPAETLSLTCSVSGESI-NTGHYYWGWVRQVPGKGLEWIGHIHY-TTA 57 usage_00179.pdb 1 -VKLQESGAGLVQPSQSLSLTCSVTGYSI-TS-GYYWNWIRLFPGNKLEWVGYISN-VGD 56 usage_00180.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSI-TS-GYYWNWIRLFPGNKLEWVGYISN-VGD 57 usage_00199.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGFSL-I--GYDLNWIRQPPGKGLEWIGIIWG-DGT 55 usage_00203.pdb 1 --QLLESGPGLLKPSETLSLTCTVSGGSM-I--NYYWSWIRQPPGERPQWLGHIIY-GGT 54 usage_00205.pdb 1 -LQLQESGPGLVKPSETLSLTCAVSGGSI-S--NNHWSWIRQPPGKGLEWIGLISGSGGS 56 usage_00214.pdb 1 -MQLQESGPGLVKPSETLSLTCSVSGASI-S--DSYWSWIRRSPGKGLEWIGYVHK-SGD 55 usage_00215.pdb 1 -MQLQESGPGLVKPSETLSLTCSVSGASI-S--DSYWSWIRRSPGKGLEWIGYVHK-SGD 55 usage_00226.pdb 1 --QLQESGPGLVRPSETLSVTCIVSGGSI-S--NYYWTWIRQSPGKGLEWIGYISD-RET 54 usage_00238.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGFS-LT--SYIVDWIRQPPGKGLEWIGVIWA-GGS 56 usage_00240.pdb 1 -VKLQESGPGKLQPSQTLSLTCSFSGFSL-TTSGIGVGWIRQPSGKGLEWLAHIWW-SAS 57 usage_00243.pdb 1 -VQLVESGPGLVKPSDILSLTCAVSGYSI-SS-NYYWGWIRQPPGKGLEWIGSIYH-SGS 56 usage_00244.pdb 1 -VQLVESGPGLVKPSDILSLTCAVSGYSI-SS-NYYWGWIRQPPGKGLEWIGSIYH-SGS 56 usage_00252.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSI-S--NYYWSWIRQSPGKGLEWIGYISD-SES 56 usage_00259.pdb 1 -VTLKESGPTLVKPTQTLTLTCTFSGFSL-RTSRVGVSWIRQPPGKALEWLAHIYW-DDD 57 usage_00260.pdb 1 -VTLKESGPTLVKPTQTLTLTCTFSGFSL-RTSRVGVSWIRQPPGKALEWLAHIYW-DDD 57 usage_00264.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S--GFHWSWIRQPPGKGLEYIGYIYY-SGS 54 usage_00265.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSI-S--GFHWSWIRQPPGKGLEYIGYIYY-SGS 54 usage_00267.pdb 1 QVQLQESGPGLVRPSETLSVTCIVSGGSI-S--NYYWTWIRQSPGKGLEWIGYISD-RET 56 usage_00277.pdb 1 QVQLQESGPGLVKPSETLSVTCSVSGDSM-N--NYYWTWIRQSPGKGLEWIGYISD-RES 56 L ESG p L TC W R pG usage_00021.pdb 56 TKYNPSLESRITISRDISKN-QFSLRLNSVTAADTAIYYCARVAIGV--- 101 usage_00032.pdb 54 TNYSPSLKGRVSISVDTSED-QFSLRLRSVTAADTAVYFCASLP------ 96 usage_00039.pdb 57 TNYSPSLKSRVNLSLDTSKN-QVSLSLVAATAADSGKYYCARTLHGR--- 102 usage_00094.pdb 58 TNYNPSLQSRVTISKD---N-QFSLKLTSLTAADTAVYYCARDA------ 97 usage_00095.pdb 55 TNYNPSLQSRVTISKDA--KNQFSLKLTSLTAADTAVYYCARDA------ 96 usage_00104.pdb 55 TNYNPSLKSRVTISVDTSKN-QFSLKLSSVTAADTAVYYCARTLHGRRIY 103 usage_00110.pdb 58 NNYNPSLKDRLSITRDTSKN-QFFLKLNSVTTEDTATYYCARSEYY---- 102 usage_00116.pdb 57 TNYNPSLKSRVNLSLDTSKN-QVSLSLTAVTAADSAIYYCARTQHGR--- 102 usage_00117.pdb 55 TNYNPSLKSRVNLSLDTSKN-QVSLSLTAVTAADSAIYYCARTQHGRRIY 103 usage_00118.pdb 55 TTYNPSLKSRVVISRDTSKN-QLSLKLNSVTAADTAIYYCATARRGQRIY 103 usage_00143.pdb 58 GEYNPSLKSRTTISRDTSKS-QISLELTSVTAADTAIYYCS--------- 97 usage_00145.pdb 57 SYYKPSLKSRISITRDTSKN-QYFLQLNSVTAEDTATYYCARRG------ 99 usage_00146.pdb 57 SYYKPSLKSRISITRDTSKN-QYFLQLNSVTAEDTATYYCARRG------ 99 usage_00150.pdb 58 TNYNPSLKSRVTITPDTSKN-HFSLRLSSVTAADTAVYYCARALL----- 101 usage_00160.pdb 55 TSYNPSLKSRVSMSVDTSRN-QFSLELSSVTAADTAVYYCARDFG----- 98 usage_00161.pdb 55 TSYNPSLKSRVSMSVDTSRN-QFSLELSSVTAADTAVYYCARDFG----- 98 usage_00164.pdb 55 TTYNPSLNSRAVISRDTSKN-QLSLQLRSVTTADTAIYFCATARRGQRIY 103 usage_00165.pdb 58 TDFNPSLKTRITISRDTSKN-QFSLKLSSVTAVDTAVYYCARKDP----- 101 usage_00176.pdb 58 VLHNPSLKSRLTIKIYTLRN-QITLRLSNVTAADTAVYHCVRSGG----- 101 usage_00179.pdb 57 NNYNPSLKDRLSITRDTSKN-QFFLKLNSVTTEDTATYYCARSEYY---- 101 usage_00180.pdb 58 NNYNPSLKDRLSITRDTSKN-QFFLKLNSVTTEDTATYYCARSEYY---- 102 usage_00199.pdb 56 TDYNSAVKSRVTISKDTSKN-QFSLKLSSVTAADTAVYYCARGGYW---- 100 usage_00203.pdb 55 TKYNPSLESRITISRDISKN-QFSLRLNSVTAADTAIYYCARVAIGV--- 100 usage_00205.pdb 57 TDYNPSLKSRVTISTDTSKN-QFSLKLSSVTAADTAVYYCA--------- 96 usage_00214.pdb 56 TNYSPSLKSRVNLSLDTSKN-QVSLSLVAATAADSGKYYCARTLHGR--- 101 usage_00215.pdb 56 TNYSPSLKSRVNLSLDTSKN-QVSLSLVAATAADSGKYYCARTLHGR--- 101 usage_00226.pdb 55 TTYNPSLNSRAVISRDTSKN-QLSLQLRSVTTADTAIYFCATARRGQRIY 103 usage_00238.pdb 57 TGYNSALRSRVSITKDTSKN-QFSLKLSSVTAADTAVYYCASAA------ 99 usage_00240.pdb 58 KYYNTALKSRLTISKDTSNN-QVFLKIASVDTADTATYYCARAYY----- 101 usage_00243.pdb 57 TYYKPSLESRLGISVDTSKN-QFSLKLSFVSAADTAVYYCARHVR----- 100 usage_00244.pdb 57 TYYKPSLESRLGISVDTSKN-QFSLKLSFVSAADTAVYYCARHVR----- 100 usage_00252.pdb 57 TNYNPSLKSRVIISVDTSKN-QLSLKLNSVTAADSAIYYCARAQQGKRIY 105 usage_00259.pdb 58 KRYNPSLKSRLTISKDTSKN-QVVLTMTNMDPVDTATYYCARRGFY--G- 103 usage_00260.pdb 58 KRYNPSLKSRLTISKDTSKN-QVVLTMTNMDPVDTATYYCARRGFY--G- 103 usage_00264.pdb 55 TSYNPSLKSRVSMSVDTSRN-QFSLELSSVTAADTAVYYCARDFGEY-HY 102 usage_00265.pdb 55 TSYNPSLKSRVSMSVDTSRN-QFSLELSSVTAADTAVYYCARDFGEY-HY 102 usage_00267.pdb 57 TTYNPSLNSRAVISRDTSKN-QLSLQLRSVTTADTAIYFCATARRGQRIY 105 usage_00277.pdb 57 ATYNPSLNSRVVISRDTSKN-QLSLKLNSVTPADTAVYYCATARRGQRIY 105 l R d q L D Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################