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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:16:16 2021
# Report_file: c_0277_6.html
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#====================================
# Aligned_structures: 10
#   1: usage_00041.pdb
#   2: usage_00042.pdb
#   3: usage_00043.pdb
#   4: usage_00081.pdb
#   5: usage_00082.pdb
#   6: usage_00198.pdb
#   7: usage_00200.pdb
#   8: usage_00201.pdb
#   9: usage_00202.pdb
#  10: usage_00262.pdb
#
# Length:        109
# Identity:       50/109 ( 45.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     52/109 ( 47.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/109 ( 19.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00041.pdb         1  VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGNTGYNP   60
usage_00042.pdb         1  VQLRESGPSLVQPSQTLSLTCTASGFS---KAVGWVRQAPGKALEWLGSIDTGGSTGYNP   57
usage_00043.pdb         1  VQLRESGPSLVQPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGSTGYNP   60
usage_00081.pdb         1  -QLKESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA   59
usage_00082.pdb         1  ---KESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA   57
usage_00198.pdb         1  VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGTAGYNP   60
usage_00200.pdb         1  VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYNP   60
usage_00201.pdb         1  -QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYNP   59
usage_00202.pdb         1  -QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPEKALEWLGSIDTSGTTGYNS   59
usage_00262.pdb         1  VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGTAGYNP   60
                               ESGP LV PSQ LS TCT SGFS     V WVRQ PgK LEWLG I  gG   YN 

usage_00041.pdb        61  GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTSVHQETKKYQSCPD  109
usage_00042.pdb        58  GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVHQETRK------  100
usage_00043.pdb        61  GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVHQETRKTC----  105
usage_00081.pdb        60  AFISRLSISKDNSKSHVFFKMNSLQANDTAIYYC---------------   93
usage_00082.pdb        58  AFISRLSISKDNSKSHVFFKMNSLQANDTAIYYC---------------   91
usage_00198.pdb        61  GLKTRLSITKDNSKSQVSLTVSSVATEDSATYYCVTVYQKT--------  101
usage_00200.pdb        61  GLKSRLSITKDNSKNQVSLSVSSATAEDSATYYCTTVHQKTLEVRSC--  107
usage_00201.pdb        60  GLKSRLSITKDNSKNQVSLSVSSATAEDSATYYC---------------   93
usage_00202.pdb        60  GLKSRLSIIKDNSKSQVSLSVSSVTTEDSATYYCTIVHQET--------  100
usage_00262.pdb        61  GLKTRLSITKDNSKSQVSLTVSSVATEDSATYYCVTVYQKT--------  101
                               RLSI KDNSK  V     S    D A YYC               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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