################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:21 2021 # Report_file: c_1417_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00136.pdb # 2: usage_00137.pdb # 3: usage_00138.pdb # 4: usage_00937.pdb # 5: usage_01333.pdb # 6: usage_01334.pdb # 7: usage_01335.pdb # # Length: 70 # Identity: 25/ 70 ( 35.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 70 ( 85.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 70 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 -RGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 59 usage_00137.pdb 1 --GYVLRRILHRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 58 usage_00138.pdb 1 --GYVLRRILHRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 58 usage_00937.pdb 1 GRGYVIRRILRRAMRFGYK-LGIENPFLYKGVDLVVDIMKEPYPELELSREFVKGIVKGE 59 usage_01333.pdb 1 --GYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 58 usage_01334.pdb 1 --GYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 58 usage_01335.pdb 1 --GYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEE 58 GYVlRRIL RAvRyahe LnasrgFfatlVDvVVqslgdafPELkkdpdmVKdIineE usage_00136.pdb 60 EVQF------ 63 usage_00137.pdb 59 EVQFLKTLSR 68 usage_00138.pdb 59 EVQFL----- 63 usage_00937.pdb 60 EKRF------ 63 usage_01333.pdb 59 EVQF------ 62 usage_01334.pdb 59 EVQF------ 62 usage_01335.pdb 59 EVQF------ 62 EvqF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################