################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:00 2021 # Report_file: c_0633_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00025.pdb # 2: usage_00043.pdb # 3: usage_00060.pdb # 4: usage_00174.pdb # 5: usage_00213.pdb # 6: usage_00214.pdb # 7: usage_00227.pdb # # Length: 126 # Identity: 12/126 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/126 ( 18.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/126 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 --ESFDVGCNLFAKFSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEI-DPDSAE 57 usage_00043.pdb 1 -----------FAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSA-- 47 usage_00060.pdb 1 ----------IFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSA-- 48 usage_00174.pdb 1 DKEVATLIENLYVKLKLMLVKKDE----AKNNALLSHLRKINDHLSAR------------ 44 usage_00213.pdb 1 ---------NIFGTFGTFLKSKDSN-D-GSEHALLVELEALENHLKSH------------ 37 usage_00214.pdb 1 -------GSKIFPSFVKFLKSKDAS-D-GSEKALLDELQALDEHLKAH------------ 39 usage_00227.pdb 1 -----------FAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSA-- 47 f f k e LL l l L usage_00025.pdb 58 EP-PVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYARE 116 usage_00043.pdb 48 EDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYARE 107 usage_00060.pdb 49 EDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYARE 108 usage_00174.pdb 45 ------NTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLD 98 usage_00213.pdb 38 ------DGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLD 91 usage_00214.pdb 40 -------GPYISGENVSAADLSLGPKLFHLQVALEHFKGWKIPENLTSVHAYTKALFSRE 92 usage_00227.pdb 48 EDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYARE 107 f G D L PkL V iP v Y usage_00025.pdb 117 EFTHTC 122 usage_00043.pdb 108 EFASTC 113 usage_00060.pdb 109 EFASTC 114 usage_00174.pdb 99 AFTQSC 104 usage_00213.pdb 92 SFEKT- 96 usage_00214.pdb 93 SFVKT- 97 usage_00227.pdb 108 EFASTC 113 F t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################