################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:54:58 2021 # Report_file: c_0411_2.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00018.pdb # 9: usage_00019.pdb # 10: usage_00020.pdb # 11: usage_00021.pdb # 12: usage_00022.pdb # 13: usage_00023.pdb # 14: usage_00024.pdb # 15: usage_00025.pdb # 16: usage_00029.pdb # 17: usage_00030.pdb # 18: usage_00031.pdb # 19: usage_00032.pdb # 20: usage_00033.pdb # 21: usage_00034.pdb # 22: usage_00035.pdb # 23: usage_00036.pdb # 24: usage_00037.pdb # 25: usage_00038.pdb # 26: usage_00044.pdb # 27: usage_00045.pdb # 28: usage_00046.pdb # 29: usage_00047.pdb # 30: usage_00048.pdb # 31: usage_00051.pdb # 32: usage_00052.pdb # 33: usage_00055.pdb # 34: usage_00056.pdb # 35: usage_00057.pdb # 36: usage_00060.pdb # # Length: 102 # Identity: 22/102 ( 21.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/102 ( 61.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/102 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00005.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00010.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00011.pdb 1 VGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 59 usage_00012.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00013.pdb 1 VGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 59 usage_00014.pdb 1 ----LLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 55 usage_00018.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00019.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00020.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00021.pdb 1 ----LLNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 55 usage_00022.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00023.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00024.pdb 1 IGRCLLNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDANGKP-HKLRLYSI 59 usage_00025.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDANGKP-HKLRLYSI 54 usage_00029.pdb 1 ----LLNTRITGDQAPGETWHMVFSTEGEVPYREGQSIGVIADGEDKNGKP-HKLRLYSI 55 usage_00030.pdb 1 VGRCLLNTRITGDQAPGETWHMVFSTEGEVPYREGQSIGVIADGEDKNGKP-HKLRLYSI 59 usage_00031.pdb 1 -----SNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKP-HKLRLYSI 54 usage_00032.pdb 1 -----SNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKP-HKLRLYSI 54 usage_00033.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00034.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00035.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00036.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00037.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00038.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGKIPYREGQSIGVIADGVDKNGKP-HKVRLYSI 54 usage_00044.pdb 1 ----LLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 55 usage_00045.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00046.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00047.pdb 1 VGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 59 usage_00048.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00051.pdb 1 -----LNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 54 usage_00052.pdb 1 VGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKP-HKLRLYSI 59 usage_00055.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00056.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYSI 54 usage_00057.pdb 1 -----LNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKP-HKLRLYVI 54 usage_00060.pdb 1 KCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPY-YNE----QRCARLYSI 55 nt itgd aPgEtwHmvfs eG pYrEGqs G d d hk RLYsI usage_00004.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00005.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00010.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00011.pdb 60 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 101 usage_00012.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00013.pdb 60 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 101 usage_00014.pdb 56 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 97 usage_00018.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00019.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00020.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00021.pdb 56 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 97 usage_00022.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00023.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00024.pdb 60 ASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDL 101 usage_00025.pdb 55 ASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDL 96 usage_00029.pdb 56 ASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDL 97 usage_00030.pdb 60 ASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDL 101 usage_00031.pdb 55 ASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDL 96 usage_00032.pdb 55 ASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDL 96 usage_00033.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00034.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00035.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00036.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00037.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00038.pdb 55 ASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDL 96 usage_00044.pdb 56 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 97 usage_00045.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00046.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00047.pdb 60 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 101 usage_00048.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00051.pdb 55 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 96 usage_00052.pdb 60 ASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDL 101 usage_00055.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00056.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00057.pdb 55 ASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDL 96 usage_00060.pdb 56 SSSNNM-----ENLSVAIKIHKYE-----TNYGYCSGFIKNL 87 aSSa g k vSlcvKrl Yt kGvCSnFlcdL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################