################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:07:01 2021 # Report_file: c_1372_16.html ################################################################################################ #==================================== # Aligned_structures: 37 # 1: usage_00065.pdb # 2: usage_00066.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00611.pdb # 7: usage_00612.pdb # 8: usage_00613.pdb # 9: usage_00617.pdb # 10: usage_00618.pdb # 11: usage_00620.pdb # 12: usage_00621.pdb # 13: usage_00622.pdb # 14: usage_00623.pdb # 15: usage_00624.pdb # 16: usage_00625.pdb # 17: usage_00626.pdb # 18: usage_00627.pdb # 19: usage_00628.pdb # 20: usage_01142.pdb # 21: usage_01176.pdb # 22: usage_01177.pdb # 23: usage_01178.pdb # 24: usage_01179.pdb # 25: usage_01180.pdb # 26: usage_01181.pdb # 27: usage_01285.pdb # 28: usage_01286.pdb # 29: usage_01287.pdb # 30: usage_01288.pdb # 31: usage_01289.pdb # 32: usage_01290.pdb # 33: usage_01291.pdb # 34: usage_01292.pdb # 35: usage_01392.pdb # 36: usage_01393.pdb # 37: usage_01394.pdb # # Length: 146 # Identity: 69/146 ( 47.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/146 ( 47.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/146 ( 47.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIV 55 usage_00066.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIV 55 usage_00068.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIV 55 usage_00069.pdb 1 ------LSVI-ALTLFFYIFAI-ATQLFGERFPEWFGTLGESFYTLFQVT-LESW-SGIV 50 usage_00070.pdb 1 ------LSVI-ALTLFFYIFAI-ATQLFGERFPEWFGTLGESFYTLFQVT-LESW-SGIV 50 usage_00611.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00612.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00613.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00617.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00618.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00620.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 55 usage_00621.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 55 usage_00622.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00623.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00624.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_00625.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_00626.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_00627.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_00628.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_01142.pdb 1 --------VI-ALTLFFYIFAI-ATQLFGERFPEWFGTLGESFYTLFQVT-LESW-SGIV 48 usage_01176.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 55 usage_01177.pdb 1 -----MLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 55 usage_01178.pdb 1 --IPGMLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 58 usage_01179.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_01180.pdb 1 IA---------LMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 51 usage_01181.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_01285.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_01286.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_01287.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSDGIV 54 usage_01288.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLEDWSDGIV 54 usage_01289.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLEDWSDGIV 54 usage_01290.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLEDWSDGIV 54 usage_01291.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIV 54 usage_01292.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIV 54 usage_01392.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_01393.pdb 1 ------LSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 54 usage_01394.pdb 1 --IPGMLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLDDWSNGIV 58 TLFFYIFAI ATQLFGERFPEWFGTLGESFYTLFQV L W GIV usage_00065.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAM----------------------- 92 usage_00066.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 89 usage_00068.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 89 usage_00069.pdb 51 RPL-EVYPYAWVFFIPFIFVVTFV-INLVVAIIVDAC----------------------- 85 usage_00070.pdb 51 RPL-EVYPYAWVFFIPFIFVVTFV-INLVVAIIVDAC----------------------- 85 usage_00611.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAI---------------------------- 86 usage_00612.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00613.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_00617.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00618.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00620.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 90 usage_00621.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 89 usage_00622.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_00623.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00624.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00625.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00626.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00627.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_00628.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_01142.pdb 49 RPL-EVYPYAWVFFIPFIFVVTFV-INLVVAIIVD------------------------- 81 usage_01176.pdb 56 RPLMEVYPYAYVFFIPFIFVVTFVMINLVVAIIV-------------------------- 89 usage_01177.pdb 56 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAIIVD------------------------- 90 usage_01178.pdb 59 RPLMEVYPYAYVFFIPFIFVVTFVMINLVVAII--------------------------- 91 usage_01179.pdb 55 RPLMEVYPYAYVFFIPFIFVVTFVMINLVVAIIV-------------------------- 88 usage_01180.pdb 52 RPLMEVYPYAYVFFIPFIFVVTFVMINLVVAIIV-------------------------- 85 usage_01181.pdb 55 RPLMEVYPYAYVFFIPFIFVVTFVMINLVVAIIV-------------------------- 88 usage_01285.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01286.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01287.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01288.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01289.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01290.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01291.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVD------------------------- 89 usage_01292.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICV-------------------------- 88 usage_01392.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAIIVDAM----AILNQKEEQHIIDEVQSHE 110 usage_01393.pdb 55 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAIIVDAMAILNQKEEQHIIDEVQSHEDNIN 114 usage_01394.pdb 59 RPLMEVYPYAWVFFIPFIFVVTFVMINLVVAIIVD------------------------- 93 RPL EVYPYA VFFIPFIFVVTFV INLVVAI usage_00065.pdb -------------------------- usage_00066.pdb -------------------------- usage_00068.pdb -------------------------- usage_00069.pdb -------------------------- usage_00070.pdb -------------------------- usage_00611.pdb -------------------------- usage_00612.pdb -------------------------- usage_00613.pdb -------------------------- usage_00617.pdb -------------------------- usage_00618.pdb -------------------------- usage_00620.pdb -------------------------- usage_00621.pdb -------------------------- usage_00622.pdb -------------------------- usage_00623.pdb -------------------------- usage_00624.pdb -------------------------- usage_00625.pdb -------------------------- usage_00626.pdb -------------------------- usage_00627.pdb -------------------------- usage_00628.pdb -------------------------- usage_01142.pdb -------------------------- usage_01176.pdb -------------------------- usage_01177.pdb -------------------------- usage_01178.pdb -------------------------- usage_01179.pdb -------------------------- usage_01180.pdb -------------------------- usage_01181.pdb -------------------------- usage_01285.pdb -------------------------- usage_01286.pdb -------------------------- usage_01287.pdb -------------------------- usage_01288.pdb -------------------------- usage_01289.pdb -------------------------- usage_01290.pdb -------------------------- usage_01291.pdb -------------------------- usage_01292.pdb -------------------------- usage_01392.pdb 111 DNINNEIIKLREEIVELKELIKTSLK 136 usage_01393.pdb 115 NEIIKLREEIVELKELIKTS------ 134 usage_01394.pdb -------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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