################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:42 2021 # Report_file: c_0379_2.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00008.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00026.pdb # 10: usage_00032.pdb # 11: usage_00033.pdb # 12: usage_00054.pdb # 13: usage_00109.pdb # # Length: 99 # Identity: 84/ 99 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/ 99 ( 84.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 99 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00008.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00011.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00012.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00013.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00014.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00024.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00025.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00026.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00032.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00033.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00054.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 usage_00109.pdb 1 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN 60 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYIN usage_00005.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00008.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00011.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00012.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00013.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00014.pdb 61 GVLMGSAEITGLGAIREDNNITLKLDRCNNNNQYVSIDK 99 usage_00024.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00025.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00026.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00032.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00033.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00054.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 usage_00109.pdb 61 GVLMGSAEITGLGAIREDNNITLK--------------- 84 GVLMGSAEITGLGAIREDNNITLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################