################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:17 2021 # Report_file: c_1203_41.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00502.pdb # 2: usage_00657.pdb # 3: usage_00658.pdb # 4: usage_00659.pdb # 5: usage_00660.pdb # 6: usage_00661.pdb # 7: usage_00957.pdb # 8: usage_01481.pdb # 9: usage_01543.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 50 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 50 ( 70.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00502.pdb 1 PLLMHLKLPR---------NTGMLP-YT-NT---NNVSTLI--------E 28 usage_00657.pdb 1 --DLATKVVRKRDANESVG--LIVL-DQ-DN---QKPCVIE--------- 32 usage_00658.pdb 1 --DLATKVVRKRDANESVG--LIVL-DQ-DN---QKPCVIE--------- 32 usage_00659.pdb 1 --DLATKVVRKRDANESVG--LIVL-DQ-DN---QKPCVIE--------- 32 usage_00660.pdb 1 --DLATKVVRKRDANESVG--LIVL-DQ-DN---QKPCVIE--------- 32 usage_00661.pdb 1 --DLATKVVRKRDANESVG--LIVL-DQ-DN---QKPCVIE--------- 32 usage_00957.pdb 1 ----YFGKL------ESKL--SVIR--N-LND--QVLFIDQGNRPLFED- 32 usage_01481.pdb 1 ---STYFSVYRED-CTNEW--FLVYGDDY-----KVQDIIV--------- 30 usage_01543.pdb 1 NCAPQFVDPQ-M-------PG-L-R-VI-EK-NDKGIVVSG--------- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################