################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:55 2021 # Report_file: c_0819_8.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00023.pdb # 9: usage_00030.pdb # 10: usage_00044.pdb # 11: usage_00045.pdb # 12: usage_00046.pdb # 13: usage_00069.pdb # 14: usage_00070.pdb # 15: usage_00071.pdb # 16: usage_00072.pdb # 17: usage_00094.pdb # 18: usage_00121.pdb # 19: usage_00124.pdb # 20: usage_00134.pdb # # Length: 95 # Identity: 12/ 95 ( 12.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 95 ( 31.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 95 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 56 usage_00002.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 56 usage_00007.pdb 1 ---SPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 57 usage_00008.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 56 usage_00009.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 56 usage_00016.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 56 usage_00017.pdb 1 ---SPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 57 usage_00023.pdb 1 ----PMHMQFLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRELS 56 usage_00030.pdb 1 ----PMHMQFLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRELS 56 usage_00044.pdb 1 ----HCHLTFLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPFELRKACEFFGRVVF 56 usage_00045.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 56 usage_00046.pdb 1 ---SPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 57 usage_00069.pdb 1 ---SPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 57 usage_00070.pdb 1 ---SPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLESLGRLLS 57 usage_00071.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 56 usage_00072.pdb 1 SPH-QYLRN--G---VGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 54 usage_00094.pdb 1 ----PVHLEYMRNIGMHGTMSISILRGERLWGLIACHHRKPNYVDLEVRQACELVAQVLA 56 usage_00121.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 56 usage_00124.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIVCHHQTPYVLPPDLRTTLEELGRKLS 56 usage_00134.pdb 1 ----PMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLS 56 h vg sls S gg LWGLIaCHHqtP v p lR E gr l usage_00001.pdb 57 LQVQVKEAH-------------------------- 65 usage_00002.pdb 57 LQVQVK----------------------------- 62 usage_00007.pdb 58 LQVQVKEALE------------------------- 67 usage_00008.pdb 57 LQVQVKEALE------------------------- 66 usage_00009.pdb 57 LQVQVKEALE------------------------- 66 usage_00016.pdb 57 LQVQVK----------------------------- 62 usage_00017.pdb 58 LQVQVK----------------------------- 63 usage_00023.pdb 57 EQVQVKEALE------------------------- 66 usage_00030.pdb 57 EQVQVKEALE------------------------- 66 usage_00044.pdb 57 SNISAQEDTETFDYRVQLAEHEAVLLDKMTT--A- 88 usage_00045.pdb 57 LQVQVKEAADVAAFRQSLREHHARVALAAA---HS 88 usage_00046.pdb 58 LQVQVKEAADVAAFRQSLREHHARVALAAA---HS 89 usage_00069.pdb 58 LQVQVKEAH-------------------------- 66 usage_00070.pdb 58 LQVQVKEAHHH------------------------ 68 usage_00071.pdb 57 LQVQVKEAADVAAFRQSLREHHARVALAAA-HS-- 88 usage_00072.pdb 55 LQVQVKEAHH------------------------- 64 usage_00094.pdb 57 WQIGVMEEQAL------------------------ 67 usage_00121.pdb 57 LQVQVKEAL-------------------------- 65 usage_00124.pdb 57 GQVQRKEALE------------------------- 66 usage_00134.pdb 57 LQVQVKEAL-------------------------- 65 q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################