################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:10:42 2021 # Report_file: c_0114_6.html ################################################################################################ #==================================== # Aligned_structures: 31 # 1: usage_00015.pdb # 2: usage_00018.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00046.pdb # 8: usage_00047.pdb # 9: usage_00048.pdb # 10: usage_00051.pdb # 11: usage_00052.pdb # 12: usage_00057.pdb # 13: usage_00058.pdb # 14: usage_00074.pdb # 15: usage_00075.pdb # 16: usage_00076.pdb # 17: usage_00077.pdb # 18: usage_00078.pdb # 19: usage_00080.pdb # 20: usage_00095.pdb # 21: usage_00106.pdb # 22: usage_00109.pdb # 23: usage_00110.pdb # 24: usage_00115.pdb # 25: usage_00116.pdb # 26: usage_00120.pdb # 27: usage_00121.pdb # 28: usage_00122.pdb # 29: usage_00124.pdb # 30: usage_00132.pdb # 31: usage_00135.pdb # # Length: 147 # Identity: 25/147 ( 17.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/147 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/147 ( 27.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -VRLVESGGGVVQPGGSLRLSCEGSGFKFGD-H-GIHWVRQAPGEGLQWLTVISSD-G-T 55 usage_00018.pdb 1 --QLVESGGGLVQPGGSLRLSCAVSGYSITS-GYSWNWIRQAPGKGLEWVASITYD---G 54 usage_00024.pdb 1 EVQLVESGGGVVQPGRSLRLSCGASGFTFNT-Y-AMHWVRQAPGKGVEWVAVVSDG-G-G 56 usage_00025.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFSH-Y-MMAWVRQAPGKGLEWVSRIGPS-G-G 55 usage_00043.pdb 1 -VQLLETGGGLVKPGGSLRLSCAASGFSLSD-Y-YMNWIRQAPGKGLEWVAYISSS-S-G 55 usage_00044.pdb 1 -VQLLETGGGLVKPGGSLRLSCAASGFSLSD-Y-YMNWIRQAPGKGLEWVAYISSS-S-G 55 usage_00046.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSS-Y-TMSWVRQTPEKRLEWVAIISSG-G-S 55 usage_00047.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFAIYD-Y-DIHWVRQAPGKGLEWVADIAPY-A-G 54 usage_00048.pdb 1 -EQVLESGGGLVKPGGSLRLSCAASGFTFSP-Y-SVFWVRQAPGKGLEWVSSINSD-S-T 55 usage_00051.pdb 1 --QLQESGGGLVQAGGSLRLSCTASRRT-GSNW-CMGWFRQLAGKEPELVVALNFD-Y-D 54 usage_00052.pdb 1 -VQLVESGGGLVQPGRSLRLSCAASGFTFDD-Y-AMHWVRQAPGKGLEWVSAITWN-S-G 55 usage_00057.pdb 1 -VQLVESGGGLVQPGRSLRLSCAASGFTFDD-Y-AMHWVRQAPGKGLEWVSGISWN-S-G 55 usage_00058.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSS-Y-AMGWVRQAPGKGPEWVSLISGS-G-G 55 usage_00074.pdb 1 -VQLVESGGGLVQPKGSLKLSCAASGFTFNT-Y-AMNWVRQAPGKGLEWVARIRSKSNNY 57 usage_00075.pdb 1 -VKLVESGGGLVKPGASLKLSCAASGFTFSN-Y-GMSWVRQNSDKRLEWVASIRSG-G-G 55 usage_00076.pdb 1 -VKLVESGGGLVKPGASLKLSCAASGFTFSN-Y-GMSWVRQNSDKRLEWVASIRSG-G-G 55 usage_00077.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSR-Y-TMSWVRQAPGKGLEWVATISGG---G 53 usage_00078.pdb 1 -VQLVESGGGVVQPGGSLRLSCAASGFTFNK-F-WMNWVRQAPGKGLEWVADIQVD-G-S 55 usage_00080.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSS-Y-WMNWVRQAPGKGLEWVSGIENKYAGG 57 usage_00095.pdb 1 -VQLVESGGDLVKPGGSLKLSCAASGFTFSS-Y-GMSWVRQTPDKGLEWVATISSG-G-S 55 usage_00106.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSV-Y-YMNWVRQAPGKGLEWVSDINNE-G-G 55 usage_00109.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFSFTS-Y-GISWVRQAPGKGLEWVSHIDWY-G-G 54 usage_00110.pdb 1 -VQLVETGGGLIQPGGSLRLSCAASGFTVSS-N-YMSWVRQAPGKGLEWVSVIYSG---G 54 usage_00115.pdb 1 -VQLVESGGGLVQPGGSLKLSCAASGFTLSG-S-NVHWVRQASGKGLEWVGRIKRNAESD 57 usage_00116.pdb 1 -VQLVESGGGLVQPGGSLKLSCAASGFTLSG-S-NVHWVRQASGKGLEWVGRIKRNAESD 57 usage_00120.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFSN-Y-GMSWVRQAPGKGLEWVASIRSG-G-G 55 usage_00121.pdb 1 -VRLVESGGGVVQPGGSLRLSCEGSGFKFGD-H-GIHWVRQAPGEGLQWLTVISSD-G-T 55 usage_00122.pdb 1 --RLVESGGGVVQPGGSLRLSCEGSGFKFGD-H-GIHWVRQAPGEGLQWLTVISSD-G-T 54 usage_00124.pdb 1 DVQLVESGGGLVQPGGSLRLSCAASGSIFSI-Y-AMGWYRQAPGKQRELVASISSG---G 55 usage_00132.pdb 1 -VMLVESGGGLVKPGGSLKLSCAASGFTFSS-Y-TMSWVRQTPEKRLEWVATISSG-G-G 55 usage_00135.pdb 1 -VQLVESGGDLVKPGGSLKLSCAASGFTFSR-C-AMSWVRQTPEKRLEWVAGISSG-G-S 55 l E GG v pg SL LSC Sg W RQ usage_00015.pdb 56 DERYTDSVKGRFTISRDNSKNTMSLQMNNLRPEDMGLYYCARDGK--C----GGG-R-CY 107 usage_00018.pdb 55 STNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH--Y--------F--G 102 usage_00024.pdb 57 NRYYAASVKGRFTISRDNSKNTLFLQLNTLRPEDTAVYYCARSRG--N--------H--Y 104 usage_00025.pdb 56 PTHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGYDSG-YDYV---A-V--A 108 usage_00043.pdb 56 YTNYGDSVKGRFTISRDHAKNSLYLQMNSLRVEDTAVYYCVRDRD--D--------F--W 103 usage_00044.pdb 56 YTNYGDSVKGRFTISRDHAKNSLYLQMNSLRVEDTAVYYCVRDRD--D--------F--W 103 usage_00046.pdb 56 YTYYSDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRDEG--N--------G--N 103 usage_00047.pdb 55 ATAYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRSSY--A--------Y--- 101 usage_00048.pdb 56 YKYYADSVKGRFTISRDNAENSIFLQMNSLRAEDTAVYYCARDRS--Y--------YA-F 104 usage_00051.pdb 55 MTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG-GF------------ 101 usage_00052.pdb 56 HIDYADSVEGRFTISRDNAKNSLYLDMNSLRAEDTAVYYCAKVSY--L--------S--T 103 usage_00057.pdb 56 SIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGRG--F--------H--Y 103 usage_00058.pdb 56 STWYDDSVKGRFTISRDNSKNLLYLQMNSLRAEDTAVYYCARHAP--S------------ 101 usage_00074.pdb 58 ATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRHRG--A---PL--YY--G 108 usage_00075.pdb 56 RTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCVRYDH--Y------------ 101 usage_00076.pdb 56 RTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCVRYDS--------------- 100 usage_00077.pdb 54 HTYYLDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGFG--D------------ 99 usage_00078.pdb 56 EKNYVDSVKGRFTISRDNGKNSLYLQMNSLRAEDTGVYYCARGRY--D--------Y--W 103 usage_00080.pdb 58 ATYYAASVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARG----------------- 100 usage_00095.pdb 56 YTYYPDNVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHED--G--------N--- 102 usage_00106.pdb 56 TTYYADSVKGRFTISRDNAKNTLTLQMNSLKPEDTALYYCVRDAG--Y--------S--N 103 usage_00109.pdb 55 DTDYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARG-G--P------------ 99 usage_00110.pdb 55 STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYDG--I------------ 100 usage_00115.pdb 58 ATAYAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGD--V------------ 103 usage_00116.pdb 58 ATAYAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGD--V------------ 103 usage_00120.pdb 56 RTYYSDNVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCVRYDH--Y------------ 101 usage_00121.pdb 56 DERYTDSVKGRFTISRDNSKNTMSLQMNNLRPEDMGLYYCARDGK--Y------------ 101 usage_00122.pdb 55 DERYTDSVKGRFTISRDNSKNTMSLQMNNLRPEDMGLYYCARDGK--C----GGG-R-CY 106 usage_00124.pdb 56 GTNYADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDY--S-----------A 102 usage_00132.pdb 56 NTYYPDSVKGRFTISRDIAKNTLYLQMSSLRSEDTALYYCTRLGD--Y--------G--Y 103 usage_00135.pdb 56 YTFYPDTVKGRFIISRNNARNTLSLQMSSLRSEDTAIYYCTRYSS--D------------ 101 Y gR tiS n Lqm L D YYC usage_00015.pdb 108 ------SG---LL-DYWGQGTMVTVS- 123 usage_00018.pdb 103 ------HW---HF-AVWGQGTLVTV-- 117 usage_00024.pdb 105 ------YY---GM-DVWGRGTTVTV-- 119 usage_00025.pdb 109 ---GP-AE---YF-QHWGQGTLVTVS- 126 usage_00043.pdb 104 ------SG---YY-KHWGLGTLVTVS- 119 usage_00044.pdb 104 ------SG---YY-KHWGLGTLVTVS- 119 usage_00046.pdb 104 ----Y-VE---AM-DYWGQGTSVTVS- 120 usage_00047.pdb 102 ------YA---AM-DYWGQGTLVTV-- 116 usage_00048.pdb 105 SSLSDYYY---GL-DVWGQGTLVTVS- 126 usage_00051.pdb 102 ------SSNRELY-DGWGQGTQVTVSS 121 usage_00052.pdb 104 ------AS---SL-DYWGQGTLVTV-- 118 usage_00057.pdb 104 ----Y-YY---GM-DIWGQGTTVTV-- 119 usage_00058.pdb 102 ------TE---AP-DYWGQGTLVTV-- 116 usage_00074.pdb 109 ----N-GA---WF-AYWGQGTLVTV-- 124 usage_00075.pdb 102 ------SG---SS-DYWGQGTTVTVS- 117 usage_00076.pdb 101 -------G---SS-DYWGQGTTVTV-- 114 usage_00077.pdb 100 ------GG---YF-DVWGQGTLVTVS- 115 usage_00078.pdb 104 ------SG---YL-SPWGQGTLVTVS- 119 usage_00080.pdb 101 -------F---GT-DFWGQGTLVTVS- 115 usage_00095.pdb 103 ------WN---YF-DYWGQGTTLTV-- 117 usage_00106.pdb 104 ----H-VP---IF-DSWGQGTQVIV-- 119 usage_00109.pdb 100 ------DY---AM-DVWGQGTLVTV-- 114 usage_00110.pdb 101 ------YG---EL-DFWGQGTLVTVS- 116 usage_00115.pdb 104 -------Y--N---RQWGQGTLVTV-- 116 usage_00116.pdb 104 -------Y--N---RQWGQGTLVTV-- 116 usage_00120.pdb 102 ------SG---SS-DYWGQGTLVTV-- 116 usage_00121.pdb 102 ------SG---LL-DYWGQGTMVTV-- 116 usage_00122.pdb 107 ------SG---LL-DYWGQGTMVTVS- 122 usage_00124.pdb 103 ------YA---PPSGSRGRGTQVTVS- 119 usage_00132.pdb 104 ------AY---TM-DYWGQGTSVTV-- 118 usage_00135.pdb 102 ------PF---YF-DYWGQGTTLTVS- 117 wG GT tV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################