################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:12 2021 # Report_file: c_1333_9.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00011.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00239.pdb # 5: usage_00240.pdb # 6: usage_00340.pdb # 7: usage_00448.pdb # 8: usage_00688.pdb # 9: usage_00700.pdb # 10: usage_00701.pdb # 11: usage_00702.pdb # 12: usage_00731.pdb # 13: usage_00829.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 58 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 58 ( 69.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ----SCGE----------CIQAGPNCGWCTNS---TFL---TSARCD--DLEALKKKG 36 usage_00114.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKDN 37 usage_00115.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKDN 37 usage_00239.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKD- 36 usage_00240.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKD- 36 usage_00340.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKD- 36 usage_00448.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKD- 36 usage_00688.pdb 1 SRKACAEVKEIARKMTYLELSVGTTF---------------------MDEFVSAS--- 34 usage_00700.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKDN 37 usage_00701.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKDN 37 usage_00702.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKDN 37 usage_00731.pdb 1 ----SCQQ----------CLAVSPMCAWCSDE---ALPLGS--PRCD--LKENLLKD- 36 usage_00829.pdb 1 -VP-LQQA----------IAALLPAAALSWHTLSPTC------D-----WLPYIIGVG 35 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################