################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:44 2021 # Report_file: c_1149_47.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00138.pdb # 2: usage_00194.pdb # 3: usage_00195.pdb # 4: usage_00420.pdb # 5: usage_00421.pdb # 6: usage_00422.pdb # 7: usage_00423.pdb # 8: usage_00529.pdb # 9: usage_00530.pdb # 10: usage_00600.pdb # 11: usage_00601.pdb # # Length: 33 # Identity: 1/ 33 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 33 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 33 ( 48.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 NGLSMLPRQD---------GNQNGWIGRHEVYL 24 usage_00194.pdb 1 ---ALRITSQ---------NLS-LAIADVALTI 20 usage_00195.pdb 1 ---ALRITSQ---------NLS-LAIADVALTI 20 usage_00420.pdb 1 ----QNKIPN---------NI--NWIRDFYIFA 18 usage_00421.pdb 1 ----QNKIPN---------NI--NWIRDFYIFA 18 usage_00422.pdb 1 ---QMNKIPN---------NIN-MWIRDFYIFA 20 usage_00423.pdb 1 ---QMNKIPN---------NIN-MWIRDFYIFA 20 usage_00529.pdb 1 ---EINKIPD-ITSD-SD-NIN-MWIRDFYIFA 26 usage_00530.pdb 1 ---QMNKIPN---TG-LITNIN-MWIRDFYIFA 25 usage_00600.pdb 1 ---QMNKIP------S-D-NIN-MWIRDFYIFA 21 usage_00601.pdb 1 ---QMNKIPNT---GS-D-NIN-MWIRDFYIFA 24 n I d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################