################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:26:38 2021 # Report_file: c_0085_3.html ################################################################################################ #==================================== # Aligned_structures: 40 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00018.pdb # 7: usage_00030.pdb # 8: usage_00031.pdb # 9: usage_00035.pdb # 10: usage_00037.pdb # 11: usage_00039.pdb # 12: usage_00058.pdb # 13: usage_00068.pdb # 14: usage_00071.pdb # 15: usage_00072.pdb # 16: usage_00073.pdb # 17: usage_00074.pdb # 18: usage_00076.pdb # 19: usage_00081.pdb # 20: usage_00082.pdb # 21: usage_00083.pdb # 22: usage_00084.pdb # 23: usage_00091.pdb # 24: usage_00092.pdb # 25: usage_00093.pdb # 26: usage_00094.pdb # 27: usage_00105.pdb # 28: usage_00114.pdb # 29: usage_00115.pdb # 30: usage_00118.pdb # 31: usage_00122.pdb # 32: usage_00135.pdb # 33: usage_00136.pdb # 34: usage_00139.pdb # 35: usage_00140.pdb # 36: usage_00141.pdb # 37: usage_00150.pdb # 38: usage_00151.pdb # 39: usage_00152.pdb # 40: usage_00153.pdb # # Length: 109 # Identity: 26/109 ( 23.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/109 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/109 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNPDGTVKLLIYYTSNLHSEVPS 59 usage_00004.pdb 1 DIELTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNPDGTVKLLIYYTSNLHSEVPS 60 usage_00005.pdb 1 DIELTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNPDGTVKLLIYYTSNLHSEVPS 60 usage_00007.pdb 1 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPS 60 usage_00008.pdb 1 -IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLLPGVPS 59 usage_00018.pdb 1 ---MTQITSSLSVSLGDRVIISCRASQDIGNFLNWYQQKPDGSLKLLIYYTSRLQSGVPS 57 usage_00030.pdb 1 -IQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00031.pdb 1 -IQMTQTPSSLSASLGDRVTISCRASQDISHYLNWFQQKPDGTVKLLIYYTSTLHSGVPS 59 usage_00035.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00037.pdb 1 -IQMTQTTSSLSASLGDRVTITCRAGQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00039.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00058.pdb 1 --LMTQIPPSLSASLGDKVTITCQASQNINKYIAWYQQKPGKVPGLLIHYTSTLVSGIPS 58 usage_00068.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVTS 60 usage_00071.pdb 1 -IVLTQSTSSLSASLGDRVTITCRASQDIRNYLSWYQQRPDGTVKLLIYYTSKLHSGVPS 59 usage_00072.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00073.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00074.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDIYNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00076.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYVSQSSSGIPS 59 usage_00081.pdb 1 DIQMTQTTSSLSASLGDGITISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00082.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00083.pdb 1 DIQMTQTTSSLSASLGDGITISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00084.pdb 1 DIQMTQTTSSLSASLGDGITISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00091.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00092.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00093.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00094.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00105.pdb 1 -IVMTQSSSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVELLIYYTSRLQSGVPS 59 usage_00114.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00115.pdb 1 -IVMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKVLIYYTSKLHSGVPS 59 usage_00118.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNHLNWYQQKPDGTVKLLIYYISRFHSGVPS 60 usage_00122.pdb 1 DVQMTQSTSSLSASLGDRVTISCRASQDIKNYLNWYQQKPGGTVKLLIYYSSTLLSGVPS 60 usage_00135.pdb 1 DIQMTQTTSSLSASLGDRVTIICRASQDINNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00136.pdb 1 DIQMTQTTSSLSASLGDRVTIICRASQDINNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00139.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISTYLNWYQQKPDGTVKLLIFYTSRLRSGVPS 59 usage_00140.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNFLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00141.pdb 1 -IQMTQIPSSLSASLGDRVSISCRASQDINNFLNWYQQKPDGTIKLLIYFTSRSQSGVPS 59 usage_00150.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00151.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00152.pdb 1 -IQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00153.pdb 1 --QLTQSTSSLPASLGDRVTISCRAGQDISNHLNWYQQKPDGTVKLLIYYTSRLHSGVPS 58 Q sLs slGD i CrA Q I l WyQQ p lLI y S s pS usage_00003.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQDFTLPFTFGGGTKLEI--- 105 usage_00004.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQDFTLPFTFGGGTKLEI--- 106 usage_00005.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQDFTLPFTFGGGTKLEI--- 106 usage_00007.pdb 61 RFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEI--- 106 usage_00008.pdb 60 RFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEI--- 105 usage_00018.pdb 58 RFSGWGSGTDYSLTISNLEEEDIATFFCQQGKTLPYTFGGGTKLEI--- 103 usage_00030.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEI--- 105 usage_00031.pdb 60 RFSGSGSGTDYSLTISNLEEEDIAFYFCQQGGALPFTFGSGTKLAI--- 105 usage_00035.pdb 61 RFSGSGSGTDYSLTISNLEHEDIATYFCQQGSTLPRTFGGGTKLEI--- 106 usage_00037.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGSTFPWTFGGGTKLEI--- 105 usage_00039.pdb 61 RFSGSGSGTDYSLTISNLEHEDIATYFCQQGSTLPRTFGGGTKLEI--- 106 usage_00058.pdb 59 RFSGSGSGRDYSFSISNVESEDIASYYCLQYDSSPRTFGGGTKLEL--- 104 usage_00068.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKVEI--- 106 usage_00071.pdb 60 RFSGSGSGTDYSLTITNLEQEDIATYFCQQGKTLPLYTFGGGTKLEI-- 106 usage_00072.pdb 60 KFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEI--- 105 usage_00073.pdb 60 KFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEI--- 105 usage_00074.pdb 61 RFSGSGSGTDYSLTISNLNQEDMATYICQQGNTLPFTFGSGTKLEI--- 106 usage_00076.pdb 60 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPRTFGGGTKLEI--- 105 usage_00081.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPYTFGGGTKLEI--- 106 usage_00082.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI--- 106 usage_00083.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPYTFGGGTKLEIKRA 109 usage_00084.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPYTFGGGTKLEIKRA 109 usage_00091.pdb 61 RFSGSGSGTDYSLTISSLEQEDVATYFCQQGNTLPFTFGSGTKLEI--- 106 usage_00092.pdb 61 RFSGSGSGTDYSLTISSLEQEDVATYFCQQGNTLPFTFGSGTKLEI--- 106 usage_00093.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI--- 106 usage_00094.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI--- 106 usage_00105.pdb 60 RFSGSGSGSDYSLTISNLVPEDIATYYCQQYSKLFTFGSGTKLEI---- 104 usage_00114.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTFPPTFGGGTKLEI--- 105 usage_00115.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPPTFGGGTKLEI--- 105 usage_00118.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQSKTLPYTFGGGTKLEI--- 106 usage_00122.pdb 61 RFSGRGSGTDFSLTITNLEREDIATYFCQQSITLPPTFGGGTKLEI--- 106 usage_00135.pdb 61 RFSGSGSGSDYSLTISNLEQEDIATYFCQQANTLPPTFGAGTKLEL--- 106 usage_00136.pdb 61 RFSGSGSGSDYSLTISNLEQEDIATYFCQQANTLPPTFGAGTKLELRRA 109 usage_00139.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGSRIPPTFGGGTKLEI--- 105 usage_00140.pdb 60 RFSGSGSGTDFSLTISKLEQEDIATYFCQQGNTLPLTFGAGTKLEL--- 105 usage_00141.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNALPRTFGGGTKLEI--- 105 usage_00150.pdb 60 RFSGSGSGTDYSLTISNLDQDDIATYFCQQGTTLPPTFGGGTKLEI--- 105 usage_00151.pdb 60 RFSGSGSGTDYSLTISNLDQDDIATYFCQQGTTLPPTFGGGTKLEI--- 105 usage_00152.pdb 60 RFSGSGSGTDYSLTISNLDQDDIATYFCQQGTTLPPTFGGGTKLEI--- 105 usage_00153.pdb 59 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGSKLEI--- 104 FSG GSG D sl I D y CqQ p g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################