################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:27 2021 # Report_file: c_1097_6.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00260.pdb # 2: usage_00480.pdb # 3: usage_00481.pdb # # Length: 173 # Identity: 65/173 ( 37.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/173 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/173 ( 38.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 PDMA----FEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKCTKKLANFPRLC-----EE 51 usage_00480.pdb 1 ----VKKQVKKI--------REPCLKCVDMVISELISTVRQCT----------KKQYPR- 37 usage_00481.pdb 1 ----VKKQVKKI--------REPCLKCVDMVISELISTVRQCT----------KKQYPR- 37 vkkI rePcLKcVDmVIsELIsTVrqCT r usage_00260.pdb 52 TERI----VANHIREREGKTKDQVLLLIDIQVSYINTNHED-FIG------------PQL 94 usage_00480.pdb 38 LREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFI--GFERVGPQLERQVET 95 usage_00481.pdb 38 LREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFI--GFERVGPQLERQVET 95 lree VttHIREREGrTKeQVmLLIDIelaYmNTNHED i vet usage_00260.pdb 95 ERQVETIRNL-VDSYMSIINKCIRDLIPKTIMHLMINNVKDFINS-------- 138 usage_00480.pdb 96 I-------RNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS 141 usage_00481.pdb 96 I-------RNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS 141 i rn VDSYMaIvNKtvRDLmPKTIMHLMINNtKeFIfS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################