################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:49:30 2021 # Report_file: c_0571_46.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00006.pdb # 2: usage_00056.pdb # 3: usage_00057.pdb # 4: usage_00117.pdb # 5: usage_00132.pdb # 6: usage_00188.pdb # 7: usage_00189.pdb # 8: usage_00239.pdb # 9: usage_00240.pdb # 10: usage_00241.pdb # 11: usage_00242.pdb # 12: usage_00243.pdb # 13: usage_00244.pdb # 14: usage_00245.pdb # 15: usage_00246.pdb # 16: usage_00353.pdb # 17: usage_00354.pdb # 18: usage_00355.pdb # 19: usage_00356.pdb # 20: usage_00357.pdb # 21: usage_00358.pdb # 22: usage_00369.pdb # 23: usage_00370.pdb # 24: usage_00371.pdb # 25: usage_00372.pdb # 26: usage_00373.pdb # 27: usage_00374.pdb # 28: usage_00375.pdb # 29: usage_00500.pdb # 30: usage_00501.pdb # 31: usage_00502.pdb # 32: usage_00673.pdb # 33: usage_00695.pdb # 34: usage_00699.pdb # 35: usage_00700.pdb # # Length: 81 # Identity: 58/ 81 ( 71.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 81 ( 71.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 81 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00056.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00057.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00117.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00132.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00188.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00189.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00239.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00240.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00241.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00242.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00243.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00244.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00245.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00246.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00353.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00354.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00355.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00356.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00357.pdb 1 -APYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 59 usage_00358.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00369.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00370.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00371.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00372.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00373.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00374.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00375.pdb 1 -APYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 59 usage_00500.pdb 1 LAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVE 60 usage_00501.pdb 1 LAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVE 60 usage_00502.pdb 1 LAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVE 60 usage_00673.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00695.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00699.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 usage_00700.pdb 1 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE 60 APY KGGKIGLFGGAGVGKTVLIMELINN AK H GYSVFAGVGERTREGNDLYHEM E usage_00006.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00056.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00057.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00117.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00132.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00188.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00189.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00239.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00240.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00241.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00242.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00243.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00244.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00245.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00246.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00353.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00354.pdb 61 SGVINL--------------- 66 usage_00355.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00356.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00357.pdb 60 SGVINLKDATSKV-ALVYG-- 77 usage_00358.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00369.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00370.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00371.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00372.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00373.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00374.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00375.pdb 60 SGVINLKDATSKV-ALVYG-- 77 usage_00500.pdb 61 SGVIKPDDLSKSQ-VALVYG- 79 usage_00501.pdb 61 SGVIKPDDLSKSQVALVYG-- 79 usage_00502.pdb 61 SGVIKPDDLSKSQ-VALVYG- 79 usage_00673.pdb 61 SGVINLKDATSKV-ALVY--- 77 usage_00695.pdb 61 SGVINLKDATSKV-ALVYGQM 80 usage_00699.pdb 61 SGVINLKDATSKV-ALVYG-- 78 usage_00700.pdb 61 SGVINLKDATSKV-ALVYG-- 78 SGVI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################