################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:21 2021 # Report_file: c_0199_43.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00064.pdb # 2: usage_00304.pdb # 3: usage_00305.pdb # 4: usage_00306.pdb # # Length: 161 # Identity: 15/161 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/161 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/161 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 ----PPKAIECLRQNANKAHLYPDDS-IELKSTLAQKYK-------VQNENIIIGAGSDQ 48 usage_00304.pdb 1 ----LPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLG-----PDFAPEHVAVGCGSVS 51 usage_00305.pdb 1 ----LPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLG-----PDFAPEHVAVGCGSVS 51 usage_00306.pdb 1 TRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGI-QLGVENIWAANGSNE 59 p v a rYPD v Lka LA l E g GS usage_00064.pdb 49 VIEFAIHSKLNSKNAFLQAGVTFA-YEIYAKQCGAKCYKTQS---ITHNLDEFKKLYETH 104 usage_00304.pdb 52 LCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLT-DHTFDLYAMLATV--T 108 usage_00305.pdb 52 LCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLT-DHTFDLYAMLATV--T 108 usage_00306.pdb 60 ILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDR 119 qql q g sf yp ga i t dl a v usage_00064.pdb 105 KDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVID 145 usage_00304.pdb 109 -DRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAID 148 usage_00305.pdb 109 -DRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAID 148 usage_00306.pdb 120 K--PDVVFIASPNNPSGQSVSLPDLCKLLDVAP--GIAIVD 156 liF c PNNP v l f vp l iD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################