################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:38:20 2021 # Report_file: c_0659_51.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00013.pdb # 2: usage_00072.pdb # 3: usage_00154.pdb # 4: usage_00191.pdb # 5: usage_00198.pdb # 6: usage_00247.pdb # 7: usage_00250.pdb # 8: usage_00251.pdb # 9: usage_00298.pdb # 10: usage_00306.pdb # 11: usage_00325.pdb # 12: usage_00334.pdb # 13: usage_00384.pdb # 14: usage_00385.pdb # 15: usage_00388.pdb # 16: usage_00396.pdb # 17: usage_00440.pdb # 18: usage_00443.pdb # 19: usage_00477.pdb # 20: usage_00478.pdb # 21: usage_00488.pdb # # Length: 62 # Identity: 9/ 62 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 62 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 62 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 --SASKSGTSASLAISGLRPEDEGDYYCAAWDD-SRG--------GPDWVFGGGTKLTV- 48 usage_00072.pdb 1 --SGSKSGTSASLAISGLQSEDEADYYCEAWDD-SL----------DGVVFGGGTKLTV- 46 usage_00154.pdb 1 RFSGSLIGDKAALTITGAQTEDEAIYFCALWYS-NH-----------WVFG-GGTKLTV- 46 usage_00191.pdb 1 --SGSKSGTSASLAITGLQAEDEADYYCQSYDS-PT----------LTSPFGTGTKLTV- 46 usage_00198.pdb 1 -FSGSKSGTSASLAISGLRSEDEADYYCATWDD-SL----------SAVIFGGGTKLTV- 47 usage_00247.pdb 1 --EESQNESLATLTIQGIRFEDNGIYFCQQKCN-NT----------SEVYQGCGTELRV- 46 usage_00250.pdb 1 --SGSKSGNTASLTVSGLQAEDEADYYCSSYEG-SD-----------NFVFGTGTKVTVL 46 usage_00251.pdb 1 -FSGSKSGNTASLTVSGLQAEDEADYYCSSYEG-SD-----------NFVFGTGTKVTV- 46 usage_00298.pdb 1 -FSGSLIGDKAALTITGAQTEDEAIYFCALWYS-NH-----------LVFG-GGTKLTV- 45 usage_00306.pdb 1 -FSGSKSGTSATLAITGLQTGDEADYYCGTWDSSLS----------TGQLFGGGTKLTV- 48 usage_00325.pdb 1 --SGSKSGKTATLTISGTQSLDEGDYYCQAWDA-S--TGVSGGGTKLTVLFGDGTRLTV- 54 usage_00334.pdb 1 --SGSKSGNTASLTISGLQTDDEADYYCCSYRT-GA-----------TYIFGTGTRVTVL 46 usage_00384.pdb 1 --SGSKSGNTASLAISGLQAEDEADYYCCSYAG-GK-----------SLVFGGGTRLTV- 45 usage_00385.pdb 1 --SGSKSGNTASLAISGLQAEDEADYYCCSYAG-GK-----------SLVFGGGTRLTV- 45 usage_00388.pdb 1 --SGSRSGNTATLTISSLQAEDEADYFCASAED-SS----------SNAVFGSGTTLTV- 46 usage_00396.pdb 1 --SASKSDTSASLAISGLQSEDEADYYCAAWDD-SL----------IGYVFGTGTKLTV- 46 usage_00440.pdb 1 --SASRSGNTASLTITGLQPEDEADYYCSTWDS-SL----------SAVVFGGGTKLTV- 46 usage_00443.pdb 1 --SGSKSGNTASLTVSGLQAEDEADYYCSSYEG-SD-----------NFVFGTGTKVTV- 45 usage_00477.pdb 1 --SGSKSGTSASLAISGLQSEDDADYYCASWDD-SL----------NGVVFGGGTKLTV- 46 usage_00478.pdb 1 --SGSKSGTSASLAISGLQSEDDADYYCASWDD-SL----------NGVVFGGGTKLTV- 46 usage_00488.pdb 1 --SGSKSGDTASLTISGLQAEDEADYYCSSFAN-SG-----------PLFG-GGTKVTV- 44 s S A L g D Y C GT tV usage_00013.pdb -- usage_00072.pdb 47 LG 48 usage_00154.pdb 47 LG 48 usage_00191.pdb -- usage_00198.pdb -- usage_00247.pdb 47 MG 48 usage_00250.pdb 47 G- 47 usage_00251.pdb -- usage_00298.pdb 46 L- 46 usage_00306.pdb -- usage_00325.pdb -- usage_00334.pdb 47 G- 47 usage_00384.pdb -- usage_00385.pdb -- usage_00388.pdb 47 LG 48 usage_00396.pdb 47 L- 47 usage_00440.pdb 47 L- 47 usage_00443.pdb -- usage_00477.pdb 47 LG 48 usage_00478.pdb 47 L- 47 usage_00488.pdb 45 L- 45 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################