################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:23 2021 # Report_file: c_1081_106.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00037.pdb # 2: usage_00326.pdb # 3: usage_00327.pdb # 4: usage_00534.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 74 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 74 ( 52.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 DAIVVGRILTEVIKKE---AP-D-MVFAGVQSSDQAYA--S-TGISVASYLN-------- 44 usage_00326.pdb 1 --EHIVKRLKHYVKTG---SM-P-HLLFAG-P------PGV-GKTTAALALARELFGE-- 43 usage_00327.pdb 1 -QEHIVKRLKHYVKTG---SM-P-HLLFAG-P------PGV-GKTTAALALARELFGE-- 44 usage_00534.pdb 1 ----VEEIANRLKQAQESGK-DHGLVVVAEG---------VMTADQFMAELKKYGD-FDV 45 l k a v a L usage_00037.pdb 45 ------WPHAAV-- 50 usage_00326.pdb 44 NWRHNFLELN--AS 55 usage_00327.pdb 45 NWRH-NFLEL--N- 54 usage_00534.pdb 46 ----RANVLGH--- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################