################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:34:48 2021 # Report_file: c_0489_9.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00008.pdb # 2: usage_00037.pdb # 3: usage_00039.pdb # 4: usage_00045.pdb # 5: usage_00046.pdb # 6: usage_00069.pdb # 7: usage_00088.pdb # 8: usage_00089.pdb # 9: usage_00090.pdb # 10: usage_00091.pdb # 11: usage_00092.pdb # 12: usage_00120.pdb # 13: usage_00132.pdb # 14: usage_00140.pdb # 15: usage_00141.pdb # 16: usage_00145.pdb # 17: usage_00149.pdb # 18: usage_00151.pdb # 19: usage_00181.pdb # 20: usage_00182.pdb # 21: usage_00190.pdb # # Length: 83 # Identity: 13/ 83 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 83 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 83 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -SSEFSKIVRDLSQ-LSDSINIMITKETIKFVADGDIGSGSVIIKPFVDMEHPETSIKLE 58 usage_00037.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTS---KEEEAVTIE 56 usage_00039.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 59 usage_00045.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQT-------EAVTIE 51 usage_00046.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTS------EAVTIE 52 usage_00069.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 59 usage_00088.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLS----------AVTIE 49 usage_00089.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQ---------AVTIE 49 usage_00090.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQT--------AVTIE 50 usage_00091.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQT-------SAVTIE 52 usage_00092.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQT--------AVTIE 50 usage_00120.pdb 1 --GEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 57 usage_00132.pdb 1 -SAEFLKITKDFSALGDDSITIGCTKNEVTLTTKGAMCETCMTLSA---------GLQIE 50 usage_00140.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTS----EEEAVTIE 54 usage_00141.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTS-----EEAVTIE 53 usage_00145.pdb 1 -SSEFSKIVRDLSQ-LSDSINIMITCETIKFVADGDIGSGSVIIKPFVDMEHPETSIKLE 58 usage_00149.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTS------EAVTIE 53 usage_00151.pdb 1 PSGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTE------EAVTIE 53 usage_00181.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 58 usage_00182.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 58 usage_00190.pdb 1 -SGEFARICRDLSH-IGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 58 EF I rDlS D I k kf a G g g E usage_00008.pdb 59 MDQPVDLTFGAKYLLDIIKGSSL 81 usage_00037.pdb 57 MNEPVQLTFALRYLNFFTKATPL 79 usage_00039.pdb 60 MNEPVQLTFALRYLNFFTKATPL 82 usage_00045.pdb 52 MNEPVQLTFALRYLNFFTKATPL 74 usage_00046.pdb 53 MNEPVQLTFALRYLNFFTKATPL 75 usage_00069.pdb 60 MNEPVQLTFALRYLNFFTKATPL 82 usage_00088.pdb 50 MNEPVQLTFALRYLNFFTKATPL 72 usage_00089.pdb 50 MNEPVQLTFALRYLNFFTKATPL 72 usage_00090.pdb 51 MNEPVQLTFALRYLNFFTKATPL 73 usage_00091.pdb 53 MNEPVQLTFALRYLNFFTKATPL 75 usage_00092.pdb 51 MNEPVQLTFALRYLNFFTKATPL 73 usage_00120.pdb 58 MNEPVQLTFALRYLNFFTKATPL 80 usage_00132.pdb 51 HNKDVTASFALKQISEFAKSAPL 73 usage_00140.pdb 55 MNEPVQLTFALRYLNFFTKATPL 77 usage_00141.pdb 54 MNEPVQLTFALRYLNFFTKATPL 76 usage_00145.pdb 59 MDQPVDLTFGAKYLLDIIKGSSL 81 usage_00149.pdb 54 MNEPVQLTFALRYLNFFTKATPL 76 usage_00151.pdb 54 MNEPVQLTFALRYLNFFTKATPL 76 usage_00181.pdb 59 MNEPVQLTFALRYLNFFTKATPL 81 usage_00182.pdb 59 MNEPVQLTFALRYLNFFTKATPL 81 usage_00190.pdb 59 MNEPVQLTFALRYLNFFTKATPL 81 m pV ltF yl K L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################