################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:12 2021 # Report_file: c_1415_187.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00560.pdb # 2: usage_01236.pdb # 3: usage_01240.pdb # # Length: 48 # Identity: 3/ 48 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 48 ( 56.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 48 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00560.pdb 1 DRD----VAKTIVDN-VLAKIYA--KIYNSLNKEQKD-K-LYRDVEE- 38 usage_01236.pdb 1 -DETIA-KVAVTKS-GPLWDNVYGKG-----WEEKVTDE-LTKLFRRI 39 usage_01240.pdb 1 -DETIAKMVAVTKSMGPLWANVYGPT-----WEEKVTDEMLTALFRRI 42 de vavtks pLw nvy weEkvt e Lt lfrr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################