################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:37 2021 # Report_file: c_0849_5.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00162.pdb # 2: usage_00228.pdb # 3: usage_00231.pdb # 4: usage_00275.pdb # 5: usage_00299.pdb # 6: usage_00307.pdb # 7: usage_00384.pdb # 8: usage_00385.pdb # 9: usage_00458.pdb # 10: usage_00459.pdb # 11: usage_00508.pdb # 12: usage_00517.pdb # 13: usage_00534.pdb # 14: usage_00603.pdb # 15: usage_00646.pdb # # Length: 75 # Identity: 11/ 75 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 75 ( 24.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 75 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00162.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00228.pdb 1 KTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV 60 usage_00231.pdb 1 RTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSK 60 usage_00275.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLFAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00299.pdb 1 KTLDVVERQLNAVLEEVK--DWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASK 58 usage_00307.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00384.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00385.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00458.pdb 1 -----------------SKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEK 43 usage_00459.pdb 1 -----------------SKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEK 43 usage_00508.pdb 1 RTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAAGTGKVATPQQAQEAHALIRSWVSSK 60 usage_00517.pdb 1 -----------------TAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAAD 43 usage_00534.pdb 1 KTLDVVERQLNAVLEEVK--DWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASK 58 usage_00603.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 usage_00646.pdb 1 KTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDT 58 YEP w iGTG Atp A h R usage_00162.pdb 59 CGEKQANQIRILY-- 71 usage_00228.pdb 61 DAN-IAEQVIIQY-- 72 usage_00231.pdb 61 IGADVAGELRILYG- 74 usage_00275.pdb 59 CGEKQANQIRILY-- 71 usage_00299.pdb 59 LGDKAASELRILY-- 71 usage_00307.pdb 59 CGEKQANQIRILY-- 71 usage_00384.pdb 59 CGEKQANQIRILY-- 71 usage_00385.pdb 59 CGEKQANQIRILY-- 71 usage_00458.pdb 44 VAAEGAQHIRIIY-- 56 usage_00459.pdb 44 VAAEGAQHIRIIY-- 56 usage_00508.pdb 61 IGADVAGELRILYGG 75 usage_00517.pdb 44 FGQEVADKVRVQY-- 56 usage_00534.pdb 59 LGDKAASELRILY-- 71 usage_00603.pdb 59 CGEKQANQIRILY-- 71 usage_00646.pdb 59 CGEKQANQIRILY-- 71 A ri Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################