################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:57 2021 # Report_file: c_1131_32.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00140.pdb # 2: usage_00141.pdb # 3: usage_00142.pdb # 4: usage_00202.pdb # # Length: 122 # Identity: 27/122 ( 22.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/122 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 72/122 ( 59.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00140.pdb 1 EATKFT-------EVDSIIRDLTDSAMKLVRQQEIAKNRI-------------------- 33 usage_00141.pdb 1 EATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR-YRAEELAEERILDVLIPPAK 59 usage_00142.pdb 1 EATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR-YRAEELAEERILDVLIPPAK 59 usage_00202.pdb 1 EATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR-YRAEELAEERILDVLIPPAK 59 EATKFT EVDSIIRDLTDaAvKmVRvQaIeKNR usage_00140.pdb 34 -------D-----DEAAKLI-------------------------NPEELKQKAIDAVEQ 56 usage_00141.pdb 60 NNWGQTEQQQEPSAARQAF-RKKLR----------------EGLKIKDAMKLLIEE---- 98 usage_00142.pdb 60 NNWGQTEQQQEPSAARQAF-RKKLR----------------EGLKIKDAMKLLIEE---- 98 usage_00202.pdb 60 NNWGQTEQQQEPSAARQAF-RKKLREGQLDDKEIEKQKARK--LKIKDAMKLLIEEEAAK 116 q aarqaf ikdamKlliee usage_00140.pdb 57 NG 58 usage_00141.pdb -- usage_00142.pdb -- usage_00202.pdb 117 LV 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################