################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:25 2021 # Report_file: c_0261_25.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00049.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # # Length: 180 # Identity: 68/180 ( 37.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 166/180 ( 92.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/180 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -AQYKAIADSEFNLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWH 59 usage_00078.pdb 1 NSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATENNMTVHGHALVWH 60 usage_00079.pdb 1 NSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATENNMTVHGHALVWH 60 sreqAvvkkhFNhltAgNiMKmsymqPtegnFnFtnaDafvdwAtennmtvhGHaLVWH usage_00049.pdb 60 SQ--LPDWA--KNLNGSAFESAMVNHVTKVADHFE--GKVASWDVVNEAFADGG---GR- 109 usage_00078.pdb 61 SDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDN-SPANFR 119 usage_00079.pdb 61 SDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDN-SPANFR 119 Sd vPnfm wagsaedFlaAldtHiTtivDHyE GnlvSWDVVNeAidDn nf usage_00049.pdb 110 RQDSAFQQKL--GNGYIETAFRAARAADPTAKLCINDYNVEGINAKSNSLYDLVKDFKAR 167 usage_00078.pdb 120 TTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQAR 179 usage_00079.pdb 120 TTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQAR 179 ttDSAFyvKs ssvYIErAFqtARAADPaviLyyNDYNiEqnNAKttkmvDmVKDFqAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################