################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:06 2021 # Report_file: c_1256_337.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01326.pdb # 2: usage_01327.pdb # 3: usage_01348.pdb # 4: usage_01898.pdb # 5: usage_03389.pdb # 6: usage_04178.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 43 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 43 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01326.pdb 1 -FRLALIQLQV---SSIKSDNLTRACSLVREAAKQGANIVSLP 39 usage_01327.pdb 1 -FRLALIQLQV---SSIKSDNLTRACSLVREAAKQGANIVSLP 39 usage_01348.pdb 1 -STIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLP 42 usage_01898.pdb 1 -YRVLQANLQR---------KKLATAELAIEAATRKAAIALIQ 33 usage_03389.pdb 1 RIALAQLNV----TVGDFAGNVAKIVAAAQAAHDAGAHFLIAP 39 usage_04178.pdb 1 KVVVSALQFAC---TDDVSTNVTTAERLVRAAHKQGANIVLIQ 40 n A a i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################