################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:29:51 2021 # Report_file: c_0237_2.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00005.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00034.pdb # 7: usage_00035.pdb # 8: usage_00042.pdb # 9: usage_00061.pdb # 10: usage_00062.pdb # 11: usage_00063.pdb # 12: usage_00065.pdb # 13: usage_00066.pdb # 14: usage_00067.pdb # 15: usage_00071.pdb # 16: usage_00072.pdb # 17: usage_00073.pdb # 18: usage_00074.pdb # 19: usage_00076.pdb # 20: usage_00077.pdb # 21: usage_00078.pdb # 22: usage_00079.pdb # 23: usage_00080.pdb # 24: usage_00092.pdb # 25: usage_00093.pdb # 26: usage_00098.pdb # 27: usage_00099.pdb # # Length: 164 # Identity: 32/164 ( 19.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/164 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/164 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 YAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 60 usage_00028.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00029.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00032.pdb 1 -GEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVT 59 usage_00033.pdb 1 YAELVGFGMSGDAFHMTAPPEDGAGAARCMKNALRDAGLDPRQVDYINAHGTSTPAGDIA 60 usage_00034.pdb 1 YGEVIGYGSTGDAYHMTAPHPEGRGAYRAMRDAMLDATITPDMIDYINAHGTSTTLGDGI 60 usage_00035.pdb 1 YGEVIGYGSTGDAYHMTAPHPEGRGAYRAMRDAMLDATITPDMIDYINAHGTSTTLGDGI 60 usage_00042.pdb 1 YAELVGFGMSGDAFHMTAPPEDGAGAARCMKNALRDAGLDPRQVDYINAHGTSTPAGDIA 60 usage_00061.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00062.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00063.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00065.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00066.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00067.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00071.pdb 1 YAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLN 60 usage_00072.pdb 1 -----GFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRA 55 usage_00073.pdb 1 ----CGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 56 usage_00074.pdb 1 YAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 60 usage_00076.pdb 1 YAEIVGFGMSSDAYHITAPN--EEGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDAN 58 usage_00077.pdb 1 YAEIVGFGMSSDAYHITAPN--EEGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDAN 58 usage_00078.pdb 1 YAELVGFGMSGDAFHMTAPPEDGAGAARCMKNALRDAGLDPRQVDYINAHGTSTPAGDIA 60 usage_00079.pdb 1 YAEIVGYGATGDAYHITAPAPNGEGAARA-K-AIDDAGLTPDKVDYINAHGTSTPYNDEY 58 usage_00080.pdb 1 IAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAG 60 usage_00092.pdb 1 -----GFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 55 usage_00093.pdb 1 YAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKA 60 usage_00098.pdb 1 YAEVVGFGMSSDAYHMTSPPEDGSGAALAMVNALRDAGITTSQIGYINAHGTSTPAGDKA 60 usage_00099.pdb 1 YAEVVGFGMSSDAYHMTSPPEDGSGAALAMVNALRDAGITTSQIGYINAHGTSTPAGDKA 60 G g DA H T p G A Y NAH TST D usage_00005.pdb 61 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 118 usage_00028.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00029.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00032.pdb 60 ETRAIKQALGNHA--YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENP 117 usage_00033.pdb 61 EIAAVKSVFGEHA--HALSMSSTKSMTGHLLGAAGAVEAIFSVLALRDQVAPPTINLDNP 118 usage_00034.pdb 61 ELAAVQKLFLEAN--PKVLMSSTKSSIGHLLGAAGSVEFIFSALAIRDQIAPPTLNLDTP 118 usage_00035.pdb 61 ELAAVQKLFLEAN--PKVLMSSTKSSIGHLLGAAGSVEFIFSALAIRDQIAPPTLNLDTP 118 usage_00042.pdb 61 EIAAVKSVFGEHA--HALSMSSTKSMTGHLLGAAGAVEAIFSVLALRDQVAPPTINLDNP 118 usage_00061.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00062.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00063.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00065.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00066.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00067.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00071.pdb 61 EVKAIKNTFGEAA--KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTP 118 usage_00072.pdb 56 EVLAIKRVFGDHA--KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP 113 usage_00073.pdb 57 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 116 usage_00074.pdb 61 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 118 usage_00076.pdb 59 ETKALKRAFGEHA--YKTVVSSTKSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQ 116 usage_00077.pdb 59 ETKALKRAFGEHA--YKTVVSSTKSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQ 116 usage_00078.pdb 61 EIAAVKSVFGEHA--HALSMSSTKSMTGHLLGAAGAVEAIFSVLALRDQVAPPTINLDNP 118 usage_00079.pdb 59 ETQAIKTVFGEHA--KKLAISSTKS-TGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQ 115 usage_00080.pdb 61 EIEALKTVFGV---GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHP 117 usage_00092.pdb 56 EAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 113 usage_00093.pdb 61 EAQAVKTIFGEAA--SRVLVSSTASMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 118 usage_00098.pdb 61 ETQAVKSVFGEDA--YKVMVSSTKSMTGHLLGAAGAVESIFTVLALRDQAIPATINLDNP 118 usage_00099.pdb 61 ETQAVKSVFGEDA--YKVMVSSTKSMTGHLLGAAGAVESIFTVLALRDQAIPATINLDNP 118 E A f SSTks GHlLGa G E T usage_00005.pdb 119 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 159 usage_00028.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00029.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00032.pdb 118 D-P-ECD-LDYVPGQSRALI-VDVALSNSFGFGGHNVTLAFKK- 156 usage_00033.pdb 119 D-E-GCD-LDLVAHEAKPRK-IDVALSNSFGFGGTNGTLVFRR- 157 usage_00034.pdb 119 M-D-EVN-IDLVALKAKKTK-IDYVLSNSFGFGGTNASLVIKS- 157 usage_00035.pdb 119 M-D-EVN-IDLVALKAKKTK-IDYVLSNSFGFGGTNASLVIKS- 157 usage_00042.pdb 119 D-E-GCD-LDLVAHEAKPRK-IDVALSNSFGFGGTNGTLVFRR- 157 usage_00061.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00062.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00063.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00065.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00066.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00067.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00071.pdb 119 D-P-ECD-LDIVPNEAQDLD-ITYAMSNSLGFGGHNAVLVFKK- 157 usage_00072.pdb 114 D-P-ELD-LDFVPEPR-EAK-VDYALSNSFAFGGHNAVLAFK-- 150 usage_00073.pdb 117 D-P-IFDKRFMPLTTSKKML-VRTAMSNSFGFGGTNASLLFAS- 156 usage_00074.pdb 119 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 159 usage_00076.pdb 117 DVEAGCD-LDYCANEARDAE-IDVAISNSFGFGGTNGTLVFK-- 156 usage_00077.pdb 117 DVEAGCD-LDYCANEARDAE-IDVAISNSFGFGGTNGTLVFKR- 157 usage_00078.pdb 119 D-E-GCD-LDLVAHEAKPRK-IDVALSNSFGFGGTNGTLVFRR- 157 usage_00079.pdb 116 D-E-VCD-LDYVPNEAREAN-VNVVISNSFGFGGHNATLVFKR- 154 usage_00080.pdb 118 D-P-AADGLDLIGPAARHVP-VEIALSNGFGFGGVNASVLFRR- 157 usage_00092.pdb 114 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK-- 152 usage_00093.pdb 119 D-E-GCD-LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 159 usage_00098.pdb 119 D-E-GCD-LDYVPHDARQVKDMEYTLCNSFGFGGTNGSLVFR-- 157 usage_00099.pdb 119 D-E-GCD-LDYVPHDARQVKDMEYTLCNSFGFGGTNGSLVFRKV 159 d NsfgFGG N l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################