################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:43:02 2021 # Report_file: c_0085_8.html ################################################################################################ #==================================== # Aligned_structures: 49 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00013.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00033.pdb # 8: usage_00034.pdb # 9: usage_00036.pdb # 10: usage_00040.pdb # 11: usage_00041.pdb # 12: usage_00042.pdb # 13: usage_00044.pdb # 14: usage_00048.pdb # 15: usage_00049.pdb # 16: usage_00050.pdb # 17: usage_00051.pdb # 18: usage_00052.pdb # 19: usage_00053.pdb # 20: usage_00056.pdb # 21: usage_00057.pdb # 22: usage_00069.pdb # 23: usage_00070.pdb # 24: usage_00078.pdb # 25: usage_00079.pdb # 26: usage_00080.pdb # 27: usage_00088.pdb # 28: usage_00095.pdb # 29: usage_00099.pdb # 30: usage_00101.pdb # 31: usage_00102.pdb # 32: usage_00103.pdb # 33: usage_00112.pdb # 34: usage_00113.pdb # 35: usage_00116.pdb # 36: usage_00117.pdb # 37: usage_00119.pdb # 38: usage_00120.pdb # 39: usage_00126.pdb # 40: usage_00127.pdb # 41: usage_00129.pdb # 42: usage_00130.pdb # 43: usage_00131.pdb # 44: usage_00132.pdb # 45: usage_00133.pdb # 46: usage_00154.pdb # 47: usage_00155.pdb # 48: usage_00156.pdb # 49: usage_00157.pdb # # Length: 116 # Identity: 19/116 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/116 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/116 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 DIQMTQSPSSVSASIGDRVTITCRASQGI-D------NWLGWYQQKPGKAPKLLIYDASN 53 usage_00011.pdb 1 DIQMTQSPILLSASVGDRVTITCRASQDV-N------TAVAWYQQRTNGSPRLLIYSASF 53 usage_00013.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-N------TAVAWYQQKPGKAPKLLIYSADF 52 usage_00021.pdb 1 --KMTQSPSSMYTSLGERVTITCKASQDI-N------SFLTWFLQKPGKSPKTLIYRANR 51 usage_00022.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI-R------YYLNWYQQKPGKAPKLLIYVASS 52 usage_00023.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI-R------YYLNWYQQKPGKAPKLLIYVASS 52 usage_00033.pdb 1 -IQMTQSPSSLSAAVGDRVTITCQASQDI-V------NYLNWYQQKPGKAPKLLIYVASN 52 usage_00034.pdb 1 EIVLTQSPGTQSLSPGERATLSCRASQSVGN------NKLAWYQQRPGQAPRLLIYGASS 54 usage_00036.pdb 1 --VMTQSPATLSVSPGERATLSCRASQSI-G------NNLHWYQQKPGQAPRLLIYYASQ 51 usage_00040.pdb 1 -ILMTQSPSSMSVSLGDTVSITCHASQGI-S------SNIGWLQQKPGKSFMGLIYYGTN 52 usage_00041.pdb 1 -ILMTQSPSSMSVSLGDTVSITCHASQGI-S------SNIGWLQQKPGKSFMGLIYYGTN 52 usage_00042.pdb 1 -ILMTQSPSSMSVSLGDTVSITCHASQGI-S------SNIGWLQQKPGKSFMGLIYYGTN 52 usage_00044.pdb 1 -IQMTQSPSSLSASVGDRVTITCRSSQSL-VH-NNANTYLHWYQQKPGKAPKLLIYKVSN 57 usage_00048.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEI-S------GYLSWLQQKPDGTIKRLIYAAST 52 usage_00049.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEI-S------GYLSWLQQKPDGTIKRLIYAAST 52 usage_00050.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEI-S------GYLSWLQQKPDGTIKRLIYAAST 52 usage_00051.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDI-R------NYLNWYQQKPGKAPKLLIYDASN 51 usage_00052.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDI-R------NYLNWYQQKPGKAPKLLIYDASN 51 usage_00053.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDI-R------NYLNWYQQKPGKAPKLLIYDASN 51 usage_00056.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDV-S------TAVAWYQQKPGKAPKLLIYSASF 53 usage_00057.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDV-S------TAVAWYQQKPGKAPKLLIYSASF 53 usage_00069.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDI-A------SDLNWYQQKPGKAPKLLIYSDSY 52 usage_00070.pdb 1 -IQMTQSPSSLSASLGGKVTITCKASQDI-N------KYIAWYQHKPGKGPRLLIQYTST 52 usage_00078.pdb 1 DIQMTQSPGTLSLSPGERATLSCRASQSV-S------SYLAWYQQKPGQAPRLLIYDASN 53 usage_00079.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKSI-S------KYLAWYQQKPGQAPRLLIYSGST 53 usage_00080.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSI-G------TNIHWYQQRTNGSPRLLIKYASE 52 usage_00088.pdb 1 EIVLTQSPGTQSLSPGERATLSCRASQSVGN------NKLAWYQQRPGQAPRLLIYGASS 54 usage_00095.pdb 1 -IVMTQSPATLSLSPGERATLSCRASQSV-S------SYLAWYQQKPGQAPRLLIYDASN 52 usage_00099.pdb 1 -IKMTQSPASLSASLGDKVTITCQASQNI-D------KYIAWYQQKPGKAPRQLIHYTST 52 usage_00101.pdb 1 -IQLTQSPSSLAMSGGQKVTMRCKSSQSL-LNSRNERNYLAWYQQKPGQSPKLLVYFASI 58 usage_00102.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQGI-S------SYLAWYQQKPGKAPKLLIYAASS 52 usage_00103.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI-N------NYLIWYQQKPGQAPKLLIYDAST 52 usage_00112.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-S------TAVAWYQQKPGKAPKLLIYSASF 52 usage_00113.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-N------TAVAWYQQKPGKAPKLLIYSASF 52 usage_00116.pdb 1 -IVMTQSPDSLAVSLGERATINCKSSQ---K------NYLAWYQQKPGQPPKLLIYWAST 50 usage_00117.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQSI-S------NNLNWYQQKPGKAPKLLIYYTSR 51 usage_00119.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSI-G------TNIHWYQQRTNGSPRLLIKYASE 52 usage_00120.pdb 1 --QMTQSPSLLSASVGDRVTLSCKASQNI-Y------NYLNWYQQKLGEAPKLLIYYTDR 51 usage_00126.pdb 1 DIQLTQSPSSLSASVGDRVTITCQASQDI-R------KYLNWYQQKPGKAPNLLIYDASN 53 usage_00127.pdb 1 DIQLTQSPSSLSASVGDRVTITCQASQDI-R------KYLNWYQQKPGKAPNLLIYDASN 53 usage_00129.pdb 1 DIQMTQSPSSLSASVGDRVTITCQASQDI-S------DYLIWYQQKLGKAPNLLIYDAST 53 usage_00130.pdb 1 -IQMTQSPPSLSASLGDKVTITCQASQDI-N------KYIAWYQQKPGKAPRQLIRYTSI 52 usage_00131.pdb 1 -ILMTQSPLSLSASLGDKVTITCQASQII-Y------NYIAWYQQKPGKAPRLLIRYTST 52 usage_00132.pdb 1 --VMTQSPATLSVSPGERATLSCRASQSI-G------NNLHWYQQKPGQAPRLLIYYASQ 51 usage_00133.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-N------TAVAWYQQKPGKAPKLLIYSASF 52 usage_00154.pdb 1 --QLTQSPSSLSASVGDRVTITCRASQSV-DY--DGDSYMNWYQQKPGKAPKLLIYAASY 55 usage_00155.pdb 1 --QLTQSPSSLSASVGDRVTITCRASQSV-DY--DGDSYMNWYQQKPGKAPKLLIYAASY 55 usage_00156.pdb 1 --QLTQSPSSLSASVGDRVTITCRASQSV-DY--DGDSYMNWYQQKPGKAPKLLIYAASY 55 usage_00157.pdb 1 --QLTQSPSSLSASVGDRVTITCRASQSV-DY--DGDSYMNWYQQKPGKAPKLLIYAASY 55 TQSP s G C Sq W qq Li usage_00010.pdb 54 LDTGVPSRFSGSGSGTYFTLTISSLQAEDFAVYFCQQAKAFPPTFGGGTKVDI--- 106 usage_00011.pdb 54 LYSGVPSRFSGSRSGTDFTLTISSLQPEDIADYYCQQHYTTPPTFGAGTKVEI--- 106 usage_00013.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEI--- 105 usage_00021.pdb 52 LMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDL--- 104 usage_00022.pdb 53 LQSGVPSRFSGSGSGTEFTLTVSSLQPEDFATYYCLQVYSTPRTFGQGTKVEI--- 105 usage_00023.pdb 53 LQSGVPSRFSGSGSGTEFTLTVSSLQPEDFATYYCLQVYSTPRTFGQGTKVEI--- 105 usage_00033.pdb 53 LETGVPSRFSGSGSGTDFSLTISSLQPEDVATYYCQQYDNLPLTFGGGTKVEIKRT 108 usage_00034.pdb 55 RPSGVADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGQSLSTFGQGTKVEV--- 107 usage_00036.pdb 52 SISGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQSNSWPYTFGGGTKVEI--- 104 usage_00040.pdb 53 LVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00041.pdb 53 LVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00042.pdb 53 LVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00044.pdb 58 RFSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCSQNTLVPWTFGQGTKVEI--- 110 usage_00048.pdb 53 LDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00049.pdb 53 LDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00050.pdb 53 LDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00051.pdb 52 SETGVPSRFSGSGSGRDFTFTISSLQPEDVATYYCQQHQNVPLTTFGGGTKVE-I- 105 usage_00052.pdb 52 SETGVPSRFSGSGSGRDFTFTISSLQPEDVATYYCQQHQNVPLTTFGGGTKVE-I- 105 usage_00053.pdb 52 SETGVPSRFSGSGSGRDFTFTISSLQPEDVATYYCQQHQNVPLTTFGGGTKVE-I- 105 usage_00056.pdb 54 LYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRITPPTFGQGTKVEI--- 106 usage_00057.pdb 54 LYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSQISPPTFGQGTKVEI--- 106 usage_00069.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYMIPSTFGQGTKVEI--- 105 usage_00070.pdb 53 LQPDIPSRFTGSGSGRDYSFSISNLEPEDIAIYYCLQYDNLYTFGGGTQLEIK-RA 107 usage_00078.pdb 54 RATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYDKWPLTFGGGTKVEI--- 106 usage_00079.pdb 54 LQSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHNEYPYTFGQGTKLEI--- 106 usage_00080.pdb 53 SISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLEL--- 105 usage_00088.pdb 55 RPSGVADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGQSLSTFGQGTKVEVK-- 108 usage_00095.pdb 53 RATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEIKRT 108 usage_00099.pdb 53 LVSGTPSRFSGSGSGRDYTFSISSVESEDIASYYCLQYDTLYTFGAGTKLEL---- 104 usage_00101.pdb 59 RESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCLQHYNTPWTFGGGTKLEI--- 111 usage_00102.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYYCQQHGNLPYTFGDGTKVEI--- 105 usage_00103.pdb 53 LETGVPSRFSGSGSGTEFTFTISSLQPEDLATYYCQQYDNLPYTFGQGTKLEI--- 105 usage_00112.pdb 53 LYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSFYFPNTFGQGTKVEI--- 105 usage_00113.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEI--- 105 usage_00116.pdb 51 RESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQY----YSFGGGTKVEI--- 99 usage_00117.pdb 52 FHSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQEHTLPYTFGQGTKLEI--- 104 usage_00119.pdb 53 SISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLEL--- 105 usage_00120.pdb 52 LQTGIPSRFSGDGSGSDYTLTISSLQPEDVATYFCQQYNSRDTFGAGTKLDLK-RT 106 usage_00126.pdb 54 VKTGVPSRFRGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEI--- 106 usage_00127.pdb 54 VKTGVPSRFRGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLE---- 105 usage_00129.pdb 54 LETGVPSRFSGSGSGTEYTFTISSLQPEDIATYYCQQYDDLPYTFGQGTKVEI--- 106 usage_00130.pdb 53 LVLGTPSRFSGSGSGRDFSFSISNVASEDIASYYCLQYGNLYTFGAGTKLEIK-RA 107 usage_00131.pdb 53 LESGTPSRFSGSGSGRDYSFSISNVESEDIASYYCLQYDNLPYMFGAGTKLELKRA 108 usage_00132.pdb 52 SISGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQSNSWPYTFGGGTKVEI--- 104 usage_00133.pdb 53 LESGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEI--- 105 usage_00154.pdb 56 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRT 111 usage_00155.pdb 56 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEI--- 108 usage_00156.pdb 56 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEI--- 108 usage_00157.pdb 56 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRT 111 g RF Gs SG ED a Y C Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################