################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:57:55 2021 # Report_file: c_0171_9.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00003.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00019.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00067.pdb # 8: usage_00069.pdb # 9: usage_00072.pdb # 10: usage_00128.pdb # 11: usage_00129.pdb # 12: usage_00131.pdb # 13: usage_00229.pdb # 14: usage_00249.pdb # 15: usage_00251.pdb # 16: usage_00273.pdb # 17: usage_00279.pdb # 18: usage_00280.pdb # # Length: 175 # Identity: 16/175 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/175 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/175 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -AEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAG 59 usage_00010.pdb 1 -REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 59 usage_00011.pdb 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 60 usage_00019.pdb 1 -REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 59 usage_00064.pdb 1 -REYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 59 usage_00065.pdb 1 -REYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 59 usage_00067.pdb 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVDEYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60 usage_00069.pdb 1 ---YRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTG 57 usage_00072.pdb 1 -PELKVGIVGNLSSGKSALVHRYLTGTYVQEESP-EGGRFKKEIVVDGQSYLLLIRDEGG 58 usage_00128.pdb 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 60 usage_00129.pdb 1 MREYKLVVVGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 60 usage_00131.pdb 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60 usage_00229.pdb 1 -REYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 59 usage_00249.pdb 1 -REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 59 usage_00251.pdb 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 60 usage_00273.pdb 1 ---YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISC--SICTLQITDTTG 55 usage_00279.pdb 1 -REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 59 usage_00280.pdb 1 -REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 59 G gvGKS L f g f y P e yr l I Dt G usage_00003.pdb 60 ---QEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKN-VTLILVGNK 115 usage_00010.pdb 60 --TE----MRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 112 usage_00011.pdb 61 --TE---AMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 114 usage_00019.pdb 60 TEQF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTED-VPMILVGNK 116 usage_00064.pdb 60 --TT---AMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTED-VPMILVGNK 113 usage_00065.pdb 60 --T------RDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTED-VPMILVGNK 110 usage_00067.pdb 61 TEQF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTED-VPMILVGNK 117 usage_00069.pdb 58 SHQF--PAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNK 115 usage_00072.pdb 59 -PP------ELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASE-VPMVLVGTQ 110 usage_00128.pdb 61 TEQF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 117 usage_00129.pdb 61 TEQF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 117 usage_00131.pdb 61 TEQF--ASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEK-VPVILVGNK 117 usage_00229.pdb 60 TEQF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 116 usage_00249.pdb 60 TEQF--ASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEK-VPVILVGNK 116 usage_00251.pdb 61 --TF--TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 115 usage_00273.pdb 56 SHQF--PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIK---S-IPIMLVGNK 109 usage_00279.pdb 60 TEQF--AAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 116 usage_00280.pdb 60 TEQF--AAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDD-VPMILVGNK 116 g f lV s k p LVGnk usage_00003.pdb 116 ADLDH---SRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRR 167 usage_00010.pdb 113 CDLED---ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR-- 162 usage_00011.pdb 115 CDLED---ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR-- 164 usage_00019.pdb 117 CDLED---ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR-- 166 usage_00064.pdb 114 CDLED---ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR-- 163 usage_00065.pdb 111 CDLED---ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQIN--- 159 usage_00067.pdb 118 CDLED---ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR-- 167 usage_00069.pdb 116 CDET----QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELLTL----- 160 usage_00072.pdb 111 -DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALR 164 usage_00128.pdb 118 CDLED---ERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQI---- 165 usage_00129.pdb 118 CDLED---ERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQIN--- 166 usage_00131.pdb 118 VDLES---EREVSSSEGRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQMNY-- 166 usage_00229.pdb 117 CDLED---ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR-- 166 usage_00249.pdb 117 VDLES---EREVSSSEGRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQMNYA- 166 usage_00251.pdb 116 CDLED---ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQIN--- 164 usage_00273.pdb 110 CDESP---SREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQELLNLE---- 156 usage_00279.pdb 117 CDLED---ERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQINR-- 166 usage_00280.pdb 117 CDLED---ERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQINR-- 166 D R v la c e a v e F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################