################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:35 2021 # Report_file: c_0476_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00020.pdb # 4: usage_00047.pdb # 5: usage_00063.pdb # 6: usage_00072.pdb # 7: usage_00075.pdb # # Length: 79 # Identity: 20/ 79 ( 25.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 79 ( 25.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 79 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 QIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNML-D--QLGDQSMRIKHLLPRNTQIV 57 usage_00006.pdb 1 QIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNML-D--QLGDQSMRIKHLLPRNTQIV 57 usage_00020.pdb 1 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD-MRRDVQEIFRMTPHEKQVM 59 usage_00047.pdb 1 QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQG-LGDQCIRVKRFLPKDTQLV 59 usage_00063.pdb 1 QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQG-LGDQCIRVKRFLPKDTQLV 59 usage_00072.pdb 1 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD-MRRDVQEIFRMTPHEKQVM 59 usage_00075.pdb 1 QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQG-LGDQCIRVKRFLPKDTQLV 59 GTPG L IK F LDE D ML P Q usage_00005.pdb 58 LFSATFSERVEKYAER--- 73 usage_00006.pdb 58 LFSATFSERVEKYAER--- 73 usage_00020.pdb 60 MFSATLSKEIRPVCRK--- 75 usage_00047.pdb 60 LFSATFADAVRQYAKKIVP 78 usage_00063.pdb 60 LFSATFADAVRQYAKKIV- 77 usage_00072.pdb 60 MFSATLSKEIRPVCRKF-- 76 usage_00075.pdb 60 LFSATFADAVRQYAKKIV- 77 FSAT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################