################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:44 2021 # Report_file: c_0918_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00054.pdb # 2: usage_00071.pdb # 3: usage_00105.pdb # 4: usage_00106.pdb # 5: usage_00183.pdb # 6: usage_00188.pdb # 7: usage_00229.pdb # 8: usage_00231.pdb # 9: usage_00233.pdb # 10: usage_00331.pdb # 11: usage_00341.pdb # 12: usage_00342.pdb # 13: usage_00373.pdb # # Length: 55 # Identity: 39/ 55 ( 70.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 55 ( 76.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 55 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 GGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00071.pdb 1 GGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00105.pdb 1 GGASVVCFLNNFYPKDINVKWNIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00106.pdb 1 GGASVVCFLNNFYPKDINVKWNIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00183.pdb 1 GGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00188.pdb 1 -GASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 54 usage_00229.pdb 1 GGASVVCFLNNFYPKDINVRWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00231.pdb 1 GGASVVCFLNNFYPKDINVKWKIDGKERQNGVLNSWTDQNSKDSTYSMSSTLTLT 55 usage_00233.pdb 1 GGASVVCFLNNFYPKDINVKWKID--R-QNGVLNSWTDQDSKDSTYSMSSTLTLT 52 usage_00331.pdb 1 ----VVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 51 usage_00341.pdb 1 GGASVVCFLNNFYPKDINVKWNIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00342.pdb 1 GGASVVCFLNNFYPKDINVKWNIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 55 usage_00373.pdb 1 ---------NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 46 NNFYPKDINVkW ID e QNGVLNSWTDQdSKDSTYSMSSTLTLT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################