################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:50 2021 # Report_file: c_0677_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00127.pdb # 2: usage_00298.pdb # 3: usage_00915.pdb # 4: usage_00917.pdb # 5: usage_00978.pdb # 6: usage_00981.pdb # 7: usage_01047.pdb # 8: usage_01248.pdb # 9: usage_01337.pdb # 10: usage_01581.pdb # 11: usage_01586.pdb # 12: usage_01611.pdb # # Length: 76 # Identity: 48/ 76 ( 63.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/ 76 ( 86.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 76 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00127.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_00298.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_00915.pdb 1 GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_00917.pdb 1 GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_00978.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_00981.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_01047.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_01248.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_01337.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_01581.pdb 1 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRA 60 usage_01586.pdb 1 GVSTDPQAYKES--N--YSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSP 56 usage_01611.pdb 1 GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRA 60 GVcTDPQplKEq l srY LSSRLRVSATFWq PRNHFRCQVQFyGLSEnDeWtqdra usage_00127.pdb 61 KPVTQIVSAEAWG--- 73 usage_00298.pdb 61 KPVTQIVSAEAW---- 72 usage_00915.pdb 61 KPVTQIVSAEAWG--- 73 usage_00917.pdb 61 KPVTQIVSAEAW---- 72 usage_00978.pdb 61 KPVTQIVSAEAW---- 72 usage_00981.pdb 61 KPVTQIVSAEAWG--- 73 usage_01047.pdb 61 KPVTQIVSAEAWGRA- 75 usage_01248.pdb 61 KPVTQIVSAEAWG--- 73 usage_01337.pdb 61 KPVTQIVSAEAWGRAD 76 usage_01581.pdb 61 KPVTQIVSAEAWGRA- 75 usage_01586.pdb 57 KPVTQDISAEAWGRA- 71 usage_01611.pdb 61 KPVTQIVSAEAW---- 72 KPVTQivSAEAW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################