################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:49 2021 # Report_file: c_1105_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00313.pdb # 2: usage_00316.pdb # 3: usage_00366.pdb # 4: usage_00719.pdb # 5: usage_00794.pdb # 6: usage_00795.pdb # 7: usage_00863.pdb # # Length: 101 # Identity: 36/101 ( 35.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/101 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/101 ( 54.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00313.pdb 1 VCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAK-- 58 usage_00316.pdb 1 -------AKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVF 53 usage_00366.pdb 1 -------AKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVF 53 usage_00719.pdb 1 -------AKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVF 53 usage_00794.pdb 1 ------------LGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVF 48 usage_00795.pdb 1 --------KDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVF 52 usage_00863.pdb 1 -------AKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVF 53 LG FLYEY RRHPDYSV LLLR AKTYE TLEKCCA ADP CY usage_00313.pdb ----------------------------------------- usage_00316.pdb 54 DEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKV 94 usage_00366.pdb 54 DEFKPLVEEPQNLIKQNCELFEQLGEYKFQ----------- 83 usage_00719.pdb 54 DEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKV 94 usage_00794.pdb 49 DQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKA 89 usage_00795.pdb 53 DQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKA 93 usage_00863.pdb 54 DEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKV 94 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################