################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:00 2021 # Report_file: c_0612_34.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00572.pdb # 2: usage_00830.pdb # 3: usage_00982.pdb # 4: usage_01016.pdb # 5: usage_01017.pdb # 6: usage_01018.pdb # # Length: 82 # Identity: 49/ 82 ( 59.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 82 ( 73.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 82 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00572.pdb 1 EYSDAKDADLVVITAGAP-----TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 55 usage_00830.pdb 1 TYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVD 60 usage_00982.pdb 1 SYEDCKDADLVVITAGLPQ----TRLDLVEKNAKIFKQIVRSI-DSGFDGIFLIATNPVD 55 usage_01016.pdb 1 EYSDAKDADLVVITAGAP---GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 57 usage_01017.pdb 1 EYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 60 usage_01018.pdb 1 EYSDAKDADLVVITAGAP---GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 57 Y D KDADlVvItAGap TRLdLV KNlKI K IV i dSGF GIFLvA NPVD usage_00572.pdb 56 ILTYATWKLSGFPKNRVVGS-- 75 usage_00830.pdb 61 ILTYATWKFSGLPKERVIGS-- 80 usage_00982.pdb 56 ILTYVTWKESGLPKERVIGSGT 77 usage_01016.pdb 58 ILTYATWKLSGFPKNRVVGS-- 77 usage_01017.pdb 61 ILTYATWKLSGFPKNRVVGS-- 80 usage_01018.pdb 58 ILTYATWKLSGFPKNRVVGS-- 77 ILTYaTWK SG PK RV GS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################