################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:19:45 2021 # Report_file: c_0874_12.html ################################################################################################ #==================================== # Aligned_structures: 45 # 1: usage_00001.pdb # 2: usage_00005.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # 9: usage_00053.pdb # 10: usage_00054.pdb # 11: usage_00072.pdb # 12: usage_00073.pdb # 13: usage_00098.pdb # 14: usage_00099.pdb # 15: usage_00100.pdb # 16: usage_00116.pdb # 17: usage_00121.pdb # 18: usage_00131.pdb # 19: usage_00137.pdb # 20: usage_00139.pdb # 21: usage_00140.pdb # 22: usage_00171.pdb # 23: usage_00175.pdb # 24: usage_00177.pdb # 25: usage_00178.pdb # 26: usage_00179.pdb # 27: usage_00181.pdb # 28: usage_00182.pdb # 29: usage_00183.pdb # 30: usage_00184.pdb # 31: usage_00185.pdb # 32: usage_00186.pdb # 33: usage_00189.pdb # 34: usage_00190.pdb # 35: usage_00191.pdb # 36: usage_00192.pdb # 37: usage_00193.pdb # 38: usage_00194.pdb # 39: usage_00195.pdb # 40: usage_00196.pdb # 41: usage_00197.pdb # 42: usage_00198.pdb # 43: usage_00204.pdb # 44: usage_00208.pdb # 45: usage_00219.pdb # # Length: 95 # Identity: 5/ 95 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 95 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 95 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00005.pdb 1 NEDDV---KSLSRVMI-HV-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 46 usage_00047.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00048.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00049.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00050.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00051.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00052.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00053.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00054.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00072.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00073.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00098.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00099.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00100.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00116.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00121.pdb 1 ----VKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 45 usage_00131.pdb 1 --NRFELVALMADSVLSDS-------PGPTWGRVVTLVTFAGTLLERGPLVTAGDVARDS 51 usage_00137.pdb 1 -------LSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 42 usage_00139.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00140.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00171.pdb 1 -------FSRVMVHVF-KD-------GVTNWGRIVTLISFGAFVAKH-LKSVN--QESFI 42 usage_00175.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00177.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00178.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00179.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00181.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00182.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00183.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00184.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00185.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00186.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00189.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00190.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00191.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00192.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00193.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00194.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00195.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00196.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 usage_00197.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00198.pdb 1 -EDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 48 usage_00204.pdb 1 NEDDVKSLSRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 49 usage_00208.pdb 1 --------TTGIDQLG-LSMLQVSGDGNMNWGRALAILTFGSFVAQK-LS--N--EPHLR 46 usage_00219.pdb 1 --------SRVMIHVF-SD-------GVTNWGRIVTLISFGAFVAKH-LKTIN--QESCI 41 g nWGR vtl Fg fva l n usage_00001.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 82 usage_00005.pdb 47 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 79 usage_00047.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00048.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00049.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 81 usage_00050.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00051.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 73 usage_00052.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00053.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00054.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 80 usage_00072.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 73 usage_00073.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00098.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 81 usage_00099.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 82 usage_00100.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 81 usage_00116.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 80 usage_00121.pdb 46 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 78 usage_00131.pdb 52 QRLVALLSSRLMGQH-RAWLQAQGGWDGFSHFFRT 85 usage_00137.pdb 43 APLAESITDVLVRTK-RDWLVAQRGWDGFVEFF-- 74 usage_00139.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00140.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00171.pdb 43 EPLAETITDVLVRTK-RDWLVKQRGWDGFVEFF-- 74 usage_00175.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEF--- 79 usage_00177.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00178.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 73 usage_00179.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00181.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00182.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00183.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 73 usage_00184.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00185.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00186.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00189.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 73 usage_00190.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00191.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00192.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00193.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEF--- 79 usage_00194.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00195.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00196.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 usage_00197.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 82 usage_00198.pdb 49 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 81 usage_00204.pdb 50 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFF-- 81 usage_00208.pdb 47 DFALAVLPAYAYEAIGPQWFRAR------------ 69 usage_00219.pdb 42 EPLAESITDVLVRTK-RDWLVKQRGWDGFVEFFH- 74 l l r Wl q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################