################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:17:20 2021 # Report_file: c_0209_9.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00071.pdb # 2: usage_00075.pdb # 3: usage_00076.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00117.pdb # 7: usage_00118.pdb # 8: usage_00131.pdb # 9: usage_00133.pdb # 10: usage_00144.pdb # 11: usage_00149.pdb # 12: usage_00211.pdb # 13: usage_00212.pdb # 14: usage_00213.pdb # 15: usage_00305.pdb # 16: usage_00306.pdb # 17: usage_00326.pdb # 18: usage_00327.pdb # 19: usage_00331.pdb # 20: usage_00340.pdb # 21: usage_00341.pdb # 22: usage_00342.pdb # 23: usage_00357.pdb # 24: usage_00375.pdb # 25: usage_00382.pdb # 26: usage_00419.pdb # # Length: 113 # Identity: 42/113 ( 37.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/113 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/113 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 -IVMTQSPDSLAVSLGERATINCKSSQSVLYSSNSKNYLAWYQQKPGQPPKLLIYWASTR 59 usage_00075.pdb 1 -IVLAQSPDSLAVSPGERATIHCKSSQ---------HSIAWYQQRPGQPPKLLLYWASMR 50 usage_00076.pdb 1 -IVLAQSPDSLAVSPGERATIHCKSSQ---------HSIAWYQQRPGQPPKLLLYWASMR 50 usage_00115.pdb 1 --MMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00116.pdb 1 NIMMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00117.pdb 1 --MMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00118.pdb 1 NIMMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00131.pdb 1 ELVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWASTR 60 usage_00133.pdb 1 --VMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTR 58 usage_00144.pdb 1 -IVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTR 59 usage_00149.pdb 1 DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNSTNYLAWYQQKPGQPPKLLIYWASTR 60 usage_00211.pdb 1 --VMTQTPSSLAMSVGQKVTMSCKSSQSLLNISNQKNYLAWYQQKPGQSPKLLVYFASTR 58 usage_00212.pdb 1 --VMTQTPSSLAMSVGQKVTMSCKSSQSLLNISNQKNYLAWYQQKPGQSPKLLVYFASTR 58 usage_00213.pdb 1 --VMTQTPSSLAMSVGQKVTMSCKSSQSLLNISNQKNYLAWYQQKPGQSPKLLVYFASTR 58 usage_00305.pdb 1 -IVMSQSPSSLAVSVGEKVTMSCKSSQSLLYRGNQMNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00306.pdb 1 --VMSQSPSSLAVSVGEKVTMSCKSSQSLLYRGNQMNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00326.pdb 1 -LVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWASTR 59 usage_00327.pdb 1 ELVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWASTR 60 usage_00331.pdb 1 --VMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTR 58 usage_00340.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00341.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00342.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00357.pdb 1 -IVMTQSPDSLAVSLGERATINCKSSQSVLYSSNSKNYLAWYQQKPGQPPKLLIYWASTR 59 usage_00375.pdb 1 DIVMTQSPSSLAMSVGQKVTLSCKSSQSLLNTSNQKNYLAWYQQKPGQSPKLLVYFASTR 60 usage_00382.pdb 1 -IVMTQSPDSLAVSLGERATINCKASQSVT------NDVAWYQQKPGQPPKLLIYYASNR 53 usage_00419.pdb 1 --VMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTR 58 Q P SL s G T CksSQ aWYQQ PGQ PKlL Y AS R usage_00071.pdb 60 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQYYSTPYSFGQGTKLEI- 111 usage_00075.pdb 51 LSGVPDRFSGSGSGTDFTLTINNLQAEDVAIYYCHQYSSHPPTFGHGTRVEL- 102 usage_00076.pdb 51 LSGVPDRFSGSGSGTDFTLTINNLQAEDVAIYYCHQYSSHPPTFGHGTRVEL- 102 usage_00115.pdb 59 ESGVPDRFTGSGSGTDFTLTISSVQTEDLAVYYCHQYLSSYMYTFGGGTKLEI 111 usage_00116.pdb 61 ESGVPDRFTGSGSGTDFTLTISSVQTEDLAVYYCHQYLSSYMYTFGGGTKLEI 113 usage_00117.pdb 59 ESGVPDRFTGSGSGTDFTLTISSVQTEDLAVYYCHQYLSSYMYTFGGGTKLEI 111 usage_00118.pdb 61 ESGVPDRFTGSGSGTDFTLTISSVQTEDLAVYYCHQYLSSYMYTFGGGTKLEI 113 usage_00131.pdb 61 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEI- 112 usage_00133.pdb 59 ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLEL- 110 usage_00144.pdb 60 ESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEI-- 110 usage_00149.pdb 61 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYSFGQGTKLEI- 112 usage_00211.pdb 59 ESGVPDRFIGSGSGTDFTLTISSVQAEDQADYFCQQHYRAPRTFGGGTKLEIK 111 usage_00212.pdb 59 ESGVPDRFIGSGSGTDFTLTISSVQAEDQADYFCQQHYRAPRTFGGGTKLEIK 111 usage_00213.pdb 59 ESGVPDRFIGSGSGTDFTLTISSVQAEDQADYFCQQHYRAPRTFGGGTKLEIK 111 usage_00305.pdb 60 ESGVPDRFTGSGSGTEFTLTISSVKAEDLTVYYCQQYYTYPRTFGGGTKLEI- 111 usage_00306.pdb 59 ESGVPDRFTGSGSGTEFTLTISSVKAEDLTVYYCQQYYTYPRTFGGGTKLEI- 110 usage_00326.pdb 60 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEI- 111 usage_00327.pdb 61 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEI- 112 usage_00331.pdb 59 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGQGTKVEI- 110 usage_00340.pdb 60 ESGVPDRFTGTGSGTDFTLTISSVKAEDLAVYYCQQYYSYPLTFGAGTKLEL- 111 usage_00341.pdb 60 ESGVPDRFTGTGSGTDFTLTISSVKAEDLAVYYCQQYYSYPLTFGAGTKLEL- 111 usage_00342.pdb 60 ESGVPDRFTGTGSGTDFTLTISSVKAEDLAVYYCQQYYSYPLTFGAGTKLEL- 111 usage_00357.pdb 60 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCAQYYSTPYSFGQGTKLEI- 111 usage_00375.pdb 61 ESGVPDRFIGSGSGTDFTLTISSVQAEDLSDFFCQQHYSTPYTFGGGTKLEI- 112 usage_00382.pdb 54 YTGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQDYSSPYTFGQGTKVEI- 105 usage_00419.pdb 59 ESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGQGTKVEI- 110 sGVPDRF G GSGT FTLTI ED y C q g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################