################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:12 2021 # Report_file: c_1297_289.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00083.pdb # 2: usage_00665.pdb # 3: usage_00666.pdb # 4: usage_00965.pdb # 5: usage_01770.pdb # 6: usage_01865.pdb # 7: usage_02299.pdb # 8: usage_02300.pdb # 9: usage_02301.pdb # 10: usage_02593.pdb # 11: usage_02601.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 61 ( 23.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 61 ( 57.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 ----STQERLKEWN---------VSYGTALVADRQTKGRGRLGRKWLSQ-EGGLYFSFLL 46 usage_00665.pdb 1 SLKELDFKLRKHLIDKHDLYKTEP-KDSKIRVTM---------------KNGDFYTFE-- 42 usage_00666.pdb 1 SLKELDFKLRKHLIDKHDLYKTEP-KDSKIRVTM---------------KNGDFYTFELN 44 usage_00965.pdb 1 SLKELDFKLRKKLMEEEKLYGAVNNRKGKIVVKM---------------EDDKFYTFELT 45 usage_01770.pdb 1 SLKELDFKLRQYLIQNFDLYKKFP-KDSKIKVIM---------------KDGGYYTFELN 44 usage_01865.pdb 1 SLKELDFKLRKQLIEKHNLYGNMG--SGTIVIKM---------------KNGGKYTFELH 43 usage_02299.pdb 1 SLKELDFKLRKKLMEEEKLYGAVNNRKGKIVVKM---------------EDDKFYTFELT 45 usage_02300.pdb 1 SLKELDFKLRKKLMEEEKLYGAVNNRKGKIVVKM---------------EDDKFYTFELT 45 usage_02301.pdb 1 SLKELDFKLRKKLMEEEKLYGAVNNRKGKIVVKM---------------EDDKFYTFELT 45 usage_02593.pdb 1 SLKELDFKLRKQLIEKHNLYG--NMGSGTIVIKM---------------KNGGKYTFELH 43 usage_02601.pdb 1 SLKELDFKLRKQLIEKNNLYGN--VGSGKIVIKM---------------KNGGKYTFELH 43 ldfklrk l i m Ytfe usage_00083.pdb 47 N 47 usage_00665.pdb - usage_00666.pdb - usage_00965.pdb - usage_01770.pdb - usage_01865.pdb - usage_02299.pdb - usage_02300.pdb - usage_02301.pdb - usage_02593.pdb - usage_02601.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################