################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:52 2021 # Report_file: c_1159_111.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00047.pdb # 2: usage_00440.pdb # 3: usage_00543.pdb # 4: usage_00703.pdb # 5: usage_00775.pdb # 6: usage_01002.pdb # 7: usage_01006.pdb # 8: usage_01074.pdb # 9: usage_01454.pdb # 10: usage_01497.pdb # 11: usage_01636.pdb # 12: usage_01906.pdb # 13: usage_01929.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 64 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/ 64 ( 85.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 --VDMCVVD-LERQ---GQGQLVTCS-GA-FK--E-----GSLRIIRN------------ 33 usage_00440.pdb 1 -VELCVAEVAHY--GETKRPELYRIT-Y----------D-GSIADEP------------- 32 usage_00543.pdb 1 -IAEIQKQG-Q-------GQWTYQIY-QE-PF--K----NLKTGKYAR------------ 31 usage_00703.pdb 1 --GGRLILP-VGPAGGNQMLEQYDKL-Q----------D-GSIKMKP------------- 32 usage_00775.pdb 1 TDVRLRKIQ-TD-----G-RKALVSI-TLDEA--FV----IHDLRVIE------------ 34 usage_01002.pdb 1 --VDMCVVD-LERQ---GQGQLVTCS-GA-FK--E-----GSLRIIRN------------ 33 usage_01006.pdb 1 --VDMCVVD-LERQ---GQGQLVTCS-GA-FK--E-----GSLRIIRN------------ 33 usage_01074.pdb 1 ---TIRKDG---------LKLVGSWKKDR---ATG-DADEPELRVLST------------ 32 usage_01454.pdb 1 --VDMCVVD-Q--------GQLVTCS-GA-FK--E-----GSLRIIRN------------ 28 usage_01497.pdb 1 --VDMCVVD-LERQ---GQGQLVTCS-GA-FK--E-----GSLRIIRN------------ 33 usage_01636.pdb 1 ---VSVDLP-G---------SMKVLV-SKSSNA-D-----GKYDLI-------------- 26 usage_01906.pdb 1 --TSICKTN-LVV---GGQDVLVWSG-I----------Q-GTVGVLIP------------ 30 usage_01929.pdb 1 -----------------------RWA-VD-KD--G-----LR-LGQK-CSGESVDSCAKI 26 usage_00047.pdb ---- usage_00440.pdb ---- usage_00543.pdb ---- usage_00703.pdb ---- usage_00775.pdb ---- usage_01002.pdb ---- usage_01006.pdb ---- usage_01074.pdb ---- usage_01454.pdb ---- usage_01497.pdb ---- usage_01636.pdb 27 -AT- 28 usage_01906.pdb ---- usage_01929.pdb 27 VK-R 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################