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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:56:59 2021
# Report_file: c_0840_24.html
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#====================================
# Aligned_structures: 8
#   1: usage_00391.pdb
#   2: usage_00392.pdb
#   3: usage_00543.pdb
#   4: usage_00544.pdb
#   5: usage_00545.pdb
#   6: usage_00546.pdb
#   7: usage_00547.pdb
#   8: usage_00548.pdb
#
# Length:         81
# Identity:       32/ 81 ( 39.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     32/ 81 ( 39.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 81 ( 13.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00391.pdb         1  -FRPAFCYLLASLKQLYPAARIYNITNSELSEEVTDS-DEICRHYGIENIRLHDIDKQWG   58
usage_00392.pdb         1  --RPAFCYLLASLKQLYPAARIYNITNSELSEEVTDS-DEICRHYGIENIRLHDIDKQWG   57
usage_00543.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
usage_00544.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
usage_00545.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
usage_00546.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
usage_00547.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
usage_00548.pdb         1  R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG   56
                                  YLL      YP   IY   NS L EE   S   IC HY I  I LHDIDK  G

usage_00391.pdb        59  HPSVQGQSIDAQVWESV-SPI   78
usage_00392.pdb        58  HPSVQGQSIDAQVWESV-SPI   77
usage_00543.pdb        57  HPSIKGEQISEQIKFR-----   72
usage_00544.pdb        57  HPSIKGEQISEQIKFR-----   72
usage_00545.pdb        57  HPSIKGEQISEQIKFRKT---   74
usage_00546.pdb        57  HPSIKGEQISEQIKFR-----   72
usage_00547.pdb        57  HPSIKGEQISEQIKFRK----   73
usage_00548.pdb        57  HPSIKGEQISEQIKFRKT---   74
                           HPS  G  I  Q         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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