################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:04 2021 # Report_file: c_0040_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00015.pdb # 6: usage_00059.pdb # 7: usage_00114.pdb # # Length: 266 # Identity: 29/266 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/266 ( 30.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 83/266 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --LSIALAMGMMEL--GAQGSTQKEIRHSMGYDS----------------EEFSFLKEF- 39 usage_00010.pdb 1 SPLSIALAMGMMEL--GAQGSTQKEIRHSMGYDSL---------------EEFSFLKEFS 43 usage_00013.pdb 1 SPLSIALAMGMMEL--GAQGSTQKEIRHSMG-Y-D-----------G---EEFSFLKEFS 42 usage_00014.pdb 1 SPLSIALAMGMMEL--GAQGSTQKEIRHSM---------------------EFSFLKEFS 37 usage_00015.pdb 1 SPLSIALAMGMMEL--GAQGSTQKEIRHSMG-Y-D----------------EFSFLKEFS 40 usage_00059.pdb 1 SPFSIQTCAAMARL--GAENETATQLDQGLGLA--S-------SDPE---QIAHSFHQVL 46 usage_00114.pdb 1 --LGILFTLGILLGSGGAQGRTGYQIGKTR------LKSTSSSWNSSEAQQEKSLYQELN 52 lsI gm l GAqg T i e s e usage_00009.pdb 40 ---------Y-------VMKIANSLFVQNGFHV-NEEFLQMMKKYFNAAVNHVDFSQNVA 82 usage_00010.pdb 44 -------SQY-------VMKIANSLFVQNGFHV-NEEFLQMMKKYFNAAVNHVDFSQNVA 88 usage_00013.pdb 43 NMVTA-ESQY-------VMKIANSLFVQNGFHVNEEFLQMM-KKYFNAAVNHVDFSQNVA 93 usage_00014.pdb 38 NMVTAKESQY-------VMKIANSLFVQNGFHVNEEFLQMM-KKYFNAAVNHVDFSQNVA 89 usage_00015.pdb 41 NMVTAKESQY-------VMKIANSLFVQNGFHVNEEFLQMM-KKYFNAAVNHVDFSQNVA 92 usage_00059.pdb 47 AAYQD-SQ---------ILRIANKIFVMDGYQLRQEFDQLL-SKQFLSAAQSVDFSKNVQ 95 usage_00114.pdb 53 NSLTS-E---KTFLEENVVRISTGIFVEKTYEVERRFNESI-ANDSEGELKQVDFSNRTS 107 v Ian FV g v e k f a VDFS nv usage_00009.pdb 83 VANYINKWVENNTNNLVKDLVSPRDFDAATY----LALINAVYFKGNWKSQFRPENTRTF 138 usage_00010.pdb 89 VANYINKWVENNTNNLVKDLVSPRDFDAATY----LALINAVYFKGNWKSQFRPENTRTF 144 usage_00013.pdb 94 VANYINKWVENNTNNLVKDLVSPRDFDAATY----LALINAVYFKGNWKSQFRPENTRTF 149 usage_00014.pdb 90 VANYINKWVENNTNNLVKDLVSPRDFDAATY----LALINAVYFKGNWKSQFRPENTRTF 145 usage_00015.pdb 93 VANYINKWVENNTNNLVKDLVSPRDFDAATY----LALINAVYFKGNWKSQFRPENTRTF 148 usage_00059.pdb 96 AAATINNWVEQRTNHLIKDLVPADVLNSESR----LVLVNAIHFKGTWQHQFAKHLTRPD 151 usage_00114.pdb 108 ATVDINDWVDQQSNGLL--------------PDDTAILVNVFYFRDFWQSPFEPHYTRKE 153 a IN WVe tN L l L Na yFkg W sqF p TR usage_00009.pdb 139 SFTKDDESEVQIPMMYQQGEFYYGEFSDGS--G-G-IYQVLEIPYEGDEISMMLVLSRQE 194 usage_00010.pdb 145 SFTKDDESEVQIPMMYQQGEFYYGEFSDGSN-G-G-IYQVLEIPYEGDEISMMLVLSRQE 201 usage_00013.pdb 150 SFTKDDESEVQIPMMYQQGEFYYGEFSD-G----G-IYQVLEIPYEGDEISMMLVLSRQE 203 usage_00014.pdb 146 SFTKDDESEVQIPMMYQQGEFYYGEFSDGS-NEAG-IYQVLEIPYEGDEISMMLVLSRQE 203 usage_00015.pdb 149 SFTKDDESEVQIPMMYQQGEFYYGEFSD------G-IYQVLEIPYEGDEISMMLVLSRQE 201 usage_00059.pdb 152 TFHLDGERTVQVPMMSLKERFRYADLPA-------LDAMALELPYKDSDLSMLIVLPNTK 204 usage_00114.pdb 154 DFYISPDRQITVD--TQEGV-KYGKFED-------EGFEIVSKPLNNTRFTFVIVLPLEK 203 F d e vq p q g Yg f d le Py sm VL usage_00009.pdb 195 VPLATLEPLV-KAQ---LVEEWAN-- 214 usage_00010.pdb 202 VPLATLEPLV-KAQ---LVEEWAN-- 221 usage_00013.pdb 204 VPLATLEPLV-KAQ---LVEEWANS- 224 usage_00014.pdb 204 VPLATLEPLV-KAQ---LVEEWAN-- 223 usage_00015.pdb 202 VPLATLEPLV-KAQ---LVEEWANS- 222 usage_00059.pdb 205 TGLPALEEKL-R---LTTLSQITQS- 225 usage_00114.pdb 204 WS-LNGATELLN--GNKVLSEYVKNL 226 le e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################