################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:42:01 2021 # Report_file: c_0024_2.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00003.pdb # 2: usage_00008.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00095.pdb # 6: usage_00096.pdb # 7: usage_00097.pdb # 8: usage_00098.pdb # 9: usage_00099.pdb # 10: usage_00100.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00107.pdb # 14: usage_00108.pdb # 15: usage_00109.pdb # 16: usage_00234.pdb # 17: usage_00235.pdb # 18: usage_00236.pdb # 19: usage_00237.pdb # 20: usage_00238.pdb # 21: usage_00475.pdb # 22: usage_00476.pdb # # Length: 250 # Identity: 142/250 ( 56.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/250 ( 65.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/250 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --SERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKI 58 usage_00008.pdb 1 --SERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLSDLAGCIKTLRYCAGWADKI 58 usage_00032.pdb 1 --SERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLSDLAGCIKTLRYCAGWADKI 58 usage_00033.pdb 1 --SERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKI 58 usage_00095.pdb 1 DASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKI 60 usage_00096.pdb 1 DASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKI 60 usage_00097.pdb 1 DASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKI 60 usage_00098.pdb 1 DASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKI 60 usage_00099.pdb 1 DASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKI 60 usage_00100.pdb 1 --SERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLSDLAGCIKTLRYCAGWADKI 58 usage_00105.pdb 1 DASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKI 60 usage_00106.pdb 1 --SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 58 usage_00107.pdb 1 --SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 58 usage_00108.pdb 1 ----------------------LATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 38 usage_00109.pdb 1 --------------------LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 40 usage_00234.pdb 1 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 60 usage_00235.pdb 1 ----------------------LATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 38 usage_00236.pdb 1 ----------------------LATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 38 usage_00237.pdb 1 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 60 usage_00238.pdb 1 ----------------------LATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 38 usage_00475.pdb 1 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 60 usage_00476.pdb 1 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 60 LATmE NgGK A DL g IKtlRY AGWADKI usage_00003.pdb 59 QGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPL 118 usage_00008.pdb 59 QGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPL 118 usage_00032.pdb 59 QGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPL 118 usage_00033.pdb 59 QGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPL 118 usage_00095.pdb 61 HGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPL 120 usage_00096.pdb 61 HGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPL 120 usage_00097.pdb 61 HGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPL 120 usage_00098.pdb 61 HGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPL 120 usage_00099.pdb 61 HGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPL 120 usage_00100.pdb 59 QGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPL 118 usage_00105.pdb 61 QGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPL 120 usage_00106.pdb 59 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 118 usage_00107.pdb 59 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 118 usage_00108.pdb 39 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 98 usage_00109.pdb 41 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 100 usage_00234.pdb 61 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 120 usage_00235.pdb 39 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 98 usage_00236.pdb 39 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 98 usage_00237.pdb 61 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 120 usage_00238.pdb 39 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 98 usage_00475.pdb 61 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 120 usage_00476.pdb 61 QGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 120 G TIP DG Ft TR EP GVCGqIiPWNfPl m wKI PAL CGNTVv KPAEQTPL usage_00003.pdb 119 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGK 178 usage_00008.pdb 119 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGK 178 usage_00032.pdb 119 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGK 178 usage_00033.pdb 119 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGK 178 usage_00095.pdb 121 SALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 180 usage_00096.pdb 121 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 180 usage_00097.pdb 121 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 180 usage_00098.pdb 121 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 180 usage_00099.pdb 121 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 180 usage_00100.pdb 119 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGK 178 usage_00105.pdb 121 TALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAK 180 usage_00106.pdb 119 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 178 usage_00107.pdb 119 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 178 usage_00108.pdb 99 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 158 usage_00109.pdb 101 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 160 usage_00234.pdb 121 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 180 usage_00235.pdb 99 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 158 usage_00236.pdb 99 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 158 usage_00237.pdb 121 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 180 usage_00238.pdb 99 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 158 usage_00475.pdb 121 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 180 usage_00476.pdb 121 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 180 AL LIKEAGFPPGVvNI PGYGPTAGAAI SH DK AFTGSTEVGKlI EAAg usage_00003.pdb 179 SNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY---- 234 usage_00008.pdb 179 SNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY---- 234 usage_00032.pdb 179 SNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY---- 234 usage_00033.pdb 179 SNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY---- 234 usage_00095.pdb 181 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFV 240 usage_00096.pdb 181 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFV 240 usage_00097.pdb 181 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFV 240 usage_00098.pdb 181 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFV 240 usage_00099.pdb 181 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFV 240 usage_00100.pdb 179 SNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY---- 234 usage_00105.pdb 181 SNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFV 240 usage_00106.pdb 179 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 238 usage_00107.pdb 179 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 238 usage_00108.pdb 159 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 218 usage_00109.pdb 161 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 220 usage_00234.pdb 181 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 240 usage_00235.pdb 159 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 218 usage_00236.pdb 159 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 218 usage_00237.pdb 181 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 240 usage_00238.pdb 159 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 218 usage_00475.pdb 181 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 240 usage_00476.pdb 181 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 240 SNLKRV LELGgKsP I ADADLD AVE AH GVF QGQcC A Sr FVEEsIY usage_00003.pdb ---------- usage_00008.pdb ---------- usage_00032.pdb ---------- usage_00033.pdb ---------- usage_00095.pdb 241 RRSVERAKRR 250 usage_00096.pdb 241 KRSVERAKRR 250 usage_00097.pdb 241 KRSVERAKR- 249 usage_00098.pdb 241 KRSVERAKRR 250 usage_00099.pdb 241 KRSVERAKRR 250 usage_00100.pdb ---------- usage_00105.pdb 241 QRSVERA--- 247 usage_00106.pdb 239 RRSVERAKK- 247 usage_00107.pdb 239 RRSVERAKK- 247 usage_00108.pdb 219 RRSVERAKK- 227 usage_00109.pdb 221 RRSVERAKK- 229 usage_00234.pdb 241 RRSVERAKK- 249 usage_00235.pdb 219 RRSVERAKK- 227 usage_00236.pdb 219 RRSVERAKK- 227 usage_00237.pdb 241 RRSVERAKK- 249 usage_00238.pdb 219 RRSVERAKK- 227 usage_00475.pdb 241 RRSVERAKK- 249 usage_00476.pdb 241 RRSVERAKK- 249 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################