################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:38 2021 # Report_file: c_1414_41.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00104.pdb # 2: usage_00165.pdb # 3: usage_00263.pdb # 4: usage_00309.pdb # 5: usage_00364.pdb # 6: usage_00471.pdb # 7: usage_00472.pdb # 8: usage_00555.pdb # 9: usage_00556.pdb # 10: usage_00562.pdb # # Length: 51 # Identity: 5/ 51 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 51 ( 31.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 51 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 SSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSK---- 47 usage_00165.pdb 1 SQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 51 usage_00263.pdb 1 -KAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRY----- 45 usage_00309.pdb 1 SHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYK---- 47 usage_00364.pdb 1 -PQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRM----- 45 usage_00471.pdb 1 SQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRY----- 46 usage_00472.pdb 1 -QAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKS--- 47 usage_00555.pdb 1 SQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKS--- 48 usage_00556.pdb 1 SQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRY----- 46 usage_00562.pdb 1 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD--- 48 q L f l e la lt qv WFqN R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################