################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:15:04 2021 # Report_file: c_0894_15.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00020.pdb # 2: usage_00024.pdb # 3: usage_00088.pdb # 4: usage_00093.pdb # 5: usage_00120.pdb # 6: usage_00121.pdb # 7: usage_00129.pdb # 8: usage_00254.pdb # 9: usage_00255.pdb # 10: usage_00256.pdb # 11: usage_00340.pdb # 12: usage_00349.pdb # 13: usage_00350.pdb # 14: usage_00351.pdb # 15: usage_00352.pdb # 16: usage_00354.pdb # 17: usage_00375.pdb # 18: usage_00407.pdb # 19: usage_00409.pdb # 20: usage_00413.pdb # 21: usage_00417.pdb # 22: usage_00427.pdb # 23: usage_00430.pdb # 24: usage_00461.pdb # 25: usage_00462.pdb # # Length: 84 # Identity: 11/ 84 ( 13.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 84 ( 13.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 84 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 TAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVK-A 59 usage_00024.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00088.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00093.pdb 1 TAEEKSLVSGLWGKVNVDEVGGEALGRLLIVYPWTQRFFDSFGDLSTPDAVMSNAKVK-A 59 usage_00120.pdb 1 -QEERDEISKTFQGTDMKTVVTQALDRMFKVYPWTNRYFQKRTD-F----------RSSI 48 usage_00121.pdb 1 TQEERDEISKTFQGTDMKTVVTQALDRMFKVYPWTNRYFQKRTD-F---------RSS-I 49 usage_00129.pdb 1 TPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPKVK-A 59 usage_00254.pdb 1 TEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVK-A 59 usage_00255.pdb 1 TEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVK-A 59 usage_00256.pdb 1 -EEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVK-A 58 usage_00340.pdb 1 -PEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 58 usage_00349.pdb 1 SAEEKQLISGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVR-A 59 usage_00350.pdb 1 TPKEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00351.pdb 1 TPKEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00352.pdb 1 TPKEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00354.pdb 1 TPKEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00375.pdb 1 SGEEKSAVTALWGKVNVEEVGGETLGRLLVVYPWTQRFFESFGDLSTASAVMGNPKVK-A 59 usage_00407.pdb 1 TAEEKAAVTAFWGKVHVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVK-A 59 usage_00409.pdb 1 TAEEKGLVNGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSADAIMSNAKVK-A 59 usage_00413.pdb 1 SAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVK-A 59 usage_00417.pdb 1 TAEEKAAVTAFWGKVKVDEVGGEALGRLLVVYPWTQRFFESFGDLSTADAVMNNPKVK-A 59 usage_00427.pdb 1 TAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAILGNPMVR-A 59 usage_00430.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00461.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 usage_00462.pdb 1 TPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVK-A 59 L R VYPWT R F usage_00020.pdb 60 HGKKVLDSFSNGMKHLDDLKGTF- 82 usage_00024.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00088.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00093.pdb 60 HGKKVLNSFSDGLKNLDNLKGTF- 82 usage_00120.pdb 49 HAGIVVGALQDAVKHMDDVKTLF- 71 usage_00121.pdb 50 HAGIVVGALQDAVKHMDDVKTLFK 73 usage_00129.pdb 60 HGKKVLGAFSDGLAHLDNLKGTF- 82 usage_00254.pdb 60 HGKKVLTSLGDAIKHLDDLKGTFA 83 usage_00255.pdb 60 HGKKMLTSLGDAIKHLDDLKGTFA 83 usage_00256.pdb 59 HGKKMLTSLGDAIKHLDDLKGTFA 82 usage_00340.pdb 59 HGKKVLGAFSDGLAHLDNLKGTFA 82 usage_00349.pdb 60 HGKKVLTSFGDAVKNLDNIKNTFA 83 usage_00350.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00351.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00352.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00354.pdb 60 HGKKVLGAFSDGLAHLDNLKGTFA 83 usage_00375.pdb 60 HGKKVLAAFSEGLSHLDN------ 77 usage_00407.pdb 60 HGKKVLDSFSNGMKHLDDLKGTFA 83 usage_00409.pdb 60 HGKKVLNSFSDGLKNIDDLKGAF- 82 usage_00413.pdb 60 HGKKVLTSFGDAVKNLDNIKGTF- 82 usage_00417.pdb 60 HGKKVLDSFSNGMKHLDDLKGTF- 82 usage_00427.pdb 60 HGKKVLTSFGDAVKNLDNIKNTFA 83 usage_00430.pdb 60 HGKKVLGAFSDGLAHLDNLKGTF- 82 usage_00461.pdb 60 HGKKVLGAFSDGLAHLDNLKGTF- 82 usage_00462.pdb 60 HGKKVLGAFSDGLAHLDNLKGTF- 82 H D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################