################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:48:18 2021 # Report_file: c_1012_58.html ################################################################################################ #==================================== # Aligned_structures: 41 # 1: usage_00001.pdb # 2: usage_00050.pdb # 3: usage_00051.pdb # 4: usage_00068.pdb # 5: usage_00069.pdb # 6: usage_00081.pdb # 7: usage_00102.pdb # 8: usage_00103.pdb # 9: usage_00107.pdb # 10: usage_00108.pdb # 11: usage_00135.pdb # 12: usage_00172.pdb # 13: usage_00191.pdb # 14: usage_00192.pdb # 15: usage_00193.pdb # 16: usage_00227.pdb # 17: usage_00281.pdb # 18: usage_00295.pdb # 19: usage_00309.pdb # 20: usage_00369.pdb # 21: usage_00370.pdb # 22: usage_00371.pdb # 23: usage_00402.pdb # 24: usage_00403.pdb # 25: usage_00404.pdb # 26: usage_00405.pdb # 27: usage_00407.pdb # 28: usage_00435.pdb # 29: usage_00452.pdb # 30: usage_00460.pdb # 31: usage_00477.pdb # 32: usage_00498.pdb # 33: usage_00499.pdb # 34: usage_00534.pdb # 35: usage_00535.pdb # 36: usage_00547.pdb # 37: usage_00548.pdb # 38: usage_00560.pdb # 39: usage_00561.pdb # 40: usage_00593.pdb # 41: usage_00594.pdb # # Length: 68 # Identity: 15/ 68 ( 22.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 68 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 68 ( 54.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --IRKKLVIVGDVACGKTCLLIVFSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 52 usage_00050.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 50 usage_00051.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 50 usage_00068.pdb 1 --IRKKLVIVGDGACGKTCLLIVNSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 52 usage_00069.pdb 1 --IRKKLVIVGDGACGKTCLLIVNSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 52 usage_00081.pdb 1 -AIRKKLVIVGDVACGKTCLLIVFSKDQFPAV--YV--PTVF--ENYVADIEVDGKQVEL 53 usage_00102.pdb 1 -----KLVLVGDVQCGKTAMLQVLAKD--CYPETY----VPTVFENYTACLE---QRVEL 46 usage_00103.pdb 1 --ARCKLVLVGDVQCGKTAMLQVLAKD--CYPETY----VPTVFENYTACLETEEQRVEL 52 usage_00107.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00108.pdb 1 ----KKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVAD--------EL 42 usage_00135.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 50 usage_00172.pdb 1 ---RKKLVVVGDGACGKTCLLIVFSKD----E--FP-----F--ENYVADIEVDGKQVEL 44 usage_00191.pdb 1 --VKCKIVVVGDSQCGKTALLHVFAKD--CFPENY----VPTVFENYTASFEIDTQRIEL 52 usage_00192.pdb 1 -----KIVVVGDSQCGKTALLHVFAKD--CFPENY----VPTVFENYTASFEIDTQRIEL 49 usage_00193.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVY---V-PTVFENYIADIEVDGKQVEL 52 usage_00227.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKDQFPEV--YV--PTVF--ENYVADIEVDGKQVEL 52 usage_00281.pdb 1 -VRSVKVVLVGDGGCGKTSLLMVFA-----------DTPTVF--ERYMVNLQVKGKPVHL 46 usage_00295.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 50 usage_00309.pdb 1 AAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 54 usage_00369.pdb 1 ----RKLVIVGDGACGKTCLLIVNSKG--QFPEVY----VPTVFENYVADVEVDGRRVEL 50 usage_00370.pdb 1 ----RKLVIVGDGACGKTCLLIVNSKG--QFPEVY----VPTVFENYVADVEVDGRRVEL 50 usage_00371.pdb 1 ----RKLVIVGDGACGKTCLLIVNSKG--QFPEVY----VPTVFENYVADVEVDGRRVEL 50 usage_00402.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00403.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 53 usage_00404.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00405.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00407.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 53 usage_00435.pdb 1 --IRKKLVIVGDGACGKTCLLIVNSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 52 usage_00452.pdb 1 AAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 54 usage_00460.pdb 1 ----KKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 50 usage_00477.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 53 usage_00498.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNS--------------------NYVADIEVDGKQVEL 39 usage_00499.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNS--------------------NYVADIEVDGKQVEL 39 usage_00534.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNS------PEVYV--PTVF--ENYVADIEVDGKQVEL 49 usage_00535.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNS------PEVYV--PTVF--ENYVADIEVDGKQVEL 49 usage_00547.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 53 usage_00548.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00560.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 53 usage_00561.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVY----VPTVFENYVADIEVDGKQVEL 53 usage_00593.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 usage_00594.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYV--PTVF--ENYVADIEVDGKQVEL 52 K V VGD CGKT L V nY a eL usage_00001.pdb 53 ALWDTAGQ 60 usage_00050.pdb 51 ALWDTAGQ 58 usage_00051.pdb 51 ALWDTAGQ 58 usage_00068.pdb 53 ALWDTAGL 60 usage_00069.pdb 53 ALWDTAGL 60 usage_00081.pdb 54 ALWDT--- 58 usage_00102.pdb 47 SLWDTS-- 52 usage_00103.pdb 53 SLWDTS-- 58 usage_00107.pdb 53 ALWDTA-- 58 usage_00108.pdb 43 ALWDTA-- 48 usage_00135.pdb 51 ALWDTAGQ 58 usage_00172.pdb 45 ALWDTA-- 50 usage_00191.pdb 53 SLWDT--- 57 usage_00192.pdb 50 SLWDT--- 54 usage_00193.pdb 53 ALWDTA-- 58 usage_00227.pdb 53 ALWDT--- 57 usage_00281.pdb 47 HIWD---- 50 usage_00295.pdb 51 ALWDTA-- 56 usage_00309.pdb 55 ALWDTA-- 60 usage_00369.pdb 51 ALWDTAGQ 58 usage_00370.pdb 51 ALWDTAGQ 58 usage_00371.pdb 51 ALWDTAGQ 58 usage_00402.pdb 53 ALWDTAGQ 60 usage_00403.pdb 54 ALWDTAGQ 61 usage_00404.pdb 53 ALWDTAGQ 60 usage_00405.pdb 53 ALWDTAGQ 60 usage_00407.pdb 54 ALWDTA-- 59 usage_00435.pdb 53 ALWDTA-- 58 usage_00452.pdb 55 ALWDTA-- 60 usage_00460.pdb 51 ALWDTA-- 56 usage_00477.pdb 54 ALWDTA-- 59 usage_00498.pdb 40 ALWDTA-- 45 usage_00499.pdb 40 ALWDTA-- 45 usage_00534.pdb 50 ALWDTA-- 55 usage_00535.pdb 50 ALWDTA-- 55 usage_00547.pdb 54 ALWDTAGQ 61 usage_00548.pdb 53 ALWDTAG- 59 usage_00560.pdb 54 ALWDTA-- 59 usage_00561.pdb 54 ALWDTA-- 59 usage_00593.pdb 53 ALWD---- 56 usage_00594.pdb 53 ALWDTA-- 58 lWD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################