################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:33 2021 # Report_file: c_1309_76.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00038.pdb # 2: usage_00428.pdb # 3: usage_00518.pdb # 4: usage_00956.pdb # 5: usage_01262.pdb # 6: usage_01379.pdb # 7: usage_01410.pdb # 8: usage_01413.pdb # 9: usage_01425.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 35 ( 5.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 35 ( 48.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 NKRSIKA-ICENKNGN-PHR-------ENLRIS-- 24 usage_00428.pdb 1 -KRSIKA-ICENKNGN-PHR-------ENLRISKS 25 usage_00518.pdb 1 -KRSIKA-ICENKNGN-PHR-------ENLRISKS 25 usage_00956.pdb 1 -KRSIKA-ICENKNGN-PHR-------ENLRISKS 25 usage_01262.pdb 1 KGITTKY-T----ITQKQ-NP--LIT-NIRGTNI- 25 usage_01379.pdb 1 -KRSIKA-ICENKNGN-PHR-------ENLRIS-- 23 usage_01410.pdb 1 -KRSIKA-ICENKNGN-PHR-------ENLRIS-- 23 usage_01413.pdb 1 TAQEISRKG----EHK-VHFLNPG---AVRVNKS- 26 usage_01425.pdb 1 YKRFIKF-A----RVC-EVD------NELRICAR- 22 ik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################