################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:49:01 2021 # Report_file: c_0470_28.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00006.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00105.pdb # 5: usage_00106.pdb # 6: usage_00117.pdb # 7: usage_00118.pdb # 8: usage_00263.pdb # 9: usage_00292.pdb # 10: usage_00293.pdb # 11: usage_00294.pdb # 12: usage_00295.pdb # 13: usage_00296.pdb # 14: usage_00297.pdb # 15: usage_00321.pdb # 16: usage_00322.pdb # 17: usage_00359.pdb # 18: usage_00360.pdb # 19: usage_00361.pdb # 20: usage_00362.pdb # 21: usage_00434.pdb # 22: usage_00435.pdb # 23: usage_00454.pdb # 24: usage_00455.pdb # 25: usage_00456.pdb # 26: usage_00457.pdb # 27: usage_00478.pdb # 28: usage_00479.pdb # 29: usage_00480.pdb # 30: usage_00481.pdb # 31: usage_00507.pdb # 32: usage_00509.pdb # 33: usage_00511.pdb # 34: usage_00613.pdb # 35: usage_00614.pdb # # Length: 107 # Identity: 85/107 ( 79.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/107 ( 79.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/107 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00037.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKPAPGYHMAKMIIK 60 usage_00038.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKPAPGYHMAKMIIK 60 usage_00105.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDP---FVPRTVIIGGKAAPGYHMAKMIIK 55 usage_00106.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDP---FVPRTVIIGGKAAPGYHMAKMIIK 55 usage_00117.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00118.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00263.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 60 usage_00292.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00293.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00294.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00295.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00296.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00297.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00321.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00322.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00359.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00360.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00361.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00362.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00434.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00435.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00454.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00455.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00456.pdb 1 --DVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 58 usage_00457.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00478.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00479.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00480.pdb 1 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 60 usage_00481.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00507.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00509.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00511.pdb 1 --DVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIK 58 usage_00613.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 usage_00614.pdb 1 MFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIK 60 DVQVKRIHEYKRQLLNCLHVIT YNRIKK P VPRTV IGGK APGYHMAKMIIK usage_00006.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00037.pdb 61 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 107 usage_00038.pdb 61 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 107 usage_00105.pdb 56 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 102 usage_00106.pdb 56 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 102 usage_00117.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00118.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00263.pdb 61 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 107 usage_00292.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00293.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00294.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00295.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00296.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00297.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00321.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00322.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00359.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00360.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00361.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00362.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00434.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00435.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00454.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00455.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00456.pdb 59 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 105 usage_00457.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00478.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00479.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQ--- 102 usage_00480.pdb 61 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 107 usage_00481.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00507.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00509.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00511.pdb 59 LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 105 usage_00613.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 usage_00614.pdb 61 LITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQIST 107 LIT DVVN DP VG L VIFLENYRVSLAEKVIPA DLSEQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################