################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:38 2021 # Report_file: c_0014_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00038.pdb # 5: usage_00046.pdb # 6: usage_00047.pdb # 7: usage_00048.pdb # # Length: 268 # Identity: 85/268 ( 31.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/268 ( 34.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/268 ( 3.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 RIVMKLEGMNPAASVKDRIGTHMINSAEKAGLINPETTVLVEPTSGNTGIALAMTAAAKG 60 usage_00029.pdb 1 RIVMKLEGMNPAASVKDRIGTHMINSAEKAGLINPETTVLVEPTSGNTGIALAMTAAAKG 60 usage_00030.pdb 1 RIVVKLESMNPAASVKDRIGVSMVEDAEAAGLIHPDKTILVEPTSGNTGIALAMVAAAKG 60 usage_00038.pdb 1 DIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI-KPDTIILEPTSGNTGIALAMVCAARG 59 usage_00046.pdb 1 AIYAKLEHLNPGGSV-DRLGQYLIEEGFKTG-KITSKTTIIEPTAGNTGIALALVAIKHH 58 usage_00047.pdb 1 AIYAKLEHLNPGGSV-DRLGQYLIGEGFKTG-KITSKTTIIEPTAGNTGIALALVAIKHH 58 usage_00048.pdb 1 DIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI-KPDTIILEPTSGNTGIALAMVCAARG 59 I KLE NP SV DR G G T EPT GNTGIALA usage_00028.pdb 61 YRLILTMPETMSLERRAMLKAYGATLELTPGSQGMKGAILRAQQIVDSIPGAYMLQQFRN 120 usage_00029.pdb 61 YRLILTMPETMSLERRAMLKAYGATLELTPGSQGMKGAILRAQQIVDSIPGAYMLQQFRN 120 usage_00030.pdb 61 YRLVLTMPETMSLERRAMLKAYGAQLELTPGSQGMEGAITRAEEIVENTPNAYSLQQFRN 120 usage_00038.pdb 60 YRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFEN 119 usage_00046.pdb 59 LKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFEN 118 usage_00047.pdb 59 LKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFEN 118 usage_00048.pdb 60 YRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFEN 119 PE S E A GA TP G GAI QF N usage_00028.pdb 121 PSNPEIHRLTTAEEIWQDTEGQVDFIVAGVGTGGTITGVAEVIKSRKPSFQVVAVEPFNS 180 usage_00029.pdb 121 PSNPEIHRLTTAEEIWQDTEGQVDFIVAGVGTGGTITGVAEVIKSRKPSFQVVAVEPFNS 180 usage_00030.pdb 121 PANPKIHRETTAEEIWADTDGLVDIVIGGVGTGGTITGIAETIKPRRPQFQAIAVEPSNS 180 usage_00038.pdb 120 PANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 179 usage_00046.pdb 119 PDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEPEGS 178 usage_00047.pdb 119 PDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEPEGS 178 usage_00048.pdb 120 PANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 179 P NP T A E vaG G GGT G A K R P VEP S usage_00028.pdb 181 PVISGGNPGPHKIQGIGAGFIPEVLR-TDLIDEVITVSDEEAFQFGRRLAKEEGLLSGIS 239 usage_00029.pdb 181 PVISGGNPGPHKIQGIGAGFIPEVLR-TDLIDEVITVSDEEAFQFGRRLAKEEGLLSGIS 239 usage_00030.pdb 181 PVLSGGQPGPHKIQGIGAGFIPAIFR-PELIDEVIIVDDTEAFAYARRLARQEGLLSGIS 239 usage_00038.pdb 180 PVLSGGQKGPHPIQGIGAGFVPPVLD-QDLVDEIITVGNEDALNVARRLAREEGLLVGIS 238 usage_00046.pdb 179 -ILNGGEPGPHEIEGIGVEFIPPFFEN-LDIDGFETISDEEGFSYTRKLAKKNGLLVGSS 236 usage_00047.pdb 179 -ILNGGEPGPHEIEGIGVEFIPPFFEN-LDIDGFETISDEEGFSYTRKLAKKNGLLVGSS 236 usage_00048.pdb 180 PVLSGGQKGPHPIQGIGAGFVPPVLD-QDLVDEIITVGNEDALNVARRLAREEGLLVGIS 238 GG GPH I GIG F P D t e R LA GLL G S usage_00028.pdb 240 SGANLCAAIQLAQRPENEGKLIVVI--- 264 usage_00029.pdb 240 SGANLCAAIQLAQRPENEGKLIVVI--- 264 usage_00030.pdb 240 AGAALWAAIQVGKRPENEDKLIVMI--- 264 usage_00038.pdb 239 SGAATVAALQVARRPENAGKLIVVVLPD 266 usage_00046.pdb 237 SGAAFVAALKEAQRLPEG-SQVLTIFPD 263 usage_00047.pdb 237 SGAAFVAALKEAQRLPEG-SQVLTIFPD 263 usage_00048.pdb 239 SGAATVAALQVARRPENAGKLIVVV--- 263 sGA AA a R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################