################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:26 2021 # Report_file: c_1487_177.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00993.pdb # 2: usage_01702.pdb # 3: usage_01703.pdb # 4: usage_01709.pdb # 5: usage_01710.pdb # 6: usage_01721.pdb # 7: usage_02123.pdb # 8: usage_02127.pdb # 9: usage_04025.pdb # 10: usage_04026.pdb # 11: usage_04633.pdb # # Length: 24 # Identity: 0/ 24 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 24 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 24 ( 58.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00993.pdb 1 ------MSKVISWVFGDASVNKS- 17 usage_01702.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_01703.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_01709.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_01710.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_01721.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_02123.pdb 1 -GSASWELENFKTIIS-------- 15 usage_02127.pdb 1 S-----PFLLQYIQEEIPDYR--N 17 usage_04025.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_04026.pdb 1 E-----PAVLKWIRENISEWR--N 17 usage_04633.pdb 1 E-----PAVLKWIRENISEWR--N 17 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################