################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:10:38 2021 # Report_file: c_0290_3.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00019.pdb # 9: usage_00020.pdb # 10: usage_00021.pdb # 11: usage_00022.pdb # 12: usage_00023.pdb # 13: usage_00024.pdb # 14: usage_00030.pdb # 15: usage_00031.pdb # 16: usage_00032.pdb # 17: usage_00033.pdb # 18: usage_00034.pdb # 19: usage_00035.pdb # # Length: 126 # Identity: 15/126 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/126 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/126 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -FEMVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLEEAFK--PLG-I 56 usage_00002.pdb 1 -FEMVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLEEAFK--PLG-I 56 usage_00003.pdb 1 -FEMVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLEEAFK--PLG-I 56 usage_00004.pdb 1 ----VWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFE--PLG-I 53 usage_00010.pdb 1 IFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALS--PLG-I 57 usage_00011.pdb 1 IFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALS--PLG-I 57 usage_00012.pdb 1 IFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALS--PLG-I 57 usage_00019.pdb 1 ----VWTAQTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFE--PLG-I 53 usage_00020.pdb 1 ----VWTAQTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFE--PLG-I 53 usage_00021.pdb 1 ----VWTAQTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFE--PLG-I 53 usage_00022.pdb 1 ----VWTAQTIAPDSEGAIDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFE--PLG-I 53 usage_00023.pdb 1 ----VWTAQTIAPDSEGAIDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFE--PLG-I 53 usage_00024.pdb 1 LYHIVSASQTLLPDSDGAIEGHIREAGLTVHLKKDVPEFFSANIEKSLVDAFT--PIG-I 57 usage_00030.pdb 1 LFEIVSTDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALSKAFD--PLG-I 57 usage_00031.pdb 1 LFEIVSTDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALSKAFD--PLG-I 57 usage_00032.pdb 1 ----VSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFG--PLL-- 52 usage_00033.pdb 1 -------AQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDG 53 usage_00034.pdb 1 ----AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALA--PLG-V 53 usage_00035.pdb 1 IYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALA--PLG-V 57 Q A P N p g usage_00001.pdb 57 T-DYNSLFWIAHPGGPAILDQVEAKIGLKPEKLRATRHVLS------------------- 96 usage_00002.pdb 57 T-DYNSLFWIAHPGGPAILDQVEAKIGLKPEKLRATRHVLS------------------- 96 usage_00003.pdb 57 T-DYNSLFWIAHPGGPAILDQVEAKIGLKPEKLRATRHVLS------------------- 96 usage_00004.pdb 54 S-DYNSIFWIAQPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00010.pdb 58 T-DWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLS------------------- 97 usage_00011.pdb 58 T-DWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK 116 usage_00012.pdb 58 T-DWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLS------------------- 97 usage_00019.pdb 54 S-DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00020.pdb 54 S-DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00021.pdb 54 S-DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00022.pdb 54 S-DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00023.pdb 54 S-DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLS------------------- 93 usage_00024.pdb 58 S-DWNSIFWIAHPGGPAILDQVEAKLGLKKDKLRASRHVMS------------------- 97 usage_00030.pdb 58 S-DYNSIFWIAHPGGRAILDQVEEKVNLKPEKMKATRDVLSNYGNMSSAC---------- 106 usage_00031.pdb 58 S-DYNSIFWIAHPGGRAILDQVEEKVNLKPEKMKATRDVLSN------------------ 98 usage_00032.pdb 53 --GWNDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLS------------------- 91 usage_00033.pdb 54 GGGWNDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLS------------------- 94 usage_00034.pdb 54 R-EWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYG---------------- 96 usage_00035.pdb 58 R-EWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYG---------------- 100 N FW hPG I D L K R V usage_00001.pdb ------ usage_00002.pdb ------ usage_00003.pdb ------ usage_00004.pdb ------ usage_00010.pdb ------ usage_00011.pdb 117 RSMAEG 122 usage_00012.pdb ------ usage_00019.pdb ------ usage_00020.pdb ------ usage_00021.pdb ------ usage_00022.pdb ------ usage_00023.pdb ------ usage_00024.pdb ------ usage_00030.pdb ------ usage_00031.pdb ------ usage_00032.pdb ------ usage_00033.pdb ------ usage_00034.pdb ------ usage_00035.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################