################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:15 2021 # Report_file: c_0069_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00036.pdb # 2: usage_00128.pdb # 3: usage_00130.pdb # 4: usage_00184.pdb # 5: usage_00185.pdb # 6: usage_00186.pdb # 7: usage_00187.pdb # 8: usage_00188.pdb # 9: usage_00189.pdb # # Length: 243 # Identity: 84/243 ( 34.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 207/243 ( 85.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/243 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 60 usage_00128.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGD------DHLAFSCDVA 53 usage_00130.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGD------DHLAFSCDVA 53 usage_00184.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGDLG---GDHLAFSCDVA 56 usage_00185.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGDLG---GDHLAFSCDVA 56 usage_00186.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGDLG---GDHLAFSCDVA 56 usage_00187.pdb 1 --CAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGD------DHLAFSCDVA 51 usage_00188.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGDLG---GDHLAFSCDVA 56 usage_00189.pdb 1 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIAR-NLEGAKAAAGDLG---GDHLAFSCDVA 56 cavfGGSRGIGrAvAqLmARkGYrlAViar NlegAkaaagd dhLAfscDVA usage_00036.pdb 61 KEREVLA-FETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQR-FEINVFGSFLCARE 118 usage_00128.pdb 54 KEHDVQNTFEELEKHLGRVNFLVNAAGIN---L-LVRTKTEDMVSQLHTNLLGSMLTCKA 109 usage_00130.pdb 54 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 112 usage_00184.pdb 57 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 115 usage_00185.pdb 57 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 115 usage_00186.pdb 57 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 115 usage_00187.pdb 52 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 110 usage_00188.pdb 57 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 115 usage_00189.pdb 57 KEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL-LVRTKTEDMVSQLHTNLLGSMLTCKA 115 KEhdVqn FEelekhLGRvnfLVNaAGin l lvrtktEdmvs lhtNllGSmLtcka usage_00036.pdb 119 AVKRSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVN 178 usage_00128.pdb 110 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 166 usage_00130.pdb 113 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 169 usage_00184.pdb 116 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 172 usage_00185.pdb 116 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 172 usage_00186.pdb 116 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 172 usage_00187.pdb 111 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 167 usage_00188.pdb 116 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 172 usage_00189.pdb 116 AMRTMIQQ--QGGSIVNVGSIVGLKGN-SGQSVYSASKGGLVGFSRALAKEVARKKIRVN 172 Amrtmiqq qGGSIVNVgSivglkGn sgqsvYsAsKGglvgFsraLAKEVArkkIRVN usage_00036.pdb 179 AVRPGIIE-TDIHASGGLPNRARDVAPQVP-QRAGTAREVAEAIVWLLGDQASYTTGALL 236 usage_00128.pdb 167 VVAPGFVH-TD---------KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 214 usage_00130.pdb 170 VVAPGFVH-T-----------EEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 215 usage_00184.pdb 173 VVAPGFVHE--------------HLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 216 usage_00185.pdb 173 VVAPGFVH-T---K-DL---KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 222 usage_00186.pdb 173 VVAPGFVH-TDMTK-DL---KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 225 usage_00187.pdb 168 VVAPGFVH-T----------KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 214 usage_00188.pdb 173 VVAPGFVH-TDMTK-DL---KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 225 usage_00189.pdb 173 VVAPGFVH-T----------KEEHLKKNIPLGRFGETIEVAHAVVFLLE--SPYITGHVL 219 vVaPGfvh hlkkniP gRfGetiEVAhAvVfLLe spYiTGhvL usage_00036.pdb 237 DVT 239 usage_00128.pdb 215 VVD 217 usage_00130.pdb 216 VVD 218 usage_00184.pdb 217 VVD 219 usage_00185.pdb 223 VVD 225 usage_00186.pdb 226 VVD 228 usage_00187.pdb 215 VVD 217 usage_00188.pdb 226 VVD 228 usage_00189.pdb 220 VVD 222 vVd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################