################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:05 2021 # Report_file: c_0175_10.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00352.pdb # 2: usage_00353.pdb # 3: usage_00354.pdb # 4: usage_00355.pdb # 5: usage_00366.pdb # 6: usage_00516.pdb # 7: usage_00517.pdb # 8: usage_00619.pdb # 9: usage_00644.pdb # 10: usage_00645.pdb # 11: usage_00646.pdb # 12: usage_00647.pdb # # Length: 160 # Identity: 45/160 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/160 ( 28.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/160 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00352.pdb 1 KVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 60 usage_00353.pdb 1 ------------AGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 48 usage_00354.pdb 1 KVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 60 usage_00355.pdb 1 ---------GVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 51 usage_00366.pdb 1 ---------GVIGAITPCTNPSETIICNTIGMLAGGNTVVFNPHPAAIKTSNFAVQLINE 51 usage_00516.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 usage_00517.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 usage_00619.pdb 1 ---------GVIGAITPCTNPSETIICNTIGMLAGGNTVVFNPHPAAIKTSNFAVQLINE 51 usage_00644.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 usage_00645.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 usage_00646.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 usage_00647.pdb 1 RVWEIAQPVGIVAGIIPSTNPTSTVIFKALIAVKARNAIVFSPHPSAAKCTAEAARIMQE 60 P TNP T I N VF PHP A K E usage_00352.pdb 61 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPG 120 usage_00353.pdb 49 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPG 108 usage_00354.pdb 61 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPG 120 usage_00355.pdb 52 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPG 111 usage_00366.pdb 52 ASLSAGGPVNIACSVRKPTLDSSKIMMSHQDIPLIAATGGPGVVTAVLQSGKRGIGAGAG 111 usage_00516.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 usage_00517.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 usage_00619.pdb 52 ASLSAGGPVNIACSVRKPTLDSSKIMMSHQDIPLIAATGGPGVVTAVLQSGKRGIGAGAG 111 usage_00644.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 usage_00645.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 usage_00646.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 usage_00647.pdb 61 AAERAGAPKGLISCITQPTMAATNELMKHKLTDVILATGGPGLVKAAYSSGKPAYGVGPG 120 A AG P PT M H I ATGG V A SG G G G usage_00352.pdb 121 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVE 160 usage_00353.pdb 109 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVE 148 usage_00354.pdb 121 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVE 160 usage_00355.pdb 112 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVE 151 usage_00366.pdb 112 NPPVLVDETADIRKAAEDIINGCTFDNNLPAIAEKEVVAI 151 usage_00516.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 usage_00517.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 usage_00619.pdb 112 NPPVLVDETADIRKAAEDIINGCTFDNNLPCIAEKEVVAI 151 usage_00644.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 usage_00645.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 usage_00646.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 usage_00647.pdb 121 NVPVYIHESANIAKAVQLIIQSKTFDYGTIASEQALLVD- 159 N P A I A I TFD V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################