################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:35 2021 # Report_file: c_1126_65.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00049.pdb # 2: usage_00233.pdb # 3: usage_00234.pdb # # Length: 145 # Identity: 20/145 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/145 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/145 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -----SSVRNQFWFSGAMMIITGYIGQFYE--VSNL---TAFLVWGAISSAFFFHILWVM 50 usage_00233.pdb 1 TAARTWNLSIKLVVASVLMLALGYVGEVNTEPG---PRTLWGALSSIPFFYILYVLWVEL 57 usage_00234.pdb 1 -AARTWNLSIKLVVASVLMLALGYVGEVNTEPG---PRTLWGALSSIPFFYILYVLWVEL 56 wnlsiklvvasvlMlalGYvGevnt g lwgalssipffyilyvlwvel usage_00049.pdb 51 KKVINEGKEGISPAGQKILSNIWILFLISWTLYPGAYLMPYLTGFLYSEDGVMARQLVYT 110 usage_00233.pdb 58 GQAIRE--AKFGPRVLELLGATRLVLLMSWGFYPIAYALGTWLP--GGAAQEVAIQIGYS 113 usage_00234.pdb 57 GQAIRE--AKFGPRVLELLGATRLVLLMSWGFYPIAYALGTWLP--GGAAQEVAIQIGYS 112 gqaIrE akfgPrvlelLgatrlvlLmSWgfYPiAYalgtwlp ggaaqevAiQigYs usage_00049.pdb 111 IADVS-------------------- 115 usage_00233.pdb 114 LADLIAPIYGLLVFAIARAKSLEEG 138 usage_00234.pdb 113 LADLI-------------------- 117 lADli #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################