################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:08 2021 # Report_file: c_0160_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00010.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00026.pdb # 9: usage_00027.pdb # 10: usage_00028.pdb # 11: usage_00029.pdb # 12: usage_00030.pdb # # Length: 156 # Identity: 93/156 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 102/156 ( 65.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/156 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWN 60 usage_00002.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWN 60 usage_00003.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWN 60 usage_00004.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWN 60 usage_00010.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWN 60 usage_00013.pdb 1 RGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWN 60 usage_00014.pdb 1 RGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWN 60 usage_00026.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWN 60 usage_00027.pdb 1 RGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWN 60 usage_00028.pdb 1 RGIWHNDNKTFLVWVNEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKDYEFMWN 60 usage_00029.pdb 1 RGIWHNNDKTFLVWVNEEDHLRVISMQKGGNMKEVFRRFCVGLKKIEDIFVKAGRGFMWN 60 usage_00030.pdb 1 RGIWHNDNKTFLVWVNEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKDYEFMWN 60 RGIWHNdnK FLVW NEEDHLRVISM KGGNMKEVF RFC GL IE Fk FMWN usage_00001.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFGEVLKRLRLQKRGTGGVDTAAVGGVF 120 usage_00002.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFGEVLKRLRLQKRGTGGVDTAAVGGVF 120 usage_00003.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFGEVLKRLRLQKRGTGGVDTAAVGGVF 120 usage_00004.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFGEVLKRLRLQKRGTGGVDTAAVGGVF 120 usage_00010.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPHLGKHEKFSEVLKRLRLQKRG--------VGGVF 112 usage_00013.pdb 61 QHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRG---------TSVF 111 usage_00014.pdb 61 QHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRG---------TSVF 111 usage_00026.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPHLGKHEKFPEVLKRLRLQKRG---------GGVF 111 usage_00027.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPHLGKHEKFPEVLKRLRLQKRG---------GGVF 111 usage_00028.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKRV---------GGVF 111 usage_00029.pdb 61 EHLGYVLTCPSNLGTGLRGGVHVKIPHLCKHEKFSEVLKRTRLQKRGTGGVDTAAVGSIY 120 usage_00030.pdb 61 PHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKRGTGGVDTAAVGGVF 120 HLGY LTCPSNLGTGLR GVH Kl L KH KF E L RlRLQKRg vf usage_00001.pdb 121 DVSNADRLGFSEVELVQMVVDGVKLLIEMEKRLEKG 156 usage_00002.pdb 121 DVSNADRLGFSEVELVQMVVDGVKLLIEMEKRLEKG 156 usage_00003.pdb 121 DVSNADRLGFSEVELVQMVVDGVKLLIEMEKRLEKG 156 usage_00004.pdb 121 DVSNADRLGFSEVELVQMVVDGVKLLIEMEKRLEKG 156 usage_00010.pdb 113 DVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQG 148 usage_00013.pdb 112 DVSNADRLGSSEVEQVQLVVDGVKLMVEMEKKLE-- 145 usage_00014.pdb 112 DVSNADRLGSSEVEQVQLVVDGVKLMVEMEKKLE-- 145 usage_00026.pdb 112 DVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQG 147 usage_00027.pdb 112 DVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQG 147 usage_00028.pdb 112 DVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQG 147 usage_00029.pdb 121 DISNADRLGFSEVEQVQMVVD--------------- 141 usage_00030.pdb 121 DVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQ- 155 DvSNADRLG SEVE VQ VVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################