################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:53 2021 # Report_file: c_1207_87.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00418.pdb # 2: usage_00419.pdb # 3: usage_00474.pdb # 4: usage_00537.pdb # 5: usage_00584.pdb # 6: usage_00644.pdb # 7: usage_00645.pdb # 8: usage_00659.pdb # 9: usage_00923.pdb # 10: usage_01131.pdb # 11: usage_01368.pdb # # Length: 32 # Identity: 1/ 32 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 32 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 32 ( 40.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00418.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 usage_00419.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 usage_00474.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 usage_00537.pdb 1 ---GELLVSLCYQSTT-N---TLTVVVLKARH 25 usage_00584.pdb 1 ---------SAVSFDNQQISYGTTVLVVDINN 23 usage_00644.pdb 1 EKLGDICFSLAYVPTA-G---KLTVVILAAKN 28 usage_00645.pdb 1 EKLGDICFSLAYVPTA-G---KLTVVILAAKN 28 usage_00659.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 usage_00923.pdb 1 ---GELLLSLCYNPSA-N---SIIVNIIKARN 25 usage_01131.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 usage_01368.pdb 1 ---GDICFSLRYVPTA-G---KLTVVILEAKN 25 l y tV a n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################