################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:58 2021 # Report_file: c_1370_223.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00494.pdb # 2: usage_00511.pdb # 3: usage_00512.pdb # 4: usage_00869.pdb # # Length: 66 # Identity: 2/ 66 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 66 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 66 ( 54.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00494.pdb 1 -EEQKQEIREAFDLFDAD------GTGTI--DVKELKVARALGFE----PKKEEIKKISE 47 usage_00511.pdb 1 LEEQKQEIYEAFSLFD-N------NDGFL--DYHELKVAKALGFE----LPKREILDLID 47 usage_00512.pdb 1 LEEQKQEIYEAFSLFD-N------NDGFL--DYHELKVAKALGFE----LPKREILDLID 47 usage_00869.pdb 1 -------KETQIKYIDD-HISEFNE----HDLLLHLISDN-----PSEILDFGRAKVMYM 43 i eaf lfD d eLkva l k ei usage_00494.pdb 48 I----D 49 usage_00511.pdb 48 -E---- 48 usage_00512.pdb 48 -E---- 48 usage_00869.pdb 44 -DIAKE 48 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################