################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:45 2021 # Report_file: c_0777_125.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00601.pdb # 2: usage_00602.pdb # 3: usage_00988.pdb # 4: usage_01095.pdb # 5: usage_01312.pdb # 6: usage_01474.pdb # # Length: 75 # Identity: 20/ 75 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 75 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 75 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00601.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITVVSVFVNPLQFGPNEDFDAYPRQIDKDLE 60 usage_00602.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITVVSVFVNPLQFGPNED-FAYPRQIDKDLE 59 usage_00988.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLE 60 usage_01095.pdb 1 --RVALVPTMGNLHDGHMKLVDEAKARADVVIVSIFVNPMQFDRPDDLVRYPRTLQEDCE 58 usage_01312.pdb 1 --RIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCE 58 usage_01474.pdb 1 ----GF-VPTGYLHRGHLALVERARRENPFVVASVFVNPLQFGPGEDYHRYPRDLERDRA 55 ptmG LH GH V e d vs FVNPlQF D YPR D e usage_00601.pdb 61 LVSEVGADIVFHPA- 74 usage_00602.pdb 60 LVSEVGADIVFHPA- 73 usage_00988.pdb 61 LVSEVGADIVFHPA- 74 usage_01095.pdb 59 KLNKRKVDYVFAPAV 73 usage_01312.pdb 59 KLTRHGADLVFAP-- 71 usage_01474.pdb 56 LLQEAGVDLLFAPG- 69 g D vF P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################