################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:06 2021 # Report_file: c_1483_177.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00028.pdb # 2: usage_00601.pdb # 3: usage_00674.pdb # 4: usage_01312.pdb # 5: usage_01406.pdb # 6: usage_01518.pdb # 7: usage_01788.pdb # 8: usage_02336.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 59 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 59 ( 81.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ---GY-------------------------DKYTTWKKIWT-SNGKTEPSPKAFMAD-- 28 usage_00601.pdb 1 ---SKEILEELQL----------N--TKFTEEELSSWYQSF-LKE------------CP 31 usage_00674.pdb 1 ------VVEELTR----------K--TYFTEKEVQQWYKGF-IKD-------------- 26 usage_01312.pdb 1 VAV---DDLVRAS----------S--SISTLVVMMDKDIEA-D---------------- 27 usage_01406.pdb 1 ------NSKSGALSKEILEELQLN--TKFTEEELSSWYQSFLKEC-------------- 37 usage_01518.pdb 1 ------VVEELTR----------K--TYFTEKEVQQWYKGF-IKD-------------- 26 usage_01788.pdb 1 ------T-TED-I----------L--N---KNYFSSWLIGF-FE--------------- 20 usage_02336.pdb 1 ------------------------LSDFVPKETQQLWHSMI------------------ 17 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################