################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:15 2021 # Report_file: c_0447_3.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00045.pdb # 7: usage_00046.pdb # 8: usage_00057.pdb # 9: usage_00058.pdb # 10: usage_00075.pdb # 11: usage_00076.pdb # 12: usage_00077.pdb # 13: usage_00079.pdb # 14: usage_00139.pdb # 15: usage_00140.pdb # 16: usage_00141.pdb # 17: usage_00153.pdb # 18: usage_00214.pdb # 19: usage_00215.pdb # 20: usage_00216.pdb # # Length: 115 # Identity: 36/115 ( 31.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/115 ( 32.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/115 ( 37.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 KICQFKLVLLGESPVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00002.pdb 1 KICQFKLVLLGESPVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00003.pdb 1 KICQFKLVLLGESRVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00004.pdb 1 KICQFKLVLLGESKVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00005.pdb 1 KICQFKLVLLGESLVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00045.pdb 1 -----KLVFLGEQSVGKTSLITRFMYDS-FDN--------------D-FLSKTMYLEDRT 39 usage_00046.pdb 1 ----FKLVFLGEQSVGKTSLITRFMYDS-FDN---------------TFLSKTMYLEDRT 40 usage_00057.pdb 1 -ICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEYQ---ESTIGA---A-FLTQTVCLDDTT 51 usage_00058.pdb 1 -ICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEYQ---ESTIGA---A-FLTQTVCLDDTT 51 usage_00075.pdb 1 KICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEYQ---EST---IGAA-FLTQSVCL--TT 50 usage_00076.pdb 1 -ICQFKLVLLGESAVGKSSLVLRFVK-GQF---Q---ESTIGA---A-FLTQTVCLDDTT 48 usage_00077.pdb 1 KICQFKLVLLGESAVGKSSLVLRFVK-G------QFHESTIGA---A-FLTQTVCLDDTT 49 usage_00079.pdb 1 -ICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEYQ---ESTIGA---A-FLTQTVCLDDTT 51 usage_00139.pdb 1 SICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEYQ---ESTIQA---A-FLTQTVCLDDTT 52 usage_00140.pdb 1 KICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00141.pdb 1 KICQFKLVLLGESPVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00153.pdb 1 KICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 usage_00214.pdb 1 -ICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 51 usage_00215.pdb 1 -----KLVLLGESAVGKSSLVLRFVKGQ-F---Q---ESTIGA---A-FLTQTVC--DTT 42 usage_00216.pdb 1 KICQFKLVLLGESAVGKSSLVLRFVKGQ-FHEFQ---ESTIGA---A-FLTQTVCLDDTT 52 KLV LGE VGK SL RF FL t T usage_00001.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00002.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00003.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00004.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00005.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00045.pdb 40 VRLQLWDTA-------SLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTER 87 usage_00046.pdb 41 VRLQLWDTA-GQER-FSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRT-- 91 usage_00057.pdb 52 VKFEIWDTAGL-ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR-- 103 usage_00058.pdb 52 VKFEIWDTAGL-ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ--- 102 usage_00075.pdb 51 VKFEIWDTA-GQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR-- 102 usage_00076.pdb 49 VKFEIWDTAGQ-ERYHSLAP-YYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 99 usage_00077.pdb 50 VKFEIWDTAGQ-ERYHSLAP-YYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 100 usage_00079.pdb 52 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR-- 103 usage_00139.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR-- 104 usage_00140.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00141.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 usage_00153.pdb 53 VKFEIWDTAGL-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQ- 105 usage_00214.pdb 52 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 103 usage_00215.pdb 43 V--EIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL---- 90 usage_00216.pdb 53 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR-- 104 V WDTA SL P Y R A VVYDITN F W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################