################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:29:26 2021 # Report_file: c_0152_1.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00007.pdb # 2: usage_00020.pdb # 3: usage_00033.pdb # 4: usage_00034.pdb # 5: usage_00040.pdb # 6: usage_00045.pdb # 7: usage_00053.pdb # 8: usage_00054.pdb # 9: usage_00072.pdb # 10: usage_00111.pdb # 11: usage_00135.pdb # 12: usage_00136.pdb # 13: usage_00143.pdb # 14: usage_00156.pdb # 15: usage_00160.pdb # 16: usage_00165.pdb # 17: usage_00166.pdb # 18: usage_00175.pdb # 19: usage_00176.pdb # 20: usage_00177.pdb # 21: usage_00179.pdb # 22: usage_00181.pdb # 23: usage_00184.pdb # 24: usage_00201.pdb # 25: usage_00206.pdb # 26: usage_00207.pdb # 27: usage_00213.pdb # 28: usage_00227.pdb # 29: usage_00232.pdb # 30: usage_00236.pdb # 31: usage_00237.pdb # 32: usage_00238.pdb # 33: usage_00239.pdb # # Length: 109 # Identity: 46/109 ( 42.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/109 ( 62.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/109 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTSIHWFQQRINGSPRLLIEYASESISGIPS 59 usage_00020.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYTSQSMSGIPS 59 usage_00033.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00034.pdb 1 --VMTQSPDTLSVSPGETVTLSCRASQNINKNLAWYQYKPGQSPRLVIFETYSKIAAFPA 58 usage_00040.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00045.pdb 1 -LVLTQSPATLSVTPGDSVSFSCRASQSISNNLHWYQQRTHESPRLLIKYASQSISGIPS 59 usage_00053.pdb 1 DILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 60 usage_00054.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00072.pdb 1 -IELTQSPATLSVTPGNSVSISCRASQSIGNRLFWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00111.pdb 1 -IVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00135.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00136.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00143.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00156.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPS 59 usage_00160.pdb 1 -IVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 59 usage_00165.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00166.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00175.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00176.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00177.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00179.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00181.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00184.pdb 1 -ILLTQSPAILSVSPGERVSLSCRASQSIGTSIHWYQQRTNGSPRPLIKYASESISGIPS 59 usage_00201.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00206.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYTSQSMSGIPS 59 usage_00207.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYTSQSMSGIPS 59 usage_00213.pdb 1 -IVLTQSPAILSVSPGERVSFSCRASQNIGTSIHWYQQRTNESPRLIIKYASESISGIPS 59 usage_00227.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00232.pdb 1 -ILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00236.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00237.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 usage_00238.pdb 1 --LLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 58 usage_00239.pdb 1 -ILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS 59 TQSP LSV PG Vs SCRASQ I WyQq SPRl I y s s sgiPs usage_00007.pdb 60 RFSGSGSGTDFTLTINSVESEDIADYYCQQSNVWPFTFGSGTKLEI--- 105 usage_00020.pdb 60 RFSGSGSGTDFTLSINSVETEDFGVYFCQQSGSWPRTFGGGTKLDI--- 105 usage_00033.pdb 61 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 106 usage_00034.pdb 59 RFVASGSGTEFTLTINNMQSEDVAVYYCQQYEEWPRTFGQGTKVDIKRT 107 usage_00040.pdb 60 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRA 108 usage_00045.pdb 60 RFSGSGSGTDFTLSISSVETEDFGMYFCQQSNRWPLTFGAGTKLEL--- 105 usage_00053.pdb 61 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 109 usage_00054.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00072.pdb 60 RFSGSGSGTDFTLSINSVETEDLAVYFCQQVSEWPFTFGGGTKLEI--- 105 usage_00111.pdb 60 RFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPLTFGAGTKLELKRT 108 usage_00135.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEI--- 105 usage_00136.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00143.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00156.pdb 60 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEI--- 105 usage_00160.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 105 usage_00165.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00166.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00175.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00176.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00177.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00179.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00181.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00184.pdb 60 RFSGSGSGTDFTLNINSVESEDIADYFCQQTDSWPTTFGAGTKLEL--- 105 usage_00201.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00206.pdb 60 RFSGSGSGTDFTLSINSVETEDFGVYFCQQSGSWPRTFGGGTKLDI--- 105 usage_00207.pdb 60 RFSGSGSGTDFTLSINSVETEDFGVYFCQQSGSWPRTFGGGTKLDI--- 105 usage_00213.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQSNTWPYTFGGGTKLEL--- 105 usage_00227.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00232.pdb 60 RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 108 usage_00236.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00237.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 usage_00238.pdb 59 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 107 usage_00239.pdb 60 RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRT 108 RFsgSGSGtdFTL Insve ED Y CQq wP TFG GTKl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################