################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:45:28 2021 # Report_file: c_0153_9.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00008.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00067.pdb # 5: usage_00069.pdb # 6: usage_00095.pdb # 7: usage_00096.pdb # 8: usage_00097.pdb # 9: usage_00115.pdb # 10: usage_00122.pdb # 11: usage_00123.pdb # 12: usage_00146.pdb # 13: usage_00209.pdb # 14: usage_00226.pdb # 15: usage_00227.pdb # 16: usage_00267.pdb # 17: usage_00271.pdb # # Length: 152 # Identity: 94/152 ( 61.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/152 ( 66.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/152 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 SRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDHKTLNNDIMLIKLSSPVKLNARVATV 60 usage_00035.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATV 59 usage_00036.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATV 59 usage_00067.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATV 59 usage_00069.pdb 1 SRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATV 60 usage_00095.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVK----VATV 55 usage_00096.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVK----VATI 55 usage_00097.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVK----VATV 55 usage_00115.pdb 1 --IQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATV 58 usage_00122.pdb 1 --IQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATV 58 usage_00123.pdb 1 SRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATV 60 usage_00146.pdb 1 -RIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATV 59 usage_00209.pdb 1 TRIQVRLGEHNIKVLEGNEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTI 60 usage_00226.pdb 1 SRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATV 60 usage_00227.pdb 1 --IQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATV 58 usage_00267.pdb 1 TRIQVRLGEHNIKVLEGNEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTI 60 usage_00271.pdb 1 TRIQVRLGEHNIKVLEGNEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTI 60 IQVRLGEHNI VLEGNEQF NAAKII HP r T N IMLIKLSSP V T usage_00008.pdb 61 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 120 usage_00035.pdb 60 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 119 usage_00036.pdb 60 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 119 usage_00067.pdb 60 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 119 usage_00069.pdb 61 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 120 usage_00095.pdb 56 ALPSSCAPAGTQCLISGWGHTL----NHPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 111 usage_00096.pdb 56 ALPSSCAPAGTQCLISGWGHTL----NHPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 111 usage_00097.pdb 56 ALPSSCAPAGTQCLISGWGHTLSSGVNHPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 115 usage_00115.pdb 59 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 118 usage_00122.pdb 59 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 118 usage_00123.pdb 61 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASSSFIITDNMVCV 120 usage_00146.pdb 60 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 119 usage_00209.pdb 61 SLPTAPPAAGTECLISGWGNTLSFGADYPDELKCLDAPVLTQAECKASYPGKITNSMFCV 120 usage_00226.pdb 61 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 120 usage_00227.pdb 59 ALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCV 118 usage_00267.pdb 61 SLPTAPPAAGTECLISGWGNTLSFGADYPDELKCLDAPVLTQAECKASYPGKITNSMFCV 120 usage_00271.pdb 61 SLPTAPPAAGTECLISGWGNTLSFGADYPDELKCLDAPVLTQAECKASYPGKITNSMFCV 120 LP AGT CLISGWG TL PD L CLDAP L QA C ASypgkIT M CV usage_00008.pdb 121 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 152 usage_00035.pdb 120 GFLEGGKGSCQGDSGGPVVCNGELQGIVSWGY 151 usage_00036.pdb 120 GFLEGGKGSCQGDSGGPVVCNGELQGIVSWGY 151 usage_00067.pdb 120 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 151 usage_00069.pdb 121 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 152 usage_00095.pdb 112 GFLEGGKDSCQGDSGGPVVCNGELQGIVS--- 140 usage_00096.pdb 112 GFLEGGKDSCQGDSGGPVVCNGELQGIVS--- 140 usage_00097.pdb 116 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 147 usage_00115.pdb 119 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 150 usage_00122.pdb 119 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 150 usage_00123.pdb 121 GFLEGGKDACQGDSGGPVVCNGELQGIVSWGY 152 usage_00146.pdb 120 GFLEGGKDSCQGDAGGPVVCNGELQGIVSWGY 151 usage_00209.pdb 121 GFLEGGKDSCQRDAGGPVVCNGQLQGVVSWGH 152 usage_00226.pdb 121 GFLEGGKDSCQGDSGGPVVCNGELQGIVEWGY 152 usage_00227.pdb 119 GFLEGGKDSCQGDSGGPVVCNGELQGIVSWGY 150 usage_00267.pdb 121 GFLEGGKDSCQRDAGGPVVCNGQLQGVVSWGH 152 usage_00271.pdb 121 GFLEGGKDSCQRDAGGPVVCNGQLQGVVSWGH 152 GFLEGGK sCQ D GGPVVCNG LQG Vs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################