################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:25 2021 # Report_file: c_1396_51.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00874.pdb # 2: usage_00875.pdb # 3: usage_00876.pdb # 4: usage_00877.pdb # 5: usage_00878.pdb # 6: usage_00879.pdb # 7: usage_00880.pdb # 8: usage_00881.pdb # 9: usage_00882.pdb # 10: usage_00883.pdb # # Length: 68 # Identity: 51/ 68 ( 75.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 68 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 68 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00874.pdb 1 -PLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDYVAVDDL 59 usage_00875.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDY------ 54 usage_00876.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDYVAVDDL 60 usage_00877.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDYVAVDDL 60 usage_00878.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMAYVAKVDD 60 usage_00879.pdb 1 -PLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMAYVAKVDD 59 usage_00880.pdb 1 -PLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMNYVAKVDD 59 usage_00881.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMNYVAKVDD 60 usage_00882.pdb 1 --LRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMAYVAKVDD 58 usage_00883.pdb 1 KPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMAYVAKVDD 60 LRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEM Y usage_00874.pdb 60 VR-A---- 62 usage_00875.pdb -------- usage_00876.pdb 61 VR-A---- 63 usage_00877.pdb 61 VR-AS--- 64 usage_00878.pdb 61 LVRASS-- 66 usage_00879.pdb 60 LVRASS-- 65 usage_00880.pdb 60 LVRASSSI 67 usage_00881.pdb 61 LVRAS--- 65 usage_00882.pdb 59 LVRAS--- 63 usage_00883.pdb 61 LVRAS--- 65 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################