################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:19:08 2021 # Report_file: c_0029_1.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # 14: usage_00014.pdb # 15: usage_00015.pdb # 16: usage_00016.pdb # 17: usage_00017.pdb # 18: usage_00018.pdb # 19: usage_00019.pdb # 20: usage_00020.pdb # # Length: 207 # Identity: 113/207 ( 54.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/207 ( 72.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/207 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDF 60 usage_00002.pdb 1 NWHCDSQWLGDRVITTSTRTWALPTYNNHLYKQISNSTSGGSSNDNAYFGYSTPWGYFDF 60 usage_00003.pdb 1 DWHCDSTWSEGHVTTTSTRTWVLPTYNNHLYKRLGES-----LQSNTYNGFSTPWGYFDF 55 usage_00004.pdb 1 NWHCDSTWMGDRVITTSTRTWALPTYNNHLYKQISSQ--SGASNDNHYFGYSTPWGYFDF 58 usage_00005.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00006.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00007.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00008.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00009.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00010.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00011.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00012.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00013.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00014.pdb 1 -----------RVITTSTRTWALPTYNNHLYKQISSA-STGASNDNHYFGYSTPWGYFDF 48 usage_00015.pdb 1 NWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGSTNDNTYFGYSTPWGYFDF 60 usage_00016.pdb 1 NWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDF 60 usage_00017.pdb 1 NWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDF 60 usage_00018.pdb 1 NWHCDSTWMGDRVITTSTRTWALPTYNNHLYKQISSQ--SGASNDNHYFGYSTPWGYFDF 58 usage_00019.pdb 1 DWHCDSTWMGDRVVTKSTRTWVLPSYNNHQYREIKSGS-VDGSNANAYFGYSTPWGYFDF 59 usage_00020.pdb 1 ----DSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDF 56 rV TtSTRTW LPtYNNHlYk i n N YfGySTPWGYFDF usage_00001.pdb 61 NRFHCHFSPRDWQRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFT 120 usage_00002.pdb 61 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTDNNGVKTIANNLTSTVQVFT 120 usage_00003.pdb 56 NRFHCHFSPRDWQRLINNNWGMRPKAMRVKIFNIQVKEVTTSNGETTVANNLTSTVQIFA 115 usage_00004.pdb 59 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFT 118 usage_00005.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00006.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00007.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00008.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00009.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00010.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00011.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00012.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00013.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00014.pdb 49 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFS 108 usage_00015.pdb 61 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNEGTKTIANNLTSTVQVFT 120 usage_00016.pdb 61 NRFHCHFSPRDWQRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFT 120 usage_00017.pdb 61 NRFHCHFSPRDWQRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFT 120 usage_00018.pdb 59 NRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFT 118 usage_00019.pdb 60 NRFHSHWSPRDWQRLINNYWGFRPRSLRVKIFNIQVKEVTVQDSTTTIANNLTSTVQVFT 119 usage_00020.pdb 57 NRFHCHFSPRDWQRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFT 116 NRFHcHfSPRDWQRLINNnWGfRPk l K FNIQVKEVT g TiANNLTST QvF usage_00001.pdb 121 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 177 usage_00002.pdb 121 DSDYQLPYVLGSAHEGCLPPFPADVFMIPQYGYLTLND---GSQAVGRSSFYCLEYFPSQ 177 usage_00003.pdb 116 DSSYELPYVMDAGQEGSLPPFPNDVFMVPQYGYCGLVTGNTSQQQTDRNAFYCLEYFPSQ 175 usage_00004.pdb 119 DSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 175 usage_00005.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00006.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00007.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00008.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00009.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00010.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00011.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00012.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00013.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00014.pdb 109 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 165 usage_00015.pdb 121 DSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNN---GSQALGRSSFYCLEYFPSQ 177 usage_00016.pdb 121 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 177 usage_00017.pdb 121 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 177 usage_00018.pdb 119 DSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 175 usage_00019.pdb 120 DDDYQLPYVVGNGTEGCLPAFPPQVFTLPQYGYATLNRDN-TENPTERSSFFCLEYFPSK 178 usage_00020.pdb 117 DSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNN---GSQAVGRSSFYCLEYFPSQ 173 Ds YqLPYV g GcLPpFP dVFm PQYGY tLn q RssFyCLEYFPSq usage_00001.pdb 178 MLRTGNNFQFTYTFEDVPFHSSYAHSQ 204 usage_00002.pdb 178 MLRTGNNFQFSYEFENVPFHSSYAHSQ 204 usage_00003.pdb 176 MLRTGNNFEITYSFEKVPFHSMYAHSQ 202 usage_00004.pdb 176 MLRTGNNFTFSYTFEDVPFHSSYAHSQ 202 usage_00005.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00006.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00007.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00008.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00009.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00010.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00011.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00012.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00013.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00014.pdb 166 MLRTGNNFTFSYTFEEVPFHSSYAHSQ 192 usage_00015.pdb 178 MLRTGNNFQFSYTFEDVPFHSSYAHSQ 204 usage_00016.pdb 178 MLRTGNNFQFTYTFEDVPFHSSYAHSQ 204 usage_00017.pdb 178 MLRTGNNFQFTYTFEDVPFHSSYAHSQ 204 usage_00018.pdb 176 MLRTGNNFTFSYTFEDVPFHSSYAHSQ 202 usage_00019.pdb 179 MLRTGNNFEFTYNFEEVPFHSSFAPSQ 205 usage_00020.pdb 174 MLRTGNNFQFTYTFEDVPFHSSYAHSQ 200 MLRTGNNF f Y FE VPFHSsyAhSQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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