################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:31 2021 # Report_file: c_0664_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00057.pdb # 2: usage_00176.pdb # 3: usage_00177.pdb # 4: usage_00318.pdb # 5: usage_00319.pdb # 6: usage_00475.pdb # 7: usage_00573.pdb # 8: usage_00574.pdb # 9: usage_00702.pdb # # Length: 96 # Identity: 23/ 96 ( 24.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 96 ( 42.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 96 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 GDVTHIAG---T-QNYTMNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGVLTQT---TRR 53 usage_00176.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTN--- 53 usage_00177.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNT---- 52 usage_00318.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVP 56 usage_00319.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVP 56 usage_00475.pdb 1 GMTSNPTRDYWD--GHLLHLVHPNGATYDPTEDVPAPFGTQDFRGILYGVLTQN---PRA 55 usage_00573.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNT-- 54 usage_00574.pdb 1 -QQVQD-----EGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNT---- 50 usage_00702.pdb 1 -QQVQDEH---RGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNT-- 54 m Ng DPTEdvPAPlGTpDF G iyGV Q usage_00057.pdb 54 --D-GST---RGHKATVSTGSVHFTPKLGSVQFS-- 81 usage_00176.pdb 54 ----LPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 83 usage_00177.pdb 53 ----LPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 82 usage_00318.pdb 57 GEGNLPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 90 usage_00319.pdb 57 GEGNLPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 90 usage_00475.pdb 56 --S-GDE-AANSQGVYISSTSEKFTPKLGTIGLH-- 85 usage_00573.pdb 55 ---NLPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 85 usage_00574.pdb 51 ----LPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 80 usage_00702.pdb 55 ---NLPAN--RAHEAVIATYSPKFTPKLGNIQFSTW 85 r h a i t S kFTPKLG iqfs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################