################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:55:54 2021 # Report_file: c_0795_1.html ################################################################################################ #==================================== # Aligned_structures: 56 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # 14: usage_00014.pdb # 15: usage_00015.pdb # 16: usage_00016.pdb # 17: usage_00017.pdb # 18: usage_00018.pdb # 19: usage_00019.pdb # 20: usage_00020.pdb # 21: usage_00021.pdb # 22: usage_00022.pdb # 23: usage_00023.pdb # 24: usage_00024.pdb # 25: usage_00025.pdb # 26: usage_00026.pdb # 27: usage_00027.pdb # 28: usage_00028.pdb # 29: usage_00030.pdb # 30: usage_00031.pdb # 31: usage_00032.pdb # 32: usage_00033.pdb # 33: usage_00034.pdb # 34: usage_00035.pdb # 35: usage_00036.pdb # 36: usage_00037.pdb # 37: usage_00038.pdb # 38: usage_00039.pdb # 39: usage_00040.pdb # 40: usage_00041.pdb # 41: usage_00042.pdb # 42: usage_00043.pdb # 43: usage_00044.pdb # 44: usage_00045.pdb # 45: usage_00046.pdb # 46: usage_00047.pdb # 47: usage_00048.pdb # 48: usage_00049.pdb # 49: usage_00050.pdb # 50: usage_00051.pdb # 51: usage_00052.pdb # 52: usage_00053.pdb # 53: usage_00054.pdb # 54: usage_00055.pdb # 55: usage_00056.pdb # 56: usage_00057.pdb # # Length: 125 # Identity: 12/125 ( 9.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/125 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/125 ( 56.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -GYMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 usage_00002.pdb 1 -GYMLGSAMSRPMMHFGNDWEDRYYRENMN-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 56 usage_00003.pdb 1 GGYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 57 usage_00004.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 usage_00005.pdb 1 --YMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 55 usage_00006.pdb 1 --YMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 55 usage_00007.pdb 1 --YMLGSAMSRPLIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 55 usage_00008.pdb 1 --YMLGSAMSRPLIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 55 usage_00009.pdb 1 --YMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-EYSNQNNFVHDCVNI 55 usage_00010.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYNNQNNFVHDCVNI 56 usage_00011.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYNNQNNFVHDCVNI 56 usage_00012.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00013.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00014.pdb 1 ------SAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 51 usage_00015.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00016.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHNCVNI 56 usage_00017.pdb 1 -GYVLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00018.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00019.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00020.pdb 1 -GYVLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHNCVNI 56 usage_00021.pdb 1 -GYMLGSAMSRPLIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 usage_00022.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNTFVHDCVNI 56 usage_00023.pdb 1 -GYMLGSAMSRPMMHFGNDWEDRYYRENMN-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 56 usage_00024.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPCD-EYSNQNNFVHDCVNI 56 usage_00025.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00026.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00027.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 usage_00028.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-RYSNQNNFVHDCVNI 56 usage_00030.pdb 1 -GYAMGRVMSGMNYHFD-RPDEYRWWSENSAR-YPNRVYYRDYS-SPVPQDVFVADCFNI 56 usage_00031.pdb 1 --YALGSAMSGMRMNFDRPEERQWWNEN-S-NRYPNQVYYKEYNDRSVPEGRFVRDCVNI 56 usage_00032.pdb 1 -GYMLGSAMSRPLIHFGNDYEDCYYRENMH-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 usage_00033.pdb 1 GGYMLGSAMSRPMIHFGNDWEDRYYRENMN-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 57 usage_00034.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVS-EYSNQKNFVHDCVNI 56 usage_00035.pdb 1 -GYMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVS-QYSNQNNFVHDCVNI 56 usage_00036.pdb 1 --YMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNAVHDCVNI 55 usage_00037.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00038.pdb 1 -GYMLGSAMSRPMMHFGNDWEDRYYRENMN-R-YPNQVYYRPVD-QYNNQNNFVHDCVNI 56 usage_00039.pdb 1 --YMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 55 usage_00040.pdb 1 --YMLGSVMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 55 usage_00041.pdb 1 ------SAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNTFVHDCVNI 51 usage_00042.pdb 1 --YMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 55 usage_00043.pdb 1 GGYMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNTFVHDCVNI 57 usage_00044.pdb 1 GGYMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNTFVHDCVNI 57 usage_00045.pdb 1 --YMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNSFVHDCVNI 55 usage_00046.pdb 1 -GYMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNSFVHDCVNI 56 usage_00047.pdb 1 ---MLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 54 usage_00048.pdb 1 --YMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNSFVHDCVNI 55 usage_00049.pdb 1 --YMLGSAMSRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNSFVHDCVNI 55 usage_00050.pdb 1 --YMLGSAMSRPLIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 55 usage_00051.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPVD-EYSNQNNFVHDCVNI 56 usage_00052.pdb 1 --YMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 55 usage_00053.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00054.pdb 1 -GYMLGSAMNRPLIHFGNDYEDRYYRENMY-R-YPNQVYYRPVD-QYNNQNTFVHDCVNI 56 usage_00055.pdb 1 -GYMLGSAMSRPIIHFGSDYEDRYYRENMH-R-YPNQVYYRPMD-EYSNQNNFVHDCVNI 56 usage_00056.pdb 1 -GYMLGSAMSRPVMHFGNEYEDRYYRENQY-R-YPNQVMYRPID-QYGSQNSFVHDCVNI 56 usage_00057.pdb 1 -GYMLGSAMSRPMIHFGNDWEDRYYRENMY-R-YPNQVYYRPVD-QYSNQNNFVHDCVNI 56 s Ms hF e en r YPNqVyYr q fV CvNI usage_00001.pdb 57 TIKQHT-V-TTTTKG--------------------------------------------- 69 usage_00002.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCTTQYQKESQAYY-D-- 101 usage_00003.pdb 58 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQES-------- 97 usage_00004.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQESQAAY-QRA 103 usage_00005.pdb 56 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQESQ------- 96 usage_00006.pdb 56 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQESQAAY-QRA 102 usage_00007.pdb 56 TVKEHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESQAYY-Q-- 100 usage_00008.pdb 56 TVKEHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESQAYY---- 99 usage_00009.pdb 56 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYYQR-- 101 usage_00010.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00011.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00012.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYEKESQAYY-Q-- 101 usage_00013.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00014.pdb 52 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 97 usage_00015.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00016.pdb 57 TIKQHT-V-TTT-KGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 101 usage_00017.pdb 57 TIKQHT-V-T-----------------STETDVKMMERVVEQMCITQYERESQAYY-Q-- 94 usage_00018.pdb 57 TIKQHT-V-TTT-T-------------STETDVKMMERVVEQMCITQYERESQAYY---- 96 usage_00019.pdb 57 TIKQHT-V-N-----------------STETDVKMMERVVEQMCITQYERESQAYY---- 93 usage_00020.pdb 57 TIKQHT-V-TTT---E-N---------FTETDVKMMERVVEQMCITQYERES-------- 93 usage_00021.pdb 57 TVKEHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESQAY----- 99 usage_00022.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQR---------- 94 usage_00023.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCTTQYQKESQA------ 98 usage_00024.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERCSQAYY-QRG 103 usage_00025.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERE--------- 95 usage_00026.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY---- 100 usage_00027.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQRESQAY----- 99 usage_00028.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQRESQAY----- 99 usage_00030.pdb 57 TVTEYSI--GPAAKKNTSEAVAAANQTEVEMENKVVTKVIREMCVQQYREYRLA------ 108 usage_00031.pdb 57 TVTEYK--IDPNENQ--N---------VTQVEVRVMKQVIQEMCMQQYQQYQLAS----- 98 usage_00032.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQRESQAYY-Q-- 101 usage_00033.pdb 58 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAY----- 100 usage_00034.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDVKIMERVVEQMCITQYQKEYEAFQ-QR- 102 usage_00035.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAY----- 99 usage_00036.pdb 56 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAYY-D-- 100 usage_00037.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVIEQMCITQYERESQAYYQR-- 102 usage_00038.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCTTQYQKESQAYY-D-- 101 usage_00039.pdb 56 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERMVEQMCITQYERESQA-Y-YQ- 100 usage_00040.pdb 56 TVKQGE-----------N---------FTETDIKIMERVVEQMCITQYQRESQAYY-QR- 93 usage_00041.pdb 52 TVKQHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESEAYY---- 95 usage_00042.pdb 56 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAYY-DG- 101 usage_00043.pdb 58 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAYY-DGR 104 usage_00044.pdb 58 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQ----------- 94 usage_00045.pdb 56 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQES-------- 95 usage_00046.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQESQAAY-QRA 103 usage_00047.pdb 55 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-GG- 100 usage_00048.pdb 56 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQES-------- 95 usage_00049.pdb 56 TVKQHT-V-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQQESQAAY-QRA 102 usage_00050.pdb 56 TVKEHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESQAYY-Q-- 100 usage_00051.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00052.pdb 56 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYEKESQAYY-Q-- 100 usage_00053.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERESQAYY-QR- 102 usage_00054.pdb 57 TVKQHT-V-TTTTKGE-N---------FTETDIKMMERVVEQMCITQYQRESQAY----- 99 usage_00055.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCITQYERES-------- 96 usage_00056.pdb 57 TVKQHT-T-TTTTKGE-N---------FTETDIKIMERVVEQMCITQYQNEYQAAQ-RY- 102 usage_00057.pdb 57 TIKQHT-V-TTTTKGE-N---------FTETDVKMMERVVEQMCVTQYQKESQAYY-DGR 103 T usage_00001.pdb ----- usage_00002.pdb ----- usage_00003.pdb ----- usage_00004.pdb 104 A---- 104 usage_00005.pdb ----- usage_00006.pdb 103 A---- 103 usage_00007.pdb ----- usage_00008.pdb ----- usage_00009.pdb ----- usage_00010.pdb ----- usage_00011.pdb ----- usage_00012.pdb ----- usage_00013.pdb ----- usage_00014.pdb ----- usage_00015.pdb ----- usage_00016.pdb ----- usage_00017.pdb ----- usage_00018.pdb ----- usage_00019.pdb ----- usage_00020.pdb ----- usage_00021.pdb ----- usage_00022.pdb ----- usage_00023.pdb ----- usage_00024.pdb 104 S---- 104 usage_00025.pdb ----- usage_00026.pdb ----- usage_00027.pdb ----- usage_00028.pdb ----- usage_00030.pdb ----- usage_00031.pdb ----- usage_00032.pdb ----- usage_00033.pdb ----- usage_00034.pdb 103 --GAS 105 usage_00035.pdb ----- usage_00036.pdb ----- usage_00037.pdb ----- usage_00038.pdb ----- usage_00039.pdb ----- usage_00040.pdb ----- usage_00041.pdb ----- usage_00042.pdb ----- usage_00043.pdb 105 RS--- 106 usage_00044.pdb ----- usage_00045.pdb ----- usage_00046.pdb 104 A---- 104 usage_00047.pdb ----- usage_00048.pdb ----- usage_00049.pdb 103 A---- 103 usage_00050.pdb ----- usage_00051.pdb ----- usage_00052.pdb ----- usage_00053.pdb ----- usage_00054.pdb ----- usage_00055.pdb ----- usage_00056.pdb ----- usage_00057.pdb 104 RS--- 105 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################