################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:44 2021 # Report_file: c_1105_19.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00068.pdb # 2: usage_00069.pdb # 3: usage_00086.pdb # 4: usage_00087.pdb # 5: usage_00088.pdb # 6: usage_00089.pdb # 7: usage_00762.pdb # 8: usage_00763.pdb # 9: usage_00860.pdb # # Length: 102 # Identity: 33/102 ( 32.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/102 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/102 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 EKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTDLNFTRERVTEIYFSPA--SFIFEP 58 usage_00069.pdb 1 EKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTDLNFTRERVTEIYFSPA--SFIFEP 58 usage_00086.pdb 1 -KFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFYFLVA--AGTYEP 57 usage_00087.pdb 1 -KFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFYFLVA--AGTYEP 57 usage_00088.pdb 1 -KFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFYFLVA--AGTYEP 57 usage_00089.pdb 1 -KFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFYFLVA--AGTYEP 57 usage_00762.pdb 1 SKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMADIN---F-TRHRVAEVYFSSATFEP 56 usage_00763.pdb 1 SKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMADIN----RVAEVYFSS----ATFEP 52 usage_00860.pdb 1 -KFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFYFLVA--AGTYEP 57 K LEL KLDFN QS HQ E W SG e yf EP usage_00068.pdb 59 EFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVK-- 98 usage_00069.pdb 59 EFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVK-- 98 usage_00086.pdb 58 QYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRRW 99 usage_00087.pdb 58 QYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRR- 98 usage_00088.pdb 58 QYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRRW 99 usage_00089.pdb 58 QYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRR- 98 usage_00762.pdb 57 EYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVKRW 98 usage_00763.pdb 53 EYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVKRW 94 usage_00860.pdb 58 QYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRR- 98 R TK DD D LD LK FTE V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################