################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:38 2021 # Report_file: c_1337_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00031.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00273.pdb # 5: usage_00305.pdb # 6: usage_00476.pdb # 7: usage_00733.pdb # 8: usage_00877.pdb # 9: usage_00883.pdb # # Length: 50 # Identity: 1/ 50 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 50 ( 12.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 50 ( 46.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 TLPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKL- 42 usage_00036.pdb 1 TLPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKL- 42 usage_00037.pdb 1 TLPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKL- 42 usage_00273.pdb 1 -LPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKLS 42 usage_00305.pdb 1 -LPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKLS 42 usage_00476.pdb 1 ---------LRGTG-V----RGVIVGRALLEGKFTVKEAIQCWQNV---- 32 usage_00733.pdb 1 ------VAFVSQEAGNRAVLLAVAVKD--KSME-GLKALREVIRVCQ--- 38 usage_00877.pdb 1 -LPQLAIAWCLRNEGV----SSVLLGA--SNAE-QLMENIGAIQVLPKL- 41 usage_00883.pdb 1 SMAQMALSWLLKDDRV----TSVLIGA--SRAE-QLEENVQALN------ 37 v V g e l e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################