################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:06 2021 # Report_file: c_1440_87.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00048.pdb # 2: usage_00053.pdb # 3: usage_00135.pdb # 4: usage_00429.pdb # 5: usage_00430.pdb # 6: usage_00431.pdb # 7: usage_00481.pdb # 8: usage_00482.pdb # 9: usage_00666.pdb # 10: usage_00688.pdb # 11: usage_00793.pdb # 12: usage_00839.pdb # 13: usage_00840.pdb # 14: usage_00849.pdb # 15: usage_00850.pdb # 16: usage_00851.pdb # 17: usage_00853.pdb # 18: usage_00862.pdb # 19: usage_00939.pdb # 20: usage_00974.pdb # # Length: 53 # Identity: 2/ 53 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 53 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 53 ( 39.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 -FRDYVDRFYKTLRAEQ---------K--NAATETLLVQNANPDCKTILKAL- 40 usage_00053.pdb 1 -LDQFLWRKRDLYQTLYVDA-------E-EEEIIQYVVGTLQPKFKRFLRHPL 44 usage_00135.pdb 1 -FRDYIDRFYKTIRAEQAS---QE-------ATETLLVQNANPDCKTILKALG 42 usage_00429.pdb 1 -FRDYVDRFYKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKALG 46 usage_00430.pdb 1 -FRDYVDRFYKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKAL- 45 usage_00431.pdb 1 PFRDYVDRFYKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKAL- 46 usage_00481.pdb 1 -FRDYVDRFYKTLRAEQ-ASQEVK--NA---ATETLLVQNANPDCKTILKAL- 45 usage_00482.pdb 1 -FRDYVDRFYKTLRAEQ-ASQEVK--NA---ATETLLVQNANPDCKTILKAL- 45 usage_00666.pdb 1 -YEKGVDHLTNAIAVSG-Q----P-QQL-LQVLQQTLP----PPVFQMLLTKL 41 usage_00688.pdb 1 -FRDYVDRFYKTLRAEQAS---QEV-------TETLLVQNANPDCKTILKALG 42 usage_00793.pdb 1 -FRDYVDRFLKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKALG 46 usage_00839.pdb 1 -FRDYVDRFYKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKALG 46 usage_00840.pdb 1 -FRDYVDRFYKTLRAEQ-------------ASTETLLVQNANPDCKTILKALG 39 usage_00849.pdb 1 -FRDYVDRFYKTLRAEQ-----------ANAATETLLVQNANPDCKTILKAL- 40 usage_00850.pdb 1 -FRDYVDRFYKTLRAEQ-A-----------AATETLLVQNANPDCKTILKALG 40 usage_00851.pdb 1 -FRDYVDRFYKTLRAEQAS---QE--------TETLLVQNANPDCKTILKALG 41 usage_00853.pdb 1 -FRDYVDRFAKTLRAEQ-A--SQE--VK-NWMTETLLVQNANPDCKTILKALG 46 usage_00862.pdb 1 -FRDYVDRFYKTLRAEQAS---QE-------ATETLLVQNANPDCKTILKAL- 41 usage_00939.pdb 1 -FRDYVDRFYKTLRAEQ-A----S--------TETLLVQNANPDCKTILKALG 39 usage_00974.pdb 1 -FRDYVDRFYKTLRAEQ-A--SQE--VK-NW-TETLLVQNANPDCKTILKAL- 44 dr lv P k L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################