################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:00 2021 # Report_file: c_1371_144.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00144.pdb # 2: usage_00145.pdb # 3: usage_00360.pdb # 4: usage_00575.pdb # 5: usage_00577.pdb # 6: usage_00578.pdb # 7: usage_00855.pdb # 8: usage_01715.pdb # 9: usage_01716.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 59 ( 55.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 59 ( 39.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 LEEKVKQASNILPQKIVDDLKNLILNKEIIVT-RD-------EIDKIFDLAIKEYSEGL 51 usage_00145.pdb 1 LEEKVKQASNILPQKIVDDLKNLILNKEIIVT-RD-------EIDKIFDLAIKEYSEGL 51 usage_00360.pdb 1 LEEKVKQASNILPQKIVDDLKNLILNKEIIVT-RD-------EIDKIFDLAIKEYSEGL 51 usage_00575.pdb 1 LEEKVKQASNILPQKIVEDLKNLISNKEVLVT-RD-------EIDKIFDLAIK------ 45 usage_00577.pdb 1 LEEKVKQASNILPQKIVEDLKNLISNKEVLVT-RD-------EIDKIFDLAIK------ 45 usage_00578.pdb 1 LEEKVKQASNILPQKIVEDLKNLISNKEVLVT-RD-------EIDKIFDLAIK------ 45 usage_00855.pdb 1 -KTDYLMRLRKC---T---TIDTLERVIEKNKYELSDDELELFYSAADHRLAE----LT 48 usage_01715.pdb 1 ---KVKQASNILPQKIVEDLKNLISNKEVLVT-RD-------EIDKIFDLAIK------ 42 usage_01716.pdb 1 ---KVKQASNILPQKIVEDLKNLISNKEVLVT-RD-------EIDKIFDLAIK------ 42 kvkqasnil i lknli nke vt rd eidkifdlaik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################