################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:14 2021 # Report_file: c_1380_31.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00809.pdb # 2: usage_01372.pdb # 3: usage_01373.pdb # 4: usage_01385.pdb # 5: usage_01669.pdb # 6: usage_01905.pdb # 7: usage_01906.pdb # 8: usage_01983.pdb # 9: usage_02086.pdb # 10: usage_02105.pdb # 11: usage_02263.pdb # 12: usage_02307.pdb # 13: usage_02412.pdb # # Length: 98 # Identity: 4/ 98 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 98 ( 10.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 98 ( 38.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00809.pdb 1 --PALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNL---- 54 usage_01372.pdb 1 ---PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 50 usage_01373.pdb 1 ----QQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 49 usage_01385.pdb 1 ----HRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKE-------KHSA 49 usage_01669.pdb 1 ----QQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 49 usage_01905.pdb 1 ----QQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 49 usage_01906.pdb 1 ----QQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 49 usage_01983.pdb 1 ---THRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKD-------KSDP 50 usage_02086.pdb 1 ---AHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKE-------KSNA 50 usage_02105.pdb 1 ----QQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE-------EKNP 49 usage_02263.pdb 1 FPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQE-------KDNQ 53 usage_02307.pdb 1 ---THRQISRNLQEILDYIGQSVEKHRATLDPSHPRDFIDTYLLRMEKE-------KSNQ 50 usage_02412.pdb 1 -----NKLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKE-------KQNQ 48 V D pRD d l m usage_00809.pdb 55 ---IPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTK 89 usage_01372.pdb 51 NTEFYLKNLVMTTLNLFIGGTE---------------- 72 usage_01373.pdb 50 NTEFYLKNLVMTTLNLFIGGTE---------------- 71 usage_01385.pdb 50 ERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKY 87 usage_01669.pdb 50 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 87 usage_01905.pdb 50 NTEFYLKNLVMTTLNLFFAGT----------------- 70 usage_01906.pdb 50 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 87 usage_01983.pdb 51 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLK- 87 usage_02086.pdb 51 HSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLK- 87 usage_02105.pdb 50 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 87 usage_02263.pdb 54 KSEFNIENLVGTVADLFVAGT----------------- 74 usage_02307.pdb 51 HTEFDHQNLVISVLSLFFA------------------- 69 usage_02412.pdb 49 QSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKH 86 lf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################