################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:30 2021 # Report_file: c_0801_7.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00018.pdb # 4: usage_00024.pdb # 5: usage_00025.pdb # 6: usage_00027.pdb # 7: usage_00077.pdb # 8: usage_00078.pdb # 9: usage_00080.pdb # 10: usage_00081.pdb # 11: usage_00093.pdb # 12: usage_00094.pdb # 13: usage_00133.pdb # # Length: 115 # Identity: 21/115 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/115 ( 24.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/115 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -QEISVGSINLVDLAGSES-PKTE-----TK-------NIKRSLSELTNVILALLQKQ-D 45 usage_00002.pdb 1 -KESSYGTLNLIDLAGSER------RLKETQ-------AINKSLSCLGDVIHSLNLKDGS 46 usage_00018.pdb 1 -GLQCGAPLSLVDLAGSE------------------------SLSTLGLVIMALSNKE-S 34 usage_00024.pdb 1 --VIRVGKLNLVDLAGSERQ------------------KINLSLSALGLVISKLVEGA-T 39 usage_00025.pdb 1 KEVIRVGKLNLVDLAGSERQ------------------KINLSLSALGLVISKLVEGA-T 41 usage_00027.pdb 1 --SVKVSHLNLVDLAGSER------------AALKEGCNINRSLFILGQVIKKLSDGQ-V 45 usage_00077.pdb 1 ------AKMSLIDLAGSER---------------------NRSLLALGNVINALA----- 28 usage_00078.pdb 1 -QNVRIAKMSLIDLAGSER-A---------T-------NINRSLLALGNVINALADSK-- 40 usage_00080.pdb 1 -NHIRVGKLNLVDLAGS-------ERLKE------AT-KINLSLSALGNVISALVDG--- 42 usage_00081.pdb 1 ----------LVDLAGSE--------------------KINLSLSALGNVIAALA----- 25 usage_00093.pdb 1 -QAIARGKLSFVDLAGSE----------------------NKSLSALGDVISALSSGN-Q 36 usage_00094.pdb 1 -QAIARGKLSFVDLAGSER-V-----------------SINKSLSALGDVISALSSGN-Q 40 usage_00133.pdb 1 -GEKSQGILNLVDLAGSER-L-----------------SINKSLSCLGDVIHALNS--KR 39 DLAGS SL Lg VI L usage_00001.pdb 46 --HIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNS-C 97 usage_00002.pdb 47 --HVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKV---- 95 usage_00018.pdb 35 --HVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVN--- 84 usage_00024.pdb 40 --HIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAK--- 89 usage_00025.pdb 42 --HIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAK--- 91 usage_00027.pdb 46 GGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAK--- 95 usage_00077.pdb 29 ---IPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRA---- 76 usage_00078.pdb 41 ----PYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRA---- 87 usage_00080.pdb 43 --HIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAK--- 92 usage_00081.pdb 26 --HIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAK--- 75 usage_00093.pdb 37 --HIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSI- 88 usage_00094.pdb 41 --HIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRS-- 91 usage_00133.pdb 40 --HIPFRNSKLTYLLQYSLIGSSKTLMFVNISPAALHLNETINSLRFASKVN--- 89 pyR KLT l SLgG t m P L A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################