################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:30 2021 # Report_file: c_0861_81.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00559.pdb # 2: usage_00560.pdb # 3: usage_00561.pdb # 4: usage_00584.pdb # 5: usage_00585.pdb # 6: usage_00609.pdb # 7: usage_00710.pdb # # Length: 82 # Identity: 9/ 82 ( 11.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 82 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 82 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00559.pdb 1 ---GKFYDLYG------SSHSAGAMTAWAWGVSRVIDALELVP--GARIDTTKIGVTGCS 49 usage_00560.pdb 1 ---GKFYDLYG------SSHSAGAMTAWAWGVSRVIDALELVP--GARIDTTKIGVTGCS 49 usage_00561.pdb 1 ---GKFYDLYG------SSHSAGAMTAWAWGVSRVIDALELVP--GARIDTTKIGVTGCS 49 usage_00584.pdb 1 ---GKFYDLFG------RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCS 51 usage_00585.pdb 1 ---GKFYDLFG------RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCA 51 usage_00609.pdb 1 GHIIRGLDDDADNMLFR-----HIFLDTAQLAGIVMNM--------PEVDEDRVGVMGPS 47 usage_00710.pdb 1 ---GKFYDLFG------RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCA 51 gkfyDl g g tawAwgv r id iDt GVtGc usage_00559.pdb 50 RNGKGAMVAGAFEKRIVLTLPQ 71 usage_00560.pdb 50 RNGKGAMVAGAFEKRIVLTLPQ 71 usage_00561.pdb 50 RNGKGAMVAGAFEKRIVLTLPQ 71 usage_00584.pdb 52 RNGKGAFITGALVDRIALTIPQ 73 usage_00585.pdb 52 RNGKGAFITGALVDRIALTIPQ 73 usage_00609.pdb 48 QGGGLSLACAALEPRVRKVVSE 69 usage_00710.pdb 52 RNGKGAFITGALVDRIALTIPQ 73 rnGkga gA Ri lt pq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################