################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:34 2021 # Report_file: c_1021_47.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00233.pdb # 2: usage_00486.pdb # 3: usage_00487.pdb # 4: usage_00488.pdb # 5: usage_00524.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 66 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 66 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 KILLYPSSPKPNFSTHVMNIFSDHGL-------EPTKINE-VR------EVQLALGLVAA 46 usage_00486.pdb 1 KVIIIT------SSAKAKHLQKA-I-DLFKDPESKITLELWQRNNKEPELNKKLFDDVIA 52 usage_00487.pdb 1 -VIIIT------SSAKAKHLQKA-I-DLFK-D-SKITLELWQRNNKEPELNKKLFDDVIA 49 usage_00488.pdb 1 KVIIIT------SSAKAKHLQKA-I-DLFKDPESKITLELWQRNNKEPELNKKLFDDVIA 52 usage_00524.pdb 1 RITILT------SVNKANMLTKL-A-ET---KGAAADVNI-LKRTKDAEENKKLFEKIIE 48 i t ss ka l k r nkklf via usage_00233.pdb 47 G----- 47 usage_00486.pdb 53 LINSA- 57 usage_00487.pdb 50 LINSAG 55 usage_00488.pdb 53 LINSAG 58 usage_00524.pdb 49 YIRA-- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################