################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:05 2021 # Report_file: c_1368_9.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00061.pdb # 2: usage_00236.pdb # 3: usage_00237.pdb # 4: usage_00270.pdb # 5: usage_00276.pdb # 6: usage_00914.pdb # 7: usage_00915.pdb # 8: usage_00959.pdb # 9: usage_01381.pdb # 10: usage_01567.pdb # 11: usage_01568.pdb # # Length: 51 # Identity: 14/ 51 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 51 ( 49.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 51 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 ---GTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLH--- 45 usage_00236.pdb 1 PYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESG 51 usage_00237.pdb 1 PYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESG 51 usage_00270.pdb 1 ---GHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHE-- 46 usage_00276.pdb 1 ----NDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHG 47 usage_00914.pdb 1 PYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLH--- 48 usage_00915.pdb 1 PYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESG 51 usage_00959.pdb 1 PGIGPSIQAWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFH--- 48 usage_01381.pdb 1 --VGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALH--- 46 usage_01567.pdb 1 ---GHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHE-- 46 usage_01568.pdb 1 ---GHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHE-- 46 v W wGGfsV n T RFFalH l PF Ia Hl lH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################