################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:10:08 2021 # Report_file: c_0207_8.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00024.pdb # 2: usage_00052.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00116.pdb # 6: usage_00120.pdb # 7: usage_00121.pdb # 8: usage_00122.pdb # 9: usage_00123.pdb # 10: usage_00147.pdb # 11: usage_00156.pdb # 12: usage_00157.pdb # 13: usage_00162.pdb # 14: usage_00163.pdb # 15: usage_00164.pdb # 16: usage_00185.pdb # 17: usage_00186.pdb # 18: usage_00187.pdb # 19: usage_00188.pdb # # Length: 123 # Identity: 24/123 ( 19.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/123 ( 54.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/123 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00052.pdb 1 AKTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 58 usage_00053.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00054.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00116.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00120.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00121.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00122.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00123.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00147.pdb 1 KVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKQLPSKEMIFLIRQGSDEQNAKSGR 60 usage_00156.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00157.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00162.pdb 1 -KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQ--QNTTNSM 57 usage_00163.pdb 1 -KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQ--QNTTNSM 57 usage_00164.pdb 1 -KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQ--QNTTNSM 57 usage_00185.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00186.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00187.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 usage_00188.pdb 1 -KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLT--SNVNNRM 57 kTtqp Smes e e VhLpC h Tisg YI WYrQ P qgpeyv hgl N n m usage_00024.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCTVYGGA------TNK---LIFGTGTLLAVQP 108 usage_00052.pdb 59 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDRS------NQ----FYFGTGTSLTVIP 108 usage_00053.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDSR------AQK---LVFGQGTRLTINP 108 usage_00054.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDSR------AQK---LVFGQGTRLTINP 108 usage_00116.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILPL--AG-GTSYGK---LTFGQGTILTVHP 111 usage_00120.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILDNNN------DM----RFGAG-TRLTVKP 106 usage_00121.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILPL--AG-GTSYGK---LTFGQGTILTVHP 111 usage_00122.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILPL--AG-GTSYGK---LTFGQGTILTVHP 111 usage_00123.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILPL--AG-GTSYGK---LTFGQGTILTVHP 111 usage_00147.pdb 61 YSVNFKKAAKSVALTISALQLEDSAKYFCALGELAGAGGTSYGK---LTFGQGTILTVHP 117 usage_00156.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCTVYGGA------TNK---LIFGTGTLLAVQP 108 usage_00157.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCTVYGGA------TNK---LIFGTGTLLAVQP 108 usage_00162.pdb 58 AFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGS------NYK---LTFGKGTLLTVTP 108 usage_00163.pdb 58 AFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGS------NYK---LTFGKGTLLTVTP 108 usage_00164.pdb 58 AFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGS------NYK---LTFGKGTLLTVTP 108 usage_00185.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDGR------GG-ADGLTFGKGTHLIIQP 110 usage_00186.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDGR------GG-ADGLTFGKGTHLIIQP 110 usage_00187.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDGR------DG----LTFGKGTHLIIQP 107 usage_00188.pdb 58 ASLAIAEDRKSSTLILHRATLRDAAVYYCILRDGR------DG----LTFGKGTHLIIQP 107 a laia drKSstLil LrDaAvY C fg T L P usage_00024.pdb 109 NIQ 111 usage_00052.pdb --- usage_00053.pdb --- usage_00054.pdb --- usage_00116.pdb --- usage_00120.pdb --- usage_00121.pdb --- usage_00122.pdb --- usage_00123.pdb --- usage_00147.pdb --- usage_00156.pdb --- usage_00157.pdb --- usage_00162.pdb --- usage_00163.pdb --- usage_00164.pdb --- usage_00185.pdb --- usage_00186.pdb --- usage_00187.pdb --- usage_00188.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################