################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:31 2021 # Report_file: c_0775_42.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00029.pdb # 8: usage_00030.pdb # 9: usage_00547.pdb # # Length: 67 # Identity: 28/ 67 ( 41.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 67 ( 41.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 67 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -NILIINGA-------KGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 52 usage_00005.pdb 1 -NILIINGA------N-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 52 usage_00006.pdb 1 SNILIINGA-------K-QLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 52 usage_00007.pdb 1 -NILIINGA-------K---NDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 49 usage_00013.pdb 1 -NVLIINAMKEFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA 58 usage_00014.pdb 1 -NVLIINAMKEFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA 58 usage_00029.pdb 1 -NILIINGAKKFAHSN-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 58 usage_00030.pdb 1 -NILIINGAKKFAHSN-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA 58 usage_00547.pdb 1 -NVLIINAK-EFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA 57 N LIIN N TLT VA LR GH V I D YD E N LWA usage_00004.pdb 53 DVVIWQ- 58 usage_00005.pdb 53 DVVIWQ- 58 usage_00006.pdb 53 DVVIWQ- 58 usage_00007.pdb 50 DVVIWQ- 55 usage_00013.pdb 59 DTIIYQM 65 usage_00014.pdb 59 DTIIYQM 65 usage_00029.pdb 59 DVVIWQM 65 usage_00030.pdb 59 DVVIWQM 65 usage_00547.pdb 58 DTIIYQ- 63 D I Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################