################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:10 2021 # Report_file: c_0612_92.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00053.pdb # 2: usage_00152.pdb # 3: usage_00154.pdb # 4: usage_00269.pdb # 5: usage_00304.pdb # 6: usage_00305.pdb # 7: usage_00393.pdb # 8: usage_00573.pdb # 9: usage_00885.pdb # 10: usage_00886.pdb # 11: usage_00987.pdb # # Length: 89 # Identity: 14/ 89 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 89 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 89 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 ---TAHSVRTAITEAGYRHVDTAAE-YGVEKEVGKGLKAAMEAG-IDRKDLFVTSKIWCT 55 usage_00152.pdb 1 ---TKQAVKAAIK-AGYRHIDTAWA-YETEPFVGEAIKELLEDGSIKREDLFITTKVWPV 55 usage_00154.pdb 1 ---TKQAVKAAIK-AGYRHIDTAWA-YETEPFVGEAIKELLEDGSIKREDLFITTKVWPV 55 usage_00269.pdb 1 PAEVITAVKTAVK-AGYRLIDTASV-YQNEEAIGTAIKELLEEGVVKREELFITTKAWTH 58 usage_00304.pdb 1 -------LPQALK-LGFRHVDTAQI-YGNEAEVGEAIQKSG----IPRADVFLTTKVWVD 47 usage_00305.pdb 1 -------LPQALK-LGFRHVDTAQI-YGNEAEVGEAIQKSG----IPRADVFLTTKVWVD 47 usage_00393.pdb 1 ---TQRAVEEALE-VGYRHIDTA-AIYGNEEGVGAAIAASG----IARDDLFITTKLWN- 50 usage_00573.pdb 1 ---TQRAVEEALE-VGYRHIDTAAI-YGNEEGVGAAIAASG----IARDDLFITTKLWND 51 usage_00885.pdb 1 GAETANAVRWAIE-AGYRHIDTAYI-YSNERGVGQGIRESG----VPREEVWVTTKVWNS 54 usage_00886.pdb 1 GAETANAVRWAIE-AGYRHIDTAYI-YSNERGVGQGIRESG----VPREEVWVTTKVWNS 54 usage_00987.pdb 1 ---TAEVVKEAVK-LGYRSVATARL-YKNEEGVGKGLED--------HPEIFLTTKLWND 47 A G R dTA Y E vG r TtK W usage_00053.pdb 56 NLAPERVRPALENTLKDLQLDYIDLYHI- 83 usage_00152.pdb 56 LWD--EVDRSLNESLKALGLEYVDLLLQ- 81 usage_00154.pdb 56 LWD--EVDRSLNESLKALGLEYVDLLLQ- 81 usage_00269.pdb 59 ELAPGKLEGGLRESLKKLQLEYVDLYLA- 86 usage_00304.pdb 48 NYRHDAFIASVDESLRKLRTDHVDLLLL- 75 usage_00305.pdb 48 NYRHDAFIASVDESLRKLRTDHVDLLLL- 75 usage_00393.pdb 51 --D--EPAAAIAESLAKLALDQVDLYLVH 75 usage_00573.pdb 52 RHDGDEPAAAIAESLAKLALDQVDLYLV- 79 usage_00885.pdb 55 DQGYEKTLAAFERSRELLGLEYIDLYLI- 82 usage_00886.pdb 55 DQGYEKTLAAFERSRELLGLEYIDLYLI- 82 usage_00987.pdb 48 EQGYDSTLRAYEESARLLRRPVLDLYLI- 75 s L DL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################