################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:31 2021 # Report_file: c_1396_191.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00168.pdb # 4: usage_00193.pdb # 5: usage_00927.pdb # 6: usage_01184.pdb # 7: usage_01778.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 67 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 67 ( 70.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -----VEEARELAKVDLNKAVAYETARTVAFLASKAQPI-----YPKTIETYNA------ 44 usage_00017.pdb 1 -----VEEARELAKVDLNKAVAYETARTVAFLASKAQPI-----YPKTIETYNAY----- 45 usage_00168.pdb 1 TLSNSKFALSLEP-NN---EVLQSYAAHVAELRSKKLPT-----IPTT-VKMEKAC---- 46 usage_00193.pdb 1 ---------------------SEKAKELLKKYV-SNVFE-NEKTLYIYCKYVMLH-YGKD 36 usage_00927.pdb 1 -----VEKVRTQAKTDLNGAIISSLVNTITFLLKKNQPI-----YPDTLATYNQL----L 46 usage_01184.pdb 1 ----GVDELRKAADEDLNKALL-SFDNTIKFVIDKGGFL-----HHNTIEARNYL----I 46 usage_01778.pdb 1 -----SPELLSLISTTAAL-QSISSLTISLYAS------D----YASYFPYLLET----Y 40 usage_00016.pdb ------- usage_00017.pdb ------- usage_00168.pdb ------- usage_00193.pdb 37 LV-NPNE 42 usage_00927.pdb 47 LEQ---- 49 usage_01184.pdb 47 SRK---- 49 usage_01778.pdb 41 AN----- 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################