################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:24 2021 # Report_file: c_0585_23.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00010.pdb # 2: usage_00026.pdb # 3: usage_00038.pdb # 4: usage_00044.pdb # 5: usage_00054.pdb # 6: usage_00067.pdb # 7: usage_00068.pdb # 8: usage_00083.pdb # 9: usage_00097.pdb # 10: usage_00104.pdb # 11: usage_00110.pdb # 12: usage_00183.pdb # 13: usage_00185.pdb # # Length: 100 # Identity: 2/100 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/100 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/100 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --SAIYVQGLND-S----VTLDDLADFFKQCGV-VKMNKRTGQPMIHIYLDKETGKPKGD 52 usage_00026.pdb 1 --RKLFVGMLNK-Q----QSEDDVRRLFEAFGN-IE--------ECTILRGP-DGNSKGC 43 usage_00038.pdb 1 QPKRLHVSNIPF-R----FRDPDLRQMFGQFGK-IL--------DVEIIFN--ERGSKGF 44 usage_00044.pdb 1 --CRVYVGSIYY-E----LGEDTIRQAFAPFGP-IK--------SIDS-WDSVT-KHKGF 42 usage_00054.pdb 1 KDTNLYVTNLPR-T----ITDDQLDTIFGKYGS-IV--------QKNILRDKLTGRPRGV 46 usage_00067.pdb 1 ---NLFIYHLPQ-E----FGDQDILQMFMPFGN-VI--------SAKVFIDKQTNLSKCF 43 usage_00068.pdb 1 ---NLFIYHLPQ-E----FGDQDILQMFMPFGN-VI--------SAKVFIDKQTNLSKCF 43 usage_00083.pdb 1 ---NLMVNYIPT-T----VDEVQLRQLFERYGP-IE--------SVKIVCDRETRQSRGY 43 usage_00097.pdb 1 ---RVYVGSIYY-E----LGEDTIRQAFAPFGP-IK--------SIDMSWDSVTMKHKGF 43 usage_00104.pdb 1 --AYIYIGNLNR-E----LTEGDILTVFSEYGV-PV--------DVILSRDENTGESQGF 44 usage_00110.pdb 1 ---KLFIGGLPN-Y----LNDDQVKELLTSFGP-LK--------AFNLVKDSATGLSKGY 43 usage_00183.pdb 1 ---KLFVGQIPR-G----LDEQDLKPLFEEFGR-IY--------ELTVLKDRLTGLHKGC 43 usage_00185.pdb 1 -HTLLYVYNLPANKDGKSV-SNRLRRLSDNCGGKVL--------SIT----------GCS 40 G usage_00010.pdb 53 ATVSY-EDPPTAKAAVEWFDGKD--F--Q-GSKLKVSL-- 84 usage_00026.pdb 44 AFVKY-SSHAEAQAAINALHGSQT-MPGA-SSSLVVKF-- 78 usage_00038.pdb 45 GFVTFEN-SADADRAREKLHGTV--V--E-GRKIEVNN-- 76 usage_00044.pdb 43 AFVEY-EVPEAAQLALEQN-S-V--L--G-GRNIKVGR-- 72 usage_00054.pdb 47 AFVRY-NKREEAQEAISALNNVI-PE--GGSQPLSVR--- 79 usage_00067.pdb 44 GFVSY-DNPVSAQAAIQAMNGFQ--I--G-MKRLKVQL-- 75 usage_00068.pdb 44 GFVSY-DNPVSAQAAIQAMNGFQ--I--G-MKRLKVQL-- 75 usage_00083.pdb 44 GFVKF-QSGSSAQQAIAGLNGFN--I--L-NKRLKVALAA 77 usage_00097.pdb 44 AFVEY-EVPEAAQLALEQMNSVM--L--G-GRNIKVG--- 74 usage_00104.pdb 45 AYLKY-EDQRSTILAVDNLNGFK--I--G-GRALKIDH-- 76 usage_00110.pdb 44 AFCEY-VDINVTDQAIAGLNGMQ--L--G-DKKLLVQ--- 74 usage_00183.pdb 44 AFLTY-CARDSALKAQSALHEQKT-LPGM-NRPIQVKP-- 78 usage_00185.pdb 41 AILRF-INQDSAERAQKRMENED--V--F-GNRIIVSF-- 72 A v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################