################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:42 2021 # Report_file: c_1363_70.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00163.pdb # 2: usage_00490.pdb # 3: usage_00491.pdb # 4: usage_00492.pdb # 5: usage_00806.pdb # 6: usage_00807.pdb # 7: usage_00808.pdb # 8: usage_01396.pdb # 9: usage_01762.pdb # # Length: 48 # Identity: 2/ 48 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 48 ( 68.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 48 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 46 usage_00490.pdb 1 GGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 47 usage_00491.pdb 1 GGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 47 usage_00492.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 46 usage_00806.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 46 usage_00807.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELP 47 usage_00808.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 46 usage_01396.pdb 1 ---------NMALGAA-RSRINAYQTGSIIGKELSALGINTDF----- 33 usage_01762.pdb 1 -GNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL- 46 ralvent lSaheivekslrIagdicvftntnft #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################