################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:33 2021 # Report_file: c_1471_53.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00021.pdb # 2: usage_00435.pdb # 3: usage_00614.pdb # 4: usage_01079.pdb # 5: usage_01080.pdb # 6: usage_01115.pdb # 7: usage_01526.pdb # 8: usage_01527.pdb # 9: usage_01528.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 45 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 45 ( 62.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -LDKMMEQKSTAVKALTGGIAHLFKQNKV-VHVNG---------- 33 usage_00435.pdb 1 FSDCTLE--------AMRALARYSLQN---DIQT-LV-T----V- 27 usage_00614.pdb 1 ----MKD--------FHFDAISAFE---NYEIEK-MRD------- 22 usage_01079.pdb 1 -ATNVKA--------MKYLIEHYFD---NFKVDS-IE-I------ 25 usage_01080.pdb 1 --TNVKA--------MKYLIEHYFD---NFKVDS-IE-I------ 24 usage_01115.pdb 1 ----VIQ--------IKNLVKNSVD---DLKLEN-----ISVVIK 25 usage_01526.pdb 1 -ATNVKA--------MKYLIEHYFD---NFKVDS-IE-I------ 25 usage_01527.pdb 1 -ATNVKA--------MKYLIEHYFD---NFKVDS-IE-I------ 25 usage_01528.pdb 1 -ATNVKA--------MKYLIEHYFD---NFKVDS-IE-I------ 25 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################