################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:00 2021 # Report_file: c_0958_118.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00087.pdb # 2: usage_00476.pdb # 3: usage_00694.pdb # 4: usage_00695.pdb # 5: usage_00772.pdb # 6: usage_01316.pdb # 7: usage_01386.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 68 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 68 ( 61.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 GHVIAARITSE---------SG-TVQELNFRSSKNVWGYFSV-----Q----------FG 35 usage_00476.pdb 1 GHVIAARITSE---------SG-TVQELNFRSSKNVWGYFSV-----Q----------FG 35 usage_00694.pdb 1 -HCTACRITSEDPNDGFKPSGG-TLHELNFRSSSNVWGYFSV-----GNNGNIHSFSDSQ 53 usage_00695.pdb 1 GHCTACRITSEDPNDGFKPSGG-TLHELNFRSSSNVWGYFSV-----GNNGNIHSFSDSQ 54 usage_00772.pdb 1 GHVIAARITSE---------SG-TVQELNFRSSKNVWGYFSV-----Q----------FG 35 usage_01316.pdb 1 GHVIAARITS-------------TVQELNFRSSKNVWGYFSV-----A----------Q- 31 usage_01386.pdb 1 ----TVELCGR-----------WDARDVA---GG-RYRVINNVWGAET----------AQ 31 a rits t eln s vwgyfsv usage_00087.pdb 36 H-CFSWGE 42 usage_00476.pdb 36 H-CFSWGE 42 usage_00694.pdb 54 FGHIFAFG 61 usage_00695.pdb 55 F-GH---- 57 usage_00772.pdb 36 H-CFSWGE 42 usage_01316.pdb 32 F-GHCFSW 38 usage_01386.pdb 32 C-IEVGLE 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################