################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:18 2021 # Report_file: c_0669_179.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_01223.pdb # 2: usage_01224.pdb # 3: usage_01618.pdb # # Length: 101 # Identity: 14/101 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/101 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/101 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01223.pdb 1 ITVASIGTAYKYNNDLTLRAGYSYAQ------LILPVIPAYL--KRHVTFGGEYDFDKDS 52 usage_01224.pdb 1 ITVASIGTAYKYNNDLTLRAGYSYAQ------LILPVIPAYL--KRHVTFGGEYDFDKDS 52 usage_01618.pdb 1 -------TTYYYDDNWTFRTGIAFDDSPVPAQNRSISI--PDQDRFWLSAGTTYAFNKDA 51 TaYkYnndlTlRaGysyaq lilpvI yl krhvtfGgeYdFdKDs usage_01223.pdb 53 RINLAISFGLR--ERVQ-TTEMLRQSHSQINAVVSYSKNFH 90 usage_01224.pdb 53 RINLAISFGLR--ERVQ-TTEMLRQSHSQINAVVSYSKNFH 90 usage_01618.pdb 52 SVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF- 91 rinlaiSfglr ervq ttemlrqshsqinavvsysknF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################