################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:48 2021 # Report_file: c_0545_77.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00239.pdb # 2: usage_00312.pdb # 3: usage_00695.pdb # 4: usage_00732.pdb # 5: usage_00736.pdb # 6: usage_00894.pdb # 7: usage_00988.pdb # # Length: 197 # Identity: 9/197 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/197 ( 35.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 111/197 ( 56.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 ----------------------------------LKASKFAVQ--SYAALVLARQQKA-P 23 usage_00312.pdb 1 ----------------------------------LKASKFAVQ--SYAALVLARQQKA-P 23 usage_00695.pdb 1 SDEKRRASVDIGISRLLQQRDNGGFALWDKNGDE----EYWLTAYVDFLVRAGEQGYSVP 56 usage_00732.pdb 1 -----------------------------------QASTFAAQ--AYAALVLARQQKA-P 22 usage_00736.pdb 1 ----------------------------------TQASTFAAQ--AYAALVLARQQKA-P 23 usage_00894.pdb 1 ----------------------------------LKASKFAVQ--SYAALVLARQQKA-P 23 usage_00988.pdb 1 ---------N------------------------TQASTFAAQ--AYAALVLARQQKA-P 24 fa q yaalvlarQqka P usage_00239.pdb 24 LGALREIWEHRADAASGLPLLQLG----VALKTMGDATRGEEAIALALKTPR-----IWL 74 usage_00312.pdb 24 LGALREIWEHRADAASGLPLLQLG----VALKTMGDATRGEEAIALALKTPRNSDERIWL 79 usage_00695.pdb 57 TDAINRGNERLL------RYLQDPGSIP----YAD-NLKA-------------------- 85 usage_00732.pdb 23 LGTLREIWERRSQAASGLPL-QLG----IALNT-GDARRGEEAITLALNTPRQDE-RQWI 75 usage_00736.pdb 24 LGTLREIWERRSQAASGLPLMQLG----IALNTMGDARRGEEAITLALNTPRQDE-RQWI 78 usage_00894.pdb 24 LGALREIWEHRADAASGLPLLQLG----VALKTMGDATRGEEAIALALKTPRNSDERIWL 79 usage_00988.pdb 25 LGTLREIWERRSQAASGLPLMQLG----IALNTMGDARRGEEAITLALNTPRQDE-RQWI 79 lg lreiwE r pl Qlg t g a rg usage_00239.pdb 75 GDYGSSLRDNALMLSLLEENKL-LPDEQYTLLNTLS-QQAFGERWLSTQESNALFLAART 132 usage_00312.pdb 80 GDYGSSLRDNALMLSLLEENKL-LPDEQYTLLNTLS-QQAFGERWLSTQESNALFLAART 137 usage_00695.pdb 86 ----SKFAVQSYAALVLARQQKAPLGALREIWEHRAD-----A--ASGLPLLQLGVALKT 134 usage_00732.pdb 76 ADYGSSLRDNAL-LSLLEENNL-RPDAQNALLSSLS-EQAFGQRWLSTQENNALFLAAHS 132 usage_00736.pdb 79 ADYGSSLRDNALMLSLLEENNL-RPDAQNALLSSLS-EQAFGQRWLSTQENNALFLAA-- 134 usage_00894.pdb 80 GDYGSSLRDNALMLSLLEENKL-LPDEQYTLLNTLS-QQAFGERWLSTQESNALFLAART 137 usage_00988.pdb 80 ADYGSSLRDNALMLSLLEENNL-RPDAQNALLSSLS-EQAFGQRWLSTQENNALFLAA-- 135 Sslrdnal lslLeen l pd q ll ls lStqe naLflAa usage_00239.pdb 133 IQD-----L-------- 136 usage_00312.pdb 138 I---------------- 138 usage_00695.pdb 135 GD-ATRGEEAIALALKT 150 usage_00732.pdb 133 R---------------- 133 usage_00736.pdb ----------------- usage_00894.pdb 138 I---------------- 138 usage_00988.pdb ----------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################