################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:45 2021 # Report_file: c_1123_4.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00029.pdb # 2: usage_00034.pdb # 3: usage_00114.pdb # 4: usage_00168.pdb # 5: usage_00210.pdb # 6: usage_00253.pdb # 7: usage_00336.pdb # 8: usage_00347.pdb # 9: usage_00435.pdb # 10: usage_00472.pdb # 11: usage_00518.pdb # 12: usage_00573.pdb # # Length: 130 # Identity: 48/130 ( 36.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/130 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/130 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00034.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00114.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00168.pdb 1 YNRGLCVVDVAEAMAKDTQMDAAA----MERVLHDACVCGWMIEMLQAHFLVEDDIMDHS 56 usage_00210.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00253.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00336.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00347.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00435.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00472.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00518.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 usage_00573.pdb 1 YNRGLTVVVAFRELVE--------PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSS 52 YNRGLtVVvafrelve dadsLqrAwtvGWcvElLQAfFLVaDDIMDsS usage_00029.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00034.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00114.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00168.pdb 57 KTRRGKPCWYLHPGVTAQVAINDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTT 116 usage_00210.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00253.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00336.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00347.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00435.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00472.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00518.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 usage_00573.pdb 53 LTRRGQICWYQKPGVG-LDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTE 111 lTRRGqiCWYqkPGVg ldAINDanlLeAciyrllklYcreqPyylnlielFlqssyqTe usage_00029.pdb 112 IGQTLDLLTA 121 usage_00034.pdb 112 IGQTLDLLTA 121 usage_00114.pdb 112 IGQTLDLLT- 120 usage_00168.pdb 117 IGQLYDVTS- 125 usage_00210.pdb 112 IGQTLDLLTA 121 usage_00253.pdb 112 IGQTLDLLT- 120 usage_00336.pdb 112 IGQTLDLLTA 121 usage_00347.pdb 112 IGQTLDLLTA 121 usage_00435.pdb 112 IGQTLDLLT- 120 usage_00472.pdb 112 IGQTLDLLTA 121 usage_00518.pdb 112 IGQTLDLLTA 121 usage_00573.pdb 112 IGQTLDLLTA 121 IGQtlDllt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################