################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:40 2021 # Report_file: c_0610_40.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00055.pdb # 2: usage_00056.pdb # 3: usage_00057.pdb # 4: usage_00256.pdb # 5: usage_00563.pdb # 6: usage_00666.pdb # 7: usage_00667.pdb # # Length: 72 # Identity: 11/ 72 ( 15.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 72 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 72 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 -----GHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 55 usage_00056.pdb 1 -----GHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 55 usage_00057.pdb 1 -----GHDASIAHTETFAPILYVFKFKNEEEVFAWNNEV--GLSSSIFTKDLGRIFRWLG 53 usage_00256.pdb 1 TQDML---CTHEE--TFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAE 55 usage_00563.pdb 1 -----DNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFAL 55 usage_00666.pdb 1 -----GHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 55 usage_00667.pdb 1 -----GHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 55 ia tFaPi v Kf eeE a N GLss ft Dl i r usage_00055.pdb 56 PKGSDCGIVNVN 67 usage_00056.pdb 56 PKGSDCGIVNVN 67 usage_00057.pdb 54 PKGSDCGIVNVN 65 usage_00256.pdb 56 --QLEVGMVGVN 65 usage_00563.pdb 56 --QIDSGMTHVN 65 usage_00666.pdb 56 PKGSDCGIVNVN 67 usage_00667.pdb 56 PKGSDCGIVNVN 67 d G v VN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################