################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:09 2021 # Report_file: c_0932_219.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01027.pdb # 2: usage_01028.pdb # 3: usage_01212.pdb # 4: usage_01493.pdb # 5: usage_01600.pdb # 6: usage_01962.pdb # 7: usage_01963.pdb # # Length: 72 # Identity: 0/ 72 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 72 ( 6.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 72 ( 73.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01027.pdb 1 --RVTTVSESTKRENMDFSISI--------SNITPADAGTYYCVKFR----KGSPDT-EF 45 usage_01028.pdb 1 --RVTTVSDLTKRNNMDFSIRI--------SNITPADAGTYYCVKFR----KGSPDHVEF 46 usage_01212.pdb 1 ----------------GGAPAGGNLRDSTA-------SFALTTCRLQGGSQR-PP--C-- 32 usage_01493.pdb 1 FS-SSGY-------GTDFVFT-------------SEDVADYYCLQSD-----NLP--Y-T 31 usage_01600.pdb 1 -S-GSRS-------GTDFTLTI--------SSLQPEDFATYYCQQSQ----W-YP----I 34 usage_01962.pdb 1 -S-GSRS-------GTDFTLTI--------SSLQPEDFATYYCQQFKR---Q-KE--P-I 36 usage_01963.pdb 1 -S-GSRS-------GTDFTLTI--------SSLQPEDFATYYCQQFKR---Q-KE--P-I 36 df yyc usage_01027.pdb 46 KSGAGTELSVRA 57 usage_01028.pdb 47 KSGAGTELSV-- 56 usage_01212.pdb 33 -NYNGGTST--- 40 usage_01493.pdb 32 --FG-------- 33 usage_01600.pdb 35 TFGQGTKVEI-- 44 usage_01962.pdb 37 TFGQGTKV---- 44 usage_01963.pdb 37 TFGQGTKV---- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################