################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:15 2021 # Report_file: c_0188_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00018.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00038.pdb # 5: usage_00039.pdb # 6: usage_00046.pdb # 7: usage_00047.pdb # 8: usage_00065.pdb # # Length: 136 # Identity: 45/136 ( 33.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/136 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/136 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 LIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKN 60 usage_00036.pdb 1 LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTN 60 usage_00037.pdb 1 LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKN 60 usage_00038.pdb 1 LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKN 60 usage_00039.pdb 1 LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKN 60 usage_00046.pdb 1 -IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKN 59 usage_00047.pdb 1 -IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKN 59 usage_00065.pdb 1 LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTN 60 IPL N L G LP YG G R W DH R V G aGE Y IGG E N usage_00018.pdb 61 LDVVETICELLEELAPN-KPHGVAH-YRDLITFVA------LRYAIDASKIARELGCVPQ 112 usage_00036.pdb 61 RELTGILLDSLG-------------ADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQ 107 usage_00037.pdb 61 LDVVFTICDLLDEIVPKA-----TS-YREQITYVADRPGHDRRYAIDAGKISRELGWKPL 114 usage_00038.pdb 61 LDVVFTICDLLDEIVPKA-----TS-YREQITYVADRPGHDRRYAIDAGKISRELGWKPL 114 usage_00039.pdb 61 LDVVFTICDLLDEIVPKA-----TS-YREQITYVADRPGHDRRYAIDAGKISRELGWKPL 114 usage_00046.pdb 60 LDVVFTICDLLDEIVPKA-----TS-YREQITYVADRPGHDRRYAIDAGKISRELGWKPL 113 usage_00047.pdb 60 LDVVFTICDLLDEIVPKA-----TS-YREQITYVADRPGHDRRYAIDAGKISRELGWKPL 113 usage_00065.pdb 61 RELTGILLDSLG-------------ADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQ 107 d L VA RY D gKI RELG P usage_00018.pdb 113 ETFESGMRKTVQWYLA 128 usage_00036.pdb 108 VSFADGLARTVRWYRE 123 usage_00037.pdb 115 ETFESGIRKTVEWYLA 130 usage_00038.pdb 115 ETFESGIRKTVEWYLA 130 usage_00039.pdb 115 ETFESGIRKTVEWYLA 130 usage_00046.pdb 114 ETFESGIRKTVEWYLA 129 usage_00047.pdb 114 ETFESGIRKTVEWYLA 129 usage_00065.pdb 108 VSFADGLARTVRWYRE 123 F G TV WY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################