################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:10 2021 # Report_file: c_1257_34.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00026.pdb # 4: usage_00027.pdb # 5: usage_00048.pdb # 6: usage_00133.pdb # 7: usage_00136.pdb # 8: usage_00194.pdb # 9: usage_00221.pdb # 10: usage_00329.pdb # 11: usage_00354.pdb # 12: usage_00373.pdb # 13: usage_00374.pdb # 14: usage_00375.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 46 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 46 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 GDRILAINSSSLK-GKPLS--EAIHLLQM--AGETV-TLKIK-KQT 39 usage_00003.pdb 1 GDRILAINSSSLK-GKPLS--EAIHLLQM--AGETV-TLKIK-KQ- 38 usage_00026.pdb 1 GDQILEVNGIDLR-KATHD--EAINVLRQ--TPQRV-RLTLY-RDE 39 usage_00027.pdb 1 GDQILEVNGIDLR-KATHD--EAINVLRQ--TPQRV-RLTLY-RDE 39 usage_00048.pdb 1 GDIILAVNDRPLV-DLSYD--SALEVLRG--IASETHVVLILRGP- 40 usage_00133.pdb 1 NDKIVAVDGVNIQ-GFANH--DVVEVLRN--AGQVV-HLTLV-RR- 38 usage_00136.pdb 1 GDIILAVNDRPLV-DLSYD--SALEVLRG--IASETHVVLILRGP- 40 usage_00194.pdb 1 GDRVLAVNGVSLE-GATHK--QAVETLRN--TGQVV-HLLLE-KG- 38 usage_00221.pdb 1 NDRVLAINGHDLK-YGTPE--LAAQIIQA--SGERV-NLTIA-RPG 39 usage_00329.pdb 1 GDKLLEVNGVALQ-GAEHH--EAVEALRG--AGTAV-QMRVW-RE- 38 usage_00354.pdb 1 -HAVLAINGMDVNGRYTADGKEVLEYLGNPANY-PV-SIRFG-R-- 40 usage_00373.pdb 1 GDRVLAVNGVSLE-GATHK--QAVETLRN--TGQVV-HLLLE-KGQ 39 usage_00374.pdb 1 GDRVLAVNGVSLE-GATHK--QAVETLRN--TGQVV-HLLLE-KGQ 39 usage_00375.pdb 1 GDRVLAVNGVSLE-GATHK--QAVETLRN--TGQVV-HLLLE-KGQ 39 d l n l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################