################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:07:17 2021 # Report_file: c_1357_171.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00078.pdb # 2: usage_00389.pdb # 3: usage_00390.pdb # 4: usage_00449.pdb # 5: usage_00461.pdb # 6: usage_00517.pdb # 7: usage_00622.pdb # 8: usage_00834.pdb # 9: usage_00835.pdb # 10: usage_00936.pdb # 11: usage_01012.pdb # 12: usage_01013.pdb # 13: usage_01020.pdb # 14: usage_01158.pdb # 15: usage_01175.pdb # 16: usage_01364.pdb # 17: usage_01462.pdb # 18: usage_01571.pdb # # Length: 51 # Identity: 19/ 51 ( 37.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 51 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 51 ( 3.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 -PWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS 50 usage_00389.pdb 1 ARWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 50 usage_00390.pdb 1 ARWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 50 usage_00449.pdb 1 APWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQM- 50 usage_00461.pdb 1 APWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMY 51 usage_00517.pdb 1 ARWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 50 usage_00622.pdb 1 APWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS 51 usage_00834.pdb 1 ARWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 50 usage_00835.pdb 1 ARWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 50 usage_00936.pdb 1 APWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMY 51 usage_01012.pdb 1 VRWMEQVEPEYWERNTQIAKGNEQIFRVNLRTALRYYNQSAGGSHTFQRM- 50 usage_01013.pdb 1 VRWMEQVEPEYWERNTQIAKGNEQIFRVNLRTALRYYNQSAGGSHTFQRM- 50 usage_01020.pdb 1 APWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMY 51 usage_01158.pdb 1 APWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS 51 usage_01175.pdb 1 -RWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVI- 49 usage_01364.pdb 1 APWMEQEGPEYWERETQRAKGNEQSFHVSLRTLLGYYNQSESGSHTIQWMY 51 usage_01462.pdb 1 -PWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS 50 usage_01571.pdb 1 -PWMEKEGPEYWDRETQISKENALWYREALNNLRGYYNQSEAGSHTLQEMY 50 W Eq PEYW T K q rv L YYNQS GSHT Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################