################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:20 2021 # Report_file: c_0362_46.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00016.pdb # 2: usage_00021.pdb # 3: usage_00056.pdb # 4: usage_00319.pdb # 5: usage_00416.pdb # # Length: 99 # Identity: 10/ 99 ( 10.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 99 ( 29.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 99 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 DHDGLRTLRHAV-TWTQINSGE-YLDLQGKRLLLEAHAADILNVHG----QVTDVMRIGW 54 usage_00021.pdb 1 -TDGFALIKRAHPTVKF-TTGEHEYSRYGFRKLVEGRNLDIIQPDV-WLGGLTELLKVAA 57 usage_00056.pdb 1 DIEGHAQLAAAL-DTPI-ATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMD 58 usage_00319.pdb 1 DHEGHAALALQF-DTPI-ATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIAS 58 usage_00416.pdb 1 DHEGHAALALQF-DTPI-ATGE-LTSAAEHGDLIRHRAADYL-PDAPRVGGITPFLKIAS 56 G a l tGE s L a D pd g t lki usage_00016.pdb 55 LAAELGIPISIGNTFL-EAGVHMAVALPEVEWLEYS--- 89 usage_00021.pdb 58 LAAAYDVPVVPHAS--GPYSYHFQISQPNTPFQEYLANS 94 usage_00056.pdb 59 LAAKHGRKLAPHFA--MEVHLHLSAAYPLEPWLEHF--- 92 usage_00319.pdb 59 LAEHAGLMLAPHFA--MELHVHLAAAYPREPWVEHF--- 92 usage_00416.pdb 57 LAEHAGLL-APHF---AELHVHLAAAYPREPWVEHF--- 88 LA g ph e H a P pw E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################