################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:08 2021 # Report_file: c_0392_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00052.pdb # 5: usage_00053.pdb # 6: usage_00054.pdb # 7: usage_00055.pdb # 8: usage_00118.pdb # 9: usage_00119.pdb # 10: usage_00120.pdb # 11: usage_00121.pdb # 12: usage_00212.pdb # # Length: 84 # Identity: 53/ 84 ( 63.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 84 ( 63.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 84 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --LRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVA 58 usage_00010.pdb 1 --LRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVA 58 usage_00011.pdb 1 --LRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVA 58 usage_00052.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00053.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00054.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00055.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00118.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00119.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00120.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00121.pdb 1 KPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVA 60 usage_00212.pdb 1 --LRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVA 58 L L VSLSKEIY HGEPIPVTV VTN T K VKKIKV VEQ NVVLYSSDYY K VA usage_00009.pdb 59 AEEAQEKVPPNSSLTKT------- 75 usage_00010.pdb 59 AEEAQEKVPP-------------- 68 usage_00011.pdb 59 AEEAQEKVPP-------------- 68 usage_00052.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00053.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00054.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00055.pdb 61 SEETQEKVQPNSTLTKTLVLVPL- 83 usage_00118.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00119.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00120.pdb 61 SEETQEKVQPNSTLTKTLVLVPLL 84 usage_00121.pdb 61 SEETQEKVQPNSTLTKTLVLVPL- 83 usage_00212.pdb 59 AEEAQEKVPPNSSLTKT------- 75 EE QEKV P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################