################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:38 2021 # Report_file: c_0708_47.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00147.pdb # 2: usage_00250.pdb # 3: usage_00251.pdb # 4: usage_00372.pdb # 5: usage_00373.pdb # 6: usage_00531.pdb # 7: usage_00545.pdb # 8: usage_00546.pdb # 9: usage_00547.pdb # # Length: 80 # Identity: 34/ 80 ( 42.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 80 ( 42.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 80 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00147.pdb 1 -----IVKSGQVYSVDGPSEDGTPYDSRKHPNALDPGVFYDKEGNLWMVYGSWFGGIYIL 55 usage_00250.pdb 1 -----FLKSGMEG----TSSDGTPYDATKHPNVVAPHTFFDKDGKLWMVYGSYSGGIFIL 51 usage_00251.pdb 1 -----FLKSGMEG----TSSDGTPYDATKHPNVVAPHTFFDKDGKLWMVYGSYSGGIFIL 51 usage_00372.pdb 1 FLKSG------DG----ISNDGTPYDATKHPNVVDPHTFFDQNGKLW-VYGSYSG-GIFI 48 usage_00373.pdb 1 FLKSG------DG----ISNDGTPYDATKHPNVVDPHTFFDQNGKLW-VYGSYSG-GIFI 48 usage_00531.pdb 1 -----IVKSGQVYSVDGPSEDGTPYDSRKHPNALDPGVFYDKEGNLWMVYGSWFGGIYIL 55 usage_00545.pdb 1 -----FLKSGMEG----TSSDGTPYDATKHPNVVDPHTFFDKDGKLWMVYGSYSGGIFIL 51 usage_00546.pdb 1 -----FLKSGMEG----TSSDGTPYDATKHPNVVDPHTFFDKDGKLWMVYGSYSGGIFIL 51 usage_00547.pdb 1 -----FLKSGMEG----TSSDGTPYDATKHPNVVDPHTFFDKDGKLWMVYGSYSGGIFIL 51 S DGTPYD KHPN P F D G LW VYGS G usage_00147.pdb 56 KLDPNTGLPLPGQGYGKRLV 75 usage_00250.pdb 52 EMNPKTGFPLPGQGYGKKLL 71 usage_00251.pdb 52 EMNPKTGFPLPGQGYGKKLL 71 usage_00372.pdb 49 LEDKKTGFPLPGQGYGKKLI 68 usage_00373.pdb 49 LEDKKTGFPLPGQGYGKKLI 68 usage_00531.pdb 56 KLDPNTGLPLPGQGYGKRLV 75 usage_00545.pdb 52 EMNPKTGFPLPGQGYGKKLL 71 usage_00546.pdb 52 EMNPKTGFPLPGQGYGKKLL 71 usage_00547.pdb 52 EMNPKTGFPLPGQGYGKKLL 71 TG PLPGQGYGK L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################