################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:15 2021 # Report_file: c_1411_49.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00112.pdb # 2: usage_00177.pdb # 3: usage_00260.pdb # 4: usage_00670.pdb # 5: usage_00671.pdb # 6: usage_00730.pdb # 7: usage_00731.pdb # 8: usage_01028.pdb # # Length: 56 # Identity: 4/ 56 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 56 ( 10.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 56 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 RLG-TLKNFENFKNMYSKLIDHLMDLYN----ITEYDKEKELNLFYNYHIK----- 46 usage_00177.pdb 1 RVQ-DLFDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLRPMV 55 usage_00260.pdb 1 RVG-DLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMV 55 usage_00670.pdb 1 RICDLLSDFDEFSARFKNLAHQHQSMFP----TLEIDVEGQLKRLKGFAERIRPMV 52 usage_00671.pdb 1 RICDLLSDFDEFSARFKNLAHQHQSMFP----TLEIDVEGQLKRLKGFAERI---- 48 usage_00730.pdb 1 RICDLLSDFDEFSARFKNLAHQHQSMFP----TLEIDVEGQLKRLKGFAERIRPMV 52 usage_00731.pdb 1 RICDLLSDFDEFSARFKNLAHQHQSMFP----TLEIDVEGQLKRLKGFAERI---- 48 usage_01028.pdb 1 R-VHHLF-DPTFPAKFRKLVEGRFKRYG----HFEFDTEGEIEMYLAFAERLRPFI 50 R L F D l a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################