################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:38 2021 # Report_file: c_1080_17.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00112.pdb # 2: usage_00168.pdb # 3: usage_00169.pdb # 4: usage_00216.pdb # 5: usage_00224.pdb # 6: usage_00228.pdb # 7: usage_00229.pdb # 8: usage_00434.pdb # 9: usage_00460.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 66 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 66 ( 47.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 ------TDAQLFSKFT-GNVVYVVNSENNN---KDEVKKGKELIEATGA------K-LLG 43 usage_00168.pdb 1 TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI 47 usage_00169.pdb 1 TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI 47 usage_00216.pdb 1 TPAELRVHFDKLG--W-S-RVVAFQTR---NPMHRAHRELTVRAARSRQ------ANVLI 47 usage_00224.pdb 1 TPEEVRAFFRQRG--W-R-KVVAFQTR---NAPHRAHEYLIRLGLELAD------G-VLV 46 usage_00228.pdb 1 TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI 47 usage_00229.pdb 1 TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI 47 usage_00434.pdb 1 ----LDELVKEKE--VDQ-VIVVTVD----------NPFANQAWAKSLGVKDTTHIKFAS 43 usage_00460.pdb 1 TPKQVREEIKSLG--L-D-KIVAFQTR---NPMHRVHEELTKRAMEKVG------GGLLL 47 v l usage_00112.pdb 44 VVLNR- 48 usage_00168.pdb 48 HP---- 49 usage_00169.pdb 48 HP---- 49 usage_00216.pdb 48 HPV-VG 52 usage_00224.pdb 47 HPI-LG 51 usage_00228.pdb 48 HP---- 49 usage_00229.pdb 48 HP---- 49 usage_00434.pdb 44 DP---- 45 usage_00460.pdb 48 HP---- 49 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################