################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:23 2021 # Report_file: c_0070_20.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00249.pdb # 6: usage_00250.pdb # # Length: 228 # Identity: 122/228 ( 53.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/228 ( 53.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/228 ( 1.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 60 usage_00010.pdb 1 --KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 58 usage_00011.pdb 1 --KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 58 usage_00012.pdb 1 -KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 59 usage_00249.pdb 1 GKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEAMKKRVEPLAEEVKGFVCGHCDV 60 usage_00250.pdb 1 GKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEAMKKRVEPLAEEVKGFVCGHCDV 60 GLI G ANN SIA GIA GA LAFTY E KRV P A E DV usage_00009.pdb 61 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 120 usage_00010.pdb 59 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 118 usage_00011.pdb 59 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 118 usage_00012.pdb 60 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 119 usage_00249.pdb 61 SDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFMMTMNISVYSLTA 120 usage_00250.pdb 61 SDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFMMTMNISVYSLTA 120 S N K G LDF VH F KE L G S S F M ISVYSL usage_00009.pdb 121 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 180 usage_00010.pdb 119 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 178 usage_00011.pdb 119 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 178 usage_00012.pdb 120 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 179 usage_00249.pdb 121 LTKRAEKLMSDGGSILTLTYYGAEKVVPNYNVMGVAKAALEASVKYLAVDLGPKHIRVNA 180 usage_00250.pdb 121 LTKRAEKLMSDGGSILTLTYYGAEKVVPNYNVMGVAKAALEASVKYLAVDLGPKHIRVNA 180 LT L G S LTL Y G K YNVMG AKAALE V YLAVDLG HIRVNA usage_00009.pdb 181 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL- 227 usage_00010.pdb 179 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL- 225 usage_00011.pdb 179 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS 226 usage_00012.pdb 180 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL- 226 usage_00249.pdb 181 ISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLS 228 usage_00250.pdb 181 ISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLS 228 SAGPI TLA SGI DFR ILKWNE NAPLR V EEVG YLL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################