################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:17 2021 # Report_file: c_0863_163.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00224.pdb # 2: usage_00225.pdb # 3: usage_00397.pdb # 4: usage_00412.pdb # 5: usage_00413.pdb # 6: usage_00485.pdb # 7: usage_00624.pdb # 8: usage_00625.pdb # 9: usage_00626.pdb # 10: usage_00627.pdb # 11: usage_00888.pdb # 12: usage_00889.pdb # 13: usage_01137.pdb # 14: usage_01346.pdb # 15: usage_01347.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 57 ( 19.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 57 ( 35.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 ----TAYVTQQVKQALLPLTKEDIDTLILGCT--HYPLLESYIKKELGEDVTIIS-- 49 usage_00225.pdb 1 ----TAYVTQQVKQALLPLTKEDIDTLILGCT--HYPLLESYIKKELGEDVTIIS-- 49 usage_00397.pdb 1 ----SEMAYEVVRETLQPLKNTDIDTLILGCT--HYPILGPVIKQVMGDKVQLIS-- 49 usage_00412.pdb 1 ----SAIAKKVVAESLLPLKSTKIDTVILGCT--HYPLLKPIIENFGDGVAVIN--- 48 usage_00413.pdb 1 ----SAIAKKVVAESLLPLKSTKIDTVILGCT--HYPLLKPIIENFGDGVAVIN--- 48 usage_00485.pdb 1 -----------LMERVPEHLEA-SDLFLTVDCGIT-NHAELRELLE--NGVEVIVTD 42 usage_00624.pdb 1 ----SSVAKKIVAETLQALQLKGLDTLILGCT--HYPLLRPVIQNVMGSHVTLID-- 49 usage_00625.pdb 1 ----SSVAKKIVAETLAPLTTKKIDTLILGCT--HYPLLRPIIQNVMGENVQLID-- 49 usage_00626.pdb 1 -EYHSSVAKKIVAETLAPLTTKKIDTLILGCT--HYPLLRPIIQNVMGENVQLID-- 52 usage_00627.pdb 1 ----SSVAKKIVAETLAPLTTKKIDTLILGCT--HYPLLRPIIQNVMGENVQLIDS- 50 usage_00888.pdb 1 L---DQTADEIVKTSLYPLKDTSIDSLILGCT--HYPILKEAIQRYMGEHVNIIS-- 50 usage_00889.pdb 1 ------TADEIVKTSLYPLKDTSIDSLILGCT--HYPILKEAIQRYMGEHVNIISS- 48 usage_01137.pdb 1 -------VLGLAQGYLEPLQRAEVDTLVLGCT--HYPLLSGLIQLAMGENVTLVS-- 46 usage_01346.pdb 1 ----SAIAKKVVAESLLPLKSTKIDTVILGCT--HYPLLKPIIENFGDGVAVIN--- 48 usage_01347.pdb 1 ----SAIAKKVVAESLLPLKSTKIDTVILGCT--HYPLLKPIIENFGDGVAVIN--- 48 l l D lgct h p l i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################