################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:14 2021 # Report_file: c_0282_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00007.pdb # 3: usage_00012.pdb # 4: usage_00025.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00041.pdb # 9: usage_00042.pdb # 10: usage_00044.pdb # 11: usage_00046.pdb # 12: usage_00050.pdb # 13: usage_00065.pdb # # Length: 90 # Identity: 27/ 90 ( 30.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 90 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 90 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 EVQLVESGGGLVQAGGSLRLSCAASGR-TFS--WSAVGWFRQAPGKEREFVAAIRWS-G- 55 usage_00007.pdb 1 -VQLQESGGGLVQPGGSLKLSCAASGFT-F-R-DYYMYWVRQTPEKRLEWVAFISNG-G- 54 usage_00012.pdb 1 -VILVESGGGLVKPGGSLKLSCAASGFT-F-S-SYTMSWVRQTPEKRLEWVATISSG-G- 54 usage_00025.pdb 1 -VKLVESGGGLVQPGGSLRLSCATSGFS-F-T-DYYMAWVRQPPGKALEWLAFIRNKANG 56 usage_00032.pdb 1 -AALLESGGGLVKPGGSLKLSCTASGIT-F-S-RYIMSWVRQIPEKRLEWVASISSG-G- 54 usage_00033.pdb 1 -AALLESGGGLVKPGGSLKLSCTASGIT-F-S-RYIMSWVRQIPEKRLEWVASISSG-G- 54 usage_00034.pdb 1 -VKLLESGGGLVQPGGSQKLSCAASGFD-F-S-GYWMSWVRQAPGKGLEWIGEINPD-S- 54 usage_00041.pdb 1 -VKLLESGGGLVQPGGSLKLSCAASGFD-F-S-RYWMSWVRQAPGKGLEWIGQINPH-S- 54 usage_00042.pdb 1 -VKLLESGGGLVQPGGSLKLSCAASGFD-F-S-RYWMSWVRQAPGKGLEWIGQINPH-S- 54 usage_00044.pdb 1 QVQLVESGGGLVRPGGSLRLSCVDSER----TSYP-MGWFRRAPGKEREFVASITWS-G- 53 usage_00046.pdb 1 -VQLVESGGGLVQPGRSLRLSCAASGFT-F-D-DYAMHWVRQAPGKGLEWVSAITWN-S- 54 usage_00050.pdb 1 -VHLVESGGGLVKPGGSLKLSCAASGFT-F-S-GYYMYWVRQTPEKRLEWVASISDG-G- 54 usage_00065.pdb 1 --QLVESGGGLVQPGGSLRLSCSASGFT-F-S-TYSMHWVRQAPGKGLEYVSAITGE-G- 53 L ESGGGLV pGgSl LSC Sg m W Rq P K E I usage_00001.pdb 56 GSPYYADSVKDRFTISRDNAKNTVYLQMNS 85 usage_00007.pdb 55 GSTYYPDTVKGRFTISRDNAKNTLYLQMS- 83 usage_00012.pdb 55 GNTYYPDSVKGRFTISRDNAKNNLYLQMS- 83 usage_00025.pdb 57 YTTDYSASVKGRFTISRDNSQSILYLQMN- 85 usage_00032.pdb 55 -ITYYPDSVAGRFTISRDNVRNILYLQMS- 82 usage_00033.pdb 55 -ITYYPDSVAGRFTISRDNVRNILYLQMS- 82 usage_00034.pdb 55 STINYTPSLKDKFIISRDNAKNTLYLQMS- 83 usage_00041.pdb 55 STINYTPSLRDKFIISRDNAKNTLYLQMTK 84 usage_00042.pdb 55 STINYTPSLRDKFIISRDNAKNTLYLQMTK 84 usage_00044.pdb 54 IDPTYADSVADRFTTSRDVANNTLYLQMN- 82 usage_00046.pdb 55 GHIDYADSVEGRFTISRDNAKNSLYLQMN- 83 usage_00050.pdb 55 SFTYYPDSVKGRFTISRDNAKNNLYLQMS- 83 usage_00065.pdb 54 DSAFYADSVKGRFTISRDNSKNTLYFEMN- 82 Y s F iSRDn n lYlqM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################