################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:36 2021 # Report_file: c_0588_15.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00212.pdb # 2: usage_00213.pdb # 3: usage_00227.pdb # 4: usage_00228.pdb # 5: usage_00297.pdb # 6: usage_00298.pdb # 7: usage_00444.pdb # # Length: 73 # Identity: 60/ 73 ( 82.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 73 ( 82.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 73 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00212.pdb 1 VVV-----DFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 55 usage_00213.pdb 1 VVV-----DFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 55 usage_00227.pdb 1 ----VVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 56 usage_00228.pdb 1 ---DVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 57 usage_00297.pdb 1 ----VVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 56 usage_00298.pdb 1 ----VVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVR 56 usage_00444.pdb 1 ----VVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELL-KNIKLNKLEHKIIPILSDVR 55 FAGVGPFSIACKNAKKIYAIDINPHAIELL KNIKLNKLEHKIIPILSDVR usage_00212.pdb 56 EVDVKGNRVIN-- 66 usage_00213.pdb 56 EVDVKGNRVIN-- 66 usage_00227.pdb 57 EVDVKGNRVIMN- 68 usage_00228.pdb 58 EVDVKGNRVIMNL 70 usage_00297.pdb 57 EVDVKGNRVIMN- 68 usage_00298.pdb 57 EVDVKGNRVIMN- 68 usage_00444.pdb 56 EVDVKGNRVIMN- 67 EVDVKGNRVI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################