################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:00 2021 # Report_file: c_0303_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00018.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00033.pdb # 5: usage_00035.pdb # 6: usage_00043.pdb # 7: usage_00045.pdb # 8: usage_00055.pdb # 9: usage_00085.pdb # # Length: 97 # Identity: 20/ 97 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 97 ( 34.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 97 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 AGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDG 60 usage_00028.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00029.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00033.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00035.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00043.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00045.pdb 1 --RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDG 58 usage_00055.pdb 1 -KKVLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQLPEISG 59 usage_00085.pdb 1 -KKVLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQLPEISG 59 L V D e n l L a Ye G Al a PD Il D P G usage_00018.pdb 61 YALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLE-- 95 usage_00028.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00029.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00033.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00035.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00043.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00045.pdb 59 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 95 usage_00055.pdb 60 LEVTKWLKEDDDLAHIPVVAVT------AEERIREGG 90 usage_00085.pdb 60 LEVTKWLKEDDDLAHIPVVAVT------DEERIREGG 90 v LK d hIPVv T d E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################