################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:28 2021 # Report_file: c_0699_115.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00591.pdb # 2: usage_00615.pdb # 3: usage_01010.pdb # 4: usage_01011.pdb # 5: usage_01463.pdb # # Length: 66 # Identity: 35/ 66 ( 53.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 66 ( 60.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 66 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00591.pdb 1 KIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLE-MTPHQGEVYTCHVEHPSLKSPI 59 usage_00615.pdb 1 -IEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLE-TVPRSGEVYTCQVEHPSVTSPL 58 usage_01010.pdb 1 SIEVRWF---------VVSTGLIQNGDWTFQTLVMLESG-----EVYTCQVEHPSVTSPL 46 usage_01011.pdb 1 SIEVRWFRNSQEEKAGVVSTGLIQNGDWTFQTLVMLE-TVPRSGEVYTCQVEHPSVTSPL 59 usage_01463.pdb 1 -IKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLE-M-----DVYTCHVEHPSLQNPI 53 I VRWF VvST LI NGDWTFQ LVMLE eVYTC VEHPS sP usage_00591.pdb 60 TVEWSS 65 usage_00615.pdb 59 TVEWR- 63 usage_01010.pdb 47 TVEWR- 51 usage_01011.pdb 60 TVEWR- 64 usage_01463.pdb 54 IVEWR- 58 tVEWr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################