################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:03 2021 # Report_file: c_1319_73.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00088.pdb # 2: usage_00089.pdb # 3: usage_00090.pdb # 4: usage_01235.pdb # 5: usage_01599.pdb # 6: usage_01600.pdb # 7: usage_01626.pdb # 8: usage_01627.pdb # 9: usage_01656.pdb # 10: usage_01657.pdb # 11: usage_01911.pdb # 12: usage_01912.pdb # 13: usage_02305.pdb # # Length: 39 # Identity: 11/ 39 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 39 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 39 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_00089.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_00090.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_01235.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_01599.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_01600.pdb 1 -RQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 38 usage_01626.pdb 1 --QVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 37 usage_01627.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_01656.pdb 1 -RQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 38 usage_01657.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 usage_01911.pdb 1 ERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFV- 38 usage_01912.pdb 1 ERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFV- 38 usage_02305.pdb 1 ERQVALMKEFVDDAVSRGGRLLIGGRSWGNFFEPAIFVD 39 Q E A G L G GN P FV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################