################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:13 2021 # Report_file: c_1159_33.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00304.pdb # 6: usage_00305.pdb # 7: usage_00729.pdb # 8: usage_01683.pdb # 9: usage_01684.pdb # 10: usage_01685.pdb # 11: usage_01686.pdb # 12: usage_01687.pdb # # Length: 29 # Identity: 8/ 29 ( 27.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 29 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 29 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 LVAHANGGFSVDEV-LRNGVKVVRSLK-- 26 usage_00077.pdb 1 LVAHANGGFSVDEV-LRNGVKVVRS---- 24 usage_00078.pdb 1 LVAHANGGFSVDMEVLRNGVKVVRSLK-- 27 usage_00079.pdb 1 LVAHANGGFSVDMEVLRNGVKVVRS---- 25 usage_00304.pdb 1 LVAHANGGFSVDMEVLRNGVKVVRSLK-- 27 usage_00305.pdb 1 LVAHANGGFSVDMEVLRNGVKVVRSLK-- 27 usage_00729.pdb 1 LVAHADGTYAVDMQVLRNGTKVVRS---- 25 usage_01683.pdb 1 LVAHANGGFSVDMEVLRNGVKVVRSLK-- 27 usage_01684.pdb 1 LVAHANGGFSVDME------VRS----LK 19 usage_01685.pdb 1 LVAHANGGFSVDME------VRS----LK 19 usage_01686.pdb 1 LVAHANGGFSVDME------VVVRSLK-- 21 usage_01687.pdb 1 LVAHANGGFSVDME------VRS----LK 19 LVAHAnGgfsVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################