################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:25 2021 # Report_file: c_1054_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00118.pdb # 6: usage_00119.pdb # 7: usage_00120.pdb # 8: usage_00121.pdb # 9: usage_00231.pdb # 10: usage_00486.pdb # 11: usage_00519.pdb # 12: usage_00567.pdb # # Length: 56 # Identity: 1/ 56 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 56 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 56 ( 51.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00105.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00116.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00117.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00118.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00119.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00120.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00121.pdb 1 ---IYEVIARLFDNSEFSEYKKG------YGP-EMVTGLAKVNGLLVGVIANVQG- 45 usage_00231.pdb 1 ----HSVIEHVLDDAEFFETQPL------FAP-NILTGFGRVEGRPVGI------- 38 usage_00486.pdb 1 ----KELIHKLADEGDFYEIQEE------FAK-NIITGFIRLEGRTVGVVANQPL- 44 usage_00519.pdb 1 QSAAKKFYTSLFG-WGYDDNP-----------GVYSMATL--NG-EAVAAIA---P 38 usage_00567.pdb 1 --TTLDYIPYIFDS--FMELH--GDRNFRDDP-AMIGGIGFLNGRAVTVIGQ---- 45 i d f e g G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################