################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:48 2021 # Report_file: c_0378_70.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00009.pdb # 2: usage_00018.pdb # 3: usage_00038.pdb # 4: usage_00073.pdb # 5: usage_00183.pdb # 6: usage_00346.pdb # 7: usage_00347.pdb # 8: usage_00441.pdb # 9: usage_00442.pdb # 10: usage_00536.pdb # 11: usage_00537.pdb # 12: usage_00554.pdb # 13: usage_00936.pdb # # Length: 110 # Identity: 5/110 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/110 ( 8.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/110 ( 59.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --PSLSAQPGPTVLAG-ENVTLSCSSRSSYDMYHLSREG--EAHE-R-RLPAGP----KV 49 usage_00018.pdb 1 -KPTLWAEPGSVIIQG-SPVTLRCQGSLQAEEYHLYR-E--NKAS-W-VRRIQ-----EP 48 usage_00038.pdb 1 --PSLSAQPGPTVLAG-ESVTLSCSSRSSYDMYHLSREG--EAHE-R-RFSAGP----KV 49 usage_00073.pdb 1 DTPTLSVHPGPEVISG-EKVTFYCRLDTATSMFLLLKEGRSS-HV-Q-RGYG------K- 49 usage_00183.pdb 1 ----------PTVLAG-ESVTLSCSSRSSYDMYHLSREG--EAHE-C-RFSAGP----KV 41 usage_00346.pdb 1 ---SLSVQPGPVMAPG-ESLTLQCVSDVGYDRFVLYKEG--ERDL-R-QLPGRQ----PQ 48 usage_00347.pdb 1 ---SLSVQPGPVMAPG-ESLTLQCVSDVGYDRFVLYKEG--ERDL-R-QLPGRQ----PQ 48 usage_00441.pdb 1 -KPSLSAQ----------SVTLSCSSRSSYDMYHLSREG--GAHE-R-RLPAVR----KV 41 usage_00442.pdb 1 EKPSLSAQPGPKVQAG-ESVTLSCSSRSSYDMYHLSREG-------R-RLPAVR----KV 47 usage_00536.pdb 1 ---WLGAQPATVVTPG-VNVTLRCRAPQPAWRFGLFKPG--EIAPLL-FRDVS-----S- 47 usage_00537.pdb 1 -RPSLVALP-------GANVSLRCAGRLRNMSFVLYREG--VAAP-LQYRHSA-----Q- 43 usage_00554.pdb 1 --PSLSAQPGPTVLAG-ESVTLSCSSRSSYDMYHLSREG--EAHE-R-RFSAGPKVNGT- 52 usage_00936.pdb 1 -KPSLSA----------GDVTLQCQTRYGFDQFALYKEG--ER-W-Y-RASF-------- 36 tl C L g usage_00009.pdb 50 NGTF-QADFPLGPATH--GGTYRCFGSFHDSPY--EWSK-SSDPLLVSVT 93 usage_00018.pdb 49 ---GKNGQFPIPSITWEHAGRYHCQYYSHN-----HSSE-YSDPLELVVT 89 usage_00038.pdb 50 NGTF-QADFPLGPATH--GGTYRCFGSFRDSPY--EWSN----------- 83 usage_00073.pdb 50 ---V-QAEFPLGPVTTAHRGTYRCFGSYN--NH--AWSF----------- 80 usage_00183.pdb 42 NGTF-QADFPLGPATH--GGTYRCFGSFRDSPY--EWSN-SSDPLLVSVI 85 usage_00346.pdb 49 AGLS-QANFTLGPVSRSYGGQYRCYGAHNLSSE--CS------------- 82 usage_00347.pdb 49 AGLS-QANFTLGPVSRSYGGQYRCYGAHNLSSE--CS------------- 82 usage_00441.pdb 42 NRTF-QADFPL-------GGTYRCFGSFRHSPY--ELS------------ 69 usage_00442.pdb 48 NRTF-QADFPL-------GGTYRCFGSFRHSPY--EWS------------ 75 usage_00536.pdb 48 ---E-LAEFFLEEVTPAQGGIYRCCYRRPDWG-PGVWSQ-PSDVLELLVT 91 usage_00537.pdb 44 ---P-WADFTLLGA--RAPGTYSCYYHTPSA-P--YVLSQ---------- 74 usage_00554.pdb 53 ---F-QADFPLGPATH--GGTYRCFGSFRDSPY--EWSN----------- 83 usage_00936.pdb 37 ---P-IITVTA--A---HSGTYRCYSFSSRDPY--LWSA-PSDPLEL--- 71 f G Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################