################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:18 2021 # Report_file: c_0648_41.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00034.pdb # 2: usage_00126.pdb # 3: usage_00321.pdb # 4: usage_00322.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 61 ( 13.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 61 ( 44.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 NWTPIGRFG-F----TNQDAALEYYVKSIKARYIRLTIP-DDGG---NSTVAAIR----- 46 usage_00126.pdb 1 N-----WTTVYSTTTGD-GAIDDITFAATNAKFVRVYAT-----TRATAYGYSL-W---- 44 usage_00321.pdb 1 -NWKPVTNL-KAPAQLKAGEMNHFSFDKVETYAIRIRMVKAD-----NKRGTSI-TEVQI 52 usage_00322.pdb 1 -NWKPVTNL-KAPAQLKAGEMNHFSFDKVETYAIRIRMVKAD-----NKRGTSI-TEVQI 52 g f iR n g si usage_00034.pdb - usage_00126.pdb - usage_00321.pdb 53 F 53 usage_00322.pdb 53 F 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################