################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:55 2021 # Report_file: c_0516_25.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00081.pdb # 2: usage_00082.pdb # 3: usage_00187.pdb # 4: usage_00188.pdb # 5: usage_00189.pdb # # Length: 88 # Identity: 51/ 88 ( 58.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 88 ( 58.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 88 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 VTEGEKSYHEPLVHPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMVEIDKKVIE 60 usage_00082.pdb 1 -------------HPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMVEIDKKVIE 47 usage_00187.pdb 1 VTEGEKSYHEPLVHPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMVEIDKKVIE 60 usage_00188.pdb 1 VTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVREVLQHD-VDEVIMVEIDEDVIM 59 usage_00189.pdb 1 VTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVREVLQHD-VDEVIMVEIDEDVIM 59 HPAMLAHP P RVL IGGGDGG REVL H V EVIMVEID VI usage_00081.pdb 61 ISAKYIGIDGGILEKMLSDKHEKGKLII 88 usage_00082.pdb 48 ISAKYIGIDGGILEKMLSDKHEKGKLII 75 usage_00187.pdb 61 ISAKYIGIDGGILEKMLSDKHEKGKLII 88 usage_00188.pdb 60 VSKDLIKIDNGLLEAMLNGKHEKAKLTI 87 usage_00189.pdb 60 VSKDLIKIDNGLLEAMLNGKHEKAKLTI 87 S I ID G LE ML KHEK KL I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################