################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:19:59 2021 # Report_file: c_0119_4.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00009.pdb # 2: usage_00067.pdb # 3: usage_00085.pdb # 4: usage_00086.pdb # 5: usage_00087.pdb # 6: usage_00088.pdb # 7: usage_00102.pdb # 8: usage_00131.pdb # 9: usage_00132.pdb # 10: usage_00167.pdb # 11: usage_00168.pdb # 12: usage_00181.pdb # 13: usage_00186.pdb # 14: usage_00187.pdb # 15: usage_00242.pdb # 16: usage_00243.pdb # 17: usage_00244.pdb # 18: usage_00278.pdb # 19: usage_00279.pdb # 20: usage_00280.pdb # # Length: 109 # Identity: 50/109 ( 45.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/109 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/109 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 ---MTQSPKFMSTSVGDRVTITCKASQDVSTAVVWYQQKPGQSPKLLIYWASTRHIGVPD 57 usage_00067.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQVG-TALAWYQQKPGQSPKLLIYWASTRHTGVPD 59 usage_00085.pdb 1 -IVLTQSPKSMSVSVGERVTLSCKASENVDTYVFWFQQKPDQSPKLLLYGPSNRYTGVPD 59 usage_00086.pdb 1 -IVLTQSPKSMSVSVGERVTLSCKASENVDTYVFWFQQKPDQSPKLLLYGPSNRYTGVPD 59 usage_00087.pdb 1 -IVLTQSPKSMSVSVGERVTLSCKASENVDTYVFWFQQKPDQSPKLLLYGPSNRYTGVPD 59 usage_00088.pdb 1 -IVLTQSPKSMSVSVGERVTLSCKASENVDTYVFWFQQKPDQSPKLLLYGPSNRYTGVPD 59 usage_00102.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPD 60 usage_00131.pdb 1 -LVMTQSPKFMSTSVGDRVSVTCKASQNVGTHVAWYQQKPGQSPKTLIYSASYRYSGVPD 59 usage_00132.pdb 1 -LVMTQSPKFMSTSVGDRVSVTCKASQNVGTHVAWYQQKPGQSPKTLIYSASYRYSGVPD 59 usage_00167.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD 60 usage_00168.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVRTSVAWYQQKPGQSPKALIYLASNRHTGVPD 60 usage_00181.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLISWASTRHTGVPD 60 usage_00186.pdb 1 DILMTQSQKFLSTSVGDRVSVTCKASQNVGTNVAWYQKKPGQSPKPLMYSASYRYSGVPD 60 usage_00187.pdb 1 DILMTQSQKFLSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKPLMYSASYRYSGVPD 60 usage_00242.pdb 1 DIVMTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSASNRYSGVPD 60 usage_00243.pdb 1 DIVMTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSASNRYSGVPD 60 usage_00244.pdb 1 DIVMTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSASNRYSGVPD 60 usage_00278.pdb 1 -NVMTQSPSFMSTSVGDRVSVTCAASQNVGTNVAWYQQKPGQPPKALIYSTSYRYSGVPD 59 usage_00279.pdb 1 DNVMTQSPSFMSTSVGDRVSVTCAASQNVGTNVAWYQQKPGQPPKALIYSTSYRYSGVPD 60 usage_00280.pdb 1 -NVMTQSPSFMSTSVGDRVSVTCAASQNVGTNVAWYQQKPGQPPKALIYSTSYRYSGVPD 59 TQS S SVG RV C AS v T v W Q KP Q PK L y S R GVPD usage_00009.pdb 58 RFAGSGSGTDYTLTISSVQAEDLALYYCQQHYSPPWTFGGGTKLEI--- 103 usage_00067.pdb 60 RFTGSGSGTDFTLTISNVQSEDLSDYFCQQYSSYPTFGGG-TKLEI--- 104 usage_00085.pdb 60 RFTGSGSTTDFTLTISSVQAEDLADYHCGQSYSYPYTFGGGTKLEIKRA 108 usage_00086.pdb 60 RFTGSGSTTDFTLTISSVQAEDLADYHCGQSYSYPYTFGGGTKLEIKRA 108 usage_00087.pdb 60 RFTGSGSTTDFTLTISSVQAEDLADYHCGQSYSYPYTFGGGTKLEIKRA 108 usage_00088.pdb 60 RFTGSGSTTDFTLTISSVQAEDLADYHCGQSYSYPYTFGGGTKLEIKRA 108 usage_00102.pdb 61 RFTGSGSGTDYTLTISSVQAEDLALYYCQQHYSTPYTFGGGTKLEIKRT 109 usage_00131.pdb 60 RFTGSGSGTDFTLTIRDVQSEDAAEYFCQQYNLFPVTFGGGTKLEI--- 105 usage_00132.pdb 60 RFTGSGSGTDFTLTIRDVQSEDAAEYFCQQYNLFPVTFGGGTKLEI--- 105 usage_00167.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEI--- 106 usage_00168.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWTYPYTFGGGTKLEIKRA 109 usage_00181.pdb 61 RFTGSGSGTDYTLTISSVQAEDLALYYCQQHYTTPLTFGAGTKLEL--- 106 usage_00186.pdb 61 RFTGSGSGTDFTLTISNVQSEDLAEYFCQQFNRYPLTFGSGTKLELKRA 109 usage_00187.pdb 61 RFTGSGSGTDFTLTISNVQSEDLAEYFCQQFNRYPLTFGSGTKLEL--- 106 usage_00242.pdb 61 RFTGSASGTDFTLTITNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRA 109 usage_00243.pdb 61 RFTGSASGTDFTLTITNVQSEDLAEYFCQQYNSYPYTFGGGTKLEI--- 106 usage_00244.pdb 61 RFTGSASGTDFTLTITNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRA 109 usage_00278.pdb 60 RFTGSGSGTDFTLTISNVNSEDLAEYFCQQYNIYPVTFGGGTKLEIKRT 108 usage_00279.pdb 61 RFTGSGSGTDFTLTISNVNSEDLAEYFCQQYNIYPVTFGGGTKLEIKRT 109 usage_00280.pdb 60 RFTGSGSGTDFTLTISNVNSEDLAEYFCQQYNIYPVTFGGGTKLEIKRT 108 RFtGS S TD TLTI V ED a Y C Q P tfG TKLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################