################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:11 2021 # Report_file: c_1430_74.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00118.pdb # 2: usage_00142.pdb # 3: usage_00229.pdb # 4: usage_00684.pdb # 5: usage_00826.pdb # # Length: 86 # Identity: 8/ 86 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 86 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 86 ( 38.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 YSQLLGLHEQLRKEY--GAN-V-LPAFPPKK-LFSLTP-A--EVEQRREQLEKYMQAVRQ 52 usage_00142.pdb 1 YREFVWLRKQLQRNA--GL-VP-VPELPGKSTFFGTSDE---FIEKRRQGLQHFLEKVLQ 53 usage_00229.pdb 1 YSEFHALHKRIKKLY--K----V-PDFPSKR---LPNW-RTRGLEQRRQGLEAYIQGILY 49 usage_00684.pdb 1 YSQLLGLHEQLRKEY--GAN-V-LPAFPPKK-LFSLTP-A--EVEQRREQLEKYMQAVRQ 52 usage_00826.pdb 1 YSDFHDLHEKLVAERKID----KNLLPPKKI-IGKNSR-S--LVEKREKDLEVYLQKLLA 52 Ys Lh l p P K E Rr Le y q usage_00118.pdb 53 DP----LLGSSETFNSFLRRAQQEA- 73 usage_00142.pdb 54 SV----VLLSDSQLHLFLQS------ 69 usage_00229.pdb 50 LNQEV--------PKELLEF-L---- 62 usage_00684.pdb 53 DP----LLGSSETFNSFLRRAQQETQ 74 usage_00826.pdb 53 AF---PG-VTPRVLAHFLH------- 67 fL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################