################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:04 2021 # Report_file: c_1311_23.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00251.pdb # 4: usage_00287.pdb # 5: usage_00288.pdb # 6: usage_00289.pdb # 7: usage_00290.pdb # 8: usage_00315.pdb # 9: usage_00349.pdb # 10: usage_00358.pdb # # Length: 39 # Identity: 7/ 39 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 39 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 39 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 DPQALANMDILGTHLYGTQVSQFPYPLFKQKGAGKDLWM 39 usage_00077.pdb 1 DPQALANMDILGTHLYGTQVSQFPYPLFKQKGAGKDLWM 39 usage_00251.pdb 1 DPQALANMDILGTHLYGTQVSQFPYPLFKQKGAGKDLWM 39 usage_00287.pdb 1 DPQALANMDILGAHTYGTQIKDFAYPLFKQKGAGKELWM 39 usage_00288.pdb 1 DPQALANMDILGAHTYGTQIKDFAYPLFKQKGAGKELWM 39 usage_00289.pdb 1 DPQALANMDILGAHTYGTQIKDFAYPLFKQKGAGKELWM 39 usage_00290.pdb 1 DPQALANMDILGAHTYGTQIKDFAYPLFKQKGAGKELWM 39 usage_00315.pdb 1 DQELWKVVDVIGAHY--PGT--YTVWNAKM-SG-KKLWS 33 usage_00349.pdb 1 DQELWKVVDVIGAHY--PGT--YTVWNAKM-SG-KKLWS 33 usage_00358.pdb 1 DPQALANLDILGAHFYGTTVNNMPYPLFEQKGAGKELWM 39 D D G H k K LW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################