################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:54 2021 # Report_file: c_1122_12.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00052.pdb # 4: usage_00059.pdb # 5: usage_00119.pdb # 6: usage_00123.pdb # 7: usage_00131.pdb # 8: usage_00165.pdb # 9: usage_00195.pdb # 10: usage_00261.pdb # 11: usage_00371.pdb # 12: usage_00397.pdb # # Length: 93 # Identity: 39/ 93 ( 41.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 93 ( 60.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 93 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 SHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 60 usage_00044.pdb 1 ---SAQIKAHGKKVANALIEAVNHIDDISGALSKLSDLHAQKLRVDPVNFKLLGQCFLVV 57 usage_00052.pdb 1 ---SAQVKGHGAKVAAALTKAVEHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVT 57 usage_00059.pdb 1 SPGSAQVKAHGKKVADALTTAVAHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVT 60 usage_00119.pdb 1 SPGSDQVRGHGKKVLGALGNAVKNVDNLSQAMAELSNLHAYNLRVDPVNFKLLSQCIQVV 60 usage_00123.pdb 1 ----AQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 56 usage_00131.pdb 1 ----AQVKAHGKKVGDALTLAVGHLDDLPGALSDLSNLHAHKLRVDPVNFKLLSHCLLST 56 usage_00165.pdb 1 ----AQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 56 usage_00195.pdb 1 -----QVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 55 usage_00261.pdb 1 ----AQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 56 usage_00371.pdb 1 ---SAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVT 57 usage_00397.pdb 1 ----AQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVT 56 Qvk HG KV AL AV h Dd als LS LHA kLRVDPVNFKLLs lv usage_00043.pdb 61 LAAHLPAEFTPAVHASLDKFLASVSTVLT---- 89 usage_00044.pdb 58 VAIHHPSALTPEVHASLDKFLCAVGAVL----- 85 usage_00052.pdb 58 LASHLPSDFTPAVHASLDKFLANVSTVLT---- 86 usage_00059.pdb 61 LACHHPTEFTPAVHASLDKFFAAVSTVLTS--- 90 usage_00119.pdb 61 LAVHMGKDYTPEVHAAFDKFLSAVSAVLA---- 89 usage_00123.pdb 57 LAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 89 usage_00131.pdb 57 LAVHLPNDFTPAVHASLDKFLSSVSTVL----- 84 usage_00165.pdb 57 LAAHLPAEFTPAVHASLDKFLASVSTVLT---- 85 usage_00195.pdb 56 LAAHLPAEFTPAVHASLDKFLASVSTVLTS--- 85 usage_00261.pdb 57 LAAHLPAEFTPAVHASLDKFLASVSTVLTS--- 86 usage_00371.pdb 58 LACHLPNDFTPAVHASLDKFLANVSTVLTS--- 87 usage_00397.pdb 57 LAAHLPAEFTPAVHASLDKFLASVSTVLTS--- 86 lA H p TP VHAslDKFl Vs VL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################