################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:03:41 2021 # Report_file: c_0654_18.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00160.pdb # 2: usage_00161.pdb # 3: usage_00162.pdb # 4: usage_00163.pdb # 5: usage_00223.pdb # 6: usage_00224.pdb # 7: usage_00225.pdb # 8: usage_00381.pdb # 9: usage_00433.pdb # 10: usage_00440.pdb # 11: usage_00532.pdb # 12: usage_00533.pdb # 13: usage_00573.pdb # 14: usage_00586.pdb # 15: usage_00655.pdb # 16: usage_00664.pdb # 17: usage_00665.pdb # 18: usage_00733.pdb # # Length: 80 # Identity: 5/ 80 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 80 ( 15.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 80 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00160.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00161.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00162.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00163.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00223.pdb 1 QVSLRTRFGQH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00224.pdb 1 QVSLRTRFGQH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00225.pdb 1 QVSLRTRFGQH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00381.pdb 1 TVALVTPDGQQ---FCGGTLAAPNKVVTAAHCTVG----------SQPADINVVSGRTVM 47 usage_00433.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00440.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00532.pdb 1 TVSLRNRQGQH---FCGGSLVKEQWILTARQCFSSC--------HMPLTGYEVWLGTLFQ 49 usage_00533.pdb 1 TVSLRNRQGQH---FCGGSLVKEQWILTARQCFSSC--------HMPLTGYEVWLGTLFQ 49 usage_00573.pdb 1 QVS-ITYEGVH---VCGGSLVSEQWVLSAAHCFPS---------EHHKEAYEVKLGAHQL 47 usage_00586.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00655.pdb 1 LIVVEDTS---DKWFGSGALLSASWILTAAHVLRS-QRRDTTVIPVSKEHVTVYLGLHDV 56 usage_00664.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00665.pdb 1 QVSLRTRFGMH---FCGGTLISPEWVLTAAHCLEK---------SPRPSSYKVILGAHQE 48 usage_00733.pdb 1 QVS-ITYEGVH---VCGGSLVSEQWVLSAAHCFPS---------EHHKEAYEVKLGAHQL 47 v cgG L w l A c V lG usage_00160.pdb 49 VNLEP-HVQEIE-------- 59 usage_00161.pdb 49 VNLEP-HVQEIE-------- 59 usage_00162.pdb 49 VNLEP-HVQEIE-------- 59 usage_00163.pdb 49 VNLEP-HVQEIE-------- 59 usage_00223.pdb 49 VNLEP-HVQEIE-------- 59 usage_00224.pdb 49 VNLEP-HVQEIE-------- 59 usage_00225.pdb 49 VNLEP-HVQEIE-------- 59 usage_00381.pdb 48 -SS-N-EGTVSKVTN----- 59 usage_00433.pdb 49 VNLEP-HVQEIE-------- 59 usage_00440.pdb 49 VNLEP-HVQEIE-------- 59 usage_00532.pdb 50 N---EPSLQRVP-------- 58 usage_00533.pdb 50 N---EPSLQRVP-------- 58 usage_00573.pdb 48 DSYSE-DAKVST-------- 58 usage_00586.pdb 49 VNLEP-HVQEIE-------- 59 usage_00655.pdb 57 ---------------NSSAA 61 usage_00664.pdb 49 VNLEP-HVQEIE-------- 59 usage_00665.pdb 49 VNLEP-HVQEIE-------- 59 usage_00733.pdb 48 DSYSE-DAKVST-------- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################