################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:59 2021 # Report_file: c_0518_22.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00006.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00088.pdb # 10: usage_00131.pdb # 11: usage_00134.pdb # 12: usage_00247.pdb # 13: usage_00341.pdb # 14: usage_00370.pdb # 15: usage_00371.pdb # 16: usage_00372.pdb # 17: usage_00373.pdb # 18: usage_00374.pdb # 19: usage_00375.pdb # 20: usage_00376.pdb # 21: usage_00400.pdb # 22: usage_00544.pdb # # Length: 129 # Identity: 18/129 ( 14.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/129 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/129 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00002.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00003.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00006.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00067.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00068.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00069.pdb 1 --NDVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 52 usage_00070.pdb 1 --NDVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 52 usage_00088.pdb 1 ------CVKQLYKLKKANRSLKIMLSIGGWTW-------STNFPAAASTEATRATFAKTA 47 usage_00131.pdb 1 DAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSC 60 usage_00134.pdb 1 ---DLRDYEALNGLKDKNTELKTLLAIGGWKF----G--PAPFSAMVSTPQNRQIFIQSV 51 usage_00247.pdb 1 --NDETLYQEFNGLKKMNPKLKTLLAIGGWNF----G--TQKFTDMVATANNRQTFVNSA 52 usage_00341.pdb 1 ---DLRDYEALNGLKDKNTELKTLLAIGGWKF----G--PAPFSAMVSTPQNRQIFIQSV 51 usage_00370.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00371.pdb 1 --NDVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 52 usage_00372.pdb 1 --NDVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 52 usage_00373.pdb 1 --NDVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 52 usage_00374.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00375.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00376.pdb 1 ---DVTLYQAFNGLKNKNSQLKTLLAIGGWNF----G--TAPFTAMVSTPENRQTFITSV 51 usage_00400.pdb 1 ---DETLYQEFNGLKKMNPKLKTLLAIGGWNF----G--TQKFTDMVATANNRQTFVNSA 51 usage_00544.pdb 1 ---DETLYQEFNGLKKMNPKLKTLLAIGGWNF----G--TQKFTDMVATANNRQTFVNSA 51 LK N Lk l IGGW f v T R F s usage_00001.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00002.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00003.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00006.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00067.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00068.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00069.pdb 53 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 107 usage_00070.pdb 53 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 107 usage_00088.pdb 48 VEFMKDWGFDGIDVDWEYPA-----SETDANNMVLLLQRVRQELDSYSATYAN---GYHF 99 usage_00131.pdb 61 VRIMKDYGFDGVDIDWEYPQ-----A-AEVDGFIAALQEIRTLLNQQTITDGRQALPY-- 112 usage_00134.pdb 52 IRFLRQYNFDGLNLDWQYPGSRGSPP-KDKHLFSVLVKEMRKAFEEESVEKDI---PRL- 106 usage_00247.pdb 53 IRFLRKYSFDGLDLDWEYPGSQGSPA-VDKERFTTLVQDLANAFQQEAQTSGK---ERL- 107 usage_00341.pdb 52 IRFLRQYNFDGLNLDWQYPGSRGSPP-KDKHLFSVLVKEMRKAFEEESVEKDI---PRL- 106 usage_00370.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00371.pdb 53 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 107 usage_00372.pdb 53 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 107 usage_00373.pdb 53 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 107 usage_00374.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00375.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00376.pdb 52 IKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVLVQEMREAFEQEAKQINK---PRL- 106 usage_00400.pdb 52 IRFLRKYSFDGLDLDWEYPGSQGSPA-VDKERFTTLVQDLANAFQQEAQTSGK---ERL- 106 usage_00544.pdb 52 IRFLRKYSFDGLDLDWEYPGSQGSPA-VDKERFTTLVQDLANAFQQEAQTSGK---ERL- 106 f y FDG DW YP d f l usage_00001.pdb 107 MVTAAVAAG 115 usage_00002.pdb 107 MVTAAVAAG 115 usage_00003.pdb 107 MVTAAVAAG 115 usage_00006.pdb 107 MVTAAVAAG 115 usage_00067.pdb 107 MVTAAVAAG 115 usage_00068.pdb 107 MVTAAVAAG 115 usage_00069.pdb 108 MVTAAVAAG 116 usage_00070.pdb 108 MVTAAVAAG 116 usage_00088.pdb 100 QLS------ 102 usage_00131.pdb 113 QLTIAGAGG 121 usage_00134.pdb 107 LLTSTGAGI 115 usage_00247.pdb 108 LLSAAV--- 113 usage_00341.pdb 107 LLTSTGAGI 115 usage_00370.pdb 107 MVTAAVAAG 115 usage_00371.pdb 108 MVTAAVAAG 116 usage_00372.pdb 108 MVTAAVAAG 116 usage_00373.pdb 108 MVTAAVAAG 116 usage_00374.pdb 107 MVTAAVAAG 115 usage_00375.pdb 107 MVTAAVAAG 115 usage_00376.pdb 107 MVTAAVAAG 115 usage_00400.pdb 107 LLSAAVPAG 115 usage_00544.pdb 107 LLSAAVPAG 115 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################