################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:09 2021 # Report_file: c_1307_160.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00135.pdb # 2: usage_00517.pdb # 3: usage_00737.pdb # 4: usage_01365.pdb # 5: usage_01851.pdb # 6: usage_01906.pdb # # Length: 48 # Identity: 1/ 48 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 48 ( 20.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 48 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00135.pdb 1 SPTLRQRICDAAIQLMENIKYVNAGTVEFLVS--GDEFFFIEVNPR-- 44 usage_00517.pdb 1 -EAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPR-- 45 usage_00737.pdb 1 TPELRRYIGERCAKACVDIGYRGAGTFEFLFE--NGEFYFIEMNTR-- 44 usage_01365.pdb 1 SETEEKKLQALCLRAFQAVGAEGWGRIDAMQDE-QGNFWLLEVNTV-- 45 usage_01851.pdb 1 TEEVRRDIGSRCANACVEIGYRGAGTFEFLYE--NGEFYFIEMNTR-- 44 usage_01906.pdb 1 -QAVRTALIGAALQLAQEVKYRCLGTFEFLVT--PGGDFY-FIEANPR 44 r y Gt e l g f e n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################