################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:29:01 2021 # Report_file: c_0688_40.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00022.pdb # 2: usage_00024.pdb # 3: usage_00026.pdb # 4: usage_00028.pdb # 5: usage_00031.pdb # 6: usage_00032.pdb # 7: usage_00163.pdb # 8: usage_00166.pdb # 9: usage_00270.pdb # 10: usage_00271.pdb # 11: usage_00273.pdb # 12: usage_00275.pdb # 13: usage_00276.pdb # 14: usage_00331.pdb # 15: usage_00398.pdb # 16: usage_00399.pdb # 17: usage_00401.pdb # 18: usage_00402.pdb # 19: usage_00428.pdb # 20: usage_00452.pdb # # Length: 56 # Identity: 3/ 56 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 56 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 56 ( 41.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 44 usage_00024.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 42 usage_00026.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 42 usage_00028.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 42 usage_00031.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 45 usage_00032.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 45 usage_00163.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 43 usage_00166.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 45 usage_00270.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 44 usage_00271.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 45 usage_00273.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 42 usage_00275.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 44 usage_00276.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 44 usage_00331.pdb 1 -NELFYRN-KAAWLVGKLIT-PSGTLPFLLPIHQTDD----G--ELFIDTCLTT-- 45 usage_00398.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNE-QGSYVVAMETFT-NL 44 usage_00399.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLN------S--YVVAMETFT-NL 37 usage_00401.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 43 usage_00402.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 43 usage_00428.pdb 1 EC-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT--- 43 usage_00452.pdb 1 -C-LTYLDNGVVFVGS--RLG------DSQLVKLNVDSNEQGS-YVVAMETFT-NL 44 c LtYld gvvfvgs rl dsqlvkln yvvametfT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################