################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:29 2021 # Report_file: c_0636_8.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00081.pdb # 7: usage_00082.pdb # 8: usage_00174.pdb # 9: usage_00175.pdb # 10: usage_00179.pdb # # Length: 112 # Identity: 22/112 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/112 ( 22.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/112 ( 33.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TEEEKIRVDILENQAMDVSNQLARVCYSPDFEKLKPEYLEELPTMMQHFSQFLGKRPWFV 60 usage_00002.pdb 1 -EEEKIRVDILENQAMDVSNQLARVCYSPDFEKLKPEYLEELPTMMQHFSQFLGKRPWFV 59 usage_00003.pdb 1 TEEEKIRVDILENQAMDVSNQLARVCYSPDFEKLKPEYLEELPTMMQHFSQFLGKRPWFV 60 usage_00004.pdb 1 TEEEKIRVDILENQAMDVSNQLARVCYSPDFEKLKPEYLEELPTMMQHFSQFLGKRPWFV 60 usage_00005.pdb 1 TEEEKIRVDILENQAMDVSNQLARVCYSPDFEKLKPEYLEELPTMMQHFSQFLGKRPWFV 60 usage_00081.pdb 1 SEKEQIREDILENQFMDSRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYSQFLGKQPWFL 60 usage_00082.pdb 1 SEKEQIREDILENQFMDSRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYSQFLGKQPWFL 60 usage_00174.pdb 1 -DHEEIRISMAEQQTEDMMAAMIRVCYDANCDKLKPDYLKSLPDCLKLMSKFVGEHAFIA 59 usage_00175.pdb 1 -DHEEIRISMAEQQTEDMMAAMIRV------------YLKSLPDCLKLMSKFVGEHAFIA 47 usage_00179.pdb 1 ----------------------------------KPEFLKTIPEKMKLYSEFLGKRPWFA 26 yL lP S F G usage_00001.pdb 61 GDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00002.pdb 60 GDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEGLEKISAYMKS- 110 usage_00003.pdb 61 GDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00004.pdb 61 GDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00005.pdb 61 GDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00081.pdb 61 GDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00082.pdb 61 GDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEGLEKISAYMKS- 111 usage_00174.pdb 60 GANISYVDFNLYEYLCHVKVMVPEVFGQFENLKRYVERMESLPRVSDYIKKQ 111 usage_00175.pdb 48 GANISYVDFNLYEYLCHVKVMVPEVFGQFENLKRYVERMESLPRVSDYIKK- 98 usage_00179.pdb 27 GDKVTYVDFLAYDILDQYHIFEPKCLDAFPNLKDFLARFEGLKKISAYMKS- 77 G i VDF Y L P F NLK R E L S Y K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################