################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:34 2021 # Report_file: c_0194_56.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00110.pdb # 2: usage_00113.pdb # 3: usage_00114.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00142.pdb # 7: usage_00143.pdb # # Length: 205 # Identity: 5/205 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/205 ( 5.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/205 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00110.pdb 1 --------AQPV----ADVVDVIQLPAF-LARQTDLVEAMAKT---G-AVINVKKPQFVS 43 usage_00113.pdb 1 SEQMTIDTAGRLKEICAKLNVPFIYKSSYDK-MDEGLRILGEVKRQLGLPVLTDV---HS 56 usage_00114.pdb 1 ---------EQV----ASVVDVLQTPAF-LCRQTDFIHACARS---G-KPVNIKKGQFLA 42 usage_00115.pdb 1 SEQMTIDTAGRLKEICAKLNVPFIYKSSY---MDEGLRILGEVKRQLGLPVLTDV---HS 54 usage_00116.pdb 1 --------IEQV----ASVVDVLQTPAF-LCRQTDFIHACARS---G-KPVNIKKGQFLA 43 usage_00142.pdb 1 --------IEQV----ASVVDVLQTPAF-LCRQTDFIHACARS---G-KPVNIKKGQFLA 43 usage_00143.pdb 1 --------IEQV----ASVVDVLQTPAF-LCRQTDFIHACARS---G-KPVNIKKGQFLA 43 A pv usage_00110.pdb 44 PGQMGNIVDKF-KEGG------NEKVILCDRGAN--FGYDNLVVDMLGFSIMKKVSGNSP 94 usage_00113.pdb 57 IDEIEQVAS-VV-------------DVLQTP-AFLC-------RQTDFIHACAR-S-GKP 92 usage_00114.pdb 43 PHDMKNVIDKA-REAAREAGLSEDRFMACERGVS--FGYNNLVSDMRSLAIMRE-T-SAP 97 usage_00115.pdb 55 IDEIEQVAS-VV-------------DVLQTP-AFLC-------RQTDFIHACAR-S-GKP 90 usage_00116.pdb 44 PHDMKNVIDKA-REAAREAGLSEDRFMACERGVS--FGYNNLVSDMRSLAIMRE-T-SAP 98 usage_00142.pdb 44 PHDMKNVIDKA-RDAAREAGLSEDRFMACERGVS--FGYNNLVSDMRSLAIMRE-T-NAP 98 usage_00143.pdb 44 PHDMKNVIDKA-RDAAREAGLSEDRFMACERGVS--FGYNNLVSDMRSLAIMRE-T-NAP 98 v P usage_00110.pdb 95 VIFDV-T--HALQ-----RAQVAELARAGMAVGL----AGLFIEA-HPDPEHAKCDGPSA 141 usage_00113.pdb 93 VNIKKGQFL----APHDMKNVIDKAREAAREAGLSEDRFMACERGVSFG--------YNN 140 usage_00114.pdb 98 VVFDA-T--HSVQLP-GQREFVPVLARAAVATGV----AGLFMET-HPNPAEAKSDGPNA 148 usage_00115.pdb 91 VNIKKGQFL----APHDMKNVIDKAREAAREAGLSEDRFMACERGVSFG--------YNN 138 usage_00116.pdb 99 VVFDA-T--HSVQLP-GQREFVPVLARAAVATGV----AGLFMET-HPNPAEAKSDGPNA 149 usage_00142.pdb 99 VVFDA-T--HSVQLP-GQREFVPVLARAAVATGV----AGLFMET-HPNPAEAKSDGPNA 149 usage_00143.pdb 99 VVFDA-T--HSVQLPGGQREFVPVLARAAVATGV----AGLFMET-HPNPAEAKSDGPNA 150 V Aa G n usage_00110.pdb 142 --LPLAKLEPFLKQMKAIDDLVKGF 164 usage_00113.pdb 141 LVS-DMRSLAIMRETS--------- 155 usage_00114.pdb 149 --VPLNRMGALLETLVTLDQAV--- 168 usage_00115.pdb 139 LVS-DMRSLAIMRETS--------- 153 usage_00116.pdb 150 --VPLNRMGALLETLVTLDQAV--- 169 usage_00142.pdb 150 --VPLNRMGALLETLVTLDQAV--- 169 usage_00143.pdb 151 --VPLNRMGALLETLVTLDQAV--- 170 r a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################