################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:07 2021 # Report_file: c_0773_20.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00530.pdb # 2: usage_00533.pdb # 3: usage_00621.pdb # 4: usage_00623.pdb # 5: usage_00625.pdb # 6: usage_00628.pdb # 7: usage_00631.pdb # 8: usage_00703.pdb # 9: usage_00705.pdb # 10: usage_00876.pdb # 11: usage_00878.pdb # 12: usage_00908.pdb # 13: usage_00910.pdb # # Length: 58 # Identity: 10/ 58 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 58 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 58 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00530.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00533.pdb 1 -RVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELKAHEEGRLEVLTP 57 usage_00621.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00623.pdb 1 -VLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 54 usage_00625.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00628.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR--KTMQERVLNH--PKIEVIW- 53 usage_00631.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00703.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00705.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00876.pdb 1 -PLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKN--EKIEILY- 54 usage_00878.pdb 1 -PLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKN--EKIEILY- 54 usage_00908.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 usage_00910.pdb 1 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNH--PKIEVIW- 55 l v GGGD A eeA Ltkygskv l R d R mq r kiE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################