################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:24 2021 # Report_file: c_1442_809.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00409.pdb # 2: usage_00410.pdb # 3: usage_00414.pdb # 4: usage_05935.pdb # 5: usage_05936.pdb # 6: usage_08822.pdb # 7: usage_08823.pdb # 8: usage_14066.pdb # 9: usage_14067.pdb # 10: usage_16428.pdb # 11: usage_16429.pdb # 12: usage_16727.pdb # 13: usage_16837.pdb # 14: usage_17158.pdb # # Length: 24 # Identity: 10/ 24 ( 41.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 24 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 24 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00409.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_00410.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_00414.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_05935.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_05936.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_08822.pdb 1 DNAGAMMSVDETLMCSFQILKPAD 24 usage_08823.pdb 1 DNAGAMMSVDETLMCSFQILK--- 21 usage_14066.pdb 1 ---GAMMSVDETLMCSFQILKPA- 20 usage_14067.pdb 1 ---GAMMSVDETLMCSFQILKPA- 20 usage_16428.pdb 1 DNAGAMMSVDETLMCSFQILKPA- 23 usage_16429.pdb 1 DNAGAMMSVDETLMCSFQILKPA- 23 usage_16727.pdb 1 DNAGAMMSVDETLMCSFQILKPA- 23 usage_16837.pdb 1 DNAGAMMSVDETLMCSFQILKPAE 24 usage_17158.pdb 1 DNWGAVMGVSEDLLCSFELLDPL- 23 GAmMsVdEtLmCSFqiLk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################