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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:17 2021
# Report_file: c_1141_12.html
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#====================================
# Aligned_structures: 8
#   1: usage_00292.pdb
#   2: usage_00342.pdb
#   3: usage_00343.pdb
#   4: usage_00344.pdb
#   5: usage_00539.pdb
#   6: usage_00540.pdb
#   7: usage_00541.pdb
#   8: usage_00542.pdb
#
# Length:        122
# Identity:       49/122 ( 40.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     49/122 ( 40.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           73/122 ( 59.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00292.pdb         1  EDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   60
usage_00342.pdb         1  -----------------KKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   43
usage_00343.pdb         1  -----------------KKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   43
usage_00344.pdb         1  ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   42
usage_00539.pdb         1  ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   42
usage_00540.pdb         1  ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   42
usage_00541.pdb         1  ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   42
usage_00542.pdb         1  ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN   42
                                             KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN

usage_00292.pdb        61  LELIQNG-----------------------------------------------------   67
usage_00342.pdb        44  LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  103
usage_00343.pdb        44  LELIQNGVENLSQEESKSLL-QIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  102
usage_00344.pdb        43  LELIQNGVENLSQEESKSLLQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNK  102
usage_00539.pdb        43  LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  102
usage_00540.pdb        43  LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  102
usage_00541.pdb        43  LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  102
usage_00542.pdb        43  LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN  102
                           LELIQNG                                                     

usage_00292.pdb            --     
usage_00342.pdb       104  K-  104
usage_00343.pdb       103  KY  104
usage_00344.pdb       103  Y-  103
usage_00539.pdb       103  K-  103
usage_00540.pdb       103  K-  103
usage_00541.pdb       103  K-  103
usage_00542.pdb       103  K-  103
                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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