################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:01 2021 # Report_file: c_1028_45.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00090.pdb # 2: usage_00091.pdb # 3: usage_00136.pdb # 4: usage_00242.pdb # 5: usage_00243.pdb # 6: usage_00590.pdb # 7: usage_00810.pdb # # Length: 59 # Identity: 4/ 59 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 59 ( 32.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 59 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 -SLNIIAARPA-MGKTAFALTIAQNAALKEGVGVGIYSLEM---PAAQLTLRMMCSEAR 54 usage_00091.pdb 1 GSLNIIAARPA-MGKTAFALTIAQNAALKEGVGVGIYSLEM---PAAQLTLRMMCSE-- 53 usage_00136.pdb 1 ---IIVAARPS-VGKTAFALNIAQNVATKTNENVAIFSLEM---SAQQLVMRMLCAE-- 50 usage_00242.pdb 1 -DLIIVAARPS-VGKTAFALNIAQNVATKTNENVAIFSLEM---SAQQLVMRMLCAEG- 53 usage_00243.pdb 1 -DLIIVAARPSVG-KTAFALNIAQNVATKTNENVAIFSLEM---SAQQLVMRMLCAE-- 52 usage_00590.pdb 1 -GAEFLVGRSG-SGKTKLIINSIQDELRRAPFGKPIIFLV-PDQMTFLMEYELAK---- 52 usage_00810.pdb 1 RNFVLIAARPS-MGKTAFALKQAKNMSD-NDDVVNLHSLEM---GKKENIKRLIVTA-- 52 aaRp KTafal aqn v i sLe r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################