################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:57 2021 # Report_file: c_1256_105.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_02308.pdb # 2: usage_02309.pdb # 3: usage_02310.pdb # 4: usage_02311.pdb # 5: usage_02355.pdb # 6: usage_02356.pdb # 7: usage_02357.pdb # 8: usage_02358.pdb # 9: usage_03588.pdb # 10: usage_04018.pdb # 11: usage_04019.pdb # 12: usage_04020.pdb # 13: usage_04021.pdb # # Length: 32 # Identity: 4/ 32 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 32 ( 87.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 32 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02308.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02309.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02310.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02311.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRK- 28 usage_02355.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02356.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02357.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_02358.pdb 1 --TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 29 usage_03588.pdb 1 -VMIVAGTLTNKMAPALRKVYDQMPEPRYVVS 31 usage_04018.pdb 1 M-TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 30 usage_04019.pdb 1 M-TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 30 usage_04020.pdb 1 M-TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 30 usage_04021.pdb 1 M-TVIGE-LDKQTGDLLEEIYRELDAPIIRKT 30 tvige LdkqtgdlLeeiYreldaPiirk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################