################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:33:49 2021 # Report_file: c_0456_19.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00030.pdb # 6: usage_00048.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # 9: usage_00055.pdb # 10: usage_00075.pdb # 11: usage_00086.pdb # 12: usage_00100.pdb # 13: usage_00124.pdb # 14: usage_00125.pdb # 15: usage_00132.pdb # 16: usage_00160.pdb # 17: usage_00161.pdb # 18: usage_00162.pdb # 19: usage_00163.pdb # 20: usage_00184.pdb # 21: usage_00198.pdb # 22: usage_00201.pdb # 23: usage_00202.pdb # 24: usage_00203.pdb # 25: usage_00208.pdb # 26: usage_00210.pdb # 27: usage_00211.pdb # 28: usage_00213.pdb # 29: usage_00234.pdb # 30: usage_00241.pdb # 31: usage_00244.pdb # 32: usage_00245.pdb # 33: usage_00250.pdb # # Length: 94 # Identity: 3/ 94 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 94 ( 4.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 94 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -P--VLVDFWAAWCGPC-RMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 56 usage_00018.pdb 1 -P--VLVDFWAAWCGPC-RMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 56 usage_00020.pdb 1 -----LVDFWAAWCGPC-RMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 54 usage_00021.pdb 1 -----LVDFWAAWCGPC-RMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 54 usage_00030.pdb 1 -P--VMVDFWAPWCGPS-KLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 56 usage_00048.pdb 1 --CL---VFSRKNCHVC-QKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQ 54 usage_00051.pdb 1 KL--VLVDCWAEWCAPC-HLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPT 57 usage_00052.pdb 1 KL--VLVDCWAEWCAPC-HLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPT 57 usage_00055.pdb 1 ----AVVDFWAEWCAPC-LILAPIIEELAEDYP-QVGFGKLNSDENPDIAARYGVMSLPT 54 usage_00075.pdb 1 -P--VMVDFWAPWCGPCKL-IAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 56 usage_00086.pdb 1 -V--VLADFWAPWCGPC-KMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPT 56 usage_00100.pdb 1 -----LVDFWATWCGPC-KMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 54 usage_00124.pdb 1 -V--VVVDFWAEWCGPC-RMIAPIIEELAEEYAGKVVFGKVNVDENPEIAAKYGIMSIPT 56 usage_00125.pdb 1 -V--VVVDFWAEWCGPC-RMIAPIIEELAEEYAGKVVFGKVNVDENPEIAAKYGIMSIPT 56 usage_00132.pdb 1 ----VLVDFWAPWCGPC-RMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPT 55 usage_00160.pdb 1 ----QLVDFWATWCGPC-KMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 55 usage_00161.pdb 1 GV--QLVDFWATWCGTC-KMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 57 usage_00162.pdb 1 GV--QLVDFWATWCGSC-KMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 57 usage_00163.pdb 1 GV--QLVDFWATWCGTS-KMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 57 usage_00184.pdb 1 ----VLVDFWATWCGPC-KMVAPVLEEIAKDHGEALTIAKLDVDANPETARAFQVTSIPT 55 usage_00198.pdb 1 -P--VLVDFWAPWCGPC-RMIAPIIEELAEEYEGKVKFAKVNVDENPETAAKYGIMSIPT 56 usage_00201.pdb 1 PL--VLVDFWAEWCAPC-RMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPT 57 usage_00202.pdb 1 ----PVIDFWAPWCGPC-RSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPT 55 usage_00203.pdb 1 -----VIDFWAPWCGPC-RSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPT 54 usage_00208.pdb 1 -P--VLFYFWSERSQHC-LQLTPVLESLAAQYHGQFILAKLDCDAEQ-IAAQFGLRAIPT 55 usage_00210.pdb 1 -P--VMVLFRKDNDEEA-KKVEYIVRELAQEFDGLIMVFELDTNKAPEIAKKYNITTTPT 56 usage_00211.pdb 1 -P--VMVLFRKDNDEEA-KKVEYIVRELAQEFDGLIMVFELDTNKAPEIAKKYNITTTPT 56 usage_00213.pdb 1 -P--VLFYFWSERSQHC-LQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPT 56 usage_00234.pdb 1 -P--VMVDFWAPWCGPC-KLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 56 usage_00241.pdb 1 ----VLVDFWAVWCGPC-KAIAPVVDDLAARYKGKLKVAK-DVDQHQGVPQQYGIRSIPT 54 usage_00244.pdb 1 PL--TLVDFFAPWCGPC-RLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPT 57 usage_00245.pdb 1 PL--VLVDFWAEWCAPC-R-IAPILEEIAKEYEGKLLVAKLDVDENPKTAR-YR-VSIPT 54 usage_00250.pdb 1 -P--VLVDFWATWCGPS-KMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 56 Pt usage_00017.pdb 57 LILFKGGRPVKQLIGYQPKEQ-LEAQL------- 82 usage_00018.pdb 57 LILFKGGRPVKQLIGYQPKEQ-LEAQL------- 82 usage_00020.pdb 55 LILFKGGEPVKQLIGYQPKEQ-LEAQL------- 80 usage_00021.pdb 55 LILFKGGEPVKQLIGYQPKEQ-LEAQLADVLQ-- 85 usage_00030.pdb 57 VLFFKNGERKESIIGAVPKST-LTDSIEKYL--- 86 usage_00048.pdb 55 ILYFKDGEYKGK-AGDVEDDE-VEQI-ADVL--- 82 usage_00051.pdb 58 TLIFVNGQLVDSLVGAVDEDT-LESTVNKYL--- 87 usage_00052.pdb 58 TLIFVNGQLVDSLVGAVDEDT-LESTVNKYL--- 87 usage_00055.pdb 55 VIFFKDGEPVDEIIGAVPREE-IEIRIKNLLG-- 85 usage_00075.pdb 57 VLFFKNGERKESIIGAVPKST-LTDSIEKYL--- 86 usage_00086.pdb 57 LLVLKDGEVVETSVGFKPKEA-LQELVNKHL--- 86 usage_00100.pdb 55 LILFKDGQPVKRIVGAKGKAA-LLREL------- 80 usage_00124.pdb 57 LLFFKNGKVVDQLVGARPKEA-LKERIKKYL--- 86 usage_00125.pdb 57 LLFFKNGKVVDQLVGARPKEA-LKERIKKYL--- 86 usage_00132.pdb 56 LLLFKNGQVVDRLVGAQPKEA-LKERIDKHL--- 85 usage_00160.pdb 56 LIVFKDGQPVDKVVGFQPKEN-LAEVLDKHL--- 85 usage_00161.pdb 58 LIVFKDGQPVDKVVGFQPKEN-LAEVLDKHL--- 87 usage_00162.pdb 58 LIVFKDGQPVDKVVGFQPKEN-LAEVLDKHL--- 87 usage_00163.pdb 58 LIVFKDGQPVDKVVGFQPKEN-LAEVLDKHL--- 87 usage_00184.pdb 56 LILFQNGEATKRIVGAKSKSA-LLREL------- 81 usage_00198.pdb 57 LLLFKNGEVVDKLVGARPKEA-LKERIEKHL--- 86 usage_00201.pdb 58 VILFKDGQPVEVLVGAQPKRN-YQAKIEKHL--- 87 usage_00202.pdb 56 I-LYRNGK--IDLNGAVPKAP-FDNWLDEQLS-R 84 usage_00203.pdb 55 I-LYRNGK--IDLNGAVPKAP-FDNWLDEQLS-R 83 usage_00208.pdb 56 VYLFQNGQPVDGFQGPQPEEA-IRALLDKVL--- 85 usage_00210.pdb 57 VAFFKNGEDKSVLIGAIPKDQ-LRDEILKYLG-- 87 usage_00211.pdb 57 VAFFKNGEDKSVLIGAIPKDQ-LRDEILKYLG-- 87 usage_00213.pdb 57 VYLFQNGQPVDGFQGPQPEEA-IRALL------- 82 usage_00234.pdb 57 VLFFKNGERKESIIGAVPKST-LTDSIEKYL--- 86 usage_00241.pdb 55 LLVFKGGRVVDTVIGADK--TRLEDSVKKAI--- 83 usage_00244.pdb 58 LVLFRRGAPVATWVGASPRRV-LEERLRPYLEG- 89 usage_00245.pdb 55 VILFKDGQPVEVLVGAQPKRN-YQAKIEKHL--- 84 usage_00250.pdb 57 LILFKDGQPVKRIVGAKGKAA-LLRELSDVV--- 86 G G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################