################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:48 2021 # Report_file: c_0300_77.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00101.pdb # 2: usage_00102.pdb # 3: usage_00103.pdb # 4: usage_00143.pdb # 5: usage_00616.pdb # # Length: 129 # Identity: 33/129 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/129 ( 83.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/129 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 GIGAGITPFNFPGIP------WFAPAIACGNAFILKPSERDPSVPIRLAELI-----EAG 49 usage_00102.pdb 1 GIGAGITPFNFPGIP------WFAPAIACGNAFILKPSERDPSVPIRLAELI-----EAG 49 usage_00103.pdb 1 GIGAGITPFNFPGIP------WFAPAIACGNAFILKPSERDPSVPIRLAELI-----EAG 49 usage_00143.pdb 1 GPVAVFGASNFPLA-FSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQ 59 usage_00616.pdb 1 GIGAGITPFNFPGIP------WFAPAIACGNAFILKPSERDPSVPIRLAELI-----EAG 49 GigAgitpfNFPgi wfApAiAcGnafIlKpserdPsvpirlAElI eag usage_00101.pdb 50 LPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-N--GKRAQCFGGA 105 usage_00102.pdb 50 LPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-N--GKRAQCFGGA 105 usage_00103.pdb 50 LPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-N--GKRAQCFGGA 105 usage_00143.pdb 60 LPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGA 119 usage_00616.pdb 50 LPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-N--GKRAQCFGGA 105 LPagIlnvvnG dkgavdAiltHPdIaAVsFvGStpiaRyvygtAa n gkraqcfgGA usage_00101.pdb 106 KNHII---- 110 usage_00102.pdb 106 KNHII---- 110 usage_00103.pdb 106 KNHII---- 110 usage_00143.pdb 120 INPT-FIFP 127 usage_00616.pdb 106 KNHII---- 110 kNhi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################