################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:13 2021 # Report_file: c_1457_12.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00076.pdb # 2: usage_00536.pdb # 3: usage_00882.pdb # 4: usage_00883.pdb # 5: usage_00884.pdb # 6: usage_00885.pdb # 7: usage_00932.pdb # 8: usage_01135.pdb # 9: usage_01138.pdb # 10: usage_01463.pdb # 11: usage_01595.pdb # 12: usage_02467.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 71 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/ 71 ( 94.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 D---IA----------LVG--IGSP------NWH--AF--Y--GGE----ES-DD-LNAR 27 usage_00536.pdb 1 ----V----------EPVG--N--------------E---N--DLH----LVDLA-RFAV 20 usage_00882.pdb 1 ----G----------IVNV--P--------------NP--N--NTK----FQ-EL-ARFA 20 usage_00883.pdb 1 ---------------IVNV--P--------------NP--N--NTK----FQ-EL-ARFA 19 usage_00884.pdb 1 ---------------IVNV--P--------------NP--N--NTK----FQ-EL-ARFA 19 usage_00885.pdb 1 ----G----------IVNV--P--------------NP--N--NTK----FQ-EL-ARFA 20 usage_00932.pdb 1 PNRHDY----------ALK--P--------------FG--R--TVM----NE-LK-DSD- 23 usage_01135.pdb 1 ---------------LSLK--P--------------L----KRMES----YY-KL-DKKI 19 usage_01138.pdb 1 ---KYAFVNYADPSLDIKW--E--------------NL--E--E--------AE-VSEAD 28 usage_01463.pdb 1 ----------------------------------------------GQVLLP-KT-ASSL 12 usage_01595.pdb 1 -------------------------GSVALKSYEEELA--K--DPR----IA-AT-MENA 25 usage_02467.pdb 1 ---------------NGNDIRN--------------LEKFA--DED----LV-RL-YNQE 23 usage_00076.pdb 28 Q---------- 28 usage_00536.pdb 21 TEHNKKA---- 27 usage_00882.pdb 21 IQDYNKKQN-- 29 usage_00883.pdb 20 IQDYNKKQ--- 27 usage_00884.pdb 20 IQDYNKK---- 26 usage_00885.pdb 21 IQDYNKKQ--- 28 usage_00932.pdb ----------- usage_01135.pdb 20 ISFYNRKQKAE 30 usage_01138.pdb 29 ENH-------- 31 usage_01463.pdb 13 QKWARQQ---- 19 usage_01595.pdb 26 QKG-------- 28 usage_02467.pdb 24 LVERW------ 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################