################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:53 2021 # Report_file: c_0004_47.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00117.pdb # 2: usage_00118.pdb # 3: usage_00119.pdb # 4: usage_00120.pdb # 5: usage_00436.pdb # 6: usage_00437.pdb # 7: usage_00438.pdb # 8: usage_00439.pdb # # Length: 300 # Identity: 42/300 ( 14.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/300 ( 14.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/300 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 --QAIHNDLKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRK 51 usage_00118.pdb 1 EMLRKAVGKGAYEMAYSQQENALWLATSQ-SRKLDKGGVVYRLDPVTLEVTQAIHND--- 56 usage_00119.pdb 1 EMLRKAVGKGAYEMAYSQQENALWLATSQ-SRKLDKGGVVYRLDPVTLEVTQAIHND--- 56 usage_00120.pdb 1 --QAIHNDLKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRK 51 usage_00436.pdb 1 -ELRKAVGKGAYE-AYSQQENALWLATSQ-SRKLDKGGVVYRLDPVTLEVTQAIHND--- 54 usage_00437.pdb 1 -ELRKAVGKGAYE-AYSQQENALWLATSQ-SRKLDKGGVVYRLDPVTLEVTQAIHND--- 54 usage_00438.pdb 1 --QAIHNDLKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRK 51 usage_00439.pdb 1 --QAIHNDLKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRK 51 LW V D T EV D usage_00117.pdb 52 RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--------- 102 usage_00118.pdb 57 -------LKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTGEVKGRLVL-DDRKRTEEVR 107 usage_00119.pdb 57 -------LKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTGEVKGRLVL-DDRKRTEEVR 107 usage_00120.pdb 52 RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--------- 102 usage_00436.pdb 55 -------LKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTGEVKGRLVL-DDRKRTEEVR 105 usage_00437.pdb 55 -------LKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTGEVKGRLVL-DDRKRTEEVR 105 usage_00438.pdb 52 RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--------- 102 usage_00439.pdb 52 RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--------- 102 L P T T S D K usage_00117.pdb 103 -KMSTGLALDSEGKRLYTTNAD--GELITIDTADNKILSRKKLLDDGKEHF-FINISLDT 158 usage_00118.pdb 108 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-T----GKMSTGLALDS 162 usage_00119.pdb 108 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-T----GKMSTGLALDS 162 usage_00120.pdb 103 -KMSTGLALDSEGKRLYTTNAD--GELITIDTADNKILSRKKLLDDGKEHF-FINISLDT 158 usage_00436.pdb 106 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-T----GK-STGLALDS 159 usage_00437.pdb 106 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-T----GK-STGLALDS 159 usage_00438.pdb 103 -K-STGLALDSEGKRLYTTNAD--GELITIDTADNKILSRKKLLDDGKEHF-FINISLDT 157 usage_00439.pdb 103 -K-STGLALDSEGKRLYTTNAD--GELITIDTADNKILSRKKLLDDGKEHF-FINISLDT 157 L D Y D K LD usage_00117.pdb 159 ARQRAFITDSKAAEVLVVDTRNGNILAKVAA------PESLAVLFNPARNEAYVTHRQAG 212 usage_00118.pdb 163 EGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 221 usage_00119.pdb 163 EGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 221 usage_00120.pdb 159 ARQRAFITDSKAAEVLVVDTRNGNILAKVAA------PESLAVLFNPARNEAYVTHRQAG 212 usage_00436.pdb 160 EGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 218 usage_00437.pdb 160 EGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 218 usage_00438.pdb 158 ARQRAFITDSKAAEVLVVDTRNGNILAKVAA------PESLAVLFNPARNEAYVTHRQAG 211 usage_00439.pdb 158 ARQRAFITDSKAAEVLVVDTRNGNILAKVAA------PESLAVLFNPARNEAYVTHRQAG 211 R T E DT IL AR A T A usage_00117.pdb 213 KVSVIDAKSYKVVKTFDTPTHPNSLALS-ADGKTLYVSVKQKSTKQQEATQ-PDDVIRIA 270 usage_00118.pdb 222 EVLVVDTRNGNILAKVAAP-ESLAVLFNPA-RNEAYVTHRQ----------AGKVSVID- 268 usage_00119.pdb 222 EVLVVDTRNGNILAKVAAP-ESLAVLFNPA-RNEAYVTHRQ----------AGKVSVID- 268 usage_00120.pdb 213 KVSVIDAKSYKVVKTFDTPTHPNSLALS-ADGKTLYVSVKQKSTKQQEATQ-PDDVIRIA 270 usage_00436.pdb 219 EVLVVDTRNGNILAKVAAP-ESLAVLFNPA-RNEAYVTHRQ----------AGKVSVID- 265 usage_00437.pdb 219 EVLVVDTRNGNILAKVAAP-ESLAVLFNPA-RNEAYVTHRQ----------AGKVSVID- 265 usage_00438.pdb 212 KVSVIDAKSYKVVKTFDTPTHPNSLALS-ADGKTLYVSVKQKSTKQQEATQ-PDDVIRIA 269 usage_00439.pdb 212 KVSVIDAKSYKVVKTFDTPTHPNSLALS-ADGKTLYVSVKQKSTKQQEATQ-PDDVIRIA 269 V V D P A YV Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################