################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:32:14 2021 # Report_file: c_0158_2.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00006.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00033.pdb # 5: usage_00034.pdb # 6: usage_00035.pdb # 7: usage_00078.pdb # 8: usage_00086.pdb # 9: usage_00087.pdb # 10: usage_00247.pdb # 11: usage_00252.pdb # 12: usage_00253.pdb # 13: usage_00254.pdb # 14: usage_00265.pdb # 15: usage_00321.pdb # 16: usage_00346.pdb # # Length: 148 # Identity: 129/148 ( 87.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 131/148 ( 88.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/148 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00013.pdb 1 -YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 59 usage_00014.pdb 1 -YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 59 usage_00033.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00034.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00035.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00078.pdb 1 -YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 59 usage_00086.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00087.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00247.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00252.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00253.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00254.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00265.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 usage_00321.pdb 1 -------QMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 53 usage_00346.pdb 1 NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL 60 QMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKL usage_00006.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00013.pdb 60 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 119 usage_00014.pdb 60 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 119 usage_00033.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00034.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00035.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00078.pdb 60 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMY---ASESFLHVAFQGKYVV 116 usage_00086.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00087.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00247.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00252.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPK-E--IEIQLSAGCEMYPGNASESFLHVAFQGKYVV 117 usage_00253.pdb 61 QHMFQVYRVSFTRDIQELVKMMS-KEDYPIEIQLSAGCEMY-GNASESFLHVAFQGKYVV 118 usage_00254.pdb 61 QHMFQVYRVSFTRDIQELVKMMP-KEDYPIEIQLSAGCEMY--NASESFLHVAFQGKYVV 117 usage_00265.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 usage_00321.pdb 54 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 113 usage_00346.pdb 61 QHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVV 120 QHMFQVYRVSFTRDIQELVKMMs K d IEIQLSAGCEMY ASESFLHVAFQGKYVV usage_00006.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 146 usage_00013.pdb 120 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 145 usage_00014.pdb 120 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 145 usage_00033.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNADQ 148 usage_00034.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNADQ 148 usage_00035.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLN--- 145 usage_00078.pdb 117 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 142 usage_00086.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 146 usage_00087.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 146 usage_00247.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 146 usage_00252.pdb 118 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 143 usage_00253.pdb 119 RFWGTSWQTVPGAPSWLDLPIKVLNA-- 144 usage_00254.pdb 118 RFWGTSWQTVPGAPSWLDLPIKVLNADQ 145 usage_00265.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLN--- 145 usage_00321.pdb 114 RFWGTSWQTVPGAPSWLDLPIKVLN--- 138 usage_00346.pdb 121 RFWGTSWQTVPGAPSWLDLPIKVLNADQ 148 RFWGTSWQTVPGAPSWLDLPIKVLN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################