################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:34 2021 # Report_file: c_1417_124.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00006.pdb # 2: usage_00156.pdb # 3: usage_00316.pdb # 4: usage_00356.pdb # 5: usage_00358.pdb # 6: usage_00722.pdb # 7: usage_00864.pdb # 8: usage_00886.pdb # 9: usage_00894.pdb # 10: usage_00899.pdb # 11: usage_00905.pdb # 12: usage_00907.pdb # 13: usage_00917.pdb # 14: usage_00931.pdb # 15: usage_00938.pdb # 16: usage_00959.pdb # 17: usage_01376.pdb # 18: usage_01424.pdb # 19: usage_01427.pdb # 20: usage_01563.pdb # # Length: 80 # Identity: 1/ 80 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 80 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 80 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00156.pdb 1 ------LEDLARKHGENLL----VDPHNFHLFADCIVVTLAV--NLQ-AF------TPVT 41 usage_00316.pdb 1 -------SDLSDLHAHKLR----VDPVNFKLLSHSLLVTLAC--HLPNDF------TPAV 41 usage_00356.pdb 1 -------SALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 41 usage_00358.pdb 1 -------SALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 41 usage_00722.pdb 1 -------SALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 41 usage_00864.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00886.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00894.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00899.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00905.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00907.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00917.pdb 1 ------LSDLSNLHAHKLR----VDPVNFKLLSHCLLSTLAV--HLPNDF------TPAV 42 usage_00931.pdb 1 -------------HAQKLR----VDPVNFKLLGQCFLVVVAI--HHPSAL------TPEV 35 usage_00938.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_00959.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_01376.pdb 1 APALAIQQQVQSQLI----GLDPFNLNQLRRIVQTTVAAHK-PASLAGAELAPGSHASKA 55 usage_01424.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_01427.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 usage_01563.pdb 1 ------LSALSDLHAHKLR----VDPVNFKLLSHCLLVTLAA--HLPAEF------TPAV 42 h vdp nf l a l tp usage_00006.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00156.pdb 42 HCAVDKFLELVAYELSSCYR 61 usage_00316.pdb 42 HASLDKFLANVSTVLTSK-- 59 usage_00356.pdb 42 HASLDKFLASVSTVLTS--- 58 usage_00358.pdb 42 HASLDKFLASVSTVLTS--- 58 usage_00722.pdb 42 HASLDKFLASVSTVLTSKYR 61 usage_00864.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00886.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00894.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00899.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00905.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00907.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_00917.pdb 43 HASLDKFLSSVSTVLTS--- 59 usage_00931.pdb 36 HASLDKFLCAVGAVLTA--- 52 usage_00938.pdb 43 HASLDKFLASVSTVLTS--- 59 usage_00959.pdb 43 HASLDKFLASVSTVLTS--- 59 usage_01376.pdb 56 VSNAYSAFEVAFLDLQARYL 75 usage_01424.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_01427.pdb 43 HASLDKFLASVSTVLTSKYR 62 usage_01563.pdb 43 HASLDKFLASVSTVLTSKYR 62 h dkfl v L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################