################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:35 2021 # Report_file: c_0587_45.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00086.pdb # 2: usage_00087.pdb # 3: usage_00088.pdb # 4: usage_00089.pdb # 5: usage_00100.pdb # 6: usage_00101.pdb # 7: usage_00102.pdb # # Length: 95 # Identity: 41/ 95 ( 43.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 95 ( 43.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 95 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 ----KYKVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 55 usage_00087.pdb 1 ----KYKVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 55 usage_00088.pdb 1 GV--KYKVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 57 usage_00089.pdb 1 ----KYKVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 55 usage_00100.pdb 1 GINY-KQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCV 59 usage_00101.pdb 1 GINY-KQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCV 59 usage_00102.pdb 1 GINY-KQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCV 59 VDL DGK LK D SI L HIQRSTGYGWR L I I I usage_00086.pdb 56 REVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGS 90 usage_00087.pdb 56 REVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGS 90 usage_00088.pdb 58 REVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGS 92 usage_00089.pdb 56 REVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGS 90 usage_00100.pdb 60 KNIRKDIICFVDNCYGEFDTKEPTDVGADL-IAGS 93 usage_00101.pdb 60 KNIRKDIICFVDNCYGEFDTKEPTDVGADL-IAGS 93 usage_00102.pdb 60 KNIRKDIICFVDNCYGEFDTKEPTDVGADL-IAGS 93 I FVDNCYGEF IAGS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################