################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:38:46 2021 # Report_file: c_0650_81.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00103.pdb # 2: usage_00626.pdb # 3: usage_00630.pdb # 4: usage_00784.pdb # 5: usage_00785.pdb # 6: usage_00786.pdb # 7: usage_00789.pdb # 8: usage_00790.pdb # 9: usage_00924.pdb # 10: usage_00925.pdb # 11: usage_00926.pdb # 12: usage_00927.pdb # 13: usage_00928.pdb # 14: usage_00929.pdb # 15: usage_01039.pdb # 16: usage_01040.pdb # # Length: 54 # Identity: 43/ 54 ( 79.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 54 ( 79.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 54 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLPKGLAGAR-NVSWRIINDQGGLDRLYSK- 52 usage_00626.pdb 1 GELTFGG-SIPSHYIPPKSTWAFDLP----GAR-NVSWRIINDQGGLDRLYSKN 48 usage_00630.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLPKGLAG---NVSWRIINDQGGLDRLYSKN 51 usage_00784.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLPKGLAGAR-NVSWRIINDQGGLDRLYSK- 52 usage_00785.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL--------PNVSWRIINDQGGLDRLYSK- 45 usage_00786.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL------AR-NVSWRIINDQGGLDRLYSK- 46 usage_00789.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLPKGLAGAR-NVSWRIINDQGGLDRLYSKN 53 usage_00790.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL---------NVSWRIINDQGGLDRLYSKN 45 usage_00924.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLP-KG-----NVSWRIINDQGGLDRLYSKN 48 usage_00925.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL---------NVSWRIINDQGGLDRLYSK- 44 usage_00926.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLP----GAR-NVSWRIINDQGGLDRLYSKN 49 usage_00927.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL---------NVSWRIINDQGGLDRLYSKN 45 usage_00928.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLP------R-NVSWRIINDQGGLDRLYSKN 47 usage_00929.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL---------NVSWRIINDQGGLDRLYSK- 44 usage_01039.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDL---LAGAR-NVSWRIINDQGGLDRLYSK- 49 usage_01040.pdb 1 GELTFGGKSIPSHYIPPKSTWAFDLPKGLAGAR-NVSWRIINDQGGLDRLYSKN 53 GELTFGG SIPSHYIPPKSTWAFDL NVSWRIINDQGGLDRLYSK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################