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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:33:38 2021
# Report_file: c_0015_3.html
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#====================================
# Aligned_structures: 7
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00012.pdb
#   4: usage_00013.pdb
#   5: usage_00026.pdb
#   6: usage_00029.pdb
#   7: usage_00030.pdb
#
# Length:        263
# Identity:      136/263 ( 51.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    137/263 ( 52.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           30/263 ( 11.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  QDATTNPSLILAAAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKI   60
usage_00005.pdb         1  QDATTNPSLILAAAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKI   60
usage_00012.pdb         1  -DSTTNPSLILAASKLEKYARFIDAAVEYGRKHGKTDHEKIENAMDKILVEFGTQILKVV   59
usage_00013.pdb         1  -DSTTNPSLILAASKLEKYARFIDAAVEYGRKHGKTDHEKIENAMDKILVEFGTQILKVV   59
usage_00026.pdb         1  QDATTNPSLILAAAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKI   60
usage_00029.pdb         1  QDATTNPSLILAAAQMPAYQELVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKI   60
usage_00030.pdb         1  QDATTNPSLILAAAQMPAYQELVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKI   60
                            D TTNPSLILAA     Y      A  YG K G      I NA DK  V FG  ILK  

usage_00004.pdb        61  PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGIQAGKELEEQ  120
usage_00005.pdb        61  PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGIQAGKELEEQ  120
usage_00012.pdb        60  PGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAARELEVK  119
usage_00013.pdb        60  PGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAARELEVK  119
usage_00026.pdb        61  PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGIQAGKELEEQ  120
usage_00029.pdb        61  PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQ  120
usage_00030.pdb        61  PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQ  120
                           PGRVSTEVDARLSFDK A V  A   I LYK AG  K R LIK  STWEGIQA  ELE  

usage_00004.pdb       121  HGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPQGDPGVKSVTK  180
usage_00005.pdb       121  HGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPQGDPGVKSVTK  180
usage_00012.pdb       120  HGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFYKA-L---DYTAETDPGVLSVKK  175
usage_00013.pdb       120  HGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFY-K-A----YTAETDPGVLSVKK  173
usage_00026.pdb       121  HGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVA-N-------QGDPGVKSVTK  172
usage_00029.pdb       121  HGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTK  180
usage_00030.pdb       121  HGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTK  180
                           HGIHCNMTLLFSF QAVACAEA VTLISPFVGRI D   a           DPGV SV K

usage_00004.pdb       181  IYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLKDNSKLAPALSVKAA  240
usage_00005.pdb       181  IYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLKDNSKLAPALSVKAA  240
usage_00012.pdb       176  IYSYYKRHGYATEVMAASFRNLDELKALAGIDNMTLPLNLLEQLYESTDPIENKLNSESA  235
usage_00013.pdb       174  IYSYYKRHGYATEVMAASFRNLDELKALAGIDNMTLPLNLLEQLYESTDPIENKLNSESA  233
usage_00026.pdb       173  IYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLKDNSKLAPALSVKAA  232
usage_00029.pdb       181  IYNYYKKFSYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAA  240
usage_00030.pdb       181  IYNYYKKFSYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAA  240
                           IY YYK   Y T VM ASFRN  E KALAG D  T    LL  L          L    A

usage_00004.pdb       241  QTSDSEKIHLDEKAFRWLHNEDQ  263
usage_00005.pdb       241  QTS--------------------  243
usage_00012.pdb       236  KEEG-------------------  239
usage_00013.pdb       234  KEEG-------------------  237
usage_00026.pdb       233  QTSDSEKIHLDEKAFRWLHNEDQ  255
usage_00029.pdb       241  QAS--------------------  243
usage_00030.pdb       241  QAS--------------------  243
                                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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