################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:43 2021 # Report_file: c_0677_73.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00105.pdb # 2: usage_00132.pdb # 3: usage_00133.pdb # 4: usage_00384.pdb # 5: usage_00385.pdb # 6: usage_00479.pdb # 7: usage_00774.pdb # 8: usage_01095.pdb # 9: usage_01097.pdb # 10: usage_01102.pdb # 11: usage_01188.pdb # 12: usage_01261.pdb # 13: usage_01262.pdb # 14: usage_01283.pdb # 15: usage_01284.pdb # 16: usage_01285.pdb # 17: usage_01333.pdb # # Length: 60 # Identity: 5/ 60 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 60 ( 28.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 60 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFV- 49 usage_00132.pdb 1 MFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 52 usage_00133.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_00384.pdb 1 ---VTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFV- 48 usage_00385.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFV- 49 usage_00479.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_00774.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKELDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_01095.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFV- 49 usage_01097.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_01102.pdb 1 --TVTAPKEVYTVDVGSSVSLECDFDRR-ECTELEGIRASLQKVENDTS-LQSERATLLE 56 usage_01188.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_01261.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_01262.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFV- 49 usage_01283.pdb 1 AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 52 usage_01284.pdb 1 --TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 50 usage_01285.pdb 1 ---VTVPKDLYVVEYGSNMTIECKFPVEKQLDLA-ALIVYWEME-DKNI-I-----QFVH 49 usage_01333.pdb 1 --PPTFSPALLVVTEGDNATFTCSFS---------SFVLNWYRM-QTDKLA-----AFP- 42 vT pk lyvV Gsn t eC F w f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################