################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:14 2021 # Report_file: c_0581_18.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00105.pdb # 2: usage_00188.pdb # 3: usage_00189.pdb # 4: usage_00190.pdb # 5: usage_00191.pdb # 6: usage_00300.pdb # 7: usage_00301.pdb # 8: usage_00302.pdb # 9: usage_00303.pdb # 10: usage_00304.pdb # 11: usage_00305.pdb # 12: usage_00306.pdb # 13: usage_00534.pdb # 14: usage_00535.pdb # 15: usage_00536.pdb # 16: usage_00537.pdb # 17: usage_00538.pdb # # Length: 86 # Identity: 71/ 86 ( 82.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 86 ( 86.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 86 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00188.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPH------PITYCVYVYCQNKDTSKK 52 usage_00189.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPH-P--GPPITYCVYVYCQNKDTSKK 55 usage_00190.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPH-P-G-PPITYCVYVYCQNKDTSKK 55 usage_00191.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPH----QSPITYCVYVYCQNKDTSKK 54 usage_00300.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00301.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00302.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00303.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00304.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00305.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00306.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGP--SPITYCVYVYCQNKDTSKK 56 usage_00534.pdb 1 EFAVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNAATSKK 60 usage_00535.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00536.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00537.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 usage_00538.pdb 1 --AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPHPGPDQSPITYCVYVYCQNKDTSKK 58 AVIFWGNDPYGLKKLSQAFQFGGVKAGPVSCLPH PITYCVYVYCQNkdTSKK usage_00105.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00188.pdb 53 VQMARLAWEASHPLAGNLQSSI---- 74 usage_00189.pdb 56 VQMARLAWEASHPLAGNLQSSI---- 77 usage_00190.pdb 56 VQMARLAWEASHPLAGNLQSSI---- 77 usage_00191.pdb 55 VQMARLAWEASHPLAGNLQSSI---- 76 usage_00300.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00301.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00302.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00303.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00304.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00305.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00306.pdb 57 VQMARLAWEASHPLAGNLQSSI---- 78 usage_00534.pdb 61 VQMARLEWEASHPLAGNLQSSIVSFD 86 usage_00535.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00536.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00537.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 usage_00538.pdb 59 VQMARLAWEASHPLAGNLQSSI---- 80 VQMARLaWEASHPLAGNLQSSI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################