################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:47 2021 # Report_file: c_0699_61.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00307.pdb # 2: usage_01066.pdb # 3: usage_01067.pdb # 4: usage_01068.pdb # 5: usage_01178.pdb # 6: usage_01179.pdb # 7: usage_01187.pdb # 8: usage_01188.pdb # 9: usage_01189.pdb # 10: usage_01190.pdb # 11: usage_01358.pdb # # Length: 84 # Identity: 18/ 84 ( 21.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 84 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 84 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00307.pdb 1 VGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKP---VETMPLYHFIQ 57 usage_01066.pdb 1 -RWEPATEIVYEVDGVLRGQSLMALKCPGGRHLTCHLHTTYRSKKPASAL-KMPGFHFED 58 usage_01067.pdb 1 GRWEPSTEIVYEVDGVLRGQSLMALKCPGGRHLTCHLHTTYRSKKPASAL-KMPGFHFED 59 usage_01068.pdb 1 GRWEPSTEIVYEVDGVLRGQSLMALKCPGGRHLTCHLHTTYRSKKPASAL-KMPGFHFED 59 usage_01178.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01179.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01187.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01188.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01189.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01190.pdb 1 GGWEPGCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASAL-KMPEFHFED 59 usage_01358.pdb 1 LGWEASTEMLYPADSGLRGHSQMALKLVGGGYLHCSLKTTYRSKKPAKNL-KMPGFYFVD 59 wep E Y d l G s mAlK gG hl c l TtYrSKKP l kMP fhF d usage_00307.pdb 58 HRLVKTNV----Y-VVQHETAIA- 75 usage_01066.pdb 59 HRIEIMEEVEKGKCYKQYEAAVG- 81 usage_01067.pdb 60 HRIEIMEEVEKGKCYKQYEAAVG- 82 usage_01068.pdb 60 HRIEIMEEVEKGKCYKQYEAAVG- 82 usage_01178.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01179.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01187.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01188.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01189.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01190.pdb 60 HRIEVKEVQKGKH-YEQYEAAVAR 82 usage_01358.pdb 60 RKLERIKEADKETYVEQHEMAVA- 82 hr e Q E Av #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################