################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:19 2021 # Report_file: c_0788_25.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00054.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00167.pdb # 5: usage_00168.pdb # 6: usage_00182.pdb # 7: usage_00188.pdb # 8: usage_00435.pdb # 9: usage_00457.pdb # 10: usage_00521.pdb # # Length: 104 # Identity: 32/104 ( 30.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/104 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/104 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 ------------NMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 48 usage_00057.pdb 1 ------------NMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 48 usage_00058.pdb 1 RFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 60 usage_00167.pdb 1 RFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 60 usage_00168.pdb 1 ------------NMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 48 usage_00182.pdb 1 -------------TIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKG 47 usage_00188.pdb 1 RIFDIDGRLTDDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKG 60 usage_00435.pdb 1 ------------NMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 48 usage_00457.pdb 1 ------------NMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 48 usage_00521.pdb 1 RFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSK 60 I HHG YL L F AK L P ETI MS KK Y usage_00054.pdb 49 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 92 usage_00057.pdb 49 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 92 usage_00058.pdb 61 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 104 usage_00167.pdb 61 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 104 usage_00168.pdb 49 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 92 usage_00182.pdb 48 AEDSFSSTFEKKYFVDP----IFL-KTEGNIKLGDARGKIVLLK 86 usage_00188.pdb 61 AEGSFSSTFEKNYFVDP----IFL-KTEGNIKLGDARGKIVLLK 99 usage_00435.pdb 49 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 92 usage_00457.pdb 49 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 92 usage_00521.pdb 61 VTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFN 104 F F Y P F N L GKIVL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################