################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:01:27 2021 # Report_file: c_1120_80.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00033.pdb # 2: usage_00086.pdb # 3: usage_00202.pdb # 4: usage_00203.pdb # 5: usage_00236.pdb # 6: usage_00237.pdb # 7: usage_00280.pdb # 8: usage_00281.pdb # 9: usage_00525.pdb # 10: usage_00549.pdb # 11: usage_00550.pdb # 12: usage_00552.pdb # 13: usage_00565.pdb # 14: usage_00637.pdb # 15: usage_00638.pdb # 16: usage_00639.pdb # 17: usage_00640.pdb # 18: usage_00641.pdb # 19: usage_00642.pdb # 20: usage_00643.pdb # 21: usage_00681.pdb # 22: usage_00685.pdb # 23: usage_00745.pdb # 24: usage_00854.pdb # 25: usage_00863.pdb # 26: usage_00864.pdb # 27: usage_01006.pdb # 28: usage_01031.pdb # 29: usage_01050.pdb # # Length: 95 # Identity: 14/ 95 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 95 ( 35.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 95 ( 41.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00086.pdb 1 --------------AYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 45 usage_00202.pdb 1 ---------------REVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELI 45 usage_00203.pdb 1 --------------AYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 45 usage_00236.pdb 1 --------------AQQRFTQVSDELFQG-GPNWGRLVAFFVFGAALCAESVNKEMEVLV 45 usage_00237.pdb 1 --------------AQQRFTQVSDELFQG-GPNWGRLVAFFVFGAALCAESVNKEMEVLV 45 usage_00280.pdb 1 --------------AYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 45 usage_00281.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00525.pdb 1 ---------------YQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 44 usage_00549.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00550.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00552.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00565.pdb 1 ----------------QSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 43 usage_00637.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00638.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00639.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00640.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00641.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00642.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00643.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_00681.pdb 1 --------------AYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 45 usage_00685.pdb 1 -------------TAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 46 usage_00745.pdb 1 FSDLTSQLHITPGTAYQSFEQVVNELFRD-GVNAGRIVAFFSFGGALCVESVDKEMQVLV 59 usage_00854.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00863.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_00864.pdb 1 ---------------YQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 44 usage_01006.pdb 1 -----------PGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 48 usage_01031.pdb 1 ----------TPGTAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 49 usage_01050.pdb 1 -------------TAYQSFEQVVNELFRD-GVNWGRIVAFFSFGGALCVESVDKEMQVLV 46 q F qV elF g NwGR VAfF Fg aLc esv kem vLv usage_00033.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00086.pdb 46 SRIASWMATYLNDHLEPWIQENGGWDTFVDLY--- 77 usage_00202.pdb 46 RTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFG-- 78 usage_00203.pdb 46 SRIASWMATYLNDHLEPWIQENGGWDTFVDL---- 76 usage_00236.pdb 46 GQVQEWMVAYLETRLADWIHSSGGWAEFTAL---- 76 usage_00237.pdb 46 GQVQEWMVAYLETRLADWIHSSGGWAEFTAL---- 76 usage_00280.pdb 46 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 76 usage_00281.pdb 49 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 79 usage_00525.pdb 45 SRIAAWMATYLNDHLEPWIQENGGWDTFVELY--- 76 usage_00549.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00550.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00552.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00565.pdb 44 SRIAAWMATYLNDHLEPWIQENGGWDTFVELY--- 75 usage_00637.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00638.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00639.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00640.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLY--- 80 usage_00641.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00642.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00643.pdb 49 SRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-- 81 usage_00681.pdb 46 SRIAAWMATYLNDHLEPWIQENGGWDTFVELY--- 77 usage_00685.pdb 47 SRIAAWMATYLNDHLEPWIQENGGWDTFVELY--- 78 usage_00745.pdb 60 SRIAAWMATYLND---------------------- 72 usage_00854.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00863.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_00864.pdb 45 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 75 usage_01006.pdb 49 SRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNN 83 usage_01031.pdb 50 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 80 usage_01050.pdb 47 SRIAAWMATYLNDHLEPWIQENGGWDTFVEL---- 77 Wm yL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################