################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:57 2021 # Report_file: c_0463_41.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00082.pdb # 2: usage_00180.pdb # 3: usage_00305.pdb # 4: usage_00306.pdb # 5: usage_00331.pdb # 6: usage_00332.pdb # 7: usage_00333.pdb # 8: usage_00334.pdb # 9: usage_00361.pdb # # Length: 95 # Identity: 7/ 95 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 95 ( 18.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 95 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 -KVIVTGASKGIGREMAYHLSKMG--AHVVLTAR-SEEGLQKVVSRCLELGAA--SAHYI 54 usage_00180.pdb 1 -NVLITGGDSGIGRAVSIAFAKEG--ANIAIAYLDEEGDANETKQYVEKEGV---KCVLL 54 usage_00305.pdb 1 -SVIITGSSNGIGRSAAVIFAKEG--AQVTITGR-NEDRLEETKQQILKAGVPAEKINAV 56 usage_00306.pdb 1 -SVIITGSSNGIGRSAAVIFAKEG--AQVTITGR-NEDRLEETKQQILKAGVPAEKINAV 56 usage_00331.pdb 1 KTVIITGSSNGIGRTTAILFAQEG--ANVTITGR-SSERLEETRQIILKSGVSEKQVNSV 57 usage_00332.pdb 1 KTVIITGSSNGIGRTTAILFAQEG--ANVTITGR-SSERLEETRQIILKSGVSEKQVNSV 57 usage_00333.pdb 1 KTVIITGSSNGIGRTTAILFAQEG--ANVTITGR-SSERLEETRQIILKSGVSEKQVNSV 57 usage_00334.pdb 1 KTVIITGSSNGIGRTTAILFAQEG--ANVTITGR-SSERLEETRQIILKSGVSEKQVNSV 57 usage_00361.pdb 1 --ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR-SEAPLKKLKEKYG---D---RFFYV 51 v TG s GIGr g a v r l usage_00082.pdb 55 AGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQ- 88 usage_00180.pdb 55 PGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ-- 87 usage_00305.pdb 57 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANL 91 usage_00306.pdb 57 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANL 91 usage_00331.pdb 58 VADVTTEDGQDQIINSTLKQFGKIDVLVN------ 86 usage_00332.pdb 58 VADVTTEDGQDQIINSTLKQFGKIDVLVN------ 86 usage_00333.pdb 58 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI 92 usage_00334.pdb 58 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI 92 usage_00361.pdb 52 VGDITEDSVLKQLVNAAVKGHGKIDSLVANA---- 82 d G d Lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################