################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:24 2021 # Report_file: c_0216_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00037.pdb # 5: usage_00043.pdb # 6: usage_00045.pdb # 7: usage_00046.pdb # # Length: 167 # Identity: 72/167 ( 43.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/167 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/167 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 GSQMVEASLSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 58 usage_00005.pdb 1 GSQMVEASLSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 58 usage_00006.pdb 1 --------LSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 50 usage_00037.pdb 1 -AQRIKASKSFRHPGYS--TQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTV 57 usage_00043.pdb 1 GSQMVEASLSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 58 usage_00045.pdb 1 GSQMVEASLSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 58 usage_00046.pdb 1 GSQMVEASLSVRHPEYNRP--LLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLV 58 lSvRHPeYn llaNDLMLiKLdesvseSdtirsisiaSqCptaGnsClV usage_00004.pdb 59 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 116 usage_00005.pdb 59 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 116 usage_00006.pdb 51 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 108 usage_00037.pdb 58 SGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSG 117 usage_00043.pdb 59 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 116 usage_00045.pdb 59 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 116 usage_00046.pdb 59 SGWGLLA-N-GRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 116 SGWGlla n grmPtvLqCVnVsvvSeevCsKlYdpLyhpSMfCAGggqdqKdsCNGDSG usage_00004.pdb 117 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV---- 159 usage_00005.pdb 117 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQA-- 161 usage_00006.pdb 109 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV---- 151 usage_00037.pdb 118 GPLVCRGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKHR 164 usage_00043.pdb 117 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQA-- 161 usage_00045.pdb 117 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQA-- 161 usage_00046.pdb 117 GPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQA-- 161 GPLiCnGyLQGLVSfGkaPCGQvgvPGVYTnlCKFTeWIekTv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################