################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:34 2021 # Report_file: c_1380_78.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00753.pdb # 2: usage_01648.pdb # 3: usage_02180.pdb # 4: usage_02181.pdb # # Length: 65 # Identity: 4/ 65 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 65 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 65 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00753.pdb 1 ---PPTLFVIL-----------CAPFYKLVFALLPLYWAYAGFAGGLFGYVCYDECHFFL 46 usage_01648.pdb 1 STDFVPVLFLLLLAATFEELGWRGYAFDSLQSRYSLFKASILFGIFWSLWHFPL------ 54 usage_02180.pdb 1 ---PPTLFVIL-----------CAPFYKLVFALLPLYWAYAGFAGGLFGYVCYDECHFFL 46 usage_02181.pdb 1 ---PPTLFVIL-----------CAPFYKLVFALLPLYWAYAGFAGGLFGYVCYDECHFFL 46 pptlfviL capfyklvfallpLywAyagFagglfgyvcyd usage_00753.pdb ----- usage_01648.pdb 55 ---IF 56 usage_02180.pdb 47 HHS-- 49 usage_02181.pdb 47 HH--- 48 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################