################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:27 2021 # Report_file: c_0731_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00089.pdb # 4: usage_00090.pdb # 5: usage_00115.pdb # 6: usage_00116.pdb # 7: usage_00198.pdb # 8: usage_00199.pdb # # Length: 81 # Identity: 55/ 81 ( 67.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 81 ( 75.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 --HMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 58 usage_00015.pdb 1 --HMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 58 usage_00089.pdb 1 --HMVTLDYTVQVPG------PGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 52 usage_00090.pdb 1 KAHMVTLDYTVQVP-------PGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 53 usage_00115.pdb 1 KAHMVTLDYTVQ----------GLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFK 50 usage_00116.pdb 1 --HMVTLDYTVQVP------SPGFSKFRLSYYPHCLASFTELVRAAFGGRCQHSVLGDFK 52 usage_00198.pdb 1 ---MVTLDYTV-----------QFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 46 usage_00199.pdb 1 ---MVTLDYTV-----------QFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFK 46 MVTLDYTV fSKFRLSYYPHCLASFTELvq AFGGrCQHSVLGDFK usage_00014.pdb 59 PYRPGQAYVPCYFIHVLKKTG 79 usage_00015.pdb 59 PYRPGQAYVPCYFIHVLKKTG 79 usage_00089.pdb 53 PYRPGQAYVPCYFIHVLK--- 70 usage_00090.pdb 54 PYRPGQAYVPCYFIHVLK--- 71 usage_00115.pdb 51 PYKPGQTYIPCYFIHVLK--- 68 usage_00116.pdb 53 PYKPGQAYVPCYFIHVLKKTD 73 usage_00198.pdb 47 PYRPGQAYVPCYFIHVLK--- 64 usage_00199.pdb 47 PYRPGQAYVPCYFIHVLK--- 64 PY PGQaYvPCYFIHVLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################