################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:40 2021 # Report_file: c_0238_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00024.pdb # 2: usage_00044.pdb # 3: usage_00057.pdb # 4: usage_00068.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00071.pdb # 8: usage_00072.pdb # 9: usage_00073.pdb # # Length: 132 # Identity: 38/132 ( 28.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/132 ( 67.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/132 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 TQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMK 60 usage_00044.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 usage_00057.pdb 1 QQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMP 60 usage_00068.pdb 1 TQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMK 60 usage_00069.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 usage_00070.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 usage_00071.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 usage_00072.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 usage_00073.pdb 1 TQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 60 tQYYa v erqK hcLntLfs LqiNQ iIFcnS RvelLAkki lgysc y Ha M usage_00024.pdb 61 QQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR-F 119 usage_00044.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDL----FDIQAVNVVINFDFPKLAETYLHRIGRSG--- 113 usage_00057.pdb 61 QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR-F 119 usage_00068.pdb 61 QQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR-F 119 usage_00069.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRF- 119 usage_00070.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR-F 119 usage_00071.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDL----IDIQAVNVVINFDFPKLAETYLHRIGRSGR-F 115 usage_00072.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR-F 119 usage_00073.pdb 61 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR-F 119 Q Rn vfh Fr g R LVc dL DIqaVNvviNfDfPk aeTYLHRigRsG usage_00024.pdb 120 GHLGLAINLINW 131 usage_00044.pdb ------------ usage_00057.pdb 120 GTKGLAITFVS- 130 usage_00068.pdb 120 GHLGLAIN---- 127 usage_00069.pdb ------------ usage_00070.pdb 120 GHLGLAINL--- 128 usage_00071.pdb 116 GHLGLAINL--- 124 usage_00072.pdb 120 GHLGLAIN---- 127 usage_00073.pdb 120 GHLGLAIN---- 127 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################