################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:03 2021 # Report_file: c_1098_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00031.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # # Length: 93 # Identity: 24/ 93 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 93 ( 59.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 93 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 SMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYK 60 usage_00008.pdb 1 SMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYK 60 usage_00031.pdb 1 ---AQVFEECVSFINGLP-RT-INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKK 55 usage_00036.pdb 1 -----QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 55 usage_00037.pdb 1 ----KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 56 usage_00038.pdb 1 ---QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 57 usage_00039.pdb 1 ------FQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 54 usage_00040.pdb 1 ---QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 57 usage_00041.pdb 1 ---QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK 57 F aaV vIq LP ng p E mL fYs YKQaT GpC rPgfwdpIgRyK usage_00007.pdb 61 WDAWSSLGDMTKEEAMIAYVEEMKKIIET---- 89 usage_00008.pdb 61 WDAWSSLGDMTKEEAMIAYVEEMKKIIET---- 89 usage_00031.pdb 56 YEAWKSVENLNREDAQKRYVDIVSE-------- 80 usage_00036.pdb 56 WDAWNSLGKMSREEAMSAYITEMKLVAQKVIDT 88 usage_00037.pdb 57 WDAWNSLGKMSREEAMSAYITEMKLVAQKVID- 88 usage_00038.pdb 58 WDAWNSLGKMSREEAMSAYITEMKLVAQKVID- 89 usage_00039.pdb 55 WDAWNSLGKMSREEAMSAYITEMKLVAQKVID- 86 usage_00040.pdb 58 WDAWNSLGKMSREEAMSAYITEMKLVAQKVI-- 88 usage_00041.pdb 58 WDAWNSLGKMSREEAMSAYITEMKLVAQKVID- 89 wdAW Slg m EeAm aY emk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################