################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:06 2021 # Report_file: c_1417_110.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00204.pdb # 2: usage_01223.pdb # 3: usage_01224.pdb # 4: usage_01225.pdb # 5: usage_01475.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 75 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 75 ( 70.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 -WQH----TVGKDVV-AGL------------TQR--------------EIDRQEVINELF 28 usage_01223.pdb 1 ----KETIRYYERLG----LIPEPER--YSQQTVDRLHFIKR-QELGFTLNEIDKLLGVV 49 usage_01224.pdb 1 N---KETIRYYERLG----LIPE------SQQTVDRLHFIKR-QELGFTLNEIDKLLGVV 46 usage_01225.pdb 1 ----KETIRYYERLG----LIPE--------QTVDRLHFIKR-QELGFTLNEIDKLLGVV 43 usage_01475.pdb 1 S---AEVLRQWERRYG---F------PKYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQ 48 r er v t usage_00204.pdb 29 VTEASHLRTLRVLDL 43 usage_01223.pdb 50 DR------------- 51 usage_01224.pdb 47 DR------------- 48 usage_01225.pdb 44 DR------------- 45 usage_01475.pdb --------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################