################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:23:43 2021 # Report_file: c_0741_19.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00042.pdb # 2: usage_00043.pdb # 3: usage_00055.pdb # 4: usage_00060.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00085.pdb # 8: usage_00119.pdb # 9: usage_00129.pdb # 10: usage_00185.pdb # 11: usage_00219.pdb # 12: usage_00221.pdb # 13: usage_00222.pdb # 14: usage_00224.pdb # 15: usage_00225.pdb # 16: usage_00226.pdb # 17: usage_00227.pdb # 18: usage_00237.pdb # 19: usage_00273.pdb # 20: usage_00274.pdb # 21: usage_00275.pdb # 22: usage_00276.pdb # 23: usage_00286.pdb # 24: usage_00305.pdb # 25: usage_00325.pdb # 26: usage_00330.pdb # 27: usage_00331.pdb # 28: usage_00332.pdb # 29: usage_00336.pdb # 30: usage_00337.pdb # 31: usage_00341.pdb # 32: usage_00343.pdb # 33: usage_00351.pdb # 34: usage_00356.pdb # 35: usage_00357.pdb # 36: usage_00359.pdb # 37: usage_00369.pdb # 38: usage_00377.pdb # 39: usage_00396.pdb # # Length: 71 # Identity: 37/ 71 ( 52.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 71 ( 53.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 71 ( 43.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 --IFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 38 usage_00043.pdb 1 ---FIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 37 usage_00055.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00060.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFT-EQ---------------------DFV 38 usage_00062.pdb 1 NCVFIVIHRSTTSQTIKVSADDTPGTILQSFFTK--M--A-KN-----------E-RDFV 43 usage_00063.pdb 1 NCVFIVIHRSTTSQTIKVSADDTPGTILQSFFTK--M--------------------DFV 38 usage_00085.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K--------------QDFV 41 usage_00119.pdb 1 --IFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M-E-----------------QDFV 38 usage_00129.pdb 1 NCIFIKIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K-KKSLMDIPESQSEQDFV 54 usage_00185.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 40 usage_00219.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK-----------------------DFV 37 usage_00221.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00222.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFT------------------------DFV 36 usage_00224.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K--------------QDFV 41 usage_00225.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M-E-----------------QDFV 40 usage_00226.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M-E-----------------QDFV 40 usage_00227.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M-E-----------------QDFV 40 usage_00237.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 40 usage_00273.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFT------------------------DFV 36 usage_00274.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSF--------------------------DFV 34 usage_00275.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--------------------DFV 38 usage_00276.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M-------------------RDFV 39 usage_00286.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00305.pdb 1 ----IVIHRSTTSQTIKVSPDDTPGAILQSFFT------------------------DFV 32 usage_00325.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-----------------DFV 39 usage_00330.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTKEQ---------------------DFV 39 usage_00331.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00332.pdb 1 --IFIVIHRSTTSQTIKVSPDDTPGAILQSF--------------------------DFV 32 usage_00336.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 40 usage_00337.pdb 1 ----IVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 36 usage_00341.pdb 1 --IFIVIHRSTTSQTIKVSPDDTPGAILQSFFT------------------------DFV 34 usage_00343.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00351.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K--------------QDFV 41 usage_00356.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 40 usage_00357.pdb 1 NCVFIVIHRSTTSQTIKVSADDTPGTILQSFFTK--MNE-----------------RDFV 41 usage_00359.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A--------------E-QDFV 41 usage_00369.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--A-K---------------DFV 40 usage_00377.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--AE---------------QDFV 41 usage_00396.pdb 1 NCIFIVIHRSTTSQTIKVSPDDTPGAILQSFFTK--M--------------------DFV 38 IvIHRSTTSQTIKVS DDTPG ILQSF DFV usage_00042.pdb 39 LRVCGRDEYLV 49 usage_00043.pdb 38 LRVCGRDEYLV 48 usage_00055.pdb 42 LRVCGRDEYLV 52 usage_00060.pdb 39 LRVCGRDEYLV 49 usage_00062.pdb 44 LRVCGRDEYLV 54 usage_00063.pdb 39 LRVCGRDEYLV 49 usage_00085.pdb 42 LRVCGRDEYLV 52 usage_00119.pdb 39 LRVCGRDEYLV 49 usage_00129.pdb 55 LRVCGRDEYLV 65 usage_00185.pdb 41 LRVCGRDEYLV 51 usage_00219.pdb 38 LRVCGRDEYL- 47 usage_00221.pdb 42 LRVCGRDEYLV 52 usage_00222.pdb 37 LRVCGRDEYL- 46 usage_00224.pdb 42 LRVCGRDEYLV 52 usage_00225.pdb 41 LRVCGRDEYLV 51 usage_00226.pdb 41 LRVCGRDEYL- 50 usage_00227.pdb 41 LRVCGRDEYLV 51 usage_00237.pdb 41 LRVCGRDEYLV 51 usage_00273.pdb 37 LRVCGRDEYLV 47 usage_00274.pdb 35 LRVCGRDEYLV 45 usage_00275.pdb 39 LRVCGRDEYLV 49 usage_00276.pdb 40 LRVCGRDEYLV 50 usage_00286.pdb 42 LRVCGRDEYLV 52 usage_00305.pdb 33 LRVCGRDEYLV 43 usage_00325.pdb 40 LRVCGRDEYL- 49 usage_00330.pdb 40 LRVCGRDEYLV 50 usage_00331.pdb 42 LRVCGRDEYLV 52 usage_00332.pdb 33 LRVCGRDEYLV 43 usage_00336.pdb 41 LRVCGRDEYLV 51 usage_00337.pdb 37 LRVCGRDEYLV 47 usage_00341.pdb 35 LRVCGRDEYLV 45 usage_00343.pdb 42 LRVCGRDEYLV 52 usage_00351.pdb 42 LRVCGRDEYLV 52 usage_00356.pdb 41 LRVCGRDEYLV 51 usage_00357.pdb 42 LRVCGRDEYLV 52 usage_00359.pdb 42 LRVCGRDEYLV 52 usage_00369.pdb 41 LRVCGRDEYLV 51 usage_00377.pdb 42 LRVCGRDEYL- 51 usage_00396.pdb 39 LRVCGRDEYLV 49 LRVCGRDEYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################