################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:05 2021 # Report_file: c_1115_34.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00366.pdb # 2: usage_00367.pdb # 3: usage_00368.pdb # 4: usage_00404.pdb # 5: usage_00405.pdb # 6: usage_00444.pdb # 7: usage_00445.pdb # 8: usage_00459.pdb # 9: usage_01056.pdb # 10: usage_01057.pdb # 11: usage_01058.pdb # 12: usage_01059.pdb # 13: usage_01099.pdb # 14: usage_01100.pdb # 15: usage_01242.pdb # 16: usage_01561.pdb # 17: usage_01646.pdb # 18: usage_01647.pdb # 19: usage_01648.pdb # 20: usage_01649.pdb # 21: usage_01650.pdb # 22: usage_01651.pdb # # Length: 87 # Identity: 19/ 87 ( 21.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 87 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 87 ( 23.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00366.pdb 1 HAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENP---------------NPTEAEIRMGM 45 usage_00367.pdb 1 HAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENP---------------NPTEAEIRMGM 45 usage_00368.pdb 1 HAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENP---------------NPTEAEIRMGM 45 usage_00404.pdb 1 SKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNP---------------SPSRDEIKAAL 45 usage_00405.pdb 1 SKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNP---------------SPSRDEIKAAL 45 usage_00444.pdb 1 SLLQQCFLEAGAVQCGYCTPGMILTAKALLDKNP---------------DPTDEEITVAM 45 usage_00445.pdb 1 SLLQQCFLEAGAVQCGYCTPGMILTAKALLDKNP---------------DPTDEEITVAM 45 usage_00459.pdb 1 SKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNP---------------SPSRDEIKAAL 45 usage_01056.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01057.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01058.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01059.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01099.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01100.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01242.pdb 1 HPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERM 60 usage_01561.pdb 1 -PIQEAFWENHALQCGYCTPGMIMEAYWLLREKP---------------NPTEEEIREGI 44 usage_01646.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01647.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01648.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01649.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01650.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 usage_01651.pdb 1 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENP---------------SPTEAEIRFGI 45 Q F QCG CTpGm L p p EI usage_00366.pdb 46 TGNLCRCTGYQNIVKAVQYAARKLQE- 71 usage_00367.pdb 46 TGNLCRCTGYQNIVKAVQYAARKLQE- 71 usage_00368.pdb 46 TGNLCRCTGYQNIVKAVQYAARKLQE- 71 usage_00404.pdb 46 AGNLCRCTGYVKIIKSVETAAAARLCE 72 usage_00405.pdb 46 AGNLCRCTGYVKIIKSVETAAAARLCE 72 usage_00444.pdb 46 SGNLCRCTGYIKIHAAVRYAVERCANA 72 usage_00445.pdb 46 SGNLCRCTGYIKIHAAVRYAVERC--- 69 usage_00459.pdb 46 AGNLCRCTGYVKIIKSVETAAAAR--- 69 usage_01056.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01057.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 usage_01058.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01059.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 usage_01099.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01100.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 usage_01242.pdb 61 SGNICRCGAYANILAAIEDAAGE---- 83 usage_01561.pdb 45 SGNLCRCTGYQNIVKAIKAAAEKLS-- 69 usage_01646.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01647.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 usage_01648.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01649.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 usage_01650.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKIN-- 70 usage_01651.pdb 46 GGNLCRCTGYQNIVKAIQYAAAKINGV 72 GNlCRCtgY I A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################