################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:54 2021 # Report_file: c_1050_3.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00422.pdb # 2: usage_00446.pdb # 3: usage_00492.pdb # 4: usage_00543.pdb # 5: usage_00544.pdb # # Length: 80 # Identity: 23/ 80 ( 28.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 80 ( 65.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 80 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00422.pdb 1 --SIILFLNKTDLLEEKVQ-V-VSIKDYFLEFE---------GDPH---CLRDVQKFLVE 44 usage_00446.pdb 1 --SIILFLNKTDLLEEKVQ-V-VSIKDYFLEFE---------GDPH---CLRDVQKFLVE 44 usage_00492.pdb 1 TISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRD 60 usage_00543.pdb 1 --SIILFLNKTDLLEEKVQ-V-VSIKDYFLEFE---------GDPH---CLRDVQKFLVE 44 usage_00544.pdb 1 --SIILFLNKTDLLEEKVQ-V-VSIKDYFLEFE---------GDPH---CLRDVQKFLVE 44 SiILFLNKtDLLeEKVq v vsIkDYFlEFe gdPh clrdvqkFlve usage_00422.pdb 45 CFRGKRR---DP-LYHHF-- 58 usage_00446.pdb 45 CFRGKRR---DQ-QPLYHHF 60 usage_00492.pdb 61 EFLRISTASGDGRHYCYPHF 80 usage_00543.pdb 45 CFRGKRR---DR-PLYHHF- 59 usage_00544.pdb 45 CFRGKRR---DP-LYHHF-- 58 cFrgkrr D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################