################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:53 2021 # Report_file: c_1200_258.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00697.pdb # 4: usage_02750.pdb # 5: usage_02751.pdb # 6: usage_03548.pdb # 7: usage_04173.pdb # 8: usage_05208.pdb # 9: usage_05209.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 44 ( 2.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 44 ( 72.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 K-----SPVQCIDYSGD--EVQVT-TTDGTGYSA---------- 26 usage_00034.pdb 1 K-----SPVQCIDYSGD--EVQVT-TTDGTGYSAQ--------- 27 usage_00697.pdb 1 ----------VPTAFDVDGDEVMVVRDGDSVYAI---------- 24 usage_02750.pdb 1 Q-----TVVTGIDQSGD--VVNVT-VKDGHAFQAH--------- 27 usage_02751.pdb 1 Q-----TVVTGIDQSGD--VVNVT-VKDGHAFQAH--------- 27 usage_03548.pdb 1 --------------------FYGI-DDQGEMYVSPRSDNAHQIQ 23 usage_04173.pdb 1 -GFSGEGQL-----------EQVM-ASDGRSFV----------- 20 usage_05208.pdb 1 Q-----TVVTGIDQSGD--VVNVT-VKDGHAFQAH--------- 27 usage_05209.pdb 1 Q-----TVVTGIDQSGD--VVNVT-VKDGHAFQAH--------- 27 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################