################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:48 2021 # Report_file: c_1363_98.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00823.pdb # 2: usage_00893.pdb # 3: usage_00969.pdb # 4: usage_01326.pdb # 5: usage_01327.pdb # 6: usage_01328.pdb # 7: usage_01489.pdb # 8: usage_02045.pdb # # Length: 41 # Identity: 12/ 41 ( 29.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 41 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 41 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00823.pdb 1 -FDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG-- 38 usage_00893.pdb 1 KFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG-- 39 usage_00969.pdb 1 -YDKLLNRILEEGMDPKDYEWYLDLRRYGSVPHSGFGLGVE 40 usage_01326.pdb 1 NYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVE 41 usage_01327.pdb 1 -YDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLG-- 38 usage_01328.pdb 1 NYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLG-- 39 usage_01489.pdb 1 -HDILVEQIKEKGLNPESFEFYLKAFRYGMPPHGGFGLG-- 38 usage_02045.pdb 1 -HDILVEQIKEKGLNPESFEFYLKAFRYGMPPHGGFGLG-- 38 D L k P Y YG PHgG GLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################