################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:50 2021 # Report_file: c_1166_104.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00022.pdb # 2: usage_00072.pdb # 3: usage_00321.pdb # 4: usage_00322.pdb # 5: usage_00398.pdb # 6: usage_00404.pdb # 7: usage_00557.pdb # 8: usage_00920.pdb # 9: usage_00926.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 36 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 36 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 --GIL----D---SNGQVFLINPN--G-I----TIG 20 usage_00072.pdb 1 -G---WHKSA---YGNWWYQAP-DSTG--EYA-VG- 24 usage_00321.pdb 1 -G---WK-QE---NGMWYFYNT-D--G--SMA-TG- 21 usage_00322.pdb 1 -G---WK-QE---NGMWYFYNT-D--G--SMA-TG- 21 usage_00398.pdb 1 -G---MR-TI---DGKKYYFNT-N--T--AEAATG- 22 usage_00404.pdb 1 DR---WRKHT---DGNWYWFDN-S--G--EMA-TG- 23 usage_00557.pdb 1 -----WF-QV---NGKWYYAYS-S--G--ALA-V-- 19 usage_00920.pdb 1 -I----GWRN---D-ASHLLVF-TTDA--KTH-IA- 22 usage_00926.pdb 1 -C---TH-TKNTMDPWWRMDLS-Q--TH-----R-- 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################