################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:12 2021 # Report_file: c_0568_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # # Length: 48 # Identity: 5/ 48 ( 10.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 48 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 48 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SCAGKLKTGSLNQDD--QS--FLDDDQIDEGWVLTCAAYPVSDVTIE- 43 usage_00002.pdb 1 SCAGKVESGEVDQSD--QS--FLDDAQMGKGFVLTCVAYPTSDVTIL- 43 usage_00003.pdb 1 SCKTALCSGEADHRD--M---VL-RDDEKGTQIMVCVSRAKSAELVLD 42 usage_00004.pdb 1 TCAGKITAGSVDQSD--QS--FLDDDQIEAGYVLTCVAYPTSDCTIE- 43 usage_00005.pdb 1 -CAGKVVSGSIDQSD--QS--FLDDEQMDAGYVLTCHAYPTSDVVIE- 42 usage_00006.pdb 1 SCLGKVVSGSVDESE--GS--FLDDGQMEEGFVLTCIAIPESDLVIE- 43 usage_00007.pdb 1 TCAGKLISGTVDQSD--QS--FLDDDQIEAGYVLTCVAYPTSDCVIE- 43 usage_00008.pdb 1 TCAGKLLEGEVDQSD--QS--FLDDDQIEKGFVLTCVAYPRSDKIL-- 42 usage_00009.pdb 1 TCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPTSDAVFQ- 47 usage_00010.pdb 1 TCAGKITAGTVDQSD--QS--FLDDDQIQAGYVLTCVAYPTSDCTIL- 43 usage_00011.pdb 1 TCAGKITAGTVDQSD--QS--FLDDDQIQAGYVLTCVAYPTSDCTIL- 43 usage_00012.pdb 1 TCAGKLISGTVDQSD--QS--FLDDDQIEAGYVLTCVAYPTSDCVIE- 43 usage_00013.pdb 1 TCAGKLISGTVDQSD--QS--FLDDDQIEAGYVLTCVAYPTSDCVIE- 43 C G d L g vl C p Sd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################