################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:27 2021 # Report_file: c_1445_706.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_01237.pdb # 2: usage_02011.pdb # 3: usage_02012.pdb # 4: usage_04398.pdb # 5: usage_05972.pdb # 6: usage_09020.pdb # 7: usage_10044.pdb # 8: usage_10046.pdb # 9: usage_10048.pdb # 10: usage_11095.pdb # 11: usage_12821.pdb # 12: usage_16824.pdb # 13: usage_17454.pdb # # Length: 15 # Identity: 1/ 15 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 15 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 15 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01237.pdb 1 YA-VVTQEPIYIITE 14 usage_02011.pdb 1 YA-VVSEEPIYIVTE 14 usage_02012.pdb 1 YA-VVSEEPIYIVTE 14 usage_04398.pdb 1 YA-VVSEEPIYIVTE 14 usage_05972.pdb 1 HA-VVTKEPIYIITE 14 usage_09020.pdb 1 EV-ILGETKAYVFFE 14 usage_10044.pdb 1 YAVVSVGDPVYIITE 15 usage_10046.pdb 1 YAVVSVGDPVYIITE 15 usage_10048.pdb 1 YAVVSVGDPVYIITE 15 usage_11095.pdb 1 YA-VVTQEPIYIITE 14 usage_12821.pdb 1 YA-VVSEEPIYIVTE 14 usage_16824.pdb 1 YA-VVSEEPIYIVME 14 usage_17454.pdb 1 HV-LETANKIFMVLE 14 y E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################