################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:45 2021 # Report_file: c_1057_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00272.pdb # 2: usage_00279.pdb # 3: usage_00355.pdb # 4: usage_00356.pdb # 5: usage_00450.pdb # 6: usage_00476.pdb # 7: usage_00477.pdb # # Length: 92 # Identity: 14/ 92 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 92 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 92 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00272.pdb 1 --EAVDQAARAVLQAAGLGPDYRLPGLPHRTGHGCGLA----IH-EAPYLVRGNRQPLQP 53 usage_00279.pdb 1 --QQVDDAARRVITEAGYG---D--YFGHNTGHAIGIE----VH-EDPRFSPRDTTTLQP 48 usage_00355.pdb 1 --EAVDQAARAVLQAAGLGPDYRLPGLPHRTGHGCGLA----IH-EAPYLVRGNRQPLQP 53 usage_00356.pdb 1 --EAVDQAARAVLQAAGLGPDYRLPGLPHRTGHGCGLA----IH-EAPYLVRGNRQPLQP 53 usage_00450.pdb 1 RCSDIARELNEIFLKHDVL---Q--YRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEP 55 usage_00476.pdb 1 --EAVDQAARAVLQAAGLGPDYRLPGLPHRTGHGCGLA----IH-EAPYLVRGNRQPLQP 53 usage_00477.pdb 1 --EAVDQAARAVLQAAGLGPDYRLPGLPHRTGHGCGLA----IH-EAPYLVRGNRQPLQP 53 vd aar v ag g h tGH G h e p l LqP usage_00272.pdb 54 GMCASNEPMIVVPG----AFGVALEDHFYV-- 79 usage_00279.pdb 49 GMLLTVEPGIYLPG----QGGVRIEDVVLVTP 76 usage_00355.pdb 54 GMCASNEPMIVVPG----AFGVRLEDHFYV-- 79 usage_00356.pdb 54 GMCASNEPMIVVPG----AFGVRLEDHFYVTD 81 usage_00450.pdb 56 GMVVSMEPMIMLPEGLPGAGGYREHDILIVNE 87 usage_00476.pdb 54 GMCASNEPMIVVPG----AFGVRLEDHFYVTD 81 usage_00477.pdb 54 GMCASNEPMIVVPG----AFGVRLEDHFYV-- 79 GM s EPmI Pg a Gvr eD V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################