################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:54:59 2021 # Report_file: c_0004_9.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00106.pdb # 2: usage_00108.pdb # 3: usage_00111.pdb # # Length: 259 # Identity: 257/259 ( 99.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 257/259 ( 99.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/259 ( 0.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 --QRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITG 58 usage_00108.pdb 1 --QRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITG 58 usage_00111.pdb 1 LIQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITG 60 QRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITG usage_00106.pdb 59 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQ 118 usage_00108.pdb 59 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQ 118 usage_00111.pdb 61 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQ 120 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQ usage_00106.pdb 119 AGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGL 178 usage_00108.pdb 119 AGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGL 178 usage_00111.pdb 121 AGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGL 180 AGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGL usage_00106.pdb 179 SILSLNDKSVKHFVHPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNLSSYIFSIK 238 usage_00108.pdb 179 SILSLNDKSVKHFVHPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNLSSYIFSIK 238 usage_00111.pdb 181 SILSLNDKSVKHFVHPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNLSSYIFSIK 240 SILSLNDKSVKHFVHPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNLSSYIFSIK usage_00106.pdb 239 QLKDNKLWIATELNGIILD 257 usage_00108.pdb 239 QLKDNKLWIATELNGIILD 257 usage_00111.pdb 241 QLKDNKLWIATELNGIILD 259 QLKDNKLWIATELNGIILD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################