################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:06 2021 # Report_file: c_0146_22.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00113.pdb # 4: usage_00119.pdb # 5: usage_00187.pdb # 6: usage_00212.pdb # 7: usage_00213.pdb # 8: usage_00235.pdb # # Length: 133 # Identity: 51/133 ( 38.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/133 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/133 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 VQLVESGGGLVQPGGSLRLSCVTSGFTFRKFGMSWVRQAPGKGLEWVASISTPRGSTTYY 60 usage_00048.pdb 1 VQLVESGGGLVQPGGSLRLSCVTSGFTFRKFGMSWVRQAPGKGLEWVASISTPRGSTTYY 60 usage_00113.pdb 1 VQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISY-DANYKYY 59 usage_00119.pdb 1 VQLVESGGGVVQPGRSLRLSCVGSQFSFNRYGMHWVRQAPGKGLEWVAGISF-DGTDRYH 59 usage_00187.pdb 1 VQLKQSGPGLVQPSQSLSITCTVSGFSLIDYGVHWVRQSPGKGLEWLGVIWT-GG-STDY 58 usage_00212.pdb 1 -QLKQSGPGLVQPSQSLSITCTVSGFSLIDYGVHWVRQSPGKGLEWLGVIWT-GG-STDY 57 usage_00213.pdb 1 -QLKQSGPGLVQPSQSLSITCTVSGFSLIDYGVHWVRQSPGKGLEWLGVIWT-GG-STDY 57 usage_00235.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFSSYIMMWVRQAPGKGLEWVSSIYP-SGGITFY 59 QL SG G VQP SL C SgF WVRQ PGKGLEW I g y usage_00047.pdb 61 SDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGYSST--------------SYA 106 usage_00048.pdb 61 SDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGYSST--------------SYA 106 usage_00113.pdb 60 ADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLL---YFE-WLSQ-GY 114 usage_00119.pdb 60 ADNVWGRFTISRDNSKNTLYLQMSSLRAEDTALYYCAKDLRED-ECEEWPCRKSRGVAGV 118 usage_00187.pdb 59 NAAFISRLTISKDNSKSQVFFKMNSLQANDTGIYYCGRPYY----------------GNV 102 usage_00212.pdb 58 NAAFISRLTISKDNSKSQVFFKMNSLQANDTGIYYCGRPYY----------------GNV 101 usage_00213.pdb 58 NAAFISRLTISKDNSKSQVFFKMNSLQANDTGIYYCGRPYY----------------GNV 101 usage_00235.pdb 60 ADTVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARIKLGT--------------VTT 105 R TIS DNSK MnSL A DT YYC usage_00047.pdb 107 MDYWGQGTLVTVS 119 usage_00048.pdb 107 MDYWGQGTLVTVS 119 usage_00113.pdb 115 FDYWGQGTLVTVS 127 usage_00119.pdb 119 FDKWGQGTMVTV- 130 usage_00187.pdb 103 MDYWGQGTSVTVS 115 usage_00212.pdb 102 MDYWGQGTSVTV- 113 usage_00213.pdb 102 MDYWGQGTSVTV- 113 usage_00235.pdb 106 VDYWGQGTLVTVS 118 DyWGQGT VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################