################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:31 2021 # Report_file: c_1102_9.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00051.pdb # 4: usage_00053.pdb # 5: usage_00056.pdb # 6: usage_00061.pdb # 7: usage_00071.pdb # 8: usage_00073.pdb # 9: usage_00075.pdb # 10: usage_00076.pdb # 11: usage_00115.pdb # 12: usage_00117.pdb # 13: usage_00118.pdb # 14: usage_00120.pdb # 15: usage_00121.pdb # 16: usage_00162.pdb # 17: usage_00164.pdb # 18: usage_00166.pdb # 19: usage_00168.pdb # 20: usage_00170.pdb # 21: usage_00172.pdb # 22: usage_00174.pdb # 23: usage_00176.pdb # # Length: 121 # Identity: 25/121 ( 20.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/121 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/121 ( 21.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -----QAFWKAVTAEFLAMLIFVLLSLGSTI-NW-----GGTEKPLPV---DMVLISLCF 46 usage_00013.pdb 1 -----QAFWKAVTAEFLAMLIFVLLSVGSTINW-GGSEN-----P--L-PVDMVLISLCF 46 usage_00051.pdb 1 -----IAFSRAVFAEFLATLLFVFFGLGSAL-NW-----P--QAL--P---SVLQIAMAF 42 usage_00053.pdb 1 ----SIAFSRAVFAEFLATLLFVFFGLGSAL-NW-----P--QAL--P---SVLQIAMAF 43 usage_00056.pdb 1 SELRSIAFSRAVFAEFLATLLFVFFGLGSAL-NW-----P--QAL--P---SVLQIAMAF 47 usage_00061.pdb 1 ------AFSRAVFAEFLATLLFVFFGLGSAL-NW-----P--QAL--P---SVLQIAMAF 41 usage_00071.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00073.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00075.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00076.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00115.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00117.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00118.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00120.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00121.pdb 1 ----SLASLRAYLAEFISTLLFVFAGVGSAIAY-AKL--TS-DAA--LDTPGLVAIAVCH 50 usage_00162.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00164.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00166.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00168.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00170.pdb 1 ----SVAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 43 usage_00172.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00174.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 usage_00176.pdb 1 -----VAFLKAVFAEFLATLIFVFFGLGSAL-KW-----P--SAL--P---TILQIALAF 42 Af Av AEFla L FV GS I f usage_00012.pdb 47 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLV- 105 usage_00013.pdb 47 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVT 106 usage_00051.pdb 43 GLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI- 101 usage_00053.pdb 44 GLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI- 102 usage_00056.pdb 48 GLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI- 106 usage_00061.pdb 42 GLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI- 100 usage_00071.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00073.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG-- 100 usage_00075.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00076.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00115.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00117.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00118.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00120.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00121.pdb 51 GFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT 110 usage_00162.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00164.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00166.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00168.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00170.pdb 44 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 102 usage_00172.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00174.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 usage_00176.pdb 43 GLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV- 101 Gl i t q g SG HiNPA T a s FY AQ Ga ga L usage_00012.pdb - usage_00013.pdb - usage_00051.pdb - usage_00053.pdb - usage_00056.pdb - usage_00061.pdb - usage_00071.pdb - usage_00073.pdb - usage_00075.pdb - usage_00076.pdb - usage_00115.pdb - usage_00117.pdb - usage_00118.pdb - usage_00120.pdb - usage_00121.pdb 111 G 111 usage_00162.pdb - usage_00164.pdb - usage_00166.pdb - usage_00168.pdb - usage_00170.pdb - usage_00172.pdb - usage_00174.pdb - usage_00176.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################