################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:43 2021 # Report_file: c_0701_122.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00077.pdb # 2: usage_00235.pdb # 3: usage_00243.pdb # 4: usage_00794.pdb # 5: usage_00936.pdb # 6: usage_01248.pdb # # Length: 54 # Identity: 5/ 54 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 54 ( 31.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 54 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 --TVQMEGGKLVVNFPN----YHQTSEI--VGDKLVEVSTIGGVTYERVSK--- 43 usage_00235.pdb 1 ---VQMEGGKVVVNSPN----YHHTAEI--VDGKLVEVSTVGGVSYERVSKKLA 45 usage_00243.pdb 1 KATVQMEGGKVVVNSPN----YHHTAEI--VDGKLVEVSTVGGVSYERVSKKL- 47 usage_00794.pdb 1 --TVQMEGGKLVVNFPN----YHQTSEI--VGDKLVEVSTIGGVTYERVSKRLA 46 usage_00936.pdb 1 ---VHLANGKLVTKSEK----FSHEQEV--KGNEMVETITFGGVTLIRRSKR-- 43 usage_01248.pdb 1 --IAVFDGKKITVTGTLWNGNKIIDERLINPDGSLLFRVTINGVTGWRLCERIL 52 v ggK vv e lve T gGV R sk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################