################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:58:57 2021 # Report_file: c_0398_136.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00303.pdb # 2: usage_00520.pdb # 3: usage_00829.pdb # # Length: 159 # Identity: 9/159 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/159 ( 41.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 80/159 ( 50.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00303.pdb 1 YQVHRVVAGYDANDLYVSVAGQYEAAK-----NNEVGS-IKGKKHEQTQVAATAAYRFGN 54 usage_00520.pdb 1 --------GYDHDALYASVAVQQQDAK-----LT-W--RDDNSHNSQTEVATTVAYRFGN 44 usage_00829.pdb 1 ----------------LSGSVQYALNDNAGRH-----------NSES--YHAGFNYKNGG 31 SvavQy ak eq vaat aYrfGn usage_00303.pdb 55 VTPRVSYAHGFK------AKVN-GVKDAN-YQYDQVIVGADYDFSKRTSALVSAGWLKQG 106 usage_00520.pdb 45 VTPRVSYAHGFK------GSV-YDAD--HDNTYDQVVVGAEYDFSKRTSALVSAGWLQKG 95 usage_00829.pdb 32 FFVQYGGAYKRHHQVQNI----------EKYQIHRLVSGYDND-----ALYASVAVQQQD 76 vtprvsyAhgfk yqydqvvvGadyD salvSagwlqqg usage_00303.pdb 107 ---------KGAGKVEQTASMVGLRHK-----------F 125 usage_00520.pdb 96 ---------KGAEKFVATVGGVGLRHK-----------F 114 usage_00829.pdb 77 AKLTDASNS--HNSQTEVAATLAYR-FGNVTPRVSYAH- 111 a k ta vglR k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################