################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:23 2021 # Report_file: c_0173_34.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00012.pdb # 2: usage_00039.pdb # 3: usage_00148.pdb # 4: usage_00199.pdb # 5: usage_00200.pdb # 6: usage_00313.pdb # 7: usage_00372.pdb # # Length: 123 # Identity: 8/123 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/123 ( 21.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/123 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 R-Y-GISTAQIVPRFVAGLRESA--QAEVRGIASRRLENAQK-AKELAIPVAYGSYEELC 55 usage_00039.pdb 1 -RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELA 59 usage_00148.pdb 1 -KLGVIGTGAISHHFIEAAHTSG--EYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFF 57 usage_00199.pdb 1 -RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELA 59 usage_00200.pdb 1 -RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELA 59 usage_00313.pdb 1 -RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELA 59 usage_00372.pdb 1 -RVLIVGAK-FGEMYLNAFMQ----GLELVGLLAQGSARSRELAHAFGIP-LYTSPEQI- 52 i f v r l a A ip y s E usage_00012.pdb 56 KDETIDIIYIPTYN---QGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 112 usage_00039.pdb 60 KDPNVEVAYVGTQH---PQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 116 usage_00148.pdb 58 KS-SFDLVYIASPN---SLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCF 113 usage_00199.pdb 60 KDPNVEVAYVGTQH---PQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 116 usage_00200.pdb 60 KDPNVEVAYVGTQH---PQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 116 usage_00313.pdb 60 KDPNVEVAYVGTQH---PQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 116 usage_00372.pdb 53 TG-MPDIACIVV--VAGGAGTQLARHFLARGVHVIQEHP-L-HPDDISSLQTLAQEQGCC 107 k y h L Gk V EkP e A g f usage_00012.pdb 113 LE- 114 usage_00039.pdb 117 LME 119 usage_00148.pdb 114 IFE 116 usage_00199.pdb 117 LME 119 usage_00200.pdb 117 LME 119 usage_00313.pdb 117 LME 119 usage_00372.pdb 108 YWI 110 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################