################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:22:47 2021 # Report_file: c_1142_120.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00070.pdb # 5: usage_00071.pdb # 6: usage_00072.pdb # 7: usage_00073.pdb # 8: usage_00557.pdb # 9: usage_00705.pdb # 10: usage_01263.pdb # 11: usage_01346.pdb # 12: usage_01372.pdb # 13: usage_01373.pdb # 14: usage_01374.pdb # 15: usage_01979.pdb # 16: usage_01980.pdb # 17: usage_01981.pdb # 18: usage_01982.pdb # 19: usage_01983.pdb # 20: usage_01984.pdb # 21: usage_01985.pdb # 22: usage_01986.pdb # 23: usage_01987.pdb # 24: usage_01988.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 61 ( 70.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_00048.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_00049.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_00070.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_00071.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_00072.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_00073.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_00557.pdb 1 DY-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 36 usage_00705.pdb 1 --TDVIKRKRGGSPAVTLLIS--------------EKISVDITL--ALES-------K-- 33 usage_01263.pdb 1 -L-----------EREVLWVESP--VDSEQRGEN-DLIKIQIIR--P-KSTEKLPVVMTA 42 usage_01346.pdb 1 DY-----------IKREV--IPR--D-------G-VKLHTVIVL--P-KGAKNAPIVLTR 34 usage_01372.pdb 1 DY-----------TRREEMIPMR--D-------G-VKLNTIILI--P-KGVQNTPIVLTR 36 usage_01373.pdb 1 -------------TRREEMIPMR--D-------G-VKLNTIILI--P-KGVQNTPIVLTR 34 usage_01374.pdb 1 DY-----------TRREEMIPMR--D-------G-VKLNTIILI--P-KGVQNTPIVLTR 36 usage_01979.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_01980.pdb 1 DY-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 36 usage_01981.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_01982.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_01983.pdb 1 DY-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 36 usage_01984.pdb 1 DY-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 36 usage_01985.pdb 1 -Y-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 35 usage_01986.pdb 1 DY-----------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 36 usage_01987.pdb 1 -------------IKREVMVPMR--D-------G-VKLYTVIVI--P-KNARNAPILLTR 34 usage_01988.pdb 1 --------------VTADAPG--AAQ-------GGYSVVTFRVPTES-ETAATTAMTVT- 35 i usage_00047.pdb 35 T 35 usage_00048.pdb - usage_00049.pdb 36 T 36 usage_00070.pdb 35 T 35 usage_00071.pdb 35 T 35 usage_00072.pdb 36 T 36 usage_00073.pdb 36 T 36 usage_00557.pdb 37 T 37 usage_00705.pdb - usage_01263.pdb 43 S 43 usage_01346.pdb 35 T 35 usage_01372.pdb 37 T 37 usage_01373.pdb 35 T 35 usage_01374.pdb 37 T 37 usage_01979.pdb 36 T 36 usage_01980.pdb 37 T 37 usage_01981.pdb 35 T 35 usage_01982.pdb 36 T 36 usage_01983.pdb 37 T 37 usage_01984.pdb 37 T 37 usage_01985.pdb 36 T 36 usage_01986.pdb 37 T 37 usage_01987.pdb 35 T 35 usage_01988.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################