################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:39 2021 # Report_file: c_0033_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00078.pdb # 5: usage_00083.pdb # 6: usage_00084.pdb # 7: usage_00096.pdb # 8: usage_00097.pdb # 9: usage_00098.pdb # 10: usage_00099.pdb # 11: usage_00100.pdb # 12: usage_00101.pdb # 13: usage_00102.pdb # 14: usage_00103.pdb # 15: usage_00104.pdb # # Length: 242 # Identity: 230/242 ( 95.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 230/242 ( 95.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/242 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00029.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00030.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00078.pdb 1 -VMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 59 usage_00083.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00084.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00096.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00097.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00098.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00099.pdb 1 -VMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 59 usage_00100.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00101.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00102.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00103.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 usage_00104.pdb 1 GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV 60 VMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIV usage_00028.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00029.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00030.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00078.pdb 60 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 119 usage_00083.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00084.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00096.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00097.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00098.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00099.pdb 60 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 119 usage_00100.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00101.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00102.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00103.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 usage_00104.pdb 61 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII 120 AEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAII usage_00028.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00029.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00030.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00078.pdb 120 DSADGLPMVVANIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 179 usage_00083.pdb 121 DSADGLPMVVFNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00084.pdb 121 DSADGLPMVVFNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00096.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00097.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00098.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00099.pdb 120 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 179 usage_00100.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00101.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00102.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00103.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 usage_00104.pdb 121 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY 180 DSADGLPMVV NIPALSGVKLTLDQINTLVTLPGVGALQTSGDLYQMEQIRREHPDLVLY usage_00028.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00029.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00030.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00078.pdb 180 NGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 239 usage_00083.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00084.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNK------ 234 usage_00096.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00097.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00098.pdb 181 NGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNK------ 234 usage_00099.pdb 180 NGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN------- 232 usage_00100.pdb 181 NGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN------- 233 usage_00101.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00102.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNK------ 234 usage_00103.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 usage_00104.pdb 181 NGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLI 240 NGYD IFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN usage_00028.pdb 241 KT 242 usage_00029.pdb 241 KT 242 usage_00030.pdb 241 KT 242 usage_00078.pdb 240 KT 241 usage_00083.pdb 241 KT 242 usage_00084.pdb -- usage_00096.pdb 241 KT 242 usage_00097.pdb 241 KT 242 usage_00098.pdb -- usage_00099.pdb -- usage_00100.pdb -- usage_00101.pdb 241 KT 242 usage_00102.pdb -- usage_00103.pdb 241 KT 242 usage_00104.pdb 241 KT 242 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################