################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:55 2021 # Report_file: c_0718_10.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00050.pdb # 9: usage_00106.pdb # 10: usage_00171.pdb # 11: usage_00362.pdb # 12: usage_00363.pdb # 13: usage_00374.pdb # 14: usage_00375.pdb # 15: usage_00423.pdb # # Length: 48 # Identity: 1/ 48 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 48 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 48 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00034.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00045.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00046.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00047.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00048.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00049.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00050.pdb 1 NTVVIFPYGWTAIRFVADNP--GVWAFHCH-IEPHLHMGMGVVFAEG- 44 usage_00106.pdb 1 DFILTPQ--WRWHDHGNPGDEPVIWLDGL-DLPLVNILGCGFAED--- 42 usage_00171.pdb 1 GVWPLLPGSFKTLEMKASKP--GWWLLDTE-VGEIQRAGMQTPFLIV- 44 usage_00362.pdb 1 DTLYVRPQSNFVIRFKADNP--GVWFFHCH-IEWHLLQGLGLVLV--- 42 usage_00363.pdb 1 DTLYVRPQSNFVIRFKADNP--GVWFFHCH-IEWHLLQGLGLVLV--- 42 usage_00374.pdb 1 --LEISPITFLTAQTLLMDL--GQFLLFCH-ISSHQHDGMEAYVKVD- 42 usage_00375.pdb 1 ALYNLYPGVFETVEMLPSKA--GIWRVECL-IGEHLHAGMSTLFLVY- 44 usage_00423.pdb 1 DVFDIFPGTYQTLEMFPRTP--GIWLLHCH-VTDHIHAGMETTYTVLQ 45 p g w G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################