################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:42 2021 # Report_file: c_1479_47.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00056.pdb # 2: usage_00095.pdb # 3: usage_00097.pdb # 4: usage_00126.pdb # 5: usage_00927.pdb # 6: usage_00928.pdb # 7: usage_01081.pdb # 8: usage_01351.pdb # 9: usage_01503.pdb # 10: usage_01547.pdb # 11: usage_01696.pdb # 12: usage_01741.pdb # 13: usage_01763.pdb # # Length: 55 # Identity: 1/ 55 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 55 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 55 ( 76.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 ---------------QMSAFWYAVRTAVINAA---SGRQTVDEALKDAQTGSEL- 36 usage_00095.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDEALKDAQTNAGA- 35 usage_00097.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDEALKDAQTNAGA- 35 usage_00126.pdb 1 YSAQWAEYYRSVG-----KIEEAEAIEKTLKNKQN-------------------- 30 usage_00927.pdb 1 -------------------FWYAVRTAVINAA---SGRQTVDEALKDAQT----- 28 usage_00928.pdb 1 -------------------FWYAVRTAVINAA---SGRQTVDEALKDAQTNAAA- 32 usage_01081.pdb 1 -------------IPQMSAFWYAVRTAVINAA---SGRQTVDEALKDAA------ 33 usage_01351.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDAALAAAQTNAAA- 35 usage_01503.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDEALKDAQTNAAEL 36 usage_01547.pdb 1 ---------------QMSAFWYAVRTAVINAA---SGRQTVDEALKDAQTGSEL- 36 usage_01696.pdb 1 -------------IPQMSAFWYAVRTAVINAA---SGRQTVDEALKDAQTGSG-- 37 usage_01741.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDEALKDAQTN---- 32 usage_01763.pdb 1 ----------------MSAFWYAVRTAVINAA---SGRQTVDEALAAAQTN---- 32 fwyAvrtavinaa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################