################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:52 2021 # Report_file: c_0994_92.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00087.pdb # 2: usage_00116.pdb # 3: usage_00117.pdb # 4: usage_00151.pdb # 5: usage_00285.pdb # 6: usage_00287.pdb # 7: usage_00296.pdb # 8: usage_00300.pdb # 9: usage_00632.pdb # 10: usage_00964.pdb # 11: usage_01060.pdb # # Length: 68 # Identity: 35/ 68 ( 51.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 68 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 68 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGL-----------TEPPFLWMGYE 47 usage_00116.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGL-----------TEPPFLWMGYE 47 usage_00117.pdb 1 -IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGL-----------TEPPFLWMGYE 48 usage_00151.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKK-------------HQ 44 usage_00285.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKKHQKE--PPFLWMGYE 55 usage_00287.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKKHQKE--PPFLWMGYE 55 usage_00296.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKKHQKE--PPFLWMGYE 55 usage_00300.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGL-----------TEPPFLWMGYE 47 usage_00632.pdb 1 -IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKK-HQ---------GYE 48 usage_00964.pdb 1 --VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKE---PPFLWMGYE 55 usage_01060.pdb 1 DIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG-LTTPDKKHQKE--PPFLWMGYE 57 VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWG ye usage_00087.pdb 48 L-H----- 49 usage_00116.pdb 48 L-H----- 49 usage_00117.pdb 49 L-H----- 50 usage_00151.pdb 45 KE-PP--- 48 usage_00285.pdb 56 LH-P---- 58 usage_00287.pdb 56 LH------ 57 usage_00296.pdb 56 LH-PD--- 59 usage_00300.pdb 48 L-HP--DK 52 usage_00632.pdb 49 LH-PD--- 52 usage_00964.pdb 56 ----LH-- 57 usage_01060.pdb 58 LH-PD--- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################