################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:33 2021 # Report_file: c_1296_102.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00228.pdb # 4: usage_00308.pdb # 5: usage_00381.pdb # 6: usage_00382.pdb # 7: usage_00434.pdb # 8: usage_00462.pdb # 9: usage_00819.pdb # 10: usage_00845.pdb # 11: usage_00846.pdb # 12: usage_00847.pdb # 13: usage_00848.pdb # 14: usage_01097.pdb # 15: usage_01098.pdb # 16: usage_01113.pdb # 17: usage_01271.pdb # 18: usage_01316.pdb # 19: usage_01346.pdb # 20: usage_01449.pdb # 21: usage_01530.pdb # 22: usage_01538.pdb # # Length: 48 # Identity: 3/ 48 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 48 ( 52.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 48 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00004.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETK-GQPSVLQVVN 37 usage_00228.pdb 1 TEENARLQLRKASGNI-VTFYTGLALFNSAN----------GHLQTEV 37 usage_00308.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00381.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00382.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00434.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00462.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_00819.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_00845.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_00846.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_00847.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_00848.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_01097.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_01098.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETW-GQPSVLQVVN 37 usage_01113.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETK-GQPSVLQVVN 37 usage_01271.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETK-GQPSVLQVVN 37 usage_01316.pdb 1 DKQTVTSLL-------RAGYKGRVTGW-G--NLRETW-IQPSVLQVVN 37 usage_01346.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETK-GQPSVLQVVN 37 usage_01449.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_01530.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKET-WGQPSVLQVVN 37 usage_01538.pdb 1 DRETAASLL-------QAGYKGRVTGW-G--NLKETK-GQPSVLQVVN 37 d eta slL agykgrvtgw g svLQvvn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################