################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:18 2021 # Report_file: c_1420_12.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00121.pdb # 2: usage_00164.pdb # 3: usage_00165.pdb # 4: usage_00166.pdb # 5: usage_00661.pdb # 6: usage_00662.pdb # 7: usage_00663.pdb # 8: usage_00664.pdb # 9: usage_00666.pdb # # Length: 39 # Identity: 10/ 39 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 39 ( 79.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 39 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00121.pdb 1 PENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEG 39 usage_00164.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00165.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00166.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00661.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00662.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00663.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00664.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQN- 31 usage_00666.pdb 1 AENIMKMSYMYSGS-------NFSFTNSDRLVSWAAQNG 32 aENiMKmSymysgs nfsFtnsDRlVswAaqn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################