################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:39 2021 # Report_file: c_1200_198.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00377.pdb # 5: usage_00378.pdb # 6: usage_02497.pdb # 7: usage_02503.pdb # 8: usage_04495.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 43 ( 16.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 43 ( 65.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 LTIKATGKQWYWSYAYPDNG--KFEFDSLMAQ----------- 30 usage_00037.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 usage_00038.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 usage_00377.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 usage_00378.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 usage_02497.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 usage_02503.pdb 1 -------------DLFRIDSRAWRIAVQQG--EVDDLAFAGYE 28 usage_04495.pdb 1 LTVKTMGHQWYWSYEYTDYE--DLSFDSYM------------- 28 y y d fds m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################