################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:28 2021 # Report_file: c_1484_113.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00164.pdb # 2: usage_00165.pdb # 3: usage_00166.pdb # 4: usage_00830.pdb # 5: usage_00831.pdb # 6: usage_00832.pdb # 7: usage_00833.pdb # 8: usage_00834.pdb # 9: usage_00835.pdb # 10: usage_00837.pdb # 11: usage_01457.pdb # 12: usage_02920.pdb # 13: usage_03843.pdb # 14: usage_04058.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 57 ( 70.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00164.pdb 1 -------TKVWQTIVAEAREQAEQE--P----------MLASFYHATI--------- 29 usage_00165.pdb 1 -----AHTKVWQTIVAEAREQAEQE--P----------MLASFYHATI--------- 31 usage_00166.pdb 1 -----AHTKVWQTIVAEAREQAEQE--P----------MLASFYHATI---IK---- 33 usage_00830.pdb 1 ---SEELEQVWSNIKSEARALAECE--P----------MLASFFHATL---LKH--- 36 usage_00831.pdb 1 --SSEELEQVWSNIKSEARALAECE--P----------MLASFFHATL---LK---- 36 usage_00832.pdb 1 --SSEELEQVWSNIKSEARALAECE--P----------MLASFFHAT---------- 33 usage_00833.pdb 1 --SSEELEQVWSNIKSEARALAECE--P----------MLASFFHAT---------- 33 usage_00834.pdb 1 ----EELEQVWSNIKSEARALAECE--P----------MLASFFHAT---------- 31 usage_00835.pdb 1 --SSEELEQVWSNIKSEARALAECE--P----------MLASFFHAT---------- 33 usage_00837.pdb 1 --SSEELEQVWSNIKSEARALAECE--P----------MLASFFHATL---LKH--- 37 usage_01457.pdb 1 --SCEELEIVWNNIKAEARTLADCE--P----------LASFYH-AT---------- 32 usage_02920.pdb 1 PNLSFYYNECERFESFLKNH--------HLHLESFHPYLEKAFFEMVL---N----- 41 usage_03843.pdb 1 -----------MPPLIQKWNMLK--DED----------KDLFPLLECLSSVA-TALQ 33 usage_04058.pdb 1 ------SQEEAHGKLVLWSGL-RNA--P----------RCWAVIQPLL---C-AV-- 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################