################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:05 2021 # Report_file: c_1084_200.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00036.pdb # 2: usage_00444.pdb # 3: usage_00938.pdb # 4: usage_00939.pdb # 5: usage_00940.pdb # 6: usage_01536.pdb # 7: usage_01537.pdb # 8: usage_01547.pdb # 9: usage_01560.pdb # 10: usage_01620.pdb # 11: usage_01896.pdb # # Length: 59 # Identity: 4/ 59 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 59 ( 25.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 59 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 --DSYTKKAKAFKKEAEQLTEEYTQKFKKVR--SKTFVTQHTAFSYLAKRFGLKQLGIS 55 usage_00444.pdb 1 -KADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYI- 57 usage_00938.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAY-- 56 usage_00939.pdb 1 NKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAY-- 57 usage_00940.pdb 1 -KEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAY-- 56 usage_01536.pdb 1 -ADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYI- 57 usage_01537.pdb 1 -AKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLY-- 56 usage_01547.pdb 1 -ADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYI- 57 usage_01560.pdb 1 NKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAY-- 57 usage_01620.pdb 1 -ADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYI- 57 usage_01896.pdb 1 HKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYI- 58 Y y l k kf Tsegaf Y G y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################