################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:21 2021 # Report_file: c_0958_182.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01062.pdb # 2: usage_01063.pdb # 3: usage_01190.pdb # 4: usage_01371.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 68 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 68 ( 66.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01062.pdb 1 ---------PVDINTESSTCS--DAEVVNMDQ-E----MGTSIKISK-----IAANDAG- 38 usage_01063.pdb 1 ---------PVDINTESS--S--DAEVVNMDQ-E----MGTSIKISK-----IAANDAG- 36 usage_01190.pdb 1 ---------EVIHSA------TGDYRIRKEM-TE---KG-NYILEMR-----K--DDWTL 33 usage_01371.pdb 1 WVTFPQVDG--------------QWEELSGLD-EEQH-SVRTYEV-CDVQRA--PG--Q- 38 d e E i usage_01062.pdb 39 ALAFTIE- 45 usage_01063.pdb 37 ALAFTIE- 43 usage_01190.pdb 34 GYAFYI-E 40 usage_01371.pdb 39 AHWLR--- 43 a af #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################