################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:49 2021 # Report_file: c_0173_20.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00011.pdb # 2: usage_00025.pdb # 3: usage_00095.pdb # 4: usage_00204.pdb # 5: usage_00226.pdb # 6: usage_00232.pdb # 7: usage_00307.pdb # 8: usage_00308.pdb # 9: usage_00309.pdb # 10: usage_00310.pdb # 11: usage_00325.pdb # 12: usage_00326.pdb # 13: usage_00327.pdb # 14: usage_00328.pdb # 15: usage_00368.pdb # 16: usage_00370.pdb # 17: usage_00371.pdb # 18: usage_00373.pdb # 19: usage_00374.pdb # 20: usage_00379.pdb # 21: usage_00383.pdb # 22: usage_00386.pdb # 23: usage_00409.pdb # # Length: 210 # Identity: 4/210 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/210 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/210 ( 24.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -VAVITGGASGIGLATGRRLRAEG-------ATVVVGDI--DPTTGKAAADELE------ 44 usage_00025.pdb 1 -ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR--TAADLEKISLECRA--EGA 55 usage_00095.pdb 1 KVALVTGASRGIGRAIAIDLAKQG-------ANVVVNYAG-NEQKANEVVDEIKK--LGS 50 usage_00204.pdb 1 KTALVTGASRGIGRAIAEKLGYAG-------ALVAVHYAT-GADAAAEVAESIEK--DGG 50 usage_00226.pdb 1 KVCLVTGAGGNIGLATALRLAEEG-------TAIALLDM--NREALEKAEASVRE--KGV 49 usage_00232.pdb 1 -VVVITGGSTGLGRAMAVRFGQEE-------AKVVINYYN-NEEEALDAKKEVEE--AGG 49 usage_00307.pdb 1 QVALVTGASRGIGKATALALAATG-------MKVVVNYAQ-SSTAADAVVAEIIA--NGG 50 usage_00308.pdb 1 KVCAVFGGSRGIGRAVAQLMARKG-------YRLAVIAR--NLEGAKAAAGDL------- 44 usage_00309.pdb 1 ALALVTGAGSGIGRAVSVRLAGEG-------ATVAACDL--DRAAAQETVRLL------- 44 usage_00310.pdb 1 KVCAVFGGSRGIGRAVAQLMARKG-------YRLAVIAR--NLEGAKAAAGDLG-----G 46 usage_00325.pdb 1 RIALVTGASRGIGRAIALELAAAG-------AKVAVNYAS-SAGAADEVVAAIAA--AGG 50 usage_00326.pdb 1 RIALVTGASRGIGRAIALELAAAG-------AKVAVNYAS-SAGAADEVVAAIAA--AGG 50 usage_00327.pdb 1 RIALVTGASRGIGRAIALELAAAG-------AKVAVNYAS-SAGAADEVVAAIAA--AGG 50 usage_00328.pdb 1 RIALVTGASRGIGRAIALELAAAG-------AKVAVNYAS-SAGAADEVVAAIAA--AGG 50 usage_00368.pdb 1 KVAIVTGAARGIGATIAEVFARDG-------AHVVAIDVESAAENLAETASKV------- 46 usage_00370.pdb 1 -VALVTGAASGIGAATARLMAQEG-------AFVVLADV--DEHAGQALARELR------ 44 usage_00371.pdb 1 RVALVTGAASGIGAATARLMAQEG-------AFVVLADV--DEHAGQALARELR------ 45 usage_00373.pdb 1 KKALVTGGSRGVGRGVVLALARAG-------VDVFTCYRE-ESDASASLARELKQ--LGG 50 usage_00374.pdb 1 KKALVTGGSRGVGRGVVLALARAG-------VDVFTCYRE-ESDASASLARELKQ--LGG 50 usage_00379.pdb 1 -LALVTGAGSGIGRAVSVRLAGEG-------ATVAACDL--DRAAAQETVRLL------- 43 usage_00383.pdb 1 KTALVTGSTAGIGKAIATSLVAEG-------ANVLINGR--REENVNETIKEIRAQYPDA 51 usage_00386.pdb 1 ATVAVIGAGDYIGAEIAKKFAAEG-------FTVFAGRR--NGEKLAPLVAEIEA--AGG 49 usage_00409.pdb 1 EVALVTGATSGIGLEIARRLGKEG-------LRVFVCAR--GEEGLRTTLKELRE--AGV 49 G G usage_00011.pdb 45 -GLFVPVDVSEQEAVDNLFDTAASTFG------RVDIAFNN-A-GISPPEDDLIENTDLP 95 usage_00025.pdb 56 LTDTITADISDMADVRRLTTHIVERYG------HIDCLVNN-A-GVGRF--GALSDLTEE 105 usage_00095.pdb 51 DAIAVRADVANAEDVTNMVKQTVDVFG------QVDILVNN-A-GVTKD--NLLMRMKEE 100 usage_00204.pdb 51 RAFTVKAELGVPGDVDVLFEGLERGLKERTGATDLDILVNN-A-GVMAM--GAPEEVTPE 106 usage_00226.pdb 50 EARSYVCDVTSEEAVIGTVDSVVRDFG------KIDFLFNNAG-YQGAF--APVQDYPSD 100 usage_00232.pdb 50 QAIIVQGDVTKEEDVVNLVQTAIKEFG------TLDVMINN-A-GVENP--VPSHELSLD 99 usage_00307.pdb 51 EAIAVQANVANADEVDQLIKTTLDKFS------RIDVLVNN-A-GITRD--TLLLRMKLE 100 usage_00308.pdb 45 -GGAFSCDVAKEHDVQNTFEELEKHLG------RVNFLVNA-A-GINRD--GLLVRTKTE 93 usage_00309.pdb 45 NHAAFQADVSEARAARCLLEQVQACFS-----RPPSVVVSC-A-GITQD--EFLLHMSED 95 usage_00310.pdb 47 DHLAFSCDVAKEHDVQNTFEELEKHLG------RVNFLVNA-A-GINRD--GLLVRTKTE 96 usage_00325.pdb 51 EAFAVKADVSQESEVEALFAAVIERWG------RLDVLVNN-A-GITRD--TLLLRMKRD 100 usage_00326.pdb 51 EAFAVKADVSQESEVEALFAAVIERWG------RLDVLVNN-A-GITRD--TLLLRMKRD 100 usage_00327.pdb 51 EAFAVKADVSQESEVEALFAAVIERWG------RLDVLVNN-A-GITRD--TLLLRMKRD 100 usage_00328.pdb 51 EAFAVKADVSQESEVEALFAAVIERWG------RLDVLVNN-A-GITRD--TLLLRMKRD 100 usage_00368.pdb 47 GGTALWLDVTADDAVDKISEHLRDHHG-----GKADILVNN-A-GITRD--KLLANMDDA 97 usage_00370.pdb 45 DATFAYTDVSVEAQVAAAVDEALRLHG------RLDCMVNN-AGFVGAY--GSILETSAA 95 usage_00371.pdb 46 DATFAYTDVSVEAQVAAAVDEALRLHG------RLDCMVNN-AGFVGAY--GSILETSAA 96 usage_00373.pdb 51 DHHALRADLADPKQIAELFQEVGRRFG------TLDVVVNN-A-GVISH--VPYAELPVA 100 usage_00374.pdb 51 DHHALRADLADPKQIAELFQEVGRRFG------TLDVVVNN-A-GVISH--VPYAELPVA 100 usage_00379.pdb 44 NHAAFQADVSEARAARCLLEQVQACFS-----RPPSVVVSC-A-GITQD--EFLLHMSED 94 usage_00383.pdb 52 ILQPVVADLGTEQGCQDVIEKYP----------KVDILINN-L-GIFEP--VEYFDIPDE 97 usage_00386.pdb 50 RIVARSLDARNEDEVTAFLNAADAHA-------PLEVTIFN-V-GANVN--FPILETTDR 98 usage_00409.pdb 50 EADGRTCDVRSVPEIEALVAAVVERYG------PVDVLVNN-A-GRPGG--GATAELADE 99 usage_00011.pdb 96 AWQRVQDINLKSVYLSCRAALR--HM---V-P-AGKGSIINTASFVAVMGSATSQISYTA 148 usage_00025.pdb 106 DFDYTMNTNLKGTFFLTQALFA--LM---E-R-QHSGHIFFITSVAATKAFRH-SSIYCM 157 usage_00095.pdb 101 EWDTVINTNLKGVFLCTKAVSR--FM---M-R-QRHGRIVNIASVVGVTGNPG-QANYVA 152 usage_00204.pdb 107 MFDRMMAVNAKAPFFIVQRALS--VM-------PDGGRIINVSSGLTRVASPD-QVTYGM 156 usage_00226.pdb 101 DFARVLTINVTGAFHVLKAVSR--QM---I-T-QNYGRIVNTASMAGVKGPPN-MAAYGT 152 usage_00232.pdb 100 NWNKVIDTNLTGAFLGSREAIK--YF---V-ENDIKGNVINMSSVHEMIPWPL-FVHYAA 152 usage_00307.pdb 101 DWQAVIDLNLTGVFLCTKAVSK--LM---L-K-QKSGRIINITSVAGMMGNPG-QANYSA 152 usage_00308.pdb 94 DMVSQLHTNLLGSMLTCKAAMR--TM---IQ-----GSIVNVGSIVGLKGNSG-QSVYSA 142 usage_00309.pdb 96 DWDKVIAVNLKGTFLVTQAAAQ--AL---V-SNGCRGSIINISSIVGKVGNVG-QTNYAA 148 usage_00310.pdb 97 DMVSQLHTNLLGSMLTCKAAMR--TM---I-Q-QQGGSIVNVGSIVGLKGNSG-QSVYSA 148 usage_00325.pdb 101 DWQSVLDLNLGGVFLCSRAAAK--IM---L-K-QRSGRIINIASVVGEMGNPG-QANYSA 152 usage_00326.pdb 101 DWQSVLDLNLGGVFLCSRAAAK--IM---L-K-QRSGRIINIASVVGEMGNPG-QANYSA 152 usage_00327.pdb 101 DWQSVLDLNLGGVFLCSRAAAK--IM---L-K-QRSGRIINIASVVGEMGNPG-QANYSA 152 usage_00328.pdb 101 DWQSVLDLNLGGVFLCSRAAAK--IM---L-K-QRSGRIINIASVVGEMGNPG-QANYSA 152 usage_00368.pdb 98 RWDAVLAVNLLAPLRLTEGLVG--NGSIG-----EGGRVIGLSSIAGIAGNRG-QTNYAT 149 usage_00370.pdb 96 AWHATLGVLLDGVFYGIKHAAR--AM---V-K-QGSGCILSVASTAGVMGGLG-PHAYTS 147 usage_00371.pdb 97 AWHATLGVLLDGVFYGIKHAAR--AM---V-K-QGSGCILSVASTAGVMGGLG-PHAYTS 148 usage_00373.pdb 101 EWQRIVDVNLTGAHLVIQHAIP--LL---G----DKGSVISIGSKSSEVGIPL-RAHYTA 150 usage_00374.pdb 101 EWQRIVDVNLTGAHLVIQHAIP--LL---G----DKGSVISIGSKSSEVGIPL-RAHYTA 150 usage_00379.pdb 95 DWDKVIAVNLKGTFLVTQAAAQ--AL---V-SNGCRGSIINISSIVGKVGNVG-QTNYAA 147 usage_00383.pdb 98 DWFKLFEVNI-SGVRLTRSYLK--K----I-E-RKEGRVIFIASEAAIP-SQ--EAHYSA 145 usage_00386.pdb 99 VFRKVWEMACWAGFVSGRESAR--LM---L-A-HGQGKIFFTGATASLRGGSG-FAAFAS 150 usage_00409.pdb 100 LWLDVVETNLTGVFRVTKQVLKAGGM---L-E-RGTGRIVNIASTGGKQGLVH-AAPYSA 153 G s y usage_00011.pdb 149 SKGGVLAMSRELGVQYARQGIRVNALCPG- 177 usage_00025.pdb 158 SKFGQRGLVETMRLYARKCNVRITDVQPG- 186 usage_00095.pdb 153 AKAGVIGLTKTSAKELASRNITVNAIAPG- 181 usage_00204.pdb 157 SKGALEQIALHFSRHLGSRRITVNSVAPG- 185 usage_00226.pdb 153 SKGAIIALTETAALDLAPYNIRVNAISPG- 181 usage_00232.pdb 153 SKGGMKLMTETLALEYAPKGIRVNNIGPG- 181 usage_00307.pdb 153 AKAGVIGFTKTVAKELASRGVTVNAVAPG- 181 usage_00308.pdb 143 SKGGLVGFSRALAKEVARKKIRVNVVAPG- 171 usage_00309.pdb 149 SKAGVIGLTQTAARELGRHGIRCNSVLPG- 177 usage_00310.pdb 149 SKGGLVGFSRALAKEVARKKIRVNVVAPG- 177 usage_00325.pdb 153 AKAGVIGLTKTVAKELASRGITVNAVAPG- 181 usage_00326.pdb 153 AKAGVIGLTKTVAKELASRGITVNAVAPG- 181 usage_00327.pdb 153 AKAGVIGLTKTVAKELASRGITVNAVAPG- 181 usage_00328.pdb 153 AKAGVIGLTKTVAKELASRGITVNAVAPG- 181 usage_00368.pdb 150 TKAGMIGITQALAPGLAAKGITINAVAPGF 179 usage_00370.pdb 148 AKHAVIGLTRSAASELAPRGVRVNAVAPG- 176 usage_00371.pdb 149 AKHAVIGLTRSAASELAPRGVRVNAVAPG- 177 usage_00373.pdb 151 TKHALRGLTRSLAKEYGRSGLRFNVLALG- 179 usage_00374.pdb 151 TKHALRGLTRSLAKEYGRSGLRFNVLALG- 179 usage_00379.pdb 148 SKAGVIGLTQTAARELGRHGIRCNSVLPG- 176 usage_00383.pdb 146 TKT-QLSLSRSLAELTTGTNVTVNTIPG-- 172 usage_00386.pdb 151 AKFGLRAVAQSMARELMPKNIHVAHLIID- 179 usage_00409.pdb 154 SKHGVVGFTKALGLELARTGITVNAVCPG- 182 K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################