################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:02 2021 # Report_file: c_0777_39.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00312.pdb # 3: usage_00961.pdb # 4: usage_01074.pdb # 5: usage_01075.pdb # 6: usage_01076.pdb # 7: usage_01077.pdb # 8: usage_01078.pdb # 9: usage_01079.pdb # 10: usage_01443.pdb # 11: usage_01498.pdb # # Length: 95 # Identity: 14/ 95 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 95 ( 23.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 95 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -GINMGNALEAP-------------VEGS-WGVYIEDEYFKIIKERGFDSVRIPIRWSAH 45 usage_00312.pdb 1 -GWNLGNQMD---------------------NKAATQQTFNGLAKAGFRSVRIPVTWMGH 38 usage_00961.pdb 1 LGFNLGNTLDANGCGTGKPVAT---YETFWGQPETTQDMMTFLMQNGFNAVRIPVTWYEH 57 usage_01074.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01075.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01076.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01077.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01078.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01079.pdb 1 RGINIGNALEAP-------------NEGD-WGVVIKDEFFDIIKEAGFSHVRIPIRWSTH 46 usage_01443.pdb 1 -GWNLGNQMDAHYD--------GCSYETGWGNKAATQQTFNGLAKAGFRSVRIPVTWMGH 51 usage_01498.pdb 1 -GTNLGNTLEAP-------------YEGS-WSKSAMEYYFDDFKAAGYKNVRIPVRWDNH 45 G N GN f Gf VRIP W H usage_00001.pdb 46 ISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINC 80 usage_00312.pdb 39 IGNAPTYAIERGWLDRVDELVHMAHKAGLIVIINI 73 usage_00961.pdb 58 MDA-E-GNVDEAWMMRVKAIVEYAMNAGLYAIVNV 90 usage_01074.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01075.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01076.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01077.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01078.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01079.pdb 47 AYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINI 81 usage_01443.pdb 52 IGNAPTYAIERGWLDRVDELVHMAHKAGLIVIINI 86 usage_01498.pdb 46 TMRTYPYTIDKAFLDRVEQVVDWSLSRGFVTIIN- 79 y i RV a gl iN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################