################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:58 2021 # Report_file: c_1263_26.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00176.pdb # 2: usage_00177.pdb # 3: usage_00178.pdb # 4: usage_00179.pdb # 5: usage_00197.pdb # 6: usage_00263.pdb # 7: usage_00264.pdb # 8: usage_00880.pdb # 9: usage_00881.pdb # 10: usage_00882.pdb # # Length: 30 # Identity: 7/ 30 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 30 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 30 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00177.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00178.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00179.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00197.pdb 1 DFVIGCDGAYSATRSQMQRKVEMDFSQEY- 29 usage_00263.pdb 1 RLVIGADGANSWLRNKADI---PLTFWDYQ 27 usage_00264.pdb 1 RLVIGADGANSWLRNKADI---PLTFWDYQ 27 usage_00880.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00881.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 usage_00882.pdb 1 KYVIGCDGGHSWVRRTLGF---EMIGEQTD 27 VIG DG Sw R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################