################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:35 2021 # Report_file: c_1413_101.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00586.pdb # 2: usage_00587.pdb # 3: usage_00729.pdb # 4: usage_00821.pdb # 5: usage_00822.pdb # 6: usage_00823.pdb # 7: usage_00828.pdb # 8: usage_01187.pdb # 9: usage_01188.pdb # 10: usage_01189.pdb # 11: usage_01424.pdb # 12: usage_01425.pdb # # Length: 39 # Identity: 11/ 39 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 39 ( 51.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 39 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00586.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_00587.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_00729.pdb 1 TCLMKALLNINPNT--KEIVRILLAFAEENDILDRFINA 37 usage_00821.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_00822.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_00823.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_00828.pdb 1 -CLLKA-LNLHN--GQNDTIALLLDVARKTDSLKQFVNA 35 usage_01187.pdb 1 -CLPKALLNLSN--GRNDTIPVLLDIAERTGNMREFINS 36 usage_01188.pdb 1 -CLPKALLNLSN--GRNDTIPVLLDIAERTGNMREFINS 36 usage_01189.pdb 1 -CLPKALLNLSN--GRNDTIPVLLDIAERTGNMREFINS 36 usage_01424.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 usage_01425.pdb 1 -CLPKALLNLSA--GRNDTIPILLDIAEKTGNMREFINS 36 CL KA LNl ndti LLd Ae t FiN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################