################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:52:43 2021 # Report_file: c_0209_6.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00029.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # 6: usage_00091.pdb # 7: usage_00092.pdb # 8: usage_00095.pdb # 9: usage_00098.pdb # 10: usage_00100.pdb # 11: usage_00122.pdb # 12: usage_00137.pdb # 13: usage_00174.pdb # 14: usage_00184.pdb # 15: usage_00193.pdb # 16: usage_00201.pdb # 17: usage_00208.pdb # 18: usage_00209.pdb # 19: usage_00210.pdb # 20: usage_00234.pdb # 21: usage_00282.pdb # 22: usage_00283.pdb # 23: usage_00284.pdb # 24: usage_00285.pdb # 25: usage_00286.pdb # 26: usage_00294.pdb # 27: usage_00295.pdb # 28: usage_00354.pdb # 29: usage_00380.pdb # # Length: 114 # Identity: 13/114 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/114 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/114 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -IQMTQSPASQSASLGESVTITCLASQTI-GT-WLAWYQQKPGKSPQLLIYAATSLADGV 57 usage_00027.pdb 1 -IQMTQSPASQSASLGESVTITCLASQTI-GT-WLAWYQQKPGKSPQLLIYAATSLADGV 57 usage_00029.pdb 1 --QMTQSPASLSASVGETVTITCRTSENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 56 usage_00044.pdb 1 -LQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 57 usage_00045.pdb 1 -LQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 57 usage_00091.pdb 1 -IQMTQSPASLSASVGETVTITCRASGNI-YN-YLAWYQQKQGKSPQLLVYNAKTLADGV 57 usage_00092.pdb 1 --QMTQSPASLSASVGETVTITCRASGNI-YN-YLAWYQQKQGKSPQLLVYNAKTLADGV 56 usage_00095.pdb 1 DIQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 58 usage_00098.pdb 1 --QMTQSPASLSASVGETVTITCRASGNI-HN-YLAWYQQKQGKSPQLLVYNAKTLADGV 56 usage_00100.pdb 1 -IVLTQSPASLSASVGETVTITCRASGNI-HN-YLAWYQQKQGKSPQLLVYYTTTLADGV 57 usage_00122.pdb 1 --VMTQSPASLSASVGDTVTITCRASEFI-YS-SLTWYQQKQGGSPQLLVYAATNLADAV 56 usage_00137.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNI-HN-YLAWYQQKQGKSPQLLVYNAKTLADGV 58 usage_00174.pdb 1 DIQMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLAEGV 58 usage_00184.pdb 1 -IVMTQTPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAETLAEGV 57 usage_00193.pdb 1 ELQVIQPEKSVSVAAGESATLRCAMTSLIP-VGPIMWFRGAGA-GRELIYNQ-KE---GH 54 usage_00201.pdb 1 -IQMTQSPASQSASLGESVTITCLASQTI-GT-WLAWYQQKPGKSPQLLIYAATSLADGV 57 usage_00208.pdb 1 -LQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 57 usage_00209.pdb 1 -LQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 57 usage_00210.pdb 1 -LQMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLAEGV 57 usage_00234.pdb 1 -IELTQTPVSLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQFLVYNAKTLGEGV 57 usage_00282.pdb 1 -IQMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLTEGV 57 usage_00283.pdb 1 -IQMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLTEGV 57 usage_00284.pdb 1 -IQMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLTEGV 57 usage_00285.pdb 1 -IQMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLTEGV 57 usage_00286.pdb 1 --QMTQSPASLSASVGETVTITCRASENI-YS-YLTWYQQKQGKSPQLLVYNAKTLTEGV 56 usage_00294.pdb 1 DIQLTQSPASLSASVGETVTITCRASGNI-HN-YLAWYQQKQGKSPQLLVYNAKTLADGV 58 usage_00295.pdb 1 DIQLTQSPASLSASVGETVTITCRASGNI-HN-YLAWYQQKQGKSPQLLVYNAKTLADGV 58 usage_00354.pdb 1 --QMTQSPASLSASVGETVTITCRASENI-YS-YLAWYQQKQGKSPQLLVYNAKTLIEGV 56 usage_00380.pdb 1 -IQVTQSPASLSASLEEIVTITCQASQDI-GN-YLSWYQQKLGKSPQLLIHSATSLADGV 57 tQ p S Sas ge vTitC s I l Wyqqk g spqll gv usage_00026.pdb 58 PSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLY--STP---WTFGGGTRLEI- 105 usage_00027.pdb 58 PSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLY--STP---WTFGGGTRLEI- 105 usage_00029.pdb 57 PSRFSGSGSGTQFSLKINSLQPEDFGSYSCQHKY--GTP---WTFGGGTKLEI- 104 usage_00044.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHY--GTP---LTFGAGTKLEL- 105 usage_00045.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHY--GTP---LTFGAGTKLEL- 105 usage_00091.pdb 58 PSRFSGSGSGTQYSLKINSLQPEDFGSYFCQHFW--DTP---WTFGGGTKLEI- 105 usage_00092.pdb 57 PSRFSGSGSGTQYSLKINSLQPEDFGSYFCQHFW--DTP---WTFGGGTKLEI- 104 usage_00095.pdb 59 PSRFSGSGSGTQFSLKINNLQPEDFGSYYCQHHY--VTP---VTFGAGTKLDL- 106 usage_00098.pdb 57 PSRFSGSESGTQYSLKINSLQPEDFGSYYCQHFW--STP---FTFGSGTKLEL- 104 usage_00100.pdb 58 PSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFA--STP---RTFGGGTKLEI- 105 usage_00122.pdb 57 PSRFSGSGSGTQFSLKINRLQPEDFGTYYCQHFY--GST---WAFGGGTKLEI- 104 usage_00137.pdb 59 PSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFW--STP---RTFGGGTKLEI- 106 usage_00174.pdb 59 PSRFSGSGSGTQFSLKISSLQPEDFGNYYCQHHY--GTR---TFGGGTRLEI-- 105 usage_00184.pdb 58 PSRFSGSGSGTQFSLRINSLQPEDFGSYYCQHHY--VSP---LTFGAGTKLEL- 105 usage_00193.pdb 55 FPRVTTV--NLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV- 105 usage_00201.pdb 58 PSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLY--STP---WTFGGGTKLEI- 105 usage_00208.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHY--GTP---LTFGAGTKLEL- 105 usage_00209.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHY--GTP---LTFGAGTKLEL- 105 usage_00210.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHY--GTP---LTFGAGTKLEL- 105 usage_00234.pdb 58 PSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHY--GTP---PLTFGGGTKLEI 106 usage_00282.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGGYFCQHHY--GTP---PTFGGGTKLEV- 105 usage_00283.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGGYFCQHHY--GTP---PTFGGGTKLEV- 105 usage_00284.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGGYFCQHHY--GTP---PTFGGGTKLEV- 105 usage_00285.pdb 58 PSRFSGSGSGTQFSLKINSLQPEDFGGYFCQHHY--GTP---PTFGGGTKLEV- 105 usage_00286.pdb 57 PSRFSGSGSGTQFSLKINSLQPEDFGGYFCQHHY--GTP---PTFGGGTKLEV- 104 usage_00294.pdb 59 PSRFSGSGSGTQYSLKINSLQPEDFGNYYCQHFW--STP---WTFGGGTKLEL- 106 usage_00295.pdb 59 PSRFSGSGSGTQYSLKINSLQPEDFGNYYCQHFW--STP---WTFGGGTKLEL- 106 usage_00354.pdb 57 PSRFSGSGSGTQFSLKINSLQPEDFGSYFCQHHF--GTP---FTFGSGTELEI- 104 usage_00380.pdb 58 PSRFSGSRSGTQYSLKINRLQVEDTGIYYCLQHY--STP---YTFGAGTKLEL- 105 psRfsgs gt S I l eD Y C g g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################