################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:51 2021 # Report_file: c_0612_112.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00374.pdb # 2: usage_00445.pdb # 3: usage_00495.pdb # 4: usage_00724.pdb # 5: usage_00995.pdb # 6: usage_01011.pdb # 7: usage_01012.pdb # # Length: 89 # Identity: 12/ 89 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 89 ( 51.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 89 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00374.pdb 1 SDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFI 60 usage_00445.pdb 1 SDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFDGLKNLNTDYGFADGARPFI 60 usage_00495.pdb 1 --YVRSKIAEYMNHLIDIGVAGFALDASKHMWPGDIKAILDKLHNLNSNWF-PAGSKPFI 57 usage_00724.pdb 1 NATIDKYFKDAIKLWLDMGVDGIRVDAVKHMPLGWQKSWMSSIY----A-----HKPVFT 51 usage_00995.pdb 1 SDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFI 60 usage_01011.pdb 1 --YVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWF-PEGSKPFI 57 usage_01012.pdb 1 --YVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWF-PEGSKPFI 57 yvr ymnh iD GVaGfr DA KHM pGd i l g pFi usage_00374.pdb 61 YQEVIDLGGEAI-SKNE-YT-GFGCVLEF 86 usage_00445.pdb 61 YQEVIDLGGEAI-SKNE-YT-GFGCVLEF 86 usage_00495.pdb 58 YQEVIDLGGEPI-KSSD-YF-GNGRVTEF 83 usage_00724.pdb 52 FGAWFLGSAASDADNTDFANKSGMSLLDF 80 usage_00995.pdb 61 YQEVIDLGGEAI-SKNE-YT-GFGCVLEF 86 usage_01011.pdb 58 YQEVIDLGGEPI-KSSD-YF-GNGRVTEF 83 usage_01012.pdb 58 YQEVIDLGGEPI-KSSD-YF-GNGRVTEF 83 yqevidlgge i y g g v eF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################