################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:49 2021 # Report_file: c_1431_93.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00228.pdb # 4: usage_00245.pdb # 5: usage_00559.pdb # 6: usage_00560.pdb # 7: usage_00561.pdb # 8: usage_00658.pdb # 9: usage_00810.pdb # 10: usage_01109.pdb # # Length: 68 # Identity: 11/ 68 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 68 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 68 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 LEPYISKEINDLHINKHHVAYVNGYNAAIDALEKAVGKRDLKSVVEIQQNIKFHGGGHTN 60 usage_00013.pdb 1 LEPYISKEINDLHINKHHVAYVNGYNAAIDALEKAVGKRDLKSVVEIQQNIKFHGGGHTN 60 usage_00228.pdb 1 LEPHIDKETMTIHHTKHHNTYVTNLNKAVE-------------------------GNTAL 35 usage_00245.pdb 1 LEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHIN 60 usage_00559.pdb 1 LQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHIN 60 usage_00560.pdb 1 LQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHIN 60 usage_00561.pdb 1 LQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHIN 60 usage_00658.pdb 1 LEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHIN 60 usage_00810.pdb 1 LEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNGGGHIN 60 usage_01109.pdb 1 LEPYISKEINDLHINKHHVAYVNGYNAAIDALEKAVGKRDLKSVVEIQQNIKFHGGGHTN 60 L P I i lH KHH YVn N Ggh n usage_00012.pdb 61 HSLFWKN- 67 usage_00013.pdb 61 HSLFWKN- 67 usage_00228.pdb 36 ANKS---- 39 usage_00245.pdb 61 HSIFWTN- 67 usage_00559.pdb 61 HSLFWKN- 67 usage_00560.pdb 61 HSLFWKN- 67 usage_00561.pdb 61 HSLFWKNL 68 usage_00658.pdb 61 HSIFWTN- 67 usage_00810.pdb 61 HSIFWTN- 67 usage_01109.pdb 61 HSLFWKNL 68 hs f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################