################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:20 2021 # Report_file: c_1200_142.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00611.pdb # 2: usage_00612.pdb # 3: usage_01011.pdb # 4: usage_01489.pdb # 5: usage_03577.pdb # 6: usage_04055.pdb # 7: usage_04128.pdb # 8: usage_04174.pdb # 9: usage_04176.pdb # 10: usage_04647.pdb # 11: usage_04734.pdb # 12: usage_04789.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 65 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 65 ( 53.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00611.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRSIRGFATKFYTE---------EGIFDL 41 usage_00612.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRSIRGFATKFYTE---------EGIFDL 41 usage_01011.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRDIRGFATKFYTE---------EGIFDL 41 usage_01489.pdb 1 ---SYVQSKGK-Q---------------LNGAGGSADLAKYIQAGATYYFNKNMNVWVDY 41 usage_03577.pdb 1 ---D-KVIPVAGHDSLNVGGA---------HSPYFTRNIVILTDN---------SGHTGV 38 usage_04055.pdb 1 STVPALIRFSNGS--------GNPKQRD--GAPGVRGMAVKFTLP---------DGSTTD 41 usage_04128.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRDIRGFATKFYTE---------EGIFDL 41 usage_04174.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRDIRGFATKFYTE---------EGIFDL 41 usage_04176.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRDIRGFATKFYTE---------EGIFDL 41 usage_04647.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRQIRGFATKFYTE---------EGIFDL 41 usage_04734.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRNIRGFATKFYTE---------EGIFDL 41 usage_04789.pdb 1 KITPVFVRFSTVQ--------GGAGSAD--TVRDIRGFATKFYTE---------EGIFDL 41 a g usage_00611.pdb 42 VG--- 43 usage_00612.pdb 42 VG--- 43 usage_01011.pdb 42 VGNNT 46 usage_01489.pdb 42 RFN-- 44 usage_03577.pdb 39 -GEAP 42 usage_04055.pdb 42 VSAQT 46 usage_04128.pdb 42 VGNN- 45 usage_04174.pdb 42 VGNNT 46 usage_04176.pdb 42 VGNNT 46 usage_04647.pdb 42 VG--- 43 usage_04734.pdb 42 VG--- 43 usage_04789.pdb 42 VGHNT 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################