################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:33 2021 # Report_file: c_1023_94.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00054.pdb # 9: usage_00055.pdb # 10: usage_00056.pdb # 11: usage_00057.pdb # 12: usage_00058.pdb # 13: usage_00229.pdb # 14: usage_00230.pdb # 15: usage_00231.pdb # 16: usage_00656.pdb # 17: usage_00903.pdb # 18: usage_00904.pdb # 19: usage_00906.pdb # 20: usage_00908.pdb # 21: usage_01145.pdb # # Length: 57 # Identity: 9/ 57 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 57 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 57 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00048.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00049.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00050.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00051.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00052.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00053.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00054.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00055.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00056.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00057.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00058.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_00229.pdb 1 VT-LFTAGGI----ATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATT-- 50 usage_00230.pdb 1 VT-LFTAGGI----ATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTF- 51 usage_00231.pdb 1 VT-LFTAGGI----ATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTF- 51 usage_00656.pdb 1 --EILCPGI-GAQKGSIEA-----VKYADGIIVGRGIYASGNPAEEARKLRRV-LK- 47 usage_00903.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHY 52 usage_00904.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATT-- 50 usage_00906.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHY 52 usage_00908.pdb 1 VV-NFAAGGV----TTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTH- 51 usage_01145.pdb 1 VV-NFAAGGV----ATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNH- 51 f aGg tpad ga GvfVGsGIfkS P A aiv a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################