################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:15 2021 # Report_file: c_1418_88.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00239.pdb # 2: usage_00240.pdb # 3: usage_00405.pdb # 4: usage_00406.pdb # 5: usage_00970.pdb # 6: usage_00971.pdb # 7: usage_00972.pdb # 8: usage_00973.pdb # 9: usage_01219.pdb # # Length: 28 # Identity: 1/ 28 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 28 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 28 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 usage_00240.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 usage_00405.pdb 1 -IKEMQNLSFQDCYSSKFLKHWDHLTQV 27 usage_00406.pdb 1 -TEMTLKM----RERP--ELFETWLDMT 21 usage_00970.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 usage_00971.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 usage_00972.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 usage_00973.pdb 1 DIKEMADLTFADAFTADFFATWGKLAAV 28 usage_01219.pdb 1 -IKEMADLTFADAFTADFFATWGKLAAV 27 ikem l w L v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################