################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:13 2021 # Report_file: c_1461_54.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00404.pdb # 2: usage_00713.pdb # 3: usage_01072.pdb # 4: usage_01073.pdb # 5: usage_01564.pdb # 6: usage_01565.pdb # 7: usage_01566.pdb # 8: usage_01567.pdb # 9: usage_01598.pdb # 10: usage_02081.pdb # 11: usage_02467.pdb # 12: usage_02504.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 36 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 36 ( 69.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00404.pdb 1 ---ES-----S--IECSDDTYILDAAEEAG------ 20 usage_00713.pdb 1 --A-------Q--VI----TSVKEAKQIVKDWKS-- 19 usage_01072.pdb 1 --T-------K--LI----TTVKEMQHIVKAAKRS- 20 usage_01073.pdb 1 -MT-------K--LI----TTVKEMQHIVKAAKRSG 22 usage_01564.pdb 1 -MT-------K--LI----TTVKEMQHIVKAAKRSG 22 usage_01565.pdb 1 -MT-------K--LI----TTVKEMQHIVKAAKRSG 22 usage_01566.pdb 1 --T-------K--LI----TTVKEMQHIVKAAKRSG 21 usage_01567.pdb 1 --T-------K--LI----TTVKEMQHIVKAAKRS- 20 usage_01598.pdb 1 -----------FTTA----IDTENIRFVFHAVKDTI 21 usage_02081.pdb 1 DTK-------ILHPL----PRVNEI--KVEVDSN-- 21 usage_02467.pdb 1 -----TASLVG--AR----VDVDQAVAFAAAHG--- 22 usage_02504.pdb 1 --A-------Q--VI----TSVKEAKQIVKDWKS-- 19 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################