################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:46 2021 # Report_file: c_0791_113.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00625.pdb # 2: usage_00721.pdb # 3: usage_00864.pdb # 4: usage_00865.pdb # 5: usage_00879.pdb # 6: usage_01092.pdb # # Length: 64 # Identity: 1/ 64 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 64 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 64 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00625.pdb 1 FFVGGNWKA-NPKTVEEAEKLIEMLNGAKVEGNVEVVVAAPFYFLPTLQQKLR---KD-W 55 usage_00721.pdb 1 -YFVGGNFKCN-GTKESLKTLIDSFKQVESS-NSEVYVFPTSLHISLVKEFFGNDHPGVF 57 usage_00864.pdb 1 --FIGGNFKCN-GSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANT---SKQL 54 usage_00865.pdb 1 -PFIGGNFKCN-GSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANT---SKQL 55 usage_00879.pdb 1 -FFVGGNWKMN-GRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLD---PKIA 55 usage_01092.pdb 1 QPIAAANWKCN-GSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLS---HPKF 56 g n k N g vv a usage_00625.pdb 56 KVSA 59 usage_00721.pdb 58 KI-- 59 usage_00864.pdb 55 RIAA 58 usage_00865.pdb 56 RIAA 59 usage_00879.pdb 56 VAA- 58 usage_01092.pdb 57 VI-- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################