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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:15:48 2021
# Report_file: c_0487_31.html
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#====================================
# Aligned_structures: 5
#   1: usage_00033.pdb
#   2: usage_00050.pdb
#   3: usage_00154.pdb
#   4: usage_00236.pdb
#   5: usage_00260.pdb
#
# Length:        121
# Identity:       22/121 ( 18.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     46/121 ( 38.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/121 ( 22.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00033.pdb         1  PVGAYGGRAEIMKMVAPAGPT-L-----SGNPLAMTAGIKTLEILS-RPGSYEHLDRITG   53
usage_00050.pdb         1  PAAAYAGRREIMEKVAP-LGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGA   59
usage_00154.pdb         1  PVGAYGGKAEIMEQIAP-SGPIYQAGTLSGNPLAMTAGLETLKQLT--PDSYKNFIKKGD   57
usage_00236.pdb         1  PVGAYGGKREIMQLVAP-AGPMYQAGTLSGNPLAMTAGIKTLELLR-QPGTYEYLDQITK   58
usage_00260.pdb         1  PVGAFGGKREIMQQISP-LGPVYQA-G-TGNPLAMAAGLTTLRLIS-RPGFHDELTAYTT   56
                           PvgAygG  EIM   aP  gp y     sGNPLAM AG  TL  l   Pg y  l     

usage_00033.pdb        54  KLVQGLLDAAREFGHEVCGGHISGMFGLFFTAG-PVTNYEQAKQSDLKKFAAFHRGMLEQ  112
usage_00050.pdb        60  RLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEG-PVVTFQDARRTDTELFKRFFHGLLDR  118
usage_00154.pdb        58  RLEEGISKAAEAHGIPHTFNRAGSMIGFFFTNE-PVINYETAKA----------------  100
usage_00236.pdb        59  RLSDGLLAIAQETGHAACGGQVSGMFGFFFTEG-PVHNYEDAKKSDLQKFSRFHRGMLEQ  117
usage_00260.pdb        57  RMLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADAIVTFEDVMAS---------------  101
                           rl  Gl   a   G          M g fFt   pv   e a                  

usage_00033.pdb       113  G  113
usage_00050.pdb       119  G  119
usage_00154.pdb            -     
usage_00236.pdb       118  G  118
usage_00260.pdb            -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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