################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:03:47 2021 # Report_file: c_0405_22.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00037.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00054.pdb # 6: usage_00068.pdb # 7: usage_00077.pdb # 8: usage_00081.pdb # 9: usage_00089.pdb # 10: usage_00112.pdb # 11: usage_00144.pdb # 12: usage_00146.pdb # 13: usage_00385.pdb # 14: usage_00406.pdb # 15: usage_00445.pdb # 16: usage_00471.pdb # 17: usage_00474.pdb # 18: usage_00477.pdb # 19: usage_00479.pdb # 20: usage_00503.pdb # 21: usage_00564.pdb # 22: usage_00566.pdb # 23: usage_00567.pdb # 24: usage_00572.pdb # # Length: 83 # Identity: 26/ 83 ( 31.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 83 ( 55.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 83 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 GRLLLVCHVSGFYPKPVWVKWMRGEQEQQG---TQPGDILPNADETWYLRATLDVVAGEA 57 usage_00044.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00045.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00046.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00054.pdb 1 --LLLVCHVSGFYPKPVWVKWMRGEQEQQG---TQPGDILPNADETWYLRATLDVVAGE- 54 usage_00068.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00077.pdb 1 -HRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 56 usage_00081.pdb 1 GHRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 57 usage_00089.pdb 1 GHRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 57 usage_00112.pdb 1 --LLLVCHVSGFYPKPVWVKWMRGEQEQQG---TQPGDILPNADETWYLRATLDVV--AA 53 usage_00144.pdb 1 GHRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 57 usage_00146.pdb 1 -RLLLVCHVSGFYPKPVWVKWMRGEQEQQG---TQPGDILPNADETWYLRATLDVVAGEA 56 usage_00385.pdb 1 GHRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 57 usage_00406.pdb 1 -HRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 56 usage_00445.pdb 1 VQLLLVCRVTSFYPRPIAVTWLRDGREVPPSPALSTGTVLPNADLTYQLRSTLLVSPQDG 60 usage_00471.pdb 1 GHRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 57 usage_00474.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00477.pdb 1 GRLLLVCHVSGFYPKPVRVMWMRGEQEEPG---TRQGDVMPNADSTWYLRVTLDVAAGEV 57 usage_00479.pdb 1 GRLLLVCHVSGFYPKPVRVMWMRGEQEEPG---TRQGDVMPNADSTWYLRVTLDV----- 52 usage_00503.pdb 1 GHLQLVCHVSGFYPKPVWVMWMRGEQEQQG---TQRGDILPSADGTWYLRATLEVAAGEA 57 usage_00564.pdb 1 GRLLLVCHVSGFYPKPVRVMWMRGEQEQPG---TQQGDLMPNADWTWYLRVTLNVAAGEA 57 usage_00566.pdb 1 -RLLLVCHVSGFYPKPVRVMWMRGEQEQPG---TQQGDLMPNADWTWYLRVTLNVAAGEA 56 usage_00567.pdb 1 GRLLLVCHVSGFYPKPVRVMWMRGEQEQPG---TQQGDLMPNADWTWYLRVTLNVAAGEA 57 usage_00572.pdb 1 -HRQLVCHVSGFYPKPVWVMWMRGDQEQQG---THRGDFLPNADETWYLQATLDVEAGEE 56 LVChVsgFYPkPv V WmRg qE g t Gd P AD TwyL TL V usage_00037.pdb 58 AGLSCRVKHSSLEGQDIVLYW-- 78 usage_00044.pdb 58 ADLSCRVKHSSLEGQDIVLYWE- 79 usage_00045.pdb 58 ADLSCRVKHSSLEGQDIVLYW-- 78 usage_00046.pdb 58 ADLSCRVKHSSLEGQDIVLY--- 77 usage_00054.pdb 55 ---SCRVKHSSLEGQDIVLYW-- 72 usage_00068.pdb 58 ADLSCRVKHSSLEGQDIVLYW-- 78 usage_00077.pdb 57 AGLACRVKHSSLGGQDIILYW-- 77 usage_00081.pdb 58 AGLACRVKHSSLGGQDIILYW-- 78 usage_00089.pdb 58 AGLACRVKHSSLGGQDIILYW-- 78 usage_00112.pdb 54 -GLSCRVKHSSLEGQDIVLY--- 72 usage_00144.pdb 58 AGLACRVKHSSLGGQDIILYW-- 78 usage_00146.pdb 57 AGLSCRVKHSSLEGQDIVLYW-- 77 usage_00385.pdb 58 AGLACRVKHSSLGGQDIILYW-- 78 usage_00406.pdb 57 AGLACRVKHSSLGGQDIILYW-- 77 usage_00445.pdb 61 HGYACRVQHCSLGDRSLLVPWHH 83 usage_00471.pdb 58 AGLACRVKHSSLGGQDIILYW-- 78 usage_00474.pdb 58 ADLSCRVKHSSLEGQDIVLY--- 77 usage_00477.pdb 58 AGLSCQVKHSSLGDQDIILYWHH 80 usage_00479.pdb 53 AGLSCQVKHSSLGDQDIILYWH- 74 usage_00503.pdb 58 ADLSCRVKHSSLEGQDIVLY--- 77 usage_00564.pdb 58 AGLNCRVKHSSLGDQDIILYWH- 79 usage_00566.pdb 57 AGLNCRVKHSSLGDQDIILYWH- 78 usage_00567.pdb 58 AGLNCRVKHSSLGDQDIILYWH- 79 usage_00572.pdb 57 AGLACRVKHSSLGGQDIILYW-- 77 C VkHsSL qdi ly #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################