################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:52 2021 # Report_file: c_0958_65.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00539.pdb # 2: usage_00540.pdb # 3: usage_00832.pdb # 4: usage_00833.pdb # 5: usage_00834.pdb # 6: usage_01048.pdb # 7: usage_01066.pdb # 8: usage_01067.pdb # 9: usage_01068.pdb # 10: usage_01069.pdb # 11: usage_01070.pdb # 12: usage_01133.pdb # 13: usage_01321.pdb # # Length: 53 # Identity: 36/ 53 ( 67.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 53 ( 67.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 53 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00539.pdb 1 ---LLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASS--GPQQLPINGVFVF-- 46 usage_00540.pdb 1 ---LLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASS--GPQQLPINGVFVF-- 46 usage_00832.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASS--GPQQLPINGVFVF-- 49 usage_00833.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGAS---GPQQLPINGVFVF-- 48 usage_00834.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASS--GPQQLPINGVFVF-- 49 usage_01048.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGA----GPQQLPINGVFVF-- 47 usage_01066.pdb 1 ---LLHYVDPDTHRNLGEFKMYPEGYMTCVPN-A----GPQTLPINGVFVF-- 43 usage_01067.pdb 1 DAALLHYVDPDTHRNLGEFKMYPEGYMTCVPN------GPQTLPINGVFVF-- 45 usage_01068.pdb 1 ---LLHYVDPDTHRNLGEFKMYPEGYMTCVPN-A----GPQTLPINGVFVFIS 45 usage_01069.pdb 1 DAALLHYVDPDTHRNLGEFKMYPEGYMTCVPN------GPQTLPINGVFVF-- 45 usage_01070.pdb 1 ---LLHYVDPDTHRNLGEFKMYPEGYMTCVPN-A--GGGPQTLPINGVFVF-- 45 usage_01133.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASS--GPQQLPINGVFVF-- 49 usage_01321.pdb 1 EAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNASS---GPQQLPINGVFVF-- 48 LLHYVDPDT RNLGEFK YP G TCVPN GPQ LPINGVFVF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################