################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:42 2021 # Report_file: c_0502_8.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00254.pdb # 2: usage_00255.pdb # 3: usage_00256.pdb # 4: usage_00418.pdb # # Length: 88 # Identity: 14/ 88 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/ 88 ( 92.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 88 ( 6.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00254.pdb 1 -LAQSLTLIEQKRADATLNDELAVLDYLKKNP--NGVKIVWSAPADEKVGSGLIVNKGND 57 usage_00255.pdb 1 -LAQSLTLIEQKRADATLNDELAVLDYLKKNP-NAGVKIVWSAPADEKVGSGLIVNKGND 58 usage_00256.pdb 1 -LAQSLTLIEQKRADATLNDELAVLDYLKKNP-NAGVKIVWSAPADEKVGSGLIVNKGND 58 usage_00418.pdb 1 DLAHQIRNVSDGKYDFKIFEKISAETIIKEQGL-DNLKVIDLPS-DQKPYVYFIFAQDQK 58 LAqsltlieqkraDatlndelavldylKknp gvKivwsap DeKvgsglIvnkgnd usage_00254.pdb 58 EAVAKFSTAINELKADGTLKKLGEQF-- 83 usage_00255.pdb 59 EAVAKFSTAINELKADGTLKKLGEQF-- 84 usage_00256.pdb 59 EAVAKFSTAINELKADGTLKKLGEQF-- 84 usage_00418.pdb 59 DLQKFVNKRLKKLYENGTLEKLSKKYLG 86 eavakfstaineLkadGTLkKLgeqf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################