################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:05 2021 # Report_file: c_1222_47.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00047.pdb # 2: usage_00072.pdb # 3: usage_00105.pdb # 4: usage_00153.pdb # 5: usage_00271.pdb # 6: usage_00293.pdb # 7: usage_00421.pdb # 8: usage_00493.pdb # 9: usage_00516.pdb # 10: usage_00825.pdb # 11: usage_00851.pdb # 12: usage_01029.pdb # 13: usage_01705.pdb # 14: usage_01772.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 39 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 39 ( 64.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 SIVGRPR-------------------KDSYVGDEAQS-- 18 usage_00072.pdb 1 SIVGR---------------------KDSYVGDEAQSKR 18 usage_00105.pdb 1 SIVGRPR---------------------SYVGDEAQSKR 18 usage_00153.pdb 1 EKATAGL-----AG----KD-------SAVSGPAVGDF- 22 usage_00271.pdb 1 TYVTVELHGRETRG----ATC----IDWYGTEQSMAKK- 30 usage_00293.pdb 1 SIVGRPR-----H-QGVMVG---MGQKDSYVGDEAQSK- 29 usage_00421.pdb 1 ALVGRPI------I-------RE--IKDLMVGDEASEL- 23 usage_00493.pdb 1 SIVGRPR-----H-QGVMVG---MGQKDSYVGDEAQSKR 30 usage_00516.pdb 1 SIVGRP-------------------QKDSYVGDEAQSKR 20 usage_00825.pdb 1 SIVGRPR-----H-QGVMVG---MGQKDSYVGDEAQSKR 30 usage_00851.pdb 1 SIVGRPR--------------------DSYVGDEAQSKR 19 usage_01029.pdb 1 SIVGRPR-----H-QGVMVG---MGQKDSYVGDEAQSKR 30 usage_01705.pdb 1 VVGFGP--------------------KNRYLGETGKNK- 18 usage_01772.pdb 1 VVGFGP--------------------KNRYLGETGKNKQ 19 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################