################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:19:48 2021 # Report_file: c_0034_14.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00044.pdb # 4: usage_00056.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00165.pdb # 8: usage_00166.pdb # 9: usage_00167.pdb # 10: usage_00201.pdb # # Length: 244 # Identity: 51/244 ( 20.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/244 ( 26.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/244 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 60 usage_00011.pdb 1 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV 60 usage_00044.pdb 1 --RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV 58 usage_00056.pdb 1 --KILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDV 58 usage_00062.pdb 1 --KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADV 58 usage_00063.pdb 1 --KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADV 58 usage_00165.pdb 1 GKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEAMKKRVEPLAEEVKGFVCGHCDV 60 usage_00166.pdb 1 ---GLILGLANNRSIAWGIAKTASSAGAELAFTYQGEAMKKRVEPLAEEVKGFVCGHCDV 57 usage_00167.pdb 1 GKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEAMKKRVEPLAEEVKGFVCGHCDV 60 usage_00201.pdb 1 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDV 60 L G S IA GA A Y A DV usage_00010.pdb 61 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLE-TSKSAFNTAMEISVYSLI 119 usage_00011.pdb 61 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLE-TSKSAFNTAMEISVYSLI 119 usage_00044.pdb 59 AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 118 usage_00056.pdb 59 ASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLP 118 usage_00062.pdb 59 TQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYID-TRRQDWLLALEVSAYSLV 117 usage_00063.pdb 59 TQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYID-TRRQDWLLALEVSAYSLV 117 usage_00165.pdb 61 SDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVD-ISESNFMMTMNISVYSLT 119 usage_00166.pdb 58 SDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVD-ISESNFMMTMNISVYSLT 116 usage_00167.pdb 61 SDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVD-ISESNFMMTMNISVYSLT 119 usage_00201.pdb 61 ADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFP 120 lD VH F e G S YS usage_00010.pdb 120 ELTNTLKPLL-NNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV 178 usage_00011.pdb 120 ELTNTLKPLL-NNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV 178 usage_00044.pdb 119 AMAKACRSML-NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRV 177 usage_00056.pdb 119 ALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRC 178 usage_00062.pdb 118 AVARRAEPLL-REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 176 usage_00063.pdb 118 AVARRAEPLL-REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 176 usage_00165.pdb 120 ALTKRAEKLM-SDGGSILTLTYYGAEKVVPNYNVMGVAKAALEASVKYLAVDLGPKHIRV 178 usage_00166.pdb 117 ALTKRAEKLM-SDGGSILTLTYYGAEKVVPNYNVMGVAKAALEASVKYLAVDLGPKHIRV 175 usage_00167.pdb 120 ALTKRAEKLM-SDGGSILTLTYYGAEKVVPNYNVMGVAKAALEASVKYLAVDLGPKHIRV 178 usage_00201.pdb 121 ALAKAALPML-SDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRV 179 tL Y YNvM AKA LE v y A lG Rv usage_00010.pdb 179 NALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV 238 usage_00011.pdb 179 NALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV 238 usage_00044.pdb 178 NAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 237 usage_00056.pdb 179 NGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEI 238 usage_00062.pdb 177 NAISAGPVR-VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV 235 usage_00063.pdb 177 NAISAGPVR-VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV 235 usage_00165.pdb 179 NAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRSVTGEV 238 usage_00166.pdb 176 NAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRSVTGEV 235 usage_00167.pdb 179 NAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRSVTGEV 238 usage_00201.pdb 180 NAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEV 239 Na SAGP A I F Plr E VG LlS L gEv usage_00010.pdb 239 HFVD 242 usage_00011.pdb 239 HFVD 242 usage_00044.pdb 238 VHVD 241 usage_00056.pdb 239 TYVD 242 usage_00062.pdb 236 VYVD 239 usage_00063.pdb 236 VYVD 239 usage_00165.pdb 239 HHVD 242 usage_00166.pdb 236 HHVD 239 usage_00167.pdb 239 HHVD 242 usage_00201.pdb 240 MHVD 243 VD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################