################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:50 2021 # Report_file: c_1065_33.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00041.pdb # 2: usage_00044.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00074.pdb # 8: usage_00084.pdb # 9: usage_00098.pdb # 10: usage_00131.pdb # 11: usage_00140.pdb # 12: usage_00191.pdb # 13: usage_00192.pdb # 14: usage_00209.pdb # 15: usage_00210.pdb # 16: usage_00221.pdb # 17: usage_00231.pdb # 18: usage_00236.pdb # 19: usage_00252.pdb # # Length: 50 # Identity: 3/ 50 ( 6.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 50 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 50 ( 26.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 PKT-----ARYR-VSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHL-- 42 usage_00044.pdb 1 ----QKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL-- 44 usage_00053.pdb 1 ----PGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL-- 44 usage_00054.pdb 1 ----SEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGM-LRQKLRDIIKD 45 usage_00067.pdb 1 ---LKDVAEAYNVEAMPTFLFIKDGEKVDSVVGGRKDD-IHTKIVALMG- 45 usage_00068.pdb 1 ---LKDVAEAYNVEAMPTFLFIKDGEKVDSVVGGRKDD-IHTKIVALM-- 44 usage_00074.pdb 1 ---AEKTMAELNIRTLPSLALFVDGMIREVFSGTMNKSDLRYWINNNI-- 45 usage_00084.pdb 1 ----TDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI-- 44 usage_00098.pdb 1 ----QETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL-- 44 usage_00131.pdb 1 -----DVATQYGVSAIPTILMFKNGKKLSQVIGADISK-IISEINNNI-- 42 usage_00140.pdb 1 ----PEIAAKYGIMSIPTLLFFKNGKVVDQLVGAMPKEALKERIKKYL-- 44 usage_00191.pdb 1 ----PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL-- 44 usage_00192.pdb 1 ----PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL-- 44 usage_00209.pdb 1 ----PEIAKKYNITTTPTVAFFKNGEDKSVLIGAIPKDQLRDEILKYLG- 45 usage_00210.pdb 1 ----PEIAKKYNITTTPTVAFFKNGEDKSVLIGAIPKDQLRDEILKYL-- 44 usage_00221.pdb 1 ----PTIAARYGISAIPTLIFFKKGKPVDQLVGAMPKSELKRWVQRNL-- 44 usage_00231.pdb 1 ----PNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKY--- 43 usage_00236.pdb 1 ----PGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL-- 44 usage_00252.pdb 1 ----PGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLEG 46 Pt G G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################