################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:07 2021 # Report_file: c_0726_40.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00243.pdb # # Length: 85 # Identity: 22/ 85 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/ 85 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 85 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 TGIFFIQRH---YPVPLKSESIYYRKGSAGSK-LSPEDVDEE-YVKSADLVHSSGITLAI 55 usage_00048.pdb 1 TGIFFIQRH---YPVPLKSESIYYRKGSAGSK-LSPEDVDEE-YVKSADLVHSSGITLAI 55 usage_00243.pdb 1 -GTYYLESGTAL----KAPSVVYDRQHSSFARHKS-MDWDLSELLKGIRVLHVSGITIAL 54 Giffiqrh lksesiYyRkgSagsk lS eDvDee yvKsadlvHsSGITlAi usage_00047.pdb 56 SSTAKEAVYKAFEIAS----NRSFD 76 usage_00048.pdb 56 SSTAKEAVYKAFEIAS----NRSFD 76 usage_00243.pdb 55 STFWLEMVVKIIREAKRNGIKISFD 79 SstakEaVyKafeiAs nrSFD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################