################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:42 2021 # Report_file: c_0038_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00043.pdb # 2: usage_00095.pdb # 3: usage_00161.pdb # 4: usage_00162.pdb # 5: usage_00163.pdb # 6: usage_00164.pdb # 7: usage_00165.pdb # 8: usage_00166.pdb # 9: usage_00167.pdb # # Length: 221 # Identity: 60/221 ( 27.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/221 ( 53.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/221 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 PFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQ 60 usage_00095.pdb 1 PLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVP-GGIETGQ 59 usage_00161.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 usage_00162.pdb 1 --------IAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 52 usage_00163.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 usage_00164.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 usage_00165.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 usage_00166.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 usage_00167.pdb 1 PLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGD 60 iapAl G TvVLKPaeeTplTa rLAEla EaGlP G lnVVt G aG usage_00043.pdb 61 VLAEDPNVD-VAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIA 119 usage_00095.pdb 60 ALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMV 119 usage_00161.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 usage_00162.pdb 53 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 112 usage_00163.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 usage_00164.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 usage_00165.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 usage_00166.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 usage_00167.pdb 61 ALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAA 120 aL P v vaFTGS VGr G r lK v LELGGKsp IvlaD D Aa g a usage_00043.pdb 120 YGVYHNAGQCCISGSRLLVQEGIRDAL-ERLLDISRKVAFGDPLNERTKIGA-ISEAHAE 177 usage_00095.pdb 120 FSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRT 179 usage_00161.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 usage_00162.pdb 113 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 172 usage_00163.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 usage_00164.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 usage_00165.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 usage_00166.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 usage_00167.pdb 121 AAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHE 180 N GQ C gsRl v esiy rl i vG l Gp S kh e usage_00043.pdb 178 KVHSYVTAGITSGAELLLGGERIGREAGL-YYAPTVFAG-- 215 usage_00095.pdb 180 RVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFAD-- 218 usage_00161.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFA--- 217 usage_00162.pdb 173 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFANRE 212 usage_00163.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFA--- 217 usage_00164.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFA--- 217 usage_00165.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFA--- 217 usage_00166.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFANRE 220 usage_00167.pdb 181 NVLRHIRNGIEDGADLICGGTEAPCAQGF-FVKPTIFA--- 217 V i GIe GA L cGG g f PT FA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################