################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:43 2021 # Report_file: c_0199_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00011.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00367.pdb # 10: usage_00368.pdb # # Length: 170 # Identity: 43/170 ( 25.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/170 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/170 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00006.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00007.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00008.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00009.pdb 1 LTSVKKAEQYLLENE-TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT 59 usage_00011.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00039.pdb 1 LQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 60 usage_00040.pdb 1 LQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 60 usage_00367.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 usage_00368.pdb 1 MRAVHAAEQRMLETE-TTKTYAGLSGEPEFQKAMGELILGDGLKS---ETTATLATVGGT 56 aV AE r Y G a L G aT T GG usage_00005.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00006.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00007.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00008.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00009.pdb 60 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALIN 119 usage_00011.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00039.pdb 61 GALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLA 120 usage_00040.pdb 61 GALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLA 120 usage_00367.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 usage_00368.pdb 57 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA 116 GAL p V VSdPtW NHv i G V tY D t gv F a usage_00005.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLA- 165 usage_00006.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDL-- 164 usage_00007.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDL-- 164 usage_00008.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLA- 165 usage_00009.pdb 120 SLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDF-- 167 usage_00011.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLID--- 163 usage_00039.pdb 121 TLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAY 170 usage_00040.pdb 121 TLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAY 170 usage_00367.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLA- 165 usage_00368.pdb 117 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDL-- 164 L G VLlH CCHNPTGa lT dQW il P D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################