################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:34 2021 # Report_file: c_1298_99.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00480.pdb # 2: usage_00807.pdb # 3: usage_00808.pdb # 4: usage_00809.pdb # 5: usage_00859.pdb # # Length: 48 # Identity: 4/ 48 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 48 ( 29.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 48 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00480.pdb 1 RKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNE-EDHT-VQINFIVD 46 usage_00807.pdb 1 ----L----ESIKKAIEEGVGHSPYIECNVDT--QGNHQIYQVYLCVD 38 usage_00808.pdb 1 ---------ESIKKAIEEGVGHSPYIECNVDT--QGNHQIYQVYLCVD 37 usage_00809.pdb 1 ---TL----ESIKKAIEEGVGHSPYIECNVDT--QGNHQIYQVYLCVD 39 usage_00859.pdb 1 ---KV----EGIMSAIQSALRVTPVVKCKS-------DAVEQVQICFD 34 E Ik ai sp c h Qv cvD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################