################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:50 2021 # Report_file: c_0008_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00048.pdb # 9: usage_00049.pdb # 10: usage_00058.pdb # 11: usage_00101.pdb # 12: usage_00107.pdb # 13: usage_00108.pdb # # Length: 295 # Identity: 76/295 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/295 ( 26.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/295 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00019.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00020.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00021.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00022.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00023.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00024.pdb 1 GIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00048.pdb 1 GLFPAMVTPFTKDGKLHKAGVKEVVNFLVEKQKVDGIYITGSTGEFLLLSFEDKKEVMKL 60 usage_00049.pdb 1 GLFPAMVTPFTKDGKLHKAGVKEVVNFLVEKQKVDGIYITGSTGEFLLLSFEDKKEVMKL 60 usage_00058.pdb 1 GLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQKKQVFKV 60 usage_00101.pdb 1 GIFSALLVSFNADGSINEKGLRQIVRYNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRI 60 usage_00107.pdb 1 GLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQKKQVFKV 60 usage_00108.pdb 1 GLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQKKQVFKV 60 G A F G G DG Y GS GE L E KK usage_00018.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00019.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00020.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00021.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00022.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00023.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00024.pdb 61 AKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTI 120 usage_00048.pdb 61 VAEANAGRVTLIAQIGSLNIEETKELAKLAKELKYDAISAITPYYYNFSFNETHHYYEEI 120 usage_00049.pdb 61 VAEANAGRVTLIAQIGSLNIEETKELAKLAKELKYDAISAITPYYYNFSFNETHHYYEEI 120 usage_00058.pdb 61 AKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIRDYYFDI 120 usage_00101.pdb 61 AKDEAKDEIALIAQVGSVNLQEAIELGKYATELGYDSLSAVTPFYYKFSFPEIKHYYDSI 120 usage_00107.pdb 61 AKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIRDYYFDI 120 usage_00108.pdb 61 AKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIRDYYFDI 120 LIAQ GS E EL K A EL YD SA TP YY F F E YY I usage_00018.pdb 121 IAETGSNMIVYSIPFLTGVNM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 173 usage_00019.pdb 121 IAETGSNMIVYSIPFLTGVNM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 173 usage_00020.pdb 121 IAETGSNMIVYSIPFLTGVNM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 173 usage_00021.pdb 121 IAETGSNMIVYSIP-----NM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 168 usage_00022.pdb 121 IAETGSNMIVYSIP-----NM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 168 usage_00023.pdb 121 IAETGSNMIVYSIP-----NM-------GIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 168 usage_00024.pdb 121 IAETGSNMIVYSIP-------FLTGVNMGIEQFGELYKNPKVLGVKFTAGDFYLLERLKK 173 usage_00048.pdb 121 SKAADIPMLIYYLP------V-------STDQFGKLLEIKNVIGSKYGATDLFAFERLMS 167 usage_00049.pdb 121 SKAADIPMLIYYLP-----QV-------STDQFGKLLEIKNVIGSKYGATDLFAFERLMS 168 usage_00058.pdb 121 IEATQNNMIIYA--------I-------SIEQFSELFNHEKIVGVKYTAPNFFLLERIRK 165 usage_00101.pdb 121 IEATGNYMIVYSIPFLTGVNI-------GVEQFGELYKNPKVLGVAFTAGDFYLLERLKK 173 usage_00107.pdb 121 IEATQNNMIIYAIPDLTGVNI-------SIEQFSELFNHEKIVGVCYTAPNFFLLERIRK 173 usage_00108.pdb 121 IEATQNNMIIYAIPDLTGVNI-------SIEQFSELFNHEKIVGVCYTAPNFFLLERIRK 173 M Y QF L G A ER usage_00018.pdb 174 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 233 usage_00019.pdb 174 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 233 usage_00020.pdb 174 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 233 usage_00021.pdb 169 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 228 usage_00022.pdb 169 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 228 usage_00023.pdb 169 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 228 usage_00024.pdb 174 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVT 233 usage_00048.pdb 168 KYPDKLFMFAWDEALAMGLTMGAKGFIGSTYNVNAKGANAIIKAWEANDKEAVMKLTHTY 227 usage_00049.pdb 169 KYPDKLFMFAWDEALAMGLTMGAKGFIGSTYNVNAKGANAIIKAWEANDKEAVMKLTHTY 228 usage_00058.pdb 166 AFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDS 225 usage_00101.pdb 174 AYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTQAGKLKEALEIQHVT 233 usage_00107.pdb 174 AFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDS 233 usage_00108.pdb 174 AFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDS 233 P L DE G G IGST NVN A I H usage_00018.pdb 234 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 288 usage_00019.pdb 234 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 288 usage_00020.pdb 234 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 288 usage_00021.pdb 229 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 283 usage_00022.pdb 229 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 283 usage_00023.pdb 229 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 283 usage_00024.pdb 234 NDLIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS 288 usage_00048.pdb 228 NDYVLDLISKGLMQSLKAIMRLHGVDAGYTRKPFWRYEDEEIKKHAEFITDKYL- 281 usage_00049.pdb 229 NDYVLDLISKGLMQSLKAIMRLHGVDAGYTRKPFWRYEDEEIKKHAEFITDKYL- 282 usage_00058.pdb 226 NDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKYD-- 278 usage_00101.pdb 234 NDLIEGILANGLYLTIKELLKLDGVEAGYCREPMTKELSSEKVAFAKELKAK--- 285 usage_00107.pdb 234 NDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKY--- 285 usage_00108.pdb 234 NDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKY--- 285 ND G K G dAG P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################