################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:23 2021 # Report_file: c_1148_203.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00630.pdb # 2: usage_00648.pdb # 3: usage_00700.pdb # 4: usage_01322.pdb # 5: usage_01323.pdb # 6: usage_01502.pdb # 7: usage_01503.pdb # 8: usage_01504.pdb # 9: usage_01846.pdb # 10: usage_01910.pdb # 11: usage_01917.pdb # 12: usage_02636.pdb # 13: usage_03491.pdb # 14: usage_03557.pdb # 15: usage_03789.pdb # # Length: 26 # Identity: 1/ 26 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 26 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 26 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00630.pdb 1 --GTVTINADGWGNFSVNGGSVSIWV 24 usage_00648.pdb 1 ---PVVINSEGWGEFHVNGGSVSIYV 23 usage_00700.pdb 1 --GTVTINADGWGNFTVNGGAVSVWV 24 usage_01322.pdb 1 --GTVTINADGWANFSVNGGSVSIWV 24 usage_01323.pdb 1 --GTVTINADGWANFSVNGGSVSIWV 24 usage_01502.pdb 1 G-ASVTINGDGWGEFFTNGGSVSVYV 25 usage_01503.pdb 1 G-ASVTINGDGWGEFFTNGGSVSVYV 25 usage_01504.pdb 1 G-ASVTINGDGWGEFFTNGGSVSVYV 25 usage_01846.pdb 1 --GTVTINADGWANFSVNGGSVSIWV 24 usage_01910.pdb 1 --GTVTINADGWGNFSVNGGSVSIWV 24 usage_01917.pdb 1 --GTVTINADGWGNFSVNGGSVSIWV 24 usage_02636.pdb 1 S-DTVKIGSDGWGEFHVNDGSVSIYV 25 usage_03491.pdb 1 ---PVVINSAGWGEFHVNGGSVSIYV 23 usage_03557.pdb 1 --GTVTINADGWGNFSVNGGSVSIWV 24 usage_03789.pdb 1 GTTAVSLSTAAVLVHSA---GSVDLG 23 V i gw f vs v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################