################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:18 2021 # Report_file: c_0431_12.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00026.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00034.pdb # 7: usage_00071.pdb # 8: usage_00080.pdb # 9: usage_00081.pdb # 10: usage_00163.pdb # 11: usage_00164.pdb # 12: usage_00165.pdb # 13: usage_00181.pdb # 14: usage_00186.pdb # # Length: 99 # Identity: 60/ 99 ( 60.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 99 ( 60.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 99 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 --AEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDAHRI 58 usage_00025.pdb 1 --AEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDAHRI 58 usage_00026.pdb 1 ---EVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDAHRI 57 usage_00032.pdb 1 IDAKVIITCPGRNFVTLKIMTDEGVYGLGDATLNGRELAVASYLTDHVIPCLIGRDAHRI 60 usage_00033.pdb 1 IDAKVIITCPGRNFVTLKIMTDEGVYGLGDATLNGRELAVASYLTDHVIPCLIGRDAHRI 60 usage_00034.pdb 1 IDAKVIITCPGRNFVTLKIMTDEGVYGLGDATLNGRELAVASYLTDHVIPCLIGRDAHRI 60 usage_00071.pdb 1 VDAKVIVTCPGRNFVTLKIVTDQGIYGIGDATLNGREKSVVSYLEDYLIPVLIGRDPQQI 60 usage_00080.pdb 1 -DAKVIVTCPGRNFVTLKITTEDGITGVGDATLNGRELSVVSFLQDHMVPSLIGRDAHQI 59 usage_00081.pdb 1 -DAKVIVTCPGRNFVTLKITTEDGITGVGDATLNGRELSVVSFLQDHMVPSLIGRDAHQI 59 usage_00163.pdb 1 IDAKVIVTCPGRNFVTLKITTSDGVTGVGDATLNGRELAVVSYLRDHMIPCLIGRDAHRI 60 usage_00164.pdb 1 -DAKVIVTCPGRNFVTLKITTSDGVTGVGDATLNGRELAVVSYLRDHMIPCLIGRDAHRI 59 usage_00165.pdb 1 -DAKVIVTCPGRNFVTLKITTSDGVTGVGDATLNGRELAVVSYLRDHMIPCLIGRDAHRI 59 usage_00181.pdb 1 -DAKVIVTCPGRNFVTLKITTEDGITGVGDATLNGRELSVVSFLQDHMVPSLIGRDAHQI 59 usage_00186.pdb 1 VDAKVIVTCPGRNFVTLKIVTDQGIYGIGDATLNGREKSVVSYLEDYLIPVLIGRDPQQI 60 V TCPGRNFVTLKI T G G GDATLNGRE V S L D P LIGRD I usage_00024.pdb 59 EDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN 97 usage_00025.pdb 59 EDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN 97 usage_00026.pdb 58 EDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN 96 usage_00032.pdb 61 EDLWQYLYKGAYWRRGPVTMTAIAAVDMALWDIKGKIA- 98 usage_00033.pdb 61 EDLWQYLYKGAYWRRGPVTMTAIAAVDMALWDIKGKIAG 99 usage_00034.pdb 61 EDLWQYLYKGAYWRRGPVTMTAIAAVDMALWDIKGKIA- 98 usage_00071.pdb 61 EDIWQFFYRGAYWRRGPVGMTALAAIDVALWDIKAKLAN 99 usage_00080.pdb 60 EDIWQFFYRGSYWRGGPVAMTALAAVDMALWDIKGKVAG 98 usage_00081.pdb 60 EDIWQFFYRGSYWRGGPVAMTALAAVDMALWDIKGKVA- 97 usage_00163.pdb 61 EDVWQFFYRGSYWRGGPVAMTALAAVDMALWDIKAKLAG 99 usage_00164.pdb 60 EDVWQFFYRGSYWRGGPVAMTALAAVDMALWDIKAKLAG 98 usage_00165.pdb 60 EDVWQFFYRGSYWRGGPVAMTALAAVDMALWDIKAKLAG 98 usage_00181.pdb 60 EDIWQFFYRGSYWRGGPVAMTALAAVDMALWDIKGKVA- 97 usage_00186.pdb 61 EDIWQFFYRGAYWRRGPVGMTALAAIDVALWDIKAKLAN 99 ED WQ Y G YWR GPV M A A D ALWDIK K A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################