################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:09 2021 # Report_file: c_1201_111.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00052.pdb # 2: usage_00447.pdb # 3: usage_00562.pdb # 4: usage_00702.pdb # 5: usage_01101.pdb # 6: usage_01129.pdb # 7: usage_01153.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 58 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 58 ( 75.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 PYFEFDAKVDAA-GEFKFTWYDDDGS-------VYEDVKPIA---------------- 34 usage_00447.pdb 1 --------------HVQLVNR-----EGKA----VGFIEIKESDDEG-LDIHISAN-S 33 usage_00562.pdb 1 ------------IRKLKNYIN-----GEW-VESKTDQYEDVVNPATKEVLCQVPIS-- 38 usage_00702.pdb 1 -------------PVYPSYLA-----GEW-GG-S-GQEIEVKSPIDLATIAKVISP-- 35 usage_01101.pdb 1 --------------KVANYIN-----GEF-KEPSTGAFQVKTSPVDGSKIAEVPRS-- 36 usage_01129.pdb 1 -------------MKVANYIN-----GEF-KEPSTGAFQVKTSPVDGSKIAEVPRSGR 39 usage_01153.pdb 1 -------------MKVANYIN-----GEF-KEPSTGAFQVKTSPVDGSKIAEVPRS-- 37 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################