################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:32 2021 # Report_file: c_0033_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00026.pdb # 8: usage_00027.pdb # 9: usage_00113.pdb # # Length: 255 # Identity: 48/255 ( 18.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 136/255 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/255 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00013.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00014.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00015.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00016.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00017.pdb 1 GSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELC 60 usage_00026.pdb 1 GSITALVTPFA-DDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEIT 59 usage_00027.pdb 1 GSITALVTPFA-DDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEIT 59 usage_00113.pdb 1 GVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQRMEGVERL 60 GsI AL TPf De A vewqI eGs glVp GttGesPtLs eh vVE usage_00012.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00013.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00014.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00015.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00016.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00017.pdb 61 IEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADALLVVTPYYN-KPTQKGLFAHFSAV 119 usage_00026.pdb 60 IKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN-KPTQEGIYQHFKAI 118 usage_00027.pdb 60 IKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN-KPTQEGIYQHFKAI 118 usage_00113.pdb 61 VKAG-I--PVIVGTGAVNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAYFKAI 117 i a PVIaGaGsn T eAi HAQ aGAd l v pyyn kptq g hF A usage_00012.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00013.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00014.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00015.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00016.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00017.pdb 120 AEAV-KLPIVIYNIPPRSVVDMSPETMGALVKAHKNIVGVDATGKLDRVSEQRISCGK-- 176 usage_00026.pdb 119 DAAS-TIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVDATGNLLRPSLERMACGE-- 175 usage_00027.pdb 119 DAAS-TIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVDATGNLLRPSLERMACGE-- 175 usage_00113.pdb 118 LSAAPDLPAVIYNSP-YYGFATRADLFFDLRAEHPNLVGFEFG-GPADMRYAAENIT-SR 174 A Pi YNiP rs et N Gvdat l r s r cg usage_00012.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00013.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00014.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00015.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00016.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00017.pdb 177 --DFIQLSGEDSTALGFNA-HGGVGCISVSANVAPRLCSEFQAAMLAG------DYAKAL 227 usage_00026.pdb 176 --DFNLLTGEDGTALGYMA-HGGHGCISVTANVAPALCADFQQACLNG------DFAAAL 226 usage_00027.pdb 176 --DFNLLTGEDGTALGYMA-HGGHGCISVTANVAPALCADFQQACLNG------DFAAAL 226 usage_00113.pdb 175 DDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQRAQ 234 df l GeD talg a hGg GcIsv aNVaP lc fq a l g d a Al usage_00012.pdb 228 EYQDRL--------- 233 usage_00013.pdb 228 EYQDRL--------- 233 usage_00014.pdb 228 EYQDRL--------- 233 usage_00015.pdb 228 EYQDRL--------- 233 usage_00016.pdb 228 EYQDRL--------- 233 usage_00017.pdb 228 EYQDRL--------- 233 usage_00026.pdb 227 KLQDRLMPLHRALFL 241 usage_00027.pdb 227 KLQDRLMPLHRALFL 241 usage_00113.pdb 235 ELEQAL--------- 240 qdrL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################