################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:13 2021 # Report_file: c_1487_549.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01096.pdb # 2: usage_03573.pdb # 3: usage_03574.pdb # 4: usage_04717.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 47 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 47 ( 61.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01096.pdb 1 APDRLMSTVTAYV-TWHAD---NRAS-----------ARVGQYELRS 32 usage_03573.pdb 1 -TVARAVVSQ---TPFVLLDPAAKAS-----------KAVRQMAFRY 32 usage_03574.pdb 1 RTVARAVVSQ---TPFVLLDPAAKAS-----------KAVRQMAFRY 33 usage_04717.pdb 1 ------HSVGATF-IWQIL---AALKDPQEKSEAQLQLGLLQ----- 32 l a as v Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################