################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:45:36 2021 # Report_file: c_0733_2.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00033.pdb # 2: usage_00050.pdb # 3: usage_00051.pdb # 4: usage_00074.pdb # 5: usage_00089.pdb # 6: usage_00139.pdb # 7: usage_00152.pdb # 8: usage_00155.pdb # 9: usage_00156.pdb # 10: usage_00157.pdb # 11: usage_00158.pdb # 12: usage_00159.pdb # 13: usage_00162.pdb # 14: usage_00163.pdb # 15: usage_00164.pdb # 16: usage_00168.pdb # 17: usage_00169.pdb # 18: usage_00173.pdb # 19: usage_00178.pdb # 20: usage_00183.pdb # 21: usage_00186.pdb # 22: usage_00187.pdb # # Length: 101 # Identity: 18/101 ( 17.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/101 ( 34.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/101 ( 39.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSH-PPYKQTQPGADGF 59 usage_00050.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDTHPPYKQTQPGADGF 59 usage_00051.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDTHPPYKQTQPGADGF 59 usage_00074.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDTHPPYKQTQPGADGF 59 usage_00089.pdb 1 -LYRSGFCIHVQCNASKFHQGALLVAILPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 58 usage_00139.pdb 1 --MRNGWDVEVTAVGNQFNGGCLLVAMVPELCS--------------------------- 31 usage_00152.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00155.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00156.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00157.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00158.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00159.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00162.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00163.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00164.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00168.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00169.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00173.pdb 1 -LYRSGFCIHVQCNASKFHQGALLVAILPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 58 usage_00178.pdb 1 YLYRSGFCVHVQCNASKFHQGALLVAVLPEYVLGTI-A-----ENSHPPYATTQPGQVGA 54 usage_00183.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDSHPPYKQTQPGADGF 59 usage_00186.pdb 1 HLVKNGWDVVVQVNASFAHSGALCVAAVPEYEH--------------THE-KALKW-SEL 44 usage_00187.pdb 1 YLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTG-TEDTHPPYKQTQPGADGF 59 r G Vq nas fh GaLlVA PEy usage_00033.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00050.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00051.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00074.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00089.pdb 59 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYIN 99 usage_00139.pdb 32 IQKR--------ELYQLTLFPHQFINPRTNMTAHITVPF-- 62 usage_00152.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00155.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00156.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00157.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00158.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00159.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00162.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00163.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00164.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00168.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00169.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYIN 100 usage_00173.pdb 59 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYIN 99 usage_00178.pdb 55 VLTHPYVLDAGIPLSQLTVCPHQWINLRTNNCATIIVPY-- 93 usage_00183.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 usage_00186.pdb 45 EEPA-Y------TYQQLSVFPHQLLNLRTNSSVHLVMP--- 75 usage_00187.pdb 60 ELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPY-- 98 QLtv PHQ iNlRTN a i vP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################