################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:55 2021 # Report_file: c_1200_529.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_03099.pdb # 2: usage_03100.pdb # 3: usage_03101.pdb # 4: usage_04560.pdb # 5: usage_05345.pdb # 6: usage_05346.pdb # # Length: 26 # Identity: 4/ 26 ( 15.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 26 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 26 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03099.pdb 1 MSKIIGIDLGTTNSCVAVLEGGEVKV 26 usage_03100.pdb 1 --KIIGIDLGTTNSCVAVLEGGEVKV 24 usage_03101.pdb 1 MSKIIGIDLGTTNSCVAVLEGGEVKV 26 usage_04560.pdb 1 -GPAVGIDLGTTYSCVGVFQHGKVEI 25 usage_05345.pdb 1 -RVVIGITFGNSNSSIAHTVDDKAEV 25 usage_05346.pdb 1 ERVVIGITFGNSNSSIAHTVDDKAEV 26 iGI G nS a v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################