################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:57 2021 # Report_file: c_0328_48.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00073.pdb # 2: usage_00074.pdb # 3: usage_00075.pdb # 4: usage_00076.pdb # 5: usage_00571.pdb # 6: usage_00611.pdb # # Length: 308 # Identity: 2/308 ( 0.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/308 ( 7.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 227/308 ( 73.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 N-PEFNIGYAITVYRLDDEGSV-KSFSLGPLRKAVTLN---------------------- 36 usage_00074.pdb ------------------------------------------------------------ usage_00075.pdb 1 -NSYIKVFLALKLQDVH-----AEAEGEKYIEEILDQI---------------------- 32 usage_00076.pdb ------------------------------------------------------------ usage_00571.pdb 1 --LALYNLLAYVKHLKG-----QNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWV 53 usage_00611.pdb ------------------------------------------------------------ usage_00073.pdb 37 -------------------------------PDNSYIKVFLALKLQDVH----AEAEGEK 61 usage_00074.pdb 1 ----------------------------------PETDCEKGWALLKFGGK--YYQKAKA 24 usage_00075.pdb 33 -------------------------------SSQPYVLRYAAKFYRRKN----SWNKALE 57 usage_00076.pdb 1 ---------------------------------CPETDCEKGWALLKFGGK--YYQKAKA 25 usage_00571.pdb 54 YYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECPETDCEKGWALLKFG--GKYYQKAKA 111 usage_00611.pdb 1 ----------------------------------PETDCEKGWALLKFGGK--YYQKAKA 24 p l ka usage_00073.pdb 62 YIEEILDQISSQPYVLRYAAKFYRRK--------------------------NS--WNKA 93 usage_00074.pdb 25 AFEKALEVEPDNPEFNIGYAITVYRLDD--SDREGS-------------------VKSFS 63 usage_00075.pdb 58 LLKKALEVTPTSSFLHHQMGLCYRAQM--IQIK---KATHNRPKGKDKLKVDEL--ISSA 110 usage_00076.pdb 26 AFEKALEVEPDNPEFNIGYAITVYRLDD--SDREGS-------------------VKSFS 64 usage_00571.pdb 112 AFEKALEVEPDNPEFNIGYAITVYRLD---------------------------DVKSFS 144 usage_00611.pdb 25 AFEKALEVEPDNPEFNIGYAITVYRLDDV---------------------------KSFS 57 ekaLev p p a r s usage_00073.pdb 94 LELLKKALEVTPTSSFLHHQGLCYRAQIQIKKATHNRPKGKDKLK-VDELISSAIFHFKA 152 usage_00074.pdb 64 LGPLRKAVTLNPDNSYIKVFL---ALKLQDVH-------------AEAEGEKYIEEILDQ 107 usage_00075.pdb 111 IFHFKAAMERDSMFAFAYTDL---ANMYAEGG-------------QYSNAEDIFRKALRL 154 usage_00076.pdb 65 LGPLRKAVTLNPDNSYIKVFL---ALKLQDVH-------------AEAEGEKYIEEILDQ 108 usage_00571.pdb 145 LGPLRKAVTLNPDNSYIKVFL---ALKLQDVH---------------------------- 173 usage_00611.pdb 58 LGPLRKAVTLNPDNSYIKVFL---ALKLQDVH-------------AEAEGEKYIEEILDQ 101 l l kA p s l a q usage_00073.pdb 153 AERD-S----FAFAYTDLANYAE-GG---------------------------------- 172 usage_00074.pdb 108 IS---S----QPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQM 160 usage_00075.pdb 155 -E--NITDDHKHQIHYHYGRFQEFHR---------------------------------- 177 usage_00076.pdb 109 IS---S----QPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQM 161 usage_00571.pdb ------------------------------------------------------------ usage_00611.pdb 102 IS---S----QPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQM 154 usage_00073.pdb -------- usage_00074.pdb 161 IQIKKATH 168 usage_00075.pdb 178 K------- 178 usage_00076.pdb 162 IQIKKATH 169 usage_00571.pdb -------- usage_00611.pdb 155 IQIKKATH 162 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################