################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:14 2021 # Report_file: c_1373_47.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00151.pdb # 2: usage_00152.pdb # 3: usage_00162.pdb # 4: usage_00163.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00168.pdb # 8: usage_00169.pdb # 9: usage_00210.pdb # 10: usage_00211.pdb # 11: usage_00212.pdb # 12: usage_00454.pdb # 13: usage_00455.pdb # 14: usage_00484.pdb # 15: usage_00485.pdb # 16: usage_00486.pdb # 17: usage_00487.pdb # 18: usage_00488.pdb # 19: usage_00499.pdb # 20: usage_00727.pdb # 21: usage_00728.pdb # 22: usage_00729.pdb # 23: usage_01083.pdb # 24: usage_01694.pdb # 25: usage_01695.pdb # 26: usage_01750.pdb # 27: usage_01899.pdb # 28: usage_01900.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 49 ( 16.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 49 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00151.pdb 1 ---SMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_00152.pdb 1 ---SMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_00162.pdb 1 -TPSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00163.pdb 1 -TPSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00166.pdb 1 --PSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 47 usage_00167.pdb 1 -TPSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00168.pdb 1 ---SMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_00169.pdb 1 ---SMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_00210.pdb 1 ---SMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_00211.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00212.pdb 1 -TPSMEMYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00454.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00455.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00484.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00485.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00486.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_00487.pdb 1 --PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 47 usage_00488.pdb 1 --PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 47 usage_00499.pdb 1 ---TTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDG 46 usage_00727.pdb 1 ----SEDYIEQIY-LIEEKGYARVSDIAEALAVHPSSVTK-VQKLDKDE 43 usage_00728.pdb 1 ----SEDYIEQIY-LIEEKGYARVSDIAEALAVHPSSVTKVQKLDK-DE 43 usage_00729.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_01083.pdb 1 TLKKAFEILDFIVKN-P--GDVSVSEIAEKFNMSVSNAYKYMVVLEEKG 46 usage_01694.pdb 1 -TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 48 usage_01695.pdb 1 --PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 47 usage_01750.pdb 1 -SRREFSYLLTIKRYNDSGEGAKINRIAKDLKIAPSSVFEEVSHLEEKG 48 usage_01899.pdb 1 ---SMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 usage_01900.pdb 1 ---SMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDE 46 y I IAe l s v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################