################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:56 2021 # Report_file: c_1226_187.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00289.pdb # 2: usage_00551.pdb # 3: usage_00926.pdb # 4: usage_01066.pdb # # Length: 63 # Identity: 2/ 63 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 63 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 63 ( 61.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00289.pdb 1 FGTFKVNHRAE------------------------ANVPAFVSGKALKD--------AVK 28 usage_00551.pdb 1 FGNFEVRERAARKGR-NPQTGEEMEI-----PA--SKVPAFKPGKALKD--------AVK 44 usage_00926.pdb 1 -GVFEQRRRAARVARNPRTG------ETVKVKP--TSVPAFRPGAQFKA--------VVS 43 usage_01066.pdb 1 ---FIRFTVTN----------------------KEGVKIRTKIPLSKVHGLDVKNVQLV- 34 F ra vpaf g k V usage_00289.pdb --- usage_00551.pdb --- usage_00926.pdb 44 G-- 44 usage_01066.pdb 35 -DA 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################