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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:12:39 2021
# Report_file: c_0461_109.html
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#====================================
# Aligned_structures: 9
#   1: usage_00002.pdb
#   2: usage_00893.pdb
#   3: usage_00903.pdb
#   4: usage_01161.pdb
#   5: usage_01162.pdb
#   6: usage_01199.pdb
#   7: usage_01200.pdb
#   8: usage_01201.pdb
#   9: usage_01202.pdb
#
# Length:         97
# Identity:        2/ 97 (  2.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      6/ 97 (  6.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/ 97 ( 36.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00002.pdb         1  --IGLLLPDM-SNPFFTLIARGVEDVALAHGYQVLIGNSD-----NDI-KKAQGYLATFV   51
usage_00893.pdb         1  NVIAAVVSSVR-TNFAQQILDGIQEEAHKNGYNLIIVY-----------HALLT----AI   44
usage_00903.pdb         1  GNIGVLVSRV-TNPFFAGLFDAIERELHAHGYQVMITQTY-----DDP-EAEERFLKQLK   53
usage_01161.pdb         1  KLIAVIVANI-DDYFSTELFKGISSILESRGYIGVLFDAN-----ADI-EREKTLLRAIG   53
usage_01162.pdb         1  --IAVIVANI-DDYFSTELFKGISSILESRGYIGVLFDAN-----ADI-EREKTLLRAIG   51
usage_01199.pdb         1  KTIGVIVPDI-TNPFFAQLIRGIESVLYKENFILILCNADQDVTRE-H-EYLTE----LI   53
usage_01200.pdb         1  KTIGVIVPDI-TNPFFAQLIRGIESVLYKENFILILCNADQDVTRE-H-EYLTE----LI   53
usage_01201.pdb         1  KTIGVLVPDI-TNPFFSTL-RGIEDILYKQNFVTILCNAD-----S--IEYLAE----LT   47
usage_01202.pdb         1  KTIGLMVPNI-SNPFFNQMASVIEEYAKNKGYTLFLCNTD-----DDK-EKEKTYLEVLQ   53
                             I   v       F       i                                     

usage_00002.pdb        52  SHNCTGMISTAF---NENIIENTLTDHH-I-PFVFID   83
usage_00893.pdb        45  ERPVGIL-LLSI--ANLQLLQSS--------PYCFLS   70
usage_00903.pdb        54  SRELDGVILAS-VE-APDRVMAVAKA-FPGRVVV-VN   86
usage_01161.pdb        54  SRGFDGLILQS-FS-NPQTVQEILHQ-Q-M-PVVSVD   85
usage_01162.pdb        52  SRGFDGLILQS-FS-NPQTVQEILHQ-Q-M-PVVSVD   83
usage_01199.pdb        54  RRSVDGFVIAS-SEISNQTINETLRAKK-I-PFIVLD   87
usage_01200.pdb        54  RRSVDGFVIAS-SEISNQTINETLRAKK-I-PFIVLD   87
usage_01201.pdb        48  RRGVDGFIIAT-SAVSTDAINENLKKQG-R-PFIVLD   81
usage_01202.pdb        54  SHRVAGIIASR-SQ-CEDEYANI----D-I-PVVAF-   81
                                g                         p     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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