################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:53 2021 # Report_file: c_0039_12.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00047.pdb # 4: usage_00061.pdb # 5: usage_00157.pdb # # Length: 231 # Identity: 60/231 ( 26.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 192/231 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/231 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYG-YSVSAET 59 usage_00040.pdb 1 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYG-YSVSAET 59 usage_00047.pdb 1 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAET 60 usage_00061.pdb 1 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAET 60 usage_00157.pdb 1 YRRLNKSIENYLKLKDIGIVLGNGASEIIELSIS-LF----EKILIIVPSYAEYEINAKK 55 pkavienyaqYagvKpeqvlvsrGAdEgIELlIr fc daILycpPtYg YsvsAet usage_00039.pdb 60 IGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 119 usage_00040.pdb 60 IGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 119 usage_00047.pdb 61 IGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 120 usage_00061.pdb 61 IGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 120 usage_00157.pdb 56 HGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 115 iGVecrtvptldNwqlDlqgIsdKlDgVkvVyvcsPNNPtGqLINpqdFrtlLeLtrgKa usage_00039.pdb 120 IVVADEAYIEFC--PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLL 176 usage_00040.pdb 120 IVVADEAYIEFC--PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLL 176 usage_00047.pdb 121 IVVADEAYIEFC--PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLL 177 usage_00061.pdb 121 IVVADEAYIEFC--PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLL 177 usage_00157.pdb 116 TIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKI 175 ivvaDEAyIEFc PqaSlaGwlaeYphLaIlRtlsKaFAlaGlRcGftla NeEvinll usage_00039.pdb 177 -KVIAPYPLSTPVADIAAQALSP-QGIVA-RERVAQIIAEREYLIAALKEI 224 usage_00040.pdb 177 -KVIAPYPLSTPVADIAAQALSP-QGIVA-RERVAQIIAEREYLIAALKEI 224 usage_00047.pdb 178 MKVIAPYPLSTPVADIAAQALSP-QGIVAMRERVAQIIAEREYLIAALKEI 227 usage_00061.pdb 178 MKVIAPYPLSTPVADIAAQALS----------------------------- 199 usage_00157.pdb 176 KAKQNPWNINCFAEMAAINCLKDTNY--I-EESLLWIKKERKRFIEELNKI 223 kviaPyplstpvadiAaqaLs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################