################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:14 2021 # Report_file: c_1491_230.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00141.pdb # 2: usage_00247.pdb # 3: usage_01004.pdb # 4: usage_02188.pdb # # Length: 48 # Identity: 1/ 48 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 48 ( 56.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 48 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 TPDDALHDWLWLLADTKKKRYKTD---R------KFLLYTDYIEQN-- 37 usage_00247.pdb 1 ADRKIQDYRSAYNDIRDWQRRE--TTD-WDDVVFE-VDLLK-S---Q- 39 usage_01004.pdb 1 ADRKIQDYRSAYNDIRDWQRREKETTD-WDDVVFE-VDLLK-S---QE 42 usage_02188.pdb 1 -DRKIQDYRSAYNDIRDWQRR-------WDDVVFE-VDLLK-S---Q- 34 drkiqdyrsayndirdwqRr e vdllk s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################