################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:47 2021 # Report_file: c_0653_74.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00098.pdb # 2: usage_00913.pdb # 3: usage_00914.pdb # 4: usage_01178.pdb # 5: usage_01179.pdb # 6: usage_01180.pdb # 7: usage_01181.pdb # # Length: 65 # Identity: 9/ 65 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 65 ( 64.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 65 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 TLYTVSSYTSA----------DATVNFAYDTGTGISKTLTIPFKNRYKYSSIDYNPLEKK 50 usage_00913.pdb 1 ---LYVV----K---------SNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 44 usage_00914.pdb 1 --ILYVV----K---------SNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 45 usage_01178.pdb 1 -LYVVKS----VYE-------GNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 48 usage_01179.pdb 1 ILYVVKS----VYEDDDNEATGNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 56 usage_01180.pdb 1 -LYVVKS----VYEDDDNEATGNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 55 usage_01181.pdb 1 ILYVVKS----VYEDDDNEATGNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDN 56 nkidyiYnTdqskdslvdvPFpNsYqYiaavdynprdn usage_00098.pdb 51 -LFAW 54 usage_00913.pdb 45 LLYVW 49 usage_00914.pdb 46 LLYVW 50 usage_01178.pdb 49 LLYVW 53 usage_01179.pdb 57 LLYVW 61 usage_01180.pdb 56 LLYVW 60 usage_01181.pdb 57 LLYVW 61 LyvW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################