################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:20 2021 # Report_file: c_1312_30.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00567.pdb # 8: usage_00700.pdb # 9: usage_00831.pdb # 10: usage_00935.pdb # 11: usage_00936.pdb # 12: usage_00937.pdb # 13: usage_00938.pdb # 14: usage_00954.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 49 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 49 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00034.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00035.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00036.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00037.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00038.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00567.pdb 1 GAQLARQIGASLND--DILFGVFAQSKPD---SAEPMDRSAMCAFPI-- 42 usage_00700.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00831.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00935.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00936.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00937.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00938.pdb 1 -EALAQAFNISSDE--DVLFAIFSKG---QKQYHHPPDDSALCAFPI-- 41 usage_00954.pdb 1 TSAEAEEWGVDDDQRRFFVRFGVSKA---NYG-----APFADRWFRRHD 41 alA s d d lf fsk d sA caFpi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################