################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:03:57 2021 # Report_file: c_0514_72.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00145.pdb # 2: usage_00146.pdb # 3: usage_00423.pdb # 4: usage_00424.pdb # 5: usage_00488.pdb # 6: usage_00489.pdb # 7: usage_00490.pdb # 8: usage_00546.pdb # 9: usage_00547.pdb # 10: usage_00548.pdb # 11: usage_00624.pdb # 12: usage_00643.pdb # 13: usage_00644.pdb # 14: usage_00645.pdb # 15: usage_00646.pdb # 16: usage_00647.pdb # 17: usage_00648.pdb # 18: usage_00649.pdb # 19: usage_00650.pdb # 20: usage_00651.pdb # 21: usage_00652.pdb # 22: usage_00653.pdb # 23: usage_00654.pdb # 24: usage_00662.pdb # # Length: 97 # Identity: 35/ 97 ( 36.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 97 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 97 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 -PK-ETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVP-AGGSLGGLDALL 57 usage_00146.pdb 1 -PK-ETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVP-AGGSLGGLDALL 57 usage_00423.pdb 1 -PE-AMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLL 58 usage_00424.pdb 1 -PE-AMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLL 58 usage_00488.pdb 1 ---PDKFDYAETAKERGLKVIIAGAGGAAHLPG-VAAKTTLPVLGVPVKSSTLNGQDSLL 56 usage_00489.pdb 1 ---PDKFDYAETAKERGLKVIIAGAGGAAHLPG-VAAKTTLPVLGVPVKSSTLNGQDSLL 56 usage_00490.pdb 1 ---PDKFDYAETAKERGLKVIIAGAGGAAHLPG-VAAKTTLPVLGVPVKSSTLNGQDSLL 56 usage_00546.pdb 1 MPD-EMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLH 59 usage_00547.pdb 1 MPD-EMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLH 59 usage_00548.pdb 1 MPD-EMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLH 59 usage_00624.pdb 1 -PD-YMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 58 usage_00643.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00644.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00645.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00646.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00647.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00648.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00649.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00650.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00651.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00652.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00653.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00654.pdb 1 -----------TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLL 49 usage_00662.pdb 1 -----------EARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLL 49 A RG IA AG AAHL G Aa T PV GVP L G D L usage_00145.pdb 58 STVQ-PGGVPVACTAIGKAGAKNAAILAAQIIA---- 89 usage_00146.pdb 58 STVQ-PGGVPVACTAIGKAGAKNAAILAAQIIA---- 89 usage_00423.pdb 59 SIVQMPAGVPVATVSIG--GAGNAGLLAVRMLGAANP 93 usage_00424.pdb 59 SIVQMPAGVPVATVSIG--GAGNAGLLAVRMLGAANP 93 usage_00488.pdb 57 SIVQ-PAGIPVATFA-IGAGAKNAALFAASIL----- 86 usage_00489.pdb 57 SIVQ-PAGIPVATFA-IGAGAKNAALFAASIL----- 86 usage_00490.pdb 57 SIVQ-PAGIPVATFA-IGAGAKNAALFAASIL----- 86 usage_00546.pdb 60 SIVQMPKGVPVATFAIGEAGAANAALFAVSILS---- 92 usage_00547.pdb 60 SIVQMPKGVPVATFAIGEAGAANAALFAVSILSG--- 93 usage_00548.pdb 60 SIVQMPKGVPVATFAIGEAGAANAALFAVSILS---- 92 usage_00624.pdb 59 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFH- 94 usage_00643.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00644.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00645.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00646.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00647.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG---- 82 usage_00648.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00649.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00650.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00651.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00652.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00653.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL----- 81 usage_00654.pdb 50 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG---- 82 usage_00662.pdb 50 SIVQMPGGIPVATTAIGAAGAKNAGILAARMLS---- 82 S VQ P G PVA G NA A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################