################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:33 2021 # Report_file: c_0314_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00088.pdb # 2: usage_00309.pdb # 3: usage_00310.pdb # 4: usage_00329.pdb # 5: usage_00344.pdb # 6: usage_00345.pdb # 7: usage_00346.pdb # 8: usage_00347.pdb # 9: usage_00351.pdb # 10: usage_00399.pdb # 11: usage_00534.pdb # 12: usage_00535.pdb # 13: usage_00571.pdb # # Length: 135 # Identity: 7/135 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/135 ( 25.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/135 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 -HQTTQLAMLGIERAMV--KPLTVADVGTGSGILAIAAHKLGAKSVLATDISD-ESMTAA 56 usage_00309.pdb 1 DRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 59 usage_00310.pdb 1 ----TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 55 usage_00329.pdb 1 ---RTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 56 usage_00344.pdb 1 ----TEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 55 usage_00345.pdb 1 ----TEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 55 usage_00346.pdb 1 ---RTEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 56 usage_00347.pdb 1 ---RTEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 56 usage_00351.pdb 1 -QDRTDHYAQALRTVLL--PGSVCLCV-SDGSLLSMLAHHLGAEQVFTVESSVASYRLMK 56 usage_00399.pdb 1 ----TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 55 usage_00534.pdb 1 DRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 59 usage_00535.pdb 1 ----TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR 55 usage_00571.pdb 1 DRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATK-MADHAR 59 t y g tvldV g giL i GA V ave s a usage_00088.pdb 57 EENAALNGIYD-IALQKTSLL-AD---V-DGKFDLIVANIL----A------EILLDLIP 100 usage_00309.pdb 60 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 110 usage_00310.pdb 56 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 106 usage_00329.pdb 57 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 107 usage_00344.pdb 56 EVVRL-NGLEDRVHVLPGPVETVE---L-PERVDAIVSEWM---GYGLLHE-SMLSSVLH 106 usage_00345.pdb 56 EVVRL-NGLEDRVHVLPGPVETVE---L-PERVDAIVSEWM---GYGLLHE-SMLSSVLH 106 usage_00346.pdb 57 EVVRL-NGLEDRVHVLPGPVETVE---L-PERVDAIVSEWM---GYGLLHE-SMLSSVLH 107 usage_00347.pdb 57 EVVRL-NGLEDRVHVLPGPVETVE---L-PERVDAIVSEWM---GYGLLHE-SMLSSVLH 107 usage_00351.pdb 57 RIFKV-NHLEDKISVINKRPELLTAADLEGKKVSLLLGEPFFTTSLLPWHNLYFWYVRTS 115 usage_00399.pdb 56 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 106 usage_00534.pdb 60 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 110 usage_00535.pdb 56 EVVRF-NGLEDRVHVLPGPVETVE---L-PEQVDAIVSEWM---GYGLLHE-SMLSSVLH 106 usage_00571.pdb 60 ALVKA-NNLDHIVEVIEGSVEDIS---L-PEKVDVIISEWM---GYFLLRE-SMFDSVIS 110 N l d v e l vd i e usage_00088.pdb 101 QLDSHLNEDGQVIFS 115 usage_00309.pdb 111 ARTKWLKEGGLLLP- 124 usage_00310.pdb 107 ARTKWLKEGGLLLP- 120 usage_00329.pdb 108 ARTKWLKEGGLLLP- 121 usage_00344.pdb 107 ARTKWLKEGGLLLP- 120 usage_00345.pdb 107 ARTKWLKEGGLLLP- 120 usage_00346.pdb 108 ARTKWLKEGGLLLP- 121 usage_00347.pdb 108 ARTKWLKEGGLLLP- 121 usage_00351.pdb 116 V-DQHLAPGAVVMP- 128 usage_00399.pdb 107 ARTKWLKEGGLLLP- 120 usage_00534.pdb 111 ARTKWLKEGGLLLP- 124 usage_00535.pdb 107 ARTKWLKEGGLLLP- 120 usage_00571.pdb 111 ARDRWLKPTGVMYP- 124 L g p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################