################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:40 2021 # Report_file: c_0791_34.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00046.pdb # 2: usage_00172.pdb # 3: usage_00364.pdb # 4: usage_00365.pdb # 5: usage_00379.pdb # 6: usage_00880.pdb # # Length: 72 # Identity: 14/ 72 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 72 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 72 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 IALGTGT----KWKQAQVSTELVDNILLGLKLGFRHIDTAEAYNTQKEVGEALKRT---- 52 usage_00172.pdb 1 -GLGTYSEPKST-P----KGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEG 54 usage_00364.pdb 1 -GLGTYSEPKST-P----KGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEG 54 usage_00365.pdb 1 -GLGTYSEPKST-P----KGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEG 54 usage_00379.pdb 1 -GFGCWK----L-A----NATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEG 50 usage_00880.pdb 1 -GLGTYSEPKST-P----KGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEG 54 glGt v ai GyRhiDgA Y ne EVGea usage_00046.pdb 53 DVPREDIWVTTK 64 usage_00172.pdb 55 KVRREDIFYCGK 66 usage_00364.pdb 55 KVRREDIFYCGK 66 usage_00365.pdb 55 KVRREDIFYCGK 66 usage_00379.pdb 51 LVKREEIFLTSK 62 usage_00880.pdb 55 KVRREDIFYCGK 66 V REdIf K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################