################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:43 2021 # Report_file: c_0882_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00012.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00029.pdb # # Length: 93 # Identity: 14/ 93 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 93 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 93 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---LALGKAVFDGNCAACHAGGGNNVIPDHTLQKAAIEQFLDGG-----F-NIEAIVYQI 51 usage_00012.pdb 1 ---LALGAQVFNGNCAACHMGGRNSVMPEKTLDKAALEQYLDGG-----F-KVESIIYQV 51 usage_00018.pdb 1 -----EGAVLFGQHCAGCHVNGGNIIRRGKNLKLATLKRQ---GL----D-STEAIASIA 47 usage_00019.pdb 1 AELLADGKKVFAGNCAACHLGGNNSVLADKTLKKDAIEKYLEGG-----L-TLEAIKYQV 54 usage_00023.pdb 1 --DAAAGAQVFAANCAACHAGGNNAVMPTKTLKADALKTYLAGY-KDGSKSLEEAVAYQV 57 usage_00024.pdb 1 --DAAAGAQVFAANCAACHAGGNNAVMPTKTLKADALKTYLAGY-KDGSKSLEEAVAYQV 57 usage_00025.pdb 1 --DAAAGAQVFAANCAACHAGGNNAVMPTKTLKADALKTYLAGY-KDGSKSLEEAVAYVV 57 usage_00029.pdb 1 --DVGAGEQIFNANCAACHAGGQNVIMPEKTLEKEALDQYLAGG-----R-TEKSIISQV 52 G F nCAaCH gG N ktL a e usage_00001.pdb 52 ENGKGAMPAWDGRLDEDEIAGVAAYVYDQAAG- 83 usage_00012.pdb 52 ENGKGAMPAWADRLSEEEIQAVAEYVFKQATDA 84 usage_00018.pdb 48 RKGIGQMSGYGDKLGEGGDQLVAGWILEQAQNA 80 usage_00019.pdb 55 NNGKGAMPAWADRLDEDDIEAVSNYVYDQAVNS 87 usage_00023.pdb 58 TNGQGAMPAFGGRLSDADIANVAAYIADQAENN 90 usage_00024.pdb 58 TNGQGAMPAFGGRLSDADIANVAAYIADQAENN 90 usage_00025.pdb 58 TNGQGAMPAFGGRLSDADIANVAAYIADQAENN 90 usage_00029.pdb 53 TGGKNAMPAFGGRLSDEEIANVAAYVLASAEAG 85 G gaMpa rL i Va y qA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################