################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:22 2021 # Report_file: c_0670_63.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00142.pdb # 4: usage_00329.pdb # # Length: 74 # Identity: 1/ 74 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 74 ( 9.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 74 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 K-SRFGVFL-K-FKDT-KNN-VFVGYDKD-GWFWEYK----SPT---TSTWYRGSRVAAP 47 usage_00025.pdb 1 K-SRFGVFL-K-FKDT-KNN-VFVGYDKD-GWFWEYK----------TSTWYRGSRVAAP 44 usage_00142.pdb 1 ---DDPAIW-LDPKN-PQN-SKLITTNKKSGLAVYSLEGKM--------LHSYHT----- 41 usage_00329.pdb 1 -IKSDMGIFLE------LN--YCWITSDN-KLILWNI----N--NSSEYHCIDEI----- 39 N k g usage_00024.pdb 48 ETGST-NRLSITL- 59 usage_00025.pdb 45 ETGST-NRLSITL- 56 usage_00142.pdb 42 --G-KLNNVDIRY- 51 usage_00329.pdb 40 --EHT-ILKVK--L 48 g t n i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################