################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:40 2021 # Report_file: c_1304_89.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00385.pdb # 2: usage_00478.pdb # 3: usage_00555.pdb # 4: usage_00631.pdb # 5: usage_00642.pdb # 6: usage_00678.pdb # 7: usage_00848.pdb # 8: usage_00849.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 40 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 40 ( 72.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00385.pdb 1 VK-ELKCYVNCVM---EM-----MQTMKK--GKLNYD--- 26 usage_00478.pdb 1 -D-PAAGEKVFGK---CKACHKLDG-ND------GV---- 24 usage_00555.pdb 1 -DPAKGEAV--FKK--CMACHRVGPDAKNLV--------- 26 usage_00631.pdb 1 ---VEKGKKIFVQR--CAQCHTVEKGGKNKT--------- 26 usage_00642.pdb 1 ---AEDLETARVYGLP--------LLKTVDEEGK---LLV 26 usage_00678.pdb 1 -S-AKKGATLFKTR--CLQCHTVEKGGPHKV--------- 27 usage_00848.pdb 1 ---VEKGKKIFVQK--CAQCHTVEKGGKHKT--------- 26 usage_00849.pdb 1 ---VEKGKKIFVQK--CAQCHTVEKGGKHKT--------- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################