################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:29 2021 # Report_file: c_0189_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00019.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00151.pdb # 6: usage_00474.pdb # 7: usage_00682.pdb # # Length: 230 # Identity: 207/230 ( 90.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 207/230 ( 90.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/230 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 60 usage_00078.pdb 1 --DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 58 usage_00079.pdb 1 --DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 58 usage_00080.pdb 1 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 60 usage_00151.pdb 1 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 60 usage_00474.pdb 1 -LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 59 usage_00682.pdb 1 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV 60 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV usage_00019.pdb 61 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRDEV-------T 113 usage_00078.pdb 59 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF-------G------T 105 usage_00079.pdb 59 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG------LSR----T 108 usage_00080.pdb 61 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRDE--------- 111 usage_00151.pdb 61 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG------L------T 108 usage_00474.pdb 60 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG------LS-RYIVT 112 usage_00682.pdb 61 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG------LS-RY--- 110 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF usage_00019.pdb 114 R---LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 170 usage_00078.pdb 106 R---LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 162 usage_00079.pdb 109 R---LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 165 usage_00080.pdb 112 ----LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 167 usage_00151.pdb 109 R---LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 165 usage_00474.pdb 113 R---LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 169 usage_00682.pdb 111 -IEDLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 169 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD usage_00019.pdb 171 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA-- 218 usage_00078.pdb 163 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 212 usage_00079.pdb 166 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA-- 213 usage_00080.pdb 168 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA-- 215 usage_00151.pdb 166 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 215 usage_00474.pdb 170 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 219 usage_00682.pdb 170 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM- 218 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################