################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:12 2021 # Report_file: c_0669_114.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00299.pdb # 2: usage_00300.pdb # 3: usage_00301.pdb # 4: usage_00345.pdb # 5: usage_00489.pdb # 6: usage_01176.pdb # # Length: 73 # Identity: 4/ 73 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 73 ( 12.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 73 ( 27.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00299.pdb 1 --TAKHDTANNLITYTFTDYVDRFNSVQMGINYSIYMDADTIPVSKNDVEFNVTIGNDTT 58 usage_00300.pdb 1 --TAKHDTANNLITYTFTDYVDRFNSVQG-INYSIY-DADTIPVSKNDVEFNVTIGNDTT 56 usage_00301.pdb 1 --TAKHDTANNLITYTFTDYVDRFNSVQG-INYSIY-DADTIPVSKNDVEFNVTIGNDTT 56 usage_00345.pdb 1 A-TGTYDNTNKQITYTF----DKYENIKAHLKLTSYIDKSKVPNNNTKLDVEYKTALSSV 55 usage_00489.pdb 1 -ANGVI-DSDGNVIYTFTDYVNTKCDVKATLTMPAYIDPENVK-KTGNVTLATGIGSTTA 57 usage_01176.pdb 1 -ATGEV-LEGGKIRYTFTNDIEDKVDVTAELEINLFIDPKTVQ-TNGNQTITSTLNEEQT 57 t i YTF v y D usage_00299.pdb 59 KTTAN-------- 63 usage_00300.pdb 57 KTTAN-------- 61 usage_00301.pdb 57 KTTAN-------- 61 usage_00345.pdb 56 NKTITVEYQKPNE 68 usage_00489.pdb 58 NKTVLVDY----- 65 usage_01176.pdb 58 SKE---------- 60 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################