################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:07 2021 # Report_file: c_0195_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00002.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00058.pdb # # Length: 177 # Identity: 55/177 ( 31.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 131/177 ( 74.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/177 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 TTEQINTAYGSGVGQIGLSIMRVRIDPDSSKWNIQLPSARQAVSLGAKIMATPWSPPAYM 60 usage_00038.pdb 1 TAAQRETAFGNGQNQLGFSILRIHVDENRNNWYKEVETAKSAVKHGAIVFASPWNPPSDM 60 usage_00039.pdb 1 TAAQRETAFGNGQNQLGFSILRIHVDENRNNWYKEVETAKSAVKHGAIVFASPWNPPSDM 60 usage_00058.pdb 1 TPQQRDTAFGNGEGQLGFTILRIHVDENRNNWSKEVATARRAIELGAIVSASPWNPPSNM 60 T Qr TAfGnG QlGfsIlRihvDenrnnW kev tA Av GAiv AsPWnPPs M usage_00002.pdb 61 KSN----NSLINGGRLLPANYSAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESC 116 usage_00038.pdb 61 VETFNRNGDTSA-KRLKYNKYAAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHE--WT 117 usage_00039.pdb 61 VET------------FNR--YAAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHE--WT 104 usage_00058.pdb 61 VETFTRNGVPNQ-KRLRYDKYGDYVQHLNDFVAYMKSNGVDLYAISVQNEPDYAHE--WT 117 vet l Y aY qHLnDFv Mk NGv LYAISvQNEPDyahe wt usage_00002.pdb 117 EWSGDEFKSYLKSQGSKFGSLKVIVAESLGFNPALTDPVLKDSDASKYVSIIGGHLY 173 usage_00038.pdb 118 WWTPQEILRFMRENAGSI-NARVIAPESFQYLKNLSDPILNDPQALANMDILGTHLY 173 usage_00039.pdb 105 WWTPQEILRFM-ENAGSI-NARVIAPESFQYLKNLSDPILNDPQALANMDILGTHLY 159 usage_00058.pdb 118 WWTPQEMLRFMRDYAGQI-NCRVMAPESFQYLKNMSDPILNDPQALANLDILGAHFY 173 wWtpqE lrfm ag i n rViapESfqylknlsDPiLnDpqAlan dIlG HlY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################