################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:17 2021 # Report_file: c_1299_66.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00243.pdb # 2: usage_00244.pdb # 3: usage_00245.pdb # 4: usage_00246.pdb # 5: usage_00247.pdb # 6: usage_00248.pdb # 7: usage_00403.pdb # 8: usage_00404.pdb # 9: usage_00405.pdb # 10: usage_00410.pdb # 11: usage_00411.pdb # 12: usage_00414.pdb # 13: usage_00415.pdb # 14: usage_00416.pdb # 15: usage_01206.pdb # # Length: 31 # Identity: 18/ 31 ( 58.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 31 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 31 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00243.pdb 1 PKTNEDMSLSLGEHEVERDRA---LERVR-- 26 usage_00244.pdb 1 PKTNEDMSLSLGEHEVERDRYA--LERVR-- 27 usage_00245.pdb 1 PKTNEDMSLSLGEHEVERDAL---ERVR--- 25 usage_00246.pdb 1 PKTNEDMSLSLGEHEVERDRA---LERVR-- 26 usage_00247.pdb 1 PKTNEDMSLSLGEHEVERDRA---LERVR-- 26 usage_00248.pdb 1 PKTNEDMSLSLGEHEVERDRA---LERVR-- 26 usage_00403.pdb 1 PKTNEDMSLSLGEHEVERDAL---ERVR--- 25 usage_00404.pdb 1 PKTNEDMSLSLGEHEVERDRL---ERVR--- 25 usage_00405.pdb 1 PKTNEDMSLSLGEHEVERDL----ERVR--- 24 usage_00410.pdb 1 PKTNEDMSLSLGEHEVERDRL---ERVRE-- 26 usage_00411.pdb 1 PKTNEDMSLSLGEHEVERDRA---LERVR-- 26 usage_00414.pdb 1 PKTNEDMSLSLGEHEVERDRL---ERVRE-- 26 usage_00415.pdb 1 PKTNEDMSLSLGEHEVERE-----RVRE--- 23 usage_00416.pdb 1 PKTNEDMSLSLGEHEVERDE----RVRE--- 24 usage_01206.pdb 1 PKTNEDMSLSLGEHEVERDRY-SGRALERVR 30 PKTNEDMSLSLGEHEVERd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################