################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:15 2021 # Report_file: c_1057_56.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00330.pdb # 2: usage_00495.pdb # 3: usage_00496.pdb # # Length: 65 # Identity: 6/ 65 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 65 ( 67.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 65 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00330.pdb 1 ----NTVLGYFIGRIYLYLTKV---GIS-PD-KLRFRQHME-DCWDAESKTS--YGWIEI 48 usage_00495.pdb 1 GDKLNEYRTKVRQLLTKHLQYK---GD-VE-VEQIFDEE--HDHYQIISVGWNNQ-HRIY 52 usage_00496.pdb 1 GDKLNEYRTKVRQLLTKHLQYKPSYGD-VE-VEQIFDEE--HDHYQIISVGWNNQ-HRIY 55 NeyrtkvrqlltkhLqyk Gd e eqiFdee DhyqiiSvgw q hriy usage_00330.pdb 49 VGCAD 53 usage_00495.pdb 53 G---- 53 usage_00496.pdb 56 G---- 56 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################