################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:26 2021 # Report_file: c_0835_53.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00094.pdb # 2: usage_00578.pdb # 3: usage_00579.pdb # 4: usage_00580.pdb # 5: usage_00581.pdb # 6: usage_00582.pdb # 7: usage_00583.pdb # 8: usage_00689.pdb # 9: usage_00690.pdb # 10: usage_01367.pdb # # Length: 71 # Identity: 9/ 71 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 71 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 71 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 --EHVVALCKAAKNKYGFKDFKLK-GGVLRGDEEKVIK-AKKAFPDARDLDPNGA----- 51 usage_00578.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00579.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00580.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00581.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00582.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00583.pdb 1 -MDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 50 usage_00689.pdb 1 -VDDIVAYARLAEHLYKLPIFYLEYSGV-YG-DPSVVDKVKQALDQTQL------FYGGG 51 usage_00690.pdb 1 -VDDIVAYARLAEHLYKLPIFYLEYSGV-YG-DPSVVEKVKQALDQTQL------FYGGG 51 usage_01367.pdb 1 NMDDIVAYARVSEL-LQLPIFYLEYSGV-LG-DIEAVKKTKAVLETSTL------FYGGG 51 ddiVAyar e lpiFyLe sGV G d v K l l usage_00094.pdb 52 -WHLDDAVRYV 61 usage_00578.pdb 51 IKDAETAKQYA 61 usage_00579.pdb 51 IKDAETAKQYA 61 usage_00580.pdb 51 IKDAETAKQYA 61 usage_00581.pdb 51 IKDAETAKQYA 61 usage_00582.pdb 51 IKDAETAKQYA 61 usage_00583.pdb 51 IKDAETAKQYA 61 usage_00689.pdb 52 ITTPEQAEHMA 62 usage_00690.pdb 52 ITTPEQAEHMA 62 usage_01367.pdb 52 IKDAETAKQY- 61 e A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################