################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:09 2021 # Report_file: c_0442_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00066.pdb # 2: usage_00112.pdb # 3: usage_00114.pdb # 4: usage_00116.pdb # 5: usage_00141.pdb # 6: usage_00142.pdb # 7: usage_00144.pdb # 8: usage_00146.pdb # 9: usage_00152.pdb # 10: usage_00169.pdb # 11: usage_00170.pdb # # Length: 91 # Identity: 58/ 91 ( 63.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 91 ( 63.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 91 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 ------DFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIF 54 usage_00112.pdb 1 ----------QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 50 usage_00114.pdb 1 ----------QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 50 usage_00116.pdb 1 ----------QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 50 usage_00141.pdb 1 ----------QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 50 usage_00142.pdb 1 ------------MVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 48 usage_00144.pdb 1 FPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 60 usage_00146.pdb 1 FPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 60 usage_00152.pdb 1 FAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIF 60 usage_00169.pdb 1 ----------QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 50 usage_00170.pdb 1 ------------MVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 48 VGSCDVKFPIRLEGL H FSSYEPELFPGLIYRM KP IVLLIF usage_00066.pdb 55 VSGKIVLTGAKQREEIYQAFEAIYPVLSEF- 84 usage_00112.pdb 51 VSGKVVLTGAKVRAEIYEAFENIYPILKG-- 79 usage_00114.pdb 51 VSGKVVLTGAKVRAEIYEAFENIYPILKG-- 79 usage_00116.pdb 51 VSGKVVLTGAKVRAEIYEAFENIYPILKG-- 79 usage_00141.pdb 51 VSGKVVLTGAKVRAEIYEAFENI-------- 73 usage_00142.pdb 49 VSGKVVLTGAKVRAEIYEAFENIYPILKGFR 79 usage_00144.pdb 61 VSGKVVLTGAKVRAEIYEAFENIYPILKGFR 91 usage_00146.pdb 61 VSGKVVLTGAKVRAEIYEAFENIYPILKGFR 91 usage_00152.pdb 61 VSGKIVLTGAKQREEIYQAFEAIYPVLSEF- 90 usage_00169.pdb 51 VSGKVVLTGAKVRAEIYEAFENI-------- 73 usage_00170.pdb 49 VSGKVVLTGAKVRAEIYEAFENIYPILKGFR 79 VSGK VLTGAK R EIY AFE I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################