################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:27 2021 # Report_file: c_1205_79.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00051.pdb # 2: usage_00056.pdb # 3: usage_00146.pdb # 4: usage_00147.pdb # 5: usage_00222.pdb # 6: usage_00269.pdb # 7: usage_00328.pdb # 8: usage_00438.pdb # 9: usage_00439.pdb # 10: usage_00515.pdb # 11: usage_00517.pdb # 12: usage_00518.pdb # 13: usage_00718.pdb # 14: usage_00906.pdb # 15: usage_01106.pdb # 16: usage_01481.pdb # # Length: 30 # Identity: 1/ 30 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 30 ( 3.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 30 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 RLHAVPAANT----VKFRCPA------GG- 19 usage_00056.pdb 1 -LHAVPAANT----VKFRCPA------GGN 19 usage_00146.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00147.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00222.pdb 1 RLHAVPAANT----VKFRCPA------GG- 19 usage_00269.pdb 1 -VHPVSLPC-----KHVFCYLCVKGAS--- 21 usage_00328.pdb 1 KLLAVPAANT----VRFRCPA------AGN 20 usage_00438.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00439.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00515.pdb 1 KPLELMVAHT----ISLLCPA------QGF 20 usage_00517.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00518.pdb 1 KLHAVPAAKT----VKFKCPS------SGT 20 usage_00718.pdb 1 -PQEFKQGED----AEVVCRV------SSS 19 usage_00906.pdb 1 SSVYCRSL-NRWEPQLPSCAA--------- 20 usage_01106.pdb 1 SSSTCSPG-NTWKPELPKCVR--------- 20 usage_01481.pdb 1 RLHAVPAANT----VKFRCPA------GGN 20 C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################