################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:21 2021 # Report_file: c_0382_6.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00108.pdb # 2: usage_00158.pdb # 3: usage_00228.pdb # 4: usage_00308.pdb # 5: usage_00514.pdb # 6: usage_00516.pdb # 7: usage_00828.pdb # 8: usage_00830.pdb # # Length: 87 # Identity: 5/ 87 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 87 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 87 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 -----DLDWSH--N-NKIIAGALDNGSLELYSTN-EANNAIN-SMARFSNH-SSSVKTVK 49 usage_00158.pdb 1 --FTTHLSYDP--T-TNAIAYPC-GKSAFVRCLDDGD--SKVPPVVQFTGHGSSVVTTVK 52 usage_00228.pdb 1 DV---HLIKDS--DGHQFIITSDRDEHIKISHYP--QC--FI-VDKWLFGH-KHFVSSIC 49 usage_00308.pdb 1 ----FDLAWNESHE--NQVLVAQGDGTLRLFDTT--F--KEF-PIAIFKEH-EREVFSCN 48 usage_00514.pdb 1 -----DLDWSH--N-NKIIAGALDNGSLELYSTN-EANNAIN-SMARFSNH-SSSVKTVK 49 usage_00516.pdb 1 -----DLDWSH--N-NKIIAGALDNGSLELYSTN-EANNAIN-SMARFSNH-SSSVKTVK 49 usage_00828.pdb 1 -----DLDWSH--N-NKIIAGALDNGSLELYSTN-EANNAIN-SMARFSNH-SSSVKTVK 49 usage_00830.pdb 1 -----DLDWSH--N-NKIIAGALDNGSLELYSTN-EANNAIN-SMARFSNH-SSSVKTVK 49 L i f H V usage_00108.pdb 50 FNAK--QDNVLASGGNNGEIFIWD--- 71 usage_00158.pdb 53 FSPIKGS-QYLCSGDESGKVIVWGWTF 78 usage_00228.pdb 50 CG-K---DYLLLSAGGDDKIFAWD--- 69 usage_00308.pdb 49 WNLV--NRQNFLSSSWDGSIKIWS--- 70 usage_00514.pdb 50 FNAK--QDNVLASGGNNGEIFIWD--- 71 usage_00516.pdb 50 FNAK--QDNVLASGGNNGEIFIWD--- 71 usage_00828.pdb 50 FNAK--QDNVLASGGNNGEIFIWD--- 71 usage_00830.pdb 50 FNAK--QDNVLASGGNNGEIFIWD--- 71 l S g i W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################