################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:29 2021 # Report_file: c_0662_76.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00300.pdb # 2: usage_00348.pdb # 3: usage_00355.pdb # # Length: 56 # Identity: 3/ 56 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 56 ( 55.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 56 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00300.pdb 1 ---NKSLGRFQLTGIPPAPRGV-PQIEVTFDIDANGIVHVRAKDLGTNKEQSITIK 52 usage_00348.pdb 1 SPTLELQGTVESPM----T-PSQFATSVDI-SE---R-GLIATGFNNGTVQIS--- 43 usage_00355.pdb 1 ---NNLLGKFELTGIPPAPRGV-PQIEVTFDIDANGILNVSAVDKSTGKENKIT-- 50 n llG feltg p gv pqieVtf id i v A d tgkeq i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################