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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:43:00 2021
# Report_file: c_1023_14.html
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#====================================
# Aligned_structures: 7
#   1: usage_00100.pdb
#   2: usage_00101.pdb
#   3: usage_00102.pdb
#   4: usage_00612.pdb
#   5: usage_01128.pdb
#   6: usage_01129.pdb
#   7: usage_01369.pdb
#
# Length:         63
# Identity:       58/ 63 ( 92.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     58/ 63 ( 92.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            4/ 63 (  6.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00100.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQAGATANRVALEAMILAR   60
usage_00101.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQAGATANRVALEAMILAR   60
usage_00102.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQAGATANRVALEAMILAR   60
usage_00612.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQAGATANRVALEAMILAR   60
usage_01128.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQSGATANRVALEAMILAR   60
usage_01129.pdb         1  RKVMPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQSGATANRVALEAMILAR   60
usage_01369.pdb         1  ---MPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQSGATANRVALEAMILAR   57
                              MPVASGGIHAGQMHQLIHYLGEDVVLQFGGGTIGHPDGIQ GATANRVALEAMILAR

usage_00100.pdb        61  NEN   63
usage_00101.pdb        61  NEN   63
usage_00102.pdb        61  NEN   63
usage_00612.pdb        61  NE-   62
usage_01128.pdb        61  NEN   63
usage_01129.pdb        61  NEN   63
usage_01369.pdb        58  NEN   60
                           NE 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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