################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:52 2021 # Report_file: c_1144_62.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00044.pdb # 2: usage_00134.pdb # 3: usage_00182.pdb # 4: usage_00198.pdb # 5: usage_00201.pdb # 6: usage_00239.pdb # 7: usage_00240.pdb # 8: usage_00241.pdb # 9: usage_00496.pdb # 10: usage_00516.pdb # 11: usage_00526.pdb # 12: usage_00530.pdb # 13: usage_00531.pdb # 14: usage_00859.pdb # # Length: 29 # Identity: 2/ 29 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 29 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 29 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 EWWKARS-LA-TRKEGYIPSNYVARVD-- 25 usage_00134.pdb 1 GWLNGYN-ET-TGERGDFPGTYVEYIGRK 27 usage_00182.pdb 1 DWWEARS-LT-TGETGYIPSNYVAP---- 23 usage_00198.pdb 1 DWWLAHS-LT-TGQTGYIPSNYVAP---- 23 usage_00201.pdb 1 DWWEARS-LT-TGETGYIPSNYVAP---- 23 usage_00239.pdb 1 NWWEGRN-TA-TNEVGWFPCNRVHP---- 23 usage_00240.pdb 1 NWWEGRN-TA-TNEVGWFPCNRVHP---- 23 usage_00241.pdb 1 --RWWKARRA-NGETGIIPSNYVQLID-- 24 usage_00496.pdb 1 -WWKAQS-LT-TGQEGFIPFNFVAKANS- 25 usage_00516.pdb 1 DWWLAHS-LT-TGETGYIPSNYVAPSD-- 25 usage_00526.pdb 1 DWWEARS-LT-TGETGYIPSNYVAPVD-- 25 usage_00530.pdb 1 GWLVAEN-E-SGSKTGLVPEEFVSYIQ-- 25 usage_00531.pdb 1 GWLVAEN-E-SGSKTGLVPEEFVSYIQ-- 25 usage_00859.pdb 1 --DWWKVRTK-NGNIGYIPYNYIEIIK-- 24 G P v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################