################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:48 2021 # Report_file: c_0040_12.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00097.pdb # 2: usage_00098.pdb # 3: usage_00099.pdb # # Length: 230 # Identity: 213/230 ( 92.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 213/230 ( 92.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/230 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 SPHGIASVLGMLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANA 60 usage_00098.pdb 1 -----------------GRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANA 43 usage_00099.pdb 1 SPHGIASVLGMLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANA 60 GRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANA usage_00097.pdb 61 VFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDL 120 usage_00098.pdb 44 VFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDL 103 usage_00099.pdb 61 VFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDL 120 VFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDL usage_00097.pdb 121 IDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSA 180 usage_00098.pdb 104 IDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSA 163 usage_00099.pdb 121 IDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSA 180 IDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSA usage_00097.pdb 181 PNDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSI 230 usage_00098.pdb 164 PNDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSI 213 usage_00099.pdb 181 PNDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSI 230 PNDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################