################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:37 2021 # Report_file: c_0378_76.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00056.pdb # 2: usage_00348.pdb # 3: usage_00369.pdb # 4: usage_00370.pdb # 5: usage_00398.pdb # 6: usage_00512.pdb # # Length: 98 # Identity: 55/ 98 ( 56.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 98 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 98 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 VSSVPT-KLEVVAATPTSLLISWDAR-GEYVVYYRITYGETGG-NSPVQEFTVP-GSSST 56 usage_00348.pdb 1 --------LEVVAATPTSLLISWDAPAVT-VRYYRITYGETGG-NSPVQEFTVPGS-KST 49 usage_00369.pdb 1 -------KLEVVAATPTSLLISWDAPAVT-VDHYVITYGETGAYW-SYQEFTVP-G-SKT 49 usage_00370.pdb 1 -------KLEVVAATPTSLLISWDAPAVT-VDHYVITYGETGAYW-SYQEFTVP-G-SKT 49 usage_00398.pdb 1 ------RDLEVVAATPTSLLISWDAPAVT-VRYYRITYGETGGNS-PVQEFTVP-GSKST 51 usage_00512.pdb 1 VSSVPT-KLEVVAATPTSLLISWDAR-GEYVVYYRITYGETGG-NSPVQEFTVP-GSSST 56 LEVVAATPTSLLISWDA V Y ITYGETG QEFTVP g T usage_00056.pdb 57 ATISGLSPGVDYTITVYARSY--Y-W--GWYSPISIN- 88 usage_00348.pdb 50 ATISGLKPGVDYTITVYAVTGRGDSP--ASSKPISIN- 84 usage_00369.pdb 50 ATISGLKPGVDYTITVYAYWE--H-M--YHYSPISIN- 81 usage_00370.pdb 50 ATISGLKPGVDYTITVYAYWE--H-M--YHYSPISIN- 81 usage_00398.pdb 52 ATISGLKPGVDYTITVYAVTP-RG-DWNEGSKPISINY 87 usage_00512.pdb 57 ATISGLSPGVDYTITVYARSY--Y-W--GWYSPISIN- 88 ATISGL PGVDYTITVYA PISIN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################