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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:12:55 2021
# Report_file: c_1230_104.html
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#====================================
# Aligned_structures: 9
#   1: usage_00005.pdb
#   2: usage_00086.pdb
#   3: usage_00107.pdb
#   4: usage_00108.pdb
#   5: usage_00110.pdb
#   6: usage_00111.pdb
#   7: usage_00205.pdb
#   8: usage_00300.pdb
#   9: usage_01409.pdb
#
# Length:         59
# Identity:       23/ 59 ( 39.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     31/ 59 ( 52.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           10/ 59 ( 16.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  PYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKR-   58
usage_00086.pdb         1  -----VPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLKGIIKKK-   53
usage_00107.pdb         1  ------PCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKK-   52
usage_00108.pdb         1  ------PCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKK-   52
usage_00110.pdb         1  -----VPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKK-   53
usage_00111.pdb         1  -----VPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKK-   53
usage_00205.pdb         1  -----VPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKG   54
usage_00300.pdb         1  PYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLT----   55
usage_01409.pdb         1  ------PCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKK-   52
                                 P  Nv NGG HAg al  QEFMIaP  A  f EAlR GSEVyH L        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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