################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:50 2021 # Report_file: c_0385_30.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00034.pdb # 2: usage_00166.pdb # 3: usage_00203.pdb # 4: usage_00204.pdb # 5: usage_00399.pdb # 6: usage_00418.pdb # # Length: 79 # Identity: 17/ 79 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 79 ( 32.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 79 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 --------PLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYS-SGN-KEDG 50 usage_00166.pdb 1 KEVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYS-SGN-KEDG 58 usage_00203.pdb 1 --------PLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYS-NGD-KEDG 50 usage_00204.pdb 1 --------PLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYS-NGD-KEDG 50 usage_00399.pdb 1 -------LFLSVREGDSSVINCTYTDSSSTYLYWYKQEPGAGLQLLTYIFSNMDMKQDQR 53 usage_00418.pdb 1 -------STLSVQEGDSAVIKCTYSDSASNYFPWYKQELGKRPQLIIDIRSNVGE-KKDQ 52 LSV EG nCTYs f WY Q k p L S g k d usage_00034.pdb 51 RFTAQVDKSSKYISLFIRD 69 usage_00166.pdb 59 RFTAQVDKSSKYISLFIRD 77 usage_00203.pdb 51 RFTAQLNKASQYVSLLIR- 68 usage_00204.pdb 51 RFTAQLNKASQYVSLLIRD 69 usage_00399.pdb 54 KTVLLNKK-DKHLSLRIAD 71 usage_00418.pdb 53 RIAVTLNKTAKHFSLHITE 71 r K SL I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################