################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:50 2021 # Report_file: c_0121_26.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00127.pdb # 2: usage_00166.pdb # 3: usage_00276.pdb # 4: usage_00311.pdb # 5: usage_00442.pdb # 6: usage_00453.pdb # # Length: 125 # Identity: 15/125 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/125 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/125 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00127.pdb 1 KEVEQDPGPLSVPEGAIVSLNCTYSNSAF-QYFMWYRQYSRKGPELLMYTYSS-G-N-KE 56 usage_00166.pdb 1 -KVTQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDS-R-S-EG 56 usage_00276.pdb 1 DSVTQTGGQVALSEEDFLTIHCNYSASGY-PALFWYVQYPGEGPQFLFRASRDKE-K-GS 57 usage_00311.pdb 1 QN-IDQPTEMTATEGAIVQINCTYQTSGF-NGLFWYQQHAGEAPTFLSYNVLD-G-L-EE 55 usage_00442.pdb 1 KEVEQNSGPLSVPEGAIASLNCTYSDRGS-QSFFWYRQYSGKSPELIMFIYSN-G-D-KE 56 usage_00453.pdb 1 -SVAQPEDQVNVAEGNPLTVKCTYSVSGN-PYLFWYVQYPNRGLQFLLKYITG-DNLVKG 57 q eg CtY fWY q usage_00127.pdb 57 D----GRFTAQVDKSSKYISLFIRDSQPSDSATYLCAMRGDS-S---YKLIFGSGTRLLV 108 usage_00166.pdb 57 ADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTLPPPT---DKLIFGKGTRVTV 113 usage_00276.pdb 58 S----RGFEATYNKEATSFHLQKASVQESDSAVYYCALSENYGN---EKITFGAGTKLQV 110 usage_00311.pdb 56 K----GRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVMDSN-----YQLIWGAGTKLII 106 usage_00442.pdb 57 D----GRFTAQLNKASQYVSLLIRDSQPSDSATYLCAVNFGG-G----KLIFGQGTELSV 107 usage_00453.pdb 58 S----YGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRDMN--SGNTPLVFGKGTRLSV 111 F L DSA Y CA l fG GT l v usage_00127.pdb 109 R---- 109 usage_00166.pdb 114 E---- 114 usage_00276.pdb 111 V---- 111 usage_00311.pdb 107 KPDIQ 111 usage_00442.pdb 108 K---- 108 usage_00453.pdb 112 IANIQ 116 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################