################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:33:04 2021 # Report_file: c_1488_325.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00625.pdb # 2: usage_00690.pdb # 3: usage_01056.pdb # 4: usage_01377.pdb # 5: usage_01425.pdb # 6: usage_01426.pdb # 7: usage_01646.pdb # 8: usage_01777.pdb # 9: usage_01778.pdb # 10: usage_02398.pdb # 11: usage_03656.pdb # 12: usage_03657.pdb # 13: usage_03658.pdb # 14: usage_03659.pdb # 15: usage_03660.pdb # 16: usage_03661.pdb # 17: usage_03663.pdb # 18: usage_03664.pdb # 19: usage_03810.pdb # 20: usage_03999.pdb # 21: usage_04102.pdb # 22: usage_04105.pdb # 23: usage_04142.pdb # 24: usage_04521.pdb # 25: usage_05157.pdb # 26: usage_05158.pdb # 27: usage_05219.pdb # 28: usage_06144.pdb # 29: usage_06272.pdb # 30: usage_07002.pdb # 31: usage_07485.pdb # 32: usage_07631.pdb # 33: usage_07738.pdb # 34: usage_07952.pdb # 35: usage_08116.pdb # 36: usage_08790.pdb # # Length: 18 # Identity: 0/ 18 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 18 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 18 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00625.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_00690.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_01056.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_01377.pdb 1 NPDEAVAYGAAVQGAILT 18 usage_01425.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_01426.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_01646.pdb 1 --DVLLEYLAFAQCSVTY 16 usage_01777.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_01778.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_02398.pdb 1 ---WSAFANSIKAAALE- 14 usage_03656.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_03657.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_03658.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_03659.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_03660.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_03661.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_03663.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_03664.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_03810.pdb 1 ---TTALGAALCAGLAA- 14 usage_03999.pdb 1 NPDEAVAYGAAVQAAILM 18 usage_04102.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_04105.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_04142.pdb 1 -RNEAGIVGAAIEIALQH 17 usage_04521.pdb 1 NPDEAVAYGAAVQAAILM 18 usage_05157.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_05158.pdb 1 NPDEAVAYGAAVQAAIL- 17 usage_05219.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_06144.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_06272.pdb 1 NPDEAVAYGAAVQAAILG 18 usage_07002.pdb 1 NPDEAVAYGAAVQA---- 14 usage_07485.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_07631.pdb 1 NPDEAVAYGAAVQAAI-- 16 usage_07738.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_07952.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_08116.pdb 1 NPDEAVAYGAAVQAAILS 18 usage_08790.pdb 1 NPSELQARGAALQASLIQ 18 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################