################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:51 2021 # Report_file: c_0831_40.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00134.pdb # 2: usage_00277.pdb # 3: usage_00358.pdb # 4: usage_00364.pdb # # Length: 93 # Identity: 11/ 93 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 93 ( 30.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 93 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 SRGGLKLEKALAVFN-------LSVE---DITIDIGASTGGFTDVLQ-NGA--------- 40 usage_00277.pdb 1 SRSAFKLLEVNERHQ-------IL--RPGLRVLDCGAAPGAWSQVA-VQ--KVNAAGTDP 48 usage_00358.pdb 1 SRSTLKLEEAFHVFIPADEWDERL--ANGMWAVDLGA-PGGWTYQL-VK--R-N------ 47 usage_00364.pdb 1 SRSTLKLEEAFHVFIPADEWDERL--ANGMWAVDLGACPGGWTYQL-VK--R-N------ 48 SRs lKLeea vf l D GA pGgwt l usage_00134.pdb 41 ----KLVYAVDVGTN-QLVWKLRQDDRVRSEQ- 67 usage_00277.pdb 49 SSPVGFVLGVD-L--LHIF----PLEGATFLCP 74 usage_00358.pdb 48 ----MWVYSVD-N--GPMAQSLMDTGQVTWLR- 72 usage_00364.pdb 49 ----MWVYSVD-N--GPMAQSLMDTGQVTWLR- 73 Vy VD vt l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################