################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:21 2021 # Report_file: c_0427_3.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00013.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00035.pdb # 8: usage_00040.pdb # 9: usage_00050.pdb # 10: usage_00053.pdb # 11: usage_00055.pdb # 12: usage_00074.pdb # # Length: 69 # Identity: 9/ 69 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 69 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 69 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 ---------STLQRGVPSRFGGSGSGTEFTLTISSLQPEDFATYYCQQL-N-SYSLTFGP 49 usage_00017.pdb 1 ---------SNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGIYYCAHN-V-ELPRTFGG 49 usage_00018.pdb 1 ---------STRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQS-Y-NLRTFGGG 49 usage_00029.pdb 1 SPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQW-S-SHPQTFGG 58 usage_00030.pdb 1 SPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQS-Y-NLWTFGGG 58 usage_00031.pdb 1 SPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQS-Y-NLWTFGGG 58 usage_00035.pdb 1 ---------SNLKTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQY-E-NLQFTFGP 49 usage_00040.pdb 1 ----LIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALW-Y-SNHWVFGG 54 usage_00050.pdb 1 ---------NRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGS 51 usage_00053.pdb 1 ---------STRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQS-Y-NLRTFGGG 49 usage_00055.pdb 1 ----LIYKVSNRFSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCFQY-S-HVPWTFGQ 54 usage_00074.pdb 1 ---------SNLESGVPARFSGSGSETDFTLTIDSVETDDAATYYCQQN-N-EDPYTFGG 49 GvP rF gS sg tI D a YyC G usage_00013.pdb 50 GTKVEIKR- 57 usage_00017.pdb 50 GTKL----- 53 usage_00018.pdb 50 TKLEIKRA- 57 usage_00029.pdb 59 GTKLEILRA 67 usage_00030.pdb 59 TKLEIKRA- 66 usage_00031.pdb 59 TKLEIKRA- 66 usage_00035.pdb 50 GTKVDI--- 55 usage_00040.pdb 55 GTGLTVL-- 61 usage_00050.pdb 52 GTKVTVLG- 59 usage_00053.pdb 50 TKLEI---- 54 usage_00055.pdb 55 GTKLQITR- 62 usage_00074.pdb 50 GTKLEIKG- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################