################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:21 2021 # Report_file: c_0372_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00011.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00019.pdb # 9: usage_00020.pdb # # Length: 145 # Identity: 53/145 ( 36.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 128/145 ( 88.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/145 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00002.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00007.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00008.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00011.pdb 1 YEDELAWGAAWLYRATEEQEYLDRAYEFGT-------TTNTA--WAYDWNEKIVGYQLLL 51 usage_00013.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00014.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00019.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 usage_00020.pdb 1 YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLL 60 YqDELvWGAyWLYkATgddsYLakAeyeyd Tdlrs WtiaWddKsyGtyvLL usage_00001.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00002.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00007.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00008.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00011.pdb 52 TTSAGQTDFLPRVENFLRNWFPG----GSVQYTPLGLAWLAQWGPNRYAANAAFIALVSA 107 usage_00013.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00014.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00019.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 usage_00020.pdb 61 AKETGKQKYIDDANRWLDYWTVGVNGQR-VPYSPGGMAVLDTWGALRYAANTAFVALVYA 119 aketGkqkyiddanrwLdyWtvG r VpYsPgGmAvLdtWGalRYAANtAFvALVyA usage_00001.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00002.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00007.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00008.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00011.pdb 108 KYNI---LASESEQFARSQIHYMLG 129 usage_00013.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00014.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00019.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 usage_00020.pdb 120 KVIDDPVRKQRYHDFAVRQINYALG 144 Kvid rkqryhdFAvrQInYaLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################