################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:32 2021 # Report_file: c_1261_149.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_01856.pdb # 2: usage_02205.pdb # 3: usage_02206.pdb # 4: usage_03171.pdb # 5: usage_03359.pdb # 6: usage_03360.pdb # 7: usage_04294.pdb # 8: usage_04295.pdb # 9: usage_04296.pdb # 10: usage_04297.pdb # 11: usage_04298.pdb # 12: usage_04299.pdb # 13: usage_04300.pdb # 14: usage_04301.pdb # 15: usage_04302.pdb # # Length: 52 # Identity: 4/ 52 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 52 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 52 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01856.pdb 1 -----TLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATN 47 usage_02205.pdb 1 -----VLFIDEVH-LDIESFSFLNRALESD------------APVLI-AT-- 31 usage_02206.pdb 1 -----VLFIDEVH-LDIESFSFLNRALESD------------APVLI-AT-- 31 usage_03171.pdb 1 ----GTLMLDELCEMDLDLQSKLLRFIQTGTYQKVGSSKMSSVDVRFVCATN 48 usage_03359.pdb 1 ----GVLFIDEVH-LDIECFSYINRALESD------------LAPIVIASN- 34 usage_03360.pdb 1 ----GVLFIDEVHMLDIECFSYINRALESD------------LAPIVIMASN 36 usage_04294.pdb 1 -----VLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 34 usage_04295.pdb 1 -IIPGVLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMATN 39 usage_04296.pdb 1 -----VLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 34 usage_04297.pdb 1 -IIPGVLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 38 usage_04298.pdb 1 -----VLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 34 usage_04299.pdb 1 -IIPGVLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMATN 39 usage_04300.pdb 1 EIIPGVLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMATN 40 usage_04301.pdb 1 -IIPGVLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 38 usage_04302.pdb 1 -----VLFIDEVHMLDIESFSFLNRALESD------------MAPVLIMAT- 34 Lf DE ld e s R es #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################