################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:47:45 2021 # Report_file: c_0511_3.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00055.pdb # 4: usage_00056.pdb # 5: usage_00057.pdb # 6: usage_00058.pdb # 7: usage_00059.pdb # 8: usage_00060.pdb # 9: usage_00061.pdb # 10: usage_00062.pdb # 11: usage_00063.pdb # 12: usage_00086.pdb # 13: usage_00089.pdb # 14: usage_00090.pdb # 15: usage_00091.pdb # 16: usage_00098.pdb # 17: usage_00099.pdb # # Length: 124 # Identity: 65/124 ( 52.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/124 ( 54.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/124 ( 37.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 DRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFQTVAECRVLQKLGADAVGMSTVPEVI 60 usage_00025.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00055.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00056.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00057.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00058.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00059.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00060.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00061.pdb 1 -RDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 59 usage_00062.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00063.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00086.pdb 1 DRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 60 usage_00089.pdb 1 -RTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVI 59 usage_00090.pdb 1 -RTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVI 59 usage_00091.pdb 1 -RTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVI 59 usage_00098.pdb 1 -RDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 59 usage_00099.pdb 1 -RDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVI 59 R MRQ A ST KQMGEQRELQEGTYVM GP FeTVAECR L LGADAVGMSTVPEVI usage_00024.pdb 61 VARHCGLRVFGFSLITDKVIMDYE---SVLAA--G--------K---QAAQKLEQFVSIL 104 usage_00025.pdb 61 VARHCGLRVFGFSLITNKVIMDY-------EA--G--------K---QAAQKLEQFVSLL 100 usage_00055.pdb 61 VARHCGLRVFGFSLITNKVIMD-------------------------QAAQKLEQFVSLL 95 usage_00056.pdb 61 VARHCGLRVFGFSLITNKVIMD-------------------------QAAQKLEQFVSLL 95 usage_00057.pdb 61 VARHCGLRVFGFSLITNKVIMD-------------------------QAAQKLEQFVSLL 95 usage_00058.pdb 61 VARHCGLRVFGFSLITNKVIMD---------------------K---QAAQKLEQFVSL- 95 usage_00059.pdb 61 VARHCGLRVFGFSLITNKVIMDYE------EA--G--------K---QAAQKLEQFVSLL 101 usage_00060.pdb 61 VARHCGLRVFGFSLITNKVIMDYEHEE-VLEA--G--------K---QAAQKLEQFVSLL 106 usage_00061.pdb 60 VARHCGLRVFGFSLITNKVIMDYE--------SQG--------K---QAAQKLEQFVSLL 100 usage_00062.pdb 61 VARHCGLRVFGFSLITNKVIMDY--------------------K---QAAQKLEQFVSLL 97 usage_00063.pdb 61 VARHCGLRVFGFSLITNKVIMDYE-----------------------QAAQKLEQFVSLL 97 usage_00086.pdb 61 VARHCGLRVFGFSLITNKV-----------------------------AAQKLEQFVSLL 91 usage_00089.pdb 60 VARHCGLRVFGFSLITNKVIMDYE--------------------SLEQAAQKLEQFVSIL 99 usage_00090.pdb 60 VARHCGLRVFGFSLITNKVIMDYE-------------------K---QAAQKLEQFVSIL 97 usage_00091.pdb 60 VARHCGLRVFGFSLITNKVIMDY------------------------QAAQKLEQFVSIL 95 usage_00098.pdb 60 VARHCGLRVFGFSLITNKVIMDYE------------------------AAQKLEQFVSLL 95 usage_00099.pdb 60 VARHCGLRVFGFSLITNK-VIMDS---Q-------GKANHEEV----------------- 91 VARHCGLRVFGFSLITnK usage_00024.pdb 105 MASI 108 usage_00025.pdb 101 MASI 104 usage_00055.pdb 96 MASI 99 usage_00056.pdb 96 MASI 99 usage_00057.pdb 96 MASI 99 usage_00058.pdb ---- usage_00059.pdb 102 MASI 105 usage_00060.pdb 107 MASI 110 usage_00061.pdb 101 MASI 104 usage_00062.pdb 98 MASI 101 usage_00063.pdb 98 MASI 101 usage_00086.pdb 92 MASI 95 usage_00089.pdb 100 MASI 103 usage_00090.pdb 98 MASI 101 usage_00091.pdb 96 MASI 99 usage_00098.pdb 96 MASI 99 usage_00099.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################