################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:16 2021 # Report_file: c_1481_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_01935.pdb # 2: usage_01979.pdb # 3: usage_01980.pdb # 4: usage_01981.pdb # 5: usage_01982.pdb # 6: usage_01983.pdb # 7: usage_02366.pdb # 8: usage_02367.pdb # 9: usage_02368.pdb # 10: usage_02369.pdb # 11: usage_02370.pdb # 12: usage_02371.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 50 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 50 ( 56.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01935.pdb 1 ------------LDEKMKSLDVN---QDSELKFNEYWRLIGELAKEIRKK 35 usage_01979.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_01980.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKDT-------- 38 usage_01981.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_01982.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_01983.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_02366.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_02367.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_02368.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_02369.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKDTDRD----- 41 usage_02370.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 usage_02371.pdb 1 QFSDLEIQAAEIERMRTLMETT-LARHTGK---DAGVIRKD--------- 37 ermrtlmett htgk dagvirkd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################