################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:29 2021 # Report_file: c_1010_25.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00113.pdb # 2: usage_00146.pdb # 3: usage_00147.pdb # 4: usage_00181.pdb # 5: usage_00539.pdb # 6: usage_00629.pdb # # Length: 66 # Identity: 10/ 66 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 66 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 66 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 -HIVALCVLKGGYKFFADLLDYIKALNRNSDRSI---PMTVDFIRL-KSYCND--QST-G 52 usage_00146.pdb 1 -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRLKSYQNDN--ST--G 55 usage_00147.pdb 1 -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRL-KS-------Y-QG 50 usage_00181.pdb 1 -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRL-KSY-QNDNST--G 55 usage_00539.pdb 1 EEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRV-KSY-CNDQST--G 56 usage_00629.pdb 1 ---HILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRV-KSY-CNDQST--G 53 hi C LKGsrgFF L l i yS e f ehyvR ks G usage_00113.pdb 53 DIKVIG 58 usage_00146.pdb 56 QLTVLS 61 usage_00147.pdb 51 QLTVLS 56 usage_00181.pdb 56 QLTVL- 60 usage_00539.pdb 57 TLEIVS 62 usage_00629.pdb 54 TLEIV- 58 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################