################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:50 2021 # Report_file: c_1108_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00231.pdb # 2: usage_00351.pdb # 3: usage_00352.pdb # 4: usage_00353.pdb # 5: usage_00354.pdb # 6: usage_00355.pdb # # Length: 117 # Identity: 57/117 ( 48.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/117 ( 59.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/117 ( 40.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 AAQVKDALTKMRAAALDAQKATPPKLE--DFRHGFDILVGQIDDALKLANEGKVKEAQAA 58 usage_00351.pdb 1 AAQVKDALTKMRAAALDAQK-------MKDFRHGFDILVGQIDDALKLANEGKVKEAQAA 53 usage_00352.pdb 1 AAQVKDALTKMRAAALDAQK-------MKDFRHGFDILVGQIDDALKLANEGKVKEAQAA 53 usage_00353.pdb 1 AAQVKDALTKMRAAALDAQK--------KDFRHGFDILVGQIDDALKLANEGKVKEAQAA 52 usage_00354.pdb 1 AAQVKDALTKMRAAALDAQK--------KDFRHGFDILVGQIDDALKLANEGKVKEAQAA 52 usage_00355.pdb 1 AAQVKDALTKMRAAALDAQK-------MKDFRHGFDILVGQIDDALKLANEGKVKEAQAA 53 AAQVKDALTKMRAAALDAQK DFRHGFDILVGQIDDALKLANEGKVKEAQAA usage_00231.pdb 59 AEQLKTTRN-AYIQKYLRGVGK----------------------------------- 79 usage_00351.pdb 54 AEQLKT--TRNAYIQKYLERARSTLQKEVHAAKSA---------------------- 86 usage_00352.pdb 54 AEQLKT--TRNAYIQKYLERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTF 108 usage_00353.pdb 53 AEQLKT--TRNAYIQKYLERARSTLQKEVHAAKSA---------------------- 85 usage_00354.pdb 53 AEQLKT--TRNAYIQKYLERARSTLQKEVHAAKSA---------------------- 85 usage_00355.pdb 54 AEQLKT--TRNAYIQKYLERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTF 108 AEQLKT t nayiqkylerar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################