################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:56 2021 # Report_file: c_1208_85.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00077.pdb # 2: usage_01281.pdb # 3: usage_01634.pdb # 4: usage_01635.pdb # 5: usage_01740.pdb # 6: usage_02073.pdb # # Length: 44 # Identity: 3/ 44 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 44 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 44 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 -GLWIPEGE-KVKIPVAIKES-------PKNKEILDEAYVMASV 35 usage_01281.pdb 1 E-VYEG-QVS--PLQVAVKT-LPEVYSEQDELDFLMEALIISK- 38 usage_01634.pdb 1 -GIWVPEGE-TVKIPVAIKI-LNET---KANVEFMDEALIMASM 38 usage_01635.pdb 1 -GIWVPEGE-TVKIPVAIKI-LNETTGPKANVEFMDEALIMAS- 40 usage_01740.pdb 1 -GTLLD-ND-GKKIHCAVKS-LNRITDIGEVSQFLTEGIIMKD- 39 usage_02073.pdb 1 -GLWIPEGE-KVKIPVAIKE-LREATSPKANKEILDEAYVMAS- 40 ki vA K Ea m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################