################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:32 2021 # Report_file: c_0888_101.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00006.pdb # 2: usage_00043.pdb # 3: usage_00543.pdb # # Length: 100 # Identity: 6/100 ( 6.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/100 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/100 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 SDAMMNVLAQMISNPNA----------RRELKPAVLSVFGDIASNIGADFIPYLNDIMAL 50 usage_00043.pdb 1 LNDIMALCVAAQNTKP-ENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTI 59 usage_00543.pdb 1 LNDIMALCVAAQNTKP-ENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTI 59 lndiMalcvaaqntkp qikvleAVLdayvgIvaglhdkpealfpyvgti usage_00006.pdb 51 CVAAQNTKPENG-TLE--ALDYQIKVLEAVLDAYVGIVAG 87 usage_00043.pdb 60 -FQFIAQ--VAEDPQLYSEDATSRAAVGLIGDIAAMF--- 93 usage_00543.pdb 60 -FQFIAQ--VAEDPQLYSEDATSRAAVGLIGDIAAMF--- 93 fqfiaq vae pql edatsraavgligDiaamf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################