################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:42 2021 # Report_file: c_0516_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00115.pdb # 2: usage_00116.pdb # 3: usage_00117.pdb # 4: usage_00118.pdb # 5: usage_00119.pdb # 6: usage_00180.pdb # 7: usage_00181.pdb # 8: usage_00184.pdb # 9: usage_00185.pdb # 10: usage_00186.pdb # 11: usage_00248.pdb # # Length: 107 # Identity: 62/107 ( 57.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/107 ( 57.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/107 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00116.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00117.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00118.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00119.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00180.pdb 1 PQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHV 60 usage_00181.pdb 1 PQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHV 60 usage_00184.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00185.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00186.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 usage_00248.pdb 1 PEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYI 60 P VA YWQ VI N QRRRFA II LFNTVTDKKIAI GFAFKK TGDTRESS I usage_00115.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSH---PE-DDQVSRLVTISK 103 usage_00116.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00117.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00118.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00119.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00180.pdb 61 IKHLMEEHAKLSVYDPKVQKSQMLNDLAS---VTSAQDVERLITVES 104 usage_00181.pdb 61 IKHLMEEHAKLSVYDPKVQKSQMLNDLAS---VTSAQDVERLITVES 104 usage_00184.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00185.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00186.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSE-DDQVSRLVTISK 106 usage_00248.pdb 61 SKYLMDEGAHLHIYDPKVPREQIVVDLSH------DDQVSRLVTISK 101 K LM E A L YDPKV Q DL V RL T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################