################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:29 2021 # Report_file: c_1219_64.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01652.pdb # 2: usage_01653.pdb # 3: usage_01656.pdb # 4: usage_01657.pdb # 5: usage_01658.pdb # 6: usage_01776.pdb # 7: usage_01777.pdb # 8: usage_02055.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 46 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 46 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01652.pdb 1 --RRVE-IPKP-DGG-VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 41 usage_01653.pdb 1 --RRVE-IPKP-DGG-VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 41 usage_01656.pdb 1 ----VE-IP-----KPVRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 36 usage_01657.pdb 1 ---RVE-IP-------VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 35 usage_01658.pdb 1 --RRVE-IP---G-G-VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 38 usage_01776.pdb 1 --RRVE-IP-----K-VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 37 usage_01777.pdb 1 PVRRVE-IP-----G-VRNLGVPTVTDRFIQQAIAQVLTPIYEEQF 39 usage_02055.pdb 1 --QKITIPA-NSS-K-QVTVPID----ASRFSKDLLAQ-------- 29 ve ip vrnlgvp rfiqqaiaqvl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################