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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:48 2021
# Report_file: c_1104_32.html
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#====================================
# Aligned_structures: 5
#   1: usage_00298.pdb
#   2: usage_00301.pdb
#   3: usage_00303.pdb
#   4: usage_00306.pdb
#   5: usage_00589.pdb
#
# Length:        121
# Identity:       41/121 ( 33.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     41/121 ( 33.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           80/121 ( 66.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00298.pdb         1  KPVDNYLRIPSNSLLRTILSAIYKDTYDIKKGVGYDFLSVDSKLIRAIVLHVGIEAGIEY   60
usage_00301.pdb         1  -PVDNYLRIPSNSLLRTILSAIYKDTYDIKKGVGYDFLSVDSKLIRAIVLHVGIEAGIEY   59
usage_00303.pdb         1  -PVDNYLRIPSNSLLRTILSAIYKDTYDIKKGVGYDFLSVDSKLIRAIVLHVGIEAGIEY   59
usage_00306.pdb         1  KPVDNYLRIPSNSLLRTILSAIYKDTYDIKKGVGYDFLSVDSKLIRAIVLHVGIEAGIEY   60
usage_00589.pdb         1  -----------------------------------------SKLIRAIVLHVGIEAGIEY   19
                                                                    SKLIRAIVLHVGIEAGIEY

usage_00298.pdb        61  KRTSSNAVFNTKSSYYTLLFNLIQN-----------------------------------   85
usage_00301.pdb        60  KRTSSNAVFNTKSSYYTLLFNLIQ------------------------------------   83
usage_00303.pdb        60  KRTS-NAVFNTKSSYYTLLFNLIQ------------------------------------   82
usage_00306.pdb        61  KRT--NAVFNTKSSYYTLLFNLIQN-----------------------------------   83
usage_00589.pdb        20  KRT--NAVFNTKSSYYTLLFNLIQNGSIEMKYQIILSIVEQLRYPNIHTYWFSFVLMNMF   77
                           KRT  NAVFNTKSSYYTLLFNLIQ                                    

usage_00298.pdb            -     
usage_00301.pdb            -     
usage_00303.pdb            -     
usage_00306.pdb            -     
usage_00589.pdb        78  K   78
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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