################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:32 2021 # Report_file: c_1240_19.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00745.pdb # 2: usage_01505.pdb # 3: usage_01506.pdb # 4: usage_01507.pdb # 5: usage_01508.pdb # 6: usage_01509.pdb # 7: usage_01622.pdb # 8: usage_01923.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 47 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 47 ( 51.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00745.pdb 1 ----NTLFVDK--NLRYHGL-QAFSRTNR-IYDA--TK-TFGNIVTF 36 usage_01505.pdb 1 ----NTLFVDK--NLRYHGLMQAFSRTNR-IYDA--TK-TFGNIVTF 37 usage_01506.pdb 1 PFYFEGTNAYYLMTSDQSNVKQVFSDMKS---------LGLPVVR-T 37 usage_01507.pdb 1 ----NTLFVDK--NLRYHGLMQAFSRTNR-IYDA--TK-TFGNIVTF 37 usage_01508.pdb 1 ----NTLFVDK--NLRYHGLMQAFSRTNR-IYDA--TK-TFGNIVTF 37 usage_01509.pdb 1 ----NTLFVDK--NLRYHGLMQAFSRTNR-IYDA--TK-TFGNIVTF 37 usage_01622.pdb 1 ----DVIIVDS------NFYEKIYNAL-KP----------NGYCVAQ 26 usage_01923.pdb 1 ----KNVVLAR--VVNSSEFKQIVGRGTR-LRE-DYGK-LWFNIIDY 38 q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################