################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:22:19 2021 # Report_file: c_0291_1.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00014.pdb # 9: usage_00015.pdb # 10: usage_00018.pdb # 11: usage_00019.pdb # 12: usage_00020.pdb # 13: usage_00026.pdb # 14: usage_00027.pdb # 15: usage_00028.pdb # 16: usage_00029.pdb # 17: usage_00030.pdb # 18: usage_00031.pdb # 19: usage_00035.pdb # 20: usage_00039.pdb # # Length: 71 # Identity: 28/ 71 ( 39.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 71 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 71 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PSASGTPGQAITISCSGSSSNIGSNPVNWYQQLPGAAPKLLIYADEHRPSGVPDRFSGSK 60 usage_00002.pdb 1 -SVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRPSGVPDRFSGSK 59 usage_00003.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 60 usage_00004.pdb 1 --VSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 58 usage_00011.pdb 1 -SVSAAPGQKVTISCSGSSSNIGNNYVLWYQQFPGTAPKLLIYGNNKRPSGIPDRFSGSK 59 usage_00012.pdb 1 PSASGTPGQRVTISCSGTSSNIGSSTVNWYQQLPGMAPKLLIYRDAMRPSGVPDRFSGSK 60 usage_00013.pdb 1 -SVSAAPGQKVTISCSGSSSNIGNNYVRWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 59 usage_00014.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVRWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 60 usage_00015.pdb 1 -SASATPGQRVTISCSGSSSNIGGNTVNWYQHLPGAAPKLLIHNNDLRPSGVPDRFSGSK 59 usage_00018.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 60 usage_00019.pdb 1 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 60 usage_00020.pdb 1 -SVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK 59 usage_00026.pdb 1 PSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSK 60 usage_00027.pdb 1 -SVSVSPGQTARITCSGD--ALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSS 57 usage_00028.pdb 1 PSVSVSPGQTARITCSGD--ALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSS 58 usage_00029.pdb 1 -SVSAAPGQKVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDDTQRPSGIPDRFSGSK 59 usage_00030.pdb 1 -SVSVSPGQTASITCSGDK--LGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSN 57 usage_00031.pdb 1 -SVSVSPGQTASITCSGDK--LGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSN 57 usage_00035.pdb 1 -SVSAAPGQKVTISCSGSSSNIGNNYVLWYQQFPGTAPKLLIYGNNKRPSGIPDRFSGSK 59 usage_00039.pdb 1 -SASGTPGQSVNISCSGSSSNIGNSYVYWYQQLPGTAPKLLIYRNNRRPSGVPDRFSGSK 59 S PGQ I CSG WYQq PG P l I RPSG P RFSGS usage_00001.pdb 61 SGTSASLAISG 71 usage_00002.pdb 60 SGTSASLAISG 70 usage_00003.pdb 61 SGTSATLGITG 71 usage_00004.pdb 59 SGTSATLGITG 69 usage_00011.pdb 60 SGTSATLGITG 70 usage_00012.pdb 61 SGASASLAIGG 71 usage_00013.pdb 60 SGTSATLGITG 70 usage_00014.pdb 61 SGTSATLGITG 71 usage_00015.pdb 60 SGTSASLAVSG 70 usage_00018.pdb 61 SGTSATLGITG 71 usage_00019.pdb 61 SGTSATLGITG 71 usage_00020.pdb 60 SGTSATLGITG 70 usage_00026.pdb 61 SGTSATLVITG 71 usage_00027.pdb 58 SGTTVTLTISG 68 usage_00028.pdb 59 SGTTVTLTISG 69 usage_00029.pdb 60 SGTSATLAITG 70 usage_00030.pdb 58 SGNTATLTISG 68 usage_00031.pdb 58 SGNTATLTISG 68 usage_00035.pdb 60 SGTSATLGITG 70 usage_00039.pdb 60 SDTSASLAISG 70 Sg L i G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################