################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:23 2021 # Report_file: c_1434_265.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00288.pdb # 2: usage_00289.pdb # 3: usage_02315.pdb # 4: usage_02316.pdb # 5: usage_02317.pdb # 6: usage_02318.pdb # # Length: 60 # Identity: 17/ 60 ( 28.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 60 ( 28.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 60 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 -RGIYAVIESLIAYTRA----PLVLRERIAEMNRVARKVGGPREKEAMRRIIQALES--- 52 usage_00289.pdb 1 -RGIYAVIESLIAYTRAEFSDPLVLRERIAEMNRVARKVGGPREKEAMRRIIQALES--- 56 usage_02315.pdb 1 -RAKHAVIEAAVAATRLHLLPPEEIEEELERARIAIEKTGGEPEREALQLIRRHVRESS- 58 usage_02316.pdb 1 -RAKHAVIEAAVAATRLHLLPPEEIEEELERARIAIEKTGGEPEREALQLIRRHVRESSI 59 usage_02317.pdb 1 -RAKHAVIEAAVAATRLHLLPPEEIEEELERARIAIEKTGGEPEREALQLIRRHVRE--- 56 usage_02318.pdb 1 NRAKHAVIEAAVAATRLHLLPPEEIEEELERARIAIEKTGGEPEREALQLIRRHVRESSI 60 R AVIE A TR P E K GG E EA I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################