################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:30 2021 # Report_file: c_1335_131.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00297.pdb # 2: usage_00631.pdb # 3: usage_01020.pdb # 4: usage_01027.pdb # 5: usage_01028.pdb # 6: usage_01033.pdb # 7: usage_01034.pdb # 8: usage_01035.pdb # 9: usage_01036.pdb # 10: usage_01037.pdb # 11: usage_01038.pdb # 12: usage_01134.pdb # 13: usage_01135.pdb # 14: usage_01136.pdb # 15: usage_01137.pdb # 16: usage_01140.pdb # 17: usage_01327.pdb # 18: usage_01328.pdb # 19: usage_01331.pdb # 20: usage_01334.pdb # # Length: 44 # Identity: 6/ 44 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 44 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 44 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00297.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_00631.pdb 1 EQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENS- 43 usage_01020.pdb 1 ---KGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 40 usage_01027.pdb 1 ---KGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 40 usage_01028.pdb 1 ---KGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 40 usage_01033.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 40 usage_01034.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 40 usage_01035.pdb 1 ---KGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 39 usage_01036.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 40 usage_01037.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 40 usage_01038.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEK- 40 usage_01134.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01135.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01136.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01137.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01140.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01327.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01328.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01331.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 usage_01334.pdb 1 --LKGALLSLIEYYQWDKFAYLYDSDRG-LSTLQAVLDSAAEKK 41 kgalLsliEyYqWdkFaylydsdrG lstlqavldsaaek #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################