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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:30:20 2021
# Report_file: c_0940_69.html
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#====================================
# Aligned_structures: 6
#   1: usage_00231.pdb
#   2: usage_00242.pdb
#   3: usage_00243.pdb
#   4: usage_00259.pdb
#   5: usage_00485.pdb
#   6: usage_01121.pdb
#
# Length:         67
# Identity:        2/ 67 (  3.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     21/ 67 ( 31.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           46/ 67 ( 68.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00231.pdb         1  D-----------LKVTIKPAPET--------KNTMILEICTRYRGDQDATMSILDISMMT   41
usage_00242.pdb         1  D-----------LKVTIKPAP----------KNTMILEICTRYRGDQDATMSILDISMMT   39
usage_00243.pdb         1  D-----------LKVTIKPAP----------KNTMILEICTRYRGDQDATMSILDISMMT   39
usage_00259.pdb         1  D-----------LKVTIKPAP----------KNTMILEICTRYRGDQDATMSILDISMMT   39
usage_00485.pdb         1  -VKAEIVREPGAKETTHRKLI--DTPDGADRFVLTEFEVSP-------------------   38
usage_01121.pdb         1  D-----------LKVTIKPAP----------KNTMILEICTRYRGDQDATMSILDISMMT   39
                                       lkvTikpap          kntmilEict                   

usage_00231.pdb        42  G-FAP--   45
usage_00242.pdb        40  G-FAP--   43
usage_00243.pdb        40  G-FAP--   43
usage_00259.pdb        40  G-FAP--   43
usage_00485.pdb        39  -NGS-TP   43
usage_01121.pdb        40  G-FAP--   43
                             fa   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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