################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:59:06 2021 # Report_file: c_0319_3.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00011.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00029.pdb # 9: usage_00035.pdb # 10: usage_00038.pdb # 11: usage_00041.pdb # 12: usage_00056.pdb # 13: usage_00062.pdb # 14: usage_00063.pdb # 15: usage_00064.pdb # 16: usage_00065.pdb # 17: usage_00066.pdb # 18: usage_00068.pdb # # Length: 153 # Identity: 123/153 ( 80.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/153 ( 80.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/153 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ---NRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 57 usage_00003.pdb 1 --TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 58 usage_00006.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00007.pdb 1 ------VWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 54 usage_00011.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00023.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00024.pdb 1 EATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 60 usage_00029.pdb 1 -ATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 59 usage_00035.pdb 1 --TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 58 usage_00038.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00041.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00056.pdb 1 ---NRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 57 usage_00062.pdb 1 ---NRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 57 usage_00063.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00064.pdb 1 ----RRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 56 usage_00065.pdb 1 --TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 58 usage_00066.pdb 1 --TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 58 usage_00068.pdb 1 -----RVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ 55 VWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQ usage_00002.pdb 58 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 117 usage_00003.pdb 59 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 118 usage_00006.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRK--KSSKLVSANRLFGDKSLTFNETYQDI 114 usage_00007.pdb 55 LMEVFKFDTI----SDQIHFFFAKLNCRLYR-----SKLVSANRLFGDKSLTFNETYQDI 105 usage_00011.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 116 usage_00023.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 116 usage_00024.pdb 61 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 120 usage_00029.pdb 60 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 119 usage_00035.pdb 59 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 118 usage_00038.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 116 usage_00041.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYR-----SKLVSANRLFGDKSLTFNETYQDI 111 usage_00056.pdb 58 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYR---KSSKLVSANRLFGDKSLTFNETYQDI 114 usage_00062.pdb 58 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 117 usage_00063.pdb 57 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 116 usage_00064.pdb 57 LMEVFKFDTISE-TSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 115 usage_00065.pdb 59 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 118 usage_00066.pdb 59 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 118 usage_00068.pdb 56 LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDI 115 LMEVFKFDTI SDQIHFFFAKLNCRLYR SKLVSANRLFGDKSLTFNETYQDI usage_00002.pdb 118 SELVYGAKLQPLDFKENA--------------- 135 usage_00003.pdb 119 SELVYGAKLQPLDFKENA--------------- 136 usage_00006.pdb 115 SELVYGAKLQPLDFKENA--------------- 132 usage_00007.pdb 106 SELVYGAKLQPLDFKENA--------------- 123 usage_00011.pdb 117 SELVYGAKLQPLDFKENAEQSRAAINKWVSNKT 149 usage_00023.pdb 117 SELVYGAKLQPLDFKENA--------------- 134 usage_00024.pdb 121 SELVYGAKLQPLDFKENA--------------- 138 usage_00029.pdb 120 SELVYGAKLQPLDFKENAEQSRAAINKWVSNKT 152 usage_00035.pdb 119 SELVYGAKLQPLDFKENAEQSRAAINKWVSNKT 151 usage_00038.pdb 117 SELVYGAKLQPLDFKENA--------------- 134 usage_00041.pdb 112 SELVYGAKLQPLDFKENA--------------- 129 usage_00056.pdb 115 SELVYGAKLQPLDFKENA--------------- 132 usage_00062.pdb 118 SELVYGAKLQPLDFKENAEQSRAAINKWVSNKT 150 usage_00063.pdb 117 SELVYGAKLQPLDFKENA--------------- 134 usage_00064.pdb 116 SELVYGAKLQPLDFKENA--------------- 133 usage_00065.pdb 119 SELVYGAKLQPLDFKENA--------------- 136 usage_00066.pdb 119 SELVYGAKLQPLDFKENA--------------- 136 usage_00068.pdb 116 SELVYGAKLQPLDFKENA--------------- 133 SELVYGAKLQPLDFKENA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################