################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:48 2021 # Report_file: c_0392_6.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00020.pdb # 2: usage_00036.pdb # 3: usage_00039.pdb # 4: usage_00070.pdb # 5: usage_00205.pdb # # Length: 72 # Identity: 7/ 72 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 72 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 72 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 GSKAPTFATASKISSLLGSSSSDIVLLCQAQAFPVPYTRWYKFIEGTTRKQAVV-LNDRV 59 usage_00036.pdb 1 SSSAPRTPA-LVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVV-LNDRV 58 usage_00039.pdb 1 SSSAPRTPA-LVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVV-LNDRV 58 usage_00070.pdb 1 ---RARIRDR-KAQQVFVDEGHTVQFVCRADGDPPPAILWLSPR---KHLVS-AKSNGRL 52 usage_00205.pdb 1 GSKAPTFATASKISSLLGSSSSDIVLLCQAQAFPVPYTRWYKFIEGTTRKQAVV-LNDRV 59 ap l i llC Aq fP P rWykfi trkqa v lNdRv usage_00020.pdb 60 KQVSGTLIIK-D 70 usage_00036.pdb 59 KQVSGTLIIK-D 69 usage_00039.pdb 59 KQVSGTLIIK-D 69 usage_00070.pdb 53 TVFPDGTLEVRY 64 usage_00205.pdb 60 KQVSGTLIIK-D 70 kqvsgtliik d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################