################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:34 2021 # Report_file: c_0490_18.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00072.pdb # 2: usage_00084.pdb # 3: usage_00107.pdb # 4: usage_00109.pdb # 5: usage_00112.pdb # 6: usage_00114.pdb # 7: usage_00128.pdb # 8: usage_00129.pdb # 9: usage_00130.pdb # 10: usage_00131.pdb # 11: usage_00132.pdb # 12: usage_00133.pdb # 13: usage_00134.pdb # 14: usage_00135.pdb # # Length: 95 # Identity: 18/ 95 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 95 ( 49.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 95 ( 41.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 NVTESENYLRSST--DDFLIRKGSRH-GYCVLVIKFASDVFVHMKIEEHS---------- 47 usage_00084.pdb 1 NGRQAEDYLRSKERGE-FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLAL--G 57 usage_00107.pdb 1 -GRQAEDYLRSKERGE-FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLAL--G 56 usage_00109.pdb 1 -GRQAEDYLRSKERGE-FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLAL--G 56 usage_00112.pdb 1 --RQAEDYLRSKERGE-FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLAL--G 55 usage_00114.pdb 1 --RQAEDYLRSKERGE-FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLAL--G 55 usage_00128.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQEE-KENP-----G 52 usage_00129.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQEE-KE-------G 50 usage_00130.pdb 1 --KQAEDYLRSKERGD-FVIRQSSR-D-HLAITWKLDKDLFQHVDIQEE-KE-----NPG 49 usage_00131.pdb 1 --KQAEDYLRSKERGD-FVIRQSS----HLAITWKLDKDLFQHVDIQEE----------G 43 usage_00132.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQE-----------G 47 usage_00133.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQEE-KE-------G 50 usage_00134.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQEE-KENPLA---G 54 usage_00135.pdb 1 -GKQAEDYLRSKERGD-FVIRQSSRGDDHLAITWKLDKDLFQHVDIQEE-KEN--LA--G 53 qaEdYLRSke FvIRqsS hl itwKldkDlFqH dIqE usage_00072.pdb 48 EHYTCSNKHFEDIDEVIS----------------- 65 usage_00084.pdb 58 KVLIVDNQKYNDLDQIIV-EYLQNKVRLLNEMTSS 91 usage_00107.pdb 57 KVLIVDNQKYNDLDQIIVEYLQNKVRLL-NETSS- 89 usage_00109.pdb 57 KVLIVDNQKYNDLDQIIVEYLQNKVRLL-NEMTSS 90 usage_00112.pdb 56 KVLIVDNQKYNDLDQII------------------ 72 usage_00114.pdb 56 KVLIVDNQKYNDLDQIIVEYLQNKVRLL-NEMTSS 89 usage_00128.pdb 53 KVLVVEGQRYHDLDQIIV-EYLQNKI--------- 77 usage_00129.pdb 51 KVLVVEGQRYHDLDQIIV-EYLQNKIR-------- 76 usage_00130.pdb 50 KVLVVEGQRYHDLDQIIV-EYLQNKIRL-LNE--- 79 usage_00131.pdb 44 KVLVVEGQRYHDLDQIIV-EYLQNKIRL-LNE--- 73 usage_00132.pdb 48 KVLVVEGQRYHDLDQIIV-EYLQNKIRL------- 74 usage_00133.pdb 51 KVLVVEGQRYHDLDQIIV-EYLQNKIRL------- 77 usage_00134.pdb 55 KVLVVEGQRYHDLDQIIV-EYLQNKIRL-L----- 82 usage_00135.pdb 54 KVLVVEGQRYHDLDQIIV-EYLQNKIRL-LN---- 82 kvl v q y DlDqiI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################