################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:14 2021 # Report_file: c_0545_79.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00390.pdb # 2: usage_00392.pdb # 3: usage_00394.pdb # # Length: 139 # Identity: 114/139 ( 82.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/139 ( 82.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/139 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00390.pdb 1 PEVFELYATLFPDS------GPKYSQTKEYLLQVWIFAANYRTKDNDEDAKAAIKEASN- 53 usage_00392.pdb 1 PEVFELYATLFPDSQPELNSGPKYSQTKEYLLQVWIFAANYRTKDNDEDAKAAIKEASNV 60 usage_00394.pdb 1 PEVFELYATLFPDS------GPKYSQTKEYLLQVWIFAANYRTKDNDEDAKAAIKEASNV 54 PEVFELYATLFPDS GPKYSQTKEYLLQVWIFAANYRTKDNDEDAKAAIKEASN usage_00390.pdb 54 -----NLNCNIANGYLSII---PGVALKEFETVLYYDENNLDALVGFAELIF-F-VNDTD 103 usage_00392.pdb 61 ESKFKNLNCNIANGYLSIIKDEPGVALKEFETVLYYDENNLDALVGFAELIFLTFVNDTD 120 usage_00394.pdb 55 ---FKNLNCNIANGYLSI----PGVALKEFETVLYYDENNLDALVGFAELIF-------D 100 NLNCNIANGYLSI PGVALKEFETVLYYDENNLDALVGFAELIF D usage_00390.pdb 104 RSAAYARLKFLLECAIL-- 120 usage_00392.pdb 121 RSAAYARLKFLLECAILE- 138 usage_00394.pdb 101 RSAAYARLKFLLECAILES 119 RSAAYARLKFLLECAIL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################