################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:07:09 2021 # Report_file: c_0587_29.html ################################################################################################ #==================================== # Aligned_structures: 51 # 1: usage_00003.pdb # 2: usage_00008.pdb # 3: usage_00044.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00066.pdb # 7: usage_00078.pdb # 8: usage_00079.pdb # 9: usage_00090.pdb # 10: usage_00091.pdb # 11: usage_00093.pdb # 12: usage_00097.pdb # 13: usage_00098.pdb # 14: usage_00110.pdb # 15: usage_00111.pdb # 16: usage_00112.pdb # 17: usage_00113.pdb # 18: usage_00127.pdb # 19: usage_00128.pdb # 20: usage_00129.pdb # 21: usage_00130.pdb # 22: usage_00131.pdb # 23: usage_00132.pdb # 24: usage_00133.pdb # 25: usage_00138.pdb # 26: usage_00139.pdb # 27: usage_00140.pdb # 28: usage_00146.pdb # 29: usage_00151.pdb # 30: usage_00152.pdb # 31: usage_00155.pdb # 32: usage_00201.pdb # 33: usage_00205.pdb # 34: usage_00206.pdb # 35: usage_00207.pdb # 36: usage_00208.pdb # 37: usage_00211.pdb # 38: usage_00212.pdb # 39: usage_00213.pdb # 40: usage_00226.pdb # 41: usage_00227.pdb # 42: usage_00260.pdb # 43: usage_00261.pdb # 44: usage_00291.pdb # 45: usage_00319.pdb # 46: usage_00320.pdb # 47: usage_00322.pdb # 48: usage_00336.pdb # 49: usage_00357.pdb # 50: usage_00358.pdb # 51: usage_00359.pdb # # Length: 109 # Identity: 13/109 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/109 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/109 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00008.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00044.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00064.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00065.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00066.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00078.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00079.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00090.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00091.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00093.pdb 1 --SLYAVKVLDSTGSGQYSWIINGIEWAISN------N-----MDVINMSLGGPTGSTAL 47 usage_00097.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00098.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00110.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00111.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00112.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00113.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00127.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00128.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00129.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00130.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00131.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00132.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00133.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00138.pdb 1 -VSIVGCKFLAADGTGSTSGAIKCIDYMVGL------KNAGVNLRVLNNSWGGGGFSQAL 53 usage_00139.pdb 1 --SLYAVKVLDSTGSGQYSWIINGIEWAISN------N-----MDVINMSLGGPTGSTAL 47 usage_00140.pdb 1 --SLYAVKVLDSTGSGQYSWIINGIEWAISN------N-----MDVINMSLGGPTGSTAL 47 usage_00146.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00151.pdb 1 KADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQ-----MRIITMSLGGPTDSEEL 55 usage_00152.pdb 1 -------------GSGQYSWIINGIEWAISN------N-----MDVINMSLGGPTGSTAL 36 usage_00155.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00201.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00205.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00206.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00207.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00208.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00211.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00212.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00213.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00226.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00227.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00260.pdb 1 --SLYAVKVLGADGSGQASWIINGIEWAIAN------N-----MDVINMSLGSPSGSAAL 47 usage_00261.pdb 1 --SLYAVKVLGADGSGQASWIINGIEWAIAN------N-----MDVINMSLGSPSGSAAL 47 usage_00291.pdb 1 --SLYAVKVLDSTGSGQYSWIINGIEWAISN------N-----MDVINMSLGGPTGSTAL 47 usage_00319.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00320.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00322.pdb 1 --SLYAVKVLGADGSGQASWIINGIEWAIAN------N-----MDVINMSLGSPSGSAAL 47 usage_00336.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00357.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00358.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 usage_00359.pdb 1 --SLYAVKVLGADGSGQYSWIINGIEWAIAN------N-----MDVINMSLGGPSGSAAL 47 GsG swii I a m vinmSlG p S aL usage_00003.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00008.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00044.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVGAVD 93 usage_00064.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00065.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00066.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00078.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00079.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVGAVD 93 usage_00090.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00091.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00093.pdb 48 KTVVDKAVSSGIVVAAAAGNEGS-SGSTSTVGYPAKYPS--TIAVG--- 90 usage_00097.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00098.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00110.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00111.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00112.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVGAVD 93 usage_00113.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00127.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00128.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00129.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00130.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00131.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00132.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00133.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00138.pdb 54 ADAITASEQADILFVAAAGNDAVDNDQ--NPHYPSNYENDNVLSI-A-- 97 usage_00139.pdb 48 KTVVDKAVSSGIVVAAAAGNEGS-SGSTSTVGYPAKYPS--TIAVG--- 90 usage_00140.pdb 48 KTVVDKAVSSGIVVAAAAGNEGS-SGSTSTVGYPAKYPS--TIAVG--- 90 usage_00146.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00151.pdb 56 HDAVKYAVSNNVSVVCAAG-N--------EFAYPAAYNE--VIAVGA-- 91 usage_00152.pdb 37 KTVVDKAVSSGIVVAAAAGNEGS-SGSTSTVGYPAKYPS--TIAVG--- 79 usage_00155.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00201.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00205.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00206.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00207.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00208.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00211.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00212.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00213.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00226.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00227.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00260.pdb 48 KAAVDKAVASGVVVVAAAGNSGT-SGSSSTVSYPAKYPS--VIAVG--- 90 usage_00261.pdb 48 KAAVDKAVASGVVVVAAAGNSGT-SGSSSTVSYPAKYPS--VIAVG--- 90 usage_00291.pdb 48 KTVVDKAVSSGIVVAAAAGNEGS-SGSTSTVGYPAKYPS--TIAVG--- 90 usage_00319.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00320.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 usage_00322.pdb 48 KAAVDKAVASGVVVVAAAGNSGT-SGSSSTVSYPAKYPS--VIAVG--- 90 usage_00336.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVGAVD 93 usage_00357.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00358.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPGKYPS--VIAVG--- 90 usage_00359.pdb 48 KAAVDKAVASGVVVVAAAGNEGT-SGSSSTVGYPAKYPS--VIAVG--- 90 v av v aAAG YP Y iav #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################