################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:42 2021 # Report_file: c_1163_34.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00144.pdb # 2: usage_00418.pdb # 3: usage_00419.pdb # 4: usage_00420.pdb # 5: usage_00452.pdb # 6: usage_01024.pdb # 7: usage_01089.pdb # # Length: 46 # Identity: 1/ 46 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 46 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 46 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 -SIQVEYM----------------PHIF-PEGSEP--KVYLLYRP- 25 usage_00418.pdb 1 -SIQVEYMD---------------PHIF-PEGSEP--KVYLLYRP- 26 usage_00419.pdb 1 -SIQVEYMD--------------NPHIF-PEGSEP--KVYLLYRP- 27 usage_00420.pdb 1 VSIQVEYMD-------G----TTNPHIF-PEGSEP--KVYLLYRP- 31 usage_00452.pdb 1 --KFSIDK-EMAETQHG---TTVVKVKYEGA-GAP--CKVPIEIRD 37 usage_01024.pdb 1 VSIQVEYMD----GE-G---GTTNPHIF-PEGSEP--KVYLLYRP- 34 usage_01089.pdb 1 ITIIIWIVD--------DSGTIISANRY-GEG-RPSQAYNLCMVG- 35 i e P l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################