################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:16 2021 # Report_file: c_0985_39.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00029.pdb # 2: usage_00081.pdb # 3: usage_00211.pdb # 4: usage_00248.pdb # 5: usage_00350.pdb # 6: usage_00382.pdb # 7: usage_00383.pdb # 8: usage_00528.pdb # 9: usage_00595.pdb # 10: usage_00692.pdb # 11: usage_00710.pdb # 12: usage_00903.pdb # # Length: 61 # Identity: 11/ 61 ( 18.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 61 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 61 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 YETQWYV--K-HGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIG 57 usage_00081.pdb 1 MFCQFYVHIPSRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVM- 59 usage_00211.pdb 1 AFFQFYV--A-DGKLSCQLYQRC-DVFLGLPFNIASYALLVHMMAQQDLEVGD-FVWTG- 54 usage_00248.pdb 1 LSQYYVT--N-DNCLSCNLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFI- 56 usage_00350.pdb 1 LLCQFYVN-D-QKELSCIMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMG 58 usage_00382.pdb 1 LLAQFYV--S-NGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLG 57 usage_00383.pdb 1 -LAQFYV--S-NGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLG 56 usage_00528.pdb 1 TLYQFYV--N-DGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECGLEVGEFIHTF- 56 usage_00595.pdb 1 -MCQFYV--D-NGELSCQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTL- 55 usage_00692.pdb 1 -LCQFYV--V-NSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLG 56 usage_00710.pdb 1 -LCQFYV--V-NGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLG 56 usage_00903.pdb 1 AFFQFYV--A-DGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGD------ 51 q yv Ls yqRs D LG PFN asY L A usage_00029.pdb 58 D 58 usage_00081.pdb - usage_00211.pdb - usage_00248.pdb - usage_00350.pdb 59 N 59 usage_00382.pdb 58 D 58 usage_00383.pdb 57 D 57 usage_00528.pdb - usage_00595.pdb - usage_00692.pdb 57 D 57 usage_00710.pdb 57 D 57 usage_00903.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################