################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:53 2021 # Report_file: c_0958_27.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00506.pdb # 2: usage_00611.pdb # 3: usage_00612.pdb # 4: usage_00857.pdb # 5: usage_01108.pdb # 6: usage_01109.pdb # 7: usage_01110.pdb # 8: usage_01111.pdb # 9: usage_01112.pdb # 10: usage_01519.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 68 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 68 ( 60.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00506.pdb 1 V-NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 40 usage_00611.pdb 1 --HITLDPDTANP-WLILSED-----------------RRQVRLGDTQQSI-PGNEERFD 39 usage_00612.pdb 1 --HITLDPDTANP-WLILSED-----------------RRQVRLGDTQQSI-PGNEERFD 39 usage_00857.pdb 1 -V-------TPIPGDVCYFTFTSNDLKTPSHGYEVQTI-VDLAVFY--------GRNNLL 43 usage_01108.pdb 1 --NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 39 usage_01109.pdb 1 --NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 39 usage_01110.pdb 1 --NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 39 usage_01111.pdb 1 --NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 39 usage_01112.pdb 1 --NVILDAETAYP-NLIFSDD-----------------LKSVRLGNKWERL-PDGPQRFD 39 usage_01519.pdb 1 --ELTFDPSSAHP-SLVVSSS-----------------GRRVECSEQKAPPAGEDPRQFD 40 ta P l s v fd usage_00506.pdb 41 SCIIVLGS 48 usage_00611.pdb 40 SYPMVLGA 47 usage_00612.pdb 40 SYPMVLGA 47 usage_00857.pdb 44 ---LNG-- 46 usage_01108.pdb 40 SCIIVLGS 47 usage_01109.pdb 40 SCIIVLGS 47 usage_01110.pdb 40 SCIIVLGS 47 usage_01111.pdb 40 SCIIVLGS 47 usage_01112.pdb 40 SCIIVLGS 47 usage_01519.pdb 41 KAVAVVA- 47 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################