################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:06 2021 # Report_file: c_1155_61.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00089.pdb # 2: usage_00197.pdb # 3: usage_00198.pdb # 4: usage_00488.pdb # 5: usage_00489.pdb # 6: usage_00550.pdb # 7: usage_00618.pdb # 8: usage_00634.pdb # 9: usage_00673.pdb # 10: usage_00707.pdb # 11: usage_00719.pdb # 12: usage_00789.pdb # 13: usage_00835.pdb # 14: usage_00836.pdb # 15: usage_00902.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 43 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 43 ( 62.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 NEMAVFLCASGS--LLD--V-REVFFGKGTR------LTV--- 29 usage_00197.pdb 1 ---GDYYCKSLT--S----T-RRRVFGTGTK------LTV--- 24 usage_00198.pdb 1 ---GDYYCKSLT--S----T-RRRVFGTGTK------LTV--- 24 usage_00488.pdb 1 -----IGYCSNTCSK----T-QIWATSH---GCKMYCCL---P 27 usage_00489.pdb 1 ---ADYYCASAT--L----L-DTYVFGTGTK------VTV--- 24 usage_00550.pdb 1 ---ATYLCAFIT-------G-NQFYFGTGTS------LTV--- 23 usage_00618.pdb 1 ---GDYFCSSLT--D----R-SHRIFGGGTK------VTV--- 24 usage_00634.pdb 1 ---GDYYCKSLT--S----T-RRRVFGTGTK------LTVLG- 26 usage_00673.pdb 1 ---ADYYCSSYT--S----S-STWVFGGGTK------LTV--- 24 usage_00707.pdb 1 -----YYCSSHT--S----R-GTWVFGGGTK------LTV--- 22 usage_00719.pdb 1 ---GDYFCSSLT--D----R-SHRIFGGGTK------VT---- 23 usage_00789.pdb 1 ------FCASSV--A-VSAGTYEQYFGPGTR------LTVTE- 27 usage_00835.pdb 1 ---GDYYCKSLT--S----T-RRRVFGTGTK------LT---- 23 usage_00836.pdb 1 ---GDYYCKSLT--S----T-RRRVFGTGTK------LT---- 23 usage_00902.pdb 1 ---ADYYCSSYE--G----S-DNFVFGTGTK------VTV--- 24 c s fg t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################