################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:55 2021 # Report_file: c_1242_52.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00079.pdb # 2: usage_00259.pdb # 3: usage_00282.pdb # 4: usage_00418.pdb # 5: usage_00689.pdb # 6: usage_00717.pdb # 7: usage_01678.pdb # 8: usage_01701.pdb # 9: usage_02148.pdb # 10: usage_02425.pdb # # Length: 30 # Identity: 4/ 30 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 30 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 30 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_00259.pdb 1 SEQISTA--GKEASGTSNMKFMMNGALTLG 28 usage_00282.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_00418.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_00689.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_00717.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_01678.pdb 1 VTVAAVDFS-----GTAETKIDQVGEAVS- 24 usage_01701.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_02148.pdb 1 SEQISTA--GTEASGTGNMKFMLNGALTIG 28 usage_02425.pdb 1 SQHISTA--GMEASGTSNMKFALNGCLIIG 28 s ista GT nmKf nG l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################