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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:19:05 2021
# Report_file: c_1417_21.html
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#====================================
# Aligned_structures: 5
#   1: usage_00879.pdb
#   2: usage_00881.pdb
#   3: usage_00883.pdb
#   4: usage_00885.pdb
#   5: usage_00919.pdb
#
# Length:         53
# Identity:        5/ 53 (  9.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     28/ 53 ( 52.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/ 53 ( 47.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00879.pdb         1  TNEQLFSAGLERALSVETVRAAFTGAPPGPWHE-----------KLRRRFASL   42
usage_00881.pdb         1  TNEQLFSAGLERALSVETVRAAFTGAPPGPWHE-----------KLRRRFASL   42
usage_00883.pdb         1  TNEQLFSAGLERALSVETVRAAFTGAPPGPWHE-----------KLRRRFAS-   41
usage_00885.pdb         1  TNEQLFSAGLERALSVETVRAAFTGAPPGPWHE-----------KLRRRFASL   42
usage_00919.pdb         1  ------------TIGVLSSLARAFGHEAYEMI-IPVGAPGIIDYDHRMYAAL-   39
                                       alsVetvrAaftGappgpwh            klRrrfAs 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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