################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:09 2021 # Report_file: c_1089_123.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00062.pdb # 2: usage_00143.pdb # 3: usage_00185.pdb # 4: usage_00187.pdb # 5: usage_00189.pdb # 6: usage_00354.pdb # 7: usage_01034.pdb # 8: usage_01210.pdb # 9: usage_01312.pdb # 10: usage_01313.pdb # # Length: 67 # Identity: 12/ 67 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 67 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 67 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 HSAEIEQLTKI-EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLR 59 usage_00143.pdb 1 --AEIEQLTKI-EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLR 57 usage_00185.pdb 1 HSAEIEQLTK--EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDATVKLRVN 58 usage_00187.pdb 1 HSAEIEQLTK--EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDATVKLRVN 58 usage_00189.pdb 1 HSAEIEQLTKI-EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLR 59 usage_00354.pdb 1 PKAELEKLLTMK-PGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAGTKTVDFV 59 usage_01034.pdb 1 HSAEIEQLTKI-EPGELYNGTKVTK-EDDIKKLLGRYGYAYPRVQS-PEINDADKTVKLR 57 usage_01210.pdb 1 --AEIEQLTKI-EPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLR 57 usage_01312.pdb 1 -SAEIEQLTKI-EPGELYNGTKVTK-EDDIKKLLGRYGYAYPRVQS-PEINDADKTVKLR 56 usage_01313.pdb 1 -SAEIEQLTK-----ELYNGTKVTK-EDDIKKLLGRYGYAYPRVQS-----------KLR 42 AEiEqLtk elYngtkvTk eddIkkllGryGYAYprvqs usage_00062.pdb 60 VNVDA-- 64 usage_00143.pdb 58 VNVDAG- 63 usage_00185.pdb 59 VDAG--- 62 usage_00187.pdb 59 VDA---- 61 usage_00189.pdb 60 VNVD--- 63 usage_00354.pdb 60 L------ 60 usage_01034.pdb 58 VNVDAG- 63 usage_01210.pdb 58 VNVDAGN 64 usage_01312.pdb 57 VNVDAG- 62 usage_01313.pdb 43 VNVDAGN 49 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################