################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:14 2021 # Report_file: c_0413_12.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00023.pdb # 2: usage_00026.pdb # 3: usage_00027.pdb # 4: usage_00121.pdb # 5: usage_00122.pdb # 6: usage_00144.pdb # 7: usage_00198.pdb # 8: usage_00203.pdb # # Length: 64 # Identity: 11/ 64 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 64 ( 17.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 64 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -SITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGH 59 usage_00026.pdb 1 -QMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEG-- 57 usage_00027.pdb 1 -QMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEG-- 57 usage_00121.pdb 1 -SVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 59 usage_00122.pdb 1 -SVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 59 usage_00144.pdb 1 -SITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGH 59 usage_00198.pdb 1 -SVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 59 usage_00203.pdb 1 GSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 60 L FS G V G G GKS L usage_00023.pdb 60 VAIK 63 usage_00026.pdb ---- usage_00027.pdb ---- usage_00121.pdb 60 VEV- 62 usage_00122.pdb 60 VEV- 62 usage_00144.pdb 60 VAIK 63 usage_00198.pdb 60 VEV- 62 usage_00203.pdb 61 VEV- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################