################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:43 2021 # Report_file: c_0514_97.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00326.pdb # 2: usage_00373.pdb # 3: usage_00374.pdb # 4: usage_00663.pdb # # Length: 120 # Identity: 9/120 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/120 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/120 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00326.pdb 1 A------------RGAQVTDIVILVVAADDGVMPQTVEAINHAKAANVPIIVAINKMDKP 48 usage_00373.pdb 1 -GHADLIRAVVSAADII--DLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNA 57 usage_00374.pdb 1 ---ADLIRAVVSAADII--DLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNA 55 usage_00663.pdb 1 ---AQIRQQAEIAMDEA--DVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKL--- 52 d D vV a eG qt E il n Piiv i K usage_00326.pdb 49 -EA-NPDRVMQELMEYNLVPEEWG------GDTIFCKLSAKTKEGLDHLLEMILLVSEME 100 usage_00373.pdb 58 GT-EEIKRTEMIMKSIL-------QSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNNA 109 usage_00374.pdb 56 GT-EEIKRTEMIMKSIL-------QSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNN- 106 usage_00663.pdb 53 ----------YDFYSLGF--------------GEPYPISGTHGLGLGDLLDAV------- 81 s piSaktg G d L i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################