################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:04 2021 # Report_file: c_1164_78.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00380.pdb # 2: usage_00845.pdb # 3: usage_00846.pdb # 4: usage_01097.pdb # 5: usage_01098.pdb # 6: usage_01099.pdb # 7: usage_01100.pdb # 8: usage_01101.pdb # 9: usage_01103.pdb # 10: usage_01104.pdb # 11: usage_01748.pdb # 12: usage_01890.pdb # 13: usage_01968.pdb # # Length: 82 # Identity: 30/ 82 ( 36.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 82 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 82 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00380.pdb 1 ----------------------------------------TMAWAVPK--NKTATNPLTV 18 usage_00845.pdb 1 -----------------------------------------MAWAVPKDNNKTATNPLTV 19 usage_00846.pdb 1 -----------------------------------------MAWAVPKDNNKTATNPLTV 19 usage_01097.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01098.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01099.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01100.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01101.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01103.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01104.pdb 1 -----------------------------------------MAWVIPKDNNKIAINPVTV 19 usage_01748.pdb 1 -----------------------------------------MAWAVPKDNNKNATNPLTV 19 usage_01890.pdb 1 ENIRLSARNVTNAETAPGGPYIVGTSGSCPNVTNGNGFFATMAWAVPK--NKTATNPLTV 58 usage_01968.pdb 1 -----------------------------------------MAWAVPKDNNKTATNPLTV 19 MAW PK NK A NP TV usage_00380.pdb 19 EVPYICTKGEDQITVWGFHSDD 40 usage_00845.pdb 20 EVPHICTKEEDQITVWGFHSDD 41 usage_00846.pdb 20 EVPHICTKEEDQITVWGFHSDD 41 usage_01097.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01098.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01099.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01100.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01101.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01103.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01104.pdb 20 EVPYICSEGEDQITVWGFHSDD 41 usage_01748.pdb 20 EVPYICTEGEDQITVWGFHSDD 41 usage_01890.pdb 59 EVPYICTKGEDQITVWGFHSDD 80 usage_01968.pdb 20 EVPHICTKEEDQITVWGFHSDD 41 EVP IC EDQITVWGFHSDD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################