################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:33 2021 # Report_file: c_0618_20.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00049.pdb # 2: usage_00056.pdb # 3: usage_00118.pdb # 4: usage_00130.pdb # 5: usage_00182.pdb # 6: usage_00205.pdb # 7: usage_00206.pdb # 8: usage_00207.pdb # 9: usage_00208.pdb # 10: usage_00222.pdb # 11: usage_00228.pdb # 12: usage_00234.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 68 ( 5.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 68 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 NGRRLQILDLLAQG-ERAVEAIATATG-NLTTASANLQALKSGGLVEARREG-----TRQ 53 usage_00056.pdb 1 -ERRLQIL-MLLDN-ELSVGELSSRLELSQSALSQHLAWLRRDGLVNTRKEA-----QTV 52 usage_00118.pdb 1 -YNRIRIMELLSVS-EASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQG-----QSM 53 usage_00130.pdb 1 -ERRLQIL-CLHNQ-ELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRKEA-----QTV 52 usage_00182.pdb 1 HPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDA-----QRI 55 usage_00205.pdb 1 -PVRLMLVCTLVEG-EFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNI-----KQI 53 usage_00206.pdb 1 -PVRLMLVCTLVEG-EFSVGELEQQIGI------QQLGVLRESGIVETRRNI-----KQI 47 usage_00207.pdb 1 -PVRLMLVCTLVEG-EFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNI-----KQI 53 usage_00208.pdb 1 -HPVRLLVCTLVEG-EFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNI-----KQI 53 usage_00222.pdb 1 --PRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQKG-----EEI 53 usage_00228.pdb 1 EWWSIL-IRDALQG-LRRFDEFSRSLDIAPN-LTRRLNALVEAGLLERQPYS-----Y-- 50 usage_00234.pdb 1 -ETRRRILFLLTKR-PYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRK 58 l l l g usage_00049.pdb 54 YYRI---- 57 usage_00056.pdb 53 FYTL---- 56 usage_00118.pdb 54 IYSL---- 57 usage_00130.pdb 53 YYTL---- 56 usage_00182.pdb 56 LYSI---- 59 usage_00205.pdb 54 FYRL---- 57 usage_00206.pdb 48 FYRL---- 51 usage_00207.pdb 54 FYRL---- 57 usage_00208.pdb 54 FYRL---- 57 usage_00222.pdb 54 YYKL---- 57 usage_00228.pdb 51 ----QYVP 54 usage_00234.pdb 59 YYMI---- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################