################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:18 2021 # Report_file: c_0055_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00076.pdb # 4: usage_00092.pdb # 5: usage_00093.pdb # 6: usage_00172.pdb # 7: usage_00173.pdb # 8: usage_00281.pdb # 9: usage_00282.pdb # 10: usage_00283.pdb # 11: usage_00284.pdb # # Length: 224 # Identity: 136/224 ( 60.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 136/224 ( 60.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/224 ( 2.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00008.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00076.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00092.pdb 1 -APVQEWARRQEEGGARALDLNVG----DKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 55 usage_00093.pdb 1 PAPVQEWARRQEEGGARALDLNVG----DKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 56 usage_00172.pdb 1 -RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIE 59 usage_00173.pdb 1 -RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIE 59 usage_00281.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00282.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00283.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 usage_00284.pdb 1 -APVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIE 59 P QEWARRQ E GA LD N G D V MEWLV QEV L CLDSTN AIE usage_00007.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00008.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00076.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00092.pdb 56 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 115 usage_00093.pdb 57 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 116 usage_00172.pdb 60 AGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMEL 119 usage_00173.pdb 60 AGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMEL 119 usage_00281.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00282.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00283.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 usage_00284.pdb 60 AGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMEL 119 AGLK AMINST A K FP A AA IGLTMN G PKD R AMEL usage_00007.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSAVSQN 179 usage_00008.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSAVSQN 179 usage_00076.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 179 usage_00092.pdb 116 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 175 usage_00093.pdb 117 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 176 usage_00172.pdb 120 VANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQK 179 usage_00173.pdb 120 VANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQK 179 usage_00281.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 179 usage_00282.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 179 usage_00283.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 179 usage_00284.pdb 120 VAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN 179 VA AD G PM LYIDPLILP NVAQ HA EVL T QIK A PAP TVLGLS VSQ usage_00007.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00008.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00076.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00092.pdb 176 CQNRPLINRTFLAMAMACGLMSAIADACDEALIETAATAEILLN 219 usage_00093.pdb 177 CQNRPLINRTFLAMAMACGLMSAIADACDEALIETAATAEILLN 220 usage_00172.pdb 180 CPDRPLINRTYLVMAMTAGLDAAIMDVDDDALVDAAATAHILLN 223 usage_00173.pdb 180 CPDRPLINRTYLVMAMTAGLDAAIMDVDDDALVDAAATAHILL- 222 usage_00281.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00282.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00283.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 usage_00284.pdb 180 CQNRPLINRTFLAMAMACGLDAAIADACDEALIETAATAEILLN 223 C RPLINRT L MAM GL AI D D AL AATA ILL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################