################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:22 2021 # Report_file: c_1262_217.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00505.pdb # 3: usage_00960.pdb # 4: usage_01087.pdb # 5: usage_01784.pdb # 6: usage_01819.pdb # 7: usage_02009.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 53 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 53 ( 73.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --GITHIGP-ARQQDGD-Y-SYL-----ADILQTVL-P----DVAW---HN-- 33 usage_00505.pdb 1 --ENIVYIGSSFH----NN-ALL-----RKVVEDYT-VLRGCK-----PYYV- 34 usage_00960.pdb 1 KTPKFKLPIQ--------K-ETW-----ETWWTEYWQ----ATWIP-EWEFV- 33 usage_01087.pdb 1 --EAILIVY--------------DITNEESFQNIHR-KYYPLIN---NKFSDV 33 usage_01784.pdb 1 ---GVILFA-RHF----QN-RAQ-----LTALTDSI-RAVREDILI---AV-- 33 usage_01819.pdb 1 ---GVILFA-RHF----QN-RAQ-----LTALTDSI-RAVREDILI---AV-- 33 usage_02009.pdb 1 --RLAVVTI--KK----QYAGHA-----KRV---GV-WSFLRQFYTKFVIVC- 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################