################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:26 2021 # Report_file: c_0778_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00126.pdb # 2: usage_00509.pdb # 3: usage_00510.pdb # 4: usage_00511.pdb # 5: usage_00512.pdb # 6: usage_00578.pdb # 7: usage_00647.pdb # 8: usage_00815.pdb # 9: usage_00816.pdb # 10: usage_00817.pdb # 11: usage_00818.pdb # # Length: 85 # Identity: 21/ 85 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 85 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 85 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00126.pdb 1 APMTRCRALNG----VPNAALAEYYAQRTTPG-G--FLISEGTMVSPGSAGFPHVPGIYS 53 usage_00509.pdb 1 APLTRCQATE-DDHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00510.pdb 1 APLTRCQATE-DDHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00511.pdb 1 APLTRCQATE-DDHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00512.pdb 1 APLTRCQATE-DDHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00578.pdb 1 PPLTRMRALH-PGNIPNRDWAVEYYTQRAQ--RPGTMIITEGAFISPQAGGYDNAPGVWS 57 usage_00647.pdb 1 APLTRCQATE-DGHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00815.pdb 1 APLTRCQATE-DGHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00816.pdb 1 APLTRCQATE-DGHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00817.pdb 1 APLTRCQATE-DGHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 usage_00818.pdb 1 APLTRCQATE-DGHVPRTESMLKYYEDRAS--AG--LIIAEATMVQPNYTGFLTEPGIYS 55 aPlTRc A p YY Ra g iI E tmv P Gf PGiyS usage_00126.pdb 54 DEQVEAWKQVVEAVHAKGGFIFCQL 78 usage_00509.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00510.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00511.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00512.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00578.pdb 58 EEQMVEWTKIFNAIHEKKSFVWVQL 82 usage_00647.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00815.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00816.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00817.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 usage_00818.pdb 56 DAQIEEWRKIVDAVHKKGGLIFLQL 80 d Q eeW kiv AvH Kgg if QL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################