################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:09 2021 # Report_file: c_1405_30.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00217.pdb # 2: usage_00563.pdb # 3: usage_00596.pdb # 4: usage_00597.pdb # 5: usage_00681.pdb # 6: usage_01672.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 42 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 42 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 NAFMVWAKDERKRLAQQNP-DL----HNAVLSKMLGKAWKEL 37 usage_00563.pdb 1 SAYMLWLNSARESIKRENP-GI----KVTEVAKRGGELWRA- 36 usage_00596.pdb 1 --FFLFCSEYRPKIKGEHP-GL----SIGDVAKKLGEMWN-- 33 usage_00597.pdb 1 --FFLFCSEYRPKIKGEHP-GL----SIGDVAKKLGEMWNN- 34 usage_00681.pdb 1 ------QQAWFTHITPYMTIFLHEKKAKDILDEFRKRAVDNI 36 usage_01672.pdb 1 SAFFLFCSEYRPKIKGEHP-GL----SIGDVAKKLGEMWNNT 37 r i p l k g w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################