################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:32 2021 # Report_file: c_1219_129.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00123.pdb # 4: usage_00586.pdb # 5: usage_00587.pdb # 6: usage_00588.pdb # 7: usage_01063.pdb # 8: usage_01084.pdb # 9: usage_01085.pdb # 10: usage_01097.pdb # 11: usage_01098.pdb # 12: usage_01116.pdb # 13: usage_01117.pdb # 14: usage_01118.pdb # 15: usage_01119.pdb # 16: usage_01120.pdb # 17: usage_01121.pdb # 18: usage_01261.pdb # 19: usage_01284.pdb # 20: usage_01320.pdb # 21: usage_01321.pdb # 22: usage_02051.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 51 ( 37.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 51 ( 60.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDQ----------PDD 31 usage_00047.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDQ----------PDD 31 usage_00123.pdb 1 GVTP-------VMQTIVVKN-VPTTIGDTVYITGNRAELGSWDTKQYP--- 40 usage_00586.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_00587.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_00588.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01063.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01084.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01085.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01097.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01098.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01116.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01117.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01118.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01119.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01120.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01121.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01261.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01284.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01320.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_01321.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 usage_02051.pdb 1 ----GITDEVTE-GQFMYVTGGRL-----TYSNWKKDE----------PND 31 e gqfmyvt grl tYsnwkkd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################