################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:26 2021 # Report_file: c_1115_24.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00370.pdb # 2: usage_00371.pdb # 3: usage_00378.pdb # 4: usage_00379.pdb # 5: usage_00380.pdb # 6: usage_00381.pdb # 7: usage_00382.pdb # 8: usage_00383.pdb # 9: usage_00446.pdb # 10: usage_00447.pdb # 11: usage_01074.pdb # 12: usage_01531.pdb # 13: usage_01532.pdb # # Length: 59 # Identity: 46/ 59 ( 78.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 59 ( 79.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 59 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00370.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSL 59 usage_00371.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKME---REEVEAQLAV-----TVVDAITTTLSL 51 usage_00378.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSL 59 usage_00379.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKME--PREEVEAQLAVLGLEPTVVDAITTTLSL 57 usage_00380.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKM----REEVEAQLAVLGLEPTVVDAITTTLS- 54 usage_00381.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKM----EEEVEAQLAVLGLEPTVVDAITTTLS- 54 usage_00382.pdb 1 -KVLQTVVEQAGVTSDKFAPVCVIVDKMI--PREEVEAQLAVLGLEPTVVDAITTTLSL 56 usage_00383.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSL 59 usage_00446.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSL 59 usage_00447.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLS- 58 usage_01074.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLS- 58 usage_01531.pdb 1 RKVLQTVVEQAG-TSDKFAPVCVIVDKME---REEVEAQLAVLGL--TVVDAITTTLSL 53 usage_01532.pdb 1 RKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSL 59 KVLQTVVEQAG TSDKFAPVCVIVDKM rEEVEAQLAV TVVDAITTTLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################