################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:20:57 2021 # Report_file: c_0442_6.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00018.pdb # 4: usage_00020.pdb # 5: usage_00022.pdb # 6: usage_00024.pdb # 7: usage_00027.pdb # 8: usage_00029.pdb # 9: usage_00031.pdb # 10: usage_00033.pdb # 11: usage_00035.pdb # 12: usage_00038.pdb # 13: usage_00040.pdb # 14: usage_00042.pdb # 15: usage_00045.pdb # 16: usage_00047.pdb # 17: usage_00049.pdb # 18: usage_00051.pdb # 19: usage_00053.pdb # 20: usage_00055.pdb # 21: usage_00065.pdb # 22: usage_00067.pdb # 23: usage_00074.pdb # 24: usage_00076.pdb # 25: usage_00078.pdb # 26: usage_00080.pdb # 27: usage_00109.pdb # 28: usage_00113.pdb # 29: usage_00115.pdb # 30: usage_00134.pdb # 31: usage_00136.pdb # 32: usage_00140.pdb # 33: usage_00143.pdb # 34: usage_00145.pdb # 35: usage_00147.pdb # 36: usage_00151.pdb # 37: usage_00164.pdb # 38: usage_00166.pdb # 39: usage_00168.pdb # # Length: 84 # Identity: 54/ 84 ( 64.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 84 ( 64.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 84 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 IPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 60 usage_00004.pdb 1 IPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 60 usage_00018.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00020.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00022.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00024.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00027.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00029.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00031.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00033.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00035.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00038.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00040.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00042.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00045.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00047.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00049.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00051.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00053.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00055.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00065.pdb 1 ----QNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVV 56 usage_00067.pdb 1 VPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVV 60 usage_00074.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00076.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00078.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00080.pdb 1 ----QNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 56 usage_00109.pdb 1 ----QNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVV 56 usage_00113.pdb 1 ----QNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 56 usage_00115.pdb 1 ----QNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 56 usage_00134.pdb 1 IPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 60 usage_00136.pdb 1 IPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 60 usage_00140.pdb 1 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 60 usage_00143.pdb 1 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 60 usage_00145.pdb 1 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 60 usage_00147.pdb 1 ----QNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVI-RIREPKTTALIFASGK-VI 54 usage_00151.pdb 1 ----QNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVV 56 usage_00164.pdb 1 ----QNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 56 usage_00166.pdb 1 ----QNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVI 56 usage_00168.pdb 1 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 60 QN V TV L C LDLK AL ARNAEYNPKRFAAVI RIREP TTALIF SGK V usage_00002.pdb 61 TGAKSEKSSRMAAQRYAKIIHKL- 83 usage_00004.pdb 61 TGAKSEKSSRMAAQRYAKIIHKL- 83 usage_00018.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00020.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00022.pdb 57 TGAKSEDFSKMAARKYARIVQKLG 80 usage_00024.pdb 57 TGAKSEDFSKMAARKYARIVQKLG 80 usage_00027.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00029.pdb 57 TGAKSEDFSKMAARKYARIVQKLG 80 usage_00031.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00033.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00035.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00038.pdb 57 TGAKSEDFSKMAARKYARIVQK-- 78 usage_00040.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00042.pdb 57 TGAKSEDFSKMAARKYARIVQKLG 80 usage_00045.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00047.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00049.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00051.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00053.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00055.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00065.pdb 57 TGAKSEDDSKLASRKYARIIQKIG 80 usage_00067.pdb 61 TGAKSEDDSKLASRKYARIIQKIG 84 usage_00074.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00076.pdb 57 TGAKSEDFSKMAARKYARIVQK-- 78 usage_00078.pdb 57 TGAKSEDFSKMAARKYARIVQKL- 79 usage_00080.pdb 57 TGAKSEDFSKMAARKYARIVQKLG 80 usage_00109.pdb 57 TGAKSEDDSKLASRKYARIIQKIG 80 usage_00113.pdb 57 TGAKSEEQSRLAARKYARVVQKL- 79 usage_00115.pdb 57 TGAKSEEQSRLAARKYARVVQKL- 79 usage_00134.pdb 61 TGAKSEKSSRMAAQRYAKIIHKL- 83 usage_00136.pdb 61 TGAKSEKSSRMAAQRYAKIIHKL- 83 usage_00140.pdb 61 TGAKSEEQSRLAARKYARVVQKL- 83 usage_00143.pdb 61 TGAKSEEQSRLAARKYARVVQK-- 82 usage_00145.pdb 61 TGAKSEEQSRLAARKYARVVQK-- 82 usage_00147.pdb 55 TGAKSEKSSR-AAQRYAKIIHK-- 75 usage_00151.pdb 57 TGAKSEDDSKLASRKYARIIQKIG 80 usage_00164.pdb 57 TGAKSEKSSRMAAQRYAKIIHKLG 80 usage_00166.pdb 57 TGAKSEKSSRMAAQRYAKIIHKLG 80 usage_00168.pdb 61 TGAKSEEQSRLAARKYARVVQKL- 83 TGAKSE S A YA K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################