################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:56 2021 # Report_file: c_1252_116.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00170.pdb # 2: usage_00260.pdb # 3: usage_00492.pdb # 4: usage_00868.pdb # 5: usage_00872.pdb # 6: usage_00873.pdb # 7: usage_00968.pdb # 8: usage_00985.pdb # 9: usage_01371.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 52 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 52 ( 59.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00170.pdb 1 -DFV-LGDRD-----G------TTCEPGLVDLVERELR---EKGY-TVAR-- 33 usage_00260.pdb 1 L--I-DLPGP-----E---------LDKDTAAYLREHG---I--G-AVCLF- 28 usage_00492.pdb 1 -RIP-LD--P-------FVTDL-----DGESARLRAAG---P--LAAVELP- 30 usage_00868.pdb 1 -PVRDWP--A----LDLD----GPEF-DPVLAELMREG---P--LTRVRLP- 34 usage_00872.pdb 1 --RDWPA--L-----DLD----GPEF-DPVLAELMREG---P--LTRVRLP- 32 usage_00873.pdb 1 --RDWPA--L-----DLD----GPEF-DPVLAELMREG---P--LTRVRLP- 32 usage_00968.pdb 1 -VFG-CFNRL-----S--------MIGPEVLDLWAKILLALP--RARLRLIA 35 usage_00985.pdb 1 -TTVPDL--ESDSF----HVDW-----YRTYAELRETA---P--VTPVRFL- 34 usage_01371.pdb 1 -QFV-IT--A------------Q-EW-DPNFEEALMEN---P--SLAFVR-- 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################