################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:04 2021 # Report_file: c_0669_68.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00013.pdb # 2: usage_00022.pdb # 3: usage_00041.pdb # 4: usage_00179.pdb # 5: usage_00180.pdb # 6: usage_00193.pdb # 7: usage_00367.pdb # 8: usage_00922.pdb # 9: usage_00923.pdb # 10: usage_00940.pdb # 11: usage_00941.pdb # 12: usage_01016.pdb # 13: usage_01017.pdb # 14: usage_01074.pdb # 15: usage_01173.pdb # 16: usage_01174.pdb # 17: usage_01178.pdb # 18: usage_01611.pdb # 19: usage_01612.pdb # 20: usage_01680.pdb # 21: usage_01693.pdb # 22: usage_01694.pdb # 23: usage_01695.pdb # 24: usage_01709.pdb # 25: usage_01724.pdb # # Length: 65 # Identity: 12/ 65 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 65 ( 18.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 65 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVEVMKGVTSTRV 46 usage_00022.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_00041.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVEVMKGVTSTRV 46 usage_00179.pdb 1 --------------KSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTR 46 usage_00180.pdb 1 --------------KSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTR 46 usage_00193.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_00367.pdb 1 GVEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVM------- 53 usage_00922.pdb 1 --------------KNVITLDNGILNQVQKWDGKETVIKRKVMDGNLVVECTMNTVTSKR 46 usage_00923.pdb 1 --------------KNVITLDNGILNQVQKWDGKETVIKRKVMDGNLVVECTMNTVTSKR 46 usage_00940.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_00941.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_01016.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_01017.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_01074.pdb 1 -VEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMK------ 53 usage_01173.pdb 1 --------------ETVCTFQDGALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTR 46 usage_01174.pdb 1 --------------ETVCTFQDGALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTR 46 usage_01178.pdb 1 --------------KSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTR 46 usage_01611.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_01612.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTR 46 usage_01680.pdb 1 --------------KNVITLDNGILNQVQKWDGKETVIKRKVMDGNLVVECTMNTVTSKR 46 usage_01693.pdb 1 --------------KSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTR 46 usage_01694.pdb 1 --------------KSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTR 46 usage_01695.pdb 1 --------------KSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTR 46 usage_01709.pdb 1 --------------KSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVEVMKGVTSTRV 46 usage_01724.pdb 1 --------------KSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTR 46 T G L Q WDGK I RK E usage_00013.pdb 47 YER-- 49 usage_00022.pdb 47 VYER- 50 usage_00041.pdb 47 YER-- 49 usage_00179.pdb 47 VYER- 50 usage_00180.pdb 47 VYER- 50 usage_00193.pdb 47 VYER- 50 usage_00367.pdb ----- usage_00922.pdb 47 VYE-- 49 usage_00923.pdb 47 VYE-- 49 usage_00940.pdb 47 VYER- 50 usage_00941.pdb 47 VYER- 50 usage_01016.pdb 47 VYER- 50 usage_01017.pdb 47 VYER- 50 usage_01074.pdb ----- usage_01173.pdb 47 VYEK- 50 usage_01174.pdb 47 VYEKV 51 usage_01178.pdb 47 VYER- 50 usage_01611.pdb 47 VYER- 50 usage_01612.pdb 47 VYER- 50 usage_01680.pdb 47 VYE-- 49 usage_01693.pdb 47 IYEKV 51 usage_01694.pdb 47 IYEK- 50 usage_01695.pdb 47 IYEKV 51 usage_01709.pdb 47 YER-- 49 usage_01724.pdb 47 VYER- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################