################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:03 2021 # Report_file: c_0814_6.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00255.pdb # 2: usage_00256.pdb # 3: usage_00379.pdb # 4: usage_00380.pdb # 5: usage_00381.pdb # 6: usage_00382.pdb # 7: usage_00383.pdb # 8: usage_00384.pdb # 9: usage_00385.pdb # 10: usage_00386.pdb # 11: usage_00387.pdb # 12: usage_00388.pdb # 13: usage_00389.pdb # 14: usage_00390.pdb # 15: usage_00477.pdb # 16: usage_00478.pdb # # Length: 80 # Identity: 64/ 80 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 80 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 80 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00255.pdb 1 TPKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSSTIFE 60 usage_00256.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSSTIFE 59 usage_00379.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 59 usage_00380.pdb 1 --KDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 58 usage_00381.pdb 1 ------IKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 54 usage_00382.pdb 1 ------IKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 54 usage_00383.pdb 1 ---DQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 57 usage_00384.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 59 usage_00385.pdb 1 --------------FKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 46 usage_00386.pdb 1 ----QEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 56 usage_00387.pdb 1 --KDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 58 usage_00388.pdb 1 --KDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 58 usage_00389.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 59 usage_00390.pdb 1 --KDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSNTIFE 58 usage_00477.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSSTIFE 59 usage_00478.pdb 1 -PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSSTIFE 59 FKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNS TIFE usage_00255.pdb 61 LGSVSKLFTATAGGYAKNKG 80 usage_00256.pdb 60 LGSVSKLFTATAGGYAKNKG 79 usage_00379.pdb 60 LGSVSKLFTATAGGYAKNKG 79 usage_00380.pdb 59 LGSVSKLFTATAGGYAKNKG 78 usage_00381.pdb 55 LGSVSKLFTATAGGYAKNKG 74 usage_00382.pdb 55 LGSVSKLFTATAGGYAKNKG 74 usage_00383.pdb 58 LGSVSKLFTATAGGYAKNKG 77 usage_00384.pdb 60 LGSVSKLFTATAGGYAKNKG 79 usage_00385.pdb 47 LGSVSKLFTATAGGYAKNKG 66 usage_00386.pdb 57 LGSVSKLFTATAGGYAKNKG 76 usage_00387.pdb 59 LGSVSKLFTATAGGYAKNKG 78 usage_00388.pdb 59 LGSVSKLFTATAGGYAKNKG 78 usage_00389.pdb 60 LGSVSKLFTATAGGYAKNKG 79 usage_00390.pdb 59 LGSVSKLFTATAGGYAKNKG 78 usage_00477.pdb 60 LGSVSKLFTATAGAYAKNKG 79 usage_00478.pdb 60 LGSVSKLFTATAGAYAKNKG 79 LGSVSKLFTATAG YAKNKG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################