################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:36 2021 # Report_file: c_0224_17.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00087.pdb # 2: usage_00122.pdb # 3: usage_00134.pdb # 4: usage_00167.pdb # 5: usage_00177.pdb # # Length: 155 # Identity: 12/155 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/155 ( 23.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/155 ( 38.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 PIVIKADGLAAGK------GVTVA-TEEEAIACLHDFL---E-DEKFGDAS-ASVVIEEY 48 usage_00122.pdb 1 PLVVKADGLAQGK------GTVICHTHEEAYNAVDAML---V-HHKFGEAG-CAIIIEEF 49 usage_00134.pdb 1 PVIVKATDL-----------IYIAKKEEEAIDGFNETNLTK---------R-DYCIVEEF 39 usage_00167.pdb 1 -------------IVIKAKGVIVAMTLEEAEAAVHDML---AGNA-FGDAGHRI-VIEEF 42 usage_00177.pdb 1 PIVIKADGLAAGK------GVTVAMTEEEAIACLHDFL---E-DEKFGDAS-ASVVIEEY 49 a t EEA l iEE usage_00087.pdb 49 LSGEEFSL-AFVKGEKVYP-VIAQDHKRAFDGDKGPNTGG-GAYSPVPQISEETVRHAVE 105 usage_00122.pdb 50 LEGKEISFFTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQ 109 usage_00134.pdb 40 IEGYEFGAQAFVYKNDVLF-VPHGDETY-----SHT-AVPVGHYVPLDV--KDDIIEKTK 90 usage_00167.pdb 43 LDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVTDDVHQRTME 102 usage_00177.pdb 50 LSGEEFSLMAFVKGEKVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQISEETVRHAVE 109 l G E s V g v qD k gp tgg G Ysp usage_00087.pdb 106 TIVKPAAKA-VQEGRSFTGVLYAGLLTE------- 132 usage_00122.pdb 110 KIIYPTIKAMFNMNIQFRGLLFAGIIIKK-NEPKL 143 usage_00134.pdb 91 TEVKKAIKALG---L-NNCAVNVDIL-K-DNEVYI 119 usage_00167.pdb 103 RIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKV 137 usage_00177.pdb 110 TIVKPAAKAMVQEGRSFTGVLYAGLMLTE------ 138 i p Ka g l ag #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################