################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:43 2021 # Report_file: c_0821_38.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00145.pdb # 2: usage_00452.pdb # 3: usage_00473.pdb # 4: usage_00804.pdb # 5: usage_00886.pdb # 6: usage_01103.pdb # 7: usage_01104.pdb # 8: usage_01167.pdb # 9: usage_01171.pdb # # Length: 94 # Identity: 46/ 94 ( 48.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 94 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 94 ( 48.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 ---------------LEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 45 usage_00452.pdb 1 --------QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 52 usage_00473.pdb 1 -----------MTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 49 usage_00804.pdb 1 WKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 60 usage_00886.pdb 1 ---------------LEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 45 usage_01103.pdb 1 --------QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 52 usage_01104.pdb 1 --------QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 52 usage_01167.pdb 1 ---SPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 57 usage_01171.pdb 1 WKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW 60 LEPF KQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRW usage_00145.pdb 46 GLTTPDG------------Y----ELHPD----- 58 usage_00452.pdb 53 GLTTPGY------------E----LH-------- 62 usage_00473.pdb 50 GLTTPDKKHQKEPPFLWMGY----ELHPD----- 74 usage_00804.pdb 61 GLYTPD---------------------------- 66 usage_00886.pdb 46 GLT--------------------------GYELH 53 usage_01103.pdb 53 GLTTPGY------------E----LH-------- 62 usage_01104.pdb 53 GLTTPGY------------E----LHPD------ 64 usage_01167.pdb 58 GLTTPDK------------KHQKE---------- 69 usage_01171.pdb 61 GLTTPDK------------KHQKE---------- 72 GLt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################