################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:50 2021 # Report_file: c_0040_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00076.pdb # 6: usage_00093.pdb # 7: usage_00122.pdb # 8: usage_00123.pdb # 9: usage_00124.pdb # # Length: 227 # Identity: 202/227 ( 89.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 202/227 ( 89.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/227 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 60 usage_00037.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 60 usage_00038.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGL-K--SSEKELHRGFQQLLQELNQPRDGFQL 57 usage_00039.pdb 1 -PVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 59 usage_00076.pdb 1 --VSISMSLAMLSLGAGSSTKMQILEGLGL----SSEKELHRGFQQLLQELNQPRDGFQL 54 usage_00093.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 60 usage_00122.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 60 usage_00123.pdb 1 ------------------STKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 42 usage_00124.pdb 1 SPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQL 60 STKMQILEGLGL SSEKELHRGFQQLLQELNQPRDGFQL usage_00002.pdb 61 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 120 usage_00037.pdb 61 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 120 usage_00038.pdb 58 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 117 usage_00039.pdb 60 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 119 usage_00076.pdb 55 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 114 usage_00093.pdb 61 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 120 usage_00122.pdb 61 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 120 usage_00123.pdb 43 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 102 usage_00124.pdb 61 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL 120 SLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDL usage_00002.pdb 121 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 180 usage_00037.pdb 121 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 180 usage_00038.pdb 118 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 177 usage_00039.pdb 120 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 179 usage_00076.pdb 115 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 174 usage_00093.pdb 121 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 180 usage_00122.pdb 121 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 180 usage_00123.pdb 103 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 162 usage_00124.pdb 121 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD 180 LKNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLD usage_00002.pdb 181 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLKMF 227 usage_00037.pdb 181 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLK-- 225 usage_00038.pdb 178 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLKM- 223 usage_00039.pdb 180 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLK-- 224 usage_00076.pdb 175 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLK-- 219 usage_00093.pdb 181 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWL--- 224 usage_00122.pdb 181 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLKMF 227 usage_00123.pdb 163 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLKM- 208 usage_00124.pdb 181 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWLK-- 225 RNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLRKWL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################