################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:17 2021 # Report_file: c_0786_41.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00038.pdb # 5: usage_00331.pdb # 6: usage_00757.pdb # 7: usage_00814.pdb # 8: usage_00815.pdb # 9: usage_01058.pdb # 10: usage_01088.pdb # # Length: 86 # Identity: 1/ 86 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 86 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 86 ( 51.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 --LP---MIAIGGYYGEP---LGSIADEMHNYQELGLAGVKFKVGGLSAAE--------- 43 usage_00036.pdb 1 --LP---MIAIGGYYGEP---LGSIADEMHNYQELGLAGVKFKVGGLSAAE--------- 43 usage_00037.pdb 1 --LP---MIAIGGYYGEP---LGSIADEMHNYQELGLAGVKFKVGGLSAAE--------- 43 usage_00038.pdb 1 --LP---MIAIGGYYGEP---LGSIADEMHNYQELGLAGVKFKVGGLSAAE--------- 43 usage_00331.pdb 1 -----------SYSDSPQWIS--RSVSNVEAQLKKGFEQIKVKIGGTSFKE--------- 38 usage_00757.pdb 1 ------LPIAIGGYYGEP---LGSIADE-HNYQELGLAGVKFKVGGLSAAE--------- 41 usage_00814.pdb 1 ----NELPIAIGGYYGEP---LGSIADE-HNYQELGLAGVKFKVGGLSAAE--------- 43 usage_00815.pdb 1 ----NELPIAIGGYYGEP---LGSIADE-HNYQELGLAGVKFKVGGLSAAE--------- 43 usage_01058.pdb 1 KRIP---ITW-AFSAG--SAS--DLIDEAAQKLDVGHRSFKFKMGAEPADT--------- 43 usage_01088.pdb 1 K-FV---IAAQNA---------G-NADALASLKDFGVNWIVLG--------HSERRAYYG 38 d G k k usage_00035.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_00036.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_00037.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_00038.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_00331.pdb 39 -DVRHINALQHTA-GSSITMILDA-- 60 usage_00757.pdb 42 -DAARITAAREAA-GDDFIICIDA-- 63 usage_00814.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_00815.pdb 44 -DAARITAAREAA-GDDFIICIDA-- 65 usage_01058.pdb 44 -DSRRVLDVLECI-PDECAVIVDP-- 65 usage_01088.pdb 39 ETNEIVADKVAAAVASGFMVIACIGE 64 d a d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################