################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:07 2021 # Report_file: c_0653_75.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00092.pdb # 2: usage_00093.pdb # 3: usage_00421.pdb # 4: usage_00659.pdb # 5: usage_00719.pdb # 6: usage_01213.pdb # # Length: 87 # Identity: 1/ 87 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 87 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/ 87 ( 71.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00092.pdb 1 --GT-LYADSVKGRT-ISRDKGK-------NTVYLQ-DSLKPEDTA-----------TYY 37 usage_00093.pdb 1 --GT-LYADSVKGRT-ISRDKGK-------NTVYLQ-DSLKPEDTA-----------TYY 37 usage_00421.pdb 1 S-SI-NYADTVKGRFTISRDNPK-------NTLFLQMTSLRSEDTA-----------IYY 40 usage_00659.pdb 1 --DM-NIWPEYKNRTIFDIT--N-------NLSIVI-LALRPSDEG-----------TYE 36 usage_00719.pdb 1 R--E-KH----SGRLRVTLDTSK-------KSSSLLITASRAADTA-----------SYF 35 usage_01213.pdb 1 -GNLWVAVFQG---Q-RIIKIS-TQQPEVLLDTVKI-P-----DPQVTSVAFGGPNLDEL 48 D y usage_00092.pdb 38 CAAG--G-YELRDRTYGQWGQ------ 55 usage_00093.pdb 38 CAAG--G-YELRDRTYGQWGQ------ 55 usage_00421.pdb 41 CTRGGTG-TRSLY-YFDYWGQ------ 59 usage_00659.pdb 37 CVVLKY------------EKDAFKR-- 49 usage_00719.pdb 36 CATDDD----SA--RQLTFG-----S- 50 usage_01213.pdb 49 YVTS---AG-----------------L 55 c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################