################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:54 2021 # Report_file: c_1172_393.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01644.pdb # 2: usage_01645.pdb # 3: usage_01927.pdb # 4: usage_05010.pdb # # Length: 69 # Identity: 3/ 69 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 69 ( 17.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 69 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01644.pdb 1 GGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGN-TPA----QVP--KHMA 53 usage_01645.pdb 1 GGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGN-TPA----QVP--KHMA 53 usage_01927.pdb 1 -IKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDD-----SGKKVST----WEP--QDQL 48 usage_05010.pdb 1 -AKGKTHTLGVNWYAN--EAVKVSANYVKAKTDK-------------ISNANGDDSGDGL 44 g e e a v V Yt p usage_01644.pdb 54 SLWADY-TF 61 usage_01645.pdb 54 SLWADY-TF 61 usage_01927.pdb 49 SLYTSY-KF 56 usage_05010.pdb 45 VMRLQYVF- 52 sl Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################