################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:59 2021 # Report_file: c_1297_32.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00308.pdb # 2: usage_00309.pdb # 3: usage_00409.pdb # 4: usage_00410.pdb # 5: usage_02611.pdb # 6: usage_02754.pdb # # Length: 69 # Identity: 3/ 69 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 69 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 69 ( 53.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00308.pdb 1 --GASVRQDVLGDL-SRNFIDAIIKEKINP-AGAPTYVPGEYK-------LG----EDFT 45 usage_00309.pdb 1 ---ASVRQDVLGDL-SRNFIDAIIKEKINP-AGAPTYVPGEYK-------LG----EDFT 44 usage_00409.pdb 1 --GASVRQDVLGDLMSRNFIDAIIKEKINP-AGAPTYVPGEYK-------LG----EDFT 46 usage_00410.pdb 1 ---ASVRQDVLGDLMSRNFIDAIIKEKINP-AGAPTYVPGEYK-------LG----EDFT 45 usage_02611.pdb 1 RYGASVRQDVLGDLMSRNFIDAIIKEKINP-AGAPTYVPGEYK-------LG----EDFT 48 usage_02754.pdb 1 ---------GCFWGPDAQFGSIK-------GVVSTRVGY--AGGTTNNPSYYNLGDH--S 40 vlgdl srnFidai agaptyvp yk lg e t usage_00308.pdb 46 YSVEFE--- 51 usage_00309.pdb 45 YSVEFE--- 50 usage_00409.pdb 47 YSVEFEVYP 55 usage_00410.pdb 46 YSVEFEVYP 54 usage_02611.pdb 49 YSVEF---- 53 usage_02754.pdb 41 ESIEIQ--- 46 ySvEf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################