################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:20 2021 # Report_file: c_0650_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00124.pdb # 2: usage_00577.pdb # 3: usage_00830.pdb # 4: usage_00863.pdb # 5: usage_00864.pdb # # Length: 84 # Identity: 65/ 84 ( 77.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 84 ( 77.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 84 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00124.pdb 1 YNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLS 60 usage_00577.pdb 1 YNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLS 60 usage_00830.pdb 1 YNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLS 60 usage_00863.pdb 1 YNFNSHKVYITADKQNNGIKANFTIRHNVEDGSVQLADHYQQNTPIGDGPVDLPDDHYLS 60 usage_00864.pdb 1 YNFNSHKVYITADKQNNGIKANFTIRHNVEDGSVQLADHYQQNTPI-------PDDHYLS 53 YN NSH VYI ADKQ NGIK NF IRHN EDGSVQLADHYQQNTPI PD HYLS usage_00124.pdb 61 TQSALSKDPNEKRDHMVLLEFVTA 84 usage_00577.pdb 61 TQSALSKDPNEKRDHMVLLEFVTA 84 usage_00830.pdb 61 TQSALSKDPNEKRDHMVLLEFVTA 84 usage_00863.pdb 61 TQTILSKDLNEKRDHMVLLEYVTA 84 usage_00864.pdb 54 TQTILSKDLNEKRDHMVLLEYVTA 77 TQ LSKD NEKRDHMVLLE VTA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################