################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:21 2021 # Report_file: c_0099_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00022.pdb # 2: usage_00023.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00051.pdb # 9: usage_00052.pdb # 10: usage_00119.pdb # 11: usage_00126.pdb # 12: usage_00127.pdb # # Length: 184 # Identity: 47/184 ( 25.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/184 ( 25.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/184 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--D-PAPALAEIARH-GVKAVHHPADL 56 usage_00023.pdb 1 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--D-PAPALAEIARHG-VKAVHHPADL 56 usage_00024.pdb 1 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--D-PAPALAEIARH-GVKAVHHPADL 56 usage_00025.pdb 1 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--D-PAPALAEIARH-GVKAVHHPADL 56 usage_00026.pdb 1 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--D-PAPALAEIARH-GVKAVHHPADL 56 usage_00048.pdb 1 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD- 59 usage_00049.pdb 1 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD- 59 usage_00051.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADL 59 usage_00052.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADL 59 usage_00119.pdb 1 -KAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADL 59 usage_00126.pdb 1 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRA-TLLAESVDTLTRKG-YDAHGVAFDV 58 usage_00127.pdb 1 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRA-TLLAESVDTLTRKG-YDAHGVAFDV 58 A TGS G G A LA AGA N D usage_00022.pdb 57 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 116 usage_00023.pdb 57 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 116 usage_00024.pdb 57 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 116 usage_00025.pdb 57 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 116 usage_00026.pdb 57 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 116 usage_00048.pdb 60 TKPSEIAD--A-VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRG 116 usage_00049.pdb 60 TKPSEIAD--A-VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRG 116 usage_00051.pdb 60 SDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAA 119 usage_00052.pdb 60 SDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAA 119 usage_00119.pdb 60 SDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAA 119 usage_00126.pdb 59 TDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRS 118 usage_00127.pdb 59 TDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRS 118 DIL NNAG Q W I NL F usage_00022.pdb 117 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 175 usage_00023.pdb 117 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 175 usage_00024.pdb 117 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 175 usage_00025.pdb 117 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 175 usage_00026.pdb 117 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 175 usage_00048.pdb 117 AIPP-KKKG-WGRIINIASAHGLVASPFKSAYVAAKHGI-GLTKTVALEVAESGVTVNSI 173 usage_00049.pdb 117 AIPP-KKKG-WGRIINIASAHGLVASPFKSAYVAAKHGI-GLTKTVALEVAESGVTVNSI 173 usage_00051.pdb 120 ALPIMQKQG-WGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAI 178 usage_00052.pdb 120 ALPIMQKQG-WGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAI 178 usage_00119.pdb 120 ALPIMQKQG-WGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAI 178 usage_00126.pdb 119 AAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAI 178 usage_00127.pdb 119 AAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAI 178 A G IINI S Y AAK G LT E A N I usage_00022.pdb 176 CPG- 178 usage_00023.pdb 176 CPG- 178 usage_00024.pdb 176 CPG- 178 usage_00025.pdb 176 CPG- 178 usage_00026.pdb 176 CPG- 178 usage_00048.pdb 174 CPG- 176 usage_00049.pdb 174 CPG- 176 usage_00051.pdb 179 CPG- 181 usage_00052.pdb 179 CPG- 181 usage_00119.pdb 179 CPG- 181 usage_00126.pdb 179 GPGY 182 usage_00127.pdb 179 GPGY 182 PG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################