################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:42 2021 # Report_file: c_0911_48.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00011.pdb # 2: usage_00020.pdb # 3: usage_00052.pdb # 4: usage_00077.pdb # 5: usage_00313.pdb # 6: usage_00314.pdb # 7: usage_00340.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 51 ( 2.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 51 ( 52.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --QIKL-EPS-----KLV-RIRGEAAQIVCSATN--AE---V-GFNVIL-- 34 usage_00020.pdb 1 QY--V----S-----KDMMAKAGDVTMIYCMYGS--NP-----MGYP-NYF 32 usage_00052.pdb 1 --PPKL-LYPMESKLTVQETQLGGSANLTCRAFF--GY-SGDVSPLI-YWM 44 usage_00077.pdb 1 --PLQVEPPE-----PVVAVALGASRQLTCRLAC--AD---RGASVQ-WR- 37 usage_00313.pdb 1 --KIET-TPE-----SRYLAQIGDSVSLTCSTTG--CE-----SPFF-SWR 35 usage_00314.pdb 1 --KIET-TPE-----SRYLAQIGDSVSLTCSTTG--CE-----SPFF-SWR 35 usage_00340.pdb 1 ---GKH-TFS-----EVEVFE--YLDAVTYSCDPAPG-P--D-PFSL-IG- 34 c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################