################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:08 2021 # Report_file: c_0338_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00045.pdb # 8: usage_00073.pdb # # Length: 94 # Identity: 10/ 94 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 94 ( 30.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 94 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00034.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00035.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00036.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00037.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00038.pdb 1 -VITVYKDCNYTGFSGGLTIGDYNLARLNSLGVLN--DDISSLRITQGYQAILYQDDNFG 57 usage_00045.pdb 1 GEVFLYKHVNFQGDSWKVTGNV--Y-DFRSVSGLN--DVVSSVKVGPNTKAFIFKDDRFN 55 usage_00073.pdb 1 -AVTFYEDINYGGASVSLQPGNYTLSQ--------LNDWMSSLKVPSGWTVDVYENDNFT 51 t Ykd Ny G S lt g l D SSl g a y dDnF usage_00033.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVIA 85 usage_00034.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVIA 85 usage_00035.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVIA 85 usage_00036.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVI- 84 usage_00037.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVI- 84 usage_00038.pdb 58 GASTVINSDN--SCLNT--TWNDK-VS-SIRVI- 84 usage_00045.pdb 56 GNFIRLEESSQVTDLT-TRNLNDAI-SSIVATFE 87 usage_00073.pdb 52 GTKWTYTSDT--PWV----------MT-SVKIYS 72 G sd l s s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################