################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:15 2021 # Report_file: c_1316_149.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00186.pdb # 2: usage_00187.pdb # 3: usage_00776.pdb # 4: usage_00777.pdb # 5: usage_01067.pdb # 6: usage_01068.pdb # 7: usage_01359.pdb # # Length: 45 # Identity: 26/ 45 ( 57.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 45 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 45 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00186.pdb 1 MCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFS- 44 usage_00187.pdb 1 -CTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFS- 43 usage_00776.pdb 1 -ATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSE 44 usage_00777.pdb 1 -ATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFS- 43 usage_01067.pdb 1 IATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSE 45 usage_01068.pdb 1 -ATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFS- 43 usage_01359.pdb 1 -CTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFSD 44 T T V GLV LEL KL D K IE YKNGF NLA F FS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################