################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:18 2021 # Report_file: c_0949_87.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00144.pdb # 2: usage_00475.pdb # 3: usage_00478.pdb # 4: usage_00635.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 69 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 69 ( 62.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 GLC-ITIYDLLTVEEGQLKPGDGSS-YINVTFRAVV-----FKPFL-------------- 39 usage_00475.pdb 1 ----MKKGTVKWFNA----------EKGYGFIQQEE-GPDVFVHFTAIEAD-GFRTLNEG 44 usage_00478.pdb 1 ---MAMNGTITTWFK----------DKGFGFIKDEN-GDNRYFHVIKVANPD--LIKKDA 44 usage_00635.pdb 1 ---GKMTGIVKWFNA----------DKGFGFITPDDGSKDVFVHFSAIQND-GYKSLDEG 46 g kg gfi f hf usage_00144.pdb --------- usage_00475.pdb 45 EHVEFEVEP 53 usage_00478.pdb 45 A-VTF---- 48 usage_00635.pdb 47 QKVSFT--- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################