################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:49 2021 # Report_file: c_0821_29.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00013.pdb # 2: usage_00468.pdb # 3: usage_01276.pdb # 4: usage_01277.pdb # # Length: 100 # Identity: 39/100 ( 39.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/100 ( 84.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/100 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 KHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSK------------DYVCVLRAVK 48 usage_00468.pdb 1 KEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRS-VGVMGDGRKYDWVVSLRAVE 59 usage_01276.pdb 1 KHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSKS-V--------YDYVCVLRAVK 51 usage_01277.pdb 1 KHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSKSVG--------YDYVCVLRAVK 52 KhklniLRevDdIFIndLkqygLYnqiSQAFaVlLssk DyVcvLRAVk usage_00013.pdb 49 TSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSS 88 usage_00468.pdb 60 TIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVY---- 95 usage_01276.pdb 52 TSSFMTANWYQIPYDILDKITTRILSEVKGVNRILY---- 87 usage_01277.pdb 53 TSSFMTANWYQIPYDILDKITTRILSEVKGVNRILY---- 88 TssFMTAnWyqiPYDiLdkittRIlsEVkGvnRilY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################