################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 09:51:44 2021 # Report_file: c_0729_7.html ################################################################################################ #==================================== # Aligned_structures: 70 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00007.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00017.pdb # 11: usage_00018.pdb # 12: usage_00019.pdb # 13: usage_00020.pdb # 14: usage_00021.pdb # 15: usage_00022.pdb # 16: usage_00023.pdb # 17: usage_00024.pdb # 18: usage_00025.pdb # 19: usage_00026.pdb # 20: usage_00027.pdb # 21: usage_00042.pdb # 22: usage_00043.pdb # 23: usage_00045.pdb # 24: usage_00046.pdb # 25: usage_00047.pdb # 26: usage_00048.pdb # 27: usage_00051.pdb # 28: usage_00052.pdb # 29: usage_00053.pdb # 30: usage_00054.pdb # 31: usage_00055.pdb # 32: usage_00056.pdb # 33: usage_00057.pdb # 34: usage_00058.pdb # 35: usage_00065.pdb # 36: usage_00066.pdb # 37: usage_00067.pdb # 38: usage_00069.pdb # 39: usage_00071.pdb # 40: usage_00072.pdb # 41: usage_00073.pdb # 42: usage_00074.pdb # 43: usage_00075.pdb # 44: usage_00076.pdb # 45: usage_00077.pdb # 46: usage_00078.pdb # 47: usage_00079.pdb # 48: usage_00081.pdb # 49: usage_00082.pdb # 50: usage_00083.pdb # 51: usage_00084.pdb # 52: usage_00086.pdb # 53: usage_00099.pdb # 54: usage_00100.pdb # 55: usage_00101.pdb # 56: usage_00102.pdb # 57: usage_00103.pdb # 58: usage_00105.pdb # 59: usage_00109.pdb # 60: usage_00110.pdb # 61: usage_00124.pdb # 62: usage_00127.pdb # 63: usage_00129.pdb # 64: usage_00130.pdb # 65: usage_00131.pdb # 66: usage_00137.pdb # 67: usage_00138.pdb # 68: usage_00139.pdb # 69: usage_00140.pdb # 70: usage_00141.pdb # # Length: 67 # Identity: 8/ 67 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 67 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 67 ( 53.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ----QYKLILNGKTLKGVLTIEAVDAATAE---KVFKQYANDLGVDGEWTYDDATKTFTV 53 usage_00005.pdb 1 ---MQYKLILNGKTLKGVLTIEAVDAATAE---KVFKQYANDLGVDGEWTYDDATKTFTV 54 usage_00007.pdb 1 ---MQYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 54 usage_00009.pdb 1 -AVTTYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 56 usage_00010.pdb 1 ---MTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00011.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00014.pdb 1 ---TTYKLVINGKTLKGETTTKAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00015.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYFNDNGVDGEWTYDDATKTFTV 54 usage_00016.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYFNDNGVDGEWTYDDATKTFTV 54 usage_00017.pdb 1 SGTMEYKLILNGKTLKGETTTCAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 57 usage_00018.pdb 1 ---TTYKLVINGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00019.pdb 1 ---TTYKLVINGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00020.pdb 1 -----FKLIINGKTLKGETTTEAVDAATAE---KVLKQYINDNGIDGEWTYDDATKTWTV 52 usage_00021.pdb 1 -----FKLIINGKTLKGETTTEAVDAATAE---KVFKQYANDNGIDGEWTYDDATKTFTV 52 usage_00022.pdb 1 -----YKLIL------GETTTEAVDAATAE---KVFKQYANDN--DGEWTYDDATKTFTV 44 usage_00023.pdb 1 ---DTYKLILNGKTLKGETTTEA-DAATAE---KVFKQYANDNGV-GEWTYDDATKTFTV 52 usage_00024.pdb 1 ----TYKLILNGKTLKGETTTEA-DAATAE---KVFKQYANDNGV-GEWTYDDATKTFTV 51 usage_00025.pdb 1 ---DTYKLILNG-GLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDGT---FTV 50 usage_00026.pdb 1 -----YKLILNG-GLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDGT---FTV 48 usage_00027.pdb 1 ---MTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00042.pdb 1 -----YKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 52 usage_00043.pdb 1 ---TTYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 54 usage_00045.pdb 1 ---TTYKLVINGKTLKGETTTKAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00046.pdb 1 ---TTYKLVINGKTLKGETTTKAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00047.pdb 1 ----TYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDAATKTFTV 53 usage_00048.pdb 1 ----TYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDAATKTFTV 53 usage_00051.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00052.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00053.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00054.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00055.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00056.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00057.pdb 1 ---MQYKLILNGKTLKGCTTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00058.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWCYDDATKTFTV 54 usage_00065.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00066.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00067.pdb 1 -----YKLILNLKQAKEEAIKELVDAATAE---KYFKLYANAKTVEGVWTYKDETKTFTV 52 usage_00069.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00071.pdb 1 ---TTYKLILNLKQAKEEAIKEAVDAGTAE---KYFKLIANAKTVEGVWTYKDEIKTFTV 54 usage_00072.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYFNDNGVDGEWTYDDATKTFTV 54 usage_00073.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYFNDNGVDGEWTYDDATKTFTV 54 usage_00074.pdb 1 -----YKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 52 usage_00075.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00076.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00077.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00078.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00079.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00081.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00082.pdb 1 ---TTYKLILNLKQAKEEAIKELVDAGTAE---KYFKLIANAKTVEGVWTYKDEIKTFTV 54 usage_00083.pdb 1 ------KLILNLKQAKEEAIKEAVDAGIAE---KYFKLIANAKTVEGVWTYKDEIKTFTV 51 usage_00084.pdb 1 ---MQYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 54 usage_00086.pdb 1 ---MQYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 54 usage_00099.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANEHGVDGEWTYDPETKTFTV 54 usage_00100.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAATAE---KVFKHYANEHGVHGHWTYDPETKTFTV 54 usage_00101.pdb 1 -----YKLFIVIGDRVVVVTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDAAKTFTV 52 usage_00102.pdb 1 -AMDTYKLVIVLNGTTFTYTTEAVDAATAE---KVFKQYANDNGVDGEWTYADATKTFTV 56 usage_00103.pdb 1 ---DTYKLVIVLNGTTFTYTTEAVDAATAE---KVFKQYANDNGVDGEWTYADATKTFTV 54 usage_00105.pdb 1 -----YLVVNKGQNAFYETLTKAVDAETAR---NAFIQSLKDDGVQGVWTYDDATKTFTV 52 usage_00109.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00110.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00124.pdb 1 ---MQYKLVINGKTLKGETTTKAVDAETAE---KAFKQYANDNGVDGVWTYDDATKTFTV 54 usage_00127.pdb 1 ---TTYKLILNGKTLKGETTTEAVDAETAE---RVFKEYAKKNGVDGEWTYDDATKTFTV 54 usage_00129.pdb 1 --MTTFKLIINGKTLKGEITIEAVDAAEAE---KIFKQYANDNGIDGEWTYDDATKTFTV 55 usage_00130.pdb 1 ---MTYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00131.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 usage_00137.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAT-AEVFQ------YADNGVDGEWTYDDATKTFTV 50 usage_00138.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAT-AEVFQ------YADNGVDGEWTYDDATKTFTV 50 usage_00139.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAT-AEVFQ------YADNGVDGEWTYDDATKTFTV 50 usage_00140.pdb 1 ---DTYKLILNGKTLKGETTTEAVDAT-AEVFQ------YADNGVDGEWTYDDATKTFTV 50 usage_00141.pdb 1 ---MQYKLILNGKTLKGETTTEAVDAATAE---KVFKQYANDNGVDGEWTYDDATKTFTV 54 kl DA Ae G WtY fTV usage_00004.pdb 54 T------ 54 usage_00005.pdb 55 T------ 55 usage_00007.pdb 55 TE----- 56 usage_00009.pdb 57 TEMVTEV 63 usage_00010.pdb 55 TE----- 56 usage_00011.pdb 55 T------ 55 usage_00014.pdb 55 TEK---- 57 usage_00015.pdb 55 TE----- 56 usage_00016.pdb 55 TE----- 56 usage_00017.pdb 58 TE----- 59 usage_00018.pdb 55 TE----- 56 usage_00019.pdb 55 TE----- 56 usage_00020.pdb 53 TE----- 54 usage_00021.pdb 53 TE----- 54 usage_00022.pdb 45 TE----- 46 usage_00023.pdb 53 T------ 53 usage_00024.pdb 52 TE----- 53 usage_00025.pdb 51 TE----- 52 usage_00026.pdb ------- usage_00027.pdb 55 TE----- 56 usage_00042.pdb 53 TE----- 54 usage_00043.pdb 55 TE----- 56 usage_00045.pdb 55 T------ 55 usage_00046.pdb 55 T------ 55 usage_00047.pdb 54 TE----- 55 usage_00048.pdb 54 TE----- 55 usage_00051.pdb 55 T------ 55 usage_00052.pdb 55 TE----- 56 usage_00053.pdb 55 TE----- 56 usage_00054.pdb 55 TE----- 56 usage_00055.pdb 55 TE----- 56 usage_00056.pdb 55 T------ 55 usage_00057.pdb 55 T------ 55 usage_00058.pdb 55 TE----- 56 usage_00065.pdb 55 TE----- 56 usage_00066.pdb 55 TE----- 56 usage_00067.pdb 53 TE----- 54 usage_00069.pdb ------- usage_00071.pdb 55 TE----- 56 usage_00072.pdb 55 TE----- 56 usage_00073.pdb 55 TE----- 56 usage_00074.pdb 53 TEG---- 55 usage_00075.pdb 55 TE----- 56 usage_00076.pdb ------- usage_00077.pdb 55 TE----- 56 usage_00078.pdb ------- usage_00079.pdb ------- usage_00081.pdb 55 TE----- 56 usage_00082.pdb 55 TE----- 56 usage_00083.pdb 52 TE----- 53 usage_00084.pdb 55 TE----- 56 usage_00086.pdb 55 TE----- 56 usage_00099.pdb 55 TE----- 56 usage_00100.pdb 55 T------ 55 usage_00101.pdb 53 TE----- 54 usage_00102.pdb 57 TE----- 58 usage_00103.pdb 55 T------ 55 usage_00105.pdb 53 QA----- 54 usage_00109.pdb 55 TE----- 56 usage_00110.pdb 55 TE----- 56 usage_00124.pdb 55 TE----- 56 usage_00127.pdb 55 TE----- 56 usage_00129.pdb 56 T------ 56 usage_00130.pdb 55 TE----- 56 usage_00131.pdb 55 TE----- 56 usage_00137.pdb 51 TE----- 52 usage_00138.pdb 51 TE----- 52 usage_00139.pdb 51 TE----- 52 usage_00140.pdb 51 TE----- 52 usage_00141.pdb 55 TE----- 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################