################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:11:32 2021 # Report_file: c_0121_23.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00018.pdb # 2: usage_00096.pdb # 3: usage_00144.pdb # 4: usage_00190.pdb # 5: usage_00393.pdb # 6: usage_00397.pdb # 7: usage_00398.pdb # 8: usage_00399.pdb # 9: usage_00445.pdb # 10: usage_00446.pdb # 11: usage_00447.pdb # 12: usage_00448.pdb # 13: usage_00487.pdb # 14: usage_00511.pdb # # Length: 122 # Identity: 43/122 ( 35.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/122 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/122 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -IQLQQSGPELVKPGASVKISCKASGYSFT-DYIMLWVKQSHGKSLEWIGNINPYYGSTS 58 usage_00096.pdb 1 -VQLQQSGPEVVKTGASVKISCKASGYSFT-GYFINWVKKNSGKSPEWIGHISSSYATST 58 usage_00144.pdb 1 -IQLQQSGPELVKPGASVKVSCKASGYSFT-DYFIYWVKQSHGKSLEWIGDIDPYNGDTS 58 usage_00190.pdb 1 -VQLQQSGPVLVKPGGSVKMSCKASEYT-LTSYLFQWVKQKSGQGLEWIGYIYPYNGGTR 58 usage_00393.pdb 1 EVQLQQSGPELVRPGASMKISCKASGYSFT-GYTMNWVKQSHGKNLEWIGLINPYNGGTS 59 usage_00397.pdb 1 -VQLLQSGPELEKPGASVMISCKA--------YNMNWVRQNIGKSLEWIGAIDPYYGGTS 51 usage_00398.pdb 1 -VQLLQSGPELEKPGASVMISCKASG-SFT-GYNMNWVRQNIGKSLEWIGAIDPYYGGTS 57 usage_00399.pdb 1 --QLLQSGPELEKPGASVMISCKASGSSFT-GYNMNWVRQNIGKSLEWIGAIDPYYGGTS 57 usage_00445.pdb 1 -VQLQQSGPELEKPGASVKISCKASGYSFT-GYTMNWVKQSHGKSLEWIGLITPYNGASS 58 usage_00446.pdb 1 -VQLQQSGPELEKPGASVKISCKASGYSFT-GYTMNWVKQSHGKSLEWIGLITPYNGASS 58 usage_00447.pdb 1 -VQLQQSGPELEKPGASVKISCKASGYSFT-GYTMNWVKQSHGKSLEWIGLITPYNGASS 58 usage_00448.pdb 1 -VQLQQSGPELEKPGASVKISCKASGYSFT-GYTMNWVKQSHGKSLEWIGLITPYNGASS 58 usage_00487.pdb 1 -VQLQQSGPELVKPGASVKISCKASGYSFT-GHLLNWVKQSHGKNLEWIGLVHPHNGAIT 58 usage_00511.pdb 1 -VQLQQSGPELVKPGASVRMSCKSSGYIFT-DFYMNWVRQSHGKSLDYIGYISPYSGVTG 58 QL QSGPel kpGaSv SCKa WV q Gk lewIG i p g usage_00018.pdb 59 YNLKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVYYCARKNY--YGSS-LDYWGQGTTLT 115 usage_00096.pdb 59 YNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSAVYYCVRSGN--YEEYAMDYWGQGTSVT 116 usage_00144.pdb 59 YNQKFRDKATLTVDQSSTTAFMHLNSLTSEDSAVYFCARG---------LRFWGQGTLVT 109 usage_00190.pdb 59 YNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSM--SDP--GANWGPGTLVT 114 usage_00393.pdb 60 YNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARDGDYYRYGRYFDYWGQGTTLT 119 usage_00397.pdb 52 YNQKFKGRATLTVDKSSSTAYMHLKSLTSEDSAVYYCVSG---------MEYWGQGTSVT 102 usage_00398.pdb 58 YNQKFKGRATLTVDKSSSTAYMHLKSLTSEDSAVYYCVSG---------MEYWGQGTSVT 108 usage_00399.pdb 58 YNQKFKGRATLTVDKSSSTAYMHLKSLTSEDSAVYYCVSG---------MEYWGQGTSVT 108 usage_00445.pdb 59 YNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGY--DGRG-FDYWGSGTPVT 115 usage_00446.pdb 59 YNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGY--DGRG-FDYWGSGTPVT 115 usage_00447.pdb 59 YNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGY--DGRG-FDYWGSGTPVT 115 usage_00448.pdb 59 YNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGY--DGRG-FDYWGSGTPVT 115 usage_00487.pdb 59 YNQKFKDKATLTVDRSSTTAYIELVRLTSNDSAVYYCAREDF--RYHYSMDYWGQGTSVT 116 usage_00511.pdb 59 YNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCAGSSG--NKWA-MDYWGHGASVT 115 YN KF AtlTvD SS TA L sLTSeDSAVY C WG Gt T usage_00018.pdb 116 VS 117 usage_00096.pdb 117 VS 118 usage_00144.pdb 110 VS 111 usage_00190.pdb 115 VS 116 usage_00393.pdb 120 VS 121 usage_00397.pdb 103 VS 104 usage_00398.pdb 109 VS 110 usage_00399.pdb 109 VS 110 usage_00445.pdb 116 VS 117 usage_00446.pdb 116 VS 117 usage_00447.pdb 116 VS 117 usage_00448.pdb 116 VS 117 usage_00487.pdb 117 VS 118 usage_00511.pdb 116 VS 117 VS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################