################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:37 2021 # Report_file: c_0230_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01736.pdb # 2: usage_01743.pdb # 3: usage_02399.pdb # 4: usage_02407.pdb # 5: usage_02525.pdb # 6: usage_02528.pdb # 7: usage_02875.pdb # 8: usage_02985.pdb # # Length: 140 # Identity: 123/140 ( 87.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/140 ( 87.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/140 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01736.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 usage_01743.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 usage_02399.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 usage_02407.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 usage_02525.pdb 1 -LFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 59 usage_02528.pdb 1 -LFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 59 usage_02875.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 usage_02985.pdb 1 HLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ 60 LFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQ usage_01736.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 usage_01743.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 usage_02399.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 usage_02407.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 usage_02525.pdb 60 NAEMRPLGCCMILIGID---GPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK----- 111 usage_02528.pdb 60 NAEMRPLGCCMILIGID---GPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK----- 111 usage_02875.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 usage_02985.pdb 61 NAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKF 120 NAEMRPLGCCMILIGID GPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK usage_01736.pdb 121 DWTFEQTVETAITCLSTVL- 139 usage_01743.pdb 121 DWTFEQTVETAITCLSTVLS 140 usage_02399.pdb 121 DWTFEQTVETAITCLST--- 137 usage_02407.pdb 121 DWTFEQTVETAITCLST--- 137 usage_02525.pdb 112 -----QTVETAITCLSTVLS 126 usage_02528.pdb 112 -----QTVETAITCLSTVLS 126 usage_02875.pdb 121 DWTFEQTVETAITCLSTVLS 140 usage_02985.pdb 121 DWTFEQTVETAITCLSTVL- 139 QTVETAITCLST #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################