################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:26 2021 # Report_file: c_0981_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00045.pdb # 2: usage_00191.pdb # 3: usage_00192.pdb # 4: usage_00223.pdb # 5: usage_00224.pdb # 6: usage_00376.pdb # # Length: 57 # Identity: 5/ 57 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 57 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 57 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 --LIRSV-ATD-K-RAFFIICTSKLG-PPQIYELVALTSSDKNTWMELLEEAVRNA- 50 usage_00191.pdb 1 AVLIRSV-ATD-K-RAFFIICTSKLG-PPQIYELVALTSSDKNTWMELLEEAVRNA- 52 usage_00192.pdb 1 --LIRSV-ATD-K-RAFFIICTSKLG-PPQIYELVALTSSDKNTWMELLEEAVRNA- 50 usage_00223.pdb 1 SFQVRDDD-NKKWSHMFLLIEDQ---G----YELFFKTRELKKKWMEQFEMAISNI- 48 usage_00224.pdb 1 -VLIRSV-ATD-K-RAFFIICTSKLG-PPQIYELVALTSSDKNTWMELLEEAVRNAT 52 usage_00376.pdb 1 NLIVRDI-ANQ-E-KGMFLISAA----PPEMYEVHTASRDDRSTWIRVIQQSVRTC- 49 R ff I YEl t dk tWme e avrn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################