################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:43 2021 # Report_file: c_1486_78.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00480.pdb # 2: usage_00535.pdb # 3: usage_00563.pdb # 4: usage_00943.pdb # 5: usage_00944.pdb # 6: usage_01131.pdb # 7: usage_01222.pdb # 8: usage_01301.pdb # 9: usage_01321.pdb # 10: usage_01322.pdb # 11: usage_01323.pdb # 12: usage_01421.pdb # 13: usage_01835.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 46 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 46 ( 71.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00480.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQ----- 30 usage_00535.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQ----- 30 usage_00563.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQGLRHMIAVRQSNP-- 33 usage_00943.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQSNP-- 33 usage_00944.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQ----- 30 usage_01131.pdb 1 ---DPDLFNWLMNHGK-----PADAELEMMVRLIQTRNRER----- 33 usage_01222.pdb 1 -------HEEVLA---AG-----KQAAQKLEQFVSILMASI----- 26 usage_01301.pdb 1 YFQGN--ETPLRL---LELTQ-T-----------REDLWRAAQALT 29 usage_01321.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQGLRHMIAVRQSNP-- 33 usage_01322.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQ----- 30 usage_01323.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQS---- 31 usage_01421.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQGLRHMIAVRQSNP-- 33 usage_01835.pdb 1 -------NEALYA---QRN-DPSTAAGQIYQDLRHMIAVRQ----- 30 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################