################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:57 2021 # Report_file: c_0293_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00115.pdb # 2: usage_00120.pdb # 3: usage_00189.pdb # 4: usage_00191.pdb # 5: usage_00213.pdb # 6: usage_00215.pdb # 7: usage_00293.pdb # 8: usage_00395.pdb # 9: usage_00440.pdb # # Length: 136 # Identity: 48/136 ( 35.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/136 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/136 ( 19.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 GTVYTAMD-ATGQEVAIKQMN------KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 53 usage_00120.pdb 1 GTVYTAMDVATGQEVAIKQMN------KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 54 usage_00189.pdb 1 GTVYTAMDVATGQEVAIKQMNLQ-----KELIINEILVMRENKNPNIVNYLDSYLVGDEL 55 usage_00191.pdb 1 GTVYTAMDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 59 usage_00213.pdb 1 GTVYTAMDVATGQEVAIKQMNL----------INEILVMRENKNPNIVNYLDSYLVGDEL 50 usage_00215.pdb 1 AVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMS-QSHPNVVTYYTSFVVKDEL 59 usage_00293.pdb 1 AVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 60 usage_00395.pdb 1 -TVYTAMDVATGQEVAIKQM-------------NEILVMRENKNPNIVNYLDSYLVGDEL 46 usage_00440.pdb 1 GTVYTAMDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 59 V A VAIK EI M PNiV Y S V DEL usage_00115.pdb 54 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 104 usage_00120.pdb 55 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 105 usage_00189.pdb 56 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 106 usage_00191.pdb 60 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 110 usage_00213.pdb 51 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 101 usage_00215.pdb 60 WLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLK 119 usage_00293.pdb 61 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVK 120 usage_00395.pdb 47 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 97 usage_00440.pdb 60 WVVMEYLAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 110 W VM L GGS D dE IA rE L Le LH N IHR K usage_00115.pdb 105 SDNILLGMDGSVKL-- 118 usage_00120.pdb 106 SDNILLGMDGSVKL-- 119 usage_00189.pdb 107 SDNILLGMDGSVKL-- 120 usage_00191.pdb 111 SDNILLGMDGSVKL-- 124 usage_00213.pdb 102 SDNILLGMDGSVKL-- 115 usage_00215.pdb 120 AGNILLGEDGSVQI-- 133 usage_00293.pdb 121 AGNILLGEDGSVQI-- 134 usage_00395.pdb 98 SDNILLGMDGSVKL-- 111 usage_00440.pdb 111 SDNILLGMDGSVKLTD 126 NILLG DGSV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################