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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:05:47 2021
# Report_file: c_0545_99.html
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#====================================
# Aligned_structures: 4
#   1: usage_00098.pdb
#   2: usage_00263.pdb
#   3: usage_00265.pdb
#   4: usage_00587.pdb
#
# Length:        134
# Identity:       80/134 ( 59.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     80/134 ( 59.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/134 ( 14.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00098.pdb         1  PSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEK   60
usage_00263.pdb         1  ---KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKK   56
usage_00265.pdb         1  ----DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKK   55
usage_00587.pdb         1  ----QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEK   56
                                 YA  LK  GN FF  K    AIKYY  A EL    PVFYSN SACY S GDL K

usage_00098.pdb        61  VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLS-----------PMLERN  109
usage_00263.pdb        57  VVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN  116
usage_00265.pdb        56  VVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN  115
usage_00587.pdb        57  VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLSL-N------IEPMLERN  109
                           V E  TKALE KPD SK LLRRASANE LG F DAMFDLSVLS           PMLERN

usage_00098.pdb       110  LNKQAMKVLNENL-  122
usage_00263.pdb       117  LNKQAMSKLKE---  127
usage_00265.pdb       116  LNKQAMSKLKEK--  127
usage_00587.pdb       110  LNKQAMKVLNENLS  123
                           LNKQAM  L E   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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