################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:58 2021 # Report_file: c_0856_44.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00232.pdb # 2: usage_00312.pdb # 3: usage_00318.pdb # 4: usage_00319.pdb # # Length: 83 # Identity: 24/ 83 ( 28.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 83 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 83 ( 21.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00232.pdb 1 PISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVC 60 usage_00312.pdb 1 ------------------LMAKADQLGKYIRKRLENIAQRSGNVGSVRGRGLFFGIDIIE 42 usage_00318.pdb 1 -ISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVC 59 usage_00319.pdb 1 PISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVC 60 LpAmAerkGrllRdgLselAkRhpliGdiRGRGLacGmelvc usage_00232.pdb 61 DRQSREPARAETAKLIYRAYQLG 83 usage_00312.pdb 43 SDGSRNPAPALTKILIEDMRERG 65 usage_00318.pdb 60 DRQSREPARAETAKLIYRAYQLG 82 usage_00319.pdb 61 DRQSREPARAETAKLIYRAYQLG 83 drqSRePArAeTakLIyrayqlG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################