################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:53 2021 # Report_file: c_0590_69.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00073.pdb # 2: usage_00158.pdb # 3: usage_00159.pdb # 4: usage_00160.pdb # 5: usage_00223.pdb # 6: usage_00320.pdb # # Length: 117 # Identity: 6/117 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/117 ( 16.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/117 ( 41.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 -GFL-CFAINNT-S-EDIHQYREQIKRVKDS----D-DVPMVLVGNK----CDL-A-AR- 44 usage_00158.pdb 1 -GFALVYSITAQSTFNDLQDLREQILRVKDT----D-DVPMILVGNK----CDL-EDERV 49 usage_00159.pdb 1 MGFLLMFDLTSQQSFLNVRNWMSQLQ-----ANAYCENPDIVLIGNK----ADLPD-QRE 50 usage_00160.pdb 1 MGFLLMFDLTSQQSFLNVRNWMSQLQ-----ANAYCENPDIVLIGNK----ADLPD-QRE 50 usage_00223.pdb 1 --AILVFDVSSMESFESCKAWFELLKSARPD---RERPLRAVLVANKTDLP--------Q 47 usage_00320.pdb 1 -GFLCVFAINNTKSFEDIHQYREQIKRVKDS----D-DVPMVLVGNK----CDL-A-ART 48 f f s q vL gNK usage_00073.pdb 45 VESRQAQDLARSY-GIPYIETS---AKTRQGVEDAFYTLVREI-------------- 83 usage_00158.pdb 50 VGKEQGQNLARQWNNCAFLESS---AKSKINVNEIFYDLVRQINS------------ 91 usage_00159.pdb 51 VNERQARELAEKY-GIPYFETS---AATGQNVEKSVETLLDLIMKRMEKC------- 96 usage_00160.pdb 51 VNERQARELAEKY-GIPYFETS---AATGQNVEKSVETLLDLIMKRMEKC------- 96 usage_00223.pdb 48 VRLDMAQDWATTN-TLDFFDVSANP--PGKDADAPFLSIATTFYRNYEDKVAAFQDA 101 usage_00320.pdb 49 VESRQAQDLARSY-GIPYIETS---AKTRQGVEDAFYTLVREIRQH----------- 90 V qa lA e S v l i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################