################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:21 2021 # Report_file: c_0751_32.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00062.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00105.pdb # 6: usage_00239.pdb # 7: usage_00240.pdb # 8: usage_00241.pdb # 9: usage_00244.pdb # # Length: 92 # Identity: 14/ 92 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 92 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 92 ( 5.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 FDRSVL-VRIETENGAVGWGETYGLVAPRATMEIIDDLLADFTIGRDPFDAAAIHDDLYD 59 usage_00062.pdb 1 --DLAVVKVETNEPGLYGLGCATFTQRIFAVKSAIDEYMAPFLIGKDPTRIEDIWQSAAV 58 usage_00063.pdb 1 --DLAVVKVETNEPGLYGLGCATFTQRIFAVKSAIDEYMAPFLIGKDPTRIEDIWQSAAV 58 usage_00064.pdb 1 --DLAVVKVETNEPGLYGLGCATFTQRIFAVKSAIDEYMAPFLIGKDPTRIEDIWQSAAV 58 usage_00105.pdb 1 --DLAVVKIETNEPGLYGLGCATFTQRIFAVKSAIDEYMAPFLVGKDPTRIEDIWQSGVV 58 usage_00239.pdb 1 --NLIT-VVVETNEGVTGFGCATFQQRPLAVKTMVDEYLKPILIGKNANNIEDLWQMMMV 57 usage_00240.pdb 1 -HNLIT-VVVETNEGVTGFGCATFQQRPLAVKTMVDEYLKPILIGKNANNIEDLWQMMMV 58 usage_00241.pdb 1 -HNLIT-VVVETNEGVTGFGCATFQQRPLAVKTMVDEYLKPILIGKNANNIEDLWQMMMV 58 usage_00244.pdb 1 -DRSVL-VRMTTEAGTVGWGETYGIVAPGAVAALINDLLAGFVIGRDASDPSAVYDDLYD 58 G G G Av d iG usage_00002.pdb 60 LMRVRGYTGGFYVDALAAIDIALWDLAGKLAG 91 usage_00062.pdb 59 SGY-W-RNGPIMNNALSGVDMALWDIKGKLAG 88 usage_00063.pdb 59 SGY-W-RNGPIMNNALSGVDMALWDIKGKLAG 88 usage_00064.pdb 59 SGY-W-RNGPIMNNALSGVDMALWDIKGKLAG 88 usage_00105.pdb 59 SGY-W-RNGPIMNNALSGVDMALWDIKGKLAG 88 usage_00239.pdb 58 NAY-W-RNGPVINNAISGVDMALWDIKAKLAG 87 usage_00240.pdb 59 NAY-W-RNGPVINNAISGVDMALWDIKAKLAG 88 usage_00241.pdb 59 NAY-W-RNGPVINNAISGVDMALWDIKAKLAG 88 usage_00244.pdb 59 MMRVRGYTGGFYVDALAALDIALWDIAGQEAG 90 G A D ALWDi klAG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################