################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:14 2021 # Report_file: c_0355_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00020.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00081.pdb # 7: usage_00082.pdb # 8: usage_00083.pdb # # Length: 149 # Identity: 133/149 ( 89.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 134/149 ( 89.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/149 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVAL-----DIVYVPEP----RVLGASETIANIYTTQH 51 usage_00027.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD-DIVYVPEPMTYWRVLGASETIANIYTTQH 59 usage_00028.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD-DIVYVPEPMTYWRVLGASETIANIYTTQH 59 usage_00059.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVAL----GDIVYVPEPMTYWRVLGASETIANIYTTQH 56 usage_00060.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVAL----GDIVYVPEPMTYWRVLGASETIANIYTTQH 56 usage_00081.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD-DIVYVPEPMTYWRVLGASETIANIYTTQH 59 usage_00082.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD-DIVYVPEPMTYWRVLGASETIANIYTTQH 59 usage_00083.pdb 1 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD-DIVYVPEPMTYWRVLGASETIANIYTTQH 59 PTLLRVYIDGPHGMGKTTTTQLLVAL DIVYVPEP RVLGASETIANIYTTQH usage_00020.pdb 52 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAG---P-PPALTLIFDRHP 107 usage_00027.pdb 60 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEA----P-PPALTLIFDRHP 114 usage_00028.pdb 60 RLDQGEISAGDAAVVMTSANITMGMPYAVTDAVLAPHIGGEAGS--P-PPALTLIFDRHP 116 usage_00059.pdb 57 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSAP-PPALTLIFDRHP 115 usage_00060.pdb 57 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEA-----GPPALTLIFDRHP 111 usage_00081.pdb 60 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEA----P-PPALTLIFDRHP 114 usage_00082.pdb 60 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEA----P-PPALTLIFDRHP 114 usage_00083.pdb 60 RLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEA----P-PPALTLIFDRHP 114 RLDQGEISAGDAAVVMTSAqITMGMPYAVTDAVLAPHIGGEA PPALTLIFDRHP usage_00020.pdb 108 IAALLCYPAARYLMGSMTPQAVLAFVALI 136 usage_00027.pdb 115 IAALLCYPAARYLMGSMTPQAVLAFVALI 143 usage_00028.pdb 117 IAALLCYPAARYLMGSMTPQAVLAFVALI 145 usage_00059.pdb 116 IAALLCYPAARYLMGSMTPQAVLAFVALI 144 usage_00060.pdb 112 IAALLCYPAARYLMGSMTPQAVLAFVALI 140 usage_00081.pdb 115 IAALLCYPAARYLMGSMTPQAVLAFVALI 143 usage_00082.pdb 115 IAALLCYPAARYLMGSMTPQAVLAFVALI 143 usage_00083.pdb 115 IAALLCYPAARYLMGSMTPQAVLAFVALI 143 IAALLCYPAARYLMGSMTPQAVLAFVALI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################