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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:07:54 2021
# Report_file: c_1124_60.html
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#====================================
# Aligned_structures: 4
#   1: usage_00017.pdb
#   2: usage_00408.pdb
#   3: usage_00474.pdb
#   4: usage_00475.pdb
#
# Length:         88
# Identity:        7/ 88 (  8.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     38/ 88 ( 43.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           43/ 88 ( 48.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00017.pdb         1  -RV---------DKLTQGRQTYD-------------WTLNRNQPAATALANTIEVFRKNG   37
usage_00408.pdb         1  R--NRREEILQSLALMLES----------ITTAKLAASVGV---SEAALYRHFPSK----   41
usage_00474.pdb         1  ---NRREEILQALAEMLES----N-----ITTAKLAKQVGV---SEAALYRHFPSK----   41
usage_00475.pdb         1  ----RREEILQSLALMLES----SDGSQRITTAKLAASVGV---SEAALYRHFPSK----   45
                                       lalmles                   vgv   seaALyrhfpsk    

usage_00017.pdb        38  YKLNESGRLIDFLKDVLLSFEND-----   60
usage_00408.pdb        42  TRMFD--SLIEFIEDSLITRINLILKDE   67
usage_00474.pdb        42  TRMFE--GLIEFIEESLMSRINRIFDE-   66
usage_00475.pdb        46  TRMFD--SLIEFIEDSLITRINLILKDE   71
                           trmf    LIeFiedsL  riN      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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