################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:45 2021 # Report_file: c_1153_24.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00306.pdb # 2: usage_00334.pdb # 3: usage_00409.pdb # 4: usage_00483.pdb # 5: usage_01547.pdb # 6: usage_01549.pdb # 7: usage_01560.pdb # 8: usage_01843.pdb # 9: usage_01847.pdb # 10: usage_01850.pdb # 11: usage_02472.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 40 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 40 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00306.pdb 1 RVNILAS-----DGVQKNFEGKLVGADRAKDLAV-LK--- 31 usage_00334.pdb 1 KISIQLN-------DGREFDAKLIGSDDQSDIAL-LQIQN 32 usage_00409.pdb 1 LRVAVLERHRFRP-EGLMAYFRITE----RGIEDVE---- 31 usage_00483.pdb 1 RVKVELK-------NGATYEAKIKDVDEKADIAL-IKID- 31 usage_01547.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 31 usage_01549.pdb 1 -IIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 30 usage_01560.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 31 usage_01843.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKINA 32 usage_01847.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 31 usage_01850.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 31 usage_02472.pdb 1 QIIVALQ-------DGRVFEALLVGSDSLTDLAV-LKIN- 31 l g d a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################