################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:11 2021 # Report_file: c_1372_44.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00690.pdb # 2: usage_00832.pdb # 3: usage_00833.pdb # 4: usage_00865.pdb # 5: usage_00906.pdb # 6: usage_00975.pdb # 7: usage_00976.pdb # # Length: 48 # Identity: 4/ 48 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 48 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 48 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00690.pdb 1 KEEAKQAFKELLKEKRVPSN----ASWEQAMKMIINDPRYSALAKL-- 42 usage_00832.pdb 1 DAGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAKIG 42 usage_00833.pdb 1 DAGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAKI- 41 usage_00865.pdb 1 DAGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAKI- 41 usage_00906.pdb 1 DAGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAKI- 41 usage_00975.pdb 1 -AGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAKI- 40 usage_00976.pdb 1 DAGFQAFADKVLDAAV----AGKITDVEVLKAQF--EEERVALVAK-- 40 agfqafadkvLdaav tdvEvlkaqf eeervALvak #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################