################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:10 2021 # Report_file: c_0608_13.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00044.pdb # 2: usage_00046.pdb # 3: usage_00383.pdb # 4: usage_00385.pdb # # Length: 101 # Identity: 80/101 ( 79.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/101 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/101 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN 60 usage_00046.pdb 1 VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN 60 usage_00383.pdb 1 VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN 60 usage_00385.pdb 1 VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN 60 VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN usage_00044.pdb 61 LVKKG--THNPNFVRKP---DAALVDFLCENADVITKVTLA 96 usage_00046.pdb 61 LVKKG--THNPNFVRKP---DAALVDFLCENADVITKVTLA 96 usage_00383.pdb 61 LV---KKTHN--P-NFVRKPDAALVDFLCENADVITKVTLA 95 usage_00385.pdb 61 ---------------------AALVDFLCENADVITKVTLA 80 AALVDFLCENADVITKVTLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################