################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:51 2021 # Report_file: c_0305_16.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00014.pdb # 4: usage_00018.pdb # # Length: 132 # Identity: 26/132 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/132 ( 80.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/132 ( 19.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -RIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGE----LAKLAYFNDIAVGAV 55 usage_00002.pdb 1 SRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGE----LAKLAYFNDIAVGAV 56 usage_00014.pdb 1 -RIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGE----LAKLAYFNDIAVGAV 55 usage_00018.pdb 1 --CTLDNVYANNLGMLTKLAHVTVPNLYQDAFFSALFA-E-KDVHFTQMAYYSEIPVGGL 56 ieLgdVtphNikqLkrLnqVifPvsYnDkFykdvle g laklAYfndIaVGav usage_00001.pdb 56 CCRVDHS----QNQKRLYITLGCLAPYRRLGIGTK-LNHVLNICEKDGTFDNIYLHVQIS 110 usage_00002.pdb 57 CCRVDHS----QNQKRLYITLGCLAPYRRLGIGTK-LNHVLNICEKDGTFDNIYLHVQIS 111 usage_00014.pdb 56 CCRVDHS----QNQKRLYITLGCLAPYRRLGIGTK-LNHVLNICEKDGTFDNIYLHVQIS 110 usage_00018.pdb 57 VAKLVPKNELSLKGIQI-EFLGVLPNYRHKSIGSKLLKFAEDKCS-ECHQHNVFVYLPAV 114 ccrvdhs qnqkrl itLGcLapYRrlgIGtK LnhvlniCe dgtfdNiylhvqis usage_00001.pdb 111 NESAIDFYRKFG 122 usage_00002.pdb 112 NESAIDFYRKFG 123 usage_00014.pdb 111 N----------- 111 usage_00018.pdb 115 DDLTKQWFIAHG 126 n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################