################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:56 2021 # Report_file: c_1256_249.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00308.pdb # 2: usage_01227.pdb # 3: usage_02161.pdb # 4: usage_02162.pdb # 5: usage_02163.pdb # 6: usage_02164.pdb # 7: usage_02429.pdb # 8: usage_02926.pdb # 9: usage_03959.pdb # # Length: 80 # Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 80 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 80 ( 70.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00308.pdb 1 -KK--IGVLTSG--GDA---------------P--------GMNAAIRGVVRSALTEGLE 32 usage_01227.pdb 1 ------HGIAVA--G-T---------------H--------GKTTTTAMISMIYTQAKLD 28 usage_02161.pdb 1 -----RTLAVIS--A-GL-------STPSSTRQ--------IADSISEAVTAAVSARGEA 37 usage_02162.pdb 1 -----RTLAVIS--A-GL-------STPSSTRQ--------IADSISEAVTAAVSARGEA 37 usage_02163.pdb 1 -----RTLAVIS--A-GL-------STPSSTRQ--------IADSISEAVTAAVSARGEA 37 usage_02164.pdb 1 -R----RLLLIP--E-N--------HTR---NT--------FYLRNVHALTHILRQAGLE 33 usage_02429.pdb 1 -----RKIVLFG--D-S-ITAGYLDEA-----V---------SPVLVDLVKRDIAAMGLE 37 usage_02926.pdb 1 R-DLRVTWNIHTAVA-PD-------APGVV------------DEPRIAAVIRAEA-P-D- 36 usage_03959.pdb 1 -------LQLMS--G--S---------------KATKERHEQIAEISRELKTLARELEIP 34 usage_00308.pdb 33 VMGI-----------Y---- 37 usage_01227.pdb 29 PTFVSRYLIAEADE------ 42 usage_02161.pdb 38 LSVS-----------T-IE- 44 usage_02162.pdb 38 LSVS-----------T-IE- 44 usage_02163.pdb 38 LSVS-----------T-IE- 44 usage_02164.pdb 34 VRIG-----------S-IA- 40 usage_02429.pdb 38 EVAV----------IN---- 43 usage_02926.pdb 37 VVV-------------LN-- 41 usage_03959.pdb 35 IIAL-----------V-QLN 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################