################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:42 2021 # Report_file: c_0406_79.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00069.pdb # 2: usage_00070.pdb # 3: usage_00106.pdb # 4: usage_00164.pdb # 5: usage_00209.pdb # 6: usage_00407.pdb # 7: usage_00420.pdb # 8: usage_00425.pdb # 9: usage_00432.pdb # # Length: 110 # Identity: 3/110 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/110 ( 5.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/110 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 ---SQGEISV-G-ESKFFLCQVAGDAK-D--KDISWFSP--N--GEKLSP------NQQR 42 usage_00070.pdb 1 ----QGEISV-G-ESKFFLCQVAGDAK-D--KDISWFSP--N--GEKLSP------NQQR 41 usage_00106.pdb 1 ---SKVELSV-G-ESKFFTCTAIGE---P--ESIDWYNP--Q--GEKIIS------T-QR 39 usage_00164.pdb 1 ---RPVRVVS-G-AEAELKCVVLGEP--P--PVVVWEK---G--GQQLAA------S-ER 39 usage_00209.pdb 1 ---SKVELSV-G-ESKFFTCTAIGE---P--ESIDWYNP--Q--GEKIIS------T-QR 39 usage_00407.pdb 1 -GKVYVAAVR-L-ERVVLTCELCR--P-W--AEVRWTK---D--GEEVVE------S-PA 40 usage_00420.pdb 1 AMAQNITARI-G-EPLVLKCKGAPKK-PPQRLEWKLNT-GRTEAWKVLSPQGGGPWD-SV 55 usage_00425.pdb 1 --TKEVVVNVDDDGVISLNFECDKMTP-K--SEFSWSK---D--YVSTED------S-PR 43 usage_00432.pdb 1 ---TRVRSTP-G-GDLELVVH-LS-GP-G--GPVRWYK---D--GERLAS------Q-GR 38 w usage_00069.pdb 43 ISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQ-- 90 usage_00070.pdb 42 ISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKL 91 usage_00106.pdb 40 VVVQK-EGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ-- 86 usage_00164.pdb 40 LSFPA-DGAEHGLLLTAALPTDAGVYVCRARNAA-GEAYAAAAVTVLEP- 86 usage_00209.pdb 40 VVVQK-EGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ-- 86 usage_00407.pdb 41 LLLQK-EDTVRRLVLPAVQLEDSGEYLCEID-----DESASFTVTVTE-- 82 usage_00420.pdb 56 ARVLP-N---GSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQ-- 99 usage_00425.pdb 44 LEVES-KGNKTKMTFKDLGMDDLGIYSCDVTDT--DGIASSYLID----- 85 usage_00432.pdb 39 VQLEQ-AGARQVLRVQGARSGDAGEYLCDAP-----QDSRIFLVSV---- 78 l D G y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################