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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:15:19 2021
# Report_file: c_0337_19.html
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#====================================
# Aligned_structures: 5
#   1: usage_00009.pdb
#   2: usage_00078.pdb
#   3: usage_00087.pdb
#   4: usage_00088.pdb
#   5: usage_00183.pdb
#
# Length:        127
# Identity:       11/127 (  8.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     41/127 ( 32.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           43/127 ( 33.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00009.pdb         1  --RVDQSPSSLSASVGDRVTITCVLTDT-SYPL-YSTYWYQQKPGSSNKE-QISI----S   51
usage_00078.pdb         1  ELQVIQPDKSVSVAAGESAILHCTVTSLI---PVGPIQWFRGAGPA--RELIYNQKEGHF   55
usage_00087.pdb         1  -AWVDQTPRSVTKETGESLTINCALKNA-ADDL-ERTDWYRTTLGSTNEQ-KISI----G   52
usage_00088.pdb         1  -AWVDQTPRSVTKETGESLTINCALKNA-ADDL-ERTDWYRTTLGSTNEQ-KISI----G   52
usage_00183.pdb         1  --RVDQTPRIATKETGESLTINCVLRDT-ACAL-DSTNWYRTKLGSTKEQ-TISI----G   51
                              VdQ p s     Ges ti C l       l   t Wyr   gs      isi     

usage_00009.pdb        52  GRYSESV-----NKGTKSFTLTISSLQPEDFATYYCRAMGT---------NI-WTGD---   93
usage_00078.pdb        56  PRVTTVSESTKR--ENMDFSISISNITPADAGTYYCVKFRK-----GSPDTE-FKSGAGT  107
usage_00087.pdb        53  GRYVETV-----NKGSKSFSLRIRDLRVEDSGTYKCGAYFSDAMSNYSYPIP-GEKG---  103
usage_00088.pdb        53  GRYVETV-----NKGSKSFSLRIRDLRVEDSGTYKCGAYFS-----------PGEKGAGT   96
usage_00183.pdb        52  GRYSETV-----DEGSNSASLTIRDLRVEDSGTYKCKAIDS---------CW-LRREG--   94
                           gRy e v       g  sfsl I  l  eD gTY C a                      

usage_00009.pdb            -------     
usage_00078.pdb       108  ELSVRAK  114
usage_00087.pdb            -------     
usage_00088.pdb        97  VLTVKAA  103
usage_00183.pdb            -------     
                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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