################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:27 2021 # Report_file: c_0680_158.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00074.pdb # 2: usage_00209.pdb # 3: usage_00803.pdb # 4: usage_01172.pdb # 5: usage_01173.pdb # # Length: 66 # Identity: 3/ 66 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 66 ( 13.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 66 ( 28.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 ----NRIDFSNSTGAEIECKASGNPM-PEIIWIRSDGTAVGDV--PGLRQISSD-----G 48 usage_00209.pdb 1 ----TNLQVEEKGTAVFTCKTEH--PAATVTWRKGLLE-LR-A--SGKHQPSQEG--LTL 48 usage_00803.pdb 1 IKEPKDQIGVSGGVASFVCQATGDPK-PRVTWNKKGKK--V-N--SQRFETIEFDESAGA 54 usage_01172.pdb 1 ----RHITAEMEKVVDIPCRAKGVPP-PSITWYKDAAL-VE-VGKLTRFKQRSD-----G 48 usage_01173.pdb 1 ----RHITAEMEKVVDIPCRAKGVPP-PSITWYKDAAL-VE-VGKLTRFKQRSD-----G 48 C a g p tW k usage_00074.pdb 49 KLVF-- 52 usage_00209.pdb 49 RLTISA 54 usage_00803.pdb 55 VLRIQP 60 usage_01172.pdb 49 GLQISG 54 usage_01173.pdb 49 GLQISG 54 L i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################