################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:09 2021 # Report_file: c_0147_31.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00045.pdb # 2: usage_00046.pdb # 3: usage_00107.pdb # 4: usage_00403.pdb # 5: usage_00568.pdb # 6: usage_00666.pdb # 7: usage_00751.pdb # 8: usage_00752.pdb # # Length: 133 # Identity: 55/133 ( 41.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/133 ( 52.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/133 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 --TLRESGPALVKPTQTLTLTCTFSGFSLSKSVMGVSWIRQPPGKALEWLAHIYWDDDKY 58 usage_00046.pdb 1 --TLKESGPGILKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDDRS 58 usage_00107.pdb 1 --TLKESGPGILKPSQTLSLTCSLSGFSLRTSGMGVGWIRQPSGKGLEWLAHIWWDDDKN 58 usage_00403.pdb 1 -VTLKESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKR 59 usage_00568.pdb 1 -ITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGMGVSWIRQPPGKALEWLAHIYWDDDKR 59 usage_00666.pdb 1 -ITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKR 59 usage_00751.pdb 1 -VQLQESGPGLVKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDGDES 59 usage_00752.pdb 1 QVQLQESGPGLVKPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDGDES 60 L ESGP KP QTL LTC fSGFSl s GV WIRQP GK LEWLAhI wD D usage_00045.pdb 59 YNPSLSARLTISKDTSKNQVVLTMTNMDPVDTATYYCARRGI---------------RSA 103 usage_00046.pdb 59 YNPSLKSQLTISKDAARNQVFLRITSVDTADTATYYCVRRAHT-----------TVLGDW 107 usage_00107.pdb 59 YNPSLKSQLTISKDTSRNQVFLKITSVDTADTATYYCVRRAHN-----------VVLGDW 107 usage_00403.pdb 60 YNPSLESRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGR--------KYEV-NH 110 usage_00568.pdb 60 YNPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARLYG------------FT--YG 105 usage_00666.pdb 60 YSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGPV--NA 117 usage_00751.pdb 60 YNPSLKSRLTISKDTSKNQVSLKITSVTAADTAVYFCARNRY------------DP--PW 105 usage_00752.pdb 61 YNPSLKSRLTISKDTSKNQVSLKITSVTAADTAVYFCARNRY------------DP--PW 106 YnPSL LTI KDts nqV l T DTA Y C r usage_00045.pdb 104 MDYWGQGTTVTVS 116 usage_00046.pdb 108 FAYWGQGTLVTVS 120 usage_00107.pdb 108 FAYWGQGTLVTV- 119 usage_00403.pdb 111 FDYWGQGTTLTVS 123 usage_00568.pdb 106 FAYWGQGTLVTV- 117 usage_00666.pdb 118 MDVWGQGITVTIS 130 usage_00751.pdb 106 FVDWGQGTLVTV- 117 usage_00752.pdb 107 FVDWGQGTLVTVS 119 WGQGt vTv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################