################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:55 2021 # Report_file: c_0569_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00068.pdb # 4: usage_00077.pdb # 5: usage_00129.pdb # 6: usage_00173.pdb # 7: usage_00179.pdb # 8: usage_00180.pdb # # Length: 81 # Identity: 22/ 81 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 81 ( 65.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 81 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 usage_00067.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 usage_00068.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 usage_00077.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 usage_00129.pdb 1 VWKKED-----GAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLV 55 usage_00173.pdb 1 KAEIEQTSSGKERIIVTELPYQVNKAKLIEKIADLVRDKKIEGITDLRDESDRT-GMRIV 59 usage_00179.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 usage_00180.pdb 1 RAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 60 a iE rivvte P QVnkAr iEkIA lvRdKKi gitDLRDE g R V usage_00066.pdb 61 IDVRK-DANASVILNNLYKQT 80 usage_00067.pdb 61 IDVRK-DANASVILNNLYKQ- 79 usage_00068.pdb 61 IDVRK-DANASVILNNLYKQT 80 usage_00077.pdb 61 IDVRK-DANASVILNNLYK-- 78 usage_00129.pdb 56 IVPRSNRVDMDQVMNHLFAT- 75 usage_00173.pdb 60 IEIRR-DANANVILNNLYKQ- 78 usage_00179.pdb 61 IDVRK-DANASVILNNLYKQT 80 usage_00180.pdb 61 IDVRK-DANASVILNNLYK-- 78 I R dana vilNnLyk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################