################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:20 2021 # Report_file: c_0672_67.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00123.pdb # 2: usage_00199.pdb # 3: usage_00200.pdb # 4: usage_00201.pdb # 5: usage_00303.pdb # 6: usage_00408.pdb # 7: usage_00521.pdb # 8: usage_00828.pdb # # Length: 74 # Identity: 4/ 74 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 74 ( 9.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 74 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 TYQ-----------------LVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWLN 42 usage_00199.pdb 1 ---IKKVWTFGRNPACDYHLGN----ISRLSNKHFQILLGED-GNLLLNDI-STNGTWLN 51 usage_00200.pdb 1 ------------------IVLD----SANVSRHHAVIVDT-G-TNYVINDLRSSNGVHVQ 36 usage_00201.pdb 1 ----------------DYHLGN----ISRLSNKHFQILLGED-GNLLLNDI-STNGTWLN 38 usage_00303.pdb 1 -----------------EIAIK----DAGISTKHLRIESD-S-GNWVIQDLGSSNGTLLN 37 usage_00408.pdb 1 -----------------DYVLE----HPSISSVHAVLVFHGGQRCFVLMDLGSTNGVKLN 39 usage_00521.pdb 1 ----------------DYHLGN----ISRLSNKHFQILLGED-GNLLLNDI-STNGTWLN 38 usage_00828.pdb 1 -----------------DIRIQ----LPVVSKQHCKIEIH-E-QEAILHNFSSTNPTQVN 37 S H d S Ng n usage_00123.pdb 43 RARLEPLRVYS--- 53 usage_00199.pdb 52 GQKVEKNSNQL--- 62 usage_00200.pdb 37 HERIRS-AV----T 45 usage_00201.pdb 39 GQKVEKNSNQL--- 49 usage_00303.pdb 38 SNALDPETSVN--- 48 usage_00408.pdb 40 GNRIEKRRPLPAP- 52 usage_00521.pdb 39 GQKVEKNSNQL--- 49 usage_00828.pdb 38 GSVIDE-PV----R 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################