################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:37 2021 # Report_file: c_0108_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00020.pdb # 6: usage_00027.pdb # 7: usage_00028.pdb # 8: usage_00037.pdb # 9: usage_00038.pdb # # Length: 214 # Identity: 147/214 ( 68.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 187/214 ( 87.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/214 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 usage_00008.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 usage_00009.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 usage_00010.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 usage_00020.pdb 1 -------------LDEVVAIQKPFIAKHGVTPGDFIAFAGAVGVSNCPGAPQMQFFLGRP 47 usage_00027.pdb 1 FDTIETAFHPNIGLDEVVAMQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRK 60 usage_00028.pdb 1 -------------LDEVVAMQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRK 47 usage_00037.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 usage_00038.pdb 1 FDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSNCPGAPQMNFFTGRA 60 LDE V QKPFvqKHGVTPGDFIAFAGAValSNCPGAPQMnFFtGR usage_00007.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELV-MLSAHSVAAVNDVDPTVQGLPF 119 usage_00008.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELV-MLSAHSVAAVNDVDPTVQGLPF 119 usage_00009.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVFMLSAHSVAAVNDVDPTVQGLPF 120 usage_00010.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVFMLSAHSVAAVNDVDPTVQGLPF 120 usage_00020.pdb 48 EATQAAPDGLVPEPFHTIDQVLARMLDAGGFDEIETV-LLSAHSIAAANDVDPTISGLPF 106 usage_00027.pdb 61 PATQPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPF 120 usage_00028.pdb 48 PATQPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPF 107 usage_00037.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPF 120 usage_00038.pdb 61 PATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPF 120 pATQpAPDGLVPEPFHTvDQii RvnDAGeFDElElV mLSAHSvAAvNDVDPTvqGLPF usage_00007.pdb 120 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 179 usage_00008.pdb 120 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 179 usage_00009.pdb 121 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 180 usage_00010.pdb 121 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 180 usage_00020.pdb 107 DSTPGQFDSQFFVETQLRGTAFPGKTGIQGTVMSPLKGEMRLQTDHLFARDSRTACEWQS 166 usage_00027.pdb 121 DSTPGIFDSQFFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHTLARDSRTACEWQS 180 usage_00028.pdb 108 DSTPGIFDSQFFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHTLARDSRTACEWQS 167 usage_00037.pdb 121 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 180 usage_00038.pdb 121 DSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHTIARDSRTACEWQS 180 DSTPGiFDSQFFVETQ RGT FPGsgGnQGeVeS GEiRiQ DHt ARDSRTACEWQS usage_00007.pdb 180 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 213 usage_00008.pdb 180 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 213 usage_00009.pdb 181 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 214 usage_00010.pdb 181 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 214 usage_00020.pdb 167 FVNNQTKLQEDFQFIFTALSTLGHDMNAMIDCSE 200 usage_00027.pdb 181 FVGNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 214 usage_00028.pdb 168 FVGNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 201 usage_00037.pdb 181 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 214 usage_00038.pdb 181 FVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSD 214 FV NQsKLvdDFQFIFlALtqLGqDpNAMtDCSd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################