################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:51 2021 # Report_file: c_1172_267.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00351.pdb # 4: usage_00438.pdb # 5: usage_01197.pdb # 6: usage_01237.pdb # 7: usage_01238.pdb # 8: usage_02080.pdb # 9: usage_02695.pdb # # Length: 50 # Identity: 2/ 50 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 50 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 50 ( 62.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTELFLP 37 usage_00013.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTELFLP 37 usage_00351.pdb 1 -------ELAVGF-DAGGRESFRFGGAACAVG--------GGGHLLWTLP 34 usage_00438.pdb 1 DV----VTFGQTGGAA--------G--TNATITITAPTVT-LTILA--TT 33 usage_01197.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTEL--- 34 usage_01237.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTELFLP 37 usage_01238.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTELFLP 37 usage_02080.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTELFLP 37 usage_02695.pdb 1 --TLTRDFIEIGR-DA--------GLWGRRSRLRLS-GKP-LLLTEL--- 34 g dA G l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################