################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:08 2021 # Report_file: c_1369_70.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00050.pdb # 2: usage_00119.pdb # 3: usage_00218.pdb # 4: usage_00430.pdb # 5: usage_00645.pdb # 6: usage_01208.pdb # 7: usage_01335.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 57 ( 10.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 57 ( 73.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 --ARTMEI---------------HHTKHHQTYVDNANKALEGTEFAD-LPVEQLIQQ 39 usage_00119.pdb 1 ---------------------------HHQTYVTNLNNLIKGTAFEG-KSLEEIIRS 29 usage_00218.pdb 1 -DARTMEI---------------HHTKHHQTYVDNANKALEGTEFAD-LPVEQLIQQ 40 usage_00430.pdb 1 -SKQQVTL---------------HYDKHHQGYVTKLNAAAQTNSALATKSIEEIIR- 40 usage_00645.pdb 1 NINDLKLTLSKAGQEHLLRFWNEL---EEAQQVELYAELQAM--------------- 39 usage_01208.pdb 1 --ARTMEI---------------HHTKHHQTYVDNANKALETEFAD--LPVEQLIQQ 38 usage_01335.pdb 1 --KQTMEI---------------HHTKHHQTYVNNANAALESLPEFANLPVEELITK 40 hhq yV n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################