################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:43 2021 # Report_file: c_1452_391.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01784.pdb # 2: usage_02816.pdb # 3: usage_04136.pdb # 4: usage_04137.pdb # 5: usage_04983.pdb # 6: usage_05531.pdb # 7: usage_05532.pdb # # Length: 23 # Identity: 0/ 23 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 23 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 23 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01784.pdb 1 --LKYDNVRGIIF-----GEKS- 15 usage_02816.pdb 1 -PLVVYFHGGGFI-----LFSAA 17 usage_04136.pdb 1 RPVLVYIHGGGFI-----IGENH 18 usage_04137.pdb 1 RPVLVYIHGGGFI-----IGENH 18 usage_04983.pdb 1 -PVQETLHGSQPVTQEDG----- 17 usage_05531.pdb 1 -PVLVYIHGGGFI-----IGENH 17 usage_05532.pdb 1 RPVLVYIHGGGFI-----IGENH 18 hgg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################