################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:57 2021 # Report_file: c_0828_3.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00030.pdb # 2: usage_00183.pdb # 3: usage_00199.pdb # 4: usage_00284.pdb # 5: usage_00285.pdb # 6: usage_00367.pdb # 7: usage_00379.pdb # 8: usage_00398.pdb # 9: usage_00451.pdb # 10: usage_00452.pdb # 11: usage_00462.pdb # 12: usage_00484.pdb # 13: usage_00485.pdb # # Length: 80 # Identity: 46/ 80 ( 57.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 80 ( 57.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 80 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00183.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00199.pdb 1 LQKILGVQKKLPIIQKIVILDSREDYMGKQSMYSFIESHLPAGFNEYDYIPDSFDRETAT 60 usage_00284.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00285.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00367.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00379.pdb 1 LQKILGVQKKLPIIQKIVILDSREDYMGKQSMYSFIESHLPAGFNEYDYIPDSFDRETAT 60 usage_00398.pdb 1 ------VQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 54 usage_00451.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00452.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00462.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00484.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 usage_00485.pdb 1 LQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTI 60 VQKKLPIIQKI I DS DY G QSMY F SHLP GFNEYD P SFDR usage_00030.pdb 61 ALIMNS-STGLP--KGVALP 77 usage_00183.pdb 61 ALIMNS-LPK-----GVALP 74 usage_00199.pdb 61 ALIMNS-LPK-----GVELT 74 usage_00284.pdb 61 ALIMNS-SGSTGLPKGVALP 79 usage_00285.pdb 61 ALIMNSGLPK-----GVALP 75 usage_00367.pdb 61 ALIMNS-LPK-----GVALP 74 usage_00379.pdb 61 ALIMNS--PK-----GVELT 73 usage_00398.pdb 55 ALIMNS-LPK-----GVALP 68 usage_00451.pdb 61 ALIMNSSLPK-----GVALP 75 usage_00452.pdb 61 ALIMNS-LPK-----GVALP 74 usage_00462.pdb 61 ALIMNS-LPK-----GVALP 74 usage_00484.pdb 61 ALIMNS-LPK-----GVALP 74 usage_00485.pdb 61 ALIMNS-SPK-----GVALP 74 ALIMNS GV L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################