################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:55 2021 # Report_file: c_1385_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00183.pdb # 2: usage_00184.pdb # 3: usage_00185.pdb # 4: usage_00186.pdb # 5: usage_00188.pdb # 6: usage_00917.pdb # # Length: 37 # Identity: 32/ 37 ( 86.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 37 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 37 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00183.pdb 1 -RGEFISVGGNGR-SHKEAILLGLRYKKLYNQARVK- 34 usage_00184.pdb 1 --GEFISVGGNGR-SHKEAILLGLRYKKLYNQARVK- 33 usage_00185.pdb 1 -RGEFISVGGNGR-SHKEAILLGLRYKKLYNQARVKY 35 usage_00186.pdb 1 -RGEFISVGGNGR-SHKEAILLGLRYKKLYNQARVKY 35 usage_00188.pdb 1 -RGEFISVGGNGRMSHKEAILLGLRYKKLYNQARVK- 35 usage_00917.pdb 1 SRGEFISVGGDGRMSHKEAILLGLRYKKLYNQARVKY 37 GEFISVGGnGR SHKEAILLGLRYKKLYNQARVK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################