################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:22 2021 # Report_file: c_1260_190.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00358.pdb # 2: usage_00516.pdb # 3: usage_00653.pdb # 4: usage_00659.pdb # 5: usage_00868.pdb # 6: usage_01085.pdb # 7: usage_01086.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 46 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 46 ( 69.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00358.pdb 1 ---GVGID--ALGIERAQEG--HPTHKTLFS--AGV-IIIE---G- 32 usage_00516.pdb 1 VAV-IDARS-S---I------SAAAAQA---VADGVQVISG----- 27 usage_00653.pdb 1 -QLALLSV-SE---K-AG--LVEFARSL---NALGLGLIASG---- 31 usage_00659.pdb 1 GVYVLTSH--Q---TATA--AEEFAYLQ---SLSRA-TIIG----- 30 usage_00868.pdb 1 -STVYVLTTNA---TRGA--AE-VINCL---NPYKV------VLIG 30 usage_01085.pdb 1 PLAVLVSK--S---SAAA--AEIVAQTL---QDYGVALIVG----- 31 usage_01086.pdb 1 PLAVLVSK--S---SAAA--AEIVAQTL---QDYGVALIVG----- 31 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################