################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:09:41 2021 # Report_file: c_0639_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00001.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00032.pdb # 9: usage_00033.pdb # 10: usage_00049.pdb # 11: usage_00070.pdb # 12: usage_00071.pdb # 13: usage_00078.pdb # 14: usage_00079.pdb # # Length: 160 # Identity: 26/160 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/160 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/160 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---GFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQ---RVQFGKPLCKFQSISFK 54 usage_00013.pdb 1 ---GFAQMMKGLEVGRLQVAARATGVARAAFEDALRYSQE---RESFGKPIWQHQSVGNM 54 usage_00014.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00015.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00016.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00017.pdb 1 RGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 57 usage_00018.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00032.pdb 1 ---GLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEE---REQFGKKLKEHQAIAFK 54 usage_00033.pdb 1 ---GLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEE---REQFGKKLKEHQAIAFK 54 usage_00049.pdb 1 LKRGFAALMSAYNAQRVGAGAVALGIAQCAFEEGVAYLKR---REQFGRPLAEFQGLQWM 57 usage_00070.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00071.pdb 1 ---GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKG---REAFGRPIAEFEGVSFK 54 usage_00078.pdb 1 ---GLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANEKII----------DHGLGFL 47 usage_00079.pdb 1 EGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANE---RTAFGRKIIDHQGLGFL 57 G l gR g aA A G A a Y usage_00001.pdb 55 LADMKMQIEAARNLVYKAACKKQ---EGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGY 111 usage_00013.pdb 55 LADMGTKLYAARSLLLSAAEKFD---AGQRCDMEAGMAKLFASETAMQIALDAVRVHGGY 111 usage_00014.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00015.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00016.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00017.pdb 58 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 114 usage_00018.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00032.pdb 55 IADMHVKIAAARALVLEAARKKD---RGERFTLEASAAKLFASAAAVEVTREAVQVLGGY 111 usage_00033.pdb 55 IADMHVKIAAARALVLEAARKKD---RGERFTLEASAAKLFASAAAVEVTREAVQVLGGY 111 usage_00049.pdb 58 VADMSVQLEAARLMLRSAAVSGETFP----DINKAAQAKIFAAETANKVTNDALQFFGSS 113 usage_00070.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00071.pdb 55 LAEAATELEAARLLYLKAAELKD---AGRPFTLEAAQAKLFASEAAVKACDEAIQILGGY 111 usage_00078.pdb 48 LADMAAAVATARATYLDAARRRD---QGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGV 104 usage_00079.pdb 58 LADMAAAVATARATYLDAARRRD---QGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGV 114 A AR AA A AK A A A q Gg usage_00001.pdb 112 GYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR-- 149 usage_00013.pdb 112 GYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAKQLVAR- 150 usage_00014.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00015.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00016.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00017.pdb 115 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 154 usage_00018.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00032.pdb 112 GYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR-- 149 usage_00033.pdb 112 GYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR-- 149 usage_00049.pdb 114 GYGRHNPMERHVRDARMFTIAGGTAQILRTQVASKI---- 149 usage_00070.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00071.pdb 112 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEAV 151 usage_00078.pdb 105 GYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLT--- 141 usage_00079.pdb 115 GYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLT--- 151 GY y veR R A i eGT i v a l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################