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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:01:51 2021
# Report_file: c_0120_3.html
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#====================================
# Aligned_structures: 9
#   1: usage_00029.pdb
#   2: usage_00051.pdb
#   3: usage_00052.pdb
#   4: usage_00056.pdb
#   5: usage_00060.pdb
#   6: usage_00061.pdb
#   7: usage_00081.pdb
#   8: usage_00099.pdb
#   9: usage_00102.pdb
#
# Length:        113
# Identity:       79/113 ( 69.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     81/113 ( 71.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            5/113 (  4.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00029.pdb         1  -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
usage_00051.pdb         1  -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
usage_00052.pdb         1  -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
usage_00056.pdb         1  AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   60
usage_00060.pdb         1  -AVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIP   59
usage_00061.pdb         1  -AVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIP   59
usage_00081.pdb         1  -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
usage_00099.pdb         1  -AVTQSPRNKVAVTGGKVTLSCDQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
usage_00102.pdb         1  -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP   59
                            AVTQSPR KVAVTGgKVTLSC QTNNH  MYWYRQDTGHGLRLIHYSY A STEKGDIP

usage_00029.pdb        60  DGYKASRPSQENFSLILELATPSQTSVYFCASGGGGTLYFGA--GTRLSVL--  108
usage_00051.pdb        60  DGYKASRPSQENFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVL-E  111
usage_00052.pdb        60  DGYKASRPSQENFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVL--  110
usage_00056.pdb        61  DGYKASRPSQENFSLILELATPSQTSVYFCASGGGGTLYFGA--GTRLSVL-E  110
usage_00060.pdb        60  DGYKASRPSQENFSLILELASLSQTAVYFCASSWDRAGNTLYFGEGSRLIVVE  112
usage_00061.pdb        60  DGYKASRPSQENFSLILELASLSQTAVYFCASSWDRAGNTLYFGEGSRLIVVE  112
usage_00081.pdb        60  DGYKASRPSQENFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVL--  110
usage_00099.pdb        60  DGYKASRPSQEDFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVL-E  111
usage_00102.pdb        60  DGYKASRPSQEQFSLILESATPSQTSVYFCASGGGGTLYFGA--GTRLSVL--  108
                           DGYKASRPSQE FSLILElA  SQT VYFCAS                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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