################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:26 2021 # Report_file: c_0668_47.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00024.pdb # 2: usage_00045.pdb # 3: usage_00122.pdb # 4: usage_00478.pdb # 5: usage_00524.pdb # # Length: 65 # Identity: 5/ 65 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 65 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 65 ( 76.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 ---------------------AALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGR 39 usage_00045.pdb 1 IKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIR------------------- 41 usage_00122.pdb 1 --------------------------KVQVDPFMGQVAYLRLYRGRLKPGDSLQS--EAG 32 usage_00478.pdb 1 -------------------PFSALAFKIATDPFVGTLTYFRAYSGILKSGDTVYNSVKGK 41 usage_00524.pdb 1 -------------------------FKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGR 35 Ki DP vG lt R usage_00024.pdb 40 KERVA 44 usage_00045.pdb ----- usage_00122.pdb 33 QVRLP 37 usage_00478.pdb 42 KERIG 46 usage_00524.pdb 36 KERVA 40 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################