################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:29 2021 # Report_file: c_0680_37.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00361.pdb # 2: usage_00846.pdb # 3: usage_01013.pdb # 4: usage_01323.pdb # 5: usage_01372.pdb # # Length: 85 # Identity: 76/ 85 ( 89.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 85 ( 89.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 85 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00361.pdb 1 NVWLEFSIKIKDLPKGALLNLQIYCVRLLYYVNLLLIDHRFLLRRGEYVLHMWQI----F 56 usage_00846.pdb 1 -VWLEFSIKIKDLPKGALLNLQIYC-RLLYYVNLLLIDHRFLLRRGEYVLHMWQI--SGF 56 usage_01013.pdb 1 -VWLEFSIKIKDLPKGALLNLQIYC-QLLYYVNLLLIDHRFLLRRGEYVLHMWQISF--- 55 usage_01323.pdb 1 -VWLEFSIKIKDLPKGALLNLQIYC--LLYYVNLLLIDHRFLLRRGEYVLHMWQI--SGF 55 usage_01372.pdb 1 -VWLEFSIKIKDLPKGALLNLQIYCVRLLYYVNLLLIDHRFLLRRGEYVLHMWQI--SG- 56 VWLEFSIKIKDLPKGALLNLQIYC LLYYVNLLLIDHRFLLRRGEYVLHMWQI usage_00361.pdb 57 NADKLTSATNPDKENSMSISILLDN 81 usage_00846.pdb 57 NADKLTSATNPDKENSMSISILLDN 81 usage_01013.pdb 56 NADKLTSATNPDKENSMSISILLD- 79 usage_01323.pdb 56 NADKLTSATNPDKENSMSISILLDN 80 usage_01372.pdb 57 NADKLTSATNPDKENSMSISILLD- 80 NADKLTSATNPDKENSMSISILLD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################