################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:50 2021 # Report_file: c_0944_23.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00016.pdb # 2: usage_00046.pdb # 3: usage_00063.pdb # 4: usage_00118.pdb # 5: usage_00138.pdb # 6: usage_00139.pdb # 7: usage_00140.pdb # 8: usage_00141.pdb # 9: usage_00170.pdb # 10: usage_00219.pdb # 11: usage_00220.pdb # 12: usage_00221.pdb # 13: usage_00222.pdb # # Length: 64 # Identity: 5/ 64 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 64 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 64 ( 29.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -SIQWFHN-GN---LIPTHTQPSYRFK-ANNNDSGEYTCQTG--QTSLSDPVHLTVLF-- 50 usage_00046.pdb 1 -STQWFHN-ES---LIS-SQASSYFIDAATVDDSGEYRCQTQ--LSTLSDPVQLEVH--- 49 usage_00063.pdb 1 -QIKWRKLDGSQTSKWL-SSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 58 usage_00118.pdb 1 --TKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLEV---- 47 usage_00138.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00139.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00140.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00141.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00170.pdb 1 NSTQWFHN-ES---LIS-SQASSYFIDAATVNDSGEYRCQTN--LSTLSDPVQLEVH--- 50 usage_00219.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00220.pdb 1 -STKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLE----- 47 usage_00221.pdb 1 --TKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLEVFS-- 49 usage_00222.pdb 1 --TKWFHN-GS---LSE-ETNSSLNIVNAKFEDSGEYKCQHQ--QVNESEPVYLEVFS-- 49 Wfhn s l s i a DsGeY Cq s pv l usage_00016.pdb ---- usage_00046.pdb ---- usage_00063.pdb 59 DWLD 62 usage_00118.pdb ---- usage_00138.pdb ---- usage_00139.pdb ---- usage_00140.pdb ---- usage_00141.pdb ---- usage_00170.pdb ---- usage_00219.pdb ---- usage_00220.pdb ---- usage_00221.pdb ---- usage_00222.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################