################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:51 2021 # Report_file: c_1200_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00166.pdb # 2: usage_00487.pdb # 3: usage_00488.pdb # 4: usage_00489.pdb # 5: usage_00490.pdb # 6: usage_00491.pdb # 7: usage_00954.pdb # 8: usage_00955.pdb # 9: usage_01002.pdb # 10: usage_01404.pdb # 11: usage_01435.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 35 ( 8.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 35 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 ---LVRR-IISTAKAPAAIGPYSQAVLVDRTIYIS 31 usage_00487.pdb 1 ---LIRR-VISTAKAPGAIGPYSQAVLVDRTIYIS 31 usage_00488.pdb 1 ---LIRR-VISTAKAPGAIGPYSQAVLVDRTIYIS 31 usage_00489.pdb 1 -SSLIRR-VISTAKAPGAIGPYSQAVLVDRTIYIS 33 usage_00490.pdb 1 ---LIRR-VISTAKAPGAIGPYSQAVLVDRTIYIS 31 usage_00491.pdb 1 ---LIRR-VISTAKAPGAIGPYSQAVLVDRTIYIS 31 usage_00954.pdb 1 ---IIRK-VISTSKAPAAIGAYSQAVLVDRTIYVS 31 usage_00955.pdb 1 ---IIRK-VISTSKAPAAIGAYSQAVLVDRTIYVS 31 usage_01002.pdb 1 ----MKE-VIFTENAPKPIGPYSQAIKAGNFLFIA 30 usage_01404.pdb 1 ---FFGVPINTREVFGV---LHVKGFVFDDTVLYS 29 usage_01435.pdb 1 G--HPKS-VIIPAGSSAPLAPFVPGTLADGVVYVS 32 i d s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################