################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:10 2021 # Report_file: c_1428_51.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00729.pdb # 2: usage_01552.pdb # 3: usage_01553.pdb # 4: usage_01554.pdb # 5: usage_01555.pdb # # Length: 51 # Identity: 2/ 51 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 51 ( 54.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 51 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00729.pdb 1 -EPEKYIQAW--------LPVHQIYQGNCEGG--------DLETVVQKYYH 34 usage_01552.pdb 1 MNQQLIETL-KSKEGKMIEIRRYLHQH-----PELSFHEDETAKYIAEFYK 45 usage_01553.pdb 1 MNQQLIETL-KSKEGKMIEIRRYLHQH-----PELSFHEDETAKYIAEFYK 45 usage_01554.pdb 1 -NQQLIETL-KSKEGKMIEIRRYLHQH-----PELSFHEDETAKYIAEFYK 44 usage_01555.pdb 1 -NQQLIETL-KSKEGKMIEIRRYLHQH-----PELSFHEDETAKYIAEFYK 44 nqqlietl eirrylhQh etakyiaefYk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################