################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:02:25 2021 # Report_file: c_1331_30.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00001.pdb # 2: usage_00129.pdb # 3: usage_00130.pdb # 4: usage_00334.pdb # 5: usage_00335.pdb # 6: usage_00363.pdb # 7: usage_00367.pdb # 8: usage_00368.pdb # 9: usage_00401.pdb # 10: usage_00402.pdb # 11: usage_00403.pdb # 12: usage_00404.pdb # 13: usage_00405.pdb # 14: usage_00412.pdb # 15: usage_00413.pdb # 16: usage_00414.pdb # 17: usage_00427.pdb # 18: usage_00428.pdb # 19: usage_00429.pdb # 20: usage_00430.pdb # 21: usage_00431.pdb # 22: usage_00432.pdb # 23: usage_00481.pdb # 24: usage_00505.pdb # 25: usage_00506.pdb # 26: usage_00507.pdb # 27: usage_00508.pdb # 28: usage_00575.pdb # 29: usage_00576.pdb # # Length: 57 # Identity: 13/ 57 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 57 ( 63.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 57 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SGEAYD---IIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIA-------- 46 usage_00129.pdb 1 ------VDVVASNGQDSRIRFAGEHT-IDGAGCAYGAWESGRREATRISDLLKLEHH 50 usage_00130.pdb 1 ------VDVVASNGQDSRIRFAGEHT-IDGAGCAYGAWESGRREATRISDLLKLE-- 48 usage_00334.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLL----- 48 usage_00335.pdb 1 --DMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDL------ 46 usage_00363.pdb 1 --DMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLL----- 47 usage_00367.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK---- 49 usage_00368.pdb 1 --DMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL--- 49 usage_00401.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK---- 50 usage_00402.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEH- 52 usage_00403.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEHH 53 usage_00404.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEH- 53 usage_00405.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL--- 50 usage_00412.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEH- 53 usage_00413.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 51 usage_00414.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEHH 54 usage_00427.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEH- 52 usage_00428.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 51 usage_00429.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK---- 49 usage_00430.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK---- 49 usage_00431.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK---- 49 usage_00432.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLL----- 48 usage_00481.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLL----- 49 usage_00505.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 52 usage_00506.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 52 usage_00507.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL--- 51 usage_00508.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 52 usage_00575.pdb 1 -VDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE-- 51 usage_00576.pdb 1 PVDMVV---AMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEHH 54 sngqdsrirFAGEhT dgagcayGAweSGrREAtrIs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################