################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:31 2021 # Report_file: c_0183_3.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00019.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00028.pdb # 7: usage_00029.pdb # 8: usage_00035.pdb # 9: usage_00036.pdb # 10: usage_00040.pdb # 11: usage_00049.pdb # 12: usage_00050.pdb # # Length: 156 # Identity: 17/156 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/156 ( 27.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/156 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 GLSYLPQEASVFRKLSVEENIRAVLELQVGDDGKR-LSKDAIASRTEALLDELQISHLRE 59 usage_00003.pdb 1 -LSYLPQEASVFRKLSVEENIRAVLELQVG-G-KR-LSKDAIASRTEALLDELQISHLRE 56 usage_00019.pdb 1 -ISYLPEEAGAYRNMQGIEYLRFVAGFY------A-SSSSEIEEMVERATEIAGLGEKIK 52 usage_00026.pdb 1 GIGYLPQEASIFRRLSVYDNL-AVLQIR------DDLSAEQREDRANEL-EEFHIEHLRD 52 usage_00027.pdb 1 GIGYLPQEASIFRRLSVYDNL-AVLQIR------DDLSAEQREDRANEL-EEFHIEHLRD 52 usage_00028.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 usage_00029.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 usage_00035.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 usage_00036.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 usage_00040.pdb 1 --AYIPETPVLYEELTLEEHLRLAAMAY------G-LSEAEYERRLPPLLREFRLERRLS 51 usage_00049.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 usage_00050.pdb 1 GIGYLPQEASIFRRLSVYDNLMAVLQIR------DDLSAEQREDRANELMEEFHIEHLRD 54 YlP ea r l v lS r l e usage_00002.pdb 60 NPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQRNIGVLI 119 usage_00003.pdb 57 NPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQRNIGVLI 116 usage_00019.pdb 53 DRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILV 112 usage_00026.pdb 53 S-GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 111 usage_00027.pdb 53 S-GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 111 usage_00028.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 usage_00029.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 usage_00035.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 usage_00036.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 usage_00040.pdb 52 SFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQKAKGAGILL 111 usage_00049.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 usage_00050.pdb 55 SMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLI 114 S G r v IarAl nP lD Pf G Dp i g L usage_00002.pdb 120 TDHNVRETLGICDHAYIISDGSVLAAGAPGDIIEN- 154 usage_00003.pdb 117 TDHNVRETLGICDHAYIISDGSVLAAGAPGDIIEN- 151 usage_00019.pdb 113 SSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER- 147 usage_00026.pdb 112 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 146 usage_00027.pdb 112 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 146 usage_00028.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 usage_00029.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 usage_00035.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 usage_00036.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 usage_00040.pdb 112 STHILATAERYCDSFVILHNGRVKAKGTLDDIRRQF 147 usage_00049.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 usage_00050.pdb 115 TDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD- 149 Hn e C i G a G i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################