################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:22 2021 # Report_file: c_1135_45.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00704.pdb # 2: usage_00770.pdb # 3: usage_00771.pdb # 4: usage_00883.pdb # 5: usage_00884.pdb # # Length: 205 # Identity: 39/205 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/205 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/205 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00704.pdb 1 --QKHLQINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESLRIQAQFAQLGQLNPQE 58 usage_00770.pdb 1 MLDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNR-E------------ 47 usage_00771.pdb 1 MLDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNR-E------------ 47 usage_00883.pdb 1 --EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLK---------------- 42 usage_00884.pdb 1 --EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGD------------ 46 Kq l v v E K e lQd df ktl usage_00704.pdb 59 RMSRETALQQK-QV-------SLETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIIL 110 usage_00770.pdb 48 ---------------AKSDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALI 92 usage_00771.pdb 48 --------------H---DQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALI 90 usage_00883.pdb 43 -----------------------MQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLT 79 usage_00884.pdb 47 -----------VTR-------QKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLT 88 L m Ld R v lL e Q l usage_00704.pdb 111 DDELIQWKRRQQLAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAEHLCQQLPIPG- 169 usage_00770.pdb 93 NDELVEWKRRQQSACIGGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHD 152 usage_00771.pdb 91 NDELVEWKRRQQSACIGGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHD 150 usage_00883.pdb 80 DEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGD 139 usage_00884.pdb 89 DEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGD 148 EL WKRRQQ AciGGPPn cLD L nW t AEs Q RQQ kklEeL Qk y usage_00704.pdb 170 PVEEMLAEVNATITDIISALVTSTF 194 usage_00770.pdb 153 PITKNKQVLWDRTFSLFQQLIQSSF 177 usage_00771.pdb 151 PITKNKQVLWDRTFSLFQQLIQSSF 175 usage_00883.pdb 140 PIVQHRPMLEERIVELFRNLMKSAF 164 usage_00884.pdb 149 PIVQHRPMLEERIVELFRNLMKSAF 173 Pi l r lf L S F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################