################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:51 2021 # Report_file: c_1240_103.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00341.pdb # 2: usage_00343.pdb # 3: usage_00345.pdb # 4: usage_00347.pdb # 5: usage_00349.pdb # 6: usage_00351.pdb # 7: usage_00816.pdb # 8: usage_00818.pdb # 9: usage_00820.pdb # 10: usage_00822.pdb # 11: usage_00823.pdb # 12: usage_01277.pdb # 13: usage_01683.pdb # 14: usage_01891.pdb # 15: usage_01893.pdb # 16: usage_01895.pdb # 17: usage_01897.pdb # 18: usage_01899.pdb # 19: usage_01901.pdb # # Length: 47 # Identity: 6/ 47 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 47 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 47 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00341.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_00343.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_00345.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_00347.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_00349.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQKN 47 usage_00351.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_00816.pdb 1 --CELITNISIPDDKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKN 45 usage_00818.pdb 1 --CELITNISIPDDKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKN 45 usage_00820.pdb 1 --CELITNISIPDDKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKN 45 usage_00822.pdb 1 PCCEVITNVNLPDDNVQSTLSQIENAISDVMGKPLGYIMSNYDYQKN 47 usage_00823.pdb 1 --CEVITNVNLPDDNVQSTLSQIENAISDVMGKGYIMSNYDYQK--- 42 usage_01277.pdb 1 PCCEVITNVNLPDDNVQSTLSQIENAISDV--KPLGYIMSNYDYQKN 45 usage_01683.pdb 1 PKCMIFCPVAATPAQQDALLKDAEKAVADALGKPLSYVMVGYSQTG- 46 usage_01891.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_01893.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_01895.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 usage_01897.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQKN 47 usage_01899.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQKN 47 usage_01901.pdb 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQK- 46 Ce itn pdd q Ls iE Ais Kp y m Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################