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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:33:04 2021
# Report_file: c_0615_5.html
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#====================================
# Aligned_structures: 11
#   1: usage_00014.pdb
#   2: usage_00034.pdb
#   3: usage_00049.pdb
#   4: usage_00073.pdb
#   5: usage_00074.pdb
#   6: usage_00086.pdb
#   7: usage_00106.pdb
#   8: usage_00107.pdb
#   9: usage_00108.pdb
#  10: usage_00109.pdb
#  11: usage_00178.pdb
#
# Length:        146
# Identity:        6/146 (  4.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/146 (  7.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           81/146 ( 55.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00014.pdb         1  --------------------------M---IPA-KKGSIVFTASISSFTAG--EGVS-HV   27
usage_00034.pdb         1  --------------APWQC----AQEVVQHIKAERKGSIINITSILSQSTN--LG-V-SP   38
usage_00049.pdb         1  -----------------------APHM---AEA-GWGRVLFIGSVTTFTAGGPVP-I-PA   31
usage_00073.pdb         1  -----------------------MRAM---MKK-RHGRIITIGSV------------VAN   21
usage_00074.pdb         1  -----------------------MRAM---MKK-RHGRIITIGSV------------V--   19
usage_00086.pdb         1  TEEKFEKVINANLTGAFRVAQRASRSM---QRN-KFGRMIFIGSVSGLWGI--GN-Q-AN   52
usage_00106.pdb         1  -----------------LCTQAVAPHM---IAA-KYGRILNASSVVGLYGN--FG-Q-TN   35
usage_00107.pdb         1  AEAQFDAVISVNLKGVFLCTQAVAPHM---IAA-KYGRILNASSVVGLYGN--FG-Q-TN   52
usage_00108.pdb         1  -----------------LCTQAVAPHM---IAA-KYGRILNASSVVGLYGN--FG-Q-TN   35
usage_00109.pdb         1  -----------------LCTQAVAPHM---IAA-KYGRILNASSVVGLYGN--FG-Q-TN   35
usage_00178.pdb         1  -----------------------FPYM---KKQ-NYGRIIMTSSNSGIYGN--FG-Q-VN   29
                                                     m         G      S                

usage_00014.pdb        28  YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYI--VASPLLTDVFG---V--DSSRVEEL   80
usage_00034.pdb        39  YCASKAGLRHLTEV-AVELARFGINVNAIAPGY---ITEI------NEEYLT--SEVGQQ   86
usage_00049.pdb        32  YTTAKTALLGLTRALAKEWARLGIRVNLLCPGY--VETEF------TLPLRQ-NPELYEP   82
usage_00073.pdb        22  YAAAKAGLIGFSKSLAREVASRGITVNVVAPGF--IET----------AL---SDDQRAG   66
usage_00074.pdb        20  -AAAKAGLIGFSKSLAREVASRGITVNVVAPGF--IETDM------TRAL---SDDQRAG   67
usage_00086.pdb        53  YAASKAGVIGMARSIARELSKANVTANVVAPGY--IDTDM------TRAL---DERIQQG  101
usage_00106.pdb        36  YVAAKSGVIGMTKVWARELGRYGITVNAIAPGF--IATEM------VQQM---PERVLEA   84
usage_00107.pdb        53  YVAAKSGVIGMTKVWARELGRYGITVNAIAPGF--IATEM------VQQM---PERVLEA  101
usage_00108.pdb        36  YVAAKSGVIGMTKVWARELGRYGITVNAIAPGF--IATEM------VQQM---PERVLEA   84
usage_00109.pdb        36  YVAAKSGVIGMTKVWARELGRYGITVNAIAPGF--IATEM------VQQM---PERVLEA   84
usage_00178.pdb        30  YTAAKMGLIGLANTVAIEGARNNVLCNVIV-PTEG-------------IL---PDILFNE   72
                             a K    g     a E        N                                 

usage_00014.pdb        81  AHQAANLKGTLLRAEDVADAVAYL--  104
usage_00034.pdb        87  LLKKIP-TRKFVEFDDLNGPLLLLA-  110
usage_00049.pdb        83  ITARIP-MGRWARPEEIARVAAVLCG  107
usage_00073.pdb        67  ILAQVP-AGRLGGAQEIANAVAFLAS   91
usage_00074.pdb        68  ILAQVP-AGRLGGAQEIANAVAFLAS   92
usage_00086.pdb       102  ALQFIP-AKRVGTPAEVAGVVSFLAS  126
usage_00106.pdb        85  MVARTP-VGRIGDPVDIARAYLFLAS  109
usage_00107.pdb       102  MVARTP-VGRIGDPVDIARAYLFLA-  125
usage_00108.pdb        85  MVARTP-VGRIGDPVDIARAYLFLAS  109
usage_00109.pdb        85  MVARTP-VGRIGDPVDIARAYLFLAS  109
usage_00178.pdb        73  -----------LKPKLIAPVVAYLCH   87
                                            a     L  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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