################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:38 2021 # Report_file: c_1199_305.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00232.pdb # 4: usage_00478.pdb # 5: usage_00479.pdb # 6: usage_01737.pdb # 7: usage_01832.pdb # 8: usage_01879.pdb # 9: usage_01916.pdb # 10: usage_02094.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 40 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 40 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ---PWTSGASTSQETWNRQDLLVTFKTA-HAKKQEV-VVL 35 usage_00008.pdb 1 ---PWTSGASTSQETWNRQDLLVTFKTA-HAKKQEV-VVL 35 usage_00232.pdb 1 ---ELFDLLNP--SSDVSER-LQMFDDPRNK-RGVI-IK- 31 usage_00478.pdb 1 -LP-WTA-------HWNYKERMVTFKVP----DVTVL--- 24 usage_00479.pdb 1 ---PWTAGADT---HWNYKERMVTFKVQ----DVTV---- 26 usage_01737.pdb 1 ---PWTSPSS---TAWRNRELLMEFEGA-HATKQSV-VA- 31 usage_01832.pdb 1 L--PWHAGADTGTPHWNNKEALVEFKDA-HAKRQTV-VV- 35 usage_01879.pdb 1 ---PWHAGADTGTPHWNNKEALVEFKDA-HAKRQTV-VV- 34 usage_01916.pdb 1 ---PWHAGADTGTPHWNNKEALVEFKDA-HAKRQTV-VV- 34 usage_02094.pdb 1 ---PWSSAGS---TVWRNRETLMEFEEP-HATKQSV-IA- 31 w w F v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################