################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:23 2021 # Report_file: c_0205_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00081.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00107.pdb # 5: usage_00108.pdb # 6: usage_00132.pdb # 7: usage_00225.pdb # # Length: 136 # Identity: 98/136 ( 72.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/136 ( 72.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/136 ( 18.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 -ASVDLAAPVTTGDIVTFFSSALNLS----------NTALNLLSENGAYLLHIAFRLQEN 49 usage_00091.pdb 1 GASVDLAAPVTTGDIVTFFSSALNLSA-G--AGSPNNTALNLLSENGAYLLHIAFRLQEN 57 usage_00092.pdb 1 -ASVDLAAPVTTGDIVTFFSSALNLSAGAGS---PNNTALNLLSENGAYLLHIAFRLQEN 56 usage_00107.pdb 1 -TSVDLAAPVTTGDIVTFFSSALNLNA-G--AGNPNNTTLNLFAENGAYLLHIAFRLQEN 56 usage_00108.pdb 1 -TSVDLAAPVTTGDIVTFFSSAL-------------NTTLNLFAENGAYLLHIAFRLQEN 46 usage_00132.pdb 1 -TSVDLAAPVTTGDIVTFFSSALNLNA-G--AGNPNNTTLNLFAENGAYLLHIAFRLQEN 56 usage_00225.pdb 1 GTSVDLAAPVTTGDIVTFFSSALNLNA-G--AGNPNNTTLNLFAENGAYLLHIAFRLQEN 57 SVDLAAPVTTGDIVTFFSSAL NT LNL ENGAYLLHIAFRLQEN usage_00081.pdb 50 VIVFNSRQPNAPWLVEQRVSNVANQF---IGSGGKAMVTVFDHGDKYQVVINEKTVIQYT 106 usage_00091.pdb 58 VIVFNSRQPNAPWLVEQRVSNVANQF---IGSGGKAMVTVFDHGDKYQVVINEKTVIQYT 114 usage_00092.pdb 57 VIVFNSRQPNAPWLVEQRVSNVANQF---IGSGGKAMVTVFDHGDKYQVVINEKTVIQYT 113 usage_00107.pdb 57 VIIFNSRQPDGPWLVEQRVSDVANQF---AGIDGKAMVTVFDHGDKYQVVINEKTVIQYT 113 usage_00108.pdb 47 VIIFNSRQPDGPWLVEQRVSD-----VAGAGIDGKAMVTVFDHGDKYQVVINEKTVIQYT 101 usage_00132.pdb 57 VIIFNSRQPDGPWLVEQAVSDVANQF---AGIDGKAMVTVFDHGDKYQVVINEKTVIQYT 113 usage_00225.pdb 58 VIIFNSRQPDGPWLVEQRVSDVANQF---AGIDGKAMVTVFDHGDKYQVVINEKTVIQYT 114 VI FNSRQP PWLVEQrVS G GKAMVTVFDHGDKYQVVINEKTVIQYT usage_00081.pdb 107 KQISGTTSSLSYN--- 119 usage_00091.pdb 115 KQISGTTSSLSYNST- 129 usage_00092.pdb 114 KQISGTTSSLSYNSTE 129 usage_00107.pdb 114 KQISGLTSSLSYNA-- 127 usage_00108.pdb 102 KQISGLTSSLSYNAT- 116 usage_00132.pdb 114 KQISGLTSSLSYNAT- 128 usage_00225.pdb 115 KQISGLTSSLSYNATE 130 KQISG TSSLSYN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################