################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:28 2021 # Report_file: c_1208_112.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00575.pdb # 2: usage_00861.pdb # 3: usage_00862.pdb # 4: usage_01013.pdb # 5: usage_02185.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 64 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 64 ( 65.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00575.pdb 1 DIRPSPHF-------------GTVEVRV-D--------TPLTLSHAVN-AGLIQATAHWL 37 usage_00861.pdb 1 DIRPSPAF-------------GTVEVRVMD--------TPLTLDHAINMAGLIQATAHWL 39 usage_00862.pdb 1 DIRPSPAF-------------GTVEVRVMD--------TPLTLDHAINMAGLIQATAHWL 39 usage_01013.pdb 1 DYIDIPI-TNSNIFDDSSTPYNVRIWH-AP---------------TMTEVNHILALMR-- 41 usage_02185.pdb 1 QGE-LD-R--------------FGGISV--RLARLDALDRLDAAAFQKGLQAAVQQWRSE 42 d p i a usage_00575.pdb 38 LTER 41 usage_00861.pdb 40 LTER 43 usage_00862.pdb 40 LTER 43 usage_01013.pdb ---- usage_02185.pdb 43 G--- 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################