################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:36 2021 # Report_file: c_0302_26.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00090.pdb # 2: usage_00114.pdb # 3: usage_00153.pdb # # Length: 119 # Identity: 98/119 ( 82.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/119 ( 98.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/119 ( 1.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 KKFVVMAGCDGRAKSRSYYTDFAEGLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAG 60 usage_00114.pdb 1 KKFVVMAGCDGRAKSRSYYTDFAEGLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAG 60 usage_00153.pdb 1 --RFVVMAGDGRQKSRSYYTEVAENLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAG 58 fvVmagcDGRaKSRSYYTdfAEgLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAG usage_00090.pdb 61 QCNDSYSLAVIALKLKEVFGLEDVNDLPIVYNIAWYEQKAVIVLLALLSLGVKNIHLGP 119 usage_00114.pdb 61 QCNDSYSLAVIALKLKEVFGLEDVNDLPIVYNIAWYEQKAVIVLLALLSLGVKNIHLGP 119 usage_00153.pdb 59 QCNDSYSLAVIALKLKEVFGLDDINDLPVSYDIAWYEQKAVAVLLALLFLGVKGIRLGP 117 QCNDSYSLAVIALKLKEVFGLeDvNDLPivYnIAWYEQKAViVLLALLsLGVKnIhLGP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################