################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:42 2021 # Report_file: c_1363_43.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_01394.pdb # 4: usage_01421.pdb # 5: usage_01649.pdb # # Length: 76 # Identity: 49/ 76 ( 64.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 76 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 76 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 ----LQQIDKLICSWLKQIDNVIPQLIME-MT--T------TKRHRFDLVTNVDKQIQQQ 47 usage_00038.pdb 1 ---TLQQIDKLICSWLKQIDNVIPQLIMEM-----TDLVTN-----------VDKQIQQQ 41 usage_01394.pdb 1 TDKTLQQIDKLICSWLKQIDNVIPQLIME-M-TT---------------VTNVDKQIQQQ 43 usage_01421.pdb 1 ---TLQQIDKLICSWLKQIDNVIPQLIME-M---TE-----TKRHRFDLVTNVDKQIQQQ 48 usage_01649.pdb 1 ---TLQQIDKLICSWLKQIDNVIPQLIME----------LV---------T-VDKQIQQQ 37 LQQIDKLICSWLKQIDNVIPQLIME VDKQIQQQ usage_00037.pdb 48 FQQFLATYFPEHQLLA 63 usage_00038.pdb 42 FQQFLATYFPEHQLLA 57 usage_01394.pdb 44 FQQFLATYFPEHQLLA 59 usage_01421.pdb 49 FQQFLATYFPEHQLLA 64 usage_01649.pdb 38 FQQFLATYFPEHQLLA 53 FQQFLATYFPEHQLLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################