################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:47:12 2021 # Report_file: c_0565_11.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00099.pdb # 4: usage_00100.pdb # 5: usage_00101.pdb # 6: usage_00102.pdb # 7: usage_00106.pdb # 8: usage_00202.pdb # 9: usage_00203.pdb # 10: usage_00204.pdb # 11: usage_00205.pdb # 12: usage_00206.pdb # 13: usage_00207.pdb # 14: usage_00208.pdb # 15: usage_00209.pdb # 16: usage_00210.pdb # 17: usage_00211.pdb # 18: usage_00212.pdb # 19: usage_00217.pdb # 20: usage_00218.pdb # 21: usage_00219.pdb # 22: usage_00220.pdb # # Length: 121 # Identity: 7/121 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/121 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/121 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 DVLCYITKPD-------------RHNLVVVKVETNKGIYGLGCATF-QQ--RP----KAV 40 usage_00036.pdb 1 DVLCYITKPD-------------RHNLVVVKVETNKGIYGLGCATF-QQ--RP----KAV 40 usage_00099.pdb 1 NIECFITRPD-------------RHNLVTVRVTTEQGITGHGCATF-QQ--RP----LAV 40 usage_00100.pdb 1 NIECFITRPD-------------RHNLVTVRVTTEQGITGHGCATF-QQ--RP----LAV 40 usage_00101.pdb 1 DVLCYITKPD-------------RHNLVVVKVETNKGIYGLGCATF-QQ--RP----KAV 40 usage_00102.pdb 1 DVLCYITKPD-------------RHNLVVVKVETNKGIYGLGCATF-QQ--RP----KAV 40 usage_00106.pdb 1 ----------------------DSGPLVLIDVTTDQGVTGHSYLFA-YTRLAL----KPL 33 usage_00202.pdb 1 DIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPATTA--ITGDTL-QG 57 usage_00203.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00204.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00205.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00206.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00207.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00208.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00209.pdb 1 NIECVITKPD-------------RHNLITVIVETESGVTGYGCATF-QQ--RP----LAV 40 usage_00210.pdb 1 NIECVITKPD-------------RHNLITVIVETESGVTGYGCATF-QQ--RP----LAV 40 usage_00211.pdb 1 NIECVITKPD-------------RHNLITVIVETESGVTGYGCATF-QQ--RP----LAV 40 usage_00212.pdb 1 NIECVITKPD-------------RHNLITVIVETESGVTGYGCATF-QQ--RP----LAV 40 usage_00217.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00218.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00219.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 usage_00220.pdb 1 DIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATF-QQ--RP----LAV 40 l v v t G G g a usage_00035.pdb 41 SLVVSEYLKPILIGRDANNIEDLWQMMMVNS-Y-WRNGPILNNAISGVDMALWDIKGKLA 98 usage_00036.pdb 41 SLVVSEYLKPILIGRDANNIEDLWQMMMVNS-Y-WRNGPILNNAISGVDMALWDIKGKLA 98 usage_00099.pdb 41 KTLVDEYLQPLMIGRDANNIEDLWQMMNVNA-Y-WRNGPLMNNAISGVDMALWDIKGQLA 98 usage_00100.pdb 41 KTLVDEYLQPLMIGRDANNIEDLWQMMNVNA-Y-WRNGPLMNNAISGVDMALWDIKGQLA 98 usage_00101.pdb 41 SLVVSEYLKPILIGRDANNIEDLWQMMMVNS-Y-WRNGPILNNAISGVDMALWDIKGKLA 98 usage_00102.pdb 41 SLVVSEYLKPILIGRDANNIEDLWQMMMVNS-Y-WRNGPILNNAISGVDMALWDIKGKLA 98 usage_00106.pdb 34 VHLVEDIGRELA-GKA-LVPVDLMKAMDAKF-RLLGWQGLVGMAVSGLDMAFWDALGQLA 90 usage_00202.pdb 58 QYIIREIFAPVILGSDLSDYKQTLELAFKKVF--------NSAA-KAIDLAYHDLLAKEQ 108 usage_00203.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00204.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00205.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00206.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00207.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00208.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00209.pdb 41 KTMVDEYLKPLLIGKDANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKIA 98 usage_00210.pdb 41 KTMVDEYLKPLLIGKDANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKIA 98 usage_00211.pdb 41 KTMVDEYLKPLLIGKDANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKIA 98 usage_00212.pdb 41 KTMVDEYLKPLLIGKDANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKIA 98 usage_00217.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00218.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00219.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 usage_00220.pdb 41 KTMVDEYLKPILIGKNANNIEDLWQMMMVNA-Y-WRNGPVINNAISGVDMALWDIKAKLA 98 v e p G dl m A sg DmA wD a usage_00035.pdb 99 N 99 usage_00036.pdb 99 N 99 usage_00099.pdb 99 G 99 usage_00100.pdb 99 G 99 usage_00101.pdb 99 N 99 usage_00102.pdb 99 N 99 usage_00106.pdb 91 G 91 usage_00202.pdb 109 D 109 usage_00203.pdb 99 G 99 usage_00204.pdb 99 G 99 usage_00205.pdb 99 G 99 usage_00206.pdb 99 G 99 usage_00207.pdb 99 G 99 usage_00208.pdb 99 G 99 usage_00209.pdb 99 N 99 usage_00210.pdb 99 N 99 usage_00211.pdb 99 N 99 usage_00212.pdb 99 N 99 usage_00217.pdb 99 G 99 usage_00218.pdb 99 G 99 usage_00219.pdb 99 G 99 usage_00220.pdb 99 G 99 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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