################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:16 2021 # Report_file: c_1164_54.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00420.pdb # 2: usage_01121.pdb # 3: usage_01122.pdb # 4: usage_01522.pdb # 5: usage_01833.pdb # 6: usage_01866.pdb # 7: usage_01894.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 35 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 35 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00420.pdb 1 -AKVEVNLA---AI-PL-GKNVVVKWQGKPVFIR- 28 usage_01121.pdb 1 -AKVEVNLA---AI-PL-GKNVVVKWQGKPVFIR- 28 usage_01122.pdb 1 MAKVEVNLA---AI-PL-GKNVVVKWQGKPVFIR- 29 usage_01522.pdb 1 -AKVEVNLA---AI-PL-GKNVVVKWQGKPVFIR- 28 usage_01833.pdb 1 ---------TERPHPFPLGIDLILT-GERLLAIPR 25 usage_01866.pdb 1 -AKVEVNLA---AI-PL-GKNVVVKWQGKPVFIR- 28 usage_01894.pdb 1 -SKIEIKLS---DI-PE-GKNVAFKWRGKPLFVR- 28 i p Gknv k gkp fir #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################