################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:16 2021 # Report_file: c_1439_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00797.pdb # 6: usage_00798.pdb # # Length: 67 # Identity: 43/ 67 ( 64.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 67 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 67 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 GSLLAATTEAPGE-YFFSDGIRLKKYRGMDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV 59 usage_00009.pdb 1 GSLLAATTEAPGE-YFFSDGIRLKKYRGMDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV 59 usage_00043.pdb 1 GSLLAATTEAPGEY---------------DKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV 45 usage_00044.pdb 1 GSLLAATTEAPGEY---------------DKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV 45 usage_00797.pdb 1 GSLLAATTEAPGE-----------------KGSIQKFVPYLIAGIQHGCQDIGARSLSVL 43 usage_00798.pdb 1 GSLLAATTEAPGE-----------------KGSIQKFVPYLIAGIQHGCQDIGARSLSVL 43 GSLLAATTEAPGE KGSI KFVPYLIAGIQH CQDIGA SL usage_00008.pdb 60 RAMMYSG 66 usage_00009.pdb 60 RAMMYSG 66 usage_00043.pdb 46 RAMMYSG 52 usage_00044.pdb 46 RAMMYSG 52 usage_00797.pdb 44 RSMMYSG 50 usage_00798.pdb 44 RSMMYSG 50 R MMYSG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################