################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:53:07 2021 # Report_file: c_0288_16.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00104.pdb # 2: usage_00106.pdb # 3: usage_00121.pdb # 4: usage_00122.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # 7: usage_00412.pdb # 8: usage_00413.pdb # # Length: 157 # Identity: 62/157 ( 39.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/157 ( 57.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/157 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----S 53 usage_00106.pdb 1 ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----S 53 usage_00121.pdb 1 ---PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGD- 56 usage_00122.pdb 1 ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----- 52 usage_00221.pdb 1 ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTW------ 51 usage_00222.pdb 1 ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----- 52 usage_00412.pdb 1 YQPSIETGTIKAADGTTDLHYRL-KPANFDPAKKYPVIVYVYGGPHAQCVTGGWQ----- 54 usage_00413.pdb 1 YQPSIETGTIKAADGTTDLHYRL-KPANFDPAKKYPVIVYVYGGPHAQCVTGGWQ----- 54 i tGTi AADG T L Y l P FDPAKkYPViVYVYGGPhaQ VT W usage_00104.pdb 54 S--VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS 111 usage_00106.pdb 54 S--VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS 111 usage_00121.pdb 57 ----HLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQP 112 usage_00122.pdb 53 ---VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS 109 usage_00221.pdb 52 ----GGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS 107 usage_00222.pdb 53 ----GGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS 108 usage_00412.pdb 55 -NGARGWDTY-ASKGY-IFTIDNRGSSNRGLTFENATFRRLGIEEGKDQVKGVEFLKSLP 111 usage_00413.pdb 55 -NGARGWDTY-ASKGY-IFTIDNRGSSNRGLTFENATFRRLGIEEGKDQVKGVEFLKSLP 111 gwd Y A kGY Ft D RGs nRG Fe rrlG E DQ GV fLKs usage_00104.pdb 112 WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 148 usage_00106.pdb 112 WVDADRIGVHGWAYGGFMTTNLMLTHGDVFKVGVAGG 148 usage_00121.pdb 113 WVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGA 149 usage_00122.pdb 110 WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAG- 145 usage_00221.pdb 108 WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 144 usage_00222.pdb 109 WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 145 usage_00412.pdb 112 YVDSERIGVHGWSFGGHT-TA-LLRYPEIFKVGVAG- 145 usage_00413.pdb 112 YVDSERIGVHGWSFGGHT-TA-LLRYPEIFKVGVAGG 146 VD RIGVhGWs GG t l fkvGVAG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################