################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:50:10 2021 # Report_file: c_1212_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00004.pdb # 2: usage_00306.pdb # 3: usage_00317.pdb # 4: usage_00822.pdb # 5: usage_00893.pdb # 6: usage_00894.pdb # 7: usage_00905.pdb # 8: usage_00999.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 66 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/ 66 ( 87.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 GQ-------------IIVVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRK- 40 usage_00306.pdb 1 GQ-------------IIVVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRKK 41 usage_00317.pdb 1 GQ-------------IIVVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRKK 41 usage_00822.pdb 1 -----------------VVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRKK 37 usage_00893.pdb 1 GQ-------------IIVVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRKK 41 usage_00894.pdb 1 GQ-------------IIVVIWVIVSPNNDKQKYTLKIN------HDCVPEQVIAEAIRKK 41 usage_00905.pdb 1 --YECACGKYKRQRFEGKVCER--------CGVEVTK-------SIVR------------ 31 usage_00999.pdb 1 LP-------------ITLI------IDG-------EIVRDNLKEAGVDEQWLKQEMKKK- 33 v i usage_00004.pdb ------ usage_00306.pdb ------ usage_00317.pdb ------ usage_00822.pdb ------ usage_00893.pdb 42 TRSML- 46 usage_00894.pdb 42 TRSML- 46 usage_00905.pdb 32 -----R 32 usage_00999.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################