################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:36 2021 # Report_file: c_1269_25.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00260.pdb # 2: usage_00552.pdb # 3: usage_00553.pdb # 4: usage_00554.pdb # 5: usage_01251.pdb # 6: usage_01252.pdb # 7: usage_01304.pdb # 8: usage_01305.pdb # # Length: 74 # Identity: 34/ 74 ( 45.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 74 ( 68.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 74 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 TQGVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEMFI 59 usage_00552.pdb 1 --GVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSTNRIKQKITN-EMFI 56 usage_00553.pdb 1 ----GVDSSHIVGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEMFI 56 usage_00554.pdb 1 --GVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEMFI 57 usage_01251.pdb 1 TQGVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEFIQ 59 usage_01252.pdb 1 --GVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEFIQ 57 usage_01304.pdb 1 TQGVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEMFI 59 usage_01305.pdb 1 TQGVDSSHI-VDGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSKTNRIKQKITNEMFI 59 dsshi vdGKKTEEIEKIATKRATIRVAQNIVHKLKEAYLSktnrikqkit E usage_00260.pdb 60 Q--M---------- 61 usage_00552.pdb 57 Q--M---------- 58 usage_00553.pdb 57 Q--M---------- 58 usage_00554.pdb 58 Q--M--TQPIYDSL 67 usage_01251.pdb 60 T--QPIYDSL---- 67 usage_01252.pdb 58 TQPI--YDSL---- 65 usage_01304.pdb 60 Q--M---------- 61 usage_01305.pdb 60 Q--M---------- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################