################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:17 2021 # Report_file: c_1442_899.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_02862.pdb # 2: usage_15400.pdb # 3: usage_15673.pdb # 4: usage_15676.pdb # 5: usage_15677.pdb # 6: usage_17859.pdb # # Length: 49 # Identity: 10/ 49 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 49 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 49 ( 38.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02862.pdb 1 --TLQWVCIKAVPPE---------NEP--GATLDLNLSINACDKLIFRP 36 usage_15400.pdb 1 -ESLKWLCVKGIPPKD--------------VGVFVQFAINNCIKLLVRP 34 usage_15673.pdb 1 RESLQWICVKGIPP-------------ADKVSLNVQLSVSSCIKLFVRP 36 usage_15676.pdb 1 --SLQWICVKGIPP--------------DKVSLNVQLSVSSCIKLFVRP 33 usage_15677.pdb 1 --SLQWICVKGIPP---------------KVSLNVQLSVSSCIKLFVRP 32 usage_17859.pdb 1 --SLKWLCVKGIP---QKFNPDKD------VGVFVQFAINNCIKLLVRP 38 sL W CvKgiP v vq CiKL vRP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################