################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:32 2021 # Report_file: c_0463_94.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00234.pdb # 4: usage_00235.pdb # # Length: 108 # Identity: 56/108 ( 51.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/108 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/108 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 QLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPS 60 usage_00080.pdb 1 ----IYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPS 56 usage_00234.pdb 1 ----IHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNY 56 usage_00235.pdb 1 ----IHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNY 56 I TPTYSRPVQKAELTR ANT V LHW VEDA R L R L GL usage_00079.pdb 61 THLHVPTPRRG------LPRATEQRNAGLAWLRQRHQHQRAQPGVLFF 102 usage_00080.pdb 57 THLHVPTPRRG------LPRATEQRNAGLAWLRQRHQHQRAQPGVLFF 98 usage_00234.pdb 57 THLHVETPRN-YKLRGRIPRGTMQRNLALRWLRETFPRNSSQPGVVYF 103 usage_00235.pdb 57 THLHVETPRN-YKL--RIPRGTMQRNLALRWLRETFPRNSSQPGVVYF 101 THLHV TPR PR T QRN L WLR QPGV F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################