################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:29 2021 # Report_file: c_0456_32.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00084.pdb # 2: usage_00122.pdb # 3: usage_00123.pdb # 4: usage_00200.pdb # # Length: 84 # Identity: 9/ 84 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 84 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 84 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 EV----LYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVP 56 usage_00122.pdb 1 ---KIEVYTQPDCPPCVIVKEFLKHNNVAYEEFDVK-K----DAAARNRLLYDYDSYSTP 52 usage_00123.pdb 1 ---KIEVYAQPDCPPCVIVKEFLKHNNVAYEEFDVK-K----DAAARNRLLYDYDSYSTP 52 usage_00200.pdb 1 --GKVIMYGLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFP 58 Y Cp C kefLk V e v a SyS P usage_00084.pdb 57 VVVKG-DKHVLGYNEEKLKELIRG 79 usage_00122.pdb 53 TVVID-GEVVAGFQIEKLQQL--- 72 usage_00123.pdb 53 TVVID-GEVVAGFQIEKLQQLL-- 73 usage_00200.pdb 59 TTIINDEKAIVGFKEKEIRESLG- 81 tvvi v Gf ekl l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################