################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:49:18 2021 # Report_file: c_0699_34.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00218.pdb # 2: usage_00223.pdb # 3: usage_00225.pdb # 4: usage_00236.pdb # 5: usage_00237.pdb # 6: usage_00526.pdb # 7: usage_00528.pdb # 8: usage_00530.pdb # 9: usage_00533.pdb # 10: usage_00589.pdb # 11: usage_00754.pdb # 12: usage_00755.pdb # 13: usage_00756.pdb # 14: usage_00757.pdb # 15: usage_00975.pdb # 16: usage_00976.pdb # 17: usage_01077.pdb # 18: usage_01080.pdb # 19: usage_01082.pdb # 20: usage_01199.pdb # 21: usage_01204.pdb # 22: usage_01263.pdb # 23: usage_01264.pdb # 24: usage_01494.pdb # 25: usage_01497.pdb # 26: usage_01592.pdb # 27: usage_01712.pdb # 28: usage_01713.pdb # # Length: 73 # Identity: 6/ 73 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 73 ( 43.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 73 ( 30.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00218.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFKSEKGRNKFVT 57 usage_00223.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----G-RNKFVT 51 usage_00225.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIPSE--------KGRNKFVT 51 usage_00236.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--A---------RNKFVT 48 usage_00237.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--A---------RNKFVT 48 usage_00526.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----KGRNKFVT 52 usage_00528.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----KGRNKFVT 52 usage_00530.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----KGRNKFVT 52 usage_00533.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----KGRNKFVT 52 usage_00589.pdb 1 --GDVKVTVLG-SRNNSLLVES-VSSF-----QNTTHYSKLH--LEA-------KSQDLH 42 usage_00754.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFK--KGRNKFVT 55 usage_00755.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFK--KGRNKFVT 55 usage_00756.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFK--KGRNKFVT 55 usage_00757.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFK--KGRNKFVT 55 usage_00975.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANRE----KGRNKFVT 53 usage_00976.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANRE----KGRNKFVT 53 usage_01077.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR-----E-RNKFVT 51 usage_01080.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--A---------RNKFVT 48 usage_01082.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--A---------RNKFVT 48 usage_01199.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANR----EKGRNKFVT 53 usage_01204.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANRE----KGRNKFVT 53 usage_01263.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANRE----KGRNKFVT 53 usage_01264.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANRE----KGRNKFVT 53 usage_01494.pdb 1 GTIQVSVTVHDFPAKKQVLSNENTQLNSNNGY-LSTVTIKIP--ASKE-LKSDKGHKFVT 56 usage_01497.pdb 1 GTIQVSVTVHDFPAKKQVLSNENTQLNSNNGY-LSTVTIKIP--ASKE-LKSDKGHKFVT 56 usage_01592.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--A---------RNKFVT 48 usage_01712.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFKSEKGRNKFVT 57 usage_01713.pdb 1 GDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH-MGNVTFTIP--ANREFKSEKGRNKFVT 57 V VTVhd p kk vLs e t l vt ip kfvt usage_00218.pdb 58 VQATFGTQVVEKV 70 usage_00223.pdb 52 VQATFGTQVVEKV 64 usage_00225.pdb 52 VQATFGTQVVEKV 64 usage_00236.pdb 49 VQATFGTQVVEKV 61 usage_00237.pdb 49 VQATFGTQVVEKV 61 usage_00526.pdb 53 VQATFGTQVVEKV 65 usage_00528.pdb 53 VQATFGTQVVEKV 65 usage_00530.pdb 53 VQATFGTQVVEKV 65 usage_00533.pdb 53 VQATFGTQVVEKV 65 usage_00589.pdb 43 FHLKYNSLSVHND 55 usage_00754.pdb 56 VQATFGTQVVEKV 68 usage_00755.pdb 56 VQATFGTQVVEKV 68 usage_00756.pdb 56 VQATFGTQVVEKV 68 usage_00757.pdb 56 VQATFGTQVVEKV 68 usage_00975.pdb 54 VQATFGTQVVEKV 66 usage_00976.pdb 54 VQATFGTQVVEKV 66 usage_01077.pdb 52 VQATFGTQVVEKV 64 usage_01080.pdb 49 VQATFGTQVVEKV 61 usage_01082.pdb 49 VQATFGTQVVEKV 61 usage_01199.pdb 54 VQATFGTQVVEKV 66 usage_01204.pdb 54 VQATFGTQVVEKV 66 usage_01263.pdb 54 VQATFGTQVVEKV 66 usage_01264.pdb 54 VQATFGTQVVEKV 66 usage_01494.pdb 57 VVATFGNVQVEKV 69 usage_01497.pdb 57 VVATFGNVQVEKV 69 usage_01592.pdb 49 VQATFGTQVVEKV 61 usage_01712.pdb 58 VQATFGTQVVEKV 70 usage_01713.pdb 58 VQATFGTQVVEKV 70 v atfg Vekv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################