################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:58 2021 # Report_file: c_1260_112.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00115.pdb # 2: usage_00355.pdb # 3: usage_00810.pdb # 4: usage_01069.pdb # 5: usage_01070.pdb # 6: usage_01071.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 45 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 45 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 MKVNISI--------FGFGTVGRALAEIIAEKSRIFGVELNV--- 34 usage_00355.pdb 1 SKILVFGHQNPDSDA---IGSSVAFAYLAKEAWG---LDTEA--- 36 usage_00810.pdb 1 MRVSVSG----------SGNVAQYAIEKAMEFGA---RVITASDS 32 usage_01069.pdb 1 MRILVTG---------GSGLVGKAIQKVVADGAGLPGEDWVFVS- 35 usage_01070.pdb 1 MRILVTG---------GSGLVGKAIQKVVADGAGLPGEDWVFVSS 36 usage_01071.pdb 1 MRILVTG---------GSGLVGKAIQKVVADGAGLPGEDWVFVSS 36 m v g g v a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################