################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:37 2021 # Report_file: c_0008_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00033.pdb # 4: usage_00050.pdb # 5: usage_00055.pdb # 6: usage_00065.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00068.pdb # 10: usage_00078.pdb # 11: usage_00079.pdb # # Length: 305 # Identity: 74/305 ( 24.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 274/305 ( 89.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/305 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00032.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00033.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00050.pdb 1 EIITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAV 60 usage_00055.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00065.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00066.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00067.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00068.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00078.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 usage_00079.pdb 1 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 60 gIIpPvsTiFTaDgqlDKpgtaaliddLIkaGvDgLFflGsgGefsqLgaEErkaiarfa usage_00031.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00032.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00033.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00050.pdb 61 YDVT-N--KIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTL 117 usage_00055.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00065.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00066.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00067.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00068.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00078.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 usage_00079.pdb 61 IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW-KVSEANLIRYFEQV 119 iDhv r pvligtGGtNaretIeLsqhaqqagadGIvvinPYYw kvSEanLirYFeqv usage_00031.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00032.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00033.pdb 120 ADSVTLPV-LYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRS-IHTVKGAH 177 usage_00050.pdb 118 CEVSPHPVYLYNYPTATGKDIDAKVAKEIG--C--FTGVKDTIENIIHTL----DYKRLN 169 usage_00055.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00065.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00066.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00067.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00068.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00078.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 usage_00079.pdb 120 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAH 179 adsvtlPV LYNfPalTGqDltpalvKtla r iiGiKDTIdsvaHlr tvKgah usage_00031.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00032.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00033.pdb 178 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 237 usage_00050.pdb 170 PNMLVYSGSDMLIATVASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKLQFLHDE 229 usage_00055.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00065.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00066.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00067.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00068.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00078.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 usage_00079.pdb 180 PHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQ 239 PhftVlcGyDdhlfntlllGgDGaisAsgNfaPqVsVnllKawrdgdvakAagyhqtllq usage_00031.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00032.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00033.pdb 238 IPQ-YQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 289 usage_00050.pdb 230 VIE-----ASRIFGSLSSNYVLTKYFQGYDL-GYPRPPIFPLDDEEERQLIKKVEGIRAK 283 usage_00055.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00065.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00066.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00067.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00068.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00078.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 usage_00079.pdb 240 IPQMYQLD----TPFVNVIKEAIVLCG-RPVSTHVLPPASPLDEPRKAQLKTLLQQLK-- 292 ipq tpfvnvikeaivlcg rpv thvlPPasPLDeprkaQLktllqqlk usage_00031.pdb ----- usage_00032.pdb ----- usage_00033.pdb ----- usage_00050.pdb 284 LVELK 288 usage_00055.pdb ----- usage_00065.pdb ----- usage_00066.pdb ----- usage_00067.pdb ----- usage_00068.pdb ----- usage_00078.pdb ----- usage_00079.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################