################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:52 2021 # Report_file: c_0512_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00726.pdb # 2: usage_00727.pdb # 3: usage_00728.pdb # 4: usage_00729.pdb # 5: usage_00730.pdb # # Length: 133 # Identity: 122/133 ( 91.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/133 ( 91.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/133 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00726.pdb 1 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL 60 usage_00727.pdb 1 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL 60 usage_00728.pdb 1 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL 60 usage_00729.pdb 1 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL 60 usage_00730.pdb 1 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL 60 LPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIEL usage_00726.pdb 61 GCTGG-NTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGV-----VSLQPEI 114 usage_00727.pdb 61 GCTGGDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEI 120 usage_00728.pdb 61 GCTGG---GIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHG------VSLQPEI 111 usage_00729.pdb 61 GCTGGDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEI 120 usage_00730.pdb 61 GCT-----GIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHG------VSLQPEI 109 GCT GIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHG VSLQPEI usage_00726.pdb 115 LKNSQKFVKDKFA 127 usage_00727.pdb 121 LKNSQKFVKDKFA 133 usage_00728.pdb 112 LKNSQKFVKDKFA 124 usage_00729.pdb 121 LKNSQKFVKDKFA 133 usage_00730.pdb 110 LKNSQKFVKDKFA 122 LKNSQKFVKDKFA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################