################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:14:12 2021 # Report_file: c_0055_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00168.pdb # 3: usage_00169.pdb # 4: usage_00244.pdb # 5: usage_00268.pdb # 6: usage_00269.pdb # 7: usage_00270.pdb # 8: usage_00271.pdb # 9: usage_00273.pdb # 10: usage_00315.pdb # # Length: 225 # Identity: 96/225 ( 42.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 102/225 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/225 ( 2.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SRDQIMKVAEFLAEVGIKVLRGGAFKPRTSP-YFQGYGEKALRWMREAADEYGLVTVTEV 59 usage_00168.pdb 1 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEV 60 usage_00169.pdb 1 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEV 60 usage_00244.pdb 1 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV 60 usage_00268.pdb 1 SRDQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV 60 usage_00269.pdb 1 SRDQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV 60 usage_00270.pdb 1 SRDQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV 60 usage_00271.pdb 1 SRDQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV 60 usage_00273.pdb 1 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI 60 usage_00315.pdb 1 SYEQVAAVAEAVKKQGIKLLRGGAYKPRTSPYDFQGLGVEGLKILKRIADEFDLAVISEI 60 S Q A G lRGGAfKPRTSP FQG G L DE gL E usage_00001.pdb 60 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 119 usage_00168.pdb 61 LDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYIL 120 usage_00169.pdb 61 LDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYIL 120 usage_00244.pdb 61 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 120 usage_00268.pdb 61 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 120 usage_00269.pdb 61 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 120 usage_00270.pdb 61 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 120 usage_00271.pdb 61 MDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIM 120 usage_00273.pdb 61 VTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIM 120 usage_00315.pdb 61 VTPADIEIALDYIDVIQIGARNMQNFELLKAAGQVNKPILLKRGLAATIEEFINAAEYIM 120 E Y D QIGARN QNF LL G P LLKRG T E AEYI usage_00001.pdb 120 AQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 179 usage_00168.pdb 121 LEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAK 180 usage_00169.pdb 121 LEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAK 180 usage_00244.pdb 121 AQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 180 usage_00268.pdb 121 AQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 180 usage_00269.pdb 121 AQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 180 usage_00270.pdb 121 AQGNENVILCERGIRTFETATRFTLDDSAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 180 usage_00271.pdb 121 AQGNENVILCERGIRTFETATRFTLDDSAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAK 180 usage_00273.pdb 121 SQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAK 180 usage_00315.pdb 121 SQGNGQIILCERGIRTYERATRNTLDISAVPILKKETHLPVFVDVTHSTGRRDLLIPCAK 180 GN L ERGIRT E TR TLD AV K HLP VD H GRr L AK usage_00001.pdb 180 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEALG 224 usage_00168.pdb 181 AGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWHR 225 usage_00169.pdb 181 AGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWHR 225 usage_00244.pdb 181 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL- 224 usage_00268.pdb 181 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL- 224 usage_00269.pdb 181 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA-- 223 usage_00270.pdb 181 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL- 224 usage_00271.pdb 181 AAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL- 224 usage_00273.pdb 181 AALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILAS- 224 usage_00315.pdb 181 AALAIGADGVMAEVHPDPAVALSDSAQQMDIAQFNEFMEEV---- 221 A A gADG EVHP P ALSD QQ F e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################