################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:01 2021 # Report_file: c_1484_428.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00104.pdb # 2: usage_00526.pdb # 3: usage_01249.pdb # 4: usage_01685.pdb # 5: usage_01903.pdb # 6: usage_02069.pdb # 7: usage_02332.pdb # 8: usage_02491.pdb # 9: usage_02689.pdb # 10: usage_03385.pdb # 11: usage_03551.pdb # 12: usage_03839.pdb # 13: usage_04794.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 64 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 64 ( 78.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 ------SPEELARYCDSL------LKKSSKN------P----EEAELEDTLNQVMEKFKK 38 usage_00526.pdb 1 ---------SLKGMQKSI------TQL----GD-QF-NRKAQAKELNDHLNSVKQKIENK 39 usage_01249.pdb 1 ---TPEFLQGYADELQML------VQQ----YA----D----DKEKVALLKALWQYADE- 38 usage_01685.pdb 1 --SSSKSPELLARYCDSL------LKK---------------EEAELEDTLNQVMVVFK- 36 usage_01903.pdb 1 ------EELYTLIEFLKK------P--S---IS-ATGE----GIDETANYLKETVEK--- 35 usage_02069.pdb 1 SLEKLENRLLDMRDLYQE------WKE----CEE---D-----SPV---SRSYFKRA--- 36 usage_02332.pdb 1 ---TTAEALVLADSFIRD------LGR----AA-TS-A---DPEAGVKKTITDFW----- 37 usage_02491.pdb 1 -----------KPDAVRV------VEG----LC-RR------NREQAHQIQKNFVEVLDL 32 usage_02689.pdb 1 -------PEELARYCDSL------LKKSSKN------P----EEAELEDTLNQVMEKFK- 36 usage_03385.pdb 1 ---------ALLSFAEYF------CK------P-TV-N-MGQKQEILDLFSSVLYECVTQ 36 usage_03551.pdb 1 --TPQEIQEWRTEFAADV------KRI----QA----R----LPGML--NMTLYEKIKH- 37 usage_03839.pdb 1 --------EELARYCDSL------LK--------------------LEDTLNQVMEKFKK 26 usage_04794.pdb 1 ------CPEELANYCDLLRKTPLSKK-----------L----TSEEIEAKLKEVLKKLK- 38 usage_00104.pdb 39 I--- 39 usage_00526.pdb 40 AAKQ 43 usage_01249.pdb ---- usage_01685.pdb ---- usage_01903.pdb ---- usage_02069.pdb ---- usage_02332.pdb ---- usage_02491.pdb 33 LKAN 36 usage_02689.pdb ---- usage_03385.pdb ---- usage_03551.pdb ---- usage_03839.pdb 27 ---I 27 usage_04794.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################