################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:08 2021 # Report_file: c_0170_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00006.pdb # 2: usage_00019.pdb # 3: usage_00027.pdb # 4: usage_00030.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00046.pdb # # Length: 173 # Identity: 66/173 ( 38.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/173 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/173 ( 10.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 59 usage_00019.pdb 1 -RKITIALLGLDNAGKTTLLNSIQGE-R-DTTPTFGFNSTTLNEGKYKIEVFDLGGGKNI 57 usage_00027.pdb 1 PRKITIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIEVFDLGGGKNI 60 usage_00030.pdb 1 ---VRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGLRKI 57 usage_00043.pdb 1 -QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 59 usage_00044.pdb 1 ----RILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 56 usage_00046.pdb 1 --EVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 58 I LLGLDNAGKTTLL E TPT GFN K V D GG I usage_00006.pdb 60 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 119 usage_00019.pdb 58 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 117 usage_00027.pdb 61 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 120 usage_00030.pdb 58 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 117 usage_00043.pdb 60 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 119 usage_00044.pdb 57 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 116 usage_00046.pdb 59 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 118 R W Y YV D AD RFEE E LE P IFANKQDL TAA usage_00006.pdb 120 PASEIAEGLNLHTIRDRVWQIQSCSAL------TGEGVQDGMNWVCKN----- 161 usage_00019.pdb 118 PAAEVVKGLGLATCRNSHNVFPC-TAKMPAGQDVDHRLRDGLKWLVGTVDREF 169 usage_00027.pdb 121 PAAEVVKGLGLATCRNSHNVFPC-TAKMPAGQDVDHRLRDGLKWLVGTVDREF 172 usage_00030.pdb 118 PASEIAEGLNLHTIRDRVWQIQSCSAL------TGEGVQDGMNWVCKN----- 159 usage_00043.pdb 120 PASEIAEGLNLHTIRDRVWQIQSCSAL------TGEGVQDGMNWVCKN----- 161 usage_00044.pdb 117 PASEIAEGLNLHTIRDRVWQIQSCSAL------TGEGVQDGMNWVCKNV---- 159 usage_00046.pdb 119 PASEIAEGLNLHTIRDRVWQIQSCSAL------TGEGVQDGMNWVCKNV---- 161 PA E GL L T R A DG W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################