################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:29 2021 # Report_file: c_0176_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00039.pdb # 9: usage_00040.pdb # 10: usage_00041.pdb # 11: usage_00042.pdb # 12: usage_00043.pdb # 13: usage_00044.pdb # # Length: 150 # Identity: 32/150 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/150 ( 31.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/150 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -KKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWS-SERTDYPHYASQVALAVAGGEV 58 usage_00004.pdb 1 HVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYS-EESVDYPDYAKKVVQSILSNEA 59 usage_00005.pdb 1 --KVAFASDHGGRDLRMFLQQRASAHGYEVMDLGT---------PDFAKIGCEAVTSGRA 49 usage_00008.pdb 1 --KIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 57 usage_00009.pdb 1 ---IGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 56 usage_00010.pdb 1 ---IGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 56 usage_00011.pdb 1 -MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 58 usage_00039.pdb 1 ---IGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 56 usage_00040.pdb 1 -MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 58 usage_00041.pdb 1 ---IGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 56 usage_00042.pdb 1 -MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHG-NESVDYPDFGLKVAEAVKSGEC 58 usage_00043.pdb 1 -KRVFLSSDHAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREV-SDT- 57 usage_00044.pdb 1 -KRVFLSSDHAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREV-SDT- 57 sDH g L l G EV D G Pd v v s usage_00001.pdb 59 DGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKM 118 usage_00004.pdb 60 DFGILLG-TG-LGSIAANRYRGIRAALCLFPD-ARLARSHNNANILVLPGRLIGAELAFW 116 usage_00005.pdb 50 DCCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRTTGPEVAAS 109 usage_00008.pdb 58 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 117 usage_00009.pdb 57 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 116 usage_00010.pdb 57 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 116 usage_00011.pdb 59 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 118 usage_00039.pdb 57 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 116 usage_00040.pdb 59 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 118 usage_00041.pdb 57 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 116 usage_00042.pdb 59 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALD 118 usage_00043.pdb 58 SFGVLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRYIDPDTAQS 117 usage_00044.pdb 58 SFGVLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRYIDPDTAQS 117 g c TG g SIAAN IRaa C A R HN aN L g R A usage_00001.pdb 119 IVDAWLGAQYEGGRHQQRVEAITAIE---- 144 usage_00004.pdb 117 IVDTFLSTPFDGGRHERRIRKI-------- 138 usage_00005.pdb 110 ILSRFLSTNFEGGRHAAR------------ 127 usage_00008.pdb 118 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 147 usage_00009.pdb 117 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 146 usage_00010.pdb 117 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 146 usage_00011.pdb 119 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 148 usage_00039.pdb 117 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 146 usage_00040.pdb 119 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 148 usage_00041.pdb 117 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 146 usage_00042.pdb 119 IVDTWLKAEFQGGRHATRVGKIGEIEKKYS 148 usage_00043.pdb 118 VLYTFMTTAFLGGRHAVRVQKLGE------ 141 usage_00044.pdb 118 VLYTFMTTAFLGGRHAVRVQKL-------- 139 f GGRH R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################