################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:50 2021 # Report_file: c_0952_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00748.pdb # 2: usage_00945.pdb # 3: usage_00946.pdb # 4: usage_00952.pdb # 5: usage_00953.pdb # 6: usage_01529.pdb # 7: usage_01630.pdb # 8: usage_01681.pdb # # Length: 86 # Identity: 0/ 86 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 86 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 75/ 86 ( 87.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00748.pdb 1 GYEYKMRFVYAHFPI-NV---------AVTD-GG--RVVEIRNFF-GE----KIVRRIE- 41 usage_00945.pdb 1 ---------------YGA---------RQVYRENDHVVWTSQ---DAE----GNQFVAMF 29 usage_00946.pdb 1 ---------------YGA---------RQVYRENDHVVWTSQ---DAE----GNQFVAMF 29 usage_00952.pdb 1 ---------------YGA---------RQVYRENDHVVWTSQ---DAE----GNQFVAMF 29 usage_00953.pdb 1 ---------------YGA---------RQVYRENDHVVWTSQ---DAE----GNQFVAMF 29 usage_01529.pdb 1 -----------------------------------WDARDVA-----G----G-RYRVIN 15 usage_01630.pdb 1 ---------------YGA---------RQVYRENDHVVWTSQ---DAE----GNQFVAMF 29 usage_01681.pdb 1 ------------------GGQDELVFDG------DSIVVDR-------DGEVVARAPQF- 28 v usage_00748.pdb -------------------------- usage_00945.pdb 30 N-IS-EKRSVVSV--S---------- 41 usage_00946.pdb 30 N-IS-EKRSVVSV--S---------- 41 usage_00952.pdb 30 N-IS-EKRSVVSV--S---------- 41 usage_00953.pdb 30 N-IS-EKRSVVSV--S---------- 41 usage_01529.pdb 16 NVWGAETAQCIEV--GLETGNFTITR 39 usage_01630.pdb 30 N-IS-EKRSVVSV--S---------- 41 usage_01681.pdb 29 -----S-EGCVVLDLD---------- 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################