################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:26:13 2021 # Report_file: c_0151_10.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00035.pdb # 5: usage_00088.pdb # 6: usage_00112.pdb # 7: usage_00141.pdb # 8: usage_00142.pdb # 9: usage_00188.pdb # 10: usage_00189.pdb # 11: usage_00190.pdb # 12: usage_00191.pdb # 13: usage_00198.pdb # 14: usage_00199.pdb # 15: usage_00202.pdb # 16: usage_00206.pdb # 17: usage_00217.pdb # 18: usage_00218.pdb # 19: usage_00229.pdb # 20: usage_00230.pdb # # Length: 148 # Identity: 47/148 ( 31.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/148 ( 39.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/148 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTLDD-YAIAWFRQAPGKEREGVSGIDSG--D-G 54 usage_00033.pdb 1 --QLQESGGGLVQAGGSLRLSCTASRRT-GSNWCMGWFRQLAGKEPELVVALNFD--Y-D 54 usage_00034.pdb 1 --QLQESGGGLVQAGASLRLSCAASERLTVD-YAIGWFRQAPGKEREFVAAISWG--G-G 54 usage_00035.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASGRTLSS-YAMGWFRQAPGKEREFVAAINRS----G 54 usage_00088.pdb 1 --QLQESGGGLVQAGASLKLSCAASGRTFSS-YAMGWFRQAPGKEREFVAAISRS--G-G 54 usage_00112.pdb 1 --QLQESGGGLVQAGGSLTLSCAASGRTFSN-NAMGWFRQAPGKEREFVAAISWT--G-G 54 usage_00141.pdb 1 --QLQESGGGLVQAGGSLRLSCTGSGRTFRN-YPMAWFRQAPGKEREFVAGITWV--G-A 54 usage_00142.pdb 1 --QLQESGGGLVQAGGSLRLSCTGSGRTFRN-YPMAWFRQAPGKEREFVAGITWV--G-A 54 usage_00188.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGFTLDS-YAIGWFRQAPGKEREGVSCISAS--G-G 54 usage_00189.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGFTLDS-YAIGWFRQAPGKEREGVSCISAS--G-G 54 usage_00190.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGFTLDS-YAIGWFRQAPGKEREGVSCISAS--G-G 54 usage_00191.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGFTLDS-YAIGWFRQAPGKEREGVSCISAS--G-G 54 usage_00198.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASRRSSRS-WAMAWFRQAPGKEREFVAKISGD--G-R 56 usage_00199.pdb 1 QVQLQESGGGSVQAGGSLRLSCAVSEN---T-GRMGWFRQAPGKEREKVAIITRL--G-G 53 usage_00202.pdb 1 EVQLVESGGGLVQAGDSLRLSCTASGRTLGD-YGVAWFRQAPGKEREFVSVISRS--T-I 56 usage_00206.pdb 1 --QLQESGGGLVQAGASLRLSCAASERLTVD-YAIGWFRQAPGKEREFVAAISWG--G-G 54 usage_00217.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGFTFED-YAIGWFRQAPGKEREGVSCISNL--D-G 56 usage_00218.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGFTFED-YAIGWFRQAPGKEREGVSCISNL--D-G 56 usage_00229.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGFTLDS-YAIGWFRQAPGKEREGVSCISAS--G-G 54 usage_00230.pdb 1 --QLVESGGGLVQAGDSLRLSATASGRTFSR-AVMGWFRQAPGKEREFVAAISAAPGTAY 57 QL ESGGGlVQaG SL LSc S WFRQapGKErE V i usage_00001.pdb 55 SAYYADSVKGRFTISSDNAKNTVYLQMNSLRPEDTAVYYCARVR-T----G--WG--L-N 104 usage_00033.pdb 55 MTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARS-G--G----FS----- 102 usage_00034.pdb 55 LTVYGESVEGRFTISRDIAKNTMNLQMNVLRPEDTANYYCAASR-I--S----YA-VWNT 106 usage_00035.pdb 55 STFYADAVKGRFTISRDNAKNTVYLQMNSLKPEDTAAYYCAADR-F--SPVV-PG----P 106 usage_00088.pdb 55 DTKYADSVKGRFAISRDNDKNTVWLRMNSLKPEDTAVYYCAATTYA--S-LS-DT--Y-- 106 usage_00112.pdb 55 LLFYADSVNGRFTISRDNAKRTVTLQMNSLKPEDTAVYYCAAR--P--Q-G--DY----- 102 usage_00141.pdb 55 STLYADFAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYSCAAGR-G--I----VA--G-- 103 usage_00142.pdb 55 STLYADFAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYSCAAGR-G--I----VA--G-- 103 usage_00188.pdb 55 STNYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCAAD--H--P-G--LC----- 102 usage_00189.pdb 55 STNYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCAAD--H--P-G--LC----- 102 usage_00190.pdb 55 STNYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCAAD--H--P-G--LC----- 102 usage_00191.pdb 55 STNYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCAAD--H--P-G--LC----- 102 usage_00198.pdb 57 LTTYGDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCAADD-N--Y-----V-TA-- 105 usage_00199.pdb 54 YTSYAGPVKGRFTISQDNAKNTVYLLMNSLKPEDTAIYYCAADS-R--P----IY----- 101 usage_00202.pdb 57 ITDYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAVYYCAVIA-N--P-V-YAT--S-- 107 usage_00206.pdb 55 LTVYGESVEGRFTISRDIAKNTMNLQMNVLRPEDTANYYCAASR-I--S----YR-VWNT 106 usage_00217.pdb 57 STYYPDSVKGRFTASSDKAKNMVYLQMNSLKPEDTAVYYCAAVN-A--Q-G--IYC-T-- 107 usage_00218.pdb 57 STYYPDSVKGRFTASSDKAKNMVYLQMNSLKPEDTAVYYCAAVN-AQCT-----D-YI-- 107 usage_00229.pdb 55 STNYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCAAD--H--P-G--LC----- 102 usage_00230.pdb 58 YAFYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAVYYVAADL-K--M---QVA--A-Y 108 Y GRF S D Kn L Mn L EDTA Y cA usage_00001.pdb 105 APD----Y-----AMDYWGKGTLVTV-- 121 usage_00033.pdb 103 SNR----E-----LYDGWGQGTQVTVS- 120 usage_00034.pdb 107 IPY----N-----KLTLWGRGTQVTVS- 124 usage_00035.pdb 107 IPV----N-----TVDSWGQGTQVTV-- 123 usage_00088.pdb 107 IGE----H-----IYDDWGQGTQVTVS- 124 usage_00112.pdb 103 -----VTA-----HYDYWGQGTQVTVS- 119 usage_00141.pdb 104 RIP----A-----EYADWGQGTQVTVS- 121 usage_00142.pdb 104 RIP----A-----EYADWGQGTQVTVS- 121 usage_00188.pdb 103 -----TSESGRRRYLEVWGQGTQVTVS- 124 usage_00189.pdb 103 -----TSESGRRRYLEVWGQGTQVTV-- 123 usage_00190.pdb 103 -----TS---RRRYLEVWGQGTQVTVSS 122 usage_00191.pdb 103 -----TS---RRRYLEVWGQGTQVTVSS 122 usage_00198.pdb 106 SWR----S-----GPDYWGQGTQVTVS- 123 usage_00199.pdb 102 -SG----------TWRYWGQGTQVTV-- 116 usage_00202.pdb 108 RNS----D-----DYGHWGQGTQVTV-- 124 usage_00206.pdb 107 IPY----N-----KLTLWGRGTQVTVS- 124 usage_00217.pdb 108 DY-II--GPY---GMDYWGKGTQVTVS- 128 usage_00218.pdb 108 IGP----Y-----GMDYWGKGTQVTVS- 125 usage_00229.pdb 103 -----TSESGRRRYLEVWGQGTQVTVS- 124 usage_00230.pdb 109 MNQ----R-----SVDYWGQGTQVTVSS 127 WG GTqVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################