################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:47:08 2021 # Report_file: c_0336_5.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00004.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00016.pdb # 9: usage_00017.pdb # 10: usage_00021.pdb # 11: usage_00042.pdb # 12: usage_00043.pdb # 13: usage_00044.pdb # 14: usage_00053.pdb # 15: usage_00054.pdb # 16: usage_00067.pdb # 17: usage_00080.pdb # # Length: 78 # Identity: 21/ 78 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 78 ( 64.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 78 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTGN----KETKLADGSYFGEICLLTRGR 54 usage_00007.pdb 1 -FEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSD--GVIATSLSDGSYFGEICLLTRER 57 usage_00008.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KEMKLSDGSYFGEICLLTRGR 55 usage_00009.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KEMKLSDGSYFGEICLLTRGR 55 usage_00011.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLT-------EMKLSDGSYFGEICLLTRGR 52 usage_00012.pdb 1 -FEVFQPGDYIIREGTIGKK-YFIQHGVVSVLT-------E-KLSDGSYFGEICLLTRGR 50 usage_00013.pdb 1 --EVFQPGDYIIREGTIGKK-YFIQHGVVSVLT-------E-KLSDGSYFGEICLLTRGR 49 usage_00016.pdb 1 RFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKS--S-KEMKLTDGSYFGEICLLTKGR 57 usage_00017.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KETKLADGSYFGEICLLTRGR 56 usage_00021.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KETKLADGSYFGEICLLTRGR 55 usage_00042.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KEMKLSDGSYFGEICLLTRGR 56 usage_00043.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKN----KEMKLSDGSYFGEICLLTRGR 55 usage_00044.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KEMKLSDGSYFGEICLLTRGR 56 usage_00053.pdb 1 -PVIYGPGEYIIRAGELGSDVYFINRGSVEVLSADEKT-RYAILSEGQFFGEMALILRAP 58 usage_00054.pdb 1 -FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KETKLADGSYFGEICLLTRGR 56 usage_00067.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLT------KEMKLSDGSYFGEICLLTRGR 52 usage_00080.pdb 1 --EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N-KEMKLSDGSYFGEICLLTRGR 55 evfqPgdYiIreG G yFIq G v v L dGsyFGEicLltr r usage_00004.pdb 55 RTARVRADTYCRLYSLS- 71 usage_00007.pdb 58 RVASVKCETYCTLFSLS- 74 usage_00008.pdb 56 RTASVRADTYCRLYSLSV 73 usage_00009.pdb 56 RTASVRADTYCRLYSLS- 72 usage_00011.pdb 53 RTASVRADTYCRLYSLS- 69 usage_00012.pdb 51 RTASVRADTYCRLYSLS- 67 usage_00013.pdb 50 RTASVRADTYCRLYSLS- 66 usage_00016.pdb 58 RTASVRADTYCRLYSLSV 75 usage_00017.pdb 57 RTASVRADTYCRLYSLS- 73 usage_00021.pdb 56 RTASVRADTYCRLYSLSV 73 usage_00042.pdb 57 RTASVRADTYCRLYSLS- 73 usage_00043.pdb 56 RTASVRADTYCRLYSLS- 72 usage_00044.pdb 57 RTASVRADTYCRLYSLS- 73 usage_00053.pdb 59 RTATVRARTFCDLYRLDK 76 usage_00054.pdb 57 RTASVRADTYCRLYSLSV 74 usage_00067.pdb 53 RTASVRADTYCRLYSLS- 69 usage_00080.pdb 56 RTASVRADTYCRLYSLSV 73 RtA Vra TyC LysLs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################