################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:41 2021 # Report_file: c_1052_28.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00106.pdb # 4: usage_00153.pdb # 5: usage_00160.pdb # 6: usage_00208.pdb # 7: usage_00240.pdb # 8: usage_00382.pdb # # Length: 86 # Identity: 13/ 86 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 86 ( 20.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 86 ( 31.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 -----------------ATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYL 43 usage_00105.pdb 1 --------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL 46 usage_00106.pdb 1 VAAPGSWIYSTYPTSTYASLSGTSMATPHVAGVAGLLAS-QG-RSASNIRAAIENTADKI 58 usage_00153.pdb 1 --------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL 46 usage_00160.pdb 1 --------------NKYGAKSGTAMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL 46 usage_00208.pdb 1 -----------------ATYSGTSMATPHVAGAAALVLSVNPDLTTLELKELLMSSGDAN 43 usage_00240.pdb 1 -----------------ASCNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSL 43 usage_00382.pdb 1 ----------------YTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIV 44 GT MA PHVAG AaL p l t usage_00104.pdb 44 G--S--S-FYYG-KGLINVEAAAQ-- 61 usage_00105.pdb 47 G--D--S-FYYG-KGLINVQAAAQ-- 64 usage_00106.pdb 59 S--GT-G-TYWA-KGRVNAYKAVQY- 78 usage_00153.pdb 47 G--D--S-FYYG-KGLINVQAAAQ-- 64 usage_00160.pdb 47 G--D--S-FYYG-KGLINVEAAAQ-- 64 usage_00208.pdb 44 A--A--LNGKTVAGTRLNVNQALIDA 65 usage_00240.pdb 44 G--S--T-NLYG-SGLVNAEAATR-- 61 usage_00382.pdb 45 KPDEIAD-IAYG-AGRVNAYKAAYY- 67 g N A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################