################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:02 2021 # Report_file: c_0776_49.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00198.pdb # 2: usage_00199.pdb # 3: usage_00200.pdb # 4: usage_00386.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # 7: usage_00639.pdb # 8: usage_00640.pdb # 9: usage_00641.pdb # 10: usage_00642.pdb # 11: usage_00643.pdb # # Length: 81 # Identity: 42/ 81 ( 51.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 81 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 81 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00198.pdb 1 GSALMGIGIATGENRAAE-AAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAAD 59 usage_00199.pdb 1 -SALMGIGIATGENRAAE-AAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAAD 58 usage_00200.pdb 1 -SALMGIGIATGENRAAE-AAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAAD 58 usage_00386.pdb 1 GSALMGIGVSSGENRAVE-AAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAAD 59 usage_00410.pdb 1 GSALMGIGVSSGENRAVE-AAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAAD 59 usage_00411.pdb 1 GSALMGIGVSSGENRAVE-AAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAAD 59 usage_00639.pdb 1 GSALMGIGIATGENRAAE-AAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAAD 59 usage_00640.pdb 1 --ALMGIG------RAAE-AAKKAISSPL--AAID--QGVLMNITGGTNLSLYEVQEAAD 47 usage_00641.pdb 1 -SALMGIGIA----RAAE-AAKKAISSP--EAAIDGAQGVLMNITGGTNLSLYEVQEAAD 52 usage_00642.pdb 1 -SALMGIGIA------AE-AAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAAD 52 usage_00643.pdb 1 GSALMGIGIA--------TAAKKAISSPLLEAAIDGAQGVLMNIT------LYEVQEAAD 46 ALMGIG AAKKAISSP I QGVLMNIT L E QEAAD usage_00198.pdb 60 IVASASDQDVNMIFGS----- 75 usage_00199.pdb 59 IVASASDQDVNMIFGSVINE- 78 usage_00200.pdb 59 IVASASDQDVNMIFGS----- 74 usage_00386.pdb 60 IVQDAADEDVNMIFGTVI--- 77 usage_00410.pdb 60 IVQDAADEDVNMIFGTVI--- 77 usage_00411.pdb 60 IVQDAADEDVNMIFGTVINPE 80 usage_00639.pdb 60 IVASASDQDVNMIFGSVINEN 80 usage_00640.pdb 48 IVASASDQDVNMIFGSVINEN 68 usage_00641.pdb 53 IVASASDQDVNMIFGSVINEN 73 usage_00642.pdb 53 IVASASDQDVNMIFGSVINEN 73 usage_00643.pdb 47 IVASASDQDVNMIFGSVINE- 66 IV A D DVNMIFG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################