################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:39 2021 # Report_file: c_0769_33.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00359.pdb # 2: usage_00419.pdb # 3: usage_00644.pdb # 4: usage_00708.pdb # 5: usage_00710.pdb # 6: usage_00711.pdb # 7: usage_00714.pdb # 8: usage_00813.pdb # # Length: 81 # Identity: 1/ 81 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 81 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 81 ( 46.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00359.pdb 1 -RGLIVA---PPKA-GKT-LLQNIAQSIAYN-----HP----DCVLVLLIDER-PEEVTE 44 usage_00419.pdb 1 ----IATFAAYRGRGIATKLLTSLLESNT-H-----V-------KWSLNCD-INNEAALK 42 usage_00644.pdb 1 -NLLVLA---GAGS-GKTRVLVHRIAWLMSV-----ENCSPY--SIMAVTF-T-NKAAAE 46 usage_00708.pdb 1 -PALVIA---GAGS-GKTRTLIYRIAHLIGH-----YGVHPG--EILAVTF-T-NKAAAE 46 usage_00710.pdb 1 -PALVIA---GAGS-GKTRTLIYRIAHLIGH-----YGVHPG--EILAVTF-T-NKAAAE 46 usage_00711.pdb 1 -PALVIA---GAGS-GKTRTLIYRIAHLIGH-----YGVHPG--EILAVTF-T-NKAAAE 46 usage_00714.pdb 1 GPALVIA---GAGS-GKTRTLIYRIAHLIGH-----YGVHPG--EILAVTF-T-NKAAAE 47 usage_00813.pdb 1 -NLLLCA---PTGA-GKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAP-M-RSLVQE 53 a g gkT l e usage_00359.pdb 45 Q----R-LVK----GEVVA-S 55 usage_00419.pdb 43 LYKKVG---FIS--DGQIELY 58 usage_00644.pdb 47 MRHRIGQLMGTSQGGMWVG-- 65 usage_00708.pdb 47 MRERAGHLVPGAGDLWMST-- 65 usage_00710.pdb 47 MRERAGHLVPAGDLWMST--- 64 usage_00711.pdb 47 MRERAGHLVPGAGDLWMST-- 65 usage_00714.pdb 48 MRERAGHLVPGAGDLWMST-- 66 usage_00813.pdb 54 MVGSFGKRLAT-YGITVAE-- 71 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################