################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:36 2021 # Report_file: c_1172_12.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00401.pdb # 2: usage_00412.pdb # 3: usage_01662.pdb # 4: usage_03229.pdb # 5: usage_03341.pdb # 6: usage_03342.pdb # 7: usage_03343.pdb # 8: usage_03344.pdb # 9: usage_03345.pdb # 10: usage_05097.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 55 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 55 ( 72.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00401.pdb 1 --SEL-TLVGTYTS--------GNS-KGIYTFRFN-E--ETGESL-PLSDAE--- 36 usage_00412.pdb 1 SA---RPATVWI-AQD------GSHHL--VRASIDLG-S-----G----SIQLTQ 33 usage_01662.pdb 1 QP---VPATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLSK 36 usage_03229.pdb 1 GR---LPITLWI-VDTNASTPAPAANL--VRMVIDKD-Q-------GNVDITLSN 41 usage_03341.pdb 1 -------ATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLS- 31 usage_03342.pdb 1 -------ATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLSK 32 usage_03343.pdb 1 QP---VPATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLSK 36 usage_03344.pdb 1 QP---VPATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLS- 35 usage_03345.pdb 1 -------ATVWI-QET------GDHQL--AQAQLDRG-S-----G-NSVQMTLSK 32 usage_05097.pdb 1 -----TTLTTL--E-------------GGNLEAKVTMHIKG---RSQEVKAVLSK 32 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################