################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:02 2021 # Report_file: c_0669_51.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00390.pdb # 2: usage_00391.pdb # 3: usage_00393.pdb # 4: usage_00395.pdb # 5: usage_00397.pdb # 6: usage_00534.pdb # 7: usage_00535.pdb # 8: usage_01179.pdb # 9: usage_01180.pdb # 10: usage_01302.pdb # 11: usage_01606.pdb # # Length: 59 # Identity: 2/ 59 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 59 ( 45.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 59 ( 54.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00390.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRIS------------ 43 usage_00391.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISK----------- 44 usage_00393.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRIS------------ 43 usage_00395.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISKR---------- 45 usage_00397.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRIS------------ 43 usage_00534.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISKR---------- 45 usage_00535.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISKRIG-------- 47 usage_01179.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISKRIG-------- 47 usage_01180.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISK----------- 44 usage_01302.pdb 1 --------IAKLVVNSTTLKEFGVRGIS----NNVVDST---G-TAWRVAGKNTGKEIG 43 usage_01606.pdb 1 VVQLEGDNKLVTTFK--NI--KSVTELNGDIITNTMTLGDIVFKRISKRIG-------- 47 klvttfk ni ksVteln tNtmtlg f ris #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################