################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:20 2021 # Report_file: c_1484_120.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00170.pdb # 2: usage_00171.pdb # 3: usage_00172.pdb # 4: usage_00173.pdb # 5: usage_00174.pdb # 6: usage_00175.pdb # 7: usage_02143.pdb # 8: usage_02288.pdb # 9: usage_04018.pdb # # Length: 77 # Identity: 1/ 77 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 77 ( 11.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 77 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00170.pdb 1 ------SRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQEAR 44 usage_00171.pdb 1 ------SRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQEAR 44 usage_00172.pdb 1 ------SRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQAAR 44 usage_00173.pdb 1 ------SRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQAAR 44 usage_00174.pdb 1 -------RRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQEAR 43 usage_00175.pdb 1 ------SRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQEAR 44 usage_02143.pdb 1 ---------TLEGLEELEAYYKKRVKETE-------------L----------KDTDDIS 28 usage_02288.pdb 1 QKRA--QIQKREELLSALIDGTSRLENK---QFPYPG--STGLDDTYMNSLIQYLQERKQ 53 usage_04018.pdb 1 ----RGSRRQIQRLEQLLALYVAEIRRLQEKELDL-SELDDPD---------SAYLQEAR 46 Le lla y usage_00170.pdb 45 LKRKLIRLFGRLCELKD 61 usage_00171.pdb 45 LKRKLIRLFGRLCELK- 60 usage_00172.pdb 45 LKRKLIRLFGRLCELKD 61 usage_00173.pdb 45 LKRKLIRLFGRLCELKD 61 usage_00174.pdb 44 LKRKLIRLFGRLCELK- 59 usage_00175.pdb 45 LKRKLIRLFGRLCELKD 61 usage_02143.pdb 29 VRDALAGKRAELEDSD- 44 usage_02288.pdb 54 IEDKWRASLLKGIQD-- 68 usage_04018.pdb 47 LKRKLIRLFGRLCELKD 63 kl l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################