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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:58 2021
# Report_file: c_1117_33.html
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#====================================
# Aligned_structures: 5
#   1: usage_00133.pdb
#   2: usage_00135.pdb
#   3: usage_00304.pdb
#   4: usage_00440.pdb
#   5: usage_00442.pdb
#
# Length:         97
# Identity:       82/ 97 ( 84.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     83/ 97 ( 85.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 97 ( 14.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00133.pdb         1  DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEA   60
usage_00135.pdb         1  DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEA   60
usage_00304.pdb         1  DVDGLDRTAGAIRGRAARVIHVVTSE-DNYEPGVYTEKVLEATKLLSNTV-PRFTEQVEA   58
usage_00440.pdb         1  DVDGLDRTAGAIRGRAARVIHVVTSE-DN---GVYTEKVLEATKLLSNTV-PRFTEQVEA   55
usage_00442.pdb         1  DVDGLDRTAGAIRGRAARVIHVVTSE-DNYEPGVYTEKVLEATKLLSNTV-PRFTEQVEA   58
                           DVDGLDRTAGAIRGRAARVIHVVTSE DN   GVYTEKVLEATKLLSNTV PRFTEQVEA

usage_00133.pdb        61  AVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVL   97
usage_00135.pdb        61  AVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVL   97
usage_00304.pdb        59  AVEALSSDP-AQPDENEFIDASRLVYDGIRDIRKAVL   94
usage_00440.pdb        56  AVE-A--------DENEFIDASRLVYDGIRDIRKAVL   83
usage_00442.pdb        59  AVEALSS------DENEFIDASRLVYDGIRDIRKAVL   89
                           AVE l        DENEFIDASRLVYDGIRDIRKAVL


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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