################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:00 2021 # Report_file: c_0865_12.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00002.pdb # 2: usage_00093.pdb # 3: usage_00121.pdb # 4: usage_00126.pdb # # Length: 115 # Identity: 30/115 ( 26.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/115 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/115 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ---------QGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVP 51 usage_00093.pdb 1 EGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQ-AGGHAAFVDAGKLLP 59 usage_00121.pdb 1 AGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCE 60 usage_00126.pdb 1 EGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQ-AGGHAAFVDAGKLLP 59 GL gm l yRi QV YL D L e Gv q GGHA FvDa kl p usage_00002.pdb 52 QIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIAR 106 usage_00093.pdb 60 HIPADQFPAQALACELYKVAGIRAVEIGS---------------PAELLRLTI-- 97 usage_00121.pdb 61 HLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIP- 114 usage_00126.pdb 60 HIPADQFPAQALACELYKVAGIRAVEIC----------------PAELLRLTIP- 97 hip DqFPAQala lY G RavEig E RLTI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################