################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:55 2021 # Report_file: c_0378_62.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00212.pdb # 2: usage_00214.pdb # 3: usage_00519.pdb # 4: usage_00521.pdb # 5: usage_00522.pdb # 6: usage_00637.pdb # 7: usage_00638.pdb # 8: usage_00643.pdb # 9: usage_00743.pdb # 10: usage_00762.pdb # 11: usage_00890.pdb # # Length: 98 # Identity: 65/ 98 ( 66.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 98 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 98 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00212.pdb 1 TTPPSVYPLAPGCG-DTTG-SSVTLGCLVKGYFPESVTVTWNSGSL-SSSVHTFPALLQS 57 usage_00214.pdb 1 TTPPSVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 57 usage_00519.pdb 1 --APSVYPLAPVCGDTT-G-SSVTLGCLVKGYFPEPVTLTWNSGSL-SAGVHTFPAVLQS 55 usage_00521.pdb 1 ----SVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 53 usage_00522.pdb 1 TTPPSVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 57 usage_00637.pdb 1 --PPSVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 55 usage_00638.pdb 1 ----SVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 53 usage_00643.pdb 1 TTPPSVYPLAPGCG-DTTG-SSVTLGCLVKGYFPESVTVTWNSGSLS-SSVHTFPALLQS 57 usage_00743.pdb 1 ----SVYPLAPGSA-AQTN-SMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 53 usage_00762.pdb 1 TTPPSVYPLAPGS--AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL-SSGVHTFPAVLQS 57 usage_00890.pdb 1 TTPPSVYPLAPGCG-DTTG-SSVTLGCLVKGYFPESVTVTWNSGSLS-SSVHTFPALLQS 57 SVYPLAPg S VTLGCLVKGYFPE VTvTWNSGSL s VHTFPA LQS usage_00212.pdb 58 ALYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDK-- 93 usage_00214.pdb 58 DLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKK- 94 usage_00519.pdb 56 DLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKI 93 usage_00521.pdb 54 DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK- 90 usage_00522.pdb 58 DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDK-- 93 usage_00637.pdb 56 DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK- 92 usage_00638.pdb 54 DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK- 90 usage_00643.pdb 58 GLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKK- 94 usage_00743.pdb 54 DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK- 90 usage_00762.pdb 58 DLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDK-- 93 usage_00890.pdb 58 GLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDK-- 93 LYT SSSVTVpSStwPS tvTC VAHPASST VDK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################