################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1461_128.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00077.pdb # 2: usage_00293.pdb # 3: usage_00294.pdb # 4: usage_00741.pdb # 5: usage_00742.pdb # 6: usage_01260.pdb # 7: usage_01718.pdb # 8: usage_01719.pdb # 9: usage_01720.pdb # 10: usage_01721.pdb # 11: usage_01723.pdb # 12: usage_01726.pdb # # Length: 16 # Identity: 1/ 16 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 16 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 16 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 -DGMVCSVFES----- 10 usage_00293.pdb 1 -QLFVGNSLVVRLIDA 15 usage_00294.pdb 1 -QLFVGNSLVVRLIDA 15 usage_00741.pdb 1 -QLFVGNSLVVRLIDA 15 usage_00742.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01260.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01718.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01719.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01720.pdb 1 GQLFVGNSLVVRLIDA 16 usage_01721.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01723.pdb 1 -QLFVGNSLVVRLIDA 15 usage_01726.pdb 1 -QLFVGNSLVVRLIDA 15 qlfVgnslvv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################