################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:25 2021 # Report_file: c_0875_78.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00033.pdb # 2: usage_00442.pdb # 3: usage_00543.pdb # 4: usage_00544.pdb # 5: usage_00546.pdb # 6: usage_00548.pdb # 7: usage_00549.pdb # 8: usage_00550.pdb # 9: usage_00551.pdb # 10: usage_00552.pdb # 11: usage_00553.pdb # 12: usage_00554.pdb # 13: usage_00555.pdb # 14: usage_00954.pdb # 15: usage_00955.pdb # # Length: 105 # Identity: 28/105 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/105 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/105 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 EDKHVIRASELVTLVKMELEKETDQIRQLELIDDLQRMGLSDHFQNEFKEILSSIYL-DH 59 usage_00442.pdb 1 --KFLKKKEELIAQVKVLLNTKMEAVKQLELIEDLRNLGLTYYFEDEFKKILTSIYN-EH 57 usage_00543.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00544.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00546.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00548.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00549.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00550.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00551.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00552.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00553.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00554.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00555.pdb 1 -ERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN-EH 58 usage_00954.pdb 1 ---HLMRAAGMIDQVKMMLQEEVDSIRRLELIDDLRRLGISCHFEREIVEILNSKYYTNN 57 usage_00955.pdb 1 ---------GMIDQVKMMLQEEVDSIRRLELIDDLRRLGISCHFEREIVEILNSKYYTNN 51 i qV L LELI DL lG s F E eIL Y usage_00033.pdb 60 HY--YKNPF-PK-EERDLYSTSLAFRLLREHGFQVAQEVFDSFK- 99 usage_00442.pdb 58 KG-F----KNEQ--VGDLYFTSLAFRLLRLHGFDVSEDVFNFFK- 94 usage_00543.pdb 59 KCF---H-NNEVE-KMDLYFTALGFRLLRQHGFNISQDVFNCFK- 97 usage_00544.pdb 59 KCF---H-NNEVE-KMDLYFTALGFRLLRQHGFNISQDVFNCFK- 97 usage_00546.pdb 59 KCF---H--------MDLYFTALGFRLLRQHGFNISQDVFNCFK- 91 usage_00548.pdb 59 KCF---H---------DLYFTALGFRLLRQHGFNISQDVFNCFK- 90 usage_00549.pdb 59 KCF-------------DLYFTALGFRLLRQHGFNISQDVFNCFK- 89 usage_00550.pdb 59 KCF---H-------KMDLYFTALGFRLLRQHGFNISQDVFNCF-- 91 usage_00551.pdb 59 KCF---H---------DLYFTALGFRLLRQHGFNISQDVFNCFK- 90 usage_00552.pdb 59 KCF---H--------MDLYFTALGFRLLRQHGFNISQDVFNCFK- 91 usage_00553.pdb 59 KCF---M---------DLYFTALGFRLLRQHGFNISQDVFNCFK- 90 usage_00554.pdb 59 KC--------------DLYFTALGFRLLRQHGFNISQDVFNCFKN 89 usage_00555.pdb 59 KCF---H---------DLYFTALGFRLLRQHGFNISQDVFNCFK- 90 usage_00954.pdb 58 ----------EI-DERDLYSTALRFRLLRQYDFSVSQEVFDCFK- 90 usage_00955.pdb 52 ----------EI-DERDLYSTALRFRLLRQYDFSVSQEVFDCFK- 84 DLY T L FRLLR F sq VF F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################