################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:42 2021 # Report_file: c_0917_33.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00030.pdb # 2: usage_00529.pdb # 3: usage_00535.pdb # 4: usage_00544.pdb # 5: usage_00559.pdb # 6: usage_00593.pdb # # Length: 70 # Identity: 3/ 70 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 70 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 70 ( 58.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAV--------------ETTTPSKQSNN 46 usage_00529.pdb 1 ----SVFIFPPD-EQLKS---SVVCLLNNFPRE------QWKQSGNSQESVTEQDS-KD- 44 usage_00535.pdb 1 ----SVTLFPP-------------CTITDFYP------------------QPSKQ--SN- 22 usage_00544.pdb 1 ----TVSIFPS-----------VVCFLNNFYPKDI----------GVLNSWTDQDS-KD- 33 usage_00559.pdb 1 ----VAAPSVF-----------VVCLLNNFYPREA------------QESVTEQDS-KD- 31 usage_00593.pdb 1 ----SVFIFPPSDS------ASVVCLLNNFYPREAKVWN--ALSGNSQESVTEQDS-KD- 46 v fp C Fyp t usage_00030.pdb 47 KYAASSYLSL 56 usage_00529.pdb 45 STYSLSSTL- 53 usage_00535.pdb 23 NKYMASS--- 29 usage_00544.pdb 34 STYSMSSTLT 43 usage_00559.pdb 32 STYSLSST-- 39 usage_00593.pdb 47 STYSLSSTL- 55 y Ss #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################