################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:38 2021 # Report_file: c_0039_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00065.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00078.pdb # 5: usage_00080.pdb # # Length: 238 # Identity: 218/238 ( 91.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 218/238 ( 91.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/238 ( 6.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 PTINELERLAAETFGKEAALFVPS-GTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAM 59 usage_00076.pdb 1 PTINELERLAAETFGKEAALFVPSG-T-GNQVS-IAHTQRGDEVILEADSHIFWYEVGAA 57 usage_00077.pdb 1 PTINELERLAAETFGKEAALFVPSG-T-GNQVS-IAHTQRGDEVILEADSHIFWYEVGAA 57 usage_00078.pdb 1 PTINELERLAAETFGKEAALFVPSG-T-GNQVS-IAHTQRGDEVILEADSHIFWYEVGAA 57 usage_00080.pdb 1 PTINELERLAAETFGKEAALFVPS-GTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAM 59 PTINELERLAAETFGKEAALFVPS T GNQVS AHTQRGDEVILEADSHIFWYEVGA usage_00065.pdb 60 AVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 119 usage_00076.pdb 58 -VLSG-VPHPVPGKNGA-DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 114 usage_00077.pdb 58 -VLSG-VPHPVPGKNGA-DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 114 usage_00078.pdb 58 -VLSG-VPHPVPGKNGA-DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 114 usage_00080.pdb 60 AVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 119 VLSG PHPVPGKNGA DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK usage_00065.pdb 120 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSGLCAPVGSVVVGDR 179 usage_00076.pdb 115 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSV-FCLSGLCAPVGSVVVGDR 173 usage_00077.pdb 115 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSV-FCLSGLCAPVGSVVVGDR 173 usage_00078.pdb 115 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSV-FCLSGLCAPVGSVVVGDR 173 usage_00080.pdb 120 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSGLCAPVGSVVVGDR 179 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSV FCLSGLCAPVGSVVVGDR usage_00065.pdb 180 DFIERARKARKM--LGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG 235 usage_00076.pdb 174 DFIERARKARKLGG----GRQAGVLAAAGIIALTK-VDRLKEDHENARFLALKLKEIG 226 usage_00077.pdb 174 DFIERARKARKLGG----GRQAGVLAAAGIIALTK-VDRLKEDHENARFLALKLKEIG 226 usage_00078.pdb 174 DFIERARKARKLGG----GRQAGVLAAAGIIALTK-VDRLKEDHENARFLALKLKEIG 226 usage_00080.pdb 180 DFIERARKARKM--LGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG 235 DFIERARKARK RQAGVLAAAGIIALTK VDRLKEDHENARFLALKLKEIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################