################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:31 2021 # Report_file: c_0545_46.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00036.pdb # 2: usage_00343.pdb # 3: usage_00344.pdb # 4: usage_00754.pdb # 5: usage_00755.pdb # 6: usage_00756.pdb # 7: usage_00757.pdb # 8: usage_00758.pdb # 9: usage_00908.pdb # 10: usage_00997.pdb # 11: usage_00998.pdb # 12: usage_00999.pdb # # Length: 142 # Identity: 6/142 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/142 ( 13.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/142 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -LEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKG-IVPSVVTY 58 usage_00343.pdb 1 -------------------DAVTYNELAGTYARAGFFEEAARCLDT-ASKG-LLPNAFTY 39 usage_00344.pdb 1 -EDYVTRVLEG-RSSGVELSRDTYNTLIAAYGRCGSRTNAFKY-N-ETSAG-FTPCITTY 55 usage_00754.pdb 1 --------------------VVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 39 usage_00755.pdb 1 -LDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKG-IKPNVVTY 58 usage_00756.pdb 1 ---------------------VTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 38 usage_00757.pdb 1 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA-KL-EALKLFEEMVEKG-IKPDVVTY 57 usage_00758.pdb 1 --------------------VVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 39 usage_00908.pdb 1 --------------------KLDMLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMY 40 usage_00997.pdb 1 -LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 58 usage_00998.pdb 1 -LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 58 usage_00999.pdb 1 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTY 59 ty li A g P tY usage_00036.pdb 59 NTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEA-LELFEEMK 117 usage_00343.pdb 40 NTV-TAYGNVGKVDEALALFDQ-KKTGFVPNVNTYNLVLG-LGKKSRFTVLELGE----S 92 usage_00344.pdb 56 NALLNVLSRQGDWSTAQSIVSK-RTKGFKPNEQSYSLLLQCYAKGGNVAGI-AAIENEVY 113 usage_00754.pdb 40 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA-LKLFEEMV 98 usage_00755.pdb 59 STLIDGLCKAGKLDEALKLFE-M--KGIKPNVVTYNTLIDGLCKAGKLDEA-LKLFEE-- 112 usage_00756.pdb 39 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-LDEA-LKLFEEMV 96 usage_00757.pdb 58 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEA-LKLFEEMV 116 usage_00758.pdb 40 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL-C-GKLDEA-LKLFEEMV 96 usage_00908.pdb 41 KDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADA-MNVYEDML 99 usage_00997.pdb 59 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEA-RGFL---- 113 usage_00998.pdb 59 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA-LKLFEEMV 117 usage_00999.pdb 60 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA-LKLFEEMV 118 l l g eA l g P tY usage_00036.pdb 118 EKG------------------- 120 usage_00343.pdb 93 RSGCTPNRVTWNTL-------- 106 usage_00344.pdb 114 G--------------------- 114 usage_00754.pdb 99 EKGIKPDVVTYNTLIDGLCKAG 120 usage_00755.pdb ---------------------- usage_00756.pdb 97 EKGIKPDELTYRRVV------- 111 usage_00757.pdb 117 EKG------------------- 119 usage_00758.pdb 97 EKGIKP-ELTYRRVVESYCRA- 116 usage_00908.pdb 100 KSPDPPEELPFRVLLKGL---- 117 usage_00997.pdb ---------------------- usage_00998.pdb 118 EKG------------------- 120 usage_00999.pdb 119 EKG------------------- 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################