################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:29:16 2021 # Report_file: c_1377_212.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00146.pdb # 2: usage_00150.pdb # 3: usage_00189.pdb # 4: usage_00201.pdb # 5: usage_00203.pdb # 6: usage_00205.pdb # 7: usage_00240.pdb # 8: usage_00388.pdb # 9: usage_00446.pdb # 10: usage_00447.pdb # 11: usage_00501.pdb # 12: usage_00532.pdb # 13: usage_00533.pdb # 14: usage_00613.pdb # 15: usage_00732.pdb # 16: usage_00806.pdb # 17: usage_00807.pdb # 18: usage_00808.pdb # 19: usage_00810.pdb # 20: usage_00811.pdb # 21: usage_00831.pdb # 22: usage_00877.pdb # 23: usage_00878.pdb # 24: usage_00990.pdb # 25: usage_00991.pdb # 26: usage_01091.pdb # 27: usage_01098.pdb # 28: usage_01332.pdb # 29: usage_01439.pdb # 30: usage_01447.pdb # # Length: 37 # Identity: 28/ 37 ( 75.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 37 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 37 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQST- 36 usage_00150.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTI 37 usage_00189.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00201.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTI 37 usage_00203.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTI 37 usage_00205.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTI 37 usage_00240.pdb 1 --IVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 35 usage_00388.pdb 1 ---VHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 34 usage_00446.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 32 usage_00447.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 32 usage_00501.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00532.pdb 1 --IVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 35 usage_00533.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00613.pdb 1 ---VHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 34 usage_00732.pdb 1 DYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 37 usage_00806.pdb 1 --IVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 35 usage_00807.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 32 usage_00808.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00810.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00811.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00831.pdb 1 ---VHPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 33 usage_00877.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00878.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQS-- 31 usage_00990.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_00991.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_01091.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSMI 33 usage_01098.pdb 1 ---VHPLWETWADLVQPDAQDILDTLEDNRNWYQAMI 34 usage_01332.pdb 1 DYIVHPLWETWADLVHPDAQDILDTLEDNREWYQS-- 35 usage_01439.pdb 1 ----HPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 32 usage_01447.pdb 1 DYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQSM- 36 HPLWETWADLV PDAQDILDTLEDNR WYQs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################