################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:00 2021 # Report_file: c_0512_81.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00044.pdb # 2: usage_00045.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00140.pdb # 6: usage_00172.pdb # 7: usage_00173.pdb # # Length: 141 # Identity: 28/141 ( 19.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/141 ( 41.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/141 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 ---SPSQGNIVEKIEECG------NDKIILCDRGTNFGYDNLIVD-LGFSV-KKASKGSP 49 usage_00045.pdb 1 ---SPSQGNIVEKIEECG------NDKIILCDRGTNFGYDNLIVD-LGFSV-KKASKGSP 49 usage_00079.pdb 1 SPS--QMKNIVEKFHEAG------NGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLP 52 usage_00080.pdb 1 SPS--QMKNIVEKFHEAG------NGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLP 52 usage_00140.pdb 1 APH--DMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAI-MRETN-AP 56 usage_00172.pdb 1 SPS--QMKNIVEKFHEAG------NGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLP 52 usage_00173.pdb 1 SPS--QMKNIVEKFHEAG------NGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLP 52 NiveK e g n k ilC RG FGYdNL vD lgf v k P usage_00044.pdb 50 VIFDVTHSL-Q-------R-AQVTELARSGLAVGIAGLFLE-AHPNPNQAKCDGPSALPL 99 usage_00045.pdb 50 VIFDVTHSL-Q-------R-AQVTELARSGLAVGIAGLFLE-AHPNPNQAKCDGPSALPL 99 usage_00079.pdb 53 VIFDVTHSL-A----GG-RRAQALDLALAGMATRLAGLFLEL------------------ 88 usage_00080.pdb 53 VIFDVTHSL-Q-------RRAQALDLALAGMATRLAGLFLE-SH--------------PL 89 usage_00140.pdb 57 VVFDATHSV-QLPG--GQR-EFVPVLARAAVATGVAGLFME-THPNPAEAKSDGPNAVPL 111 usage_00172.pdb 53 VIFDVTHSLQT---R---RRAQALDLALAGMATRLAGLFLE-SH------------ALPL 93 usage_00173.pdb 53 VIFDVTHSLQT---RGG-RRAQALDLALAGMATRLAGLFLE-S----------------- 90 ViFDvTHSl R aq LA g A AGLFlE usage_00044.pdb 100 SALEGFVSQ-KAIDDLVKSF- 118 usage_00045.pdb 100 SALEGFVSQ-KAIDDLVKSF- 118 usage_00079.pdb 89 HLLEDFLIRIKALDDLIKSQ- 108 usage_00080.pdb 90 HLLEDFLIRIKALDDLIKSQP 110 usage_00140.pdb 112 NRMGALLETLVTLDQAV---- 128 usage_00172.pdb 94 HLLEDFLIRIKALDDLIKSQ- 113 usage_00173.pdb 91 HLLEDFLIRIKALDDLIKSQP 111 le f ka Ddl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################