################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:21 2021 # Report_file: c_1429_46.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00470.pdb # 2: usage_00474.pdb # 3: usage_00651.pdb # 4: usage_00665.pdb # 5: usage_01482.pdb # 6: usage_01623.pdb # # Length: 76 # Identity: 4/ 76 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 76 ( 30.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 76 ( 55.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00470.pdb 1 GGLS-----------NESQLR------AQGAEDKDE---VAEVPRVRKAAGF-PP-LVTP 38 usage_00474.pdb 1 --------PGGMLSNMESQLR------AQGAEDKM-DEVMAEVPRVRKAAGF-PP-LVTP 43 usage_00651.pdb 1 --------PGGMLSNMESQLR------AQGAEDKM-DEVMAEVPRVRKAAGF-PP-LVTP 43 usage_00665.pdb 1 ----LPWL------SPEVLQQNLQGYD-----AKS-DIYSVGITACELANGHVPFDM--P 42 usage_01482.pdb 1 --------PGGMISNLSNQLK------EQGALDRM-DAVLDEIPRVREDLGY-PP-LVTP 43 usage_01623.pdb 1 --------PGGMLSNMESQLR------AQGAEDKM-DEVMAEVPRVRKAAGF-PP-LVTP 43 e ql dk e prvr a G Pp l P usage_00470.pdb 39 SSQIVGTQAVFNV--- 51 usage_00474.pdb 44 SSQIVGTQAVFNVM-- 57 usage_00651.pdb 44 SSQIVGTQAVFNVM-- 57 usage_00665.pdb 43 ATQMLLEK-------- 50 usage_01482.pdb 44 TSQIVGTQAVLNVMTG 59 usage_01623.pdb 44 SSQIVGTQAVFNVM-- 57 sQivgtq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################