################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:31 2021 # Report_file: c_0217_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00062.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00163.pdb # 7: usage_00164.pdb # 8: usage_00169.pdb # # Length: 129 # Identity: 26/129 ( 20.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/129 ( 28.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/129 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 ---QPFTIYGNTHYVGTGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVK 57 usage_00076.pdb 1 ---PPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTK 57 usage_00077.pdb 1 SPQQPFTIYGNTHYVGTGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVK 60 usage_00078.pdb 1 ---PPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTK 57 usage_00079.pdb 1 ---PPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTK 57 usage_00163.pdb 1 ---PPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTK 57 usage_00164.pdb 1 ---PPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTK 57 usage_00169.pdb 1 ---EPFQLIDNIYYVGTDGIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIK 57 PF i gN YVGT l p G IL e a I GFK sD K usage_00062.pdb 58 YILSTHSHEDHAGGISAMQKLTGATVLAGAANVDTLRTGVSPKS-DPQFG---S-NFPGS 112 usage_00076.pdb 58 ILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGG--KSDFHYANDSST-YFTQS 114 usage_00077.pdb 61 YILSTHSHEDHAGGISAMQKLTGATVLAGAANVDTLRTGVSPKS-DPQFGS--LSNFPGS 117 usage_00078.pdb 58 ILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGG--KSDFHYANDSST-YFTQS 114 usage_00079.pdb 58 ILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGG--KSDFHYANDSST-YFTQS 114 usage_00163.pdb 58 ILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGG--KSDFHYANDSST-YFTQS 114 usage_00164.pdb 58 ILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGG--KSDFHYANDSST-YFTQS 114 usage_00169.pdb 58 LILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYP----GDEKNEDL-AFPAV 112 L H H DHa G T A v G F s usage_00062.pdb 113 AK--VRAVA 119 usage_00076.pdb 115 TVDKVLHD- 122 usage_00077.pdb 118 AK--VRAVA 124 usage_00078.pdb 115 TVDKVLHD- 122 usage_00079.pdb 115 TVDKVLHD- 122 usage_00163.pdb 115 TVDKVLHD- 122 usage_00164.pdb 115 TVDKVLHD- 122 usage_00169.pdb 113 KVDRAVKE- 120 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################