################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:22:30 2021 # Report_file: c_0168_19.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00083.pdb # 2: usage_00084.pdb # 3: usage_00095.pdb # 4: usage_00100.pdb # 5: usage_00101.pdb # 6: usage_00102.pdb # 7: usage_00103.pdb # 8: usage_00171.pdb # 9: usage_00228.pdb # 10: usage_00233.pdb # # Length: 167 # Identity: 15/167 ( 9.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/167 ( 25.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/167 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00084.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00095.pdb 1 HLAILRTLSKAFA---LAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQ 56 usage_00100.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00101.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00102.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00103.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALD-- 54 usage_00171.pdb 1 -LVVTRTMSKAFAFAG---GRLGYLIA-TPAVIDAMLLVRLPYHLSSVTQAAARAALR-- 53 usage_00228.pdb 1 CLFIIRAMTKFFA---MPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLK-- 55 usage_00233.pdb 1 NLAVIRTFSKAFS---LAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQ-FAKVALD-- 53 L Rt sKaF R Gy a i v P s A aL usage_00083.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00084.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00095.pdb 57 GIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILAR-FK----ASSAVFKSLW 111 usage_00100.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00101.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00102.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00103.pdb 55 HREIFEERTKFIVEERERMKSALREMG-Y-RITDSRGNFVFVF-MEKE--EKERLLEHLR 109 usage_00171.pdb 54 HSDDTLSSVAALIAERERVTTSLNDMG-F-RVIPSDANFVLFGEFA----DAPAAWRRYL 107 usage_00228.pdb 56 DTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCR-LE--NISGEKLYDSLL 112 usage_00233.pdb 54 HREIFEERTKFIVEERERK-SALR-EG-Y-RITDSRGNFVFVFEKE----EKERLLEHLR 105 e i ERer L g r s Nfv l usage_00083.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00084.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00095.pdb 112 DQGIILRD--QNKQPSL--SGCLRITVGTREESQRVIDAL------- 147 usage_00100.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00101.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00102.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00103.pdb 110 TKNVAVRS--FR-------E-GVRITIGKREENDMILRELEVF---- 142 usage_00171.pdb 108 EAGILIRDVGIP-------G-YLRATTGLAEENDAFLRASARIATDL 146 usage_00228.pdb 113 KEDIVIRR--CCNFIGLDDS-FVRFAIKDEKKNTKFLRALKGVENNL 156 usage_00233.pdb 106 TKNVAVRS--FR-------E-GVRITIGKREEND-ILRELEVF---- 137 R R t g een lr l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################