################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:11 2021 # Report_file: c_1486_113.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00384.pdb # 2: usage_01018.pdb # 3: usage_01232.pdb # 4: usage_01613.pdb # 5: usage_01679.pdb # 6: usage_01778.pdb # 7: usage_02125.pdb # 8: usage_02145.pdb # # Length: 35 # Identity: 2/ 35 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 35 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 35 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00384.pdb 1 RSTDIRNALIEGKDISTYTTPTVSELLLN------ 29 usage_01018.pdb 1 SSTLVREIAALGGDISKFVHPAVADALAERFK--- 32 usage_01232.pdb 1 -GTIVREIAQLGGDVSKFVFPSVEKWLTEKVAAMA 34 usage_01613.pdb 1 SSTLVREIAALGGDISKFVHPAVADALAERFK--- 32 usage_01679.pdb 1 ----IREIARLKGDVTKFVPQAVVEAFERKHQQ-- 29 usage_01778.pdb 1 SGTIVREIAQLGGDVSKFVFPSVEKWLTEKVAAMA 35 usage_02125.pdb 1 -SSLVKEVALYGGDVTEWVPPEVARALNEKLK--- 31 usage_02145.pdb 1 SSTLVREIAALGGDISKFVHPAVADALAERFK--- 32 re a ggD v p V l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################