################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:50 2021 # Report_file: c_0462_148.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00034.pdb # 2: usage_00039.pdb # 3: usage_00077.pdb # 4: usage_00090.pdb # 5: usage_00171.pdb # 6: usage_00172.pdb # 7: usage_00814.pdb # # Length: 86 # Identity: 4/ 86 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 86 ( 15.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 86 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 QRGIVWVVDDDSSIRWVLERALAGA--GLTCTTFENGNEVLAALASKTP-DVLLSDIRM- 56 usage_00039.pdb 1 --ATLLIIDDDEVVRESLAAYLEDS--NFKVLQALNGLQGLQIFESEQP-DLVICDLRP- 54 usage_00077.pdb 1 --ATLLIIDDDEVVRESLAAYLEDS--NFKVLQALNGLQGLQIFESEQP-DLVICDLRP- 54 usage_00090.pdb 1 ---KVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESV-DIAILDVE-M 55 usage_00171.pdb 1 ---KILIVEDDTDAREWLSTIISNH--FPEVWSAGDGEEGERLFGLHAP-DVIITDIRP- 53 usage_00172.pdb 1 ---KILIVEDDTDAREWLSTIISNH--FPEVWSAGDGEEGERLFGLHAP-DVIITDIRP- 53 usage_00814.pdb 1 --PSVFLIDDDRDLRKAMQQTLELA--GFTVSSFASATEALAGLS-ADFAGIVISDIRM- 54 Dd R v g d i D r usage_00034.pdb 57 PGMDGLAL-LKQIKQRHPMLPVIIM- 80 usage_00039.pdb 55 --QIDGLELIRRIRQTASETPIIVL- 77 usage_00077.pdb 55 --QIDGLELIRRIRQTASETPIIVLS 78 usage_00090.pdb 56 P-VKTGLEVLEWIRSEKLETKVVVVT 80 usage_00171.pdb 54 --KLGGLE-LDRIKAGGAKPYVIVIS 76 usage_00172.pdb 54 --KLGGLE-LDRIKAGGAKPYVIVIS 76 usage_00814.pdb 55 P-GMDGLALFRKILALDPDLPMILVT 79 gl I i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################