################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:57:11 2021 # Report_file: c_1234_41.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00138.pdb # 2: usage_00140.pdb # 3: usage_00141.pdb # 4: usage_00142.pdb # 5: usage_00274.pdb # 6: usage_00275.pdb # 7: usage_00279.pdb # 8: usage_00281.pdb # 9: usage_00283.pdb # 10: usage_00288.pdb # 11: usage_00292.pdb # 12: usage_00293.pdb # 13: usage_00294.pdb # 14: usage_00597.pdb # 15: usage_00600.pdb # 16: usage_00857.pdb # 17: usage_00860.pdb # 18: usage_00986.pdb # 19: usage_00988.pdb # 20: usage_00989.pdb # 21: usage_01263.pdb # 22: usage_01264.pdb # 23: usage_01265.pdb # # Length: 47 # Identity: 25/ 47 ( 53.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 47 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 47 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00140.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00141.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00142.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00274.pdb 1 --------MHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHH- 38 usage_00275.pdb 1 --------MHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLH-- 37 usage_00279.pdb 1 ------SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHH- 40 usage_00281.pdb 1 ------SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHH- 40 usage_00283.pdb 1 ------SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 41 usage_00288.pdb 1 ------SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLH-- 39 usage_00292.pdb 1 --------MHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 39 usage_00293.pdb 1 --------MHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 39 usage_00294.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLH-- 42 usage_00597.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00600.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00857.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00860.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00986.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00988.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_00989.pdb 1 DNG---SGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHA 44 usage_01263.pdb 1 ---DNG-TGHCHQSLWKDGKPLFYDEKNYGGLSDLARWYIGGLIKHS 43 usage_01264.pdb 1 ---------HCHQSLWKDGKPLFY--KNYGGLSDLARWYIGGLIKHS 36 usage_01265.pdb 1 ---DNG-TGHCHQSLWKDGKPLFYDEKNYGGLSDLARWYIGGLIKHS 43 HCHQSLWKDG PL Y Y GLSD AR YIGGL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################