################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:32 2021 # Report_file: c_0836_38.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00225.pdb # 4: usage_00258.pdb # 5: usage_00259.pdb # 6: usage_00303.pdb # 7: usage_00304.pdb # 8: usage_00368.pdb # 9: usage_00369.pdb # 10: usage_00445.pdb # 11: usage_00446.pdb # 12: usage_00447.pdb # 13: usage_00448.pdb # 14: usage_00449.pdb # 15: usage_00450.pdb # 16: usage_00500.pdb # # Length: 67 # Identity: 3/ 67 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 67 ( 9.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 67 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE-GRTCIVIAHRLS 59 usage_00061.pdb 1 SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE-GRTCIVIAHRLS 59 usage_00225.pdb 1 SGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQR 60 usage_00258.pdb 1 -GGQKQRIAIARALYLEPEILVLDQATSALDTQSEAKIMDEIYKISK-DKTMIIIAHRLS 58 usage_00259.pdb 1 --GQKQRIAIARALYLEPEILVLDQATSALDTQSEAKIMDEIYKISK-DKTMIIIAHRLS 57 usage_00303.pdb 1 -GGQRQRISIARALLKNAPVLIFDE----------------LESLTK-SCTTIVIAHRLS 42 usage_00304.pdb 1 SGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLA 60 usage_00368.pdb 1 SGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA-NRTTIVVAHRLS 59 usage_00369.pdb 1 SGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA-NRTTIVVAHRLS 59 usage_00445.pdb 1 SGGQKQRIAIARALVRNPKILLLDQATSALDTESEAVVQAALDKARE-GRTTIVIAHRLS 59 usage_00446.pdb 1 SGGQKQRIAIARALVRQPHILLLDQATSALDTESEKVVQEALDKARE-GRTCIVIAHRLS 59 usage_00447.pdb 1 SGGQKQRIAIARALVRQPHILLLDQATSALDTESEKVVQEALDKARE-GRTCIVIAHRLS 59 usage_00448.pdb 1 SGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE-GRTTIVIAHRLS 59 usage_00449.pdb 1 SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE-GRTCIVIAHRLS 59 usage_00450.pdb 1 SGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE-GRTTIVIAHRLS 59 usage_00500.pdb 1 SGGE-QQLAIGRAL-SRPKLL--DEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNAL 56 G qr I D h usage_00060.pdb 60 TIQNA-- 64 usage_00061.pdb 60 TIQNA-- 64 usage_00225.pdb 61 ILDYIK- 66 usage_00258.pdb 59 TITQC-D 64 usage_00259.pdb 58 TITQC-- 62 usage_00303.pdb 43 TVENA-- 47 usage_00304.pdb 61 VLDYL-- 65 usage_00368.pdb 60 TVVNA-- 64 usage_00369.pdb 60 TVVNA-- 64 usage_00445.pdb 60 TVRNA-- 64 usage_00446.pdb 60 TIQNA-- 64 usage_00447.pdb 60 TIQNA-- 64 usage_00448.pdb 60 TVRNA-- 64 usage_00449.pdb 60 TIQNA-- 64 usage_00450.pdb 60 TVRNA-- 64 usage_00500.pdb 57 GALKVA- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################