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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:01:34 2021
# Report_file: c_1394_169.html
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#====================================
# Aligned_structures: 5
#   1: usage_00001.pdb
#   2: usage_00172.pdb
#   3: usage_00316.pdb
#   4: usage_00959.pdb
#   5: usage_00962.pdb
#
# Length:         98
# Identity:        3/ 98 (  3.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     14/ 98 ( 14.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           49/ 98 ( 50.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  --QALRHGVLV--AR--------AVVIAFVVCWLPYHVRRLMFCYI----SDEQWTTFLF   44
usage_00172.pdb         1  -----------EPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPA-MCA--   46
usage_00316.pdb         1  RSSENVALLKT--VI--------IVLSVFIACWAPLFILLLLDVGC----KVKT--CDI-   43
usage_00959.pdb         1  ---NLRRITRL--VL--------VVVAVFVVCWTPIHIFILVEALG----S--A--A---   36
usage_00962.pdb         1  --RNLRRITRM--VL--------VVVAVFIVCWTPIHIYVIIKALI----TIP---ETT-   40
                                                   V  vF vcw P h                       

usage_00001.pdb        45  DFYHYFYMLTNALAYASSAINPILYNL-------VSAN   75
usage_00172.pdb        47  -----FNDRVYATYQVTRGLASLNSCVNPILYFLAG--   77
usage_00316.pdb        44  --LF-RAEYFLVLAVLNSGTNPIIYTL-----------   67
usage_00959.pdb        37  ---LSSYYFCIALGYTNSSLNPILYAF-----------   60
usage_00962.pdb        41  -FQTVSWHFCIALGYTNSCLNPVLYAF-----------   66
                                      al    s  np  y             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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