################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:58 2021 # Report_file: c_0621_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00095.pdb # 3: usage_00096.pdb # 4: usage_00182.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # 7: usage_00233.pdb # # Length: 83 # Identity: 13/ 83 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 83 ( 48.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 83 ( 39.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 TYEQYLEYLT---CVHDRDNEELIKFSHFDNNSSGFLTKNQ-KNILTTWGDALT-EQEAN 55 usage_00095.pdb 1 -------------VEELI-----KMFAHFDNNCTGYLTKSQMKNILTTWGDALT-DQEAI 41 usage_00096.pdb 1 -------------VEELI-----KMFAHFDNNCTGYLTKSQMKNILTTWGDALT-DQEAI 41 usage_00182.pdb 1 ----------DYDVQKLK-----AAFLHLD---KGNITKLQLRKGLERSG-LMLPP-NFD 40 usage_00196.pdb 1 -----------------------KMFSHFDNNSSGFLTKNQMKNILTTWGDALT-EQEAN 36 usage_00197.pdb 1 -----------------I-----KMFSHFDNNSSGFLTKNQMKNILTTWGDALT-EQEAN 37 usage_00233.pdb 1 -----------------------KMFAHFDNNCTGYLTKSQMKNILTTWGDALT-DQEAI 36 F HfD G lTK Q kniLttwG alt ea usage_00002.pdb 56 DALNAFSSEDRINYKLFCEDI-- 76 usage_00095.pdb 42 DALNAFSSEDNIDYKLFCEDILQ 64 usage_00096.pdb 42 DALNAFSSEDNIDYKLFCEDILQ 64 usage_00182.pdb 41 LLLDQID-SGNIDYTEFLAAAI- 61 usage_00196.pdb 37 DALNAFSSEDRINYKLFCEDILS 59 usage_00197.pdb 38 DALNAFSSEDRINYKLFCEDILS 60 usage_00233.pdb 37 DALNAFSSEDNIDYKLFCEDILQ 59 daLnafs ed I YklFcedi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################