################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:36 2021 # Report_file: c_0545_116.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00211.pdb # 2: usage_00212.pdb # 3: usage_00213.pdb # 4: usage_00359.pdb # 5: usage_00360.pdb # 6: usage_00361.pdb # 7: usage_00362.pdb # 8: usage_00372.pdb # 9: usage_00373.pdb # 10: usage_00374.pdb # 11: usage_00375.pdb # 12: usage_00870.pdb # 13: usage_00871.pdb # 14: usage_00961.pdb # # Length: 129 # Identity: 63/129 ( 48.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/129 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/129 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00211.pdb 1 -SDTLEQLYSLAFNQYQSGY-EDA-HVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIH 57 usage_00212.pdb 1 SSDTLEQLYSLAFNQYQSGY-EDA-HVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIH 58 usage_00213.pdb 1 ---TLEQLYSLAFNQYQSGY-EDA-HVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIH 55 usage_00359.pdb 1 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 60 usage_00360.pdb 1 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 60 usage_00361.pdb 1 -EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 59 usage_00362.pdb 1 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 60 usage_00372.pdb 1 STDTLEQLYTLGFNQYHAGKHDEAHKIFQALCVLDHYEARFFLGLGACRQALGQFRLAID 60 usage_00373.pdb 1 STDTLEQLYTLGFNQYHAGKHDEAHKIFQALCVLDHYEARFFLGLGACRQALGQFRLAID 60 usage_00374.pdb 1 STDTLEQLYTLGFNQYHAGKHDEAHKIFQALCVLDHYEARFFLGLGACRQALGQFRLAID 60 usage_00375.pdb 1 STDTLEQLYTLGFNQYHAGKHDEAHKIFQALCVLDHYEARFFLGLGACRQALGQFRLAID 60 usage_00870.pdb 1 --DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 58 usage_00871.pdb 1 -EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQ 59 usage_00961.pdb 1 ---TLEQLYSLAFNQYQSGKYEDAHKVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIH 57 TLEQLY L FNQY G A FQALC LDHY R FLGLGACRQ G A usage_00211.pdb 58 SYSYGAVMDI-EPRFPFHAAECLLQ-GELAEAESGLFLAQELIANP---EFELSTRVSSM 112 usage_00212.pdb 59 SYSYGAVMDI-EPRFPFHAAECLLQ-GELAEAESGLFLAQELIANP---EFELSTRVSSM 113 usage_00213.pdb 56 SYEEGAVMDI-EPRFPFHAAECLLQ-GELAEAESGLFLAQELIANP---EFELSTRVSSM 110 usage_00359.pdb 61 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 119 usage_00360.pdb 61 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 119 usage_00361.pdb 60 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 118 usage_00362.pdb 61 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 119 usage_00372.pdb 61 SYSYGA--DLQEPRFPFHAAECLLQLGELEGAESGFHSAQLLAAAKPEL-AELAARAGIL 117 usage_00373.pdb 61 SYSYGA--DLQEPRFPFHAAECLLQLGELEGAESGFHSAQLLAAAKPEL-AELAARAGIL 117 usage_00374.pdb 61 SYSYGA--DLQEPRFPFHAAECLLQLGELEGAESGFHSAQLLAAAKPEL-AELAARAGIL 117 usage_00375.pdb 61 SYSYGA--DLQEPRFPFHAAECLLQLGELEGAESGFHSAQLLAAAKPEL-AELAARAGIL 117 usage_00870.pdb 59 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 117 usage_00871.pdb 60 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH-EALAARAGAM 118 usage_00961.pdb 58 SYSYGAVMDIKEPRFPFHAAECLLQKGELAEAESGLFLAQELIANKPEF-KELSTRVSSM 116 SYsyGA D EPRFPFHAAEC LQ G L AESG A L A L R usage_00211.pdb 113 LEAI----- 116 usage_00212.pdb 114 LEAI----- 117 usage_00213.pdb 111 LEAI----- 114 usage_00359.pdb 120 LEAVTARKD 128 usage_00360.pdb 120 LEAVTA--- 125 usage_00361.pdb 119 LEAVTAR-- 125 usage_00362.pdb 120 LEAV----- 123 usage_00372.pdb 118 EVVKTKKDE 126 usage_00373.pdb 118 EVVKTKKD- 125 usage_00374.pdb 118 EVVKTKKD- 125 usage_00375.pdb 118 EVVKTKKD- 125 usage_00870.pdb 118 LEAVTARKD 126 usage_00871.pdb 119 L-------- 119 usage_00961.pdb 117 LEAIKLKKE 125 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################