################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:14 2021 # Report_file: c_0617_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00205.pdb # 2: usage_00230.pdb # 3: usage_00231.pdb # 4: usage_00232.pdb # 5: usage_00276.pdb # # Length: 122 # Identity: 25/122 ( 20.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/122 ( 64.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/122 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00205.pdb 1 KEDFLYYLTESLVTGTR-------GYAKIPAAKFVIGLPSNNDAAA-TGYVVNKQAVYNA 52 usage_00230.pdb 1 TADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGY-ISPTEMKKA 59 usage_00231.pdb 1 TADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGY-ISPTEMKKA 59 usage_00232.pdb 1 TADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGY-ISPTEMKKA 59 usage_00276.pdb 1 TADYEVAMADMLLHGFPIGGNANNMFPALRSDQVMIGLPATPAAAPSGGY-ISPTEMKKA 59 taDyevamadmLlhGfp fpalrsdqvmIGLPa paAAp gGY isptemkkA usage_00205.pdb 53 FSRLDAKN---------------LSIKGLMTWSINWDNGKSKAGVAYNWEFKTRY----- 92 usage_00230.pdb 60 LNYIIKG-VPFGGKYKLSNQSGYPAFRGLMSWSINWDAK-------NNFEFSNNYRTYFD 111 usage_00231.pdb 60 LNYIIKG-VPFGGKYKLSNQSGYPAFRGLMSWSINWDAK-------NNFEFSNNYRTYFD 111 usage_00232.pdb 60 LNYIIKG-VPFGGKYKLSNQSGYPAFRGLMSWSINWDAK-------NNFEFSNNYRTYFD 111 usage_00276.pdb 60 LDYIIKG-IPFGGKYKLSNESGYPAFRGLMSWSINWDAK-------NNFEFSSNYRTYFD 111 l yiikg pafrGLMsWSINWDak nNfEFs nY usage_00205.pdb -- usage_00230.pdb 112 GL 113 usage_00231.pdb 112 GL 113 usage_00232.pdb 112 GL 113 usage_00276.pdb 112 AI 113 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################