################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:39 2021 # Report_file: c_0042_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00004.pdb # 2: usage_00012.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00040.pdb # 8: usage_00041.pdb # 9: usage_00047.pdb # 10: usage_00054.pdb # 11: usage_00055.pdb # 12: usage_00056.pdb # 13: usage_00057.pdb # 14: usage_00071.pdb # 15: usage_00082.pdb # # Length: 154 # Identity: 65/154 ( 42.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/154 ( 70.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/154 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00012.pdb 1 -YVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 57 usage_00025.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00026.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00038.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00039.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00040.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00041.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00047.pdb 1 NYDQNYQ-TGGQVSYSPSN-TGFSVNW---NTQDDFVVGVGWTTGSSAPINFGGSFSVNS 55 usage_00054.pdb 1 DYVQNYNGDV--ADFQYNEGAGTYTCGW--DGSTDFVVGLGWSTGAARDITYSATYNAGG 56 usage_00055.pdb 1 DYVQNYNGDV--ADFQYNEGAGTYTCGW--DGSTDFVVGLGWSTGAARDITYSATYNAGG 56 usage_00056.pdb 1 DYVQNYNGDV--ADFQYNEGAGTYTCGW--DGSTDFVVGLGWSTGAARDITYSATYNAGG 56 usage_00057.pdb 1 DYVQNYNGDV--ADFQYNEGAGTYTCGW--DGSTDFVVGLGWSTGAARDITYSATYNAGG 56 usage_00071.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSNFVVGLGWTTGSSNAITYSAEYSASG 58 usage_00082.pdb 1 NYVQNYNGNL--GDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASG 58 YvQNYn df y e aGt s dFVVGlGW TG Itysa y a g usage_00004.pdb 59 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00012.pdb 58 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 117 usage_00025.pdb 59 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00026.pdb 59 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00038.pdb 59 SASYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00039.pdb 59 SASYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00040.pdb 59 SASYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00041.pdb 59 SASYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00047.pdb 56 GTGLLSVYGWSTNPLVEYYIMEDNHNYP--AQGTVKGTVTSDGATYTIWENTRVNEPSIQ 113 usage_00054.pdb 57 SGSYLAVYGWVNSPQAEYYIVESYGDYNPCSNAEGLGTLESDGSTYTVCTDTRTNEPSIT 116 usage_00055.pdb 57 SGSYLAVYGWVNSPQAEYYIVESYGDYNPCSNAEGLGTLESDGSTYTVCTDTRTNEPSIT 116 usage_00056.pdb 57 SGSYLAVYGWVNSPQAEYYIVESYGDYNPCSNAEGLGTLESDGSTYTVCTDTRTNEPSIT 116 usage_00057.pdb 57 SGSYLAVYGWVNSPQAEYYIVESYGDYNPCSNAEGLGTLESDGSTYTVCTDTRTNEPSIT 116 usage_00071.pdb 59 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 usage_00082.pdb 59 SSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSIT 118 s syLaVYGWvn PqaEYYIvE ygdYn s a lGT SDGsTY vctdTRtNEPSIt usage_00004.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHG 152 usage_00012.pdb 118 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHG 151 usage_00025.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHG 152 usage_00026.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHG 152 usage_00038.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAHHG 152 usage_00039.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAHHG 152 usage_00040.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAHHG 152 usage_00041.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAHHG 152 usage_00047.pdb 114 GTATFNQYISVRNSPRTSGTVTVQNHFNAWASLG 147 usage_00054.pdb 117 GTSTFTQYWSVRQSERTSGTVTVGNHFNYWAQHG 150 usage_00055.pdb 117 GTSTFTQYWSVRQSERTSGTVTVGNHFNYWAQHG 150 usage_00056.pdb 117 GTSTFTQYWSVRQSERTSGTVTVGNHFNYWAQHG 150 usage_00057.pdb 117 GTSTFTQYWSVRQSERTSGTVTVGNHFNYWAQHG 150 usage_00071.pdb 119 GTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHG 152 usage_00082.pdb 119 GTSTFTQYWSVRESTRTSGTVTVANHFNFWAQHG 152 GTsTFtQY SVR S RTSGTVTV NHFN WA hG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################