################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:34 2021 # Report_file: c_1488_63.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_01643.pdb # 2: usage_01644.pdb # 3: usage_01645.pdb # 4: usage_02207.pdb # 5: usage_02208.pdb # 6: usage_02958.pdb # 7: usage_03835.pdb # 8: usage_03836.pdb # 9: usage_03837.pdb # 10: usage_04064.pdb # 11: usage_04065.pdb # 12: usage_04066.pdb # 13: usage_04067.pdb # 14: usage_07820.pdb # 15: usage_07821.pdb # 16: usage_07822.pdb # # Length: 38 # Identity: 5/ 38 ( 13.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 38 ( 63.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 38 ( 34.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01643.pdb 1 --LQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 36 usage_01644.pdb 1 --LQVYQQARLSNPELRKSAADRDAAF----------- 25 usage_01645.pdb 1 --LQVYQQARLSNPELRKSAADRDAAF----------- 25 usage_02207.pdb 1 NLMQVYQQARLSNPELRKSAADRDAAFEKINEAR---- 34 usage_02208.pdb 1 NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 38 usage_02958.pdb 1 -LMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 37 usage_03835.pdb 1 --MQVYQQARLSNPELRKSAADRDAAFEKINEARS--- 33 usage_03836.pdb 1 --MQVYQQARLSNPELRKSAADRDAAFEKINEARS--- 33 usage_03837.pdb 1 --MQVYQQARLSNPELRKSAADRDAAFEKINEARS--- 33 usage_04064.pdb 1 -LMQVYQQARLSNPELRKSAADRDAAFE---------- 27 usage_04065.pdb 1 -LMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 37 usage_04066.pdb 1 -LMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 37 usage_04067.pdb 1 -VNALLKEAENRNLSLLQARLSQDLAREQIRQAQDGHL 37 usage_07820.pdb 1 NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 38 usage_07821.pdb 1 NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLL 38 usage_07822.pdb 1 -LMQVYQQARLSNPELRKSAADRDAAFEKI-------- 29 qvyqqArlsNpeLrksaadrDaAf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################