################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:08 2021 # Report_file: c_1429_155.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00207.pdb # 2: usage_00560.pdb # 3: usage_00561.pdb # 4: usage_01084.pdb # 5: usage_01688.pdb # # Length: 98 # Identity: 7/ 98 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 98 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 98 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00207.pdb 1 --TSAAAPLAAGVYTLLLEANP---------NLTWRDVQYLSILSAVGL-E--------- 39 usage_00560.pdb 1 -GTSMAAPHAAGIAAMLKAAHP---------EWSPSAIRSAMMTTADPLD-NTRKPIKDS 49 usage_00561.pdb 1 --TSMAAPHAAGIAAMLKAAHP---------EWSPSAIRSAMMTTADPLD---RKPIKDS 46 usage_01084.pdb 1 --TAMATPHVAGIAALLLQAHP---------SWTPDKVKTALIETADIV-K--------- 39 usage_01688.pdb 1 T---SSAPLVAGI-GLLQKQYETQYPDTPSE--RLDLAKKVLS-SATALYD--------E 45 aaP AGi L a p A l usage_00207.pdb 40 KNADGDWRDSAMGKK---YSHRYGFGKIDAHKLIEMSK 74 usage_00560.pdb 50 D-NNKAAT-----------PLDMGAGHVDPNRALDP-- 73 usage_00561.pdb 47 D-NNKAAT-----------PLDMGAGHVDPNRALDP-- 70 usage_01084.pdb 40 -P-------------DEIADIAYGAGRVNAYKAAYY-- 61 usage_01688.pdb 46 D-EKAYFS-----------PRQQGAGAVDAKKASAA-- 69 GaG vd a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################