################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:24 2021 # Report_file: c_1095_11.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00292.pdb # 2: usage_00293.pdb # 3: usage_00294.pdb # 4: usage_00295.pdb # 5: usage_00296.pdb # 6: usage_00297.pdb # 7: usage_00298.pdb # 8: usage_00299.pdb # 9: usage_00300.pdb # 10: usage_00301.pdb # 11: usage_00302.pdb # 12: usage_00515.pdb # 13: usage_00516.pdb # 14: usage_00652.pdb # 15: usage_00653.pdb # 16: usage_00654.pdb # 17: usage_00655.pdb # # Length: 97 # Identity: 84/ 97 ( 86.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/ 97 ( 86.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 97 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00292.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00293.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00294.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00295.pdb 1 --------KHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 52 usage_00296.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00297.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00298.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00299.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00300.pdb 1 GQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQG-RPVINEESLPYDIP 59 usage_00301.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00302.pdb 1 --------KHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 52 usage_00515.pdb 1 ----------DIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 50 usage_00516.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00652.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00653.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 usage_00654.pdb 1 ---SRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 57 usage_00655.pdb 1 ------SIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIP 54 DIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQG RPVINEESLPYDIP usage_00292.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRT- 90 usage_00293.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00294.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00295.pdb 53 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTF 89 usage_00296.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00297.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTF 91 usage_00298.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRT- 90 usage_00299.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTF 91 usage_00300.pdb 60 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRT- 95 usage_00301.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00302.pdb 53 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRT- 88 usage_00515.pdb 51 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 85 usage_00516.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00652.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR-- 89 usage_00653.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTF 91 usage_00654.pdb 58 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRT- 93 usage_00655.pdb 55 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTF 91 HRARMISLIESGWAQNPDERPSFLKCLIELEPVLR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################