################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:02 2021 # Report_file: c_0578_29.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00014.pdb # 2: usage_00094.pdb # 3: usage_00106.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00164.pdb # 7: usage_00192.pdb # 8: usage_00215.pdb # 9: usage_00222.pdb # 10: usage_00235.pdb # # Length: 76 # Identity: 7/ 76 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 76 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 76 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60 usage_00094.pdb 1 --KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQER 58 usage_00106.pdb 1 --QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHG-ETTPQILTDA 57 usage_00115.pdb 1 --TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADN-D-IRAQVESA 56 usage_00116.pdb 1 --GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHT 58 usage_00164.pdb 1 --NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 58 usage_00192.pdb 1 ------VGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEE 54 usage_00215.pdb 1 --NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 58 usage_00222.pdb 1 -------QVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADA 53 usage_00235.pdb 1 --EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADA 58 v GM C C e Gv V d usage_00014.pdb 61 TADAGYPSSV------ 70 usage_00094.pdb 59 IAALGYTLAE----P- 69 usage_00106.pdb 58 VERAGYHARV------ 67 usage_00115.pdb 57 LQKAGYSLRD----EQ 68 usage_00116.pdb 59 IESLGFEASL------ 68 usage_00164.pdb 59 IDDMGFDAVI------ 68 usage_00192.pdb 55 IEDAGFEAEI------ 64 usage_00215.pdb 59 IDDMGFDAVI------ 68 usage_00222.pdb 54 IEDQGYDVA------- 62 usage_00235.pdb 59 IEDQGYDVAKIEGR-- 72 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################