################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:49 2021 # Report_file: c_0496_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00011.pdb # 2: usage_00068.pdb # 3: usage_00082.pdb # 4: usage_00094.pdb # 5: usage_00123.pdb # # Length: 85 # Identity: 10/ 85 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 85 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 85 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 TEYGRTKRLGELAVERYAEHFYIIRTAWVFGNY--G-KNFVFTMEQLAENHSRLTVVNDQ 57 usage_00068.pdb 1 -VYGKTKLAGEKALQDNCPKHLIFRTSWVYAGK--G-NNFAKTMLRLAKERQTLSVINDQ 56 usage_00082.pdb 1 NVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGK--G-NNFAKTMLRLAKERQTLSVINDQ 57 usage_00094.pdb 1 SFYSKTKAMVEELLKN-YENVCTLRVRMPISSDLTNPRNFITKIARY------EKVVDI- 52 usage_00123.pdb 1 -VYGKTKLAGEKALQDNCPKHLIFRTSWVYAGK--G-NNFAKTMLRLAKERQTLSVINDQ 56 YgkTK gE al i Rt wv g NF tm rl l V nd usage_00011.pdb 58 HGRPTWTRTLAEFMCYLT------- 75 usage_00068.pdb 57 YGAPTGAELLADCTAHAIRVALNK- 80 usage_00082.pdb 58 YGAPTGAELLADCTAHAIRVALNK- 81 usage_00094.pdb 53 PNSMTILDELLPISIEMAKRN---- 73 usage_00123.pdb 57 YGAPTGAELLADCTAHAIRVALNKP 81 g pT La #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################