################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:33 2021 # Report_file: c_0900_176.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00011.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00706.pdb # 5: usage_01263.pdb # # Length: 60 # Identity: 4/ 60 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 60 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 60 ( 46.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 NNGVKGFSYLD-----GVNTW-LGRT-ISIASRS-GYEMLKVPNALTDDKSKPTQGQTIV 52 usage_00038.pdb 1 -----GFSYLD-----GVNTW-LGRT-ISIASRS-GYEMLKVPNALTDDKSKPTQGQTIV 47 usage_00039.pdb 1 -----GFSYLD-----GVNTW-LGRT-ISIASRS-GYEMLKVPNALTDDKSKPTQGQTIV 47 usage_00706.pdb 1 -----DLYVLRYEYKDGSRKLLVKAITVE----SSMILNVLE-----------VADLTLN 40 usage_01263.pdb 1 NNGVKGFSYLD-----GVNTW-LGRT-ISIASRS-GYEMLKVPNALTDDKSKPTQGQTIV 52 gfsyLd Gvntw lgrt is S gyemlkv tqgqTiv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################