################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:37 2021 # Report_file: c_0708_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00062.pdb # 2: usage_00074.pdb # 3: usage_00404.pdb # 4: usage_00405.pdb # 5: usage_00576.pdb # 6: usage_00577.pdb # # Length: 82 # Identity: 3/ 82 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 82 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/ 82 ( 65.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 ---------------------AEFSRTATFAWSHDKIPLLVSGT-----VSGTVDANFST 34 usage_00074.pdb 1 GFSQPQTSFNPDRVFLADIDG----SGTNDIIYAHS--ECLEIYLNESG-------NRF- 46 usage_00404.pdb 1 ---------------------AEFSRTATFAWSHDKIPLLVSGT-----VSGTVDANFST 34 usage_00405.pdb 1 ---------------------AEFSRTATFAWSHDKIPLLVSGT-----VSGTVDANFST 34 usage_00576.pdb 1 ---------------------AEFSRTATFAWSHDKIPLLVSGT-----VSGTVDANFST 34 usage_00577.pdb 1 ---------------------AEFSRTATFAWSHDKIPLLVSGT-----VSGTVDANFST 34 rtatfawshdk llvsgt Nfs usage_00062.pdb 35 DSSLELWSLLAADSEKPIASLQ 56 usage_00074.pdb 47 -SKPISLLL------------- 54 usage_00404.pdb 35 DSSLELWSLLAADSEKPIASLQ 56 usage_00405.pdb 35 DSSLELWSLLAADSEKPIASLQ 56 usage_00576.pdb 35 DSSLELWSLLAADSEKPIASLQ 56 usage_00577.pdb 35 DSSLELWSLLAADSEKPIASLQ 56 SslelwsL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################