################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:50 2021 # Report_file: c_1209_106.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00129.pdb # 2: usage_00130.pdb # 3: usage_00328.pdb # 4: usage_00380.pdb # 5: usage_00381.pdb # 6: usage_00465.pdb # 7: usage_00466.pdb # 8: usage_00590.pdb # 9: usage_00592.pdb # 10: usage_00598.pdb # 11: usage_00903.pdb # 12: usage_00904.pdb # 13: usage_01121.pdb # 14: usage_01147.pdb # 15: usage_01148.pdb # 16: usage_01381.pdb # 17: usage_01389.pdb # 18: usage_01525.pdb # 19: usage_01654.pdb # # Length: 33 # Identity: 2/ 33 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 33 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 33 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 PAFILFHKGRELARAAGARPASELVGFVRGKLG 33 usage_00130.pdb 1 PAFILFHKGRELARAAGARPASELVGFVRGKLG 33 usage_00328.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDAN-- 31 usage_00380.pdb 1 -TLLLFKNGEVAATKVGALSKGQLKCFLDAN-- 30 usage_00381.pdb 1 -TLLLFKNGEVAACKVGALSKGQLKEFLDAN-- 30 usage_00465.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDAN-- 31 usage_00466.pdb 1 -TLLLFKNGEVAATKVGALSKGQLKEFLDA--- 29 usage_00590.pdb 1 -TLLVLKDGEVVETSVGFKPKEALQELVNKHL- 31 usage_00592.pdb 1 -TLLLFKNGEVAATKVGALSKGQLKEFLDANLA 32 usage_00598.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 33 usage_00903.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDANL- 32 usage_00904.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 33 usage_01121.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDAN-- 31 usage_01147.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 33 usage_01148.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 33 usage_01381.pdb 1 PTVYLFQNGQPVDGFQGPQPEEAIRALLD---- 29 usage_01389.pdb 1 --VAFFKNGEDKSVLIGAIPKDQLRDEILKYL- 30 usage_01525.pdb 1 PTLLLFKNGEVAATKVGALSKGQLKEFLDAN-- 31 usage_01654.pdb 1 -TLLLFKNGEVAATKVGALSKGQLKEFLDANLA 32 f G G l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################