################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:08 2021 # Report_file: c_0767_69.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00245.pdb # 2: usage_00246.pdb # 3: usage_00415.pdb # 4: usage_00417.pdb # 5: usage_00471.pdb # 6: usage_00472.pdb # 7: usage_00473.pdb # # Length: 65 # Identity: 10/ 65 ( 15.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 65 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 65 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00245.pdb 1 -LYELSASNFELHVA-Q--GDHFIKFFAPWCGHAKALAPTWEQLALGLEHS-E-TVK-IG 53 usage_00246.pdb 1 -LYELSASNFELHVA-Q--GDHFIKFFAPWCGHAKALAPTWEQLALGLEHS-E-TVK-IG 53 usage_00415.pdb 1 AVVKLATDSFNEYIQ-S-HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK----NITLA 54 usage_00417.pdb 1 -VFQLVGKNHDEIVN-DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATS-DVL-IA 56 usage_00471.pdb 1 MVIELTPSNFNREVIQS-DSLWLVEFYAPWCGHCQRLTPEWKKAATALKDV----VK-VG 54 usage_00472.pdb 1 -VLVLRKSNFAEALA-A-HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-GSEIR-LA 55 usage_00473.pdb 1 -VLVLRKSNFAEALA-A-HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-GSEIR-LA 55 L nf f APWCGH k laP A l usage_00245.pdb 54 KVD-- 56 usage_00246.pdb 54 KVDC- 57 usage_00415.pdb 55 QID-- 57 usage_00417.pdb 57 KLDHT 61 usage_00471.pdb 55 AVD-- 57 usage_00472.pdb 56 KVD-- 58 usage_00473.pdb 56 KVD-- 58 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################