################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:22 2021 # Report_file: c_1382_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01226.pdb # 2: usage_01227.pdb # 3: usage_01252.pdb # 4: usage_01253.pdb # 5: usage_01254.pdb # # Length: 85 # Identity: 72/ 85 ( 84.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 85 ( 84.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 85 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01226.pdb 1 ---ESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCAL 57 usage_01227.pdb 1 -SEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCAL 59 usage_01252.pdb 1 -SEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACS-------VDQKFQSIVIGCAL 52 usage_01253.pdb 1 GSEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACS--------DQKFQSIVIGCAL 52 usage_01254.pdb 1 GSEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACS-------VDQKFQSIVIGCAL 53 ESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACS DQKFQSIVIGCAL usage_01226.pdb 58 EDQKKIKRRLETLLRNIDNSDKAI- 81 usage_01227.pdb 60 EDQKKIKRRLETLLRNIDNSDKAIK 84 usage_01252.pdb 53 EDQKKIKRRLETLLRNIDNSDKA-- 75 usage_01253.pdb 53 EDQKKIKRRLETLLRNIDNSDKA-- 75 usage_01254.pdb 54 EDQKKIKRRLETLLRNIDNSDKA-- 76 EDQKKIKRRLETLLRNIDNSDKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################