################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1480_222.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00593.pdb # 2: usage_00614.pdb # 3: usage_00615.pdb # 4: usage_00616.pdb # 5: usage_00617.pdb # 6: usage_00618.pdb # 7: usage_01921.pdb # 8: usage_02183.pdb # 9: usage_02229.pdb # 10: usage_02230.pdb # 11: usage_03613.pdb # # Length: 39 # Identity: 1/ 39 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 39 ( 35.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 39 ( 56.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00593.pdb 1 ---IGDTI------GDVINDLLAGFGPKGYADGYTLKAF 30 usage_00614.pdb 1 ---IGDTI------GDVINDLLAGFGPKGYADGYTLKA- 29 usage_00615.pdb 1 ---IGDTI------GDVINDLLAGFGPKGYADGYTLKA- 29 usage_00616.pdb 1 ---IGDTI------GDVINDLLAGFGPKGYADGYTLKA- 29 usage_00617.pdb 1 --LIGDTI------GDVINDLLAGFGPKGYADGYTLKA- 30 usage_00618.pdb 1 ---IGDTI------GDVINDLLAGFGPKGYADGYTLKA- 29 usage_01921.pdb 1 TIKEFVSYYYAHSIPSSKIDDFTTRL------------- 26 usage_02183.pdb 1 ---ILDSI------GDVINDLLAAFGPKDYAKNYVGEAF 30 usage_02229.pdb 1 --LILDSI------GDVINDLLAAFGPKDYAKNYVGEA- 30 usage_02230.pdb 1 ---ILDSI------GDVINDLLAAFGPKDYAKNYVGEA- 29 usage_03613.pdb 1 --LILDSI------GDVINDLLAAFGPKDYAKNYVGEA- 30 i d i gdvinDlla fg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################