################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:52 2021 # Report_file: c_1395_25.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00225.pdb # 2: usage_00950.pdb # 3: usage_00951.pdb # 4: usage_01013.pdb # 5: usage_01186.pdb # 6: usage_01187.pdb # 7: usage_01473.pdb # 8: usage_01474.pdb # # Length: 62 # Identity: 20/ 62 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 62 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 62 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00225.pdb 1 -SEISQQVLYIIKHS-HV----------KLSIDGEIVRDADRLDAIGAIGIARTFQFSGH 48 usage_00950.pdb 1 -KEDADRVIHIITKMS------------PLSIEGKVVQDADRLDAIGAVGIARAFMFAGA 47 usage_00951.pdb 1 GKEDADRVIHIITKMS--FRDR-------LSIEGKVVQDADRLDAIGAVGIARAFMFAGA 51 usage_01013.pdb 1 -SELIKKIIRIIQSVS------------ALTIEEKIVQDADRLDAIGAIGIARTFTYGGA 47 usage_01186.pdb 1 -KEDADRVIHIITKS-------------PLSIEGKVVQDADRLDAIGAVGIARAFFAGA- 45 usage_01187.pdb 1 -KEDADRVIHIITKS---FRDREKLEGEPLSIEGKVVQDADRLDAIGAVGIARAFFAGA- 55 usage_01473.pdb 1 -KEDADRVIHIITKMS------------PLSIEGKVVQDADRLDAIGAVGIARAFMFAGA 47 usage_01474.pdb 1 GKEDADRVIHIITKMS--FRDR---------IEGKVVQDADRLDAIGAVGIARAFMFAGA 49 E vi II Iegk VqDADRLDAIGA GIAR F usage_00225.pdb 49 FG 50 usage_00950.pdb 48 K- 48 usage_00951.pdb 52 K- 52 usage_01013.pdb 48 H- 48 usage_01186.pdb -- usage_01187.pdb -- usage_01473.pdb 48 K- 48 usage_01474.pdb 50 K- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################