################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:13 2021 # Report_file: c_0398_68.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00033.pdb # 2: usage_00124.pdb # 3: usage_00226.pdb # 4: usage_00382.pdb # 5: usage_00446.pdb # 6: usage_00705.pdb # # Length: 89 # Identity: 19/ 89 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 89 ( 27.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 89 ( 22.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 LQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDA-DRFQVDLQNGSSVKPRADVAFHF 59 usage_00124.pdb 1 -GPPTFNPPVPYFGRLQGGLTARRTIIIKGYVPPTG-KSFAINFKVGSS----GDIALHI 54 usage_00226.pdb 1 -QNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDA-DRFQVDLQNGSSMKPRADVAFHF 58 usage_00382.pdb 1 -QAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSG---NDIAFHF 56 usage_00446.pdb 1 -GPPTFNPPVPYFGRL----TARRTIIIKGYVPPTG-KSFAINFKVS------GDIALHI 48 usage_00705.pdb 1 -QNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDA-DRFQVDLQNGSSMKPRADVAFHF 58 nP P G I i G Vp F g D A H usage_00033.pdb 60 NPRFKRAGCIVCNTLINEKWGREEIT-YD 87 usage_00124.pdb 55 NPRMG-NGTVVRNSLLNGSWGSEEKKIT- 81 usage_00226.pdb 59 NPRFKRAGCIVCNTLINEKWGREEIT-Y- 85 usage_00382.pdb 57 NPRFEDGGYVVCNTRQNGSWGP------- 78 usage_00446.pdb 49 NPRMG-NGTVVRNSLLNGSWGS------- 69 usage_00705.pdb 59 NPRFKRAGCIVCNTLINEKWGREEIT-Y- 85 NPR G V N l N WG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################