################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:54 2021 # Report_file: c_1477_45.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00107.pdb # 2: usage_00108.pdb # 3: usage_00194.pdb # 4: usage_00195.pdb # 5: usage_00297.pdb # 6: usage_00586.pdb # 7: usage_00587.pdb # 8: usage_00588.pdb # 9: usage_00589.pdb # 10: usage_01122.pdb # 11: usage_01325.pdb # # Length: 41 # Identity: 10/ 41 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 41 ( 24.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 41 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 PSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGN 41 usage_00108.pdb 1 -SKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEW---- 36 usage_00194.pdb 1 QQNLLDELDNRIIKNGYSSRSELVRDMIREKLV-------- 33 usage_00195.pdb 1 -QNLLDELDNRIIKNGYSSRSELVRDMIRE----------- 29 usage_00297.pdb 1 DDDLLETLDSLSQRR-YNNRSEAIRDILRSALA-------- 32 usage_00586.pdb 1 -QNLLDELDNRIIKNGYSSRSELVRDMIREKLVE------- 33 usage_00587.pdb 1 -QNLLDELDNRIIKNGYSSRSELVRDMIREKLVE------- 33 usage_00588.pdb 1 QQNLLDELDNRIIKNGYSSRSELVRDMIREKLV-------- 33 usage_00589.pdb 1 -QNLLDELDNRIIKNGYSSRSELVRDMIREKLV-------- 32 usage_01122.pdb 1 -DDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT---- 36 usage_01325.pdb 1 QQNLLDELDNRIIKNGYSSRSELVRDMIREKLVE------- 34 LL D Y RSE RD R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################