################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:44 2021 # Report_file: c_1077_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00030.pdb # 2: usage_00036.pdb # 3: usage_00038.pdb # 4: usage_00453.pdb # 5: usage_00467.pdb # 6: usage_00468.pdb # 7: usage_00469.pdb # 8: usage_00503.pdb # # Length: 60 # Identity: 9/ 60 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 60 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 60 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 ---DEMKKAAGWAALKYV---EKG-SIVGVGTGSTVNHFIDALGTMS----EEIKGAVSS 49 usage_00036.pdb 1 -TQDELKKAVGWAALQY--------TIVGVGTGSTAAHFIDALGTKG----QIEG-AVSS 46 usage_00038.pdb 1 --QDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHK----AEFDGAVAS 54 usage_00453.pdb 1 PNQDELKQLVGTKAVEWI---KDG-MIVGLGTGSTVKYMVDALGKRVNEEGL-DIVGVT- 54 usage_00467.pdb 1 ---DEMKKAAGWAALKYV---EKG-SIVGVGTGSTVNHFIDALGTMS----EEIKGAVSS 49 usage_00468.pdb 1 ---DEMKKAAGWAALKYV---EKG-SIVGVGTGSTVNHFIDALGTMS----EEIKGAVSS 49 usage_00469.pdb 1 --QDEMKKAAGWAALKYV---EKG-SIVGVGTGSTVNHFIDALGTMS----EEIKGAVSS 50 usage_00503.pdb 1 ---EDLKLKVAKEAVKLV---KDG-MVIGLGTGSTAALFIRELGNRIREEEL-TVFGIP- 51 d K A ivG GTGST fidaLg v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################