################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:13 2021 # Report_file: c_1374_24.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00490.pdb # 2: usage_00589.pdb # 3: usage_00624.pdb # 4: usage_00626.pdb # 5: usage_00627.pdb # 6: usage_00662.pdb # 7: usage_00805.pdb # # Length: 100 # Identity: 5/100 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/100 ( 11.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/100 ( 44.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00490.pdb 1 ---------------------LVKEKKAARTLSAILLAFILTWTPYNIMVLVSTFCK--- 36 usage_00589.pdb 1 -----------------SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQ--G 41 usage_00624.pdb 1 ---------------------GHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEI 39 usage_00626.pdb 1 -----------------------QKRKALKTTVILILAFFACWLPYYIGISIDSFIL--- 34 usage_00627.pdb 1 WDA--------------YGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEI 46 usage_00662.pdb 1 ------------------------EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHC---Q 33 usage_00805.pdb 1 ---LSKFRENCKKRAMSFSKQMRARRKTAKMLMVVLLVFALCYLPISVLNILKRVFG--M 55 k aF cwlP usage_00490.pdb 37 DC-V--------PETLWELGYWLCYVNSTINPMCYALCNK 67 usage_00589.pdb 42 SC-F--------GPIFMTIPAFFAKTSAVYNPVIYIM--- 69 usage_00624.pdb 40 IKQ--GCEFENTVHKWISITEALAFFHCCLNPILYA---- 73 usage_00626.pdb 35 --Q--GCEFENTVHKWISITEALAFFHCCLNPILYA---- 66 usage_00627.pdb 47 IKQ--GCEFENTVHKWISITEALAFFHCCLNPILYAF--- 81 usage_00662.pdb 34 TC-H-V------SPELYSATTWLGYVNSALNPVIYTT--- 62 usage_00805.pdb 56 F---RQASDREAVYACFTFSHWLVYANSAANPIIYNF--- 89 l NP Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################