################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:21 2021 # Report_file: c_0645_9.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00390.pdb # 4: usage_00391.pdb # 5: usage_00706.pdb # 6: usage_00771.pdb # 7: usage_00998.pdb # 8: usage_00999.pdb # 9: usage_01076.pdb # # Length: 46 # Identity: 34/ 46 ( 73.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 46 ( 76.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 46 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 43 usage_00003.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 43 usage_00390.pdb 1 -ILTVRVNGEVVKSPT----SGKDSTPTANGIYIVGSRYKHIIDS- 40 usage_00391.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 43 usage_00706.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHII--- 40 usage_00771.pdb 1 KILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 44 usage_00998.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 43 usage_00999.pdb 1 --LTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMDS 42 usage_01076.pdb 1 -ILTVRVNGEVVKS--MPTSMGKDSTPTANGIYIVGSRYKHIIMD- 42 LTVRVNGEVVKS mGKDSTPTANGIYIVGSRYKHII #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################