################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:25 2021 # Report_file: c_1455_42.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00088.pdb # 2: usage_00242.pdb # 3: usage_00471.pdb # 4: usage_00473.pdb # 5: usage_00475.pdb # 6: usage_00574.pdb # 7: usage_00575.pdb # 8: usage_00576.pdb # 9: usage_00797.pdb # 10: usage_00841.pdb # 11: usage_00842.pdb # 12: usage_00945.pdb # 13: usage_00962.pdb # 14: usage_00992.pdb # 15: usage_01015.pdb # 16: usage_01019.pdb # 17: usage_01048.pdb # # Length: 18 # Identity: 4/ 18 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 18 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 18 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 GRYYAMKILRKEVIIAKD 18 usage_00242.pdb 1 GRYYAMKVLKKEIVVRLK 18 usage_00471.pdb 1 -REYAIKILEKRHIIKE- 16 usage_00473.pdb 1 GKIFAMKVLKKAMIVRNA 18 usage_00475.pdb 1 GKIFAMKVLKKAMIVRN- 17 usage_00574.pdb 1 GNHYAMKILDKQKVVKLK 18 usage_00575.pdb 1 GNHYAMKILDKQKVVKLK 18 usage_00576.pdb 1 GNHYAMKILDKQKVVKLK 18 usage_00797.pdb 1 ---LALKVLFKAQLEKAG 15 usage_00841.pdb 1 ---YACKKLNKKRLKKRK 15 usage_00842.pdb 1 ---YACKKLNKKRLKKRK 15 usage_00945.pdb 1 -NHYAMKILDKQKVVKLK 17 usage_00962.pdb 1 -KVYAMKLLSKFEMIKR- 16 usage_00992.pdb 1 GNHYAMKILDKQKVVKLK 18 usage_01015.pdb 1 RKVYAMKLLSKFEMIK-- 16 usage_01019.pdb 1 GNHYAMKILDKQKVVKLK 18 usage_01048.pdb 1 GRYYAMKILKKEVIVAKD 18 A K L K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################