################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:22:49 2021 # Report_file: c_0435_31.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # 6: usage_00046.pdb # 7: usage_00047.pdb # 8: usage_00088.pdb # 9: usage_00173.pdb # 10: usage_00193.pdb # 11: usage_00259.pdb # 12: usage_00343.pdb # 13: usage_00344.pdb # 14: usage_00398.pdb # 15: usage_00476.pdb # 16: usage_00477.pdb # 17: usage_00478.pdb # 18: usage_00500.pdb # 19: usage_00524.pdb # 20: usage_00525.pdb # 21: usage_00526.pdb # 22: usage_00574.pdb # 23: usage_00575.pdb # 24: usage_00614.pdb # 25: usage_00683.pdb # 26: usage_00704.pdb # # Length: 126 # Identity: 31/126 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/126 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/126 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00042.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00043.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00044.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00045.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00046.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00047.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00088.pdb 1 -GNARDIIKGE-----AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 54 usage_00173.pdb 1 -GNARDIIKGE-----AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 54 usage_00193.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00259.pdb 1 G--------EVYEGQV-PLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVS 51 usage_00343.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00344.pdb 1 -GVAKGVVKDE-----PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 54 usage_00398.pdb 1 ---------EVYEGQVSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 51 usage_00476.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00477.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00478.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00500.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00524.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00525.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00526.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00574.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00575.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00614.pdb 1 -GNARDIIKGE-----AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 54 usage_00683.pdb 1 ----------------PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 44 usage_00704.pdb 1 ----------------PETRVAIKTV-EAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 43 VA KT E S FL EA F VR GV usage_00041.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE--------PV-LAPPSLSKMIQMAGEIADGMA 95 usage_00042.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE--------PV-LAPPSLSKMIQMAGEIADGMA 95 usage_00043.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE--------PV-LAPPSLSKMIQMAGEIADGMA 95 usage_00044.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE----------MLAPPSLSKMIQMAGEIADGMA 94 usage_00045.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRP--------------PPSLSKMIQMAGEIADGMA 90 usage_00046.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRP---------------PSLSKMIQMAGEIADGMA 89 usage_00047.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRP--------------PPSLSKMIQMAGEIADGMA 90 usage_00088.pdb 55 SKGQPTLVVMELMAHGDLKSYLRSLRPEA---EN-NPG-RPPPTLQEMIQMAAEIADGMA 109 usage_00173.pdb 55 SKGQPTLVVMELMAHGDLKSYLRSLRPEA---EN-NPG-RPPPTLQEMIQMAAEIADGMA 109 usage_00193.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPEE-----NNPV-LAPPSLSKMIQMAGEIADGMA 98 usage_00259.pdb 52 LQSLPRFILLEFMAGGDLKSFLRETRPRPSQP--------SSLAMLDLLHVARDIACGCQ 103 usage_00343.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE-------NPV-LAPPSLSKMIQMAGEIADGMA 96 usage_00344.pdb 55 SQGQPTLVIMELMTRGDLKSYLRSLRP----------V-LAPPSLSKMIQMAGEIADGMA 103 usage_00398.pdb 52 LQSLPRFILLELMAGGDLKSFLRETRPRPSQP--------SSLAMLDLLHVARDIACGCQ 103 usage_00476.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPEM---E-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00477.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPEM---E-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00478.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPEM---E-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00500.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPEM---E-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00524.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRP-------------APPSLSKMIQMAGEIADGMA 91 usage_00525.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPAM---A-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00526.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPAM---A-NNPV-LAPPSLSKMIQMAGEIADGMA 99 usage_00574.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRP---------------PSLSKMIQMAGEIADGMA 89 usage_00575.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSL-R---------------PSLSKMIQMAGEIADGMA 88 usage_00614.pdb 55 SKGQPTLVVMELMAHGDLKSYLRSLRPEA---EN-NPG-RPPPTLQEMIQMAAEIADGMA 109 usage_00683.pdb 45 SQGQPTLVIMELMTRGDLKSYLRSLRPE---------V-LAPPSLSKMIQMAGEIADGMA 94 usage_00704.pdb 44 SQGQPTLVIMELMTRGDLKSYLRSLRPEM------NPV-LAPPSLSKMIQMAGEIADGMA 96 P ElM GDLKS LR p A IA G usage_00041.pdb 96 YLNANK 101 usage_00042.pdb 96 YLNANK 101 usage_00043.pdb 96 YLNANK 101 usage_00044.pdb 95 YLNANK 100 usage_00045.pdb 91 YLNANK 96 usage_00046.pdb 90 YLNANK 95 usage_00047.pdb 91 YLNANK 96 usage_00088.pdb 110 YLNAKK 115 usage_00173.pdb 110 YLNAK- 114 usage_00193.pdb 99 YLNANK 104 usage_00259.pdb 104 YLEENH 109 usage_00343.pdb 97 YLNANK 102 usage_00344.pdb 104 YLNANK 109 usage_00398.pdb 104 YLEENH 109 usage_00476.pdb 100 YLNANK 105 usage_00477.pdb 100 YLNANK 105 usage_00478.pdb 100 YLNANK 105 usage_00500.pdb 100 YLNANK 105 usage_00524.pdb 92 YLNANK 97 usage_00525.pdb 100 YLNANK 105 usage_00526.pdb 100 YLNANK 105 usage_00574.pdb 90 YLNANK 95 usage_00575.pdb 89 YLNANK 94 usage_00614.pdb 110 YLNAKK 115 usage_00683.pdb 95 YLNANK 100 usage_00704.pdb 97 YLNANK 102 YL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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