################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:37 2021 # Report_file: c_1434_107.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00089.pdb # 2: usage_00818.pdb # 3: usage_00836.pdb # 4: usage_00837.pdb # 5: usage_00840.pdb # 6: usage_00841.pdb # 7: usage_01169.pdb # 8: usage_01665.pdb # 9: usage_02451.pdb # 10: usage_02902.pdb # 11: usage_03348.pdb # 12: usage_03484.pdb # # Length: 68 # Identity: 10/ 68 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 68 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 68 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 QSSILRQMYWTRGPNHEDPSETMIP-HS----QRPIQLMSLLGEAALHGPAFYSKISKLV 55 usage_00818.pdb 1 -ASIDRQLLWTKGPNHQNPFETLPG--------HRPQLMALLGEAAMHGEKYYRTVASRV 51 usage_00836.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG--Q-----RPSQLMALLGEAAMHGEKYYRTVASRV 53 usage_00837.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG-HA----QRPSQLMALLGEAAMHGEKYYRTVASRV 55 usage_00840.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG--H-----RPSQLMALLGEAAMHGEKYYRTVASRV 53 usage_00841.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG--------RPSQLMALLGEAAMHGEKYYRTVASRV 52 usage_01169.pdb 1 ITSITRQFYWLKANRTSDPSSPPAFDRQ----ARSAQLENALAYASQHGPVMFDTVRQIA 56 usage_01665.pdb 1 KSSILRQLEWSKTTSRHMVIEETYD---LAKEERGVQLEELQVAAAAHGQEFFNFVCREL 57 usage_02451.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG-HA----QRPSQLMALLGEAAMHGEKYYRTVASRV 55 usage_02902.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG-HA----QRPSQLMALLGEAAMHGEKYYRTVASRV 55 usage_03348.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG--H----QRPSQLMALLGEAAMHGEKYYRTVASRV 54 usage_03484.pdb 1 RASIDRQLLWTKGPNHQNPFETLPG-HA----QRPSQLMALLGEAAMHGEKYYRTVASRV 55 SI RQ W k p e r QL ll Aa HG v usage_00089.pdb 56 IAELKEGG 63 usage_00818.pdb 52 SKE----- 54 usage_00836.pdb 54 SKEA---- 57 usage_00837.pdb 56 SKEAAQS- 62 usage_00840.pdb 54 SKEA---- 57 usage_00841.pdb 53 SKEA---- 56 usage_01169.pdb 57 IKTAQG-- 62 usage_01665.pdb 58 ERQ----- 60 usage_02451.pdb 56 SKEAAQS- 62 usage_02902.pdb 56 SKEAA--- 60 usage_03348.pdb 55 SKEAAQS- 61 usage_03484.pdb 56 SKEAAQS- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################