################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:56 2021 # Report_file: c_0447_5.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00032.pdb # 2: usage_00033.pdb # 3: usage_00082.pdb # 4: usage_00114.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00142.pdb # 8: usage_00172.pdb # 9: usage_00174.pdb # 10: usage_00177.pdb # 11: usage_00186.pdb # 12: usage_00187.pdb # 13: usage_00198.pdb # 14: usage_00199.pdb # 15: usage_00200.pdb # 16: usage_00226.pdb # # Length: 108 # Identity: 31/108 ( 28.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/108 ( 28.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/108 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 55 usage_00033.pdb 1 ----KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 55 usage_00082.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNSKDQF---Y-VPTVFENYVADIEVDGKQVELALWDT 55 usage_00114.pdb 1 --IRKKLVIVGDGACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 57 usage_00129.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 58 usage_00130.pdb 1 -AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 58 usage_00142.pdb 1 --IRKKLVIVGDGACGKTCLLIVNSKDQFPEVY-VPTVFENYIADIEVDGKQVELALWDT 57 usage_00172.pdb 1 -AIRKKLVIVGDGACGKTCLLIVNSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 58 usage_00174.pdb 1 ----LKIVVVGDGAVGKTCLLLAFSKGEIPTAY-VPTVFENFSHVMKYKNEEFILHLWDT 55 usage_00177.pdb 1 -----KLVLVGDVQCGKTAMLQVLAKDCYPETY-VPTVFENYTACLET--QRVELSLWDT 52 usage_00186.pdb 1 --KALKIVVVGDGAVGKTCLLLAFSKGEIPTAY-VPTVFENFSHVMKYKNEEFILHLWDT 57 usage_00187.pdb 1 -KKALKIVVVGDGAVGKTCLLLAFSKGEIPTAY-VPTVFENFSHVMKYKNEEFILHLWDT 58 usage_00198.pdb 1 --IRKKLVIVGDVACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 57 usage_00199.pdb 1 VVARCKLVLVGDVQCGKTAMLQVLAKDCYPETY-VPTVFENYTACLETEEQRVELSLWDT 59 usage_00200.pdb 1 -VARCKLVLVGDVQCGKTAMLQVLAKDCYPETY-VPTVFENYTACLETEEQRVELSLWDT 58 usage_00226.pdb 1 --IRKKLVIVGDGACGKTCLLIVNSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDT 57 K V VGD GKT L K Y FEN L LWDT usage_00032.pdb 56 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 93 usage_00033.pdb 56 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 93 usage_00082.pdb 56 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 93 usage_00114.pdb 58 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 95 usage_00129.pdb 59 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 96 usage_00130.pdb 59 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 96 usage_00142.pdb 58 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 95 usage_00172.pdb 59 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP 106 usage_00174.pdb 56 AGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTK---------- 93 usage_00177.pdb 53 SGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALK----------- 89 usage_00186.pdb 58 AGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTK---------- 95 usage_00187.pdb 59 AGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTK---------- 96 usage_00198.pdb 58 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK---------- 95 usage_00199.pdb 60 SGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYC- 106 usage_00200.pdb 59 SGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDS-------------- 92 usage_00226.pdb 58 AGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-- 103 G YD RPL Y D D L CF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################