################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:56 2021 # Report_file: c_0863_45.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00044.pdb # 2: usage_00045.pdb # 3: usage_00249.pdb # 4: usage_00305.pdb # 5: usage_00355.pdb # 6: usage_00478.pdb # 7: usage_00479.pdb # 8: usage_00960.pdb # 9: usage_01043.pdb # # Length: 75 # Identity: 18/ 75 ( 24.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 75 ( 50.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 75 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 GVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 58 usage_00045.pdb 1 -VGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 57 usage_00249.pdb 1 -VGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 57 usage_00305.pdb 1 -VGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 57 usage_00355.pdb 1 --GEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFM 58 usage_00478.pdb 1 GVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 58 usage_00479.pdb 1 --GEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFI 56 usage_00960.pdb 1 ----RGFLE--NGQTREHAYLLRALGISEIVVSVNKLDLM--SWSEDRFQEIKNIVSDFL 52 usage_01043.pdb 1 --GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPA-YEKRYDEIVKEVSAYI 57 eag GQTREHa La tlG qliV VNKmD E R EIv S f usage_00044.pdb 59 KKVGYNPKTVPFVP- 72 usage_00045.pdb 58 KKVGYNPKTVPFVP- 71 usage_00249.pdb 58 KKVGYNPKTVPFVP- 71 usage_00305.pdb 58 KKVGYNPKTVPFVP- 71 usage_00355.pdb 59 RSYGFNTNKVRFVP- 72 usage_00478.pdb 59 KKVGYNPKTVPFVP- 72 usage_00479.pdb 57 KKVGYNPKTVPFVP- 70 usage_00960.pdb 53 IKMVGFKTSNVHFVP 67 usage_01043.pdb 58 KKIGYNPATVPFVP- 71 k g n v fvp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################