################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:40:51 2021 # Report_file: c_0071_3.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00008.pdb # 8: usage_00009.pdb # 9: usage_00011.pdb # 10: usage_00019.pdb # 11: usage_00020.pdb # 12: usage_00021.pdb # 13: usage_00022.pdb # 14: usage_00023.pdb # 15: usage_00024.pdb # 16: usage_00025.pdb # 17: usage_00026.pdb # 18: usage_00027.pdb # 19: usage_00046.pdb # 20: usage_00047.pdb # 21: usage_00048.pdb # 22: usage_00049.pdb # 23: usage_00050.pdb # 24: usage_00051.pdb # 25: usage_00052.pdb # 26: usage_00053.pdb # 27: usage_00054.pdb # 28: usage_00055.pdb # # Length: 209 # Identity: 77/209 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/209 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/209 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -CKIKVIGVGGGGSNAVNRMYEDGIEGVELYAINTDVQHLSTLKVPNKIQIGEKVTRGLG 59 usage_00003.pdb 1 -CKIKVIGVGGGGSNAVNRMYEDGIEGVELYAINTDVQHLSTLKVPNKIQIGEKVTRGLG 59 usage_00004.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00005.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00006.pdb 1 -ASIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 59 usage_00007.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00008.pdb 1 -ASIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 59 usage_00009.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00011.pdb 1 -ASIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 59 usage_00019.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00020.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00021.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00022.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00023.pdb 1 LATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 60 usage_00024.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00025.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00026.pdb 1 LATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 60 usage_00027.pdb 1 -ATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLG 59 usage_00046.pdb 1 -LKIKVIGVGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLG 59 usage_00047.pdb 1 -LKIKVIGVGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLG 59 usage_00048.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00049.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00050.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00051.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00052.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00053.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 usage_00054.pdb 1 ----KVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 56 usage_00055.pdb 1 --SIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLG 58 KVIGVGG G NA NRM VE A NTD Q L K QIG TRGLG usage_00002.pdb 60 AGAKPEVGEEAALEDIDKIKEILRDTDMVFISAGLGGGTGTGAAPVIAKTAKEMGILTVA 119 usage_00003.pdb 60 AGAKPEVGEEAALEDIDKIKEILRDTDMVFISAGLGGGTGTGAAPVIAKTAKEMGILTVA 119 usage_00004.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00005.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00006.pdb 60 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 119 usage_00007.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00008.pdb 60 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 119 usage_00009.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00011.pdb 60 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 119 usage_00019.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00020.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00021.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00022.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00023.pdb 61 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 120 usage_00024.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00025.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00026.pdb 61 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 120 usage_00027.pdb 60 AGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVG 119 usage_00046.pdb 60 AGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVA 119 usage_00047.pdb 60 AGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVA 119 usage_00048.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00049.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00050.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00051.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00052.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00053.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 usage_00054.pdb 57 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 116 usage_00055.pdb 59 AGANPEVGKKAAEESKEQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVG 118 AG PE G AA E I MVF G GGGTGTGA PV A AK G LTV usage_00002.pdb 120 VATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIKDAFKEVDSVL 179 usage_00003.pdb 120 VATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIKDAFKEVDSVL 179 usage_00004.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00005.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00006.pdb 120 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 179 usage_00007.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00008.pdb 120 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 179 usage_00009.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00011.pdb 120 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 179 usage_00019.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00020.pdb 120 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00021.pdb 120 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00022.pdb 120 VVTRPFGFEGRKRQTQAAAGVESMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00023.pdb 121 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 180 usage_00024.pdb 120 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00025.pdb 120 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00026.pdb 121 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 180 usage_00027.pdb 120 VVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVL 179 usage_00046.pdb 120 IVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKDAFLKADETL 179 usage_00047.pdb 120 IVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKDAFLKADETL 179 usage_00048.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00049.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00050.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00051.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00052.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00053.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 usage_00054.pdb 117 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 176 usage_00055.pdb 119 VVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVL 178 T PF FEG A G D I I N AF D L usage_00002.pdb 180 SKAVRGIT--------------------- 187 usage_00003.pdb 180 SKAVRGITSIVVT---------------- 192 usage_00004.pdb 179 RQGVQGISDLIA----------------- 190 usage_00005.pdb 179 RQGVQGISDLIA----------------- 190 usage_00006.pdb 180 RQGVQGISDLI------------------ 190 usage_00007.pdb 179 RQGV------------------------- 182 usage_00008.pdb 180 RQGVQGISDLI------------------ 190 usage_00009.pdb 179 RQGVQGISDLI------------------ 189 usage_00011.pdb 180 RQGVQGISDLIA----------------- 191 usage_00019.pdb 179 RQGVQGISDLIA----------------- 190 usage_00020.pdb 180 RQGVQGISDLIAV-SGEVNLDFADVKTI- 206 usage_00021.pdb 180 RQGVQGISDLIA----------------- 191 usage_00022.pdb 180 RQGVQGISDLIA----------------- 191 usage_00023.pdb 181 RQGVQGISDLIA----------------- 192 usage_00024.pdb 180 RQGVQGISDLIA----------------- 191 usage_00025.pdb 180 RQGVQGISDLIA----------------- 191 usage_00026.pdb 181 RQGVQGISDLI------------------ 191 usage_00027.pdb 180 RQGVQGISDLIAV---------------- 192 usage_00046.pdb 180 HQGVKGISELI------------------ 190 usage_00047.pdb 180 HQGVKGISELITK---------------- 192 usage_00048.pdb 179 RQGVQGISDLIALD-------FADVKTIM 200 usage_00049.pdb 179 RQGVQGISDLI------------------ 189 usage_00050.pdb 179 RQGVQGISDLIA----------------- 190 usage_00051.pdb 179 RQGVQGISDLI------------------ 189 usage_00052.pdb 179 RQGVQGISDLI------------------ 189 usage_00053.pdb 179 RQGVQGISDLI------------------ 189 usage_00054.pdb 177 RQGVQGISDLI------------------ 187 usage_00055.pdb 179 RQGVQGISDLI------------------ 189 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################