################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:54 2021 # Report_file: c_1306_161.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00187.pdb # 2: usage_00310.pdb # 3: usage_00311.pdb # 4: usage_00866.pdb # 5: usage_00899.pdb # 6: usage_00902.pdb # 7: usage_00937.pdb # 8: usage_01039.pdb # 9: usage_01044.pdb # 10: usage_01045.pdb # 11: usage_01046.pdb # 12: usage_01047.pdb # 13: usage_01100.pdb # 14: usage_01101.pdb # 15: usage_01241.pdb # 16: usage_01309.pdb # 17: usage_01614.pdb # 18: usage_01615.pdb # 19: usage_01682.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 40 ( 15.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 40 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00187.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_00310.pdb 1 ----APDELASLEK-DFGGRIGVYALDTGSGD---TVG-- 30 usage_00311.pdb 1 ---MAPDELASLEK-DFGGRIGVYALDTGSGD---TVGH- 32 usage_00866.pdb 1 -IAAQQKAALQHAHAHSSGYFITQD-SAFGNLILP----- 33 usage_00899.pdb 1 ---AVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 32 usage_00902.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_00937.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_01039.pdb 1 ---SVQQQLEALEK-SSGGRLGVALINTADNS---QILY- 32 usage_01044.pdb 1 V-QQVQKKLAALEK-QSGGRLGVALINTADNS---QVLYR 35 usage_01045.pdb 1 ---QVQKKLAALEK-QSGGRLGVALINTADNS---QVLYR 33 usage_01046.pdb 1 --QQVQKKLAALEK-QSGGRLGVALINTADNS---QVLYR 34 usage_01047.pdb 1 --QQVQKKLAALEK-QSGGRLGVALINTADNS---QVLYR 34 usage_01100.pdb 1 --ADVQQKLAELER-QSGGRLGVALINTADNS---QILY- 33 usage_01101.pdb 1 ----VQQKLAELER-QSGGRLGVALINTADNS---QILY- 31 usage_01241.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_01309.pdb 1 -------ELAALEK-ASNGRLGIAVLDTSNGT---RIAHH 29 usage_01614.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_01615.pdb 1 --SAVQQKLAALEK-SSGGRLGVALIDTADNT---QVLY- 33 usage_01682.pdb 1 --AAEESPLAEIER-RSGGRLGVFAIDTGSGR---TLG-- 32 l e Gr g t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################