################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:41 2021 # Report_file: c_0186_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00014.pdb # 9: usage_00015.pdb # 10: usage_00016.pdb # 11: usage_00019.pdb # 12: usage_00020.pdb # # Length: 190 # Identity: 59/190 ( 31.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/190 ( 54.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/190 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NPETEFVLRKFGVMEPELIES-AKG-K-EIILVDHSEKSQSFDDLEEGKLIAIIDHHKVG 57 usage_00004.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00005.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00008.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHQRIA 58 usage_00009.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHQRIA 58 usage_00012.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00013.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00014.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00015.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00016.pdb 1 -GETQYALDYFKQESPRLVET-AANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 58 usage_00019.pdb 1 SAETQFALDTFNVPAPELLTDDLDG--QDVILVDHNEFQQSSDTIASATIKHVIDHHRIA 58 usage_00020.pdb 1 SAETQFALDTFNVPAPELLTDDLDG--QDVILVDHNEFQQSSDTIASATIKHVIDHHRIA 58 ETq aLd F P L vILVDHnE qQS i vIDH ria usage_00001.pdb 58 LTTT-EPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKELKPDLAGLLLSAIISDTVLF 116 usage_00004.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00005.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00008.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00009.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00012.pdb 59 NFETAEPLYYRAEPVGCTATILNK-YK--------ENNVKIEKEIAGL-LSAIISDSLLF 108 usage_00013.pdb 59 NFETAEPLYYRAEPVGCTATILNK-YK--------ENNVKIEKEIAGL-LSAIISDSLLF 108 usage_00014.pdb 59 NFETAEPLYYRAEPVGCTATILNK-YK--------ENNVKIEKEIAGL-LSAIISDSLLF 108 usage_00015.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00016.pdb 59 NFETAEPLYYRAEPVGCTATILNKMYK--------ENNVKIEKEIAGLMLSAIISDSLLF 110 usage_00019.pdb 59 NFETAGPL-YRAEPVGCTATILYKMFR--------ERGFEIKPEIAGLMLSAIISDSLLF 109 usage_00020.pdb 59 NFETAGPL-YRAEPVGCTATILYKMFR--------ERGFEIKPEIAGLMLSAIISDSLLF 109 nfeT Pl YrAePVGcTATil k e i eiAGL LSAIISDslLF usage_00001.pdb 117 KSPTTTDLDKEMAKKLAEIAGISNIEEFGMEILKAKSVVGKLKPEEIINMDFKNFDFNGK 176 usage_00004.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00005.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00008.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00009.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00012.pdb 109 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNL-KAGADLSKKTVEELISLDAKEFTLGSK 166 usage_00013.pdb 109 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNL-KAGADLSKKTVEELISLDAKEFTLGSK 166 usage_00014.pdb 109 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNL-KAGADLSKKTVEELISLDAKEFTLGSK 166 usage_00015.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00016.pdb 111 KSPTCTDQDVAAAKELAEIAGV-DAEEYGLNMLKAGADLSKKTVEELISLDAKEFTLGSK 169 usage_00019.pdb 110 KSPT-TQQDVKAAEELKDIAKV-DIQKYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDY 167 usage_00020.pdb 110 KSPT-TQQDVKAAEELKDIAKV-DIQKYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDY 167 KSPT T qDv aA eL IA v d yGl KAga k vE l DaK Ft g usage_00001.pdb 177 KVGIGQVEVI 186 usage_00004.pdb 170 KVEIAQVN-- 177 usage_00005.pdb 170 KVEIAQVN-- 177 usage_00008.pdb 170 KVEIAQVN-- 177 usage_00009.pdb 170 KVEIAQVN-- 177 usage_00012.pdb 167 KVEIAQVNTV 176 usage_00013.pdb 167 KVEIAQVNTV 176 usage_00014.pdb 167 KVEIAQVNTV 176 usage_00015.pdb 170 KVEIAQVN-- 177 usage_00016.pdb 170 KVEIAQVN-- 177 usage_00019.pdb 168 VTRIAQVN-- 175 usage_00020.pdb 168 VTRIAQVN-- 175 IaQVn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################