################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:45 2021 # Report_file: c_1226_101.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00150.pdb # 2: usage_00257.pdb # 3: usage_00258.pdb # 4: usage_00259.pdb # 5: usage_00260.pdb # 6: usage_00304.pdb # 7: usage_00319.pdb # 8: usage_00333.pdb # 9: usage_00334.pdb # 10: usage_00340.pdb # 11: usage_00354.pdb # 12: usage_00507.pdb # 13: usage_00508.pdb # 14: usage_01010.pdb # 15: usage_01138.pdb # 16: usage_01208.pdb # 17: usage_01254.pdb # 18: usage_01288.pdb # 19: usage_01434.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 75 ( 16.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 75 ( 61.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00150.pdb 1 TKPVLINCARPS-------N---------------------------NTQYCVVNRTQWN 26 usage_00257.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00258.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00259.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00260.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00304.pdb 1 KESVEINCTRPN---------NN-T------------------IGDIRQAHCNISRAKWN 32 usage_00319.pdb 1 NTSVEINCTRPN---------NN-TRP-----------GEI--IGDIRQAHCNISRAKWN 37 usage_00333.pdb 1 NESVVINCTRPN---------N-----------------------DIRQAHCNLSKTQWE 28 usage_00334.pdb 1 NESVVINCTRPN---------N-----------------------DIRQAHCNLSKTQWE 28 usage_00340.pdb 1 -ESVVINCTRPN---------N-------------------------RQAHCNLSKTQWE 25 usage_00354.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00507.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_00508.pdb 1 NESVVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 29 usage_01010.pdb 1 NESVVINCTRPN---------N-----------------------DIRQAHCNLSKTQWE 28 usage_01138.pdb 1 ---VVINCTRPN---------N----------------------GDIRQAHCNLSKTQWE 26 usage_01208.pdb 1 ------PTYVVGVNADAYSHD-------------------------EPII-SNASCTTNC 28 usage_01254.pdb 1 ---VEINCTRPN---------QNT-RKSIHIGPGRAFYTTGEIIGDIRQAHCNISRAKWN 47 usage_01288.pdb 1 NETVEINCTRPN---------N----------------------GDIRQAHCNISKAKWE 29 usage_01434.pdb 1 NESVVINCTRPN---------N-----------------------DIRQAHCNLSKTQWE 28 nc rp cn s w usage_00150.pdb 27 DTLGQVAIQLR---- 37 usage_00257.pdb 30 NTLEQIAIKLKEQFG 44 usage_00258.pdb 30 NTLEQIAIKLKEQFG 44 usage_00259.pdb 30 NTLEQIAIKLKEQFG 44 usage_00260.pdb 30 NTLEQIAIKLKEQFG 44 usage_00304.pdb 33 DTLKQIVIKLREQ-- 45 usage_00319.pdb 38 NTLKQIASKLREQFG 52 usage_00333.pdb 29 NTLEQIAIKLKEQFG 43 usage_00334.pdb 29 NTLEQIAIKLKEQFG 43 usage_00340.pdb 26 NTLEQIAIKLKEQF- 39 usage_00354.pdb 30 NTLEQIAIKLKEQ-- 42 usage_00507.pdb 30 NTLEQIAIKLKEQF- 43 usage_00508.pdb 30 NTLEQIAIKLKEQ-- 42 usage_01010.pdb 29 NTLEQIAIKLKEQ-- 41 usage_01138.pdb 27 NTLEQIAIKLKEQ-- 39 usage_01208.pdb 29 LAPFVKVLDQKF-G- 41 usage_01254.pdb 48 DTLKQIVIKLREQF- 61 usage_01288.pdb 30 NTLKQIARKLREHFK 44 usage_01434.pdb 29 NTLEQIAIKLKEQFG 43 tl q l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################