################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:49:34 2021 # Report_file: c_0757_22.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00015.pdb # 8: usage_00046.pdb # 9: usage_00084.pdb # 10: usage_00085.pdb # 11: usage_00086.pdb # 12: usage_00220.pdb # 13: usage_00221.pdb # 14: usage_00222.pdb # 15: usage_00223.pdb # 16: usage_00224.pdb # 17: usage_00242.pdb # 18: usage_00243.pdb # 19: usage_00244.pdb # 20: usage_00247.pdb # 21: usage_00271.pdb # 22: usage_00272.pdb # 23: usage_00273.pdb # 24: usage_00274.pdb # 25: usage_00275.pdb # 26: usage_00276.pdb # 27: usage_00277.pdb # 28: usage_00278.pdb # # Length: 81 # Identity: 1/ 81 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 81 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 81 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00010.pdb 1 ----RILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 49 usage_00011.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00012.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00013.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00014.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00015.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00046.pdb 1 --KLRLLLSNDDGVYAKGLAILAKTLADLG-E----VDVVAP--DRNRSGASNSLTLNAP 51 usage_00084.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00085.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00086.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00220.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00221.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00222.pdb 1 -ASMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 52 usage_00223.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00224.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00242.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00243.pdb 1 ---MRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 50 usage_00244.pdb 1 -ASMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 52 usage_00247.pdb 1 -----IYKVEI----------DTKSYWKALGISPFHEHAEVVFTANDSG--------PRR 37 usage_00271.pdb 1 ----RILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 49 usage_00272.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00273.pdb 1 -ASMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 52 usage_00274.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00275.pdb 1 ---MRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 50 usage_00276.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00277.pdb 1 --SMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 51 usage_00278.pdb 1 MASMRILLSNDDGVHAPGIQTLAKALREFA-D----VQVVAP--DRNRSGASNSLTLESS 53 illsnd laK l v vvap drnrs usage_00009.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00010.pdb 50 LRTFTFDN---GDIAV----- 62 usage_00011.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00012.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00013.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00014.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00015.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00046.pdb 52 LHIKNLEN---GISVE----- 64 usage_00084.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00085.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00086.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00220.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00221.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00222.pdb 53 LRTFTFDN---GDIAV----- 65 usage_00223.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00224.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00242.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00243.pdb 51 LRTFTFDN---GDIAVQ---- 64 usage_00244.pdb 53 LRTFTFDN---GDIAVQ---- 66 usage_00247.pdb 38 YTIAALL-SPYSYSTTAVVTN 57 usage_00271.pdb 50 LRTFTFDN---GDIAVQ---- 63 usage_00272.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00273.pdb 53 LRTFTFDN---GDIAVQ---- 66 usage_00274.pdb 52 LRTFTFDN---GDIAVQ---- 65 usage_00275.pdb 51 LRTFTFDN---GDIAV----- 63 usage_00276.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00277.pdb 52 LRTFTFDN---GDIAV----- 64 usage_00278.pdb 54 LRTFTFDN---GDIAVQ---- 67 l g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################