################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:51 2021 # Report_file: c_0343_7.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00015.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00018.pdb # 9: usage_00020.pdb # 10: usage_00021.pdb # 11: usage_00023.pdb # 12: usage_00024.pdb # 13: usage_00025.pdb # 14: usage_00039.pdb # # Length: 130 # Identity: 27/130 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/130 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/130 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 LFTAKVTARG-GRAGHITSDDGVLDFDIVMPN---AAAAGQTGTNPEQLFAAGYAACFGG 56 usage_00006.pdb 1 -YTAIVTATGGR-DGSVVSSDNVLNVKLSVPQGLG--GPGGSGTNPEQLFAAGYSACFIG 56 usage_00007.pdb 1 LYTAIVTATGGR-DGSVVSSDNVLNVKLSVPQGLG--GPGGSGTNPEQLFAAGYSACFIG 57 usage_00008.pdb 1 LYTAIVTATGGR-DGSVVSSDNVLNVKLSVPQGLG--GPGGSGTNPEQLFAAGYSACFIG 57 usage_00015.pdb 1 VYTAEATATGGR-AGTTRSSDDRLNLDLSVPAE-G--GDGGPGTNPEQLFAAGYAACFQG 56 usage_00016.pdb 1 VYTAEATATGGR-AGTTRSSDDRLNLDLSVPAE-G--GDGGPGTNPEQLFAAGYAACFQG 56 usage_00017.pdb 1 -YTGKTHTTSGGRDGAARSSDGRLDIQLSSPG------SAGTGTNPEQLFAAGWSACFIG 53 usage_00018.pdb 1 -YTGKTHTTSGGRDGAARSSDGRLDIQLSSPG------SAGTGTNPEQLFAAGWSACFIG 53 usage_00020.pdb 1 -----AKATGGR-DGRATVPESGLDLKLTTPRELG--GAGGAGANPEQLFAAGYSACFIG 52 usage_00021.pdb 1 -----AKATGGR-DGRATVPESGLDLKLTTPRELG--GAGGAGANPEQLFAAGYSACFIG 52 usage_00023.pdb 1 LYTATATATG-GRDGRAVSSDGVLDVKLSTPREMG--GQGGAATNPEQLFAAGYSACFIG 57 usage_00024.pdb 1 LYTATATATG-GRDGRAVSSDGVLDVKLSTPREMG--GQGGAATNPEQLFAAGYSACFIG 57 usage_00025.pdb 1 LYTAIVTATG-GRDGSVVSSDNVLNVKLSVPQGLG--GPGGSGTNPEQLFAAGYSA-FIG 56 usage_00039.pdb 1 LYTAIVTATG-GRDGSVVSSDNVLNVKLSVPQGLG--GPGGSGTNPEQLFAAGYSA-FIG 56 t G L l P g NPEQLFAAG A F G usage_00002.pdb 57 ALEHVAKEQNIEID--SEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAH 114 usage_00006.pdb 57 ALKFVANKEV-DLPAEPRVEGRVGIGEIP-G-GFGLVVELRIAVSGMERSMLQTLVDKAH 113 usage_00007.pdb 58 ALKFVANKEV-DLPAEPRVEGRVGIGEIP-G-GFGLVVELRIAVSGMERSMLQTLVDKAH 114 usage_00008.pdb 58 ALKFVANKEV-DLPAEPRVEGRVGIGEIP-G-GFGLVVELRIAVSGMERSMLQTLVDKAH 114 usage_00015.pdb 57 ALGVVSRRQKIDVPADSTITARVGLQKAG-L-AFALDVELEGHFPGLSREQAEGL-HAAH 113 usage_00016.pdb 57 ALGVVSRRNKIDVPADSTITARVGLQK------FALDVELEGHFPGLSREQAEGL-HAAH 109 usage_00017.pdb 54 AMQLAARAAKVTLPADLAVDAEVDLGTAG-N-AYFLQARLNVSVPGLERDVAQRIVDAAH 111 usage_00018.pdb 54 AMQLAARAAKVTLPADLAVDAEVDLGTAG-N-AYFLQARLNVSVPGLERDVAQRIVDAAH 111 usage_00020.pdb 53 AMKFVAARDKIAIPADAAIEGSVGIGAIP-N-GFGIEVELKISLPGLDRDIAQTLIDRAH 110 usage_00021.pdb 53 AMKFVAARDKIAIPADAAIEGSVGIGAIP-N-GFGIEVELKISLPGLDRDIAQTLIDRAH 110 usage_00023.pdb 58 AMKFVAGQRKQTLPADASITGKVGIGQIP-G-GFGLEVELHINLPGMEREAAEALVAAAH 115 usage_00024.pdb 58 AMKFVAGQRKQTLPADASITGKVGIGQIP-G-GFGLEVELHINLPGMEREAAEALVAAAH 115 usage_00025.pdb 57 ALKFVANKEKVDLPAEPRVEGRVGIGEIP-G-GFGLVVELRIAVSGMERSMLQTLVDKAH 114 usage_00039.pdb 57 ALKFVANKEKVDLPAEPRVEGRVGIGEIP-G-GFGLVVELRIAVSGMERSMLQTLVDKAH 114 A p V L g R AH usage_00002.pdb 115 EFCPYSKAT- 123 usage_00006.pdb 114 RVCPYSNATR 123 usage_00007.pdb 115 RVCPYSNATR 124 usage_00008.pdb 115 RVCPYSNATR 124 usage_00015.pdb 114 EVCPYSAATR 123 usage_00016.pdb 110 EVCPYSAATR 119 usage_00017.pdb 112 QTCPYSKATR 121 usage_00018.pdb 112 QTCPYSKATR 121 usage_00020.pdb 111 VVCPYSNATR 120 usage_00021.pdb 111 VVCPYSNATR 120 usage_00023.pdb 116 QVCPYSNATR 125 usage_00024.pdb 116 QVCPYSNATR 125 usage_00025.pdb 115 RVCPYSNAT- 123 usage_00039.pdb 115 RVCPYSNAT- 123 CPYS AT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################