################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:48 2021 # Report_file: c_0461_79.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00003.pdb # 2: usage_00188.pdb # 3: usage_00204.pdb # 4: usage_00347.pdb # 5: usage_00423.pdb # 6: usage_00682.pdb # 7: usage_00772.pdb # 8: usage_00891.pdb # 9: usage_00941.pdb # 10: usage_01052.pdb # 11: usage_01141.pdb # 12: usage_01172.pdb # # Length: 106 # Identity: 1/106 ( 0.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/106 ( 2.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/106 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ---TILLIDDHP-MLRTGVKQLIS--MAPDITVVGEASNGEQGIELAESL---------- 44 usage_00188.pdb 1 ---RVLVVDDSA-FMRMVLKDIID--SQPDMKVVGFAKDGLEAVEKAIEL---------- 44 usage_00204.pdb 1 ---RVLIVDDAA-FMRMMLKDIIT--KAG-YEVAGEATNGREAVEKYKEL---------- 43 usage_00347.pdb 1 ---RVLIAEDEA-LIRMDLAEMLR--EEG-YEIVGEAGDGQEAVELAELH---------- 43 usage_00423.pdb 1 SMISIFIAEDQQ-MLLGALGSLLN--LEDDMEVVGKGTTGQDAVDFVKKR---------- 47 usage_00682.pdb 1 -MKRVLVVDDEESI-TSSLSAILE--EEG-YH-PDTAKTLREAEKKIKEL---------- 44 usage_00772.pdb 1 ---RVLVVDDNF-ISRKVATGKLK--KMG-VSEVEQCDSGKEALRLVTEGLTQREEQGSV 53 usage_00891.pdb 1 --PGVLIVEDGR-LAAATLRIQLE--SLG-YDVLGVFDNGEEAVRCAPDL---------- 44 usage_00941.pdb 1 --LRILIVDDEK-LTRDGLIANINWKALS-FDQIDQADDGINAIQIALKH---------- 46 usage_01052.pdb 1 ---RLMIIEDEP-LIAMDIEQMVE--SLG-HEVVGIARTKDEALALYEKE---------- 43 usage_01141.pdb 1 ---RVLIVDDAA-FMRMMLKDIIT--KAG-YEVAGEATNGREAVEKYKEL---------- 43 usage_01172.pdb 1 ---NVMIVDDAA-MMRLYIASFIK--TLPDFKVVAQAANGQEALDKLAAQ---------- 44 D a usage_00003.pdb 45 ---D-PDLILLDLNMPG-MNGLETLDKLREKSL----SGRIVVFS- 80 usage_00188.pdb 45 ---K-PDVITMDIEMPN-LNGIEALKLIMKKAP-----TRVIMVS- 79 usage_00204.pdb 44 ---K-PDIVTMDITMPE-MNGIDAIKEIMKIDP----NAKIIVCS- 79 usage_00347.pdb 44 ---K-PDLVIMDVKMPR-RDGIDAASEIASKRI-----APIVVLT- 78 usage_00423.pdb 48 ---Q-PDVCIMDIEMPG-KTGLEAAEELKD-TG-----CKIIILT- 81 usage_00682.pdb 45 ---F-FPVIVLDVWMPD-GDGVNFIDFIKENSP----DSVVIVITG 81 usage_00772.pdb 54 DKLP-FDYIFMDCQMPE-MDGYEATREIRKVEKSYGVRTPIIAVS- 96 usage_00891.pdb 45 ---R-PDIALVDIMLCGALDGVETAARLAAGCN-----LPIIFIT- 80 usage_00941.pdb 47 ---P-PNVLLTDVRMPR-MDGIELVDNILKLYP----DCSVIFM-- 81 usage_01052.pdb 44 ---K-PRMVLADIQLADGSSGIDAVNEILHDNT-----IPVIFIT- 79 usage_01141.pdb 44 ---K-PDIVTMDITMPE-MNGIDAIKEIMKIDP----NAKIIVCS- 79 usage_01172.pdb 45 ---PNVDLILLNIEM-------EFLRHAKLKTR-----AKICMLAS 75 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################