################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:29:14 2021 # Report_file: c_1372_158.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00008.pdb # 2: usage_00013.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00024.pdb # 6: usage_00234.pdb # 7: usage_00235.pdb # 8: usage_00276.pdb # 9: usage_00278.pdb # 10: usage_00440.pdb # 11: usage_00521.pdb # 12: usage_00728.pdb # 13: usage_00730.pdb # 14: usage_00733.pdb # 15: usage_00737.pdb # 16: usage_00738.pdb # 17: usage_00739.pdb # 18: usage_00840.pdb # 19: usage_00968.pdb # 20: usage_00973.pdb # 21: usage_00974.pdb # 22: usage_00987.pdb # 23: usage_00988.pdb # 24: usage_01016.pdb # 25: usage_01017.pdb # 26: usage_01018.pdb # 27: usage_01019.pdb # 28: usage_01206.pdb # 29: usage_01229.pdb # 30: usage_01230.pdb # 31: usage_01238.pdb # 32: usage_01244.pdb # # Length: 98 # Identity: 59/ 98 ( 60.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 98 ( 64.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 98 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ---KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 55 usage_00013.pdb 1 WKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 58 usage_00020.pdb 1 WKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 58 usage_00021.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 54 usage_00024.pdb 1 WKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 58 usage_00234.pdb 1 ---KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFSPQTDF--G 55 usage_00235.pdb 1 ---KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFEPQTDF--G 55 usage_00276.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALFFSVVTLTTVGYGDFSPQTDF--G 56 usage_00278.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALWFSVVTLTTVGYGDFSPQTDF--G 56 usage_00440.pdb 1 AKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPTPQTDF--G 57 usage_00521.pdb 1 ---KEFQVLFVLTFLTLTSGTIFYSTVEGLRPLDALYFSVVTLTTVGDGNFSPQTDF--G 55 usage_00728.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGD-TPPPQTDF--G 53 usage_00730.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGN-TPPPQTDF--G 53 usage_00733.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGN-TPPPQTDF--G 53 usage_00737.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 53 usage_00738.pdb 1 AKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 57 usage_00739.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 53 usage_00840.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGYGDFSPQTDF--G 56 usage_00968.pdb 1 -KDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 56 usage_00973.pdb 1 -----FQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 52 usage_00974.pdb 1 -KDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 56 usage_00987.pdb 1 -------VLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDFGK- 51 usage_00988.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 55 usage_01016.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 55 usage_01017.pdb 1 ----EFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 53 usage_01018.pdb 1 ------QVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 51 usage_01019.pdb 1 --------LFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGE-TPPPQTDF--G 49 usage_01206.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDF--G 56 usage_01229.pdb 1 ---KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGNGNFSPQTDF--G 55 usage_01230.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGEGNFSPQTDF--G 56 usage_01238.pdb 1 ---KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGDGDFSPQTDF--G 55 usage_01244.pdb 1 --DKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGFGDFSPQTDF--G 56 LFVLTiLTLiSGTIFYSTVEGLRPiDAL FSVVTLTTVG PQTDF usage_00008.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNVQ----------- 82 usage_00013.pdb 59 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 93 usage_00020.pdb 59 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 93 usage_00021.pdb 55 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 90 usage_00024.pdb 59 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 93 usage_00234.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNVQ----------- 82 usage_00235.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNVQL---------- 83 usage_00276.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 92 usage_00278.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 92 usage_00440.pdb 58 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 92 usage_00521.pdb 56 KVFTILYIFIGIGLVFGFIHK----------------- 76 usage_00728.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 89 usage_00730.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 88 usage_00733.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--Q--------- 80 usage_00737.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 89 usage_00738.pdb 58 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 92 usage_00739.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 89 usage_00840.pdb 57 KIFTILYIFIGIGLVFGFIHKLAV-------------- 80 usage_00968.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 92 usage_00973.pdb 53 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 87 usage_00974.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 92 usage_00987.pdb 52 -IFTILYIFIGIGLVFGFIHKLAVNV--QLPSILS--- 83 usage_00988.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 91 usage_01016.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 91 usage_01017.pdb 54 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 89 usage_01018.pdb 52 KIFTILYIFIGIGLVFGFIHKLAVNV--QLP------- 80 usage_01019.pdb 50 KIFTILYIFIGIGLVFGFIHKLAVNV--Q--------- 76 usage_01206.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV------------ 82 usage_01229.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNVQ----------- 82 usage_01230.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV------------ 82 usage_01238.pdb 56 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNL- 90 usage_01244.pdb 57 KIFTILYIFIGIGLVFGFIHKLAVNV--QLPSILSNLV 92 iFTILYIFIGIGLVFGFIHK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################