################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:22:53 2021 # Report_file: c_0270_32.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00107.pdb # 6: usage_00220.pdb # 7: usage_00221.pdb # 8: usage_00222.pdb # 9: usage_00223.pdb # 10: usage_00310.pdb # # Length: 239 # Identity: 177/239 ( 74.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 190/239 ( 79.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/239 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 -REQLLQRARLAEQAERYDDMASA-MKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWR 58 usage_00048.pdb 1 -REQLLQRARLAEQAERYDDMASA-MKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWR 58 usage_00049.pdb 1 -REQLLQRARLAEQAERYDDMASA-MKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWR 58 usage_00050.pdb 1 -REQLLQRARLAEQAERYDDMASA-MKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWR 58 usage_00107.pdb 1 -REQLVQKARLAEQAERYDDMAAA-MKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 58 usage_00220.pdb 1 ---QLVQKARLAEQAERYDDMAAA-MKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 56 usage_00221.pdb 1 DREQLVQKARLAEQAERYDDMAAA-MKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 59 usage_00222.pdb 1 DREQLVQKARLAEQAERYDDMAAA-MKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 59 usage_00223.pdb 1 DREQLVQKARLAEQAERYDDMAAA-MKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 59 usage_00310.pdb 1 DREQLVQKARLAEQAERYDDA---AAKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 57 QL Q ARLAEQAERYDDm mK VTELNEPLSNE RNLLSVAYKNVVGARRSSWR usage_00047.pdb 59 VISSIEQKTM----ADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQY 114 usage_00048.pdb 59 VISSIEQKTM----ADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQY 114 usage_00049.pdb 59 VISSIEQKTM----ADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQY 114 usage_00050.pdb 59 VISSIEQKTM----ADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQY 114 usage_00107.pdb 59 VISSIEQKTSNEKI--------EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 110 usage_00220.pdb 57 VISSIEQKTS----ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 112 usage_00221.pdb 60 VISSIEQKTS----ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 115 usage_00222.pdb 60 VISSIEQKTS----ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 115 usage_00223.pdb 60 VISSIEQKTS----ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 115 usage_00310.pdb 58 VISSIEQKTS----ADGNEKKIE-VRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY 112 VISSIEQKT E V AYREKIEKELE VC DVLSLLD LIKNC QY usage_00047.pdb 115 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLAL 174 usage_00048.pdb 115 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLAL 174 usage_00049.pdb 115 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLAL 174 usage_00050.pdb 115 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLAL 174 usage_00107.pdb 111 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 170 usage_00220.pdb 113 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 172 usage_00221.pdb 116 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 175 usage_00222.pdb 116 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 175 usage_00223.pdb 116 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 175 usage_00310.pdb 113 ESKVFYLK-KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEH-QPTHPIRLGLAL 170 ESKVFYLK KGDYYRYLAEVA GEK VVE SE AY EA EISKE QPTHPIRLGLAL usage_00047.pdb 175 NFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 232 usage_00048.pdb 175 NFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 232 usage_00049.pdb 175 NFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 232 usage_00050.pdb 175 NFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 232 usage_00107.pdb 171 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT-- 227 usage_00220.pdb 173 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 231 usage_00221.pdb 176 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 233 usage_00222.pdb 176 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 233 usage_00223.pdb 176 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS- 233 usage_00310.pdb 171 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIQLLRDNLTLWTS-- 227 N SVFYYEIQNAPEQAC LAK AFDDAIAELDTLNEDSYKDSTLImqLlrdnltlwt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################