################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:13 2021 # Report_file: c_0069_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00068.pdb # 2: usage_00069.pdb # 3: usage_00070.pdb # 4: usage_00071.pdb # 5: usage_00078.pdb # 6: usage_00079.pdb # 7: usage_00144.pdb # # Length: 250 # Identity: 57/250 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/250 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/250 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 KVVIITGGS-SGGK-GATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PG-QILTVQ-DV 55 usage_00069.pdb 1 KVVIITGGS-SGGK-GATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PG-QILTVQ-DV 55 usage_00070.pdb 1 KVVIITGGS-SGGK-GATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PG-QILTVQ-DV 55 usage_00071.pdb 1 KVVIITGGS-SGGK-GATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PG-QILTVQ-DV 55 usage_00078.pdb 1 KVAFITGGGTGLGK-GTTLLSSLGAQCVIASRK-DVLKATAEQISS-QTGNKVHAIQCDV 57 usage_00079.pdb 1 KVAFITGGGTGLGK-GTTLLSSLGAQCVIASRK-DVLKATAEQISS-QTGNKVHAIQCDV 57 usage_00144.pdb 1 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-ATGRRCLPLSMDV 59 KV ITGG Gk g t Ga VI R l i G q DV usage_00068.pdb 56 RNTD-D-IQKIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 113 usage_00069.pdb 56 RNTD-D-IQKIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 113 usage_00070.pdb 56 RNTD-D-IQKIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 113 usage_00071.pdb 56 RNTD-D-IQKIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 113 usage_00078.pdb 58 RDPD-VQN-TVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 115 usage_00079.pdb 58 RDPD-VQN-TVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 115 usage_00144.pdb 60 RAPPAVMA-AVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR 118 R d G I INnAAGNFi P e LS N w IvlnGT usage_00068.pdb 114 AIGKYWIEKGIKGNIIN-VATYAWDAGPGVIHSAAAKAGVLA-TKTLAVEWGRKYGIRVN 171 usage_00069.pdb 114 AIGKYWIEKGIKGNIIN-VATYAWDAGPGVIHSAAAKAGVLA-TKTLAVEWGRKYGIRVN 171 usage_00070.pdb 114 AIGKYWIEKGIKGNIIN-VATYAWDAGPGVIHSAAAKAGVLA-TKTLAVEWGRKYGIRVN 171 usage_00071.pdb 114 AIGKYWIEKGIKGNIIN-VATYAWDAGPGVIHSAAAKAGVLA-TKTLAVEWGRKYGIRVN 171 usage_00078.pdb 116 EIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA-SKSLAAEWGK-YG-RFN 172 usage_00079.pdb 116 EIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA-SKSLAAEWGK-YG-RFN 172 usage_00144.pdb 119 VLYEKFFRDHGGVIVNI-TATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGP-QNIRVN 176 igk i ya v sa AKAgV A k LA EWG yg R N usage_00068.pdb 172 AIAPGPIERTG---GA-----------EAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 217 usage_00069.pdb 172 AIAPGPIERTGGAD------------EEAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 219 usage_00070.pdb 172 AIAPGPIER-------------------AKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 212 usage_00071.pdb 172 AIAPGPIERTG---GA-----------EAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 217 usage_00078.pdb 173 VIQPGPIKT------------LDPTGTFEK-EIGRIPCGRLGTVEELANLAAFLCSDYAS 219 usage_00079.pdb 173 VIQPGPIKT---------------TGTFEK-EIGRIPCGRLGTVEELANLAAFLCSDYAS 216 usage_00144.pdb 177 SLAPGPISGTE---G-LRRLG--GPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLAS 230 i PGPI k i P gRLGt eE A la LcSd A usage_00068.pdb 218 YINGTCTD-- 225 usage_00069.pdb 220 YINGTCTD-- 227 usage_00070.pdb 213 YINGTCTD-- 220 usage_00071.pdb 218 YINGTCTD-- 225 usage_00078.pdb 220 WINGAVIKFD 229 usage_00079.pdb 217 WINGAVIKFD 226 usage_00144.pdb 231 YVTGAVLVAD 240 inG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################