################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:43 2021 # Report_file: c_1439_39.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00253.pdb # 2: usage_00280.pdb # 3: usage_00424.pdb # 4: usage_00540.pdb # 5: usage_00541.pdb # # Length: 73 # Identity: 44/ 73 ( 60.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 73 ( 78.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 73 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00253.pdb 1 ---MKGGGATKILLETLLLAAHKTVVS------SQRCLLEILRTFERAHQVTYSQSSKIA 51 usage_00280.pdb 1 -SRMKGGSATKILLETLLLVAHKAE-------VTEKCLLEILRTYERAHKVTYSQSKKIA 52 usage_00424.pdb 1 -SRMKGGSATKILLETLLLAAHKTV--DQGIAASQRCLLEILRTFERAHQVTYSQSPKIA 57 usage_00540.pdb 1 SSRMKGGSATKILLETLLLAAHKTV--DQGIAASQRCLLEILRTFERAHQVTYSQSPKIA 58 usage_00541.pdb 1 SSRMKGGSATKILLETLLLAAHKTV--DQGIAASQRCLLEILRTFERAHQVTYSQSPKIA 58 MKGGsATKILLETLLLaAHKtv sqrCLLEILRTfERAHqVTYSQS KIA usage_00253.pdb 52 TLMKQVGISLEKK 64 usage_00280.pdb 53 ALMKQTATSLQKK 65 usage_00424.pdb 58 TLMKSVSTSLEKK 70 usage_00540.pdb 59 TLMKSVSTSLETT 71 usage_00541.pdb 59 TLMKSVSTSLETT 71 tLMK v tSLe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################