################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:39 2021 # Report_file: c_0772_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00015.pdb # 2: usage_00611.pdb # 3: usage_00652.pdb # 4: usage_00653.pdb # 5: usage_00654.pdb # 6: usage_00655.pdb # 7: usage_00656.pdb # 8: usage_00657.pdb # # Length: 110 # Identity: 14/110 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/110 ( 49.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/110 ( 44.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 GVVVSVNYRRAPE----------------------------------H-RYPCAYDDGWT 25 usage_00611.pdb 1 -ICFVMDTRG---QGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVR 56 usage_00652.pdb 1 --ICFVMDT----------------------------------------YYRRVFTDAVR 18 usage_00653.pdb 1 -ICFVMDTR----------------------------------------YYRRVFTDAVR 19 usage_00654.pdb 1 -ICFVMDTR----------------------------------------YYRRVFTDAVR 19 usage_00655.pdb 1 --ICFVMDT----------------------------------------YYRRVFTDAVR 18 usage_00656.pdb 1 --ICFVMDT----------------------------------------YYRRVFTDAVR 18 usage_00657.pdb 1 -ICFVMDTR----------------------------------------YYRRVFTDAVR 19 yYrrvftDavr usage_00015.pdb 26 ALKWVMSQPFMRS-ARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILL- 73 usage_00611.pdb 57 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 101 usage_00652.pdb 19 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 63 usage_00653.pdb 20 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 64 usage_00654.pdb 20 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 64 usage_00655.pdb 19 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 63 usage_00656.pdb 19 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 63 usage_00657.pdb 20 AVEAAASFPQVD-QERIVIAGGSQGGGIALAVSALS----KKAKALLCDV 64 AveaaaSfPqvd eRiviaGgSqGGgIAlaVsals kKakallcd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################