################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:50:43 2021 # Report_file: c_0209_2.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00015.pdb # 2: usage_00047.pdb # 3: usage_00082.pdb # 4: usage_00085.pdb # 5: usage_00089.pdb # 6: usage_00106.pdb # 7: usage_00120.pdb # 8: usage_00121.pdb # 9: usage_00125.pdb # 10: usage_00126.pdb # 11: usage_00129.pdb # 12: usage_00141.pdb # 13: usage_00142.pdb # 14: usage_00150.pdb # 15: usage_00151.pdb # 16: usage_00155.pdb # 17: usage_00162.pdb # 18: usage_00173.pdb # 19: usage_00203.pdb # 20: usage_00204.pdb # 21: usage_00216.pdb # 22: usage_00226.pdb # 23: usage_00227.pdb # 24: usage_00228.pdb # 25: usage_00229.pdb # 26: usage_00246.pdb # 27: usage_00252.pdb # 28: usage_00258.pdb # 29: usage_00265.pdb # 30: usage_00266.pdb # 31: usage_00268.pdb # 32: usage_00293.pdb # 33: usage_00316.pdb # 34: usage_00317.pdb # 35: usage_00328.pdb # 36: usage_00345.pdb # 37: usage_00361.pdb # 38: usage_00378.pdb # 39: usage_00394.pdb # 40: usage_00403.pdb # 41: usage_00410.pdb # 42: usage_00416.pdb # # Length: 114 # Identity: 31/114 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/114 ( 36.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/114 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -IVMTQTPLSLSVTPGQPASISCKSSQSLLHTDGTTYLYWYLQKPGQPPQLLIYEVSNRF 59 usage_00047.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00082.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00085.pdb 1 ELVMTQTPPSLPVSLGDQASISCRSSQSIVHSNGDTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00089.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00106.pdb 1 -VQMTQTPLTLSVTIGQPASISCESSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00120.pdb 1 -ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRF 59 usage_00121.pdb 1 -ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRF 59 usage_00125.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRF 59 usage_00126.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRF 59 usage_00129.pdb 1 -IVMTQAAPSVPVTPGESVSISCRSTKSLLHSNGNTYLYWFLQRPGQSPQRLIYYMSNLA 59 usage_00141.pdb 1 --LMTQTPLSLPVSLGDQASISCRSSQNIVHSNGYTYLEWYLQKPGQSPKLLIYTVSNRF 58 usage_00142.pdb 1 --VMTQSPLSLSVTPGEPASISCRSSQSLLHTNGYNYLDWYVQKPGQSPQLLIYLASNRA 58 usage_00150.pdb 1 --VMTQSPLSLPVSPGEPASISCRSSQSLLHGNGYNYLDWYLQKPGQSPRLLIYLGSNRA 58 usage_00151.pdb 1 -IVMTQSPLSLPVSPGEPASISCRSSQSLLHGNGYNYLDWYLQKPGQSPRLLIYLGSNRA 59 usage_00155.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRF 59 usage_00162.pdb 1 -ILMNQTPLSLPVSLGDQASISCRSSQYIVHRNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00173.pdb 1 -VVVTQTPLSLPVSLGDQASISCRSSEVIVTRNGYTPIEWYLQKPGQSPKLLIYKAYKRF 59 usage_00203.pdb 1 -IVMTQSPLSLPVTPGEPASISCRSSQNIVHNNGITYLEWYLQKPGQSPQLLIYKVSDRF 59 usage_00204.pdb 1 -IVMTQSPLSLPVTPGEPASISCRSSQNIVHNNGITYLEWYLQKPGQSPQLLIYKVSDRF 59 usage_00216.pdb 1 DVVVTQTPLSLPVSLGDQASISCRSSEVIVTRNGYTPIEWYLQKPGQSPKLLIYKAYKRF 60 usage_00226.pdb 1 -IELTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTSLHWYLKKPGQSPKLLIYKVSTRF 59 usage_00227.pdb 1 DVVMTQTPITLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 60 usage_00228.pdb 1 -VVMTQTPITLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00229.pdb 1 --VMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 58 usage_00246.pdb 1 ELVMTQSPLSLPVSLGDQASISCRPSQSLVHSNGNTYLHWYLQKPGQSPKLLIYRVSNRF 60 usage_00252.pdb 1 -VVMTQTPLSLSVTLGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLA 59 usage_00258.pdb 1 DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIHRMSNLA 60 usage_00265.pdb 1 --LMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGKSPKLLIYKVSNRF 58 usage_00266.pdb 1 -VMMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLEWYMQKPGQSPMLLIYKVSNRF 59 usage_00268.pdb 1 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRF 60 usage_00293.pdb 1 DIVMTQTPSSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00316.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHRNGNTYLHWYLQKPGQSPKLLIHKVSNRF 59 usage_00317.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHRNGNTYLHWYLQKPGQSPKLLIHKVSNRF 59 usage_00328.pdb 1 --VMTQIPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWSLQKPGQSPNLLIYKVSNRF 58 usage_00345.pdb 1 DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRA 60 usage_00361.pdb 1 --LMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRF 58 usage_00378.pdb 1 -IVLTQSPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00394.pdb 1 DIVMTQTPSSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00403.pdb 1 --LLTQTPLSLPVSLGDQASISCRSSQTIVHTNGNTYFEWYLQKPGQSPHLLIYKVSNRL 58 usage_00410.pdb 1 -LVMTQSPLSLPVSLGDQASISCRPSQSLVHSNGNTYLHWYLQKPGQSPKLLIYRVSNRF 59 usage_00416.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSGQSLLYSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 tQ V G SISC G W q pG sP LI usage_00015.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQNIQLPWTFGQGTKVEI--- 110 usage_00047.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI--- 110 usage_00082.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI--- 110 usage_00085.pdb 61 SGVPDRFSGSGSGTDFTLEISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRA 114 usage_00089.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPLTFGAGTKLELKRA 113 usage_00106.pdb 60 SGVPDRFTGSGSGTDFTLRISRVEAEDLGVYYCVQGTHFPRTFGGGTKLEI--- 110 usage_00120.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEI--- 110 usage_00121.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEI--- 110 usage_00125.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPWTFGGGTKLEI--- 110 usage_00126.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPWTFGGGTKLEI--- 110 usage_00129.pdb 60 SGVPDRFSGRGSGTDFTLRISRVEAEDAGVYYCMQSLEYPYTFGGGTKLEI--- 110 usage_00141.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFRGSHVPTFGGGTKLEI---- 108 usage_00142.pdb 59 SGVPDRFSGSGSGTDFTLKISRVETEDVGVYYCMQALQIPRTFGQGTKVEI--- 109 usage_00150.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEI--- 109 usage_00151.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEI--- 110 usage_00155.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEI--- 110 usage_00162.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEL--- 110 usage_00173.pdb 60 PGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFDGSTVPPKFGGGTKLEI--- 110 usage_00203.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHIPPTFGQGTKVEI--- 110 usage_00204.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHIPPTFGQGTKVEI--- 110 usage_00216.pdb 61 PGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFDGSTVPPKFGGGTKLEI--- 111 usage_00226.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPFTFGSGTKLEL--- 110 usage_00227.pdb 61 SRVPDRFTGSGAGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTKLEI--- 111 usage_00228.pdb 60 SRVPDRFTGSGAGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTKLEI--- 110 usage_00229.pdb 59 SGVPDRFTGSGSGTDFTLKISRIEAEDLGLYYCWQGTHFPRTFGGGTKLEI--- 109 usage_00246.pdb 61 SGVPDRFSGSGSGTAFTLKISRVEAEDLGVYFCSQGTHVPYTFGGGTKLE---- 110 usage_00252.pdb 60 SGVPDRFTGSGSGTDFTLKINRVEAEDLGIYYCWQGTHFPWTFGGGTKLEI--- 110 usage_00258.pdb 61 SGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYPYTFGGGTRLEV--- 111 usage_00265.pdb 59 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLES--- 109 usage_00266.pdb 60 SGVPDRFSGSGSGTDFTLKISSVEAEDLGVFYCFQGSRVPLTFGAGTKLEL--- 110 usage_00268.pdb 61 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLEL--- 111 usage_00293.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSLVPPTFGAGTKLEL--- 111 usage_00316.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLEL-- 111 usage_00317.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLEL-- 111 usage_00328.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHDPWTFGGGTKLEI--- 109 usage_00345.pdb 61 SGVPDRFIGSGSGTDFTLKISRVEAEDVGVFYCMQALQAVGFGPGTKVEI---- 110 usage_00361.pdb 59 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLES--- 109 usage_00378.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI--- 110 usage_00394.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSLVPPTFGAGTKLEL--- 111 usage_00403.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGLYYCFQGSHSPWTFGGGTKLEL--- 109 usage_00410.pdb 60 SGVPDRFSGSGSGTAFTLKISRVEAEDLGVYFCSQGTHVPYTFGGGTKLEL--- 110 usage_00416.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPRTFGGGTKLEIKRA 113 VPDRF GsG GT FTL IsrvEaED G C p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################