################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:58 2021 # Report_file: c_1243_77.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00028.pdb # 2: usage_00051.pdb # 3: usage_00130.pdb # 4: usage_00131.pdb # 5: usage_00509.pdb # 6: usage_00586.pdb # 7: usage_00643.pdb # 8: usage_00796.pdb # 9: usage_01044.pdb # 10: usage_01146.pdb # 11: usage_01147.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 33 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 33 ( 69.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 -----KVLFFAQVREL------VGTDATEVA-- 20 usage_00051.pdb 1 -----KVILKGPLISQ------FNFREIYVN-- 20 usage_00130.pdb 1 -----KVLYFAEIKDI------LQKAQEDIV-- 20 usage_00131.pdb 1 ----MKVLYFAEIKDI------LQKAQEDIV-- 21 usage_00509.pdb 1 ---MIKVLFFAQVREL------VGTDATEVA-- 22 usage_00586.pdb 1 GTMELELRFFATFREV------VGQKSIYWRVD 27 usage_00643.pdb 1 ------VMIDVRNMNNNDFTSI----------- 16 usage_00796.pdb 1 -----KVLFFAQVREL------VGTDATEVA-- 20 usage_01044.pdb 1 ---RYVYILNSPEEVE------EV---VFERQ- 20 usage_01146.pdb 1 -----KVLFFAQVREL------VGTDATEVA-- 20 usage_01147.pdb 1 ------VLFFAQVREL------VGTDATEVA-- 19 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################