################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 09:24:22 2021 # Report_file: c_1136_43.html ################################################################################################ #==================================== # Aligned_structures: 66 # 1: usage_00027.pdb # 2: usage_00029.pdb # 3: usage_00051.pdb # 4: usage_00067.pdb # 5: usage_00073.pdb # 6: usage_00074.pdb # 7: usage_00075.pdb # 8: usage_00076.pdb # 9: usage_00077.pdb # 10: usage_00078.pdb # 11: usage_00086.pdb # 12: usage_00087.pdb # 13: usage_00088.pdb # 14: usage_00091.pdb # 15: usage_00092.pdb # 16: usage_00096.pdb # 17: usage_00097.pdb # 18: usage_00101.pdb # 19: usage_00107.pdb # 20: usage_00145.pdb # 21: usage_00146.pdb # 22: usage_00152.pdb # 23: usage_00153.pdb # 24: usage_00178.pdb # 25: usage_00179.pdb # 26: usage_00180.pdb # 27: usage_00183.pdb # 28: usage_00186.pdb # 29: usage_00195.pdb # 30: usage_00233.pdb # 31: usage_00234.pdb # 32: usage_00239.pdb # 33: usage_00241.pdb # 34: usage_00242.pdb # 35: usage_00243.pdb # 36: usage_00244.pdb # 37: usage_00246.pdb # 38: usage_00261.pdb # 39: usage_00272.pdb # 40: usage_00280.pdb # 41: usage_00281.pdb # 42: usage_00288.pdb # 43: usage_00289.pdb # 44: usage_00308.pdb # 45: usage_00309.pdb # 46: usage_00345.pdb # 47: usage_00405.pdb # 48: usage_00406.pdb # 49: usage_00497.pdb # 50: usage_00537.pdb # 51: usage_00538.pdb # 52: usage_00539.pdb # 53: usage_00574.pdb # 54: usage_00575.pdb # 55: usage_00576.pdb # 56: usage_00583.pdb # 57: usage_00584.pdb # 58: usage_00585.pdb # 59: usage_00586.pdb # 60: usage_00592.pdb # 61: usage_00613.pdb # 62: usage_00654.pdb # 63: usage_00687.pdb # 64: usage_00688.pdb # 65: usage_00691.pdb # 66: usage_00697.pdb # # Length: 57 # Identity: 40/ 57 ( 70.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 57 ( 73.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 57 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00029.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00051.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00067.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00073.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00074.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00075.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00076.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00077.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00078.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00086.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00087.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00088.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00091.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00092.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00096.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00097.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00101.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00107.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00145.pdb 1 TINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 57 usage_00146.pdb 1 TINQFLTQYFLHQ--ANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 55 usage_00152.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00153.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00178.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00179.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00180.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00183.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00186.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00195.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00233.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 55 usage_00234.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00239.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00241.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00242.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00243.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00244.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00246.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00261.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00272.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00280.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00281.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00288.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00289.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00308.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00309.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00345.pdb 1 -VNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 56 usage_00405.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00406.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00497.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00537.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00538.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 55 usage_00539.pdb 1 TINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 57 usage_00574.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00575.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00576.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00583.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00584.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00585.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00586.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00592.pdb 1 --NQFLTQYFLHLQPANCKVESLAMFLGELSLIDADPYLKYLPSLIAGAAFHLALYT 55 usage_00613.pdb 1 --NQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 55 usage_00654.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT 57 usage_00687.pdb 1 TVNQFLTQYFLH---------LLAMFLGELSLIDADPYLKYLPSVIAGAAFHLA--- 45 usage_00688.pdb 1 TVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 57 usage_00691.pdb 1 TINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 57 usage_00697.pdb 1 TINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLALYT 57 NQFLTQYFLH sLAMFLGELSLIDADPYLKYLPSvIA AAFHLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################