################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:25 2021 # Report_file: c_1434_100.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01539.pdb # 2: usage_01540.pdb # 3: usage_01541.pdb # 4: usage_01542.pdb # 5: usage_01543.pdb # 6: usage_01544.pdb # 7: usage_02664.pdb # # Length: 59 # Identity: 4/ 59 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 59 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 59 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01539.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_01540.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_01541.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_01542.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_01543.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_01544.pdb 1 --NSAVVLSAVKVLMKFMDYYATLLKKLAPPLVTLLSA--E-PEPQYVPLRNINLIVQK 54 usage_02664.pdb 1 DNEIIDCIVNKFMSFYKD--NLENIVDAIITLKYIMNNPDFKTTYAEVLGSRIADI--- 54 nsavvlsavkvlmkfm yatllkklappLvtllsa e pepqyVplrnInlI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################