################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:12 2021 # Report_file: c_1252_117.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00113.pdb # 2: usage_00128.pdb # 3: usage_00129.pdb # 4: usage_00585.pdb # 5: usage_00594.pdb # 6: usage_00669.pdb # 7: usage_01030.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 51 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 51 ( 72.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 ----PVIDSNPDE--DR-VAEAVCDAAEKWGFF--------QV---I---- 29 usage_00128.pdb 1 DVLL-MNP--VAR---EVPPALVTSALKKFPFV--------AV-------- 29 usage_00129.pdb 1 DVLL-MNP--VAR---EVPPALVTSALKKFPFV--------AV---D---- 30 usage_00585.pdb 1 -DIP-CLS---R-----SCTKCPQIVV------PDAQNELPK-FIL----- 29 usage_00594.pdb 1 DVLL-MNP--VAR---EVPPALVTSALKKFPFV--------AV---D---- 30 usage_00669.pdb 1 KTVL-VIA--DLGGC-P-PHMFYKSAAEKYNLV--------SF---I---- 31 usage_01030.pdb 1 ----TKLP--NNP---L-GDAAAGHLRKFGVKT--------DY----IARG 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################