################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:57 2021 # Report_file: c_0004_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00333.pdb # 6: usage_00358.pdb # # Length: 284 # Identity: 145/284 ( 51.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 215/284 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/284 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK 59 usage_00048.pdb 1 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK 59 usage_00049.pdb 1 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK 59 usage_00050.pdb 1 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-SVDIDK 59 usage_00333.pdb 1 VRSYKGHSHIVQDVVVSADGNYAVSASWDKTLRLWNLATGNSEARFVGHTGDVLSVAIDA 60 usage_00358.pdb 1 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 60 VRSfKGHSHIVQDctltADGaYAlSASWDKTLRLWdvATGetyqRFVGHksDV SVdIDk usage_00047.pdb 60 KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK- 111 usage_00048.pdb 60 KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK- 111 usage_00049.pdb 60 KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK- 111 usage_00050.pdb 60 KAS-IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN------SVTIISAGNDK- 111 usage_00333.pdb 61 NSSKIISASRDKTIRVWNTVGDCAYVLLGHTDWVTKVRVAPKNLVDDGRITFVSAGMDKI 120 usage_00358.pdb 61 KASMIISGSRDKTIKVWTIKGQCLATLLGHN-------------------DW-------- 93 kaS IISgSRDKTIkVWtikGqClatLLGHn t usage_00047.pdb 112 VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS 147 usage_00048.pdb 112 VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS 147 usage_00049.pdb 112 VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS 147 usage_00050.pdb 112 VKAWNLN-----------------------QFQIEADFIGH-NSNINTLTASPDGTLIAS 147 usage_00333.pdb 121 VRSWSLN-----------------------SYRIEADFIGH-NNYINVVQPSPDGSLAAS 156 usage_00358.pdb 94 VSQVRV-VPNEKADDDSVTIIKMVKAWNLNQFQIEADFIGHNSNI-NTLTASPDGTLIAS 151 V w l qfqIEADFIGH n NtltaSPDGtLiAS usage_00047.pdb 148 AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD 205 usage_00048.pdb 148 AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD 205 usage_00049.pdb 148 AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD 205 usage_00050.pdb 148 AGKDGEI-LWNLA-AKKAYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD 205 usage_00333.pdb 157 AGKDGQIYVWNLKHKSAFMNFDAKDEVFALAFSPSRFWLTAATASGIKIYDLENEVLIDE 216 usage_00358.pdb 152 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDD 211 AGKDGeI lWNLa k ytlsAqDEVFsLAFSPnRyWLaAATAtGIKvfsLdpqyLvDd usage_00047.pdb 206 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ--- 246 usage_00048.pdb 206 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ--- 246 usage_00049.pdb 206 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVTA 249 usage_00050.pdb 206 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ--- 246 usage_00333.pdb 217 LKPEFAGYTKAQDPHAVSLAWSADGQTLFAGYTDNVIRVWQ--- 257 usage_00358.pdb 212 LRPEFAGYSAAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ--- 252 LrPEFAGYskAaePHAVSLAWSADGQTLFAGYTDNVIRVWQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################