################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:30 2021 # Report_file: c_1256_231.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00038.pdb # 2: usage_00437.pdb # 3: usage_00438.pdb # 4: usage_00579.pdb # 5: usage_01666.pdb # 6: usage_02350.pdb # 7: usage_03516.pdb # 8: usage_03532.pdb # 9: usage_03533.pdb # 10: usage_03831.pdb # 11: usage_04248.pdb # 12: usage_04249.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 41 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -VILVDDV-LYTGRTVRAGMDALVDVG----R-PSSIQLAV 34 usage_00437.pdb 1 HVLIVEDI-VDTALTLNYLYHMYFTRR----P-ASLKTVVL 35 usage_00438.pdb 1 HVLIVEDI-VDTALTLNYLYHMYFTRR----P-ASLKTVVL 35 usage_00579.pdb 1 PVIVVH-GLFDSSYSFRHLLEYINETH----P-GTVVT-VL 34 usage_01666.pdb 1 -MKVLILE--DVIEHQVRLERILDEISKESNIPISYKTTG- 37 usage_02350.pdb 1 KVILVDDV-LYTGRTVRAAMDALVDVG----R-PSSIQLAV 35 usage_03516.pdb 1 HVLVLEDI-LDTALTLREVVDSLKKSE----P-ASIKTLVA 35 usage_03532.pdb 1 HVLVLEDI-LDTALTLREVVDSLKKSE----P-ASIKTLVA 35 usage_03533.pdb 1 HVLVLEDI-LDTALTLREVVDSLKKSE----P-ASIKTLVA 35 usage_03831.pdb 1 HVLIVEDI-VDTALTLNYLYHMYFTRR----P-ASLKTVVL 35 usage_04248.pdb 1 HVLVLEDI-LDTALTLREVVDSLKKSE----P-ASIKTLVA 35 usage_04249.pdb 1 HVLVLEDI-LDTALTLREVVDSLKKSE----P-ASIKTLVA 35 v s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################