################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:10 2021 # Report_file: c_0373_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00034.pdb # 6: usage_00048.pdb # 7: usage_00062.pdb # # Length: 124 # Identity: 49/124 ( 39.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/124 ( 85.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/124 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 -IWNVHGQ-FLTLES-GVEHDVHNAVFEAIHKEHKKLATPEE-ADFLAGKGVDKEKFLST 56 usage_00029.pdb 1 ----PHSKLFYALAALGVSEKVTPAVFNAIHKEKNYLLTPQAQADFLATQGVDKKKFLDA 56 usage_00032.pdb 1 -IWNVHGQMFLTLISMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLST 59 usage_00033.pdb 1 -IWNVHGQMFLTLISMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLST 59 usage_00034.pdb 1 -IWNVHGQMFLTLISMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLST 59 usage_00048.pdb 1 --------MFLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLST 52 usage_00062.pdb 1 GIWNVHGQMFLTLISMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLST 60 FltL s GVehdVhnAVFeAIHKEhkkLaTPee ADFLAgkGVDKeKFLst usage_00028.pdb 57 YNSFAIKGQ-EKAKKLA-AYQVTGVPT-VVNGKYRFDIGSAGGPEETLKLADYLIEKERA 113 usage_00029.pdb 57 YNSFSVQGQVKQSAELLKNYNIDGVPTIVVQGKYKTGPAYTNSLEGTAQVLDFLVKQVQD 116 usage_00032.pdb 60 YNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERA 119 usage_00033.pdb 60 YNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERA 119 usage_00034.pdb 60 YNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERA 119 usage_00048.pdb 53 YNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERA 112 usage_00062.pdb 61 YNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERA 120 YNSFaikGQ ekakkLa aYqvtGVPT VVnGKYrfdigsaggpEeTlklaDyLiekera usage_00028.pdb 114 AAKK 117 usage_00029.pdb 117 K--- 117 usage_00032.pdb 120 A--- 120 usage_00033.pdb 120 A--- 120 usage_00034.pdb 120 A--- 120 usage_00048.pdb 113 AA-- 114 usage_00062.pdb 121 A--- 121 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################