################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:57:14 2021 # Report_file: c_1261_40.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00419.pdb # 2: usage_00420.pdb # 3: usage_01202.pdb # 4: usage_01203.pdb # 5: usage_01204.pdb # 6: usage_01205.pdb # 7: usage_01206.pdb # 8: usage_01207.pdb # 9: usage_01208.pdb # 10: usage_02549.pdb # 11: usage_02550.pdb # 12: usage_02551.pdb # 13: usage_02557.pdb # 14: usage_02694.pdb # 15: usage_02695.pdb # 16: usage_02797.pdb # 17: usage_03784.pdb # 18: usage_03785.pdb # 19: usage_04089.pdb # 20: usage_04090.pdb # 21: usage_04311.pdb # 22: usage_04749.pdb # 23: usage_04750.pdb # # Length: 44 # Identity: 37/ 44 ( 84.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 44 ( 84.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 44 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00419.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_00420.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_01202.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_01203.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_01204.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_01205.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_01206.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRN 44 usage_01207.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_01208.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_02549.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_02550.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_02551.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_02557.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMG---- 39 usage_02694.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_02695.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_02797.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM----- 39 usage_03784.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_03785.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_04089.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_04090.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_04311.pdb 1 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 44 usage_04749.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 usage_04750.pdb 1 -YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWD 43 YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################