################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:50 2021 # Report_file: c_0385_65.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00074.pdb # 3: usage_00075.pdb # 4: usage_00251.pdb # 5: usage_00290.pdb # 6: usage_00362.pdb # # Length: 80 # Identity: 5/ 80 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 80 ( 16.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 80 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -------QSLVVRQGENCVLQCNYSVTPDNHLRWFKQDTGKGLVSLTVLVDQKDKT-SN- 51 usage_00074.pdb 1 -------QSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTK-SN- 51 usage_00075.pdb 1 -------QSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTK-SN- 51 usage_00251.pdb 1 QPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAV---DGFTFT-E----GDK-SLD 51 usage_00290.pdb 1 --------SLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEK-KK- 50 usage_00362.pdb 1 -------RNVTALMGKSAYLSCRVRNLANKTVSWIRHR---DIHILTVG----SYTYTSD 46 g l C W lt usage_00008.pdb 52 GRYSATLDKDAKHSTLHITA 71 usage_00074.pdb 52 GRYTATLDADTKQSSLHITA 71 usage_00075.pdb 52 GRYTATLDADTKQSSLHITA 71 usage_00251.pdb 52 GRIEVKGQH--GSSSLHIKD 69 usage_00290.pdb 51 GRISATLNTKEGYSYLYIKG 70 usage_00362.pdb 47 QRFQATHHQDTEDWTLQIKW 66 gR at s L I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################