################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:44 2021 # Report_file: c_0516_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00046.pdb # 2: usage_00063.pdb # 3: usage_00217.pdb # 4: usage_00218.pdb # 5: usage_00219.pdb # 6: usage_00246.pdb # 7: usage_00249.pdb # 8: usage_00276.pdb # 9: usage_00282.pdb # # Length: 118 # Identity: 100/118 ( 84.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/118 ( 85.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/118 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGYQV--MSLKQSEEGVTF-KMLSPERSIEIQHLL 56 usage_00063.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGY--------QSEEGVTF--MLSPERSIEIQHLL 49 usage_00217.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGFQV--MS--QSEEGVTFKS-LSPERSIEIQHLL 54 usage_00218.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGFQV------QSEEGVTFKSMLSPERSIEIQHLL 53 usage_00219.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGFQV--M---QSEEGVTF--MLSPERSIEIQHLL 52 usage_00246.pdb 1 -AERIAKLGGLHSFMGWDRPILTNSGGYQV------QSEEGVT---MLSPERSIEIQHLL 50 usage_00249.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSGGYQV--M---QSEEGVTF---LSPERSIEIQHLL 51 usage_00276.pdb 1 GAERIAKLGGLHSFMGWDRPILTDSGGYQVTK----QSEEGVTF--MLSPERSIEIQHLL 54 usage_00282.pdb 1 -AERIAKLGGLHSFMGWDRPILTDSG-Y--------QSEEGVT----LSPERSIEIQHLL 46 AERIAKLGGLHSFMGWDRPILTdSG QSEEGVT LSPERSIEIQHLL usage_00046.pdb 57 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 113 usage_00063.pdb 50 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 106 usage_00217.pdb 55 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 111 usage_00218.pdb 54 GSDIVMAFDEVTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 110 usage_00219.pdb 53 GSDIVMAFDEVTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 109 usage_00246.pdb 51 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 107 usage_00249.pdb 52 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGS 109 usage_00276.pdb 55 GSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 111 usage_00282.pdb 47 GSDIVMAFDE-TPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG- 102 GSDIVMAFDE TPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################