################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:06 2021 # Report_file: c_0819_1.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00024.pdb # 4: usage_00026.pdb # 5: usage_00078.pdb # 6: usage_00079.pdb # 7: usage_00080.pdb # 8: usage_00081.pdb # 9: usage_00082.pdb # 10: usage_00083.pdb # 11: usage_00084.pdb # 12: usage_00085.pdb # 13: usage_00086.pdb # 14: usage_00087.pdb # 15: usage_00093.pdb # 16: usage_00126.pdb # 17: usage_00127.pdb # 18: usage_00128.pdb # 19: usage_00129.pdb # # Length: 95 # Identity: 10/ 95 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 95 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 95 ( 43.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -PIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 54 usage_00012.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00024.pdb 1 -HCHLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPF----ELRKACEFFGRVV 55 usage_00026.pdb 1 -PIHCEYLTNGV-RA-SSISIVVGGKLWGLFSCHHSPKLIPY------PV-RSFQIFSQV 50 usage_00078.pdb 1 SPTHLEYMVNMGMHAAMSISIVRDNRLWGMISCHNLTPRFVS-----YEVRQACELIAQV 55 usage_00079.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00080.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00081.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00082.pdb 1 -PIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 54 usage_00083.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00084.pdb 1 -PIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 54 usage_00085.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00086.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00087.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00093.pdb 1 -PVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVREACDFAAQLLSMRI 59 usage_00126.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00127.pdb 1 -PIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 54 usage_00128.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 usage_00129.pdb 1 SPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIP-----YPVRMSFQIFSQV 55 p H eY Nmg A siSiv g LWGl CHh p v usage_00011.pdb 55 CSAIVERLEQGRIAELLRVSTERRLALARRA---- 85 usage_00012.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 89 usage_00024.pdb 56 FSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAA- 89 usage_00026.pdb 51 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 84 usage_00078.pdb 56 LTWQI------------------------------ 60 usage_00079.pdb 56 CSAI------------------------------- 59 usage_00080.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 89 usage_00081.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDAD 90 usage_00082.pdb 55 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 88 usage_00083.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDAD 90 usage_00084.pdb 55 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 88 usage_00085.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 89 usage_00086.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDAD 90 usage_00087.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDAD 90 usage_00093.pdb 60 AMEQSSQDASRRVELGHIQARLLKGMAA-A----- 88 usage_00126.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 89 usage_00127.pdb 55 CSAIVERLEQGRIAELLRVSTERRLALARRARDA- 88 usage_00128.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARD-- 88 usage_00129.pdb 56 CSAIVERLEQGRIAELLRVSTERRLALARRARDAD 90 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################