################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:05 2021 # Report_file: c_1437_38.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00342.pdb # 2: usage_00487.pdb # 3: usage_00488.pdb # 4: usage_00498.pdb # 5: usage_00499.pdb # 6: usage_00500.pdb # 7: usage_00501.pdb # 8: usage_00580.pdb # 9: usage_00581.pdb # 10: usage_00582.pdb # 11: usage_00583.pdb # 12: usage_00584.pdb # 13: usage_00585.pdb # 14: usage_00586.pdb # 15: usage_00587.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 60 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 60 ( 46.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 NYSTFINGLKKAGIEL-DRKILAD-AVR-------------DPQAFEQVVNKVKEALQVQ 45 usage_00487.pdb 1 --PAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 47 usage_00488.pdb 1 --PAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 47 usage_00498.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00499.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00500.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00501.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00580.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00581.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00582.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00583.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00584.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00585.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00586.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 usage_00587.pdb 1 -SPAMTTRG----FGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRF------- 48 pamttrg fgp eaeqvgn iad vraqvaeltkrf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################