################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:32 2021 # Report_file: c_1434_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00629.pdb # 2: usage_00823.pdb # 3: usage_00824.pdb # 4: usage_02640.pdb # 5: usage_02641.pdb # # Length: 179 # Identity: 140/179 ( 78.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 140/179 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/179 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00629.pdb 1 SL-SSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN 59 usage_00823.pdb 1 ---SSEALMRRAVSLVTDSTSTDLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN 57 usage_00824.pdb 1 --LSSEALMRRAVSLVTDSTSTDLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN 58 usage_02640.pdb 1 -----EALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN 55 usage_02641.pdb 1 ---SSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN 57 EALMRRAVSLVTDSTST LSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMN usage_00629.pdb 60 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN 119 usage_00823.pdb 58 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN 117 usage_00824.pdb 59 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN 118 usage_02640.pdb 56 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN 115 usage_02641.pdb 58 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN 117 SEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARN usage_00629.pdb 120 HIQLVKLQVEEVHQLSRKAETKLAEAQIEELKQKTQEEGEERAESEQEAYL-R------ 171 usage_00823.pdb 118 HIQLVKLQVEEVHQLSRKAETKLAEAQ-------------------------------- 144 usage_00824.pdb 119 HIQLVKLQVEEVHQLSRKAETKLAEA--------------------------------- 144 usage_02640.pdb 116 HIQLVKLQVEEVHQLSRKAETKLAEAQIEELRQKTQEEGEERAESEQEA--YLREDLEH 172 usage_02641.pdb 118 HIQLVKLQVEEVHQLSRKAETKLAEAQIEELRQKTQEEGEERAESEQEA---------- 166 HIQLVKLQVEEVHQLSRKAETKLAEA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################