################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:45 2021 # Report_file: c_0464_79.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00227.pdb # 2: usage_00369.pdb # 3: usage_00876.pdb # 4: usage_00877.pdb # 5: usage_01005.pdb # # Length: 106 # Identity: 7/106 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/106 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/106 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00227.pdb 1 -GIYIDDTPSIRVSDIRAKCRRLKQES-GLGMIVIDYLQLIQ-----EVSEISRSLKALA 53 usage_00369.pdb 1 HLFIDD-TYNANPTSMRAAAQVLLQQNGI-KVMVMGDIG---EL---SWQEHHDLGRDLA 52 usage_00876.pdb 1 HLFIDD-TYNANPTSMRAAAQVLLQQNGI-KVMVMGDIG---ELGDSSWQEHHDLGRDLA 55 usage_00877.pdb 1 HLFIDD-TYNANPTSMRAAAQVLLQQNGI-KVMVMGDIG---ELGDSSWQEHHDLGRDLA 55 usage_01005.pdb 1 -RVIDD-SYNANPASMLAAIDILSGFSGR-TVLVLGDMG--------AEQAHREVGAYAA 49 idD tynanp smrAa L q v V gd g qeh g lA usage_00227.pdb 54 RELEVPVIALSQLRPMMSDIRESGSIEQDAD-----I----VAFL- 89 usage_00369.pdb 53 ELPLDHIVAVGQ------------FASAALEGT-KL-----KAFQ- 79 usage_00876.pdb 56 ELPLDHIVAVGQ------------FASAALEGA-GLHSTKLKAFQ- 87 usage_00877.pdb 56 ELPLDHIVAVGQ------------FASAALEGA-TKL----KAF-Q 83 usage_01005.pdb 50 GK-VSALYAVGP------------LMAHAVQAFGATG----RHFA- 77 Avgq a aF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################