################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:25:07 2021 # Report_file: c_0447_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00049.pdb # 2: usage_00060.pdb # 3: usage_00061.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00115.pdb # 7: usage_00146.pdb # 8: usage_00147.pdb # 9: usage_00167.pdb # 10: usage_00173.pdb # 11: usage_00181.pdb # 12: usage_00182.pdb # 13: usage_00204.pdb # 14: usage_00205.pdb # 15: usage_00206.pdb # # Length: 102 # Identity: 18/102 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/102 ( 31.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/102 ( 34.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 --GSMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGL 56 usage_00060.pdb 1 --MEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGL 56 usage_00061.pdb 1 --MEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGL 56 usage_00064.pdb 1 --MEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGL 56 usage_00065.pdb 1 --MEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGL 56 usage_00115.pdb 1 KERELR-LLMLGLDNAGKTTILKKFNG-EDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 58 usage_00146.pdb 1 --KEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 56 usage_00147.pdb 1 --KEMR-ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 56 usage_00167.pdb 1 -----R-LLLLGADNSGKSTIVKQMR--------------FETKFQVDKVNFHMFDVGGQ 40 usage_00173.pdb 1 ------R-ILLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 52 usage_00181.pdb 1 -------ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 52 usage_00182.pdb 1 -------ILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 52 usage_00204.pdb 1 --REMR-ILILGLDGAGKTTILYRLQVGE-VVTTIPTIGFNVETVTYKNLKFQVWDLGGQ 56 usage_00205.pdb 1 --REMR-ILILGLDGAGKTTILYRLQVGE-VVTTIPTIGFNVETVTYKNLKFQVWDLGGQ 56 usage_00206.pdb 1 --REMR-ILILGLDGAGKTTILYRLQVGE-VVTTIPTIGFNVETVTYKNLKFQVWDLGGQ 56 l LGlD aGKtTIl n t kf wD GG usage_00049.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 98 usage_00060.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 98 usage_00061.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRI------------- 85 usage_00064.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 98 usage_00065.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRI------------- 85 usage_00115.pdb 59 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVE 100 usage_00146.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRI------------- 85 usage_00147.pdb 57 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 98 usage_00167.pdb 41 RDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNN 82 usage_00173.pdb 53 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 94 usage_00181.pdb 53 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 94 usage_00182.pdb 53 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 94 usage_00204.pdb 57 TSIRPYWRCYYSNTDAVIYVVDSCDRDRI------------- 85 usage_00205.pdb 57 TSIRPYWRCYYSNTDAVIYVVDSCDRDRI------------- 85 usage_00206.pdb 57 TSIRPYWRCYYSNTDAVIYVVDSCDRDRI------------- 85 R Wr y t I VVD Dr R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################