################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:58 2021 # Report_file: c_0241_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00026.pdb # 8: usage_00032.pdb # 9: usage_00038.pdb # 10: usage_00039.pdb # # Length: 137 # Identity: 23/137 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/137 ( 54.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/137 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -NGYLIDLDGTMYR-GTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 58 usage_00007.pdb 1 -NGYLIDLDG-TMY----RIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 54 usage_00008.pdb 1 -NGYLIDLDGTMYR-GTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 58 usage_00009.pdb 1 -NGYLIDLDG-TMY----RIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 54 usage_00021.pdb 1 -NGYLIDLDGTMYR-GTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 58 usage_00022.pdb 1 -NGYLIDLDG-TMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 58 usage_00026.pdb 1 MVAIIFDMDG-VLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 usage_00032.pdb 1 -KGYLIDLDGTMYN-GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDI 58 usage_00038.pdb 1 -NGYLIDLDGTMYR-GTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 58 usage_00039.pdb 1 -NGYLIDLDG-TMY-------AASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDI 51 gyliDlDG a fi L iPylFvTNNStrTPeqvadKLvs dI usage_00006.pdb 59 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 118 usage_00007.pdb 55 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 114 usage_00008.pdb 59 PATPEQIFTSSMATANYVYDLDQSAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 118 usage_00009.pdb 55 PATPEQIFTSSMATANYVYDLDQSAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 114 usage_00021.pdb 59 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 118 usage_00022.pdb 59 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 118 usage_00026.pdb 60 DVSSSIIITSGLATRLYMSKHLDPGKIFVIGGEGLVKEMQALGWGIV------------- 106 usage_00032.pdb 59 PATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQAIEENGLTFGGENADFVVVGIDR 118 usage_00038.pdb 59 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 118 usage_00039.pdb 52 PATPEQIFTSSMATANYVYDLDQNAMIYFIGEEGLYKALKEKGFSFADENADVVIVGLDR 111 pat eqifTssmATa y a iy IGeEGl ka e G f usage_00006.pdb 119 EVTYEKLAVACLAVRNG 135 usage_00007.pdb 115 EVTYEKLAVACLAVRNG 131 usage_00008.pdb 119 EVTYEKLAVACLAVRNG 135 usage_00009.pdb 115 EVTYEKLAVACLAVRNG 131 usage_00021.pdb 119 EVTYEKLAVACLAVRNG 135 usage_00022.pdb 119 EVTYEKLAVACLAVRNG 135 usage_00026.pdb 107 -----TLDEARQG---- 114 usage_00032.pdb 119 SITYEKFAVGCLAIRNG 135 usage_00038.pdb 119 EVTYEKLAVACLAVRNG 135 usage_00039.pdb 112 EVTYEKLAVACLAVRNG 128 klavacla #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################