################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:45 2021 # Report_file: c_1111_95.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00362.pdb # 2: usage_00365.pdb # 3: usage_00366.pdb # 4: usage_00675.pdb # # Length: 93 # Identity: 1/ 93 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 93 ( 10.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 93 ( 55.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00362.pdb 1 --HPIMETIVN-------------DSN---YDWLFQLLNALTVG----DFDKFDSL--IK 36 usage_00365.pdb 1 -----METIVN-------------DSN---YDWLFQLLNALTVG----DFDKFDSL--IK 33 usage_00366.pdb 1 DFNSFYYTSLLYLSTLEPSTSITLAER---QQLAYDLSISALLGDKIYNFGELLHHPIME 57 usage_00675.pdb 1 -----HPVLES-------------LR-NTDRQWLIDTLYAFNSG----NV--ERFQ--TL 33 t wl ll a G f usage_00362.pdb 37 VQISKI-PILAQH-------------------- 48 usage_00365.pdb 34 VQISKI-PILAQHE------------------- 46 usage_00366.pdb 58 TIVNDS--NYDWLF-----------QLLNALTV 77 usage_00675.pdb 34 KTAWGQQPDLAANEAQLLRKIQLLCLMEMTF-- 64 la #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################