################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:53:14 2021 # Report_file: c_0270_42.html ################################################################################################ #==================================== # Aligned_structures: 2 # 1: usage_00131.pdb # 2: usage_00239.pdb # # Length: 243 # Identity: 216/243 ( 88.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 216/243 ( 88.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/243 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 KKLKNIAHKNVLSFLNRINNRIALDHHNLGFLYTPSCTAEYRINGDVKALEATIKAADKL 60 usage_00239.pdb 1 KKLKNIAHKNVLSFLNRINNRIALDHHDLGFLYTPSCTAEYRINGDVKALEATIKAADKL 60 KKLKNIAHKNVLSFLNRINNRIALDHH LGFLYTPSCTAEYRINGDVKALEATIKAADKL usage_00131.pdb 61 MERYQELIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHT-F--- 116 usage_00239.pdb 61 MER-Y-LIINCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDP 118 MER LII CLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHT usage_00131.pdb 117 -----------------SSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE 159 usage_00239.pdb 119 ETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE 178 SSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE usage_00131.pdb 160 DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE 219 usage_00239.pdb 179 DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE 238 DKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE usage_00131.pdb 220 QYS 222 usage_00239.pdb 239 QYS 241 QYS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################