################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:01 2021 # Report_file: c_1027_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00034.pdb # 4: usage_00071.pdb # 5: usage_00327.pdb # 6: usage_00411.pdb # 7: usage_00464.pdb # # Length: 44 # Identity: 10/ 44 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 44 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 44 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -APILCDARMVAEGITRS-RLPADNRVIYTLSDPSVPELAKK-- 40 usage_00005.pdb 1 GAPILCDARMVAEGITRS-RLPADNRVIYTLSDPSVPELAKK-- 41 usage_00034.pdb 1 -CTIICDSE-VRAGIYSRPVLE-RNRVVCYLNDVRSKEADV--- 38 usage_00071.pdb 1 GAPILCDAEMVAHGVTRA-RLPAGNEVICTLRDPRTPALAAE-- 41 usage_00327.pdb 1 --PILCDARMVSEGITRA-RLPAKNEVICTLQDPRVPALAQEM- 40 usage_00411.pdb 1 --PILCDARMVSEGITRA-RLPAKNEVICTLQDPRVPALAQEMG 41 usage_00464.pdb 1 -APILCDAEMVAHGVTRA-RLPAGNEVICTLRDPRTPALAAE-- 40 pIlCDa V G tr rLp N Vi tL Dp p la #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################