################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:56 2021 # Report_file: c_0527_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00011.pdb # 4: usage_00068.pdb # 5: usage_00075.pdb # # Length: 124 # Identity: 33/124 ( 26.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/124 ( 36.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/124 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -TFSIYM--LRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLM 57 usage_00009.pdb 1 -TFSIYM--LRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLM 57 usage_00011.pdb 1 --FGIYM--VNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDM 56 usage_00068.pdb 1 PTFAIYFNL----EDWLLNQGGLDKVHEKNSQKAT-LYECIDLSNGFYKGHADKKDRSLN 55 usage_00075.pdb 1 -TFAWYL--SGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRT-GFYRNDVAITNRSWM 56 F iY W GG N KA Y ID s GFY g RS m usage_00008.pdb 58 NVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFK 117 usage_00009.pdb 58 NVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFK 117 usage_00011.pdb 57 NITFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFK 116 usage_00068.pdb 56 VSFNIAKNKDLEPLFVKEAEEAG-IGLKGHRILGGIRASIYNALNLDQVKTLCEFKEFQG 114 usage_00075.pdb 57 NVPFQMADASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFE 116 n f L F a G gL GHR GG RASIYNA p aL m f usage_00008.pdb 118 ENA- 120 usage_00009.pdb 118 ENA- 120 usage_00011.pdb 117 RSRG 120 usage_00068.pdb 115 -K-- 115 usage_00075.pdb 117 RR-- 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################