################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:34 2021 # Report_file: c_1194_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00061.pdb # 2: usage_00087.pdb # 3: usage_00092.pdb # 4: usage_00451.pdb # 5: usage_00550.pdb # 6: usage_00605.pdb # # Length: 36 # Identity: 2/ 36 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 36 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 36 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 SCMVKFELSSSKWHMTS-PKPHCVNTTS-------- 27 usage_00087.pdb 1 -CMVKFELSSSKWHMTS-PKPHCVNTTS-------- 26 usage_00092.pdb 1 -CMVKFELSSSKWHMTS-PKPHCVNTTS-------- 26 usage_00451.pdb 1 -VY-SFRDSKHRWDP------KNQRPELWNVYNGNV 28 usage_00550.pdb 1 -CVAKFGPLPSKWQMEP-PKPSCVNKIS-------- 26 usage_00605.pdb 1 -CLAKFELLTSKWQMTSRKP-PCVNSLP-------- 26 c kF skW m cvn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################