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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:49:04 2021
# Report_file: c_0601_1.html
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#====================================
# Aligned_structures: 8
#   1: usage_00001.pdb
#   2: usage_00007.pdb
#   3: usage_00008.pdb
#   4: usage_00009.pdb
#   5: usage_00013.pdb
#   6: usage_00112.pdb
#   7: usage_00113.pdb
#   8: usage_00114.pdb
#
# Length:         73
# Identity:       22/ 73 ( 30.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     66/ 73 ( 90.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            7/ 73 (  9.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  --SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   58
usage_00007.pdb         1  -SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   59
usage_00008.pdb         1  --SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   58
usage_00009.pdb         1  ------LLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   54
usage_00013.pdb         1  --SR-RLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDN-PPYDKGAFRIEINFPA   56
usage_00112.pdb         1  --SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   58
usage_00113.pdb         1  PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   60
usage_00114.pdb         1  -SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI   59
                                 LllELkglqeepvegFRvtlVDEgdLynWevaIfgpp tyYegGyFkarlkFPi

usage_00001.pdb        59  DYPYSPPAFRFLT   71
usage_00007.pdb        60  DYPYSPPAFRFLT   72
usage_00008.pdb        59  DYPYSPPAFRFLT   71
usage_00009.pdb        55  DYPYSPPAFRFLT   67
usage_00013.pdb        57  EYPFKPPKITFKT   69
usage_00112.pdb        59  DYPYSPPAFRFLT   71
usage_00113.pdb        61  DYPYSPPAFRFLT   73
usage_00114.pdb        60  DYPYSPPAFRFLT   72
                           dYPysPPafrFlT


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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