################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:09 2021 # Report_file: c_1347_29.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00008.pdb # 2: usage_00077.pdb # 3: usage_00084.pdb # 4: usage_00115.pdb # 5: usage_00202.pdb # 6: usage_00221.pdb # 7: usage_00236.pdb # 8: usage_00237.pdb # 9: usage_00266.pdb # 10: usage_00267.pdb # # Length: 47 # Identity: 4/ 47 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 47 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 47 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG-QILTVS 45 usage_00077.pdb 1 ----HSTLAGLHPVGR-GEIRDVVDAVLYLEH--AGFITG-EILHVD 39 usage_00084.pdb 1 ----SKEILDRIPAGRWGLPQDLMGPSVFLASSASDYING-YTIAVD 42 usage_00115.pdb 1 ----FETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG-AILAVD 42 usage_00202.pdb 1 ----KTRIANSIPMGRFGTVQELAPAYVFFASHAASGYITGQILDVN 43 usage_00221.pdb 1 --GLLNALAAQVP-GRVGRAEEVAAAALFLASDDSSFVTG-AELFVD 43 usage_00236.pdb 1 -----ARRLAKYPIGRFGTPEDIAEAVIFLLSDQAAFVTG-AAFAVD 41 usage_00237.pdb 1 -----ARRLAKYPIGRFGTPEDIAEAVIFLLSDQAAFVTG-AAFAVD 41 usage_00266.pdb 1 RPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG-AILAVD 46 usage_00267.pdb 1 ----FETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG-AILAVD 42 P gR G a fl s g V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################