################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1473_140.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00388.pdb # 2: usage_00557.pdb # 3: usage_00629.pdb # 4: usage_00790.pdb # 5: usage_01095.pdb # 6: usage_01096.pdb # 7: usage_01800.pdb # 8: usage_01845.pdb # 9: usage_02350.pdb # 10: usage_02480.pdb # 11: usage_02636.pdb # 12: usage_02747.pdb # # Length: 26 # Identity: 0/ 26 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 26 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 26 ( 73.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00388.pdb 1 SAKNAYTKLGTDDNA--QLLD----- 19 usage_00557.pdb 1 ----SHADTATKS-----KN-RFVV- 15 usage_00629.pdb 1 ----SHADTATKSGST-TKN-RFVV- 19 usage_00790.pdb 1 --SKADYNLLSNPNS------KHR-L 17 usage_01095.pdb 1 ----VHEDAKRSD-KGP-KN-RYTV- 18 usage_01096.pdb 1 ----VHEDAKRSD-KGP-KN-RYTV- 18 usage_01800.pdb 1 ----SHADTATKSGST-TKN-RFVV- 19 usage_01845.pdb 1 ----SHADTAT-------KN-RFVV- 13 usage_02350.pdb 1 ----SHADTATKS-----KN-RFVV- 15 usage_02480.pdb 1 --SKADYNLLSNPNS------KHR-L 17 usage_02636.pdb 1 ----SHADTAT----T-TKN-RFVV- 15 usage_02747.pdb 1 ----FHDDARKA------KN-KYVV- 14 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################