################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:34:24 2021 # Report_file: c_1252_50.html ################################################################################################ #==================================== # Aligned_structures: 40 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00038.pdb # 5: usage_00039.pdb # 6: usage_00040.pdb # 7: usage_00041.pdb # 8: usage_00042.pdb # 9: usage_00151.pdb # 10: usage_00181.pdb # 11: usage_00618.pdb # 12: usage_00629.pdb # 13: usage_00630.pdb # 14: usage_00631.pdb # 15: usage_00632.pdb # 16: usage_00882.pdb # 17: usage_00883.pdb # 18: usage_00889.pdb # 19: usage_00891.pdb # 20: usage_00929.pdb # 21: usage_00930.pdb # 22: usage_01044.pdb # 23: usage_01045.pdb # 24: usage_01046.pdb # 25: usage_01059.pdb # 26: usage_01060.pdb # 27: usage_01169.pdb # 28: usage_01170.pdb # 29: usage_01171.pdb # 30: usage_01172.pdb # 31: usage_01180.pdb # 32: usage_01197.pdb # 33: usage_01293.pdb # 34: usage_01294.pdb # 35: usage_01634.pdb # 36: usage_01635.pdb # 37: usage_01664.pdb # 38: usage_01683.pdb # 39: usage_01684.pdb # 40: usage_01685.pdb # # Length: 52 # Identity: 17/ 52 ( 32.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 52 ( 32.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 52 ( 67.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 GPIR----TG---------------A--Q----IQLLEEGWDQRAPIGWNMK 27 usage_00036.pdb 1 GPIR----T--------------------------LLEEGWDQRAPIGWNMK 22 usage_00037.pdb 1 GPIR----T-------------------Q----IQLLEEGWDQRAPIGWNMK 25 usage_00038.pdb 1 GPIR----T---------ALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 33 usage_00039.pdb 1 GPIR----T--------------------------LLEEGWDQRAPIGWNMK 22 usage_00040.pdb 1 GPIR----T--------------------------LLEEGWDQRAPIGWNMK 22 usage_00041.pdb 1 GPIR----T--------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 34 usage_00042.pdb 1 GPIR----T--------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 34 usage_00151.pdb 1 GPIR----TLA--------------A--Q----IQLLEEGWDQRAPIGWNMK 28 usage_00181.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00618.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00629.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00630.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00631.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00632.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00882.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00883.pdb 1 GPIR----TLAMSAIV---------GGALGEAGIQLLEEGWDQRAPIGWNMK 39 usage_00889.pdb 1 GPIR----TLAMSAI----------A--Q----IQLLEEGWDQRAPIGWNMK 32 usage_00891.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----AQLLEEGWDQRAPIGWNMK 42 usage_00929.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_00930.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_01044.pdb 1 GPIR-----------------EEAGA--Q----IQLLEEGWDQRAPIGWNMK 29 usage_01045.pdb 1 GPIR-----------------EEAGA--Q----IQLLEEGWDQRAPIGWNMK 29 usage_01046.pdb 1 GPIR----T----------------A--Q----IQLLEEGWDQRAPIGWNMK 26 usage_01059.pdb 1 GPIR----TLAMSAGE------EAGA--Q----IQLLEEGWDQRAPIGWNMK 36 usage_01060.pdb 1 GPIR----T-------------------Q----IQLLEEGWDQRAPIGWNMK 25 usage_01169.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_01170.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_01171.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_01172.pdb 1 GPIR----TLAMSAIVGGALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 42 usage_01180.pdb 1 GPIR----T------------------------IQLLEEGWDQRAPIGWNMK 24 usage_01197.pdb 1 GPIR----T--------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 34 usage_01293.pdb 1 GPIR----T--------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 34 usage_01294.pdb 1 GPIR----TL-------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 35 usage_01634.pdb 1 GPIR----TLAMSAIV---------GGAL----IQLLEEGWDQRAPIGWNMK 35 usage_01635.pdb 1 GPIR----TLAMSAIV---------GGAL----IQLLEEGWDQRAPIGWNMK 35 usage_01664.pdb 1 GPIR----T--------GALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 34 usage_01683.pdb 1 ----GPIR-----------LGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 31 usage_01684.pdb 1 ----GPIR----------ALGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 32 usage_01685.pdb 1 ----GPIR-----------LGEEAGA--Q----IQLLEEGWDQRAPIGWNMK 31 LLEEGWDQRAPIGWNMK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################