################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:06 2021 # Report_file: c_0865_10.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00099.pdb # 4: usage_00100.pdb # 5: usage_00101.pdb # # Length: 103 # Identity: 46/103 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/103 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/103 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNS-DFYRNDVAKRNRSRMNV 58 usage_00006.pdb 1 -TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNS-DFYRNDVAKRNRSRMNV 58 usage_00099.pdb 1 --FSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNI 58 usage_00100.pdb 1 PCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNI 60 usage_00101.pdb 1 -CFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNI 59 F Y GLV W K NGG A M K K Y IDNS FY V NRS MN usage_00005.pdb 59 PFQL-A---DSALDKLFLEESFAAGLHALKGHRVVGGMRASI- 96 usage_00006.pdb 59 PFQL-A---DSALDKLFLEESFAAGLHALKGHRVVGGMRASI- 96 usage_00099.pdb 59 PFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLY 101 usage_00100.pdb 61 PFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASL- 102 usage_00101.pdb 60 PFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASL- 101 PF D AL K FL LKGHR VGG RAS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################