################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:32 2021 # Report_file: c_1122_19.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00022.pdb # 2: usage_00146.pdb # 3: usage_00147.pdb # # Length: 195 # Identity: 41/195 ( 21.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/195 ( 83.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/195 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 --STIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLV 58 usage_00146.pdb 1 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLG 60 usage_00147.pdb 1 --ASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLG 58 asIVtgVEEGRlIfdNlKksIaYtltSNipEitpflifiianiPlpLgtVtiLcidLg usage_00022.pdb 59 TDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFF------RYMAIGGYVGAATVGAA 112 usage_00146.pdb 61 TDMVPAISLAYEQAESDIMKRQPRNPKT--DKLVN--ERLISMAYGQIGMIQALGGFFTY 116 usage_00147.pdb 59 TDMVPAISLAYEQAESDIMKRQPRNPKT--DKLVN--ERLISMAYGQIGMIQALGGFFTY 114 TDmvPAisLayeqaesDIMkRqPRnPKt dklvn aYgqIGmiqalggffty usage_00022.pdb 113 AWWFMYAEDGPGVTYHQLTHF---MQCTEDHPHF-----------DCEIFEAPEPMTMAL 158 usage_00146.pdb 117 FVILA-E-NGFLP-IHLLGLRVNWDDRWIND---VEDSYGQQWTYEQRKIVEFTCHTAFF 170 usage_00147.pdb 115 FVILA-E-NGFLP-IHLLGLRVNWDDRWIND---VEDSYGQQWTYEQRKIVEFTCHTAFF 168 fvila e nGflp iHlLglr ddrwind eqrkiveftchTaff usage_00022.pdb 159 SVLVTIEMCNALNSL 173 usage_00146.pdb 171 VSIVVVQWADLVICK 185 usage_00147.pdb 169 VSIVVVQWADLVICK 183 vsiVvvqwadlvick #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################