################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:49 2021 # Report_file: c_1485_21.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00288.pdb # 2: usage_00290.pdb # 3: usage_00469.pdb # 4: usage_01046.pdb # 5: usage_01048.pdb # # Length: 74 # Identity: 45/ 74 ( 60.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 74 ( 64.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 74 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 ------------RMANNARERVRVRDINEAFRELGRMCQLHLK---AQTKLLILQQAVQV 45 usage_00290.pdb 1 -----------RRMANNARERVRVRDINEAFRELGRMCQLHLKSD--QTKLLILQQAVQV 47 usage_00469.pdb 1 -----------------ALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQV 43 usage_01046.pdb 1 ---EKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQV 57 usage_01048.pdb 1 SLEEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQV 60 ArERvRvRDINEAFRELGRMCQ HLK QTKLLILQQAVQV usage_00288.pdb 46 ILGLEQQVRE---- 55 usage_00290.pdb 48 ILGLEQQVRER--- 58 usage_00469.pdb 44 ILGLEQQVRER--- 54 usage_01046.pdb 58 ILGLEQQVRERNLN 71 usage_01048.pdb 61 ILGLEQQVRERNL- 73 ILGLEQQVRE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################