################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:21:53 2021 # Report_file: c_1394_113.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00235.pdb # 2: usage_00404.pdb # 3: usage_00620.pdb # 4: usage_00621.pdb # 5: usage_00622.pdb # 6: usage_00623.pdb # 7: usage_00649.pdb # 8: usage_00840.pdb # 9: usage_00841.pdb # 10: usage_00952.pdb # 11: usage_00953.pdb # 12: usage_00956.pdb # 13: usage_01003.pdb # 14: usage_01038.pdb # 15: usage_01039.pdb # 16: usage_01040.pdb # 17: usage_01041.pdb # 18: usage_01093.pdb # 19: usage_01094.pdb # 20: usage_01095.pdb # 21: usage_01101.pdb # 22: usage_01232.pdb # 23: usage_01285.pdb # # Length: 58 # Identity: 40/ 58 ( 69.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 58 ( 69.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 58 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00235.pdb 1 ----------KFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKE--- 45 usage_00404.pdb 1 ----------KFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 48 usage_00620.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_00621.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_00622.pdb 1 -------------LIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKE--- 42 usage_00623.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_00649.pdb 1 --ATAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 56 usage_00840.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_00841.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_00952.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKE--- 41 usage_00953.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_00956.pdb 1 TKATAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKE--- 55 usage_01003.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_01038.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_01039.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_01040.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_01041.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 43 usage_01093.pdb 1 -KATAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 57 usage_01094.pdb 1 ----------KFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 47 usage_01095.pdb 1 -KATAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 56 usage_01101.pdb 1 --------------IPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 44 usage_01232.pdb 1 ---------------PMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKEL-- 41 usage_01285.pdb 1 ---------IKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQ- 48 PMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################