################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:42 2021 # Report_file: c_0615_12.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00141.pdb # 2: usage_00145.pdb # 3: usage_00172.pdb # 4: usage_00173.pdb # 5: usage_00174.pdb # 6: usage_00175.pdb # 7: usage_00176.pdb # 8: usage_00177.pdb # 9: usage_00209.pdb # # Length: 115 # Identity: 66/115 ( 57.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/115 ( 79.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/115 ( 20.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLGGV----QNY-NVMGVAKASLEANVKYLALDLGP 55 usage_00145.pdb 1 YSLTIVAHEAKKLMPEGGSIVATT-------------NVMGVAKASLEANVKYLALDLGP 47 usage_00172.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 usage_00173.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 usage_00174.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 usage_00175.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 usage_00176.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 usage_00177.pdb 1 -SLTAVAREAKKVMTEGGNILTLTYLG-GERVVK-NYNVMGVAKASLEASVKYLANDLGQ 57 usage_00209.pdb 1 YSLTIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGP 58 SLTiVAhEAKKlMpEGGsIvatT NVMGVAKASLEAnVKYLAlDLGp usage_00141.pdb 56 DNIRVNAISAGPIRT------GGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 104 usage_00145.pdb 48 DNIRVNAISAGPIR----------NTILKEIEERAPLKRNVDQVEVGKTAAYLLS 92 usage_00172.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 113 usage_00173.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 113 usage_00174.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 113 usage_00175.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 113 usage_00176.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 113 usage_00177.pdb 58 HGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAVFLFS 112 usage_00209.pdb 59 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLS 113 dnIRVNAISAGPIR NtILkEIeERAPLkRnvdQvEVGkTAayLlS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################