################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:16 2021 # Report_file: c_0190_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00032.pdb # 2: usage_00060.pdb # 3: usage_00061.pdb # 4: usage_00062.pdb # 5: usage_00063.pdb # 6: usage_00084.pdb # 7: usage_00085.pdb # # Length: 193 # Identity: 90/193 ( 46.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/193 ( 53.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/193 ( 4.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 NEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFA 60 usage_00060.pdb 1 TENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYA 60 usage_00061.pdb 1 TENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYA 60 usage_00062.pdb 1 TENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYA 60 usage_00063.pdb 1 TENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYA 60 usage_00084.pdb 1 SEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFA 60 usage_00085.pdb 1 SEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFA 60 E aFIeNL R IYTYIG V S NP L IY Y g YE pPH A usage_00032.pdb 61 LSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCG-K---GAEVNQVKEQL 116 usage_00060.pdb 61 LANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ---SPNGERISKML 117 usage_00061.pdb 61 LANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ---SPNGERISKML 117 usage_00062.pdb 61 LANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ---SPNGERISKML 117 usage_00063.pdb 61 LANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ---SPNGERISKML 117 usage_00084.pdb 61 VADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCP-APERGG---AVRDRL 116 usage_00085.pdb 61 VADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCP-APERGG---AVRDRL 116 a YR R Q v IsGESGAGKTEA K qf L usage_00032.pdb 117 LQSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGE 176 usage_00060.pdb 118 LDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGE 177 usage_00061.pdb 118 LDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGE 177 usage_00062.pdb 118 LDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGE 177 usage_00063.pdb 118 LDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGE 177 usage_00084.pdb 117 LQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGE 176 usage_00085.pdb 117 LQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGE 176 L SnP LEAFGNAKTlRNDNSSRFGKYM qF G P GG I YLLEKSRVV GE usage_00032.pdb 177 RNFHVFYQLLS-- 187 usage_00060.pdb 178 RSFHIFYQMLK-- 188 usage_00061.pdb 178 RSFHIFYQMLK-- 188 usage_00062.pdb 178 RSFHIFYQMLK-- 188 usage_00063.pdb 178 RSFHIFYQMLK-- 188 usage_00084.pdb 177 RNFHIFYQLLEGG 189 usage_00085.pdb 177 RNFHIFYQLLEGG 189 R FHiFYQ L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################