################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:07 2021 # Report_file: c_0517_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00045.pdb # 2: usage_00081.pdb # 3: usage_00082.pdb # 4: usage_00094.pdb # 5: usage_00100.pdb # 6: usage_00152.pdb # 7: usage_00157.pdb # # Length: 145 # Identity: 12/145 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/145 ( 21.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/145 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 TPEDFRDVMDINVTGTWNTVMAGAPRI-IEGGRGGSIILISSAA--G---MKMQPFMIHY 54 usage_00081.pdb 1 TEEKFEKVINANLTGAFRVAQRASRSM-QRNK-FGRMIFIGSVS--GSWG------QANY 50 usage_00082.pdb 1 -EEKFEKVINANLTGAFRVAQRASRSM-QRNK-FGRMIFIGSVSG----------NQANY 47 usage_00094.pdb 1 -EEKFEKVINANLTGAFRVAQRASRSM-QRNK-FGRMIFIASV-------------QANY 44 usage_00100.pdb 1 SSKGWHAVLETNLTGTFYMCKAVYSSWMKE-H-GGSIVNIIVP---T---KAGFPLAVHS 52 usage_00152.pdb 1 ---EWFDVVNTNLNSLYRLSKAVLRGM-TKAR-WGRIINIGSVV-A---------GQTNY 45 usage_00157.pdb 1 -------------KGVAYSIKPFIEGM-YERK-AGSIVAISSIS--G---ERGNVGQTNY 40 g G I s y usage_00045.pdb 55 TASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVT-AVGQAMETNPQLSHV 113 usage_00081.pdb 51 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----ALDE---RIQQGALQ- 101 usage_00082.pdb 48 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----ALDE---RIQQGALQ- 98 usage_00094.pdb 45 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----ALD------QQGALQ- 92 usage_00100.pdb 53 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV----ENYGSWGQSFFEGSFQ- 107 usage_00152.pdb 46 AAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTR-----ELPE---AQREALLG- 96 usage_00157.pdb 41 SATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMTL-----AIRE---DIREKITK- 91 A kagv g A E N VaPG i t m usage_00045.pdb 114 LTPF-LPDWVAEPEDIADTVCWLAS 137 usage_00081.pdb 102 ---FIPAKRVGTPAEVAGVVSFLAS 123 usage_00082.pdb 99 ---FIPAKRVGTPAEVAGVVSFLAS 120 usage_00094.pdb 93 ---FIPAKRVGTPAEVAGVVSFLAS 114 usage_00100.pdb 108 ---KIPAKRIGVPEEVSSVVCFLLS 129 usage_00152.pdb 97 ---QIPLGRLGQAEEIAKVVGFLAS 118 usage_00157.pdb 92 ---EIPFRRFGKPEEIAWAVAFLLS 113 p r g p e a V fL S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################