################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:55 2021 # Report_file: c_1114_70.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00005.pdb # 2: usage_00108.pdb # 3: usage_00269.pdb # 4: usage_00360.pdb # 5: usage_00361.pdb # # Length: 73 # Identity: 0/ 73 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 73 ( 8.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 73 ( 60.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 --ARAAMW-------NPSIFLKEGLRPLEEVMQKYIRYAVQYD-N---HYT----NTKYC 43 usage_00108.pdb 1 KEEAQETRAQIIEAAERAFY----KRGVART--TLADI-AELAGVTRGAIYWHFNNKAEL 53 usage_00269.pdb 1 ----DERRRSITAAAWRLIA----ARGIEAA--NMRDI-ATEAGYTNGALSHYFA----- 44 usage_00360.pdb 1 ---SEKTRTAILLAAEELFL----EKGVSHT--SLEQI-ARAAGVTRGAVYWHFQNKAHL 50 usage_00361.pdb 1 ----EKTRTAILLAAEELFL----EKGVSHT--SLEQI-ARAAGVTRGAVYWHFQNKAHL 49 r g i a a a usage_00005.pdb 44 LCQMLR------- 49 usage_00108.pdb 54 VQALLDSLHETHD 66 usage_00269.pdb ------------- usage_00360.pdb 51 FNEMLN------- 56 usage_00361.pdb 50 FNEMLN------- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################