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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:32:15 2021
# Report_file: c_1415_88.html
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#====================================
# Aligned_structures: 6
#   1: usage_00403.pdb
#   2: usage_01135.pdb
#   3: usage_01136.pdb
#   4: usage_01137.pdb
#   5: usage_01138.pdb
#   6: usage_01139.pdb
#
# Length:         65
# Identity:        3/ 65 (  4.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     25/ 65 ( 38.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           40/ 65 ( 61.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00403.pdb         1  -----------------RAFYEHCNSIGLFATQPGASPDGSTE----PPSYLIPHFTAVV   39
usage_01135.pdb         1  DYFAPGYGVPNDAGMEAVKLLASLEG-----------------VLLDP-VYTGKAMAGLI   42
usage_01136.pdb         1  DYFAPGYGVPNDAGMEAVKLLASLEG-----------------VLLDP-VYTGKAMAGLI   42
usage_01137.pdb         1  DYFAPGYGVPNDAGMEAVKLLASLEG-----------------VLLDP-VYTGKAMAGLI   42
usage_01138.pdb         1  DYFAPGYGVPNDAGMEAVKLLASLEG-----------------VLLDP-VYTGKAMAGLI   42
usage_01139.pdb         1  DYFAPGYGVPNDAGMEAVKLLASLEG-----------------VLLDP-VYTGKAMAGLI   42
                                            vkllasleg                     P vYtgkamagli

usage_00403.pdb        40  DVML-   43
usage_01135.pdb        43  DGIS-   46
usage_01136.pdb        43  DGIS-   46
usage_01137.pdb        43  DGIS-   46
usage_01138.pdb        43  DGISQ   47
usage_01139.pdb        43  DGISQ   47
                           Dgis 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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