################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:38 2021 # Report_file: c_0762_51.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00200.pdb # 2: usage_00201.pdb # 3: usage_00239.pdb # 4: usage_00411.pdb # # Length: 75 # Identity: 16/ 75 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 75 ( 52.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 75 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00200.pdb 1 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------APKGLFGVECDVTDS 54 usage_00201.pdb 1 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------APKGLFGVEVDVTDS 54 usage_00239.pdb 1 --MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE------PPEGFLAVKCDITDT 52 usage_00411.pdb 1 ----KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-VERLKALNLPNTLCAQVDVTDK 55 rsVlvTGgnrGIGlAIA r a Ghkva t R p g v DvTD usage_00200.pdb 55 DAVDRAFTAVEEH-- 67 usage_00201.pdb 55 DAVDRAFTAVEEH-- 67 usage_00239.pdb 53 EQVEQAYKEIEETH- 66 usage_00411.pdb 56 YTFDTAITRAEKIYG 70 vd A t Ee #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################