################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:59 2021 # Report_file: c_1125_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00117.pdb # 2: usage_00415.pdb # 3: usage_00467.pdb # 4: usage_00496.pdb # 5: usage_00497.pdb # 6: usage_00498.pdb # 7: usage_00499.pdb # # Length: 115 # Identity: 21/115 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/115 ( 82.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/115 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 DAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 58 usage_00415.pdb 1 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 60 usage_00467.pdb 1 -AKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 57 usage_00496.pdb 1 DAKKLNELIEKENE-LAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 57 usage_00497.pdb 1 -AKKLNELIEKENE-LAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 56 usage_00498.pdb 1 DAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 58 usage_00499.pdb 1 -AKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTK 57 akklneliekene laqDKlvaEteDrkNtLEeYiYtLrgklee eyapfaSdaeKtk usage_00117.pdb 59 LQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKK----- 108 usage_00415.pdb 61 MEKAVEEKIEWLES-HQDADIEDFKAKKKELEEIVQPIISK-------------- 100 usage_00467.pdb 58 LQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEE------- 105 usage_00496.pdb 58 LQG-LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIR- 110 usage_00497.pdb 57 LQG-LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRS 110 usage_00498.pdb 59 LQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIR- 112 usage_00499.pdb 58 LQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRS 112 lqg lnkaeEWLyd gfDsikakyiAKyeELaslgniIrgr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################