################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:20 2021 # Report_file: c_1380_107.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00078.pdb # 2: usage_00633.pdb # 3: usage_00634.pdb # 4: usage_01000.pdb # 5: usage_01247.pdb # 6: usage_01884.pdb # 7: usage_01885.pdb # 8: usage_01936.pdb # 9: usage_02001.pdb # 10: usage_02002.pdb # # Length: 42 # Identity: 3/ 42 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 42 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 42 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 --CASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 33 usage_00633.pdb 1 --CASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 33 usage_00634.pdb 1 --CASINRIYGFYDECKRRY-----NIKL-WKTFTDCFN--- 31 usage_01000.pdb 1 VNAVSKIAA-NAVNGIVTFTHEQNINERIKLNKFSQIFLNGL 41 usage_01247.pdb 1 --CASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 33 usage_01884.pdb 1 ---ASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 32 usage_01885.pdb 1 ---ASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 32 usage_01936.pdb 1 --CASINRIYGFYDECKRRY-----NIKL-WKTFTDCFNCL- 33 usage_02001.pdb 1 --CANVTRVYGFYDECKRRC-----NIKT-WKLFIDTFN--- 31 usage_02002.pdb 1 --CANVTRVYGFYDECKRRC-----NIKT-WKLFIDTFN--- 31 a r gfydeckrr Nik wk F d Fn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################