################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:45:15 2021 # Report_file: c_0405_10.html ################################################################################################ #==================================== # Aligned_structures: 41 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00014.pdb # 11: usage_00023.pdb # 12: usage_00042.pdb # 13: usage_00043.pdb # 14: usage_00076.pdb # 15: usage_00080.pdb # 16: usage_00084.pdb # 17: usage_00139.pdb # 18: usage_00140.pdb # 19: usage_00141.pdb # 20: usage_00181.pdb # 21: usage_00203.pdb # 22: usage_00204.pdb # 23: usage_00206.pdb # 24: usage_00273.pdb # 25: usage_00299.pdb # 26: usage_00383.pdb # 27: usage_00384.pdb # 28: usage_00391.pdb # 29: usage_00392.pdb # 30: usage_00424.pdb # 31: usage_00437.pdb # 32: usage_00441.pdb # 33: usage_00472.pdb # 34: usage_00494.pdb # 35: usage_00499.pdb # 36: usage_00510.pdb # 37: usage_00531.pdb # 38: usage_00536.pdb # 39: usage_00546.pdb # 40: usage_00547.pdb # 41: usage_00548.pdb # # Length: 86 # Identity: 11/ 86 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 86 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 86 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 55 usage_00006.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 55 usage_00007.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 55 usage_00008.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 55 usage_00009.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 54 usage_00010.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 54 usage_00011.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 55 usage_00012.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 54 usage_00013.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPSSTW 54 usage_00014.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGAL-S--SGVHTFPAVLQ-SGLYTLTSSVTVPS--- 52 usage_00023.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 55 usage_00042.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSSW 54 usage_00043.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSPR 55 usage_00076.pdb 1 -SVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 54 usage_00080.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSPR 55 usage_00084.pdb 1 -SVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 54 usage_00139.pdb 1 -SVTLGCLVKGYFPEPV-TVKWNYGAL-S--SGVRTVSSVLQ-SGFYSLSSLVTVPSSTW 54 usage_00140.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-A--AGVHTFPAVLQ-AALYTLSSSVTVPSSSW 54 usage_00141.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-A--AGVHTFPAVLQ-AALYTLSSSVTVPSSSW 54 usage_00181.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSSW 54 usage_00203.pdb 1 -SVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 54 usage_00204.pdb 1 -SVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 54 usage_00206.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-A--AGVHTFPAVLQ-AALYTLSSSVTVPSSSW 54 usage_00273.pdb 1 -PVIIGCLIHDYFPSGTMNVTWG---KSGKDITTVNFPPALASGGRYTMSNQLTLPAVEC 56 usage_00299.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 54 usage_00383.pdb 1 STVTLGCLVKGYLPEPV-TVTWNSGTL-T--NGVRTFPSVRQSSGLYSLSSVVSVTS-S- 54 usage_00384.pdb 1 STVTLGCLVKGYLPEPV-TVTWNSGTL-T--NGVRTFPSVRQSSGLYSLSSVVSVTS-S- 54 usage_00391.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 54 usage_00392.pdb 1 SSVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 55 usage_00424.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 54 usage_00437.pdb 1 SSVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 55 usage_00441.pdb 1 SMVTLGCLVNGYFPEPV-TVTWNAGSL-G--SGVHTFPAVLQ-SDLYTLSSSVTVPVSTW 55 usage_00472.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-A--AGVHTFPAVLQ-AALYTLSSSVTVPSSSW 54 usage_00494.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 55 usage_00499.pdb 1 --VTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 53 usage_00510.pdb 1 SSVTLGCLVKGYFPEPV-TLTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 55 usage_00531.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSPR 54 usage_00536.pdb 1 SMVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSPR 55 usage_00546.pdb 1 SSVTLGCLVKGYFPESV-TLLWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVTSSTW 55 usage_00547.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 54 usage_00548.pdb 1 -MVTLGCLVKGYFPEPV-TVTWNSGSL-S--SGVHTFPAVLQ-SDLYTLSSSVTVPSSTW 54 VtlGCLv gY Pe v t Wn l gv tfp v q Y l s v v usage_00005.pdb 56 P-SQTVTCNVAHPASSTKVDKKIVP- 79 usage_00006.pdb 56 P-SQTVTCNVAHPASSTKVDKKIVP- 79 usage_00007.pdb 56 P-SQTVTCNVAHPASSTKVDKKIVP- 79 usage_00008.pdb 56 P-SQTVTCNVAHPASSTKVDKKIVP- 79 usage_00009.pdb 55 P-SQTVTCNVAHPASSTKVDKKIVP- 78 usage_00010.pdb 55 P-SQTVTCNVAHPASSTKVDKKIVP- 78 usage_00011.pdb 56 P-SQTVTCNVAHPASSTKVDKKIVP- 79 usage_00012.pdb 55 P-SQTVTCNVAHPASSTKVDKKIVP- 78 usage_00013.pdb 55 P-SQTVTCNVAHPASSTKVDKKIVP- 78 usage_00014.pdb 53 ----TVTCNVAHPASSTKVDKKIV-- 72 usage_00023.pdb 56 P-SETVTCNVAHPASSTKVDK----- 75 usage_00042.pdb 55 P-SETVTCNVAHPASSTKVDKK---- 75 usage_00043.pdb 56 P-SETVTCNVAHPASSTKVDKKIVP- 79 usage_00076.pdb 55 P-SQSITCNVAHPASSTKVDKKIEP- 78 usage_00080.pdb 56 P-SETVTCNVAHPASSTKVDKKIVP- 79 usage_00084.pdb 55 P-SQSITCNVAHPASSTKVDK----- 74 usage_00139.pdb 55 P-SQTVICNVAHPASKTELIKR---- 75 usage_00140.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00141.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00181.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00203.pdb 55 P-SQSITCNVAHPASSTKVD------ 73 usage_00204.pdb 55 P-SQSITCNVAHPASSTKVD------ 73 usage_00206.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00273.pdb 57 PEGESVKCSVQHD-SNPVQELDVNC- 80 usage_00299.pdb 55 P-SETVTCNVAHPASSTKVDKK---- 75 usage_00383.pdb 55 --SQPVTCNVAHPATNTKVDKTVA-- 76 usage_00384.pdb 55 --SQPVTCNVAHPATNTKVDKTVAP- 77 usage_00391.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00392.pdb 56 P-SQSITCNVAHPASSTKVDKKIEP- 79 usage_00424.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00437.pdb 56 P-SQSITCNVAHPASSTKVDKKIEP- 79 usage_00441.pdb 56 P-SEAVTCNVAHPASATSVDKAISP- 79 usage_00472.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00494.pdb 56 P-SETVTCNVAHPASSTKVDKKIVP- 79 usage_00499.pdb 54 P-SQSITCNVAHPASSTKVDKKIEP- 77 usage_00510.pdb 56 P-SQSVTCNVAHPASSTKVDKKIVP- 79 usage_00531.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00536.pdb 56 P-SETVTCNVAHPASSTKVDKKIVP- 79 usage_00546.pdb 56 P-SQSITCNVAHPASSTKVDKKIVPR 80 usage_00547.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 usage_00548.pdb 55 P-SETVTCNVAHPASSTKVDKKIVP- 78 CnVaHp t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################