################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:12 2021 # Report_file: c_0168_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00179.pdb # 3: usage_00206.pdb # 4: usage_00207.pdb # 5: usage_00208.pdb # 6: usage_00209.pdb # 7: usage_00210.pdb # 8: usage_00211.pdb # 9: usage_00212.pdb # 10: usage_00213.pdb # 11: usage_00232.pdb # # Length: 180 # Identity: 49/180 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 146/180 ( 81.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/180 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 DAII-SSNLTAGFFPMGAVILGPDLAKRVEAAVE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00179.pdb 1 DAIISSKNLTAGFFPMGAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 57 usage_00206.pdb 1 DAIISSKNLTAGFFP-GAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00207.pdb 1 DAIISSKNLTAGFFP-GAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00208.pdb 1 DAIISSKNLTAGFFP-GAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00209.pdb 1 DAIISSKNLTAGFFP-GAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00210.pdb 1 DAII-SSNLTAGFFPMGAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00211.pdb 1 DAII-SSNLTAGFFPMGAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00212.pdb 1 DAII-SSNLTAGFFPMGAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00213.pdb 1 DAII-SSNLTAGFFPMGAVILGPELSKRLETAIE-AI--EEFPHGFTASGHPVGCAIALK 56 usage_00232.pdb 1 DIITFAKGVTSGYVPLGGLAISEAVLARIS---GENAKGSWFTNGYTYSNQPVACAAALA 57 DaIi s nlTaGffP Gavilgp l kR e e ai eeFphGfTaSghPVgCAiALk usage_00001.pdb 57 AIDVVMNEGLAENVRRLAPRFEAGLKRIADRPNIGEYRGIGFMWALEAVKDKPTKTPFDA 116 usage_00179.pdb 58 AIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDG 117 usage_00206.pdb 57 AIDVV-NEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGF-WALEAVKDKASKTPFDG 114 usage_00207.pdb 57 AIDVV-NEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGF-WALEAVKDKASKTPFDG 114 usage_00208.pdb 57 AIDVV-NEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGF-WALEAVKDKASKTPFDG 114 usage_00209.pdb 57 AIDVV-NEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGF-WALEAVKDKASKTPFDG 114 usage_00210.pdb 57 AIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDG 116 usage_00211.pdb 57 AIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDG 116 usage_00212.pdb 57 AIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDG 116 usage_00213.pdb 57 AIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDG 116 usage_00232.pdb 58 NIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLD------GTA 111 aIdvv nEGlaenvRrlAprFe Lk ia rPnigEyRgiGf waleavkD fd usage_00001.pdb 117 NL-SVSERIANTCTDLGLICRPLGQSIVLCPPFILTEAQMDEMFEKLEKALDKVFAEV-- 173 usage_00179.pdb 118 NL-SVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEVAA 176 usage_00206.pdb 115 NL-SVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQ-DE-FDKLEKALDKVFAE--- 168 usage_00207.pdb 115 NL-SVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQ-DE-FDKLEKALDKVFAEVA- 170 usage_00208.pdb 115 NL-SVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQ-DE-FDKLEKALDKVFAEV-- 169 usage_00209.pdb 115 NL-SVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQ-DE-FDKLEKALDKVFAEVA- 170 usage_00210.pdb 117 NL-SVSERIANTCTDLGLICFPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV-- 173 usage_00211.pdb 117 NL-SVSERIANTCTDLGLICFPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV-- 173 usage_00212.pdb 117 NL-SVSERIANTCTDLGLICFPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV-- 173 usage_00213.pdb 117 NL-SVSERIANTCTDLGLICFPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV-- 173 usage_00232.pdb 112 EDKAFTLKIDERCFELGLIVRPLGDLCVISPPLIISRAQIDEMVAIMRQAITEVSAAHG- 170 nl svserIantCtdLGLIc PLGqs VlcPPfIlteAQ DE f klekAldkVfAe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################