################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:00 2021 # Report_file: c_0398_58.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00127.pdb # 2: usage_00422.pdb # 3: usage_00492.pdb # 4: usage_00548.pdb # 5: usage_00577.pdb # 6: usage_00578.pdb # 7: usage_00766.pdb # # Length: 183 # Identity: 7/183 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/183 ( 20.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 115/183 ( 62.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00127.pdb 1 -----ETVEMSMPTVKN--TDDQVDIIYKIKERN-T-G---------SINFGVGY-GS-G 40 usage_00422.pdb 1 ------------------------------------------------MNFGIGY-GT-E 10 usage_00492.pdb 1 ----T--GS---------------------------------------FNFGIGY-GT-E 13 usage_00548.pdb 1 -------TGSFNFG----------------IS--FQAGVQQDNWLGTGYAVGING-TKN- 33 usage_00577.pdb 1 -------ETVDTDTQRVPGSP-DQVDVVY-KVKERNTG---------SFNFGIGY-GT-E 40 usage_00578.pdb 1 -------ETVDTDTQRVPGSP-DQVDVVY-KVKERNTG---------SFNFGIGY-GT-E 40 usage_00766.pdb 1 KERNT--GS---------------------------------------FNF-GIGYGT-E 17 nf g usage_00127.pdb 41 SGLSY--NAGITQDNFLGMGSSLGLNGSRNT-------------DSTNVNLSYTEPYFTK 85 usage_00422.pdb 11 SGVSF--QAGVQQDNWLGTGYAVGINGTKND-------------YQTYAELSVTNPYFTV 55 usage_00492.pdb 14 SGVSF--QAGVQQDNWLGTGYAVGINGTKND-------------YQTYAELSVTNPYFTV 58 usage_00548.pdb 34 D-YQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPI-N- 90 usage_00577.pdb 41 SGVSF--QAGVQQDNWLGTGYAVGINGTKND-------------YQTYAELSVTNPYFTV 85 usage_00578.pdb 41 SGVSF--QAGVQQDNWLGTGYAVGINGTKND-------------YQTYAELSVTNPYFTV 85 usage_00766.pdb 18 SGVSF--QAGVQQDNWLGTGYAVGINGTKND-------------YQTYAELSVTNPYFTV 62 s s agv qdn lg G G ng Nd t ls t Py t usage_00127.pdb 86 DGVSLGGNIFYEDYDN-SA--RK-ASAAYKRKTYGASGTLGFPV---------------- 125 usage_00422.pdb 56 DGVSLGGRLFYNDFQA-DD----ADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNS 110 usage_00492.pdb 59 DGVSLGGRLFYNDFQADDADL----SD-YTNKSYGTDVTLGFPINEYNSLRA-------- 105 usage_00548.pdb 91 EYNSLRAGLGYVHNSL-S-----------------N------------------------ 108 usage_00577.pdb 86 DGVSLGGRLFYNDFQA-DD----ADSSDYTNKSYGTDVTLGFPIN--------------- 125 usage_00578.pdb 86 DGVSLGGRLFYNDFQA-DD----ADSSDYTNKSYGTDVTLGFP----------------- 123 usage_00766.pdb 63 DGVSLGGRLFYNDFQADDADL----SD-YTNKSYGTDVTLGFPINEYNSLRAGLGYVHNS 117 dgvSLgg lfY d usage_00127.pdb --- usage_00422.pdb 111 LS- 112 usage_00492.pdb --- usage_00548.pdb --- usage_00577.pdb --- usage_00578.pdb --- usage_00766.pdb 118 LSN 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################