################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:52 2021 # Report_file: c_1172_389.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00895.pdb # 2: usage_00896.pdb # 3: usage_00897.pdb # 4: usage_02623.pdb # 5: usage_03008.pdb # 6: usage_03019.pdb # 7: usage_03167.pdb # 8: usage_03168.pdb # 9: usage_03169.pdb # # Length: 40 # Identity: 5/ 40 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 40 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 40 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00895.pdb 1 --MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 36 usage_00896.pdb 1 -AMKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 37 usage_00897.pdb 1 --MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 36 usage_02623.pdb 1 ATKLVVMTRG--H--NPVIAAEQTAD-GTVVVHE--VGVP 33 usage_03008.pdb 1 MPAKAVCVLRG-D-VSGTVFFDQQDEKSPVVVSGEVQG-- 36 usage_03019.pdb 1 MPAKAVCVLRG-D-VSGTVFFDQQDEKSPVVVSGEVQG-- 36 usage_03167.pdb 1 -AMKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 37 usage_03168.pdb 1 --MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 36 usage_03169.pdb 1 -AMKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITG-- 37 kaVcvl gt f Q pVV sg G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################