################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:15 2021 # Report_file: c_0679_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00204.pdb # 2: usage_00276.pdb # 3: usage_00408.pdb # 4: usage_00409.pdb # 5: usage_00484.pdb # 6: usage_00640.pdb # # Length: 72 # Identity: 5/ 72 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 72 ( 26.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 72 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 LFQTRVDMNPAG---------GMLVTPTIEIPAK--EV------S-TDNQYVVVQVTGPQ 42 usage_00276.pdb 1 ---EKTVLTPAT---------NHMGNVTFTIPANREFKS-EKG----RNKFVTVQATFGT 43 usage_00408.pdb 1 ----NVIYTFT-DYVNTKDDVKATLTMPAYIDPE--NV------KKT--GNVTLATGIGS 45 usage_00409.pdb 1 --SEKTVLTPAT---------NHMGNVTFTIP---------KG----RNKFVTVQATFGT 36 usage_00484.pdb 1 ----KTVLTPAT---------NHMGNVTFTIPANR--EFKSEKG---RNKFVTVQATFGT 42 usage_00640.pdb 1 LSSEKTVLTPAT---------NHMGNVTFTIPANREFKS-EKG----RNKFVTVQATFGT 46 tpa t Ip Vtvq t g usage_00204.pdb 43 VRLEKVVLLSY- 53 usage_00276.pdb 44 QVVEKVVLVSL- 54 usage_00408.pdb 46 TTANKTVLVDYE 57 usage_00409.pdb 37 QVVEKVVLVSL- 47 usage_00484.pdb 43 QVVEKVVLVSL- 53 usage_00640.pdb 47 QVVEKVVLVSL- 57 eKvVLvs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################