################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:46 2021 # Report_file: c_0769_47.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00007.pdb # 2: usage_00036.pdb # 3: usage_00337.pdb # 4: usage_00338.pdb # 5: usage_00626.pdb # # Length: 81 # Identity: 1/ 81 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 81 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 81 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 EYVFSTDM-------QESDIVFGGVNKLKDAIHEAYE-MFH-PAAIGVYATCPVGLIGD- 50 usage_00036.pdb 1 ------DF-------QEKDIVFGGDKKLAKLIDEVET-LFPLNKGISVQSECPIGLIGD- 45 usage_00337.pdb 1 ------DF-------QERDIVFGGDKKLSKLIEEMEL-LFPLTKGITIQSECPVGLIGD- 45 usage_00338.pdb 1 ------DF-------QERDIVFGGDKKLSKLIEEMEL-LFPLTKGITIQSECPVGLIGD- 45 usage_00626.pdb 1 --------KYLARPCDL-----NDSKMFSTLLNECQ-LYDPN-VVKVFVAEVSLAYMK-P 44 qe gg kkl li E fp i ecp glig usage_00007.pdb 51 DILAVAATASKEIGIPVHAFS 71 usage_00036.pdb 46 DIESVSKVKGAELSKTIVPVR 66 usage_00337.pdb 46 DISAVANASSKALDKPVIPVR 66 usage_00338.pdb 46 DISAVANASSKALDKPVIPVR 66 usage_00626.pdb 45 ERSDSIIEATSKME-NSHFII 64 di v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################