################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:01 2021 # Report_file: c_1010_51.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00135.pdb # 3: usage_00203.pdb # 4: usage_00204.pdb # 5: usage_00205.pdb # 6: usage_00286.pdb # 7: usage_00557.pdb # 8: usage_00558.pdb # 9: usage_00559.pdb # 10: usage_00593.pdb # 11: usage_00598.pdb # 12: usage_00717.pdb # 13: usage_00718.pdb # # Length: 53 # Identity: 11/ 53 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 53 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 53 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----RVGLIFGGKSAEHEVSLQSARNILDAL--DPQRFEPVLIGIDKQGQWHV 47 usage_00135.pdb 1 ---KRVALIFGGNSSEHDVSKRSAQNFYNAIEA-TGKYEIIVFAIAQNGFFLD 49 usage_00203.pdb 1 ----RVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 47 usage_00204.pdb 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 51 usage_00205.pdb 1 ----RVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 47 usage_00286.pdb 1 ----RVGLIFGGKSAEHEVSLQSARNILDAL--DPQRFEPVLIGIDKQGQWHV 47 usage_00557.pdb 1 -AKLRVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 50 usage_00558.pdb 1 ----RVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 47 usage_00559.pdb 1 ----RVGIVFGGKSAEHEVSLQSAKNIVDAI--DKTRFDVVLLGIDKAGQWHV 47 usage_00593.pdb 1 ----RVGLIFGGKSAEHEVSLQSARNILDAL--DPQRFEPVLIGIDKQGQWHV 47 usage_00598.pdb 1 ----RVGLIFGGKSAEHEVSLQSARNILDAL--DPQRFEPVLIGIDKQGQWHV 47 usage_00717.pdb 1 ---KKIAVIFGGNSTEYEVSLQSASAVFENI--NTNKFDIIPIGITRSGEWYH 48 usage_00718.pdb 1 ---KKIAVIFGGNSTEYEVSLQSASAVFENI--NTNKFDIIPIGITRSGEWYH 48 FGG S E eVSlqSA f gI G w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################