################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:24 2021 # Report_file: c_1487_195.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_01238.pdb # 2: usage_01423.pdb # 3: usage_01685.pdb # 4: usage_03681.pdb # 5: usage_03843.pdb # 6: usage_03844.pdb # 7: usage_03932.pdb # 8: usage_04563.pdb # 9: usage_05117.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 45 ( 8.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 45 ( 57.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01238.pdb 1 -LAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILG------ 38 usage_01423.pdb 1 -LWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL-- 42 usage_01685.pdb 1 ------SPMTQVAAVIVAAWRNRKLETLSTLTDVEEVKQIVRML- 38 usage_03681.pdb 1 -KTYWNLGYWLCYINSTVNPVCYALCNKTFRTTFKTLL------- 37 usage_03843.pdb 1 -------------------PFIYAYRIREFRQTFRKIIRSHVL-R 25 usage_03844.pdb 1 -------------------PFIYAYRIREFRQTFRKIIRS----- 21 usage_03932.pdb 1 PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV--- 42 usage_04563.pdb 1 -LAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILG------ 38 usage_05117.pdb 1 PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL-- 43 p y tf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################