################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:59 2021 # Report_file: c_1117_37.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00494.pdb # 2: usage_00495.pdb # 3: usage_00496.pdb # 4: usage_00497.pdb # 5: usage_00498.pdb # # Length: 70 # Identity: 60/ 70 ( 85.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 70 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 70 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00494.pdb 1 GLSQALAFVDSRGKEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE 60 usage_00495.pdb 1 GLSQALAFVDSRGKEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE 60 usage_00496.pdb 1 --SQALAFVDSG-KEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE 57 usage_00497.pdb 1 -LSQALAFVDSR-GEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE 58 usage_00498.pdb 1 GLSQALAFVDSR-KEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE 59 SQALAFVDSr kEAHKALGNDLAQVLGYRDLRELAEAAREAELLQYLRLTREVLAAAE usage_00494.pdb 61 WFKRFAQALI 70 usage_00495.pdb 61 WFKRF----- 65 usage_00496.pdb 58 WFKRFAQA-- 65 usage_00497.pdb 59 WFKRFAQALI 68 usage_00498.pdb 60 WFKRFAQA-- 67 WFKRF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################