################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:36 2021 # Report_file: c_1058_40.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00066.pdb # 2: usage_00099.pdb # 3: usage_00101.pdb # 4: usage_00326.pdb # 5: usage_00345.pdb # 6: usage_00356.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 51 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 51 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 ---VSYLSDMVKGL-G--KADEV-TIKFGNEMPMQMEYYIRDEGRLTFLLA 44 usage_00099.pdb 1 ---VSYLSDMVKGL-G--KADEV-TIKFGNEMPMQMEYYIRDEGRLTFLLA 44 usage_00101.pdb 1 --SAEMFKDAVKGLRG--FSAPT-MVSFGENLPMKIDVEAVSGGHMIFWIA 46 usage_00326.pdb 1 S---AEFKDAVKGL-RGF---SAPTVSFGENL-PKIDVEAVSGGHI-FWIA 42 usage_00345.pdb 1 -DFGAALAWYRSLLG-----AEP--TFYPHE--TEAVWQLEEGRLLYIVE- 40 usage_00356.pdb 1 ---VAYLEDILRSL-A--DADEV-IIRFGFDIPLLLKYMVRDAGEVSFLIA 44 d L fg g f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################