################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:34 2021 # Report_file: c_1489_189.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00394.pdb # 2: usage_00395.pdb # 3: usage_00969.pdb # 4: usage_01003.pdb # 5: usage_01095.pdb # 6: usage_01149.pdb # 7: usage_01348.pdb # 8: usage_01349.pdb # 9: usage_01717.pdb # 10: usage_01982.pdb # 11: usage_02373.pdb # 12: usage_02675.pdb # 13: usage_02715.pdb # 14: usage_02716.pdb # 15: usage_02891.pdb # 16: usage_03200.pdb # 17: usage_03896.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 44 ( 2.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 44 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00394.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_00395.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_00969.pdb 1 ------LKDKILGVAKELFIKNGYNAT-----TTGEIVKLSE-- 31 usage_01003.pdb 1 ---QSETVERILDAAEQLFAEKGFAET-----SLRLITSKAG-- 34 usage_01095.pdb 1 ----IETQKAILSASYELLLESGFKAV-----TVDKIAER---- 31 usage_01149.pdb 1 -----DSREKILHTASRLSQLQGYHAT-----GLNQIVKE---- 30 usage_01348.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_01349.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKA--- 31 usage_01717.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKA--- 31 usage_01982.pdb 1 ---REQTMENILKAAKKKFGERGYEGT-----SIQEIAKEAK-- 34 usage_02373.pdb 1 ------MKDKIIDNAITLFSEKGYDGT-----TLDDISKSV--- 30 usage_02675.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_02715.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_02716.pdb 1 -----SKRDAILKAAVEVFGKKGYDRA-----TTDEIAEKAG-- 32 usage_02891.pdb 1 SEAQRERRKRILDATMAIASKGGYEAV-----QMRAVADRAD-- 37 usage_03200.pdb 1 -------AKLSAIKF-VL---KDPLTGDYLVDEKEIEEIVKKTG 33 usage_03896.pdb 1 ------TREHLLATGEQLSLQRGFTGM-----GLSELLKTAE-- 31 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################