################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:12 2021 # Report_file: c_0171_12.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00073.pdb # 2: usage_00074.pdb # 3: usage_00075.pdb # 4: usage_00076.pdb # 5: usage_00167.pdb # 6: usage_00169.pdb # 7: usage_00278.pdb # 8: usage_00290.pdb # # Length: 191 # Identity: 37/191 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/191 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/191 ( 27.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 --VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWD 57 usage_00074.pdb 1 --VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWD 57 usage_00075.pdb 1 --VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWD 57 usage_00076.pdb 1 --VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWD 57 usage_00167.pdb 1 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWD 59 usage_00169.pdb 1 -----KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEV------VATMQVWD 49 usage_00278.pdb 1 -KVLLKVIILGDSGVGKTSLMNQYVNKKFS--------ADFLTKEVMVDD-RLVTMQIWD 50 usage_00290.pdb 1 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 60 KViilGdsGVGKTSlm YVn kfS aDFltKev lvtmQ WD usage_00073.pdb 58 T--AGLERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 112 usage_00074.pdb 58 T--AGLERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 112 usage_00075.pdb 58 T--AGLERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 112 usage_00076.pdb 58 T--AGLERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 112 usage_00167.pdb 60 T--AGLERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 114 usage_00169.pdb 50 T--AGQERFQSLGV-AFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPE--TF 104 usage_00278.pdb 51 TSL---------GV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE--NF 98 usage_00290.pdb 61 I--AGLE--RFGNTRVYYKE-AGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN--GSPI 113 t gv afYrg dccvlVfDvt tF sWrdefl a f usage_00073.pdb 113 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 usage_00074.pdb 113 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 usage_00075.pdb 113 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 usage_00076.pdb 113 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 usage_00167.pdb 115 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 170 usage_00169.pdb 105 PFVILGNKIDAEESKKIVSEKS--AQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 162 usage_00278.pdb 99 PFVVLGNKIDLE--NRQVATKR--AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 154 usage_00290.pdb 114 PAVLLANKCDQN--K-DSSS--PSQDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKLV 168 PfV LgNKiD e v aq c s ip FeTSAK aINve Af iar al usage_00073.pdb 169 KQETEVEL--- 176 usage_00074.pdb 169 KQETEVEL--- 176 usage_00075.pdb 169 KQETEVEL--- 176 usage_00076.pdb 169 KQETEVEL--- 176 usage_00167.pdb 171 KQE-------- 173 usage_00169.pdb 163 QQNQA------ 167 usage_00278.pdb 155 KQETEVELYN- 164 usage_00290.pdb 169 N-HQS-----F 173 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################