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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:07:51 2021
# Report_file: c_1121_53.html
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#====================================
# Aligned_structures: 4
#   1: usage_00066.pdb
#   2: usage_00113.pdb
#   3: usage_00269.pdb
#   4: usage_00324.pdb
#
# Length:        117
# Identity:       21/117 ( 17.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     88/117 ( 75.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/117 ( 24.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00066.pdb         1  ----------TTPLLLLDLALLVD-----ADQGTILALVGADGIMIGTGLVGALT-KVYS   44
usage_00113.pdb         1  TVFRYINWLLTVPLQVVEFYLILAACTSV-AASLFKKLLAGSLV-LGAGFAGEAGLA---   55
usage_00269.pdb         1  ----------TTPLLLLDLALLVD-----ADQGTILALVGADGIMIGTGLVGALT-KVYS   44
usage_00324.pdb         1  ----------TTPLLLLDLALLVD-----ADQGTILALVGADGIMIGTGLVGALT-KVYS   44
                                     TtPLllldlaLlvd      dqgtilaLvgadgi iGtGlvGalt k   

usage_00066.pdb        45  YRFVWWAISTAAMLYILYVLFFGF-SMRPEVASTFKVLRNVT-VVLWSAYPVVWLIG   99
usage_00113.pdb        56  PVLPAFIIGA-GWL-YIYELYGEGKTASPAVNSAYNA----IIVVGWAIYPAGYAAG  106
usage_00269.pdb        45  YRFVWWAISTAAMLYILYVLFFGF-SMRPEVASTFKVLRNVT-VVLWSAYPVVWLIG   99
usage_00324.pdb        45  YRFVWWAISTAAMLYILYVLFFGF-SMRPEVASTFKVLRNVT-VVLWSAYPVVWLIG   99
                           yrfvwwaIst amL ilYvLffgf smrPeVaStfkv    t VVlWsaYPvvwliG


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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