################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:33 2021 # Report_file: c_0069_19.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00054.pdb # 2: usage_00164.pdb # 3: usage_00165.pdb # 4: usage_00166.pdb # # Length: 243 # Identity: 72/243 ( 29.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 205/243 ( 84.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/243 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 KTAIVTGGRGDIGRACVLELAARGANVAINY-ASSEGADSAVAEIKAAGGNAFALQGD-T 58 usage_00164.pdb 1 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 60 usage_00165.pdb 1 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 60 usage_00166.pdb 1 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 60 KvAIVTGasrgIGaAiaarLAsdGftVvINY gkaaaAeevagkIeAAGGkAltaQaD s usage_00054.pdb 59 KEADVAALVEKTVKEFGQVDTLVHVTGGLIARVTSE-------TLDHWQSV-DVNLTSFV 110 usage_00164.pdb 61 DPAAVRRLFATAEEAFGGVDVLVNNAGIP-------LTTIAETGDAVFDRVIAVNLKGTF 113 usage_00165.pdb 61 DPAAVRRLFATAEEAFGGVDVLVNNAGIP-------LTTIAETGDAVFDRVIAVNLKGTF 113 usage_00166.pdb 61 DPAAVRRLFATAEEAFGGVDVLVNNAGIP-------LTTIAETGDAVFDRVIAVNLKGTF 113 dpAaVrrLfataeeaFGgVDvLVnnaGip gdavfdrV aVNLkgtf usage_00054.pdb 111 LV-RECLP-HTEGSSIVGLASQAGRDG-GGPGASAYGASKGALTLTRGLAKELGPK-IRV 166 usage_00164.pdb 114 NTLREAAQRLRVGGRIIN-STSQV-G-LLHPSYGIYAAAKAGVEATHVLSKELRGRDITV 170 usage_00165.pdb 114 NTLREAAQRLRVGGRIIN-STSQV-G-LLHPSYGIYAAAKAGVEATHVLSKELRGRDITV 170 usage_00166.pdb 114 NTLREAAQRLRVGGRIIN-STSQV-G-LLHPSYGIYAAAKAGVEATHVLSKELRGRDITV 170 nt REaaq lrvGgrIin stsqv g lhPsygiYaAaKagveaThvLsKELrgr ItV usage_00054.pdb 167 NSLCPGIDTDFHN--------RTHVANVSPVKREGTSEDVAKLAVFLASDDAAFITGANV 218 usage_00164.pdb 171 NAVAPGP------TA-----VRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVL 219 usage_00165.pdb 171 NAVAPGP--------TATDLVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVL 222 usage_00166.pdb 171 NAVAPGP------T------VRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVL 218 NavaPGp RdrfAklaPleRlGTpqDiAgavaFLAgpDgAwvnGqvl usage_00054.pdb 219 DIN 221 usage_00164.pdb 220 RAN 222 usage_00165.pdb 223 RAN 225 usage_00166.pdb 219 RAN 221 raN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################