################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:06 2021 # Report_file: c_0689_14.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00016.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00089.pdb # 9: usage_00098.pdb # # Length: 67 # Identity: 2/ 67 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 67 ( 10.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 67 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 KVIIFMGLTDP-NAH-R-Y-A-RHSMVLVPMDTPGITVERMLPTMGFY-DE-PGGHGVVS 53 usage_00016.pdb 1 DLVALMCKTDP-DAQPA-H-K-GVSILLVE-KVPGFDVSRDLPKL---GY-KGVESCELN 51 usage_00054.pdb 1 DLLFVFGVVQ-DD---S-PQQGAIIAAAIPTSRAGVTPNDDWAAI---GM-RQTDSGSTD 51 usage_00055.pdb 1 GVAIVFAMTDP-EA--G-K-R-GISAFLVPTDTPGFIVGKPEKKM---GI-RASDTCPIT 50 usage_00086.pdb 1 NVVIVFAVTDP-AA--G-K-K-GISAFIVPTDTPGYEVMSVEHKL---GQ-HSSDTCALG 50 usage_00087.pdb 1 NVVIVFAVTDP-AA--G-K-K-GISAFIVPTDTPGYEVMSVEHKL---GQ-HSSDTCALG 50 usage_00088.pdb 1 NVVIVFAVTDP-AA--G-K-K-GISAFIVPTDTPGYEVMSVEHKL---GQ-HSSDTCALG 50 usage_00089.pdb 1 NVVIVFAVTDP-AA--G-K-K-GISAFIVPTDTPGYEVMSVEHKL---GQ-HSSDTCALG 50 usage_00098.pdb 1 DFVTTAVRTG--G---PGY-G-GVSLLVIDKNSPGFEVSRRLDKM---GW-RCSDTAELS 49 t s pG v usage_00006.pdb 54 FDNVRLP 60 usage_00016.pdb 52 FTDARVP 58 usage_00054.pdb 52 FHNVKVE 58 usage_00055.pdb 51 FENCAIP 57 usage_00086.pdb 51 FTNMRVP 57 usage_00087.pdb 51 FTNMRVP 57 usage_00088.pdb 51 FTNMRVP 57 usage_00089.pdb 51 FTNMRVP 57 usage_00098.pdb 50 FVDVRVP 56 F p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################