################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:31 2021 # Report_file: c_1486_63.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00113.pdb # 2: usage_00186.pdb # 3: usage_01113.pdb # 4: usage_01114.pdb # 5: usage_01297.pdb # 6: usage_01605.pdb # 7: usage_01610.pdb # 8: usage_01611.pdb # 9: usage_02075.pdb # 10: usage_02076.pdb # 11: usage_02154.pdb # 12: usage_02257.pdb # 13: usage_02258.pdb # 14: usage_02259.pdb # # Length: 42 # Identity: 11/ 42 ( 26.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 42 ( 69.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 42 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 -LKTAVQMAVFIHNKK-RKG----GYSAGERIVDIIATDIQT 36 usage_00186.pdb 1 SVETIVLMAVHCMNHK-RRGGIG-DMTPAERLINMITTEQE- 39 usage_01113.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 usage_01114.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 usage_01297.pdb 1 -LKTAVQMAVFIHNHK-RKG---GGYSAGERIVDIIATDIQT 37 usage_01605.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 usage_01610.pdb 1 -LKTAVQMAVFIHNHK-RK------YSAGERIVDIIATDIQ- 33 usage_01611.pdb 1 -LKTAVQMAVFIHNHK-RK------YSAGERIVDIIATDIQ- 33 usage_02075.pdb 1 HLKTAVQMAVFIHNHK-RKGGI-GGYSAGERIVDIIATDI-- 38 usage_02076.pdb 1 HLKTAVQMAVFIHNHKRKG-----GYSAGERIVDIIATDIQT 37 usage_02154.pdb 1 -LKTAVQMAVFIHNKKRKGG-I-GGYSAGERIVDIIATDIQ- 38 usage_02257.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 usage_02258.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 usage_02259.pdb 1 -LKTAVQMAVFIHNHK-RK-----GYSAGERIVDIIATDIQ- 34 lkTaVqMAVfihN K ysagERivdiIaTdi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################