################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:06 2021 # Report_file: c_1197_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00214.pdb # 2: usage_00304.pdb # 3: usage_00305.pdb # 4: usage_00306.pdb # 5: usage_00307.pdb # 6: usage_00308.pdb # 7: usage_00711.pdb # 8: usage_01205.pdb # 9: usage_01254.pdb # 10: usage_01255.pdb # 11: usage_01256.pdb # 12: usage_01257.pdb # 13: usage_01258.pdb # # Length: 47 # Identity: 4/ 47 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 47 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 47 ( 38.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00214.pdb 1 DGWLICEEPTCRNRTRH-LPLQF--SR---TGPLCPACMKATLQP-- 39 usage_00304.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_00305.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_00306.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_00307.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_00308.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_00711.pdb 1 KVELECKD--CSHVFKP---------NALDY-GVCEKCHSKNVIITQ 35 usage_01205.pdb 1 -LKKVCRK--CGALNPI---------R---A-TKCRRCHSTNLRLK- 30 usage_01254.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_01255.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_01256.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_01257.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 usage_01258.pdb 1 VAVFVCKD--CGHEMIVPQKPYESLEK---V-KKCEQCGSKNIEL-- 39 C C C C s n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################