################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:52 2021 # Report_file: c_0834_74.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00233.pdb # 2: usage_00234.pdb # 3: usage_00827.pdb # 4: usage_01020.pdb # # Length: 94 # Identity: 20/ 94 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 94 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 94 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 ------------EPIVEMLREK-GDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYT 47 usage_00234.pdb 1 DEKGWEAVKEYAEPIVEMLREK-GDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYT 59 usage_00827.pdb 1 --------KPYAEGVITKIRVYDTTNIIVVGTRQWSQLVTEAAANPITRQNIMYTLHFYP 52 usage_01020.pdb 1 ------------EPIIKMLRDMGNENIIIVGNPEWSTRPDLAVNDPIDDKNVMYSAHFYT 48 Epi mlR N I VGnp WSqrpdl a nPId NiMYs HFYt usage_00233.pdb 48 GSHGASHIGYPEGTPSSERS-NVMANVRYALDNG 80 usage_00234.pdb 60 GSHGASHIGYPEGTPSSERS-NVMANVRYALDNG 92 usage_00827.pdb 53 GTHK----------------QELRNEAQKALDMG 70 usage_01020.pdb 49 GSASVW----ENGN-----KGHIARNIEKALENG 73 Gsh n ALdnG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################