################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:11 2021 # Report_file: c_1371_89.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00351.pdb # 2: usage_00352.pdb # 3: usage_00760.pdb # 4: usage_00761.pdb # 5: usage_00762.pdb # 6: usage_00919.pdb # 7: usage_01167.pdb # 8: usage_01168.pdb # 9: usage_01169.pdb # 10: usage_01170.pdb # 11: usage_01171.pdb # 12: usage_01172.pdb # 13: usage_01709.pdb # # Length: 44 # Identity: 3/ 44 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 44 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 44 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00351.pdb 1 DYEKGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQLLTKL- 41 usage_00352.pdb 1 ---KGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQLLTKL- 38 usage_00760.pdb 1 --EKGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 40 usage_00761.pdb 1 -YEKGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 41 usage_00762.pdb 1 --EKGVDHLTNAIAV-S-GQPQQLLQVLQQTLPPPVFQMLLTKL 40 usage_00919.pdb 1 -----SQLAWDTCSGGTGNCGTVCCGQ---CFSFPVSQSCAGMA 36 usage_01167.pdb 1 ---KGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 39 usage_01168.pdb 1 ---KGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 39 usage_01169.pdb 1 --EKGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 40 usage_01170.pdb 1 ---KGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLT-- 37 usage_01171.pdb 1 -YEKGVDHLTNAIAV-S-GQPQQLLQVLQQTLPPPVFQMLLTKL 41 usage_01172.pdb 1 -YEKGVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLT-- 39 usage_01709.pdb 1 ----GVDHLTNAIAV-C-GQPQQLLQVLQQTLPPPVFQMLLTKL 38 vdhltnaiav gqpqqllqv tlppPVfQ l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################