################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:31 2021 # Report_file: c_1263_69.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00411.pdb # 2: usage_00724.pdb # 3: usage_00725.pdb # 4: usage_00765.pdb # 5: usage_00810.pdb # # Length: 53 # Identity: 2/ 53 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 53 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 53 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00411.pdb 1 AIKELREA----TSPKAN---KEILDEA---YVMASVDNPHVCRLLGICLT-- 41 usage_00724.pdb 1 VVKFIKKEKV-IEDPKLGKV----TLEI---AILSRVEHANIIKVLDIFEN-Q 44 usage_00725.pdb 1 VVKFIKKEKVWIEDPKLGKV----TLEI---AILSRVEHANIIKVLDIFEN-Q 45 usage_00765.pdb 1 AIKKVIQD------PRFR------NRELQIMQDLAVLHHPNIVQLQSYFYTL- 40 usage_00810.pdb 1 AIKKLSR------PFQNQTHAKRAYREL---VLMKCVNHKNIIGLLNVFTP-Q 43 K p E v h ni l f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################