################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:39 2021 # Report_file: c_1296_25.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00418.pdb # 2: usage_00419.pdb # 3: usage_00420.pdb # 4: usage_00421.pdb # 5: usage_00461.pdb # 6: usage_00840.pdb # 7: usage_01045.pdb # 8: usage_01395.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 41 ( 43.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00418.pdb 1 SKTSIGHVVQLLYRASCFKVTK-R-DE------DSSLMQL- 32 usage_00419.pdb 1 SKTSIGHVVQLLYRASCFKVTK-R-DE------DSSLMQL- 32 usage_00420.pdb 1 SKTSIGHVVQLLYRASCFKVTK-R-DE------DSSLMQL- 32 usage_00421.pdb 1 SKTSIGHVVQLLYRASCFKVTK-R-DE------DSSLMQL- 32 usage_00461.pdb 1 TKTTVGEIAKIFLEKGIVVEEK-DSP-RPTKSL-------- 31 usage_00840.pdb 1 SKTSIGHVVQLLYRASCFKVTK-R-DE------DSSLMQL- 32 usage_01045.pdb 1 PVESIQIVLEELRKKGNLEWLDKS---------KSSFLIMW 32 usage_01395.pdb 1 NTKTVQSVVKILAQRQMIVREA-D---------QKIVGAL- 30 v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################