################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:51 2021 # Report_file: c_1109_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00091.pdb # 4: usage_00092.pdb # 5: usage_00328.pdb # 6: usage_00329.pdb # # Length: 91 # Identity: 71/ 91 ( 78.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 91 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 91 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 -PAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--LDLKVSIHQMEME 55 usage_00044.pdb 1 TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--LDLKVSIHQMEME 56 usage_00091.pdb 1 TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--EDLKVSIHQMEME 56 usage_00092.pdb 1 TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--EDLKVSIHQMEME 56 usage_00328.pdb 1 -PAELIERLEQAW-NEKFAPELLESKPEIVECVE---QLEHEENLR-EDLKVSIHQ-E-E 52 usage_00329.pdb 1 TPAELIERLEQAW-NEKFAPELLESKPEIVECVEQLEHEENLRRAKREDLKVSIHQ-E-E 57 PAELIERLEQAW NEKFAPELLESKPEIVECV qlEh e DLKVSIHQ E E usage_00043.pdb 56 RIRYVLSSYLRCRLMKIEKFFPHVLEKEKT- 85 usage_00044.pdb 57 RIRYVLSSYLRCRLMKIEKFFPHVLEKEKTR 87 usage_00091.pdb 57 RIRYVLSSYLRCRLMKIEKFFPHVLEKEKTR 87 usage_00092.pdb 57 RIRYVLSSYLRCRLMKIEKFFPHVLEKEKT- 86 usage_00328.pdb 53 RIRYVLSSYLRCRL-KIEKFFPHVLEKEKTR 82 usage_00329.pdb 58 RIRYVLSSYLRCRL-KIEKFFPHVLEKEKTR 87 RIRYVLSSYLRCRL KIEKFFPHVLEKEKT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################