################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:23 2021 # Report_file: c_1425_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00068.pdb # 2: usage_00100.pdb # 3: usage_00101.pdb # 4: usage_00188.pdb # 5: usage_00189.pdb # 6: usage_00298.pdb # 7: usage_00306.pdb # # Length: 59 # Identity: 13/ 59 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 59 ( 45.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 -TDKELAVQYLNTFYGCPKESCNLFV---LKDTLKKMQKFFGLPQTGDLDQNTIETMRK 55 usage_00100.pdb 1 -TDKELAVQYLNTFYGCPKESCNLFV---LKDTLKKMQKFFGLPQTGDLDQNTIETMRK 55 usage_00101.pdb 1 -TDKELAVQYLNTFYGCPKESCNLFV---LKDTLKKMQKFFGLPQTGDLDQNTIETMRK 55 usage_00188.pdb 1 ---KELAVQYLNTFYGCPKESCN---LFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRK 53 usage_00189.pdb 1 -TDKELAVQYLNTFYGCPKESCN---LFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRK 55 usage_00298.pdb 1 ELQWEQAQDYLKRFYLYDSETKNANS---LEAKLKEMQKFFGLPITGMLNSRVIEIMQK 56 usage_00306.pdb 1 -TDRQLAEEYLYRYG-YT-----------LGPALLLLQKQLSLPETGELDSATLKAMR- 45 elA YL fy L Lk mQKffgLP TG Ld tie Mr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################