################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:11 2021 # Report_file: c_0731_35.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00108.pdb # 2: usage_00207.pdb # 3: usage_00328.pdb # 4: usage_00329.pdb # 5: usage_00330.pdb # 6: usage_00471.pdb # 7: usage_00472.pdb # 8: usage_00473.pdb # 9: usage_00474.pdb # 10: usage_00475.pdb # 11: usage_00563.pdb # 12: usage_00564.pdb # # Length: 70 # Identity: 30/ 70 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 70 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 70 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 -----------------Q-DQPWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 42 usage_00207.pdb 1 ------WFCVGESWP--Q-DQPWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 51 usage_00328.pdb 1 ----ALWFCVGESWP--Q-DQPWTKRLVMVKVVPTCLRALVEMARVGGASLENTVDLHI- 52 usage_00329.pdb 1 -----------------Q-DQPWTKRLVMVKVVPTCLRALVEMARVGGASLENTVDLHI- 41 usage_00330.pdb 1 ------WFCVGESWP--Q-DQPWTKRLVMVKVVPTCLRALVEMARVGGASLENTVDLHI- 50 usage_00471.pdb 1 ----ALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 53 usage_00472.pdb 1 ----ALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 53 usage_00473.pdb 1 ----ALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 53 usage_00474.pdb 1 SPRYALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 57 usage_00475.pdb 1 ----ALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 53 usage_00563.pdb 1 ---YALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 54 usage_00564.pdb 1 ---YALWFCV-G-ESWPQDQ-PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHI 54 Q PWTKRLVMVKVVPTCLRALVEMARVGGAS usage_00108.pdb 43 SNSHPLS-LT 51 usage_00207.pdb 52 SNSHPLS-LT 60 usage_00328.pdb 53 -SNSHPLLT- 60 usage_00329.pdb 42 -SNSHPLLT- 49 usage_00330.pdb 51 -SNSHPLLT- 58 usage_00471.pdb 54 SNSHPLS-LT 62 usage_00472.pdb 54 SNSHPLS-LT 62 usage_00473.pdb 54 SNSHPLS-LT 62 usage_00474.pdb 58 SNSHPLS-LT 66 usage_00475.pdb 54 SNSHPLS-LT 62 usage_00563.pdb 55 SNSHPLS-LT 63 usage_00564.pdb 55 SNSHPLS-LT 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################