################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:26 2021 # Report_file: c_1172_231.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_02675.pdb # 2: usage_03805.pdb # 3: usage_04402.pdb # 4: usage_04403.pdb # 5: usage_05275.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 65 ( 4.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 65 ( 70.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02675.pdb 1 ---------------DILVHTAYDES----------TDENVMLLTSDAPEYK-----PWA 30 usage_03805.pdb 1 ---------------KITKRTETVYDEKT----NILQNLQFDFIDDP-----TYDKNVLL 36 usage_04402.pdb 1 -NG------------KITKRTETVYDEKT----NILQNLQFDFIDDP-----TYDKNVLL 38 usage_04403.pdb 1 KNG------------KITKRTETVYDEKT----NILQNLQFDFIDDP-----TYDKNVLL 39 usage_05275.pdb 1 ---GDVVGPKQTALGEGWFINQHIVWQV-GDEDVAEMNWRILKF---------------- 40 i t n usage_02675.pdb 31 LVIQD 35 usage_03805.pdb 37 VKKQ- 40 usage_04402.pdb 39 VKKQ- 42 usage_04403.pdb 40 VKKQ- 43 usage_05275.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################