################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:47 2021 # Report_file: c_1212_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00364.pdb # 2: usage_00365.pdb # 3: usage_00420.pdb # 4: usage_00567.pdb # 5: usage_00777.pdb # 6: usage_00778.pdb # 7: usage_01270.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 53 ( 9.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 53 ( 66.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00364.pdb 1 ----EVEITRRG----REPAVI-----VSK----ATFEAYKKAALDAE----- 31 usage_00365.pdb 1 --GEEVEITRRG----REPAVI-----VSK----ATFEAYKKAALDAE----- 33 usage_00420.pdb 1 --GEEVEITRRG----REPAVI-----VSK----ATFEEW------------- 25 usage_00567.pdb 1 GEEAEYVVFGPEKEGVISVVVL-----APKDLNEEALALRVKWFND------- 41 usage_00777.pdb 1 --GEEVEITRRG----REPAVI-----VSK----ATFEAYKKAALDAEFASL- 37 usage_00778.pdb 1 --GEEVEITRRG----REPAVI-----VSK----ATFEAYKKAALDAEFASLF 38 usage_01270.pdb 1 ---ITVLVF---------GLPVSATTGMTA----IEFVAKVRVALQEAIASF- 36 ev v k f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################