################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:45 2021 # Report_file: c_1064_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00090.pdb # 6: usage_00236.pdb # 7: usage_00352.pdb # # Length: 62 # Identity: 8/ 62 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 62 ( 17.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 62 ( 33.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 SIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLA-DPC-FEWRR-DGELGVVYIR--- 54 usage_00029.pdb 1 -IKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLA-DPC-FEWRR-DGELGVVYIR--- 53 usage_00030.pdb 1 SIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLA-DPC-FEWRR-DGELGVVYIR--- 54 usage_00031.pdb 1 SIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLA-DPC-FEWRR-DGELGVVYIRERG 57 usage_00090.pdb 1 -LRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAG-KQ-DYNREE-DAALFKAWALFKG 56 usage_00236.pdb 1 WLTDFIIDALDSGRFWGVGWLDEQKRIFTVPGR-------------FD-DFYEAFLEERR 46 usage_00352.pdb 1 -FGDWLLGEVSSGQYEGLQWLNEARTVFRVPWKHFGRRDL---DEE-DAQIFKAWAVARG 55 dw SG G W E Fr P D usage_00028.pdb -- usage_00029.pdb -- usage_00030.pdb -- usage_00031.pdb -- usage_00090.pdb -- usage_00236.pdb 47 RH 48 usage_00352.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################