################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:40 2021 # Report_file: c_1253_114.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00103.pdb # 2: usage_00348.pdb # 3: usage_00503.pdb # 4: usage_00587.pdb # 5: usage_00596.pdb # 6: usage_00710.pdb # 7: usage_00953.pdb # 8: usage_00954.pdb # 9: usage_00956.pdb # 10: usage_00999.pdb # 11: usage_01129.pdb # 12: usage_01143.pdb # 13: usage_01376.pdb # 14: usage_01380.pdb # 15: usage_01418.pdb # 16: usage_01419.pdb # 17: usage_01420.pdb # # Length: 52 # Identity: 17/ 52 ( 32.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 52 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 52 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS-- 50 usage_00348.pdb 1 GPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGS-- 50 usage_00503.pdb 1 GPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGS-- 50 usage_00587.pdb 1 GPVVAMVLEGKNAVEVVRKMVGATNPKEAAPGTIRGDFGLDVGKNVIHAS-- 50 usage_00596.pdb 1 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS-- 50 usage_00710.pdb 1 GPVVCMVWEGTDVVKQGRRMLGETRPLESNPGTLRGDFCIDVGRNIVHGS-- 50 usage_00953.pdb 1 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS-- 50 usage_00954.pdb 1 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS-- 50 usage_00956.pdb 1 GPVVAMVWEGLNVVKTGAVMLGETNPADSKPGTIRGDFCIQVGRNIIHGS-- 50 usage_00999.pdb 1 GPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGS-- 50 usage_01129.pdb 1 APVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGS-- 50 usage_01143.pdb 1 GPIVGMVWEGLGVVKGGRVLLGATNPADSLPGTIRGDFAVDVGRNVCHGS-- 50 usage_01376.pdb 1 GPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGS-- 50 usage_01380.pdb 1 GPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGS-- 50 usage_01418.pdb 1 GPIVGMVWEGKGVVKGGRVLLGATNPADSLPGTIRGDFAVDVGRNVCHGS-- 50 usage_01419.pdb 1 GPIVGMVWEGKGVVKGGRVLLGATNPADSLPGTIRGDFAVDVGRNVCHGSDS 52 usage_01420.pdb 1 GPIVGMVWEGKGVVKGGRVLLGATNPADSLPGTIRGDFAVDVGRNVCHGS-- 50 gP MV eG V r G T P PG iRGDf Vg N HgS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################