################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:30:15 2021 # Report_file: c_0557_12.html ################################################################################################ #==================================== # Aligned_structures: 59 # 1: usage_00001.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00029.pdb # 8: usage_00031.pdb # 9: usage_00034.pdb # 10: usage_00047.pdb # 11: usage_00053.pdb # 12: usage_00057.pdb # 13: usage_00058.pdb # 14: usage_00059.pdb # 15: usage_00060.pdb # 16: usage_00063.pdb # 17: usage_00064.pdb # 18: usage_00065.pdb # 19: usage_00066.pdb # 20: usage_00068.pdb # 21: usage_00070.pdb # 22: usage_00071.pdb # 23: usage_00075.pdb # 24: usage_00077.pdb # 25: usage_00082.pdb # 26: usage_00083.pdb # 27: usage_00085.pdb # 28: usage_00087.pdb # 29: usage_00090.pdb # 30: usage_00091.pdb # 31: usage_00094.pdb # 32: usage_00095.pdb # 33: usage_00096.pdb # 34: usage_00100.pdb # 35: usage_00105.pdb # 36: usage_00106.pdb # 37: usage_00107.pdb # 38: usage_00111.pdb # 39: usage_00123.pdb # 40: usage_00129.pdb # 41: usage_00130.pdb # 42: usage_00141.pdb # 43: usage_00142.pdb # 44: usage_00143.pdb # 45: usage_00144.pdb # 46: usage_00145.pdb # 47: usage_00146.pdb # 48: usage_00147.pdb # 49: usage_00148.pdb # 50: usage_00149.pdb # 51: usage_00150.pdb # 52: usage_00168.pdb # 53: usage_00193.pdb # 54: usage_00194.pdb # 55: usage_00200.pdb # 56: usage_00202.pdb # 57: usage_00205.pdb # 58: usage_00208.pdb # 59: usage_00211.pdb # # Length: 84 # Identity: 3/ 84 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 84 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 84 ( 45.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----ENVEQHP----STLSVQEGDSAVIKCTYSDS-AS-----NYFPWYKQEL-GK-RPQ 44 usage_00016.pdb 1 -----QLTQSP----SSLSASVGDRVTITCRASQS-VDY-DGDSYMNWYQQKP-GK-APK 47 usage_00017.pdb 1 -----QLTQSP----SSLSASVGDRVTITCRASQS-VDY-DGDSYMNWYQQKP-GK-APK 47 usage_00018.pdb 1 -----QMTQSP----SSLSASVGDRVTITCRASGN-IH-----NYLAWYQQKP-GK-APK 43 usage_00021.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASES-VDN-YGISFMNWFQQKP-GK-APK 49 usage_00022.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQS-IS-----SYLNWYQQKP-GK-APK 45 usage_00029.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCQASQD-IS-----NYLNWYQQKP-GK-APK 44 usage_00031.pdb 1 ----IVMTQTP----KFLPVSAGDRVTIICKASQS-VS-----NDVVWYQQKP-GQ-SPK 44 usage_00034.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQD-VS-----TAVAWYQQKP-GK-APK 44 usage_00047.pdb 1 ---DIQMTQSP----ASLSASVGETVTITCRASGN-IH-----NYLAWYQQKQ-GK-SPQ 45 usage_00053.pdb 1 -----QMTQSP----SSLSASVGDRVTITCRASQD-IN-----NYLNWYQQKP-GK-APK 43 usage_00057.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQD-VS-----TAVAWYQQKP-GK-APK 44 usage_00058.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQV-IR-----RSLAWYQQKP-GK-APK 44 usage_00059.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRSSQS-LVHNNANTYLHWYQQKP-GK-APK 50 usage_00060.pdb 1 ---DIQMTQST----SSLSASLGDRVTISCRASQD-IS-----NYLNWYQQKP-DG-TVK 45 usage_00063.pdb 1 ----IVMTQSP----KFMSTSIGDRVNITCKATQN-VR-----TAVTWYQQKP-GQ-SPQ 44 usage_00064.pdb 1 ----IVM-TQP----KFMSTSIGDRVNITCKATQN-VR-----TAVTWYQQKP-GQ-SPQ 43 usage_00065.pdb 1 ----IQMTQSP----SSLSASLGERVSLTCRASQE-IS-----GYLSWLQQKP-DG-TIK 44 usage_00066.pdb 1 ----IQMTQSP----SSLSASLGERVSLTCRASQE-IS-----GYLSWLQQKP-DG-TIK 44 usage_00068.pdb 1 ---DIVLTQSH----KFMSTSVGDRVSITCKASQD-VG-----TAVAWYQQKP-GQ-SPK 45 usage_00070.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQG-IR-----NDLGWYQQKP-GK-APK 44 usage_00071.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQS-YA-----YAVAWYQQKP-GK-APK 44 usage_00075.pdb 1 ----IVLTQSP----SSLSASLGDTITITCHASQN-IN-----VWLSWYQQKP-GN-IPK 44 usage_00077.pdb 1 ----IQMTQSP----SSLSASLGERVSLTCRASQE-IS-----GYLYWLQQKP-DG-TIK 44 usage_00082.pdb 1 ----IVMTQSP----KSMSMSVGERVTLTCKASEN-VV-----TYVSWYQQKP-EQ-SPK 44 usage_00083.pdb 1 ----IVMTQSP----KSMSMSVGERVTLTCKASEN-VV-----TYVSWYQQKP-EQ-SPK 44 usage_00085.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQA-VS-----SAVAWYQQKP-GK-APK 44 usage_00087.pdb 1 ---DIQMTQSP----SSLSASLGGKVTITCKASQD-IN-----KYIAWYQHKP-GK-GPR 45 usage_00090.pdb 1 ----IQMTQSP----SSLSASLGGKVTITCKASQD-IN-----KYIAWYQHKP-GK-GPR 44 usage_00091.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQD-VS-----TAVAWYQQKP-GK-APK 45 usage_00094.pdb 1 ---DIQMTQSP----ASLSASVGETVTITCRASKN-IY-----SYLAWYQQKQ-GK-SPQ 45 usage_00095.pdb 1 ---DIELTQTP----VSLAASLGDRVTISCRASQD-IN-----NFLNWYQQKP-DG-TIK 45 usage_00096.pdb 1 -----SVTQPD----ARVTVSEGASLQLRCKYSYS-AT-----PYLFWYVQYP-RQ-GLQ 43 usage_00100.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCRASQD-IT-----NYVNWFQQRP-GQ-APK 44 usage_00105.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQS-VS-----SAVAWYQQKP-GK-APK 45 usage_00106.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQS-VS-----SAVAWYQQKP-GK-APK 45 usage_00107.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQS-VS-----SAVAWYQQKP-GK-APK 45 usage_00111.pdb 1 ---DIQMTQST----SSLSASLGDRVTISCRASQD-IS-----NYLNWYQQKP-DG-TVK 45 usage_00123.pdb 1 IQAWQLFVNE-PRSPTVVKGVAGSSVAVLCPYNRKESK-----SIKYWCLWEGAQNGRCP 54 usage_00129.pdb 1 ---DIQMTQTT----SSLSASLGDRVTISCRASQD-IS-----NYLNWYQQKP-DG-TVK 45 usage_00130.pdb 1 ---ETTVTQSP----ASLSVAIGEKVTIRCITSTD-ID-----DDMNWYQQKP-GE-PPK 45 usage_00141.pdb 1 ---DIQMTQSP----SFVSASVGDRVTITCRASQG-IS-----SYLAWYQQKP-GK-APK 45 usage_00142.pdb 1 ---DIQMTQSP----SFVSASVGDRVTITCRASQG-IS-----SYLAWYQQKP-GK-APK 45 usage_00143.pdb 1 ---DIQMTQSP----SFVSASVGDRVTITCRASQG-IS-----SYLAWYQQKP-GK-APK 45 usage_00144.pdb 1 ---DIQMTQSP----SFVSASVGDRVTITCRASQG-IS-----SYLAWYQQKP-GK-APK 45 usage_00145.pdb 1 ---DIQMTQSP----SFVSASVGDRVTITCRASQG-IS-----SYLAWYQQKP-GK-APK 45 usage_00146.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCQASQD-IS-----NYLNWYQQKP-GK-APK 44 usage_00147.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCQASQD-IS-----NYLNWYQQKP-GK-APK 44 usage_00148.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCRASQS-VS-----SAVAWYQQKP-GK-APK 45 usage_00149.pdb 1 ---YIQMTQSP----ASLSVSVGETVTITCRASEN-IY-----SFLAWYQQKQ-GK-SPQ 45 usage_00150.pdb 1 -----ELTQTP----VSLAASLGDRVTISCRASQD-IN-----NFLNWYQQKP-DG-TIK 43 usage_00168.pdb 1 ---DIQMTQSP----STLSASVGDRVTITCRASQS-IS-----SWLAWYQQKP-GK-APK 45 usage_00193.pdb 1 -----QMTQSP----SSLSASVGDRVTITCQASQD-IS-----DYLIWYQQKL-GK-APN 43 usage_00194.pdb 1 ---DIVMTQSQ----KFMSVTVGDRVSITCKTSQS-VG-----TTIVWYQQKP-GQ-SPK 45 usage_00200.pdb 1 ----IQMTQSP----ASLSASVGETVTITCRASEN-IY-----SYLAWYQQKQ-GK-SPQ 44 usage_00202.pdb 1 ----ILMTQSP----LSLSASLGDKVTITCQASQI-IY-----NYIAWYQQKP-GK-APR 44 usage_00205.pdb 1 ----IQMTQSP----SSLSASVGDRVTITCKASQD-VS-----IGVAWYQQKP-GK-APK 44 usage_00208.pdb 1 ----IQLTQSP----SSLSASVGDRVTITCRASQS-VDY-DGDSYMNWYQQKP-GK-APK 48 usage_00211.pdb 1 ---DIQMTQSP----SSLSASVGDRVTITCQASQD-IN-----NYLIWYQQKP-GQ-APK 45 G C W usage_00001.pdb 45 LIIDI-----------------RS 51 usage_00016.pdb 48 LLIYA------------------- 52 usage_00017.pdb 48 LLIYA------------------- 52 usage_00018.pdb 44 LLIYY------------------- 48 usage_00021.pdb 50 LLIYS------------------- 54 usage_00022.pdb 46 LLIYA------------------- 50 usage_00029.pdb 45 LLIYD------------------- 49 usage_00031.pdb 45 LLIYY------------------- 49 usage_00034.pdb 45 LLIYS------------------- 49 usage_00047.pdb 46 LLVYN------------------- 50 usage_00053.pdb 44 LLIYY------------------- 48 usage_00057.pdb 45 LLIYS------------------- 49 usage_00058.pdb 45 LLIYA------------------- 49 usage_00059.pdb 51 LLIYK------------------- 55 usage_00060.pdb 46 VLIYY------------------- 50 usage_00063.pdb 45 ALIFL------------------- 49 usage_00064.pdb 44 ALIFL------------------- 48 usage_00065.pdb 45 RLIYA------------------- 49 usage_00066.pdb 45 RLIYA------------------- 49 usage_00068.pdb 46 LLIYW------------------- 50 usage_00070.pdb 45 RLIYA------------------- 49 usage_00071.pdb 45 LLIYD------------------- 49 usage_00075.pdb 45 LLIYKASNLHTGVPSRFSGSGS-- 66 usage_00077.pdb 45 RLIYA------------------- 49 usage_00082.pdb 45 LLIYG------------------- 49 usage_00083.pdb 45 LLIYG------------------- 49 usage_00085.pdb 45 LLIYS------------------- 49 usage_00087.pdb 46 LLIHY------------------- 50 usage_00090.pdb 45 LLIQY------------------- 49 usage_00091.pdb 46 LLIYS------------------- 50 usage_00094.pdb 46 LLVYN------------------- 50 usage_00095.pdb 46 LLIYY------------------- 50 usage_00096.pdb 44 LLLKY-----------------Y- 49 usage_00100.pdb 45 VLIYG------------------- 49 usage_00105.pdb 46 LLIYS------------------- 50 usage_00106.pdb 46 LLIYS------------------- 50 usage_00107.pdb 46 LLIYS------------------- 50 usage_00111.pdb 46 VLIYY------------------- 50 usage_00123.pdb 55 LLVDS------------------- 59 usage_00129.pdb 46 LLIYY------------------- 50 usage_00130.pdb 46 FFISE------------------- 50 usage_00141.pdb 46 LVIYA------------------- 50 usage_00142.pdb 46 LVIYA------------------- 50 usage_00143.pdb 46 LVIYA------------------- 50 usage_00144.pdb 46 LVIYA------------------- 50 usage_00145.pdb 46 LVIYA------------------- 50 usage_00146.pdb 45 LLIYD------------------- 49 usage_00147.pdb 45 LLIYD------------------- 49 usage_00148.pdb 46 LLIYS------------------- 50 usage_00149.pdb 46 LLVYA------------------- 50 usage_00150.pdb 44 LLIYY------------------- 48 usage_00168.pdb 46 LLIYD------------------- 50 usage_00193.pdb 44 LLIYD------------------- 48 usage_00194.pdb 46 LLIYS------------------- 50 usage_00200.pdb 45 LLVYN------------------- 49 usage_00202.pdb 45 LLIRY------------------- 49 usage_00205.pdb 45 LLIYSASYRYTGVPSRFSGSG--- 65 usage_00208.pdb 49 LLIYA------------------- 53 usage_00211.pdb 46 LLIYD------------------- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################