################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:13 2021 # Report_file: c_0895_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00067.pdb # 4: usage_00131.pdb # 5: usage_00132.pdb # 6: usage_00146.pdb # 7: usage_00178.pdb # 8: usage_00188.pdb # # Length: 64 # Identity: 13/ 64 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 64 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 64 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 53 usage_00004.pdb 1 ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 53 usage_00067.pdb 1 ---TPEDVKTWLQSKGFNPVTVNSLGV--LNGAQLFSLNKDELRTVCPEGARVYSQITVQ 55 usage_00131.pdb 1 --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 54 usage_00132.pdb 1 --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 54 usage_00146.pdb 1 --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 54 usage_00178.pdb 1 NPGPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 56 usage_00188.pdb 1 ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF 53 pqdfllkmp GvNakncrSLmh kNiAeLaaLsqDELtsilgn AanakQlydf usage_00003.pdb 54 IH-- 55 usage_00004.pdb 54 IH-- 55 usage_00067.pdb 56 KAAL 59 usage_00131.pdb 55 IH-- 56 usage_00132.pdb 55 IHT- 57 usage_00146.pdb 55 IH-- 56 usage_00178.pdb 57 IHT- 59 usage_00188.pdb 54 IH-- 55 ih #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################