################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:51 2021 # Report_file: c_1414_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00640.pdb # 4: usage_00641.pdb # 5: usage_00642.pdb # 6: usage_00643.pdb # # Length: 88 # Identity: 76/ 88 ( 86.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 88 ( 86.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 88 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 --VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG----DIPKRCLK 54 usage_00028.pdb 1 --VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQFQ---DIPKRCLK 55 usage_00640.pdb 1 -SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 59 usage_00641.pdb 1 -SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQG-VHQ----DIPKRCLK 54 usage_00642.pdb 1 ---SEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQG-VH-----DIPKRCLK 51 usage_00643.pdb 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQG-VH-----DIPKRCLK 54 SEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQG DIPKRCLK usage_00027.pdb 55 AREHFGTVKTHLTSLKTKFPAEQYYRFH 82 usage_00028.pdb 56 AREHFGTVKTHLTSLKTKFPAEQYYRFH 83 usage_00640.pdb 60 AREHFGTVKTHLTSLKTKFPAEQYYRF- 86 usage_00641.pdb 55 AREHFGTVKTHLTSLKTKFPAEQYYRFH 82 usage_00642.pdb 52 AREHFGTVKTHLTSLKTKFPAEQYYRFH 79 usage_00643.pdb 55 AREHFGTVKTHLTSLKTKFPAEQYYRFH 82 AREHFGTVKTHLTSLKTKFPAEQYYRF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################