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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:18:26 2021
# Report_file: c_1223_40.html
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#====================================
# Aligned_structures: 5
#   1: usage_00258.pdb
#   2: usage_00395.pdb
#   3: usage_00963.pdb
#   4: usage_00990.pdb
#   5: usage_00991.pdb
#
# Length:        126
# Identity:       11/126 (  8.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/126 ( 15.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           65/126 ( 51.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00258.pdb         1  KLYIVSNKFINTMSQVPTISQLLPLPKHKS---------WDYLYEPD----PKALLDTLL   47
usage_00395.pdb         1  KISIFYNDPVS--SFEPSEKPIF--------------------NAKTIDTD-ANVPRDLF   37
usage_00963.pdb         1  KISIFYNDPVS--SFEPSEKPIF--------------------NAKTIDTD-ANVPRDLF   37
usage_00990.pdb         1  KLTIFYNEFVSPIVQRPVEKQLLPLT----SEEVLDGPVSAYEYEPD----SESVLEVLL   52
usage_00991.pdb         1  KLTIFYNEFVSPIVQRPVEKQLLPLT----SEEVLDGPVSAYEYEPD----SESVLEVLL   52
                           K  IfyN  vs     P ek                                  v   L 

usage_00258.pdb        48  RRYVESQVYQGVVENLASEQAARMVAMK--------------------------------   75
usage_00395.pdb        38  EYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDI   97
usage_00963.pdb        38  EYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDT   97
usage_00990.pdb        53  PKYAETLIYSALLDAKASEFGARMTAMGNATDNATEMLETLTLQFNRARQAAITQEIAEI  112
usage_00991.pdb        53  PKYAETLIYSALLDAKASEFGARMTAMGNATDNATEMLETLTLQFNRARQAAITQEIAEI  112
                                     a     A E  AR  AM                                 

usage_00258.pdb            ------     
usage_00395.pdb        98  ITGASS  103
usage_00963.pdb        98  ITGA--  101
usage_00990.pdb       113  VAGANA  118
usage_00991.pdb       113  VAGANA  118
                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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