################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:01 2021 # Report_file: c_1117_29.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00163.pdb # 2: usage_00448.pdb # 3: usage_00449.pdb # 4: usage_00585.pdb # 5: usage_00586.pdb # 6: usage_00587.pdb # 7: usage_00588.pdb # 8: usage_00589.pdb # # Length: 104 # Identity: 19/104 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/104 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/104 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 -REEMTLLGFEIVAYAGDARSKLLEALKAAENGDFAKADSLVVEAGSCIAEAHSSQTGML 59 usage_00448.pdb 1 --TTAEQIPFQLILNSGNARSFAEALQFAKQG-K-AEADE-AVKAKEAINEAHHFQTELI 55 usage_00449.pdb 1 ------QIPFQLILNSGNARSFAEALQFAKQG-K-AEADE-AVKAKEAINEAHHFQTELI 51 usage_00585.pdb 1 -TEELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLL 59 usage_00586.pdb 1 NTEELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLL 60 usage_00587.pdb 1 -TEELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLL 59 usage_00588.pdb 1 --EELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLL 58 usage_00589.pdb 1 -TEELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLL 59 F ilnsGnARS A A A AH QT l usage_00163.pdb 60 AREASGEELPYSVTMMHGQDHLM---TTILLKD----------- 89 usage_00448.pdb 56 QSEARGEKTEISVLLIHAQDHLNAITVKELAAEFIDLYKKLEA- 98 usage_00449.pdb 52 QSEARGEKTEISVLLIHAQDHLNAITVKELAAEFIDLYKKLEAK 95 usage_00585.pdb 60 QEYASGTEIKIEIIMVHAQDHLM---TTMTLREVAIEMLELYKK 100 usage_00586.pdb 61 QEYASGTEIKIEIIMVHAQDHLM---TTMTLREVAIEMLELYK- 100 usage_00587.pdb 60 QEYASGTEIKIEIIMVHAQDHLM---TTMTLREVAIEMLELYK- 99 usage_00588.pdb 59 QEYASGTEIKIEIIMVHAQDHLM---TTMTLREVAIEMLELY-- 97 usage_00589.pdb 60 QEYASGTEIKIEIIMVHAQDHLM---TTMTLREVAIEMLELY-- 98 q A G i HaQDHL e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################