################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:49:10 2021 # Report_file: c_0083_15.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00082.pdb # 6: usage_00253.pdb # 7: usage_00254.pdb # 8: usage_00302.pdb # 9: usage_00303.pdb # 10: usage_00304.pdb # 11: usage_00308.pdb # 12: usage_00309.pdb # 13: usage_00310.pdb # 14: usage_00311.pdb # 15: usage_00372.pdb # 16: usage_00400.pdb # 17: usage_00401.pdb # # Length: 248 # Identity: 218/248 ( 87.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 219/248 ( 88.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/248 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----AMMYIQELRSGLRDMHLLSCLESLRVSLTSHPVSWVQTFGAEGLASLLDILKRLHD 56 usage_00003.pdb 1 ----AMMYIQELRSGLRDMHLLSCLESLRVSLTSHPVSWVQTFGAEGLASLLDILKRLHD 56 usage_00011.pdb 1 -----MMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 55 usage_00012.pdb 1 -----MMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 55 usage_00082.pdb 1 ---SAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 57 usage_00253.pdb 1 -----MMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 55 usage_00254.pdb 1 ------MYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 54 usage_00302.pdb 1 -----MMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 55 usage_00303.pdb 1 ---SAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 57 usage_00304.pdb 1 ---SAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 57 usage_00308.pdb 1 --RSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 58 usage_00309.pdb 1 SSRSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 60 usage_00310.pdb 1 --RSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 58 usage_00311.pdb 1 SSRSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 60 usage_00372.pdb 1 ---SAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 57 usage_00400.pdb 1 ----AMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 56 usage_00401.pdb 1 ----AMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHD 56 MYIQELRSGLRDMHLLSCLESLRVSL PVSWVQTFGAEGLASLLDILKRLHD usage_00002.pdb 57 E-------KDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 109 usage_00003.pdb 57 E-------KDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 109 usage_00011.pdb 56 E-------KDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 108 usage_00012.pdb 56 EK------YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 109 usage_00082.pdb 58 EK-----NYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 112 usage_00253.pdb 56 E-------KDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 108 usage_00254.pdb 55 E-------YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 107 usage_00302.pdb 56 E-K-ESGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 113 usage_00303.pdb 58 K-EETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 116 usage_00304.pdb 58 E-------YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 110 usage_00308.pdb 59 EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 118 usage_00309.pdb 61 E-------YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 113 usage_00310.pdb 59 EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 118 usage_00311.pdb 61 EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 120 usage_00372.pdb 58 EK----GNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 113 usage_00400.pdb 57 EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 116 usage_00401.pdb 57 EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 116 e DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA usage_00002.pdb 110 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 169 usage_00003.pdb 110 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 169 usage_00011.pdb 109 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 168 usage_00012.pdb 110 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 169 usage_00082.pdb 113 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 172 usage_00253.pdb 109 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 168 usage_00254.pdb 108 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 167 usage_00302.pdb 114 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 173 usage_00303.pdb 117 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 176 usage_00304.pdb 111 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 170 usage_00308.pdb 119 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 178 usage_00309.pdb 114 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 173 usage_00310.pdb 119 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 178 usage_00311.pdb 121 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 180 usage_00372.pdb 114 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 173 usage_00400.pdb 117 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 176 usage_00401.pdb 117 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA 176 KLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINA usage_00002.pdb 170 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 229 usage_00003.pdb 170 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 229 usage_00011.pdb 169 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 228 usage_00012.pdb 170 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 229 usage_00082.pdb 173 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDL---- 228 usage_00253.pdb 169 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 228 usage_00254.pdb 168 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 227 usage_00302.pdb 174 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 233 usage_00303.pdb 177 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 236 usage_00304.pdb 171 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 230 usage_00308.pdb 179 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 238 usage_00309.pdb 174 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 233 usage_00310.pdb 179 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 238 usage_00311.pdb 181 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 240 usage_00372.pdb 174 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLK--- 230 usage_00400.pdb 177 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 236 usage_00401.pdb 177 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL 236 LITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDL usage_00002.pdb 230 DDIRME-- 235 usage_00003.pdb 230 DDIRME-- 235 usage_00011.pdb 229 DDIRME-- 234 usage_00012.pdb 230 DDIRME-- 235 usage_00082.pdb -------- usage_00253.pdb 229 DDIRMEMD 236 usage_00254.pdb 228 DDIRMEMD 235 usage_00302.pdb 234 DDIRMEMD 241 usage_00303.pdb 237 DDIRME-- 242 usage_00304.pdb 231 DDIRM--- 235 usage_00308.pdb 239 DDIRME-- 244 usage_00309.pdb 234 DDIRME-- 239 usage_00310.pdb 239 DDIRME-- 244 usage_00311.pdb 241 DDIRME-- 246 usage_00372.pdb -------- usage_00400.pdb 237 DDIRME-- 242 usage_00401.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################