################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:33 2021 # Report_file: c_0653_29.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00486.pdb # 2: usage_00672.pdb # 3: usage_00673.pdb # 4: usage_00915.pdb # 5: usage_00939.pdb # 6: usage_01168.pdb # 7: usage_01169.pdb # 8: usage_01170.pdb # 9: usage_01171.pdb # 10: usage_01172.pdb # 11: usage_01173.pdb # # Length: 84 # Identity: 30/ 84 ( 35.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 84 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 84 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00486.pdb 1 RGWEPCTEMRYVRGGVLCGQSLMALKCADGNHLTCQLRTTYRSKKPAKKLQMPAFHFSDH 60 usage_00672.pdb 1 QGWEPCCE-RYTRDGVLCGQTL-ALKCADGNHLTCHLRTTYRSKKAAKAL-QPPFHFSDH 57 usage_00673.pdb 1 QGWEPCCE-RYTRDGVLCGQTL-ALKCADGNHLTCHLRTTYRSKKAAKAL-QPPFHFSDH 57 usage_00915.pdb 1 AGWEPSVEILYPRDGVLCGQALMALKCTDGDHLTSHLRTTYRSRKPSNAVNMPEFHFGDH 60 usage_00939.pdb 1 -RWEPGTEIVYEVDGVLRGQSLMALKCPGGRHLTCHLHTTYRSKKPASALKMPGFHFEDH 59 usage_01168.pdb 1 GGWEPSCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 60 usage_01169.pdb 1 GGWEPSCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 60 usage_01170.pdb 1 GGWEPSCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 60 usage_01171.pdb 1 GGWEPSCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 60 usage_01172.pdb 1 -----GCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 55 usage_01173.pdb 1 -----GCEILYEVDGVLCGQSLMALKCPGGRHLNCRLHTTYRSKKPASALKMPEFHFEDH 55 E Y dGVLcGQ L ALKC G HL c L TTYRSkK a al P FHF DH usage_00486.pdb 61 RPEI-LKVSENGN-LMEQYEMSVG 82 usage_00672.pdb 58 RPEIVKVSENGTL-FEQHESSVA- 79 usage_00673.pdb 58 RPEIVKVSENGTL-FEQHESSVA- 79 usage_00915.pdb 61 RIEI-LKAEQGKF-YEQYESAVAR 82 usage_00939.pdb 60 RIEI-MEEVEKGKCYKQYEAAVG- 81 usage_01168.pdb 61 RIEV-KEVQKGKH-YEQYEAAVAR 82 usage_01169.pdb 61 RIEV-KEVQKGKH-YEQYEAAVAR 82 usage_01170.pdb 61 RIEV-KEVQKGKH-YEQYEAAVAR 82 usage_01171.pdb 61 RIEV-KEVQKGKH-YEQYEAAVAR 82 usage_01172.pdb 56 RIEV-KEVQKGKH-YEQYEAAVAR 77 usage_01173.pdb 56 RIEV-KEVQKGKH-YEQYEAAVAR 77 R E q e v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################