################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:19:32 2021 # Report_file: c_0686_38.html ################################################################################################ #==================================== # Aligned_structures: 45 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00047.pdb # 4: usage_00141.pdb # 5: usage_00147.pdb # 6: usage_00167.pdb # 7: usage_00168.pdb # 8: usage_00192.pdb # 9: usage_00226.pdb # 10: usage_00227.pdb # 11: usage_00282.pdb # 12: usage_00307.pdb # 13: usage_00353.pdb # 14: usage_00418.pdb # 15: usage_00459.pdb # 16: usage_00495.pdb # 17: usage_00566.pdb # 18: usage_00580.pdb # 19: usage_00602.pdb # 20: usage_00617.pdb # 21: usage_00630.pdb # 22: usage_00675.pdb # 23: usage_00681.pdb # 24: usage_00685.pdb # 25: usage_00686.pdb # 26: usage_00688.pdb # 27: usage_00689.pdb # 28: usage_00690.pdb # 29: usage_00741.pdb # 30: usage_00747.pdb # 31: usage_00748.pdb # 32: usage_00749.pdb # 33: usage_00750.pdb # 34: usage_00751.pdb # 35: usage_00752.pdb # 36: usage_00763.pdb # 37: usage_00770.pdb # 38: usage_00795.pdb # 39: usage_00808.pdb # 40: usage_00845.pdb # 41: usage_00856.pdb # 42: usage_00862.pdb # 43: usage_00865.pdb # 44: usage_00868.pdb # 45: usage_00874.pdb # # Length: 48 # Identity: 39/ 48 ( 81.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 48 ( 81.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 48 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00003.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00047.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00141.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00147.pdb 1 SVFPLAPS------GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00167.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00168.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00192.pdb 1 SVFPLAP---------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 39 usage_00226.pdb 1 SVFPLAPS-S---SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 44 usage_00227.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00282.pdb 1 SVFPLAPS-SK----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 43 usage_00307.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00353.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00418.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00459.pdb 1 SVFPLAPS--------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 40 usage_00495.pdb 1 SVFPLAP---------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 39 usage_00566.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00580.pdb 1 SVFPLAPS-----SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 43 usage_00602.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00617.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00630.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00675.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00681.pdb 1 SVFPLAPSG-------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00685.pdb 1 SVFPLAP---------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 39 usage_00686.pdb 1 SVFPLAP-------GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00688.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00689.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00690.pdb 1 SVFPLAP-------GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00741.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00747.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00748.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00749.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00750.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00751.pdb 1 SVFPLAPS-S-----GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00752.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00763.pdb 1 SVFPLAPS------GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 42 usage_00770.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00795.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00808.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00845.pdb 1 SVFPLAPS-------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 41 usage_00856.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00862.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00865.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 usage_00868.pdb 1 SVFPLAPS-----SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 43 usage_00874.pdb 1 SVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 47 SVFPLAP TAALGCLVKDYFPEPVTVSWNSGALTSGVHTF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################