################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:37 2021 # Report_file: c_0970_14.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00079.pdb # 2: usage_00249.pdb # 3: usage_00251.pdb # 4: usage_00252.pdb # 5: usage_00311.pdb # 6: usage_00541.pdb # 7: usage_00542.pdb # 8: usage_00543.pdb # 9: usage_00545.pdb # 10: usage_00546.pdb # 11: usage_00558.pdb # 12: usage_00559.pdb # 13: usage_00793.pdb # 14: usage_00984.pdb # 15: usage_00985.pdb # 16: usage_00986.pdb # 17: usage_01157.pdb # 18: usage_01158.pdb # 19: usage_01208.pdb # # Length: 53 # Identity: 15/ 53 ( 28.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 53 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 53 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 -GLYVPLEDKTFLLLTVHR--RGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 50 usage_00249.pdb 1 -GLYVPLEDKTFLLLT-V---RGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 48 usage_00251.pdb 1 DGLYVPLEDKTFLLLTVH---RGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 50 usage_00252.pdb 1 DGLYVPLEDKTFLLLTVHR--RGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 51 usage_00311.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00541.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00542.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00543.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00545.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00546.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00558.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00559.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00793.pdb 1 --YFYKLSEDSVILATYNQVYEGTHQPIKVRKVYGELPVEVLCSQILSLTLNY 51 usage_00984.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 usage_00985.pdb 1 DGLYVPLEDKTFLLLT-V-----TPRPLKLVHEAGDTPLEALAHQIFHLTRLY 47 usage_00986.pdb 1 --LYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 51 usage_01157.pdb 1 --LYVPLEDKTFLLLTVH---RGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 48 usage_01158.pdb 1 -GLYVPLEDKTFLLLTVH----GTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 48 usage_01208.pdb 1 -GLYVPLEDKTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLY 52 lyvpLedktflLlT TprPlKlvheaGdtPlEaLahQIfhLTrlY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################