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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:21:16 2021
# Report_file: c_0136_3.html
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#====================================
# Aligned_structures: 6
#   1: usage_00008.pdb
#   2: usage_00043.pdb
#   3: usage_00044.pdb
#   4: usage_00066.pdb
#   5: usage_00067.pdb
#   6: usage_00080.pdb
#
# Length:        172
# Identity:       44/172 ( 25.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    131/172 ( 76.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/172 ( 23.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  -VGSQLLLSTLTPH--------TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAV   51
usage_00043.pdb         1  -PASLLLLEALQ--ERLGPEGVRGRQVLDLGAGYGALTLPLAR-MG-AEVVGVEDDLASV   55
usage_00044.pdb         1  DPASLLLLEALQ--ERLGPEGVRGRQVLDLGAGYGALTLPLAR-MG-AEVVGVEDDLASV   56
usage_00066.pdb         1  -----------------GPEGVRGRQVLDLGAGYGALTLPLAR-MG-AEVVGVEDDLASV   41
usage_00067.pdb         1  -----------------GPEGVRGRQVLDLGAGYGALTLPLAR-MG-AEVVGVEDDLASV   41
usage_00080.pdb         1  -----------------GPEGVRGRQVLDLGAGYGALTLPLAR-MG-AEVVGVEDDLASV   41
                                                 rgrqVLDlGaGyGaLtlplAR mg aevvgveddlasV

usage_00008.pdb        52  EASRATLAANGVEGEVFASNVFSEVK--GRFD-IISNPPFHDGMQTS-----LDAAQTLI  103
usage_00043.pdb        56  LSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH-V----GGAVILDVAQAFV  110
usage_00044.pdb        57  LSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH-V----GGAVILDVAQAFV  111
usage_00066.pdb        42  LSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH-V----GGAVILDVAQAFV   96
usage_00067.pdb        42  LSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH-V----GGAVILDVAQAFV   96
usage_00080.pdb        42  LSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH-V----GGAVILDVAQAFV   96
                           lslqkgLeANalkaqalhSdVdealt  aRFD IvtNPPFH v         LDvAQafv

usage_00008.pdb       104  RGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI---  152
usage_00043.pdb       111  NVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAE-YKVLFAE---  158
usage_00044.pdb       112  NVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAE-YKVLFAEKRG  162
usage_00066.pdb        97  NVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAE-YKVLFAE---  144
usage_00067.pdb        97  NVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAE-YKVLFAE---  144
usage_00080.pdb        97  NVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAE-YKVLFAE---  144
                           nvAaarLrpGGvfflVsNpFLkYeplLeEkFGafqtlkvae yKVlfAe   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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