################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:25 2021 # Report_file: c_1113_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00067.pdb # 2: usage_00188.pdb # 3: usage_00498.pdb # 4: usage_00524.pdb # 5: usage_00689.pdb # 6: usage_00692.pdb # 7: usage_00705.pdb # 8: usage_00706.pdb # 9: usage_00965.pdb # 10: usage_00966.pdb # 11: usage_00967.pdb # 12: usage_00975.pdb # 13: usage_01075.pdb # # Length: 104 # Identity: 9/104 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/104 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/104 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 -PDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTRFP--- 49 usage_00188.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00498.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00524.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00689.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTRFP--- 50 usage_00692.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00705.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTRFP--- 50 usage_00706.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTRFP--- 50 usage_00965.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00966.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00967.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTQFP--- 50 usage_00975.pdb 1 DPDKELSYRQQAANLLQDM--GQRLNVSQLTINTAIVYMHRFYMIQS-----FTRFP--- 50 usage_01075.pdb 1 -------AFEQGVRAILGQLV---------SVAMAAKLTARVAQLYGERLDDFPEYICFP 44 yrqQaanllqdm tintAivymhRfymiqs Ft fp usage_00067.pdb 50 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTCLHP 84 usage_00188.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTCL-- 83 usage_00498.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTC--- 82 usage_00524.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTCLHP 85 usage_00689.pdb 51 --------GNSVAPAAL-FLAAKVEGQPKKLEHVIKVAHTCL-- 83 usage_00692.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTC--- 82 usage_00705.pdb 51 --------GNSVAPAAL-FLAAKVEGQPKKLEHVIKVAHTCL-- 83 usage_00706.pdb 51 --------GNSVAPAAL-FLAAKVEGQPKKLEHVIKVAHTCLHP 85 usage_00965.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTC--- 82 usage_00966.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTC--- 82 usage_00967.pdb 51 --------GNSVAPAAL-FLAAKVEEQPKKLEHVIKVAHTC--- 82 usage_00975.pdb 51 --------GNSVAPAAL-FLAAKVEGQPKKLEHVIKVAHTCLHP 85 usage_01075.pdb 45 TPQRLAAADPQALKALGM--PLK------RAEALIHLANAALEG 80 gnsvapAal aaK klEhvIkvAhtc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################