################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:25 2021 # Report_file: c_1115_157.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00880.pdb # 2: usage_01096.pdb # 3: usage_01097.pdb # 4: usage_01609.pdb # # Length: 106 # Identity: 10/106 ( 9.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/106 ( 26.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/106 ( 37.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00880.pdb 1 NPEVEAKLDVARRLFKRYDKDGSGQLQDDEIAGLLKDTYAEM-G----------MSNF-- 47 usage_01096.pdb 1 -DASKAKMEELERRFKMADVDGNGHIDREELRNLL----ESM----ESGEVYMM----SQ 47 usage_01097.pdb 1 -DASKAKMEELERRFKMADVDGNGHIDREELRNLL----ESM----ESGEVYMM----SQ 47 usage_01609.pdb 1 -----ELNDKLIWAFQLYDLDNNGLISYDEMLRIV----DAIYKMV------GSMVK--- 42 ak l r Fk D DgnG i E ll m usage_00880.pdb 48 -TPTKE--DVKIWLQMADT----NSDGSVSLEEYEDLIIKSLQKAG 86 usage_01096.pdb 48 HWLPED--ELERCMEQYDV----NKDGVISFEEFKQIIYDG----- 82 usage_01097.pdb 48 HWLPED--ELERCMEQYDV----NKDGVISFEEFKQIIYDG----- 82 usage_01609.pdb 43 -LPE-DEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP---- 82 d e d NkDG s EEf i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################