################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:09 2021 # Report_file: c_0200_4.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00014.pdb # 2: usage_00059.pdb # 3: usage_00140.pdb # 4: usage_00172.pdb # # Length: 223 # Identity: 114/223 ( 51.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 196/223 ( 87.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/223 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -SLISALVRAHVDSNPAMTSLDYSRFQAN------DTQHIQQFYDLLTGSMEIIRGWAEK 53 usage_00059.pdb 1 -NLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHKEDAGDVQQFYDLLSGSLEVIRKWAEK 59 usage_00140.pdb 1 ANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHKEDAGDVQQFYDLLSGSLEVIRKWAEK 60 usage_00172.pdb 1 -NLLTSLVRAHLDSGPSTAKLDYSKFQELVLP-KEDAGDVQQFYDLLSGSLEVIRKWAEK 58 nLltsLVRAHlDSgPstakLDYSkFQel DagdvQQFYDLLsGSlEvIRkWAEK usage_00014.pdb 54 IPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWI 113 usage_00059.pdb 60 IPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFGDWI 119 usage_00140.pdb 61 IPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFGDWI 120 usage_00172.pdb 59 IPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFGDWI 118 IPGFAeLspADQDLLlESAFLELFiLRLAYRSkPgEGKLIFCsGlVLHRLQCaRGFGdWI usage_00014.pdb 114 DSIVEFSSNLQN-NIDISAFSCIAALA-VTERHGLKEPKRVEELQNKIVNCLKDHVTFNN 171 usage_00059.pdb 120 DSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQNRIASCLKEHVAA-- 177 usage_00140.pdb 121 DSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQNRIASCLKEHVAA-- 178 usage_00172.pdb 119 DSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQNRIASCLKEHVAA-- 176 DSIlaFSrsLhs lvDvpAFaClsALv iTdRHGLqEPrRVEELQNrIasCLKeHVaa usage_00014.pdb 172 GGLNRP------NYLSKLLGKLPELRTLCTQGLQRIFYLKLED 208 usage_00059.pdb 178 ------VAGEPASCLSRLLGKLPELRTLCTQGLQRIFYLKLED 214 usage_00140.pdb 179 ------VAGEPASCLSRLLGKLPELRTLCTQGLQRIFYLKLED 215 usage_00172.pdb 177 ------VAPQASCLSRLLGKLPELRTLCTQGLQRIFYLKLED- 212 ls Llgklpelrtlctqglqrifylkle #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################