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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:58:49 2021
# Report_file: c_1281_17.html
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#====================================
# Aligned_structures: 3
#   1: usage_00011.pdb
#   2: usage_00700.pdb
#   3: usage_00997.pdb
#
# Length:         88
# Identity:       39/ 88 ( 44.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     64/ 88 ( 72.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 88 ( 23.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00011.pdb         1  RLY-VIFR--GEEGL---DYGG----LAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQIN   50
usage_00700.pdb         1  ---WIEF---DGEK----GL--DYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQIN   48
usage_00997.pdb         1  RLW-IEFESE-KGLDYGG--------VAREWFFLLSKEMFNPYYGLFEYSATDNYTLQIN   50
                               ieF     e             vAREWFFLlSkEmfNPyYgLFEYsatdNYtLQIN

usage_00011.pdb        51  PAST-INPDHLSYFCFIGRFIAMALFHG   77
usage_00700.pdb        49  PNSG-INPDHLSYFKFIGRVAGMAVYHG   75
usage_00997.pdb        51  PNSGLCNEDHLSYFTFIGRVAGLAVFHG   78
                           PnSg iNpDHLSYF FIGRvagmAvfHG


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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