################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:24:33 2021 # Report_file: c_0230_35.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00014.pdb # 2: usage_00022.pdb # 3: usage_00066.pdb # 4: usage_00626.pdb # 5: usage_00631.pdb # 6: usage_00673.pdb # 7: usage_00810.pdb # 8: usage_01148.pdb # 9: usage_01153.pdb # 10: usage_01861.pdb # 11: usage_01947.pdb # 12: usage_02401.pdb # 13: usage_02655.pdb # 14: usage_02664.pdb # 15: usage_02986.pdb # # Length: 143 # Identity: 64/143 ( 44.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/143 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/143 ( 25.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_00022.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_00066.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRF-- 58 usage_00626.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_00631.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_00673.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLAAAA-- 58 usage_00810.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_01148.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_01153.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_01861.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_01947.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_02401.pdb 1 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGE 60 usage_02655.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_02664.pdb 1 KIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGE 60 usage_02986.pdb 1 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGE 60 KIVEID HIGCAMSGL ADA I AR H Y E VES TQ V LAl f usage_00014.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_00022.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELL- 119 usage_00066.pdb 59 --------MSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 110 usage_00626.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_00631.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_00673.pdb 59 -------AMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 111 usage_00810.pdb 61 -------LMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 113 usage_01148.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_01153.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_01861.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_01947.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_02401.pdb 61 ED-------SRPFGVALLFGGVDE-KGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQE 112 usage_02655.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_02664.pdb 61 GASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLN 120 usage_02986.pdb 61 ED-------SRPFGVALLFGGVDE-KGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQE 112 SRPFGVALL G D G QLFH PSGTF A AIGS SEGAQ L usage_00014.pdb 121 E---------------------- 121 usage_00022.pdb ----------------------- usage_00066.pdb ----------------------- usage_00626.pdb 121 EWHSSLTLKEAELLVLKILKQ-- 141 usage_00631.pdb 121 EWHSSLTLKEAELLVLKILKQ-- 141 usage_00673.pdb 112 E---------------------- 112 usage_00810.pdb 114 EW--------------------- 115 usage_01148.pdb 121 EWHSSLTLKEAELLVLKILKQ-- 141 usage_01153.pdb 121 EWHSSLTLKEAELLVLKILKQ-- 141 usage_01861.pdb 121 EW--------------------- 122 usage_01947.pdb 121 EW--------------------- 122 usage_02401.pdb 113 VYHKSMTLKEAIKSSLIILKQVM 135 usage_02655.pdb 121 EW--------------------- 122 usage_02664.pdb 121 EW--------------------- 122 usage_02986.pdb 113 VYHKSMTLKEAIKSSLIILKQVM 135 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################