################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:20 2021 # Report_file: c_1452_40.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00980.pdb # 2: usage_00981.pdb # 3: usage_01233.pdb # 4: usage_03136.pdb # 5: usage_04424.pdb # 6: usage_05364.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 50 ( 24.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 50 ( 68.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00980.pdb 1 ------------------------EPIVTSQLGTVN--------NIIQV- 17 usage_00981.pdb 1 ------------------------EPIVTSQLGTVN--------NIIQV- 17 usage_01233.pdb 1 ------GEHQYKFFVDGQWVHDPSEPVVTSQLGTIN--------NLIHVK 36 usage_03136.pdb 1 ------GEHQYKFFVDGQWTHDPSEPIVTSQLGTVN--------NIIQVK 36 usage_04424.pdb 1 DQFSVYVHS---------------TCKSALWDNVFKRNCTDVLDATAV-I 34 usage_05364.pdb 1 ------GEHQYKFFVDGQWTHDPSEPIVTSQLGTVN--------NIIQVK 36 ep vtsqlgt n n i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################