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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:11:53 2021
# Report_file: c_1378_71.html
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#====================================
# Aligned_structures: 9
#   1: usage_00168.pdb
#   2: usage_00184.pdb
#   3: usage_00198.pdb
#   4: usage_00260.pdb
#   5: usage_00476.pdb
#   6: usage_00725.pdb
#   7: usage_00799.pdb
#   8: usage_00939.pdb
#   9: usage_00976.pdb
#
# Length:         88
# Identity:        0/ 88 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      2/ 88 (  2.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           69/ 88 ( 78.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00168.pdb         1  ------------------PNMAAMTGRFF---------------------TRDDKKKLLI   21
usage_00184.pdb         1  -------------QKLMQEMKEAFTM---IDQ-----NRDGF----IDINDLKEMFSSLG   35
usage_00198.pdb         1  -------------QKLMQEMKEAFTM---IDQ-----NRDGF----IDINDLKEMFSSLG   35
usage_00260.pdb         1  ------------PQKQIQEMKEAFSM---IDV-----DRDGF----VSKEDIKAISEQLG   36
usage_00476.pdb         1  -------------QKQIQEMKEAFSM---IDV-----DRDGF----VSKEDIKAISEQLG   35
usage_00725.pdb         1  DKVKAEAQIAKMEEQRKANMLAHMET---QNKIYNIL-------------TPEQKKQFNA   44
usage_00799.pdb         1  -------------QKLMQEMKEAFTM---IDQ-----NRDGF----IDINDLKEMFSSLG   35
usage_00939.pdb         1  -------------APILDKAVKAK--------------GEKLEWRT----SIVDLMKALD   29
usage_00976.pdb         1  ------------PQKQIQEMKEAFSM---IDV-----DRDGF----VSKEDIKAISEQLG   36
                                                 a                                   l 

usage_00168.pdb        22  AIG-VLNEDLVP----NPAIEKCAEKYK   44
usage_00184.pdb        36  --R-T------P---DDKELTAMLK---   48
usage_00198.pdb        36  --R-T------P---DDKELTAMLK---   48
usage_00260.pdb        37  --R-A------P---DDKELTAMLK-E-   50
usage_00476.pdb        36  --R-A------P---DDKELTAMLK---   48
usage_00725.pdb        45  ------------------NFE-------   47
usage_00799.pdb        36  --R-T------P---DDKELTAMLK---   48
usage_00939.pdb        30  --ID-------SSLSARKELAKELG---   45
usage_00976.pdb        37  --R-A------P---DDKELTAMLK---   49
                                                       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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