################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:47 2021 # Report_file: c_0435_47.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00035.pdb # 2: usage_00115.pdb # 3: usage_00116.pdb # 4: usage_00207.pdb # 5: usage_00234.pdb # 6: usage_00303.pdb # 7: usage_00392.pdb # 8: usage_00471.pdb # 9: usage_00586.pdb # # Length: 110 # Identity: 23/110 ( 20.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/110 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/110 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 ---------VKIPVAIKELRE---ATSPKANKEILDEAYVMASV---DNPHVCRLLGICL 45 usage_00115.pdb 1 --------TVKIPVAIKILN---------ANVEFMDEALIMASM---DHPHLVRLLGVCL 40 usage_00116.pdb 1 --------TVKIPVAIKIL----------ANVEFMDEALIMASM---DHPHLVRLLGVCL 39 usage_00207.pdb 1 --------KVKIPVAIKELRE---ATSPKANKEILDEAYVMASV---DNPHVCRLLGICL 46 usage_00234.pdb 1 GLWIPEGEKVKIPVAIKELRE---ATSPKANKEILDEAYVMASVDNPGNPHVCRLLGICL 57 usage_00303.pdb 1 --------KVKIPVAIKELRE---ATSPKANKEILDEAYVMASV---DNPHVCRLLGICL 46 usage_00392.pdb 1 --------SIKIPVCIKVIEDKQSFQAV------TDHMLAIGSL---DHAHIVRLLGLCP 43 usage_00471.pdb 1 GLWIPEGEKVKIPVAIKELRE---ATSPKANKEILDEAYVMASV---DNPHVCRLLGICL 54 usage_00586.pdb 1 ---------VKIPVAIKELRT---S--PKANKEILDEAYVMASV---DNPHVCRLLGICL 43 vKIPVaIK l Dea maS d pH RLLG Cl usage_00035.pdb 46 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 95 usage_00115.pdb 41 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 90 usage_00116.pdb 40 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 89 usage_00207.pdb 47 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 96 usage_00234.pdb 58 TSTVQLITQLMPFGCLLDYVREHKDN------------------------ 83 usage_00303.pdb 47 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 96 usage_00392.pdb 44 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 93 usage_00471.pdb 55 TSTVQLITQLMPFGCLLDYVREHKDN------------------------ 80 usage_00586.pdb 44 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED-- 91 t QL tQlmP GcLL yV eHkdn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################