################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:29 2021 # Report_file: c_1011_27.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00104.pdb # 2: usage_00244.pdb # 3: usage_00245.pdb # 4: usage_00508.pdb # 5: usage_00509.pdb # 6: usage_00510.pdb # # Length: 62 # Identity: 31/ 62 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 62 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 62 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 VLCAYIMKPKAGYGYVATAAHFAAESSTGTN---------T-RGVDALVYEVDEARELTK 50 usage_00244.pdb 1 ILVAYTMEPAAGVGYLEAAAHIAAESSTG---------EFT-KGVDALVYFIDEAKGIMK 50 usage_00245.pdb 1 ILVAYTMEPAAGVGYLEAAAHIAAESSTG----------FT-KGVDALVYFIDEAKGIMK 49 usage_00508.pdb 1 VLCAYIMKPKAGYGYVATAAHFAAESSTG------------TRGVDALVYEVDEARELTK 48 usage_00509.pdb 1 VLCAYIMKPKAGYGYVATAAHFAAESSTG-----------T-RGVDALVYEVDEARELTK 48 usage_00510.pdb 1 VLCAYIMKPKAGYGYVATAAHFAAESSTGTNVEVCTTDDFT-RGVDALVYEVDEARELTK 59 L AY M P AG GY AAH AAESSTG GVDALVY DEA K usage_00104.pdb 51 IA 52 usage_00244.pdb 51 VA 52 usage_00245.pdb 50 VA 51 usage_00508.pdb 49 IA 50 usage_00509.pdb 49 IA 50 usage_00510.pdb 60 IA 61 A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################