################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:32 2021 # Report_file: c_0736_48.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00121.pdb # 2: usage_00381.pdb # 3: usage_00422.pdb # 4: usage_00436.pdb # 5: usage_00527.pdb # 6: usage_00601.pdb # 7: usage_00602.pdb # 8: usage_00603.pdb # # Length: 54 # Identity: 2/ 54 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 54 ( 3.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 54 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00121.pdb 1 N-E-IDAQP----GGYHVLTLRQLALKDSGTIYFEA--G-D-Q-RASAA----- 38 usage_00381.pdb 1 --K-VVQ-K----GRIHKLVIANALTEDEGDYVFAPDAY-N-V-TLPAKVHVI- 42 usage_00422.pdb 1 --SAERT-G----ESVSTLTIQRTQQEDSAVYLCAS--SQTQLWETQYFGP--- 42 usage_00436.pdb 1 --G-IVL-K----DGNRNLTIRRVRKEDEGLYTCQA--C-C-A-KVEAFFIIEG 41 usage_00527.pdb 1 --N-AEV-VFFENGLRHLLLLKNLRPQDSCRVTFLA--G-D-M-VTSAFLTVR- 44 usage_00601.pdb 1 --K-IVV-Q----GKLHQLIIMNTSTEDSAEYTFVC--G-N-D-QVSATLTVTP 41 usage_00602.pdb 1 --Q-MRT-K----KLTHSLNIRNVHFGDAADYTFVA--G-K-A-TSTATLYVVE 41 usage_00603.pdb 1 KFK-IVV-Q----GKLHQLIIMNTSTEDSAEYTFVC--G-N-D-QVS------- 36 L D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################