################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:56 2021 # Report_file: c_0435_27.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00016.pdb # 2: usage_00428.pdb # 3: usage_00429.pdb # 4: usage_00430.pdb # 5: usage_00481.pdb # 6: usage_00502.pdb # 7: usage_00532.pdb # 8: usage_00533.pdb # 9: usage_00550.pdb # 10: usage_00551.pdb # 11: usage_00705.pdb # 12: usage_00706.pdb # 13: usage_00707.pdb # # Length: 92 # Identity: 30/ 92 ( 32.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/ 92 ( 83.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 92 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 --VVFKGRHRAAHDLEVAVKCINKKNLAKSQTLLGKEIKILKELKHENIVALYDFQEMAN 58 usage_00428.pdb 1 -AKVKLACHILTG-EMVAIKIMDKNTL--DLPRIKTEIEALKNLRHQHICQLYHVLETAN 56 usage_00429.pdb 1 --KVKLACHILTG-EMVAIKIMDKNT---LLPRIKTEIEALKNLRHQHICQLYHVLETAN 54 usage_00430.pdb 1 -AKVKLACHILTG-EMVAIKIMDKNT---LLPRIKTEIEALKNLRHQHICQLYHVLETAN 55 usage_00481.pdb 1 -AKVKLACHVLTG-EMVAIKIMDKNALGSDLPRVKTEIDALKSLRHQHICQLYHVLETKN 58 usage_00502.pdb 1 FAKVKLACHILTG-EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 59 usage_00532.pdb 1 -AKVKLACHILTG-EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 58 usage_00533.pdb 1 FAKVKLACHILTG-EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 59 usage_00550.pdb 1 -AKVKLACHILTG-EMVAIKIMDKNT---L--RIKTEIEALKNLRHQHICQLYHVLETAN 53 usage_00551.pdb 1 -AKVKLACHILTG-EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 58 usage_00705.pdb 1 --KVKLACHILTG-EMVAIKIMDKNT---DLPRIKTEIEALKNLRHQHICQLYHVLETAN 54 usage_00706.pdb 1 --KVKLACHILTG-EMVAIKIMDK-S---DLPRIKTEIEALKNLRHQHICQLYHVLETAN 53 usage_00707.pdb 1 FAKVKLACHILTG-EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 59 kVklacH ltg emVAiKimdK r ktEI aLK LrHqhIcqLYhvlEtaN usage_00016.pdb 59 SVYLVMEYCNGGDLADYLHAMRTLSEDTIRLF 90 usage_00428.pdb 57 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 88 usage_00429.pdb 55 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 86 usage_00430.pdb 56 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 87 usage_00481.pdb 59 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 90 usage_00502.pdb 60 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 91 usage_00532.pdb 59 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 90 usage_00533.pdb 60 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 91 usage_00550.pdb 54 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 85 usage_00551.pdb 59 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 90 usage_00705.pdb 55 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 86 usage_00706.pdb 54 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 85 usage_00707.pdb 60 KIFMVLEYCPGGELFDYIISQDRLSEEETRVV 91 kifmVlEYCpGGeLfDYiisqdrLSEeetRvv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################