################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:34 2021 # Report_file: c_0700_41.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00498.pdb # 8: usage_00499.pdb # 9: usage_00601.pdb # 10: usage_00604.pdb # 11: usage_00712.pdb # 12: usage_00713.pdb # 13: usage_00715.pdb # 14: usage_00717.pdb # # Length: 64 # Identity: 15/ 64 ( 23.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 64 ( 81.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 64 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00015.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00016.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00017.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00018.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00019.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00498.pdb 1 WFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFL-NGSLFLEE 59 usage_00499.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00601.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00604.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00712.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00713.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00715.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 usage_00717.pdb 1 LYTT--SRDRLTSVASY-VYN---GYSVVFVGTKSGKLKKIRADGP-----PHGGVQYEM 49 lytt sRdRLTsvAsy vyn gysVVFvGtksGklkKirAdgp hGgvqyEm usage_00014.pdb 50 VSVF 53 usage_00015.pdb 50 VSVF 53 usage_00016.pdb 50 VSVF 53 usage_00017.pdb 50 VSVF 53 usage_00018.pdb 50 VSVF 53 usage_00019.pdb 50 VSVF 53 usage_00498.pdb 60 MNVY 63 usage_00499.pdb 50 VSVF 53 usage_00601.pdb 50 VSVF 53 usage_00604.pdb 50 VSVF 53 usage_00712.pdb 50 VSVF 53 usage_00713.pdb 50 VSVF 53 usage_00715.pdb 50 VSVF 53 usage_00717.pdb 50 VSVF 53 vsVf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################