################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 09:44:08 2021 # Report_file: c_1430_62.html ################################################################################################ #==================================== # Aligned_structures: 68 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00009.pdb # 8: usage_00010.pdb # 9: usage_00011.pdb # 10: usage_00013.pdb # 11: usage_00014.pdb # 12: usage_00015.pdb # 13: usage_00016.pdb # 14: usage_00018.pdb # 15: usage_00019.pdb # 16: usage_00074.pdb # 17: usage_00076.pdb # 18: usage_00077.pdb # 19: usage_00078.pdb # 20: usage_00079.pdb # 21: usage_00080.pdb # 22: usage_00082.pdb # 23: usage_00083.pdb # 24: usage_00084.pdb # 25: usage_00085.pdb # 26: usage_00086.pdb # 27: usage_00087.pdb # 28: usage_00088.pdb # 29: usage_00089.pdb # 30: usage_00090.pdb # 31: usage_00091.pdb # 32: usage_00092.pdb # 33: usage_00093.pdb # 34: usage_00094.pdb # 35: usage_00096.pdb # 36: usage_00098.pdb # 37: usage_00100.pdb # 38: usage_00138.pdb # 39: usage_00139.pdb # 40: usage_00140.pdb # 41: usage_00236.pdb # 42: usage_00238.pdb # 43: usage_00239.pdb # 44: usage_00240.pdb # 45: usage_00241.pdb # 46: usage_00242.pdb # 47: usage_00243.pdb # 48: usage_00244.pdb # 49: usage_00245.pdb # 50: usage_00561.pdb # 51: usage_00586.pdb # 52: usage_00745.pdb # 53: usage_00746.pdb # 54: usage_00747.pdb # 55: usage_00871.pdb # 56: usage_00873.pdb # 57: usage_00874.pdb # 58: usage_00877.pdb # 59: usage_00879.pdb # 60: usage_00881.pdb # 61: usage_00959.pdb # 62: usage_00970.pdb # 63: usage_00971.pdb # 64: usage_00972.pdb # 65: usage_00973.pdb # 66: usage_01118.pdb # 67: usage_01119.pdb # 68: usage_01120.pdb # # Length: 46 # Identity: 25/ 46 ( 54.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 46 ( 63.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 46 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 LSAVRAARVSFDM---K---DE--ERDRHLIEYLMKHGHETPFEHI 38 usage_00003.pdb 1 LSAVRAARV---SFD-M-G-DE--ERDRHLIEYLMKHGHETPFEHI 38 usage_00004.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00005.pdb 1 LSAVRAARV---SFDLK---DE--ERDRHLIEYLMKHGHETPFEHI 38 usage_00006.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00007.pdb 1 LSAVRAARV---SFD-M----E--ERDRHLIEYLMKHGHETPFEHI 36 usage_00009.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00010.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00011.pdb 1 LSAVRAARV---SFD-M----E--ERDRHLIEYLMKHGHETPFEHI 36 usage_00013.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00014.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00015.pdb 1 LSAVRAARVSFDM---K---DE--ERDRHLIEYLMKHGAETPFEHI 38 usage_00016.pdb 1 LSAVRAARV---SFD-M---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00018.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00019.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00074.pdb 1 LSAVRAARVSFDM------G----ERDRHLIEYLMKHGHETPFEHI 36 usage_00076.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00077.pdb 1 LSAVRAARVS---FD-MGL-DE--ERDRHLIEYLMKHGHETPFEHI 39 usage_00078.pdb 1 LSAVRAARVSFDM-------DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00079.pdb 1 LSAVRAARVSFDM-------DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00080.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00082.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00083.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00084.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00085.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00086.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00087.pdb 1 LSAVRAARVSFDM---------GLERDRHLIEYLMKHGHETPFEHI 37 usage_00088.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00089.pdb 1 LSAVRAARVSFDM-------DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00090.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00091.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00092.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00093.pdb 1 LSAVRAARVSFDM-------DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00094.pdb 1 LSAVRAARVSFDM-------DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00096.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00098.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00100.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00138.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00139.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00140.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00236.pdb 1 LSAVRAARV---SFD-M---DE--ERDRHLIEYLMKHGDETPFEHI 37 usage_00238.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGDETPFEHI 37 usage_00239.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGDETPFEHI 36 usage_00240.pdb 1 LSAVRAARVSFD--------DE--ERDRHLIEYLMKHGDETPFEHI 36 usage_00241.pdb 1 LSAVRAARVSFD--------DE--ERDRHLIEYLMKHGDETPFEHI 36 usage_00242.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGDETPFEHI 37 usage_00243.pdb 1 LSAVRAARV---SFD-K---DE--ERDRHLIEYLMKHGDETPFEHI 37 usage_00244.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00245.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00561.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLKHGHE-TPFEHI 35 usage_00586.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00745.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00746.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00747.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00871.pdb 1 LSAVRAARV---SFDLK---DE--ERDRHLIEYLMKHGHETPFEHI 38 usage_00873.pdb 1 LSAVRAARVSFDM-G-K---DE--ERDRHLIEYLMKHGHETPFEHI 39 usage_00874.pdb 1 LSAVRAARVSF---L-K---DE--ERDRHLIEYLMKHGHETPFEHI 37 usage_00877.pdb 1 LSAVRAARVSFDM-L-K---DE--ERDRHLIEYLMKHGHETPFEHI 39 usage_00879.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00881.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00959.pdb 1 LSAVRAARVSFDM------G-E--ERDRHLIEYLMKHGHETPFEHI 37 usage_00970.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00971.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_00972.pdb 1 LSAVRAARV---SF--K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_00973.pdb 1 LSAVRAARVSF-----K---DE--ERDRHLIEYLMKHGHETPFEHI 36 usage_01118.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_01119.pdb 1 LSAVRAARVSFDMGL-K---DE--ERDRHLIEYLMKHGHETPFEHI 40 usage_01120.pdb 1 LSAVRAARV---SFD-----DE--ERDRHLIEYLMKHGHETPFEHI 36 LSAVRAARV ERDRHLIEYLmkhg TPFEHI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################