################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:15 2021 # Report_file: c_0924_30.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00111.pdb # 3: usage_00112.pdb # 4: usage_00186.pdb # 5: usage_00192.pdb # 6: usage_00241.pdb # 7: usage_00243.pdb # 8: usage_00244.pdb # 9: usage_00246.pdb # # Length: 33 # Identity: 6/ 33 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 33 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 33 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -GVFEVHKKNVRGEFTYYEIQDNTGKMEVVVH- 31 usage_00111.pdb 1 -GVFAVEKKKVNDKSITFKIKDNEDNIKVVWDK 32 usage_00112.pdb 1 -GVFAVEKKKVNDKSITFKIKDNEDNIKVVWDK 32 usage_00186.pdb 1 -GVFMLHKKTVNQKTTIYEIQDDRGKMDVVGT- 31 usage_00192.pdb 1 -GVFEVHKKNVRGEFTYYEIQDNTGKMEVVVHG 32 usage_00241.pdb 1 G--VFLHKKTVNQKTTIYEIQDDRGKDVVGTG- 30 usage_00243.pdb 1 G--VFLHKKTVNQKTTIYEIQDDRGKDVVGT-- 29 usage_00244.pdb 1 G--VFLHKKTVNQKTTIYEIQDDRGKDVVGT-- 29 usage_00246.pdb 1 G--VFLHKKTVNQKTTIYEIQDDRGKDVVGT-- 29 KK V I D V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################