################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:55 2021 # Report_file: c_1089_18.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00306.pdb # 2: usage_00307.pdb # 3: usage_00308.pdb # 4: usage_00912.pdb # 5: usage_00913.pdb # 6: usage_00914.pdb # 7: usage_00915.pdb # 8: usage_00916.pdb # 9: usage_00917.pdb # 10: usage_00918.pdb # 11: usage_00919.pdb # 12: usage_00920.pdb # 13: usage_00921.pdb # 14: usage_01288.pdb # 15: usage_01442.pdb # 16: usage_01684.pdb # 17: usage_01688.pdb # 18: usage_01689.pdb # 19: usage_01690.pdb # # Length: 72 # Identity: 7/ 72 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 72 ( 20.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 72 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00306.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDK--DIVLA 55 usage_00307.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00308.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00912.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00913.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00914.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00915.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00916.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00917.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00918.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00919.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00920.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_00921.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_01288.pdb 1 NDYHAVGIGA-TTFEELNKIYEITAKVNEILKEAFKKQNINLIDFKLEFGRYNGEILLAD 59 usage_01442.pdb 1 --FAAVVG-L-VGAVRANQLRDETIKIYTRAAAHALHKGIILADTKFEFGVDIEGNLVLA 56 usage_01684.pdb 1 --VDHLEILGIATKKQAEK-KEAAVKITLALKEFFERANFELWDIKYEFGLDKDGNVVLG 57 usage_01688.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_01689.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 usage_01690.pdb 1 --YYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLA 57 k e K lk i L D K EFG d vl usage_00306.pdb 56 DEISPDTCRFWD 67 usage_00307.pdb ------------ usage_00308.pdb 58 DE---------- 59 usage_00912.pdb 58 DEISPDTCRFWD 69 usage_00913.pdb 58 DEISPDTCRFWD 69 usage_00914.pdb 58 DEISPDTCRFWD 69 usage_00915.pdb 58 DEISPDTCRFWD 69 usage_00916.pdb 58 DEISPDTCRFWD 69 usage_00917.pdb 58 DEISPDTCRFWD 69 usage_00918.pdb 58 DEISPDTCRFWD 69 usage_00919.pdb 58 DEISPDTCRFWD 69 usage_00920.pdb 58 DEISPDTCRFWD 69 usage_00921.pdb 58 DEISPDTCRFWD 69 usage_01288.pdb 60 EISPDT-CRFWD 70 usage_01442.pdb 57 DE---------- 58 usage_01684.pdb 58 DEISPDTFRLRK 69 usage_01688.pdb ------------ usage_01689.pdb 58 DEISPDTCRFWD 69 usage_01690.pdb 58 DEISPDTCRFWD 69 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################