################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:53 2021 # Report_file: c_0653_39.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00302.pdb # 2: usage_00303.pdb # 3: usage_00566.pdb # 4: usage_00680.pdb # 5: usage_00857.pdb # 6: usage_00860.pdb # 7: usage_00920.pdb # 8: usage_00921.pdb # 9: usage_01137.pdb # # Length: 81 # Identity: 48/ 81 ( 59.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 81 ( 63.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 81 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 VKWESSTEKMYVRDGVLKGDVNMALLLQGGGHYRCDFRTTYKAKKVVQLPDYHFVDHLME 60 usage_00303.pdb 1 VKWESSTEKMYVRDGVLKGDVNMALLLQGGGHYRCDFRTTYKAKKVVQLPDYHFVDHLME 60 usage_00566.pdb 1 LKWEPSTEKLHVRDGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVVQLPDAHFVDHRIE 60 usage_00680.pdb 1 VKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDYHFVDHHIE 60 usage_00857.pdb 1 -----STEKLYVRDGVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVVQLPDYHSVDHHIE 55 usage_00860.pdb 1 -----STEKLYVRDGVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVVQLPDYHSVDHHIE 55 usage_00920.pdb 1 VKWEPSTEKLYVRDGVLKGDVNMALLLEGGGHYRCDFKTTYKAKKVVQLPDYHFVDHRIE 60 usage_00921.pdb 1 VKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDYHFVDHHIE 60 usage_01137.pdb 1 LKWEPSTEKLHVRDGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVVQLPDYHFVDHRIE 60 STEK VRDG L N AL L GGGHY CDF TTYKAKKVVQLPDyH VDH E usage_00302.pdb 61 ITSHDKDYNKVKLYEHAKA-- 79 usage_00303.pdb 61 ITSHDKDYNKVKLYEHAKA-- 79 usage_00566.pdb 61 ILGNDSDYNKVKLYEHAVA-- 79 usage_00680.pdb 61 IKSHDKDYSNVNLHEHAEAHS 81 usage_00857.pdb 56 IKSHDKDYSNVNLHEHAEAHS 76 usage_00860.pdb 56 IKSHDKDYSNVNLHEHAEAHS 76 usage_00920.pdb 61 IKSHDKDYNNVNLHEHAEAH- 80 usage_00921.pdb 61 IKSHDKDYSNVNLHEHAEAHS 81 usage_01137.pdb 61 ILSNDSDYNKVKLYEHGVA-- 79 I s D DY V L EHa A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################