################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:21 2021 # Report_file: c_1462_10.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00133.pdb # 2: usage_00192.pdb # 3: usage_00261.pdb # 4: usage_00338.pdb # 5: usage_00835.pdb # 6: usage_00955.pdb # 7: usage_01501.pdb # 8: usage_01502.pdb # 9: usage_01504.pdb # 10: usage_01532.pdb # 11: usage_01739.pdb # 12: usage_01802.pdb # 13: usage_01860.pdb # 14: usage_01930.pdb # 15: usage_02023.pdb # 16: usage_02024.pdb # 17: usage_02031.pdb # 18: usage_02178.pdb # 19: usage_02446.pdb # 20: usage_02450.pdb # 21: usage_02496.pdb # # Length: 34 # Identity: 20/ 34 ( 58.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 34 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 34 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 APLILVTYFTQPQPKAESRRDVLASAAKIVTD-- 32 usage_00192.pdb 1 APLVLVTYFTQPEQKAERRRDILAAAAKI----- 29 usage_00261.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_00338.pdb 1 APLILVTYFTQPQPKAESRRDVLASAAKIVTD-- 32 usage_00835.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_00955.pdb 1 APLVLVTYFTQPEQKAENRNDILAAAAKIVTH-- 32 usage_01501.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_01502.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIA--- 31 usage_01504.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_01532.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIA--- 31 usage_01739.pdb 1 APLILVTYFTQPQPKAESRRDVLASAAKIVTD-- 32 usage_01802.pdb 1 APLVLVTYFTQPEQKAENRNDILAAAAKIVTH-- 32 usage_01860.pdb 1 APLILVTYFTQPQPKAESRRDVLASAAKIVTD-- 32 usage_01930.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_02023.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_02024.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_02031.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 usage_02178.pdb 1 APLILVTYFTQPQPKAESRRDVLASAAKI----- 29 usage_02446.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARII---- 30 usage_02450.pdb 1 APLVLVTYFTQPQQNAESRADVLASAARII---- 30 usage_02496.pdb 1 APLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 34 APL LVTYFTQP AE R D LA AA I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################