################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:59 2021 # Report_file: c_0083_28.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00439.pdb # 2: usage_00440.pdb # 3: usage_00441.pdb # # Length: 337 # Identity: 144/337 ( 42.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 145/337 ( 43.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 192/337 ( 57.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00439.pdb 1 PETLPQNPELAHLIQVIIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRA 60 usage_00440.pdb ------------------------------------------------------------ usage_00441.pdb 1 PETLPQNPELAHLIQVIIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRA 60 usage_00439.pdb 61 GCKLLLQVSDAKALAKTPLENILPFLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIA 120 usage_00440.pdb 1 ------------------LENILPFLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIA 42 usage_00441.pdb 61 GCKLLLQVSDAKALAKTPLENILPFLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIA 120 LENILPFLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIA usage_00439.pdb 121 IRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFL--WIPTPNGETKTA 178 usage_00440.pdb 43 IRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFL--WIPTP---TKTA 97 usage_00441.pdb 121 IRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFLMMWIPTP-NGTKTA 179 IRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFL WIPTP TKTA usage_00439.pdb 179 GPNEKQQVCKFIEIDILKKLS-CLSCE--DTPGLLELRSTILRSFILLLRT--------- 226 usage_00440.pdb 98 GPNEKQQVCKFIEIDILKKLS-CLSCE--DTPGLLELRSTILRSFILLLRTPFVPKDGVL 154 usage_00441.pdb 180 GPNEKQQVCKFIEIDILKKLMSCLSCEGMDTPGLLELRSTILRSFILLLRT--------- 230 GPNEKQQVCKFIEIDILKKLs CLSCE DTPGLLELRSTILRSFILLLRT usage_00439.pdb ------------------------------------------------------------ usage_00440.pdb 155 NVIDENRKENLIGHICAAYSWVFRQPNNTRTQSTKQQLVERTISLLLVLEQCGAEKEVAQ 214 usage_00441.pdb ------------------------------------------------------------ usage_00439.pdb ------------------------------------- usage_00440.pdb 215 YSYSIDCPLNLLNGNQVKPTFIHNVLVVCDKILEHCP 251 usage_00441.pdb ------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################