################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:39 2021 # Report_file: c_1396_45.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00122.pdb # 2: usage_01171.pdb # 3: usage_01173.pdb # 4: usage_01175.pdb # # Length: 168 # Identity: 6/168 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/168 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 106/168 ( 63.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 RSRTKKFISAIWLAS------------------ALLAIPMLFTMGLQNRSADGTHPGGLV 42 usage_01171.pdb 1 ---------------DTATLKVVIQLNTFMSFLFPMLVASIL------------------ 27 usage_01173.pdb 1 ---------------------------------FPMLVASIL------------------ 9 usage_01175.pdb 1 ---------------------------------FPMLVASIL------------------ 9 fpmlvasil usage_00122.pdb 43 CTPIVDTATVKVVIQVN-TFMS------------FLFPMLVISILNTVIANKLTVMVPG- 88 usage_01171.pdb 28 -----NTVIARRLTVMV-------RVQALRRGVLVLRAMVIAFVVCWLPYHVRRLMF--V 73 usage_01173.pdb 10 -----NTVAARRLTVMVE----PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMF--V 58 usage_01175.pdb 10 -----NTVAARRLTVMV-HQAAPGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMF--V 61 nTv arrltvmv vLra viafvvcwlpyhvrrlMf usage_00122.pdb 89 -------------RVQALRHGVLVLRAVVIAFVVCWL----------- 112 usage_01171.pdb 74 YISDEQWTTALFDFYHYFYMLSNALVYVSAA------INPILYNLVSA 115 usage_01173.pdb 59 YISDEQWTTALFDFYHYFYMLSNALVYVSAA----------------- 89 usage_01175.pdb 62 YISDEQWTTALFDFYHYFYMLSNALVYVSAA----------------- 92 fyhyfymlsnaLvyVsaA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################