################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:44 2021 # Report_file: c_0145_30.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00079.pdb # 4: usage_00115.pdb # 5: usage_00202.pdb # 6: usage_00203.pdb # 7: usage_00261.pdb # 8: usage_00262.pdb # 9: usage_00278.pdb # 10: usage_00279.pdb # 11: usage_00280.pdb # 12: usage_00443.pdb # 13: usage_00494.pdb # 14: usage_00495.pdb # 15: usage_00529.pdb # # Length: 129 # Identity: 44/129 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/129 ( 42.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/129 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 -VKLLESGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00061.pdb 1 -VKLLESGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00079.pdb 1 -VKLQESGGEVVRPGTSVKVSCKASGYAFTN--YLIEWVKQRPGQGLEWIGVINPGSGDT 57 usage_00115.pdb 1 -VQLQQSGNELAKPGASMKMSCRASGYSFTS--YWIHWLKQRPDQGLEWIGYIDPATAYT 57 usage_00202.pdb 1 ---LQQSGPVLVKPGGSVKMSCKASEYTLTS--YLFQWVKQKSGQGLEWIGYIYPYNGGT 55 usage_00203.pdb 1 -VQLQQSGPVLVKPGGSVKMSCKASEYTLTS--YLFQWVKQKSGQGLEWIGYIYPYNGGT 57 usage_00261.pdb 1 -VQLQQSGPEDVKPGASVKISCKASGYSLTTKGMGVNWVKQSPGKGLEWLAHIYW-DDDK 58 usage_00262.pdb 1 QVQLQQSGPEDVKPGASVKISCKASGYSLTTKGMGVNWVKQSPGKGLEWLAHIYW-DDDK 59 usage_00278.pdb 1 -VKLLESGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00279.pdb 1 --KLLESGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 56 usage_00280.pdb 1 -VKLLESGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00443.pdb 1 -VQLQQSGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 usage_00494.pdb 1 -VKLEESGPELVKPGASMKMSCKASGYTFTS--YIIHWLKQKPGQGLEWIGYINPYNDGS 57 usage_00495.pdb 1 -VKLEESGPELVKPGASMKMSCKASGYTFTS--YIIHWLKQKPGQGLEWIGYINPYNDGS 57 usage_00529.pdb 1 -VQLQQSGPELVKPGASVKMSCKASGYTFTS--YVMHWVKQKPGQGLEWIGYINPYNDGT 57 L SG vkPG S K SCkAS Y T W KQ g GLEW I usage_00060.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCVRGGYR-P-------YYAMDYW 109 usage_00061.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCVRGGYR-P-------YYAMDYW 109 usage_00079.pdb 58 NYNEKFKGKATLTADKSSSTAYMQLNSLTSDDSAVYFCARSGA------AAPTYYAMDYW 111 usage_00115.pdb 58 ESNQKFKDKAILTADRSSNTAFMYLNSLTSEDSAVYYCARESPRLRRGIY---YYAMDYW 114 usage_00202.pdb 56 RYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSS-MSD---------PGANW 105 usage_00203.pdb 58 RYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSS-MSD---------PGANW 107 usage_00261.pdb 59 RYNPSLKSRATLTVDKSSSTVYLELRSLTSEDSSVYYCARRGGSSH-------YYAMDYW 111 usage_00262.pdb 60 RYNPSLKSRATLTVDKSSSTVYLELRSLTSEDSSVYYCARRGGSSH-------YYAMDYW 112 usage_00278.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCVRGGYR-P-------YYAMDYW 109 usage_00279.pdb 57 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCVRGGYR-P-------YYAMDYW 108 usage_00280.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCVRGGYR-P-------YYAMDYW 109 usage_00443.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYK-R-------GYAMDYW 109 usage_00494.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLASEDSAVYYCTRNY-GSD---------SLDYW 107 usage_00495.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLASEDSAVYYCTRNY-GSD---------SLDYW 107 usage_00529.pdb 58 KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYK-R-------GYAMDYW 109 yN AtLT DkSS T y L SL SeDS VYyC R W usage_00060.pdb 110 GQGTSVTVS 118 usage_00061.pdb 110 GQGTSVTVS 118 usage_00079.pdb 112 GQGVSVTVS 120 usage_00115.pdb 115 GQGTTVTVS 123 usage_00202.pdb 106 GPGTLVTVS 114 usage_00203.pdb 108 GPGTLVTVS 116 usage_00261.pdb 112 GQGTTVTV- 119 usage_00262.pdb 113 GQGTTVTVS 121 usage_00278.pdb 110 GQGTSVTVS 118 usage_00279.pdb 109 GQGTSVTV- 116 usage_00280.pdb 110 GQGTSVTVS 118 usage_00443.pdb 110 GQGTSVTVS 118 usage_00494.pdb 108 GQGTTLTVS 116 usage_00495.pdb 108 GQGTTLTVS 116 usage_00529.pdb 110 GQGTSVTV- 117 G Gt TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################