################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:30 2021 # Report_file: c_0707_69.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00153.pdb # 2: usage_00154.pdb # 3: usage_00155.pdb # 4: usage_00156.pdb # 5: usage_00216.pdb # 6: usage_00704.pdb # 7: usage_00705.pdb # 8: usage_00707.pdb # 9: usage_00709.pdb # 10: usage_00868.pdb # 11: usage_00870.pdb # # Length: 86 # Identity: 3/ 86 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 86 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 86 ( 58.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00153.pdb 1 GRTEVSFTLNE-DLANIHDIGGKPASVSAPREHPFVLQSVGGQ----------------T 43 usage_00154.pdb 1 GRTEVSFTLNE-DLANIHDIGGKPASVSAPREHPFVLQSVGGQ----------------T 43 usage_00155.pdb 1 GRTEVSFTLNE-DLANIHDIGGKPASVSAPREHPFVLQSVGGQ----------------T 43 usage_00156.pdb 1 GRTEVSFTLNE-DLANIHDIGGKPASVSAPREHPFVLQSVGGQ----------------T 43 usage_00216.pdb 1 -GIINVPVAVGA---------------------TSGSAAIPNPGNLTYRVRSLFGDPASS 38 usage_00704.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 usage_00705.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 usage_00707.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 usage_00709.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 usage_00868.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 usage_00870.pdb 1 GRTEVSFTLNE-DLAN---------------EHPFVLQSVGGQ----------------T 28 rtevsftlne pfvlqsvggq t usage_00153.pdb 44 LTVFTESSSDKLSLEGIVVQRAECRP 69 usage_00154.pdb 44 LTVFTESSSDKLSLEGIVVQRAECRP 69 usage_00155.pdb 44 LTVFTESSSDKLSLEGIVVQRAECRP 69 usage_00156.pdb 44 LTVFTESSSDKLSLEGIVVQRAECRP 69 usage_00216.pdb 39 GDKVSVS----------GVTINVTRP 54 usage_00704.pdb 29 LTVFTESSSDKLSLEGIVVQRAECR- 53 usage_00705.pdb 29 LTVFTESSSDKLSLEGIVVQRAECRP 54 usage_00707.pdb 29 LTVFTESSSDKLSLEGIVVQRAECRP 54 usage_00709.pdb 29 LTVFTESSSDKLSLEGIVVQRAECRP 54 usage_00868.pdb 29 LTVFTESSSDKLSLEGIVVQRAECR- 53 usage_00870.pdb 29 LTVFTESSSDKLSLEGIVVQRAECRP 54 ltvfteS vVqraecR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################