################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:59 2021 # Report_file: c_1253_94.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00210.pdb # 2: usage_00211.pdb # 3: usage_00212.pdb # 4: usage_00213.pdb # 5: usage_00305.pdb # 6: usage_00306.pdb # 7: usage_00715.pdb # 8: usage_00724.pdb # 9: usage_00725.pdb # 10: usage_01315.pdb # 11: usage_01399.pdb # # Length: 33 # Identity: 6/ 33 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 33 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 33 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00210.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLIA- 28 usage_00211.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLI-- 27 usage_00212.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLIA- 28 usage_00213.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLIA- 28 usage_00305.pdb 1 GVLITGEANIGKSELSLALIDRGH----QLVC- 28 usage_00306.pdb 1 GVLITGEANIGKSELSLALIDRGH----QLV-- 27 usage_00715.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLIA- 28 usage_00724.pdb 1 GVLITGDSGIGKSETALELIKRGH----RLV-- 27 usage_00725.pdb 1 GVLITGDSGIGKSETALELIKRGH----RLV-- 27 usage_01315.pdb 1 GVLITGDSGVGKSETALELVQRGH----RLI-- 27 usage_01399.pdb 1 HLAILAATGSGKSNTVAVLSQRISELGGSVLIF 33 gvlItg GKSe l L Rgh l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################