################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:36 2021 # Report_file: c_1386_88.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00116.pdb # 2: usage_00117.pdb # 3: usage_00221.pdb # 4: usage_00466.pdb # 5: usage_00467.pdb # 6: usage_00769.pdb # 7: usage_00770.pdb # 8: usage_01164.pdb # 9: usage_01165.pdb # 10: usage_01301.pdb # # Length: 66 # Identity: 2/ 66 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 66 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 66 ( 53.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_00117.pdb 1 ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_00221.pdb 1 ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_00466.pdb 1 WKACIAELIWFLSGSTNVNDLRLIQH---DSLIQGKTV-WDENY--ENQAKDL------- 47 usage_00467.pdb 1 ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_00769.pdb 1 ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_00770.pdb 1 ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_01164.pdb 1 ------IKK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 usage_01165.pdb 1 -------KK-------VLLEMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 44 usage_01301.pdb 1 ------IKK-------VLLDMRKFRMGLIQTADQL--RFSYLAVIEGAKFIMGDSSVQDQ 45 kk vll mRkfrm qtadQl r sylav gakfimg usage_00116.pdb 46 WKELS- 50 usage_00117.pdb 46 WKELS- 50 usage_00221.pdb 46 WKELS- 50 usage_00466.pdb 48 ----G- 48 usage_00467.pdb 46 WKELSH 51 usage_00769.pdb 46 WKELSH 51 usage_00770.pdb 46 WKELS- 50 usage_01164.pdb 46 WKEL-- 49 usage_01165.pdb 45 WKELS- 49 usage_01301.pdb 46 WKELSH 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################