################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:17 2021 # Report_file: c_0611_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00038.pdb # 2: usage_00522.pdb # 3: usage_00523.pdb # 4: usage_00524.pdb # 5: usage_00525.pdb # # Length: 75 # Identity: 23/ 75 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 75 ( 72.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 75 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 TCDFEQQFLGATGGRGVDVVLNSLA--GEFADASLRMLPRGGRFLEL-G--KTDVRDP-V 54 usage_00522.pdb 1 ---FEQHVLWHTGGKGVDLVLN-SLAEE-KLQASVRCLATHGRFLEIGKFD-------LG 48 usage_00523.pdb 1 --SFEQHVLWHTGGKGVDLVLN-SLAEE-KLQASVRCLATHGRFLEIGKFD--L----LG 50 usage_00524.pdb 1 ---FEQHVLWHTGGKGVDLVLN-SLAEE-KLQASVRCLATHGRFLEIGKFD--L----LG 49 usage_00525.pdb 1 ---FEQHVLWHTGGKGVDLVLN-SLAEE-KLQASVRCLATHGRFLEIGK---------LG 46 FEQhvLwhTGGkGVDlVLN sl e klqASvRcLathGRFLEi k g usage_00038.pdb 55 EVADAHPGVSYQA-- 67 usage_00522.pdb 49 MAIFL-KNVTFHG-- 60 usage_00523.pdb 51 MAIFL-KNVTFHG-- 62 usage_00524.pdb 50 MAIFL-KNVTFHGVL 63 usage_00525.pdb 47 MAIFL-KNVTFHG-- 58 maifl knVtfhg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################