################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:27 2021 # Report_file: c_1387_102.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00234.pdb # 2: usage_00235.pdb # 3: usage_00556.pdb # 4: usage_00557.pdb # 5: usage_00834.pdb # 6: usage_00839.pdb # 7: usage_00840.pdb # 8: usage_01048.pdb # 9: usage_01723.pdb # 10: usage_01835.pdb # 11: usage_02436.pdb # 12: usage_02437.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 60 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 60 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 NIREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDIRH-ILLIADVMTR------- 47 usage_00235.pdb 1 NIREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDIRH-ILLIADVMTR------- 47 usage_00556.pdb 1 NIREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDIRH-ILLIADVMTR------- 47 usage_00557.pdb 1 NIREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDIRH-ILLIADVMTR------- 47 usage_00834.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMTR------- 46 usage_00839.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMT-------- 45 usage_00840.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMT-------- 45 usage_01048.pdb 1 FSDIETNF-PANAGIDEIVEAQKPFVAKHN------------ISAGDFIQFAGAVGVSNC 47 usage_01723.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMT-------- 45 usage_01835.pdb 1 -KEKYQQMR---GDALKTEILADFKDKLAEATDEQ---SLKQ-IVAELKSK--------- 43 usage_02436.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMTR------- 46 usage_02437.pdb 1 -IREIEEVF--GIEAAREIIIREISKVLAEQG---LDVDMRH-ILLVADVMTR------- 46 a i lae i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################