################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:01 2021 # Report_file: c_1121_49.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00084.pdb # 2: usage_00154.pdb # 3: usage_00227.pdb # 4: usage_00232.pdb # 5: usage_00507.pdb # # Length: 74 # Identity: 43/ 74 ( 58.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 74 ( 58.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 74 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 TMI------LTQIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEA 54 usage_00154.pdb 1 ---------SQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEP 51 usage_00227.pdb 1 ---------SQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEP 51 usage_00232.pdb 1 ---------------KEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEA 45 usage_00507.pdb 1 ---KPDTMILTQIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEA 57 KEACDWLRA GFPQYAQLYED FPI I VK HDFL D E usage_00084.pdb 55 LCRRLNTLNKCAVM 68 usage_00154.pdb 52 LCRRLNTLNKCAS- 64 usage_00227.pdb 52 LCRRLNTLNKC--- 62 usage_00232.pdb 46 LCRRLNTLNKCAV- 58 usage_00507.pdb 58 LCRRLNTLNKCAVM 71 LCRRLNTLNKC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################