################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:12 2021 # Report_file: c_1481_103.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_01642.pdb # 2: usage_02334.pdb # 3: usage_02335.pdb # 4: usage_02336.pdb # 5: usage_02337.pdb # 6: usage_02338.pdb # 7: usage_02339.pdb # 8: usage_02340.pdb # 9: usage_02341.pdb # 10: usage_02342.pdb # 11: usage_02343.pdb # 12: usage_02344.pdb # 13: usage_02345.pdb # # Length: 34 # Identity: 13/ 34 ( 38.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 34 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 34 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01642.pdb 1 -RETYEMLLKIKESLELMQYLPQHTIETYRQ--- 30 usage_02334.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYR---- 29 usage_02335.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKY----- 28 usage_02336.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQK-- 31 usage_02337.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKY----- 28 usage_02338.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQK-- 31 usage_02339.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQ--- 30 usage_02340.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQ--- 30 usage_02341.pdb 1 GRERYEILKKLNDSLELSDVVPASDAEKYRQKFM 34 usage_02342.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQKF- 32 usage_02343.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYR---- 29 usage_02344.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYRQK-- 31 usage_02345.pdb 1 -RERYEILKKLNDSLELSDVVPASDAEKYR---- 29 RErYEiLkKlndSLELsdvvPasdaEkY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################