################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:53 2021 # Report_file: c_1089_74.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00107.pdb # 2: usage_00539.pdb # 3: usage_00540.pdb # 4: usage_00541.pdb # 5: usage_00542.pdb # 6: usage_00543.pdb # 7: usage_00544.pdb # 8: usage_00545.pdb # 9: usage_00546.pdb # 10: usage_01217.pdb # 11: usage_01218.pdb # 12: usage_01219.pdb # 13: usage_01220.pdb # 14: usage_01221.pdb # 15: usage_01222.pdb # 16: usage_01539.pdb # 17: usage_01751.pdb # 18: usage_01752.pdb # 19: usage_01753.pdb # # Length: 78 # Identity: 55/ 78 ( 70.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 78 ( 70.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 78 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 GELTRLLNSMLTAIKAISSAVRK--AGLA-------------KLDVLSNSLVINMLQSSY 45 usage_00539.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSVNVDQVKKLDVLSNSLVINMLQSSY 60 usage_00540.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAG-----QVKKLDVLSNSLVINMLQSSY 55 usage_00541.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSV---QVKKLDVLSNSLVINMLQSSY 57 usage_00542.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSVNV--VKKLDVLSNSLVINMLQSSY 58 usage_00543.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGS----QVKKLDVLSNSLVINMLQSSY 56 usage_00544.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAG-----QVKKLDVLSNSLVINMLQSSY 55 usage_00545.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGS----QVKKLDVLSNSLVINMLQSSY 56 usage_00546.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAG------VKKLDVLSNSLVINMLQSSY 54 usage_01217.pdb 1 --LTQLLNSMLTAIKAISSAVRK---A-------------VKKLDVLSNSLVINMLQSSY 42 usage_01218.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSV----VKKLDVLSNSLVINMLQSSY 56 usage_01219.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGS-----VKKLDVLSNSLVINMLQSSY 55 usage_01220.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGS-----VKKLDVLSNSLVINMLQSSY 55 usage_01221.pdb 1 GELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGS-----VKKLDVLSNSLVINMLQSSY 55 usage_01222.pdb 1 -ELTQLLNSMLTAIKAISSAVRK---A-------------VKKLDVLSNSLVINMLQSSY 43 usage_01539.pdb 1 GELTRLLNSMLTAIKAISSAVRK--AGLA-------------KLDVLSNSLVINMLQSSY 45 usage_01751.pdb 1 --LTQLLNSMLTAIKAISSAVRK-------------------KLDVLSNSLVINMLQSSY 39 usage_01752.pdb 1 --LTQLLNSMLTAIKAISSAVRK-------------------KLDVLSNSLVINMLQSSY 39 usage_01753.pdb 1 --LTQLLNSMLTAIKAISSAVRK-------------------KLDVLSNSLVINMLQSSY 39 LT LLNSMLTAIKAISSAVRK KLDVLSNSLVINMLQSSY usage_00107.pdb 46 STCVLVSEENKDAIITA- 62 usage_00539.pdb 61 STCVLVSEENKDAIITA- 77 usage_00540.pdb 56 STCVLVSEENKDAIITA- 72 usage_00541.pdb 58 STCVLVSEENKDAIITA- 74 usage_00542.pdb 59 STCVLVSEENKDAIITA- 75 usage_00543.pdb 57 STCVLVSEENKDAIITA- 73 usage_00544.pdb 56 STCVLVSEENKDAIITA- 72 usage_00545.pdb 57 STCVLVSEENKDAIITA- 73 usage_00546.pdb 55 STCVLVSEENKDAIITA- 71 usage_01217.pdb 43 STCVLVSEENKDAIITA- 59 usage_01218.pdb 57 STCVLVSEENKDAIITA- 73 usage_01219.pdb 56 STCVLVSEENKDAIITA- 72 usage_01220.pdb 56 STCVLVSEENKDAIITA- 72 usage_01221.pdb 56 STCVLVSEENKDAIITA- 72 usage_01222.pdb 44 STCVLVSEENKDAIITA- 60 usage_01539.pdb 46 STCVLVSEENKDAIITA- 62 usage_01751.pdb 40 STCVLVSEENKDAIITA- 56 usage_01752.pdb 40 STCVLVSEENKDAIITAK 57 usage_01753.pdb 40 STCVLVSEENKDAIITA- 56 STCVLVSEENKDAIITA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################