################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:15 2021 # Report_file: c_0629_30.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00034.pdb # 2: usage_00042.pdb # 3: usage_00162.pdb # 4: usage_00176.pdb # # Length: 92 # Identity: 2/ 92 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 92 ( 26.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 92 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 SFVEFTILAII--TSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDER 58 usage_00042.pdb 1 TDTDVAVLLKVEI--E--KPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKT--P-- 52 usage_00162.pdb 1 SREEILILLTL--WQK--GSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERP----- 51 usage_00176.pdb 1 SREEILILLTL--WQK--GSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDER 56 s e iLl tlke k r nnL el ker usage_00034.pdb 59 KILIHMDDAQQDHAEQLLAQVNQLL------- 83 usage_00042.pdb 53 KYYYSIS-S---NILEKIRNDLLNCAKRELAA 80 usage_00162.pdb 52 TVIIHFNEKLQQEKVELLNFISDAIASRA--- 80 usage_00176.pdb 57 TVIIHFNEKLQQEKVELLNFISDAIASR---- 84 ih ell #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################