################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:12 2021 # Report_file: c_0577_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00044.pdb # # Length: 94 # Identity: 20/ 94 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 94 ( 58.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 94 ( 41.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-PDAALNQDN--------- 48 usage_00013.pdb 1 -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-PDAALNQDN--------- 48 usage_00017.pdb 1 -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVA-P----------------- 40 usage_00018.pdb 1 -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQLSPVAP--------N--------- 41 usage_00019.pdb 1 -SLTLFHNPAS-PYVRKVVLLHETGQLNRVALQASQ------------------------ 34 usage_00044.pdb 1 QELTIYHIP--GPFSERVEILELKGLR---KDVEIDIS-------------KPRPDWLLA 42 sLTlfHnP PyvrkVvlLhetGql alqasq usage_00012.pdb 49 PLG---KIPALRLDNGQVLYDSRVILDYLDQQH- 78 usage_00013.pdb 49 PLG---KIPALRLDNGQVLYDSRVILDYLDQQH- 78 usage_00017.pdb 41 PLG---KIPALRLDNGQVLYDSRVILDYLDQQH- 70 usage_00018.pdb 42 PLG---KIPALRLDNGQVLYDSRVILDYLDQQH- 71 usage_00019.pdb 35 PLG---KIPALRLDNGQVLYDSRVILDYLD---- 61 usage_00044.pdb 43 KTGGTTALPLLDVENGESLKES-VILRYLEQRYP 75 plG kiPaLrldNGqvLydS VILdYLd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################