################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:29 2021 # Report_file: c_0505_41.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00072.pdb # 4: usage_00178.pdb # 5: usage_00257.pdb # 6: usage_00304.pdb # 7: usage_00305.pdb # 8: usage_00306.pdb # 9: usage_00307.pdb # 10: usage_00308.pdb # 11: usage_00432.pdb # # Length: 77 # Identity: 6/ 77 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 77 ( 11.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 77 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 PLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKG-SVLEAPARRVADYGAAIALLPG 59 usage_00030.pdb 1 PLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKG-SVLEAPARRVADYGAAIALLPG 59 usage_00072.pdb 1 NLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRV----AYHADRVAELGVGVAVDGP 56 usage_00178.pdb 1 PLNELLESCSVIIHHGSTTTQETATVNGVPQLILPGTFWDESRRAELLADRGAGLVLDPA 60 usage_00257.pdb 1 PMHALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDG-WDTGVRAQRTQEFGAGIALPVP 59 usage_00304.pdb 1 PLDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQG-GNFVEAGLRISDFGAAITVD-- 57 usage_00305.pdb 1 PLDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVP------VEAGLRISDFGAAITVD-- 52 usage_00306.pdb 1 PLDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQG-GNFVEAGLRISDFGAAITVDE- 58 usage_00307.pdb 1 -LDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQG-GNFVEAGLRISDFGAAITVDE- 57 usage_00308.pdb 1 -LDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQG-GNFVEAGLRISDFGAAITVD-- 56 usage_00432.pdb 1 PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA-GDSFANAQAVAQAGAGDHLLPD 59 HH GvPQ p Ga usage_00029.pdb 60 EDSTEAIADSCQELQAK 76 usage_00030.pdb 60 EDSTEAIADSCQELQAK 76 usage_00072.pdb 57 VPTIDSLSAALDTALA- 72 usage_00178.pdb 61 TFTEDDVRGQLARLL-- 75 usage_00257.pdb 60 ELTPDQLRESVKRVLD- 75 usage_00304.pdb 58 -E---AVEKACGELIGN 70 usage_00305.pdb 53 --TPEAVEKACGELIGN 67 usage_00306.pdb 59 -NTPEAVEKACGELI-- 72 usage_00307.pdb 58 -NTPEAVEKACGELIG- 72 usage_00308.pdb 57 --TPEAVEKACGELIGN 71 usage_00432.pdb 60 NISPDSVSGAAKRLLA- 75 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################