################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:47 2021 # Report_file: c_0300_35.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00044.pdb # 2: usage_00045.pdb # 3: usage_00445.pdb # 4: usage_00456.pdb # 5: usage_00457.pdb # # Length: 129 # Identity: 65/129 ( 50.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/129 ( 55.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/129 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 --MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC 58 usage_00045.pdb 1 --MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC 58 usage_00445.pdb 1 --KRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQ--AQAAVKGVVMELDDC 56 usage_00456.pdb 1 ----VAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEP--ALQALEGVVMELDDC 54 usage_00457.pdb 1 SPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEP--ALQALEGVVMELDDC 58 VAVTGAAGQI YSLLFR A G LG D P L LLei A Al GV ME DDC usage_00044.pdb 59 AFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVA 118 usage_00045.pdb 59 AFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVA 118 usage_00445.pdb 57 AFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVA 116 usage_00456.pdb 55 AFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVA 114 usage_00457.pdb 59 AFPLLSGVEIGSDPQKIFDGVSLALLVGARP---------LLEANGAIFTAQGKALNAVA 109 AFPLL G DP F ALLVGARP LLeAN IFT QGkA aVA usage_00044.pdb 119 SRNIKVLVV 127 usage_00045.pdb 119 SRNIKVLVV 127 usage_00445.pdb 117 SRDVKVLVV 125 usage_00456.pdb 115 ADDVRVGV- 122 usage_00457.pdb 110 ADDVRVGV- 117 V V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################