################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:38 2021 # Report_file: c_1330_7.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00887.pdb # 2: usage_00888.pdb # 3: usage_00889.pdb # 4: usage_00890.pdb # # Length: 71 # Identity: 61/ 71 ( 85.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 71 ( 85.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 71 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00887.pdb 1 NLLGSFCVFEGFIELVNSIKNH-----NDNIHNNLYISIGYDHEEIGSLSEVGARSYCTK 55 usage_00888.pdb 1 NLLGSFCVFEGFIELVNSIKN-HTS---DNIHNNLYISIGYDHEEIGSLSEVGARSYCTK 56 usage_00889.pdb 1 NLLGSFCVFEGFIELVNSIKN-HTSNENDNIHNNLYISIGYDHEEIGSLSEVGARSYCTK 59 usage_00890.pdb 1 NLLGSFCVFEGFIELVNSIKN-HTS---DNIHNNLYISIGYDHEEIGSLSEVGARSYCTK 56 NLLGSFCVFEGFIELVNSIKN DNIHNNLYISIGYDHEEIGSLSEVGARSYCTK usage_00887.pdb 56 NFIDRIISS-- 64 usage_00888.pdb 57 NFIDRIISSVF 67 usage_00889.pdb 60 NFIDRIISS-- 68 usage_00890.pdb 57 NFIDRIIS--- 64 NFIDRIIS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################