################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:29:52 2021 # Report_file: c_1221_106.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00007.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00321.pdb # 5: usage_00571.pdb # 6: usage_00572.pdb # 7: usage_00646.pdb # 8: usage_00647.pdb # 9: usage_00807.pdb # 10: usage_00808.pdb # 11: usage_00810.pdb # 12: usage_00880.pdb # 13: usage_00913.pdb # 14: usage_00938.pdb # 15: usage_00940.pdb # 16: usage_00983.pdb # 17: usage_01197.pdb # 18: usage_01214.pdb # 19: usage_01337.pdb # 20: usage_01529.pdb # 21: usage_01530.pdb # 22: usage_01536.pdb # 23: usage_01537.pdb # 24: usage_01538.pdb # 25: usage_01539.pdb # 26: usage_01675.pdb # 27: usage_01676.pdb # 28: usage_01786.pdb # 29: usage_01787.pdb # 30: usage_01788.pdb # 31: usage_01789.pdb # 32: usage_01813.pdb # 33: usage_01814.pdb # 34: usage_01826.pdb # 35: usage_01827.pdb # 36: usage_01951.pdb # 37: usage_02003.pdb # 38: usage_02017.pdb # 39: usage_02020.pdb # 40: usage_02021.pdb # 41: usage_02023.pdb # 42: usage_02024.pdb # 43: usage_02121.pdb # 44: usage_02348.pdb # 45: usage_02400.pdb # 46: usage_02463.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 48 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 48 ( 47.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00011.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00012.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00321.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00571.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00572.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00646.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00647.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00807.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00808.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00810.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00880.pdb 1 -IHADVI-EEIGFAKVT-----------GEKQKLAPFTKKLAEK---- 31 usage_00913.pdb 1 ----DFKMTKEGLVLLI----------KDY-QNLEEVLNAISARITQM 33 usage_00938.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00940.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_00983.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01197.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01214.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01337.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01529.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMA-- 35 usage_01530.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMA-- 35 usage_01536.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMA-- 35 usage_01537.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01538.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMA-- 35 usage_01539.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01675.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01676.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01786.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01787.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01788.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01789.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01813.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01814.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01826.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMA-- 35 usage_01827.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_01951.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02003.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKITEKMAT- 36 usage_02017.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02020.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02021.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02023.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02024.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02121.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02348.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02400.pdb 1 -LSYDLQNTIYGMYLSV----------KGYNDKQPILLKKIIEKMAT- 36 usage_02463.pdb 1 LAFVTLET--YYGNSTSLRGCIGYVEAVAPLKEIVSKAAIAAAF---- 42 d g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################