################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:15 2021 # Report_file: c_0360_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00033.pdb # 9: usage_00053.pdb # # Length: 134 # Identity: 72/134 ( 53.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 127/134 ( 94.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/134 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00007.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00008.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00009.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00030.pdb 1 -KSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 59 usage_00031.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00032.pdb 1 DKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 60 usage_00033.pdb 1 -KSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARY 59 usage_00053.pdb 1 -RYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAF 59 kskLiqlGiTHVvNAAaGkfqVDTGakfYRgMsleYyGiEADDnPfFDLSVyFlPvAry usage_00006.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00007.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00008.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00009.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00030.pdb 60 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLR 119 usage_00031.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00032.pdb 61 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLR 120 usage_00033.pdb 60 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLR 119 usage_00053.pdb 60 IDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNRCVLPNRGFLK 119 IraALSvpqgrvLVHCaMGvSRSATLVLAfLMI enMTLVeAIQtVqahRnicPNsGFLr usage_00006.pdb 121 QLQVLDNRL----- 129 usage_00007.pdb 121 QLQVLDNRLG---- 130 usage_00008.pdb 121 QLQVLDNRL----- 129 usage_00009.pdb 121 QLQVLDNRLGR--- 131 usage_00030.pdb 120 QLQVLDNRLGR--- 130 usage_00031.pdb 121 QLQVLDNRL----- 129 usage_00032.pdb 121 QLQVLDNRLGRETG 134 usage_00033.pdb 120 QLQVLDNRLGRET- 132 usage_00053.pdb 120 QLRELDKQLVQQR- 132 QLqvLDnrL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################