################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:05 2021 # Report_file: c_1394_127.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00371.pdb # 2: usage_00596.pdb # 3: usage_00597.pdb # # Length: 63 # Identity: 53/ 63 ( 84.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 63 ( 84.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 63 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00371.pdb 1 STLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQ-DPNPDVVSFRSTWVKRIQENKQKWKER 59 usage_00596.pdb 1 ---VAQSQIGFIDFIVEPTFSVLTDVAEKSVQP---PDVVSFRSTWVKRIQENKQKWKER 54 usage_00597.pdb 1 ---VAQSQIGFIDFIVEPTFSVLTDVAEKSVQ------VVSFRSTWVKRIQENKQKWKER 51 VAQSQIGFIDFIVEPTFSVLTDVAEKSVQ VVSFRSTWVKRIQENKQKWKER usage_00371.pdb 60 AAS 62 usage_00596.pdb 55 AAS 57 usage_00597.pdb 52 AA- 53 AA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################