################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:55 2021 # Report_file: c_1434_22.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_03345.pdb # 2: usage_03346.pdb # 3: usage_03347.pdb # 4: usage_03363.pdb # # Length: 220 # Identity: 27/220 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 170/220 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/220 ( 22.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03345.pdb 1 ----------------SPPLFTEVIKAANKYQQQAQALSQAGLVLADTLTRLTIHNG--- 41 usage_03346.pdb 1 PVIEITLKTINNLKVNSPPLFTEVIKAANKYQQQAQALSQAGLVLADTLTRLTIHNG--- 57 usage_03347.pdb 1 ----------------SPPLFTEVIKAANKYQQQAQALSQAGLVLADTLTRLTIHNG--- 41 usage_03363.pdb 1 ---------------QFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQ 45 spPlftevIkaankYqqqaqalsqAglvlaDtLtrltihng usage_03345.pdb 42 --GDFGEGFKKLADAIKDLENRRDDVAKVLLNEFITPNKQAIEDDQKAIATFEKNYKKDR 99 usage_03346.pdb 58 --GDFGEGFKKLADAIKDLENRRDDVAKVLLNEFITPNKQAIEDDQKAIATFEKNYKKDR 115 usage_03347.pdb 42 --GDFGEGFKKLADAIKDLENRRDDVAKVLLNEFITPNKQAIEDDQKAIATFEKNYKKDR 99 usage_03363.pdb 46 GSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQ 105 gdfGegfkklAdaikdleNrrddvaKvllNEfiTpnkQaiEdDqkaiatfeKnYkkdr usage_03345.pdb 100 DQ-RQDILKLEAKTRKAG-------------KITELNDKIKESEQLNANKLRDVVL-ERR 144 usage_03346.pdb 116 DQ-RQDILKLEAKTR---K----TTPEVLKQQITELNDKIKESEQLNANKLRDVVL-ERR 166 usage_03347.pdb 100 DQ-RQDILKLEAKTRKAGKK---TTPEVLKQQITELNDKIKESEQLNANKLRDVVL-ERR 154 usage_03363.pdb 106 RSKGDALDKCQAELKKLRKKPQKY-SDKELQYIDAISNKQGELENYVSDGYKTALTEERR 164 dq rqdilKleAktr ItelndKikEsEqlnanklrdvvl ERR usage_03345.pdb 145 KHATFLSQFNQFLEKEIELSADTSKFSTNLNTHRDLINSQ 184 usage_03346.pdb 167 KHATFLSQFNQFLEKEIELSADTSKFSTNLNTHRDLINS- 205 usage_03347.pdb 155 KHATFLSQFNQFLEKEIELSADTSKFSTNLNTHRDLINSQ 194 usage_03363.pdb 165 RFCFLVEKQCAVAKNSAAYHSKGK------ELLAQK---- 194 khatflsqfnqflekeielsadts nthrdl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################