################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:43 2021 # Report_file: c_1101_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00288.pdb # 2: usage_00289.pdb # 3: usage_00290.pdb # 4: usage_00389.pdb # 5: usage_00390.pdb # 6: usage_00391.pdb # 7: usage_00545.pdb # 8: usage_00757.pdb # 9: usage_00758.pdb # # Length: 118 # Identity: 35/118 ( 29.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/118 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/118 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 --ARYADWLFTTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 54 usage_00289.pdb 1 ----------TTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 46 usage_00290.pdb 1 ----------TTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 46 usage_00389.pdb 1 --ARYADWLFTTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 54 usage_00390.pdb 1 YYARYADWLFTTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 56 usage_00391.pdb 1 --ARYADWLFTTPLLLLDLALLAK----VDRVTIGTLIGVDALMIVTGLIGALSKTPLAR 54 usage_00545.pdb 1 ----------TTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIADLSERDWVR 50 usage_00757.pdb 1 --ARYADWLFTTPLLLLDLALLAK----VDRVSIGTLVGVDALMIVTGLVGALSHTPLAR 54 usage_00758.pdb 1 ---------FTTPLLLLDLALLAK----VDRVSIGTLVGVDALMIVTGLVGALSHTPLAR 47 TTPLLLLdLallAk vDrv IGtL gvdalmIvtGL gaLS tplaR usage_00288.pdb 55 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 112 usage_00289.pdb 47 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 104 usage_00290.pdb 47 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 104 usage_00389.pdb 55 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 112 usage_00390.pdb 57 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 114 usage_00391.pdb 55 YTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAYPILWIVG 112 usage_00545.pdb 51 YLWYICGVCAFLIILWGIWNPLRAKTRTQSSELANLYDKLVTYFTVLWIGYPIVWIIG 108 usage_00757.pdb 55 YTWWLFSTICMIVVLYFLATSLRAAAKERGPEVASTFNTLTALVLVLWTAYPILWIIG 112 usage_00758.pdb 48 YTWWLFSTICMIVVLYFLATSLRAAAKERGPEVASTFNTLTALVLVLWTAYPILWIIG 105 YtWwlfsti vLy l tsLR aa r Ev stfntLtalv VLWtaYPIlWI G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################