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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:05:28 2021
# Report_file: c_0328_53.html
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#====================================
# Aligned_structures: 8
#   1: usage_00122.pdb
#   2: usage_00123.pdb
#   3: usage_00217.pdb
#   4: usage_00286.pdb
#   5: usage_00302.pdb
#   6: usage_00303.pdb
#   7: usage_00304.pdb
#   8: usage_00490.pdb
#
# Length:        197
# Identity:      147/197 ( 74.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    148/197 ( 75.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           40/197 ( 20.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00122.pdb         1  --NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   58
usage_00123.pdb         1  --NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   58
usage_00217.pdb         1  PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   60
usage_00286.pdb         1  PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   60
usage_00302.pdb         1  ---EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   57
usage_00303.pdb         1  -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   59
usage_00304.pdb         1  -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   59
usage_00490.pdb         1  -PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA   59
                              EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQA

usage_00122.pdb        59  AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQGFFGVDRSDRDPQHARAAFSDFSK  117
usage_00123.pdb        59  AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQGFFGVDRSDRDPQHARAAFSDFSK  117
usage_00217.pdb        61  AIDRFIRLNPTHPNIDYVMYMRGLTNMALDD-----------SSDRDPQHARAAFSDFSK  109
usage_00286.pdb        61  AIDRFIRLNPTHPNIDYVMYMRGLTNMALD-D--------------DPQQARAAFSDFSK  105
usage_00302.pdb        58  AIDRFIRLNPTHPNIDYVMYMRGLTNMALDD-----------SSDRDPQHARAAFSDFSK  106
usage_00303.pdb        60  AIDRFIRLNPTHPNIDYV-Y-RGLTNA-LDDSALQGFFG-VDRSDRDPQHARAAFSDFSK  115
usage_00304.pdb        60  AIDRFIRLNPTHPNIDYV-Y-RGLTNA-LDDSALQGFFG-VDRSDRDPQHARAAFSDFSK  115
usage_00490.pdb        60  AIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-------------RDPQHARAAFSDFSK  106
                           AIDRFIRLNPTHPNIDYV Y RGLTN  LD                DPQhARAAFSDFSK

usage_00122.pdb       118  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ  177
usage_00123.pdb       118  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ  177
usage_00217.pdb       110  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT-  168
usage_00286.pdb       106  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ  165
usage_00302.pdb       107  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT-  165
usage_00303.pdb       116  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGLRDYPDTQA  175
usage_00304.pdb       116  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGLRDYPDTQA  175
usage_00490.pdb       107  LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ  166
                           LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEG         

usage_00122.pdb       178  ATRDALPLMENAYRQMQ  194
usage_00123.pdb       178  ATRDALPLMENAYRQMQ  194
usage_00217.pdb            -----------------     
usage_00286.pdb       166  ATRDALPLMENAYRQMQ  182
usage_00302.pdb            -----------------     
usage_00303.pdb       176  TRDALPL-E-NAYRQQ-  189
usage_00304.pdb       176  TRDALPL-E-NAYRQQ-  189
usage_00490.pdb       167  ATRDALPLMENAYRQMQ  183
                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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