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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:58:23 2021
# Report_file: c_1108_36.html
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#====================================
# Aligned_structures: 3
#   1: usage_00029.pdb
#   2: usage_00235.pdb
#   3: usage_00236.pdb
#
# Length:        241
# Identity:       97/241 ( 40.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    172/241 ( 71.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           69/241 ( 28.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00029.pdb         1  PQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALG   60
usage_00235.pdb         1  PQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEK------   54
usage_00236.pdb         1  PQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQ-----   55
                           PQTRSLLgVFEEDAtaisnYmNQLyQAMhRiYdAQNElsaAThltSKlLkeYEK      

usage_00029.pdb        61  KGDEEVISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLA  120
usage_00235.pdb        55  ---EVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIA  111
usage_00236.pdb        56  ---EVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIA  112
                              EvmsSTLqqFSKViDELsscHavLstQLADaMmfPItQFkErDLkEilTLKevFqiA

usage_00029.pdb       121  SNEHDLSMAKYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRKQMAM  180
usage_00235.pdb       112  SNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIAL  171
usage_00236.pdb       113  SNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIAL  172
                           SNdHDaainrYSRLsKKrENdKVKyEVtedVytsRkKQHqtmmhYfCALNtLQYkKkiAl

usage_00029.pdb       181  MEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQQELLS  240
usage_00235.pdb       172  LEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEV  231
usage_00236.pdb       173  L-----------------------------------------------------------  173
                           l                                                           

usage_00029.pdb            -     
usage_00235.pdb       232  A  232
usage_00236.pdb            -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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