################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:44 2021 # Report_file: c_0243_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00003.pdb # 2: usage_00055.pdb # 3: usage_00056.pdb # 4: usage_00062.pdb # 5: usage_00076.pdb # 6: usage_00077.pdb # 7: usage_00261.pdb # 8: usage_00265.pdb # # Length: 118 # Identity: 31/118 ( 26.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/118 ( 89.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/118 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -EKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 59 usage_00055.pdb 1 -EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 59 usage_00056.pdb 1 --KILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 58 usage_00062.pdb 1 NEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 60 usage_00076.pdb 1 -EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 59 usage_00077.pdb 1 -EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 59 usage_00261.pdb 1 -EKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDG 59 usage_00265.pdb 1 -KQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIA-----G 54 kILIVdDq giRiLLnevFnkeGyqTfqAAnGlqALdivtkerPDLvllDmk G usage_00003.pdb 60 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLP 117 usage_00055.pdb 60 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY-- 115 usage_00056.pdb 59 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY-- 114 usage_00062.pdb 61 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY-- 116 usage_00076.pdb 60 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY-- 115 usage_00077.pdb 60 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL- 116 usage_00261.pdb 60 IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL- 116 usage_00265.pdb 55 LKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPV--NRLREMVFAC-- 108 ieiLkrmkvidenirViimtAygeldmIqeskeLGalthfaKPf deiRdaVkky #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################