################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:36:39 2021 # Report_file: c_0147_20.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00007.pdb # 2: usage_00052.pdb # 3: usage_00090.pdb # 4: usage_00113.pdb # 5: usage_00157.pdb # 6: usage_00178.pdb # 7: usage_00181.pdb # 8: usage_00226.pdb # 9: usage_00254.pdb # 10: usage_00255.pdb # 11: usage_00290.pdb # 12: usage_00346.pdb # 13: usage_00347.pdb # 14: usage_00361.pdb # 15: usage_00424.pdb # 16: usage_00653.pdb # # Length: 127 # Identity: 17/127 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/127 ( 44.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/127 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -LLEQNPRWRLVPRGQAVNLRCILKNSQ--Y-PWMSWYQQDLQKQLQWLFTLRSP--G-D 53 usage_00052.pdb 1 -KLEES-GGGLVQPGGSMKLSCAASGF-TSSDAWMDWVRQSPEKGLEWVAEIRNKANNHA 57 usage_00090.pdb 1 VQLQES-GGGLVQPRGSLKLSCAASGF-TFNTDAMNWVRQAPGKGLEWVARIRSKGFNFA 58 usage_00113.pdb 1 VTLQES-GGGLVQPGGSMKLSCAASGF-TFSDAWVDWVRQSPGKGLEWVAEIRNKANNHA 58 usage_00157.pdb 1 -TLQES-GGGLVQPGGSMKLSCAASGF-TFSDAWVDWVRQSPGKGLEWVAEIRNKANNHA 57 usage_00178.pdb 1 VTLQES-GGGLVQPGGSMKLSCAASGF-TFSDAWVDWVRQSPGKGLEWVAEIRNKANNHA 58 usage_00181.pdb 1 -TLQES-GGGLVQPGGSMKLSCAASGF-TFSDAWVDWVRQSPGKGLEWVAEIRNKANNHA 57 usage_00226.pdb 1 VQLQQS-GGGLVQPGGSMKIFCAASGF-TFSDAWMDWVRQSPEKGLEWVAEIRNKANNHE 58 usage_00254.pdb 1 VQLQES-GGGLVQPGGSMKLSCVASGF-TFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYA 58 usage_00255.pdb 1 VQLQES-GGGLVQPGGSMKLSCVASGF-TFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYA 58 usage_00290.pdb 1 -KLEES-GGGLVQPGGSMKLSCAASGF-TFSDAWMDWVRQSPEKGLEWVAEIRSKVNNHA 57 usage_00346.pdb 1 VKVEES-GGGLVQPGGSMKLSCVASGF-TFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYA 58 usage_00347.pdb 1 VKVEES-GGGLVQPGGSMKLSCVASGF-TFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYA 58 usage_00361.pdb 1 VKLLES-GGGLVQPGGSMKLSCVASGF-TFSIFWMNWVRQSPEKGLEWVAEVRLKSNNYA 58 usage_00424.pdb 1 VKVEES-GGGLVQPGGSMKISCVVSGL-TFSNYWMSWVRQSPEKGLEWVAEIRLKSDNYA 58 usage_00653.pdb 1 -TLQES-GGGLVQPGGSMKLSCAASGF-TFSDAWVDWVRQSPGKGLEWVAEIRNKANNHA 57 s gggLVqpggs k C sg w WvrQ p KgLeWva R k n usage_00007.pdb 54 KEVKSL--PGADYLATRVT-DTELRLQVANMSQ--GRTLYCTCSA-DRVGN--T-LYFGE 104 usage_00052.pdb 58 RHYNESVKG--RFTISRDDSKSSVYLQMNSLRAEDSGIYYCTRTYYY-GSSYGYCDVWGT 114 usage_00090.pdb 59 TYYADSVRD--RFTISRDDSQSMLYLQMNNLKTEDTGIYYCVRGR-D-GE---AMDYWGQ 111 usage_00113.pdb 59 TKYTESVKG--RFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVP-Q-LGR--GFAYWGQ 112 usage_00157.pdb 58 TKYTESVKG--RFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVP-Q-LGR--GFAYWGQ 111 usage_00178.pdb 59 TKYTESVKG--RFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVP-Q-LGR--GFAYWGQ 112 usage_00181.pdb 58 TKYTESVKG--RFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVP-Q-LGR--GFAYWGQ 111 usage_00226.pdb 59 TYYAESVKG--RFTITRDDSKSRMSLQMNSLRAEDTGIYYCSGGK----V---RNAYWGQ 109 usage_00254.pdb 59 THYAESVKG--RFTISRDDSKSSVYLQMNNLRAEDTGIYYCTGV-----G---QFAYWGQ 108 usage_00255.pdb 59 THYAESVKG--RFTISRDDSKSSVYLQMNNLRAEDTGIYYCTGV-----G---QFAYWGQ 108 usage_00290.pdb 58 IHYAESVKG--RFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGW---------SFLYWGQ 106 usage_00346.pdb 59 THYAESVKG--RFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGG-A-VG---AMDYWGQ 111 usage_00347.pdb 59 THYAESVKG--RFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGG-A-VG---AMDYWGQ 111 usage_00361.pdb 59 THYAESVKG--RFTISRDDSKSGVYLQMNNLRAEDTGIYYCTRGY-Y-GSN--YGEYWGQ 112 usage_00424.pdb 59 TYYAESVKG--KFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLP----------MDYWGQ 106 usage_00653.pdb 58 TKYTESVKG--RFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVP-Q-LGR--GFAYWGQ 111 y s ft Rdd s LQmn l giyYC ywG usage_00007.pdb 105 GSRLIV- 110 usage_00052.pdb 115 GTTVTV- 120 usage_00090.pdb 112 GTTLTV- 117 usage_00113.pdb 113 GTLVTV- 118 usage_00157.pdb 112 GTLVTV- 117 usage_00178.pdb 113 GTLVTV- 118 usage_00181.pdb 112 GTLVTV- 117 usage_00226.pdb 110 GTTVTV- 115 usage_00254.pdb 109 GTTVTV- 114 usage_00255.pdb 109 GTTVTV- 114 usage_00290.pdb 107 GTLVTVS 113 usage_00346.pdb 112 GTSVTV- 117 usage_00347.pdb 112 GTSVTV- 117 usage_00361.pdb 113 GTTLTV- 118 usage_00424.pdb 107 GTSVTV- 112 usage_00653.pdb 112 GTLVTVS 118 Gt tV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################