################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:49 2021 # Report_file: c_0900_115.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00225.pdb # 2: usage_00259.pdb # 3: usage_00260.pdb # 4: usage_00261.pdb # 5: usage_00552.pdb # 6: usage_01138.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 67 ( 1.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 67 ( 68.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00225.pdb 1 FKLNY-----Y--G-TNDVYYESSKPN----------------EYAKFIFYNYHDGKVNV 36 usage_00259.pdb 1 GTTDI-----GSNT-TVKTGDLVTY--DKEN--GMA-----K-KVFYSFIDDKNH--NKK 42 usage_00260.pdb 1 GTTDI-----GSNT-TVKTGDLVTY--DKEN--GMA-----K-KVFYSFIDDKNH--NKK 42 usage_00261.pdb 1 GTTDI-----GSNT-TVKTGDLVTY--DKEN--GMA-----K-KVFYSFIDDKNH--NKK 42 usage_00552.pdb 1 -----ALYPDD---ETHGVFSGSAV--E-KD---GK-----MFLVYTYYRDPTH--NKGE 39 usage_01138.pdb 1 ------------AF-VDIES--------ITNGKFYYNEIDSK-AQIYLLFLRE-Y---KS 34 t usage_00225.pdb 37 VANLFGR 43 usage_00259.pdb 43 LLVIR-- 47 usage_00260.pdb 43 LLVIR-- 47 usage_00261.pdb 43 LLVIR-- 47 usage_00552.pdb 40 KETQ--- 43 usage_01138.pdb 35 FVIL--- 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################