################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:47 2021 # Report_file: c_1487_392.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00875.pdb # 2: usage_02162.pdb # 3: usage_02582.pdb # 4: usage_02583.pdb # 5: usage_03763.pdb # 6: usage_03764.pdb # 7: usage_03765.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 48 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 48 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00875.pdb 1 -------------SERFLEIAEKMPERGWYFD--IPLYVKYLKEKE-- 31 usage_02162.pdb 1 ----LLKARQERRLAEINRE----------FLCD-QKYSDEE------ 27 usage_02582.pdb 1 -RETYEMLLKIKESLELMQY----------LP--QHTIETYRQQQQQ- 34 usage_02583.pdb 1 -RETYEMLLKIKESLELMQY----------LP--QHTIETYRQQQQ-- 33 usage_03763.pdb 1 GRKNFEILMELKRSLELMEL----------VP--QPLVDSYEQQQQ-- 34 usage_03764.pdb 1 -RRNFEILMELKRSLELMEL----------VP--QPLVDSYDQQQQLL 35 usage_03765.pdb 1 GRRNFEILMELKRSLELMEL----------VP--QPLVDSYDQQQQ-- 34 s e y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################