################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:24 2021 # Report_file: c_1320_41.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00139.pdb # 2: usage_00228.pdb # 3: usage_00286.pdb # 4: usage_00329.pdb # 5: usage_00578.pdb # 6: usage_00614.pdb # 7: usage_00615.pdb # # Length: 41 # Identity: 4/ 41 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 41 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 41 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 LLNDTGNYTCMLRNT-T-------YCS-KVAFPLEVVQKDS 32 usage_00228.pdb 1 ECADAATYYCQNYYVG-SSTN--YAFTFGGGTEVVVKGD-- 36 usage_00286.pdb 1 QCDDVATYYCLGSYDCN----RAECHAFGGGTKVVVEVR-- 35 usage_00329.pdb 1 ECDDAATYYCQCTYGTYA-GS--FFYSFGGGTEVVVERT-- 36 usage_00578.pdb 1 ECADAATYYCQNYYVG-SSTN--YAFTFGGGTEVVVKGD-- 36 usage_00614.pdb 1 QCDDAATYYCQQGYT---SSN--VNNAFGGGTEVVVKGD-- 34 usage_00615.pdb 1 QCDDAATYYCQQGYT---SSN--VNNAFGGGTEVVVKGD-- 34 c D atYyC y gggt vvV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################