################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:42 2021 # Report_file: c_0428_19.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00023.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00089.pdb # 5: usage_00094.pdb # 6: usage_00116.pdb # 7: usage_00117.pdb # 8: usage_00118.pdb # 9: usage_00190.pdb # 10: usage_00191.pdb # 11: usage_00192.pdb # 12: usage_00193.pdb # 13: usage_00194.pdb # 14: usage_00210.pdb # 15: usage_00211.pdb # 16: usage_00336.pdb # 17: usage_00337.pdb # 18: usage_00339.pdb # 19: usage_00413.pdb # 20: usage_00414.pdb # 21: usage_00449.pdb # 22: usage_00450.pdb # # Length: 110 # Identity: 68/110 ( 61.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/110 ( 66.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/110 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 --AVGFDAGG-RESFRFGGAACAVGG---GH-LLWTLPEA-Q----AIPQEVVWDLLEET 48 usage_00085.pdb 1 ELAVGFNAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00086.pdb 1 ELAVGFNAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00089.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGD-GH-LLWTLPEA-QAGERI-PQEVVWDLLEET 54 usage_00094.pdb 1 ELAVGFDAGG-RESFRFGGAACAVG-G--GH-LLWTLPEA-QAG-ERIPQEVVWDLLEET 53 usage_00116.pdb 1 --AVGFDAGG-RESFRFGGAACAVGGG--GH-LLWTLPEA-QAG-ERIPQEVVWDLLEET 52 usage_00117.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00118.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00190.pdb 1 ELAVGFDAGG-RESFRFGGAACAVGGG--GH-LLWTLPEA-QAG-ERIPQEVVWDLLEET 54 usage_00191.pdb 1 ELAVGFDAGG-RESFRFGGAACAV------H-LLWTLPEA-QAG-ERIPQEVVWDLLEET 50 usage_00192.pdb 1 ELAVGFDAGG-RESFRFGGAACAVG----GH-LLWTLPEA-----ERIPQEVVWDLLEET 49 usage_00193.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00194.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00210.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00211.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00336.pdb 1 ELAVGFDAGG-RESFRFGGAACAVGGD--GGHLLWTLPEA-QAG-ERIPQEVVWDLLEET 55 usage_00337.pdb 1 ELAVGFDAGG-RESFRFGGAACAVGGD--GG-HLLWTLP-------RIPQEVVWDLLEET 49 usage_00339.pdb 1 ELAVGFDAGG-RESFRFGGAACAVGG---GH-LLWTLPE-------RIPQEVVWDLLEET 48 usage_00413.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGG---H-LLWTLPEA-QAGERI-PQEVVWDLLEET 52 usage_00414.pdb 1 ELAVGFDAG---ESF-RFGGAACAVGG--DH-LLWTL-PEAQAGERI-PQEVVWDLLEET 51 usage_00449.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 usage_00450.pdb 1 ELAVGFDAGGRESF--RFGGAACAVGGDGGH-LLWTLPEA-QAGERI-PQEVVWDLLEET 55 AVGF AG G A lLwtl PQEVVWDLLEET usage_00023.pdb 49 LWAFRR-AGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 96 usage_00085.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00086.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00089.pdb 55 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 104 usage_00094.pdb 54 LWAFRRKAGRLPSRVLLLRNGRVPQDEFALALEALAREGIAYDLVSVRK- 102 usage_00116.pdb 53 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 102 usage_00117.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00118.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00190.pdb 55 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 104 usage_00191.pdb 51 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 99 usage_00192.pdb 50 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 98 usage_00193.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00194.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00210.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00211.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00336.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 105 usage_00337.pdb 50 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 99 usage_00339.pdb 49 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 98 usage_00413.pdb 53 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 102 usage_00414.pdb 52 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKS 101 usage_00449.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 usage_00450.pdb 56 LWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRK- 104 LWAFRR AGRLPSRVLLLRdGRVPQDEFALALEALAREGIAYDLVSVRK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################