################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:16 2021 # Report_file: c_1414_67.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00075.pdb # 2: usage_00107.pdb # 3: usage_00108.pdb # 4: usage_00110.pdb # 5: usage_00223.pdb # 6: usage_00232.pdb # 7: usage_00298.pdb # 8: usage_00308.pdb # 9: usage_00313.pdb # 10: usage_00317.pdb # 11: usage_00368.pdb # 12: usage_00410.pdb # 13: usage_00459.pdb # 14: usage_00579.pdb # 15: usage_00580.pdb # 16: usage_00581.pdb # # Length: 61 # Identity: 8/ 61 ( 13.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 61 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 61 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 TQEQIEALEKEFE-R-THYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQR 58 usage_00107.pdb 1 -HHQLRTMKSYFA-I-NHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR---- 53 usage_00108.pdb 1 TRAQLDVLEALFA-K-TRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ------- 51 usage_00110.pdb 1 TDEQLEALENLFQ-E-TKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRSG------ 52 usage_00223.pdb 1 TEDQVEILEYNFN-KVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRS------- 52 usage_00232.pdb 1 -EDQVEILEYNFNKV-NKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRS------- 51 usage_00298.pdb 1 TQNQIEVLENVFR-V-NCYPGIDILEDLAQKLNLELDRIQIWFQNRRAKLKR-------- 50 usage_00308.pdb 1 TSQQLQELEATFQ-R-NRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR--------- 49 usage_00313.pdb 1 -SQQLQELEATFQ-R-NRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR------- 50 usage_00317.pdb 1 TSYQLEELEKVFQ-K-THYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR--------- 49 usage_00368.pdb 1 TSFQLEELEKAFS-R-THYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR--------- 49 usage_00410.pdb 1 TSFQLEELEKAFS-R-THYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQE------ 52 usage_00459.pdb 1 TAEQLEELERAFE-R-THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ------- 51 usage_00579.pdb 1 SASQLDELERAFE-R-TQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSVS-- 56 usage_00580.pdb 1 SASQLDELERAFE-R-TQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRK-------- 50 usage_00581.pdb 1 SASQLDELERAFE-R-TQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRK-------- 50 Q le F Pd A L WF r A r usage_00075.pdb 59 R 59 usage_00107.pdb - usage_00108.pdb - usage_00110.pdb - usage_00223.pdb - usage_00232.pdb - usage_00298.pdb - usage_00308.pdb - usage_00313.pdb - usage_00317.pdb - usage_00368.pdb - usage_00410.pdb - usage_00459.pdb - usage_00579.pdb - usage_00580.pdb - usage_00581.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################