################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:48 2021 # Report_file: c_1274_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00015.pdb # 2: usage_00117.pdb # 3: usage_00135.pdb # 4: usage_00173.pdb # 5: usage_00269.pdb # 6: usage_00270.pdb # 7: usage_00314.pdb # 8: usage_00333.pdb # 9: usage_00337.pdb # 10: usage_00343.pdb # 11: usage_00347.pdb # 12: usage_00349.pdb # 13: usage_00563.pdb # 14: usage_00617.pdb # # Length: 77 # Identity: 28/ 77 ( 36.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 77 ( 62.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 77 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITIKQHTVVTTTKGENF----TETDVKMMERVVEQM 55 usage_00117.pdb 1 NQVYYRPMDE-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00135.pdb 1 NQVYYRPMDE-YSNQNNFVHDCVNITIKQHTVTTT-----S----TETDVKMMERVVEQM 50 usage_00173.pdb 1 NQVYYRPMDE-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00269.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00270.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00314.pdb 1 NQVYYRPMDE-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00333.pdb 1 NQVYYRPADQ-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00337.pdb 1 NQVYYRPVSQ-YSNQKNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00343.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00347.pdb 1 NQVYYRP-MDEYSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVVEQM 55 usage_00349.pdb 1 NQVYYRPMDE-YSNQNNFVHDCVNITIKQHTVTTTTKGENF----TETDVKMMERVIEQM 55 usage_00563.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITVKEHTVTTTTKGENF----TETDIKMMERVVEQM 55 usage_00617.pdb 1 NQVYYRPVDQ-YSNQNNFVHDCVNITVKQHTVTTTTKGENFTETDIKIMERVVEQMCITQ 59 NQVYYRP YSNQnNFVHDCVNIT KqHTVtTT f tetd kmmErv eqm usage_00015.pdb 56 CVTQYQKESQA------ 66 usage_00117.pdb 56 CITQYERESQAY-YQ-R 70 usage_00135.pdb 51 CITQYERESQAY----- 62 usage_00173.pdb 56 CITQYERESQAY----- 67 usage_00269.pdb 56 CVTQYQKESQAY-YD-- 69 usage_00270.pdb 56 CVTQYQKESQA------ 66 usage_00314.pdb 56 CITQYERESQA------ 66 usage_00333.pdb 56 CVTQYQKESQAY-YDG- 70 usage_00337.pdb 56 CVTQYQK---------- 62 usage_00343.pdb 56 CVTQYQKESQAY-YD-- 69 usage_00347.pdb 56 CITQYKRESQAYYQR-- 70 usage_00349.pdb 56 CITQYERESQAY-Y--Q 69 usage_00563.pdb 56 CITQYQRESQAY-Y--- 68 usage_00617.pdb 60 YQRESQAYYQ----RG- 71 c tqy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################