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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:02:45 2021
# Report_file: c_1402_3.html
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#====================================
# Aligned_structures: 4
#   1: usage_00028.pdb
#   2: usage_00029.pdb
#   3: usage_00484.pdb
#   4: usage_00664.pdb
#
# Length:        140
# Identity:      110/140 ( 78.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    110/140 ( 78.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/140 ( 16.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00028.pdb         1  -VEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ   59
usage_00029.pdb         1  -VEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ   59
usage_00484.pdb         1  ---------ERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ   51
usage_00664.pdb         1  PVEAAERNCERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ   60
                                    ERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ

usage_00028.pdb        60  FNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKK  119
usage_00029.pdb        60  FNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKK  119
usage_00484.pdb        52  FNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSAAQERRKQ  111
usage_00664.pdb        61  FNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSAAQERRKQ  120
                           FNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALS A E RK 

usage_00028.pdb       120  KEDKKRSAENNLNDEKNK--  137
usage_00029.pdb       120  KEDKKRSAENNLNDEKNK--  137
usage_00484.pdb       112  KENKEK--------------  117
usage_00664.pdb       121  KENKEKDAKDKCAMESKRNK  140
                           KE K                


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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