################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:59 2021 # Report_file: c_1200_386.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00029.pdb # 2: usage_01250.pdb # 3: usage_01286.pdb # 4: usage_01417.pdb # 5: usage_01978.pdb # 6: usage_02785.pdb # 7: usage_02879.pdb # 8: usage_03024.pdb # 9: usage_03175.pdb # 10: usage_03872.pdb # 11: usage_04532.pdb # 12: usage_04634.pdb # 13: usage_04650.pdb # 14: usage_05070.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 54 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 54 ( 72.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 ---RNARTVVYFGEGE-----EGY--FE-ELKVGPLP------VSDETT-IE-- 34 usage_01250.pdb 1 --EGPVFDK-----NG-----DFY--IVAPDVEVNG--KP---AGEILR-ID-- 32 usage_01286.pdb 1 NKATLVCLISD---FY-----PGA--VT-VAWKADS--SP---VKAGVE-TT-- 35 usage_01417.pdb 1 NKATLVCTITD---FY-----PGV--VT-VDWKVDG--TP---VTQGME-TT-- 35 usage_01978.pdb 1 GGASVVCFLNN---FY-----PKD--IN-VKWKIDG--SE---RQ--------- 29 usage_02785.pdb 1 NKATLVCLISD---FY-----PGA--VT-VAWKADS--SP---VKAGVE-TT-- 35 usage_02879.pdb 1 ----TFLLRF----SDSEIGGITI--AH-VIRG----QD-----GSPQI-ENI- 32 usage_03024.pdb 1 NKATLVCTITD---FY-----PGV--VT-VDWKVDG--TP---VTEGME-T--- 34 usage_03175.pdb 1 NKATLVCLISD---FY-----PGA--VT-VAWKADS--SP---VKAGVE-TT-- 35 usage_03872.pdb 1 NKATLVCTITD---FY-----PGV--VT-VDWKVDG--TP---VTQGME-TT-- 35 usage_04532.pdb 1 NKATLVCTITD---FY-----PGV--VT-VDWKVDG--TP---VTQGME-TT-- 35 usage_04634.pdb 1 SAVAVYSYSCE----L-----EGRDPDI-WHVGFK-----ISWD-IETPGLAIP 38 usage_04650.pdb 1 NKATLVCLISD---FY-----PGA--VT-VAWKADG--SP---VKAGVE-TT-- 35 usage_05070.pdb 1 NKATLVCTITD---FY-----PGV--VT-VDWKVDG--TP---VTQGME-TT-- 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################