################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:40 2021 # Report_file: c_1067_23.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00003.pdb # 2: usage_00005.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00245.pdb # # Length: 47 # Identity: 28/ 47 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 47 ( 91.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 47 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -VKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY--- 43 usage_00005.pdb 1 FVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSS 47 usage_00044.pdb 1 -VKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQ-- 44 usage_00045.pdb 1 -VKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSS 46 usage_00245.pdb 1 LVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSN- 46 VKtSLslLtlNnIVSAPLWDSeankFAGLLTmaDFvNVIkYYy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################