################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:59 2021 # Report_file: c_1363_168.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00287.pdb # 2: usage_00288.pdb # 3: usage_00822.pdb # 4: usage_01103.pdb # 5: usage_01104.pdb # 6: usage_01105.pdb # 7: usage_01157.pdb # 8: usage_01158.pdb # 9: usage_01771.pdb # # Length: 70 # Identity: 0/ 70 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 70 ( 8.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 70 ( 62.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00287.pdb 1 TKEEIEIIEKACEIADKAVMAAIEEIT-----EGKREREVAAKVEYLMKMNG----AEKP 51 usage_00288.pdb 1 TKEEIEIIEKACEIADKAVMAAIEEIT-----EGKREREVAAKVEYLMKMNG----AEKP 51 usage_00822.pdb 1 --------------------GIDDALRAIAGG---MSTKLQAADVACRAG------IDTI 31 usage_01103.pdb 1 TPEEVEKIRLACGIADRGAEHIRRFIQ-----AGMSEREIAAELEWFMRQQG----AEKA 51 usage_01104.pdb 1 TPEEVEKIRLACGIADRGAEHIRRFIQ-----AGMSEREIAAELEWFMRQQG----AEKA 51 usage_01105.pdb 1 -PEEVEKIRLACGIADRGAEHIRRFIQ-----AGMSEREIAAELEWFMRQQG----AEKA 50 usage_01157.pdb 1 -EGEIEKIKQAIEISERAFLETVQQIR-----AGMTEKEIAALLEYTMRKEG----AEGV 50 usage_01158.pdb 1 -EGEIEKIKQAIEISERAFLETVQQIR-----AGMTEKEIAALLEYTMRKEG----AEGV 50 usage_01771.pdb 1 SAEEHVMIRHGARIADIGGAAVVEALG-----DQVPEYEVALHATQAMVRAIADTFEDV- 54 e e aa m usage_00287.pdb 52 -AFDTIIASG 60 usage_00288.pdb 52 -AFDTIIASG 60 usage_00822.pdb 32 I------A-- 33 usage_01103.pdb 52 -SFDTIVASG 60 usage_01104.pdb 52 -SFDTIVASG 60 usage_01105.pdb 51 -SFDTIVASG 59 usage_01157.pdb 51 -AFDTIVASG 59 usage_01158.pdb 51 -AFDTIVASG 59 usage_01771.pdb 55 ------ELMD 58 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################