################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:11:56 2021 # Report_file: c_0194_45.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00004.pdb # 2: usage_00178.pdb # 3: usage_00248.pdb # 4: usage_00249.pdb # 5: usage_00412.pdb # 6: usage_00413.pdb # 7: usage_00459.pdb # 8: usage_00619.pdb # 9: usage_00620.pdb # 10: usage_00621.pdb # 11: usage_00630.pdb # 12: usage_00631.pdb # 13: usage_00637.pdb # 14: usage_00638.pdb # # Length: 178 # Identity: 106/178 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/178 ( 60.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/178 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -------------------------------SLSEREQVLEIVAEEGKGKIKLIAHVGCV 29 usage_00178.pdb 1 -------------------------------SLSEREQVLEIVAEEGKGKIKLIAHVGCV 29 usage_00248.pdb 1 -------------------------------SLSEREQVLEIVAEEAKGKIKLIAHVGCV 29 usage_00249.pdb 1 ---------------------------------SEREQVLEIVAEEAKGKIKLIAHVGCV 27 usage_00412.pdb 1 --------------------------------LSEREQVLEIVAEEAKGKIKLIAHVGCV 28 usage_00413.pdb 1 KASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERAQVLEIVAEEAKGKIKLIAHVGCV 60 usage_00459.pdb 1 ----------------------------------------------AKGKIKLIAHVGCV 14 usage_00619.pdb 1 -------------------------------SLSEREQVLEIVAEEAKGKIKLIAHVGCV 29 usage_00620.pdb 1 -------------------------------SLSEREQVLEIVAEEAKGKIKLIAHVGCV 29 usage_00621.pdb 1 ----------------------------------------------AKGKIKLIAHVGCV 14 usage_00630.pdb 1 -------------------------------SLSEREQVLEIVAEEAKGKIKLIAHVGCV 29 usage_00631.pdb 1 -------------------------------SLSEREQVLEIVAEEAKGKIKLIAHVGCV 29 usage_00637.pdb 1 ----------------------------------------------AKGKIKLIAHVGCV 14 usage_00638.pdb 1 -------------------------------SLSERAQVLEIVAEEAKGKIKLIAHVGCV 29 KGKIKLIAHVGCV usage_00004.pdb 30 TTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00178.pdb 30 TTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00248.pdb 30 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00249.pdb 28 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 87 usage_00412.pdb 29 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 88 usage_00413.pdb 61 STAESQQLAASAKRHGFDAVSAVTPFYYPFSLEEHCDHYRAIIDSADGLPMVVYNIPALS 120 usage_00459.pdb 15 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVANIPALS 74 usage_00619.pdb 30 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00620.pdb 30 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00621.pdb 15 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 74 usage_00630.pdb 30 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00631.pdb 30 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALS 89 usage_00637.pdb 15 STAESQQLAASAKRHGFDAVSAVTPFYYPFSLEEHCDHYRAIIDSADGLPMVVYNIPALS 74 usage_00638.pdb 30 STAESQQLAASAKRHGFDAVSAVTPFYYPFSLEEHCDHYRAIIDSADGLPMVVYNIPALS 89 TAESQQLAASAKR GFDAVSAVTPFYYPFS EEHCDHYRAIIDSADGLPMVVyNIPALS usage_00004.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00178.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00248.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDNIFASGLLAG 147 usage_00249.pdb 88 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 145 usage_00412.pdb 89 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 146 usage_00413.pdb 121 GVKLTLGQIYTLVTLPGVGALKQTSGDLYQMEQIRREHP------------------- 159 usage_00459.pdb 75 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 132 usage_00619.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00620.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00621.pdb 75 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 132 usage_00630.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00631.pdb 90 GVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 usage_00637.pdb 75 GVKLTLGQIYTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 132 usage_00638.pdb 90 GVKLTLGQIYTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAG 147 GVKLTL QI TLVTLPGVGALKQTSGDLYQMEQIRREHP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################