################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:07 2021 # Report_file: c_0587_52.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00046.pdb # 2: usage_00054.pdb # 3: usage_00134.pdb # 4: usage_00219.pdb # # Length: 96 # Identity: 1/ 96 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 96 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 96 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 DFSFV------DLTDPAAFKAAI--RADTK--------MVWIETPTNPMLKLVDIAAIAV 44 usage_00054.pdb 1 TLITV------DFNDLSALKQVVDEQ-QPD--------AALVQHTRQQPQDSYVLADVLA 45 usage_00134.pdb 1 DAIADPAEVAASKPAPDIFIAAA-------HAVGVAPSESIGLED-SQA----GIQAIKD 48 usage_00219.pdb 1 NVSFV------DAAKPEEIRAAM--RPETK--------VVYIETPANPTLSLVDIETVAG 44 v d p aa i usage_00046.pdb 45 IARKHGLLTVVDNTFASPML--QRPLSLGADLVVHS 78 usage_00054.pdb 46 TLRAAGVPALTDDNYAV-K-VARIGCECGANVSTFS 79 usage_00134.pdb 49 S----GA-LPIGV-GRP-E-D-LG---DDIVIVP-- 70 usage_00219.pdb 45 IAHQQGALLVVDNTFMSPYQ---QPLQLGADIVVHS 77 G d ga v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################