################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:22 2021 # Report_file: c_1383_120.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00892.pdb # 4: usage_00922.pdb # 5: usage_00923.pdb # 6: usage_00924.pdb # 7: usage_01366.pdb # 8: usage_01438.pdb # 9: usage_01439.pdb # 10: usage_01460.pdb # # Length: 27 # Identity: 0/ 27 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 27 ( 3.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 27 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 -----SAEFKKLQEDATWKKLNAVKN- 21 usage_00030.pdb 1 -----SAEFKKLQEDATWKKLNAVKN- 21 usage_00892.pdb 1 -----PEMFDGVLNHSIMKRA--QENN 20 usage_00922.pdb 1 -----SAEFKKLQEDATWKKLNAVKN- 21 usage_00923.pdb 1 -----SAEFKKLQEDATWKKLNAVKNN 22 usage_00924.pdb 1 -----SAEFKKLQEDATWKKLNAVKN- 21 usage_01366.pdb 1 -------ALKDLEKNPIWKSLKAVKED 20 usage_01438.pdb 1 DAALVKKTESEWTSSKEWKNLDAVKNN 27 usage_01439.pdb 1 -AALVKKTESEWTSSKEWKNLDAVKNN 26 usage_01460.pdb 1 -----GNLQNDLIHKIQNDN------- 15 k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################