################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:25 2021 # Report_file: c_0653_111.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00349.pdb # 2: usage_00501.pdb # 3: usage_00853.pdb # 4: usage_01445.pdb # 5: usage_01484.pdb # # Length: 63 # Identity: 13/ 63 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 63 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 63 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00349.pdb 1 YMAYLEIVTP--ENHLS-ACSGFLIRRNFVMTAAHCA--GRSITVLLGAHNKKVKEDTWQ 55 usage_00501.pdb 1 -HVAVYR--YT----QY-LCGGVLLDPNWVLTAAHCY--DDNYKVWLGKNNLFKDEPSAQ 50 usage_00853.pdb 1 YMAYLEIVTS--NGPSK-FCGGFLIRRNFVLTAAHCA--GRSITVTLGAHNITEEEDTWQ 55 usage_01445.pdb 1 YMAFVQF--L-QEKSRK-RCGGILVRKDFVLTAAHCQ--GSSINVTLGAHNIKEQERTQQ 54 usage_01484.pdb 1 Q-ISLQY--R-SGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQ 56 CgG L r n V TAAHC V lG hN e t Q usage_00349.pdb 56 KLE 58 usage_00501.pdb 51 HRF 53 usage_00853.pdb 56 KLE 58 usage_01445.pdb 55 FIP 57 usage_01484.pdb 57 YVG 59 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################