################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:10 2021 # Report_file: c_0120_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00003.pdb # 2: usage_00009.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00065.pdb # 6: usage_00083.pdb # # Length: 117 # Identity: 43/117 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/117 ( 82.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/117 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 LVLTQSSSASFSLGASAKLTCTLSSQH-STYTIEWYQQQP-LKPPKYVMELKKDGSHSTG 58 usage_00009.pdb 1 -VLTQSSSASFSLGASAKLTCTLNSQH-STYTIEWYQQQP-LKPPKYVMELKKDGSHSTG 57 usage_00015.pdb 1 LVLTQSSSASFSLGASAKLTCTLSRQH-STYTIEWYQQQP-LKPPRYVMELKKDGSHSTG 58 usage_00016.pdb 1 LVLTQSSSASFSLGASAKLTCTLSRQH-STYTIEWYQQQP-LKPPKFVMELKKDGSHSTG 58 usage_00065.pdb 1 LVLTQSSSASFSLGASAKLTCTLSSQH-STYTIDWYQQQP-LKPPKYVMELRRDGSHNTG 58 usage_00083.pdb 1 -ALTQPTSVSANLGGSVEITCSG----SD-YDYGWYQQKAPGSAPVTVIYW----NDKRP 50 vLTQssSaSfsLGaSaklTCtl s Yti WYQQqp lkpP Vmel sh tg usage_00003.pdb 59 DGIPDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTV-- 113 usage_00009.pdb 58 DGIPDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTV-- 112 usage_00015.pdb 59 DGIPDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 115 usage_00016.pdb 59 DGIPDRFSGSSSGAHRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTV-- 113 usage_00065.pdb 59 DGIPDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 115 usage_00083.pdb 51 SDIPSRFSGSTSGSTSTLTITGVQAEDEAVYYCGAYDGSA--GGGIFGAGTTLTVLG 105 dgIPdRFSGSsSGa ryLsIsniQpEDEAiYiCGvgDtik fvyvFGgGTkvTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################