################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:45 2021 # Report_file: c_0906_86.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_01021.pdb # 2: usage_01022.pdb # 3: usage_01023.pdb # 4: usage_01024.pdb # 5: usage_01025.pdb # 6: usage_01026.pdb # 7: usage_01027.pdb # 8: usage_01028.pdb # 9: usage_01029.pdb # 10: usage_01030.pdb # 11: usage_01031.pdb # 12: usage_01032.pdb # 13: usage_01033.pdb # 14: usage_01060.pdb # # Length: 58 # Identity: 5/ 58 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 58 ( 60.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 58 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01021.pdb 1 -----ATLTGKAIYDGEAVGVRSGSSEFALFQDG----GSIPVYIAQ---DGSYSVS- 45 usage_01022.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALFQDG----GSIPVYIAQ---DGSYSVS- 46 usage_01023.pdb 1 ---PKATLTGKAIYDGEAVGVRSGSSEFALFQ------GSIPVYIAQ---DGSYSVS- 45 usage_01024.pdb 1 ---PKATLTGKAIYDGEAVGVRSGSSEFALFQD-----GSIPVYIAQ---DGSYSVS- 46 usage_01025.pdb 1 -----ATLTGKAIYDGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQ---DGSYSVS- 49 usage_01026.pdb 1 -----ATLTGKAIYDGEAVGVRSGSSEFALFQDG----GSIPVYIAQ---DGSYSVS- 45 usage_01027.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQ---DGSYSVS- 50 usage_01028.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQ---DGSYSVS- 50 usage_01029.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALFQD-----GSIPVYIAQ---DGSYSVS- 45 usage_01030.pdb 1 -----ATLTGKAIYDGEAVGVRSGSSEFALFQD-----GSIPVYIAQ---DGSYSVS- 44 usage_01031.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALFQD-----GSIPVYIAQ---DGSYSVS- 45 usage_01032.pdb 1 FEEPKATLTGKAIYDGEAVGVRSGSSEFALFQD-----GSIPVYIAQ---DGSYSVS- 49 usage_01033.pdb 1 ----KATLTGKAIYDGEAVGVRSGSSEFALF--------SIPVYIAQ---DGSYSVS- 42 usage_01060.pdb 1 -----T-QVPHDDD-ANGV----EPFTSAIAMK-----SGWTWKIPMLGRFGTGYVYS 42 a ltgkaiy geaV gssefAlf sipvyIaq dGsysVs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################