################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 10:38:43 2021 # Report_file: c_1376_31.html ################################################################################################ #==================================== # Aligned_structures: 78 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00007.pdb # 4: usage_00010.pdb # 5: usage_00055.pdb # 6: usage_00059.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00073.pdb # 10: usage_00104.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00126.pdb # 14: usage_00140.pdb # 15: usage_00166.pdb # 16: usage_00167.pdb # 17: usage_00168.pdb # 18: usage_00169.pdb # 19: usage_00173.pdb # 20: usage_00174.pdb # 21: usage_00175.pdb # 22: usage_00176.pdb # 23: usage_00276.pdb # 24: usage_00277.pdb # 25: usage_00325.pdb # 26: usage_00356.pdb # 27: usage_00366.pdb # 28: usage_00393.pdb # 29: usage_00403.pdb # 30: usage_00488.pdb # 31: usage_00490.pdb # 32: usage_00492.pdb # 33: usage_00493.pdb # 34: usage_00533.pdb # 35: usage_00534.pdb # 36: usage_00740.pdb # 37: usage_00741.pdb # 38: usage_00773.pdb # 39: usage_00780.pdb # 40: usage_00791.pdb # 41: usage_00803.pdb # 42: usage_00848.pdb # 43: usage_00868.pdb # 44: usage_00869.pdb # 45: usage_00876.pdb # 46: usage_00937.pdb # 47: usage_00939.pdb # 48: usage_00940.pdb # 49: usage_01001.pdb # 50: usage_01020.pdb # 51: usage_01033.pdb # 52: usage_01036.pdb # 53: usage_01056.pdb # 54: usage_01065.pdb # 55: usage_01066.pdb # 56: usage_01067.pdb # 57: usage_01074.pdb # 58: usage_01094.pdb # 59: usage_01095.pdb # 60: usage_01135.pdb # 61: usage_01141.pdb # 62: usage_01151.pdb # 63: usage_01152.pdb # 64: usage_01153.pdb # 65: usage_01179.pdb # 66: usage_01188.pdb # 67: usage_01194.pdb # 68: usage_01219.pdb # 69: usage_01220.pdb # 70: usage_01222.pdb # 71: usage_01304.pdb # 72: usage_01320.pdb # 73: usage_01321.pdb # 74: usage_01340.pdb # 75: usage_01347.pdb # 76: usage_01356.pdb # 77: usage_01357.pdb # 78: usage_01361.pdb # # Length: 49 # Identity: 26/ 49 ( 53.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 49 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 49 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00002.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00007.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQM- 48 usage_00010.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00055.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQ-- 47 usage_00059.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00066.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00067.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00073.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00104.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQ-- 47 usage_00105.pdb 1 TKHEAEHLFNQDVDAAVHGILHNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00106.pdb 1 --------FNQDVDAAVHGILHNAKLKPVYDSLDAVRRAALINMVFQM- 40 usage_00126.pdb 1 --DEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAAAINMVFQM- 46 usage_00140.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00166.pdb 1 TKDEAEKLFCQDVDAAVRGILRNAKLKPVYDSLDCVRRCALINMVFQM- 48 usage_00167.pdb 1 TKDEAEKLFCQDVDAAVRGILRNAKLKPVYDSLDCVRRCALINMVFQM- 48 usage_00168.pdb 1 TKDEAEKLFCQDVDAAVRGILRNAKLKPVYDSLDCVRRAALINMVFQM- 48 usage_00169.pdb 1 TKDEAEKLFCQDVDAAVRGILRNAKLKPVYDSLDCVRRAALINMVFQM- 48 usage_00173.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00174.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00175.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00176.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00276.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRR-AAINEVFQ-- 45 usage_00277.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRR-AAINEVFQ-- 45 usage_00325.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAMLINMVFQM- 48 usage_00356.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRSALINMVFQ-- 47 usage_00366.pdb 1 -----EKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 43 usage_00393.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRSALINMVFQM- 48 usage_00403.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00488.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00490.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 49 usage_00492.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00493.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 48 usage_00533.pdb 1 TKDEAEKLFNQDVCAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00534.pdb 1 TKDEAEKLFNQDVCAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00740.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00741.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00773.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00780.pdb 1 ---------NQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 40 usage_00791.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00803.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00848.pdb 1 --DEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 46 usage_00868.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00869.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00876.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_00937.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_00939.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_00940.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQ-- 46 usage_01001.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01020.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQM- 48 usage_01033.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01036.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01056.pdb 1 -GDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01065.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01066.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01067.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 48 usage_01074.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01094.pdb 1 -GDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01095.pdb 1 -GDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01135.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQM- 48 usage_01141.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01151.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQ-- 47 usage_01152.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01153.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01179.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMV---- 44 usage_01188.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01194.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01219.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01220.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01222.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01304.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01320.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01321.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINVFQ--- 46 usage_01340.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQM- 48 usage_01347.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 usage_01356.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01357.pdb 1 -KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 47 usage_01361.pdb 1 TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM- 48 QDV AAV GIL NAKLKPVYDSLD VRR a IN v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################