################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:03 2021 # Report_file: c_0136_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00013.pdb # 4: usage_00075.pdb # 5: usage_00076.pdb # # Length: 194 # Identity: 13/194 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/194 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/194 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -RPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLA 58 usage_00004.pdb 1 -RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFS-DAIVFATDVSSKAVEIA 58 usage_00013.pdb 1 NHQTTQLAMLGIERAM--VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAA 57 usage_00075.pdb 1 -----EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFS-DAIVFATDVSSKAVEIA 54 usage_00076.pdb 1 -----EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFS-DAIVFATDVSSKAVEIA 54 e lve al tvaD GTGsGai ak d v AtD s av A usage_00002.pdb 59 QRNAQHLAIK-NIHILQSDWFSALAGQ-Q-FAMIVSNPPYIDEQDP--HLQQGDVRFEPL 113 usage_00004.pdb 59 RKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDV----LFEPP 114 usage_00013.pdb 58 EENAALNGIY-DIALQKTSLLADVDG--K-FDLIVANI---------------------- 91 usage_00075.pdb 55 RKNAERHGVSDRFFVRKGEFLEPFKEKFASI-EILSNPPYVKSSAH---------LFEPP 104 usage_00076.pdb 55 RKNAERHGVSDRFFVRKGEFLEPFKEKFASI-EILSNPPYVKSS-----------LFEPP 102 NA g k l I sNp usage_00002.pdb 114 TALVAADSGMADIVHIIEQSRNALVSGG-FLLLEHGWQQGEAVRQAFILAGYHDV-ETCR 171 usage_00004.pdb 115 EALFGGEDGLDFYREFFGRYD---TSGK-IVLMEIGEDQVEELKKIVS--D---T-VFLK 164 usage_00013.pdb 92 --------LAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQ--IDLKM 141 usage_00075.pdb 105 EALFGGEDGLDFYREFFGRYD---TSGK-IVL-EIGEDQVEELKKIVS--D---T-VFLK 153 usage_00076.pdb 103 EALFGGEDGLDFYREFFGRYD---TSGK-IVL-EIGEDQVEELKKIVS--D---T-VFLK 151 g d sg l eig Q e usage_00002.pdb 172 DYGDNERVTLG--R 183 usage_00004.pdb 165 DSAGKYRFLLLNR- 177 usage_00013.pdb 142 RA-GRWIGLAI-SR 153 usage_00075.pdb 154 DSAGKYRFLLLNR- 166 usage_00076.pdb 152 DSAGKYRFLLLNR- 164 d g r ll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################