################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:40 2021 # Report_file: c_1089_29.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00360.pdb # 2: usage_01305.pdb # 3: usage_01306.pdb # 4: usage_01523.pdb # 5: usage_01524.pdb # 6: usage_01653.pdb # 7: usage_01773.pdb # 8: usage_01774.pdb # 9: usage_01778.pdb # # Length: 57 # Identity: 14/ 57 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 57 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 57 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00360.pdb 1 IYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYP 57 usage_01305.pdb 1 -YGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY- 55 usage_01306.pdb 1 -YGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY- 55 usage_01523.pdb 1 -YGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLG 56 usage_01524.pdb 1 -YGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQV--- 53 usage_01653.pdb 1 -YGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY- 55 usage_01773.pdb 1 -QSYLQDKYKKFMTKKECFNLILNCVKYAMHNDNSSGGLIRIVNITKSFVEEFT--- 53 usage_01774.pdb 1 -QSYLQDKYKKFMTKKECFNLILNCVKYAMHNDNSSGGLIRIVNITKSFVEEFT--- 53 usage_01778.pdb 1 IYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY- 56 Y M K E A D SSGG IR VE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################