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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:29:39 2021
# Report_file: c_0788_57.html
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#====================================
# Aligned_structures: 6
#   1: usage_00265.pdb
#   2: usage_00266.pdb
#   3: usage_00287.pdb
#   4: usage_00295.pdb
#   5: usage_00345.pdb
#   6: usage_00404.pdb
#
# Length:        125
# Identity:       11/125 (  8.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     22/125 ( 17.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           61/125 ( 48.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00265.pdb         1  WASIVNVASIAGETGNVVA---GVAYSASKAGVIGLTKRLAVQLAGYGIRVNAVAPSFVE   57
usage_00266.pdb         1  WASIVNVASIAGETGNVVA---GVAYSASKAGVIGLTKRLAVQLAGYGIRVNAVAPSFVE   57
usage_00287.pdb         1  --SVVFTISNAGFYP-NGG---GPLYTATKHAVVGLVRQMAFELAPHV-RVNGVAPGGMN   53
usage_00295.pdb         1  FGRIITIGS------------GQVNYAAAKAGVIGFSKSLAREVASRGITVNVVAPG---   45
usage_00345.pdb         1  -SAVISTGSIAGHTG-G--GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSP----   52
usage_00404.pdb         1  -GSIVNVGSIVGLKG-N---SGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVH   55
                                   S                Y A K    g     a   a    rvN VaP    

usage_00265.pdb        58  TD-------M------------------LHPLKIILKPEDVAEAILFLADPRRSRGITGH   92
usage_00266.pdb        58  TD-------MTRSFL----R----IAS-LHPLKIILKPEDVAEAILFLADPRRSRGITGH  101
usage_00287.pdb        54  TDLRGPSSLGLSEQSISSVPLADML-KSVLPIGRMPALEEYTGAYVFFATRGDSLPATGA  112
usage_00295.pdb        46  ------------------------------------DAKEIASAVAFLASD-EASYISGE   68
usage_00345.pdb        53  ----------------------------GIPMGRFGTAEEMAPAFLFFASHLASGYITGQ   84
usage_00404.pdb        56  ------------------------K-K-NIPLGRFGETIEVAHAVVFLLE---SPYITGH   86
                                                                    a A  F a    s  itG 

usage_00265.pdb        93  VLSIN   97
usage_00266.pdb       102  VLSIN  106
usage_00287.pdb       113  LLN--  115
usage_00295.pdb        69  TLHVN   73
usage_00345.pdb        85  VLDIN   89
usage_00404.pdb        87  VLVVD   91
                            L   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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