################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:33 2021 # Report_file: c_1082_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00090.pdb # 2: usage_00091.pdb # 3: usage_00108.pdb # 4: usage_00332.pdb # 5: usage_00453.pdb # 6: usage_00457.pdb # 7: usage_00471.pdb # 8: usage_00595.pdb # 9: usage_00596.pdb # 10: usage_00602.pdb # 11: usage_00603.pdb # 12: usage_00879.pdb # # Length: 54 # Identity: 13/ 54 ( 24.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 54 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 54 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDIC-- 52 usage_00091.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDIC-- 52 usage_00108.pdb 1 ------AYQ-EITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDC--- 44 usage_00332.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEI 54 usage_00453.pdb 1 TERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQC-- 52 usage_00457.pdb 1 TERDECAYQ-EITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDC--- 50 usage_00471.pdb 1 VTEGEKSYHEPLVHPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMV-- 52 usage_00595.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDIC-- 52 usage_00596.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDIC-- 52 usage_00602.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVD- 47 usage_00603.pdb 1 ------VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVD- 47 usage_00879.pdb 1 TEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDIC-- 52 Y h P VL GGGDGG RE E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################