################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:47:55 2021 # Report_file: c_0753_54.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00177.pdb # 2: usage_00209.pdb # 3: usage_00210.pdb # 4: usage_00297.pdb # 5: usage_00478.pdb # 6: usage_00479.pdb # 7: usage_00480.pdb # 8: usage_00481.pdb # 9: usage_00517.pdb # 10: usage_00519.pdb # 11: usage_00520.pdb # 12: usage_00521.pdb # 13: usage_00522.pdb # 14: usage_00526.pdb # 15: usage_00527.pdb # 16: usage_00844.pdb # 17: usage_00845.pdb # 18: usage_00846.pdb # 19: usage_00847.pdb # 20: usage_00862.pdb # 21: usage_00863.pdb # 22: usage_00882.pdb # # Length: 51 # Identity: 12/ 51 ( 23.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 51 ( 41.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 51 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 ----VAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFA 47 usage_00209.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00210.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00297.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00478.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00479.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00480.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00481.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00517.pdb 1 ----VALNDLGSVETNAHLLRYDSVHGCFPGTVQVVGDAIDIL-IKV--FA 44 usage_00519.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00520.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 46 usage_00521.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00522.pdb 1 GLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSF- 50 usage_00526.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00527.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00844.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00845.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00846.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00847.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00862.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00863.pdb 1 ----VAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 47 usage_00882.pdb 1 ----VAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLN 47 VA Ndl lAHLlkYD G F G Ve v k f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################