################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:13 2021 # Report_file: c_1052_47.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00030.pdb # 2: usage_00049.pdb # 3: usage_00111.pdb # 4: usage_00298.pdb # 5: usage_00299.pdb # 6: usage_00300.pdb # 7: usage_00301.pdb # 8: usage_00302.pdb # 9: usage_00303.pdb # 10: usage_00389.pdb # 11: usage_00391.pdb # 12: usage_00475.pdb # 13: usage_00476.pdb # 14: usage_00477.pdb # # Length: 81 # Identity: 1/ 81 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 81 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 81 ( 60.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 --IAVHCVA-GL--------------------GRAPVLVALALIEG-GMK-YEDAVQFIR 35 usage_00049.pdb 1 PTIGVHCVA-GL--------------------GRAPILVALALVEYGNVS-ALDAIALIR 38 usage_00111.pdb 1 -SCVAVHCVAGL--------------------GRAPVLVALALIES-G-MKYEDAIQFIR 37 usage_00298.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00299.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00300.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00301.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00302.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00303.pdb 1 --IAVHSVA-GL--------------------GRAPVLVALALIEG-G-K-YEDAVQFIR 34 usage_00389.pdb 1 --ERHTFAS--LDEALLALDDSLTSVAQQNPEITDGAVAFRQKARD-A------------ 43 usage_00391.pdb 1 -CIAVHSVA-GL--------------------GRAPVLVALALIEG-GMK-YEDAVQFIR 36 usage_00475.pdb 1 --VAVHCVA-GL--------------------GRAPVLVALALIEA-GMK-YEDAVQFIR 35 usage_00476.pdb 1 --VAVHCVA-GL--------------------GRAPVLVALALIEC-GMK-YEDAVQFIR 35 usage_00477.pdb 1 --VAVHCVA-GL--------------------GRAPVLVALALIEC-GMK-YEDAVQFIR 35 L grap lvalal e usage_00030.pdb 36 QKR-RG-AFNSKQLLYLEKY- 53 usage_00049.pdb 39 EKR-KG-AINQTQHWITK--- 54 usage_00111.pdb 38 QKR--RGAINSKQLTYLEKYR 56 usage_00298.pdb 35 QKR-RG-AFNSKQLLYLE--- 50 usage_00299.pdb 35 QKR-RG-AFNSKQLLYLE--- 50 usage_00300.pdb 35 QKR-RG-AFNSKQLLYLEK-- 51 usage_00301.pdb 35 QKR-RG-AFNSKQLLYLEKY- 52 usage_00302.pdb 35 QKR-RG-AFNSKQLLYLEK-- 51 usage_00303.pdb 35 QKR-RG-AFNSKQLLYLEK-- 51 usage_00389.pdb 44 ---FT----ELTVAIVSAN-- 55 usage_00391.pdb 37 QKR-RG-AFNSKQLLYLEKY- 54 usage_00475.pdb 36 QKR-RG-AFNSKQLLYLEK-- 52 usage_00476.pdb 36 QKR-RG-AFNSKQLLYLEK-- 52 usage_00477.pdb 36 QKR-RG-AFNSKQLLYLEKY- 53 n q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################