################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:50 2021 # Report_file: c_1142_109.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00241.pdb # 2: usage_00372.pdb # 3: usage_00824.pdb # 4: usage_01396.pdb # 5: usage_01397.pdb # 6: usage_01572.pdb # 7: usage_01574.pdb # 8: usage_01575.pdb # 9: usage_01746.pdb # 10: usage_01830.pdb # 11: usage_02051.pdb # # Length: 55 # Identity: 1/ 55 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 55 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 55 ( 70.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00241.pdb 1 MHHFNCRGEFFYCNTTQLFNN---------------ITLPCKIKQ---------- 30 usage_00372.pdb 1 -HHFNCRGEFFYCNTTQLFNNTCIGMKGCN----GTITLPCKIKQ---------- 40 usage_00824.pdb 1 THSFNCGGEFFYCNSTQLFTW-------------RNITLPCRIKQ---------- 32 usage_01396.pdb 1 THSFNCGGEFFYCNSTQLFTW---------ND--RNITLPCRIKQ---------- 34 usage_01397.pdb 1 THSFNCGGEFFYCNSTQLFTW---------ND--RNITLPCRIKQ---------- 34 usage_01572.pdb 1 THSFNCGGEFFYCNTSGLFQDTI-----SN----ATIMLPCRIKQ---------- 36 usage_01574.pdb 1 THSFNCGGEFFYCNTSGLFNS--------N----GTITLPCRIKQ---------- 33 usage_01575.pdb 1 THSFNCGGEFFYCNTSGLFNS----------------TLPCRIKQ---------- 29 usage_01746.pdb 1 THSFNCGGEFFYCNSTQLFTW---------ND-TRNITLPCRIKQ---------- 35 usage_01830.pdb 1 -YGFLFNDFLLLTQITK----------------------------KVFSPLQYKM 26 usage_02051.pdb 1 THSFNCRGEFFYCNTTKLFNG---------TYNSTTITLPCRIK----------- 35 h Fnc geffycn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################