################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:27 2021 # Report_file: c_1488_56.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00698.pdb # 2: usage_02236.pdb # 3: usage_04558.pdb # 4: usage_04979.pdb # 5: usage_05654.pdb # 6: usage_05655.pdb # 7: usage_05656.pdb # 8: usage_05657.pdb # 9: usage_05674.pdb # 10: usage_08481.pdb # 11: usage_08482.pdb # # Length: 29 # Identity: 0/ 29 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 29 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 29 ( 55.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00698.pdb 1 ---SPVFARLALDDRLLA----PVRDVVN 22 usage_02236.pdb 1 AETMKQTESH---AVKIV----VEAARRL 22 usage_04558.pdb 1 -----QPEIDFYL--SHADQYAVVDGLRD 22 usage_04979.pdb 1 ---SPSFGE--Y-YSHPR----LFWLSQ- 18 usage_05654.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_05655.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_05656.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_05657.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_05674.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_08481.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 usage_08482.pdb 1 ---SDTMRRLATHPRIAA----LAEYLAG 22 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################