################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:05:26 2021 # Report_file: c_0922_35.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00001.pdb # 2: usage_00026.pdb # 3: usage_00130.pdb # 4: usage_00166.pdb # 5: usage_00167.pdb # 6: usage_00221.pdb # 7: usage_00222.pdb # 8: usage_00263.pdb # 9: usage_00293.pdb # 10: usage_00304.pdb # 11: usage_00305.pdb # 12: usage_00329.pdb # 13: usage_00330.pdb # 14: usage_00331.pdb # 15: usage_00643.pdb # 16: usage_00644.pdb # 17: usage_00672.pdb # 18: usage_00697.pdb # 19: usage_00744.pdb # 20: usage_00748.pdb # 21: usage_00816.pdb # 22: usage_00828.pdb # 23: usage_00838.pdb # 24: usage_00856.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 57 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 57 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SQFYSVQVA---DSTFTVLKRYQQLKPIGS----GIVCAAFDTVLGINVAVKK---- 46 usage_00026.pdb 1 ---YSVEVG---DSTFTVLKRYQNLKPI---GAQGIVCAAYDAVLDRNVAIKKLSR- 47 usage_00130.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAVLDRNVAIKKLS-- 50 usage_00166.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAVLDRNVAIKK---- 48 usage_00167.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAVLDRNVAIKK---- 48 usage_00221.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPI------GIVCAAYDAILERNVAIKKLS-- 45 usage_00222.pdb 1 NNFYSVEIG---DSTFTVLKRYQNLKPIG-----GIVCAAYDAILERNVAIKKLSR- 48 usage_00263.pdb 1 --FYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKKL--- 48 usage_00293.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKKL--- 49 usage_00304.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00305.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00329.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKKL--- 49 usage_00330.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKKLS-- 50 usage_00331.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00643.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00644.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00672.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS---GGIVCAAYDAVLDRNVAIKKLS-- 48 usage_00697.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS----GIVCAAYDAVLDRNVAIKKLS-- 47 usage_00744.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-----IVCAAYDAILERNVAIKK---- 44 usage_00748.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGSGA-QGIVCAAYDAVLDRNVAIKKLS-- 50 usage_00816.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAVLDRNVAIKKLS-- 50 usage_00828.pdb 1 -NFYSVEIG---DSTFTVLKRYQNLKPIGS-GAQGIVCAAYDAILERNVAIKK---- 48 usage_00838.pdb 1 -QFYSVEVG---DSTFTVLKRYQNLKPIGS--G-GIVCAAYDAVLDRNVAIKKLS-- 48 usage_00856.pdb 1 -TYLNMK-NYCSVPDIIYELI-------------GIVSHKGTVN-E-GHYIAFCKIS 40 ysv dstftvlkr IVcaa d nvaikk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################