################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:03 2021 # Report_file: c_1368_41.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00051.pdb # 4: usage_00052.pdb # 5: usage_00059.pdb # 6: usage_00294.pdb # 7: usage_00953.pdb # 8: usage_00954.pdb # 9: usage_01209.pdb # 10: usage_01211.pdb # 11: usage_01212.pdb # 12: usage_01213.pdb # 13: usage_01214.pdb # 14: usage_01316.pdb # 15: usage_01318.pdb # 16: usage_01406.pdb # 17: usage_01407.pdb # 18: usage_01408.pdb # 19: usage_01409.pdb # # Length: 62 # Identity: 32/ 62 ( 51.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 62 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 62 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 SQALKFARDFAGDGLVTSWTHEKNWKKAHNILLPSFS----------------------- 37 usage_00022.pdb 1 SQALKFARDFAGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_00051.pdb 1 SQALKFARDFAGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_00052.pdb 1 SQALKFARDFAGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_00059.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFS----------------------- 37 usage_00294.pdb 1 SQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_00953.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_00954.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01209.pdb 1 -QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD---------- 49 usage_01211.pdb 1 SQAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01212.pdb 1 -QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 59 usage_01213.pdb 1 -QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD---------- 49 usage_01214.pdb 1 -QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD---------- 49 usage_01316.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01318.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01406.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01407.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01408.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 usage_01409.pdb 1 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 60 QA KF RDFaGDGL TSWTHEKNWKKAHNILLPSFS usage_00021.pdb -- usage_00022.pdb 61 RL 62 usage_00051.pdb 61 RL 62 usage_00052.pdb 61 RL 62 usage_00059.pdb -- usage_00294.pdb 61 R- 61 usage_00953.pdb 61 RL 62 usage_00954.pdb 61 RL 62 usage_01209.pdb -- usage_01211.pdb 61 RL 62 usage_01212.pdb 60 RL 61 usage_01213.pdb -- usage_01214.pdb -- usage_01316.pdb 61 RL 62 usage_01318.pdb 61 RL 62 usage_01406.pdb 61 RL 62 usage_01407.pdb 61 RL 62 usage_01408.pdb 61 RL 62 usage_01409.pdb 61 RL 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################