################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:01 2021 # Report_file: c_0617_42.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00254.pdb # 4: usage_00264.pdb # 5: usage_00268.pdb # 6: usage_00269.pdb # # Length: 93 # Identity: 12/ 93 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 93 ( 28.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 93 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 --FQRLAEIREVVD--VPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAW 56 usage_00061.pdb 1 --FQRLAEIREVVD--VPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAW 56 usage_00254.pdb 1 --FKEMEEIGLSTG--LPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDV 56 usage_00264.pdb 1 --YERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREK 58 usage_00268.pdb 1 GF--AEEQVRDFTG--VPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREV 56 usage_00269.pdb 1 -F--AEEQVRDFTG--VPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREV 55 vpLVLHG p I G K NV te i av usage_00060.pdb 57 FAENPQGNDPRYYMRVGMDAMKEVVRNKINV-- 87 usage_00061.pdb 57 FAENPQGNDPRYYMRVGMDAMKEVVRNKINVCG 89 usage_00254.pdb 57 LNNDKEVYDPRKYLGPAREAIKETVKGKIKEFG 89 usage_00264.pdb 59 A----GSLPITRLHEEVTNAMQAAVEKIMDMI- 86 usage_00268.pdb 57 LNKDQEVYDPRKFIGPGRDAIKATVIGKIREFG 89 usage_00269.pdb 56 LNKDQEVYDPRKFIGPGRDAIKATVIGKIREFG 88 dpr A k V ki #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################