################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:23 2021 # Report_file: c_1424_88.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00114.pdb # 2: usage_00232.pdb # 3: usage_00248.pdb # 4: usage_00289.pdb # 5: usage_00290.pdb # 6: usage_00338.pdb # 7: usage_00417.pdb # 8: usage_00519.pdb # # Length: 45 # Identity: 10/ 45 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 45 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 45 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 SDVHFQAVARHLSDTLTELGVPPEDITDAMAVVASTRTEVLN--- 42 usage_00232.pdb 1 NGEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGA-PAHKRDVL- 43 usage_00248.pdb 1 -GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGA-PAHKRDVLN 43 usage_00289.pdb 1 -DVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGS-VQHRNDV-- 41 usage_00290.pdb 1 -DVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGS-VQHRNDV-- 41 usage_00338.pdb 1 -GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGA-PAAKRDVLN 43 usage_00417.pdb 1 -DVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGS-VQHRNDVLN 43 usage_00519.pdb 1 -GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGA-PAHKRDV-- 41 HFdA Ae L TL E V dlI ev g d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################