################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:12 2021 # Report_file: c_1270_82.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00134.pdb # 2: usage_00216.pdb # 3: usage_00217.pdb # 4: usage_00218.pdb # 5: usage_00219.pdb # 6: usage_00220.pdb # 7: usage_00221.pdb # 8: usage_00222.pdb # 9: usage_00607.pdb # 10: usage_00794.pdb # 11: usage_00795.pdb # 12: usage_01102.pdb # 13: usage_01103.pdb # 14: usage_01104.pdb # # Length: 27 # Identity: 1/ 27 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 27 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 27 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 GTT---G------INPVYVISQVLGN- 17 usage_00216.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00217.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00218.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00219.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00220.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00221.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00222.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00607.pdb 1 ---RSTGFCPPYVLSWDQQLNLAYVGA 24 usage_00794.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_00795.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_01102.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_01103.pdb 1 GTR---G------INPVYVISQVLGN- 17 usage_01104.pdb 1 GTR---G------INPVYVISQVLGN- 17 G inpvyvisqvlgn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################