################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:58 2021 # Report_file: c_0707_53.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00003.pdb # 2: usage_00017.pdb # 3: usage_00038.pdb # 4: usage_00051.pdb # 5: usage_00093.pdb # 6: usage_00119.pdb # 7: usage_00125.pdb # 8: usage_00233.pdb # 9: usage_00234.pdb # 10: usage_00246.pdb # 11: usage_00263.pdb # 12: usage_00357.pdb # 13: usage_00428.pdb # 14: usage_00453.pdb # 15: usage_00592.pdb # 16: usage_00636.pdb # 17: usage_00663.pdb # 18: usage_00714.pdb # 19: usage_00757.pdb # 20: usage_00784.pdb # 21: usage_00810.pdb # 22: usage_00864.pdb # # Length: 51 # Identity: 34/ 51 ( 66.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 51 ( 80.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 51 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKK--- 48 usage_00017.pdb 1 --YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-- 47 usage_00038.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 50 usage_00051.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-- 49 usage_00093.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-- 49 usage_00119.pdb 1 --YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 48 usage_00125.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 50 usage_00233.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 50 usage_00234.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 50 usage_00246.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR 51 usage_00263.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-- 49 usage_00357.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 50 usage_00428.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK--- 48 usage_00453.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR 51 usage_00592.pdb 1 --YSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS- 48 usage_00636.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKK--- 48 usage_00663.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK--- 48 usage_00714.pdb 1 NFYSVEIGDSTFTVLKRYQNLKPIGSGA-GIVCAAYDAILERNVAIKK--- 47 usage_00757.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-- 49 usage_00784.pdb 1 --YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS- 48 usage_00810.pdb 1 QFYSVEVGDSTFTVLKRYQNLKPIGSG--GIVCAAYDAVLDRNVAIKKLS- 48 usage_00864.pdb 1 --YSVEVGDSTFTVLKRYQNLKPIGSG--GIVCAAYDAVLDRNVAIKKLS- 46 YSVe gDSTFTVLKRYQnLKPIGSG GIVCAAyDa L rNVAiKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################