################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:03 2021 # Report_file: c_0779_15.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00049.pdb # 2: usage_00062.pdb # 3: usage_00156.pdb # 4: usage_00223.pdb # 5: usage_00224.pdb # 6: usage_00225.pdb # 7: usage_00226.pdb # 8: usage_00227.pdb # 9: usage_00228.pdb # 10: usage_00229.pdb # 11: usage_00230.pdb # # Length: 78 # Identity: 42/ 78 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 78 ( 79.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 78 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIE--GLAARMM-SQAMRKL 57 usage_00062.pdb 1 LLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGVGLQARLM-SQALRKM 59 usage_00156.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP----------KAEIESQAMRKL 50 usage_00223.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00224.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00225.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00226.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00227.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00228.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00229.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 usage_00230.pdb 1 LLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTP--------LAARMM-SQAMRKL 51 LLcSQPDTGEQALEIcDaLaRSGAvDvIVvDSVAALtP ar m SQAmRKl usage_00049.pdb 58 AGNLKQSNTLLIFI---- 71 usage_00062.pdb 60 TGALNNSGTTAIFINQLR 77 usage_00156.pdb 51 AGNLKQSNTLLIFINQ-- 66 usage_00223.pdb 52 AGNLKQSNTLLIFIN--- 66 usage_00224.pdb 52 AGNLKQSNTLLIFIN--- 66 usage_00225.pdb 52 AGNLKQSNTLLIFIN--- 66 usage_00226.pdb 52 AGNLKQSNTLLIFI---- 65 usage_00227.pdb 52 AGNLKQSNTLLIFI---- 65 usage_00228.pdb 52 AGNLKQSNTLLIFIN--- 66 usage_00229.pdb 52 AGNLKQSNTLLIFIN--- 66 usage_00230.pdb 52 AGNLKQSNTLLIFIN--- 66 aGnLkqSnTllIFI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################