################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:40 2021 # Report_file: c_1434_144.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00159.pdb # 2: usage_02172.pdb # 3: usage_02177.pdb # 4: usage_02178.pdb # 5: usage_02179.pdb # 6: usage_02366.pdb # 7: usage_02367.pdb # 8: usage_02368.pdb # 9: usage_02369.pdb # 10: usage_02370.pdb # 11: usage_02371.pdb # 12: usage_02373.pdb # 13: usage_02380.pdb # 14: usage_02381.pdb # 15: usage_02382.pdb # 16: usage_02384.pdb # 17: usage_03037.pdb # 18: usage_03038.pdb # 19: usage_03039.pdb # 20: usage_03040.pdb # 21: usage_03041.pdb # 22: usage_03056.pdb # # Length: 112 # Identity: 1/112 ( 0.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/112 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/112 ( 57.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00159.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02172.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02177.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02178.pdb 1 -FYVINFITPCVLISFLAALAFYLPAESGE-----KMSTAICVLLAQAVFLLLTSQRLPE 54 usage_02179.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02366.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02367.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02368.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02369.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02370.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02371.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02373.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02380.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02381.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02382.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_02384.pdb 1 LYFVVNVIIPCLLFSFLTVLVFYLPTDSGE-----KMTLSISVLLSLTVFLLVIVELIPS 55 usage_03037.pdb 1 ----------------LTVLVFYLP---SE-----C-GEKITLCISVLLSLTVFLLLITE 35 usage_03038.pdb 1 ----------IIPCVLITSLAILVFYLPSD-----C-GEKMTLCISVLLALTVFLLLISK 44 usage_03039.pdb 1 ----------IIPCVLITSLAILVFYLPSD-----C-GEKMTLCISVLLALTVFLLLISK 44 usage_03040.pdb 1 ----------------LTVLVFYLP---SE-----C-GEKITLCISVLLSLTVFLLLITE 35 usage_03041.pdb 1 ----------IIPCVLITSLAILVFYLPSD-----C-GEKMTLCISVLLALTVFLLLISK 44 usage_03056.pdb 1 -------SLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTA 53 L l usage_00159.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02172.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02177.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02178.pdb 55 TALAV------PL-IGK---YLMFIMSLVTGVVVNCGIVLNFHFR------- 89 usage_02179.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02366.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02367.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02368.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02369.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02370.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02371.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02373.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02380.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02381.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02382.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_02384.pdb 56 TSSAV------PL-IGK---YMLFTMIFVISSIIVTVVVINTHHR------- 90 usage_03037.pdb 36 IIP---------S----TSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHR 74 usage_03038.pdb 45 IVP---------P----TSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVH-- 81 usage_03039.pdb 45 IVP---------P----TSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVH-- 81 usage_03040.pdb 36 IIP---------S----TSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHR 74 usage_03041.pdb 45 IVP---------P----TSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVH-- 81 usage_03056.pdb 54 T----ELIFFYI-MFEA---TLVPTLIIITRW-------------------- 77 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################