################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:55 2021 # Report_file: c_0811_15.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00178.pdb # 2: usage_00179.pdb # 3: usage_00567.pdb # 4: usage_00568.pdb # 5: usage_00578.pdb # # Length: 64 # Identity: 18/ 64 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 64 ( 28.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 64 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 -DNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKL 59 usage_00179.pdb 1 DDNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKL 60 usage_00567.pdb 1 ----IENWLRLLIQKAIIPVIHLVVEHGIALESHGQN-ILVHKEGLPVRIALKDFHEGLE 55 usage_00568.pdb 1 -----ENWLRLLIQKAIIPVIHLVVEHGIALESHGQN-ILVHKEGLPVRIALKDFHEGLE 54 usage_00578.pdb 1 -DNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKL 59 W PV L HG E H QN LVH G P L DF usage_00178.pdb 60 T--- 60 usage_00179.pdb 61 T--- 61 usage_00567.pdb 56 F--Y 57 usage_00568.pdb 55 F--Y 56 usage_00578.pdb 60 TDD- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################