################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:02 2021 # Report_file: c_1409_43.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00128.pdb # 2: usage_00131.pdb # 3: usage_00417.pdb # 4: usage_00571.pdb # 5: usage_00582.pdb # 6: usage_00695.pdb # 7: usage_00784.pdb # 8: usage_00798.pdb # 9: usage_00831.pdb # 10: usage_00832.pdb # 11: usage_00833.pdb # 12: usage_00888.pdb # 13: usage_00890.pdb # 14: usage_00891.pdb # 15: usage_01081.pdb # 16: usage_01082.pdb # 17: usage_01084.pdb # 18: usage_01165.pdb # 19: usage_01193.pdb # 20: usage_01377.pdb # 21: usage_01421.pdb # 22: usage_01510.pdb # 23: usage_01694.pdb # 24: usage_01731.pdb # # Length: 76 # Identity: 8/ 76 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 76 ( 17.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 76 ( 69.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00128.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00131.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00417.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00571.pdb 1 ---TRKIAELIYKEFFSQEKAMGNRPMEM---------------MDR-EKAYIPELQISF 41 usage_00582.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00695.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00784.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00798.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00831.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00832.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00833.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00888.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00890.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_00891.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01081.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01082.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01084.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01165.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKRDEVPQGQLGF 48 usage_01193.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01377.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01421.pdb 1 WPVTKLTANDIYAEFWAE-----------GD---------PIPMMDR-KKDEVPQGQLGF 39 usage_01510.pdb 1 WPVTKLTANDIYAEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 48 usage_01694.pdb 1 ------------AEFWAE-----------GDEMKKL-GIQPIPMMDRDKKDEVPQGQLGF 36 usage_01731.pdb 1 WPIQQRIAELVATEFWEQ-----------GDLERTVLQQQPIPMMDRNKRDELPKLQVGF 49 EFw MDR k de P Q gF usage_00128.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00131.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00417.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00571.pdb 42 MEHIAMPIYKLLQDLF 57 usage_00582.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00695.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00784.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00798.pdb 49 YNAVAIPCYTTLTQIL 64 usage_00831.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00832.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00833.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00888.pdb 49 YNAVAIPCYTTLTQI- 63 usage_00890.pdb 49 YNAV------------ 52 usage_00891.pdb 49 YNA------------- 51 usage_01081.pdb 49 YNA------------- 51 usage_01082.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01084.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01165.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01193.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01377.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01421.pdb 40 YNAVAIPCYTTLTQI- 54 usage_01510.pdb 49 YNAVAIPCYTTLTQI- 63 usage_01694.pdb 37 YNAVAIPCYTTLTQI- 51 usage_01731.pdb 50 ID-------------- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################