################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:13 2021 # Report_file: c_1113_81.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00062.pdb # 2: usage_00413.pdb # 3: usage_00453.pdb # 4: usage_00525.pdb # 5: usage_00878.pdb # 6: usage_00880.pdb # 7: usage_00881.pdb # 8: usage_00902.pdb # 9: usage_00903.pdb # 10: usage_00904.pdb # 11: usage_00905.pdb # # Length: 74 # Identity: 39/ 74 ( 52.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 74 ( 52.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 74 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 -----SKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 55 usage_00413.pdb 1 -----SKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 55 usage_00453.pdb 1 DSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 60 usage_00525.pdb 1 -----SKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 55 usage_00878.pdb 1 DSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 60 usage_00880.pdb 1 -----SKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 55 usage_00881.pdb 1 -----SKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIR 55 usage_00902.pdb 1 -AISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQL 59 usage_00903.pdb 1 -AISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQL 59 usage_00904.pdb 1 -AISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQL 59 usage_00905.pdb 1 -AISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQL 59 SKGASV RMLS FL ED FK GLASYLH FAYQNT YL LW HLQ AV usage_00062.pdb 56 LPDTVRAIMDRWTL 69 usage_00413.pdb 56 LPDTVRAIMDRWTL 69 usage_00453.pdb 61 LPDTVRAIMDRWTL 74 usage_00525.pdb 56 LPDTVRAIMDRWTL 69 usage_00878.pdb 61 LPDTVRAIMDRWTL 74 usage_00880.pdb 56 LPDTVRAIMDRWTL 69 usage_00881.pdb 56 LPDTVRAIMDRWTL 69 usage_00902.pdb 60 PTTVRDIMNRW-T- 71 usage_00903.pdb 60 PTTVRDIMNRW-T- 71 usage_00904.pdb 60 PTTVRDIMNRW-T- 71 usage_00905.pdb 60 PTTVRDIMNRW-T- 71 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################