################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:30 2021 # Report_file: c_0174_24.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00013.pdb # 2: usage_00181.pdb # 3: usage_00182.pdb # 4: usage_00183.pdb # 5: usage_00186.pdb # 6: usage_00220.pdb # 7: usage_00221.pdb # 8: usage_00290.pdb # 9: usage_00492.pdb # # Length: 176 # Identity: 35/176 ( 19.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/176 ( 42.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/176 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -TKIMGILNVTP----------------NVESAVTRVKAMMDEGADIIDVGGVSTMITVE 43 usage_00181.pdb 1 --LIMGILN--------D-GGSYN----EVDAAVRHAKEMRDEGAHIIDIGG-----SVE 40 usage_00182.pdb 1 --LIMGILNVTP--DS-F-GGSYN----EVDAAVRHAKEMRDEGAHIIDIGG-----SVE 45 usage_00183.pdb 1 PVQVMGVLNVTD--DSFSDG----GCYLDLDDAVKHGLAMAAAGAGIVDVGG-------- 46 usage_00186.pdb 1 --LIMGILNVTP--S--D-GGSYN----EVDAAVRHAKEMRDEGAHIIDIGGEST-VSVE 48 usage_00220.pdb 1 -TLIMGILNVTP--DSFSDGGSYN----EVDAAVRHAKEMRDEGAHIIDIG------SVE 47 usage_00221.pdb 1 --LIMGILNVTP-----D-GGSYN----EVDAAVRHAKEMRDEGAHIIDIG------SVE 42 usage_00290.pdb 1 --LIMGILNVTPFS---D-GGSYN----EVDAAVRHAKEMRDEGAHIIDIGG----VSVE 46 usage_00492.pdb 1 --LIMGILN------------SYN----EVDAAVRHAKEMRDEGAHIIDIG------SVE 36 iMGiLN vd AV h k M deGA IiD G usage_00013.pdb 44 EELNRVLPVVEAIVG-FDVKISVDTFRSEVAEACLKLGVDIINDQWAGLYDHRMFQVVAK 102 usage_00181.pdb 41 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 100 usage_00182.pdb 46 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 105 usage_00183.pdb 47 -ETSRVIPVVKELAA-QGITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAE 104 usage_00186.pdb 49 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 108 usage_00220.pdb 48 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 107 usage_00221.pdb 43 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 102 usage_00290.pdb 47 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 106 usage_00492.pdb 37 EEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAH 96 E RV P a iSiDT aeVA a Ga iiND wg a p v A usage_00013.pdb 103 YDAEIVLMHNGN--------GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP 150 usage_00181.pdb 101 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 148 usage_00182.pdb 106 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 153 usage_00183.pdb 105 ADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDP 160 usage_00186.pdb 109 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 156 usage_00220.pdb 108 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILNP 155 usage_00221.pdb 103 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILNP 150 usage_00290.pdb 107 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 154 usage_00492.pdb 97 YDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 144 yDvpi LMHnr y n a m adL s Ak AGv i L P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################