################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:33 2021 # Report_file: c_1319_139.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00221.pdb # 2: usage_00732.pdb # 3: usage_01030.pdb # 4: usage_01274.pdb # 5: usage_01275.pdb # 6: usage_01276.pdb # 7: usage_01277.pdb # 8: usage_01278.pdb # 9: usage_01279.pdb # 10: usage_01280.pdb # 11: usage_01281.pdb # 12: usage_01282.pdb # 13: usage_01283.pdb # 14: usage_01284.pdb # 15: usage_02264.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 42 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 42 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00221.pdb 1 -H-Y-NCVSSGGQCLYSACPIFTRIQGTC----YRGRARCCR 35 usage_00732.pdb 1 GSDEASCPVLT-------CGPASFQCNSSTCIP--------- 26 usage_01030.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTKIQGTC----YRGKAKCCK 36 usage_01274.pdb 1 DH-Y-ACVSSGGQCLYSACPIFTKIQGTC----YRGKAKCCK 36 usage_01275.pdb 1 DH-Y-NCVSAGGQCLYSACPIFTKIQGTC----YRGKAKCCK 36 usage_01276.pdb 1 DH-Y-NCVSAGGQCLYSACPIFTKIQGTC----YRGKAKCCK 36 usage_01277.pdb 1 DH-Y-NCVSSGGQCAYSACPIFTKIQGTC----YRGKAKCCK 36 usage_01278.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTEIQGTC----YRGKAKCCK 36 usage_01279.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTEIQGTC----YRGKAKCCK 36 usage_01280.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTKIAGTC----YRGKAKCCK 36 usage_01281.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTKIEGTC----YRGKAKCCK 36 usage_01282.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTKIEGTC----YRGKAKCCK 36 usage_01283.pdb 1 -H-Y-NCVSSGGQCLYSACPIFTKIQGTC----YRGAAKCCK 35 usage_01284.pdb 1 -H-Y-NCVSSGGQCLYSACPIFTKIQGTC----YRGEAKCCK 35 usage_02264.pdb 1 DH-Y-NCVSSGGQCLYSACPIFTKIQGTC----YRGKAKCCK 36 h y Cvs g Cpift i gtc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################