################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:07 2021 # Report_file: c_0961_19.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00086.pdb # 4: usage_00100.pdb # 5: usage_00125.pdb # 6: usage_00132.pdb # 7: usage_00133.pdb # 8: usage_00156.pdb # 9: usage_00211.pdb # 10: usage_00212.pdb # 11: usage_00246.pdb # 12: usage_00287.pdb # 13: usage_00309.pdb # 14: usage_00438.pdb # 15: usage_00439.pdb # 16: usage_00441.pdb # 17: usage_00442.pdb # # Length: 59 # Identity: 2/ 59 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 59 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 59 ( 59.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00052.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00086.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 38 usage_00100.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00125.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 38 usage_00132.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVK---------------- 38 usage_00133.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVK---------------- 38 usage_00156.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00211.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 38 usage_00212.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 38 usage_00246.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRAAV-G-NKMFVKG--------------- 38 usage_00287.pdb 1 -MKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 38 usage_00309.pdb 1 -------------IMDPTSLAETQEDHNGGQK-QLSPQKVTLYLRPGQAAAFNVTFRRA 45 usage_00438.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00439.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00441.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 usage_00442.pdb 1 LMKKEFTLEFSRD---RKSMSVYCSPAKSSRA-AVG-NKMFVKG--------------- 39 rkSmsvycspakssra g nKmfvk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################