################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:56 2021 # Report_file: c_1411_31.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00293.pdb # 2: usage_00300.pdb # 3: usage_00301.pdb # 4: usage_00303.pdb # 5: usage_00304.pdb # 6: usage_00306.pdb # 7: usage_00326.pdb # 8: usage_00447.pdb # 9: usage_00509.pdb # 10: usage_00510.pdb # 11: usage_00605.pdb # 12: usage_01155.pdb # # Length: 70 # Identity: 17/ 70 ( 24.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 70 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 70 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00293.pdb 1 -----------LQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALDKIEEEQNKSK 49 usage_00300.pdb 1 -SEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQ---- 55 usage_00301.pdb 1 ----CRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSK 56 usage_00303.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQ---- 56 usage_00304.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSK 60 usage_00306.pdb 1 -----------LQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQN--- 46 usage_00326.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEE----- 55 usage_00447.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSK 60 usage_00509.pdb 1 SKEGCQKILTVLDPMVPTGSENLKSLFNTVCVIWCIHAEEKVKDTEGAKQIVRRHLVAET 60 usage_00510.pdb 1 SKEGCQKILTVLDPMVPTGSENLKSLFNTVCVIWCIHAEEKVKDTEGAKQIVRRHLVAET 60 usage_00605.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSK 60 usage_01155.pdb 1 TSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSK 60 L P TGSE L SL NT v C H vKDT A usage_00293.pdb 50 K--------- 50 usage_00300.pdb ---------- usage_00301.pdb 57 KKAQ------ 60 usage_00303.pdb ---------- usage_00304.pdb 61 KKA------- 63 usage_00306.pdb ---------- usage_00326.pdb ---------- usage_00447.pdb 61 KKAQQAAADT 70 usage_00509.pdb 61 GTAEK----- 65 usage_00510.pdb 61 G--------- 61 usage_00605.pdb 61 KKAQQAAAD- 69 usage_01155.pdb 61 KKAQQAAA-- 68 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################