################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:53 2021 # Report_file: c_0314_41.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # 6: usage_00027.pdb # 7: usage_00125.pdb # 8: usage_00126.pdb # 9: usage_00127.pdb # 10: usage_00289.pdb # 11: usage_00429.pdb # 12: usage_00485.pdb # 13: usage_00540.pdb # 14: usage_00570.pdb # # Length: 122 # Identity: 38/122 ( 31.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/122 ( 42.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/122 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 RTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSQKIIK 60 usage_00022.pdb 1 -----------NKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSQKIIK 49 usage_00024.pdb 1 -TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIR 59 usage_00025.pdb 1 -TLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVK 59 usage_00026.pdb 1 RTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVK 60 usage_00027.pdb 1 -----------NRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVK 49 usage_00125.pdb 1 -TLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 59 usage_00126.pdb 1 -----------NKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 49 usage_00127.pdb 1 -----------NKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 49 usage_00289.pdb 1 -----------NKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIK 49 usage_00429.pdb 1 -TLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVK 59 usage_00485.pdb 1 -TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIR 59 usage_00540.pdb 1 -TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIR 59 usage_00570.pdb 1 -MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVK 59 N FkdK VLDVG GtGIL mfaAk GA V g s i usage_00021.pdb 61 ANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLM 120 usage_00022.pdb 50 ANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLM 109 usage_00024.pdb 60 LNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSV 119 usage_00025.pdb 60 ANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 119 usage_00026.pdb 61 ANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYQSMLNTVLHARDKWLAPDGLI 120 usage_00027.pdb 50 ANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 109 usage_00125.pdb 60 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLI 119 usage_00126.pdb 50 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLI 109 usage_00127.pdb 50 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLI 109 usage_00289.pdb 50 ANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLM 109 usage_00429.pdb 60 ANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 119 usage_00485.pdb 60 LNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSV 119 usage_00540.pdb 60 LNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSV 119 usage_00570.pdb 60 ANNLDHIVEVIEGSVEDISL-PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVM 118 N t Gk E v L KVD IISEWMGY L eSM V A L G usage_00021.pdb 121 FP 122 usage_00022.pdb 110 FP 111 usage_00024.pdb 120 Y- 120 usage_00025.pdb 120 FP 121 usage_00026.pdb 121 FP 122 usage_00027.pdb 110 F- 110 usage_00125.pdb 120 FP 121 usage_00126.pdb 110 FP 111 usage_00127.pdb 110 FP 111 usage_00289.pdb 110 FP 111 usage_00429.pdb 120 FP 121 usage_00485.pdb 120 Y- 120 usage_00540.pdb 120 Y- 120 usage_00570.pdb 119 YP 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################