################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:39 2021 # Report_file: c_0756_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00107.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00184.pdb # 5: usage_00187.pdb # 6: usage_00269.pdb # # Length: 96 # Identity: 28/ 96 ( 29.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/ 96 ( 76.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 96 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 DWVNVMAYDFHGSWENFTGAPAALRD-----------FTASVGIESFLAAGMPPEKLVLG 49 usage_00109.pdb 1 DWVNVMAYDFHGSWENFTGAPAALRD-SK--------FTASVGIESFLAAGMPPEKLVLG 51 usage_00110.pdb 1 DWVNVMAYDFHGSWENFTGAPAALRD-SK--------FTASVGIESFLAAGMPPEKLVLG 51 usage_00184.pdb 1 DWVNVMAYDFHGSWENFTGAPAALRDPSK--------FTASVGIESFLAAGMPPEKLVLG 52 usage_00187.pdb 1 DFWNLMAYDYAGSFSSLSGHQANVYND--TSNPLSTPFNTQTALDLYRAGGVPANKIVLG 58 usage_00269.pdb 1 DWVNVMAYDFHGSWENFTGAPAALRD-SK--------FTASVGIESFLAAGMPPEKLVLG 51 DwvNvMAYDfhGSwenftGapAalrd FtasvgiesflAaGmPpeKlVLG usage_00107.pdb 50 IPLFGRSWLLKNNNEVGIGAPAVGAGPV-------- 77 usage_00109.pdb 52 IPLFGRSWLLKNNNEVGIGAPAVGAGPV-------- 79 usage_00110.pdb 52 IPLFGRSWLLKNNNEVGIGAPAVGAGPV-------- 79 usage_00184.pdb 53 IPLFGRSWLLKNNNEVGIGAPAVGAGPV-------- 80 usage_00187.pdb 59 MPLYGRSFAN----TDGPGKPYNGVGQGSWENGVWD 90 usage_00269.pdb 52 IPLFGRSWLLKNNNEVGIGAPAVGAGPV-------- 79 iPLfGRSwll evGiGaPavGaGpv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################