################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:16 2021 # Report_file: c_0784_44.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00197.pdb # 2: usage_00278.pdb # 3: usage_00279.pdb # 4: usage_00631.pdb # 5: usage_00832.pdb # 6: usage_00926.pdb # 7: usage_00927.pdb # 8: usage_00973.pdb # 9: usage_00993.pdb # 10: usage_00994.pdb # # Length: 103 # Identity: 12/103 ( 11.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/103 ( 21.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/103 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00197.pdb 1 -PFFSMGGSSFIEMFVGL---GASRVRDLFETAKKQAPSIIFIDEIDAIGK--------- 47 usage_00278.pdb 1 -PFISVSGSDFVEMFVGV---GAARVRDLFETAKKHAPCMIFIDEIDAVGR--------- 47 usage_00279.pdb 1 -PFISVSGSDFVEMFVGV---GAARVRDLFETAKKHAPCMIFIDEIDAVGR--------- 47 usage_00631.pdb 1 -TFFSISSSD--------LVSSEKLVKNLFQLARENKPSIIFIDEIDS------------ 39 usage_00832.pdb 1 -NFIFSPASGIVDKYIGE---SARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 56 usage_00926.pdb 1 ---ITASGSDFVEMFVGV---GAARVRDLFETAKRHAPCIVFIDEIDAVGRK-------- 46 usage_00927.pdb 1 ---ITASGSDFVEMFVGV---GAARVRDLFETAKRHAPCIVFIDEIDAVGRK-------- 46 usage_00973.pdb 1 AAFIRVVGSEFVQKYLGE---GPRMVRDVFRLAKENAPAIIFIDEIDAIATKRF---DAQ 54 usage_00993.pdb 1 ---ITASGSDFVEMFVGV---GAARVRDLFETAKRHAPCIVFIDEIDAVGRK-------- 46 usage_00994.pdb 1 ---ITASGSDFVEMFVGV---GAARVRDLFETAKRHAPCIVFIDEIDAVGRK-------- 46 S vr F Ak P FiDEiDa usage_00197.pdb 48 -ND---EREQ---TLNQLLAEMDG---FGSEN-APVIVLAATN 79 usage_00278.pdb 48 --DE---REQ---TLNQLLVEMDGF-D---TS-DGIIVIAATN 77 usage_00279.pdb 48 --DE---REQ---TLNQLLVEMDGF-D---TS-DGIIVIAATN 77 usage_00631.pdb 40 ----SEAARR---IKTEFLVQMQG---VGVD-NDGILVLGATN 71 usage_00832.pdb 57 D-RE---IQR---TLMELLTQMDGFDN-----LGQTKIIMATN 87 usage_00926.pdb 47 N-DE---REQ---TLNQLLVEMDGF-E---KD-TAIVVMAA-- 75 usage_00927.pdb 47 N-DE---REQ---TLNQLLVEMDGF-E---KD-TAIVVMAA-- 75 usage_00973.pdb 55 T-GA---DREVQRILLELLNQMDGF-D---QN-VNVKVIMATN 88 usage_00993.pdb 47 N-DE---REQ---TLNQLLVEMDGF-E---KD-TAIVVMAATN 77 usage_00994.pdb 47 N-DE---REQ---TLNQLLVEMDGF-E---KD-TAIVVMAATN 77 l lL MdG v A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################