################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:04 2021 # Report_file: c_0462_69.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00290.pdb # 2: usage_00291.pdb # 3: usage_00298.pdb # 4: usage_00299.pdb # 5: usage_00300.pdb # 6: usage_00381.pdb # 7: usage_00443.pdb # 8: usage_00444.pdb # 9: usage_00445.pdb # 10: usage_00446.pdb # 11: usage_00708.pdb # 12: usage_00826.pdb # 13: usage_00827.pdb # # Length: 130 # Identity: 7/130 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/130 ( 27.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/130 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00290.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 45 usage_00291.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 45 usage_00298.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----GT-GTAL 46 usage_00299.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----GTGGTAL 47 usage_00300.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----GT-GTAL 46 usage_00381.pdb 1 -KTQLICF--P-FA------GGYSASFRPLHAFLQGECEMLAAEP-PG-----------H 38 usage_00443.pdb 1 RAVLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 45 usage_00444.pdb 1 --VLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 43 usage_00445.pdb 1 --VLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 43 usage_00446.pdb 1 --VLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G--GTAL 43 usage_00708.pdb 1 -PTLFCFHPASG---FAWQFSVLSRYLDP-------QWSIIGIQSPRPNGPMQ------- 42 usage_00826.pdb 1 --VLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G---TAL 42 usage_00827.pdb 1 --VLVGCTGTA-ANGGPHEFLRLSTSFQE-------ERDFLAVPL-PGY----G---TAL 42 l c lS sf e la pg usage_00290.pdb 46 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 94 usage_00291.pdb 46 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 94 usage_00298.pdb 47 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 95 usage_00299.pdb 48 LPADLDTALDAQARAILRAAG----------DAPVVLLGHAGG-ALLAHELAFRLERAHG 96 usage_00300.pdb 47 LPADLDTALDAQARAILRAAG----------DAPVVLLGHAGG-ALLAHELAFRLERAHG 95 usage_00381.pdb 39 GTNQTS-A----IEDLEELTDLYKQELNLRPDRPFVLFGHSM-GGMITFRLAQKLEREGI 92 usage_00443.pdb 46 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 94 usage_00444.pdb 44 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 92 usage_00445.pdb 44 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 92 usage_00446.pdb 44 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 92 usage_00708.pdb 43 TAANLDEVCEAHLATLLEQQP----------HGPYYLLGYSLG-GTLAQGIAARLRA-RG 90 usage_00826.pdb 43 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 91 usage_00827.pdb 43 LPADLDTALDAQARAILRAAG----------DAPVVLLGHSGG-ALLAHELAFRLERAHG 91 a ld a l d P vLlGh la lA rLer g usage_00290.pdb 95 APPAGIVLVD 104 usage_00291.pdb 95 APPAGIVLVD 104 usage_00298.pdb 96 APPAGIVLVD 105 usage_00299.pdb 97 APPAGIVLVD 106 usage_00300.pdb 96 APPAGIVLVD 105 usage_00381.pdb 93 FPQAVIISA- 101 usage_00443.pdb 95 APPAGIVLVD 104 usage_00444.pdb 93 APPAGIVLVD 102 usage_00445.pdb 93 APPAGIVLVD 102 usage_00446.pdb 93 APPAGIVLVD 102 usage_00708.pdb 91 EQVAFLGLLD 100 usage_00826.pdb 92 APPAGIVLVD 101 usage_00827.pdb 92 APPAGIVLVD 101 p A i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################