################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:03 2021 # Report_file: c_0736_39.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00049.pdb # 2: usage_00076.pdb # 3: usage_00085.pdb # 4: usage_00092.pdb # 5: usage_00351.pdb # 6: usage_00352.pdb # 7: usage_00459.pdb # 8: usage_00631.pdb # 9: usage_00651.pdb # 10: usage_00669.pdb # # Length: 54 # Identity: 7/ 54 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 54 ( 20.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 54 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 LV--QSGGGVVQPGRSLKLSCLASGYIFT-SSWINWVKQRPGRGLEWIGRIDPS 51 usage_00076.pdb 1 ------GAELVKPGASVKLSCKASGYTFT-SYWMHWVKQRPGQGLEWIGMIHPH 47 usage_00085.pdb 1 --------GVKKPGASVRVSCWTSEDIFERTELIHWVRQAPGQGLEWIGWVKTV 46 usage_00092.pdb 1 --LVQSGSGVKKPGASVRVSCWTSEDIFERTELIHWVRQAPGQGLEWIGWVKTV 52 usage_00351.pdb 1 --------GLVQAGGSLRLSCAASERTFS-RYPVAWFRQAPGAEREFVAVIS-- 43 usage_00352.pdb 1 --------GLVQAGGSLRLSCAASERTFS-RYPVAWFRQAPGAEREFVAVIS-- 43 usage_00459.pdb 1 --LQQSGPELVKPGASVKMSCKASGYTFS-TSVIHWVKQKPGQGLEWIGYIFPY 51 usage_00631.pdb 1 -------AEVKKPGSSVKVSCTSSEVTFS-SFAISWVRQAPGQGLEWLGGISPM 46 usage_00651.pdb 1 ------GPELKKPGKTVKISCKASDYTFT-DYSLHWVKQAPGKGLKWMGWINTE 47 usage_00669.pdb 1 ------GPELVKPGASVKISCAASAYSIT-DFTIYWVKQSHGDSLEWIGGIDPH 47 G s SC S f W Q pG e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################