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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:18:17 2021
# Report_file: c_1027_2.html
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#====================================
# Aligned_structures: 10
#   1: usage_00012.pdb
#   2: usage_00086.pdb
#   3: usage_00109.pdb
#   4: usage_00110.pdb
#   5: usage_00111.pdb
#   6: usage_00220.pdb
#   7: usage_00254.pdb
#   8: usage_00447.pdb
#   9: usage_00508.pdb
#  10: usage_00509.pdb
#
# Length:         64
# Identity:       33/ 64 ( 51.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/ 64 ( 57.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/ 64 ( 42.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00012.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG   59
usage_00086.pdb         1  A--VLCHLGALTNRPVVEALTKRKITAYA-EL-PRISRAQS-DILSSQSNLAGYRAVIDG   55
usage_00109.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDG   59
usage_00110.pdb         1  --VLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMD-----------------   41
usage_00111.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILASQSNLAGYRAVIDG   59
usage_00220.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG   59
usage_00254.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMD-----------------   42
usage_00447.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMN-----------------   42
usage_00508.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG   59
usage_00509.pdb         1  -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG   59
                              lmCHLGALTNRPVVEALTKRKITAYA EL PrISRAQS d                 

usage_00012.pdb        60  AY--   61
usage_00086.pdb        56  AYE-   58
usage_00109.pdb        60  AY--   61
usage_00110.pdb            ----     
usage_00111.pdb        60  AYE-   62
usage_00220.pdb        60  AY--   61
usage_00254.pdb            ----     
usage_00447.pdb            ----     
usage_00508.pdb        60  AYEF   63
usage_00509.pdb        60  AYEF   63
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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