################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:06 2021 # Report_file: c_1434_110.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01126.pdb # 2: usage_01244.pdb # 3: usage_03200.pdb # 4: usage_03201.pdb # 5: usage_03372.pdb # 6: usage_03373.pdb # 7: usage_03374.pdb # 8: usage_03375.pdb # # Length: 73 # Identity: 20/ 73 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 73 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 73 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01126.pdb 1 -PVESVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEA 59 usage_01244.pdb 1 -VGISMTSGLNAMAHAAEALYARDRNPIASMMAVEGLRAMIEALPGVRMEPQDTKARETA 59 usage_03200.pdb 1 --VAISTSGLNA-AHAAEALYARDRNPI-AS-AVEGLRA-IEALPVVRQAPHDIGARETA 54 usage_03201.pdb 1 -PVAISTSGLNA-AHAAEALYARDRNPI-AS-AVEGLRA-IEALPVVRQAPHDIGARETA 55 usage_03372.pdb 1 PRGLSVTSALNAIAHAAEGLYARDANPV-SL-AEEGIRALAAGIPAVFNDPADLDARSQC 58 usage_03373.pdb 1 PRGLSVTSALNAIAHAAEGLYARDANPV-SL-AEEGIRALAAGIPAVFNDPADLDARSQC 58 usage_03374.pdb 1 PRGLSVTSALNAIAHAAEGLYARDANPV-SL-AEEGIRALAAGIPAVFNDPADLDARSQC 58 usage_03375.pdb 1 PRGLSVTSALNAIAHAAEGLYARDANPV-SL-AEEGIRALAAGIPAVFNDPADLDARSQC 58 tS LNa AHaae Lyard nP A EG RA P v P d aR usage_01126.pdb 60 LYGAYLAAVSFAS 72 usage_01244.pdb 60 LYGAWLCGTVLGA 72 usage_03200.pdb 55 LYGAWLCGTVLGA 67 usage_03201.pdb 56 LYGAWLCGTVLGA 68 usage_03372.pdb 59 LYGAWLCGTVLGG 71 usage_03373.pdb 59 LYGAWLCGTVLG- 70 usage_03374.pdb 59 LYGAWLCGTVLGG 71 usage_03375.pdb 59 LYGAWLCGTVLGG 71 LYGAwLcgtvlg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################