################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:42 2021 # Report_file: c_1004_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00020.pdb # 2: usage_00045.pdb # 3: usage_00154.pdb # 4: usage_00193.pdb # 5: usage_00333.pdb # 6: usage_00334.pdb # 7: usage_00342.pdb # # Length: 59 # Identity: 18/ 59 ( 30.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 59 ( 62.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 59 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 ---GIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKD 56 usage_00045.pdb 1 ---GIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKD 56 usage_00154.pdb 1 -NVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLH 58 usage_00193.pdb 1 RLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE---- 55 usage_00333.pdb 1 ---GIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIV-- 54 usage_00334.pdb 1 ---GIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIV-- 54 usage_00342.pdb 1 ---GIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIV-- 54 giIfK GDDLRQdmL lQ l m siWe E ldL PYgc tgd GmIE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################