################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:42 2021 # Report_file: c_1089_46.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01004.pdb # 2: usage_01317.pdb # 3: usage_01318.pdb # 4: usage_01706.pdb # 5: usage_01707.pdb # 6: usage_01775.pdb # # Length: 74 # Identity: 25/ 74 ( 33.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 74 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 74 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01004.pdb 1 QDRYVKKLAEWVAIQSVS-A-WPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDG 58 usage_01317.pdb 1 QDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQL--G 58 usage_01318.pdb 1 QDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQL--Q 58 usage_01706.pdb 1 QDRYVKKLAEWVAIQSVS-A-WPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDG 58 usage_01707.pdb 1 QDRYVKKLAEWVAIQSVS-A-WPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDG 58 usage_01775.pdb 1 -DRYIKKLAKWVAIQSVS-A-WPEKRGEIRRMMEVAAADVKQLGGSVELVDIGKQKLPDG 57 D v L eWVAI S S P R E RMM VAA qrLG V VD G Q L g usage_01004.pdb 59 SEIP---------- 62 usage_01317.pdb 59 QSL-P--------- 62 usage_01318.pdb 59 SLP-IPPVILAELG 71 usage_01706.pdb 59 SEIP---------- 62 usage_01707.pdb 59 SEIP---------- 62 usage_01775.pdb 58 SEIPLPPILLGRLG 71 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################