################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:41 2021 # Report_file: c_0120_5.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00039.pdb # 2: usage_00046.pdb # 3: usage_00054.pdb # 4: usage_00064.pdb # 5: usage_00084.pdb # 6: usage_00086.pdb # 7: usage_00088.pdb # 8: usage_00100.pdb # # Length: 117 # Identity: 31/117 ( 26.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/117 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/117 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 EV--EQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSS-GNKEDG 57 usage_00046.pdb 1 --KVVQSPLSLVVHEGDTVTLNCSYEVTNFRSLLWYKQEKK-APTFLFMLTSSGIEKKSG 57 usage_00054.pdb 1 --KVVQSPLSLVVHEGDTVTLNCSYEVTNFRSLLWYKQEKK-APTFLFMLTSSGIEKKSG 57 usage_00064.pdb 1 ----EQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMFIYSN-GDKEDG 55 usage_00084.pdb 1 --QVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKE 58 usage_00086.pdb 1 --QVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKE 58 usage_00088.pdb 1 --QVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKE 58 usage_00100.pdb 1 --QVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKE 58 Q p L EG LNC Y WY Q P l S K usage_00039.pdb 58 RFTAQVDKSSKYISLFIRDSQPSDSATYLCAMRGD--SSYKLIFGSGTRLLVRP--- 109 usage_00046.pdb 58 RLSSILDKKELFSILNITATQTGDSAVYLCAWAGG-TSYGKLTFGQGTILTVH---- 109 usage_00054.pdb 58 RLSSILDKKELSSILNITATQTGDSAIYLCAAYNT----DKLIFGTGTRLQVFP--- 107 usage_00064.pdb 56 RFTAQLNKASQYVSLLIRDSQPSDSATYLCAVNVA---G-KSTFGDGTTLTVKPNIQ 108 usage_00084.pdb 59 RLKATLTK--KESFLHITAPKPEDSATYLCAVALNNNAGNMLTFGGGTRLMVKP--- 110 usage_00086.pdb 59 RLKATLTK--KESFLHITAPKPEDSATYLCAVALNNNAGNMLTFGGGTRLMVKP--- 110 usage_00088.pdb 59 RLKATLTK--KESFLHITAPKPEDSATYLCAVQASGG-SYIPTFGRGTSLIVHP--- 109 usage_00100.pdb 59 RLKATLTK--KESFLHITAPKPEDSATYLCAVQDLGTSGSRLTFGEGTQLTVNP--- 110 R l K L I DSA YLCA FG GT L V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################