################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:52 2021 # Report_file: c_1076_167.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00015.pdb # 2: usage_00017.pdb # 3: usage_00019.pdb # 4: usage_00028.pdb # 5: usage_00064.pdb # 6: usage_00098.pdb # 7: usage_00305.pdb # 8: usage_00341.pdb # 9: usage_00361.pdb # 10: usage_00362.pdb # 11: usage_00364.pdb # 12: usage_00755.pdb # 13: usage_01380.pdb # 14: usage_01470.pdb # 15: usage_01643.pdb # 16: usage_01644.pdb # # Length: 41 # Identity: 7/ 41 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 41 ( 61.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 41 ( 39.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 SDQVDTDKITYISA---S-YSAKLLVKPF-----NFYP--- 29 usage_00017.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00019.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00028.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00064.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00098.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---QHS 37 usage_00305.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00341.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00361.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00362.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00364.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_00755.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_01380.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_01470.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_01643.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 usage_01644.pdb 1 PDNLARDGLRYDSASDNVFMDAEQEAKA-KKANNP---Q-- 35 pDnlarDglrYdSA v mdAeqeaKa p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################