################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:37 2021 # Report_file: c_1418_13.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00236.pdb # 2: usage_00530.pdb # 3: usage_00531.pdb # 4: usage_00532.pdb # 5: usage_00857.pdb # 6: usage_01027.pdb # 7: usage_01105.pdb # # Length: 70 # Identity: 2/ 70 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 70 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 70 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 usage_00530.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 usage_00531.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 usage_00532.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 usage_00857.pdb 1 SIILAIIFHFLINLNQELLA----ITQDTKIIETGVLFLVAAAIILYDK----------K 46 usage_01027.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 usage_01105.pdb 1 --------------------SLVMSSPALPAFLLCSTLLVIKMYVVAI-ITGQVRLRKKA 39 sspalpafllcstlLVikmyvvai a usage_00236.pdb 40 FANPEDALRH 49 usage_00530.pdb 40 FANPEDALRH 49 usage_00531.pdb 40 FANPEDALRH 49 usage_00532.pdb 40 FANPEDALRH 49 usage_00857.pdb 47 -----MFF-- 49 usage_01027.pdb 40 FANPEDALRH 49 usage_01105.pdb 40 FANPEDALRH 49 dal #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################