################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:24 2021 # Report_file: c_1147_6.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00246.pdb # 2: usage_00329.pdb # 3: usage_00368.pdb # 4: usage_00411.pdb # 5: usage_00511.pdb # 6: usage_00512.pdb # 7: usage_00519.pdb # 8: usage_00520.pdb # 9: usage_00623.pdb # 10: usage_00638.pdb # 11: usage_00716.pdb # 12: usage_00717.pdb # 13: usage_00718.pdb # 14: usage_00719.pdb # 15: usage_00720.pdb # 16: usage_00722.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 35 ( 45.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 35 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00246.pdb 1 -LSKGETKFMGVCQLPSENDENEYPHRR--IDIRL 32 usage_00329.pdb 1 -LSKGETKFMGVCQLPS----KEYPHRR--IDIRL 28 usage_00368.pdb 1 VSPASG----KFGIPSYNEWR---KRIEVK----- 23 usage_00411.pdb 1 -LSKGETKFMGVCQLPS--DEKEYPHRR--IDIRL 30 usage_00511.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00512.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00519.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00520.pdb 1 -LSKGETKFMGVCQLPS--DEKEYPHRR--IDIRL 30 usage_00623.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00638.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00716.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00717.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00718.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00719.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00720.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 usage_00722.pdb 1 -LSKGETKFMGVCQLPSKNDEKEYPHRR--IDIRL 32 lskge gvcqlps phrr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################