################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:19 2021 # Report_file: c_0933_40.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00041.pdb # 2: usage_00278.pdb # 3: usage_00303.pdb # 4: usage_00328.pdb # 5: usage_00329.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 71 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 71 ( 66.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 F---AYLSDPR--TRK----------NLVAYVLTKA---N--LES--------------N 26 usage_00278.pdb 1 ----LDKLPQQ--TG-DRAGIKDRVYS-NSIYELLE---NGQ---------------R-A 33 usage_00303.pdb 1 -ETDMELKPANAAT------------R-TSRGWHTTDLKY--NP-SRV--------HRYG 35 usage_00328.pdb 1 D---VQVLPIA---------------T-NTKVLRAR---S--WSR---LRFEIEYALERG 33 usage_00329.pdb 1 D---VQVLPIA---------------T-NTKVLRAR---S--WSR---LRFEIEYALERG 33 p usage_00041.pdb 27 KYENTIV-IEN 36 usage_00278.pdb 34 GTCVL-EY--- 40 usage_00303.pdb 36 TTVNCIV-EE- 44 usage_00328.pdb 34 TTSNSYV-IEG 43 usage_00329.pdb 34 TTSNSYV-IEG 43 t n v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################