################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:43 2021 # Report_file: c_0109_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00048.pdb # 2: usage_00056.pdb # 3: usage_00070.pdb # 4: usage_00073.pdb # 5: usage_00088.pdb # 6: usage_00145.pdb # 7: usage_00146.pdb # # Length: 232 # Identity: 84/232 ( 36.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 175/232 ( 75.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/232 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 ----------------RGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAEE 41 usage_00056.pdb 1 ----------------HQRIFHWTNVILGFGDPDLA-TDFDEFMQVSADIGAYATALAED 43 usage_00070.pdb 1 ----------------RGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAEE 41 usage_00073.pdb 1 ----------------RGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAEE 41 usage_00088.pdb 1 LPLQAIAELLGVPQDDRDKLFRWSNEMTAGEDPEYADV---DPAMSSFELISYAMKMAEE 57 usage_00145.pdb 1 ----------------RGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAEE 41 usage_00146.pdb 1 ------------PQEDRGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAEE 45 r klFhWsNemtg eDPeyA dp sSaeli YAmkmAEe usage_00048.pdb 42 K-------IVTQLIQAD--G-EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 91 usage_00056.pdb 44 RRVNHHDDLTSSLVEAEV-DGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPE 102 usage_00070.pdb 42 KA-----DIVTQLIQADIDG-EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 95 usage_00073.pdb 42 KAK--ADDIVTQLIQAD--G-EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 96 usage_00088.pdb 58 RAVNPTEDIVTKLIEADIDG-EKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPD 116 usage_00145.pdb 42 K-------IVTQLIQAD--G-EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 91 usage_00146.pdb 46 K-------IVTQLIQAD--G-EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 95 ivt Li Ad g EkLSddEfgfFvvmLaVAGNETTRNsIT Gm Afa Pd usage_00048.pdb 92 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 148 usage_00056.pdb 103 QRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANR 162 usage_00070.pdb 96 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 152 usage_00073.pdb 97 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 153 usage_00088.pdb 117 QWELYKKER--P-ETAADEIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANF 173 usage_00145.pdb 92 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 148 usage_00146.pdb 96 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 152 Qwelykk r p eTAadEIVRWAtPV afqRTal D EL GvqikkGqrVvm YrSANf usage_00048.pdb 149 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM 200 usage_00056.pdb 163 DESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQM 214 usage_00070.pdb 153 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH- 203 usage_00073.pdb 154 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH- 204 usage_00088.pdb 174 DEEVFEDPHTFNILRSPNPHVGFGGTGAHYCIGANLARMTINLIFNAIADNM 225 usage_00145.pdb 149 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM 200 usage_00146.pdb 153 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM 204 DEevF DP TFnilRnPNPHvGFGGtGAHyCiGANLARmtInliFna ad #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################