################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:17 2021 # Report_file: c_0064_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00021.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00049.pdb # 5: usage_00074.pdb # 6: usage_00075.pdb # 7: usage_00076.pdb # 8: usage_00077.pdb # 9: usage_00078.pdb # 10: usage_00095.pdb # 11: usage_00096.pdb # # Length: 177 # Identity: 26/177 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/177 ( 21.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/177 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 KPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVA--GAG-GLLRLPNRIP 57 usage_00036.pdb 1 --PVAAVQGFCVGGGFELA-CADIIVAADTAQFGLPETKVGII-GEC--GVVHR-ARQLP 53 usage_00037.pdb 1 --PVAAVQGFCVGGGFELA-CADIIVAADTAQFGLPETKVGII-GEC--GVVHR-ARQLP 53 usage_00049.pdb 1 -PTVAAVNGPAVAGGAGLALACDLVV-DEEARLGYTEVKIGFVA--A-L-VSVILVRAVG 54 usage_00074.pdb 1 -PTIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIA--GAG-GVFRIVEQLP 56 usage_00075.pdb 1 -PTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIA--AAG-GVFRIAEQLP 56 usage_00076.pdb 1 -PTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIA--AAG-GVFRIAEQLP 56 usage_00077.pdb 1 -PTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIA--AAG-GVFRIAEQLP 56 usage_00078.pdb 1 -PLIAAVEGYALAGGTELALAADLIVAARDSAFGIPEVKRGLVA--GGG-GLLRLPERIP 56 usage_00095.pdb 1 -PTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIA--AAG-GVFRIAEQLP 56 usage_00096.pdb 1 -PTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIA--AAG-GVFRIAEQLP 56 AAV G GG eLa D v a fG pE K G r p usage_00021.pdb 58 YQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRII 117 usage_00036.pdb 54 YHIALQLILTGERIKADEARHYGLVNEVVPFAELEEAALRWASKLNAASPLAVQAAKAAA 113 usage_00037.pdb 54 YHIALQLILTGERIKADEARHYGLVNEVVPFAELEEAALRWASKLNAASPLAVQAAKAAA 113 usage_00049.pdb 55 EKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELL 114 usage_00074.pdb 57 RKVALELVLTGEPMTASDALRWGLINEVVPDGTVVEAALALAERITCNAPLSVQASKRVA 116 usage_00075.pdb 57 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIA 116 usage_00076.pdb 57 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIA 116 usage_00077.pdb 57 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIA 116 usage_00078.pdb 57 YAIA-ELALTGDNLPAERAHELGLVNVLAEPGTALDAAIALAEKITANGPLAVVATKRII 115 usage_00095.pdb 57 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIA 116 usage_00096.pdb 57 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIA 116 A L LTG A A Gl N A A Pl v a K usage_00021.pdb 118 IE------------SASWAPEEAFAK-QGE-ILMPIFVSEDA-KEGAKAFAEK---- 155 usage_00036.pdb 114 LG------------RLGH-------------PLEVAL-T---RFEPIEEYAAT---- 137 usage_00037.pdb 114 LG------------RLGH-------------PLEVAL-T---RFEPIEEYAAT---- 137 usage_00049.pdb 115 LA-----LPGGLEDGFRL---------AALA-NAWVRETGDL-AEGIRAFFEK---- 151 usage_00074.pdb 117 YGADDGI-----IGAEEP---------KWE-RTIREFTE-LLKSEDAKEGPLAFAEK 157 usage_00075.pdb 117 YGVDDGV-----VVGDEP---------GWD-RTMREMRA-LLKSEDAKEGPRAFAEK 157 usage_00076.pdb 117 YGVDDGV-----VVGDEP---------GWD-RTMREMRA-LLKSEDAKEGPRAFAEK 157 usage_00077.pdb 117 YGVDDGV-----VVGDEP---------GWD-RTMREMRA-LLKSEDAKEGPRA---- 153 usage_00078.pdb 116 TE------------SRGWSPDTF---AEQK-ILVPVFTSNDA-KEGAIAFAER---- 151 usage_00095.pdb 117 YGVDDGV-----VVGDEP---------GWD-RTMREMRA-LLKSEDAKEGPRAFAEK 157 usage_00096.pdb 117 YGVDDGV-----VVGDEP---------GWD-RTMREMRA-LLKSEDAKEGPRAFAEK 157 E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################