################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:43:04 2021 # Report_file: c_0308_3.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00008.pdb # 6: usage_00009.pdb # 7: usage_00019.pdb # 8: usage_00020.pdb # 9: usage_00023.pdb # 10: usage_00027.pdb # 11: usage_00028.pdb # 12: usage_00029.pdb # 13: usage_00040.pdb # 14: usage_00045.pdb # 15: usage_00046.pdb # 16: usage_00047.pdb # 17: usage_00053.pdb # 18: usage_00061.pdb # 19: usage_00062.pdb # 20: usage_00063.pdb # 21: usage_00064.pdb # 22: usage_00065.pdb # 23: usage_00066.pdb # 24: usage_00067.pdb # 25: usage_00068.pdb # 26: usage_00069.pdb # 27: usage_00071.pdb # 28: usage_00072.pdb # # Length: 129 # Identity: 41/129 ( 31.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/129 ( 31.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/129 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00002.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00003.pdb 1 --------------------ITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 40 usage_00004.pdb 1 --EQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 58 usage_00008.pdb 1 -NVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTF 59 usage_00009.pdb 1 -NVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTF 59 usage_00019.pdb 1 --EQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 58 usage_00020.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00023.pdb 1 NAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 60 usage_00027.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00028.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00029.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00040.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00045.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00046.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00047.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00053.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00061.pdb 1 --------------------ITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 40 usage_00062.pdb 1 -AEQSRLTINQWISNKTEGRITDVIPPQAINEFTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00063.pdb 1 -AEQSRLTINQWISNKTEGRITDVIPPQAINEFTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00064.pdb 1 --EQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 58 usage_00065.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00066.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00067.pdb 1 --------------------ITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 40 usage_00068.pdb 1 --EQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 58 usage_00069.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00071.pdb 1 -AEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 59 usage_00072.pdb 1 -------------------------PSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKE 35 T L L N YFKG WKS F PENTR usage_00001.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00002.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00003.pdb 41 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 93 usage_00004.pdb 59 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 111 usage_00008.pdb 60 SFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEV 119 usage_00009.pdb 60 SFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEV 119 usage_00019.pdb 59 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 111 usage_00020.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00023.pdb 61 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 113 usage_00027.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00028.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00029.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00040.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00045.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00046.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00047.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00053.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00061.pdb 41 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 93 usage_00062.pdb 60 LFYKADGESCSVLMMYQESKFRYRRVA-------ESTQVLELPFKGDDITMVLILPKLEK 112 usage_00063.pdb 60 LFYKADGESCSVLMMYQESKFRYRRVA-------ESTQVLELPFKGDDITMVLILPKLEK 112 usage_00064.pdb 59 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 111 usage_00065.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00066.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00067.pdb 41 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 93 usage_00068.pdb 59 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 111 usage_00069.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00071.pdb 60 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 112 usage_00072.pdb 36 LFYKADGESCSASMMYQEGKFRYRRVA-------EGTQVLELPFKGDDITMVLILPKPEK 88 F K D MMYQ F Y QVLE P GD I M L L E usage_00001.pdb 113 SLAKVEKEL 121 usage_00002.pdb 113 SLAKVEKEL 121 usage_00003.pdb 94 SLAKVEKEL 102 usage_00004.pdb 112 SLAKVEKEL 120 usage_00008.pdb 120 PLATLEPLV 128 usage_00009.pdb 120 PLATLEPLV 128 usage_00019.pdb 112 SLAKVEKEL 120 usage_00020.pdb 113 SLAKVEKE- 120 usage_00023.pdb 114 SLAKVEKEL 122 usage_00027.pdb 113 SLAKVEKEL 121 usage_00028.pdb 113 SLAKVEKEL 121 usage_00029.pdb 113 SLAKVEKEL 121 usage_00040.pdb 113 SLAKVEKE- 120 usage_00045.pdb 113 SLAKVEKE- 120 usage_00046.pdb 113 SLAKVEKEL 121 usage_00047.pdb 113 SLAKVEKEL 121 usage_00053.pdb 113 SLAKVEKEL 121 usage_00061.pdb 94 SLAKVEKEL 102 usage_00062.pdb 113 TLAKVEQEL 121 usage_00063.pdb 113 TLAKVEQE- 120 usage_00064.pdb 112 SLAKVEKE- 119 usage_00065.pdb 113 SLAKVEKEL 121 usage_00066.pdb 113 SLAKVEKE- 120 usage_00067.pdb 94 SLAKVEKEL 102 usage_00068.pdb 112 SLAKVEKEL 120 usage_00069.pdb 113 SLAKVEKEL 121 usage_00071.pdb 113 SLAKVEKEL 121 usage_00072.pdb 89 SLAKVEKE- 96 LA E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################