################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:57 2021 # Report_file: c_1124_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00113.pdb # 2: usage_00114.pdb # 3: usage_00209.pdb # 4: usage_00210.pdb # 5: usage_00211.pdb # 6: usage_00212.pdb # 7: usage_00213.pdb # 8: usage_00214.pdb # 9: usage_00215.pdb # 10: usage_00216.pdb # 11: usage_00554.pdb # 12: usage_00555.pdb # # Length: 68 # Identity: 15/ 68 ( 22.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 68 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 68 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 --RDQILAAAEQLIAESGF-QGLSQKLANEAGVAAGTIYRYFSDKEHLLEEVRLNVAKRI 57 usage_00114.pdb 1 ---DQILAAAEQLIAESGF-QGLSQKLANEAGVAAGTIYRYFSDKEHLLEEVRLNVAKRI 56 usage_00209.pdb 1 ----ALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 55 usage_00210.pdb 1 -KKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 58 usage_00211.pdb 1 -KKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 58 usage_00212.pdb 1 --KQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 57 usage_00213.pdb 1 -KKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 58 usage_00214.pdb 1 -KKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 58 usage_00215.pdb 1 -KKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 58 usage_00216.pdb 1 DKKQALLEAATQAIAQSGI-AASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDL 59 usage_00554.pdb 1 TKKQAILETALQLFVSQGFHGTSTATIAREAGVATGTLFHHFPSKEQLLEQLFLGVKQEF 60 usage_00555.pdb 1 TKKQAILETALQLFVSQGFHGTSTATIAREAGVATGTLFHHFPSKEQLLEQLFLGVKQEF 60 L A Q G A AGVA GT F K L L usage_00113.pdb 58 ASAVQA-- 63 usage_00114.pdb 57 ASAV---- 60 usage_00209.pdb 56 CQSMIMEL 63 usage_00210.pdb 59 CQSMIMEL 66 usage_00211.pdb 59 CQSMIMEL 66 usage_00212.pdb 58 CQSMIMEL 65 usage_00213.pdb 59 CQSMIMEL 66 usage_00214.pdb 59 CQSMIMEL 66 usage_00215.pdb 59 CQSMIME- 65 usage_00216.pdb 60 CQSMIMEL 67 usage_00554.pdb 61 ADAIQASV 68 usage_00555.pdb 61 ADAIQASV 68 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################