################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:57:04 2021 # Report_file: c_0146_7.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00088.pdb # 2: usage_00089.pdb # 3: usage_00112.pdb # 4: usage_00116.pdb # 5: usage_00117.pdb # 6: usage_00118.pdb # 7: usage_00138.pdb # 8: usage_00140.pdb # 9: usage_00141.pdb # 10: usage_00142.pdb # 11: usage_00143.pdb # 12: usage_00144.pdb # 13: usage_00145.pdb # 14: usage_00208.pdb # 15: usage_00209.pdb # 16: usage_00241.pdb # 17: usage_00242.pdb # 18: usage_00243.pdb # # Length: 115 # Identity: 83/115 ( 72.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/115 ( 77.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/115 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 usage_00089.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00112.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 usage_00116.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00117.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00118.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00138.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 usage_00140.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00141.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00142.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00143.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 usage_00144.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00145.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00208.pdb 1 -QNIDQPTEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00209.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 usage_00241.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00242.pdb 1 QNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 59 usage_00243.pdb 1 -NIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF 58 nidqp TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRF usage_00088.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCASMDSN--YQLIWGAG-TKLIIKP--- 107 usage_00089.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVKDSN--YQLIWGAG-TKLIIKP--- 108 usage_00112.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCAVKDSN--YQLIWGAG-TKLIIKP--- 107 usage_00116.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRG-TSLIVHP--- 110 usage_00117.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRG-TSLIVHP--- 110 usage_00118.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRG-TSLIVHP--- 110 usage_00138.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCAVMDSN--YQLIWGAG-TKLIIKPDIQ 110 usage_00140.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVVDSN--YQLIWGAG-TKLIIKP--- 108 usage_00141.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAGMDSN--YQLIWGAG-TKLIIKP--- 108 usage_00142.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAGMDSN--YQLIWGAG-TKLIIKP--- 108 usage_00143.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCAAEDSN--YQLIWGAG-TKLIIKP--- 107 usage_00144.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAAMDSN--YQLIWGAG-TKLIIKP--- 108 usage_00145.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAAMDSN--YQLIWGAG-TKLIIKP--- 108 usage_00208.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVLNTG--GFKTIFGAGTRLFVKA--- 109 usage_00209.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCAVRNGF--KTIFGAG--TRLFVKA--- 106 usage_00241.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAVRDGD--YKLSFGAG-TTVTVRANIQ 111 usage_00242.pdb 60 SSFLSRSKGYSYLLLKELQMKDSASYLCAGMDSN--YQLIWGAG-TKLIIKP--- 108 usage_00243.pdb 59 SSFLSRSKGYSYLLLKELQMKDSASYLCAGMDSN--YQLIWGAG-TKLIIKP--- 107 SSFLSRSKGYSYLLLKELQMKDSASYLCA T l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################