################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:56:50 2021 # Report_file: c_1023_98.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00063.pdb # 4: usage_00384.pdb # 5: usage_00385.pdb # 6: usage_00386.pdb # 7: usage_00387.pdb # 8: usage_00388.pdb # 9: usage_00389.pdb # 10: usage_00390.pdb # 11: usage_00391.pdb # 12: usage_00392.pdb # 13: usage_00393.pdb # 14: usage_00394.pdb # 15: usage_00395.pdb # 16: usage_00396.pdb # 17: usage_00433.pdb # 18: usage_00604.pdb # 19: usage_00605.pdb # 20: usage_00606.pdb # 21: usage_01182.pdb # 22: usage_01183.pdb # 23: usage_01184.pdb # # Length: 47 # Identity: 14/ 47 ( 29.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 47 ( 93.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 47 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00062.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00063.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00384.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00385.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00386.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTT 47 usage_00387.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00388.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTT 47 usage_00389.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00390.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00391.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00392.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00393.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00394.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTT 47 usage_00395.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00396.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVT- 46 usage_00433.pdb 1 GMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLD- 46 usage_00604.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTT 47 usage_00605.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_00606.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_01182.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFV-- 45 usage_01183.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 usage_01184.pdb 1 GARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAF--- 44 GarcAlawsvqTAalarEHNnAqlIgIGgrmhtvaeALaIvdaf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################