################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 09:36:04 2021 # Report_file: c_0401_2.html ################################################################################################ #==================================== # Aligned_structures: 68 # 1: usage_00011.pdb # 2: usage_00021.pdb # 3: usage_00026.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00033.pdb # 9: usage_00034.pdb # 10: usage_00035.pdb # 11: usage_00038.pdb # 12: usage_00039.pdb # 13: usage_00040.pdb # 14: usage_00056.pdb # 15: usage_00060.pdb # 16: usage_00061.pdb # 17: usage_00062.pdb # 18: usage_00063.pdb # 19: usage_00064.pdb # 20: usage_00065.pdb # 21: usage_00067.pdb # 22: usage_00068.pdb # 23: usage_00069.pdb # 24: usage_00070.pdb # 25: usage_00071.pdb # 26: usage_00072.pdb # 27: usage_00073.pdb # 28: usage_00074.pdb # 29: usage_00076.pdb # 30: usage_00086.pdb # 31: usage_00087.pdb # 32: usage_00088.pdb # 33: usage_00089.pdb # 34: usage_00096.pdb # 35: usage_00120.pdb # 36: usage_00123.pdb # 37: usage_00124.pdb # 38: usage_00136.pdb # 39: usage_00151.pdb # 40: usage_00158.pdb # 41: usage_00159.pdb # 42: usage_00172.pdb # 43: usage_00176.pdb # 44: usage_00177.pdb # 45: usage_00178.pdb # 46: usage_00179.pdb # 47: usage_00180.pdb # 48: usage_00182.pdb # 49: usage_00183.pdb # 50: usage_00186.pdb # 51: usage_00191.pdb # 52: usage_00192.pdb # 53: usage_00193.pdb # 54: usage_00194.pdb # 55: usage_00196.pdb # 56: usage_00205.pdb # 57: usage_00210.pdb # 58: usage_00211.pdb # 59: usage_00212.pdb # 60: usage_00214.pdb # 61: usage_00216.pdb # 62: usage_00223.pdb # 63: usage_00227.pdb # 64: usage_00228.pdb # 65: usage_00229.pdb # 66: usage_00230.pdb # 67: usage_00235.pdb # 68: usage_00238.pdb # # Length: 83 # Identity: 26/ 83 ( 31.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 83 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 83 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00021.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00026.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00029.pdb 1 -IVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPTKLIYWASTR 59 usage_00030.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00031.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00032.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00033.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00034.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00035.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00038.pdb 1 -IVMSQFPSSLAVSAGEKVTMSCKSSQSLLNSRTRKSYLAWYQQKPGQFPKLLIYWAATR 59 usage_00039.pdb 1 DIVMSQFPSSLAVSAGEKVTMSCKSSQSLLNSRTRKSYLAWYQQKPGQFPKLLIYWAATR 60 usage_00040.pdb 1 DIVMSQFPSSLAVSAGEKVTMSCKSSQSLLNSRTRKSYLAWYQQKPGQFPKLLIYWAATR 60 usage_00056.pdb 1 -IVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSSNQKNYLAWYQQKPGQSPKLLVYFASTR 59 usage_00060.pdb 1 --MMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00061.pdb 1 --MMTQSPSSLAVSAGEKVTMNCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00062.pdb 1 --VMSQSPSSLAVSAGERVTMTCKSSQSLFNSKTRRNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00063.pdb 1 --VMSQSPSSLAVSAGERVTMTCKSSQSLFNSKTRRNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00064.pdb 1 --VMSQSPSSLAVSAGERVTMTCKSSQSLFNSKTRRNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00065.pdb 1 --VMSQSPSSLAVSAGERVTMTCKSSQSLFNSKTRRNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00067.pdb 1 --VMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00068.pdb 1 --VMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00069.pdb 1 --VMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00070.pdb 1 -IVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00071.pdb 1 -IVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00072.pdb 1 -IVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00073.pdb 1 -IVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00074.pdb 1 --VMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00076.pdb 1 DIVMTQSPDSLAVSLGERATINCKSSQSVLNSGNQKNYLTWYQQKPGQPPKLLIYWASTR 60 usage_00086.pdb 1 NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00087.pdb 1 NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00088.pdb 1 --VMTQSPSSLTVTAGEKVTMSCKSSQSLLSSGNQKNYLTWYQQIPGQPPKLLIYWASTR 58 usage_00089.pdb 1 --VMTQSPSSLTVTAGEKVTMSCKSSQSLLSSGNQKNYLTWYQQIPGQPPKLLIYWASTR 58 usage_00096.pdb 1 --VLTQTPSSVSAAVGGTVTINCQASQSVY----NKNYLAWYQQKPGQPPKRLIYSASTL 54 usage_00120.pdb 1 DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLTWYQQKPGQPPKLLIYWASTR 60 usage_00123.pdb 1 ---MSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTR 57 usage_00124.pdb 1 DVVMTQTPSSLAMSVGQKVTMSCKSSQSLLNISNQKNYLAWYQQKPGQSPKLLVYFASTR 60 usage_00136.pdb 1 -IVMTQSPSSLSVSAGERVTMSCKSSQSLLNSGNQKNFLAWYQQKPGQPPKLLIYGASTR 59 usage_00151.pdb 1 DIVMTQSPSSLAVSAGEKVTMSCRSSQSLYYSGIKKNLLAWYQLKPGQSPKLLIYYASTL 60 usage_00158.pdb 1 -LVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00159.pdb 1 DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00172.pdb 1 ---VMTQTESPVSAAGGTVTIKCQSSQSVY-----NNRLAWYQQKPGQRPKLLIYSASTL 52 usage_00176.pdb 1 DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00177.pdb 1 --VMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00178.pdb 1 --VMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00179.pdb 1 DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 60 usage_00180.pdb 1 -IVLTQSPSSLAVSAGERVTMSCKSSQSLFKSRNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00182.pdb 1 ELVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWASTR 60 usage_00183.pdb 1 --VMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKSYLAWYQQKPGQPPKLLIYWASTR 58 usage_00186.pdb 1 --VMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTR 58 usage_00191.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00192.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00193.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00194.pdb 1 -IEMTQSPSSLGVSVGEKVTMSCKSSQNLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00196.pdb 1 DIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTR 60 usage_00205.pdb 1 -IVMTQSPSSLTVTTGEKVTMTCKSSQSLLNSRTQKNYLTWYQQKPGQSPKLLIYWASTR 59 usage_00210.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00211.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00212.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 58 usage_00214.pdb 1 -IVMTQSPDSLAVSLGERATINCESSQSLLNSGNQKNYLTWYQQKPGQPPKPLIYWASTR 59 usage_00216.pdb 1 -IVMTQSPFSLAVSEGEMVTINCKSSQSLLSSGNQKNYLAWYQQKPGQSPKLLIYYASTG 59 usage_00223.pdb 1 DIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTR 60 usage_00227.pdb 1 -IVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRNRKNYLAWYQQKPGQSPKPLIYWASTR 59 usage_00228.pdb 1 DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTR 60 usage_00229.pdb 1 DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTR 60 usage_00230.pdb 1 --VMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTR 58 usage_00235.pdb 1 -IVMTQSPDSLAVSLGERVTMNCKSSQSLLYSTNQKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00238.pdb 1 --VMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKPGQSPKLLIYWASTR 58 q p S G T C sSQ L WYQq PGQ P L A T usage_00011.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00021.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00026.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00029.pdb 60 ESGVPDRFTGSGSGTDFTLTISS 82 usage_00030.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00031.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00032.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00033.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00034.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00035.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00038.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00039.pdb 61 ESGVPDRFTGSGSGTDFTLT--- 80 usage_00040.pdb 61 ESGVPDRFTGSGSGTDFTLTISS 83 usage_00056.pdb 60 ESGVPDRFIGSGSGTDFTLT--- 79 usage_00060.pdb 59 ESGVPDRFTGSGSGTDFTLTISS 81 usage_00061.pdb 59 ESGVPDRFTGSGSGTDFTLTISS 81 usage_00062.pdb 59 ESGVPDRFTGSGSGTEFTLTISS 81 usage_00063.pdb 59 ESGVPDRFTGSGSGTEFTLT--- 78 usage_00064.pdb 59 ESGVPDRFTGSGSGTEFTLTISS 81 usage_00065.pdb 59 ESGVPDRFTGSGSGTEFTLTISS 81 usage_00067.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 usage_00068.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 usage_00069.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 usage_00070.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00071.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00072.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00073.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00074.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 usage_00076.pdb 61 ESGVPDRFSGSGSGTDFTLT--- 80 usage_00086.pdb 61 ESGVPDRFTGSGSGTDFTLT--- 80 usage_00087.pdb 61 ESGVPDRFTGSGSGTDFTLT--- 80 usage_00088.pdb 59 ESGVPDRFTGSGSGTDFTLTINS 81 usage_00089.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 usage_00096.pdb 55 ASGVSSRFKGSGSGTQFTLTI-- 75 usage_00120.pdb 61 ESGVPDRFSGSGSGTDFTLTISS 83 usage_00123.pdb 58 ESGVPDRFTGRGSGTDFTLTI-- 78 usage_00124.pdb 61 ESGVPDRFIGSGSGTDFTLT--- 80 usage_00136.pdb 60 ESGVPDRFTGSGSGTDFTLTI-- 80 usage_00151.pdb 61 FTGVPDRFTGSGSGTDYTLTITS 83 usage_00158.pdb 60 ESGVPDRFTGSGSGTDFTLT--- 79 usage_00159.pdb 61 ESGVPDRFTGSGSGTDFTLTITS 83 usage_00172.pdb 53 ASGVPSRFKGSGSGTQFTLTISD 75 usage_00176.pdb 61 ESGVPDRFTGSGSGTDFALTISS 83 usage_00177.pdb 59 ESGVPDRFTGSGSGTDFALT--- 78 usage_00178.pdb 59 ESGVPDRFTGSGSGTDFALTISS 81 usage_00179.pdb 61 ESGVPDRFTGSGSGTDFALTISS 83 usage_00180.pdb 60 ESGVPDRFTGSGSGTDFTLTING 82 usage_00182.pdb 61 ESGVPDRFSGSGSGTDFTLTISS 83 usage_00183.pdb 59 ESGVPDRFSGSGSGTDFTLTISS 81 usage_00186.pdb 59 ESGVPDRFSGSGSGTDFTLT--- 78 usage_00191.pdb 60 ESGVPDRFTGTGSGTDFTLTISS 82 usage_00192.pdb 60 ESGVPDRFTGTGSGTDFTLTISS 82 usage_00193.pdb 60 ESGVPDRFTGTGSGTDFTLTISS 82 usage_00194.pdb 60 ESGVPDRFTGTGSGTDFTLTISS 82 usage_00196.pdb 61 ESGVPDRFTGSGSGTDFTLT--- 80 usage_00205.pdb 60 ESGVPDRFTGSGSGTDFTLS--- 79 usage_00210.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00211.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00212.pdb 59 ESGVPDRFTGSGSGTDFTLTITS 81 usage_00214.pdb 60 ESGVPDRFSGSGSGTDFTLT--- 79 usage_00216.pdb 60 QSGVPDRFIGSGSGTDFTLTISD 82 usage_00223.pdb 61 ESGVPDRFTGSGSGTDFTLT--- 80 usage_00227.pdb 60 ESGVPDRFTGSGSGTDFTLTISS 82 usage_00228.pdb 61 KSGVPDRFSGSGFGTDFTLTITS 83 usage_00229.pdb 61 KSGVPDRFSGSGFGTDFTLT--- 80 usage_00230.pdb 59 ESGVPDRFTGRGSGTDFTLT--- 78 usage_00235.pdb 60 ESGVPDRFSGSGSGTDFTLT--- 79 usage_00238.pdb 59 ESGVPDRFTGSGSGTDFTLT--- 78 sGVp RF G G GT f Lt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################