################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:40 2021 # Report_file: c_0224_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00055.pdb # 2: usage_00056.pdb # 3: usage_00138.pdb # 4: usage_00139.pdb # 5: usage_00144.pdb # 6: usage_00147.pdb # 7: usage_00148.pdb # # Length: 126 # Identity: 18/126 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/126 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/126 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 PLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQ 60 usage_00056.pdb 1 PLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQ 60 usage_00138.pdb 1 PLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQ 60 usage_00139.pdb 1 PLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQ 60 usage_00144.pdb 1 PLFVKPANQGSSVGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGNAVPH 60 usage_00147.pdb 1 PLVVKPN-----G-VKIVYDKDELIS-LETVFEWDSEVVIEKYIKGEEITCSIFD---GK 50 usage_00148.pdb 1 PLFVKPANQGSSVGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGNAVPH 60 PLfVKPa v Vs V ala DhkV vE GrEIeCavlg p usage_00055.pdb 61 ASTCGEIVL--QVVVPAQIPSEVNDKIRAIAIQAYQTLGCAG-MARVDVFLTADNEVVIN 117 usage_00056.pdb 61 ASTCGEIVLGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAG-MARVDVFLTADNEVVIN 119 usage_00138.pdb 61 ASTCGEIVLA-QVVVPAQIPSEVNDKIRAIAIQAYQTLGCAG-ARVDVFLTA-DNEVVIN 117 usage_00139.pdb 61 ASTCGEIVL---VVVPAQIPSEVNDKIRAIAIQAYQTLGCAG-ARVDVFLTA-DNEVVIN 115 usage_00144.pdb 61 ASVCGEVVV--EIVIPADIDAQTQQRIQQIAVQAYQALGCAG-MARVDVFLCADGRIVIN 117 usage_00147.pdb 51 QLPIISIRH--TIEEVIELPAELKERVNKASLACYKALKCSVYARVDV---K-DGIPYVE 104 usage_00148.pdb 61 ASVCGEVVV--EIVIPADIDAQTQQRIQQIAVQAYQALGCAG-MARVDVFLCADGRIVIN 117 as cge v v pa i i ia qaYq LgCag D vin usage_00055.pdb 118 E----- 118 usage_00056.pdb 120 E----- 120 usage_00138.pdb 118 EI-NTL 122 usage_00139.pdb 116 E----- 116 usage_00144.pdb 118 EV-NT- 121 usage_00147.pdb 105 VNT--- 107 usage_00148.pdb 118 EV-NT- 121 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################