################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:10 2021 # Report_file: c_0173_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00038.pdb # 2: usage_00415.pdb # 3: usage_00416.pdb # 4: usage_00417.pdb # 5: usage_00418.pdb # 6: usage_00419.pdb # 7: usage_00420.pdb # # Length: 195 # Identity: 52/195 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 174/195 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/195 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKL-PG-TIYTAAKEIEEAGGQA 58 usage_00415.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 usage_00416.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 usage_00417.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 usage_00418.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 usage_00419.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 usage_00420.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLP-----V-EE-SDAREVVALIRAAGRQA 52 ktlvtGGdsGIGrAaAiafAreGAdVAigylp v e darevvalIraAGrQA usage_00038.pdb 59 LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLG-SIEEVPLKRFDLMNGIQVR 117 usage_00415.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 usage_00416.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 usage_00417.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 usage_00418.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 usage_00419.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 usage_00420.pdb 53 VALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLY 112 valpGDIRDetfcqrlVAraaEalGGlDIlVNNAarqqal SIgEmttehFDatvktnly usage_00038.pdb 118 GTYAVSQSCIPHMKGRDNPHILTLSPPIR---LEPKWLRPTPYMMAKYGMTLCALGIAEE 174 usage_00415.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 usage_00416.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 usage_00417.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 usage_00418.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 usage_00419.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 usage_00420.pdb 113 GMFWITKAAIPHL-P-PGASIINTTS-VQAVRASA---NLLDYATTKAGIIAFTRSLAKQ 166 GmfwitkaaIPHl p pgasIintts vq asa nlldYattKaGiiaftrslAkq usage_00038.pdb 175 LRDAGIASNTLWPRT 189 usage_00415.pdb 167 LGPRGIRVNAVAPG- 180 usage_00416.pdb 167 LGPRGIRVNAVAPG- 180 usage_00417.pdb 167 LGPRGIRVNAVAPG- 180 usage_00418.pdb 167 LGPRGIRVNAVAPG- 180 usage_00419.pdb 167 LGPRGIRVNAVAPG- 180 usage_00420.pdb 167 LGPRGIRVNAVAPG- 180 LgprGIrvNavaPg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################