################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:13 2021 # Report_file: c_0677_66.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00903.pdb # 2: usage_00904.pdb # 3: usage_01155.pdb # 4: usage_01156.pdb # 5: usage_01447.pdb # # Length: 63 # Identity: 9/ 63 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 63 ( 76.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 63 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00903.pdb 1 ----PYKLNLVATPLFLKPGIPYPIKVQVK-DSLDQLV--GGVPVTLNAQTID--VNQET 51 usage_00904.pdb 1 ----PYKLNLVATPLFLKPGIPYPIKVQVK-DSLDQLV--GGVPVTLNAQTID--VNQET 51 usage_01155.pdb 1 ----PYKLNLVATPLFLKPGIPYPIKVQVK-DSLDQLV--GGVPVTLNAQTID--VNQET 51 usage_01156.pdb 1 ----PYKLNLVATPLFLKPGIPYPIKVQVK-DSLDQLV--GGVPVTLNAQTID--VNQET 51 usage_01447.pdb 1 DKPLRLAVSL--SKEIYYHGEPIPVTVAVTNS-TEKTVKK--IKVLVEQVTNVVLYSSDY 55 pyklnL tplflkpGiPyPikVqVk d ldqlV vpVtlnaqTid vnqet usage_00903.pdb 52 SD- 53 usage_00904.pdb 52 SD- 53 usage_01155.pdb 52 SD- 53 usage_01156.pdb 52 SD- 53 usage_01447.pdb 56 YIK 58 sd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################