################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:55:55 2021 # Report_file: c_0148_13.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00018.pdb # 6: usage_00034.pdb # 7: usage_00042.pdb # 8: usage_00052.pdb # 9: usage_00053.pdb # 10: usage_00056.pdb # 11: usage_00057.pdb # 12: usage_00060.pdb # 13: usage_00075.pdb # 14: usage_00076.pdb # 15: usage_00077.pdb # 16: usage_00078.pdb # 17: usage_00079.pdb # 18: usage_00080.pdb # 19: usage_00081.pdb # 20: usage_00082.pdb # 21: usage_00083.pdb # 22: usage_00098.pdb # 23: usage_00099.pdb # 24: usage_00114.pdb # 25: usage_00115.pdb # 26: usage_00118.pdb # 27: usage_00161.pdb # 28: usage_00183.pdb # 29: usage_00191.pdb # 30: usage_00192.pdb # 31: usage_00202.pdb # 32: usage_00203.pdb # 33: usage_00257.pdb # 34: usage_00307.pdb # 35: usage_00310.pdb # 36: usage_00323.pdb # # Length: 111 # Identity: 44/111 ( 39.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/111 ( 56.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/111 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASFLESGVPS 60 usage_00004.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASFLESGVPS 60 usage_00009.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVDTSLAWYKQKPGKAPKLLIYSASFLYSGVPS 58 usage_00010.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVDTSLAWYKQKPGKAPKLLIYSASFLYSGVPS 58 usage_00018.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASDLYSGVPS 59 usage_00034.pdb 1 DIQMTQSPSTLSASIGDRVTITCRASEGIYHWLAWYQQKPGKAPKLLIYKASSLASGAPS 60 usage_00042.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 59 usage_00052.pdb 1 DIQMTQSPSSLSASVGDRVTITCKASQNVGINVAWYQQKPGKAPKSLISSASYRYSGVPS 60 usage_00053.pdb 1 DIQMTQSPSSLSASVGDRVTITCKASQNVGINVAWYQQKPGKAPKSLISSASYRYSGVPS 60 usage_00056.pdb 1 DIQMTQSPSSLSASVGDRVTITCKASQNVGINVAWYQQKPGKAPKLLISSASYRYSGVPS 60 usage_00057.pdb 1 --QMTQSPSSLSASVGDRVTITCKASQNVGINVAWYQQKPGKAPKLLISSASYRYSGVPS 58 usage_00060.pdb 1 DIQMTQSPSSLSASVGDRVTITCQASQDISNFLIWYQQKPGKAPKLLIYDASNLETGVPS 60 usage_00075.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 60 usage_00076.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 58 usage_00077.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 58 usage_00078.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 60 usage_00079.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 59 usage_00080.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 58 usage_00081.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 60 usage_00082.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 58 usage_00083.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPS 60 usage_00098.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00099.pdb 1 DIQMTQSPSTLSASVGDRVTITCKASENVDTYVSWYQQKPGKAPKLLIYGASNRYTGVPS 60 usage_00114.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00115.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00118.pdb 1 -IQMTQSPSSLSASVGDRVTITCKASQDVSIGVAWYQRKPGKAPKLLIYSASYRYTGVPS 59 usage_00161.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 60 usage_00183.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00191.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 60 usage_00192.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00202.pdb 1 -IQMTQSPSSLSASVGDRVTITCKASQDVSTAVAWYQQKPGKAPKLLIYSASYRYTGVPS 59 usage_00203.pdb 1 DIQMTQSPSSLSASVGDRVTITCKASQDVSTAVAWYQQKPGKAPKLLIYSASYRYTGVPS 60 usage_00257.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 60 usage_00307.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPS 59 usage_00310.pdb 1 DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPS 60 usage_00323.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYAASYLYSGVPS 60 qMTQSPS lsaS GdRVTITC AS Wy qKPGKaPK LI As GvPS usage_00003.pdb 61 RFSGSRSGTDFTLTISSLQPEDFATYYCQQYYSYSAPVTFGQGTKVEI--- 108 usage_00004.pdb 61 RFSGSRSGTDFTLTISSLQPEDFATYYCQQYYSYSAPVTFGQGTKVEI--- 108 usage_00009.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSTGHPQTFGQGT--KVEI--- 104 usage_00010.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSTGHPQTFGQGT--KVEI--- 104 usage_00018.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGT--KVEI--- 105 usage_00034.pdb 61 RFSGSGSGTDFTLTISSLQPDDFATYYCQQYSNYPLTFGGGT--KLEI--- 106 usage_00042.pdb 60 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 105 usage_00052.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYFCQQYDTYPFTFGQGT--KVEI--- 106 usage_00053.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYFCQQYDTYPFTFGQGT--KVEI--- 106 usage_00056.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYFCQQYDTYPFTFGQGT--KVEI--- 106 usage_00057.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYFCQQYDTYPFTFGQGT--KVEI--- 104 usage_00060.pdb 61 RFSGSGSGTDFTFTISSLQPEDIATYYCQQYHNLPPFTFGPG--TKLEI-- 107 usage_00075.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 106 usage_00076.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 104 usage_00077.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 104 usage_00078.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 106 usage_00079.pdb 60 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 105 usage_00080.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 104 usage_00081.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 106 usage_00082.pdb 59 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEIKRT 107 usage_00083.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGT--KVEI--- 106 usage_00098.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGT--KVEI--- 105 usage_00099.pdb 61 RFSGSGSGTDFTLTISSLQPDDFATYYCGQSYNYPFTFGQGT--KVEV--- 106 usage_00114.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGT--KVEI--- 105 usage_00115.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGT--KVEI--- 105 usage_00118.pdb 60 RFSGSGSGTDFTLTISSLQPEDFATYYCQQYYIYPYTFGQGT--KVEI--- 105 usage_00161.pdb 61 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSRPVTFGQGT--KVEI--- 106 usage_00183.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGT--KVEI--- 105 usage_00191.pdb 61 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSSDDPITFGQGT--KVEI--- 106 usage_00192.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSSDDPITFGQGT--KVEI--- 105 usage_00202.pdb 60 RFSGSGSGTDFTLTISSLNPEDFATYYCQQHYSTPWTFGGGT--KVEI--- 105 usage_00203.pdb 61 RFSGSGSGTDFTLTISSLNPEDFATYYCQQHYSTPWTFGGGT--KVEI--- 106 usage_00257.pdb 61 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYIPVTFGQGT--KVEI--- 106 usage_00307.pdb 60 RFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGT--KVEI--- 105 usage_00310.pdb 61 RFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGT--KLDL--- 106 usage_00323.pdb 61 RFSGSGSGTDFTLTISSLQPEDFATYYCQSSSSPYTFGQGTK--VEI---- 105 RFSGS SGtdftlTISSL p D atY C q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################