################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:18 2021 # Report_file: c_0378_33.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00702.pdb # 2: usage_00711.pdb # 3: usage_00712.pdb # 4: usage_00728.pdb # 5: usage_00881.pdb # 6: usage_00910.pdb # 7: usage_00911.pdb # 8: usage_00986.pdb # 9: usage_01015.pdb # # Length: 100 # Identity: 20/100 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/100 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/100 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00702.pdb 1 MLPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGG-- 58 usage_00711.pdb 1 -----KPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKTSG-- 53 usage_00712.pdb 1 -----KPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKTSG-- 53 usage_00728.pdb 1 -----KPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGG-- 53 usage_00881.pdb 1 -----KPEIFKCRSPNKETFTCWWRPGTDG--T-NYSLTYHREGETLMHECPDYITGG-- 50 usage_00910.pdb 1 -----KPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKTSG-- 53 usage_00911.pdb 1 -----KPEIHKCRSPDKETFTCWWNPGT----T-NYSLTYSKEGEKTTYECPDYKTSG-- 48 usage_00986.pdb 1 ---------MDCVYYNWQYLLCSWKPG-----T-NYNLFYWYEGLDHALQCVDYI---KA 42 usage_01015.pdb 1 MLPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGG-- 58 kCrsp ketftCwW PG NYsLtY EGe eCpDY usage_00702.pdb 59 -PNSCHFGKQY-TSMWRTYIMMVNATNQMGSSFSDELYVD 96 usage_00711.pdb 54 -PNSCFFSKQY-TSIWKIYIITVNATNQMGSSSSDPLYVD 91 usage_00712.pdb 54 -PNSCFFSKQY-TSIWKIYIITVNATNQMGSSSSDPLYVD 91 usage_00728.pdb 54 -PNSCHFGKQY-TSMWRTYIMMVNATNQMGSSFSDELYVD 91 usage_00881.pdb 51 -PNSCHFGKQY-TSMWRTYIMMVNATNS---SFSDELYVD 85 usage_00910.pdb 54 -PNSCFFSKQY-TSIWKIYIITVNATNQMGSSSS------ 85 usage_00911.pdb 49 -PNSCFFSKQY-TSIWKIYIITVNAT-----SSSDPLYVD 81 usage_00986.pdb 43 QNIGCRFPYL-EASDYKDFYICVNGS--I--RSSYFTF-- 75 usage_01015.pdb 59 -PNSCHFGKQY-TSMWRTYIMMVNATNQMGSSFSDELYVD 96 pnsC F kq tS w yi VNat s S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################