################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:14 2021 # Report_file: c_0188_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00028.pdb # 2: usage_00035.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # # Length: 137 # Identity: 50/137 ( 36.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/137 ( 44.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/137 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --MPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK--EQCGC 56 usage_00035.pdb 1 NLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLA--NKPGV 58 usage_00043.pdb 1 --LPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANN-PGV 57 usage_00044.pdb 1 --LPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANN-PGV 57 usage_00045.pdb 1 -LMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLA--NKPGV 57 P aQVA G R L FG DY DGT RDYIH DLAdGH A L n pGv usage_00028.pdb 57 RIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAAL 116 usage_00035.pdb 59 HIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 118 usage_00043.pdb 58 RAWNLGTGRGSTVYEMIRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQR 117 usage_00044.pdb 58 RAWNLGTGRGSTVYEMIRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQR 117 usage_00045.pdb 58 HIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 117 NLG G G V AfsKA G Y apRR GD A EL W r usage_00028.pdb 117 GLDRMCEDLWRWQKQN- 132 usage_00035.pdb 119 TLDEMAQDTWHWQSRHP 135 usage_00043.pdb 118 TLEQACEDLWLWTKNNP 134 usage_00044.pdb 118 TLEQACEDLWLWTKNNP 134 usage_00045.pdb 118 TLDEMAQDTWHWQSRHP 134 tL D W W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################