################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:17 2021 # Report_file: c_0016_3.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00017.pdb # 11: usage_00022.pdb # 12: usage_00038.pdb # 13: usage_00056.pdb # 14: usage_00057.pdb # # Length: 333 # Identity: 117/333 ( 35.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 151/333 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 82/333 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -----RVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH 55 usage_00007.pdb 1 -----RVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH 55 usage_00008.pdb 1 -----RVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH 55 usage_00009.pdb 1 -----RVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH 55 usage_00010.pdb 1 SP---RVMQAQGSQLTNKFAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH 57 usage_00013.pdb 1 -P---RVMQAQGSQLTNKYAEGYPGKRYFGGCEYVDIVEQLAIDRAKELFGADYANVQPH 56 usage_00014.pdb 1 -P---RVMQAQGSQLTNKYAEGYPGKRYFGGCEYVDIVEQLAIDRAKELFGADYANVQPH 56 usage_00015.pdb 1 -P---RVMQAQGSQLTNKYAEGYPGKRYFGGCEYVDIVEQLAIDRAKELFGADYANVQPH 56 usage_00016.pdb 1 -P---RVMQAQGSQLTNKYAEGYPGKRYFGGCEYVDIVEQLAIDRAKELFGADYANVQPH 56 usage_00017.pdb 1 -----AVMEAQGSVLTNKYAQGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPH 55 usage_00022.pdb 1 -----AVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPH 55 usage_00038.pdb 1 --PEV----EVGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPN 54 usage_00056.pdb 1 ------RVQAQGSQLTNKYA--------------VDVVEQLAIDRAKELFGADYANVQPH 40 usage_00057.pdb 1 ------RVQAQGSQLTNKY----------------DVVEQLAIDRAKELFGADYANVQPH 38 aqGS LTNKy D vE LA RaK LFga ANVQPh usage_00006.pdb 56 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 112 usage_00007.pdb 56 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 112 usage_00008.pdb 56 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 112 usage_00009.pdb 56 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 112 usage_00010.pdb 58 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 114 usage_00013.pdb 57 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 113 usage_00014.pdb 57 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 113 usage_00015.pdb 57 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 113 usage_00016.pdb 57 SGSQANFAVYTALLEPGDTVLGM--NLAHGGHLTHGSPVNFSGKLYNIVPYGIDA-TGHI 113 usage_00017.pdb 56 SGAQANMAVYFTVLEHGDTVLGM--NLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVI 113 usage_00022.pdb 56 SGAQANMAVYFTVLEHGDTVLGM--NLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVI 113 usage_00038.pdb 55 SGSQANQGVYAALINPGDKILGDL--------------------KYESCFYGVEL-DGRI 93 usage_00056.pdb 41 SGSQANFAVYTALLQPGDTVLGNLA---------------FSGKLYNIVPYGIDE-SGKI 84 usage_00057.pdb 39 SGSQANFAVYTALLQPGDTVLGN---------------------LYNIVPYGIDE-SGKI 76 SG QAN aVY l GDtvLG Yn v YG d I usage_00006.pdb 113 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 172 usage_00007.pdb 113 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 172 usage_00008.pdb 113 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 172 usage_00009.pdb 113 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 172 usage_00010.pdb 115 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 174 usage_00013.pdb 114 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 173 usage_00014.pdb 114 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 173 usage_00015.pdb 114 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 173 usage_00016.pdb 114 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 173 usage_00017.pdb 114 DYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLH 173 usage_00022.pdb 114 DYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLH 173 usage_00038.pdb 94 DYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEH 153 usage_00056.pdb 85 DYDE-AKLAKEHKPK-IIGGFSAYSGVVDWAK-REIADSIGAYLFVD-AHVAGLIAAGVY 140 usage_00057.pdb 77 DYDE-AKLAKEHKPK-IIGGFSAYSGVVDWAK-REIADSIGAYLFVD-AHVAGLIAAGVY 132 DY A h PK I SAY D AK REIAD GAYL vD AH AGL aAG usage_00006.pdb 173 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 232 usage_00007.pdb 173 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 232 usage_00008.pdb 173 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 232 usage_00009.pdb 173 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 232 usage_00010.pdb 175 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 234 usage_00013.pdb 174 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 233 usage_00014.pdb 174 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 233 usage_00015.pdb 174 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 233 usage_00016.pdb 174 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKA 233 usage_00017.pdb 174 PNPVPYAHFVTTTTHKTLRGPRGGMILC--Q-EQFAKQIDKAIFPGIQGGPLMHVIAAKA 230 usage_00022.pdb 174 PNPVPYAHFVTTTTHKTLRGPRGGMILC--Q-EQFAKQIDKAIFPGIQGGPLMHVIAAKA 230 usage_00038.pdb 154 PSPFPYAHVVSSTTHKTLRGPRGGII-T--NDEELAKKINSAIFPGIQGGP-LHVIAAKA 209 usage_00056.pdb 141 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVF----GGP-LHVIAGKA 195 usage_00057.pdb 133 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFP---GGP-LHVIAGKA 188 PnPvP AH VttTTHKTL GPRGG I E K A F GGP HVIA KA usage_00006.pdb 233 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 292 usage_00007.pdb 233 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 292 usage_00008.pdb 233 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 292 usage_00009.pdb 233 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 292 usage_00010.pdb 235 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 294 usage_00013.pdb 234 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 293 usage_00014.pdb 234 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 293 usage_00015.pdb 234 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 293 usage_00016.pdb 234 VALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEA 293 usage_00017.pdb 231 VAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTA 290 usage_00022.pdb 231 VAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTA 290 usage_00038.pdb 210 VGFKFNLSDEWKVYAKQVRTNAQVLANVL-DRKFKLVSDGTDNHLVL-SFLDREFSGKDA 267 usage_00056.pdb 196 VALKEA-EPEFKVYQQQVAKNAKA-VEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEA 253 usage_00057.pdb 189 VALKEA-EPEFKVYQQQVAKNAKA-VEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEA 246 Va ea fK Y V NAk g VSgGT NHL L dl ltGK A usage_00006.pdb 293 DAALGRANITVNKNS------------------ 307 usage_00007.pdb 293 DAALGRANITVNKNS------------------ 307 usage_00008.pdb 293 DAALGRANITVNKNS------------------ 307 usage_00009.pdb 293 DAALGRANITVNKNS------------------ 307 usage_00010.pdb 295 DAALGRANITVNKNS------------------ 309 usage_00013.pdb 294 DAALGRANITVNKNSVPNDPKSPFVTSGIRVGT 326 usage_00014.pdb 294 DAALGRANITVNKNSVPNDPKSPFVTSGIRVGT 326 usage_00015.pdb 294 DAALGRANITVNKNSVPNDPKSPFVTSGIRVGT 326 usage_00016.pdb 294 DAALGRANITVNKNSVPNDPKSPFVTSGIRVGT 326 usage_00017.pdb 291 EKVLDEVGITVNKNTIPYDPESPFVTSGIRIGT 323 usage_00022.pdb 291 EKVLDEVGITVNKNTIPYDPESPFVTSGIRIGT 323 usage_00038.pdb 268 DLALGNAGITANKNT------------------ 282 usage_00056.pdb 254 DAALGRANITVNKNSVPNDPKSPFVTSGIRIGS 286 usage_00057.pdb 247 DAALGRANITVNKNSVPNDPKSPFVTSGIRIGS 279 L ITvNKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################