################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:06:49 2021 # Report_file: c_1319_228.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00083.pdb # 2: usage_00133.pdb # 3: usage_00134.pdb # 4: usage_00135.pdb # 5: usage_00250.pdb # 6: usage_00264.pdb # 7: usage_00327.pdb # 8: usage_00328.pdb # 9: usage_00407.pdb # 10: usage_00408.pdb # 11: usage_00453.pdb # 12: usage_00493.pdb # 13: usage_00516.pdb # 14: usage_00517.pdb # 15: usage_00710.pdb # 16: usage_00711.pdb # 17: usage_00713.pdb # 18: usage_00761.pdb # 19: usage_00801.pdb # 20: usage_00914.pdb # 21: usage_00915.pdb # 22: usage_00916.pdb # 23: usage_00917.pdb # 24: usage_00920.pdb # 25: usage_00921.pdb # 26: usage_00922.pdb # 27: usage_01366.pdb # 28: usage_01380.pdb # 29: usage_01607.pdb # 30: usage_01608.pdb # 31: usage_01921.pdb # 32: usage_01922.pdb # 33: usage_02107.pdb # 34: usage_02110.pdb # 35: usage_02125.pdb # 36: usage_02153.pdb # 37: usage_02156.pdb # 38: usage_02157.pdb # 39: usage_02158.pdb # 40: usage_02193.pdb # 41: usage_02210.pdb # 42: usage_02320.pdb # 43: usage_02386.pdb # # Length: 46 # Identity: 2/ 46 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 46 ( 52.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 46 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00133.pdb 1 TLDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 39 usage_00134.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00135.pdb 1 TLDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 39 usage_00250.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00264.pdb 1 -----DSYFWYKANWSEEPVLYLTQRRNADR---EKRTTAVTVY-- 36 usage_00327.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00328.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00407.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00408.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00453.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00493.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00516.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00517.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00710.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_00711.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_00713.pdb 1 -LEEIYDFLDLLVAENPHLVSKIQI------GNTY-EGRPIYVLKF 38 usage_00761.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_00801.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_00914.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_00915.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00916.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00917.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00920.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00921.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_00922.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_01366.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_01380.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_01607.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_01608.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_01921.pdb 1 TLEEIYDFLDLLVAENPHLVSKIQI------GNTY-EGRPIYVLKF 39 usage_01922.pdb 1 -LEEIYDFLDLLVAENPHLVSKIQI------GNTY-EGRPIYVLKF 38 usage_02107.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_02110.pdb 1 TLDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 39 usage_02125.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_02153.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_02156.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_02157.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 38 usage_02158.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_02193.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_02210.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQI------GRSY-EGRPIYVLKF 39 usage_02320.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 usage_02386.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQI------GRSY-EGRPIYVLKF 38 ydf dllva p lVsk qi y egrpiyVl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################