################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:45 2021 # Report_file: c_0530_10.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00113.pdb # # Length: 122 # Identity: 23/122 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/122 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/122 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 SPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSGTGTGIFIGTGNTGYKDLFHRANLPI 60 usage_00109.pdb 1 SPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSGTGTGIFIGTGNTGYKDLFHRANLPI 60 usage_00110.pdb 1 SQVEAEHIDPQERIFLQTVWHLLEDAGTSRAALSKVRTGVFVGLY-GHYQLYGVEEA--- 56 usage_00113.pdb 1 SPKDAEYMDPQLRMLLLHSWKAIEDAGYISKEIP-E-TSVYMSASTNSYRSLLP------ 52 Sp eA y DPQ R l vWkalEDAG s ls Tg f g Y l usage_00108.pdb 61 EGHAATGH----------MIPSVGPNRMSYFLNIHGPSEPVETACSSSLVAIHRAVTAMQ 110 usage_00109.pdb 61 EGHAATGH----------MIPSVGPNRMSYFLNIHGPSEPVETA-SSSLVAIHRAVTAMQ 109 usage_00110.pdb 57 --------L-RGTGAATSSSYASVANRVSYFFDFDGPSIALDT-CSSSLTALHLACRAIR 106 usage_00113.pdb 53 ---------EDGYVSWVLAQSGTIPTMISHKLGLKGPSYFVHANCSSSLIGLHSAFQSLQ 103 pnr Syfl GPS v t SSSL a H A a q usage_00108.pdb 111 N- 111 usage_00109.pdb 110 N- 110 usage_00110.pdb 107 D- 107 usage_00113.pdb 104 SG 105 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################