################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:49 2021 # Report_file: c_0547_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00068.pdb # 4: usage_00190.pdb # 5: usage_00191.pdb # 6: usage_00192.pdb # 7: usage_00193.pdb # 8: usage_00214.pdb # 9: usage_00215.pdb # # Length: 149 # Identity: 35/149 ( 23.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/149 ( 42.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/149 ( 16.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -----------APVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 45 usage_00034.pdb 1 -----------APVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 45 usage_00068.pdb 1 -AQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQ---RNGDQREALFN 56 usage_00190.pdb 1 TQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 56 usage_00191.pdb 1 TQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 56 usage_00192.pdb 1 -----------APVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 45 usage_00193.pdb 1 -----------APVLAEHGYDIIKCFYQRMFEAHPELKNVFNMA--HQEQ-G-QQQQALA 45 usage_00214.pdb 1 AEKTRSIIKATVPVLEQQGTVITRTFYKNMLTEHTELLNIFNRT--NQKV-G-AQPNALA 56 usage_00215.pdb 1 AEKTRSIIKATVPVLEQQGTVITRTFYKNMLTEHTELLNIFNRT--NQKV-G-AQPNALA 56 PvL G i FY M h EL n FN G q ala usage_00033.pdb 46 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 105 usage_00034.pdb 46 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 105 usage_00068.pdb 57 AIAAYAS-NIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFS--PGQEV 113 usage_00190.pdb 57 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 116 usage_00191.pdb 57 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 116 usage_00192.pdb 46 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 105 usage_00193.pdb 46 RAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDI 105 usage_00214.pdb 57 TTVLAAAKNIDDLSVLMDHVKQIGHKHRALQIKPEHYPIVGEYLLKAIKEVLGDAATPEI 116 usage_00215.pdb 57 TTVLAAAKNIDDLSVLMDHVKQIGHKHRALQIKPEHYPIVGEYLLKAIKEVLGDAATPEI 116 v a a NI d Lm k I KH l KPE YpIVGE LL aikEvlg at i usage_00033.pdb 106 ISAWAQAYGNLADVLMGMESELYERSAEQ 134 usage_00034.pdb 106 ISAWAQAYGNLADVLMGMESELYERSAEQ 134 usage_00068.pdb 114 LDAWGKAYGVLANVFINREAEIYNENASK 142 usage_00190.pdb 117 ISAWAQAYGNLADVLMGMESELYERSAEQ 145 usage_00191.pdb 117 ISAWAQAYGNLADVLMGMESELYERSAEQ 145 usage_00192.pdb 106 ISAWAQAYGNLADVLMGMESELYERSAEQ 134 usage_00193.pdb 106 ISAWAQAYGNLADVLMGMESELYERSAEQ 134 usage_00214.pdb 117 INAWGEAYQAIADIFITVEKKMYEE---- 141 usage_00215.pdb 117 INAWGEAYQAIADIFITVEKKMYEE---- 141 i AW AY Ad E Ye #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################