################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:20:09 2021 # Report_file: c_0138_7.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00031.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00034.pdb # 7: usage_00035.pdb # 8: usage_00044.pdb # 9: usage_00045.pdb # 10: usage_00046.pdb # 11: usage_00047.pdb # 12: usage_00098.pdb # 13: usage_00099.pdb # 14: usage_00102.pdb # 15: usage_00104.pdb # # Length: 199 # Identity: 89/199 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/199 ( 55.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/199 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 HRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYID 60 usage_00006.pdb 1 HRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYID 60 usage_00031.pdb 1 -RREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 59 usage_00032.pdb 1 -RREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 59 usage_00033.pdb 1 -RREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 59 usage_00034.pdb 1 -RKEIRRIAKIAFESAQGRRKKVTSVDKANVLACSVLWREVVEEVAKDYPDVELEHIYID 59 usage_00035.pdb 1 -RKEIRRIAKIAFESAQGRRKKVTSVDKANVLACSVLWREVVEEVAKDYPDVELEHIYID 59 usage_00044.pdb 1 SRREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 60 usage_00045.pdb 1 -RREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 59 usage_00046.pdb 1 -RREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 59 usage_00047.pdb 1 SRREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVELEHIYID 60 usage_00098.pdb 1 HRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYID 60 usage_00099.pdb 1 HRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYID 60 usage_00102.pdb 1 SRKEIRRIAKIAFESAQGRRKKVTSVDKANVLACSVLWREVVEEVAKDYPDVELEHIYID 60 usage_00104.pdb 1 -RKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVD 59 R ei RIA iAFE A RR KVTS DKANVL S LWR V A PDVEL H YiD usage_00005.pdb 61 NATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSA 120 usage_00006.pdb 61 NATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSA 120 usage_00031.pdb 60 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSA 119 usage_00032.pdb 60 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSA 119 usage_00033.pdb 60 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSA 119 usage_00034.pdb 60 NATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQGFGMYEPAGGSA 119 usage_00035.pdb 60 NATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQGFGMYEPAGGSA 119 usage_00044.pdb 61 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSA 120 usage_00045.pdb 60 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSA 119 usage_00046.pdb 60 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLASASMNSTGFGLFEPAGGSA 119 usage_00047.pdb 61 NATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLASASMNSTGFGLFEPAGGSA 120 usage_00098.pdb 61 NATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSA 120 usage_00099.pdb 61 NATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSA 120 usage_00102.pdb 61 NATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQGFGMYEPAGGSA 120 usage_00104.pdb 60 NAAMQLILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG-D-KNLYEPAGGSA 117 NAtMQL P FDV LcsNlFGDI SDE Am tGSmG L S S n fg EPAGGSA usage_00005.pdb 121 PDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARG-AAA- 178 usage_00006.pdb 121 PDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARG-AAA- 178 usage_00031.pdb 120 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQR- 177 usage_00032.pdb 120 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 178 usage_00033.pdb 120 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 178 usage_00034.pdb 120 PDIAGQGIANPVAQILSAALLLRHSLKLEDAALAIEAAVSKALSDGYLTCELLPA-SER- 177 usage_00035.pdb 120 PDIAGQGIANPVAQILSAALLLRHSLKLEDAALAIEAAVSKALSDGYLTCELLPA-SER- 177 usage_00044.pdb 121 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 179 usage_00045.pdb 120 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 178 usage_00046.pdb 120 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 178 usage_00047.pdb 121 PDIAGKGIANPIAQILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGELLSS-DQRH 179 usage_00098.pdb 121 PDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEGVRTGDLARG-AAA- 178 usage_00099.pdb 121 PDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEGVRTGDLARG-AAA- 178 usage_00102.pdb 121 PDIAGQGIANPVAQILSAALLLRHSLKLEDAALAIEAAVSKALNSGYLTGELLSS-DQR- 178 usage_00104.pdb 118 PDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKIERAVELVIEEGYRTRDIAEDPEKA- 176 PDIAG IANP AQILS Al Lr Sl aA aIE A al G T l usage_00005.pdb 179 --VSTDEMGDIIARYVAE- 194 usage_00006.pdb 179 --VSTDEMGDIIARYVAE- 194 usage_00031.pdb 178 ---------HKA------- 180 usage_00032.pdb 179 KAKTTVQMGDFIADAVKA- 196 usage_00033.pdb 179 KAKTTVQMGDFIADAVKAG 197 usage_00034.pdb ------------------- usage_00035.pdb 178 ---------SQA------- 180 usage_00044.pdb 180 KAKTTVQMGDFIADAVKA- 197 usage_00045.pdb 179 KAKTTVQMGDFIADAVKAG 197 usage_00046.pdb 179 KAKTTVQMGDFIADAVKA- 196 usage_00047.pdb 180 KAKTTVQMGDFIADAVKA- 197 usage_00098.pdb 179 --VSTDEMGDIIARYVAE- 194 usage_00099.pdb 179 --VSTDEMGDIIARYVAE- 194 usage_00102.pdb 179 ---------HKA------- 181 usage_00104.pdb 177 --VSTSQMGDLICKKLEE- 192 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################