################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:26:31 2021 # Report_file: c_1342_36.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00010.pdb # 2: usage_00057.pdb # 3: usage_00062.pdb # 4: usage_00092.pdb # 5: usage_00094.pdb # 6: usage_00113.pdb # 7: usage_00116.pdb # 8: usage_00122.pdb # 9: usage_00128.pdb # 10: usage_00256.pdb # 11: usage_00309.pdb # 12: usage_00312.pdb # 13: usage_00315.pdb # 14: usage_00317.pdb # 15: usage_00318.pdb # 16: usage_00400.pdb # 17: usage_00417.pdb # 18: usage_00419.pdb # 19: usage_00421.pdb # 20: usage_00465.pdb # 21: usage_00479.pdb # 22: usage_00519.pdb # 23: usage_00535.pdb # 24: usage_00537.pdb # 25: usage_00562.pdb # 26: usage_00577.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 40 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 40 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --TEEELSDLFRMFDKNADGYIDLEELKIMLQA-T----- 32 usage_00057.pdb 1 -----EIREAFRVFDKDGNGYISAAELRHVMTNL-----G 30 usage_00062.pdb 1 ---AAGFLQIWQHFDADDNGYIEGKELDDFFRH-LKKLQP 36 usage_00092.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00094.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00113.pdb 1 ---YADYMEAFKTFDREGQGFISGAELRHVLSGL------ 31 usage_00116.pdb 1 --SEETIRNAFGMFDELDTKKLNIEYIKDLLENM------ 32 usage_00122.pdb 1 -------REAFRVFDKDGNGYISAAELRHVMTNL------ 27 usage_00128.pdb 1 ----ETIRNAFAMFDEQETKKLNIEYIKDLLENM------ 30 usage_00256.pdb 1 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL------ 34 usage_00309.pdb 1 --SEEEIREAFRVFDKDGNGYISAAELRHVTNL------- 31 usage_00312.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVTNL------- 30 usage_00315.pdb 1 --SEEEIREAFRVFDKDGNGYISAAELRHVTNL------- 31 usage_00317.pdb 1 -DSEEEIREAFRVFDKDGNGYISAAELRHVTNL------- 32 usage_00318.pdb 1 --SEEEIREAFRVFDKDGNGYISAAELRHVT--------- 29 usage_00400.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00417.pdb 1 ----EEIREAFRVFDKDGNGYISAAELRHVMTNL------ 30 usage_00419.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00421.pdb 1 --SEEEIREAFRVFDKDGNGYISAAELRHVM--------- 29 usage_00465.pdb 1 -----EIREAFRVFDKDGNGYISAAELRHVMTNL------ 29 usage_00479.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00519.pdb 1 ----EEILRAFKVFDANGDGVIDFDEFKFI---------- 26 usage_00535.pdb 1 --SADDVKKVFHMLDKDKSGFIEEDELGFI---------- 28 usage_00537.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 usage_00562.pdb 1 ---FADYMEAFKTFDREGQGFISGAELRHVLTAL------ 31 usage_00577.pdb 1 ---EEEIREAFRVFDKDGNGYISAAELRHVMTNL------ 31 f fD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################