################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:45 2021 # Report_file: c_1033_103.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00093.pdb # 2: usage_00094.pdb # 3: usage_00095.pdb # 4: usage_00441.pdb # 5: usage_00543.pdb # 6: usage_00894.pdb # # Length: 68 # Identity: 5/ 68 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 68 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 68 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 DLTCFVGSEDIA-K-D-MEAWKDVTS----GNAKIYQLPGGHFYLLDPANEKLIKNYIIK 53 usage_00094.pdb 1 PVTVFTGDHDPRVSVGEA----RAWEEHTTGPADLRVLPGGHFFLVD--QAAPI--ATTE 52 usage_00095.pdb 1 PVTVFTGDHDPRVSVGEA----RAWEEHTTGPADLRVLPGGHFFLVD--QAAPMIATMTE 54 usage_00441.pdb 1 PLDWTVGAATPTES---FFDNIVTATKA---GVNIGLLPGMHFPYVS--HPDVFAKYVVE 52 usage_00543.pdb 1 PALVFSGSAGLMHS---LFEMQVVWAPRL-ANMRFASLPGGHFFVDR--FPDDTARILRE 54 usage_00894.pdb 1 -TTAFSAAADPIATPE-V----EAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGT 54 f g LPG HF usage_00093.pdb 54 CL-EVSSI 60 usage_00094.pdb 53 KLA----- 55 usage_00095.pdb 55 KL-A---- 57 usage_00441.pdb 53 TT-QKHL- 58 usage_00543.pdb 55 FL-SDARS 61 usage_00894.pdb 55 E------- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################