################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:25 2021 # Report_file: c_0773_4.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00032.pdb # 5: usage_00125.pdb # 6: usage_00229.pdb # 7: usage_00468.pdb # 8: usage_00517.pdb # 9: usage_00617.pdb # 10: usage_00641.pdb # 11: usage_00663.pdb # # Length: 77 # Identity: 4/ 77 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 77 ( 5.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 77 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00030.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00031.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00032.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00125.pdb 1 KTITIIGSGYIGAELAEAYSNQN--YNVNLIDGHERVL-YKYFDKEFTDI---------- 47 usage_00229.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00468.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00517.pdb 1 NNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL-GVYLDKEFTDV---------- 47 usage_00617.pdb 1 EDVTIIGGGAIGLE-AETFVELG--KKVRIERNDH--I-GTIYDGD-AEY---------- 43 usage_00641.pdb 1 GQYVVIGGNESGFDAAYQLAKNG--SDIALYTS-----PSVRL-SPYTRQ---------- 42 usage_00663.pdb 1 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA---------------TVGYLSGRYI 45 IG G A usage_00029.pdb 48 LTEEMEANNITIAT--- 61 usage_00030.pdb 48 LTEEMEANNITIAT--- 61 usage_00031.pdb 48 LTEEMEANNITIAT--- 61 usage_00032.pdb 48 LTEEMEANNITIAT--- 61 usage_00125.pdb 48 LAKDYEAHGVNLVL--- 61 usage_00229.pdb 48 LTEEMEANNITIAT--- 61 usage_00468.pdb 48 LTEEMEANNITIAT--G 62 usage_00517.pdb 48 LTEEMEANNITIAT--G 62 usage_00617.pdb 44 IYKEADKHHIEILT--N 58 usage_00641.pdb 43 RLGNVIKQGARIENVH- 58 usage_00663.pdb 46 TEEELRRQKIQLLL--- 59 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################