################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:07 2021 # Report_file: c_1180_160.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00702.pdb # 2: usage_01137.pdb # 3: usage_01171.pdb # 4: usage_01276.pdb # 5: usage_01544.pdb # 6: usage_01545.pdb # 7: usage_01839.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 75 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/ 75 ( 93.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00702.pdb 1 --------LI--EVRQN-----GEIRRGQV-----------L---------E-------- 17 usage_01137.pdb 1 ----------ASFVDDK---GTVYLASVAE---------V-A---------K-L-----K 22 usage_01171.pdb 1 GRKFVQGK---SIDVA-------------C-----------HPGYALPKAQ--------T 25 usage_01276.pdb 1 ----------AKIFCARQN-CSHDWGIHVKYK--TFEIPVI------------------- 28 usage_01544.pdb 1 -------R---DAISIR--QGR-----RVERA--PHFWRSQ----------W-RCVCIE- 29 usage_01545.pdb 1 -------R---DAISIR--QGR-----RVERAS-PHFWRSQ----------W-RCVCIE- 30 usage_01839.pdb 1 -------G---VSLVRV--RGR-----PLM---RHTNYSFS----------PWH------ 24 usage_00702.pdb 18 -VQEDKAVQIFE--- 28 usage_01137.pdb 23 WRVVV-------V-P 29 usage_01171.pdb 26 TVTC--------ME- 31 usage_01276.pdb 29 ----K---------- 29 usage_01544.pdb --------------- usage_01545.pdb --------------- usage_01839.pdb 25 GFTIH---------- 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################