################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:11 2021 # Report_file: c_0701_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00169.pdb # 2: usage_00170.pdb # 3: usage_00198.pdb # 4: usage_00214.pdb # 5: usage_00819.pdb # 6: usage_00820.pdb # 7: usage_01317.pdb # 8: usage_01436.pdb # 9: usage_01535.pdb # # Length: 74 # Identity: 22/ 74 ( 29.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 74 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 74 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00169.pdb 1 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKP----KKAKHKTQIKK 56 usage_00170.pdb 1 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMG-KKAKHKTQIKK 59 usage_00198.pdb 1 GRIYLKAEVTD--EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPD-PKNESKQKTKTIR 57 usage_00214.pdb 1 GRIYLKAEVTD--EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPD-PKNESKQKTKTIR 57 usage_00819.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHR 57 usage_00820.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHR 57 usage_01317.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHR 57 usage_01436.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHR 57 usage_01535.pdb 1 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHR 57 G L V L D G SDP VK L P K T usage_00169.pdb 57 KTLNPEFNEEFFYD 70 usage_00170.pdb 60 KTLNPEFNEEFFYD 73 usage_00198.pdb 58 STLNPQWNESFTFK 71 usage_00214.pdb 58 STLNPQWNESFTFK 71 usage_00819.pdb 58 KTLNPVFNEQFTFK 71 usage_00820.pdb 58 KTLNPVFNEQFTFK 71 usage_01317.pdb 58 KTLNPVFNEQFTFK 71 usage_01436.pdb 58 KTLNPVFNEQFTFK 71 usage_01535.pdb 58 KTLNPVFNEQFTFK 71 TLNP NE F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################