################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:02 2021 # Report_file: c_1274_42.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00069.pdb # 4: usage_00088.pdb # 5: usage_00089.pdb # 6: usage_00104.pdb # 7: usage_00105.pdb # 8: usage_00238.pdb # 9: usage_00503.pdb # 10: usage_00504.pdb # 11: usage_00565.pdb # # Length: 52 # Identity: 3/ 52 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 52 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 52 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 --LYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQNG 43 usage_00067.pdb 1 -SLYRVLILNDD-Y-T-PAEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 42 usage_00069.pdb 1 PSLYRVLILNDD-Y-T-PAEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 43 usage_00088.pdb 1 --LYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 41 usage_00089.pdb 1 --LYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 41 usage_00104.pdb 1 -SLYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQNG 44 usage_00105.pdb 1 -SLYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQNG 44 usage_00238.pdb 1 ---SVLNVAVTGETGSGKSSFINTLRG----IGNEEEGAA---KTGVVEVTM 42 usage_00503.pdb 1 --LYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 41 usage_00504.pdb 1 -SLYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 42 usage_00565.pdb 1 PSLYRVLILNDD-Y-T-PMEFVVYVLERFFNKSRED----ATRIMLHVHQ-- 43 yrvlilndd y t p eFvvyvle ksrEd imlhVhq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################