################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:21:13 2021 # Report_file: c_0276_4.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00003.pdb # 2: usage_00006.pdb # 3: usage_00016.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00035.pdb # 10: usage_00038.pdb # 11: usage_00039.pdb # 12: usage_00042.pdb # 13: usage_00043.pdb # 14: usage_00053.pdb # 15: usage_00054.pdb # # Length: 115 # Identity: 26/115 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/115 ( 31.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/115 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 EIVMTQSPGTLSLSPGERATLSCRASQSVS-M----NYLAWFQQKPGQAPRLLIYGASRR 55 usage_00006.pdb 1 --ELTQSPATLSLSPGERATLSCRASQSVG------RNLGWYQQKPGQAPRLLIYDASNR 52 usage_00016.pdb 1 -IVLTQSPATLSVTPGESVSLSCRASQSIS------NNLHWYQQKSHESPRLLIKYASQS 53 usage_00020.pdb 1 DIVLTQSPATMSASLGQRVSMSCSASSSVS-T----SYFHWYQQKPGSSPKLWIYSTSNL 55 usage_00021.pdb 1 DILLTQSPAILSVSPGERVSFSCRASQSIG------TDIHWYQQRTNGSPRLLIKYASES 54 usage_00022.pdb 1 -IQLTQSPAFMAASPGEKVTITCSVSSSIS-S----SNLHWYQQKSETSPKPWIYGTSNL 54 usage_00023.pdb 1 -IVMTQSPASLAVSLGQRATISCRASENVDK--YGNSFMHWYQQKPGQPPKLLIYRASEL 57 usage_00024.pdb 1 -IVMTQSPASLAVSLGQRATISCRASENVDK--YGNSFMHWYQQKPGQPPKLLIYRASEL 57 usage_00035.pdb 1 --VLTQSPAIMSASLGERVTMTCTASSSVS-S----SNLHWYQQKPGSSPKLWIYSTSNL 53 usage_00038.pdb 1 EVVLTQSPGTLALPPGERATLSCRASHRVG-S----TYIAWYQQKSGQAPRRLIYGASNR 55 usage_00039.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSVS-S----SYLAWYQQKPGQAPRLLIYGASSR 55 usage_00042.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSVF-S----TFLAWYQQKPGQAPRLLIYAASRR 55 usage_00043.pdb 1 --ELTQSPATLSLSPGERATLSCRASQSVG------RNLGWYQQKPGQAPRLLIYDASNR 52 usage_00053.pdb 1 -LVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00054.pdb 1 --VLTQSPGTLSLSPGETAIISCRTSQYG--------SLAWYQQRPGQAPRLVIYSGSTR 50 tQSP G C S WyQQ P I S usage_00003.pdb 56 ATGIPDRISGSGSGTDFTLTISRLEPADFAVYYCQQYGTSPRTFGQGAKVE---- 106 usage_00006.pdb 53 ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQARLLLPQTFGQGTKVEI--- 104 usage_00016.pdb 54 ISGIPSRFSGSGSGTDFTLSINSVETEDFGMYYCQQSNSWPLTFGAGTKLEL--- 105 usage_00020.pdb 56 ASGVPGRFSGSGSGTSYSLSISSMEAEDAATYYCHQFHRSPLTFGAGTKLEL--- 107 usage_00021.pdb 55 ISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRA 109 usage_00022.pdb 55 ASGVPVRFSGSGSGTSYSLTISSMEAEDAATYYCQQWNSYPYTFGGGTKLEI--- 106 usage_00023.pdb 58 QWGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQRSNEVPWTFGQGTKLEI--- 109 usage_00024.pdb 58 QWGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQRSNEVPWTFGQGTKLEI--- 109 usage_00035.pdb 54 ASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPYTFGGGTKLEI--- 105 usage_00038.pdb 56 ATDIPDRFSGSGSGTDFTLTIRRLEPEDSAVYYCQQFSVSPWTFGQGTRVEI--- 107 usage_00039.pdb 56 ATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGQGTKVEI--- 107 usage_00042.pdb 56 AAGIPDRFSGSESGTDFTLTISRLEPEDFAVYYCQQSESSPWTFGQGTKVDI--- 107 usage_00043.pdb 53 ATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQARLLLPQTFGQGTKVEI--- 104 usage_00053.pdb 60 ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEI--- 111 usage_00054.pdb 51 AAGIPDRFSGSRWGPDYTLTISNLESGDFGVYYCQQY----EFFGQGTKVQVDIK 101 g P RfsGS sGt L I D YYC tFG Gtk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################