################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:41 2021 # Report_file: c_0207_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00026.pdb # 2: usage_00048.pdb # 3: usage_00056.pdb # 4: usage_00060.pdb # 5: usage_00070.pdb # 6: usage_00071.pdb # 7: usage_00160.pdb # 8: usage_00161.pdb # 9: usage_00191.pdb # 10: usage_00202.pdb # 11: usage_00215.pdb # # Length: 128 # Identity: 13/128 ( 10.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/128 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/128 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 ---IQVTQPSVVLASSHGVASFPCEYSPSH-NTDEVRVTVLRQTN-DQMTEVCATTFTEK 55 usage_00048.pdb 1 --QLLESGPGLVRP--SETLSLTCTVSGFSLT--SFSVSWVRHPSGKGPEWMGRMWY--D 52 usage_00056.pdb 1 --QLKQSGPGLVQP--SQSLSITCTVSGFSLT--NYGVHWVRQSPGKGLEWLGVIWS--G 52 usage_00060.pdb 1 QVQLKESGPGLVAP--SQSLSITCTVSGFSVT--NYGVHWVRQPPGKGLEWLGVIWA--G 54 usage_00070.pdb 1 --QLKESGPGLVQP--SQSLSITCTVSGFSLT--TYGVHWVRQSPGKGLEWLGVIWS--G 52 usage_00071.pdb 1 ---LKESGPGLVQP--SQSLSITCTVSGFSLT--TYGVHWVRQSPGKGLEWLGVIWS--G 51 usage_00160.pdb 1 -VQLKQSGPGLVQP--SQSLSITCTVSGFSLT--NYGVHWVRQSPGKGLEWLGVIWS--G 53 usage_00161.pdb 1 -VQLKQSGPGLVQP--SQSLSITCTVSGFSLT--NYGVHWVRQSPGKGLEWLGVIWS--G 53 usage_00191.pdb 1 --QLTESGPGLVAP--SQSLSITCTVSGFSLT--SYGVHWVRQPPGKGLEWLVVIWS--D 52 usage_00202.pdb 1 DVQLQQSGPGLVAP--SQSLSITCTVSGFSLT--DYGVNWVRQSPGKGLEWLGVIWG--D 54 usage_00215.pdb 1 --QLKESGPGLVQP--SQSLSITCTVSGFSLT--TYGVHWVRQSPGKGLEWLGVIWS--G 52 l sgPglV p s lS tCtvSgfs t V wvRq kg ew w usage_00026.pdb 56 NTVGF-LD-YPFCSGTF-N--ESRVNLTIQGL-RAVDTGLYLCKVELMYPP-P-YFVGMG 107 usage_00048.pdb 53 GYTAYNSALKSRLSISRDTSKN-QVFLKMNSL-QTDDTGTYYCTRD--LY--G-GYPLGF 105 usage_00056.pdb 53 GNTDYNTPFTSRLSINKDNSKS-QVFFKMNSL-QSNDTAIYYCARA--LTYYDYEFAYWG 108 usage_00060.pdb 55 GITNYNSAFMSRLSISKDNSKS-QVFLKMNSL-QIDDTAMYYCASR--GGHYGYALDYWG 110 usage_00070.pdb 53 GSTDYNAAFISRLSISKDNSKS-HVFFKMNSL-QANDTAIYYCARM--RITTD-WFAYWG 107 usage_00071.pdb 52 GSTDYNAAFISRLSISKDNSKS-HVFFKMNSL-QANDTAIYYCARM--RITTD-WFAYWG 106 usage_00160.pdb 54 GNTDYNTPFTSRLSINKDNSKS-QVFFKMNSL-QSNDTAIYYCARA--LTYYDYEFAYWG 109 usage_00161.pdb 54 GNTDYNTPFTSRLSINKDNSKS-QVFFKMNSL-QSNDTAIYYCARA--LTYYDYEFAYWG 109 usage_00191.pdb 53 GSTTYNSALKSRLSISKDNSKS-QVFLKMNSLQT-DDTAMYYCARE---P--P--YGYWG 103 usage_00202.pdb 55 GITDYNSALKSRLSVTKDNSKS-QVFLKMNSL-QSGDSARYYCVTG--L------FDYWG 104 usage_00215.pdb 53 GSTDYNAAFISRLSISKDNSKS-HVFFKMNSL-QANDTAIYYCARM--RITTD-WFAYWG 107 g t y srlS n Vf kmnsL Dt YyC g usage_00026.pdb 108 NGTQIY-- 113 usage_00048.pdb 106 WYFDFWGP 113 usage_00056.pdb 109 QGTLVT-- 114 usage_00060.pdb 111 QGTSVTV- 117 usage_00070.pdb 108 QGTLVT-- 113 usage_00071.pdb 107 QGTLVT-- 112 usage_00160.pdb 110 QGTLVT-- 115 usage_00161.pdb 110 QGTLVT-- 115 usage_00191.pdb 104 QGTTLTVS 111 usage_00202.pdb 105 QGTTLTVS 112 usage_00215.pdb 108 QGTLVT-- 113 gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################