################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:09 2021 # Report_file: c_0495_22.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00152.pdb # 2: usage_00155.pdb # 3: usage_00169.pdb # 4: usage_00170.pdb # 5: usage_00236.pdb # 6: usage_00238.pdb # 7: usage_00239.pdb # 8: usage_00240.pdb # 9: usage_00257.pdb # # Length: 108 # Identity: 21/108 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/108 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/108 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00152.pdb 1 ---RALLEYLFE-VDYADHFVWVTEG-ALGPVIADARFVREG-HNA-TAEVAFTVGDDYQ 53 usage_00155.pdb 1 --TRALLEYLFE-VDYADHFVWVMTEGALGPVIADARFVREG-HNATMAEVAFTVGDDYQ 56 usage_00169.pdb 1 SP---ALH-YLSEVDYVDHFVWVVTDG--SDPVADARFVRDETD-PTVAEIAFTVADAYQ 53 usage_00170.pdb 1 SP---ALH-YLSEVDYVDHFVWVVTDG--SDPVADARFVRDETD-PTVAEIAFTVADAYQ 53 usage_00236.pdb 1 ----ALLEYLFE-VDYADHFVWVMTEGALGPVIADARFVREG-HNATMAAVAFTVGDDYQ 54 usage_00238.pdb 1 ---PALMHYLSE-VDYVDHFVWVVTDG--SDPVADARFVRDETD-PTVAEIAFTVADAYQ 53 usage_00239.pdb 1 ---SPALMHYLSEVDYVDHFVWVVTDG--SDPVADARFVRDETD-PTVAEIAFTVADAYQ 54 usage_00240.pdb 1 ---SPALMHYLSEVDYVDHFVWVVTDG--SDPVADARFVRDETD-PTVAEIAFTVADAYQ 54 usage_00257.pdb 1 ---CAKDVHRFTHHDFVDRVGLAATIG--GEFIATVRYDRI--A--DEAEVAFLVQDAHQ 51 vDy Dhfvwv t AdaRfvR Ae AFtV D yQ usage_00152.pdb 54 GRGIGSFL-GALIVSANYVGVQRFNARVLTDNARKIDRLG-------- 92 usage_00155.pdb 57 GRGIGSFLMGALIVSANYVGVQRFNARVLTDNMAM-----RKIM---- 95 usage_00169.pdb 54 GRGIGSFLIGALSVAARVDGVERFAARLSDNVPRT-----IDR----- 91 usage_00170.pdb 54 GRGIGSFLIGALSVAARVDGVERFAARLSDNVPRT-----IDR----- 91 usage_00236.pdb 55 GRGIGSFLMGALIVSANYVGVQRFNARVLTDNMAM-----RKIMDRLG 97 usage_00238.pdb 54 GRGIGSFLIGALSVAARVDGVERFAARMLSDNVPM-----RTIMDRYG 96 usage_00239.pdb 55 GRGIGSFLIGALSVAARVDGVERFAARMLSDNVPM-----RTIMDRYG 97 usage_00240.pdb 55 GRGIGSFLIGALSVAARVDGVERFAARMLSDNVPM-----RTIMDRYG 97 usage_00257.pdb 52 GRGVASALLEHIAAVARERGIRRFAAEVLPANNKM-----IKVFMDAG 94 GRGigSfL gal v A Gv RF Ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################