################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:44 2021 # Report_file: c_0100_6.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00005.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00067.pdb # 11: usage_00089.pdb # 12: usage_00090.pdb # 13: usage_00095.pdb # 14: usage_00097.pdb # # Length: 196 # Identity: 18/196 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/196 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/196 ( 21.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 KAVLFDLDGVITDPAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00037.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00038.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00039.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00058.pdb 1 KAVL-FLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 59 usage_00059.pdb 1 KAVL-FLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 59 usage_00060.pdb 1 A-VIFDDGV--LDTEPLYFEAYRRVAESYGKP-YTEDLHRRIG-VPEREGLPIL-EALEI 54 usage_00061.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00062.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00067.pdb 1 KAVIFDLDGVITDTAEYHFLAWKHIAEQIDIP-FDR-DNERLKGISREESLESILIFGGA 58 usage_00089.pdb 1 QGVIFDLDGVITDTAHLHFQAWQQIAAEIGIS-IDAQFNESLKGISRDESLRRILQHGGK 59 usage_00090.pdb 1 EAFIFDLDGVITDTAYYHYMAWRKLAHKVGID-IDTKFNESLKGISRMESLDRILEFGNK 59 usage_00095.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 usage_00097.pdb 1 KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 60 v ldg tDta hf Aw A gi d ne lk sr sL i usage_00005.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00037.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00038.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00039.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00058.pdb 60 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 114 usage_00059.pdb 60 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 114 usage_00060.pdb 55 --KD---SLENFKKRVHEEKKRVFSELL---KENPGVREALEFVKSKRIKLALATSTPQR 106 usage_00061.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00062.pdb 61 -----E-EFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 111 usage_00067.pdb 59 ETKYTNAEKQEL-HRKNRDYQ-LISKL-TPEDLLPGIGRLLCQLKNENIKIGLASSSR-- 113 usage_00089.pdb 60 EGDFNSQERAQLAYRKNLLYVHSLREL-TVNAVLPGIRSLLADLRAQQISVGLASVSL-- 116 usage_00090.pdb 60 KYSFSEEEKVRMAEEKNNYYVSLIDEI-TSNDILPGIESLLIDVKSNNIKIGLSSASK-- 116 usage_00095.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 usage_00097.pdb 61 K--VSAEEFKELAKRKNDNYVKMIQDV-SPADVYPGILQLLKDLRSNKIKIALASASK-- 115 e rkn y PGi lL Ik Las s usage_00005.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00037.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00038.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00039.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00058.pdb 115 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 172 usage_00059.pdb 115 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 172 usage_00060.pdb 107 EALERLRRLDLEKYFDV-VFGDQVKNGKP--DPEIYLLVLERLNVVPEKVVVFEDSKSGV 163 usage_00061.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00062.pdb 112 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 169 usage_00067.pdb 114 NAPKILRRLAIIDDFHAIV----------DPP-DIFLTAAA-LDVSPADCAAIEDAEAGI 161 usage_00089.pdb 117 NAPTILAALELREFFTFCADASQLKNSKP--DPEIFLAACAGLGVPPQACIGIEDAQAGI 174 usage_00090.pdb 117 NAINVLNHLGISDKFDFIADAGKCKNNKP--HPEIFLMSAKGLNVNPQNCIGIEDASAGI 174 usage_00095.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 usage_00097.pdb 116 NGPFLLERMNLTGYFDAIADPAEVAASKP--APDIFIAAAHAVGVAPSESIGLEDSQAGI 173 n L F If V P ED aGi usage_00005.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00037.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00038.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00039.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00058.pdb 173 QAIKDSGA-LPI-GVG 186 usage_00059.pdb 173 QAIKDSGA-LPI-GVG 186 usage_00060.pdb 164 EAAKSAGIERIY-GVV 178 usage_00061.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00062.pdb 170 QAIKDSGA-LPI-GVG 183 usage_00067.pdb 162 SAIKSAGF-AV-GV-- 173 usage_00089.pdb 175 DAINASGM-RSV-GIG 188 usage_00090.pdb 175 DAINSANM-FSV-GVG 188 usage_00095.pdb 174 QAIKDSGA-LPI-GVG 187 usage_00097.pdb 174 QAIKDSGA-LPI-GVG 187 Ai g g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################