################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:04 2021 # Report_file: c_0301_14.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00054.pdb # 2: usage_00071.pdb # 3: usage_00096.pdb # 4: usage_00097.pdb # 5: usage_00104.pdb # 6: usage_00115.pdb # # Length: 147 # Identity: 6/147 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/147 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/147 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 ---CAVVPAAGFGRR----MQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPG 53 usage_00071.pdb 1 SEMSLIMLAAGNSTR----FNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-- 54 usage_00096.pdb 1 MSYDVVIPAAG----QGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQ 56 usage_00097.pdb 1 MSYDVVIPAAG----QGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQ 56 usage_00104.pdb 1 ---GVIILAAG-------------DKLLAKIDNTPII-RTIRIYG----DLEKIIIVG-K 38 usage_00115.pdb 1 MSYDVVIPA---------------NKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQ 45 A K p usage_00054.pdb 54 D-SRFAQ----LPLANHP--QITVVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCL 104 usage_00071.pdb 55 NITYMKKFTK----------NYEFIEG--GDTRAESLKKALELI-DSEFVMVSDVARVLV 101 usage_00096.pdb 57 EREHFQQLLSDYPF----QTSIELVAG--GDERQHSVYKGLKAVKQEKIVLVHDGARPFI 110 usage_00097.pdb 57 EREHFQQLLSDYPF----QTSIELVAG--GDERQHSVYKGLKAVKQEKIVLVHDGARPFI 110 usage_00104.pdb 39 YVNEL-P-----LL----DQIVIYNPFWN-EGISTSLKLGLRFFKDYDAVLVALGD-PFV 86 usage_00115.pdb 46 EREHFQQLLSDYPF----QTSIELVAG--GDERQHSVYKGLKAVKQEKIVLVHDGARPFI 99 g d r S gL VlV d a p usage_00054.pdb 105 HQDDLARLLALSE-TSRTGGILAAPVR 130 usage_00071.pdb 102 SKNLFDRLIENLD-KAD-CITPALKVA 126 usage_00096.pdb 111 KHEQIDELIAEAE-QTG-AAILAVP-- 133 usage_00097.pdb 111 KHEQIDELIAEAE-QTG-AAILAVPVK 135 usage_00104.pdb 87 TKEDVNKIINTFKPNCK-AVIPTH--- 109 usage_00115.pdb 100 KHEQIDELIAEAE-QTG-AAILAVP-- 122 li i a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################