################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:48 2021 # Report_file: c_0398_81.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00010.pdb # 2: usage_00024.pdb # 3: usage_00026.pdb # 4: usage_00147.pdb # 5: usage_00149.pdb # 6: usage_00151.pdb # 7: usage_00236.pdb # 8: usage_00547.pdb # 9: usage_00580.pdb # 10: usage_00582.pdb # 11: usage_00773.pdb # 12: usage_00775.pdb # 13: usage_00807.pdb # # Length: 88 # Identity: 35/ 88 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 88 ( 42.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 88 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 ----------SSTYELFNEKGELSEKKITRADKSSTYELFNEKGELSLKYITRADGTRLE 50 usage_00024.pdb 1 SEKYITRADKSSTYEKFNEKGELSEKYITRADKSSTYEKFNEKGEVSEKYITRADGTRLE 60 usage_00026.pdb 1 -EKKITRADKSSTYEKFNEKGELSEKKITRADKSSTYEKFNEKGEVSEKIITRADGTRLE 59 usage_00147.pdb 1 -EKKITRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGELSEKKITRADKSSTE 59 usage_00149.pdb 1 -EKKITRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGELSEKKITRADKSSTE 59 usage_00151.pdb 1 -EKKITRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGELSEKKITRADKSSTE 59 usage_00236.pdb 1 -EKKITRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGEVSEKIITRADGTRLE 59 usage_00547.pdb 1 -----------STEEKFNEKGELSEKKITRADKSSTEEKFNEKGEVSEKIITRADGTRLE 49 usage_00580.pdb 1 SFKYITRADKSSTYELFNEKGELSFKYITRADKSSTYELFNEKGELSFKYITRADGTRLE 60 usage_00582.pdb 1 ---------KSSTYELFNEKGELSFKYITRADKSSTYELFNEKGELSFKYITRADGTRLE 51 usage_00773.pdb 1 ----------SSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADKSSTF 50 usage_00775.pdb 1 SFKLITRADKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADGTRLE 60 usage_00807.pdb 1 -EKKITRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGEVSEKIITRADGTRLE 59 ST E FNEKGELS K ITRADKSST E FNEKGE S K ITRAD e usage_00010.pdb 51 YTGIKSDGSGKAKEVLKGYVLEGTLTA- 77 usage_00024.pdb 61 YTGIKSDGSGKAKEVL------------ 76 usage_00026.pdb 60 YTGIKSDGSGKAKEVL------------ 75 usage_00147.pdb 60 EKFNEKGELSEKKITR------------ 75 usage_00149.pdb 60 EKFNEKGELSEKKITR------------ 75 usage_00151.pdb 60 EKFNEKGELSEKKITR------------ 75 usage_00236.pdb 60 YTGIKSDGSGKAKEVL------------ 75 usage_00547.pdb 50 YTGIKSDGSGKAKEVLKGYVLEG----- 72 usage_00580.pdb 61 YTGIKSDGSGKAKEVL------------ 76 usage_00582.pdb 52 YTGIKSDGSGKAKEVLKGYVLEGTLTA- 78 usage_00773.pdb 51 ELFNEKGELSFKLITRADGTRLEY-T-G 76 usage_00775.pdb 61 YTGIKSDGSGKAKEVL------------ 76 usage_00807.pdb 60 YTGIKSDGSGKAKEVL------------ 75 k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################