################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:22 2021 # Report_file: c_0634_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00084.pdb # # Length: 116 # Identity: 92/116 ( 79.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/116 ( 90.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/116 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 ----LSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLT 56 usage_00067.pdb 1 APDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDY-VPLHHFYLT 59 usage_00068.pdb 1 -----SVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLT 55 usage_00069.pdb 1 ----LSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLT 56 usage_00070.pdb 1 ----LSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLT 56 usage_00084.pdb 1 ----LNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 56 sVVKKsLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEdY VPLHhFyLT usage_00066.pdb 57 PESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYK--- 109 usage_00067.pdb 60 PESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYK--- 112 usage_00068.pdb 56 PESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYK--- 108 usage_00069.pdb 57 PESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTK----- 107 usage_00070.pdb 57 PESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTK----- 107 usage_00084.pdb 57 PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 112 PeSFdQKVhNVSFAFELMlDGGLkKPKaRPEDvVNlDLKSTLRVLYNLFTK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################