################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:25 2021 # Report_file: c_1442_93.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_02219.pdb # 2: usage_02220.pdb # 3: usage_02255.pdb # 4: usage_02256.pdb # 5: usage_02823.pdb # 6: usage_03884.pdb # 7: usage_04218.pdb # 8: usage_05147.pdb # 9: usage_09134.pdb # 10: usage_10324.pdb # 11: usage_11696.pdb # 12: usage_12970.pdb # 13: usage_14580.pdb # 14: usage_19982.pdb # # Length: 73 # Identity: 0/ 73 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 73 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/ 73 ( 91.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02219.pdb 1 -SIVGRPR-H-----------------------------LTLKYPI-------------- 15 usage_02220.pdb 1 -SIVGRPR-H-----------------------------LTLKYPI-------------- 15 usage_02255.pdb 1 -SIVGR---------------------------------PTLKYPI-------------- 12 usage_02256.pdb 1 -SIVGR---------------------------------PTLKYPI-------------- 12 usage_02823.pdb 1 --SMARRN-L----------------------DSLEARAFQSTPIV-----VQMTKLA-- 28 usage_03884.pdb 1 -GYRGKHH-------------------------------TAVVDVD------------KK 16 usage_04218.pdb 1 -SIVGRPR-----------D-SYVGDEAQSKR-----GILTLKYPI-------------- 28 usage_05147.pdb 1 S--------------------------------------IVGRPRHDSYVG--------- 13 usage_09134.pdb 1 --IVGRPRHQGVMVGMGQKD-SYVGDEAQSKR-----GILTLKYPI-------------- 38 usage_10324.pdb 1 -SIVGRPR-------------SYVGDEAQSKR-----GILTLKYPI-------------- 27 usage_11696.pdb 1 -SIVGRPR-------------SYVGDEAQSKR-----GILTLKYPI-------------- 27 usage_12970.pdb 1 -SIVGR---------------SYVGDEAQS---------LTLKYPI-------------- 21 usage_14580.pdb 1 -SIIGIP------------KECYVGDEAQNKR-----GILTLKYP--------------- 27 usage_19982.pdb 1 -SIVGRP------------D-SYVGDEAQSKR-----GILTLKYPI-------------- 27 usage_02219.pdb ------------- usage_02220.pdb ------------- usage_02255.pdb ------------- usage_02256.pdb ------------- usage_02823.pdb ------------- usage_03884.pdb 17 AQHDVLDFWEPLF 29 usage_04218.pdb ------------- usage_05147.pdb ------------- usage_09134.pdb ------------- usage_10324.pdb ------------- usage_11696.pdb ------------- usage_12970.pdb ------------- usage_14580.pdb ------------- usage_19982.pdb ------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################