################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:17 2021 # Report_file: c_1407_36.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00034.pdb # 2: usage_00132.pdb # 3: usage_00144.pdb # 4: usage_00254.pdb # 5: usage_00278.pdb # 6: usage_00653.pdb # 7: usage_00668.pdb # 8: usage_00813.pdb # 9: usage_00935.pdb # 10: usage_00936.pdb # 11: usage_00943.pdb # 12: usage_00944.pdb # 13: usage_00945.pdb # 14: usage_00976.pdb # 15: usage_01074.pdb # 16: usage_01099.pdb # 17: usage_01211.pdb # # Length: 85 # Identity: 9/ 85 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 85 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 85 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_00132.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFLILTEMATSHVQILVEFTKRLPGFQTL 46 usage_00144.pdb 1 --QEITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 45 usage_00254.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_00278.pdb 1 --TETYVEAN-----MGLNPSSPN------DPVTNICQAADKQLFTLVEWAKRIPHFSEL 47 usage_00653.pdb 1 ---EITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 44 usage_00668.pdb 1 ----------PLQEQS---------KEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNL 41 usage_00813.pdb 1 --QEITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 45 usage_00935.pdb 1 ---EITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 44 usage_00936.pdb 1 MPQEITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 47 usage_00943.pdb 1 MPQEITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 47 usage_00944.pdb 1 -PQEITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_00945.pdb 1 -PQEITNKIL-----KE-------AF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_00976.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFEILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_01074.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 usage_01099.pdb 1 -PQEITNKIL-----KE--------E-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 45 usage_01211.pdb 1 -PQEITNKIL-----KE-------EF-SAEENFLILTEMATNHVQVLVEFTKKLPGFQTL 46 f a vq lvE K PgF L usage_00034.pdb 47 DHEDQIALLKG-------------- 57 usage_00132.pdb 47 DHEDQIALLKGSAVEAMFLRSAEI- 70 usage_00144.pdb 46 DHEDQIALLKG-------------- 56 usage_00254.pdb 47 DHEDQIALLKG-------------- 57 usage_00278.pdb 48 PLDDQVILLRAG------------- 59 usage_00653.pdb 45 DHEDQIALLKG-------------- 55 usage_00668.pdb 42 DLNDQVTLLKYGVHEIIYTMLASLM 66 usage_00813.pdb 46 DHEDQIALLKGS------------- 57 usage_00935.pdb 45 DHEDQIALLKGSA------------ 57 usage_00936.pdb 48 DHEDQIALLKG-------------- 58 usage_00943.pdb 48 DHEDQIALLKGS------------- 59 usage_00944.pdb 47 DHEDQIALLKGS------------- 58 usage_00945.pdb 47 DHEDQIALLKG-------------- 57 usage_00976.pdb 47 DHEDQIALLKG-------------- 57 usage_01074.pdb 47 DHEDQIALLKG-------------- 57 usage_01099.pdb 46 DHEDQIALLKGSA------------ 58 usage_01211.pdb 47 DHEDQIALLKG-------------- 57 d DQ LLk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################