################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:36:47 2021 # Report_file: c_0145_28.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00068.pdb # 2: usage_00101.pdb # 3: usage_00237.pdb # 4: usage_00238.pdb # 5: usage_00241.pdb # 6: usage_00242.pdb # 7: usage_00243.pdb # 8: usage_00244.pdb # 9: usage_00309.pdb # 10: usage_00354.pdb # 11: usage_00355.pdb # 12: usage_00361.pdb # 13: usage_00380.pdb # 14: usage_00445.pdb # 15: usage_00446.pdb # 16: usage_00447.pdb # 17: usage_00463.pdb # 18: usage_00464.pdb # 19: usage_00492.pdb # 20: usage_00493.pdb # 21: usage_00543.pdb # # Length: 127 # Identity: 29/127 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/127 ( 33.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/127 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 VQLLQPGAELVKPGASVKLSCKASGYTFTSYWMYWVKQRPGQGLEWIGEIDPSDSYTNYN 60 usage_00101.pdb 1 VQLVQSGAEVVKPGASVKVSCKASGYAFSSSWMNWVRQAPGQGLEWIGRIYPGDGDTNYA 60 usage_00237.pdb 1 VQLQQSGAELARPGASVKLSCRTSGYSFTTYWMQWVRQRPGQGLEWIAAIYPGDDDARYT 60 usage_00238.pdb 1 VQLQQSGAELARPGASVKLSCRTSGYSFTTYWMQWVRQRPGQGLEWIAAIYPGDDDARYT 60 usage_00241.pdb 1 VKLEQSGAELARPGASVKLSCKASGYTFASYWMQWVKQRPGQGLEWIGAIYPGDGDTWYT 60 usage_00242.pdb 1 VKLEQSGAELARPGASVKLSCKASGYTFASYWMQWVKQRPGQGLEWIGAIYPGDGDTWYT 60 usage_00243.pdb 1 VKLEQSGAELARPGASVKLSCKASGYTFASYWMQWVKQRPGQGLEWIGAIYPGDGDTWYT 60 usage_00244.pdb 1 VKLEQSGAELARPGASVKLSCKASGYTFASYWMQWVKQRPGQGLEWIGAIYPGDGDTWYT 60 usage_00309.pdb 1 VNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQGLEWIGGIYPGNRDTRYT 60 usage_00354.pdb 1 VQLQESGTVLARPGASVKMSCKASGYSFTSYWMHWIKQRPGQGLEWIGGVYPGDSHTSYN 60 usage_00355.pdb 1 VQLQESGTVLARPGASVKMSCKASGYSFTSYWMHWIKQRPGQGLEWIGGVYPGDSHTSYN 60 usage_00361.pdb 1 VQLVQSGAEVKKPGESLKISCKGSEYSFPNYWIAWVRQMPGKGLEWMGMIYPGDSDTRYS 60 usage_00380.pdb 1 VQLSQSGTVLARPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGAIYPGNSDTSYN 60 usage_00445.pdb 1 VQLQESGTVLARPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGAIYPGNSDTSYN 60 usage_00446.pdb 1 VQLQQSGTVLARPGASVKMSCEASGYTFTSYWMHWLKKRPGQGLEWIGTIYPGNSDSSYN 60 usage_00447.pdb 1 VQLQQSGTVLARPGASVKMSCEASGYTFTSYWMHWLKKRPGQGLEWIGTIYPGNSDSSYN 60 usage_00463.pdb 1 VQLQQSGPELVKPGASVKISCKASGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGETNYS 60 usage_00464.pdb 1 VQLQQSGPELVKPGASVKISCKASGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGETNYS 60 usage_00492.pdb 1 VQLEESGAELARPGSSVKLSCKASGYTFTNYWLQWVKQRTGQGLEWIGAIYPRDGDAKYS 60 usage_00493.pdb 1 VQLEESGAELARPGSSVKLSCKASGYTFTNYWLQWVKQRTGQGLEWIGAIYPRDGDAKYS 60 usage_00543.pdb 1 VNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQGLEWIGGIYPGNRDTRYT 60 V L sG PG Sv SC SgY F W W GqGLEWi yP Y usage_00068.pdb 61 QNFKGKATLTVDKSSSTAFMQLSSLTSQDSAVYFCARSPHYYG---TTY--NYPMDYWG- 114 usage_00101.pdb 61 QKFQGKATLTADKSTSTAYMELSSLRSEDTAVYFCAREY-------------DE-AYWGQ 106 usage_00237.pdb 61 QKFKGKATLTADRSSSIVYLQLNSLTSEDSAVYSCSRGRS---------L-YYTMDYWGQ 110 usage_00238.pdb 61 QKFKGKATLTADRSSSIVYLQLNSLTSEDSAVYSCSRGRS---------L-YYTMDYWGQ 110 usage_00241.pdb 61 QKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARPPYY-----Y-G-TTYYFDYWGQ 113 usage_00242.pdb 61 QKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARPPYY-----Y-G-TTYYFDYWGQ 113 usage_00243.pdb 61 QKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARPPYY-----Y-G-TTYYFDYWGQ 113 usage_00244.pdb 61 QKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARPPYY-----Y-G-TTYYFDYWGQ 113 usage_00309.pdb 61 QRFKDKAKLTAVTSANTAYMELSSLTNEDSAVYYCSIIYFD-----Y-A--DFIMDYWGQ 112 usage_00354.pdb 61 QKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYCTRSGFD-----------YGNEDWGQ 109 usage_00355.pdb 61 QKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYCTRSGFD-----------YGNEDWGQ 109 usage_00361.pdb 61 PSFQGQVNISADKSSRTAFLEWSSLKASDSATYFCARLGG-QLWNSYYY--YYYMDVWGK 117 usage_00380.pdb 61 QKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYCTRWPHYYG---G-S--RYYFDYWGQ 114 usage_00445.pdb 61 QKFKGKAKLTAVTSTSTAYMELSSLTNEDSAVYYCTRERG-LY---Y-G--SSSFDYWGQ 113 usage_00446.pdb 61 QRFKGKAKLTAVTSTSTAYMELSSLTNEDSAVYYCTRERGL-----Y-Y-GGRSFDYWGQ 113 usage_00447.pdb 61 QRFKGKAKLTAVTSTSTAYMELSSLTNEDSAVYYCTRERG-LY---Y-G--GRSFDYWGQ 113 usage_00463.pdb 61 EKFKGKATLTADKSSSTAYMHLSSLTSVDSAVYFCARGGY-RY---D-P--YYAMDYWGQ 113 usage_00464.pdb 61 EKFKGKATLTADKSSSTAYMHLSSLTSVDSAVYFCARGGY-RY---D-P--YYAMDYWGQ 113 usage_00492.pdb 61 QKFKDKASLTVNESSSTAYMHLSALASEDSAVYYCARANYG-------L--YYAMDRWGQ 111 usage_00493.pdb 61 QKFKDKASLTVNESSSTAYMHLSALASEDSAVYYCARANYG-------L--YYAMDRWGQ 111 usage_00543.pdb 61 QRFKDKAKLTAVTSANTAYMELSSLTNEDSAVYYCSIIYFD-----Y-A--DFIMDYWGQ 112 F ka lt S l L DsAvY C WG usage_00068.pdb ------- usage_00101.pdb 107 GTLVTVS 113 usage_00237.pdb 111 GTSVTV- 116 usage_00238.pdb 111 GTSVTV- 116 usage_00241.pdb 114 GTTLTVS 120 usage_00242.pdb 114 GTTLTVS 120 usage_00243.pdb 114 GTTLTVS 120 usage_00244.pdb 114 GTTLTVS 120 usage_00309.pdb 113 GTTVTVS 119 usage_00354.pdb 110 GTTLTVS 116 usage_00355.pdb 110 GTTLTVS 116 usage_00361.pdb 118 GTTVTVS 124 usage_00380.pdb 115 GTTLTV- 120 usage_00445.pdb 114 GTTLTVS 120 usage_00446.pdb 114 GTTLTVS 120 usage_00447.pdb 114 GTTLTVS 120 usage_00463.pdb 114 GTSVTVS 120 usage_00464.pdb 114 GTSVTVS 120 usage_00492.pdb 112 GTSVTVS 118 usage_00493.pdb 112 GTSVTVS 118 usage_00543.pdb 113 GTTVTVS 119 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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