################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:34 2021 # Report_file: c_0865_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00086.pdb # 8: usage_00087.pdb # 9: usage_00122.pdb # 10: usage_00123.pdb # 11: usage_00124.pdb # # Length: 100 # Identity: 56/100 ( 56.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/100 ( 56.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/100 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00016.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00017.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00018.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00019.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00020.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00086.pdb 1 NHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRP 60 usage_00087.pdb 1 NHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRP 60 usage_00122.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 usage_00123.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLR- 59 usage_00124.pdb 1 NHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRS 60 NHAIA VAVALKQA TP F EY QV N RA AL E GY V GG DNHL LVDLR usage_00015.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00016.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00017.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00018.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00019.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00020.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 usage_00086.pdb 61 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 100 usage_00087.pdb 61 KGLDGARAERVLELVSITANKNT----------------- 83 usage_00122.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSG----- 95 usage_00123.pdb 60 KGTDGGRAEKVLEACSIACNKNTCPG-K--LRPSGLRLGT 96 usage_00124.pdb 61 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT 100 KG DG RAE VLE SI NKNT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################