################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:57 2021 # Report_file: c_1255_83.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00399.pdb # 4: usage_00400.pdb # 5: usage_00401.pdb # 6: usage_00515.pdb # 7: usage_00533.pdb # 8: usage_00595.pdb # 9: usage_01654.pdb # 10: usage_01655.pdb # # Length: 45 # Identity: 5/ 45 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 45 ( 17.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 45 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -LGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMG- 43 usage_00020.pdb 1 -LGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMG- 43 usage_00399.pdb 1 ALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVG- 44 usage_00400.pdb 1 ALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVG- 44 usage_00401.pdb 1 ALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVG- 44 usage_00515.pdb 1 -LGIAFIGYFVEKPPNAAALEAAQDLIQAVVEGYLT-PNYLLMG- 42 usage_00533.pdb 1 -TGIAFIGNFVDKLPSDAALQAAKDLLACGVQQGELSEDYALIA- 43 usage_00595.pdb 1 -LGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMG- 43 usage_01654.pdb 1 LVVAFIG-------PSSSNKKIALELIKQGIKLGHISKNYSLIDD 38 usage_01655.pdb 1 LVVAFIG-------PSSSNKKIALELIKQGIKLGHISKNYSLID- 37 P A Li g nY L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################