################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:56:01 2021 # Report_file: c_0020_8.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00043.pdb # 6: usage_00044.pdb # 7: usage_00045.pdb # 8: usage_00046.pdb # 9: usage_00047.pdb # 10: usage_00048.pdb # 11: usage_00049.pdb # 12: usage_00050.pdb # 13: usage_00051.pdb # 14: usage_00052.pdb # 15: usage_00053.pdb # 16: usage_00054.pdb # 17: usage_00105.pdb # 18: usage_00106.pdb # # Length: 220 # Identity: 194/220 ( 88.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 196/220 ( 89.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/220 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00027.pdb 1 -VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 59 usage_00028.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00029.pdb 1 TVKVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00043.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00044.pdb 1 -VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 59 usage_00045.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00046.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00047.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00048.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00049.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00050.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00051.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00052.pdb 1 -VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 59 usage_00053.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00054.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00105.pdb 1 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 usage_00106.pdb 1 TVKVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 60 VKVEIEDGIAFVILNRPE RNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG usage_00026.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACD 120 usage_00027.pdb 60 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACD 119 usage_00028.pdb 61 MDLKEYFREV--GPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACD 118 usage_00029.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACD 120 usage_00043.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00044.pdb 60 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 119 usage_00045.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00046.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00047.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00048.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00049.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00050.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00051.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00052.pdb 60 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 119 usage_00053.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00054.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00105.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 usage_00106.pdb 61 MDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACD 120 MDLKEYFREV GPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGF PLVACD usage_00026.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00027.pdb 120 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 179 usage_00028.pdb 119 LAICADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 178 usage_00029.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00043.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVN 180 usage_00044.pdb 120 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 179 usage_00045.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00046.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00047.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00048.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00049.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00050.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00051.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00052.pdb 120 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 179 usage_00053.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00054.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00105.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 usage_00106.pdb 121 LAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVN 180 LAICADEATFGLSEINwGIPPGNLVSKAMADTVGHRQSLyYIMTGKTFGGQKAAEMGLVN usage_00026.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00027.pdb 180 ESVPLAQLREVTIELARNLLE------------------- 200 usage_00028.pdb 179 ESVPLAQLREVTIELARNLLE------------------- 199 usage_00029.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00043.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00044.pdb 180 ESVPLAQLREVTIELARNLLE------------------- 200 usage_00045.pdb 181 ESVPLAQLREVTIELARNLLE------------------- 201 usage_00046.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00047.pdb 181 ESVPLAQLREVTIELARNLLE------------------- 201 usage_00048.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKR---- 216 usage_00049.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00050.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00051.pdb 181 ESVPLAQLREVTIELARNLLE------------------- 201 usage_00052.pdb 180 ESVPLAQLREVTIELARNLLE------------------- 200 usage_00053.pdb 181 ESVPLAQLREVTIELARNLLE------------------- 201 usage_00054.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00105.pdb 181 ESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCREL 220 usage_00106.pdb 181 ESVPLAQLREVTIELARNLLE------------------- 201 ESVPLAQLREVTIELARNLLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################