################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:33 2021 # Report_file: c_1442_164.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00185.pdb # 2: usage_01273.pdb # 3: usage_01486.pdb # 4: usage_01885.pdb # 5: usage_03478.pdb # 6: usage_03543.pdb # 7: usage_03544.pdb # 8: usage_04454.pdb # 9: usage_04866.pdb # 10: usage_06511.pdb # 11: usage_06512.pdb # 12: usage_07134.pdb # 13: usage_11883.pdb # 14: usage_16149.pdb # 15: usage_17270.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 49 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 49 ( 77.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00185.pdb 1 -----------EWRIIYA-AA-DNKDKIVEGGPL--RNYYRR------- 27 usage_01273.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 usage_01486.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 usage_01885.pdb 1 -----E-----KVVIDE---------SVID-----GQSEPLL-IY---- 20 usage_03478.pdb 1 -----------KWYTIVI-AA-DNLEKIEEGGPL--RFYFRH------- 27 usage_03543.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 usage_03544.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 usage_04454.pdb 1 ------------TYYCTGKVWQ---L-------D-YESEPLN--ITVIK 24 usage_04866.pdb 1 ---GRY-----FMVAAPL-KL-VGTD-------A-APARVLL--FD--- 26 usage_06511.pdb 1 -----------TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 28 usage_06512.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 usage_07134.pdb 1 NTW--F-----SYLKKGY-LT-LS-------DSG--DKVAVE---W--- 25 usage_11883.pdb 1 ---GRY-----FMVAAPL-KL-VGTD-------A-APARVLL--FD--- 26 usage_16149.pdb 1 ------YKLNLVATPLFL-KP-------------GIPYPIKVQVKD--- 26 usage_17270.pdb 1 -----G-----TWYSLAM-AA-SDISLLDAQSAP-LRVYVEE------- 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################