################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:10 2021 # Report_file: c_1462_124.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00184.pdb # 2: usage_00539.pdb # 3: usage_01027.pdb # 4: usage_01028.pdb # 5: usage_01079.pdb # 6: usage_01287.pdb # 7: usage_01288.pdb # 8: usage_02366.pdb # # Length: 31 # Identity: 18/ 31 ( 58.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 31 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 31 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00184.pdb 1 -DGSYHEVDSSEMAFKIAGSMAIKEAVQK-- 28 usage_00539.pdb 1 --GSYHEVDSSEMAFKIAGSMAIKEAVQ--- 26 usage_01027.pdb 1 -DGSYHDVDSSEMAFKIAASLALKEAAKKC- 29 usage_01028.pdb 1 --GSYHDVDSSEMAFKIAASLALKEAAKKC- 28 usage_01079.pdb 1 --GSYHEVDSSAMAFKIAGSMAIKEAVQK-- 27 usage_01287.pdb 1 --GSYHDVDSSEMAFKIAASLALKEAAKKC- 28 usage_01288.pdb 1 YDGSYHDVDSSEMAFKIAASLALKEAAKKCD 31 usage_02366.pdb 1 YDGSYKEVDSSEMAFKIAGSMAIKEAVQKG- 30 GSYh VDSSeMAFKIA S A KEA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################