################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:03 2021 # Report_file: c_0892_12.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00058.pdb # 4: usage_00062.pdb # 5: usage_00071.pdb # 6: usage_00081.pdb # 7: usage_00150.pdb # 8: usage_00168.pdb # 9: usage_00173.pdb # # Length: 85 # Identity: 67/ 85 ( 78.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/ 85 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 85 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------------AELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 47 usage_00002.pdb 1 --------LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 52 usage_00058.pdb 1 ---------NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 51 usage_00062.pdb 1 --------LSVAKSELDKAIGRNSNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 52 usage_00071.pdb 1 --------LNAAKCELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 52 usage_00081.pdb 1 -------SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 53 usage_00150.pdb 1 AKSELDKAINAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 60 usage_00168.pdb 1 --------LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 52 usage_00173.pdb 1 --------LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS 52 ELDKAIGRNtNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS usage_00001.pdb 48 LDAVRRAALINMVFQMGETGVAGF- 71 usage_00002.pdb 53 LDAVRRCALINMVFQMGETGVAGF- 76 usage_00058.pdb 52 LDAVRRAALINMVFQMGETGVAG-- 74 usage_00062.pdb 53 LDAVRRSALINMVFQMGETGVAGF- 76 usage_00071.pdb 53 LDAVRRAALINMVFQMGETGVAGF- 76 usage_00081.pdb 54 LDAVRRAALINMVFQMGETGVAGF- 77 usage_00150.pdb 61 LDAVRRAALINMVFQMGETGVAGFT 85 usage_00168.pdb 53 LDAVRRAALINMVFQMGETGVAG-- 75 usage_00173.pdb 53 LDAVRRCALINMVFQMGETGVAG-- 75 LDAVRR ALINMVFQMGETGVAG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################