################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:45 2021 # Report_file: c_0823_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00019.pdb # 3: usage_00022.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00045.pdb # # Length: 68 # Identity: 43/ 68 ( 63.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 68 ( 80.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 68 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 DPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVV 60 usage_00019.pdb 1 -EDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIV 59 usage_00022.pdb 1 DPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVV 60 usage_00030.pdb 1 -PELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVV 59 usage_00031.pdb 1 -PELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVV 59 usage_00045.pdb 1 DPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVV 60 peL E LRKFRFRKET NAAIIMKvDKDrqmVVLe E qniSPeELK ELPERQPRFvV usage_00004.pdb 61 YSYK---- 64 usage_00019.pdb 60 YSYKYQHD 67 usage_00022.pdb 61 YSYKYVH- 67 usage_00030.pdb 60 YSYKYVH- 66 usage_00031.pdb 60 YSYKYVH- 66 usage_00045.pdb 61 YS------ 62 YS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################