################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:08 2021 # Report_file: c_1172_500.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00166.pdb # 2: usage_00167.pdb # 3: usage_00480.pdb # 4: usage_01048.pdb # 5: usage_01088.pdb # 6: usage_01089.pdb # 7: usage_03030.pdb # 8: usage_03031.pdb # 9: usage_03666.pdb # 10: usage_03667.pdb # 11: usage_04777.pdb # 12: usage_04778.pdb # 13: usage_04779.pdb # 14: usage_04780.pdb # 15: usage_04784.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 28 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 28 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 ------VYGKGSWIYDEK--GNA---YL 17 usage_00167.pdb 1 ------VYGKGSWIYDEK--GNA---YL 17 usage_00480.pdb 1 QWHKIKIVRVKQEGILYVDDASSQTI-- 26 usage_01048.pdb 1 ------VYGKGSWIYDEK--GNA---YL 17 usage_01088.pdb 1 ------VRGKGVYLYDEE--GKE---YL 17 usage_01089.pdb 1 ------VRGKGVYLYDEE--GKE---YL 17 usage_03030.pdb 1 ------RSAAGTQLYDDA--GEA---FL 17 usage_03031.pdb 1 ------RSAAGTQLYDDA--GEA---FL 17 usage_03666.pdb 1 ------EKGQGVYLFDDK--AKK---YL 17 usage_03667.pdb 1 ------EKGQGVYLFDDK--AKK---YL 17 usage_04777.pdb 1 ------VRGEGVFLYDDA--GRR---YL 17 usage_04778.pdb 1 ------VRGEGVFLYDDA--GRR---YL 17 usage_04779.pdb 1 ------VRGEGVFLYDDA--GRR---YL 17 usage_04780.pdb 1 ------VRGEGVFLYDDA--GRR---YL 17 usage_04784.pdb 1 ------THAEGIYVHTED--GRR---LI 17 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################