################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:49 2021 # Report_file: c_1115_139.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00207.pdb # 2: usage_00630.pdb # 3: usage_00755.pdb # 4: usage_00850.pdb # 5: usage_00852.pdb # 6: usage_01220.pdb # 7: usage_01582.pdb # 8: usage_01694.pdb # # Length: 99 # Identity: 6/ 99 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 99 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 99 ( 48.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00207.pdb 1 -------------EEELSDLFRMFDKNADGYIDLEELKIMLQATG----ETI----TED- 38 usage_00630.pdb 1 -------------EEELANCFRIFDKNADGFIDIEELGEILRATG----EHV----IEE- 38 usage_00755.pdb 1 --------------EELSDLFRM-DKNADGYIDLDELKIMLQATG----ETI----TED- 36 usage_00850.pdb 1 ------------------ALFKEIDVNGDGAVSYEEVKAFVSKKR----AIK----NEQ- 33 usage_00852.pdb 1 ------------SEEELSECFRIFDKDGNGFIDREEFGDIIRLTG----EQL----TDE- 39 usage_01220.pdb 1 -------------EEELSDLFRMFDKNADGYIDLEELKIMLQATG----ETI----TED- 38 usage_01582.pdb 1 ------------VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEV- 47 usage_01694.pdb 1 FLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLE--------------A 46 F D g eE usage_00207.pdb 39 ------DIEELMKDGDKNNDGRIDYDEFLEFMKGVE--- 68 usage_00630.pdb 39 ------DIEDLMKDSDKNNDGRIDFDEFLKMMEG-V--- 67 usage_00755.pdb 37 ------DIEELMKDGDKNNDGRIDYDEFLEF-------- 61 usage_00850.pdb 34 ------LLQLIFKSIDADGNGEIDQNEFAKF-------- 58 usage_00852.pdb 40 ------DVDEIFGDSDTDKNGRIDFDEFLKMMEN----- 67 usage_01220.pdb 39 ------DIEELMKDGDKNNDGRIDYDEFLEFMKG-V--- 67 usage_01582.pdb 48 ------MVDKAFVQADRKNDGKIDIDEWKDFVSL-N--- 76 usage_01694.pdb 47 WGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAVKLDA 85 D G id dEf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################