################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:28 2021 # Report_file: c_1016_31.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00129.pdb # 2: usage_00152.pdb # 3: usage_00153.pdb # 4: usage_00194.pdb # 5: usage_00256.pdb # 6: usage_00349.pdb # 7: usage_00397.pdb # 8: usage_00481.pdb # 9: usage_00543.pdb # # Length: 64 # Identity: 5/ 64 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 64 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 64 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 ---T-GFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHG 56 usage_00152.pdb 1 -----KYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGV 55 usage_00153.pdb 1 -----KYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGV 55 usage_00194.pdb 1 ---S-KYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGV 56 usage_00256.pdb 1 ---S-RYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGV 56 usage_00349.pdb 1 ---S-RYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGV 56 usage_00397.pdb 1 -----GFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHG 54 usage_00481.pdb 1 KHYGYNSYS-VSNSEKDIMAEIYKNGPVEGAFSV-YSDFLLYKSGVYQHVTGEMMGGHAI 58 usage_00543.pdb 1 -----GHVE-LPQDEAQIAAWLAVNGPVAVAVDA-S-SWMTYTGGVMTS-CVSEQLDHGV 51 E a GP v da sf Y G y usage_00129.pdb 57 VLVV 60 usage_00152.pdb 56 LVV- 58 usage_00153.pdb 56 LVV- 58 usage_00194.pdb 57 LVV- 59 usage_00256.pdb 57 LVV- 59 usage_00349.pdb 57 LVV- 59 usage_00397.pdb 55 VLVV 58 usage_00481.pdb 59 RIL- 61 usage_00543.pdb 52 LLV- 54 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################