################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:36 2021 # Report_file: c_0191_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00068.pdb # 2: usage_00069.pdb # 3: usage_00070.pdb # 4: usage_00071.pdb # 5: usage_00072.pdb # 6: usage_00104.pdb # # Length: 171 # Identity: 134/171 ( 78.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 134/171 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/171 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 AGVLDSSRFRHFIAEKLNVSPRDVQAMVIGAHGDKMVPLTRYVTVNGIPLQEFIKKGRIT 60 usage_00069.pdb 1 ---LDSSRFRYFLAEKLNVSPNDVQAMVIGGHGDTMVPLTRYCTVGGIPLTEFIKQGWIT 57 usage_00070.pdb 1 AGVLDSSRFRYFLAEKLNVSPNDVQAMVIGGHGDTMVPLTRYCTVGGIPLTEFIKQGWIT 60 usage_00071.pdb 1 ---LDSSRFRYFLAEKLNVSPNDVQAMVIGGHGDTMVPLTRYCTVGGIPLTEFIKQGWIT 57 usage_00072.pdb 1 AGVLDSSRFRYFLAEKLNVSPNDVQAMVIGGHGDTMVPLTRYCTVGGIPLTEFIKQGWIT 60 usage_00104.pdb 1 AGVLDSSRFRHFIAEKLNVSPRDVQAMVIGAHGDKMVPLTRYVTVNGIPLQEFIKKGRIT 60 LDSSRFR F AEKLNVSP DVQAMVIG HGD MVPLTRY TV GIPL EFIK G IT usage_00068.pdb 61 QEEIDEIVERTKNAGGEIVNLLGQGSAYFAPAASAIEMAEAYLKDKKRVLVCSCYLEGQY 120 usage_00069.pdb 58 QEEIDEIVERTRNAGGEIVNLLKTGSAYFAPAASAIEMAESYLKDKKRILPCSAYLEGQY 117 usage_00070.pdb 61 QEEIDEIVERTRNAGGEIVNLLKTGSAYFAPAASAIEMAESYLKDKKRILPCSAYLEGQY 120 usage_00071.pdb 58 QEEIDEIVERTRNAGGEIVNLLKTGSAYFAPAASAIEMAESYLKDKKRILPCSAYLEGQY 117 usage_00072.pdb 61 QEEIDEIVERTRNAGGEIVNLLKTGSAYFAPAASAIEMAESYLKDKKRILPCSAYLEGQY 120 usage_00104.pdb 61 QEEIDEIVERTKNAGGEIVNLLGQGSAYFAPAASAIEMAEAYLKDKKRVLVCSCYLEGQY 120 QEEIDEIVERT NAGGEIVNLL GSAYFAPAASAIEMAE YLKDKKR L CS YLEGQY usage_00068.pdb 121 GHKDMFVGVPAVIGGNGVEKVIELELTPEEKELFDKSVEEVRKLQKAIKAL 171 usage_00069.pdb 118 GVKDLFVGVPVIIGKNGVEKIIELELTEEEQEMFDKSVESVRELVETVKKL 168 usage_00070.pdb 121 GVKDLFVGVPVIIGKNGVEKIIELELTEEEQEMFDKSVESVRELVETVKK- 170 usage_00071.pdb 118 GVKDLFVGVPVIIGKNGVEKIIELELTEEEQEMFDKSVESVRELVETVK-- 166 usage_00072.pdb 121 GVKDLFVGVPVIIGKNGVEKIIELELTEEEQEMFDKSVESVRELVETVKK- 170 usage_00104.pdb 121 GHKDMFVGVPAVIGGNGVEKVIELELTPEEKELFDKSVEEVRKLQKAIKAL 171 G KD FVGVP IG NGVEK IELELT EE E FDKSVE VR L K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################