################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:54 2021 # Report_file: c_0715_21.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00097.pdb # 2: usage_00105.pdb # 3: usage_00114.pdb # 4: usage_00122.pdb # 5: usage_00188.pdb # 6: usage_00189.pdb # 7: usage_00190.pdb # 8: usage_00469.pdb # 9: usage_00518.pdb # 10: usage_00564.pdb # 11: usage_00574.pdb # 12: usage_00650.pdb # 13: usage_00652.pdb # # Length: 80 # Identity: 2/ 80 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 80 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 80 ( 41.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 --DPHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 44 usage_00105.pdb 1 --DPHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 44 usage_00114.pdb 1 --DPHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 44 usage_00122.pdb 1 --Q-PKYLEIA------GKRMAYIDEG-------K--GDAIVFQHGNPTSSYLWRNIMPH 42 usage_00188.pdb 1 ---PHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 43 usage_00189.pdb 1 --DPHY-VEVL------GER-HYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 43 usage_00190.pdb 1 --DPHY-VEVL------GER-HYVDVG------PRD-GTPVLFLHGNPTSSYVWRNIIPH 43 usage_00469.pdb 1 ----RF-IEAG------GFRWHVQR-G------SPA-APAILLIHGTGAASHSWRGLAPL 41 usage_00518.pdb 1 --APHY-TEVTDADGTA-LRIHHVDEG------PKD-QRPILLMHGEPSWAYLYRKVIAE 49 usage_00564.pdb 1 --DPHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 44 usage_00574.pdb 1 --DPHY-VEVL------GERMHYVDVG------PRD-GTPVLFLHGNPTSSYLWRNIIPH 44 usage_00650.pdb 1 --PHFK-TNIQ------GLNIHFMRITPKVPKG--VEIVPLLLLHGWPGSVREFYEAIPH 49 usage_00652.pdb 1 ESEAFY-VSTR------FGKTHIIASG------PKD-APSLILLHGGLFSSAMWYPNIAA 46 h g HG usage_00097.pdb 45 VAP-------SHRCIAPD-- 55 usage_00105.pdb 45 VAP-------SHRCIAPD-- 55 usage_00114.pdb 45 VAP-------SHRCIAPD-- 55 usage_00122.pdb 43 LEG-------LGRLVACD-L 54 usage_00188.pdb 44 VAP-------SHRCIAPD-- 54 usage_00189.pdb 44 VAP-------SHRCIAPD-- 54 usage_00190.pdb 44 VAP-------THRCIAPD-- 54 usage_00469.pdb 42 LSR-------HYHVVAPD-- 52 usage_00518.pdb 50 LVA-------KGHRVVAPD- 61 usage_00564.pdb 45 VAP-------SHRCIAPD-- 55 usage_00574.pdb 45 VAP-------SHRCIAPD-- 55 usage_00650.pdb 50 LTAVSKDRNFALEIIAPS-- 67 usage_00652.pdb 47 WSS-------QFRTYAVD-- 57 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################