################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:06:13 2021 # Report_file: c_1217_24.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00035.pdb # 2: usage_00037.pdb # 3: usage_00045.pdb # 4: usage_00058.pdb # 5: usage_00065.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # 9: usage_00069.pdb # 10: usage_00070.pdb # 11: usage_00071.pdb # 12: usage_00232.pdb # 13: usage_00258.pdb # 14: usage_00259.pdb # 15: usage_00260.pdb # 16: usage_00261.pdb # 17: usage_00262.pdb # 18: usage_00263.pdb # 19: usage_00264.pdb # 20: usage_00265.pdb # 21: usage_00266.pdb # 22: usage_00308.pdb # 23: usage_00332.pdb # 24: usage_00357.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 48 ( 14.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 48 ( 60.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -LSFD----K--S---ETP-EGIGF----AIPFQLATKIDKLI----- 28 usage_00037.pdb 1 TLSF--------------P-EGIGF----AIPFQLATKIMDKLIRDG- 28 usage_00045.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRD-- 34 usage_00058.pdb 1 --SFD----K------ETP-EGIGF----AIPFQLATKIMDKLI---- 27 usage_00065.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRD-- 34 usage_00066.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRDG- 35 usage_00067.pdb 1 TLSFD----K--S---ETP-EGIGF----AIPFQLATKIMDKLIRD-- 32 usage_00068.pdb 1 TLSFD-----------ETP-EGIGF----AIPFQLATKIMDKLIRDG- 31 usage_00069.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRD-- 34 usage_00070.pdb 1 TLSFD----K-DG---ETP-EGIGF----AIPFQLATKIMDKLIR--- 32 usage_00071.pdb 1 TLSFD------------TP-EGIGF----AIPFQLATKIMDKLIRD-- 29 usage_00232.pdb 1 -----SAIATL-----SGSIGL-GF----AIPVDQAKRIADELISTG- 32 usage_00258.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRDG- 35 usage_00259.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRDG- 35 usage_00260.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRD-- 34 usage_00261.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRDG- 35 usage_00262.pdb 1 TLSFD----K--S---ETP-EGIGF----AIPFQLATKIMDKLIRD-- 32 usage_00263.pdb 1 TLSFD-----------ETP-EGIGF----AIPFQLATKIMDKLIRDG- 31 usage_00264.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIRD-- 34 usage_00265.pdb 1 TLSFD----K------ETP-EGIGF----AIPFQLATKIMDKLIRD-- 31 usage_00266.pdb 1 TLSFD----K-------TP-EGIGF----AIPFQLATKIMDKLIRD-- 30 usage_00308.pdb 1 -LSFD----K--SNDGETP-EGIGF----AIPFQLATKIMDKLIR--- 33 usage_00332.pdb 1 -ASC-----G-------AT-ACVNTFGDEQLAVDMLADKLLFEALRHS 34 usage_00357.pdb 1 -LSFD----K--SN--ETP-EGIGF----AIPFQLATKIMDKLIRDG- 33 gf aip a i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################