################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:53 2021 # Report_file: c_0740_65.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00137.pdb # 2: usage_00149.pdb # 3: usage_00479.pdb # 4: usage_00480.pdb # 5: usage_00481.pdb # 6: usage_00502.pdb # 7: usage_00523.pdb # 8: usage_00601.pdb # 9: usage_00602.pdb # 10: usage_00719.pdb # 11: usage_00720.pdb # # Length: 66 # Identity: 51/ 66 ( 77.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 66 ( 78.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 66 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00137.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSEV-----Y 55 usage_00149.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSDE----VY 56 usage_00479.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 60 usage_00480.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 60 usage_00481.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 60 usage_00502.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSKKDE--VY 58 usage_00523.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSEV------Y 54 usage_00601.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 60 usage_00602.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 60 usage_00719.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSEKKDEVYL 60 usage_00720.pdb 1 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSEKKDEVYL 60 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSs usage_00137.pdb 56 LNLVLD 61 usage_00149.pdb 57 LNL--- 59 usage_00479.pdb 61 LNLVLD 66 usage_00480.pdb 61 LNL--- 63 usage_00481.pdb 61 LNL--- 63 usage_00502.pdb 59 LNLVLD 64 usage_00523.pdb 55 LNLVLD 60 usage_00601.pdb 61 LNLVLD 66 usage_00602.pdb 61 LNLVLD 66 usage_00719.pdb 61 NL---- 62 usage_00720.pdb 61 NL---- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################