################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:29 2021 # Report_file: c_1484_102.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00094.pdb # 2: usage_00095.pdb # 3: usage_00098.pdb # 4: usage_03080.pdb # 5: usage_03081.pdb # 6: usage_03295.pdb # 7: usage_03296.pdb # 8: usage_03297.pdb # 9: usage_03311.pdb # 10: usage_04749.pdb # 11: usage_04750.pdb # 12: usage_04751.pdb # 13: usage_04752.pdb # # Length: 71 # Identity: 20/ 71 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 71 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 71 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------G-ELLKSSDK 46 usage_00095.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------G-ELLKSSDK 46 usage_00098.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELP-TD-LGELLKSSDK 58 usage_03080.pdb 1 -VESLKGQAVTKQLKEAVDRIKEKVGQRIFDICLQGH---------LPEPE-ELMSPADN 49 usage_03081.pdb 1 -VESLKGQAVTKQLKEAVDRIKEKVGQRIFDICLQGH---------LPEPE-ELMSPADN 49 usage_03295.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 usage_03296.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------G-ELLKSSDK 46 usage_03297.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------G-ELLKSSDK 46 usage_03311.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 usage_04749.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 usage_04750.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 usage_04751.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 usage_04752.pdb 1 TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYP-------------E--LLKSSDK 45 VE LKGQA L V G RIFD L D usage_00094.pdb 47 VMLKRRILALR 57 usage_00095.pdb 47 VMLKRRILALR 57 usage_00098.pdb 59 VMLKRRILALR 69 usage_03080.pdb 50 ILLKRCIMSL- 59 usage_03081.pdb 50 ILLKRCIMSLH 60 usage_03295.pdb 46 VMLKRRILA-- 54 usage_03296.pdb 47 VMLKRRILALR 57 usage_03297.pdb 47 VMLKRRILALR 57 usage_03311.pdb 46 VMLKRRILALR 56 usage_04749.pdb 46 VMLKRRILA-- 54 usage_04750.pdb 46 VMLKRRILA-- 54 usage_04751.pdb 46 VMLKRRILA-- 54 usage_04752.pdb 46 VMLKRRILA-- 54 LKR I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################