################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:22 2021 # Report_file: c_1484_245.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_03101.pdb # 2: usage_03102.pdb # 3: usage_03103.pdb # 4: usage_03104.pdb # 5: usage_03105.pdb # 6: usage_03106.pdb # 7: usage_03107.pdb # 8: usage_03108.pdb # 9: usage_04249.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 39 ( 43.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 39 ( 56.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03101.pdb 1 -SSDVIRLIEQFLKESNLHRTL-------AILQEETN-- 29 usage_03102.pdb 1 ESSDVIRLIEQFLKESNLHRTL-------AILQEETN-- 30 usage_03103.pdb 1 ---DVIRLIEQFLKESNLHRTL-------AILQEETN-- 27 usage_03104.pdb 1 --SDVIRLIEQFLKESNLHRTL-------AILQEETN-- 28 usage_03105.pdb 1 --SDVIRLIEQFLKESNLHRTL-------AILQEETN-- 28 usage_03106.pdb 1 -SSDVIRLIEQFLKESNLHRTL-------AILQEETN-- 29 usage_03107.pdb 1 ---DVIRLIEQFLKESNLHRTL-------AILQEE---- 25 usage_03108.pdb 1 --SDVIRLIEQFLKESNLHRTL-------AILQEETN-- 28 usage_04249.pdb 1 ------FKYIERHVAKY-----VATNFKPNLAIISLENQ 28 rlieqflkesn ailqee #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################