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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:11:38 2021
# Report_file: c_0348_3.html
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#====================================
# Aligned_structures: 5
#   1: usage_00001.pdb
#   2: usage_00004.pdb
#   3: usage_00010.pdb
#   4: usage_00016.pdb
#   5: usage_00017.pdb
#
# Length:        116
# Identity:       26/116 ( 22.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     61/116 ( 52.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            9/116 (  7.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  THILSVHDSARPM-----LEGVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLV   55
usage_00004.pdb         1  TAVLTVDSEEPSFKAGPGVEDLWRLFVPALDKPETDLLSHLDRAVAFIGQARAEGRAVLV   60
usage_00010.pdb         1  THILSVHDSARPM-----LEGVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLV   55
usage_00016.pdb         1  THIISIHESPQPL-----LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLV   55
usage_00017.pdb         1  THIISIHESPQPL-----LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLV   55
                           Thi s h s  p      l    yL iP aD P      Hfke i FIh cRl G  cLV

usage_00001.pdb        56  HSLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK--  109
usage_00004.pdb        61  HSHAGVSRSVAIITAFLMKTDQLPFEKAYEKLQILKPEAKMNEGFEWQLKLYQAMG  116
usage_00010.pdb        56  HCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK--  109
usage_00016.pdb        56  HSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGWA-  110
usage_00017.pdb        56  HSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEF----  107
                           Hs AG SRS t v Ay Mtvt  gw d l    a r  AnpN GF  QL ef    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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