################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:52 2021 # Report_file: c_0670_50.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00135.pdb # 2: usage_00478.pdb # 3: usage_00536.pdb # 4: usage_00538.pdb # 5: usage_00540.pdb # 6: usage_00542.pdb # 7: usage_00545.pdb # 8: usage_00547.pdb # 9: usage_00655.pdb # 10: usage_00678.pdb # 11: usage_00680.pdb # 12: usage_00681.pdb # 13: usage_00688.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 59 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 59 ( 47.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00135.pdb 1 ---TALTV------NPLISGSYDGRI---EWSSSS----HQDHS------NLIVSLDN- 36 usage_00478.pdb 1 ----TSVD--ISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF- 52 usage_00536.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISWH 48 usage_00538.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISWH 48 usage_00540.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00542.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00545.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00547.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00655.pdb 1 GALNEFAF--SPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYF------GGLLCVCW- 50 usage_00678.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00680.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISWH 48 usage_00681.pdb 1 ---TEISW--KADGKIMALGNEDGSIEIFQIPNLKLICTIQQHH------KLVNTISW- 47 usage_00688.pdb 1 --------SDVDKGELAVLASNDNSIALVKLKDLSSKIFKQAHS------FAITEVTIS 45 dg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################