################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:37 2021 # Report_file: c_1418_55.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00185.pdb # 2: usage_00584.pdb # 3: usage_00585.pdb # 4: usage_00605.pdb # 5: usage_00609.pdb # 6: usage_00615.pdb # 7: usage_00616.pdb # 8: usage_00617.pdb # 9: usage_00671.pdb # 10: usage_00691.pdb # 11: usage_00692.pdb # 12: usage_00693.pdb # 13: usage_00694.pdb # 14: usage_00695.pdb # 15: usage_00696.pdb # 16: usage_00697.pdb # 17: usage_00698.pdb # 18: usage_00699.pdb # 19: usage_00700.pdb # 20: usage_00701.pdb # 21: usage_00702.pdb # # Length: 48 # Identity: 4/ 48 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 48 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 48 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00185.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00584.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 47 usage_00585.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 47 usage_00605.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKM-- 45 usage_00609.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKM-- 45 usage_00615.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKM-- 45 usage_00616.pdb 1 VLQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKM-- 45 usage_00617.pdb 1 --QKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKM-- 43 usage_00671.pdb 1 -RETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQ---HLLQKQT 44 usage_00691.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00692.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00693.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00694.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00695.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00696.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00697.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00698.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00699.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00700.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00701.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 usage_00702.pdb 1 -LQKILIGLILGAIVGLILGHY-GYAHAVHTYVKPFGDLFVRLLKMLV 46 qkiligLilgaivgLilghy gyahavhtyvkpfgd rLLkm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################