################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:42 2021 # Report_file: c_0456_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00033.pdb # 4: usage_00068.pdb # 5: usage_00230.pdb # # Length: 100 # Identity: 30/100 ( 30.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/100 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/100 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 PYSVVKFDIAYPKGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELE-NKALGDRYKVD 59 usage_00029.pdb 1 PYSVVKFDIAYPKGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELE-NKALGDRYKVD 59 usage_00033.pdb 1 KFVLVKFDTQYPYGEKQDEFKRLAENSAS-SDDLLVAEVGISDYGDKL-NMELSEKYKLD 58 usage_00068.pdb 1 --VLVKFDTQYPYGEKQDEFKRLAENSAS-SDDLLVAEVGISDYGD-KLNMELSEKYKLD 56 usage_00230.pdb 1 PYSVVKFDIAYPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELE-NKALGDRYKVD 59 VKFD YP GEK F DLL A VG DYG N L YK D usage_00028.pdb 60 DKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 98 usage_00029.pdb 60 DKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSAN- 97 usage_00033.pdb 59 KESYPVFYLFRDGDFENPVPYT--GAVKVGAIQRWLKGQG 96 usage_00068.pdb 57 KESYPVFYLFRDGDFENPVPYS--GAVKVGAIQRWLKGQG 94 usage_00230.pdb 60 DKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSAN- 97 P LF G V V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################