################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:59 2021 # Report_file: c_0127_3.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00014.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00032.pdb # 8: usage_00033.pdb # 9: usage_00035.pdb # 10: usage_00036.pdb # 11: usage_00040.pdb # 12: usage_00042.pdb # 13: usage_00045.pdb # 14: usage_00047.pdb # 15: usage_00056.pdb # 16: usage_00058.pdb # 17: usage_00059.pdb # 18: usage_00060.pdb # 19: usage_00061.pdb # 20: usage_00072.pdb # 21: usage_00073.pdb # 22: usage_00074.pdb # 23: usage_00075.pdb # 24: usage_00098.pdb # 25: usage_00100.pdb # 26: usage_00101.pdb # 27: usage_00109.pdb # # Length: 127 # Identity: 13/127 ( 10.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/127 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/127 ( 26.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 ----ASVSGSPGQSITISCTGTSTDV----NGYNYVSWYQQYAGKAPKLIIFD-----VS 47 usage_00018.pdb 1 -----SVSGSPGQSITISCQG---TSN-DVGGYESVSWYQQHPGKAPKVVIYD-----VS 46 usage_00019.pdb 1 -----SVSGSPGQSITISCQG---TSN-DVGGYESVSWYQQHPGKAPKVVIYD-----VS 46 usage_00020.pdb 1 -----SVSGSPGQSITISCQG---TSN-DVGGYESVSWYQQHPGKAPKVVIYD-----VS 46 usage_00021.pdb 1 -----SVSGSPGQSITISCQG---TSN-DVGGYESVSWYQQHPGKAPKVVIYD-----VS 46 usage_00022.pdb 1 -----SVSGSPGQSVTISCTG---TSR-DVGGYNYVSWYQQHPGKAPKLIIHD-----VI 46 usage_00032.pdb 1 ----PSASGSLGQSVTISCTG---TSS-DVGGYNYVSWYQQHAGKAPKVIIYE-----VN 47 usage_00033.pdb 1 ----PSASGSLGQSVTISCTG---TSS-DVGGYNYVSWYQQHAGKAPKVIIYE-----VN 47 usage_00035.pdb 1 -----SVSASPGQSITVSCTG---SRN-DVGGYDFVSWYQRHPGGVPKLIIYE-----IS 46 usage_00036.pdb 1 ----ASVSGSPGQSITISCTG---TSS-DVGSNNYVSWYQQHPGKAPKLMIYG-----GS 47 usage_00040.pdb 1 ----ASVSASPGQSITISCTG---TSS-DVGAYDWVSWYQQHPGKAPKLLIFD-----VN 47 usage_00042.pdb 1 -----SVSASPGQSITISCSG---TRS-DVGGYDFVSWYQQHPGKVPKLIIYE-----VT 46 usage_00045.pdb 1 ----ASVSGSPGQSITISCTG---TSS-DVGGYNYVSWYQQHPGKAPKLMIYG-----VT 47 usage_00047.pdb 1 ----PSASGSLGQSVTISCTG---TSS-DVGGYNYVSWYQQHAGKAPKVIIYE-----VN 47 usage_00056.pdb 1 ----ASVSGSPGQTITISCNG---TSS-DVGGFDSVSWYQQSPGKAPKVMVFD-----VS 47 usage_00058.pdb 1 ----PSVSKSLGQSVTISCTG---TSS-DIGAYTGVSWYQQHSGTAPRLLIYD-----VS 47 usage_00059.pdb 1 ----PSVSKSLGQSVTISCTG---TSS-DIGAYTGVSWYQQHSGTAPRLLIYD-----VS 47 usage_00060.pdb 1 ----PSVSKSLGQSVTISCTG---TSS-DIGAYTGVSWYQQHSGTAPRLLIYD-----VS 47 usage_00061.pdb 1 ----PSVSKSLGQSVTISCTG---TSS-DIGAYTGVSWYQQHSGTAPRLLIYD-----VS 47 usage_00072.pdb 1 LTQPASVSGSPGQSITISCTG---TSS-DVGGYNYVSWYQQHPGKAPKLMIYD-----VS 51 usage_00073.pdb 1 ----VSVSGSPGQSITISCTG---TSS-NADTYNLVSWYQQRPGKAPKLMIYE-----GT 47 usage_00074.pdb 1 ----VSVSGSPGQSITISCTG---TSS-NADTYNLVSWYQQRPGKAPKLMIYE-----GT 47 usage_00075.pdb 1 ----VSVSGSPGQSITISCTG---TSS-NADTYNLVSWYQQRPGKAPKLMIYE-----GT 47 usage_00098.pdb 1 ----VSVSGSPGQSITISCTG---TSS-NADTYNLVSWYQQRPGKAPKLMIYE-----GT 47 usage_00100.pdb 1 ----ASVSGSPGQSITISCTG---TSS-DVGGYIYVSWYQQHPGKAPKLMIYD-----VS 47 usage_00101.pdb 1 ----ASVSGSPGQSITISCTG---TSS-DVGGYIYVSWYQQHPGKAPKLMIYD-----VS 47 usage_00109.pdb 1 ------GVVQPGRSLRLSCAA---SE-FTFRM-YATHWVRQAPGKGLEWVALISYDGSNK 49 s s Gqs t SC g vsWyqq G p usage_00014.pdb 48 KRPSGVSNRFSGSKSG--DTASLTISGLQAEDEADYHCSSYTSST------PYVLFGG-G 98 usage_00018.pdb 47 KRPSGVSNRFSGSKSG--NTASLTISGLQAEDEGDYYCKSLTSTR------RRVFGTG-T 97 usage_00019.pdb 47 KRPSGVSNRFSGSKSG--NTASLTISGLQAEDEGDYYCKSLTSTR------RRVFGTG-T 97 usage_00020.pdb 47 KRPSGVSNRFSGSKSG--NTASLTISGLQAEDEGDYYCKSLTSTR------RRVFGTG-T 97 usage_00021.pdb 47 KRPSGVSNRFSGSKSG--NTASLTISGLQAEDEGDYYCKSLTSTR------RRVFGTG-T 97 usage_00022.pdb 47 IRPSGVPDRFSGSKSG--NTASLTISGLQAEDEAHYYCWSFAGSY------YVFGTGT-D 97 usage_00032.pdb 48 KRPSGVPDRFSGSKSG--NTASLTVSGLQAEDEADYYCSSYEGSD------NFVFGTG-T 98 usage_00033.pdb 48 KRPSGVPDRFSGSKSG--NTASLTVSGLQAEDEADYYCSSYEGSD------NFVFGTG-T 98 usage_00035.pdb 47 KRPSGIPQRFSGSRSG--NTASLTISGLQDDDEADYYCCSYASYD------RLIFGGG-T 97 usage_00036.pdb 48 NRPSGVSNRFSGSKSG--NTASLTISGLQAEDEADYYCRSWDSNL------SYSVFGG-G 98 usage_00040.pdb 48 NRPSGVSHRFSGSKSG--NTASLTISGLQAEDEADYYCSSYTRRD------TYVFGTG-T 98 usage_00042.pdb 47 KRPSGIPQRFSGSKSG--NTASLTISGLQADDEADYYCCSYANYD------KLILGGG-T 97 usage_00045.pdb 48 NRPSGVSNRFSGSKSG--NTASLTISGLQAGDEADYYCSSYTSTR------TPYVFGTGT 99 usage_00047.pdb 48 KRPSGVPDRFSGSKSG--NTASLTVSGLQAEDEADYYCSSYEGSD------NFVFGTG-T 98 usage_00056.pdb 48 HRPSGISNRFSGSKSG--NTASLTISGLHIEDEGDYFCSSLTDRS------HRIFGGG-T 98 usage_00058.pdb 48 KRPSGVSDRFSGSKSG--NTASLTISGLQTDDEADYYCCSYRTGA------TYIFGTG-T 98 usage_00059.pdb 48 KRPSGVSDRFSGSKSG--NTASLTISGLQTDDEADYYCCSYRTGA------TYIFGTG-T 98 usage_00060.pdb 48 KRPSGVSDRFSGSKSG--NTASLTISGLQTDDEADYYCCSYRTGA------TYIFGTG-T 98 usage_00061.pdb 48 KRPSGVSDRFSGSKSG--NTASLTISGLQTDDEADYYCCSYRTGA------TYIFGTG-T 98 usage_00072.pdb 52 NRPSGVSNRFSGSKSG--NTASLTISGLQAEDEADYYCSSYTSSS------TRVFGTG-T 102 usage_00073.pdb 48 KRPSGVSNRFSASKSA--TAASLTISGLQPEDEADYYCCSYATSR------TLVFGGG-T 98 usage_00074.pdb 48 KRPSGVSNRFSASKSA--TAASLTISGLQPEDEADYYCCSYATSR------TLVFGGG-T 98 usage_00075.pdb 48 KRPSGVSNRFSASKSA--TAASLTISGLQPEDEADYYCCSYATSR------TLVFGGG-T 98 usage_00098.pdb 48 KRPSGVSNRFSASKSA--TAASLTISGLQPEDEADYYCCSYATSR------TLVFGGG-T 98 usage_00100.pdb 48 RRPSGISDRFSGSKSG--NTASLTISGLQAEDEADYYCNSYTTLS------TWLFGGG-T 98 usage_00101.pdb 48 RRPSGISDRFSGSKSG--NTASLTISGLQAEDEADYYCNSYTTLS------TWLFGGG-T 98 usage_00109.pdb 50 YYADSVKGRFTISRDNSMNTVYLQMNTLRPEDTAVYYCARDL-GGYFIRGIMDVWGQG-T 107 rpsg RFs S s asLt sgL De Y C s usage_00014.pdb 99 TKLTV-- 103 usage_00018.pdb 98 KLT---- 100 usage_00019.pdb 98 KLT---- 100 usage_00020.pdb 98 KLT---- 100 usage_00021.pdb 98 KLT---- 100 usage_00022.pdb 98 VTV---- 100 usage_00032.pdb 99 KVTV--- 102 usage_00033.pdb 99 KVTV--- 102 usage_00035.pdb 98 RVS---- 100 usage_00036.pdb 99 TKLTV-- 103 usage_00040.pdb 99 KVTV--- 102 usage_00042.pdb 98 KLTV--- 101 usage_00045.pdb 100 KVEIKRT 106 usage_00047.pdb 99 KVTV--- 102 usage_00056.pdb 99 KVTV--- 102 usage_00058.pdb 99 RVTVLG- 104 usage_00059.pdb 99 RVTVLG- 104 usage_00060.pdb 99 RVTV--- 102 usage_00061.pdb 99 RVTV--- 102 usage_00072.pdb 103 KVTV--- 106 usage_00073.pdb 99 KLTV--- 102 usage_00074.pdb 99 KLTV--- 102 usage_00075.pdb 99 KLTV--- 102 usage_00098.pdb 99 KLTV--- 102 usage_00100.pdb 99 KVTVL-- 103 usage_00101.pdb 99 KVTV--- 102 usage_00109.pdb 108 LVTVS-- 112 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################