################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:46 2021 # Report_file: c_1109_36.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00045.pdb # 3: usage_00046.pdb # 4: usage_00052.pdb # 5: usage_00108.pdb # 6: usage_00272.pdb # 7: usage_00308.pdb # 8: usage_00309.pdb # 9: usage_00348.pdb # # Length: 65 # Identity: 39/ 65 ( 60.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 65 ( 72.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 65 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 50 usage_00045.pdb 1 --NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNSGGAMNIFEM 58 usage_00046.pdb 1 --NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 49 usage_00052.pdb 1 --NSIRYLQQKRWDEAAVNFAKSRWYNQTPNRAKRIITVFRTGTWDAYKNL--------- 49 usage_00108.pdb 1 FTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVIATFRTGTWDAYLTD--------- 51 usage_00272.pdb 1 -TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 50 usage_00308.pdb 1 ---SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 48 usage_00309.pdb 1 --NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 49 usage_00348.pdb 1 --NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL--------- 49 SlRmLQQKRWDEAAVNlAKSRWYNQTPNRAKRvIttFRTGTWDAYkn usage_00001.pdb ----- usage_00045.pdb 59 LRIDE 63 usage_00046.pdb ----- usage_00052.pdb ----- usage_00108.pdb ----- usage_00272.pdb ----- usage_00308.pdb ----- usage_00309.pdb ----- usage_00348.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################