################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:34 2021 # Report_file: c_1461_146.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00288.pdb # 2: usage_00354.pdb # 3: usage_00355.pdb # 4: usage_01076.pdb # 5: usage_01086.pdb # 6: usage_01087.pdb # 7: usage_01090.pdb # 8: usage_01091.pdb # 9: usage_01103.pdb # 10: usage_01104.pdb # 11: usage_01338.pdb # 12: usage_01504.pdb # 13: usage_01827.pdb # 14: usage_02169.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 40 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 40 ( 75.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00288.pdb 1 --KLYIIGAGPGDP-DL---ITVKGLKLLQQ-----A--- 26 usage_00354.pdb 1 HGKLIGVGVGPGDS-EL---LTLRAVNVLRS--------- 27 usage_00355.pdb 1 HGKLIGVGVGPGDS-EL---LTLRAVNVLRS--------- 27 usage_01076.pdb 1 -----------K-----QIGITPQDAEDLKLIAEFLEKY- 23 usage_01086.pdb 1 -GRVYLVGAGPGDP-EL---LTLKAYRLLKE--------- 26 usage_01087.pdb 1 -GRVYLVGAGPGDP-EL---LTLKAYRLLKE--------- 26 usage_01090.pdb 1 -GRVYLVGAGPGDP-EL---LTLKAYRLLKE-----A--- 27 usage_01091.pdb 1 -GRVYLVGAGPGDP-EL---LTLKAYRLLKE--------- 26 usage_01103.pdb 1 RGKVYLVGAGFGGP-EH---LTLKALRVLEV--------- 27 usage_01104.pdb 1 -GKVYLVGAGFGGP-EH---LTLKALRVLEV--------- 26 usage_01338.pdb 1 -RTIYVIGIGTGSP-EF---LTLQAISGLR---------- 25 usage_01504.pdb 1 -GELFLVGMGPGDL-PG---LTQRAREALE---------- 25 usage_01827.pdb 1 --RVAVTGGTHGNEMCG----VYLARYWLQN--------- 25 usage_02169.pdb 1 ----RTAHLGAN-----PWRCDCSLTYLRLW-----L--E 24 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################