################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:30:47 2021 # Report_file: c_0061_1.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00003.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00023.pdb # 6: usage_00026.pdb # 7: usage_00027.pdb # 8: usage_00028.pdb # 9: usage_00029.pdb # 10: usage_00030.pdb # 11: usage_00065.pdb # 12: usage_00074.pdb # 13: usage_00075.pdb # 14: usage_00083.pdb # 15: usage_00096.pdb # 16: usage_00097.pdb # # Length: 209 # Identity: 119/209 ( 56.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 201/209 ( 96.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/209 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 PDMKIKLKMEGNVNGHAFVIEGEGEGKPYDGTNTINLEVKEGAPLPFSYDILTNAFNRAF 60 usage_00005.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00006.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00007.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00023.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00026.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00027.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00028.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00029.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00030.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00065.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00074.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00075.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00083.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00096.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 usage_00097.pdb 1 PDMKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 60 MKInLrMEGNVNGHhFVIdGdGtGKPfeGkqsmdLEVKEGgPLPFafDILTtAFNRvF usage_00003.pdb 61 TKYPDDIPNYFKQSFPEGYSWERTMTFEDKGIVKVKSDISMEEDSFIYEIHLKGENFPPN 120 usage_00005.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00006.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00007.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00023.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 118 usage_00026.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00027.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00028.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00029.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00030.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 118 usage_00065.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00074.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 118 usage_00075.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00083.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 118 usage_00096.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 usage_00097.pdb 61 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEGDTFYNKVRFHGVNFPAN 120 aeYPDhIqdYFKQSFPkGYSWERslTFEDgGIciarnDItMEgDtFynkvrfhGvNFPaN usage_00003.pdb 121 GPVMQKKTLKWEPSTEILYVRDGVLVGDIKHKLLLEGGGHHRVDFKTIYRAKKAVKLPDY 180 usage_00005.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00006.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00007.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00023.pdb 119 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 178 usage_00026.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00027.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00028.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00029.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDIT-ALLLEGNAHYR-DSRTTYKAKEKGVKLPG 178 usage_00030.pdb 119 GPVMQKKTLKWEPSTEKMYVRDGVLTGDIT-ALLLEGNAHYR-DSRTTYKAKEKGVKLPG 176 usage_00065.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDFRTTYKAKEKGVKLPG 180 usage_00074.pdb 119 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITAALLLEGNAHYRCDSRTTYKAKEKGVKLPG 178 usage_00075.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITAALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00083.pdb 119 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 178 usage_00096.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 usage_00097.pdb 121 GPVMQKKTLKWEPSTEKMYVRDGVLTGDITMALLLEGNAHYRCDSRTTYKAKEKGVKLPG 180 GPVMQKKTLKWEPSTEkmYVRDGVLtGDIt aLLLEGnaHyR D rTtYkAKekgvklpg usage_00003.pdb 181 HFVDHRIEILNHDKDYN-KVTVYESAVA- 207 usage_00005.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVAH 209 usage_00006.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00007.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00023.pdb 179 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 206 usage_00026.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00027.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00028.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00029.pdb 179 YHLVDHCIEILSHDKDYNKVKLYEHAVAH 207 usage_00030.pdb 177 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 204 usage_00065.pdb 181 YHFVDHCIEILSHDKDYNKVKLYEHAVAH 209 usage_00074.pdb 179 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 206 usage_00075.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00083.pdb 179 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 206 usage_00096.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 usage_00097.pdb 181 YHLVDHCIEILSHDKDYNKVKLYEHAVA- 208 yh vdhcieilshdkdy KVklYEhAVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################