################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:49 2021 # Report_file: c_1489_114.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00639.pdb # 2: usage_00981.pdb # 3: usage_02479.pdb # 4: usage_02928.pdb # 5: usage_02930.pdb # 6: usage_03897.pdb # 7: usage_04307.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 66 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 66 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00639.pdb 1 --------------TNVNKIKSFIDTK--LKKADKSWKIS-NLTVINGV-PIWALIFYLL 42 usage_00981.pdb 1 TKENLFLEILNIEESKWQEQWKKEQIKA-K-----------TNR-----EKFYLYNELSL 43 usage_02479.pdb 1 SKEAFGCELLKHYISDYQIRLNQLWTT-ET-----------SAR-----DKL-NYLQCWV 42 usage_02928.pdb 1 TKENLFLEILNIQESKWQEQWKKEQIKA-K-----------TNR-----EKFYLYNELSL 43 usage_02930.pdb 1 --ENLFLEILNIEQSKWQEQWKKEQIKA-K-----------TNR-----EKFYLYNELSL 41 usage_03897.pdb 1 SKEAFGVAMLERHYAAYHQRLTELLQ--------------SNYR-----DRILAYYQQTL 41 usage_04307.pdb 1 --------LANQEVLVWLTQLQKEVGK-DV--------------------SDEKLRDYIW 31 usage_00639.pdb 43 RAG--- 45 usage_00981.pdb 44 T----- 44 usage_02479.pdb 43 K----- 43 usage_02928.pdb 44 T----- 44 usage_02930.pdb 42 T----- 42 usage_03897.pdb 42 N---Q- 43 usage_04307.pdb 32 NTLNSG 37 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################