################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:57 2021 # Report_file: c_1260_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00058.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00272.pdb # 5: usage_00273.pdb # 6: usage_01178.pdb # 7: usage_01365.pdb # 8: usage_01366.pdb # 9: usage_01367.pdb # # Length: 36 # Identity: 3/ 36 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 36 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 36 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 DFVLIRQ-HAF-SARNGDYRSLVIGLQYAGIPSIN- 33 usage_00059.pdb 1 -DFVLIRQHAF-SARNGDYRSLVIGLQYAGIPSIN- 33 usage_00060.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSIN- 34 usage_00272.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSVN- 34 usage_00273.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSVN- 34 usage_01178.pdb 1 ILVPSR-F-------EPCGLTQLYGLK-YGTLPLVR 27 usage_01365.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSVN- 34 usage_01366.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSVN- 34 usage_01367.pdb 1 DFVLIRQ-HAFSMARNGDYRSLVIGLQYAGIPSVN- 34 v r ngdyrslviGLq aGips n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################