################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:54 2021 # Report_file: c_0980_34.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00038.pdb # 4: usage_00083.pdb # 5: usage_00348.pdb # 6: usage_00349.pdb # 7: usage_00366.pdb # # Length: 68 # Identity: 2/ 68 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 68 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 68 ( 51.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 KLEIIPAS---QFCPRVEIIATMKK----KGEKRCLN-----PE--S--KAIKNLLKAV- 43 usage_00031.pdb 1 KLEIIPAS---QFCPRVEIIATMKK----KGEKRCLN-----PE--S--KAIKNLLKAV- 43 usage_00038.pdb 1 IVVKTK-C------PVPEVILWFKD----KQMAYWTN-----PY--VTLKGLTQS----- 37 usage_00083.pdb 1 EKASIMYP-SN-NCDKIEVIITLKE----NKGQRCLNPKSKQARLII--KKVER------ 46 usage_00348.pdb 1 KLEIIPAS---LSCPRVEIIATMKK----NDEQRCLN-----PE--S--KTIKNLM---- 40 usage_00349.pdb 1 KLEIIPAS---LSCPRVEIIATMKK----NDEQRCLN-----PE--S--KTIKNLM---- 40 usage_00366.pdb 1 -KKLEMKPKYP-HCEEKMVIITTKSVSRYRGQEHCLH-----PK--L--QSTKRFIKWYN 49 e I t K cln p k usage_00030.pdb -------- usage_00031.pdb -------- usage_00038.pdb -------- usage_00083.pdb -------- usage_00348.pdb -------- usage_00349.pdb -------- usage_00366.pdb 50 AWNEKRRV 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################