################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:53 2021 # Report_file: c_0128_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00014.pdb # # Length: 187 # Identity: 90/187 ( 48.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 98/187 ( 52.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/187 ( 23.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QIVIALDPATTEIFD--GY-----LK---REGR-----SSAEMVDYWVDLVNRYPIISLE 45 usage_00002.pdb 1 QIVIALDPATTEIF------------YHLKEGR-----SSAEMVDYWVDLVNRYPIISLE 43 usage_00003.pdb 1 ----------------------------------GRSLSSAEMVDYWVDLVNRYPIISLE 26 usage_00009.pdb 1 DVFLGFDCASSEFYD--R-KVYDYTK---FEGEGAAVRTSAEQIDYLEELVNKYPIITIE 54 usage_00010.pdb 1 DVFLGFDCASSEFYDKER-KVYDYTK---FEGEGAAVRTSAEQIDYLEELVNKYPIITIE 56 usage_00011.pdb 1 EVFLGFDCASSEFYE--N-GVYDYSK---FEGEHGAKRTAAEQVDYLEQLVDKYPIITIE 54 usage_00014.pdb 1 ---------------------------------GAAVRTSAEQIDYLEELVNKYPIITIE 27 sAE DY LVn YPII E usage_00001.pdb 46 DGLAEDDWEGWALLRAKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLT 105 usage_00002.pdb 44 DGLAEDDWEGWALL-AKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLT 102 usage_00003.pdb 27 DGLAEDDWEGWALLRAKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLT 86 usage_00009.pdb 55 DGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLT 114 usage_00010.pdb 57 DGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLT 116 usage_00011.pdb 55 DGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKVNQIGTLT 114 usage_00014.pdb 28 DGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLT 87 DG E DW GW L lG VQLVGDDf VTN L r I aaNSILIK NQIG LT usage_00001.pdb 106 ETLSAIQLAQR-GWTAVVSHRSGESEDVTIADLVVATNAGQIKTGAPA-TD-IAKYNQLL 162 usage_00002.pdb 103 ETLSAIQLAQRSGWTAVVSHRSG-SEDVTIADLVVATNAGQIKTGAPA-TDRIAKYNQLL 160 usage_00003.pdb 87 ETLSAIQLAQRSGWTAVVSHRSGESEDVTIADLVVATNAGQIKTGAPARTDRIAKYNQLL 146 usage_00009.pdb 115 ETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLL 174 usage_00010.pdb 117 ETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLL 176 usage_00011.pdb 115 ETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQIKTGSLSRTDRIAKYNQLL 174 usage_00014.pdb 88 ETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLL 147 ET AI A G TAVVSHRSG ED TIAD VATNAGQIKTG TD IAKYNQLL usage_00001.pdb 163 RIEEELG 169 usage_00002.pdb 161 RIEEELG 167 usage_00003.pdb 147 RIEEELG 153 usage_00009.pdb 175 RIEDQLG 181 usage_00010.pdb 177 RIEDQLG 183 usage_00011.pdb 175 RIEDELF 181 usage_00014.pdb 148 RIEDQLG 154 RIE Lg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################