################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:53 2021 # Report_file: c_0069_23.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00143.pdb # # Length: 250 # Identity: 98/250 ( 39.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 210/250 ( 84.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/250 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 -VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDF-KGVG----KGSSAADKVVEEIRR 54 usage_00067.pdb 1 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDF-KGVG----KGSSAADKVVEEIRR 55 usage_00143.pdb 1 -VVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG---SAAQSVVDEITA 55 VVlVTGAGGGlGRAyALAFAerGAlVVVNDlG df kGvg SAAdkVVeEIrr usage_00066.pdb 55 RGGKAVANYDSV-E--AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQR 111 usage_00067.pdb 56 RGGKAVANYDSV-E--AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQR 112 usage_00143.pdb 56 AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 115 rGGkAVAnydsV e agekLvkTAldTFGriDVvVNNAGIlRDRsfsriSdEdwDiiqr usage_00066.pdb 112 VHLRGSFQVTRAAWDHK----KQN---YGRI-ITASASGIYGNFGQANYSAAKLGLLGLA 163 usage_00067.pdb 113 VHLRGSFQVTRAAWDHK----KQN---YGRI-ITASASGIYGNFGQANYSAAKLGLLGLA 164 usage_00143.pdb 116 VHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLT 175 VHLrGsFqvtRaAwdhk Kqn yGRI iTaSasGiyGnfGQaNYSAAKlGllgLa usage_00066.pdb 164 NTLVIEGRKNNIHCNTIAPNAGSRTETVPEDLV-------EALKPEYVAPLVLWLCHESC 216 usage_00067.pdb 165 NTLVIEGRKNNIHCNTIAPNAGSRTETVPEDLV-------EALKPEYVAPLVLWLCHESC 217 usage_00143.pdb 176 LVGAAEMGRYGVTVNAIAPS---------ARTRMTETFDA--MAPENVSPLVVWLGSAEA 224 ntlviEgrknnihcNtIAPn edlv lkPEyVaPLVlWLchesc usage_00066.pdb 217 EENGGLFEVG 226 usage_00067.pdb 218 EENGGLFEVG 227 usage_00143.pdb 225 RDVTGKVFE- 233 eengGlfev #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################