################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:10 2021 # Report_file: c_0558_7.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00090.pdb # 2: usage_00148.pdb # 3: usage_00162.pdb # 4: usage_00163.pdb # 5: usage_00164.pdb # 6: usage_00184.pdb # # Length: 140 # Identity: 0/140 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/140 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/140 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 ----TWFD--RPELEVHYQFLE-NDDFSFGLTGGFRNYGYHYVD-E---PG-KDTANMQR 48 usage_00148.pdb 1 DTANMQRW--KIAPDWD---VKLTDD----LRFNGWLSMYKFANDLNTTGY-A--DTRVE 48 usage_00162.pdb 1 ----TWFD--RPELEVHYQFLE-NDDFSFGLTGGFRNYGYHYVD-E---PG-KDTANMQR 48 usage_00163.pdb 1 ----------------F---LE-NDDFSFGLTGGFRNYGYHYVD-E---PG-KDTANMQR 35 usage_00164.pdb 1 ----------------F---LE-NDDFSFGLTGGFRNYGYHYVD-E---PG-KDTANMQR 35 usage_00184.pdb 1 --------LAEPSVYFN---AA-NGP----WRIALAYYQEG-PV-D---YSAGKRGT-WF 38 ndd l y y usage_00090.pdb 49 WKIAPDWDVKLT--DD-LRFNGWLSMYKFA-NDLN-----TTGYADTRVETETGLQYTFN 99 usage_00148.pdb 49 TETGLQYTFN----ETVALRVNYYLERGFNMD-DSR---NNG-E-FSTQEIRAYLPLTLG 98 usage_00162.pdb 49 WKIAPDWDVKLT--DD-LRFNGWLSMYKFA-NDLN-----TTGYADTRVETETGLQYTFN 99 usage_00163.pdb 36 WKIAPDWDVKLT--DD-LRFNGWLSMYKFA-NDLN-----TTGYADTRVETETGLQYTFN 86 usage_00164.pdb 36 WKIAPDWDVKLT--DD-LRFNGWLSMYKFA-NDLN-----TTGYADTRVETETGLQYTFN 86 usage_00184.pdb 39 DRPELEVHYQFLENDD-FSFGLTGGFRNYG-Y-HY-VDEPGKDT-ANMQRWKIAPDWDVK 93 dd f f e l t usage_00090.pdb 100 --ETVALRVNYYLERGFNMD 117 usage_00148.pdb 99 -------NHSVTPCTRIG-- 109 usage_00162.pdb 100 --ETVALRVNYYLERGFNMD 117 usage_00163.pdb 87 --ETVALRVN---------- 94 usage_00164.pdb 87 --ETVALRVN---------- 94 usage_00184.pdb 94 LTDDLRFNGWLSMYKFAND- 112 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################