################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:06:26 2021 # Report_file: c_1380_15.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # 4: usage_00088.pdb # 5: usage_00089.pdb # 6: usage_00090.pdb # 7: usage_00091.pdb # 8: usage_00092.pdb # 9: usage_00157.pdb # 10: usage_00342.pdb # 11: usage_00343.pdb # 12: usage_00344.pdb # 13: usage_00391.pdb # 14: usage_00392.pdb # 15: usage_00393.pdb # 16: usage_00394.pdb # 17: usage_01588.pdb # 18: usage_02158.pdb # # Length: 70 # Identity: 11/ 70 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 70 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 70 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 GPAWREQRRFSVSTLRNLG--L---SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 55 usage_00086.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_00087.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_00088.pdb 1 GPAWREQRRFSVSTLRNLGK----KSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 56 usage_00089.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 usage_00090.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 usage_00091.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 usage_00092.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 usage_00157.pdb 1 GERAKQLRRFSIATLRGFG-VG-KRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTV 58 usage_00342.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_00343.pdb 1 GPAWREQRRFSVSTLRNL------KSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 54 usage_00344.pdb 1 GPAWREQRRFSVSTLRNL------S-LEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 53 usage_00391.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_00392.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 usage_00393.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_00394.pdb 1 GPAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 58 usage_01588.pdb 1 SPLWKNHRRLVHSSFTLFG--EGSNKLQTIVQEAADSLCEELQACRGQSSDLSVVLMRAV 58 usage_02158.pdb 1 -PAWREQRRFSVSTLRNLG--LGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV 57 p w RRfs stlr le v EeA Lc a G p L aV usage_00085.pdb 56 SNVIASLT-- 63 usage_00086.pdb 59 SNVIASLT-- 66 usage_00087.pdb 59 SNVIASLT-- 66 usage_00088.pdb 57 SNVIASLT-- 64 usage_00089.pdb 58 SNVIASLT-- 65 usage_00090.pdb 58 SNVIASLT-- 65 usage_00091.pdb 58 SNVIASLT-- 65 usage_00092.pdb 58 SNVIASLT-- 65 usage_00157.pdb 59 SNVISSIVFG 68 usage_00342.pdb 59 SNVIASLT-- 66 usage_00343.pdb 55 SNVIASLTCG 64 usage_00344.pdb 54 SNVIASLTCG 63 usage_00391.pdb 59 SNVIASLT-- 66 usage_00392.pdb 58 SNVIASLT-- 65 usage_00393.pdb 59 SNVIASLT-- 66 usage_00394.pdb 59 SNVIASLT-- 66 usage_01588.pdb 59 TNVICRLV-- 66 usage_02158.pdb 58 SNVIASLT-- 65 sNVI sl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################