################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:46 2021 # Report_file: c_0646_30.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00022.pdb # 2: usage_00051.pdb # 3: usage_00052.pdb # 4: usage_00115.pdb # 5: usage_00238.pdb # 6: usage_00276.pdb # 7: usage_00289.pdb # 8: usage_00290.pdb # 9: usage_00291.pdb # 10: usage_00292.pdb # 11: usage_00294.pdb # 12: usage_00296.pdb # 13: usage_00303.pdb # 14: usage_00420.pdb # 15: usage_00520.pdb # 16: usage_00521.pdb # # Length: 67 # Identity: 3/ 67 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 67 ( 14.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 67 ( 71.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 --------------------VALYRFA------S-ILVVK-ARVYPFEDDVEVSTGDRVA 32 usage_00051.pdb 1 GTCTGKYGFVIAVTT---IDNIGAGVIQPGRGFVLYPVKYKAIVFR-PF----------- 45 usage_00052.pdb 1 GTCTGKYGFVIAVTT---IDNIGAGVIQPGRGFVLYPVKYKAIVFR-PF----------- 45 usage_00115.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00238.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-P------------ 46 usage_00276.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00289.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00290.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00291.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00292.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00294.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00296.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00303.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-P------------ 46 usage_00420.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00520.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 usage_00521.pdb 1 GSCTGKFGYILCVLDYDNI-DIQRGRILPTDGSAEFNVKYRAVVFK-PF----------- 47 i g i Vky A Vf p usage_00022.pdb 33 PGDVLA- 38 usage_00051.pdb ------- usage_00052.pdb ------- usage_00115.pdb 48 ------K 48 usage_00238.pdb ------- usage_00276.pdb 48 ------K 48 usage_00289.pdb ------- usage_00290.pdb 48 ------K 48 usage_00291.pdb ------- usage_00292.pdb 48 ------K 48 usage_00294.pdb 48 ------K 48 usage_00296.pdb 48 ------K 48 usage_00303.pdb ------- usage_00420.pdb ------- usage_00520.pdb ------- usage_00521.pdb ------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################