################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:46 2021 # Report_file: c_0019_14.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00014.pdb # 2: usage_00028.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00039.pdb # 9: usage_00052.pdb # 10: usage_00053.pdb # 11: usage_00054.pdb # 12: usage_00056.pdb # 13: usage_00057.pdb # 14: usage_00058.pdb # 15: usage_00063.pdb # 16: usage_00064.pdb # 17: usage_00126.pdb # 18: usage_00130.pdb # 19: usage_00133.pdb # 20: usage_00134.pdb # 21: usage_00135.pdb # 22: usage_00136.pdb # 23: usage_00137.pdb # # Length: 177 # Identity: 32/177 ( 18.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/177 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/177 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00028.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00030.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00031.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00032.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00033.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00034.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00039.pdb 1 NLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSL 60 usage_00052.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00053.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00054.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00056.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00057.pdb 1 NLQFRDSVVIYPVWDGFDLGADT-------RPGDYPITQYPLHQLPLNHLIDNLLVRGAL 53 usage_00058.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00063.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00064.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00126.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00130.pdb 1 RLVFDNITTIQCYYDGIDVNADT-G-SPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCM 58 usage_00133.pdb 1 NLQFRDSVVIYPVADGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00134.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00135.pdb 1 NLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 60 usage_00136.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 usage_00137.pdb 1 NLQFRDSVVIYPVWDGFDLGADT------DRPGDYPITQYPLHQLPLNHLIDNLLVRGAL 54 nLqFrdsv i pv DGfDlgaDt RpgDyp YP hQLP nHlidN lvr l usage_00014.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00028.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00030.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00031.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00032.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00033.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00034.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00039.pdb 61 GVGLGMDGSGGYVSNVTVQDCAGAGMLAHTYNRVFSNITVIDCNYLNFDSDQIIIIGDCI 120 usage_00052.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00053.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00054.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00056.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00057.pdb 54 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 113 usage_00058.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00063.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00064.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00126.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00130.pdb 59 GIGAWWDGQKNIIDNVVTYEAHKEGMFDRGTNNDITNITVVCANKDLTNLNQIVCEGGSR 118 usage_00133.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00134.pdb 61 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00135.pdb 61 GVGFGMDGKGMYASNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 120 usage_00136.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 usage_00137.pdb 55 GVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACR 114 GvG gmDG g y sN tv dcag G t vftNI id N f nQI i G cr usage_00014.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 usage_00028.pdb 121 VNGLRLIGIRS--GQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 163 usage_00030.pdb 115 VNGLRLIGIR------LTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 153 usage_00031.pdb 115 VNGLRLIGIR------LTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 153 usage_00032.pdb 115 VNGLRLIGIR------LTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 153 usage_00033.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLA------------ 153 usage_00034.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 usage_00039.pdb 121 VNGIRAAGIKPQPSNGLVISAPNSTISGLVGNVPPDKIL-VGNLLDP-VLGQSRVIG 175 usage_00052.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00053.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00054.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00056.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 usage_00057.pdb 114 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 153 usage_00058.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 usage_00063.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00064.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00126.pdb 121 VNGLRLIGIRSTDGQGLTIDAPNSTVSGITGMVDPSRIN-VANLA------------ 164 usage_00130.pdb 119 LRGIMVHAY---TTQGYAVYAPSSEVSNVSC-AGSGTKKI------LC--------- 156 usage_00133.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 usage_00134.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00135.pdb 121 VNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 165 usage_00136.pdb 115 VNGLRLIGIRS----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 155 usage_00137.pdb 115 VNGLRLIGIR-----SLTIDAPNSTVSGITGMVDPSRIN-VANLAE----------- 154 vnG r gi l i APnStvSg g v p i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################