################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1473_126.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00356.pdb # 2: usage_00365.pdb # 3: usage_00600.pdb # 4: usage_01310.pdb # 5: usage_01311.pdb # 6: usage_01312.pdb # 7: usage_01313.pdb # 8: usage_01452.pdb # 9: usage_01453.pdb # 10: usage_02491.pdb # 11: usage_02790.pdb # 12: usage_02914.pdb # # Length: 26 # Identity: 0/ 26 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 26 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 26 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00356.pdb 1 ------IRARVDSFTNAFPA-ILEI- 18 usage_00365.pdb 1 ----IPTIKKALEGIP---VVT-L-D 17 usage_00600.pdb 1 ----SPEALQALIDGK---LSVLEA- 18 usage_01310.pdb 1 ----IPDVIQAFKNGE---FVVVLDD 19 usage_01311.pdb 1 ----IPDVIQAFKNGE---FVVVLDD 19 usage_01312.pdb 1 ----IPDVIQAFKNGE---FVVVLDD 19 usage_01313.pdb 1 ----IPDVIQAFKNGE---FVVVLDD 19 usage_01452.pdb 1 ---TEDMVERLK---P---GTVVV-D 16 usage_01453.pdb 1 PPQITWDKANLN--GK---VTVND-- 19 usage_02491.pdb 1 ----SPEVQDALKNKK---PVVALE- 18 usage_02790.pdb 1 ----IPDVIQAFKNGE---FVVVLDD 19 usage_02914.pdb 1 ----CPYSNATRGNID---VVLILID 19 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################