################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:52 2021 # Report_file: c_1191_31.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00027.pdb # 2: usage_00359.pdb # 3: usage_00390.pdb # 4: usage_00479.pdb # 5: usage_00480.pdb # 6: usage_00805.pdb # 7: usage_01803.pdb # 8: usage_01820.pdb # 9: usage_01860.pdb # 10: usage_02071.pdb # 11: usage_02136.pdb # 12: usage_02137.pdb # 13: usage_02139.pdb # 14: usage_02227.pdb # 15: usage_02550.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 79 ( 1.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/ 79 ( 82.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -----YSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 28 usage_00359.pdb 1 ------------------RAISIQALKDKDWG------------KGLSIGVLASGSIAAP 30 usage_00390.pdb 1 ----LYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 29 usage_00479.pdb 1 ----LYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 29 usage_00480.pdb 1 ----LYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 29 usage_00805.pdb 1 D----GKLIKTFTSLLTDTNGFILRSD----A-----------QKTIYVTF--------- 32 usage_01803.pdb 1 ----SFT------GSKTGIGGYVATDP----T-----------RKEIVVSF--------- 26 usage_01820.pdb 1 ---------------------WAYVVE----DPETHKITDFFS-FYNLEST--------- 25 usage_01860.pdb 1 DATFLYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 33 usage_02071.pdb 1 -----YSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 28 usage_02136.pdb 1 -----YSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 28 usage_02137.pdb 1 DATFLYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 33 usage_02139.pdb 1 DATFLYSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 33 usage_02227.pdb 1 -----YSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 28 usage_02550.pdb 1 -----YSFED---SGVGDVTGFLALDN----T-----------NKLIVLSF--------- 28 k usage_00027.pdb 29 ------RGS---------- 31 usage_00359.pdb 31 LRKHDG------------- 36 usage_00390.pdb 30 ------R------------ 30 usage_00479.pdb 30 ------R------------ 30 usage_00480.pdb 30 ------R------------ 30 usage_00805.pdb 33 ------RGT---------- 35 usage_01803.pdb 27 ------RGS---------- 29 usage_01820.pdb 26 ------VIQNPKHDNVRAA 38 usage_01860.pdb 34 ------RGS---------- 36 usage_02071.pdb 29 ------RGS---------- 31 usage_02136.pdb 29 ------RGS---------- 31 usage_02137.pdb 34 ------RGS---------- 36 usage_02139.pdb 34 ------RGS---------- 36 usage_02227.pdb 29 ------RGS---------- 31 usage_02550.pdb 29 ------RGS---------- 31 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################