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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 22:59:19 2021
# Report_file: c_1401_44.html
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#====================================
# Aligned_structures: 3
#   1: usage_00619.pdb
#   2: usage_00705.pdb
#   3: usage_00706.pdb
#
# Length:         86
# Identity:       20/ 86 ( 23.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     70/ 86 ( 81.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/ 86 ( 18.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00619.pdb         1  --CRRVALMITAVWVLAFAVSCPLLFG-FNT---------TGDPTV-CSISNPDFVIYSS   47
usage_00705.pdb         1  TRA-RAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASS   59
usage_00706.pdb         1  TRA-RAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASS   59
                             a RakviIctVWaisalVSflpimm wwr         yqDPgc dfvtNrayaIaSS

usage_00619.pdb        48  VVSFYLPFGVTVLVYARIYVVLKQR-   72
usage_00705.pdb        60  IISFYIPLLIMIFVALRVYREAKE--   83
usage_00706.pdb        60  IISFYIPLLIMIFVALRVYREAKEQI   85
                           iiSFYiPllimifValRvYreaKe  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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