################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:39 2021 # Report_file: c_1434_61.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01098.pdb # 2: usage_01099.pdb # 3: usage_01100.pdb # 4: usage_01101.pdb # 5: usage_01102.pdb # 6: usage_01103.pdb # 7: usage_01104.pdb # # Length: 123 # Identity: 72/123 ( 58.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/123 ( 67.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/123 ( 32.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01098.pdb 1 LEDLQEELKKDVF--STKLQYEAANNV--LYSKWLNKHSSIKKELRIEAQKKVALKARLD 56 usage_01099.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNV-MLYSKWLNKHSSIKKEM------LRIEAQKKV 53 usage_01100.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNV-MLYSKWLNKHSSIKKEM------LRIEAQKKV 53 usage_01101.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNV-MLYSKWLNKHSSIKKEM------LRIEAQKKV 53 usage_01102.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNV-MLYSKWLNKHSSIKKEM------LRIEAQKK- 52 usage_01103.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNVM-LYSKWLNKHSSIKKEM------LRIEAQK-K 52 usage_01104.pdb 1 LEDLQEELKKDVFIDSTKLQYEAANNV-MLYSKWLNKHSSIKKEM------LRIEAQKKV 53 LEDLQEELKKDVF STKLQYEAANNV LYSKWLNKHSSIKKEm lrieaqk usage_01098.pdb 57 Y-------YS-----ADKDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDRAF- 103 usage_01099.pdb 54 ALKARLDYYSGRGDG--KDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 111 usage_01100.pdb 54 ALKA-R-----------------DTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 95 usage_01101.pdb 54 A---------------------VDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 92 usage_01102.pdb 53 --------------------LKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 92 usage_01103.pdb 53 -----------------------DTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 89 usage_01104.pdb 54 A-----------------------TSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAF 90 TSLQYWGILLDFCSGALDAIKSRGFAIKHIQDmra usage_01098.pdb --- usage_01099.pdb 112 EA- 113 usage_01100.pdb --- usage_01101.pdb --- usage_01102.pdb --- usage_01103.pdb 90 EA- 91 usage_01104.pdb 91 EAG 93 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################