################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:03 2021 # Report_file: c_0608_8.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00052.pdb # 2: usage_00434.pdb # 3: usage_00435.pdb # 4: usage_00477.pdb # 5: usage_00478.pdb # 6: usage_00479.pdb # 7: usage_00480.pdb # 8: usage_00481.pdb # 9: usage_00482.pdb # 10: usage_00483.pdb # 11: usage_00484.pdb # # Length: 87 # Identity: 32/ 87 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 87 ( 79.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 87 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -PEEARTAVAQNLKAGVNAIKIAATGGV---TDAQEIQSVE--------QRAICDEAHQY 48 usage_00434.pdb 1 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 55 usage_00435.pdb 1 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 55 usage_00477.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00478.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00479.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00480.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00481.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00482.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00483.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 usage_00484.pdb 1 SPWEARKMVRKNRKYGADLI-FCATGGVMSRNTDVN-----AKQFTLEEMKAIVDEAHNH 54 PwEARkmVrkNrKyGadlI fcATGGV ntdvn mkAIvDEAHnh usage_00052.pdb 49 GVIVGAHAQSPEGVRRSLLAGVDTIEH 75 usage_00434.pdb 56 GMKVAAHAHGLIGIKAAIKAGVDSVEH 82 usage_00435.pdb 56 GMKVAAHAHGLIGIKAAIKAGVDSVEH 82 usage_00477.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00478.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00479.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00480.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00481.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00482.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00483.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 usage_00484.pdb 55 GMKVAAHAHGLIGIKAAIKAGVDSVEH 81 GmkVaAHAhgliGikaaikAGVDsvEH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################