################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:19 2021 # Report_file: c_1423_51.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00029.pdb # 2: usage_00959.pdb # 3: usage_00960.pdb # 4: usage_00961.pdb # 5: usage_00962.pdb # 6: usage_00963.pdb # # Length: 72 # Identity: 5/ 72 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 72 ( 43.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 72 ( 56.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 --DYENVALLGSNLGIG-----KLNEVSVLNRIADEMGMDTISLGVSIAHVMEAV----- 48 usage_00959.pdb 1 ---------------------PFHILAQVLSKIAYKSGK-SGAFLDAFHQILSEGENAQA 38 usage_00960.pdb 1 SA-KDLALLLFT--HLPGNNTPFHILAQVLSKIAYKSGK-SGAFLDAFHQILSEG----- 51 usage_00961.pdb 1 ---KDLALLLFT--HLPGNNTPFHILAQVLSKIAYKSGK-SGAFLDAFHQILSEG----- 49 usage_00962.pdb 1 SA-KDLALLLFT--HLPGNNTPFHILAQVLSKIAYKSGK-SGAFLDAFHQILSE------ 50 usage_00963.pdb 1 ---KDLALLLFT--HLPGNNTPFHILAQVLSKIAYKSGK-SGAFLDAFHQILSEG----- 49 fhilaqVLskIAyksGk sgafldafhqilse usage_00029.pdb 49 ---------ERG 51 usage_00959.pdb 39 ALTRLSRTF--- 47 usage_00960.pdb ------------ usage_00961.pdb ------------ usage_00962.pdb ------------ usage_00963.pdb ------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################