################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:12 2021 # Report_file: c_0464_45.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00320.pdb # 2: usage_00351.pdb # 3: usage_00352.pdb # 4: usage_00671.pdb # 5: usage_00672.pdb # 6: usage_01113.pdb # # Length: 102 # Identity: 30/102 ( 29.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/102 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/102 ( 22.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00320.pdb 1 NVKVVSNFMDFDETGVLKGFKGELIHVFNKHDGALRN---TEYFNQLKDNSNIILLGDSQ 57 usage_00351.pdb 1 NVKVVSNF-DFDENGVLKGFKGELIHVFNKHDGALKN---TDYFSQLKDNSNIILLGDSQ 56 usage_00352.pdb 1 NVKVVSNF-DFDENGVLKGFKGELIHVFNKHDGALKN---TDYFSQLKDNSNIILLGDSQ 56 usage_00671.pdb 1 ---------------LLDGFQQPMIHTFNKNE--TVLNETSEYYDLVHTRDHIIVMGDSI 43 usage_00672.pdb 1 NVKVVSNFLQF-RDGLLDGFQQPMIHTFNKNE--TVLNETSEYYDLVHTRDHIIVMGDSI 57 usage_01113.pdb 1 NVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN---TDYFSQLKDNSNIILLGDSQ 57 L GF IH FNK Y II GDS usage_00320.pdb 58 GDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV- 98 usage_00351.pdb 57 GDLR-ADGVANVEHILKIGYLNDRVDELLEKYDSYDIVL-VK 96 usage_00352.pdb 57 GDLR-ADGVANVEHILKIGYLNDRVDELLEKYDSYDIVL-V- 95 usage_00671.pdb 44 GDADMASGVPASSHIMKIGFLFDHVEANMKKYMDTFDIVLVD 85 usage_00672.pdb 58 GDADMASGVPASSHIMKIGFLFDHVEANMKKYMDTFDIVLVD 99 usage_01113.pdb 58 GDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVK 99 GD A GV HI KIG L D V KY V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################