################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:14:56 2021 # Report_file: c_0088_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00012.pdb # 10: usage_00013.pdb # # Length: 169 # Identity: 80/169 ( 47.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/169 ( 49.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/169 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -SVSVRNVPAYRYRRQVSVEVPGIGRVSGDIAWGGNWFFLVAGHGQRLAGDNLDALTAYT 59 usage_00002.pdb 1 -SVSVRNVPAYRYRTQVMLQLPGHGKVHGDIAWGGNWFFLISDHGQRIALDNVEALTHYT 59 usage_00003.pdb 1 -SVSVRNVPAYRYRTQVMLQLPGHGKVHGDIAWGGNWFFLISDHGQRIALDNVEALTHYT 59 usage_00004.pdb 1 -SVSVRNVPAYRYRTQVMLQLPGHGKVHGDIAWGGNWFFLISDHGQRIALDNVEALTHYT 59 usage_00005.pdb 1 -SVSVRNVPAYRYRTQVMLQLPGHGKVHGDIAWGGNWFFLISDHGQRIALDNVEALTHYT 59 usage_00006.pdb 1 GAITVANVPSYRYRQHVAVNVPGHGVVHGDIAWGGNWFFLVAEHGQRIELDNREVLTEYT 60 usage_00007.pdb 1 GAITVANVPSYRYRQHVAVNVPGHGVVHGDIAWGGNWFFLVAEHGQRIELDNREVLTEYT 60 usage_00008.pdb 1 -AITVANVPSYRYRQHVAVNVPGHGVVHGDIAWGGNWFFLVAEHGQRIELDNREVLTEYT 59 usage_00012.pdb 1 LSVSVRNVLAYRHAKDVALDVPGYGPVRGDIAWGGNWFFLISDHGQRVAGDNVAALTAYA 60 usage_00013.pdb 1 LSVSVRNVLAYRHAKDVALDVPGYGPVRGDIAWGGNWFFLISDHGQRVAGDNVAALTAYA 60 V NV YR V PG G V GDIAWGGNWFFL HGQR DN LT Y usage_00001.pdb 60 VAVQQALDDQDIRGEDGGAIDHIELFADDPHADSRNFVLCPGK-AYDRSPCGTGTSAKLA 118 usage_00002.pdb 60 RDVRQALEAAGITGAEGGVIDHIELFADDPQADSRNFVLCPGK-AYDRSPCGTGTSAKLA 118 usage_00003.pdb 60 RDVRQALEAAGITGAEGGVIDHIELFADDPQADSRNFVLCPGK-AYDRSPCGTGTSAKLA 118 usage_00004.pdb 60 RDVRQALEAAGITGAEGGVIDHIELFADDPQADSRNFVLCPGK-AYDRSPCGTGTSAKLA 118 usage_00005.pdb 60 RDVRQALEAAGITGAEGGVIDHIELFADDPQADSRNFVLCPGK-AYDRSPCGTGTSAKLA 118 usage_00006.pdb 61 WAMLKALEAQGITGENGAPIDHVELFADDPNADSRNFVMCPGK-AYDRSPCGTGTSAKLA 119 usage_00007.pdb 61 WAMLKALEAQGITGENGAPIDHVELFADDPNADSRNFVMCPGK-AYDRSPCGTGTSAKLA 119 usage_00008.pdb 60 WAMLKALEAQGITGENGAPIDHVELFADDPNADSRNFVMCPGK-AYDRSPCGTGTSAKLA 118 usage_00012.pdb 61 SAVREGLERAGITGANGGEIDHIELFADDPEHDSRSFVLCPGLRSPC----GTGTSAKLA 116 usage_00013.pdb 61 SAVREGLERAGITGANGGEIDHIELFADDPEHDSRSFVLCPGR-SPC----GTGTSAKLA 115 Le gItG G IDH ELFADDP DSR FV CPG GTGTSAKLA usage_00001.pdb 119 CLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQPGGPIVPTIRGRAHV 167 usage_00002.pdb 119 CLAADGKLAPGQAWRQASVIGSQFSAHYEKVG----EQLIPILRGSAHI 163 usage_00003.pdb 119 CLAADGKLAPGQAWRQASVIGSQFSAHYEKVG----EQLIPILRGSAHI 163 usage_00004.pdb 119 CLAADGKLAPGQAWRQASVIGSQFSAHYEKVG----EQLIPILRGSAHI 163 usage_00005.pdb 119 CLAADGKLAPGQAWRQASVIGSQFSAHYEKVG----EQLIPILRGSAHI 163 usage_00006.pdb 120 CLAADGTLAEGQTWVQASITGSQFHGRYERDG----ERIRPFITG---- 160 usage_00007.pdb 120 CLAADGTLAEGQTWVQASITGSQFHGRYERDG----ERIRPFITG---- 160 usage_00008.pdb 119 CLAADGTLAEGQTWVQASITGSQFHGRYERDG----ERIRPFITG---- 159 usage_00012.pdb 117 CLAADGKLAPGAVWRQASVIGSVFHASYVQAE----GGIVPTIRGSAHL 161 usage_00013.pdb 116 CLAADGKLAPGAVWRQASVIGSVFHASYVQAE----GGIVPTIRGSAHL 160 CLAADG La G W QAS GS F Y P G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################