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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:10:39 2021
# Report_file: c_1081_46.html
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#====================================
# Aligned_structures: 9
#   1: usage_00028.pdb
#   2: usage_00039.pdb
#   3: usage_00175.pdb
#   4: usage_00177.pdb
#   5: usage_00398.pdb
#   6: usage_00438.pdb
#   7: usage_00674.pdb
#   8: usage_00676.pdb
#   9: usage_00816.pdb
#
# Length:         73
# Identity:        6/ 73 (  8.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     23/ 73 ( 31.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           24/ 73 ( 32.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00028.pdb         1  --TEIRRAIQILSRR------TKNNPILLG----DPGVGKTAIVEGLAIKIVQGDVPDS-   47
usage_00039.pdb         1  RDEEIRRVIQILLRR------TKNNPVLIG----EPGVGKTAIVEGLAQRIVKGDVPEG-   49
usage_00175.pdb         1  RDEEIRRVIQILLRR------TKNNPVLIG----EPGVGKTAIVEGLAQRIVKGDVPEG-   49
usage_00177.pdb         1  -DEEIRRVIQILLRR------TKNNPVLIG----EPGVGKTAIVEGLAQRIVKGDVPEG-   48
usage_00398.pdb         1  RRGEAEALARIYLNRLLSGAGLS-DVNMIYGSIGRVGIGKTTLAKFTVKRVSEA-----A   54
usage_00438.pdb         1  -EKELERAIQVLCRR------RKNNPLLVG----ESGVGKTAIAEGLAWRIVQGDVPEV-   48
usage_00674.pdb         1  RSKEIQRVIEVLSRR------TKNNPVLIG----EPGVGKTAIAEGLAQQIINNEVPEI-   49
usage_00676.pdb         1  RSKEIQRVIEVLSRR------TKNNPVLIG----EPGVGKTAIAEGLAQQIINNEVPEI-   49
usage_00816.pdb         1  RDEEIRRTIQVLQRR------TKNNPVLIG----EPGVGKTAIVEGLAQRIINGEVPEG-   49
                              E  r i  l rR       k np l g      GvGKTai egla  i         

usage_00028.pdb        48  L---KGRKLVS--   55
usage_00039.pdb        50  L---KGKRIVS--   57
usage_00175.pdb        50  L---KGKRIVS--   57
usage_00177.pdb        49  L---KGKRIVS--   56
usage_00398.pdb        55  AKEGLTVKQAYVN   67
usage_00438.pdb        49  M---ADCTIYS--   56
usage_00674.pdb        50  L---RDKRVMTL-   58
usage_00676.pdb        50  L---RDKRVMTL-   58
usage_00816.pdb        50  L---KGRRVLA--   57
                                        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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