################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:25 2021 # Report_file: c_1420_122.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00077.pdb # 2: usage_00107.pdb # 3: usage_00172.pdb # 4: usage_00354.pdb # 5: usage_00381.pdb # 6: usage_00921.pdb # 7: usage_01037.pdb # 8: usage_01038.pdb # 9: usage_01332.pdb # 10: usage_01391.pdb # # Length: 20 # Identity: 2/ 20 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 20 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 20 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 DPWEQHAKWYPGCKYLLEQ- 19 usage_00107.pdb 1 DPWTEHAKWFPSCQFLLRSK 20 usage_00172.pdb 1 DPWTEHAKWFPSCQFLLRSK 20 usage_00354.pdb 1 -PIEEHKKHSSGCAFLSV-- 17 usage_00381.pdb 1 RAWSEHRRHFPNCFFVLGR- 19 usage_00921.pdb 1 SPTEKHKKLYPSCRFVQSL- 19 usage_01037.pdb 1 DPWEQHAKWYPGCKYLLEQK 20 usage_01038.pdb 1 DPWEQHAKWYPGCKYLLEQ- 19 usage_01332.pdb 1 DPWTEHAKWFPGCQFLLRSK 20 usage_01391.pdb 1 DPWTEHAKWFPGCQFLLRSK 20 p H k p C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################