################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:00 2021 # Report_file: c_1383_108.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_01275.pdb # 4: usage_01357.pdb # 5: usage_01359.pdb # # Length: 75 # Identity: 4/ 75 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 75 ( 52.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 75 ( 48.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ---YRQSLEIISRYLREQATGAADTAPMGASGATSRKALETLRRVGDGVQRNHE----TA 53 usage_00024.pdb 1 --LYRQSLEIISRYLREQATGAADTAPMGASGATSRKALETLRRVGDGVQRNHE----TA 54 usage_01275.pdb 1 -ELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHE----TA 55 usage_01357.pdb 1 -L-YFQSME---------------------NRELTYITNSIAEAQRVMAAMLADERLLAT 37 usage_01359.pdb 1 DELYRQSLEIISRYLREQATGAKDT------GATSRKALETLRRVGDGVQRNHE----TA 50 YrQSlE gatsrkaletlrrvgdgvqrnhe ta usage_00023.pdb 54 FQGMLRKL------- 61 usage_00024.pdb 55 FQGMLRKL------- 62 usage_01275.pdb 56 FQGMLRKL------- 63 usage_01357.pdb 38 VRKVADACIASIAQG 52 usage_01359.pdb 51 FQGMLRKLD------ 59 fqgmlrkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################