################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:42 2021 # Report_file: c_0109_9.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00023.pdb # 5: usage_00024.pdb # 6: usage_00044.pdb # 7: usage_00045.pdb # 8: usage_00138.pdb # 9: usage_00139.pdb # # Length: 218 # Identity: 80/218 ( 36.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/218 ( 36.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/218 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYAT- 59 usage_00020.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYAT- 59 usage_00021.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYATD 60 usage_00023.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYATD 60 usage_00024.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYATD 60 usage_00044.pdb 1 EEARLPRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASE 60 usage_00045.pdb 1 -EARLPRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASE 59 usage_00138.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYATD 60 usage_00139.pdb 1 PSEDQEQLLTWYKAFFSILTPQDERLRVIDEMHGYFTEMVRRKTAEPGDDLTSALIYAD- 59 L FFS TP E E T V K A PGDDLTSALI A usage_00019.pdb 60 --ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 117 usage_00020.pdb 60 G-ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 118 usage_00021.pdb 61 G-ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 119 usage_00023.pdb 61 G-ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 119 usage_00024.pdb 61 G-ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 119 usage_00044.pdb 61 N-GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEE 119 usage_00045.pdb 60 N-GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEE 118 usage_00138.pdb 61 GE-TPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 119 usage_00139.pdb 60 G-ETPLTEEEVIGNLQALVAAGHETTVSLILTAVRALLSHPEQLRLVRDGEIGWETAIEE 118 LT E LQ VAAGHETT SLI AV L HPEQ LV GE W EE usage_00019.pdb 118 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 175 usage_00020.pdb 119 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 176 usage_00021.pdb 120 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 177 usage_00023.pdb 120 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITRAT 179 usage_00024.pdb 120 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 177 usage_00044.pdb 120 TLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS 179 usage_00045.pdb 119 TLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADR------- 171 usage_00138.pdb 120 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 177 usage_00139.pdb 119 TLRWDGPVIHLLMRFATEDIDLGDAVIPRGEGVVMSYRAIGRDITVHGADADDFDITR-- 176 TLR P H L RFA ED GD VIP G SY A GRD HG AD usage_00019.pdb -------------------------------------- usage_00020.pdb -------------------------------------- usage_00021.pdb -------------------------------------- usage_00023.pdb 180 AAR----------------------------------- 182 usage_00024.pdb -------------------------------------- usage_00044.pdb 180 ---GNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 214 usage_00045.pdb -------------------------------------- usage_00138.pdb -------------------------------------- usage_00139.pdb -------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################