################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:21:03 2021 # Report_file: c_0191_6.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # 12: usage_00065.pdb # 13: usage_00066.pdb # 14: usage_00067.pdb # 15: usage_00081.pdb # 16: usage_00082.pdb # 17: usage_00083.pdb # 18: usage_00096.pdb # 19: usage_00102.pdb # 20: usage_00103.pdb # # Length: 168 # Identity: 111/168 ( 66.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/168 ( 67.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/168 ( 2.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 --LDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDA 58 usage_00005.pdb 1 --LDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDA 58 usage_00006.pdb 1 CNLDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDA 60 usage_00007.pdb 1 --LDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDA 58 usage_00049.pdb 1 TNLDSARFRHLMGEKLGIHPSNCHGWVIGEHGDSSVPVWSGVNVAGVFLQGLNPDMGTDK 60 usage_00050.pdb 1 TNLDSARFRHLMGEKLGIHPSNCHGWVIGEHGDSSVPVWSGVNVAGVFLQGLNPDMGTDK 60 usage_00060.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00061.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00062.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00063.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00064.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00065.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00066.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00067.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00081.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDK 58 usage_00082.pdb 1 CNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 60 usage_00083.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00096.pdb 1 --LDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDA 58 usage_00102.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 usage_00103.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDA 58 LDSARFR LMGE LG H CHGW GEHGDSSVPVWSG NVAGV L L P GTD usage_00004.pdb 59 DKEQWKQVHKQVVDSAYEVIKLKGYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYG 118 usage_00005.pdb 59 DKEQWKQVHKQVVDSAYEVIKLKGYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYG 118 usage_00006.pdb 61 DKEQWKQVHKQVVDSAYEVIKLKGYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYG 120 usage_00007.pdb 59 DKEQWKQVHKQVVDSAYEVIKLKGYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYG 118 usage_00049.pdb 61 DKEDWKSVHKMVVDSAYEVIKLKGYTSWAIGMSAADLCQSILKNLRKCHPVSTLVKGMHG 120 usage_00050.pdb 61 DKEDWKSVHKMVVDSAYEVIKLKGYTSWAIGMSAADLCQSILKNLRKCHPVSTLVKGMHG 120 usage_00060.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00061.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00062.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00063.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00064.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00065.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00066.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00067.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00081.pdb 59 DKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYG 118 usage_00082.pdb 61 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 120 usage_00083.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00096.pdb 59 DKEQWKQVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00102.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 usage_00103.pdb 59 DKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG 118 DKE WK VHK VVdSAYEVIKLKGYT WAIG S ADL SI KNLR HP ST KG G usage_00004.pdb 119 IKEDVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL 166 usage_00005.pdb 119 IKEDVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL 166 usage_00006.pdb 121 IKEDVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL 168 usage_00007.pdb 119 IKEDVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL 166 usage_00049.pdb 121 VNEEVFLSVPCILGNSGLTDVVHMTLKSDEEKQLVKSAETLWGVQKDL 168 usage_00050.pdb 121 VNEEVFLSVPCILGNSGLTDVVHMTLKSDEEKQLVKSAETLWGVQKDL 168 usage_00060.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00061.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00062.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00063.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQK-- 164 usage_00064.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00065.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQK-- 164 usage_00066.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKE- 165 usage_00067.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00081.pdb 119 IKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKEL 166 usage_00082.pdb 121 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 168 usage_00083.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00096.pdb 119 IKEDVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL 166 usage_00102.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 166 usage_00103.pdb 119 IKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKE- 165 e VFLSVPC LG G DvV TL EE L KSA TLWG QK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################