################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:54 2021 # Report_file: c_1307_216.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00313.pdb # 2: usage_00576.pdb # 3: usage_01058.pdb # 4: usage_01164.pdb # 5: usage_02302.pdb # # Length: 28 # Identity: 3/ 28 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 28 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 28 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00313.pdb 1 -FKDDAEKYSKNKVWEVHAGGQVILCPT 27 usage_00576.pdb 1 NFNKEAQKYGSTNHWEVCYGSTVICS-- 26 usage_01058.pdb 1 --GDEAARFSTTGHYSVRDQDRVYAG-- 24 usage_01164.pdb 1 -FKDDAEKYSKNKVWEVHAGGQVILC-- 25 usage_02302.pdb 1 NFNKEAQKYGSTNHWEVCYGSTVIC--- 25 A ky weV g Vi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################