################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:38 2021 # Report_file: c_1135_19.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00023.pdb # 2: usage_00090.pdb # 3: usage_00417.pdb # # Length: 173 # Identity: 147/173 ( 85.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 149/173 ( 86.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/173 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -TLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE 59 usage_00090.pdb 1 STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE 60 usage_00417.pdb 1 -TLR-LSQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRL-DE 57 TLR smQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRL DE usage_00023.pdb 60 QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT 119 usage_00090.pdb 61 QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT 120 usage_00417.pdb 58 QQQQVKDDIAQLLN------ISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDA- 110 QQQQVKDDIAQLLN ISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDA usage_00023.pdb 120 MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDK 172 usage_00090.pdb 121 MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMD- 172 usage_00417.pdb 111 --HDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHV------------ 149 HDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################