################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:43 2021 # Report_file: c_1479_149.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00114.pdb # 2: usage_00115.pdb # 3: usage_00116.pdb # 4: usage_00233.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00360.pdb # 8: usage_00574.pdb # 9: usage_00575.pdb # 10: usage_00576.pdb # 11: usage_00582.pdb # 12: usage_01180.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 52 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 52 ( 73.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 -VEKIQEA--EMA---VEP--------D-----KQLVTLVEWAKRI------ 27 usage_00115.pdb 1 -VEKIQEA--EMA---VEP--------D-----KQLVTLVEWAKRI------ 27 usage_00116.pdb 1 -VEKIQEA--EMA---VEP--------D-----KQLVTLVEWAKRI------ 27 usage_00233.pdb 1 -VDKILEA--ELISKA-----AD----------RQLVTLVEWAKRI------ 28 usage_00234.pdb 1 -VDKILEA--ELI---SD---C-K-AAD-----RQLVTLVEWAKRI------ 30 usage_00235.pdb 1 -VDKILEA--ELI---SD--PNICKAAD-----RQLVTLVEWAKRI------ 33 usage_00360.pdb 1 CRALIKRI--QAM---IPK---------GGRM-------LPQLVCRLV---- 27 usage_00574.pdb 1 -VERILEA--ELA---VE---A----AD-----KQLFTLVEWAKRI------ 28 usage_00575.pdb 1 -VERILEA--ELA---VE---A----AD-----KQLFTLVEWAKRI------ 28 usage_00576.pdb 1 -VERILEA--ELA---VEPA-A-----D-----KQLFTLVEWAKRI------ 29 usage_00582.pdb 1 -VERILEAVTNIC---QA--------AD-----KQLFTLVEWAKRI------ 29 usage_01180.pdb 1 ----YEKM--AKA---TGK-------------LKPTSKDQVLAMLEKAKVNM 30 i a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################