################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:37 2021 # Report_file: c_0707_73.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00400.pdb # 2: usage_00402.pdb # 3: usage_00508.pdb # 4: usage_00510.pdb # 5: usage_00672.pdb # 6: usage_00673.pdb # # Length: 51 # Identity: 23/ 51 ( 45.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 51 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 51 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00400.pdb 1 EYGAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQ-- 49 usage_00402.pdb 1 -----YSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQ-- 44 usage_00508.pdb 1 EYGAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQ-- 49 usage_00510.pdb 1 EYGAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQ-- 49 usage_00672.pdb 1 -----QKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQVY 46 usage_00673.pdb 1 -----QKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQ-- 44 GP VIA M G MY KVG LVGE IR DGD A Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################