################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:51 2021 # Report_file: c_1254_135.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00181.pdb # 2: usage_00208.pdb # 3: usage_00585.pdb # 4: usage_00634.pdb # 5: usage_00862.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 50 ( 2.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 50 ( 56.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00181.pdb 1 NV-------AIFG---AT-----GAVGETMLEVLQEREFP-VDELFLLAS 34 usage_00208.pdb 1 --QVGKVSLVGAGMKS------HPGVTAEFMEALRDVNVN-IELISTSE- 40 usage_00585.pdb 1 --LYVGIGLEADF---H------PGTEGFLAQLLRRYPFDY-VIGSVHY- 37 usage_00634.pdb 1 --QVGKVSLVGA----------HPGVTAEFMEALRDVNVN-IELISTSE- 36 usage_00862.pdb 1 NL-------AIVG---VGKIVR-DQHLPSIAKNA---NFK-LVATAS--- 32 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################