################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:42 2021 # Report_file: c_0671_13.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00464.pdb # 4: usage_00516.pdb # 5: usage_00517.pdb # 6: usage_00518.pdb # 7: usage_00564.pdb # 8: usage_00715.pdb # 9: usage_00718.pdb # 10: usage_00847.pdb # # Length: 105 # Identity: 0/105 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/105 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 75/105 ( 71.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 usage_00005.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSV---- 26 usage_00464.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 usage_00516.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 usage_00517.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 usage_00518.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 usage_00564.pdb 1 ---------TSKIVEVKKF---FQITCE-NSYYQTLV-------NSTSLYKN-------- 32 usage_00715.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSV---- 26 usage_00718.pdb 1 FEVQLEPEE-KFYYID--DPDGLKVNIIAR------FLYGEQVD-GTAFVIFGVQDGDR- 49 usage_00847.pdb 1 ---------SVVEVKE--S---FYIHAMD----------------NIRANVIGFSVSNEN 30 v f i usage_00004.pdb 31 KPNEA-----GYTIRFKDFQKRFSLDK--QERIYRIEFYK-N--- 64 usage_00005.pdb 27 KPNEA-----GYTIRFKDFQKRFSLDK--QERIYRIEFYK----- 59 usage_00464.pdb 31 KPNEA-----GYTIRFKDFQKRFSLDK--QERIYRIEFYK----- 63 usage_00516.pdb 31 KPNEA-----GYTIKFKDFQKRFSLDK--QERIYRIEFYK----- 63 usage_00517.pdb 31 KPNEA-----GYTIKFKDFQKRFSLDK--QERIYRIEFYK----- 63 usage_00518.pdb 31 KPNEA-----GYTIKFKDFQKRFSLDK--QERIYRIEFYK----- 63 usage_00564.pdb 33 -----CKKLPTIKKNAE-----------FED-QGYYSCVH-F-LH 58 usage_00715.pdb 27 --NEA-----GYTIRFKDFQKRFSLDK--QERIYRIEFYK----- 57 usage_00718.pdb 50 -----------RI-------------SL--T--HSLTRVPIND-- 64 usage_00847.pdb 31 KPNEA-----GYTIKFKDFQKRFSLDK--QERIYRIEFYK----- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################