################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:15 2021 # Report_file: c_1254_98.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00603.pdb # 4: usage_00955.pdb # # Length: 49 # Identity: 4/ 49 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 49 ( 51.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 49 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -DVVVVCDESN---SIYPWDAVKNFLEKFVQGLDIGPTKTQVGLIQYA- 44 usage_00037.pdb 1 -DVVVVCDESN---SIYPWDAVKNFLEKFVQGLDIGPTKTQVGLIQYA- 44 usage_00603.pdb 1 PIFFFVVDLTSETE---NLDSLKESIITSLSLLPPN---ALIGLITYGN 43 usage_00955.pdb 1 -DIVIVLDGSN---SIYPWESVIAFLNDLLKRMDIGPKQTQVGIVQYG- 44 d v V D sn pwd vk fl ldig tqvGliqY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################