################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:19 2021 # Report_file: c_1200_337.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00241.pdb # 2: usage_00330.pdb # 3: usage_00707.pdb # 4: usage_01481.pdb # 5: usage_01679.pdb # 6: usage_01680.pdb # 7: usage_01681.pdb # 8: usage_02024.pdb # 9: usage_02113.pdb # 10: usage_03493.pdb # 11: usage_04526.pdb # 12: usage_04612.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 44 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 44 ( 75.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00241.pdb 1 -GTLYADSVKGR-TISR-DKGKNTVYLQDS-------------- 27 usage_00330.pdb 1 -YTRYADSVKGRFTISA-DTSKNTAYLQM-NS------------ 29 usage_00707.pdb 1 -STYYSDSVKGRFTISR-DSSMNTLYLQM-DS------------ 29 usage_01481.pdb 1 -GTYYASSVRGRFTISR-DNAKKTVYLQM-NS------------ 29 usage_01679.pdb 1 -RTYYADSVKGRFTISR-DNAKNTVYLQM-N------------- 28 usage_01680.pdb 1 -RTYYADSVKGRFTISR-DNAKNTVYLQM-N------------- 28 usage_01681.pdb 1 -RTYYADSVKGRFTISR-DNAKNTVYLQM-N------------- 28 usage_02024.pdb 1 -----------KWWFAGK----YIYLMLI-SSNKPTYVIRTHMM 28 usage_02113.pdb 1 DITYYADSVKGRFTFSQ-DNAKNTVYLQM-DS------------ 30 usage_03493.pdb 1 GTTRYLDTVKGRFTISR-DNAKSTVYLQM-NS------------ 30 usage_04526.pdb 1 SRTYYGDSVKGRFTISR-DNSKRTLYMQM-NS------------ 30 usage_04612.pdb 1 GDHIQQAKYRGRLKV-S-HKVPGDVSLQI-N------------- 28 r q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################