################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:24 2021 # Report_file: c_0016_7.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00044.pdb # 6: usage_00045.pdb # # Length: 314 # Identity: 196/314 ( 62.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 196/314 ( 62.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/314 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -KQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGS 59 usage_00012.pdb 1 -KQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGS 59 usage_00042.pdb 1 -EAVMEAQGSVLTNKYAEGYPGRR--GGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGP 57 usage_00043.pdb 1 -EAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGP 59 usage_00044.pdb 1 SEAVMEAQGSVLTNKYAEGYPGRR--GGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGP 58 usage_00045.pdb 1 -EAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGP 59 V EA GSVLTNKYAEGYPG R GGCE D ES AI RAKALFGA NVQPHSG usage_00011.pdb 60 QANMAVYMALMEPGDTLMGMD-----LAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELI 114 usage_00012.pdb 60 QANMAVYMALMEPGDTLMGMD-----LAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELI 114 usage_00042.pdb 58 QANMAVYLVALEMGDTVLGMN----LSH---------PVNFSGKFYNFVEYGVDKDTERI 104 usage_00043.pdb 60 QANMAVYLVALEMGDTVLGMNLSHA------------PVNFSGKFYNFVEYGVDKDTERI 107 usage_00044.pdb 59 QANMAVYLVALEMGDTVLGMN-----------------VNFSGKFYNFVEYGVDKDTERI 101 usage_00045.pdb 60 QANMAVYLVALEMGDTVLGMN----------------PVNFSGKFYNFVEYGVDKDTERI 103 QANMAVY E GDT GM VNFSGK Y V YGV DTE I usage_00011.pdb 115 DLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLH 174 usage_00012.pdb 115 DLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLH 174 usage_00042.pdb 105 NYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLH 164 usage_00043.pdb 108 NYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLH 167 usage_00044.pdb 102 NYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLH 161 usage_00045.pdb 104 NYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLH 163 EVR LALEH PK IVAGASAY R DFK F EIADEV A L VDMAH AGLVAAGLH usage_00011.pdb 175 PNPLPYAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVA 234 usage_00012.pdb 175 PNPLPYAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVA 234 usage_00042.pdb 165 PNPVEYADFVTTTTHKTLRGPRGGMILCK-EEYKKDIDKTIFPGIQGGPLEHVIAAKAVA 223 usage_00043.pdb 168 PNPVEYADFVTTTTHKTLRGPRGGMILCK-EEYKKDIDKTIFPGIQGGPLEHVIAAKAVA 226 usage_00044.pdb 162 PNPVEYADFVTTTTHKTLRGPRGGMILCK-EEYKKDIDKTIFPGIQGGPLEHVIAAKAVA 220 usage_00045.pdb 164 PNPVEYADFVTTTTHKTLRGPRGGMILCK-EEYKKDIDKTIFPGIQGGPLEHVIAAKAVA 222 PNP YA VT TTHKTLRGPRGG IL E K IDK IFPGIQGGPLEHVIA KAVA usage_00011.pdb 235 FFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEE 294 usage_00012.pdb 235 FFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEE 294 usage_00042.pdb 224 FGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAE 283 usage_00043.pdb 227 FGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAE 286 usage_00044.pdb 221 FGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAE 280 usage_00045.pdb 223 FGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAE 282 F EAL FK Y VV NAK LAE L G RIV GGTDNHL VD E usage_00011.pdb 295 RLDAV-GITVNKNA 307 usage_00012.pdb 295 RLDAV-GITVNKNA 307 usage_00042.pdb 284 ETLDSVGITCNKNT 297 usage_00043.pdb 287 ETLDSVGITCNKNT 300 usage_00044.pdb 281 ETLDSVGITCNKNT 294 usage_00045.pdb 283 ETLDSVGITCNKNT 296 GIT NKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################