################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:45 2021 # Report_file: c_1297_204.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_02193.pdb # 4: usage_02194.pdb # 5: usage_02830.pdb # 6: usage_02831.pdb # 7: usage_02832.pdb # 8: usage_02910.pdb # 9: usage_02911.pdb # 10: usage_03119.pdb # # Length: 32 # Identity: 1/ 32 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 32 ( 21.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 32 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQ-- 27 usage_00139.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQ-- 27 usage_02193.pdb 1 -LKSSIEST-N-EAVVKLQETAEKTVYVLTA- 28 usage_02194.pdb 1 -LKSSIEST-N-EAVVKLQETAEKTVYVLTA- 28 usage_02830.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQ-- 27 usage_02831.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQ-- 27 usage_02832.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQ-- 27 usage_02910.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQAV 29 usage_02911.pdb 1 -LKNAIQKT-N-AAVADVVQATQSLGTAVQAV 29 usage_03119.pdb 1 GEVNKIKSALLSTNKAVVSLSNGVSVLTFKVL 32 lk I t n av #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################