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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:55:16 2021
# Report_file: c_0431_5.html
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#====================================
# Aligned_structures: 3
#   1: usage_00039.pdb
#   2: usage_00089.pdb
#   3: usage_00090.pdb
#
# Length:        123
# Identity:      108/123 ( 87.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    108/123 ( 87.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           15/123 ( 12.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00039.pdb         1  ------KPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQGGLIRE   54
usage_00089.pdb         1  DVREITKPISS---------TKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQGGLIRE   51
usage_00090.pdb         1  DVREITKPISS---------TKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQGGLIRE   51
                                 KPISS         TKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQGGLIRE

usage_00039.pdb        55  RFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAK  114
usage_00089.pdb        52  RFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAK  111
usage_00090.pdb        52  RFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAK  111
                           RFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAK

usage_00039.pdb       115  IAG  117
usage_00089.pdb       112  IAG  114
usage_00090.pdb       112  IAG  114
                           IAG


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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