################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:56 2021 # Report_file: c_0667_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00076.pdb # 2: usage_00130.pdb # 3: usage_00131.pdb # 4: usage_00397.pdb # 5: usage_00406.pdb # 6: usage_00493.pdb # 7: usage_00704.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 62 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 62 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 -RVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAI 59 usage_00130.pdb 1 -RVKVELK--NGATYEAKIKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAI 56 usage_00131.pdb 1 HRVKVELK--NGATYEAKIKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAI 57 usage_00397.pdb 1 -NITVTML--DGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAI 57 usage_00406.pdb 1 -NVTV-YA--GDKPFEATVVSYDPSVDVAILAVPHLP--PPPLVFAAE-PAKTGADVVVL 53 usage_00493.pdb 1 -VIKVQLS--DGRKFDAK-VGKDPRSDIALIQIQNPK-NLTAIK-ADSDALRVGDYTVAI 54 usage_00704.pdb 1 --TTVTFS--DGRTAPFTVVGADPTSDIAVVRVQGVS-GLTPISLGSSS----------- 44 v D D A s usage_00076.pdb 60 GN 61 usage_00130.pdb 57 G- 57 usage_00131.pdb 58 GS 59 usage_00397.pdb 58 GN 59 usage_00406.pdb 54 G- 54 usage_00493.pdb 55 G- 55 usage_00704.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################