################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:38 2021 # Report_file: c_0016_5.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00037.pdb # 2: usage_00046.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # 9: usage_00053.pdb # 10: usage_00054.pdb # 11: usage_00055.pdb # # Length: 333 # Identity: 279/333 ( 83.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 283/333 ( 85.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/333 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 --AVREACATD----F-MH-------QGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 46 usage_00046.pdb 1 -LAVREACATDFMHRYAEGLP---LYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 56 usage_00047.pdb 1 SLAVREACATDFMHRYAEGLP---LYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 57 usage_00048.pdb 1 -LAVREACATDFMH--AEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 57 usage_00049.pdb 1 SLAVREACATDFMHRYAEGLP---LYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 57 usage_00050.pdb 1 SLAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 60 usage_00051.pdb 1 SLAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 60 usage_00052.pdb 1 -LAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 59 usage_00053.pdb 1 SLAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 60 usage_00054.pdb 1 SLAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 60 usage_00055.pdb 1 SLAVREACATDFMHRYAEGLPGKRLYQGCKYIDEVETLCIELSKELFKAEHANVQPTSGV 60 AVREACATD eg QGCKYIDEVETLCIELSKELFKAEHANVQPTSGV usage_00037.pdb 47 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 106 usage_00046.pdb 57 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 116 usage_00047.pdb 58 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 117 usage_00048.pdb 58 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 117 usage_00049.pdb 58 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 117 usage_00050.pdb 61 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 120 usage_00051.pdb 61 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 120 usage_00052.pdb 60 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 119 usage_00053.pdb 61 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 120 usage_00054.pdb 61 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAM 120 usage_00055.pdb 61 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVA-AGIRGLKVINHPFDPEEMNIDADAM 119 VANLAVFFAETKPGDKLMALSVPDGGHISHWKVs AGIRGLKVINHPFDPEEMNIDADAM usage_00037.pdb 107 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 166 usage_00046.pdb 117 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 176 usage_00047.pdb 118 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 177 usage_00048.pdb 118 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 177 usage_00049.pdb 118 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 177 usage_00050.pdb 121 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 180 usage_00051.pdb 121 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 180 usage_00052.pdb 120 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQ--DPLR 177 usage_00053.pdb 121 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 180 usage_00054.pdb 121 VKKILEEKPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 180 usage_00055.pdb 120 VKKIL--KPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQFQDPLR 177 VKKIL KPKLILFGGSLFPFPHPVADAYEAAQEVGAKIAYDGAHVLGLIAGKQ DPLR usage_00037.pdb 167 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 226 usage_00046.pdb 177 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 236 usage_00047.pdb 178 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 237 usage_00048.pdb 178 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPG-----HLHHKAGLAIALAEML 232 usage_00049.pdb 178 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 237 usage_00050.pdb 181 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 240 usage_00051.pdb 181 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 240 usage_00052.pdb 178 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 237 usage_00053.pdb 181 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVVSNHHLHHKAGLAIALAEML 240 usage_00054.pdb 181 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGV---HHLHHKAGLAIALAEML 237 usage_00055.pdb 178 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPGVV--HHLHHKAGLAIALAEML 235 EGAEYLMGSTHKTFFGPQGGVILTTKENADKIDSHVFPG HLHHKAGLAIALAEML usage_00037.pdb 227 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 286 usage_00046.pdb 237 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 296 usage_00047.pdb 238 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHK--DESHQVIIDIESSPDIEFSASELAK 295 usage_00048.pdb 233 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 292 usage_00049.pdb 238 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 297 usage_00050.pdb 241 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 300 usage_00051.pdb 241 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 300 usage_00052.pdb 238 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 297 usage_00053.pdb 241 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 300 usage_00054.pdb 238 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHK--TESHQVIIDIESSPDIEFSASELAK 295 usage_00055.pdb 236 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHKDFTESHQVIIDIESSPDIEFSASELAK 295 EFGEAYAKQVIKNAKALAQALYERGFNVLCEHK tESHQVIIDIESSPDIEFSASELAK usage_00037.pdb 287 MYEEANIILNKNLLPWDDVNNSDNPSGIRLGT- 318 usage_00046.pdb 297 MYEEANIILNKNLLPWDDVNNSDNPSGIRLGTQ 329 usage_00047.pdb 296 MYEEANIILNKNL-------------------- 308 usage_00048.pdb 293 MYEEANIILNKNLLPWDDVNNSDNPSGIRLGT- 324 usage_00049.pdb 298 MYEEANIILN----------------------- 307 usage_00050.pdb 301 MYEEANIILNKNL-------------------- 313 usage_00051.pdb 301 MYEEANIILNKNLLPWDDVNNSDNPSGIRLG-- 331 usage_00052.pdb 298 MYEEANIILNKNL-------------------- 310 usage_00053.pdb 301 MYEEANIILNKNL-------------------- 313 usage_00054.pdb 296 MYEEANIILN----------------------- 305 usage_00055.pdb 296 MYEEANIILNKNL-------------------- 308 MYEEANIILN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################