################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:04:34 2021 # Report_file: c_0115_2.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00020.pdb # 8: usage_00022.pdb # 9: usage_00023.pdb # 10: usage_00024.pdb # 11: usage_00025.pdb # 12: usage_00026.pdb # 13: usage_00027.pdb # 14: usage_00028.pdb # 15: usage_00029.pdb # 16: usage_00030.pdb # 17: usage_00031.pdb # 18: usage_00032.pdb # 19: usage_00033.pdb # 20: usage_00034.pdb # 21: usage_00035.pdb # 22: usage_00036.pdb # 23: usage_00037.pdb # 24: usage_00038.pdb # 25: usage_00041.pdb # 26: usage_00042.pdb # 27: usage_00043.pdb # 28: usage_00047.pdb # 29: usage_00048.pdb # 30: usage_00049.pdb # # Length: 122 # Identity: 62/122 ( 50.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/122 ( 56.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/122 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00003.pdb 1 -SIEITFPAT-----TAAPGAPHPFHLHGHVFAVVRSAGSTSYNYDDPVWRDVVSTGTPQ 54 usage_00004.pdb 1 -SIEITFPAT-----TAAPGAPHPFHLHGHVFAVVRSAGSTSYNYDDPVWRDVVSTGTPQ 54 usage_00017.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHTFAVVRSAGSSTYNYANPVYRDVVSTGSP- 53 usage_00018.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHTFAVVRSAGSSTYNYANPVYRDVVSTGSP- 53 usage_00019.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00020.pdb 1 -TIEITLPAT-----ALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPA 54 usage_00022.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHVFAVVRSAGSTVYNYSNPIFRDVVSTGTPA 54 usage_00023.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHTFAVVRSAGSSTYNYENPVYRDVVSTGSP- 53 usage_00024.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHTFAVVRSAGSSTYNYENPVYRDVVSTGSP- 53 usage_00025.pdb 1 -NIEISFPAT-----SAAAGGPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDTVSTGTPA 54 usage_00026.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHIFAVVRSAGSSTYNYANPVYRDVVSTGAP- 53 usage_00027.pdb 1 -DIEISLPAT-----SAAPGFPHPFHLHGHTFAVVRSAGSSTYNYANPVYRDVVSTGSP- 53 usage_00028.pdb 1 -DIEISLPAT-----SAAPGFPHPFHLHGHTFAVVRSAGSSTYNYANPVYRDVVSTGSP- 53 usage_00029.pdb 1 -SIEISFPAT-----ANAPGFPHPFHLHGHAFAVVRSAGSSVYNYDNPIFRDVVSTGQP- 53 usage_00030.pdb 1 -DIEISFPAT-----AAAPGAPHPFHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00031.pdb 1 -DIEISFPAT-----AAAPGAPHPFHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00032.pdb 1 -DIEISFPAT-----AAAPGAPHPFHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00033.pdb 1 -DIEISFPAT-----AAAPGAPHPFHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00034.pdb 1 --IEISLPAT-----AAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYRDVVSTGAP- 52 usage_00035.pdb 1 ADIEISLPAT-----AAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYRDVVSTGAP- 54 usage_00036.pdb 1 --IEISLPAT-----AAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYRDVVSTGAP- 52 usage_00037.pdb 1 -DIEISLPAT-----AAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYRDVVSTGAP- 53 usage_00038.pdb 1 -TIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSAGSSDYNYVNPVRRDTVSTGNP- 58 usage_00041.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHTFAVVRSAGSTVYNYSNPIFRDVVSTGTPA 54 usage_00042.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00043.pdb 1 -SIEISFPAT-----AAAPGAPHPFHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPA 54 usage_00047.pdb 1 -TIELSFPAT-----ANAPGVPHPFHLHGHTFAVVRSAGSTAYNYEDPVWRDVVSTGTPA 54 usage_00048.pdb 1 -TIELSFPAT-----ANAPGVPHPFHLHGHTFAVVRSAGSTAYNYEDPVWRDVVSTGTPA 54 usage_00049.pdb 1 ADIEISLPAT-----AAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYRDVVSTGAP- 54 IE PaT ApG PHPFHLHGH FaVVRSAGS YNY P RD VSTG P usage_00002.pdb 55 AGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAV--------------- 99 usage_00003.pdb 55 AGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAVVMAEDIPNTVNA--------------- 99 usage_00004.pdb 55 AGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAVVMAEDIPNTVNAN-------------- 100 usage_00017.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAAVN-------------- 98 usage_00018.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAAVN-------------- 98 usage_00019.pdb 55 AGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVN-------------- 100 usage_00020.pdb 55 AGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAAN-------------- 100 usage_00022.pdb 55 AGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQAEDVPDVKATN-------------- 100 usage_00023.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEV------------------ 94 usage_00024.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVAAT--------------- 97 usage_00025.pdb 55 ANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQDIPDVASAN-------------- 100 usage_00026.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 98 usage_00027.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVAATN-------------- 98 usage_00028.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVAATNPVPQAWSDLCPTYD 112 usage_00029.pdb 54 -GDNVTIRFETNNPGPWFLHCHIDFHLDAGFAVVMAEDTPDTKAAN-------------- 98 usage_00030.pdb 55 AGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVASAN-------------- 100 usage_00031.pdb 55 AGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVASAN-------------- 100 usage_00032.pdb 55 AGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVASAN-------------- 100 usage_00033.pdb 55 AGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVASAN-------------- 100 usage_00034.pdb 53 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 97 usage_00035.pdb 55 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 99 usage_00036.pdb 53 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 97 usage_00037.pdb 54 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 98 usage_00038.pdb 59 -GDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVFAEDTPDT------------------ 99 usage_00041.pdb 55 AGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQAEDVPDVKATN-------------- 100 usage_00042.pdb 55 AGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVN-------------- 100 usage_00043.pdb 55 AGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAV--------------- 99 usage_00047.pdb 55 AGDNVTIRFVTDNPGPWFLHCHIDFHLEAGFAVVFAEDLPGTPAAN-------------- 100 usage_00048.pdb 55 AGDNVTIRFVTDNPGPWFLHCHIDFHLEAGFAVVFAEDLPGTPAAN-------------- 100 usage_00049.pdb 55 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVAATN-------------- 99 gDNVTIRF T NpGPWFLHCHIDFHL GFA V AeD p usage_00002.pdb -- usage_00003.pdb -- usage_00004.pdb -- usage_00017.pdb -- usage_00018.pdb -- usage_00019.pdb -- usage_00020.pdb -- usage_00022.pdb -- usage_00023.pdb -- usage_00024.pdb -- usage_00025.pdb -- usage_00026.pdb -- usage_00027.pdb -- usage_00028.pdb 113 AL 114 usage_00029.pdb -- usage_00030.pdb -- usage_00031.pdb -- usage_00032.pdb -- usage_00033.pdb -- usage_00034.pdb -- usage_00035.pdb -- usage_00036.pdb -- usage_00037.pdb -- usage_00038.pdb -- usage_00041.pdb -- usage_00042.pdb -- usage_00043.pdb -- usage_00047.pdb -- usage_00048.pdb -- usage_00049.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################