################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:47 2021 # Report_file: c_1124_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00004.pdb # 2: usage_00244.pdb # 3: usage_00296.pdb # 4: usage_00297.pdb # 5: usage_00385.pdb # 6: usage_00392.pdb # 7: usage_00530.pdb # 8: usage_00531.pdb # 9: usage_00532.pdb # 10: usage_00533.pdb # 11: usage_00549.pdb # # Length: 77 # Identity: 3/ 77 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 77 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 77 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 RERKKTRTREAIRAATYGLIRQQGYEATTVEQIAERAEVSPSTVLRYFPTREDIVLTDEY 60 usage_00244.pdb 1 --EAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 58 usage_00296.pdb 1 ----QRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 56 usage_00297.pdb 1 ---AQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 57 usage_00385.pdb 1 ---RSAERLTRILDACADLLDEVGYDALSTRAVALRADVPIGSVYRFFGNKRQMADALAQ 57 usage_00392.pdb 1 ---RSIEKRNKILQVAKDLFSDKTYFNVTTNEIAKKADVSVGTLYAYFASKEDILTALLK 57 usage_00530.pdb 1 --EAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 58 usage_00531.pdb 1 ---AQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 57 usage_00532.pdb 1 --EAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 58 usage_00533.pdb 1 ---AQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 57 usage_00549.pdb 1 ----KAALREKLIDLAEAQIEAEGLASLRARELARQADCAVGAIYTHFQDLNALTLEVNG 56 r i gy A Adv g y F usage_00004.pdb 61 ---DPVAA-ELAAR--- 70 usage_00244.pdb 59 REFSRIDA-KT------ 68 usage_00296.pdb 57 REFSRIDA-K------- 65 usage_00297.pdb 58 REFSRIDA--------- 65 usage_00385.pdb 58 RNLERYAE-RVTERLTE 73 usage_00392.pdb 58 RYNDFFLT--------- 65 usage_00530.pdb 59 REFSRID---------- 65 usage_00531.pdb 58 REFSRIDA--------- 65 usage_00532.pdb 59 REFSRIDA-KT------ 68 usage_00533.pdb 58 REFSRIDA-K------- 66 usage_00549.pdb 57 RTFARLGAAV------- 66 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################