################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:32 2021 # Report_file: c_1319_89.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00174.pdb # 2: usage_00175.pdb # 3: usage_00196.pdb # 4: usage_00197.pdb # 5: usage_00198.pdb # 6: usage_00199.pdb # 7: usage_00200.pdb # 8: usage_00201.pdb # 9: usage_00202.pdb # 10: usage_00203.pdb # 11: usage_01242.pdb # 12: usage_01529.pdb # 13: usage_01530.pdb # 14: usage_01531.pdb # 15: usage_01532.pdb # 16: usage_02140.pdb # 17: usage_02141.pdb # 18: usage_02142.pdb # 19: usage_02143.pdb # 20: usage_02452.pdb # 21: usage_02453.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 40 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 40 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00175.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00196.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_00197.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00198.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00199.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_00200.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCV--- 33 usage_00201.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00202.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_00203.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_01242.pdb 1 ---REAVLRQDP---EGGYRLVHAE-GDLLPGLVVD---Y 30 usage_01529.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCV--- 33 usage_01530.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_01531.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_01532.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_02140.pdb 1 ITDAKKREALYA----TGCYMY-YFQ---YLSKTYCVD-- 30 usage_02141.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_02142.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_02143.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVD-- 34 usage_02452.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 usage_02453.pdb 1 ITDAKKREALYAQDPSTGCYMY-YFQ---YLSKTYCVDA- 35 akkrealya tGcymy yf ylsktyc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################