################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:30 2021 # Report_file: c_0457_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00228.pdb # 2: usage_00245.pdb # 3: usage_00246.pdb # 4: usage_00247.pdb # 5: usage_00248.pdb # 6: usage_00321.pdb # 7: usage_00358.pdb # # Length: 80 # Identity: 9/ 80 ( 11.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 80 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 80 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00228.pdb 1 KIEVYTQPDCPPCVIVKEFLKHNNVAYEEFDVKK-----DAAARNRLLYDYDSYSTPTVV 55 usage_00245.pdb 1 KIVMYGLSTCVWCKKTKKLLTDLGVDFEYVFVDLLEEEEKSNAIKQVSRFNPSVSFPTTI 60 usage_00246.pdb 1 KIVMYGLSTCVWCKKTKKLLTDLGVDFEYVFVDLLEEEEKSNAIKQVSRFNPSVSFPTTI 60 usage_00247.pdb 1 KIVMYGLSTCVWCKKTKKLLTDLGVDFEYVFVDLLEEEEKSNAIKQVSRFNPSVSFPTTI 60 usage_00248.pdb 1 KIVMYGLSTCVWCKKTKKLLTDLGVDFEYVFVDLLEEEEKSNAIKQVSRFNPSVSFPTTI 60 usage_00321.pdb 1 KVIMYGLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTI 60 usage_00358.pdb 1 AITVYTKPACVQCNATKKALDRAGLEYDLVDISL-----DEEAREYVLALG-YLQAPVVV 54 ki Y Cv C tKk L gv v v A v s s Pt usage_00228.pdb 56 ID-GEVVAGFQIEKLQQLL- 73 usage_00245.pdb 61 LNDEKAIVGFKEKQIREAL- 79 usage_00246.pdb 61 LNDEKAIVGFKEKQIREALG 80 usage_00247.pdb 61 LNDEKAIVGFKEKQIREAL- 79 usage_00248.pdb 61 LNDEKAIVGFKEKQIREAL- 79 usage_00321.pdb 61 INDEKAIVGFKEKEIRESLG 80 usage_00358.pdb 55 AD-GSHWSGFRPERIREMA- 72 GF ire l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################