################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:30:42 2021 # Report_file: c_0309_1.html ################################################################################################ #==================================== # Aligned_structures: 47 # 1: usage_00014.pdb # 2: usage_00033.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00044.pdb # 9: usage_00063.pdb # 10: usage_00064.pdb # 11: usage_00067.pdb # 12: usage_00073.pdb # 13: usage_00074.pdb # 14: usage_00084.pdb # 15: usage_00085.pdb # 16: usage_00086.pdb # 17: usage_00087.pdb # 18: usage_00088.pdb # 19: usage_00089.pdb # 20: usage_00090.pdb # 21: usage_00091.pdb # 22: usage_00098.pdb # 23: usage_00099.pdb # 24: usage_00110.pdb # 25: usage_00115.pdb # 26: usage_00116.pdb # 27: usage_00117.pdb # 28: usage_00118.pdb # 29: usage_00119.pdb # 30: usage_00123.pdb # 31: usage_00124.pdb # 32: usage_00125.pdb # 33: usage_00126.pdb # 34: usage_00127.pdb # 35: usage_00128.pdb # 36: usage_00129.pdb # 37: usage_00130.pdb # 38: usage_00131.pdb # 39: usage_00132.pdb # 40: usage_00133.pdb # 41: usage_00134.pdb # 42: usage_00147.pdb # 43: usage_00148.pdb # 44: usage_00154.pdb # 45: usage_00166.pdb # 46: usage_00167.pdb # 47: usage_00168.pdb # # Length: 149 # Identity: 50/149 ( 33.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/149 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/149 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00033.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00039.pdb 1 --KTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 50 usage_00040.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00041.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00042.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00043.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00044.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00063.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00064.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00067.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00073.pdb 1 --KTAENFRALCTGEK-----G---FGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYG 50 usage_00074.pdb 1 VPKTAENFRALCTGEK-----G---FGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYG 52 usage_00084.pdb 1 -----ENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 47 usage_00085.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00086.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00087.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00088.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00089.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00090.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00091.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00098.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00099.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00110.pdb 1 -----ENFRQFCTGEYKVNNLP---VGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYG 52 usage_00115.pdb 1 -PKTAKNFRELATGQH-----G---FGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYG 51 usage_00116.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYG 52 usage_00117.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYG 52 usage_00118.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYG 52 usage_00119.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYG 52 usage_00123.pdb 1 -PLTAKNFRELAKN--------PAGQGYTGSTFHRIIPQFMLQGGDFTNHNGTGGRSIYG 51 usage_00124.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00125.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00126.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00127.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00128.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00129.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00130.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00131.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00132.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00133.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00134.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00147.pdb 1 -PKTAANFRALCTGEK-----G---FGYAGSHFHRVIPDFMLQGGDFTAGNGTGGKSIYG 51 usage_00148.pdb 1 VPMTAENFRCLCTHEK-----G---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYG 52 usage_00154.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00166.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00167.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 usage_00168.pdb 1 VPKTAENFRALCTGEK-----G---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 52 NFR l t Gy s FHR Ip FM Q GDFt NGtGg SIYG usage_00014.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00033.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00039.pdb 51 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 108 usage_00040.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00041.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00042.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00043.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00044.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00063.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00064.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00067.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00073.pdb 51 GKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVD--GYDI 108 usage_00074.pdb 53 GKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVD--GYDI 110 usage_00084.pdb 48 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 105 usage_00085.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00086.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00087.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00088.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00089.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGQHVVFGHVIE--GMDV 110 usage_00090.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00091.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00098.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00099.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00110.pdb 53 EKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLL 112 usage_00115.pdb 52 EKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIE--GLDI 109 usage_00116.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00117.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00118.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00119.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00123.pdb 52 NKFKDENFQLKHTKPGLLSMANAGPHTNGSQFFITTVVTSWLDGKHVVFGEVVE--GMDV 109 usage_00124.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00125.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00126.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00127.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00128.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00129.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00130.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00131.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00132.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00133.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00134.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00147.pdb 52 AKFADENFQLKHNKPGLLSMANAGPNTNGSQFFITTVVTSWLDGKHVVFGEVID--GMNV 109 usage_00148.pdb 53 KKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTE--GLDV 110 usage_00154.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00166.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00167.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 usage_00168.pdb 53 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIE--GMDV 110 F DENF H pG LSMAN GpnTNGsQFFi t WLDGkhVVFG v g usage_00014.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00033.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00039.pdb 109 VKKIESFG--SKSGRTSKKIVITDCGQLS 135 usage_00040.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00041.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00042.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00043.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00044.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00063.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00064.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00067.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00073.pdb 109 VKKVESLG--SPSGATKARIVVAKSG--- 132 usage_00074.pdb 111 VKKVESLG--SPSGATKARIVVAKSG--- 134 usage_00084.pdb 106 VKKIESFG--SKSGRTSKKIVITDCGQLS 132 usage_00085.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00086.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00087.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00088.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00089.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00090.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00091.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00098.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00099.pdb 111 VKKIESFG--SKSGRTSKKIVITDCG--- 134 usage_00110.pdb 113 LKKIENVSVTPYIYKPKIPINVVECGE-- 139 usage_00115.pdb 110 VRKVEGKG--SASGKTNATIKITDCG--- 133 usage_00116.pdb 111 VKKIESFG--SKSGKTSKKIVITDCGQLS 137 usage_00117.pdb 111 VKKIESFG--SKSGKTSKKIVITDCGQLS 137 usage_00118.pdb 111 VKKIESFG--SKSGKTSKKIVITDCGQLS 137 usage_00119.pdb 111 VKKIESFG--SKSGKTSKKIVITDCGQLS 137 usage_00123.pdb 110 VKKVEAVG--TQSGKPSKVVKITASG--- 133 usage_00124.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00125.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00126.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00127.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00128.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00129.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00130.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00131.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00132.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00133.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00134.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00147.pdb 110 VKAIEAEG--SGSGKPRSRIEIAKCG--- 133 usage_00148.pdb 111 LRQIEAQG--SKDGKPKQKVIIADCG--- 134 usage_00154.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00166.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00167.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 usage_00168.pdb 111 VKKIESFG--SKSGRTSKKIVITDCGQLS 137 E g g G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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