################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:29 2021 # Report_file: c_1024_16.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00100.pdb # 2: usage_00101.pdb # 3: usage_00146.pdb # 4: usage_00232.pdb # 5: usage_00276.pdb # 6: usage_00293.pdb # 7: usage_00339.pdb # 8: usage_00340.pdb # 9: usage_00360.pdb # # Length: 51 # Identity: 8/ 51 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 51 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 51 ( 31.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 -VPFL-EFKA-PGIPSGMETLKDTPAP----RLLKTHLPLALLPQTLLDQK 44 usage_00101.pdb 1 -VPFL-EFKA-PGIPSGMETLKDTPAP----RLLKTHLPLALLPQTLLDQK 44 usage_00146.pdb 1 -FPFL-EMKI-PSLGSGLEQAHAMPSP----RILKTHLPFHLLPPSLLEKN 44 usage_00232.pdb 1 KVPML-EMTLPGLRTSGIEQLEKNPSP----RIVKTHLPTDLLPKSFWENN 46 usage_00276.pdb 1 -VPFL-EFKA-PGIPSGMETLKDTPAP----RLLKTHLPLALLPQTLLDQK 44 usage_00293.pdb 1 -FPFL-EMKI-----SGLEQAHAMPSP----RILKTHLPFHLLPPSLLEKN 40 usage_00339.pdb 1 RVPFL-EFKA-PGIPSGMETLKDTPAP----RLLKTHLPLALLPQTLLDQK 45 usage_00340.pdb 1 RVPFL-EFKA-PGIPSGMETLKDTPAP----RLLKTHLPLALLPQTLLDQK 45 usage_00360.pdb 1 ----LILATY-PKS-GTTWMHEILD--MILNQLIKTHLPSHLIPPSIWKEN 43 L e sg e p r KTHLP LlP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################