################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:58 2021 # Report_file: c_0165_12.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00052.pdb # 8: usage_00069.pdb # 9: usage_00075.pdb # 10: usage_00112.pdb # 11: usage_00154.pdb # 12: usage_00155.pdb # # Length: 141 # Identity: 15/141 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/141 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/141 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00008.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00009.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00010.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00011.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00012.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00052.pdb 1 GIVAGIGRV-E-----GVECMIVGNDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLV 54 usage_00069.pdb 1 GVVTGYGTV-D-----GRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGIN 54 usage_00075.pdb 1 GMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLA 60 usage_00112.pdb 1 GVVTGYGTI-D-----GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN 54 usage_00154.pdb 1 GVVTGYGTV-D-----GRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGIN 54 usage_00155.pdb 1 GVVTGYGTV-D-----GRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGIN 54 G V g gt Gr D Tv gG g k kv A k g P usage_00007.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00008.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00009.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00010.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00011.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00012.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00052.pdb 55 DSGGANLPRQDEVFPDREHF-GRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSDET 113 usage_00069.pdb 55 DSGGARIQEGVASL----GAYGEIFRRNTHASG-VIPQISLVVGPCAGGAVYSPAITDFT 109 usage_00075.pdb 61 ANSGARIG---ECI----RGSGLIAGATSRAYH-DIFTITLVTCRSVGIGAYLVRLGQRA 112 usage_00112.pdb 55 DGAGARIQEGVVSL----GLYSRIFRNNILASG-VIPQISLIMGAAAGGHVYSPALTDFV 109 usage_00154.pdb 55 DSGGARIQEGVASL----GAYGEIFRRNTHASG-VIPQISLVVGPCAGGAVYSPAITDFT 109 usage_00155.pdb 55 DSGGARIQEGVASL----GAYGEIFRRNTHASG-VIPQISLVVGPCAGGAVYSPAITDFT 109 d GAri If as IpqI l g gg Y pa d usage_00007.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00008.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00009.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00010.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00011.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00012.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00052.pdb 114 VMVREQATIFLAGPPLVKAAT 134 usage_00069.pdb 110 VMVDQTSHMFITGPDVIKTV- 129 usage_00075.pdb 113 IQVEGQPIILTG-APAINKML 132 usage_00112.pdb 110 IMVDQTSQMFITGPDVIKTV- 129 usage_00154.pdb 110 VMVDQTSHMFITGPDVIKTV- 129 usage_00155.pdb 110 VMVDQTSHMFITGPDVIKTV- 129 mV f p ik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################