################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:32 2021 # Report_file: c_1279_79.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00312.pdb # 2: usage_00422.pdb # 3: usage_00503.pdb # 4: usage_00660.pdb # 5: usage_00872.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 43 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 43 ( 62.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00312.pdb 1 VA--IFTTG---HTW-QFNNYQ---WNSPQELFQR-------- 26 usage_00422.pdb 1 -H--IIFTS---N-K-QVKSK-EDALN-NPYVKVMRRLG---- 29 usage_00503.pdb 1 -F--ILLADKKIS-N-I-RE--------MLPVLEAVAKAG--- 26 usage_00660.pdb 1 --YSITASR--L--ATEKHI--------DWLVAATVQAHAQLP 29 usage_00872.pdb 1 -H--IIFTS---N-K-KIKNK-EDALN-DPYVRVMLRLG---- 29 I v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################