################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:25 2021 # Report_file: c_0174_75.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00275.pdb # 2: usage_00408.pdb # 3: usage_00413.pdb # 4: usage_00448.pdb # 5: usage_00449.pdb # 6: usage_00450.pdb # 7: usage_00484.pdb # # Length: 145 # Identity: 33/145 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/145 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/145 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00275.pdb 1 PLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQARQVSIVKSVI---EHPNAARDE 57 usage_00408.pdb 1 PMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVK---IFESKPNACKDE 57 usage_00413.pdb 1 PVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFKKCK--------------- 45 usage_00448.pdb 1 PLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQVEMVK---RSG--------- 48 usage_00449.pdb 1 PLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQVEMVK---RSG--------- 48 usage_00450.pdb 1 PLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQVEMVK---RSG--------- 48 usage_00484.pdb 1 PMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVK---ISG--------- 48 P vS MDTvTE A a a Gg G H n qa qv vK usage_00275.pdb 58 KGRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPD-LPV 116 usage_00408.pdb 58 QGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH-LEI 116 usage_00413.pdb 46 ---GPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGS-RCI 101 usage_00448.pdb 49 --GLLVGAAVGVGGDAWVRAMMLVDAGVDVLVVDTAHAHNRLVLDMVGKLKSEVGDRVEV 106 usage_00449.pdb 49 --GLLVGAAVGVGGDAWVRAMMLVDAGVDVLVVDTAHAHNRLVLDMVGKLKSEVGDRVEV 106 usage_00450.pdb 49 --GLLVGAAVGVGGDAWVRAMMLVDAGVDVLVVDTAHAHNRLVLDMVGKLKSEVGDRVEV 106 usage_00484.pdb 49 --GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH-LEI 105 l VgaaVG R Lv AGvDv D H H V usage_00275.pdb 117 VAGNVATPEGTEALIKAGADAVKVG 141 usage_00408.pdb 117 IGGNVATAEGARALIEAGVSAVKVG 141 usage_00413.pdb 102 MAGNVATYAGADYLASCGADIIKAG 126 usage_00448.pdb 107 VGGNVATRSAAAALVDAGADAVKVG 131 usage_00449.pdb 107 VGGNVATRSAAAALVDAGADAVKVG 131 usage_00450.pdb 107 VGGNVATRSAAAALVDAGADAVKVG 131 usage_00484.pdb 106 IGGNVATAEGARALIEAGVSAVKVG 130 GNVAT a aL aG avKvG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################