################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:09 2021 # Report_file: c_0969_23.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00009.pdb # 2: usage_00016.pdb # 3: usage_00026.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00047.pdb # 7: usage_00094.pdb # 8: usage_00098.pdb # 9: usage_00099.pdb # 10: usage_00139.pdb # 11: usage_00164.pdb # 12: usage_00193.pdb # 13: usage_00194.pdb # 14: usage_00195.pdb # 15: usage_00201.pdb # 16: usage_00202.pdb # 17: usage_00215.pdb # # Length: 77 # Identity: 24/ 77 ( 31.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 77 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 77 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 DIVIQFGVAEHGDGYPFDGKDG-LLAHAFPP-G---PGI--QGDAHFDDDE-LWSLGKGV 52 usage_00016.pdb 1 DIMISFVRGDHRDNSPFDGPGG-NLAHAFDP-G---PGI--GGDAHFDEDE-RWTNNFRE 52 usage_00026.pdb 1 DIKIKWEKGNHGDGYPFD-GNTGILAHAFYP-PPAGGNY--AGHLHFDDDE-NWSINGSG 55 usage_00041.pdb 1 DIMINFGRWEHGDGYPFDGKDG-LLAHAFAP-G---TGV--GGDSHFDDDE-LWSLGKGV 52 usage_00042.pdb 1 DIMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 52 usage_00047.pdb 1 DIMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 52 usage_00094.pdb 1 DIMISFGIKEHGDFYPFDGPSG-LLAHAFPP-G---PNY--GGDAHFDDDE-TWTSSSKG 52 usage_00098.pdb 1 -IMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 51 usage_00099.pdb 1 -IMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 51 usage_00139.pdb 1 DINIAFYQRDHGDNSPFDGPNG-ILAHAFQP-G---QGI--GGDAHFDAEE-TWTNTSAN 52 usage_00164.pdb 1 DINIAFYQRDHGDNSPFDGPNG-ILAHAFQP-G---QGI--GGDAHFDAEE-TWTNTSAN 52 usage_00193.pdb 1 DIMISFGIKEHGDFYPFDGPSG-LLAHAFPP-G---PNY--GGDAHFDDDE-TWTSSSKG 52 usage_00194.pdb 1 DIMISFGIKEHGDFYPFDGPSG-LLAHAFPP-G---PNY--GGDAHFDDDE-TWTSSSKG 52 usage_00195.pdb 1 DIMISFGIKEHGDFYPFDGPSG-LLAHAFPP-G---PNY--GGDAHFDDDE-TWTSSSKG 52 usage_00201.pdb 1 DIMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 52 usage_00202.pdb 1 DIMISFAVREHGDFYPFDGPGN-VLAHAYAP-G---PGI--NGDAHFDDDE-QWTKDTTG 52 usage_00215.pdb 1 DIMIDFARYWHGDNLPFDGPGG-ILAHAFFPKT------HREGDVHFDYDETWTIGDNQG 53 I I f HgD PFD LAHA P Gd HFD E w usage_00009.pdb 53 GYSLFLVAAHEFGHALG 69 usage_00016.pdb 53 Y-NLHRVAAHELGHSLG 68 usage_00026.pdb 56 I-DLITVAAHEIGHLLG 71 usage_00041.pdb 53 GYSLFLVAAHEFGHAMG 69 usage_00042.pdb 53 T-NLFLVAAHEIGHSLG 68 usage_00047.pdb 53 T-NLFLVAAHEIGHSLG 68 usage_00094.pdb 53 Y-NLFLVAAHEFGHSLG 68 usage_00098.pdb 52 T-NLFLVAAHEIGHSL- 66 usage_00099.pdb 52 T-NLFLVAAHEIGHS-- 65 usage_00139.pdb 53 Y-NLFLVAAHEFGHSLG 68 usage_00164.pdb 53 Y-NLFLVAAHEFGHSLG 68 usage_00193.pdb 53 Y-NLFLVAAHAFGHSLG 68 usage_00194.pdb 53 Y-NLFLVAAHAFGHSLG 68 usage_00195.pdb 53 Y-NLFLVAAHAFGHSLG 68 usage_00201.pdb 53 T-NLFLVAAHEIGHSLG 68 usage_00202.pdb 53 T-NLFLVAAHEIGHSLG 68 usage_00215.pdb 54 T-DLLQVAAHEFGHVLG 69 L VAAH GH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################