################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:28 2021 # Report_file: c_0407_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00103.pdb # 2: usage_00104.pdb # 3: usage_00105.pdb # 4: usage_00106.pdb # 5: usage_00140.pdb # 6: usage_00141.pdb # 7: usage_00145.pdb # 8: usage_00146.pdb # 9: usage_00147.pdb # # Length: 84 # Identity: 80/ 84 ( 95.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/ 84 ( 95.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 84 ( 4.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 -FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 59 usage_00104.pdb 1 -FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 59 usage_00105.pdb 1 -FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 59 usage_00106.pdb 1 -FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 59 usage_00140.pdb 1 GFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 60 usage_00141.pdb 1 GFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 60 usage_00145.pdb 1 GFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 60 usage_00146.pdb 1 GFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 60 usage_00147.pdb 1 -FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII 59 FLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGII usage_00103.pdb 60 SFPDFKIPSNPRYGMWTIKAKY-- 81 usage_00104.pdb 60 SFPDFKIPSNPRYGMWTIKAKY-- 81 usage_00105.pdb 60 SFPDFKIPSNPRYGMWTIKAKY-- 81 usage_00106.pdb 60 SFPDFKIPSNPRYGMWTIKAKY-- 81 usage_00140.pdb 61 SFPDFKIPSNPRYGMWTIKAKYKE 84 usage_00141.pdb 61 SFPDFKIPSNPRYGMWTIKAKYKE 84 usage_00145.pdb 61 SFPDFKIPSNPRYGMWTIKAKY-- 82 usage_00146.pdb 61 SFPDFKIPSNPRYGMWTIKAKY-- 82 usage_00147.pdb 60 SFPDFKIPSNPRYGMWTIKAK--- 80 SFPDFKIPSNPRYGMWTIKAK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################