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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:22:49 2021
# Report_file: c_0245_12.html
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#====================================
# Aligned_structures: 10
#   1: usage_00085.pdb
#   2: usage_00086.pdb
#   3: usage_00199.pdb
#   4: usage_00200.pdb
#   5: usage_00201.pdb
#   6: usage_00202.pdb
#   7: usage_00203.pdb
#   8: usage_00241.pdb
#   9: usage_00242.pdb
#  10: usage_00243.pdb
#
# Length:        126
# Identity:      115/126 ( 91.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    115/126 ( 91.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/126 (  8.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00085.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00086.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00199.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00200.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00201.pdb         1  -PQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   59
usage_00202.pdb         1  -PQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   59
usage_00203.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00241.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00242.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
usage_00243.pdb         1  PPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV   60
                            PQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFV

usage_00085.pdb        61  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00086.pdb        61  VQNNR--------KQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  112
usage_00199.pdb        61  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00200.pdb        61  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00201.pdb        60  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  119
usage_00202.pdb        60  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  119
usage_00203.pdb        61  VQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00241.pdb        61  VQNNRFAASTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00242.pdb        61  VQNNRFAASTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
usage_00243.pdb        61  VQNNRFAASTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP  120
                           VQNNR        KQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGP

usage_00085.pdb       121  TLIE--  124
usage_00086.pdb       113  TLIE--  116
usage_00199.pdb       121  TLIE--  124
usage_00200.pdb       121  TLIE--  124
usage_00201.pdb       120  TLIETL  125
usage_00202.pdb       120  TLIE--  123
usage_00203.pdb       121  TLIE--  124
usage_00241.pdb       121  TLIE--  124
usage_00242.pdb       121  TLIE--  124
usage_00243.pdb       121  TLIE--  124
                           TLIE  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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