################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:11 2021 # Report_file: c_0904_40.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00106.pdb # 2: usage_00130.pdb # 3: usage_00267.pdb # 4: usage_00429.pdb # 5: usage_00430.pdb # 6: usage_00434.pdb # 7: usage_00435.pdb # 8: usage_00471.pdb # 9: usage_00587.pdb # # Length: 41 # Identity: 10/ 41 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 41 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 41 ( 36.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 -VYYCARTYGIYDLYVDY-----TE-YVMDYWGQGTLVTVS 34 usage_00130.pdb 1 -TYHCARRTFSYY-Y--G-----SSFYYFDNWGQGTTLTVS 32 usage_00267.pdb 1 -VYYCARNRDYS-----N------N-WYFDVWGTGTTVTVS 28 usage_00429.pdb 1 -TYFCARDSWDA-----S-----SY-YGLDLWGQGTLVTVS 29 usage_00430.pdb 1 -TYFCARDSWDA-----S-----SY-YGLDLWGQGTLVTVS 29 usage_00434.pdb 1 -TYFCARDSWDA-----S-----SY-YGLDLWGQGTLVTVS 29 usage_00435.pdb 1 -TYFCARDSWDA-----S-----SY-YGLDLWGQGTLVTVS 29 usage_00471.pdb 1 -TYYCARAVVFT-----DSSAYYYS-KYFDYWSQGTLVTVS 34 usage_00587.pdb 1 GVYFCARGTRD-------------G-SWFAYWGQGTPVTVS 27 Y CAR d WgqGT vTVS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################