################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:37 2021 # Report_file: c_0082_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00240.pdb # 2: usage_00241.pdb # 3: usage_00242.pdb # 4: usage_00243.pdb # 5: usage_00264.pdb # 6: usage_00274.pdb # # Length: 163 # Identity: 97/163 ( 59.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/163 ( 71.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/163 ( 0.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00240.pdb 1 -LDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 59 usage_00241.pdb 1 PLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 60 usage_00242.pdb 1 PLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 60 usage_00243.pdb 1 PLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 60 usage_00264.pdb 1 -LDSGVPLLCAGITAYSPMKRYGLDKPGKRIGIAGLGGLGHVALRFAKAFGAKVTVISSS 59 usage_00274.pdb 1 -LHSGVPLLCAGITTYSPLRRYGLDKPGLNIGIAGLGGLGHLAIRFAKAFGAKVTLISSS 59 Ld G PLLCAGIT YSPlk GLD PGk IGI GLGGLGHvA FAKAFG KVTvIS S usage_00240.pdb 60 PSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLIL 119 usage_00241.pdb 61 PSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLIL 120 usage_00242.pdb 61 PSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLIL 120 usage_00243.pdb 61 PSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLIL 120 usage_00264.pdb 60 LKKKREAFEKFGADSFLVSSNPEEMQGAAGTLDGIIDTIPGNHSLEPLLALLKPLGKLII 119 usage_00274.pdb 60 VKKKREALEKFGVDSFLLNSNPEEMQGAYGTLDGIIDTMPVAHSIVPFLALLKPLGKLII 119 KK EAl FGaDSFLvs E MQ AaGTLDGIIDT H l Pl LLK GKLI usage_00240.pdb 120 VGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH 162 usage_00241.pdb 121 VGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH 163 usage_00242.pdb 121 VGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH 163 usage_00243.pdb 121 VGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH 163 usage_00264.pdb 120 LGAPEMPFEVPAPSLLMGGKVMAASTAGSMKEIQEMIEFAAEH 162 usage_00274.pdb 120 LGVPEEPFEVPAPALLMGGKLIAGSAAGSMKETQEMIDFAAKH 162 GaPE P E PA sL G K AgS G MKEtQEMIdFAAkH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################