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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:38:20 2021
# Report_file: c_1413_5.html
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#====================================
# Aligned_structures: 7
#   1: usage_00401.pdb
#   2: usage_00900.pdb
#   3: usage_00901.pdb
#   4: usage_01067.pdb
#   5: usage_01068.pdb
#   6: usage_01433.pdb
#   7: usage_01434.pdb
#
# Length:         98
# Identity:       65/ 98 ( 66.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     65/ 98 ( 66.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           33/ 98 ( 33.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00401.pdb         1  --RAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP-QLLLP-----ALRPF   52
usage_00900.pdb         1  NARAFRDLYSELRLYYRGANLHL------FWARLLERL----------------------   32
usage_00901.pdb         1  --RAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPE----------ALRPF   48
usage_01067.pdb         1  --RAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLH-L-----GKQAEALRPF   52
usage_01068.pdb         1  --RAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP-QLL-------ALRPF   50
usage_01433.pdb         1  NARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERL---------------------F   39
usage_01434.pdb         1  ---AFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPE----------ALRPF   47
                              AFRDLYSELRLYYRGANLHL      FWARLLERL                      

usage_00401.pdb        53  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   90
usage_00900.pdb        33  --APRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   68
usage_00901.pdb        49  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   86
usage_01067.pdb        53  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   90
usage_01068.pdb        51  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   88
usage_01433.pdb        40  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   77
usage_01434.pdb        48  GEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV   85
                             APRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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