################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:07 2021 # Report_file: c_0579_37.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00079.pdb # 2: usage_00178.pdb # 3: usage_00296.pdb # 4: usage_00302.pdb # 5: usage_00303.pdb # 6: usage_00304.pdb # 7: usage_00316.pdb # 8: usage_00317.pdb # 9: usage_00318.pdb # 10: usage_00320.pdb # # Length: 91 # Identity: 11/ 91 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 91 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 91 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 ---LPIEVNPFGIHATRIAIEK-A---ADNLGLSGEITLRMN---GDDPFKTDGGHFIFD 50 usage_00178.pdb 1 KMPVPIEVIPQAWKAIIEELSI-F---N------AKAELRMGV-NKDGPVITDNGNFIID 49 usage_00296.pdb 1 ---VPIEILTFGYEKIIENLLK-IYTLK-----GCTYKIRKR---NGEIFITDNKNYIVD 48 usage_00302.pdb 1 ---IPVEVIPSAYRVVIRALSE-M---G------GEAVIRLGD-RKRGPVITDNGNMIID 46 usage_00303.pdb 1 ---IPVEVIPSAYRVVIRALSE-M---G------GEAVIRLGD-RKRGPVITDNGNMIID 46 usage_00304.pdb 1 KFPIPVEVIPSAYRVVIRALSE-M---G------GEAVIRLGD-RKRGPVITDNGNMIID 49 usage_00316.pdb 1 KMPVPIEVIPQAWKAIIEELSI-F---N------AKAELRMGV-NKDGPVITDNGNFIID 49 usage_00317.pdb 1 KMPVPIEVIPQAWKAIIEELSI-F---N------AKAELRMGV-NKDGPVITDNGNFIID 49 usage_00318.pdb 1 KMPVPIEVIPQAWKAIIEELSI-F---N------AKAELRMGV-NKDGPVITDNGNFIID 49 usage_00320.pdb 1 ---VPIEIVPSSYVRVKNDLLEQL---H-----AEKVDIRQGGSAKAGPVVTDNNNFIID 49 P E p l R p TDn n I D usage_00079.pdb 51 AFWG-RILQPKLLSEALLAIPGVVEHG---- 76 usage_00178.pdb 50 AKFP-RIDDPLDMEIELNTIPGVIENGIFAD 79 usage_00296.pdb 49 FFFTEPIQDLLETCTRIKMTTGVVDHGIFVN 79 usage_00302.pdb 47 VFM--NIDDAIELEKEINNIPGVVENGI--- 72 usage_00303.pdb 47 VFM--NIDDAIELEKEINNIPGVVENGI--- 72 usage_00304.pdb 50 VFM--NIDDAIELEKEINNIPGVVENGI--- 75 usage_00316.pdb 50 AKFP-RIDDPLDMEIELNTIPGVIENG---- 75 usage_00317.pdb 50 AKFP-RIDDPLDMEIELNTIPGVIENG---- 75 usage_00318.pdb 50 AKFP-RIDDPLDMEIELNTIPGVIENG---- 75 usage_00320.pdb 50 ADFG-EISDPRKLHREIKLLVGVVETGLFID 79 I d GV e G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################