################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:19 2021 # Report_file: c_0856_19.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00051.pdb # 4: usage_00052.pdb # 5: usage_00053.pdb # 6: usage_00075.pdb # 7: usage_00144.pdb # 8: usage_00145.pdb # 9: usage_00166.pdb # 10: usage_00167.pdb # 11: usage_00168.pdb # 12: usage_00169.pdb # 13: usage_00212.pdb # 14: usage_00258.pdb # 15: usage_00260.pdb # 16: usage_00316.pdb # 17: usage_00317.pdb # 18: usage_00384.pdb # 19: usage_00390.pdb # # Length: 94 # Identity: 5/ 94 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 94 ( 11.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 94 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00002.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00051.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00052.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00053.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00075.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00144.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00145.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00166.pdb 1 ---NPL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 55 usage_00167.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00168.pdb 1 -----L-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 53 usage_00169.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00212.pdb 1 ------PLAAAGYETLVQL--TPESYVEFERKAE-LEAGLRKAAEKHGIPHHINRAGS-I 50 usage_00258.pdb 1 ------PASASGIACLEVLQQEG-LYEKLDELGATLEKGILEQAAKHNIDITLNRLKGAL 53 usage_00260.pdb 1 FNNNVM-TMAAGYAGLTKLFTPE-AAGALAERGEALRARLNALCANEGVAMQFTGIGSLM 58 usage_00316.pdb 1 ----PL-AMTAGIHTLKRLKQAG-TYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMF 54 usage_00317.pdb 1 ----PL-AMTAGIHTLKRLKQAG-TYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMF 54 usage_00384.pdb 1 ----PL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 54 usage_00390.pdb 1 ---NPL-AMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 55 aG L L y l L g g usage_00001.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00002.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00051.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00052.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00053.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00075.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00144.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00145.pdb 55 GFFFTEGPVHNYEDAKK----------------- 71 usage_00166.pdb 56 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 89 usage_00167.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00168.pdb 54 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 87 usage_00169.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00212.pdb 51 GIFFTDEPVINYDAAKSSNLQFFAAYYREVEQG- 83 usage_00258.pdb 54 TVYFTTNTIEDYDAAQDT---------------- 71 usage_00260.pdb 59 NAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNED 92 usage_00316.pdb 55 GFFFAEGPVYNFADSKKSDTEKFGRFFRGMLEEG 88 usage_00317.pdb 55 GFFFAEGPVYNFADSKKSDTEKFGRFFRGMLEEG 88 usage_00384.pdb 55 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 88 usage_00390.pdb 56 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQG 89 F v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################