################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:23 2021 # Report_file: c_1082_142.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00141.pdb # 2: usage_00342.pdb # 3: usage_00435.pdb # 4: usage_00740.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 68 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 68 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 D--YDRLRPLSYPQTDV-FLVCFSVVSPSSFENV---KEKWVPEITHHCP---------- 44 usage_00342.pdb 1 -DHVFQESHSILDLDVDGYRIDHIDGL-------Y----DPEKYINDLRSIIKNIIIVE- 47 usage_00435.pdb 1 ---YDRLRPLSYPDTDV-ILMCFSIDSPDSLENI---PEKWTPEVKHFCP---------- 43 usage_00740.pdb 1 ---YHSLAPMYYRGAAA-AIIVFDVTN-------QASFERAKKWVQELQAQGN------P 43 y l p y f usage_00141.pdb 45 KTPFLLVG 52 usage_00342.pdb -------- usage_00435.pdb 44 NVPIILVG 51 usage_00740.pdb 44 NMVMALAG 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################