################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:20 2021 # Report_file: c_0642_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00020.pdb # 2: usage_00038.pdb # 3: usage_00062.pdb # 4: usage_00066.pdb # 5: usage_00079.pdb # 6: usage_00085.pdb # 7: usage_00092.pdb # 8: usage_00104.pdb # 9: usage_00107.pdb # 10: usage_00137.pdb # 11: usage_00141.pdb # # Length: 76 # Identity: 21/ 76 ( 27.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 76 ( 71.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 76 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00038.pdb 1 -VLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 56 usage_00062.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00066.pdb 1 -FVEISLNPHGTRALQKLIECIKT--DEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQR 57 usage_00079.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00085.pdb 1 -VLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 56 usage_00092.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00104.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00107.pdb 1 -VLPLALQMYGCRVIQKALESI-SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIEC 58 usage_00137.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 usage_00141.pdb 1 HVLSLALQMYGCRVIQKALEFI-P--SDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIEC 57 vl laLqmyGcRviQKalE I emV eLdghvlkcvKDqNGNHVvQKCiec usage_00020.pdb 58 VQPQSLQ--------- 64 usage_00038.pdb 57 VQPQSLQFIIDAFK-- 70 usage_00062.pdb 58 VQPQSLQ--------- 64 usage_00066.pdb 58 LKPENFQFIFDAISDS 73 usage_00079.pdb 58 VQPQSLQFIIDAFK-- 71 usage_00085.pdb 57 VQPQSLQFIIDAFK-- 70 usage_00092.pdb 58 VQPQSLQFIIDAF--- 70 usage_00104.pdb 58 VQPQSLQFIIDAFK-- 71 usage_00107.pdb 59 VQPQSLQFIIDAFK-- 72 usage_00137.pdb 58 VQPQSLQFIIDAFK-- 71 usage_00141.pdb 58 VQPQSLQFIIDAFK-- 71 vqPqslQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################