################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1453_122.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00108.pdb # 2: usage_00254.pdb # 3: usage_00403.pdb # 4: usage_00697.pdb # 5: usage_00809.pdb # 6: usage_00821.pdb # 7: usage_00954.pdb # 8: usage_01503.pdb # 9: usage_01530.pdb # 10: usage_01554.pdb # 11: usage_01719.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 48 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 48 ( 81.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 -----------K----VALVPGSAFL------KPGFVRLS-------- 19 usage_00254.pdb 1 -----------R----VAVVPGSAFGKA----GEGYVRIS-------- 21 usage_00403.pdb 1 M----K-----R--LGKVLHYAK----------QGFLIVR-------- 19 usage_00697.pdb 1 -----------N----LIAPEY------GFKISKRGSSGIMKT----- 22 usage_00809.pdb 1 ----VV-----E----PIGFTYGII-------DENAVERP-------- 20 usage_00821.pdb 1 -----------A----VAFIPGVAFGKY----GEGYLRIS-------- 21 usage_00954.pdb 1 VQYHPTGLP--GSG--ILM-TEGCRGE-------GGILVN-------- 28 usage_01503.pdb 1 -----------G----LIISAGNGYRGN----GHEFVRIN-------- 21 usage_01530.pdb 1 -----------S----VHCLPATCFE------YPNFFRVVIT------ 21 usage_01554.pdb 1 ---------IGG-VV-PVV---N--VP-------GIAAG----TLKLD 21 usage_01719.pdb 1 -----------H----VVTTPGSGFGPG----GEGFVRVS-------- 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################