################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:03:38 2021 # Report_file: c_0401_12.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00003.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00058.pdb # 7: usage_00075.pdb # 8: usage_00080.pdb # 9: usage_00082.pdb # 10: usage_00098.pdb # 11: usage_00099.pdb # 12: usage_00105.pdb # 13: usage_00113.pdb # 14: usage_00142.pdb # 15: usage_00156.pdb # 16: usage_00160.pdb # 17: usage_00161.pdb # 18: usage_00166.pdb # 19: usage_00168.pdb # 20: usage_00188.pdb # 21: usage_00207.pdb # 22: usage_00217.pdb # 23: usage_00218.pdb # 24: usage_00222.pdb # # Length: 78 # Identity: 27/ 78 ( 34.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 78 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 78 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --VLSQSPAILSASPGEKVIMTCSPSSSVS--YMQWYQQKPGSSPKPWIYSTSNLASGVP 56 usage_00009.pdb 1 QIQLTQSPSSLSASVGDRVTITCSASSQVN--HMFWYQQKPGKAPKPWIYLTSYLASGVP 58 usage_00010.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00027.pdb 1 QIVLTQSPAIMSASPGEKVTMTCSASSTVS--YMYWYQQKPGSSPRFLISDTSNLASGVP 58 usage_00028.pdb 1 QIVLTQSPAIMSASPGEKVTMTCSASSTVS--YMYWYQQKPGSSPRFLISDTSNLASGVP 58 usage_00058.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00075.pdb 1 --VLTQSPALMSASPGEKVTMTCSASSSVS--YMYWYQQKPRSSPKPWIYLTSNLASGVP 56 usage_00080.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00082.pdb 1 --VLTQSPTTMAASPGEKITITCSASSSISSNYLHWYQQKPGFSPKLLIYRTSNLASGVP 58 usage_00098.pdb 1 -VVLTQSPGIMSASPGEKVTITCSASSSVS--YMYWFQQKPGTSPKLWIYSTSNLASGVP 57 usage_00099.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVS--YIHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00105.pdb 1 --ELTQSPAIMAASPGEKVTITCSATSGVN--YMHWFQQKPGTSPKLWIYSTSNLASAVP 56 usage_00113.pdb 1 QIVLTQSPAIMSASPGEKVTLTCSASSTITSSFLYWYQQKPGSSPKLWIYSTSNLASGVP 60 usage_00142.pdb 1 --QLTQSPALMSASPGEKVTMTCSASSSVT--FMYWYQQKPRSSPKPWIYLTSNLASGVP 56 usage_00156.pdb 1 --VLTQSPAIMSASLGDRVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVP 58 usage_00160.pdb 1 -IVLTQSPAIMSASPGEKVTMTCSASSSVS--YMYWYHQKPGSSPKPWIYRTSNLASGVP 57 usage_00161.pdb 1 -IVLTQSPAIMSASPGEKVTMTCSASSSVS--YMYWYHQKPGSSPKPWIYRTSNLASGVP 57 usage_00166.pdb 1 -IVLSQSPAIMSASPGEKVTMTCSASSSVR--YMHWYQQKSGTSPKRWIYDTSKLASGVP 57 usage_00168.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASSSVS--YMHWYQQKSGTSPKRWIYDSSRLASGVP 56 usage_00188.pdb 1 DIELTQSPAIMSASPGEKVTMTCRASSTVSFHYLHWYQQKSGASPKLWIYATSNLASGVP 60 usage_00207.pdb 1 --VLSQSPAILSASPGEKVTMTCRASSSVT--YIHWYQQKPGSSPKSWIYATSNLASGVP 56 usage_00217.pdb 1 --VLTQSPDITAASLGQKVTITCSASSSVS--YMHWYQQKSGTSPKPWIFEISKLASGVP 56 usage_00218.pdb 1 QIVLTQSPAIMSASPGEKVTMTCSASSTVS--YMYWYQQKPGSSPRFLISDTSNLASGVP 58 usage_00222.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASSSVS--YMHWYQQKSGTSPKRWIYDTSKLASGVP 56 L QSP A G vt TC asS W QK sP I S L SgVP usage_00003.pdb 57 GRFSGGGSGTSFSLTISG 74 usage_00009.pdb 59 SRFSGSGSGTDYTLTISS 76 usage_00010.pdb 59 VRFSGSGSGTSYSLTINT 76 usage_00027.pdb 59 VRFSGSGSGTSYSLT--- 73 usage_00028.pdb 59 VRFSGSGSGTSYSLTISR 76 usage_00058.pdb 59 VRFSGSGSGTSYSLTINT 76 usage_00075.pdb 57 ARFCGSGSGTSYSLTISS 74 usage_00080.pdb 59 VRFSGSGSGTSYSLTINT 76 usage_00082.pdb 59 ARFSGSGSGTSYSLT--- 73 usage_00098.pdb 58 ARFRGSGSGTSYSLTISR 75 usage_00099.pdb 59 VRFSGSGSGTSYSLTINT 76 usage_00105.pdb 57 ARFSGSGSGTSYSLTISR 74 usage_00113.pdb 61 ARFSGSGSGTSYSLT--- 75 usage_00142.pdb 57 ARFSGSGSGTSYSLTISS 74 usage_00156.pdb 59 ARFSGSGSGTSYSLTIS- 75 usage_00160.pdb 58 ARFSGSGSGTSYSLSVSS 75 usage_00161.pdb 58 ARFSGSGSGTSYSLSVSS 75 usage_00166.pdb 58 TRFSGSGSGTSYSLPISS 75 usage_00168.pdb 57 SRFSGGGSGTSYSLTISN 74 usage_00188.pdb 61 ARFSGSGSGTSYSLTISS 78 usage_00207.pdb 57 ARFSGSGSGTSYSLTISR 74 usage_00217.pdb 57 ARFSGSGSGTSYSLTISS 74 usage_00218.pdb 59 VRFSGSGSGTSYSLT--- 73 usage_00222.pdb 57 ARFSGSGSGTSYSLT--- 71 RF G GSGTsysL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################