################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:16 2021 # Report_file: c_0277_6.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00081.pdb # 5: usage_00082.pdb # 6: usage_00198.pdb # 7: usage_00200.pdb # 8: usage_00201.pdb # 9: usage_00202.pdb # 10: usage_00262.pdb # # Length: 109 # Identity: 50/109 ( 45.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/109 ( 47.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/109 ( 19.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGNTGYNP 60 usage_00042.pdb 1 VQLRESGPSLVQPSQTLSLTCTASGFS---KAVGWVRQAPGKALEWLGSIDTGGSTGYNP 57 usage_00043.pdb 1 VQLRESGPSLVQPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGSTGYNP 60 usage_00081.pdb 1 -QLKESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA 59 usage_00082.pdb 1 ---KESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYNA 57 usage_00198.pdb 1 VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGTAGYNP 60 usage_00200.pdb 1 VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYNP 60 usage_00201.pdb 1 -QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYNP 59 usage_00202.pdb 1 -QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPEKALEWLGSIDTSGTTGYNS 59 usage_00262.pdb 1 VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGTAGYNP 60 ESGP LV PSQ LS TCT SGFS V WVRQ PgK LEWLG I gG YN usage_00041.pdb 61 GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTSVHQETKKYQSCPD 109 usage_00042.pdb 58 GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVHQETRK------ 100 usage_00043.pdb 61 GLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVHQETRKTC---- 105 usage_00081.pdb 60 AFISRLSISKDNSKSHVFFKMNSLQANDTAIYYC--------------- 93 usage_00082.pdb 58 AFISRLSISKDNSKSHVFFKMNSLQANDTAIYYC--------------- 91 usage_00198.pdb 61 GLKTRLSITKDNSKSQVSLTVSSVATEDSATYYCVTVYQKT-------- 101 usage_00200.pdb 61 GLKSRLSITKDNSKNQVSLSVSSATAEDSATYYCTTVHQKTLEVRSC-- 107 usage_00201.pdb 60 GLKSRLSITKDNSKNQVSLSVSSATAEDSATYYC--------------- 93 usage_00202.pdb 60 GLKSRLSIIKDNSKSQVSLSVSSVTTEDSATYYCTIVHQET-------- 100 usage_00262.pdb 61 GLKTRLSITKDNSKSQVSLTVSSVATEDSATYYCVTVYQKT-------- 101 RLSI KDNSK V S D A YYC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################