################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:37 2021 # Report_file: c_1317_29.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00162.pdb # 2: usage_00361.pdb # 3: usage_00408.pdb # 4: usage_00508.pdb # 5: usage_00678.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 64 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 64 ( 76.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00162.pdb 1 --HPEFLK------------------AGKE-PGLQIWRVEKFD-------LVPVPPNLYG 32 usage_00361.pdb 1 ----RPEE------------------LPALLEEGVLVVDVR--PARSTPLPFAAEWV--- 33 usage_00408.pdb 1 --HPEFLK------------------AGKE-PGLQIWRVEKFD-------LVPVPTNLYG 32 usage_00508.pdb 1 --HPEFLK------------------AGKE-PGLQIWRVEKFD-------LVPVPTNLYG 32 usage_00678.pdb 1 NQEMATLFKDKNVDIYGVEYYHLCYLCENA--ERSACIY--------------------- 37 l usage_00162.pdb 33 DFF- 35 usage_00361.pdb 34 ---P 34 usage_00408.pdb 33 DFF- 35 usage_00508.pdb 33 DFF- 35 usage_00678.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################