################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:36:30 2021 # Report_file: c_1309_121.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00146.pdb # 2: usage_00147.pdb # 3: usage_00148.pdb # 4: usage_00246.pdb # 5: usage_00247.pdb # 6: usage_00248.pdb # 7: usage_00251.pdb # 8: usage_00252.pdb # 9: usage_00307.pdb # 10: usage_00308.pdb # 11: usage_00309.pdb # 12: usage_00669.pdb # 13: usage_00670.pdb # 14: usage_00671.pdb # 15: usage_00672.pdb # 16: usage_00786.pdb # 17: usage_00787.pdb # 18: usage_00957.pdb # 19: usage_00958.pdb # 20: usage_00996.pdb # 21: usage_00997.pdb # 22: usage_00998.pdb # 23: usage_01094.pdb # 24: usage_01095.pdb # 25: usage_01203.pdb # 26: usage_01245.pdb # 27: usage_01269.pdb # 28: usage_01335.pdb # 29: usage_01399.pdb # 30: usage_01436.pdb # 31: usage_01458.pdb # 32: usage_01481.pdb # 33: usage_01482.pdb # # Length: 35 # Identity: 4/ 35 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 35 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 35 ( 48.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 SWQHGVFVGAAMRSEA--------G-KVIM-HD-P 24 usage_00147.pdb 1 SWQHGVFVGAAMRSEV-----------IMH-DP-- 21 usage_00148.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_00246.pdb 1 SWQHGVFVGAAMRSEA--------V-IMHD-P--- 22 usage_00247.pdb 1 SWQHGVFVGAAMRSEAT-------G--KVI-MH-- 23 usage_00248.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_00251.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_00252.pdb 1 SWQHGVFVGAAMRSEA--------G-KVIM-H--- 22 usage_00307.pdb 1 SWQHGVFVGAAMRSEAT-------AKGKVI-MHDP 27 usage_00308.pdb 1 SWQHGVFVGAAMRSEA--------G-KVIM-H--- 22 usage_00309.pdb 1 SWQHGVFVGAAMRSEAT-------A-GKVI-MH-- 24 usage_00669.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_00670.pdb 1 -SWQHGVFVGAARSEA--------K-IIHDP---- 21 usage_00671.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_00672.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_00786.pdb 1 SWQHGVFVGAAMRSEA--------V-IMHD-P--- 22 usage_00787.pdb 1 SWQHGVFVGAAMRSEATAAAEHKGK-VIMH-DP-- 31 usage_00957.pdb 1 SWQHGVFVGAAMRSEATAGAEHKGK-VIMH-DP-- 31 usage_00958.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_00996.pdb 1 SWQHGVFVGAAMRSEA--------G-KVIM-H--- 22 usage_00997.pdb 1 SWQHGVFVGAAMRSEAT-------K-VIMH-DP-- 24 usage_00998.pdb 1 SWQHGVFVGAAMRSEAT-------K-VIMH-DP-- 24 usage_01094.pdb 1 SWQHGVFVGAAMRSEATAAAEHKGK-VIMH-DP-- 31 usage_01095.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_01203.pdb 1 SWQHGVFVGAAMRSEG--------G-GIMH-DP-- 23 usage_01245.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_01269.pdb 1 SWQHGVFVGAAMRSEA--------G-KVIM-HD-P 24 usage_01335.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_01399.pdb 1 SWQHGVFVGAAMRSEA--------K-IIMH-DP-- 23 usage_01436.pdb 1 SWQHGVFVGAAMRSEAT-------K-VIMH-DP-- 24 usage_01458.pdb 1 SWQHGVFVGAAMRSEA--------K-VIMH-DP-- 23 usage_01481.pdb 1 SWQHGVFVGAAMRSEG--------G-GIMH-DP-- 23 usage_01482.pdb 1 SWQHGVFVGAAMRSEG--------G-GIMH-DP-- 23 wqhgvfvgaAmRSE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################