################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:38 2021 # Report_file: c_1422_94.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00444.pdb # 2: usage_00555.pdb # 3: usage_00811.pdb # 4: usage_01179.pdb # 5: usage_01187.pdb # 6: usage_01212.pdb # 7: usage_01213.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 61 ( 70.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00444.pdb 1 ------------ADAVACAKRVVRDP-Q----GIRA--------W-VAWRNR-------- 26 usage_00555.pdb 1 RGDYENLSDDALKHKTIEFKERLEKG-A----TTDD-----------------------L 32 usage_00811.pdb 1 ------------YARAAEIAKQALASGQTVMEVAISKGLD-----ASALTIM-------- 35 usage_01179.pdb 1 -------------EEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRL------- 40 usage_01187.pdb 1 -----------GYEEAAAVAKQALKERKTIRQTVIDRGLIGD-LSIEDLDRRLDVLAMA- 47 usage_01212.pdb 1 ------------YEEAAAVAKQALKERKTIRQTVIDRGLIGDKLSLEELDRR-------- 40 usage_01213.pdb 1 ------------YEEAAAVAKQALKERKTIRQTVIDRGLIGDKLSLEELDRR-------- 40 a usage_00444.pdb - usage_00555.pdb 33 L 33 usage_00811.pdb - usage_01179.pdb - usage_01187.pdb - usage_01212.pdb - usage_01213.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################