################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:43:56 2021 # Report_file: c_0150_2.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # 14: usage_00014.pdb # 15: usage_00015.pdb # 16: usage_00020.pdb # 17: usage_00021.pdb # 18: usage_00024.pdb # 19: usage_00025.pdb # 20: usage_00031.pdb # 21: usage_00032.pdb # 22: usage_00033.pdb # 23: usage_00035.pdb # 24: usage_00047.pdb # 25: usage_00048.pdb # 26: usage_00049.pdb # 27: usage_00050.pdb # 28: usage_00051.pdb # 29: usage_00052.pdb # 30: usage_00054.pdb # 31: usage_00055.pdb # 32: usage_00056.pdb # 33: usage_00057.pdb # 34: usage_00058.pdb # 35: usage_00059.pdb # # Length: 112 # Identity: 17/112 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/112 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/112 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDVNT-AVAWYQQKPGKAPKLLIYSASFLYSGVP 58 usage_00002.pdb 1 ---MTQSPSSLSARVGDTVTITCQAN----G-YLNWYQQRRGKAPKLLIYDGSKLERGVP 52 usage_00003.pdb 1 ---MTQSPSSLSARVGDTVTITCQAN----G-YLNWYQQRRGKAPKLLIYDGSKLERGVP 52 usage_00004.pdb 1 -LVLTQSPSSMYASLGERVTITCKASQDINS-YLNWFQQKPGKSPKTLIYRTNRLVDGVP 58 usage_00005.pdb 1 -LQLTQSPSSLSASVGDRITITCRASQGVTS-ALAWYRQKPGSPPQLLIYDASSLESGVP 58 usage_00006.pdb 1 -IVMTQTPKFLPVSAGDRVTIICKASQSVSN-DVVWYQQKPGQSPKLLIYYASIRYTGVP 58 usage_00007.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00008.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00009.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00010.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00011.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00012.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00013.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00014.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00015.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHN-YLAWYQQKQGKSPQLLVYNAKTLADGVP 59 usage_00020.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQSISS-YLNWYQQKPGKAPKLLIYAASSLQSGVP 57 usage_00021.pdb 1 -LQLTQSPSSLSASVGDRITITCRASQGVTS-ALAWYRQKPGSPPQLLIYDASSLESGVP 58 usage_00024.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQFLSSFGVAWYQQKPGKAPKLLIYGASSLYSGVP 59 usage_00025.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQFLSSFGVAWYQQKPGKAPKLLIYGASSLYSGVP 60 usage_00031.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISG-YLYWLQQKPDGTIKRLIYAGSTLDSGVP 58 usage_00032.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHN-YLAWYQQKQGKSPQLLVYNAKTLADGVP 59 usage_00033.pdb 1 --VMTQSPSSLSASVGDRVNIACRASQGISS-ALAWYQQKPGKAPRLLIYDASNLESGVP 57 usage_00035.pdb 1 --QMTQSPSSLSASVGDRVTITCRASRDIKS-YLNWYQQKPGKAPKVLIYYATSLAEGVP 57 usage_00047.pdb 1 -IVMTQTPKFLLVSAGDKVTITCKASQSVSN-DLTWYQQKPGQSPKLLIYYASNRYTGVP 58 usage_00048.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 57 usage_00049.pdb 1 DIQMTQSPASLSASVGETVTITCRASGNIHN-YLSWFQQKQGKSPQLLVYSAKTLADGVP 59 usage_00050.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSVSS-YLAWYQQKPGQAPRLLIYDASNRATGIP 57 usage_00051.pdb 1 -IVITQSPKFMSTSVGDRVSITCKASQDVST-AVAWFQQKPGQSPKLLIYSASYRYTGVP 58 usage_00052.pdb 1 DIVMTQTPASLSASVGESVTITCKASGNIHN-YLAWYQQKGGKSPQLLVFNASTLADGVP 59 usage_00054.pdb 1 ---MTQSPSSLSASVGDRVTITCRTSQSLSS-YTHWYQQKPGKAPKLLIYAASSRGSGVP 56 usage_00055.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSVSS-AVAWYQQKPGKAPKLLIYSASSLYSGVP 58 usage_00056.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISG-YLSWLQQKPDGTIKRLIYAASTLDSGVP 58 usage_00057.pdb 1 DIVMTQSQKFMSVTVGDRVSITCKTSQSVGT-TIVWYQQKPGQSPKLLIYSASNRHTGVP 59 usage_00058.pdb 1 --QMTQSPPSLSASLGDKVTITCQASQDINK-YIAWYQQKPGKAPRQLIRYTSILVLGTP 57 usage_00059.pdb 1 --LMTQIPSLLSASVGDRVTLNCKASHNINK-NLEWYQQKLGEAPKLLIYYANNLQTGIS 57 TQ p G C W Q L G p usage_00001.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYT-T-PPTFGQGTKVEIKRT 108 usage_00002.pdb 53 ARFSGRRWGQEYNLTINNLQPEDVATYFCQVY---E-FIV------------ 88 usage_00003.pdb 53 ARFSGRRWGQEYNLTINNLQPEDVATYFCQVY---E-FIV------------ 88 usage_00004.pdb 59 SRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDE-F-PYTFGSGTKLEIKRT 108 usage_00005.pdb 59 SRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHF-Y-PHTFGGGTRVDV--- 105 usage_00006.pdb 59 DRFTGSGYGTDFTFTISTVQVEDLAVYFCQQGFS-S-PRTFGGGTKLEINRA 108 usage_00007.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00008.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00009.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00010.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00011.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00012.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00013.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00014.pdb 59 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSYYYYPFTFGQGTKVEIKRT 110 usage_00015.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWS-T-PWTFGGGTKLEI--- 106 usage_00020.pdb 58 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYS-I-PLTFGQGTRLEIKRT 107 usage_00021.pdb 59 SRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHF-Y-PHTFGGGTRVDV--- 105 usage_00024.pdb 60 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQGLL-S-PLTFGQGTKVEIKRT 109 usage_00025.pdb 61 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQGLL-S-PLTFGQGTKVEI--- 107 usage_00031.pdb 59 KRFSGSRSGSDYSLTISSLESEDFADYYCLQYA-SY-PRTFGGGTKVEIKRT 108 usage_00032.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGTYYCHHFWS-T-PWTFGGGTKLEV--- 106 usage_00033.pdb 58 SRFSGSGSGTDFTLTISSLQPEDFAIYYCQQFNS-Y-PLTFGGGTKVEIKRT 107 usage_00035.pdb 58 SRFSGSGSGTDYTLTISSLQPEDFATYYCLQHGE-S-PWTFGQGTKVEIKRT 107 usage_00047.pdb 59 DRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYG-S-PPTFGGGTKVEIKRT 108 usage_00048.pdb 58 SRFSGSRSGTDFTLTISSLQPEDFATYYCQQSQW-Y-PITFGQGTKVEI--- 104 usage_00049.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGTYYCQHFWS-S-IYTFG---------- 99 usage_00050.pdb 58 ARFSGSGSGTDFTLTISSLEPEDFAVYYCQQSSN-W-PRTFGQGTKVEIKRT 107 usage_00051.pdb 59 DRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYS-T-PWTFGGGTKLEIKRA 108 usage_00052.pdb 60 SRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWS-T-PFTFGTGTNLEI--- 106 usage_00054.pdb 57 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQS------RTFGQGTKVEIKRT 102 usage_00055.pdb 59 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQYFY-W-PITFGQGTKVEIKRT 108 usage_00056.pdb 59 KRFSGSRSGSDYSLTISSLESEDFADYYCLQYAS-Y-PRTFGGGTKVEIKRT 108 usage_00057.pdb 60 DRFTGSGSGTDFILTINNVQSEDLADYFCQQYTS-Y-PFTFGSGTKLEI--- 106 usage_00058.pdb 58 SRFSGSGSGRDFSFSISNVASEDIASYYCLQYGN-L-YTFGAGTKLEIK-RA 106 usage_00059.pdb 58 SRFSGSGSGTDYTLTISSLQPEDVATYYCYQYNS-G-HTFGAGTKLEL---- 103 RF G G I ED Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################