################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:22 2021 # Report_file: c_0776_72.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00253.pdb # 2: usage_00254.pdb # 3: usage_00378.pdb # 4: usage_00809.pdb # 5: usage_00810.pdb # 6: usage_00811.pdb # 7: usage_00817.pdb # 8: usage_00818.pdb # 9: usage_00819.pdb # 10: usage_00820.pdb # 11: usage_00821.pdb # 12: usage_00822.pdb # # Length: 80 # Identity: 27/ 80 ( 33.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 80 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 80 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00253.pdb 1 RTAFRLVVIPEEMSILESERAMKALQKYGIPIDAVIVNQLIPE--DVQCDFCRARRELQL 58 usage_00254.pdb 1 RTAFRLVVIPEEMSILESERAMKALQKYGIPIDAVIVNQLIPE--DVQCDFCRARRELQL 58 usage_00378.pdb 1 -TTFVCVCIPEFLSLYETERMIQELANYGIDTHCIVVNQLLFPKPGSDCEQCTARRRMQK 59 usage_00809.pdb 1 MTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFP----GCEQCNARRKMQK 56 usage_00810.pdb 1 -TTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFP----GCEQCNARRKMQK 55 usage_00811.pdb 1 -TTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFP----GCEQCNARRKMQK 55 usage_00817.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 usage_00818.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 usage_00819.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 usage_00820.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 usage_00821.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 usage_00822.pdb 1 -TTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD-PNTTCPQCMARRKMQQ 58 T F V I E S E ER L Y I VNQL C C ARR Q usage_00253.pdb 59 KRLEMIKEKFGDKVIAY-VP 77 usage_00254.pdb 59 KRLEMIKEKFGDKVIAY-VP 77 usage_00378.pdb 60 KYLDQIEELYDEEFNVVKMP 79 usage_00809.pdb 57 KYLEQIEELYEDFNVVR-MP 75 usage_00810.pdb 56 KYLEQIEELYEDFNVVR-MP 74 usage_00811.pdb 56 KYLEQIEELYEDFNVVR-MP 74 usage_00817.pdb 59 KYLAQIEELYEDFHVVK-VP 77 usage_00818.pdb 59 KYLAQIEELYEDFHVVK-VP 77 usage_00819.pdb 59 KYLAQIEELYEDFHVVK-VP 77 usage_00820.pdb 59 KYLAQIEELYEDFHVVK-VP 77 usage_00821.pdb 59 KYLAQIEELYEDFHVVK-VP 77 usage_00822.pdb 59 KYLAQIEELYEDFHVVK-VP 77 K L I E d P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################