################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:35 2021 # Report_file: c_1480_67.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00245.pdb # 2: usage_00246.pdb # 3: usage_00247.pdb # 4: usage_00248.pdb # 5: usage_02331.pdb # 6: usage_02332.pdb # 7: usage_02960.pdb # 8: usage_03712.pdb # # Length: 40 # Identity: 5/ 40 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 40 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 40 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00245.pdb 1 MYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNC-- 38 usage_00246.pdb 1 ---KYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCL- 36 usage_00247.pdb 1 MYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNC-- 38 usage_00248.pdb 1 ---KYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNC-- 35 usage_02331.pdb 1 ---KYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCL- 36 usage_02332.pdb 1 ---KYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCL- 36 usage_02960.pdb 1 ---KYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCL- 36 usage_03712.pdb 1 ----WKEAVLRWAEEFSW----TEEEKTRFQNELETELKA 32 yrdAfLshlnEySl kEhiskyykllfdync #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################