################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:04 2021 # Report_file: c_1313_87.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00084.pdb # 2: usage_00141.pdb # 3: usage_00357.pdb # 4: usage_00397.pdb # 5: usage_00413.pdb # 6: usage_00565.pdb # 7: usage_00605.pdb # 8: usage_00614.pdb # 9: usage_00722.pdb # 10: usage_00723.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 50 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 50 ( 68.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 --------LQEALTMRQF-DHPHI-VKLIGVITE------NPVWII-ME- 32 usage_00141.pdb 1 ---------SDVEIQACF-RHENI-AELYGAVLW------GETVHL-FM- 31 usage_00357.pdb 1 --------LQEAQVLKKL-RHEKL-VQLYAVVSE------EPIYIV-ME- 32 usage_00397.pdb 1 ------------GEDAAK-DFLERDPTLWAVV-V-----AP-WVVI-QE- 28 usage_00413.pdb 1 -------SHDEGVRREHRK-------V-SYLFTLLE----QEGIWV-DA- 29 usage_00565.pdb 1 --------HPVIAKNYGK-WKY-------HEVVK------PGVIKR-VAE 27 usage_00605.pdb 1 LGSDLPRIKTEIEALKNL-RHQHI-CQLYHVLET------ANKIFMVLE- 41 usage_00614.pdb 1 ------------PEHLKD-AS-----SLLFVKLANPHSGEGATYLI-D-- 29 usage_00722.pdb 1 ---SPEAFLQEAQVMKKL-RHEKL-VQLYAVVSE------EPIYIV-TE- 37 usage_00723.pdb 1 --------LQEAQVLKKL-RHEKL-VQLYAVVSE------EPIYIV-ME- 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################