################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:19:46 2021 # Report_file: c_0024_12.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00147.pdb # 8: usage_00195.pdb # 9: usage_00196.pdb # 10: usage_00471.pdb # # Length: 255 # Identity: 58/255 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 126/255 ( 49.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/255 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00035.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00036.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00037.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00038.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00039.pdb 1 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV- 59 usage_00147.pdb 1 --------------------EALATMIGRETGKPLWEARTEVASMAAKVDISITAYHERT 40 usage_00195.pdb 1 -AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRV- 58 usage_00196.pdb 1 SAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRV- 59 usage_00471.pdb 1 SAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRV- 59 dd A i t E GKPL EA gE ly A f ewf eea rv usage_00034.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00035.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00036.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00037.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00038.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00039.pdb 60 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 119 usage_00147.pdb 41 GEKRAP--MADGVAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAP 98 usage_00195.pdb 59 YGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 118 usage_00196.pdb 60 YGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 119 usage_00471.pdb 60 YGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 119 ygd i r v qP GV A itPwNFP amitrk ALaAGcT v Pa tP usage_00034.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00035.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00036.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00037.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00038.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00039.pdb 120 LTALALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 176 usage_00147.pdb 99 GVARATVEIWRDAGLPAGVLNLVQG---E-KDTGVALANHRQIDGLFFTGSSDTGTLLHK 154 usage_00195.pdb 119 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 178 usage_00196.pdb 120 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 179 usage_00471.pdb 120 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 179 AlAl la AGiP GV e G v k sFTGSt G L usage_00034.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00035.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00036.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00037.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00038.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00039.pdb 177 QCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG-V 234 usage_00147.pdb 155 QFGGRPEIVLALEMGGNNPLVVAEVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAF 214 usage_00195.pdb 179 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRG-I 236 usage_00196.pdb 180 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRG-I 237 usage_00471.pdb 180 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRG-I 237 a kr s ElGG aPfiVfd a D AV gAm Sk rn GQt vC n VqRG usage_00034.pdb 235 YDKFAEKLAAKVKEL 249 usage_00035.pdb 235 YDKFAEKLAAKVKEL 249 usage_00036.pdb 235 YDKFAEKLAAKVKEL 249 usage_00037.pdb 235 YDKFAEKLAAKVKEL 249 usage_00038.pdb 235 YDKFAEKLAAKVKEL 249 usage_00039.pdb 235 YDKFAEKLAAKVKEL 249 usage_00147.pdb 215 GDRFVARLADVASKI 229 usage_00195.pdb 237 HDAFVKAFAEAMKKN 251 usage_00196.pdb 238 HDAFVKAFAEAMKK- 251 usage_00471.pdb 238 HDAFVKAFAEAMKK- 251 D F A k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################