################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:06:51 2021 # Report_file: c_1434_339.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00087.pdb # 2: usage_00101.pdb # 3: usage_00207.pdb # 4: usage_00208.pdb # 5: usage_00371.pdb # 6: usage_00874.pdb # 7: usage_00921.pdb # 8: usage_00956.pdb # 9: usage_00970.pdb # 10: usage_00973.pdb # 11: usage_01004.pdb # 12: usage_01158.pdb # 13: usage_01159.pdb # 14: usage_01803.pdb # 15: usage_01813.pdb # 16: usage_01947.pdb # 17: usage_01948.pdb # 18: usage_01949.pdb # 19: usage_01950.pdb # 20: usage_01954.pdb # 21: usage_01955.pdb # 22: usage_01957.pdb # 23: usage_01958.pdb # 24: usage_01960.pdb # 25: usage_01962.pdb # 26: usage_01963.pdb # 27: usage_01986.pdb # 28: usage_02138.pdb # 29: usage_02167.pdb # 30: usage_02183.pdb # 31: usage_02321.pdb # 32: usage_02443.pdb # 33: usage_02558.pdb # 34: usage_02679.pdb # 35: usage_02791.pdb # 36: usage_02793.pdb # 37: usage_02893.pdb # 38: usage_02900.pdb # 39: usage_02901.pdb # 40: usage_03086.pdb # 41: usage_03094.pdb # 42: usage_03391.pdb # 43: usage_03541.pdb # # Length: 61 # Identity: 53/ 61 ( 86.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 61 ( 86.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 61 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00101.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00207.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00208.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00371.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_00874.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00921.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00956.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00970.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00973.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01004.pdb 1 --NDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 58 usage_01158.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01159.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01803.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01813.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01947.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01948.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_01949.pdb 1 TVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01950.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01954.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01955.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01957.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01958.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01960.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_01962.pdb 1 TVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01963.pdb 1 TVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01986.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_02138.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_02167.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_02183.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_02321.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_02443.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_02558.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_02679.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_02791.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_02793.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_02893.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREI--- 56 usage_02900.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_02901.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_03086.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREI--- 57 usage_03094.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_03391.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_03541.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 59 NDI KLVGKLNWASQIYPGIKVRQL KLLRGTKALTEVIPLTEEAELELAENREI usage_00087.pdb - usage_00101.pdb 60 P 60 usage_00207.pdb 60 P 60 usage_00208.pdb 60 P 60 usage_00371.pdb 61 P 61 usage_00874.pdb - usage_00921.pdb 60 P 60 usage_00956.pdb - usage_00970.pdb - usage_00973.pdb 60 P 60 usage_01004.pdb 59 P 59 usage_01158.pdb 60 P 60 usage_01159.pdb 60 P 60 usage_01803.pdb - usage_01813.pdb - usage_01947.pdb - usage_01948.pdb - usage_01949.pdb 61 P 61 usage_01950.pdb - usage_01954.pdb 61 P 61 usage_01955.pdb 61 P 61 usage_01957.pdb 61 P 61 usage_01958.pdb 61 P 61 usage_01960.pdb 60 P 60 usage_01962.pdb 61 P 61 usage_01963.pdb 61 P 61 usage_01986.pdb - usage_02138.pdb 61 P 61 usage_02167.pdb - usage_02183.pdb - usage_02321.pdb 61 P 61 usage_02443.pdb - usage_02558.pdb - usage_02679.pdb 61 P 61 usage_02791.pdb - usage_02793.pdb - usage_02893.pdb - usage_02900.pdb - usage_02901.pdb - usage_03086.pdb - usage_03094.pdb 61 P 61 usage_03391.pdb - usage_03541.pdb 60 P 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################