################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:16 2021 # Report_file: c_1381_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00142.pdb # 6: usage_00207.pdb # 7: usage_00214.pdb # # Length: 76 # Identity: 26/ 76 ( 34.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 76 ( 56.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 76 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 --------------------VKERTEQIEHILKSSVVKVAYGSSNPKRSEPDLNILKDLI 40 usage_00139.pdb 1 --------------------VKERTEQIEHILKSSVVKVAYGSSNPKRSEPDLNILKDLI 40 usage_00140.pdb 1 -------------------SVKERTEQIEHILKSSVVKVAYGSSNPKRSEPDLNILKDLI 41 usage_00141.pdb 1 AKVALQAREILIQGALP--SVKERTEQIEHILKSSVV--AYGSSNP--SEPDLNILKDLI 54 usage_00142.pdb 1 --------------------VKERTEQIEHILKSSVVKVAYG------SEPDLNILKDLI 34 usage_00207.pdb 1 -----------------LPSVKERTEQIEHILKSSVVKVAYGSSNPKRSEPDLNILKDLI 43 usage_00214.pdb 1 -----------------------RTAQMEHILRSSVVQSRYGETGWSHRRPDREVLKEVV 37 RTeQiEHILkSSVV aYG sePDlniLKdli usage_00138.pdb 41 DSNYVVFDVLLQFLTH 56 usage_00139.pdb 41 DSNYVVFDVLLQFL-- 54 usage_00140.pdb 42 DSNYVVFDVLLQFLTH 57 usage_00141.pdb 55 DSNYVVFDVLLQFL-- 68 usage_00142.pdb 35 DSNYVVFDVLLQFLTH 50 usage_00207.pdb 44 DSNYVVFDVLLQFLTH 59 usage_00214.pdb 38 DSKYTVFDVLTLFFAH 53 DSnYvVFDVLlqFl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################