################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:11 2021 # Report_file: c_1069_13.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00142.pdb # 6: usage_00282.pdb # 7: usage_00308.pdb # 8: usage_00309.pdb # 9: usage_00310.pdb # 10: usage_00321.pdb # 11: usage_00462.pdb # 12: usage_00595.pdb # 13: usage_00596.pdb # 14: usage_00606.pdb # 15: usage_00607.pdb # 16: usage_00608.pdb # 17: usage_00610.pdb # 18: usage_00611.pdb # # Length: 50 # Identity: 1/ 50 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 50 ( 2.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 50 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -ILEAIKKD-ISIINQLPVVDK-NN-KLVGIISDGDIIRTISK------- 39 usage_00011.pdb 1 -ILEAIKKD-I-IINQLPVVDK-NN-KLVGIISDGDIIRTIS-------- 37 usage_00140.pdb 1 -LSEAEKILQKYKIEKLPLVDN-NG-VLQGLITIKDIEKVIEF------- 40 usage_00141.pdb 1 TIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR------ 44 usage_00142.pdb 1 TIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR------ 44 usage_00282.pdb 1 --KESAIYMQKHKIGCLPVVA--KD-VLVGIITDSDFVTIAINLLELQEE 45 usage_00308.pdb 1 SIMEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALAQN------ 42 usage_00309.pdb 1 -VDHVAIKMSKYNISGVPVVDD-YR-RVVGIVTSEDISRLFGGK------ 41 usage_00310.pdb 1 --MEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALAQN------ 40 usage_00321.pdb 1 DLETAERILHEHRIEKLPLVDN-SG-RLSGLITIKDIEKVIEF------- 41 usage_00462.pdb 1 -LNDAVHIMRQKRVDTIFVVDS-NN-HLLGFLDIEDINQGIRGH------ 41 usage_00595.pdb 1 TIRKALMTMNENKYRRLPVVNAGNN-KVVGIITSMDIVDFM--------- 40 usage_00596.pdb 1 -IDEAIETFLTKNVGGAPIVND-EN-QLISLITERDVIRAL--------- 38 usage_00606.pdb 1 SIMEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALAQN------ 42 usage_00607.pdb 1 -IMEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALA-------- 39 usage_00608.pdb 1 SIMEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALAQ------- 41 usage_00610.pdb 1 -IMEAAKILIKHNINHLPIVDE-HG-KLVGIITSWDIAKALAQ------- 40 usage_00611.pdb 1 -IDEAIETFLTKNVGGAPIVND-EN-QLISLITERDVIRAL--------- 38 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################