################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:40 2021 # Report_file: c_1428_122.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00256.pdb # 2: usage_00267.pdb # 3: usage_00315.pdb # 4: usage_00316.pdb # 5: usage_00346.pdb # 6: usage_00347.pdb # 7: usage_00348.pdb # 8: usage_00635.pdb # 9: usage_00636.pdb # 10: usage_00637.pdb # 11: usage_00638.pdb # 12: usage_00639.pdb # 13: usage_01277.pdb # 14: usage_01278.pdb # 15: usage_01279.pdb # 16: usage_01280.pdb # 17: usage_01281.pdb # 18: usage_01282.pdb # 19: usage_01807.pdb # 20: usage_01808.pdb # 21: usage_01944.pdb # 22: usage_01945.pdb # # Length: 50 # Identity: 31/ 50 ( 62.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 50 ( 62.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 50 ( 38.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00256.pdb 1 SDAEIIQLVNA-----------IETHERGVSIRRQLLSKKLSEPSSLQ-- 37 usage_00267.pdb 1 ----IIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 44 usage_00315.pdb 1 SDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQY- 49 usage_00316.pdb 1 SDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQY- 49 usage_00346.pdb 1 SDAEIIQLVNAK---------LIETHERGVSIRRQLLSKKLSEPSSLQ-- 39 usage_00347.pdb 1 --AEIIQLV----------ETLIETHERGVSIRRQLLSKKLSEPSSLQYL 38 usage_00348.pdb 1 --AEIIQLVN---------ETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 37 usage_00635.pdb 1 SDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQY- 49 usage_00636.pdb 1 SDAEIIQLVN--------LETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 40 usage_00637.pdb 1 -DAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 47 usage_00638.pdb 1 SDAEIIQLVN----A-YKLETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 43 usage_00639.pdb 1 SDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 48 usage_01277.pdb 1 ----IIQLVNAK-H-------LIETHERGVSIRRQLLSKKLSEPSSLQY- 37 usage_01278.pdb 1 SDAEIIQLVNAK-H-------LIETHERGVSIRRQLLSKKLSEPSSLQY- 41 usage_01279.pdb 1 SDAEIIQLVNAK---------LIETHERGVSIRRQLLSKKLSEPSSLQ-- 39 usage_01280.pdb 1 SDAEIIQLVN---------ETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 39 usage_01281.pdb 1 SDAEIIQLVNA-----------IETHERGVSIRRQLLSKKLSEPSSLQ-- 37 usage_01282.pdb 1 SDAEIIQLVNAK-H-------LIETHERGVSIRRQLLSKKLSEPSSLQY- 41 usage_01807.pdb 1 SDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQ-- 48 usage_01808.pdb 1 SDAEIIQLVNA-------LETLIETHERGVSIRRQLLSKKLSEPSSLQY- 42 usage_01944.pdb 1 SDAEIIQLVNAK-H-------LIETHERGVSIRRQLLSKKLSEPSSLQY- 41 usage_01945.pdb 1 SDAEIIQLVNAK-HI------LIETHERGVSIRRQLLSKKLSEPSSLQY- 42 IIQLV IETHERGVSIRRQLLSKKLSEPSSLQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################