################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:57:06 2021 # Report_file: c_0151_15.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00025.pdb # 10: usage_00032.pdb # 11: usage_00040.pdb # 12: usage_00041.pdb # 13: usage_00042.pdb # 14: usage_00043.pdb # 15: usage_00071.pdb # 16: usage_00072.pdb # 17: usage_00073.pdb # 18: usage_00080.pdb # 19: usage_00094.pdb # 20: usage_00095.pdb # 21: usage_00103.pdb # 22: usage_00132.pdb # 23: usage_00164.pdb # 24: usage_00204.pdb # 25: usage_00207.pdb # 26: usage_00208.pdb # 27: usage_00209.pdb # 28: usage_00224.pdb # 29: usage_00225.pdb # # Length: 126 # Identity: 40/126 ( 31.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/126 ( 40.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/126 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 VQLQESGGGLVQAGGSLRLSCAASGLTFDTYAMGWFRQAPGKKREYVAAISWTGISTYYA 60 usage_00003.pdb 1 VQLQESGGGLVQAGGSLRLSCAASGLTFDTYAMGWFRQAPGKKREYVAAISWTGISTYYA 60 usage_00011.pdb 1 -QLVQSGGGVVQPRRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGRNKYYA 59 usage_00012.pdb 1 -QLVQSGGGVVQPRRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGRNKYYA 59 usage_00021.pdb 1 INLVESGGGVVQPGRSLRLSCAASGFTFSRYGMHWVRQAPGKGLEWVAVVSSDGRTTYYA 60 usage_00022.pdb 1 INLVESGGGVVQPGRSLRLSCAASGFTFSRYGMHWVRQAPGKGLEWVAVVSSDGRTTYYA 60 usage_00023.pdb 1 INLVESGGGVVQPGRSLRLSCAASGFTFSRYGMHWVRQAPGKGLEWVAVVSSDGRTTYYA 60 usage_00024.pdb 1 INLVESGGGVVQPGRSLRLSCAASGFTFSRYGMHWVRQAPGKGLEWVAVVSSDGRTTYYA 60 usage_00025.pdb 1 INLVESGGGVVQPGRSLRLSCAASGFTFSRYGMHWVRQAPGKGLEWVAVVSSDGRTTYYA 60 usage_00032.pdb 1 VQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYA 60 usage_00040.pdb 1 VQLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYA 60 usage_00041.pdb 1 VQLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYA 60 usage_00042.pdb 1 VQLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYA 60 usage_00043.pdb 1 -QLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKFYE 59 usage_00071.pdb 1 VQLVESGGGLVQPGESLKLSCTASGFSLSNYYMTWVRQAPGKGLEWVTNIRPDETEKFYS 60 usage_00072.pdb 1 VQLVESGGGLVQPGESLKLSCTASGFSLSNYYMTWVRQAPGKGLEWVTNIRPDETEKFYS 60 usage_00073.pdb 1 VQLVESGGGLVQPGESLKLSCTASGFSLSNYYMTWVRQAPGKGLEWVTNIRPDETEKFYS 60 usage_00080.pdb 1 VQLVESGGGVVQPGRSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYA 60 usage_00094.pdb 1 -QLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKFYE 59 usage_00095.pdb 1 VQLVESGGGVVQPGRSLRLSCAASGFTFSVYGMNWVRQAPGKGLEWVAIIWYDGDNQYYA 60 usage_00103.pdb 1 -QLVESGGGVVQPGKSVRLSCVVSDFPFSKYPMYWVRQAPGKGLEWVAAISADAWHVVYS 59 usage_00132.pdb 1 VQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYA 60 usage_00164.pdb 1 VQLVESGGGVVQPGRSLRLDCKASGITFSNSGMHWVRQAPGKGLEWVAVIWYDGSKRYYA 60 usage_00204.pdb 1 VKLVQAGGGVVQPGRSLRLSCIASGFTFSNYGMHWVRQAPGKGLEWVAVIWYNGSRTYYG 60 usage_00207.pdb 1 -QLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKFYE 59 usage_00208.pdb 1 -QLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKFYE 59 usage_00209.pdb 1 VQLVESGGGLVQPGRSLRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSTISWNSGSIGYA 60 usage_00224.pdb 1 -QLQESGGGLVQPGGSLRLSCAASGFTFSSYSMSWVRQAPGKGLEWVAVISYDGSNKYYA 59 usage_00225.pdb 1 -QLQESGGGLVQPGGSLRLSCAASGFTFSSYSMSWVRQAPGKGLEWVAVISYDGSNKYYA 59 L sGGG VQ Sl LsC aSg y M W RQAPGK E V Y usage_00002.pdb 61 DIAKGRFTISRDNAKNTLYLQMDSLKPEDTAVYYCAAQKSLN-----VP-AP-WDYWGQG 113 usage_00003.pdb 61 DIAKGRFTISRDNAKNTLYLQMDSLKPEDTAVYYCAAQKSLN-----VP-AP-WDYWGQG 113 usage_00011.pdb 60 DSVKGRFTVSRDNSKNTLYLQMNSLRAEDTSVYYCARELLMDYYDHIG--YSPGPTWGQG 117 usage_00012.pdb 60 DSVKGRFTVSRDNSKNTLYLQMNSLRAEDTSVYYCARELLMDYYDHIG--YSPGPTWGQG 117 usage_00021.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGGDN-----K--FS-FDYWGQG 112 usage_00022.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGGDN-----K--FS-FDYWGQG 112 usage_00023.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGGDN-----K--FS-FDYWGQG 112 usage_00024.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGGDN-----K--FS-FDYWGQG 112 usage_00025.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVFYCAKEGGDN-----K--FS-FDYWGQG 112 usage_00032.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGS----------GL-LDYWGQG 109 usage_00040.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYD-----PT-AP-NDYWGQG 113 usage_00041.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYD-----PT-AP-NDYWGQG 113 usage_00042.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYD-----PT-AP-NDYWGQG 113 usage_00043.pdb 60 DSVKGRFTISRDNSKNTLYLQMDSLRAEDTAVYYCAREGAAVRSFYYSY-YG-MDVWGQG 117 usage_00071.pdb 61 DSVKGRFTVSRDNARNSLFNSMSLQRVEDTATYYCARVSDFG-----D--YG-PDFWGQG 112 usage_00072.pdb 61 DSVKGRFTVSRDNARNSLFNSMSLQRVEDTATYYCARVSDFG-----D--YG-PDFWGQG 112 usage_00073.pdb 61 DSVKGRFTVSRDNARNSLFNSMSLQRVEDTATYYCARVSDFG-----D--YG-PDFWGQG 112 usage_00080.pdb 61 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYD-----PT-AP-NDYWGQG 113 usage_00094.pdb 60 DSVKGRFTISRDNSKNTLYLQMDSLRAEDTAVYYCAREGAAVRSFYYSY-YG-MDVWGQG 117 usage_00095.pdb 61 DSVKGRFTISRDNSKNTLYLQMNGLRAEDTAVYYCARDLRT---------GP-FDYWGQG 110 usage_00103.pdb 60 GSVQGRFLVSRDNSKNILYLEMNTLKIEDTAVYRCARMFQESGPPNYYYYSG-MDVWGQG 118 usage_00132.pdb 61 DSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDSPRG-----E--LP-FDYWGQG 112 usage_00164.pdb 61 DSVKGRFTISRDNSKNTLFLQMNSLRAEDTAVYYCATND---------------DYWGQG 105 usage_00204.pdb 61 DSVKGRFTISRDNSKRTLYMQMNSLRTEDTAVYYCARDPDIL-----TA-FS-FDYWGQG 113 usage_00207.pdb 60 DSVKGRFTISRDNSKNTLYLQMDSLRAEDTAVYYCAREGAAVRSFYYSY-YG-MDVWGQG 117 usage_00208.pdb 60 DSVKGRFTISRDNSKNTLYLQMDSLRAEDTAVYYCAREGAAVRSFYYSY-YG-MDVWGQG 117 usage_00209.pdb 61 DSVKGRFTISRDNAKKSLYLQMNSLRAEDTALYYCAKDIQYG-----NYYYG-MDVWGQG 114 usage_00224.pdb 60 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDR------------Y-FDLWGRG 106 usage_00225.pdb 60 DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDR------------Y-FDLWGRG 106 d kGRFt SRDN L M EDT yCA WG G usage_00002.pdb 114 TQVTVS 119 usage_00003.pdb 114 TQVTVS 119 usage_00011.pdb 118 TLVTVS 123 usage_00012.pdb 118 TLVTVS 123 usage_00021.pdb 113 TLVTVS 118 usage_00022.pdb 113 TLVTVS 118 usage_00023.pdb 113 TLVTVS 118 usage_00024.pdb 113 TLVTVS 118 usage_00025.pdb 113 TLVTVS 118 usage_00032.pdb 110 TLVTVS 115 usage_00040.pdb 114 TLVTVS 119 usage_00041.pdb 114 TLVTVS 119 usage_00042.pdb 114 TLVTVS 119 usage_00043.pdb 118 TTVTVS 123 usage_00071.pdb 113 TLVSVT 118 usage_00072.pdb 113 TLVSVT 118 usage_00073.pdb 113 TLVSVT 118 usage_00080.pdb 114 TLVTVS 119 usage_00094.pdb 118 TTVTVS 123 usage_00095.pdb 111 TLVTVS 116 usage_00103.pdb 119 TTVTVS 124 usage_00132.pdb 113 TLVTVS 118 usage_00164.pdb 106 TLVTVS 111 usage_00204.pdb 114 VLVTVS 119 usage_00207.pdb 118 TTVTV- 122 usage_00208.pdb 118 TTVTVS 123 usage_00209.pdb 115 TTVTVS 120 usage_00224.pdb 107 TLVTVS 112 usage_00225.pdb 107 TLVTVS 112 t V V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################