################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:21 2021 # Report_file: c_1452_275.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00272.pdb # 2: usage_01374.pdb # 3: usage_01859.pdb # 4: usage_01860.pdb # 5: usage_02002.pdb # 6: usage_02073.pdb # 7: usage_02228.pdb # 8: usage_04381.pdb # 9: usage_04382.pdb # 10: usage_04383.pdb # 11: usage_05135.pdb # # Length: 22 # Identity: 1/ 22 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 22 ( 13.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 22 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00272.pdb 1 QAALVM-E----NELFCSGVLV 17 usage_01374.pdb 1 QVSLNS-G----YHFCGGSL-I 16 usage_01859.pdb 1 MVSLQL-R----GGHFCGATLI 17 usage_01860.pdb 1 MVSLQL-R----GGHFCGATL- 16 usage_02002.pdb 1 MVSLQL-R----GGHFCGATL- 16 usage_02073.pdb 1 MVSLQL-R----GGHFCGATL- 16 usage_02228.pdb 1 QISLQY-RSGSSWAHTCGGTLI 21 usage_04381.pdb 1 MVSLQL-R----GGHFCGATLI 17 usage_04382.pdb 1 MVSLQL-R----GGHFCGATL- 16 usage_04383.pdb 1 MVSLQL-R----GGHFCGATLI 17 usage_05135.pdb 1 QALLINEE----NEGFCGGTIL 18 L cg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################