################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:52 2021 # Report_file: c_1487_25.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01610.pdb # 2: usage_01616.pdb # 3: usage_02157.pdb # 4: usage_02158.pdb # 5: usage_03927.pdb # # Length: 66 # Identity: 11/ 66 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 66 ( 34.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 66 ( 43.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01610.pdb 1 RHADVWSAARDHQTFSSAQGL-TVNYGELEMIGLHDT------PPMVMQDPPVHTEFRKL 53 usage_01616.pdb 1 RHADVQTVLRDTATFSSDP--TRVIEGAS--------P---TPGMIHEIDPPEHRALRKV 47 usage_02157.pdb 1 RHADVQTVLRDTATFSSDP--TRVIEGAS--------P---TPGMIHEIDPPEHRALRKV 47 usage_02158.pdb 1 RHADVQTVLRDTATFSSDP--TRVIEGAS--------P---TPGMIHEIDPPEHRALRKV 47 usage_03927.pdb 1 KYEDVKRVLSDYKHFSSVR--K----------------SVPEKIQITESDPPDHRKRRSL 42 rhaDV vlrD tFSS i e DPP Hr Rk usage_01610.pdb 54 VSRGFT 59 usage_01616.pdb 48 VSSAF- 52 usage_02157.pdb 48 VSSAFT 53 usage_02158.pdb 48 V----- 48 usage_03927.pdb 43 L----- 43 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################