################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:11 2021 # Report_file: c_0563_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00007.pdb # 3: usage_00009.pdb # 4: usage_00197.pdb # 5: usage_00201.pdb # 6: usage_00202.pdb # 7: usage_00866.pdb # 8: usage_00868.pdb # 9: usage_00870.pdb # 10: usage_00929.pdb # 11: usage_00931.pdb # 12: usage_00971.pdb # 13: usage_01041.pdb # # Length: 76 # Identity: 18/ 76 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 76 ( 67.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 76 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 --TVNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 55 usage_00007.pdb 1 --TVNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 55 usage_00009.pdb 1 --TVNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 55 usage_00197.pdb 1 ---VQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 54 usage_00201.pdb 1 KGTVQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 57 usage_00202.pdb 1 ---VNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 54 usage_00866.pdb 1 --TVQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 55 usage_00868.pdb 1 KGTVQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 57 usage_00870.pdb 1 --TVNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 55 usage_00929.pdb 1 ---VQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 54 usage_00931.pdb 1 ---VQLTWSRASGKPV---QHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 54 usage_00971.pdb 1 ----------------GNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHE 44 usage_01041.pdb 1 -GTVNLTWSRASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 56 hstrkeekqrNGTltvtStlPVgTrDWieGEtyqCrVtHp usage_00005.pdb 56 HLPRALMRSTT----- 66 usage_00007.pdb 56 HLPRALMRSTTK---- 67 usage_00009.pdb 56 HLPRALMRSTT----- 66 usage_00197.pdb 55 HLPRALMRSTT----- 65 usage_00201.pdb 58 HLPRALMRSTT----- 68 usage_00202.pdb 55 HLPRALMRSTTK---- 66 usage_00866.pdb 56 HLPRALMRSTTKTSGP 71 usage_00868.pdb 58 HLPRALMRSTTKTSGP 73 usage_00870.pdb 56 HLPRALMRSTT----- 66 usage_00929.pdb 55 HLPRALMRSTT----- 65 usage_00931.pdb 55 HLPRALMRSTT----- 65 usage_00971.pdb 45 ELPLPLSKSVY----- 55 usage_01041.pdb 57 HLPRALMRSTT----- 67 hLPraLmrStt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################