################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:29 2021 # Report_file: c_0767_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00129.pdb # 2: usage_00130.pdb # 3: usage_00134.pdb # 4: usage_00135.pdb # 5: usage_00136.pdb # 6: usage_00137.pdb # 7: usage_00380.pdb # 8: usage_00381.pdb # 9: usage_00464.pdb # 10: usage_00465.pdb # 11: usage_00505.pdb # 12: usage_00506.pdb # 13: usage_00516.pdb # # Length: 70 # Identity: 29/ 70 ( 41.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 70 ( 48.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 70 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00130.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00134.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00135.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00136.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00137.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00380.pdb 1 KLVAFWDDNN-----DTKGWFSDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQQQ 55 usage_00381.pdb 1 KLVAFWDDNN------TKGWFSDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQQQ 54 usage_00464.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00465.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00505.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00506.pdb 1 KLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTD 60 usage_00516.pdb 1 KLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKRS-D 59 KL Af DDN gWF D T RF AYGWhVI dGHD I A eA usage_00129.pdb 61 KPSLLMCKTI 70 usage_00130.pdb 61 KPSLLMCKTI 70 usage_00134.pdb 61 KPSLLMCKTI 70 usage_00135.pdb 61 KPSLLMCKTI 70 usage_00136.pdb 61 KPSLLMCK-- 68 usage_00137.pdb 61 KPSLLMCKTI 70 usage_00380.pdb 56 KPTLICCK-- 63 usage_00381.pdb 55 KPTLICCK-- 62 usage_00464.pdb 61 KPSLLMCKTI 70 usage_00465.pdb 61 KPSLLMCKTI 70 usage_00505.pdb 61 KPSLLMCKTI 70 usage_00506.pdb 61 KPSLLMCKTI 70 usage_00516.pdb 60 KPSLICCK-- 67 KP L CK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################