################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:28 2021 # Report_file: c_1070_18.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00388.pdb # 2: usage_00578.pdb # 3: usage_00579.pdb # 4: usage_00580.pdb # 5: usage_00581.pdb # 6: usage_00582.pdb # 7: usage_00583.pdb # 8: usage_00584.pdb # 9: usage_00585.pdb # 10: usage_00586.pdb # 11: usage_00587.pdb # 12: usage_00588.pdb # # Length: 86 # Identity: 25/ 86 ( 29.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 86 ( 66.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 86 ( 33.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00388.pdb 1 ---------------SKRSTCNRAYVGAVLVKNNRIIATGYNGGVADTDNCDDVGHE--- 42 usage_00578.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00579.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00580.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00581.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00582.pdb 1 -PEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 52 usage_00583.pdb 1 --EIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 51 usage_00584.pdb 1 -PEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 52 usage_00585.pdb 1 --EIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 51 usage_00586.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00587.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 usage_00588.pdb 1 KPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFHT-------NCC 53 SqvSnCkRmkVGAivVKNgsIlAhGwNGtpsgfht usage_00388.pdb 43 M-ED-GHCIRTVHAEMNALIQCAKEG 66 usage_00578.pdb 54 ELEDGSTNPFVLHAEQNALVKMAKS- 78 usage_00579.pdb 54 ELEDGSTNPFVLHAEQNALVKMAKS- 78 usage_00580.pdb 54 ELEDGSTNPFVLHAEQNALVKMAK-- 77 usage_00581.pdb 54 ELEDGSTNPFVLHAEQNALVKMAK-- 77 usage_00582.pdb 53 ELEDGSTNPFVLHAEQNALVKMAKS- 77 usage_00583.pdb 52 ELEDGSTNPFVLHAEQNALVKMAKS- 76 usage_00584.pdb 53 ELEDGSTNPFVLHAEQNALVKMAK-- 76 usage_00585.pdb 52 ELEDGSTNPFVLHAEQNALVKMAKS- 76 usage_00586.pdb 54 ELEDGSTNPFVLHAEQNALVKMAKS- 78 usage_00587.pdb 54 ELEDGSTNPFVLHAEQNALVKMAKS- 78 usage_00588.pdb 54 ELEDGSTNPFVLHAEQNALVKMAKS- 78 e ED stnpfvlHAEqNALvkmAK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################