################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:39 2021 # Report_file: c_1084_227.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00018.pdb # 2: usage_00617.pdb # 3: usage_01600.pdb # 4: usage_01662.pdb # 5: usage_01663.pdb # # Length: 48 # Identity: 2/ 48 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 48 ( 14.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 48 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 KEAEHELKNS-HNVTLLIN-GELQ-YQSYSSYIQMASRYGVPFKIV-S 44 usage_00617.pdb 1 -ALISKMKEAGV-SIIYWG-G---LHTEAGLIIRQAADQGLKAKLVSG 42 usage_01600.pdb 1 --LAGLLHSIGA-RRVFVCGV--AYDFCVFFTAMDARKNGFSVVLL-- 41 usage_01662.pdb 1 -KLHETLQELGH-LDLIVC-G--FSHSSVSTTVRRAKDYGYRCTLV-- 41 usage_01663.pdb 1 --LHETLQELGH-LDLIVC-G--FSHSSVSTTVRRAKDYGYRCTLV-- 40 l l g A G lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################