################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:42 2021 # Report_file: c_1260_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00718.pdb # 2: usage_01144.pdb # 3: usage_01542.pdb # 4: usage_01543.pdb # 5: usage_01544.pdb # 6: usage_01545.pdb # 7: usage_01546.pdb # 8: usage_01547.pdb # # Length: 60 # Identity: 16/ 60 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 60 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 60 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00718.pdb 1 SGLHIIIFDEIDAICH---------------DTVVNQLLSKIDG-VEQ-LNNILVIGMT- 42 usage_01144.pdb 1 --PCVLFFDELDSI--AKAR----GDGGGAADRVINQILTEMDGMS--TKKNVFIIGATN 50 usage_01542.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 usage_01543.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 usage_01544.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 usage_01545.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 usage_01546.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 usage_01547.pdb 1 --PCVLFFDELDSI--AKARGGNIGDGGGAADRVINQILTEMDGMS--TKKNVFIIGAT- 53 pcvlfFDElDsI DrViNQiLtemDG s kkNvfiIGaT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################