################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:19 2021 # Report_file: c_0337_19.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00009.pdb # 2: usage_00078.pdb # 3: usage_00087.pdb # 4: usage_00088.pdb # 5: usage_00183.pdb # # Length: 127 # Identity: 11/127 ( 8.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/127 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/127 ( 33.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --RVDQSPSSLSASVGDRVTITCVLTDT-SYPL-YSTYWYQQKPGSSNKE-QISI----S 51 usage_00078.pdb 1 ELQVIQPDKSVSVAAGESAILHCTVTSLI---PVGPIQWFRGAGPA--RELIYNQKEGHF 55 usage_00087.pdb 1 -AWVDQTPRSVTKETGESLTINCALKNA-ADDL-ERTDWYRTTLGSTNEQ-KISI----G 52 usage_00088.pdb 1 -AWVDQTPRSVTKETGESLTINCALKNA-ADDL-ERTDWYRTTLGSTNEQ-KISI----G 52 usage_00183.pdb 1 --RVDQTPRIATKETGESLTINCVLRDT-ACAL-DSTNWYRTKLGSTKEQ-TISI----G 51 VdQ p s Ges ti C l l t Wyr gs isi usage_00009.pdb 52 GRYSESV-----NKGTKSFTLTISSLQPEDFATYYCRAMGT---------NI-WTGD--- 93 usage_00078.pdb 56 PRVTTVSESTKR--ENMDFSISISNITPADAGTYYCVKFRK-----GSPDTE-FKSGAGT 107 usage_00087.pdb 53 GRYVETV-----NKGSKSFSLRIRDLRVEDSGTYKCGAYFSDAMSNYSYPIP-GEKG--- 103 usage_00088.pdb 53 GRYVETV-----NKGSKSFSLRIRDLRVEDSGTYKCGAYFS-----------PGEKGAGT 96 usage_00183.pdb 52 GRYSETV-----DEGSNSASLTIRDLRVEDSGTYKCKAIDS---------CW-LRREG-- 94 gRy e v g sfsl I l eD gTY C a usage_00009.pdb ------- usage_00078.pdb 108 ELSVRAK 114 usage_00087.pdb ------- usage_00088.pdb 97 VLTVKAA 103 usage_00183.pdb ------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################