################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:09 2021 # Report_file: c_0505_46.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00142.pdb # 3: usage_00171.pdb # 4: usage_00224.pdb # 5: usage_00225.pdb # 6: usage_00259.pdb # 7: usage_00276.pdb # 8: usage_00397.pdb # 9: usage_00398.pdb # # Length: 125 # Identity: 2/125 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/125 ( 6.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/125 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ---------------IERGELFLRRISLSRNKIADLCHTFIKDGATILTHAYS------- 38 usage_00142.pdb 1 ---------------------------QADDQIASFAEIQIHPGDYVLAYQPS------- 26 usage_00171.pdb 1 SVEEVKELA------LREAEKLAEEDVERNRKMGEYGAELLEDGDVVLTYCNAGRLATVD 54 usage_00224.pdb 1 ----RRDIL------KSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFS------- 43 usage_00225.pdb 1 ----RRDIL------KSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFS------- 43 usage_00259.pdb 1 -VNEAKTNL------VHEAIQIQVEDEETCRLIGQNALQLFKKGDRIMTICNAGSIATSR 53 usage_00276.pdb 1 ----------------------------ALERIGEFGAKRIEDGDVIMTHCHS------- 25 usage_00397.pdb 1 -----------------NGKLFIQRARACRQRIAHLGYPLIRDGSVILTHGFS------- 36 usage_00398.pdb 1 ---------DMRAVIISGIQDVIDELDKINTDIEVQSMDHLHSNEIILTQGCS------- 44 g t usage_00006.pdb 39 -RVVLRVLEAAVAAKKRFSVYVTESQP-DLSG-K---K-AKALCHLNVPVTVVLDAAVGY 91 usage_00142.pdb 27 -KTVERFLVKAASK-RRFTVILASL-NQP--Y-A---ALRKKLNAAGVSTINLASNGLMA 77 usage_00171.pdb 55 WGTALGVVRSAVEQGKEIRVIACETRP-LNQGSR---LTCWELMEDGIDVTLITDSMVGI 110 usage_00224.pdb 44 -STVLEIIRTAKERKKRFKVILTESSP-DYEG-L---HLARELEFSGIEFEVITDAQMGL 97 usage_00225.pdb 44 -STVLEIIRTAKERKKRFKVILTESSP-DYEG-L---HLARELEFSGIEFEVITDAQMGL 97 usage_00259.pdb 54 YGTALAPFYLAKQKDLGLHIYACETRP-VLQGSR---LTAWELMQGGIDVTLITDSMAAH 109 usage_00276.pdb 26 -KAAISVMKTAWEQGKDIKVIVTETRP-KWQG-K---ITAKELASYGIPVIYVVDSAARH 79 usage_00397.pdb 37 -RGVAAVLLAAAKRHVRFKVFVTESRP-SGSG-C---LMTRTLKNACIPTCMVLDSAVSF 90 usage_00398.pdb 45 -KTVEAFLRFAAKK-RKFSVIVAEGFP-N-NQ-KGSHAMAKRLAQAGIDTTVISDATIFA 99 A v e p L d usage_00006.pdb 92 IEKA- 95 usage_00142.pdb 78 YIPRV 82 usage_00171.pdb 111 VMQKG 115 usage_00224.pdb 98 FCREA 102 usage_00225.pdb 98 FCREA 102 usage_00259.pdb 110 TMKE- 113 usage_00276.pdb 80 Y---- 80 usage_00397.pdb 91 TMNRV 95 usage_00398.pdb 100 I---- 100 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################