################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:33 2021 # Report_file: c_1050_62.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00019.pdb # 2: usage_00252.pdb # 3: usage_00411.pdb # 4: usage_00447.pdb # 5: usage_00448.pdb # 6: usage_00542.pdb # 7: usage_00638.pdb # 8: usage_00639.pdb # 9: usage_00821.pdb # # Length: 63 # Identity: 5/ 63 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 63 ( 30.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 63 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 ---IAIDALNAIYQFLSTIRQ-KDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPVYVF 56 usage_00252.pdb 1 -RKVAIDASMSIYQFLI-----------------TTSHLMGMFYRTIRMMENGIKPVYVF 42 usage_00411.pdb 1 --KIAIDALNAIYQFLSTIRQ-EDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAYVF 57 usage_00447.pdb 1 --RMAVDASIWIYQFLKAVRD--QN-A-----V-KNSHITGFFRRICKLLYFGIRPVFVF 49 usage_00448.pdb 1 DKRMAVDASIWIYQFLKAVR------------V-KNSHITGFFRRICKLLYFGIRPVFVF 47 usage_00542.pdb 1 ---VAIDASMSIYQFLI-----------------TTSHLMGMFYRTIRMMENGIKPVYVF 40 usage_00638.pdb 1 -RKVAIDASMSIYQFLIAVRQ--GGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVF 57 usage_00639.pdb 1 -RKVAIDASMSIYQFLIAVRQ--GGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVF 57 usage_00821.pdb 1 GKTIAVNLSLWVCEAQTV-KKM-MG------SV-MKPHLRNLFFRISYLTQMDVKLVFVM 51 A da iyqfl sH g F R gi pv Vf usage_00019.pdb 57 DGE 59 usage_00252.pdb --- usage_00411.pdb 58 DGK 60 usage_00447.pdb 50 DGG 52 usage_00448.pdb 48 DGG 50 usage_00542.pdb 41 DGK 43 usage_00638.pdb 58 DGK 60 usage_00639.pdb 58 DGK 60 usage_00821.pdb 52 EGE 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################