################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:52 2021 # Report_file: c_0039_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00166.pdb # 9: usage_00167.pdb # 10: usage_00168.pdb # # Length: 253 # Identity: 248/253 ( 98.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 248/253 ( 98.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/253 ( 1.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00042.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00043.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00050.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00051.pdb 1 --GSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 58 usage_00052.pdb 1 -AGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 59 usage_00053.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00166.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00167.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 usage_00168.pdb 1 AAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW 60 GSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW usage_00041.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00042.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00043.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00050.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00051.pdb 59 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 118 usage_00052.pdb 60 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 119 usage_00053.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00166.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00167.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 usage_00168.pdb 61 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF 120 PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCF usage_00041.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00042.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00043.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00050.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00051.pdb 119 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 178 usage_00052.pdb 120 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 179 usage_00053.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00166.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00167.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 usage_00168.pdb 121 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM 180 APRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFM usage_00041.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSY 240 usage_00042.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSY 240 usage_00043.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSY 240 usage_00050.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLISLLSLGSNGYKKLLKERKEMFSY 240 usage_00051.pdb 179 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGCKKLLKERKEMFSY 238 usage_00052.pdb 180 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGCKKLLKERKEMFSY 239 usage_00053.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGCKKLLKERKEMFSY 240 usage_00166.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLISLLSLGSNGYKKLLKERKEMFSY 240 usage_00167.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLISLLSLGSNGYKKLLKERKEMFSY 240 usage_00168.pdb 181 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLISLLSLGSNGYKKLLKERKEMFSY 240 VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLI LLSLGSNG KKLLKERKEMFSY usage_00041.pdb 241 LSNQIKKLSEAYN 253 usage_00042.pdb 241 LSNQIKKLSEAY- 252 usage_00043.pdb 241 LSNQIKKLSEAYN 253 usage_00050.pdb 241 LSNQIKKLSEAY- 252 usage_00051.pdb 239 LSNQIKKLSEAYN 251 usage_00052.pdb 240 LSNQIKKLSEAYN 252 usage_00053.pdb 241 LSNQIKKLSEAYN 253 usage_00166.pdb 241 LSNQIKKLSEAYN 253 usage_00167.pdb 241 LSNQIKKLSEAYN 253 usage_00168.pdb 241 LSNQIKKLSEAYN 253 LSNQIKKLSEAY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################