################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:53 2021 # Report_file: c_1291_130.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00172.pdb # 2: usage_00173.pdb # 3: usage_00174.pdb # 4: usage_00175.pdb # 5: usage_01040.pdb # # Length: 36 # Identity: 7/ 36 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 36 ( 69.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 36 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00172.pdb 1 --TAVAKHLKIEREGVLQSYEKEET---KKYYKI-- 29 usage_00173.pdb 1 SSTAVAKHLKIEREGVLQSYEK--EERFKKYYKI-- 32 usage_00174.pdb 1 SSTAVAKHLKIEREGVLQSYEK--T---KKYYKI-- 29 usage_00175.pdb 1 -STAVAKHLKIEREGVLQSYEK-------KYYKI-- 26 usage_01040.pdb 1 RSVIVNALRKLESAGVIESRSL--K---GTFIKVKK 31 taVakhlKiEreGVlqSyek kyyKi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################