################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:24 2021 # Report_file: c_1247_53.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00476.pdb # 2: usage_00550.pdb # 3: usage_00661.pdb # 4: usage_00672.pdb # 5: usage_00817.pdb # 6: usage_00818.pdb # 7: usage_00819.pdb # 8: usage_00820.pdb # 9: usage_00959.pdb # # Length: 36 # Identity: 3/ 36 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 36 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 36 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00476.pdb 1 R-GFLLDGFPRTVAQAEALEEILEEMGRPID-Y--- 31 usage_00550.pdb 1 --GFLLDGYPRTIEQAHALDKTLAELGIELE-G--- 30 usage_00661.pdb 1 -G------YIQDNHARLSLQNFLESHGIPFRLELRS 29 usage_00672.pdb 1 --GFLLDGFPRTVAQAEALETMLADIGRKLD-Y--- 30 usage_00817.pdb 1 --GFLLDGYPRTIEQAHALDKTLAELGIELE-G--- 30 usage_00818.pdb 1 --GFLLDGYPRTIEQAHALDKTLAELGIELE-G--- 30 usage_00819.pdb 1 --GFLLDGYPRTIEQAHALDKTLAELGIELE-G--- 30 usage_00820.pdb 1 --GFLLDGYPRTIEQAHALDKTLAELGIELE-G--- 30 usage_00959.pdb 1 --GFLLDGFPRTVAQAEALETMLADIGRKLD-Y--- 30 prt qa aL L G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################