################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:28 2021 # Report_file: c_0899_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00027.pdb # 4: usage_00028.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00082.pdb # 8: usage_00083.pdb # 9: usage_00084.pdb # 10: usage_00085.pdb # 11: usage_00086.pdb # 12: usage_00099.pdb # # Length: 89 # Identity: 63/ 89 ( 70.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/ 89 ( 85.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 89 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00026.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00027.pdb 1 SRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00028.pdb 1 SRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00048.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00049.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00082.pdb 1 SRSQRAGLQFPVGRIHRHLKSR----GRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 56 usage_00083.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00084.pdb 1 SRSQRAGLQFPVGRIHRHLKSR-----RVGATAAVYSAAILEYLTAEVLELAGNASKDLK 55 usage_00085.pdb 1 SRSQRAGLQFPVGRIHRHLKSR----GRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 56 usage_00086.pdb 1 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 60 usage_00099.pdb 1 SSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLK 60 SrSqRAGLQFPVGRIhRhLK r RVGatAAvYsaAiLEYLTAEVLELAGNAsKDLK usage_00025.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00026.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00027.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00028.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00048.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00049.pdb 61 VKRITPRHLQLAIRGDEELDSLI------ 83 usage_00082.pdb 57 VKRITPRHLQLAIRGDEELDSLIKATIAG 85 usage_00083.pdb 61 VKRITPRHLQLAIRGDEELDSLIKATIAG 89 usage_00084.pdb 56 VKRITPRHLQLAIRGDEELDSLIKATIAG 84 usage_00085.pdb 57 VKRITPRHLQLAIRGDEELDSLIKAT--- 82 usage_00086.pdb 61 VKRITPRHLQLAIRGDEELDSLIKA---- 85 usage_00099.pdb 61 VKRITPRHLQLAIRGDDELDSL------- 82 VKRITPRHLQLAIRGDeELDSL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################