################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:25 2021 # Report_file: c_1299_140.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00197.pdb # 2: usage_00198.pdb # 3: usage_00469.pdb # 4: usage_00672.pdb # 5: usage_00716.pdb # 6: usage_00736.pdb # 7: usage_00737.pdb # 8: usage_00771.pdb # 9: usage_00773.pdb # 10: usage_01081.pdb # 11: usage_01357.pdb # 12: usage_01377.pdb # # Length: 49 # Identity: 8/ 49 ( 16.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 49 ( 18.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 49 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00197.pdb 1 -GHRSALPHGVA----SDKRIERGDLVVIDLGALYNHYNSDITRTIV-- 42 usage_00198.pdb 1 -GHRSALPHGVA----SDKRIERGDLVVIDLGALYNHYNSDITRT---- 40 usage_00469.pdb 1 SGARAANPHGAP----ENVEIQENKLLLFDLGVMSGGYASDATRTIA-- 43 usage_00672.pdb 1 -GENAANPHHEP----GERKIRKGDIIILDYGARWKGYCSDIT------ 38 usage_00716.pdb 1 -GHATAFPHGIP----GVQHLRAGELVLIDTGCTVQGYHSDITRTWI-- 42 usage_00736.pdb 1 -GWRGALPHGKA----SDKIVAAGEFVTLDFGALYQGYCSDMT------ 38 usage_00737.pdb 1 -GWRGALPHGKA----SDKIVAAGEFVTLDFGALYQGYCSDMT------ 38 usage_00771.pdb 1 -GCRSALPHGKA----SDKVVERGDVIVIDFGATYENYCADIT------ 38 usage_00773.pdb 1 -GCRSALPHGKA----SDKVVERGDVIVIDFGATYENYCADIT------ 38 usage_01081.pdb 1 -GLRSALPHGVA----SEKVIETGDFVTLDFGAYYKGYCSDITRTIAVG 44 usage_01357.pdb 1 -GDHAALPHYKPLGESGNRKAAANQVFLLDSGAHYGDGTTDVTRTVWYT 48 usage_01377.pdb 1 -GPNGANPHHRP----SHRKIRKGDVVIFDYGAKYLGYCSDVTRTVV-- 42 G A PH D G y D T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################