################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:04 2021 # Report_file: c_0173_42.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00061.pdb # 4: usage_00062.pdb # 5: usage_00064.pdb # 6: usage_00185.pdb # # Length: 123 # Identity: 5/123 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/123 ( 28.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/123 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -NIALIGYG--FVGKTFHAPLIRSVP-GLNLAFVASRDEEKVKRDL-P-DVTVIASPEAA 54 usage_00005.pdb 1 -NIALIGYG--FVGKTFHAPLIRSVP-GLNLAFVASRDEEKVKRDL-P-DVTVIASPEAA 54 usage_00061.pdb 1 -KVGILGYG--LSGSVFHGPLLDVLD-EYQISKIMTSRTEEVKRDF-P-DAEVVHELEEI 54 usage_00062.pdb 1 -KVGILGYG--LSGSVFHGPLLDVLD-EYQISKIMTSRTEEVKRDF-P-DAEVVHELEEI 54 usage_00064.pdb 1 -KVGILGYG--LSGSVFHGPLLDVLD-EYQISKIMTSRTEEVKRDF-P-DAEVVHELEEI 54 usage_00185.pdb 1 MKVAVQGLGNV---GKNLCRHLHEHDV--Q-LFVSDVDPIKAEEVKRLFGATVV-EPTEI 53 GyG fh pl e vkrd p d V e usage_00004.pdb 55 VQHPDVDLVVIASPNAT-HAPLARLALNAGKHVVVDKP-FTLDQEARELIALAEEK-QRL 111 usage_00005.pdb 55 VQHPDVDLVVIASPNAT-HAPLARLALNAGKHVVVDKP-FTLDQEARELIALAEEK-QRL 111 usage_00061.pdb 55 TNDPAIELVIVTTPSGL-HYEHTMACIQAGKHVVMEKP-MTATAEEGETLKRAADEKGVL 112 usage_00062.pdb 55 TNDPAIELVIVTTPSGL-HYEHTMACIQAGKHVVMEKP-MTATAEEGETLKRAADEKGVL 112 usage_00064.pdb 55 TNDPAIELVIVTTPSGL-HYEHTMACIQAGKHVVMEKP-MTATAEEGETLKRAADEKGVL 112 usage_00185.pdb 54 YSL-DVDIFAPCALGGILNSHTIPF--LQASIIAGAANNQLE---NEQLHSQMLAKKGIL 107 lv p h agkhvv kp t e a L usage_00004.pdb 112 LSV 114 usage_00005.pdb 112 LSV 114 usage_00061.pdb 113 LSV 115 usage_00062.pdb 113 LSV 115 usage_00064.pdb 113 LSV 115 usage_00185.pdb 108 YSP 110 lSv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################