################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:56 2021 # Report_file: c_0296_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00011.pdb # 2: usage_00100.pdb # 3: usage_00253.pdb # 4: usage_00254.pdb # 5: usage_00269.pdb # 6: usage_00281.pdb # 7: usage_00282.pdb # # Length: 142 # Identity: 46/142 ( 32.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/142 ( 51.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/142 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF 58 usage_00100.pdb 1 --VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF 58 usage_00253.pdb 1 --KRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAF 58 usage_00254.pdb 1 --KRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAF 58 usage_00269.pdb 1 --IHILITGAAGQIGYALTFRIAKGDLCG-DRKVVLHLLEIPFGMKALEGCVMELQDCAF 57 usage_00281.pdb 1 --IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 58 usage_00282.pdb 1 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY 60 vtGAAGqI y Llf ia G G Dqp L LL a Gv MEL Dca usage_00011.pdb 59 PLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKK 118 usage_00100.pdb 59 PLLAGLEATDDPKVAFKDADYALLVGAAP---------LLQVNGKIFTEQGRALAEVAKK 109 usage_00253.pdb 59 PLLAGVVITDDPKVAFKDADVALLVGARPRS--MERKDLLSANAEIFTVQGAALNEVASR 116 usage_00254.pdb 59 PLLAGVVITDDPKVAFKDADVALLVGARPRS--MERKDLLSANAEIFTVQGAALNEVASR 116 usage_00269.pdb 58 PNVAGIVWTDKVEEAFKGVDVAFLVGSFPRKDGMDRSDLLAKNGGIFTVQGKALNDYAKP 117 usage_00281.pdb 59 PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 118 usage_00282.pdb 61 PLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASK 120 Pll td aFkd D A LvG P LL N IF QG AL A usage_00011.pdb 119 DVKVLVVGNPANTNALIAYKNA 140 usage_00100.pdb 110 DVKVLVVGNPANTNALIAYKNA 131 usage_00253.pdb 117 DVKVLVVGNPANTNAYIAMKSA 138 usage_00254.pdb 117 DVKVLVVGNPANTNAYIAMKSA 138 usage_00269.pdb 118 TVKVLVVGNPANTNCLIAQASA 139 usage_00281.pdb 119 SVKVIVVGNPANTNCLTASKSA 140 usage_00282.pdb 121 NVKVLVVGNPCNTNALICLKNA 142 VKVlVVGNPaNTN ia k A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################