################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:30:27 2021 # Report_file: c_1172_226.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00052.pdb # 2: usage_00065.pdb # 3: usage_00066.pdb # 4: usage_00067.pdb # 5: usage_00068.pdb # 6: usage_00306.pdb # 7: usage_00329.pdb # 8: usage_00330.pdb # 9: usage_00485.pdb # 10: usage_00528.pdb # 11: usage_00620.pdb # 12: usage_01103.pdb # 13: usage_01139.pdb # 14: usage_01599.pdb # 15: usage_01701.pdb # 16: usage_01844.pdb # 17: usage_01925.pdb # 18: usage_02655.pdb # 19: usage_02656.pdb # 20: usage_02864.pdb # 21: usage_02984.pdb # 22: usage_02985.pdb # 23: usage_03392.pdb # 24: usage_03393.pdb # 25: usage_03720.pdb # 26: usage_03896.pdb # 27: usage_04102.pdb # 28: usage_04666.pdb # 29: usage_04822.pdb # 30: usage_04893.pdb # 31: usage_04901.pdb # 32: usage_05069.pdb # # Length: 43 # Identity: 17/ 43 ( 39.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 43 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 43 ( 34.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 ---TTPPSVYPLAPGCGDT-TGSSVTLGCLVKGYFPESVTVTW 39 usage_00065.pdb 1 --KTTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 40 usage_00066.pdb 1 --KTTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 40 usage_00067.pdb 1 --KTTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 40 usage_00068.pdb 1 --KTTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 40 usage_00306.pdb 1 ---TTAPSVYPLAPVG-------SVTLGCLVKGYFPEPVTLTW 33 usage_00329.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_00330.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_00485.pdb 1 ---TTAPSVYPLVPVCGGT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_00528.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_00620.pdb 1 SAKTTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 42 usage_01103.pdb 1 ---TTAPSVYPLAPVC------SSVTLGCLVKGYFPEPVTLTW 34 usage_01139.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_01599.pdb 1 ---TTAPSVYPLAPVCGGT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_01701.pdb 1 ---TTAPSVYPLVPVCGGT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_01844.pdb 1 -------SVYPAAPGCGDT-TGSSVTLGCLVKGYFPESVTVTW 35 usage_01925.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_02655.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_02656.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_02864.pdb 1 ---TTAPSVYPLAPVC------SSVTLGCLVKGYFPEPVTLTW 34 usage_02984.pdb 1 -------SVFPLAPSSK-STSGGTAALGCLVKDYFPEPVTVSW 35 usage_02985.pdb 1 -------SVFPLAPSSK-STSGGTAALGCLVKDYFPEPVTVSW 35 usage_03392.pdb 1 ---TTAPSVYPLAPVC-----GSSVTLGCLVKGYFPEPVTLTW 35 usage_03393.pdb 1 ---TTAPSVYPLAPVC-----GSSVTLGCLVKGYFPEPVTLTW 35 usage_03720.pdb 1 ---TTAPSVYPLAPVC-----GSSVTLGCLVKGYFPEPVTLTW 35 usage_03896.pdb 1 ---TTAPSVYPLAPVCG---TGSSVTLGCLVKGYFPEPVTLTW 37 usage_04102.pdb 1 ---TTAPSVYPLAPVCG----GSSVTLGCLVKGYFPEPVTLTW 36 usage_04666.pdb 1 ---TTAPSVYPLAPVCG---TGSSVTLGCLVKGYFPEPVTLTW 37 usage_04822.pdb 1 ---TTAPSVYPLVPVCGGT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_04893.pdb 1 -----GPSVFPLAPSSKST-SGGTAALGCLVKDYFPEPVTVSW 37 usage_04901.pdb 1 ---TTAPSVYPLAPVCGDT-TGSSVTLGCLVKGYFPEPVTLTW 39 usage_05069.pdb 1 ---TTAPSVYPLAPV------GSSVTLGCLVKGYFPEPVTLTW 34 SV Pl P LGCLVK YFPE VT W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################