################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:37 2021 # Report_file: c_0895_42.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00050.pdb # 2: usage_00054.pdb # 3: usage_00059.pdb # 4: usage_00113.pdb # 5: usage_00129.pdb # 6: usage_00144.pdb # 7: usage_00295.pdb # # Length: 65 # Identity: 2/ 65 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 65 ( 10.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 65 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 SLVSFLTGLGCPNCIEYFTSQGLQSIYHLQ--NLTIEDLGA-LKI-PEQYRMTIWRGLQD 56 usage_00054.pdb 1 ---EWLPSLGLPQYRSYFMECLV-DARMLD--HLTKKDLRVHLKMVDSFHRTSLQYGIMC 54 usage_00059.pdb 1 -VSDWLISIGLPMYAGTLSTAGFSTLSQVP--SLSHTCLQE-AGITEERHIRKLLSAARL 56 usage_00113.pdb 1 -IQEFLERIHLQEYTSTLLLNGYETLDDLK--DIKESHLIE-LNIADPEDRARLLSAAES 56 usage_00129.pdb 1 TVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLLE-IGILNSGHRQRILQAIQL 59 usage_00144.pdb 1 DIKDFLMSINLEQYLLHFHESGFTTVKDCA--AINDSLLQK-IGISPTGHRRRILKQLQI 57 usage_00295.pdb 1 --GQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLE-IGILNSGHRQRILQAIQL 57 L l y g L i r usage_00050.pdb 57 L---- 57 usage_00054.pdb 55 LKRLN 59 usage_00059.pdb 57 F---- 57 usage_00113.pdb 57 L---- 57 usage_00129.pdb 60 L---- 60 usage_00144.pdb 58 ILSKM 62 usage_00295.pdb 58 L---- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################