################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:50:13 2021 # Report_file: c_1281_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00061.pdb # 2: usage_00138.pdb # 3: usage_00139.pdb # 4: usage_00166.pdb # 5: usage_00269.pdb # 6: usage_00319.pdb # 7: usage_00673.pdb # 8: usage_00877.pdb # # Length: 77 # Identity: 7/ 77 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 77 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 77 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 ----VISVKITN--PQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENI 54 usage_00138.pdb 1 GLIAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI 58 usage_00139.pdb 1 --IAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI 56 usage_00166.pdb 1 GLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKA 60 usage_00269.pdb 1 ---YVISVKITN--PQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENI 55 usage_00319.pdb 1 ----------------------DKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI 38 usage_00673.pdb 1 ----------------------DKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI 38 usage_00877.pdb 1 GLIAVVSVKVPD--PKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKI 58 KL v V lL L Np A v i usage_00061.pdb 55 SKVAQ------------ 59 usage_00138.pdb 59 IDAARAREAARRAREMT 75 usage_00139.pdb 57 IDAARAREAARRAREMT 73 usage_00166.pdb 61 IKARDAREAARKA---- 73 usage_00269.pdb 56 SKVAQKRIN-------- 64 usage_00319.pdb 39 IDAARAREAARRAREMT 55 usage_00673.pdb 39 IDAARAREAAR------ 49 usage_00877.pdb 59 IDAARAREAARRARE-- 73 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################