################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:32 2021 # Report_file: c_0870_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00053.pdb # 4: usage_00353.pdb # 5: usage_00388.pdb # 6: usage_00389.pdb # 7: usage_00399.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 75 ( 2.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 75 ( 41.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 SIYQDQEQRILKFLEELG---EGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA- 56 usage_00020.pdb 1 ---QDQEQRILKFLEELG---EGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA- 53 usage_00053.pdb 1 --YQDQEQRILKFLEELG---EGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA- 54 usage_00353.pdb 1 -----NAEIVCEAIKTIG----IEGATAAQLTRQLNMEKREVNKALYDLQRSAMVYSSD- 50 usage_00388.pdb 1 -----IVTKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVN- 54 usage_00389.pdb 1 -REGHLEQRILQVLTEA-----GSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTS- 53 usage_00399.pdb 1 ----SHEARVFRSI--P----P-EGLAQSELMR-----LPSGKVGFSKAMSNKWIRVDKS 44 l l usage_00019.pdb 57 -G---TPPLW---KI 64 usage_00020.pdb 54 -G---TPPLW---KI 61 usage_00053.pdb 55 -G---TPPLW---KI 62 usage_00353.pdb 51 -D---IPPRW----- 56 usage_00388.pdb 55 -AGKGVPG--LW-RL 65 usage_00389.pdb 54 -P---AT-W--CL-- 59 usage_00399.pdb 45 AA---DGPRV---FR 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################