################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:39 2021 # Report_file: c_1330_68.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01088.pdb # 2: usage_01089.pdb # 3: usage_01090.pdb # 4: usage_01091.pdb # 5: usage_01092.pdb # 6: usage_01093.pdb # # Length: 59 # Identity: 43/ 59 ( 72.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 59 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01088.pdb 1 PEVVLAKEAGICYASIAMATDYDCWK-----V--LKTLKENANKAKSLLLT-------- 44 usage_01089.pdb 1 PEVVLAKEAGICYASIAMATDYDCWKESVDRV--LKTLKENANKAKSLLLTTIPQIGST 57 usage_01090.pdb 1 PEVVLAKEAGICYASIAMATDYDCWK-----V--LKTLKENANKAKSLLLT-------- 44 usage_01091.pdb 1 PEVVLAKEAGICYASIAMATDYDCWK-----V--LKTLKENANKAKSLLLTTIPQIGST 52 usage_01092.pdb 1 PEVVLAKEAGICYASIAMATDYDCWK------EHLKTLKENANKAKSLLLTTIPQIGST 53 usage_01093.pdb 1 PEVVLAKEAGICYASIAMATDYDCWK--VDRV--LKTLKENANKAKSLLLT-------- 47 PEVVLAKEAGICYASIAMATDYDCWK LKTLKENANKAKSLLLT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################