################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:23 2021 # Report_file: c_0981_18.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00019.pdb # 2: usage_00022.pdb # 3: usage_00046.pdb # 4: usage_00117.pdb # 5: usage_00120.pdb # 6: usage_00121.pdb # 7: usage_00122.pdb # 8: usage_00123.pdb # 9: usage_00336.pdb # # Length: 53 # Identity: 7/ 53 ( 13.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 53 ( 62.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 53 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --AYQKQQDTLIVWSEG-DNFDLALSFQEKAGCDEIWEKICQVQ--------- 41 usage_00022.pdb 1 --TFTKTSQKFGQWADSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLARE- 50 usage_00046.pdb 1 --TFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAAR----- 46 usage_00117.pdb 1 NMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEK 53 usage_00120.pdb 1 --TFTKTSQKFGQWADSRANTVFGLGFSSELQLTKFAEKFQEVREAAR----- 46 usage_00121.pdb 1 --TFTKTSQKFGQWADSRANTVFGLGFSSELQLTKFAEKFQEVREAA------ 45 usage_00122.pdb 1 --TFTKTSQKFGQWADSRANTVFGLGFSSELQLTKFAEKFQEVREAAR----- 46 usage_00123.pdb 1 --TFTKTSQKFGQWADSRANTVFGLGFSSELQLTKFAEKFQEVREAAR----- 46 usage_00336.pdb 1 --TFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEA------- 44 tftKtsqkfgqWads aNtv gLgF se l faEKfqe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################