################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:45 2021 # Report_file: c_1079_95.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00133.pdb # 2: usage_00361.pdb # 3: usage_00362.pdb # 4: usage_00369.pdb # 5: usage_00370.pdb # 6: usage_00385.pdb # 7: usage_00386.pdb # 8: usage_00630.pdb # # Length: 67 # Identity: 5/ 67 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 67 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 67 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 -SFQAQAMVDIVKALGWNY--VSTLASEGSYGEKGVESFTQISKEAGGLC---------I 48 usage_00361.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 usage_00362.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 usage_00369.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 usage_00370.pdb 1 ----LNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 47 usage_00385.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 usage_00386.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 usage_00630.pdb 1 FGNLLNDVVAFAKANGLSGKDV-LVSGH-----SLGGLAVNSMADLS---GGKWGGFFAD 51 lndvVafaKAnGlsg V lvsgh slgglavnsmadls d usage_00133.pdb 49 AQSVRIP 55 usage_00361.pdb 52 SNYIAYA 58 usage_00362.pdb 52 SNYIAYA 58 usage_00369.pdb 52 SNYIAYA 58 usage_00370.pdb 48 SNYIAYA 54 usage_00385.pdb 52 SNYIAYA 58 usage_00386.pdb 52 SNYIAYA 58 usage_00630.pdb 52 SNYIAYA 58 snyiaya #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################