################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:38 2021 # Report_file: c_0008_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00009.pdb # 4: usage_00077.pdb # 5: usage_00080.pdb # 6: usage_00099.pdb # 7: usage_00100.pdb # 8: usage_00117.pdb # 9: usage_00118.pdb # # Length: 290 # Identity: 42/290 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/290 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/290 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRV 60 usage_00006.pdb 1 GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRV 60 usage_00009.pdb 1 GSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAV 60 usage_00077.pdb 1 GIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFT 60 usage_00080.pdb 1 GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRV 60 usage_00099.pdb 1 GSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQT 60 usage_00100.pdb 1 GSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQT 60 usage_00117.pdb 1 GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRV 60 usage_00118.pdb 1 GSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRV 60 Gs val TP G d L l h Gt aIvavGtTGEsAtL Eh V usage_00005.pdb 61 VDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIA 120 usage_00006.pdb 61 VDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIA 120 usage_00009.pdb 61 VKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIA 120 usage_00077.pdb 61 LKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVV-LPISYWKLNEAEVFQHYRAVG 119 usage_00080.pdb 61 VDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIA 120 usage_00099.pdb 61 VKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVA 120 usage_00100.pdb 61 VKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVA 120 usage_00117.pdb 61 VDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIA 120 usage_00118.pdb 61 VDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIA 120 v R PvI g gan T ea l a G a l v pyYnKp g H a usage_00005.pdb 121 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-N--IIGIKEATGDLQRAKEVIERVGKD 177 usage_00006.pdb 121 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-N--IIGIKEATGDLQRAKEVIERVGKD 177 usage_00009.pdb 121 EATSIPMIIYNVPGRTVVSMTNDTILRLAEIP-N--IVGVKEASGNIGSNIELINRAPEG 177 usage_00077.pdb 120 EAIGVPVLYNNP-GTSGID-SVELILRIVREVDNVT---VKESTGDIQR-HKLRLLGEGR 173 usage_00080.pdb 121 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-N--IIGIKEATGDLQRAKEVIERVGKD 177 usage_00099.pdb 121 ASTDIPQILYNVPGRTAVDMLPETIAQLVEVP-N--IIGVKDATGDVARVKQLRDLCGND 177 usage_00100.pdb 121 ASTDIPQILYNVPGRTAVDMLPETIAQLVEVP-N--IIGVKDATGDVARVKQLRDLCGND 177 usage_00117.pdb 121 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-N--IIGIKEATGDLQRAKEVIERVGKD 177 usage_00118.pdb 121 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-N--IIGIKEATGDLQRAKEVIERVGKD 177 iP i yNv Grt d et l p N K atGd r usage_00005.pdb 178 FLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH 237 usage_00006.pdb 178 FLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH 237 usage_00009.pdb 178 FVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMCRAALQGDIALARELNDRLIPIY 237 usage_00077.pdb 174 VPFYNG-NPLALEAFVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEKARALFYRQLPLL 232 usage_00080.pdb 178 FLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH 237 usage_00099.pdb 178 FLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIKGLF 237 usage_00100.pdb 178 FLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIKGLF 237 usage_00117.pdb 178 FLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH 237 usage_00118.pdb 178 FLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH 237 f ysG d tA e Gg G isv N P c Aa GD A a d l usage_00005.pdb 238 KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPHCHDPLRQAMRQTG- 286 usage_00006.pdb 238 KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPHCHDPLRQAMRQTG- 286 usage_00009.pdb 238 DTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTENGQAKVRAALKASG- 286 usage_00077.pdb 233 DFILRRGLPTTIKAGLGLSGLEVGAPRLPVQALDTEGCRYLQGLLEELR- 281 usage_00080.pdb 238 KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPHCHDPLRQAMRQTG- 286 usage_00099.pdb 238 SALFCEANPIPVKWAAHKMGLISQGDIRLPLTELSTEFHGLLLDAMKNAR 287 usage_00100.pdb 238 SALFCEANPIPVKWAAHKMGLISQGDIRLPLTELSTEFHGLLLDAMKNAR 287 usage_00117.pdb 238 KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPHCHDPLRQAMRQTG- 286 usage_00118.pdb 238 KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPRCHEPLRQAMRQTG- 286 f e P Kwa Gl l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################