################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:29 2021 # Report_file: c_0699_99.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00373.pdb # 2: usage_00704.pdb # 3: usage_01404.pdb # 4: usage_01746.pdb # # Length: 89 # Identity: 3/ 89 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 89 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 89 ( 58.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00373.pdb 1 -LKVTVGTANGKPGDTVTVPVTFADVAKM-KN-----------VGTCN-------FYLGY 40 usage_00704.pdb 1 -GPVYCFT-------PSPVVVGT-T---D---RSGAPTYSWGANDTDVFVLNNNWFGCTW 45 usage_01404.pdb 1 MLQVDIGSTSGKAGSVVSVPITFTNV--PKSG-----------IYALS-------FRTNF 40 usage_01746.pdb 1 MLQVDIGSTSGKAGSVVSVPITFTNV--PKSG-----------IYALS-------FRTNF 40 l V g v Vp tf F usage_00373.pdb 41 DASLLEV-VSVDAGPIVKNAAVNFSSSAS 68 usage_00704.pdb 46 MNS----TGFTKVCG-------------- 56 usage_01404.pdb 41 DPQKVTV-ASIDAGSLIENASDFTTY-YN 67 usage_01746.pdb 41 DPQKVTV-ASIDAGSLIENASDFTTY-YN 67 d s dag #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################