################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:24 2021 # Report_file: c_0337_17.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00039.pdb # 2: usage_00059.pdb # 3: usage_00065.pdb # 4: usage_00120.pdb # 5: usage_00131.pdb # 6: usage_00161.pdb # # Length: 108 # Identity: 8/108 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/108 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/108 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 ----PV--RFQEALKDLEVLEGGAATLRCVLSSV--AA-PVKWCYG----NNVLRPG--D 45 usage_00059.pdb 1 ----AP--DITGHKRSENKNEGQDAMMYCKSVG-YPHP-EWMWRKKENGVFEEISNS-SG 51 usage_00065.pdb 1 SRGIPP--KIEALPSDISIDEGKVLTVACAFTG-EPTP-EVTWSCG----GRKIHSQEQG 52 usage_00120.pdb 1 ----PP--KIEALPSDISIDEGKVLTVACAFTG-EPTP-EVTWSCG----GRKIHSQEQG 48 usage_00131.pdb 1 ------PPRVKAVKSSEHINEGETAMLVCKSES-VPPVTDWAWYKITDSEDKALMNGSES 53 usage_00161.pdb 1 ----PP--KIEALPSDISIDEGKVLTVACAFTG-EPTP-EVTWSCG----GRKIHSQEQG 48 EG C W usage_00039.pdb 46 KYSLRQEGAMLELVVRNLRPQ-DSGRYSCSF--G--DQTTSATLTVT- 87 usage_00059.pdb 52 RFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 99 usage_00065.pdb 53 RFHIENTDDLTTLIIMDVQKQ-DGGLYTLSLGNEFGSDSATVNIHIR- 98 usage_00120.pdb 49 RFHIENTDDLTTLIIMDVQKQ-DGGLYTLSLGNEFGSDSATVNIHIRS 95 usage_00131.pdb 54 RFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR- 100 usage_00161.pdb 49 RFHIENTDDLTTLIIMDVQKQ-DGGLYTLSLGNEFGSDSATVNIHI-- 93 rf L i D G Y s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################