################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:28 2021 # Report_file: c_0932_76.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00223.pdb # 2: usage_01585.pdb # 3: usage_01586.pdb # 4: usage_01587.pdb # 5: usage_01698.pdb # 6: usage_01699.pdb # 7: usage_02252.pdb # 8: usage_02253.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 47 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 47 ( 48.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 -EAQLDDKGNASFKEYQTGPFALKEILE---HQRIYGK--------- 34 usage_01585.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELGTSSKRYYK 37 usage_01586.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELGTSSKRYYK 37 usage_01587.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELGTSSKRYYK 37 usage_01698.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELGTSSKRYYK 37 usage_01699.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELGTSSKRYYK 37 usage_02252.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELK--RYYK-- 33 usage_02253.pdb 1 VALTAQNY-R---------VFSVHYSQFHGLSYSLSELK--RYYK-- 33 altaqny r vFsvhysqf syslsel #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################