################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:41 2021 # Report_file: c_0342_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00051.pdb # 4: usage_00052.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00113.pdb # 10: usage_00114.pdb # # Length: 113 # Identity: 87/113 ( 77.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/113 ( 77.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/113 ( 8.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 GVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIK 60 usage_00021.pdb 1 GVVKTILRKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIK 60 usage_00051.pdb 1 GVVKTILRKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIK 60 usage_00052.pdb 1 -------RKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIK 53 usage_00064.pdb 1 -------KKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIK 53 usage_00065.pdb 1 GVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIK 60 usage_00066.pdb 1 GVVKTILRKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIK 60 usage_00067.pdb 1 GVVKTILRKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIK 60 usage_00113.pdb 1 -------KKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIK 53 usage_00114.pdb 1 -------KKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIK 53 KG GEEN PKKGNEVTVHYVGKLES GKVFDSS RNVPFKFHL QGEVIK usage_00020.pdb 61 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE-- 111 usage_00021.pdb 61 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISFRE-- 111 usage_00051.pdb 61 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISFRE-- 111 usage_00052.pdb 54 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISFRE-- 104 usage_00064.pdb 54 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFREL- 105 usage_00065.pdb 61 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRELE 113 usage_00066.pdb 61 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISFRE-- 111 usage_00067.pdb 61 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISFRE-- 111 usage_00113.pdb 54 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRELE 106 usage_00114.pdb 54 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE-- 104 GWDICV SM KNEKC VR S YGYG EGCGESIPGNSVL FEIEL SFRE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################