################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:34:10 2021 # Report_file: c_1156_94.html ################################################################################################ #==================================== # Aligned_structures: 53 # 1: usage_00054.pdb # 2: usage_00055.pdb # 3: usage_00362.pdb # 4: usage_00369.pdb # 5: usage_00371.pdb # 6: usage_00372.pdb # 7: usage_00392.pdb # 8: usage_00409.pdb # 9: usage_00535.pdb # 10: usage_00536.pdb # 11: usage_00537.pdb # 12: usage_00538.pdb # 13: usage_00539.pdb # 14: usage_00640.pdb # 15: usage_00641.pdb # 16: usage_00642.pdb # 17: usage_00643.pdb # 18: usage_00644.pdb # 19: usage_00645.pdb # 20: usage_00671.pdb # 21: usage_00674.pdb # 22: usage_00675.pdb # 23: usage_00720.pdb # 24: usage_00721.pdb # 25: usage_00722.pdb # 26: usage_00856.pdb # 27: usage_00857.pdb # 28: usage_00861.pdb # 29: usage_00865.pdb # 30: usage_00879.pdb # 31: usage_00880.pdb # 32: usage_00881.pdb # 33: usage_00890.pdb # 34: usage_00913.pdb # 35: usage_00933.pdb # 36: usage_00934.pdb # 37: usage_00970.pdb # 38: usage_00971.pdb # 39: usage_00981.pdb # 40: usage_00982.pdb # 41: usage_00983.pdb # 42: usage_00986.pdb # 43: usage_00987.pdb # 44: usage_00988.pdb # 45: usage_00989.pdb # 46: usage_01090.pdb # 47: usage_01107.pdb # 48: usage_01108.pdb # 49: usage_01111.pdb # 50: usage_01112.pdb # 51: usage_01113.pdb # 52: usage_01170.pdb # 53: usage_01179.pdb # # Length: 27 # Identity: 19/ 27 ( 70.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 27 ( 74.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 27 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 AYIKIP---QMQPVKAFKIHNKIWVIP 24 usage_00055.pdb 1 AYIKIP---QMQPVKAFKIHNKIWVIP 24 usage_00362.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00369.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00371.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00372.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00392.pdb 1 -YIKIPNVGQMQPVKAFKIHNKIWVIP 26 usage_00409.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00535.pdb 1 -YIKIP---QMQPVKAFKIHNKIWVIP 23 usage_00536.pdb 1 AYIKIPG--QMQPVKAFKIHNKIWVIP 25 usage_00537.pdb 1 -YIKIP----MQPVKAFKIHNKIWVIP 22 usage_00538.pdb 1 -YIKIPN--QMQPVKAFKIHNKIWVIP 24 usage_00539.pdb 1 -YIKIPN---MQPVKAFKIHNKIWVIP 23 usage_00640.pdb 1 --IKIPNAGQMQPVKAFKIHNKIWVIP 25 usage_00641.pdb 1 --IKIPNAGQMQPVKAFKIHNKIWVIP 25 usage_00642.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00643.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00644.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00645.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00671.pdb 1 --IKIPNVGQMQPVKAFKIHNKIWVIP 25 usage_00674.pdb 1 AYIKIPNVGQMQPVKAFKIHNKIWVIP 27 usage_00675.pdb 1 AYIKIPNVGQMQPVKAFKIHNKIWVIP 27 usage_00720.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00721.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00722.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00856.pdb 1 -YIKIP---QMQPVKAFKIHNKIWVIP 23 usage_00857.pdb 1 -YIKIPNVGQMQPVKAFKIHNKIWVIP 26 usage_00861.pdb 1 -YIKIPNVGQMQPVKAFKIHNKIWVIP 26 usage_00865.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00879.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00880.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00881.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00890.pdb 1 AYIKIPN--QMQPVKAFKIHNKIWVIP 25 usage_00913.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00933.pdb 1 --IKIPNA--MQPVKAFKIHNKIWVIP 23 usage_00934.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00970.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00971.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00981.pdb 1 -YIK-IPNGQMQPVKAFKIHNKIWVIP 25 usage_00982.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00983.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00986.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00987.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_00988.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_00989.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_01090.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_01107.pdb 1 -YIKIP---QMQPVKAFKIHNKIWVIP 23 usage_01108.pdb 1 -YIKIPNVGQMQPVKAFKIHNKIWVIP 26 usage_01111.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_01112.pdb 1 -YIKIPNAGQMQPVKAFKIHNKIWVIP 26 usage_01113.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_01170.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 usage_01179.pdb 1 AYIKIPNAGQMQPVKAFKIHNKIWVIP 27 IK p MQPVKAFKIHNKIWVIP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################