################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:50 2021 # Report_file: c_0070_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00304.pdb # 6: usage_00305.pdb # # Length: 229 # Identity: 55/229 ( 24.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 167/229 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/229 ( 3.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS 60 usage_00031.pdb 1 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS 60 usage_00032.pdb 1 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS 60 usage_00033.pdb 1 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS 60 usage_00304.pdb 1 RVALVTGAGGGIGRGVARSFGNEGAAVIIAEINESTGRQVEQEIREMGGRSLFVKTDVTS 60 usage_00305.pdb 1 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD 60 rtALVTGs rGlGra Aegla aGAr in s aq vqe r G da VafDVTs usage_00030.pdb 61 ESEIIEAFARLDEQGIDVDILVNN-AGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA 119 usage_00031.pdb 61 ESEIIEAFARLDEQGIDVDILVNN-AGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA 119 usage_00032.pdb 61 ESEIIEAFARLDEQGIDVDILVNN-AGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA 119 usage_00033.pdb 61 ESEIIEAFARLDEQGIDVDILVNN-AGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA 119 usage_00304.pdb 61 KASIEAAVRSAVEQFGSLDILVNNAFVPTPNVLLEEKTDEMLEQTLTTSLWATWWAMRAA 120 usage_00305.pdb 61 ELAIEAAFSKLDAEGIHVDILINN-AGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSA 119 e I Af ldeqgi vDILvNN agiq rkpm Ele wq vidTnLtsaf R A usage_00030.pdb 120 AKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 178 usage_00031.pdb 120 AKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 178 usage_00032.pdb 120 AKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 178 usage_00033.pdb 120 AKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 178 usage_00304.pdb 121 FVPMRERR-WGRIVNFYSIDTETGAWLHGDYNTAKAGIVGLTRSAASEWGRFNITVNAIA 179 usage_00305.pdb 120 AKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 179 akrMi R GkIvNigSltse ar tvapYt AKgGIkmLTr mAaEWaq Iq NAIg usage_00030.pdb 179 PGYMLTDMNQALID-NPEFDAWVKARTPAKRWGKP--QELVGTAVFLS- 223 usage_00031.pdb 179 PGYMLTDMNQALID-NPEFDAWVKARTPAKRWGKP--QELVGTAVFLS- 223 usage_00032.pdb 179 PGYMLTDMNQALID-NPEFDAWVKARTPAKRWGKP--QELVGTAVFLS- 223 usage_00033.pdb 179 PGYMLTDMNQALID-NPEFDAWVKARTPAKRWGKP--QELVGTAVFLSA 224 usage_00304.pdb 180 PT-AMGATFFELAAKNPEFAERSAAARPLGRSGD-PEQDIGPAAVFFA- 225 usage_00305.pdb 180 PGYILTDMNTALIE-DKQFDSWVKSSTPSQRWGRP--EELIGTAIFLS- 224 Pg ltdmn aLi npeFd wvka tP RwG qel gtAvFls #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################