################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:22 2021 # Report_file: c_0841_28.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00035.pdb # 3: usage_00076.pdb # 4: usage_00107.pdb # 5: usage_00108.pdb # 6: usage_00109.pdb # 7: usage_00110.pdb # 8: usage_00111.pdb # 9: usage_00173.pdb # 10: usage_00189.pdb # 11: usage_00202.pdb # # Length: 66 # Identity: 9/ 66 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 66 ( 19.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 66 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PTRFAYERCVAALEGGTRAFAFASGMAATSTVMEL-LDAGSHVVAMDDLYGGTFRLFER 58 usage_00035.pdb 1 NPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKV 60 usage_00076.pdb 1 -PTRFALEELIADLEGGVKGFAFASGLAGIHAVFSL-LQSGDHVLLGDDVYGGTFRLFN- 57 usage_00107.pdb 1 -PTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET 59 usage_00108.pdb 1 -PTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET 59 usage_00109.pdb 1 -PTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET 59 usage_00110.pdb 1 -PTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET 59 usage_00111.pdb 1 -PTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET 59 usage_00173.pdb 1 -PTSDVLGQRLANVEGGAFGIPVASG-AACFYALINLASSGDNVAYSNKIYGGTQTLISH 58 usage_00189.pdb 1 -PTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFL-- 57 usage_00202.pdb 1 -PTSTEVENKLALLEGGEAAVVAASGMGAIAASLWSALKSGDHVVASDTLYGCTFALLNH 59 PT e lEg ASG a G Y T usage_00001.pdb 59 VR---- 60 usage_00035.pdb 61 TL---- 62 usage_00076.pdb ------ usage_00107.pdb 60 IL---- 61 usage_00108.pdb 60 IL---- 61 usage_00109.pdb 60 ILPKMG 65 usage_00110.pdb 60 ILPKMG 65 usage_00111.pdb 60 IL---- 61 usage_00173.pdb 59 TL---- 60 usage_00189.pdb ------ usage_00202.pdb 60 GL---- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################