################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:03 2021 # Report_file: c_0390_19.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00030.pdb # 2: usage_00196.pdb # 3: usage_00198.pdb # 4: usage_00199.pdb # 5: usage_00200.pdb # 6: usage_00201.pdb # 7: usage_00202.pdb # 8: usage_00277.pdb # # Length: 102 # Identity: 5/102 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/102 ( 14.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/102 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 DNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKR-DIPA---AAWENNNIFDWR-- 54 usage_00196.pdb 1 --VSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRP-LG--V--TTWIQTVV-P-D-- 49 usage_00198.pdb 1 --VGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP-FG--E--KEWRRVTVTNPE-- 51 usage_00199.pdb 1 --VGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP-FG--E--KEWRRVTVTNPE-- 51 usage_00200.pdb 1 --VGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP-FG--E--KEWRRVTVTNPE-- 51 usage_00201.pdb 1 --INGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRP-VG--T--TAWMKERVALVE-- 51 usage_00202.pdb 1 --LSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRR-QG--S--SSWQTARVPGAD-- 51 usage_00277.pdb 1 --LEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQV---GGQEQVREEVSWDTENS 55 g g l I W p f y v w usage_00030.pdb 55 QNNIVIAD--QPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 94 usage_00196.pdb 50 NPRYVFRNESIVPFSPYEVKVGVYNNKGEG-P---------- 80 usage_00198.pdb 52 IGRYVHKDESMPPSTQYQVKVKAFNSKGDG-PFSLTAVIY-- 90 usage_00199.pdb 52 IGRYVHKDESMPPSTQYQVKVKAFNSKGDG-PFSLTAVIY-- 90 usage_00200.pdb 52 IGRYVHKDESMPPSTQYQVKVKAFNSKGDG-PFSLTAVI--- 89 usage_00201.pdb 52 SSKFIYRNESIMPLSPFEVKVGVYNNEGEG-SLSTVTIVY-- 90 usage_00202.pdb 52 TQYFVYSNDSIHPYTPFEVKIRSYNRRGDG-PESLTAIVY-- 90 usage_00277.pdb 56 HPQHTITN--LSPYTNVSVKLILMNPEGRK-ESQELIV-Q-- 91 p vK N G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################