################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:12 2021 # Report_file: c_1102_1.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00014.pdb # 2: usage_00052.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_00072.pdb # 6: usage_00074.pdb # 7: usage_00077.pdb # 8: usage_00116.pdb # 9: usage_00119.pdb # 10: usage_00122.pdb # 11: usage_00161.pdb # 12: usage_00163.pdb # 13: usage_00165.pdb # 14: usage_00167.pdb # 15: usage_00169.pdb # 16: usage_00171.pdb # 17: usage_00173.pdb # 18: usage_00175.pdb # 19: usage_00177.pdb # # Length: 107 # Identity: 20/107 ( 18.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/107 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/107 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 TAGHGLLVELIITFQLVFTIFASCD--SKRT-D--VTGSVALAIGFSVAIGHLFAINYT- 54 usage_00052.pdb 1 TAGQAVTVELFLTLQLVLCIFASTD--ERRG-E--NPGTPALSIGFSVALGHLLGIHYT- 54 usage_00054.pdb 1 TAGQAVTVELFLTLQLVLCIFASTD--ERRG-E--NPGTPALSIGFSVALGHLLGIHYT- 54 usage_00055.pdb 1 TAGQAVTVELFLTLQLVLCIFASTD--ERRG-ENPG-T-PALSIGFSVALGHLLGIHYT- 54 usage_00072.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00074.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00077.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00116.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-S--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00119.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-S--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00122.pdb 1 -SIEGVVMEIIITFALVYTVYATAA-DPKKG-S--LGTIAPLAIGLIVGANILAAGPFS- 54 usage_00161.pdb 1 -SGQGLGIEIIGTLQLVLCVLATTDR-RR-RDL--GGS-APLAIGLSVALGHLLAIDYTG 54 usage_00163.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00165.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00167.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00169.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00171.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00173.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00175.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 usage_00177.pdb 1 TQGQAMVVELILTFQLALCIFASTD--SRRT-E--PVGSPALSIGLSVTLGHLVGIYFT- 54 g E T qL A d L IG sV ghL i t usage_00014.pdb 55 GASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCP 100 usage_00052.pdb 55 GCSMNPARSLAPAVVTGKFD-DHWVFWIGPLVGAILGSLLY------ 94 usage_00054.pdb 55 GCSMNPARSLAPAVVTGKFD-DHWVFWIGPLVGAILGSLLYNYV--- 97 usage_00055.pdb 55 GCSMNPARSLAPAVVTGKFD-DHWVFWIGPLVGAILGSLLYNYV--- 97 usage_00072.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00074.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVG------------------ 83 usage_00077.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00116.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00119.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00122.pdb 55 GGSMNPARSFGPAVAAGDFS-GHWVYWVGPLIGGGLAGLI------- 93 usage_00161.pdb 55 -CGINPARSFGSAVITHNFS-NHWIFWVGPFIGGALAVLIYDF---- 95 usage_00163.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLF- 100 usage_00165.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00167.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLL-- 99 usage_00169.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVG------------------ 83 usage_00171.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYL--- 98 usage_00173.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLF- 100 usage_00175.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLF- 100 usage_00177.pdb 55 GCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLF- 100 smNPARS pAV f HW W G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################