################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:42 2021 # Report_file: c_0238_10.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00012.pdb # 4: usage_00059.pdb # 5: usage_00105.pdb # 6: usage_00106.pdb # 7: usage_00107.pdb # # Length: 143 # Identity: 39/143 ( 27.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/143 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/143 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 TIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSG 60 usage_00009.pdb 1 TIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSG 60 usage_00012.pdb 1 TIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSG 60 usage_00059.pdb 1 GIRQFYINV-E-EWKLDTLCDLYET-T-IQAVIFINTRRKVDWLTEKMHARDFTVSAMH- 55 usage_00105.pdb 1 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAM-- 58 usage_00106.pdb 1 --RQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSG 58 usage_00107.pdb 1 --RQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSG 58 Q Y K LC Y T QA IF TR WL V usage_00008.pdb 61 EMMVEQRAAVIERFREGKEK---VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET 117 usage_00009.pdb 61 EMMVEQRAAVIERFREGKEK---VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET 117 usage_00012.pdb 61 EMMVEQRAAVIERFREGKEK---VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET 117 usage_00059.pdb 56 ---QKERDVIMREFR-GSSR---VLITTDLLARGIDVQQVSLVINYDLPT------NREN 102 usage_00105.pdb 59 --MDQKERDVIMREF-----RSGVLITTDLLA--IDVQQVSLVINYDLPT------NREN 103 usage_00106.pdb 59 ELTVEQRASIIQRFRDGKEK---VLITTNVCARGIDVKQVTIVVNFDLPV--GEEPDYET 113 usage_00107.pdb 59 ELTVEQRASIIQRFRDGKEK---VLITTNVCARGIDVKQVTIVVNFDLPV--GEEPDYET 113 r i rfr VL TT A IDV QV V N DLP E usage_00008.pdb 118 YLHRIGR----GKRGLAVNMVDS 136 usage_00009.pdb 118 YLHRIGR----GKRGLAVNMVDS 136 usage_00012.pdb 118 YLHRIGRTGRFGKRGLAVNMVDS 140 usage_00059.pdb 103 YIHRI---------GVAINMVT- 115 usage_00105.pdb 104 YIHRIGR-------GVAINM--- 116 usage_00106.pdb 114 YLHRIGR---T-KKGLAFNM--- 129 usage_00107.pdb 114 YLHRIGR---T--KGLAFN---- 127 Y HRI G A N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################