################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:15 2021 # Report_file: c_0513_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00107.pdb # 2: usage_00448.pdb # 3: usage_00449.pdb # 4: usage_00562.pdb # 5: usage_00670.pdb # 6: usage_00671.pdb # 7: usage_00674.pdb # 8: usage_00744.pdb # 9: usage_01007.pdb # # Length: 119 # Identity: 23/119 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/119 ( 80.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/119 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00448.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00449.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00562.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00670.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00671.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00674.pdb 1 -----QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST 55 usage_00744.pdb 1 -----QVGFDLVKACKEACAAANVLLSVIIETGELKDEALIRKASEISIKAGADHIVTST 55 usage_01007.pdb 1 VADGESRIRLLVSEVKKVVGP-K-TLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSS 58 qvgfdLVkacKeacaa n lLkViietGELkdealIrkAseisikaGADfi TSt usage_00107.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADEL-- 107 usage_00448.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFLPAGGV-RTAEDAQKYLAIADEL-- 107 usage_00449.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADELFG 109 usage_00562.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADE--- 106 usage_00670.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADEL-- 107 usage_00671.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADELF- 108 usage_00674.pdb 56 GKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGV-RTAEDAQKYLAIADEL-- 107 usage_00744.pdb 56 GKVAVGATPESARIMMEVIRDMGVEK----TVGFIPAGGV-RTAEEAQKYLAIADEL-- 107 usage_01007.pdb 59 GLGATHATMFTVHLISIALREYM---VRERCIGIKIEVG-DVHMAETADFLMQMIFE-- 111 GkvAv ATpesarimmeviRdmg tvGf pagG rtae aqkyLaiade #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################