################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:32 2021 # Report_file: c_1404_4.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00049.pdb # 2: usage_00050.pdb # 3: usage_00100.pdb # 4: usage_00154.pdb # 5: usage_00159.pdb # 6: usage_00202.pdb # 7: usage_00203.pdb # 8: usage_00204.pdb # 9: usage_00205.pdb # 10: usage_00343.pdb # 11: usage_00825.pdb # 12: usage_00826.pdb # # Length: 70 # Identity: 52/ 70 ( 74.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 70 ( 74.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 70 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00050.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00100.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00154.pdb 1 ---------TPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 51 usage_00159.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00202.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00203.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00204.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00205.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00343.pdb 1 --------ITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 52 usage_00825.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 usage_00826.pdb 1 IYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER 60 TPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAER usage_00049.pdb 61 RRNHESAGT- 69 usage_00050.pdb 61 RRNHESAGT- 69 usage_00100.pdb 61 RRNHESAGTL 70 usage_00154.pdb 52 RRNHESAG-- 59 usage_00159.pdb 61 RRN------- 63 usage_00202.pdb 61 RRN------- 63 usage_00203.pdb 61 RRN------- 63 usage_00204.pdb 61 RRN------- 63 usage_00205.pdb 61 R--------- 61 usage_00343.pdb 53 RRNHE----- 57 usage_00825.pdb 61 RR-------- 62 usage_00826.pdb 61 RR-------- 62 R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################