################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:03 2021 # Report_file: c_0840_104.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00152.pdb # 4: usage_00189.pdb # 5: usage_00289.pdb # 6: usage_00347.pdb # 7: usage_00348.pdb # 8: usage_00575.pdb # 9: usage_00654.pdb # 10: usage_00991.pdb # 11: usage_01081.pdb # # Length: 81 # Identity: 14/ 81 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 81 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 81 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -HQYREQIKRVK---DSDDVPMVLVGNK-CDL-AARTVESRQAQDLARSY-GIPYIETSA 53 usage_00016.pdb 1 -HQYREQIKRVK---DSDDVPMVLVGNK-CDL-AARTVESRQAQDLARSY-GIPYIETSA 53 usage_00152.pdb 1 -HHYREQIKRVK---DSEDVPMVLVGNK-CDL-PSRTVDTKQAQDLARSY-GIPFIETSA 53 usage_00189.pdb 1 ---MRDQIIRVK---RYEKVPVILVGNK-VDLESEREVSSSEGRALAEEW-GCPFMETSA 52 usage_00289.pdb 1 -HQYREQIKRVK---DSDDVPMVLVGNK-CDL-AARTVESRQAQDLARSY-GIPYIETSA 53 usage_00347.pdb 1 -HHYREQIKRVK---DSEDVPMVLVGNK-SDL-PSRTVDTKQAQDLARSY-GIPFIETSA 53 usage_00348.pdb 1 -HHYREQIKRVK---DSEDVPMVLVGNK-SDL-PSRTVDTKQAQDLARSY-GIPFIETSA 53 usage_00575.pdb 1 -QEFREQILRVK---NDESIPFLLVGNKC-------KVPLSECQLRAQQW-AVPYVETSA 48 usage_00654.pdb 1 LSNWKKEFIYYADVKEPESFPFVILGNK-TDI-KERQVSTEEAQAWCKDNGDYPYFETSA 58 usage_00991.pdb 1 ---MRDQIIRVK---RYEKVPVILVGNK-VDLESEREVSSSEGRALAEEW-GCPFMETSA 52 usage_01081.pdb 1 -HQYREQIKRVK---DSDDVPMVLVGNK-CDL-AARTVESRQAQDLARSY-GIPYIETSA 53 r qi rvk P lvGNK V a P ETSA usage_00015.pdb 54 KTRQGVEDAFYTLVREIRQH- 73 usage_00016.pdb 54 KTRQGVEDAFYTLVREIRQ-- 72 usage_00152.pdb 54 KTRQGVDDAFYTLVREIRKHK 74 usage_00189.pdb 53 KSKTMVDELFAEIVRQMNY-- 71 usage_00289.pdb 54 KTRQGVEDAFYTLVREIRQH- 73 usage_00347.pdb 54 KTRQGVDDAFYTLVREIRKHK 74 usage_00348.pdb 54 KTRQGVDDAFYTLVREIRKHK 74 usage_00575.pdb 49 KTRENVDKVFFDLMREIRSRK 69 usage_00654.pdb 59 KDSTNVAAAFEEAVRRIL--- 76 usage_00991.pdb 53 KSKTMVDELFAEIVRQMNY-- 71 usage_01081.pdb 54 KTRQGVEDAFYTLVREIRQH- 73 K V F vR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################