################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:46 2021 # Report_file: c_0364_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00025.pdb # 5: usage_00029.pdb # 6: usage_00030.pdb # 7: usage_00035.pdb # 8: usage_00056.pdb # 9: usage_00057.pdb # 10: usage_00063.pdb # # Length: 95 # Identity: 39/ 95 ( 41.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 95 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 95 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 DAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCE 60 usage_00008.pdb 1 DAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCE 60 usage_00009.pdb 1 DAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCE 60 usage_00025.pdb 1 DAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCE 60 usage_00029.pdb 1 DAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCE 60 usage_00030.pdb 1 -AALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCE 59 usage_00035.pdb 1 -ADLVVEILDLVQQASHYKQIKKGLNEVLKSMNRGLAEFVVLAADTQPLEILLSAPLVAE 59 usage_00056.pdb 1 -EELSLELLNLVKHGASLQAIKRGANEALKQVNRGKAELVIIAADADPIEIVLHLPLACE 59 usage_00057.pdb 1 -EELSLELLNLVKHGASLQAIKRGANEALKQVNRGKAELVIIAADADPIEIVLHLPLACE 59 usage_00063.pdb 1 DAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCE 60 L L V GaNEa K NRG E AAD P EI LhlPL cE usage_00001.pdb 61 DKNVPYVFVPSRVALGRACGVSRPVIAASIT---- 91 usage_00008.pdb 61 DKNVPYVFVRSKQALGRACGVSRPVIACSVTIKE- 94 usage_00009.pdb 61 DKNVPYVFVRSKQALGRACGVSRPVIACSVTIKE- 94 usage_00025.pdb 61 DKNVPYVFVPSRVALGRACGVSRPVIAASITTNDA 95 usage_00029.pdb 61 DKNVPYVFVPSRVALGRACGVSRPVIAASIT---- 91 usage_00030.pdb 60 DKNVPYVFVPSRVALGRACGVSRPVIAASIT---- 90 usage_00035.pdb 60 DKAVPYVFVPSKAALGRACGVSRPVIACAVLRAD- 93 usage_00056.pdb 60 DKGVPYVFIGSKNALGRACNVSVPTIVASIGK--- 91 usage_00057.pdb 60 DKGVPYVFIGSKNALGRACNVSVPTIVASIG---- 90 usage_00063.pdb 61 DKNVPYVFVRSKQALGRACGVSRPVIACSVTIKE- 94 DK VPYVF S ALGRAC VS P I s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################