################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:03 2021 # Report_file: c_1121_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00205.pdb # 2: usage_00545.pdb # 3: usage_00546.pdb # 4: usage_00547.pdb # 5: usage_00548.pdb # # Length: 147 # Identity: 10/147 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/147 ( 66.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/147 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00205.pdb 1 -RFQVIIICLVVLDALLVLAELLLDLK--VTAFHYMSFAILVFFMLDLGLRIFAYG---- 53 usage_00545.pdb 1 LGMRVFGVFLIFLDIILMIIDLSLP--GKSESSQSFYDGMALALSCYFMLDLGLRIFAYG 58 usage_00546.pdb 1 LGMRVFGVFLIFLDIILMIIDLSLP--GKSESSQSFYDGMALALSCYFMLDLGLRIFAYG 58 usage_00547.pdb 1 LGMRVFGVFLIFLDIILMIIDLSLP--GKSESSQSFYDGMALALSCYFMLDLGLRIFAYG 58 usage_00548.pdb 1 LGMRVFGVFLIFLDIILMIIDLSLP--GKSESSQSFYDGMALALSCYFMLDLGLRIFAYG 58 gmrVfgvfLifLDiiLmiidLsLp sessqsfydgmalalscyfmLdlglri usage_00205.pdb 54 -FTNPWEVADGLIVVVSFVLDLVLLFFEALGLLILLRLWRVA------------RIINGI 100 usage_00545.pdb 59 PKNFFT-NPWEVADGLIIVVTFVVTI------------FYTVLDEYVQETGADGLGRLVV 105 usage_00546.pdb 59 PKNFFT-NPWEVADGLIIVVTFVVTI------------FYTVLDEYVQETGADGLGRLVV 105 usage_00547.pdb 59 PKNFFT-NPWEVADGLIIVVTFVVTI------------FYTVLDEYVQETGADGLGRLVV 105 usage_00548.pdb 59 PKNFFT-NPWEVADGLIIVVTFVVTI------------FYTVLDEYVQETGADGLGRLVV 105 knfft npwevadgliiVvtfVvti fytv lgrlvv usage_00205.pdb 101 IISRMKQLEDKIEELLSKIYHLENEIA 127 usage_00545.pdb 106 LARLLRVVRLARI-------------- 118 usage_00546.pdb 106 LARLLRVVRLAR--------------- 117 usage_00547.pdb 106 LARLLRVVRLAR--------------- 117 usage_00548.pdb 106 LARLLRVVRLAR--------------- 117 larllrvvrlar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################