################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:35 2021 # Report_file: c_1305_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00674.pdb # 2: usage_00675.pdb # 3: usage_00682.pdb # 4: usage_00714.pdb # 5: usage_01291.pdb # # Length: 83 # Identity: 16/ 83 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 83 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 83 ( 55.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00674.pdb 1 SIEDKNARVIELIAAYRNRGHLMADIDPLRLDNTRF---RSH-PDLDVNSHGLTLWDLDR 56 usage_00675.pdb 1 -IEDKNARVIELIAAYRNRGHLMADIDPLRLDNTRFSHG------LTL-------WDLDR 46 usage_00682.pdb 1 -TNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQ--------DDLDPSFHDLTE--DFQE 49 usage_00714.pdb 1 -----NARVIELIAAYRNRGHLMADIDPLRLDNTRF---------------R-----LDR 35 usage_01291.pdb 1 ----KNARVIELIAAYRNRGHLMADIDPLRLDNTRF-------------------WDLDR 37 narVieLIaAYRnRGHlmAdiDPLrLdnt ldr usage_00674.pdb 57 EFKVDG----FAGVQRKK----- 70 usage_00675.pdb 47 EFKV-VQRKK------------- 55 usage_00682.pdb 50 TFNVGS-----F------AETMK 61 usage_00714.pdb 36 EFKV-VQRKK------------- 44 usage_01291.pdb 38 EFKVDVQRKK------------- 47 eFkV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################