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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:00:52 2021
# Report_file: c_0398_106.html
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#====================================
# Aligned_structures: 5
#   1: usage_00215.pdb
#   2: usage_00218.pdb
#   3: usage_00223.pdb
#   4: usage_00330.pdb
#   5: usage_00475.pdb
#
# Length:        203
# Identity:      160/203 ( 78.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    160/203 ( 78.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           43/203 ( 21.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00215.pdb         1  -----------------NVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV   43
usage_00218.pdb         1  -----------------NVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV   43
usage_00223.pdb         1  -----------------NVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV   43
usage_00330.pdb         1  DNYRSELDVSGPLTESGNVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV   60
usage_00475.pdb         1  --------------------GRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV   40
                                               GRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTV

usage_00215.pdb        44  GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN  103
usage_00218.pdb        44  GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN  103
usage_00223.pdb        44  GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN  103
usage_00330.pdb        61  GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN  120
usage_00475.pdb        41  GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN  100
                           GADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFAN

usage_00215.pdb       104  GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL  163
usage_00218.pdb       104  GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL  163
usage_00223.pdb       104  GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL  163
usage_00330.pdb       121  GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL  180
usage_00475.pdb       101  GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL  160
                           GWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFL

usage_00215.pdb       164  GREHELVVGTSASFSHWEGKSYW  186
usage_00218.pdb       164  GREHELVVGTSASFSHWEGKSYW  186
usage_00223.pdb       164  GREHELVVGTSASFSHWEGKSYW  186
usage_00330.pdb            -----------------------     
usage_00475.pdb       161  GREHELVVGTSASFSHWEGKSYW  183
                                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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