################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:30 2021 # Report_file: c_1218_60.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00106.pdb # 2: usage_00223.pdb # 3: usage_00224.pdb # 4: usage_00292.pdb # 5: usage_00379.pdb # 6: usage_00424.pdb # 7: usage_00450.pdb # 8: usage_00526.pdb # 9: usage_00527.pdb # 10: usage_00578.pdb # 11: usage_00672.pdb # 12: usage_00684.pdb # 13: usage_00686.pdb # 14: usage_00693.pdb # 15: usage_00743.pdb # 16: usage_00773.pdb # 17: usage_00799.pdb # # Length: 79 # Identity: 23/ 79 ( 29.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 79 ( 34.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 79 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00106.pdb 1 LAVNEDSELKILDFGLA--RHT---D--------D--EMTGYVATRWYRAPEIMLNWMHY 45 usage_00223.pdb 1 LAVNEDCELKILDFGLA--R---------------------YVATRWYRAPEIMLNWMHY 37 usage_00224.pdb 1 LAVNEDCELKILDFGLA--R----------------------HATRWYRAPEIMLNWMHY 36 usage_00292.pdb 1 LAVNEDCELKILD-FGL----A------------RHT-----VATRWYRAPEIMLNWMHY 38 usage_00379.pdb 1 LAVNEDCELKILDFGLA--RHA---DA-----------EMG-VVTRWYRAPEVILSWMHY 43 usage_00424.pdb 1 LAVNEDCELKILDFGLA--RHT---D--------D--EMTGYVATRWYRAPEIMLNWMHY 45 usage_00450.pdb 1 LLVNENCELKIGDFGMA--RGLYFM--------------TEYVATRWYRAPELMLSLHEY 44 usage_00526.pdb 1 LAVN-EDELKILDFGLA--RHT----------------MTGYVATRWYRAPEIMLNWMHY 41 usage_00527.pdb 1 LAVNEDCELKILDFGLA--RHT---D--------D--EMTGYVATRWYRAPEIMLNWMHY 45 usage_00578.pdb 1 LAVNEDCELKILDFGLA--R-----------------------ATRWYRAPEIM------ 29 usage_00672.pdb 1 LAVNEDCELKILDFGLA---RH--------------------VATRWYRAPEIMLNWMHY 37 usage_00684.pdb 1 LLLNTTCDLKICDFGLA--RVA---DPDHDHTGF----LTEYVATRWYRAPEIMLNSKGY 51 usage_00686.pdb 1 LAVNEDCELKILDFGLA--RHT---D--------D--EMTGYVATRWYRAPEIMLNWMHY 45 usage_00693.pdb 1 LAVNEDCELKILDFGLAGYV-----------------------ATRWYRAPEIM-----Y 32 usage_00743.pdb 1 LAVNEDCELKILD-FGL----A--------------------VATRWYRAPEIMLNWMHY 35 usage_00773.pdb 1 LLLNT-TDLKICDFGLA--RVA---DPDHDHTGF----LTEYVATRWYRAPEIMLNSKGY 50 usage_00799.pdb 1 LAVNEDCELKILDF-----------D--------D--EMTGYVATRWYRAPEIMLNWMHY 39 L N LKI D aTRWYRAPE m usage_00106.pdb 46 NQTVDIWSVGCIMAELL-- 62 usage_00223.pdb 38 NQTVDIWSVGCIMAELL-- 54 usage_00224.pdb 37 NQTVDIWSVGCIMAELL-- 53 usage_00292.pdb 39 NQTVDIWSVGCIMAELL-- 55 usage_00379.pdb 44 NQTVDIWSVGCIMAEMLT- 61 usage_00424.pdb 46 NQTVDIWSVGCIMAELL-- 62 usage_00450.pdb 45 TQAIDLWSVGCIFGEML-- 61 usage_00526.pdb 42 NQTVDIWSVGCIMAELLTG 60 usage_00527.pdb 46 NQTVDIWSVGCIMAELLTG 64 usage_00578.pdb 30 NQTVDIWSVGCIMAELLTG 48 usage_00672.pdb 38 NQTVDIWSVGCIMAELLT- 55 usage_00684.pdb 52 TKSIDIWSVGCILAEMLS- 69 usage_00686.pdb 46 NQTVDIWSVGCIMAELL-- 62 usage_00693.pdb 33 NQTVDIWSVGCIMAELLT- 50 usage_00743.pdb 36 NQTVDIWSVGCIMAELLT- 53 usage_00773.pdb 51 TKSIDIWSVGCILAEMLS- 68 usage_00799.pdb 40 NQTVDIWSVGCIMAELLT- 57 DiWSVGCI aE L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################