################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:30 2021 # Report_file: c_0212_17.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00033.pdb # 2: usage_00058.pdb # 3: usage_00085.pdb # 4: usage_00086.pdb # 5: usage_00099.pdb # 6: usage_00100.pdb # 7: usage_00309.pdb # 8: usage_00310.pdb # 9: usage_00311.pdb # 10: usage_00312.pdb # 11: usage_00357.pdb # # Length: 108 # Identity: 53/108 ( 49.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/108 ( 50.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/108 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --QLAESGPGLVAPSQSLSITCTVSGFSLTDYGVDWVRQPPGKGLEWLGMIWGDGSTDYN 58 usage_00058.pdb 1 QVQLKESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGSTDYN 60 usage_00085.pdb 1 --QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGNTGYN 58 usage_00086.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFSLTDYGVDWVRQPPGKGLEWLGMIWGDGSTDYN 59 usage_00099.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYN 58 usage_00100.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYN 59 usage_00309.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLIGYDINWVRQPPGKGLEWLGMIWGDGTTDYN 58 usage_00310.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLIGYDINWVRQPPGKGLEWLGMIWGDGTTDYN 58 usage_00311.pdb 1 -VQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYN 59 usage_00312.pdb 1 --QLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGNIDTGGITGYN 58 usage_00357.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYN 58 QL ESGP LV PSQ LS TCT SGF L WVRQ PGK LEWLG I G T YN usage_00033.pdb 59 SALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCVRDPAD------- 99 usage_00058.pdb 61 SALKSRLNISKDKSKSQVFLRMYSLQTDDTARYYCAR----------- 97 usage_00085.pdb 59 PGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTSVHQETKK---- 102 usage_00086.pdb 60 SALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCVRDP--------- 98 usage_00099.pdb 59 SALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCAR----------- 95 usage_00100.pdb 60 SALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCAR----------- 96 usage_00309.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLRTDDTATYSCARGGYY------- 99 usage_00310.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLRTDDTATYSCARGGYY------- 99 usage_00311.pdb 60 PGLKSRLSITKDNSKNQVSLSVSSATAEDSATYYCTTVHQKTLEVRSC 107 usage_00312.pdb 59 PGLKSRLSITKDNSKNQVSLSVSSATAEDSATYYCT------------ 94 usage_00357.pdb 59 SALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCAR----------- 95 L SR sI KDnSK QV L S D A Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################