################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:23 2021 # Report_file: c_1422_23.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00016.pdb # 2: usage_00164.pdb # 3: usage_00166.pdb # 4: usage_00167.pdb # 5: usage_00206.pdb # 6: usage_00342.pdb # 7: usage_00343.pdb # 8: usage_00367.pdb # 9: usage_00467.pdb # 10: usage_00468.pdb # 11: usage_00638.pdb # 12: usage_00823.pdb # 13: usage_00985.pdb # 14: usage_01019.pdb # 15: usage_01068.pdb # 16: usage_01123.pdb # # Length: 96 # Identity: 62/ 96 ( 64.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 96 ( 74.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 96 ( 26.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 59 usage_00164.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00166.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00167.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00206.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00342.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 59 usage_00343.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00367.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00467.pdb 1 --NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 57 usage_00468.pdb 1 --NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 57 usage_00638.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 59 usage_00823.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_00985.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 59 usage_01019.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNG----LDRAELI 55 usage_01068.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 58 usage_01123.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN-GDGQLDRAELI 59 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN LDRAELI usage_00016.pdb 60 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLDAV-- 92 usage_00164.pdb 59 EGYKELMR----------AS-AVEHEVDQVLD---- 79 usage_00166.pdb 59 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLDAVD- 92 usage_00167.pdb 59 EGYKELMR----DASMLDAS-AVEHEVDQVLDAVD- 88 usage_00206.pdb 59 EGYKELMR-M----SMLDAS-AVEHEVDQVLDAVD- 87 usage_00342.pdb 60 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLD---- 90 usage_00343.pdb 59 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLDAVD- 92 usage_00367.pdb 59 EGYKELMRMKG---QDASMS-AVEHEVDQVLDAVDF 90 usage_00467.pdb 58 EGYKELMK------SMLDAS-AVEHEVDQVLDAV-- 84 usage_00468.pdb 58 EGYKELMK------SMLDAS-AVEHEVDQVLDAV-- 84 usage_00638.pdb 60 EGYKELMRMKG---SMLDAS-AVEHEVDQVLDAVD- 90 usage_00823.pdb 59 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLDAV-- 91 usage_00985.pdb 60 EGYKELMRMKGQDASMLDAS-AVEHEVDQVLDAV-- 92 usage_01019.pdb 56 EGYKELM--------------LDASAVEHEVDQVLD 77 usage_01068.pdb 59 EGYKELMR------------MAVEHEVDQVLDAVDF 82 usage_01123.pdb 60 EGYKELMKMKGQDASMLDAS-AVEHEVDQVLDAVDF 94 EGYKELM aveheVdqvlD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################