################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:28 2021 # Report_file: c_1298_78.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00010.pdb # 2: usage_00058.pdb # 3: usage_00175.pdb # 4: usage_00349.pdb # 5: usage_00350.pdb # 6: usage_00420.pdb # 7: usage_00617.pdb # 8: usage_00618.pdb # 9: usage_00619.pdb # 10: usage_00620.pdb # 11: usage_00621.pdb # 12: usage_00622.pdb # 13: usage_00623.pdb # 14: usage_00624.pdb # 15: usage_00708.pdb # 16: usage_00710.pdb # 17: usage_00711.pdb # 18: usage_00883.pdb # 19: usage_00884.pdb # 20: usage_00885.pdb # 21: usage_00886.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 47 ( 46.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 47 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 ---RSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFT- 43 usage_00058.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 45 usage_00175.pdb 1 KVDRSGAYCARWIAKSLVHAGLCHRVLVQLSYAIGVSHPLSINVNT- 46 usage_00349.pdb 1 -VDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFT- 45 usage_00350.pdb 1 -VDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFT- 45 usage_00420.pdb 1 -----TCLRALVEMARVGGAS-S--L-ENTVDLHIS-N-SHPLSLT- 35 usage_00617.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAISH--PLSISIFH- 43 usage_00618.pdb 1 ---RSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 43 usage_00619.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIH---PLSISIFHY 43 usage_00620.pdb 1 ---RSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 43 usage_00621.pdb 1 KVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 46 usage_00622.pdb 1 KVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 46 usage_00623.pdb 1 KVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 46 usage_00624.pdb 1 ---RSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 43 usage_00708.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 45 usage_00710.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 45 usage_00711.pdb 1 ---RSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 43 usage_00883.pdb 1 KVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 46 usage_00884.pdb 1 ---RSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 43 usage_00885.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 45 usage_00886.pdb 1 -VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFH- 45 ay Arw akslv g c v vq syai lsi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################