################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:30 2021 # Report_file: c_0147_35.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00083.pdb # 2: usage_00084.pdb # 3: usage_00094.pdb # 4: usage_00152.pdb # 5: usage_00194.pdb # 6: usage_00195.pdb # 7: usage_00197.pdb # 8: usage_00198.pdb # 9: usage_00199.pdb # 10: usage_00200.pdb # 11: usage_00201.pdb # 12: usage_00327.pdb # 13: usage_00348.pdb # 14: usage_00349.pdb # 15: usage_00399.pdb # 16: usage_00626.pdb # 17: usage_00713.pdb # 18: usage_00735.pdb # # Length: 139 # Identity: 58/139 ( 41.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/139 ( 55.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/139 ( 20.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFSNYAINWVRQAPGQGLEWMGGIIPIFNIAH 57 usage_00084.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFSNYAINWVRQAPGQGLEWMGGIIPIFNIAH 57 usage_00094.pdb 1 --QLVQSGAEVRKPGASVKVSCKASGD-TFSSYAISWVRQAPGQGLEWMGGIIPIFGTAN 57 usage_00152.pdb 1 -VQLVQSGAEVRKPGSSVKVSCKASRG-TFSNHAVSWVRQAPGHGLEWLGGLIPIFSTPH 58 usage_00194.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFNSYAFSWVRQAPGQGLEWMGSIIPIFGTTN 57 usage_00195.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFNSYAFSWVRQAPGQGLEWMGSIIPLFGFVV 57 usage_00197.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFSNYAINWVRQAPGQGLEWMGGIIPIFNIAH 57 usage_00198.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFSNYAINWVRQAPGQGLEWMGGIIPIFNIAH 57 usage_00199.pdb 1 -VQLLQSGAEVKKPGSSVKVSCKASGG-TFSSYAISWVRQAPGQGLEWMGGIIPVFGSAN 58 usage_00200.pdb 1 -VQLLQSGAEVKKPGSSVKVSCKASGG-TFSSYAISWVRQAPGQGLEWMGGIIPVFGSAN 58 usage_00201.pdb 1 QVQLLQSGAEVKKPGSSVKVSCKASGG-TFSSYAISWVRQAPGQGLEWMGGIIPVFGSAN 59 usage_00327.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGGDTFSNYAISWVRQAPGQGFEWMGGIIPIFGTAN 59 usage_00348.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGG-TFRTYAMHWVRQAPGQGLEWMGGIVPYHGITD 58 usage_00349.pdb 1 QVQLVQSGAEVKKPGSSVKVSCKASGG-TFRTYAMHWVRQAPGQGLEWMGGIVPYHGITD 59 usage_00399.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFNSYAFSWVRQAPGQGLEWMGSIIPIFGTTN 57 usage_00626.pdb 1 EVQLVESGAEVKKPGSSVKVSCKASGG-TFITHVFTWVRQAPGQGLEWVGGFIAIFGTSN 59 usage_00713.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG-TFNSYAFSWVRQAPGQGLEWMGSIIPLFGFVV 57 usage_00735.pdb 1 QVQLVQSGAEVKKPGSSVKVSCKASGG-NFNTYTISWVRQAPGQGLEWMGRIIPIFGIVN 59 QL qSGAEV KPGsSVKVSCKASgg tF WVRQAPGqGlEW G p usage_00083.pdb 58 YAQRFQGRVSITADESTSTAYMELSSLRSEDTAVFYCASPYP-N--DNDAPEEGM----- 109 usage_00084.pdb 58 YAQRFQGRVSITADESTSTAYMELSSLRSEDTAVFYCASPYP-N--DNDAPEEGM----- 109 usage_00094.pdb 58 YAQAFQGRVTITANESTSTAYMELSSLRSEDTAIYYCARDN------P------T----- 100 usage_00152.pdb 59 YAQKFQGRVTITADESTNTVHMELSSLRSEDTAVYYCAREI-PGATSG-------PDHF- 109 usage_00194.pdb 58 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFDT----Y------N----- 102 usage_00195.pdb 58 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFDT----Y------N----- 102 usage_00197.pdb 58 YAQRFQGRVSITADESTSTAYMELSSLRSEDTAVFYCASPYP-N---D-----GM----- 103 usage_00198.pdb 58 YAQRFQGRVSITADESTSTAYMELSSLRSEDTAVFYCASPYP-N---D-----GM----- 103 usage_00199.pdb 59 YAQKFQGRVTITADEATSTTYMELSSLRSEDTAVYFCAKGG------------------- 99 usage_00200.pdb 59 YAQKFQGRVTITADEATSTTYMELSSLRSEDTAVYFCAKG-------------------- 98 usage_00201.pdb 60 YAQKFQGRVTITADEATSTTYMELSSLRSEDTAVYFCAKGG------------------- 100 usage_00327.pdb 60 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGP-EY-YDY------VW---G 108 usage_00348.pdb 59 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDD-Y-----------S----- 101 usage_00349.pdb 60 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDD-Y-----------S----- 102 usage_00399.pdb 58 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFDT----Y------N----- 102 usage_00626.pdb 60 YAQKFQGRVTITADESTSTAYMELTSLTSEDTAVYYCARGI-S----G------S----- 103 usage_00713.pdb 58 YAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFDT----Y------N----- 102 usage_00735.pdb 60 PAQKFPGRVTINVDKSTNTAYMELSSLRSEDTAVYYCATSG-VG----------L----- 103 yAQ FqGRV Itade T T yMELsSLrSEDTAv CA usage_00083.pdb 110 --S-WYFDLWGRGTLVTV- 124 usage_00084.pdb 110 --S-WYFDLWGRGTLVTV- 124 usage_00094.pdb 101 --L-LGSDYWGAGTLVTVS 116 usage_00152.pdb 110 --FFYGMDVWGQGTTVAV- 125 usage_00194.pdb 103 --N-YGFANWGQGTLVTV- 117 usage_00195.pdb 103 --N-YGFANWGQGTLVTVS 118 usage_00197.pdb 104 --S-WYFDLWGRGTLVTVS 119 usage_00198.pdb 104 --S-WYFDLWGRGTLVTVS 119 usage_00199.pdb 100 ----HGMDVWGQGTTVTV- 113 usage_00200.pdb 99 ----HGMDVWGQGTTVTVA 113 usage_00201.pdb 101 ----HGMDVWGQGTTVTVA 115 usage_00327.pdb 109 SYRYNYFDYWGQGTLVTVS 127 usage_00348.pdb 102 --T-YAFAYWGQGTLVTVS 117 usage_00349.pdb 103 --T-YAFAYWGQGTLVTVS 118 usage_00399.pdb 103 --N-YGFANWGQGTLVTVS 118 usage_00626.pdb 104 --Y-GWFDPWGQGTLVTVS 119 usage_00713.pdb 103 --N-YGFANWGQGTLVTVS 118 usage_00735.pdb 104 --HFGYFDYWGQGTQVTVS 120 WG GT VtV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################