################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:57 2021 # Report_file: c_0141_50.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00202.pdb # 2: usage_00203.pdb # 3: usage_00304.pdb # 4: usage_00305.pdb # 5: usage_00327.pdb # 6: usage_00384.pdb # # Length: 185 # Identity: 52/185 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/185 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/185 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00202.pdb 1 -EQIQGIMKAVVQLKSPVILQCSRGALKYSDM-IYLKKLCEAALE-K-HPDIPICIHLDH 56 usage_00203.pdb 1 -EQIQGIMKAVVQLKSPVILQCSRGALKYSDM-IYLKKLCEAALE-K-HPDIPICIHLDH 56 usage_00304.pdb 1 FEMLNAIFEAGNEENSPLFIQASEGAIKYMGI-DMAVGMVKIMCE-R-YPHIPVALHLDH 57 usage_00305.pdb 1 FEMLNAIFEAGNEENSPLFIQASEGAIKYMGI-DMAVGMVKIMCE-R-YPHIPVALHLDH 57 usage_00327.pdb 1 LEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNI-TIPVAIHLDH 59 usage_00384.pdb 1 FEMLNAIFEAGNEENSPLFIQASEGAIKYMGI-DMAVGMVKIMCE-R-YPHIPVALHLDH 57 E I A sP q S GA kY e IP HLDH usage_00202.pdb 57 GDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELG------- 109 usage_00203.pdb 57 GDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGQNTV--- 113 usage_00304.pdb 58 GTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELG----RLM 113 usage_00305.pdb 58 GTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELG----RLM 113 usage_00327.pdb 60 GSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELG----TVG 115 usage_00384.pdb 58 GTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELG------- 110 G t Es A GF SVMIDASHh F EN T VV AH VSVEAELG usage_00202.pdb 110 --------------LTEPQDAKKFVELTGVDALAVAIGTSHGA-------RLAIDRVKTI 148 usage_00203.pdb 114 -------------QLTEPQDAKKFVELTGVDALAVAIGTSHGAYKF---IRLAIDRVKTI 157 usage_00304.pdb 114 GI-----------VLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV 162 usage_00305.pdb 114 GIA----------VLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV 163 usage_00327.pdb 116 ---GDDVVADGI-IYADPKECQELVEKTGIDALAPALGSVH--------PKLGFKEMEEI 163 usage_00384.pdb 111 ------------RVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV 158 l P a fV vD LA AiGtsH L r usage_00202.pdb 149 SDLT- 152 usage_00203.pdb 158 SDL-- 160 usage_00304.pdb 163 KRLTN 167 usage_00305.pdb 164 KRLTN 168 usage_00327.pdb 164 GLSTG 168 usage_00384.pdb 159 KRLTN 163 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################