################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:39 2021 # Report_file: c_0828_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00197.pdb # 3: usage_00218.pdb # 4: usage_00270.pdb # 5: usage_00384.pdb # 6: usage_00415.pdb # # Length: 61 # Identity: 5/ 61 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 61 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 61 ( 37.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 DRERFQHAVERLKLKQPANATVTAIEM---AVEKAKEIGYPLVVRA--------AMEIVY 49 usage_00197.pdb 1 -KWATSVALAKAGLPQPKTALATDREE---ALRLMEAFGYPVVLKPVIXXXX-------- 48 usage_00218.pdb 1 -RERFQHAVERLKLKQPANATVTAIEM---AVEKAKEIGYPLVVRA--------MEIVYD 48 usage_00270.pdb 1 --ERFQHAVERLKLKQPANATVTAIEM---AVEKAKEIGYPLVVRP--------SAMEIV 47 usage_00384.pdb 1 DKNISKKILRYEGIETPDWIELTK---EDLNFDELDKLGFPLVVKPN-----SGGVKIVY 52 usage_00415.pdb 1 DRERFQHAVERLKLKQPANATVTAIEM---AVEKAKEIGYPLVVRP--------AMEIVY 49 a l qP a T a GyPlVv usage_00008.pdb 50 D 50 usage_00197.pdb - usage_00218.pdb - usage_00270.pdb 48 Y 48 usage_00384.pdb 53 D 53 usage_00415.pdb 50 D 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################