################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:04 2021 # Report_file: c_0289_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00026.pdb # 2: usage_00030.pdb # 3: usage_00048.pdb # 4: usage_00213.pdb # 5: usage_00217.pdb # 6: usage_00238.pdb # # Length: 168 # Identity: 32/168 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/168 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/168 ( 31.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 TWYTDGSSFLQEG----QRRAGAAVTTE------TEVIWARA-LPAGTSAQRAELIALTQ 49 usage_00030.pdb 1 TWYTDGSSLLQEG----QRKAGAAVTTE------TEVIWAKA-LPAGTSAQRAELIALTQ 49 usage_00048.pdb 1 VFYTDGSAIKSP-DPTKSNNAGMGIVH-ATYKPEYQVLNQWSIPLGNHTAQMAEIAAVEF 58 usage_00213.pdb 1 TWYTDGSSFLQEG----QRRAGAAVTTE------TEVIWARA-LPAGTSAQRAELIALTQ 49 usage_00217.pdb 1 TWYTDGSSFLQEG----QRRAGAAVTTE------TEVIWARA-LPAGTSAQRAELIALTQ 49 usage_00238.pdb 1 TWYTDGSSLLQ-------RKAGAAVTTE------TEVIWAKA-LPAGTSAQRAELIALTQ 46 twYTDGSs lq r AGaavtt teViwa a lpagtsAQrAEliAltq usage_00026.pdb 50 ALKMA-E-GKKLNVYTDSRYAFATAHVH-----------S--EGREIKNKNEILALLKAL 94 usage_00030.pdb 50 ALK-A-E-GKKLNVYTDSRYAFATAHLT-----------S--EGKEIKNKDEILALLKAL 93 usage_00048.pdb 59 ACKKALKIPGPVLVITDSFYVAESANKELPYWKSNGFVNNK-KK-PLKHISKWKSIAECL 116 usage_00213.pdb 50 ALKMA-E-GKKLNVYTDSRYAFATAHVH-----------S--EGREIKNKNEILALLKAL 94 usage_00217.pdb 50 ALKMA-E-GKKLNVYTDSRYAFATAHVHGEIYRRRGLLTS--EGREIKNKNEILALLKAL 105 usage_00238.pdb 47 ALKMA-E-GKKLNVYTDSRYAFATAHIH-----------G-E---EIKNKDEILALLKAL 89 AlK A e gkklnVyTDSrYafatAh eiKnk eilallkaL usage_00026.pdb 95 FLPK-RLSIIHC-PGH-Q---KGNSAEARGNRMADQAAREAAMKAVLE 136 usage_00030.pdb 94 FLPK-RLSIIHCG----------HSAEARGNR-ADQAARKAAITE--- 126 usage_00048.pdb 117 SMK-PDITIQHE-KGH-QPTN--TSIHTEGNALADKLATQGSYVV--- 156 usage_00213.pdb 95 FLPK-RLSIIHC-PGH-Q---KGNSAEARGNRMADQAAREAAMKAVLE 136 usage_00217.pdb 106 FLPK-RLSIIHC-P-GHQ---KGNSAEARGNRMADQAAREAAMKA--- 144 usage_00238.pdb 90 FLPK-RLSIIHC-P---------HSAEARGNRMADQAARKAAI----- 121 flp rlsIiHc SaearGNr ADqaAr aa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################