################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:15 2021 # Report_file: c_0329_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00022.pdb # # Length: 214 # Identity: 56/214 ( 26.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/214 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/214 ( 25.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 NPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVN 60 usage_00009.pdb 1 NPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVN 60 usage_00010.pdb 1 --------------KMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVN 46 usage_00018.pdb 1 ---------------IPTIAAWAYKYTQGEAFIYPRNDLNYAENFLSMMFARMSEPYKVN 45 usage_00019.pdb 1 ---------------IPTIAAWAYKYTQGEAFIYPRNDLNYAENFLSMMFARMSEPYKVN 45 usage_00022.pdb 1 --------------KMPTIVAYHYRFSRGLEVVRPRDDLGHAANFLYMMFG-----REPD 41 PT aA Yky G f yPRnDL yA NFL MMF y vn usage_00004.pdb 61 PILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAAL 120 usage_00009.pdb 61 PILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAAL 120 usage_00010.pdb 47 PILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAAL 106 usage_00018.pdb 46 PVLARAMNRILILHADHEQNASTSTVRLAGSTGANPFACIAAGIAALWGP----AHGGAN 101 usage_00019.pdb 46 PVLARAMNRILILHADHEQNASTSTVRLAGSTGANPFACIAAGIAALWGP----AHGGAN 101 usage_00022.pdb 42 PLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGP----LHGGAN 97 P l Ram riLILHADHEqnASTstvr agS ganpfaciAAgIA LwGP a A usage_00004.pdb 121 KMLE-EISS--VKHIPEFFRRAKDKNDSFR--------LMGFGHRVYKNYDPRATVMRET 169 usage_00009.pdb 121 KMLE-EIGK--KENIPEFVRRAKDKNDSFR--------LMGFGHRVYKNYDPRATVMRET 169 usage_00010.pdb 107 KMLE-EIGK--KENIPEFVRRAKDKNDSFR--------LMGFGHRVYKNYDPRATVMRET 155 usage_00018.pdb 102 EAVLKMLA-RIGKKENIPAFIAQV------KDKNSGVKLMGFGHRVYKNFDPRAKIMQQT 154 usage_00019.pdb 102 EAVLKMLA-RIGKKENIPAFIAQV------KDKNSGVKLMGFGHRVYKNFDPRAKIMQQT 154 usage_00022.pdb 98 EMAVRNYL-EIGTPAKAKEIVEAA------TKP-GGPKLMGVGHRVYKAYDPRAKIFKEF 149 a LMGfGHRVYKn DPRA m t usage_00004.pdb 170 CHEVLKELGTKDD------LLEVAMELENIAL-- 195 usage_00009.pdb 170 CHEVLKELGTKDD------LLEVAMELENIAL-- 195 usage_00010.pdb 156 CHEVLKELGTKDD------LLEVAMELENIAL-- 181 usage_00018.pdb 155 CHEVLTELG----I-KDDPLLDLAVELEKIALSD 183 usage_00019.pdb 155 CHEVLTELG----I-KDDPLLDLAVELEKIALSD 183 usage_00022.pdb 150 SRDYVAKFG----DP-Q-NLFAIASAIEQEVLS- 176 chevl elG Ll A elE iaL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################