################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:30 2021 # Report_file: c_0889_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00008.pdb # 4: usage_00016.pdb # 5: usage_00040.pdb # 6: usage_00046.pdb # 7: usage_00047.pdb # # Length: 106 # Identity: 52/106 ( 49.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/106 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/106 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -DITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDF--NKEVHKSGYLAGDKL 57 usage_00004.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDY--NKEIHKPGYLANDRL 58 usage_00008.pdb 1 QDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDF--NKEVHKSGYLAGDKL 58 usage_00016.pdb 1 QEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGDH--NPAVHGPGFLANDRL 58 usage_00040.pdb 1 QDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYGY------------ERL 48 usage_00046.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDY--NKEIHKPGYLANDRL 58 usage_00047.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDY--NKEIHKPGYLANDRL 58 ITq LFfLQVKe IL D IYCPPETaVLLaSYAVQ k GD d L usage_00002.pdb 58 LPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDL 103 usage_00004.pdb 59 LPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIA--- 101 usage_00008.pdb 59 LPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIA--- 101 usage_00016.pdb 59 LPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIA--- 101 usage_00040.pdb 49 IPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDL 94 usage_00046.pdb 59 LPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDL 104 usage_00047.pdb 59 LPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDL 104 lPQRV QHKl qWE rIq Wh EHRGMLred EYLKIA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################