################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:59 2021 # Report_file: c_1276_67.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00490.pdb # 2: usage_00491.pdb # 3: usage_00692.pdb # 4: usage_00693.pdb # 5: usage_00694.pdb # 6: usage_00695.pdb # 7: usage_00934.pdb # 8: usage_00935.pdb # 9: usage_01403.pdb # 10: usage_01404.pdb # # Length: 43 # Identity: 8/ 43 ( 18.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 43 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 43 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00490.pdb 1 ----ALAVDQREAR-LFAAAGAKTPVADSVLTDFKVNAAKILS 38 usage_00491.pdb 1 GVISALAFDQRGALKCLA-Q-YQKEPTVAQ-EELKVLVSEELT 40 usage_00692.pdb 1 GVISALAFDQRGALKR--AQHQTKEPTVEQIEELKSLVSEELT 41 usage_00693.pdb 1 -VISALAFDQRGALKR--AQHQTKEPTVEQIEELKSLVSEELT 40 usage_00694.pdb 1 GVISALAFDQRGALKR--AQHQTKEPTVEQIEELKSLVSEELT 41 usage_00695.pdb 1 GVISALAFDQRGALKR--AQHQTKEPTVEQIEELKSLVSEELT 41 usage_00934.pdb 1 -VISALAFDQRGALKRMMAQHQTKEPTVEQIEELKSLVSEELT 42 usage_00935.pdb 1 GVISALAFDQRGALKRMMAQHQTKEPTVEQIEELKSLVSEELT 43 usage_01403.pdb 1 GIISALAFDQRGALKQMMAAHQEGEATVTQIETLKVLVSE--- 40 usage_01404.pdb 1 GIISALAFDQRGALKQMMAAHQEGEATVTQIETLKVLVSE--- 40 ALAfDQRgAl e tv q e lK lvse #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################