################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:52 2021 # Report_file: c_1290_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00011.pdb # 2: usage_00021.pdb # 3: usage_00023.pdb # 4: usage_00025.pdb # 5: usage_00110.pdb # 6: usage_00115.pdb # 7: usage_00214.pdb # 8: usage_00340.pdb # 9: usage_00341.pdb # 10: usage_00354.pdb # 11: usage_00380.pdb # 12: usage_00382.pdb # 13: usage_00560.pdb # 14: usage_00613.pdb # 15: usage_00614.pdb # 16: usage_00615.pdb # 17: usage_00616.pdb # # Length: 78 # Identity: 55/ 78 ( 70.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 78 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 78 ( 2.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00021.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00023.pdb 1 AAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFG 60 usage_00025.pdb 1 AAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFG 60 usage_00110.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00115.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLAEQMLVSCDKTDSG 60 usage_00214.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00340.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00341.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00354.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00380.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00382.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00560.pdb 1 AAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00613.pdb 1 AAVDWRARGAVTAVKDQGQCGSSWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00614.pdb 1 AAVDWRARGAVTAVKDQGQCGSSWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00615.pdb 1 AAVDWRARGAVTAVKDQGQCGSSWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 usage_00616.pdb 1 AAVDWRARGAVTAVKDQGQCGSSWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSG 60 AAVDWR GAVT VKDQGQCGS WAFS IGN E QW AG PL LsEQMLVSCD D G usage_00011.pdb 61 CSGGLMNNAFEWIVQE-- 76 usage_00021.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00023.pdb 61 CGGGLMDNAFNWIVNSNG 78 usage_00025.pdb 61 CGGGLMDNAFNWIVNS-- 76 usage_00110.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00115.pdb 61 CSGGLMNNAFEWIVQEN- 77 usage_00214.pdb 61 CSGGLMNNAFEWIVQE-- 76 usage_00340.pdb 61 CSGGLMNNAFEWIVQEN- 77 usage_00341.pdb 61 CSGGLMNNAFEWIVQE-- 76 usage_00354.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00380.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00382.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00560.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00613.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00614.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00615.pdb 61 CSGGLMNNAFEWIVQENN 78 usage_00616.pdb 61 CSGGLMNNAFEWIVQENN 78 C GGLM NAF WIV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################