################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:52:22 2021 # Report_file: c_0152_9.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00004.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00021.pdb # 7: usage_00024.pdb # 8: usage_00032.pdb # 9: usage_00037.pdb # 10: usage_00039.pdb # 11: usage_00042.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # 14: usage_00070.pdb # 15: usage_00107.pdb # 16: usage_00108.pdb # 17: usage_00109.pdb # 18: usage_00149.pdb # 19: usage_00199.pdb # 20: usage_00202.pdb # 21: usage_00203.pdb # 22: usage_00217.pdb # 23: usage_00220.pdb # # Length: 110 # Identity: 29/110 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/110 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/110 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -IVMTQSPFSMYATLGERVTITCKASQDIYSYLSWLQQKPGKSLKTLIYRANRLITGVPS 59 usage_00016.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDINNYLIWYQQKPGQAPKLLIYDASTLETGVPS 59 usage_00017.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDINNYLIWYQQKPGQAPKLLIYDASTLETGVPS 58 usage_00018.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDINNYLIWYQQKPGQAPKLLIYDASTLETGVPS 58 usage_00019.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDINNYLIWYQQKPGQAPKLLIYDASTLETGVPS 59 usage_00021.pdb 1 -IKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPS 59 usage_00024.pdb 1 --LMTQSPSSMSVSLGDTVSITCHSSQDINSNIGWLQQKPGKSFKGLIYHGTNLDDEVPS 58 usage_00032.pdb 1 -IQMTQSPSSLSAAVGDRVTITCQASQDIVNYLNWYQQKPGKAPKLLIYVASNLETGVPS 59 usage_00037.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDISDYLIWYQQKLGKAPNLLIYDASTLETGVPS 59 usage_00039.pdb 1 DIQMTQSPSSLSASVGDRVTITCQASQDINNFLIWYQQKPGQAPKLLIYDASTLETGVPS 60 usage_00042.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDIIKYLNWYQQTPGKAPKLLIYEASNLQAGVPS 58 usage_00061.pdb 1 -IKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPS 59 usage_00062.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPS 58 usage_00070.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDISNYLAWYQQKPGKAPELRIYDASNLETGVPS 58 usage_00107.pdb 1 --QMTQSPVTLSASIGDRVTITCRASQRIDNWVAWYQQKPGRAPKLLIYKASILETGVPS 58 usage_00108.pdb 1 -IQMTQSPVTLSASIGDRVTITCRASQRIDNWVAWYQQKPGRAPKLLIYKASILETGVPS 59 usage_00109.pdb 1 --VLTQSPSSIYASLGERVTLTCKASQDIHNYLNWFQQKPGKSPKTLIYRANRLVDGVPS 58 usage_00149.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDISNYLIWYQQKPGKAPKLLIYDASNLETGVPS 59 usage_00199.pdb 1 --QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPS 58 usage_00202.pdb 1 -IQLTQSPSSLSASVGDRVTITCQASQDIRKYLNWYQQKPGKAPNLLIYDASNVKTGVPS 59 usage_00203.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDISDYLIWYQQKLGKAPNLLIYDASTLETGVPS 59 usage_00217.pdb 1 -IQMTQSSSSFSVSLGDRVTITCKASEDIHNRLAWYKQKPGNAPRLLISGATSLETGVPS 59 usage_00220.pdb 1 DIQMTQSPVTLSASIGDRVTITCRASQRIDNWVAWYQQKPGRAPKLLIYKASILETGVPS 60 TQSp G rVtiTC aSq I W Qk G li a l gVPS usage_00004.pdb 60 RFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGG-TKLEM--- 105 usage_00016.pdb 60 RFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPYTFGQG-TKLEI--- 105 usage_00017.pdb 59 RFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPYTFGQG-TKLEI--- 104 usage_00018.pdb 59 RFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPYTFGQG-TKLEIK-- 105 usage_00019.pdb 60 RFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPYTFGQG-TKLEI--- 105 usage_00021.pdb 60 RFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGSG-TKLEI--- 105 usage_00024.pdb 59 RFSGSGSGADYSLTISSLESEDFADYYCVQYAQFPWTFGGG-TKLEI--- 104 usage_00032.pdb 60 RFSGSGSGTDFSLTISSLQPEDVATYYCQQYDNLPLTFGGG-TKVEI--- 105 usage_00037.pdb 60 RFSGSGSGTEYTFTISSLQPEDIATYYCQQYDDLPYTFGQG-TKVEI--- 105 usage_00039.pdb 61 RFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPFTFGQG-TKLEI--- 106 usage_00042.pdb 59 RFSGSGSGTDYTFTISSLQPEDIATYYCQQYQSLPYTFGQG-TKLQI--- 104 usage_00061.pdb 60 RFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAG-TKLDL--- 105 usage_00062.pdb 59 RFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRT 108 usage_00070.pdb 59 RFSGSGSGTDFTFTISSLQPEDIATYYCQQYQNLPLTFGPG-TKVDI--- 104 usage_00107.pdb 59 RFSGSGSGTEFTLSINSLQPDDVATYYCQQF----EEFGRG-TKIDI--- 100 usage_00108.pdb 60 RFSGSGSGTEFTLSINSLQPDDVATYYCQQF----EEFGRG-TKIDI--- 101 usage_00109.pdb 59 RFSGGGSGQDYSLTISSLEFEDIGIYYCLQYDEFPPTFGGG-TRLEI--- 104 usage_00149.pdb 60 RFSGSGSGTDFTFTISSLQPEDIATYHCQQYDNLPYTFGQG-TKLEI--- 105 usage_00199.pdb 59 RFSGSGSGTDFTFTISSLQPEDIATYFCQHFDHLPLAFGGG-TKVEI--- 104 usage_00202.pdb 60 RFRGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQG-TRLEI--- 105 usage_00203.pdb 60 RFSGSGSGTEYTFTISSLQPEDIATYYCQQYDDLPYTFGQG-TKVEI--- 105 usage_00217.pdb 60 RFSGSGSGKDYTLSITSLQNEDVATYYCQQYWIGPFTFGSG-TNLEIK-- 106 usage_00220.pdb 61 RFSGSGSGTEFTLSINSLQPDDVATYYCQQF----EEFGRG-TKIDI--- 102 RFsG GSG I SL D Y C q fg G T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################