################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:45 2021 # Report_file: c_1370_69.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00041.pdb # 2: usage_00120.pdb # 3: usage_00787.pdb # 4: usage_00788.pdb # 5: usage_00789.pdb # 6: usage_00790.pdb # 7: usage_01002.pdb # 8: usage_01131.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 67 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 67 ( 59.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 --LERKIKEALLAI-K-----IERTFDKKK-----------IMELYLNQIYLGSGAYGVE 41 usage_00120.pdb 1 SE---EELMESLSK-IKGVKRWTIEMYSIFTLGRLDIMPADDST-------------LKN 43 usage_00787.pdb 1 -----EEAYEYLTS-FKGIGRWTAELVLSMALGKNV-FPADDLG-------------VRR 40 usage_00788.pdb 1 -----EEAYEYLTS-FKGIGRWTAELVLSMALGKNV-FPADDLG-------------VRR 40 usage_00789.pdb 1 -----EEAYEYLTS-FKGIGRWTAELVLSIALGKNV-FPADDLG-------------VRR 40 usage_00790.pdb 1 GE---EEAYEYLTS-FKGIGRWTAELVLSIALGKNV-FPADDLG-------------VRR 42 usage_01002.pdb 1 -------DPDEFSR-LKGVGPYTVGAVLSLAYGVPE-PAVDGNV-------------MRV 38 usage_01131.pdb 1 -------TAETLQQLLPGVGRYTAGAIASIAFGQAT-GVVDGNV-------------ARV 39 l t usage_00041.pdb 42 AAAQV-- 46 usage_00120.pdb 44 EAKEFFG 50 usage_00787.pdb 41 AVSRL-- 45 usage_00788.pdb 41 AVSRL-- 45 usage_00789.pdb 41 AVSRL-- 45 usage_00790.pdb 43 AVSRL-- 47 usage_01002.pdb 39 LSRL--- 42 usage_01131.pdb 40 LCRVR-- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################