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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:24:54 2021
# Report_file: c_0392_13.html
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#====================================
# Aligned_structures: 15
#   1: usage_00008.pdb
#   2: usage_00041.pdb
#   3: usage_00060.pdb
#   4: usage_00061.pdb
#   5: usage_00072.pdb
#   6: usage_00145.pdb
#   7: usage_00174.pdb
#   8: usage_00209.pdb
#   9: usage_00214.pdb
#  10: usage_00221.pdb
#  11: usage_00222.pdb
#  12: usage_00223.pdb
#  13: usage_00224.pdb
#  14: usage_00225.pdb
#  15: usage_00226.pdb
#
# Length:         93
# Identity:        3/ 93 (  3.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     12/ 93 ( 12.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/ 93 ( 37.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  -IVLTQSP---ASLAVSLGQRATISCRASESVDNY-GFSFMNWFQQKPGQPPKLLIY-A-   53
usage_00041.pdb         1  --ELTQSP---AIMSAPPGEKATMTCSASSSV-----S-EMHWYQQKSGTSPKGLI----   45
usage_00060.pdb         1  --VLTQSP---ASLAVSLGQRATISCRASESVDYY-GKSFMNWFQQKPGQPPKLLIY-A-   52
usage_00061.pdb         1  --VLTQSP---ASLAVSLGQRATISCRASESVDYY-GKSFMNWFQQKPGQPPKLLIY-A-   52
usage_00072.pdb         1  --KPDILDPVEDTLEVELGKPLTISCKARF-GFERVFNPVIKWYIKDSDLEWEVSVPE--   55
usage_00145.pdb         1  --VMTQTP---LSLSVTPGQPASISCKSSESLRQSNGKTSLYWYRQKPGQSPQLLVF-E-   53
usage_00174.pdb         1  --PPTFSP---ALLVVTEGDNATFTCSFSNTS--E-SF-HVVWHRESPSGQTDTLAA-FP   50
usage_00209.pdb         1  DIVLTQSP---ASLAVSLGQRATISCRASESVVRY-GNSFMHWYQQKPGQPPKLLIY-R-   54
usage_00214.pdb         1  --VLTQSP---ASLAVSLGQRATISCRASESVDNY-GISFMSWFQQKPGQPPKLLIY-A-   52
usage_00221.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
usage_00222.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
usage_00223.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
usage_00224.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
usage_00225.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
usage_00226.pdb         1  --VLTQSP---GSLTVSLGQRATISCRASESVDNF-GKSFMHWYQQKPGQSPKLLIY-R-   52
                               t  p     l v  G  at  C  s             W           l     

usage_00008.pdb        54  ISNRGSGVPARFSGSG-S-G--TDFS--LNIHP   80
usage_00041.pdb        46  --------PARFSGSG-S-G--TDYS--LTISS   64
usage_00060.pdb        53  ASNQGSGVPARFSGSG-S-G--TDFS--LHIHP   79
usage_00061.pdb        53  ASNQGSGVPARFSGSG-S-G--TDFS--LHIHP   79
usage_00072.pdb        56  ---------AKSIKST-L--KDEIIERNIILEK   76
usage_00145.pdb        54  VSNRFSGVSDRFVGSG-S-G--TDFT--LRISR   80
usage_00174.pdb        51  ---EDPGQDARFRVTQLPNG--RDFH--MS---   73
usage_00209.pdb        55  ASSLESGIPTRFSGSG-S-R--TDFT--LTI--   79
usage_00214.pdb        53  ASNQGSGVPARFSGSG-S-G--TDFS--LNIHP   79
usage_00221.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
usage_00222.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
usage_00223.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
usage_00224.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
usage_00225.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
usage_00226.pdb        53  ASNREGIPARFNGSGS-G----TDFA--LTINP   78
                                                  d         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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