################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:58 2021 # Report_file: c_0004_32.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00224.pdb # 2: usage_00225.pdb # 3: usage_00226.pdb # 4: usage_00227.pdb # # Length: 324 # Identity: 47/324 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 207/324 ( 63.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 116/324 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 -IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF-NDLNIYHEGTDSFASYSSNPVEN 58 usage_00225.pdb 1 RFKNIRNIPYK-NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ------------ 47 usage_00226.pdb 1 -FKNIRNIPYK-NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ------------ 46 usage_00227.pdb 1 RFKNIRNIPYK-NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ------------ 47 fKNirniPyk nSlSdNvvsciveDkdknLWIGTn ggLNlYnpiTq usage_00224.pdb 59 GSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 118 usage_00225.pdb 48 ------------------------------------RFTSYT-------L-SNNIKAVYV 63 usage_00226.pdb 47 ------------------------------------RFTSYTLQ----GIGSNNIKAVYV 66 usage_00227.pdb 48 ------------------------------------RFTSYTLQ----GIGSNNIKAVYV 67 RFtsyt sNnikavyv usage_00224.pdb 119 D-KDKNLWIGTNDGGLNLYNPITQRFTSYTLQ-G-IGSNNIKAVYVDEKKSLVYIGTHAG 175 usage_00225.pdb 64 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD-GEGNLWLGT-LS 121 usage_00226.pdb 67 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD-GEGNLWLGT-LS 124 usage_00227.pdb 68 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD-GEGNLWLGT-LS 125 D KkslvyIGThaGGLsilhrnsgqvenfnqr s lvneNvyAilpD gegnlwlGT ls usage_00224.pdb 176 GLSILHRNSGQVENFN-QRNSQLVN-ENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTT 233 usage_00225.pdb 122 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQK 181 usage_00226.pdb 125 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQK 184 usage_00227.pdb 126 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQK 185 aLvrfnpeqrsfttie ekdgtpVv kqittlfrDshkrLWiGgeegLsvFkqEgldiqk usage_00224.pdb 234 IEK-EKDGTPV--VSKQITTLFRDSHKRLWIGGEEGLSVFK------------------- 271 usage_00225.pdb 182 ASILPVS----NVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQIKRYNTTNGLPNNV 237 usage_00226.pdb 185 ASILPVS----NVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQIKRYNTTNGLPNNV 240 usage_00227.pdb 186 ASILPVS----NVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQIKRYNTTNGLPNNV 241 asi pvs tklftnciyeaSngiiWvGtrEGfycFn usage_00224.pdb ------------------------ usage_00225.pdb 238 VYGILEDSFGRLWLSTNRGISCFN 261 usage_00226.pdb 241 VYGILEDSFGRLWLSTNRGISCFN 264 usage_00227.pdb 242 VYGILEDSFGRLWLSTNRGISCFN 265 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################