################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:57 2021 # Report_file: c_0699_49.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00340.pdb # 2: usage_00341.pdb # 3: usage_00482.pdb # 4: usage_00572.pdb # 5: usage_00573.pdb # 6: usage_00823.pdb # 7: usage_00899.pdb # # Length: 52 # Identity: 14/ 52 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 52 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 52 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00340.pdb 1 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK- 51 usage_00341.pdb 1 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK- 51 usage_00482.pdb 1 ATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQ---- 48 usage_00572.pdb 1 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKE 52 usage_00573.pdb 1 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKE 52 usage_00823.pdb 1 YYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPIKN 52 usage_00899.pdb 1 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPL-- 50 ISd G Y pnv W Lp ftneVS F q vt g a F G VTQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################