################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:59 2021 # Report_file: c_0606_9.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00035.pdb # 2: usage_00097.pdb # 3: usage_00098.pdb # 4: usage_00109.pdb # 5: usage_00140.pdb # 6: usage_00141.pdb # 7: usage_00150.pdb # 8: usage_00289.pdb # 9: usage_00290.pdb # 10: usage_00291.pdb # 11: usage_00292.pdb # 12: usage_00293.pdb # # Length: 86 # Identity: 40/ 86 ( 46.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 86 ( 55.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 86 ( 5.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00097.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00098.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00109.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00140.pdb 1 -SFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDL--SAVLGNVRSKRYSLVIEDGV 57 usage_00141.pdb 1 -SFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDL--SAVLGNVRSKRYSLVIEDGV 57 usage_00150.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00289.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00290.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00291.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00292.pdb 1 -AFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 59 usage_00293.pdb 1 DAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 60 FV WG AH A KV LADP GAF K D LD GN R KR S V DG usage_00035.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00097.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00098.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00109.pdb 60 VKALNVEPDGTGLTSLAPNIISQL-- 83 usage_00140.pdb 58 VTKVNVEPDGKGLTCSLAPNILSQLG 83 usage_00141.pdb 58 VTKVNVEPDGKGLTCSLAPNILSQLG 83 usage_00150.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00289.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00290.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00291.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00292.pdb 60 VKALNVEPDGTGLTCSLAPNIISQL- 84 usage_00293.pdb 61 VKALNVEPDGTGLTCSLAPNIISQL- 85 V NVEPDG GLTcslapnI sq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################