################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:17 2021 # Report_file: c_0185_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00008.pdb # 6: usage_00012.pdb # 7: usage_00028.pdb # 8: usage_00034.pdb # 9: usage_00071.pdb # 10: usage_00077.pdb # 11: usage_00089.pdb # # Length: 152 # Identity: 61/152 ( 40.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/152 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/152 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -SQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVAL 59 usage_00002.pdb 1 PSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVAL 60 usage_00003.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00004.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00008.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00012.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00028.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00034.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00071.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00077.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 usage_00089.pdb 1 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 60 AF Y N GI ED YPY GQ C P A I E A AVA usage_00001.pdb 60 YNPVSFAFEV-TNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWG 118 usage_00002.pdb 61 YNPVSFAFEV-TNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWG 119 usage_00003.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00004.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00008.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00012.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00028.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00034.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00071.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00077.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 usage_00089.pdb 61 VGPVSVAIDASLTSFQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWG 118 PVS A F Y KG Y SC D NHAVLAVGYG G WI KNSWG usage_00001.pdb 119 PQWGMNGYFLIERGKNMCGLAACASYP-IPLV 149 usage_00002.pdb 120 PQWGMNGYFLIERGKNMCGLAA-CASYPIPLV 150 usage_00003.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00004.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00008.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00012.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00028.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00034.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00071.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00077.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 usage_00089.pdb 119 ENWGNKGYILMARNKNNACGIANLASFPKM-- 148 WG GY L R KN A as #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################