################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:23 2021 # Report_file: c_0113_16.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00071.pdb # 10: usage_00072.pdb # 11: usage_00073.pdb # 12: usage_00074.pdb # 13: usage_00234.pdb # 14: usage_00235.pdb # 15: usage_00236.pdb # 16: usage_00237.pdb # 17: usage_00238.pdb # 18: usage_00239.pdb # # Length: 99 # Identity: 52/ 99 ( 52.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 99 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 99 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00049.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00050.pdb 1 G--------------------IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 40 usage_00051.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00067.pdb 1 -D------VDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 53 usage_00068.pdb 1 -------------------GIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 41 usage_00069.pdb 1 --------AKIGH------GIMFDHATGIVVGETSVIENDVSILQGVTLGGT-------H 39 usage_00070.pdb 1 --------AKIGH------GIMFDHATGIVVGETSVIENDVSILQGVTLGGT-----DRH 41 usage_00071.pdb 1 --------AKIGH------GIMFDHATGIVVGETSVIENDVSILQGVTLGGT----GDRH 42 usage_00072.pdb 1 --------AKIGR------G-ILDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRH 45 usage_00073.pdb 1 --------AKIGR------G-ILDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRH 45 usage_00074.pdb 1 --------AKIGR------G-ILDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRH 45 usage_00234.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00235.pdb 1 -DVDIHPAAKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 52 usage_00236.pdb 1 G--------------------IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 40 usage_00237.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00238.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 usage_00239.pdb 1 --------AKIGH------G-IFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRH 45 DHATGIVVGET VIENDVSILQ VTLGGT H usage_00048.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00049.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00050.pdb 41 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLNPVPE 78 usage_00051.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00067.pdb 54 PKVREGVMIGAGAKILGNIEVGKYAKIG----------- 81 usage_00068.pdb 42 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPE 80 usage_00069.pdb 40 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLN---- 74 usage_00070.pdb 42 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLN---- 76 usage_00071.pdb 43 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLN---- 77 usage_00072.pdb 46 PKIREGV-IGAGAKILGNIEVGRGAKIGAGSVVLQ---- 79 usage_00073.pdb 46 PKIREGV-IGAGAKILGNIEVGRGAKIGAGSVVLQ---- 79 usage_00074.pdb 46 PKIREGV-IGAGAKILGNIEVGRGAKIGAGSVVLQ---- 79 usage_00234.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00235.pdb 53 PKVREGV-IGAGAKILGNIEVGKYAKIG----------- 79 usage_00236.pdb 41 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLNPVPE 78 usage_00237.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00238.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 usage_00239.pdb 46 PKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLN---- 79 PK REGV IGAGAKILGNIEVG AKIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################