################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:25:19 2021 # Report_file: c_0826_6.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00021.pdb # 7: usage_00022.pdb # 8: usage_00023.pdb # 9: usage_00024.pdb # 10: usage_00025.pdb # 11: usage_00026.pdb # 12: usage_00027.pdb # 13: usage_00028.pdb # 14: usage_00030.pdb # 15: usage_00036.pdb # 16: usage_00037.pdb # 17: usage_00038.pdb # 18: usage_00039.pdb # 19: usage_00041.pdb # 20: usage_00042.pdb # 21: usage_00043.pdb # 22: usage_00044.pdb # 23: usage_00046.pdb # 24: usage_00047.pdb # 25: usage_00048.pdb # 26: usage_00049.pdb # 27: usage_00050.pdb # 28: usage_00063.pdb # 29: usage_00071.pdb # 30: usage_00074.pdb # 31: usage_00076.pdb # 32: usage_00077.pdb # 33: usage_00082.pdb # 34: usage_00083.pdb # 35: usage_00089.pdb # 36: usage_00090.pdb # 37: usage_00091.pdb # 38: usage_00092.pdb # 39: usage_00093.pdb # 40: usage_00094.pdb # 41: usage_00095.pdb # 42: usage_00096.pdb # 43: usage_00104.pdb # 44: usage_00105.pdb # 45: usage_00108.pdb # 46: usage_00109.pdb # # Length: 62 # Identity: 24/ 62 ( 38.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 62 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 62 ( 17.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00012.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00013.pdb 1 -----DVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEE 55 usage_00019.pdb 1 ------VTGRIAQTLLNLAKQPDAMTLPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00020.pdb 1 ------VTGRIAQTLLNLAKQPDAMTLPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00021.pdb 1 NLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 60 usage_00022.pdb 1 --AFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 58 usage_00023.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00024.pdb 1 NLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 60 usage_00025.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00026.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00027.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00028.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00030.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00036.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00037.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00038.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00039.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00041.pdb 1 -----DVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQELARLVGCSREMAGRVLKKLQA 55 usage_00042.pdb 1 ------VTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQELARLVGCSREMAGRVLKKLQA 54 usage_00043.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00044.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00046.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00047.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00048.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00049.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00050.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00063.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00071.pdb 1 ---------RIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 51 usage_00074.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00076.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00077.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00082.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00083.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00089.pdb 1 -----DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00090.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00091.pdb 1 -----DLTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00092.pdb 1 -------TGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 53 usage_00093.pdb 1 -----DATGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00094.pdb 1 -----DATGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00095.pdb 1 -----DATGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 55 usage_00096.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00104.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00105.pdb 1 -LAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 59 usage_00108.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 usage_00109.pdb 1 ------VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 54 Ri TL L k P AM P G Q RQE VGCSRE GR LK L usage_00011.pdb 56 Q- 56 usage_00012.pdb 56 QN 57 usage_00013.pdb 56 QG 57 usage_00019.pdb 55 Q- 55 usage_00020.pdb 55 QN 56 usage_00021.pdb 61 QN 62 usage_00022.pdb 59 QN 60 usage_00023.pdb 60 QN 61 usage_00024.pdb 61 Q- 61 usage_00025.pdb 60 QN 61 usage_00026.pdb 60 QN 61 usage_00027.pdb 60 QN 61 usage_00028.pdb 60 QN 61 usage_00030.pdb 56 QN 57 usage_00036.pdb 56 QN 57 usage_00037.pdb 56 Q- 56 usage_00038.pdb 56 Q- 56 usage_00039.pdb 56 Q- 56 usage_00041.pdb 56 DG 57 usage_00042.pdb 55 DG 56 usage_00043.pdb 56 QN 57 usage_00044.pdb 56 QN 57 usage_00046.pdb 56 Q- 56 usage_00047.pdb 56 QN 57 usage_00048.pdb 55 Q- 55 usage_00049.pdb 56 Q- 56 usage_00050.pdb 56 QN 57 usage_00063.pdb 55 Q- 55 usage_00071.pdb -- usage_00074.pdb 55 QN 56 usage_00076.pdb 55 QN 56 usage_00077.pdb 55 Q- 55 usage_00082.pdb 56 QN 57 usage_00083.pdb 55 QN 56 usage_00089.pdb 56 Q- 56 usage_00090.pdb 55 Q- 55 usage_00091.pdb 56 Q- 56 usage_00092.pdb 54 Q- 54 usage_00093.pdb 56 Q- 56 usage_00094.pdb 56 Q- 56 usage_00095.pdb 56 Q- 56 usage_00096.pdb 55 QN 56 usage_00104.pdb 60 QN 61 usage_00105.pdb 60 QN 61 usage_00108.pdb 55 QN 56 usage_00109.pdb 55 QN 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################