################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:16 2021 # Report_file: c_0685_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00302.pdb # 2: usage_00449.pdb # 3: usage_00618.pdb # 4: usage_00619.pdb # 5: usage_00620.pdb # 6: usage_00664.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 67 ( 10.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 67 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 GWKED----GILKVKSGGAESANGGDIVTTRK------------YKNFILTVDFKITEGA 44 usage_00449.pdb 1 -----GWRMTTEMK-VLSGGM---ITNYYAN-GTQRVLPIISLDSS-GN--LVVEFEG-Q 46 usage_00618.pdb 1 -----GWRMTTEMK-VLSGGM---ITNYYAN-GTQRVLPIISLDSS-GN--LVVEFEG-Q 46 usage_00619.pdb 1 ------WRMTTEMK-VLSGGM---ITNYYAN-GTQRVLPIISLDSS-GN--LVVEFEG-Q 45 usage_00620.pdb 1 ------WQSNAKIR-IVDGAA---NQIQVAD-GSRKYVVTLSIDES-GG--LVANLNG-V 45 usage_00664.pdb 1 ------WRMTTEMK-VLSGGM---ITNYYAN-GTQRVLPIISLDSS-GN--LVVEFEG-Q 45 g a s g lv g usage_00302.pdb 45 NS----- 46 usage_00449.pdb 47 TGRTVLA 53 usage_00618.pdb 47 TGRTVLA 53 usage_00619.pdb 46 TGRTVLA 52 usage_00620.pdb 46 SAPIILQ 52 usage_00664.pdb 46 TGRTVLA 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################