################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:31:41 2021 # Report_file: c_1396_146.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00112.pdb # 2: usage_00113.pdb # 3: usage_00219.pdb # 4: usage_00370.pdb # 5: usage_00417.pdb # 6: usage_00418.pdb # 7: usage_00463.pdb # 8: usage_00464.pdb # 9: usage_00466.pdb # 10: usage_00467.pdb # 11: usage_00495.pdb # 12: usage_00496.pdb # 13: usage_00504.pdb # 14: usage_00564.pdb # 15: usage_00579.pdb # 16: usage_00590.pdb # 17: usage_00658.pdb # 18: usage_00660.pdb # 19: usage_00664.pdb # 20: usage_00736.pdb # 21: usage_00775.pdb # 22: usage_00776.pdb # 23: usage_00777.pdb # 24: usage_00778.pdb # 25: usage_00946.pdb # 26: usage_01036.pdb # 27: usage_01115.pdb # 28: usage_01292.pdb # 29: usage_01294.pdb # 30: usage_01295.pdb # 31: usage_01626.pdb # 32: usage_01662.pdb # 33: usage_01709.pdb # 34: usage_01722.pdb # # Length: 61 # Identity: 54/ 61 ( 88.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 61 ( 88.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 61 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00113.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00219.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREIL-- 58 usage_00370.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00417.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00418.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00463.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00464.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00466.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00467.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00495.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00496.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00504.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_00564.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00579.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00590.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00658.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_00660.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 59 usage_00664.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_00736.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_00775.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00776.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00777.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_00778.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_00946.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_01036.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 58 usage_01115.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_01292.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_01294.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_01295.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 59 usage_01626.pdb 1 TVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKE 60 usage_01662.pdb 1 --NDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILK- 57 usage_01709.pdb 1 -VNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREIL-- 57 usage_01722.pdb 1 -VNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILK- 58 NDI KLVGKLNWASQIYPGIKVRQL KLLRGTKALTEVIPLTEEAELELAENREIL usage_00112.pdb - usage_00113.pdb - usage_00219.pdb - usage_00370.pdb - usage_00417.pdb - usage_00418.pdb - usage_00463.pdb - usage_00464.pdb - usage_00466.pdb - usage_00467.pdb - usage_00495.pdb - usage_00496.pdb - usage_00504.pdb - usage_00564.pdb - usage_00579.pdb - usage_00590.pdb - usage_00658.pdb 61 P 61 usage_00660.pdb - usage_00664.pdb 61 P 61 usage_00736.pdb 61 P 61 usage_00775.pdb - usage_00776.pdb - usage_00777.pdb - usage_00778.pdb - usage_00946.pdb - usage_01036.pdb - usage_01115.pdb - usage_01292.pdb - usage_01294.pdb - usage_01295.pdb - usage_01626.pdb 61 P 61 usage_01662.pdb - usage_01709.pdb - usage_01722.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################