################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:10 2021 # Report_file: c_1338_62.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00182.pdb # 2: usage_00324.pdb # 3: usage_00754.pdb # 4: usage_00773.pdb # 5: usage_00816.pdb # 6: usage_00817.pdb # 7: usage_00864.pdb # 8: usage_00903.pdb # 9: usage_00910.pdb # 10: usage_00913.pdb # 11: usage_00914.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 51 ( 27.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 51 ( 68.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 D-----VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 36 usage_00324.pdb 1 -DTVKR------------ADEKLSFSK-TFPHQ-LRLILVEQIYRAFRINR 36 usage_00754.pdb 1 ------VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 35 usage_00773.pdb 1 ------VASLLRDAVKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 35 usage_00816.pdb 1 D-----VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 36 usage_00817.pdb 1 D-----VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 36 usage_00864.pdb 1 ------VVTLLKEAIHRR-----DVV-AVVNDTVGTMMTCGF--------- 30 usage_00903.pdb 1 ------VVTLLKEAIHRREEFDLDVV-AVVNDTVGTMMTCGF--------- 35 usage_00910.pdb 1 ------VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 35 usage_00913.pdb 1 ------VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 35 usage_00914.pdb 1 D-----VVTLLRDAIKRREEFDLDVV-AVVNDTVGTMMTCAY--------- 36 dvv vvndt gtmmtc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################