################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:28 2021 # Report_file: c_0473_31.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00276.pdb # 2: usage_00277.pdb # 3: usage_00293.pdb # 4: usage_00294.pdb # 5: usage_00295.pdb # 6: usage_00304.pdb # 7: usage_00314.pdb # 8: usage_00329.pdb # # Length: 84 # Identity: 36/ 84 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 84 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 84 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00276.pdb 1 RVCLNVLAGSKDNARAIYQAAEGHVLVGVLSKNYPDVDSAVKDREYAALIDNALSVGLGA 60 usage_00277.pdb 1 RVCLNVLAGSKDNARAIYQAAEGHVLVGVLSKNYPDVDSAVKDREYAALIDNALSVGLGA 60 usage_00293.pdb 1 RVCLNVLAGSKDNAREIYDAAEGHVLVGVLSKNYPDVASAVVDRDYAKLIDNALSVGLGA 60 usage_00294.pdb 1 RVCLNVLAGSKDNAREIYDAAEGHVLVGVLSKNYPDVASAVVDRDYAKLIDNALSVGLGA 60 usage_00295.pdb 1 RVCLNVLAGSKDNAREIYDAAEGHVLVGVLSKNYPDVASAVVDRDYAKLIDNALSVGLGA 60 usage_00304.pdb 1 RVALNVLANNIENAKDIFEAAEGYVVVGVLSKDYPTVEEAVTAKAYGKEIDDAVSIGLGA 60 usage_00314.pdb 1 RVALNVLANNIENAKDIFEAAEGYVVVGVLSKDYPTVEEAVTAKAYGKEIEDAVSIGLGA 60 usage_00329.pdb 1 RVCLNVLAGSVDNAADIYDAAEGHVLVGVLSKNYPDVDTAVEDKKYSEVTNNAVSVGLGA 60 RV LNVLA NA I AAEG V VGVLSK YP V AV Y i A S GLGA usage_00276.pdb 61 GDPRQSVVSQISQQVQPQHVNQV- 83 usage_00277.pdb 61 GDPRQSVVSQISQQVQPQHVNQV- 83 usage_00293.pdb 61 GDPNQSAVSEISRQVQPQ------ 78 usage_00294.pdb 61 GDPNQSAVSEISRQVQPQ------ 78 usage_00295.pdb 61 GDPNQSAVSEISRQVQPQHVNQV- 83 usage_00304.pdb 61 GDNRQAAVVAEIAKHYSGSHINQV 84 usage_00314.pdb 61 GDNRQAAVVAEIAKHYPGSHINQ- 83 usage_00329.pdb 61 GDPNQSVSLISQHVQPQHINQ-V- 82 GD Q v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################