################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:32 2021 # Report_file: c_1462_121.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00058.pdb # 2: usage_00372.pdb # 3: usage_00547.pdb # 4: usage_00674.pdb # 5: usage_00675.pdb # 6: usage_00796.pdb # 7: usage_01540.pdb # 8: usage_02157.pdb # 9: usage_02171.pdb # 10: usage_02540.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 44 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 44 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 --FTTVITPRVSETDGVGHINNTTVPVWFEAGRHEIFKLFTP-- 40 usage_00372.pdb 1 -PVRVRVDVRFRDLDPLGHVNNAVFLSYELARIRYFQRIS---- 39 usage_00547.pdb 1 GTFTYERQVYLADTDGAGVVYFNQFLQMCHEAYESWLSSE--H- 41 usage_00674.pdb 1 --FRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRH----- 37 usage_00675.pdb 1 TLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRH----- 39 usage_00796.pdb 1 --YVFEDVVRIYDTDAQGIAHYAAYYRFFTNTIEKFIKEK--VG 40 usage_01540.pdb 1 -ESVTRIKVRYAETDQMGVVHHSVYAVYLEAARVDFLERA--G- 40 usage_02157.pdb 1 TLFRWPVRVYYEDTAAGGVVYHASYVAFYERARTEMLRH----- 39 usage_02171.pdb 1 --HQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGL------- 35 usage_02540.pdb 1 KIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVI------- 37 d g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################