################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:33 2021 # Report_file: c_0682_67.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00234.pdb # 2: usage_00393.pdb # 3: usage_00396.pdb # # Length: 58 # Identity: 4/ 58 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 58 ( 60.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 58 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 TT--G-AKSATVELLTSSDVKNRVSAKVQGKENAF---GIINGYDSDTKLLELK---- 48 usage_00393.pdb 1 --THFPKSSIGIENELAG-LVVAMPA-----NSAQKFGYVKS----AQGDALF-MLTK 45 usage_00396.pdb 1 --THFPKSSIGIENELAG-LVVAMPA-----NSAQKFGYVKS----AQGDALF-MLTK 45 f ksSigiEnelag lvvampA nsAq yvks aqgdalf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################