################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:32:08 2021 # Report_file: c_0147_11.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00124.pdb # 4: usage_00131.pdb # 5: usage_00132.pdb # 6: usage_00133.pdb # 7: usage_00153.pdb # 8: usage_00154.pdb # 9: usage_00249.pdb # 10: usage_00250.pdb # 11: usage_00253.pdb # 12: usage_00289.pdb # 13: usage_00408.pdb # 14: usage_00418.pdb # 15: usage_00478.pdb # 16: usage_00514.pdb # 17: usage_00515.pdb # 18: usage_00516.pdb # 19: usage_00517.pdb # 20: usage_00526.pdb # 21: usage_00527.pdb # 22: usage_00528.pdb # 23: usage_00529.pdb # 24: usage_00580.pdb # 25: usage_00612.pdb # 26: usage_00613.pdb # 27: usage_00614.pdb # 28: usage_00615.pdb # 29: usage_00647.pdb # 30: usage_00700.pdb # 31: usage_00701.pdb # 32: usage_00725.pdb # 33: usage_00726.pdb # # Length: 141 # Identity: 19/141 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/141 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/141 ( 24.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -VHLSQSGAAVTKPGASVRVSCEASGYKIS-----DHFIHWWRQAPGQGLQWVGWINPKT 54 usage_00022.pdb 1 -VHLSQSGAAVTKPGASVRVSCEASGYKIS-----DHFIHWWRQAPGQGLQWVGWINPKT 54 usage_00124.pdb 1 -VRLVQSGNQVRKPGASVRISCEASGYKFI-----DHFIHWVRQVPGHGLEWLGWINPRG 54 usage_00131.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00132.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00133.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00153.pdb 1 QVQLVQSGAEVKKPGASVKVSCKASGYYTE-----AYYIHWVRQAPGQGLEWMGRIDPAT 55 usage_00154.pdb 1 QVQLVQSGAEVKKPGASVKVSCKASGYYTE-----AYYIHWVRQAPGQGLEWMGRIDPAT 55 usage_00249.pdb 1 -VQLVQSGAAVRKPGASVTVSCKFA-E---DDPAPEHFIHFLRQAPGQQLEWLAWMNPTN 55 usage_00250.pdb 1 -VQLVQSGAAVRKPGASVTVSCKFA-E---DD-APEHFIHFLRQAPGQQLEWLAWMNPTN 54 usage_00253.pdb 1 -VHLMQSGTEMKKPGASVRVTCQTSGYTFS-----DYFIHWLRQVPGRGFEWMGWMNPQW 54 usage_00289.pdb 1 -VQLVQSGAEVKKPGESLKISCKGSGYSFT-----SYWIGWVRQAPGQGLEWMGWISAYN 54 usage_00408.pdb 1 -VQLVESGGEVKQPGQSLKISCKSSGYNFL-----DSWIGWVRQIPGKGLEWIGIIYPDD 54 usage_00418.pdb 1 -VQLVQSGAEVKKPGESLKISCKGSGYIFT-----NYWIAWVRQMPGKGLESMGIIYPGD 54 usage_00478.pdb 1 -VRLRQSGAGFKKPGASVRVSCEASGYTFI-----KYYLHWIRQVPGGHPEWIGWINPRG 54 usage_00514.pdb 1 -EVLVQSGAEVKKPGASVKVSCRAFGYTFT-----GNALHWVRQAPGQGLEWLGWINPHS 54 usage_00515.pdb 1 -EVLVQSGAEVKKPGASVKVSCRAFGYTFT-----GNALHWVRQAPGQGLEWLGWINPHS 54 usage_00516.pdb 1 -EVLVQSGAEVKKPGASVKVSCRAFGYTFT-----GNALHWVRQAPGQGLEWLGWINPHS 54 usage_00517.pdb 1 --QLVQSGTAVKRPGASVRVSCQASGYTFT-----DYFIYWWRQAPGQGLEWLGWINPLT 53 usage_00526.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00527.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00528.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00529.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00580.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00612.pdb 1 -AHLVQSGTAMKKPGASVRVSCQTSGYTFT-----AHILFWFRQAPGRGLEWVGWIKPQY 54 usage_00613.pdb 1 -AHLVQSGTAMKKPGASVRVSCQTSGYTFT-----AHILFWFRQAPGRGLEWVGWIKPQY 54 usage_00614.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00615.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 usage_00647.pdb 1 -VQFVQSGAEVKKPGASVRVSCEASGYSFT-----DYVLQWIRQAPGQRPEWMGWIKPER 54 usage_00700.pdb 1 -VQLVQSGAEVKKPGASVRVSCKASGYTFT-----SYFMHWVRQAPGQGLEWMAITYPGG 54 usage_00701.pdb 1 -VQLVQSGAEVKKPGASVRVSCKASGYTFT-----SYFMHWVRQAPGQGLEWMAITYPGG 54 usage_00725.pdb 1 --QLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 53 usage_00726.pdb 1 -VQLVQSGAEVKKPGASVKVSCKASGYTFT-----GYYMHWVRQAPGQGLEWMGWINPNS 54 l qSG PG S sC RQ PG w p usage_00021.pdb 55 GQPNNARQFQGR--VSLTRQASWDFDTYSFYMDLKAVRSDDTAIYFCARQRS--D----- 105 usage_00022.pdb 55 GQPNNARQFQGR--VSLTRQASWDFDTYSFYMDLKAVRSDDTAIYFCARQRS--D----- 105 usage_00124.pdb 55 GGVNYSRSFQGKLSMTMTRDNF---E-ETAYLDLSKLNPGDTAVYFCARGFA--G--Y-- 104 usage_00131.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARGKN--CD-Y-- 103 usage_00132.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARGKN-------- 100 usage_00133.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARGKN--SD-Y-- 103 usage_00153.pdb 56 GNTKYAPRLQDR--VTMTRDTS---T-STVYMELSSLRSEDTAVYYCASLYS-------- 101 usage_00154.pdb 56 GNTKYAPRLQDR--VTMTRDTS---T-STVYMELSSLRSEDTAVYYCASLYS-------- 101 usage_00249.pdb 56 GAVNYAWYLNGR--VTATRDRS---M-TTAFLEVKSLRSDDTAVYYCARAQK--RG-R-- 104 usage_00250.pdb 55 GAVNYAWYLNGR--VTATRDRS---M-TTAFLEVKSLRSDDTAVYYCARAQK--RG-R-- 103 usage_00253.pdb 55 GQVNYARTFQGR--VTMTRDVY---R-EVAYLDLRSLTFADTAVYFCARRMR--SQ-D-- 103 usage_00289.pdb 55 GNTNYAQKLQGR--VTMTTDTS---T-STAYMELRSLRSDDTAVYYCAREGD-------- 100 usage_00408.pdb 55 SDAHYSPSFEGQ--VTMSVDKS---I-STAYLQWTTLQASDTGKYFCTRLYLFE-G-A-- 104 usage_00418.pdb 55 SDIRYSPSFQGQ--VTISADKS---I-TTAYLQWSSLKASDTAMYYCARHDI-------- 100 usage_00478.pdb 55 GQVNYSRQFPGK--FTMTRDTI---R-ETAYLDVRGLTSDDTAVYYCVRTAD--CERDPC 106 usage_00514.pdb 55 GDTTTSQKFQGR--VYMTRDKS---I-NTAFLDVTRLTSDDTGIYYCARDKY--YG-N-- 103 usage_00515.pdb 55 GDTTTSQKFQGR--VYMTRDKS---I-NTAFLDVTRLTSDDTGIYYCARDKY--YG-N-- 103 usage_00516.pdb 55 GDTTTSQKFQGR--VYMTRDKS---I-NTAFLDVTRLTSDDTGIYYCARDKY--YG-N-- 103 usage_00517.pdb 54 SQPSYPSRFQGR--LTLTRDTF---D-EMLYMDLRGLRSDDTGIYFCARRHS--D----- 100 usage_00526.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCAKISG-------- 100 usage_00527.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCAKISG-------- 100 usage_00528.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCAKISG-------- 100 usage_00529.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCAKISG-------- 100 usage_00580.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARRGS--CD-Y-- 103 usage_00612.pdb 55 GAVNFGGGFRDR--VTLTRDVY---R-EIAYMDIRGLKPDDTAVYYCARDRS--YG-D-- 103 usage_00613.pdb 55 GAVNFGGGFRDR--VTLTRDVY---R-EIAYMDIRGLKPDDTAVYYCARDRS--YG-D-- 103 usage_00614.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARDGW--YS-S-- 103 usage_00615.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARDGW--S----- 101 usage_00647.pdb 55 GAVSYAPQFQGR--LTLTRDLY---T-ETAYMHFKNLRSDDTAIYYCARGVR--RD-A-- 103 usage_00700.pdb 55 GSPSYAPQFQGR--LTMTDDTS---A-TTVYMDLSDLTSKDTAVYYCARGAH--RS-I-- 103 usage_00701.pdb 55 GSPSYAPQFQGR--LTMTDDTS---A-TTVYMDLSDLTSKDTAVYYCARGAH--RS-I-- 103 usage_00725.pdb 54 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARERS--D----- 100 usage_00726.pdb 55 GGTNYAQKFQGR--VTMTRDTS---I-STAYMELSRLRSDDTAVYYCARERS--D----- 101 DT Y C usage_00021.pdb 106 --F---WDFDVWGSGTQVTVS 121 usage_00022.pdb 106 --F---WDFDVWGSGTQVTVS 121 usage_00124.pdb 105 --E---WS-FIWGQGTLVIVS 119 usage_00131.pdb 104 --N---WDFQHWGQGTLVTVS 119 usage_00132.pdb 101 ------WDFQHWGQGTLVTVS 115 usage_00133.pdb 104 --N---WDFQHWGQGTLVTVS 119 usage_00153.pdb 102 --LP-----VYWGQGTTVTV- 114 usage_00154.pdb 102 --LP-----VYWGQGTTVTV- 114 usage_00249.pdb 105 S-E---WAYAHWGQGTPVVVS 121 usage_00250.pdb 104 S-E---WAYAHWGQGTPVVVS 120 usage_00253.pdb 104 R-E---WDFQHWGQGTRIIVS 120 usage_00289.pdb 101 ------GAFDYWGQGTLVTVS 115 usage_00408.pdb 105 QSS---NAFDLWGQGTMILVS 122 usage_00418.pdb 101 ------EGFDYWGRGTLVTVS 115 usage_00478.pdb 107 K-G---WVFPHWGQGTLVIVS 123 usage_00514.pdb 104 E-A---VGMDVWGQGTSVTVS 120 usage_00515.pdb 104 E-A---VGMDVWGQGTSVTVS 120 usage_00516.pdb 104 E-A---VGMDVWGQGTSVTVS 120 usage_00517.pdb 101 --Y---CDFDIWGSGTQIIVS 116 usage_00526.pdb 101 --S---YSFDYWGQGTLVTVS 116 usage_00527.pdb 101 --S---YSFDYWGQGTLVTVS 116 usage_00528.pdb 101 --S---YSFDYWGQGTLVTVS 116 usage_00529.pdb 101 --S---YSFDYWGQGTLVTVS 116 usage_00580.pdb 104 --C-GDFPWQYWGQGTVVVVS 121 usage_00612.pdb 104 S-S---WALDAWGQGTTVVVS 120 usage_00613.pdb 104 S-S---WALDAWGQGTTVVVS 120 usage_00614.pdb 104 --G---WYFDSWGQGTLVTVS 119 usage_00615.pdb 102 --G---WYFDSWGQGTLVTVS 117 usage_00647.pdb 104 --S---WWLQFWGQGTLVTVS 119 usage_00700.pdb 104 G-T---TPLDSWGQGTLVTVS 120 usage_00701.pdb 104 G-T---TPLDSWGQGTLVTVS 120 usage_00725.pdb 101 --F---WDFDLWGRGTLVTVS 116 usage_00726.pdb 102 --F---WDFDLWGRGTLVTVS 117 WG GT V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################