################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:47 2021 # Report_file: c_1117_83.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00085.pdb # 2: usage_00120.pdb # 3: usage_00476.pdb # 4: usage_00764.pdb # # Length: 66 # Identity: 13/ 66 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 66 ( 56.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 66 ( 43.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 --------SSA-VKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMF 51 usage_00120.pdb 1 --------SSA-VKAELRQYFRNLCSDDTP-VRRAAASKLGEFAKVLELDNVKSEIIPFS 50 usage_00476.pdb 1 --------SSA-VKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMF 51 usage_00764.pdb 1 LGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL------------- 47 ssa VKaElrqyFrNLcSDdtp VRraAasklgefAkvL usage_00085.pdb 52 SNLASD 57 usage_00120.pdb 51 NLA-SD 55 usage_00476.pdb 52 SNLASD 57 usage_00764.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################