################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:58 2021 # Report_file: c_1117_33.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00133.pdb # 2: usage_00135.pdb # 3: usage_00304.pdb # 4: usage_00440.pdb # 5: usage_00442.pdb # # Length: 97 # Identity: 82/ 97 ( 84.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/ 97 ( 85.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 97 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEA 60 usage_00135.pdb 1 DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEA 60 usage_00304.pdb 1 DVDGLDRTAGAIRGRAARVIHVVTSE-DNYEPGVYTEKVLEATKLLSNTV-PRFTEQVEA 58 usage_00440.pdb 1 DVDGLDRTAGAIRGRAARVIHVVTSE-DN---GVYTEKVLEATKLLSNTV-PRFTEQVEA 55 usage_00442.pdb 1 DVDGLDRTAGAIRGRAARVIHVVTSE-DNYEPGVYTEKVLEATKLLSNTV-PRFTEQVEA 58 DVDGLDRTAGAIRGRAARVIHVVTSE DN GVYTEKVLEATKLLSNTV PRFTEQVEA usage_00133.pdb 61 AVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVL 97 usage_00135.pdb 61 AVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVL 97 usage_00304.pdb 59 AVEALSSDP-AQPDENEFIDASRLVYDGIRDIRKAVL 94 usage_00440.pdb 56 AVE-A--------DENEFIDASRLVYDGIRDIRKAVL 83 usage_00442.pdb 59 AVEALSS------DENEFIDASRLVYDGIRDIRKAVL 89 AVE l DENEFIDASRLVYDGIRDIRKAVL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################