################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:29 2021 # Report_file: c_0470_34.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00021.pdb # 2: usage_00023.pdb # 3: usage_00027.pdb # 4: usage_00030.pdb # 5: usage_00097.pdb # 6: usage_00098.pdb # 7: usage_00099.pdb # 8: usage_00166.pdb # 9: usage_00363.pdb # 10: usage_00371.pdb # 11: usage_00372.pdb # 12: usage_00543.pdb # 13: usage_00564.pdb # 14: usage_00584.pdb # # Length: 84 # Identity: 3/ 84 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 84 ( 9.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 84 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00023.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00027.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00030.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00097.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00098.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00099.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETKA--- 50 usage_00166.pdb 1 -KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV---NAPGVTADI--S-HMDTGA--- 50 usage_00363.pdb 1 --IAIL-GAGSWGTALALVLARKG-Q-KVRLWSYESD-HVDEMQAEGVNNRYLPNYPFPE 54 usage_00371.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETRA--- 50 usage_00372.pdb 1 -KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA---HTPGVAADL--S-HIETRA--- 50 usage_00543.pdb 1 -KVAVVGATGNVGIYAVQFAKLLG-G-EVYAISRRKAKV-ESILKSA--G-----AD--- 46 usage_00564.pdb 1 -KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV---NAPGVTADI--S-HMDTGA--- 50 usage_00584.pdb 1 MRVALLGGTGNLGKGLALRLATLG-H-EIVVGSRREE-KAEAKAAEY--R-RIAGDA--- 51 vA l G G l a usage_00021.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00023.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00027.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00030.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00097.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00098.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00099.pdb 51 AVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00166.pdb 51 VVRGFLGQQQLEAALTGMDLIIVP 74 usage_00363.pdb 55 TLKAYC---DLKASLEGVTDILIV 75 usage_00371.pdb 51 TVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00372.pdb 51 TVKGYLGPEQLPDCLKGCDVVVIP 74 usage_00543.pdb 47 AV---LTPDEAKSAAP-FDVVLDP 66 usage_00564.pdb 51 VVRGFLGQQQLEAALTGMDLIIVP 74 usage_00584.pdb 52 SITGM----KNEDAAEACDIAVL- 70 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################