################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:13 2021 # Report_file: c_1377_169.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00012.pdb # 2: usage_00260.pdb # 3: usage_00361.pdb # 4: usage_00362.pdb # 5: usage_00363.pdb # 6: usage_00543.pdb # 7: usage_00544.pdb # 8: usage_00789.pdb # 9: usage_01371.pdb # 10: usage_01374.pdb # 11: usage_01401.pdb # 12: usage_01406.pdb # 13: usage_01407.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 41 ( 53.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GISD----LATL---SMEEV---DK-SKHNKDDIDVRL--- 27 usage_00260.pdb 1 ---GYDAATQLS----AQDA---LN-NADSYALYAN-AIEL 29 usage_00361.pdb 1 GQAAAKSLATMD----PDKA---VM-NADNHEYFSE-N--- 29 usage_00362.pdb 1 GQAAAKSLATMD----PDKA---VM-NADNHEYFSE-N--- 29 usage_00363.pdb 1 -QAAAKSLATMD----PDKA---VM-NADNHEYFSE-N--- 28 usage_00543.pdb 1 -QANARNLAKTD----PVKA---LN-NADNHEYFAE-N--- 28 usage_00544.pdb 1 -QANARNLAKTD----PVKA---LN-NADNHEYFAE-N--- 28 usage_00789.pdb 1 --SI----ARDI----PS--FGADG-APLLWTLHEL----- 23 usage_01371.pdb 1 GQAAAKSLATMD----PDKA---VM-NADNHEYFSE-N--- 29 usage_01374.pdb 1 GQAAAKSLATMD----PDKA---VM-NADNHEYFSE----- 28 usage_01401.pdb 1 ---GATIVKEMEIQH-PAAK---LLVEAAKAQDSEV----- 29 usage_01406.pdb 1 GQANARNLAKTD----PVKA---LN-NADNHEYFAE-N--- 29 usage_01407.pdb 1 -QANARNLAKTD----PVKA---LN-NADNHEYFAE-N--- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################