################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:34 2021 # Report_file: c_1212_104.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00611.pdb # 2: usage_00612.pdb # 3: usage_01124.pdb # 4: usage_01354.pdb # # Length: 63 # Identity: 3/ 63 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 63 ( 25.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 63 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00611.pdb 1 -GIVFVPAFSGLLAPYWDPS-A-RGTIVGMTLKTTRAHVIRAALQAIALQLNDVVGSMKR 57 usage_00612.pdb 1 -GIVFVPAFSGLLAPYWDPS-A-RGTIVGMTLKTTRAHVIRAALQAIALQLNDVVGSMKR 57 usage_01124.pdb 1 -EVYLVPAFTGLGAPHWDPD-A-RGAIFGT-RNT-GPAEFARAAL--------------- 40 usage_01354.pdb 1 EPVWFLPYLS----------PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHA 50 fvPafs a rG i G t raal usage_00611.pdb 58 DAG 60 usage_00612.pdb 58 D-- 58 usage_01124.pdb --- usage_01354.pdb 51 CG- 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################