################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:57 2021 # Report_file: c_0835_95.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00559.pdb # 2: usage_00560.pdb # 3: usage_00561.pdb # 4: usage_00562.pdb # 5: usage_00563.pdb # 6: usage_00564.pdb # 7: usage_00565.pdb # 8: usage_01267.pdb # # Length: 73 # Identity: 8/ 73 ( 11.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 73 ( 64.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 73 ( 35.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00559.pdb 1 ---DWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 52 usage_00560.pdb 1 ----WIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 51 usage_00561.pdb 1 --TDWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 53 usage_00562.pdb 1 --TDWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 53 usage_00563.pdb 1 ---DWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 52 usage_00564.pdb 1 --TDWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 53 usage_00565.pdb 1 ---DWIGFLKSLKSLIPEVKE---KSILVLGA--GGASRAVIYALVKEGAKVFLWNRTKE 52 usage_01267.pdb 1 EMEIAKELDRVIGRA------PGRVFVTTFA-SHIHRIQSVIWAAEKYGRKVAME---GR 50 wigflkslksl ksilvlg ggasraVIyAlvKeGaKVflw ke usage_00559.pdb 53 KAIKLAQKFP--- 62 usage_00560.pdb 52 KAIKLAQKFP--- 61 usage_00561.pdb 54 KAIKLAQKFP--- 63 usage_00562.pdb 54 KAIKLA------- 59 usage_00563.pdb 53 KAIKLA------- 58 usage_00564.pdb 54 KAIKLAQKFP--- 63 usage_00565.pdb 53 KAIKLA------- 58 usage_01267.pdb 51 SMLKFSRIALELG 63 kaiKla #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################