################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:44 2021 # Report_file: c_0224_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00011.pdb # 2: usage_00027.pdb # 3: usage_00074.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # 6: usage_00108.pdb # 7: usage_00115.pdb # 8: usage_00119.pdb # # Length: 135 # Identity: 74/135 ( 54.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/135 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/135 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 PLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHARHLEVQILADQ 60 usage_00027.pdb 1 PLMIKASE--G-KGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHARHLEVQILADQ 57 usage_00074.pdb 1 PLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHARHLEVQILADQ 60 usage_00106.pdb 1 PVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQ 60 usage_00107.pdb 1 PVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQ 60 usage_00108.pdb 1 PLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHARHLEVQILADQ 60 usage_00115.pdb 1 PVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQ 60 usage_00119.pdb 1 PVMIKASE------IRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQ 54 P MIKASE IR DF L Q E PGSPIF M LA RHLEVQ LADQ usage_00011.pdb 61 YGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 120 usage_00027.pdb 58 YGNAVSLFGRDCSIQ---QKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 114 usage_00074.pdb 61 YGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 120 usage_00106.pdb 61 YGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYL 120 usage_00107.pdb 61 YGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYL 120 usage_00108.pdb 61 YGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 120 usage_00115.pdb 61 YGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYL 120 usage_00119.pdb 55 YGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYL 114 YG SLFGRDCS Q QKI EEAP TIA F ME A L K VGYVSAGTVEYL usage_00011.pdb 121 YSQDGSFHF------ 129 usage_00027.pdb 115 YSQ------------ 117 usage_00074.pdb 121 YSQ------------ 123 usage_00106.pdb 121 YSQDGSFYF------ 129 usage_00107.pdb 121 YSQ------------ 123 usage_00108.pdb 121 YSQDGSFHFLELNPR 135 usage_00115.pdb 121 YSHDDGKFYF----- 130 usage_00119.pdb 115 YSHD----------- 118 YS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################