################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:35 2021 # Report_file: c_1068_19.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00102.pdb # 2: usage_00212.pdb # 3: usage_00213.pdb # 4: usage_00214.pdb # 5: usage_00215.pdb # 6: usage_00458.pdb # 7: usage_00459.pdb # 8: usage_00460.pdb # 9: usage_00509.pdb # # Length: 92 # Identity: 62/ 92 ( 67.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 92 ( 68.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 92 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 ----------------LAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 44 usage_00212.pdb 1 ---------------ALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 45 usage_00213.pdb 1 --------------KALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 46 usage_00214.pdb 1 ---TEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 57 usage_00215.pdb 1 ----EELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 56 usage_00458.pdb 1 SGGTEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 60 usage_00459.pdb 1 ------LIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 54 usage_00460.pdb 1 ----------------------LSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVW 38 usage_00509.pdb 1 ----------------LAREAALSKIGELASEIFAEFTEGKYSEVVVRA----VRLFVVW 40 LSKIGELASEIFAEFTEGKYSEVVVRA VRLFVVW usage_00102.pdb 45 EGKERPLTFLSGGERIALGLAFRLAMSLYL-- 74 usage_00212.pdb 46 EGKERPLTFLSGGERIALGLAFELAMSLYL-- 75 usage_00213.pdb 47 EGKERPLTFLSGGERIALGLAFELAMSLYL-- 76 usage_00214.pdb 58 EGKERPLTFLSGGERIALGLAFELAMSLYL-- 87 usage_00215.pdb 57 EGKERPLTFLSGGERIALGLAFELAMSLYL-- 86 usage_00458.pdb 61 EGKERPLTFLSGGERIALGLAFRLAMSLYL-- 90 usage_00459.pdb 55 EGKERPLTFLSGGERIALGLAFRLAMSLYL-- 84 usage_00460.pdb 39 EGKERPLTFLSGGERIALGLAFRLAMSLYLA- 69 usage_00509.pdb 41 EGKERPLTFLRGGERIALGLAFRLAMSLYLAG 72 EGKERPLTFLsGGERIALGLAF LAMSLYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################