################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:14 2021 # Report_file: c_0835_121.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00484.pdb # 2: usage_01089.pdb # 3: usage_01329.pdb # 4: usage_01330.pdb # # Length: 68 # Identity: 12/ 68 ( 17.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 68 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 68 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00484.pdb 1 -EKVVEKLKD-LA-KKGELLIASDMDREGEAIAWHIARVTNTLGR--K-NRIVFSEITPR 54 usage_01089.pdb 1 KTETLRALREIS-LEADEILVATDPDVEGEKISWDVTQYLL--PSTRSLRRIEMHEITRY 57 usage_01329.pdb 1 SRSRIEALRKLA-HDAEFVIVGTDPDTEGEKIAWDLKNLLS--GCG-AVKRAEFHEVTRR 56 usage_01330.pdb 1 SRSRIEALRKLA-HDAEFVIVGTDPDTEGEKIAWDLKNLLS--GCG-AVKRAEFHEVTRR 56 eaLr a v tDpD EGEkIaWd l g R efhE Trr usage_00484.pdb 55 VIREAVKN 62 usage_01089.pdb 58 GFKKARES 65 usage_01329.pdb 57 AILEALES 64 usage_01330.pdb 57 AILEALES 64 i eA es #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################