################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:02 2021 # Report_file: c_0796_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00027.pdb # 2: usage_00052.pdb # 3: usage_00101.pdb # 4: usage_00107.pdb # 5: usage_00108.pdb # 6: usage_00109.pdb # 7: usage_00113.pdb # 8: usage_00152.pdb # 9: usage_00153.pdb # 10: usage_00154.pdb # 11: usage_00155.pdb # 12: usage_00156.pdb # 13: usage_00157.pdb # 14: usage_00158.pdb # 15: usage_00159.pdb # 16: usage_00164.pdb # # Length: 91 # Identity: 45/ 91 ( 49.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 91 ( 52.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 91 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 GSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAE-GIYPAVDPLASTSRALAPE 59 usage_00052.pdb 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 60 usage_00101.pdb 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 60 usage_00107.pdb 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 60 usage_00108.pdb 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 60 usage_00109.pdb 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 60 usage_00113.pdb 1 ------QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPR 54 usage_00152.pdb 1 ------QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 54 usage_00153.pdb 1 ------QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 54 usage_00154.pdb 1 ------QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 54 usage_00155.pdb 1 ------QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 54 usage_00156.pdb 1 GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAA 60 usage_00157.pdb 1 GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAA 60 usage_00158.pdb 1 ---TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAA 57 usage_00159.pdb 1 GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAA 60 usage_00164.pdb 1 ------QAIYVPADDYTDPAPATTFAHLDATTNLERKLAEMGIYPAVDPLASTSRILSPA 54 QA YVPADD TDP PATTFaHLDAT L R GIYPAVDPL S Sr usage_00027.pdb 60 IVGEEHYQVARKVQQTLQRYKELQDIIAI-- 88 usage_00052.pdb 61 IVGSEHYDVARGVQKILQDYKSLQDIIA--- 88 usage_00101.pdb 61 IVGSEHYDVARGVQKILQDYKSLQ------- 84 usage_00107.pdb 61 IVGSEHYDVARGVQKILQDYKSLQDIIAI-- 89 usage_00108.pdb 61 IVGSEHYDVARGVQKILQDYKSLQDIIAI-- 89 usage_00109.pdb 61 IVGSEHYDVARGVQKILQDYKSLQDIIAIL- 90 usage_00113.pdb 55 IVGEEHYEIAQRVKETLQRYKELQDIIAIL- 84 usage_00152.pdb 55 VVGQEHYDTARGVQSILQRYQELKDIIAI-- 83 usage_00153.pdb 55 VVGQEHYDTARGVQSILQRYQELKDIIAI-- 83 usage_00154.pdb 55 VVGQEHYDTARGVQSILQRYQELKDIIAI-- 83 usage_00155.pdb 55 VVGQEHYDTARGVQSILQRYQELKDIIAI-- 83 usage_00156.pdb 61 VVGQEHYDVASKVQETLQTYKSLQDIIAI-- 89 usage_00157.pdb 61 VVGQEHYDVASKVQETLQTYKSLQ------- 84 usage_00158.pdb 58 VVGQEHYDVASKVQETLQTYKSLQDIIAI-- 86 usage_00159.pdb 61 VVGQEHYDVASKVQETLQTYKSLQDIIAI-- 89 usage_00164.pdb 55 VVGEEHYRVARGVQQVLQRYNDLQDIIAILG 85 VG EHY A Vq LQ Y L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################