################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:37 2021 # Report_file: c_0952_216.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00125.pdb # 2: usage_00384.pdb # 3: usage_00666.pdb # 4: usage_01560.pdb # 5: usage_01587.pdb # # Length: 36 # Identity: 2/ 36 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 36 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 36 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 SCKDQLQ----S-YICFCLPAFEG-RNCETHK---- 26 usage_00384.pdb 1 -GTVHLSCQEKQNTVCTCHAGFFLREN--EC-VSC- 31 usage_00666.pdb 1 FCHEEQN----S-VVCSCARGYTLADNGKAC-IPTG 30 usage_01560.pdb 1 FCHEEQN----S-VVCSCARGYTLADNGKAC-IPTG 30 usage_01587.pdb 1 VCKNSPG----S-FICECSSESTLDPTKTIC-IET- 29 c s C C l n c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################