################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:06:17 2021 # Report_file: c_1232_90.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00504.pdb # 2: usage_00505.pdb # 3: usage_00514.pdb # 4: usage_00515.pdb # 5: usage_00517.pdb # 6: usage_00519.pdb # 7: usage_00520.pdb # 8: usage_00521.pdb # 9: usage_00523.pdb # 10: usage_00524.pdb # 11: usage_00525.pdb # 12: usage_00529.pdb # 13: usage_00530.pdb # 14: usage_00577.pdb # 15: usage_00578.pdb # 16: usage_00579.pdb # 17: usage_00580.pdb # 18: usage_00840.pdb # 19: usage_00988.pdb # 20: usage_01005.pdb # 21: usage_01092.pdb # 22: usage_01093.pdb # 23: usage_01094.pdb # 24: usage_01095.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 30 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 30 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00504.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00505.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00514.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00515.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00517.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00519.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00520.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00521.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00523.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00524.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00525.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00529.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00530.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00577.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00578.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00579.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00580.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_00840.pdb 1 -AV--QDY-----HG-HKICDPYAWLED-P 20 usage_00988.pdb 1 --------FEIKMGM-PFSISMRHAFV--- 18 usage_01005.pdb 1 ---VERKD-----NKITIQFEKVTQR---- 18 usage_01092.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_01093.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_01094.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 usage_01095.pdb 1 AVI--VDR-----KT-GEEFTPLQLLATN- 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################