################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:58 2021 # Report_file: c_0406_43.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00456.pdb # # Length: 107 # Identity: 47/107 ( 43.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/107 ( 68.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/107 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 TVQPETQSAIGSDVSFTCSAASSSD---SPTFAW--DNEALQDAE-ENYAHLR--AQGGE 52 usage_00039.pdb 1 TVQPETQSAIGSDVSFTCSAASSSD---SPTFAW--DNEALQDAE-ENYAHLR--AQGGE 52 usage_00456.pdb 1 -----TMAMVGKDIRFTCSAASSSSSPM--TFAWKKDNEVLTNADMENFVHVHAV----- 48 TqsaiGsDvsFTCSAASSSd TFAW DNEaLqdAe ENyaHlr usage_00038.pdb 53 LEYTTILRLRNVEFTSE-GYQCVISNHFGSSYSV------------- 85 usage_00039.pdb 53 LEYTTILRLRNVEFTSE-GYQCVISNHFGSSYSV------------- 85 usage_00456.pdb 49 MEYTTILHLRQVTFGHEGRYQCVITNHFGSTYSHKARLTVNVLPSFT 95 lEYTTILrLRnVeFtsE gYQCVIsNHFGSsYSv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################