################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:28 2021 # Report_file: c_0747_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00004.pdb # 2: usage_00006.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00054.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 52 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 52 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 NANIIMPE-----K-KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 41 usage_00006.pdb 1 -PTKISIL------GRE-SIIADF--GLWRNYVAKDLISDCSSTTYVLV--- 39 usage_00043.pdb 1 DLTFMKF-ETKKYV-FTIIDAP-GHRD-FVKNMITGAS--Q-ADAAIL-VVS 44 usage_00044.pdb 1 NANIIMP------K-KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 40 usage_00045.pdb 1 NANIIMPT-----K-KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 41 usage_00048.pdb 1 NANIIMPE-----K-KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 41 usage_00049.pdb 1 NANIIMPE-------KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 40 usage_00054.pdb 1 NANIIMP--------KSYIATQGCLQN-TVNDFWRMVFQEN-SRVIVM-T-- 39 i i vn s v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################