################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:38 2021 # Report_file: c_0717_10.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00182.pdb # 2: usage_00229.pdb # 3: usage_00230.pdb # 4: usage_00231.pdb # 5: usage_00232.pdb # # Length: 63 # Identity: 20/ 63 ( 31.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 63 ( 69.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 63 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 QIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAI 60 usage_00229.pdb 1 VLWQMDVTHVSEFGKLKYVHVTVDTYSHFTFATARTGEATKDVLQHLAQSFAYMGIPQKI 60 usage_00230.pdb 1 VLWQMDVTHVSEFGKLKYVHVTVDTYSHFTFATARTGEATKDVLQHLAQSFAYMGIPQKI 60 usage_00231.pdb 1 VLWQMDVTHVSEFGKLKYVHVTVDTYSHFTFATARTGEATKDVLQHLAQSFAYMGIPQKI 60 usage_00232.pdb 1 -LWQMDVT----------VHVTVDTYSHFTFAT--------DVLQHLAQSFAYMGIPQKI 41 lWQmDvT vhVTVDTyShftfaT dvlqHlAqsfAymGiPqkI usage_00182.pdb 61 KTD 63 usage_00229.pdb 61 KTD 63 usage_00230.pdb 61 KTD 63 usage_00231.pdb 61 KTD 63 usage_00232.pdb 42 KTD 44 KTD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################