################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:50 2021 # Report_file: c_0973_35.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00190.pdb # 2: usage_00193.pdb # 3: usage_00309.pdb # 4: usage_00515.pdb # 5: usage_00695.pdb # 6: usage_00696.pdb # 7: usage_00713.pdb # 8: usage_00714.pdb # 9: usage_00715.pdb # 10: usage_00831.pdb # 11: usage_00851.pdb # # Length: 41 # Identity: 3/ 41 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 41 ( 51.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 41 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00190.pdb 1 GGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 41 usage_00193.pdb 1 GGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 41 usage_00309.pdb 1 EAFRGGEVTVNAPIG---K-PPVFYRADSEWAALFASLKSI 37 usage_00515.pdb 1 GGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKFIYD 41 usage_00695.pdb 1 GGIAYEGLSFILPSPTNDGSMSVAISLQGEHM--------- 32 usage_00696.pdb 1 GGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 41 usage_00713.pdb 1 GGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFL-- 39 usage_00714.pdb 1 GGIAYEGLSFVLPSPTNDGSLSVAISLQAEHMKLFEKLLYQ 41 usage_00715.pdb 1 GGIAYEGLSFVLPSPTNDGSLSVAISLQAEHMKLFEKLLYQ 41 usage_00831.pdb 1 GGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKFIYD 41 usage_00851.pdb 1 GGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 41 ggi yegl f lPs g sVai lq Ehm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################