################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:52 2021 # Report_file: c_1023_190.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00019.pdb # 2: usage_00304.pdb # 3: usage_00699.pdb # 4: usage_01153.pdb # 5: usage_01277.pdb # 6: usage_01365.pdb # # Length: 55 # Identity: 1/ 55 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 55 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 55 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 VDILMNNNQIADI---TPLANLTNLTGLTLFNNQI-T-D-------IDPL-KNLT 42 usage_00304.pdb 1 RVLYLNSNQITKL-EPGVFDRLANLRELHLWGNQLVS-L---P---PGVF-DNL- 45 usage_00699.pdb 1 KKLELSENRISGD-LEVLAEKCPNLKHLNLSGNKI---K---D---LSTI-E--- 41 usage_01153.pdb 1 -YLNMASNNIRII-PPHLLPALSQQSIINLSHNPL--DCTCSNIHFITWYKEN-- 49 usage_01277.pdb 1 EKLDLTGNQLQSL-PNGVFDKLTNLKILLLDNNQLQS-L---P---NGVF-DKLK 46 usage_01365.pdb 1 QAIDATDSCIMSIG-FDHMEGLQYVEKIRLCKCHY---I---E---DGCL-ERLS 44 n i l L n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################