################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:26 2021 # Report_file: c_0370_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00022.pdb # 2: usage_00059.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00096.pdb # # Length: 94 # Identity: 16/ 94 ( 17.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 94 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 94 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 PLHIAVVQGNLPAVHRLVNLFQ-QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG- 58 usage_00059.pdb 1 VLHLAARFG----HPDVVKWLLYQGGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYP 56 usage_00065.pdb 1 PLHVAAVCG----QASLIDLLV-SKGAMVNATDYHGATPLHLACQKGYQSVTLLLLHYK- 54 usage_00066.pdb 1 PLHVAAVCG----QASLIDLLV-SKGAMVNATDYHGATPLHLACQKGYQSVTLLLLHYK- 54 usage_00067.pdb 1 PLHVAAVCG----QASLIDLLV-SKGAMVNATDYHGATPLHLACQKGYQSVTLLLLHYK- 54 usage_00096.pdb 1 PLHVAAVCG----QASLIDLLV-SKGAMVNATDYHGATPLHLACQKGYQSVTLLLLHYK- 54 pLH Aav G l ll Ga t gatPlHlA kg sv LL usage_00022.pdb 59 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSA- 91 usage_00059.pdb 57 EGVNAQTNNGATPLYLACQEGHLEVTKYLVQECS 90 usage_00065.pdb 55 ASAEVQDNNGNTPLHLACTYGHEDCVKALVYYDV 88 usage_00066.pdb 55 ASAEVQDNNGNTPLHLACTYGHEDCVKALV---- 84 usage_00067.pdb 55 ASAEVQDNNGNTPLHLACTYGHEDCVKALVYYDV 88 usage_00096.pdb 55 ASAEVQDNNGNTPLHLACTYGHEDCVKALVYY-- 86 as qdnnG TplhLAC gh c kaLv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################