################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:38 2021 # Report_file: c_1332_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00385.pdb # 2: usage_00632.pdb # 3: usage_00633.pdb # 4: usage_00634.pdb # 5: usage_00635.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 69 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 69 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00385.pdb 1 -------------DEVKQSL-EV--------QQAKFIFTGTTTWEGNTDVREY-YAQQQL 37 usage_00632.pdb 1 -EDTVKQRLSVYHAQTAKLIDF-YRNFSSTNTKIPKYIKINGD----------QAVEKVS 48 usage_00633.pdb 1 -EDTVKQRLSVYHAQTAKLIDF-YRNFSSTNTKIPKYIKINGD----------QAVEKVS 48 usage_00634.pdb 1 NEDTVKQRLSVYHAQTAKLIDF-YRNFSSTNTKIPKYIKINGD----------QAVEKVS 49 usage_00635.pdb 1 -EDTVKQRLSVYHAQTAKLIDF-YRNFSSTNTKIPKYIKINGD----------QAVEKVS 48 aqtakli f tkipkyikingd avekvs usage_00385.pdb 38 NLLNHFTQ- 45 usage_00632.pdb 49 QDIFDQLNK 57 usage_00633.pdb 49 QDIFDQLNK 57 usage_00634.pdb 50 QDIFDQLNK 58 usage_00635.pdb 49 QDIFDQL-- 55 qdifdql #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################