################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:16 2021 # Report_file: c_1440_71.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00204.pdb # 2: usage_00205.pdb # 3: usage_00490.pdb # 4: usage_00491.pdb # 5: usage_00894.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 79 ( 6.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 79 ( 74.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 PRTILGTISAAKNELLPPEQFAKRYYEKVVSDVYQEYQQRLLRNH--------------- 45 usage_00205.pdb 1 -LEDTFLKMVK-------------VLRAEREFLEEEAQKLYKEVK--------KGNCLDV 38 usage_00490.pdb 1 NLEDTFLKMVK-------------VLRAEREFLEEEAQKLYKEVK--------KGNCLDV 39 usage_00491.pdb 1 -------------------------LRAEREFLEEEAQKLYKEVK--------KGNCLDV 27 usage_00894.pdb 1 --------FED-WIH--------TGYEKDIRKILEKIIKAFNESTLTSGAQDL-----KY 38 ee qk e usage_00204.pdb ------------------- usage_00205.pdb 39 KKLKEKPLALQRRVIRKF- 56 usage_00490.pdb 40 KKLKEKPLALQRRVIRKFI 58 usage_00491.pdb 28 KKLKEKPLALQRRVIRKF- 45 usage_00894.pdb 39 KSFSETV-S----QVRKL- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################