################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:06 2021 # Report_file: c_0786_92.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00496.pdb # 4: usage_00853.pdb # 5: usage_00854.pdb # 6: usage_00855.pdb # 7: usage_00856.pdb # 8: usage_00857.pdb # 9: usage_00858.pdb # 10: usage_00989.pdb # 11: usage_01122.pdb # # Length: 62 # Identity: 37/ 62 ( 59.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 62 ( 59.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 62 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 ---INANIGN-----TVADEVDKLVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIG 52 usage_00057.pdb 1 -VKINANIGN-----TVADEVDKLVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIG 54 usage_00496.pdb 1 --KVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 58 usage_00853.pdb 1 --KVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 58 usage_00854.pdb 1 -VKVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 59 usage_00855.pdb 1 --KVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 58 usage_00856.pdb 1 --KVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 58 usage_00857.pdb 1 --KVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 58 usage_00858.pdb 1 -VKVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVG 59 usage_00989.pdb 1 -VKINANIGN-----TVADEVDKLVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIG 54 usage_01122.pdb 1 LVKINANIGN----STVADEVDKLVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIG 56 NANIGN EV K WAT WGADT MDLSTGR IH R WI RNS VP G usage_00056.pdb 53 TV 54 usage_00057.pdb 55 TV 56 usage_00496.pdb 59 TV 60 usage_00853.pdb 59 TV 60 usage_00854.pdb 60 TV 61 usage_00855.pdb 59 TV 60 usage_00856.pdb 59 TV 60 usage_00857.pdb 59 TV 60 usage_00858.pdb 60 TV 61 usage_00989.pdb 55 TV 56 usage_01122.pdb 57 TV 58 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################