################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:18 2021 # Report_file: c_0935_45.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00317.pdb # 2: usage_00324.pdb # 3: usage_00325.pdb # 4: usage_00326.pdb # 5: usage_00554.pdb # 6: usage_00591.pdb # 7: usage_00787.pdb # 8: usage_00956.pdb # 9: usage_00957.pdb # 10: usage_00958.pdb # 11: usage_00988.pdb # 12: usage_00989.pdb # 13: usage_00990.pdb # 14: usage_00991.pdb # 15: usage_00992.pdb # 16: usage_00993.pdb # 17: usage_00994.pdb # 18: usage_00999.pdb # 19: usage_01000.pdb # 20: usage_01001.pdb # 21: usage_01488.pdb # # Length: 59 # Identity: 45/ 59 ( 76.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 59 ( 88.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 59 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00317.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00324.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00325.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00326.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00554.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00591.pdb 1 -PVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 58 usage_00787.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAVFLGVPFAKPPLGSLRFAPPQPAESWSHVKNTT 59 usage_00956.pdb 1 -PVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 58 usage_00957.pdb 1 -PVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 58 usage_00958.pdb 1 -PVVDTVHGKVLGKFVSL-----PVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 53 usage_00988.pdb 1 --VVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 57 usage_00989.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00990.pdb 1 --VVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 57 usage_00991.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00992.pdb 1 --VVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 57 usage_00993.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00994.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_00999.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_01000.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_01001.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 usage_01488.pdb 1 PPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNAT 59 VVDTVHGKVLGKFVSL PVAiFLGiPFAKPPLGpLRFtPPQPAEpWSfVKNaT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################