################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:04 2021 # Report_file: c_0462_138.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00104.pdb # 2: usage_00267.pdb # 3: usage_00268.pdb # 4: usage_00333.pdb # # Length: 92 # Identity: 3/ 92 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 92 ( 31.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 92 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 LKIALISQ--N-ENLLNLFPKLALEKNFIPITKTA-S----LTRASKIAFGLQ--DE--V 48 usage_00267.pdb 1 KSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFG-GEA-SLVELDKLRKQC--P-DDT 55 usage_00268.pdb 1 KSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFG-GEA-SLVELDKLRKQC--P-DDT 55 usage_00333.pdb 1 DHYLVIADDFVMKLAGDTLMGSLQQHGVKHHAALF--N--GCHKEIDRLGRELKAH-G-C 54 v ad v n sl q g f e d l usage_00104.pdb 49 DAIIS-----RGATSDYIKKSVSIPSISI--- 72 usage_00267.pdb 56 QVIIGVGGGKTMDSAKYIAHSMNLPSIICP-- 85 usage_00268.pdb 56 QVIIGVGGGKTMDSAKYIAHSMNLPSIICPTT 87 usage_00333.pdb 55 RGVIGVGGGKTLDTAKAIAHYQQLPVVLIPT- 85 iIg t d akyIahs lPsi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################