################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:38 2021 # Report_file: c_0609_27.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00162.pdb # 2: usage_00399.pdb # 3: usage_00524.pdb # 4: usage_00525.pdb # 5: usage_00526.pdb # 6: usage_00527.pdb # 7: usage_00530.pdb # 8: usage_00538.pdb # 9: usage_00539.pdb # # Length: 87 # Identity: 9/ 87 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 87 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 87 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00162.pdb 1 SKVQAAEHTLRNINPDV--LFEVHNYNITTVENFQHFM-DRISNGGLEEGKPVDLVLSCV 57 usage_00399.pdb 1 --SEVAAEAVCAMNPDLKGKINAKIDKVGP-ETEEIFNDSFWE--------SLDFVTNAL 49 usage_00524.pdb 1 -KSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 44 usage_00525.pdb 1 PKSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 45 usage_00526.pdb 1 -KSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 44 usage_00527.pdb 1 PKSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 45 usage_00530.pdb 1 -KSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 44 usage_00538.pdb 1 -KSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 44 usage_00539.pdb 1 -KSQVSQQRLTQLNPDI--QLTALQQRLTG----EALK-DAVA--------RADVVLDCT 44 sqv l NPD a t e d D Vl c usage_00162.pdb 58 DNFEARMTINTACNELGQTWMESGV-- 82 usage_00399.pdb 50 DNVDARTYVDRRCVFYRKPLLESGTLG 76 usage_00524.pdb 45 DNMATRQEINAACVALNTPLITASAV- 70 usage_00525.pdb 46 DNMATRQEINAACVALNTPLITASAV- 71 usage_00526.pdb 45 DNMATRQEINAACVALNTPLITASAVG 71 usage_00527.pdb 46 DNMATRQEINAACVALNTPLITASAVG 72 usage_00530.pdb 45 DNMATRQEINAACVALNTPLITASAVG 71 usage_00538.pdb 45 DNMATRQEINAACVALNTPLITASAVG 71 usage_00539.pdb 45 DNMATRQEINAACVALNTPLITASAVG 71 DN R in aCv l pl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################