################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:20 2021 # Report_file: c_1011_11.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00200.pdb # 2: usage_00279.pdb # 3: usage_00364.pdb # 4: usage_00366.pdb # 5: usage_00367.pdb # 6: usage_00436.pdb # 7: usage_00438.pdb # 8: usage_00485.pdb # 9: usage_00487.pdb # 10: usage_00489.pdb # 11: usage_00491.pdb # 12: usage_00494.pdb # # Length: 69 # Identity: 17/ 69 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 69 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 69 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00200.pdb 1 EGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPATYQGDVYYCAG-Y--DPPMKPYGRR 57 usage_00279.pdb 1 -GITVYSTQFGGYAKEADYVAHATQLRTTLEGTPATYQGDVYYCAGYDPPMKPYG---RR 56 usage_00364.pdb 1 --ETVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 55 usage_00366.pdb 1 --ETVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 55 usage_00367.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYN----KLL--NRN 53 usage_00436.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00438.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00485.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00487.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00489.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00491.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 usage_00494.pdb 1 -EMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNS-PVKLL--NRN 56 TV F G L L VYY AG R usage_00200.pdb 58 NEVWLVKA- 65 usage_00279.pdb 57 NEVWLV--- 62 usage_00364.pdb 56 NEVWLIQKN 64 usage_00366.pdb 56 NEVWLIQKN 64 usage_00367.pdb 54 NEVWLIQK- 61 usage_00436.pdb 57 NEVWLIQK- 64 usage_00438.pdb 57 NEVWLIQK- 64 usage_00485.pdb 57 NEVWLIQKN 65 usage_00487.pdb 57 NEVWLIQKN 65 usage_00489.pdb 57 NEVWLI--- 62 usage_00491.pdb 57 NEVWLIQKN 65 usage_00494.pdb 57 NEVWLI--- 62 NEVWL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################