################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:26 2021 # Report_file: c_0216_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00033.pdb # 2: usage_00038.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00061.pdb # 7: usage_00066.pdb # # Length: 165 # Identity: 34/165 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/165 ( 37.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/165 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -KEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWG-RT 58 usage_00038.pdb 1 EKQFPHPKYDDRLVLNDIMLLKLKEKANLTLGVGTLPISAKSNSIPPGRVCRAVGWG-RT 59 usage_00040.pdb 1 -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG--- 56 usage_00041.pdb 1 -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-I- 57 usage_00042.pdb 1 -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGI-- 57 usage_00061.pdb 1 LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-IV 59 usage_00066.pdb 1 LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-IV 59 PhP p t Dl LLqL EKA l V Lp dv PGt C vaGWG usage_00033.pdb 59 HNSASWSDTLREVNITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL 118 usage_00038.pdb 60 NVNEPPSDTLQEVKMRILDPQACKH---F-E-DFHQEPQLCVGNPKKIRNVYKGDSGGPL 114 usage_00040.pdb 57 ------PDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N------GDSGGPL 100 usage_00041.pdb 58 -------DSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N-------DSGGPL 99 usage_00042.pdb 58 ------PDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N-------DSGGPL 100 usage_00061.pdb 60 NHAGRRPDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-NRRDSCKGDSGGPL 115 usage_00066.pdb 60 NHAGRRPDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-NRRDSCKGDSGGPL 115 D Lq V lDr Cn i e Ca DSGgPL usage_00033.pdb 119 LCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKGA 163 usage_00038.pdb 115 LCAGIAQGIASY-VLRNA---KPPSVFTRIS-HYRPWINKILREN 154 usage_00040.pdb 101 VCGGVLEGVVTS-G-----K--KPGIYTRVA-SYAAWIDSVLA-- 134 usage_00041.pdb 100 VCGGVLEGVVTS-------K--KPGIYTRVA-SYAAWIDSVL--- 131 usage_00042.pdb 101 VCGGVLEGVVTS-G--------KPGIYTRVA-SYAAWIDSVLA-- 133 usage_00061.pdb 116 VCGGVLEGVVTS-GSAVCGNRKKPGIYTRVA-SYAAWIDSVLA-- 156 usage_00066.pdb 116 VCGGVLEGVVTS-GSRVCGNRKKPGIYTRVA-SYAAWIDSVLA-- 156 C Gv Gv Pg ytr y WI l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################