################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:46 2021 # Report_file: c_0039_28.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00020.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # # Length: 251 # Identity: 57/251 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 225/251 ( 89.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/251 ( 10.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 --LLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFF 58 usage_00030.pdb 1 NDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFY 60 usage_00031.pdb 1 NDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFY 60 eflaAiAhwfstqhytaidsqtvvygPsViymvselIrqwsetgegVvihTPAYdaFy usage_00020.pdb 59 HLLSATQREGIFIDATG-----GINLHDVEKGFQAG-ARSILLCNPYNPLG-VFAPEWLN 111 usage_00030.pdb 61 KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE 120 usage_00031.pdb 61 KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE 120 kaiegnQRtvmpvalek fcdmgklEavlakp ckimLLCsPqNPtG VwtcdeLe usage_00020.pdb 112 ELCDLAHRYDARVLVDEIHAPLVFD-GQHTVAAGVSDTA-ASVCITITAPS-AWNIAGLK 168 usage_00030.pdb 121 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV----ARGDWALLTSGSKSFNIPALT 176 usage_00031.pdb 121 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV----ARGDWALLTSGSKSFNIPALT 176 imaDLceRhgvRVisDEIHmdmVwg qpHipwsnV rgdwallTsgS sfNIpaLt usage_00020.pdb 169 CAQIIFSNPSDAEHWQQLSPV---IK-DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNH 224 usage_00030.pdb 177 GAYGIIENSSSRDAYLSAL--KGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNL 234 usage_00031.pdb 177 GAYGIIENSSSRDAYLSAL--KGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNL 234 gAygIieNsSsrdaylsal dg sspSvLaLtAhiAAYqqGapwLdalriYLKdNl usage_00020.pdb 225 DFLLHEI---- 231 usage_00030.pdb 235 TYIADKMNAAF 245 usage_00031.pdb 235 TYIADKMNAAF 245 tyiadkm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################