################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:36 2021 # Report_file: c_0467_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00010.pdb # 2: usage_00156.pdb # 3: usage_00432.pdb # 4: usage_00508.pdb # 5: usage_00514.pdb # 6: usage_00515.pdb # 7: usage_00516.pdb # 8: usage_00638.pdb # 9: usage_00659.pdb # # Length: 112 # Identity: 0/112 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/112 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/112 ( 56.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --IYLMRGRQWAIKLKQKTVDPEVNNVVVIG----SGYIGIEAAEAFAKAGKKVTVIDIL 54 usage_00156.pdb 1 DVQLLMND--------------------SQNDQSK-QNDQIDVLLAKG---V-KALAINL 35 usage_00432.pdb 1 -LTHSLRNIPDMDRILQTIQMNNVEHATVVG----GGFIGLEMMESLHHLGIKTTLLELA 55 usage_00508.pdb 1 -ITFTLRNLEDTDAIDQFIKANQVDKVLVVG----AGYVSLEVLENLYERGLHPTLIHRS 55 usage_00514.pdb 1 -ITFTLRNLEDTDAIDQFIKANQVDKVLVVG----AGYVSLEVLENLYERGLHPTLIHRS 55 usage_00515.pdb 1 -ITFTLRNLEDTDAIDQFIKANQVDKVLVVG----AGYVSLEVLENLYERGLHPTLIHRS 55 usage_00516.pdb 1 -ITFTLRNLEDTDAIDQFIKANQVDKVLVVG----AGYVSLEVLENLYERGLHPTLIHRS 55 usage_00638.pdb 1 -LTHSLRNIPDMDRILQTIQMNNVEHATVVG----GGAIGLEMMESLHHLGIKTTLLELA 55 usage_00659.pdb 1 -ITFTLRNLEDTDAIDQFIKANQVDKVLVVG----AGYVSLEVLENLYERGLHPTLIHRS 55 r v g g e e tl usage_00010.pdb 55 DRPLGVYLDKEF----------------------TDVLTEEMEANNITIATG 84 usage_00156.pdb 36 ------VDP-AAAGTVIEKARGQNVPVVFFNKEPSRKALDSYD--KAYYVG- 77 usage_00432.pdb 56 DQVMTPVDR-EM----------------------AGFAHQAIRDQGVDLRLG 84 usage_00508.pdb 56 DKINKLMDA-DM----------------------NQPILDELDKREIPYRLN 84 usage_00514.pdb 56 DKINKLMDA-DM----------------------NQPILDELDKREIPYRLN 84 usage_00515.pdb 56 DKINKLMDA-DM----------------------NQPILDELDKREIPYRLN 84 usage_00516.pdb 56 DKINKLMDA-DM----------------------NQPILDELDKREIPYRLN 84 usage_00638.pdb 56 DQVMTPVDR-EM----------------------AGFAHQAIRDQGVDLRLG 84 usage_00659.pdb 56 DKINKLMDA-DM----------------------NQPILDELDKREIPYRLN 84 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################