################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:01 2021 # Report_file: c_0117_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00101.pdb # 4: usage_00102.pdb # 5: usage_00112.pdb # 6: usage_00139.pdb # 7: usage_00140.pdb # # Length: 114 # Identity: 52/114 ( 45.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/114 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/114 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 -QVEQSPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQLINLFYIPSGTKQNGRLSA 59 usage_00061.pdb 1 IQVEQSPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQLINLFYIPSGTKQNGRLSA 60 usage_00101.pdb 1 -PVEQNPPALSLYEGADSGLRCNFSTTMKSVQWFQQNHRGRLITLFYLAQGTKENGRLKS 59 usage_00102.pdb 1 -PVEQNPPALSLYEGADSGLRCNFSTTMKSVQWFQQNHRGRLITLFYLAQGTKENGRLKS 59 usage_00112.pdb 1 IQVEQSPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQLINLFYIPSGTKQNGRLSA 60 usage_00139.pdb 1 -QVEQSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKS 59 usage_00140.pdb 1 -QVEQSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKS 59 VEQ P L L EG S LRCNF QWF QN G LI LFY GTK NGRL usage_00060.pdb 60 TTV-ATER-YSLLYISSSQTTDSGVYFCAALIQGA-QKLVFGQGTRLTINP--- 107 usage_00061.pdb 61 TTV-ATER-YSLLYISSSQTTDSGVYFCAALIQGA-QKLVFGQGTRLTINP--- 108 usage_00101.pdb 60 TFN-SKER-YSTLHIKDAQLEDSGTYFCAAEDGGSGNKLIFGTGTLLSVKPNIQ 111 usage_00102.pdb 60 TFN-SKER-YSTLHIKDAQLEDSGTYFCAAEDGGSGNKLIFGTGTLLSVKPNIQ 111 usage_00112.pdb 61 TTV-ATER-YSLLYISSSQTTDSGVYFCAVD------RLYFGRGTQLTVWP--- 103 usage_00139.pdb 60 AFD-SKERRYSTLHIRDAQLEDSGTYFCAAEASSGSWQLIFGSGTQLTVMP--- 109 usage_00140.pdb 60 AFDSKERR-YSTLHIRDAQLEDSGTYFCAAEASSGAWQLIFGSGTQLTVMP--- 109 eR YS L I Q DSG YFCAa L FG GT L P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################