################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:27 2021 # Report_file: c_1175_139.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00434.pdb # 3: usage_00746.pdb # 4: usage_00781.pdb # 5: usage_00949.pdb # 6: usage_00954.pdb # 7: usage_01017.pdb # 8: usage_01083.pdb # 9: usage_01084.pdb # 10: usage_01166.pdb # 11: usage_01202.pdb # 12: usage_01215.pdb # 13: usage_01247.pdb # 14: usage_01263.pdb # 15: usage_01274.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 55 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 55 ( 61.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----AVYYCAEIT-T--------------------DF----DVWGAGTTVTVS- 24 usage_00434.pdb 1 VYSCTTDGFIMIRG-V---------------------SE---DYYYYYMDVW-GK 29 usage_00746.pdb 1 -----AVYYCATGG-N--Y---Y----N-LWTGYY-PL----AYWGQGTLVTVS- 33 usage_00781.pdb 1 -----GKYFCTRLY-LFE-GAQ--------------SS-NAFDLWGQGTMILVS- 32 usage_00949.pdb 1 ------VYYCYYHYYG--W---H---------PGY-GLS---YSSGQGTLVTVS- 30 usage_00954.pdb 1 -----AVYYCNAWG-QDG--W------------LG-QY----DYWGQGTQVTVS- 29 usage_01017.pdb 1 -----AVYYCASRL-G--V---RA--------TTG-DL----DYWGQGTLVTVS- 30 usage_01083.pdb 1 -----AVYYCTRNY-G-S----------------D-SL----DYWGQGTTLTVS- 26 usage_01084.pdb 1 -----AVYYCTRNY-G-S----------------D-SL----DYWGQGTTLTVS- 26 usage_01166.pdb 1 -----AVYYCARDR-V--M---Y-YWSFSKYGYPY-GM----DYWGQGTLVTVS- 37 usage_01202.pdb 1 -----AVYYCARVG-E--WGWDDS------PYDNY-YM----DVWGKGTTVIVS- 35 usage_01215.pdb 1 ------VYYCNADA-RTI---T------------G-RA----DYWGQGTQVTVS- 27 usage_01247.pdb 1 -----AVYYCASRD-YDY---A------------GRYF----DYWGQGTLVTVS- 29 usage_01263.pdb 1 FYFCAKDKGDSDYD-Y--------------------NLG---YSYFYYMDGW-GK 30 usage_01274.pdb 1 -----AVYYCARYY-YDY----------------D-GM----DYWGQGTSVTVS- 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################