################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:41 2021 # Report_file: c_1446_143.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00069.pdb # 2: usage_00539.pdb # 3: usage_01040.pdb # 4: usage_01104.pdb # 5: usage_01171.pdb # 6: usage_01172.pdb # 7: usage_01229.pdb # 8: usage_01287.pdb # 9: usage_01332.pdb # 10: usage_02044.pdb # 11: usage_02085.pdb # 12: usage_02149.pdb # # Length: 25 # Identity: 0/ 25 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 25 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 25 ( 76.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 N--VD------YSFAAIS-N----- 11 usage_00539.pdb 1 --GAK-------YTLAT--N----- 9 usage_01040.pdb 1 ---GK-------WYVVG-AA----G 10 usage_01104.pdb 1 -GKWY-------VVALAS-N----- 11 usage_01171.pdb 1 -GPWK-------TLYVSS-N----- 11 usage_01172.pdb 1 -GPWK-------TLYVSS-N----- 11 usage_01229.pdb 1 -GEWF-------SILLAS-D----- 11 usage_01287.pdb 1 -----KKCDDPGKCFVLV-ALSND- 18 usage_01332.pdb 1 --QCI-------FALAS--Y----- 9 usage_02044.pdb 1 -GEWY-------TIMLAT-D----- 11 usage_02085.pdb 1 --QCI-------FALAS--Y----- 9 usage_02149.pdb 1 N--VD------YSFAAIS-N----- 11 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################