################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:44 2021 # Report_file: c_0935_56.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00070.pdb # 2: usage_00072.pdb # 3: usage_00074.pdb # 4: usage_00233.pdb # 5: usage_00253.pdb # 6: usage_00346.pdb # 7: usage_00385.pdb # 8: usage_00430.pdb # 9: usage_00432.pdb # 10: usage_01322.pdb # 11: usage_01458.pdb # # Length: 85 # Identity: 0/ 85 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 85 ( 2.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 72/ 85 ( 84.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00072.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00074.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00233.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00253.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00346.pdb 1 -------------LQSTYN--TA----------SNSETEWLDDLGNFW---------EYK 26 usage_00385.pdb 1 --NPWYQFYSPGL--DVKKSKLSKTSSGSSA-----------------SYVFDCKNKI-S 38 usage_00430.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_00432.pdb 1 NA--------FYS--EKTT--FKT---VKDSLTNYESA-------------------TGR 26 usage_01322.pdb 1 ----------------KTT--FKT---VKDSLTNYESA-------------------TGR 20 usage_01458.pdb 1 ----------------KTT--FKT---VKDSLTNYESA-------------------TGR 20 usage_00070.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00072.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00074.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00233.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00253.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00346.pdb 27 LKVNVNYAAR---------TFST-- 40 usage_00385.pdb 39 NWNVTL------------------- 44 usage_00430.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_00432.pdb 27 SWDIFNPNKVNPYSGKPPSYKLVST 51 usage_01322.pdb 21 SWDIFNPNKVNPYSGKPPSYKLVST 45 usage_01458.pdb 21 SWDIFNPNKVNPYSGKPPSYKLVST 45 w n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################