################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:56 2021 # Report_file: c_1429_174.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00206.pdb # 2: usage_00407.pdb # 3: usage_01091.pdb # 4: usage_01092.pdb # # Length: 65 # Identity: 2/ 65 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 65 ( 23.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 65 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00206.pdb 1 -------INDALTSILAS----KKYRALCPDTVRRILTEEWGR-HKSPKQ-TVEAARTRL 47 usage_00407.pdb 1 DEDKIEMMKQMIRRLTEICKHEGI-AIADMKVVAALVKKNF---------PDFRKTIGEL 50 usage_01091.pdb 1 -----DRIDEIERAITKS----RRYQTVAPATVRRLARAALVAARGDVPD-AVKRTKRGL 50 usage_01092.pdb 1 ------RIDEIERAITKS----RRYQTVAPATVRRLARAALVAARGDVPD-AVKRTKRGL 49 i r it s p tVrrl v t L usage_00206.pdb 48 HGICG 52 usage_00407.pdb 51 DS--- 52 usage_01091.pdb 51 HEI-- 53 usage_01092.pdb 50 HE--- 51 h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################