################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:43 2021 # Report_file: c_0215_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00079.pdb # # Length: 159 # Identity: 50/159 ( 31.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 98/159 ( 61.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/159 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPS---SID 55 usage_00020.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPS---SID 55 usage_00021.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPS---SID 55 usage_00074.pdb 1 -DPITFAPFKISCEDEQA-RTDYFIRTLLLEFQNESRRLYQFHYVNWPDH--------FD 50 usage_00075.pdb 1 QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR----GVPSPD 56 usage_00079.pdb 1 --QLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPS---SID 54 l fgpF sce Ek Dy iRTLkv F E R YQfhY nWPDh D usage_00008.pdb 56 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 115 usage_00020.pdb 56 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 115 usage_00021.pdb 56 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 115 usage_00074.pdb 51 SILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQ 110 usage_00075.pdb 57 HMLAMVEEARRLQGSGPEPLCVHSSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVL 116 usage_00079.pdb 55 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 114 iL i R yQe vPiCiHcSAGCGRTGviCaiDYtw LLk g IPe FsvF li usage_00008.pdb 116 EMRTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDKHS 154 usage_00020.pdb 116 EMRTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDKHS 154 usage_00021.pdb 116 EMRTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDKHS 154 usage_00074.pdb 111 EMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQ------- 142 usage_00075.pdb 117 KMRKQRPAAVQTEEQYRFLYHTVAQMF------------ 143 usage_00079.pdb 115 EMRTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDKH- 152 eMRtQRps VQT EQYelvy av lF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################