################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:02 2021 # Report_file: c_1078_16.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00070.pdb # 2: usage_00077.pdb # 3: usage_00099.pdb # 4: usage_00100.pdb # 5: usage_00115.pdb # 6: usage_00203.pdb # 7: usage_00281.pdb # 8: usage_00314.pdb # 9: usage_00329.pdb # 10: usage_00330.pdb # 11: usage_00382.pdb # # Length: 95 # Identity: 2/ 95 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 95 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/ 95 ( 56.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 ----------------VVDWAGRGVRLNVVAPG------------------VAP------ 20 usage_00077.pdb 1 -------------LPAARELARFGIRVVTIAPGI-FDTP-----DALAAS-VPF------ 34 usage_00099.pdb 1 -----------------AAWGEAGVRLNTIAPGA--------------------TETPFV 23 usage_00100.pdb 1 -----------------AAWGEAGVRLNTIAPGA----------------FVPP------ 21 usage_00115.pdb 1 -----------VTRLMANEWAKHGINVNAIAPGY-MATN-------ILD--RIP------ 33 usage_00203.pdb 1 TMGVAKASLEATVRYTALALGEDGIKVNAVSAGP-IK--KML--DYNAM--VSP------ 47 usage_00281.pdb 1 -------------------AVEFGVRINAVSPSIAR--------------HDEA------ 21 usage_00314.pdb 1 -------------------IAKHGHRINAISAGP--------------------V----- 16 usage_00329.pdb 1 -----------------AAWGEAGVRLNTIAPGA------------------------FV 19 usage_00330.pdb 1 -----------------AAWGEAGVRLNTIAPGA----------------FVPP------ 21 usage_00382.pdb 1 ---------------LAPGLAAKGITINAVAPGF-IET-IPLATREGRR--LNS------ 35 G n g usage_00070.pdb 21 --LGRGSEPREVAEAIAFLLGPQASFIHGSVLFVD 53 usage_00077.pdb 35 --PPRLGRAEEYAALVKHICE--NT-LNGEVIRLD 64 usage_00099.pdb 24 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVID 58 usage_00100.pdb 22 --MGRRAEPSEMASVIAFLMSPAASYVHGAQIVID 54 usage_00115.pdb 34 --AGRWGLPQDLMGPSVFLASSASDYINGYTIAVD 66 usage_00203.pdb 48 --LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVD 80 usage_00281.pdb 22 --FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVS 54 usage_00314.pdb 17 -----PITIEDVGDTAVFLCSDWARAITGEVVHVD 46 usage_00329.pdb 20 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVID 54 usage_00330.pdb 22 --MGRRAEPSEMASVIAFLMSPAASYVHGAQIVID 54 usage_00382.pdb 36 --LLQGGQPVDVAEAIAYFASPASNAVTGNVIRVC 68 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################