################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:43:38 2021 # Report_file: c_0148_1.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00016.pdb # 2: usage_00049.pdb # 3: usage_00072.pdb # 4: usage_00073.pdb # 5: usage_00074.pdb # 6: usage_00096.pdb # 7: usage_00106.pdb # 8: usage_00133.pdb # 9: usage_00134.pdb # 10: usage_00135.pdb # 11: usage_00136.pdb # 12: usage_00137.pdb # 13: usage_00138.pdb # 14: usage_00163.pdb # 15: usage_00164.pdb # 16: usage_00165.pdb # 17: usage_00166.pdb # 18: usage_00205.pdb # 19: usage_00206.pdb # 20: usage_00302.pdb # 21: usage_00305.pdb # 22: usage_00321.pdb # # Length: 113 # Identity: 28/113 ( 24.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/113 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/113 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 --VLTQSPATLSLSPGERATISCRASQS----VGGYLTWYQQKPGQAPRLLIYDASNRAT 54 usage_00049.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00072.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00073.pdb 1 ELELTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00074.pdb 1 ELELTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00096.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQV----ISHNLAWYQQKPGQAPRLLIYGASTRAS 55 usage_00106.pdb 1 ---VLTQPPLVSGTPGQTVTISCAGAN-NDIGTYAYVSWYQQLPGTAPKLLIYKVTTRAS 56 usage_00133.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00134.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00135.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00136.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00137.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00138.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00163.pdb 1 --VMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 54 usage_00164.pdb 1 --VMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 54 usage_00165.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00166.pdb 1 --VMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 54 usage_00205.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQS----VRSNLAWYQQRPGQAPRLLIYGTSTRAT 55 usage_00206.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQS----VRSNLAWYQQRPGQAPRLLIYGTSTRAT 55 usage_00302.pdb 1 -IVLTQSPATLSVTPGNSVSLSCRASQS----IGNNLHWYQQKSHESPRLLIKAASQSIS 55 usage_00305.pdb 1 DIVMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 56 usage_00321.pdb 1 --VMTQSPATLSVSPGERATLSCRASES----VSSDLAWYQQKPGQAPRLLIYGASTRAT 54 tqsPatlS PG t SCras l WYQQ pg aPrLLIy s ra usage_00016.pdb 55 GIPARFSGSGSGTDFTLTISGLEPEDFAIYYCQQRGNWPPI-TFGQGTRLEI- 105 usage_00049.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00072.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00073.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00074.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00096.pdb 56 GIPARFSGSGSGTDYTLTITSLQPEDFAVYYCQHYSNWPPR-LTFGGGTKVEI 107 usage_00106.pdb 57 GIPSRFSGSKSGNTASLTISGLQSEDEADYYCASYRNFNNA-VFGRGTHLTV- 107 usage_00133.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00134.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00135.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00136.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00137.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00138.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00163.pdb 55 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 106 usage_00164.pdb 55 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 106 usage_00165.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00166.pdb 55 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 106 usage_00205.pdb 56 GVPARFSGRGSGTEFTLAISSMQSEDFAVYLCLQYNN---W-WTFGQGTKVEI 104 usage_00206.pdb 56 GVPARFSGRGSGTEFTLAISSMQSEDFAVYLCLQYNN---W-WTFGQGTKVEI 104 usage_00302.pdb 56 GIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNS---WPYTFGGGTKLEI 105 usage_00305.pdb 57 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 108 usage_00321.pdb 55 GVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPR-YTFGQGTRLEI 106 G P RFSG gSG tL I EDfa Y C n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################