################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:59 2021 # Report_file: c_0054_26.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00017.pdb # 2: usage_00146.pdb # 3: usage_00188.pdb # 4: usage_00218.pdb # 5: usage_00234.pdb # # Length: 282 # Identity: 92/282 ( 32.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/282 ( 39.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/282 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 TEASITLAK-ILDRAPKN-SKVYFGLGGSDANETNVKLIWYYNNILGRPEKKKIISRWRG 58 usage_00146.pdb 1 -PAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNG 59 usage_00188.pdb 1 -PAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNG 59 usage_00218.pdb 1 TEASITLAK-IIDRAPKG-SRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRG 58 usage_00234.pdb 1 HPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNG 60 A L P g rV sGS T i Y v G PEKK I RW G usage_00017.pdb 59 YHGSGLVTGSLTGLELFHKKFDLPVEQVIHTEAPYYFRREDLNQTEEQFVAHCVAELEAL 118 usage_00146.pdb 60 YHGSTIGGASLGGMKYMH---DLPIPGMAHIEQPWWYKH-GKDMTPDEFGVVAARWLEEK 115 usage_00188.pdb 60 YHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKH-GKDMTPDEFGVVAARWLEEK 118 usage_00218.pdb 59 YHGSGV-TGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRR-TDRSSEEQFSQHCADKLEE- 115 usage_00234.pdb 61 YHGSTIGGASLGGMKYMH--GDLPIPGMAHIEQPWWYKH-GKDMTPDEFGVVAARWLEEK 117 YHGS SL G H DLP H E P t F a LEe usage_00017.pdb 119 IEREGADTIAAFIGEPILGTGGIVPPPAGYWEAIQTVLNKHDILLVADEVVTGFGRLGT- 177 usage_00146.pdb 116 ILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW 175 usage_00188.pdb 119 ILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW 178 usage_00218.pdb 116 ILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT- 174 usage_00234.pdb 118 ILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW 177 Il Gad AAF GEPI G GG PPA YW I KyDvLLVADEV GFGR G usage_00017.pdb 178 FGSDHYGLEPDIITIAKGLTSAYAPLSGSIVSDKVWKVLEQGT-----DENGPIGHGWTY 232 usage_00146.pdb 176 FGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG---------FTY 226 usage_00188.pdb 179 FGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG---------FTY 229 usage_00218.pdb 175 FGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGS-----DKLGSLGHGWTY 229 usage_00234.pdb 178 FGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG---------FTY 228 FG H G PDl T AKGL S Y P v V rV L G TY usage_00017.pdb 233 SAHPIGAAAGVANLKLLDELN-LVSNAGEVGAYLNA-TAEA- 271 usage_00146.pdb 227 SGHPVCAAVAHANVAALRDEG-IVQRVKD------------- 254 usage_00188.pdb 230 SGHPVCAAVAHANVAALRDEG-IVQRVKD------------- 257 usage_00218.pdb 230 SAHPICVAAGVANLELIDEDL-VTNAGETGAYFRAE-LAKA- 268 usage_00234.pdb 229 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETF 270 S HP caA AN l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################