################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:25 2021 # Report_file: c_0761_69.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00054.pdb # 3: usage_00086.pdb # 4: usage_00124.pdb # 5: usage_00148.pdb # 6: usage_00182.pdb # 7: usage_00196.pdb # 8: usage_00305.pdb # 9: usage_00333.pdb # # Length: 67 # Identity: 2/ 67 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 67 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 67 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 PLKTQQMQVGG-M-DCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQ 58 usage_00054.pdb 1 ATQTVTLSVPG-M-TCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLT 58 usage_00086.pdb 1 YVSSLRIEIPADIAA----NEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKVTNRFEVE 56 usage_00124.pdb 1 --REVILAVHG-M-TCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDN-EVTADSIK 55 usage_00148.pdb 1 --MERTVRVTG-M-TCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIK 56 usage_00182.pdb 1 --AVVKLRVEG-M-TCQSCVSSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLR 56 usage_00196.pdb 1 --NSVTISVEG-M-TCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQ 56 usage_00305.pdb 1 ------LQVEG-M-SCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIA 52 usage_00333.pdb 1 VTEKAEFDIEG-M-TCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLK 58 g m GV usage_00005.pdb 59 ERIAALG 65 usage_00054.pdb 59 KATADAG 65 usage_00086.pdb 57 QAIRQA- 62 usage_00124.pdb 56 EIIEDCG 62 usage_00148.pdb 57 RVIEDLG 63 usage_00182.pdb 57 DHVNDM- 62 usage_00196.pdb 57 EAIDDM- 62 usage_00305.pdb 53 DAIED-- 57 usage_00333.pdb 59 EAVDKL- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################