################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:21 2021 # Report_file: c_1102_7.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00040.pdb # 4: usage_00042.pdb # 5: usage_00068.pdb # 6: usage_00070.pdb # 7: usage_00079.pdb # 8: usage_00083.pdb # 9: usage_00104.pdb # 10: usage_00106.pdb # 11: usage_00108.pdb # 12: usage_00109.pdb # 13: usage_00111.pdb # 14: usage_00135.pdb # 15: usage_00137.pdb # 16: usage_00139.pdb # # Length: 99 # Identity: 55/ 99 ( 55.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 99 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 99 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNCSVNPAR 60 usage_00004.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNCSVNPAR 60 usage_00040.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00042.pdb 1 -MLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 59 usage_00068.pdb 1 SLVSALLIEIILTAFFLIVILGSTHGRVPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00070.pdb 1 SLVSALLIEIILTAFFLIVILGSTHGRVPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00079.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00083.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00104.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00106.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPAR 60 usage_00108.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIGLISIPVTNFSVNPAR 60 usage_00109.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIGLISIPVTNFSVNPAR 60 usage_00111.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIGLISIPVTNFSVNPAR 60 usage_00135.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNCSVNPAR 60 usage_00137.pdb 1 -MLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLACTLIHLISIPVTNTSVNPAR 59 usage_00139.pdb 1 SMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLACTLIHLISIPVTNTSVNPAR 60 SAL E L A FL VI G T PAGFAPIAIGLA TLI LISIPVTN SVNPAR usage_00002.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYR---- 95 usage_00004.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00040.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00042.pdb 60 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 97 usage_00068.pdb 61 STGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLF-- 97 usage_00070.pdb 61 STGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLF-- 97 usage_00079.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00083.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRT--- 96 usage_00104.pdb 61 STAVAIFQGGWALEQLWFFWV------------------ 81 usage_00106.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00108.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00109.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00111.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 98 usage_00135.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 99 usage_00137.pdb 60 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL- 97 usage_00139.pdb 61 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRT--- 96 ST A F GGWAL QLW FW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################