################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:32 2021 # Report_file: c_1270_84.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00622.pdb # 2: usage_00665.pdb # 3: usage_00717.pdb # 4: usage_00828.pdb # 5: usage_01002.pdb # 6: usage_01003.pdb # # Length: 26 # Identity: 0/ 26 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 26 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 26 ( 42.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00622.pdb 1 PQESVAFI-PA---DQVPRAQHIL-Q 21 usage_00665.pdb 1 ----TFIVSGAGIE--FRPWAKEVYG 20 usage_00717.pdb 1 -K-VTLVVGAS---QDIIPQLKKKYD 21 usage_00828.pdb 1 -K-VTILNGAS---QDLIPQLKKKYD 21 usage_01002.pdb 1 -K-VTILNGAS---QDLIPQLKKKYD 21 usage_01003.pdb 1 -K-VTILNGAS---QDLIPQLKKKYD 21 t p k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################