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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:58:25 2021
# Report_file: c_1111_19.html
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#====================================
# Aligned_structures: 3
#   1: usage_00403.pdb
#   2: usage_00404.pdb
#   3: usage_00541.pdb
#
# Length:        177
# Identity:      152/177 ( 85.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    164/177 ( 92.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/177 (  7.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00403.pdb         1  CLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVGMGMDHLRY   60
usage_00404.pdb         1  --------IVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVGMGMDHLRY   52
usage_00541.pdb         1  CLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVG-G-DHLRY   58
                                   IVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVG G DHLRY

usage_00403.pdb        61  YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGN  120
usage_00404.pdb        53  YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGN  112
usage_00541.pdb        59  YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVN-GLKGLQICGNSI-PLLTFYGN  116
                           YIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVN GLKGLQICGNSI PLLTFYGN

usage_00403.pdb       121  SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKK  177
usage_00404.pdb       113  SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKK  169
usage_00541.pdb       117  SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALFGVQAVDLRTYKK-  172
                           SIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALmfgvqavdlrtyK 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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