################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:14 2021 # Report_file: c_0189_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00271.pdb # 2: usage_00544.pdb # 3: usage_00584.pdb # 4: usage_00585.pdb # 5: usage_00586.pdb # 6: usage_00769.pdb # # Length: 232 # Identity: 39/232 ( 16.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/232 ( 31.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/232 ( 22.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00271.pdb 1 -----TRQREARTAGRLQEPHVVPIHDFGEID----GQLYVD-RLINGVDLAA-LRRQGP 49 usage_00544.pdb 1 PSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP 60 usage_00584.pdb 1 -ETLKRFEREVHNSSQLSHQNIVSMIDVDEED----DCYYLVMEYIEGPTLSEYIESHGP 55 usage_00585.pdb 1 EETLKRFEREVHNSSQLSHQNIVSMIDVDEED----DCYYLVMEYIEGPTLSEYIESHGP 56 usage_00586.pdb 1 -ETLKRFEREVHNSSQLSHQNIVSMIDVDEED----DCYYLVMEYIEGPTLSEYIESHGP 55 usage_00769.pdb 1 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP 60 rf RE n L h iV d E Y v ey G tL GP usage_00271.pdb 50 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIGTLYY----- 104 usage_00544.pdb 61 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD--------FG--- 109 usage_00584.pdb 56 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD--------FGIAK 107 usage_00585.pdb 57 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD--------FGIAK 108 usage_00586.pdb 56 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD--------FGIAK 107 usage_00769.pdb 61 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD--------FG--- 109 Ai H i HRD KP NI i k D usage_00271.pdb 105 --------------APERFSEY-----RADIYALTCVLYECLTGSPPYQGD-QL-SVGAH 143 usage_00544.pdb 110 --IARAIA-TAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 165 usage_00584.pdb 108 AL-------TVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 159 usage_00585.pdb 109 AL-------TVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 160 usage_00586.pdb 108 AL-------TVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 159 usage_00769.pdb 110 --IARAI-GTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 165 sPEqa g D Ys g VLYE L GePPf G v a H usage_00271.pdb 144 INQAIPRPSTV-RPGIPVAFDAVIARG-AKNPEDRYVTCGDLSAAAHAA--- 190 usage_00544.pdb 166 VREDPIPPSAR-HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN- 215 usage_00584.pdb 160 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV--- 208 usage_00585.pdb 161 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV--- 209 usage_00586.pdb 160 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV--- 208 usage_00769.pdb 166 VREDPIPPSAR-HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 216 l V l a K nRY T em dl v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################