################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:37 2021 # Report_file: c_1025_55.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00021.pdb # 2: usage_00087.pdb # 3: usage_00171.pdb # 4: usage_00279.pdb # 5: usage_00365.pdb # 6: usage_00587.pdb # 7: usage_00588.pdb # 8: usage_00590.pdb # # Length: 64 # Identity: 19/ 64 ( 29.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 64 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 64 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 QYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQL 60 usage_00087.pdb 1 MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAAL 60 usage_00171.pdb 1 -VVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAAL 59 usage_00279.pdb 1 MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAAL 60 usage_00365.pdb 1 QYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQL 60 usage_00587.pdb 1 TVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRESEQQIYDAL 60 usage_00588.pdb 1 TVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIED-----STRESEQQIYDAL 55 usage_00590.pdb 1 MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAAL 60 R APSP G H G AL AR G RIED I L usage_00021.pdb 61 EHYG 64 usage_00087.pdb 61 KWLG 64 usage_00171.pdb 60 KWL- 62 usage_00279.pdb 61 KWLG 64 usage_00365.pdb 61 EHYG 64 usage_00587.pdb 61 RWLG 64 usage_00588.pdb 56 RWLG 59 usage_00590.pdb 61 KWLG 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################