################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:46:17 2021 # Report_file: c_0267_5.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00014.pdb # 7: usage_00015.pdb # 8: usage_00016.pdb # 9: usage_00028.pdb # 10: usage_00029.pdb # 11: usage_00030.pdb # 12: usage_00031.pdb # 13: usage_00032.pdb # 14: usage_00033.pdb # 15: usage_00034.pdb # 16: usage_00070.pdb # 17: usage_00071.pdb # # Length: 172 # Identity: 68/172 ( 39.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/172 ( 60.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/172 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIA 60 usage_00002.pdb 1 PAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIA 60 usage_00003.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00012.pdb 1 GDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIA 60 usage_00013.pdb 1 GDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIA 60 usage_00014.pdb 1 GDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIA 60 usage_00015.pdb 1 GDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIA 60 usage_00016.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00028.pdb 1 -AQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIA 59 usage_00029.pdb 1 PAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIA 60 usage_00030.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00031.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00032.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00033.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00034.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00070.pdb 1 PAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIA 60 usage_00071.pdb 1 GNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIA 60 qm kS MGkP ihV NYRv swGFLaG I EGs NAGL DQRl mqWVaDNIA usage_00001.pdb 61 GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGT- 119 usage_00002.pdb 61 GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGT- 119 usage_00003.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00012.pdb 61 GFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPLFRAAIMQSGCMVPSDPVDGT- 119 usage_00013.pdb 61 GFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPLFRAAIMQSGCMVPSDPVDGT- 119 usage_00014.pdb 61 GFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPLFRAAIMQSGCMVPSDPVDGT- 119 usage_00015.pdb 61 GFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPLFRAAIMQSGCMVPSDPVDGT- 119 usage_00016.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00028.pdb 60 GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGT- 118 usage_00029.pdb 61 GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGT- 119 usage_00030.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00031.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00032.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00033.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00034.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00070.pdb 61 AFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQSGAMVPSDAVDGI- 119 usage_00071.pdb 61 NFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDS-SSV 119 FGGDP KVtI GESAGsMS h wndGDNTY GKpLFra ImQSG mvPsd v g usage_00001.pdb 120 ---YGNEIYDLFVSSAGCG-SAS--DKLACLRSA------------------ 147 usage_00002.pdb 120 ---YGNEIYDLFVSSAGCG-SAS--DKLACLRSA------------------ 147 usage_00003.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00012.pdb 120 ---YGTEIYNQVVASAGCG-SAS--DKLACLRGLSQDTLYQATS-------- 157 usage_00013.pdb 120 ---YGTEIYNQVVASAGCG-SAS--DKLACLRGLSQDTLYQATSD------- 158 usage_00014.pdb 120 ---YGTEIYNQVVASAGCG-SAS--DKLACLRGLSQDTLYQATSD------- 158 usage_00015.pdb 120 ---YGTEIYNQVVASAGCG-SAS--DKLACLRGLSQDTLYQATS-------- 157 usage_00016.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00028.pdb 119 ---YGNEIYDLFVSSAGCG-SAS--DKLACLRSASSDTLLDATNN------- 157 usage_00029.pdb 120 ---YGNEIYDLFVSSAGCG-SAS--DKLACLRSASSDTLLDATNN------- 158 usage_00030.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00031.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00032.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00033.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00034.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00070.pdb 120 ---YGNEIFDLLASNAGCG-SAS--DKLACLRGVSSDTLEDATNNT------ 159 usage_00071.pdb 120 GPD---ISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDLF 168 ei AGCg SAS DkLaCLR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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