################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:07 2021 # Report_file: c_0111_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00013.pdb # 9: usage_00014.pdb # 10: usage_00015.pdb # # Length: 127 # Identity: 54/127 ( 42.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/127 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/127 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -VFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGW 59 usage_00003.pdb 1 ATFNIQNHCSYTVWAAA-VPGGGMQLGSGQSWSLNVNAGTTGGRVWARTNCNFDASGNGK 59 usage_00006.pdb 1 ATFTIRNNCPYTIWAAA-VPGGGRRLNSGQTWTINVAPGTAGARIWPRTNCNFDGAGRGR 59 usage_00007.pdb 1 -TFDILNKCTYTVWAAA-SPGGGRRLDSGQSWTITVNPGTTNARIWGRTSCTFDANGRGK 58 usage_00008.pdb 1 -TFDILNKCTYTVWAAA-SPGGGRRLDSGQSWTITVNPGTTNARIWGRTSCTFDANGRGK 58 usage_00011.pdb 1 -TFDILNKCTYTVWAAA-SPGGGRRLDSGQSWTITVNPGTTNARIWGRTSCTFDANGRGK 58 usage_00012.pdb 1 -TFDILNKCTYTVWAAA-SPGGGRRLDSGQSWTITVNPGTTNARIWGRTSCTFDANGRGK 58 usage_00013.pdb 1 ATFEIVNRCSYTVWAAA-VPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGR 59 usage_00014.pdb 1 -TFNIINNCPFTVWAAA-VPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGK 58 usage_00015.pdb 1 -VFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGS 59 F N C TvWAAa GGG L Gq W GT R W RT C FD GrG usage_00001.pdb 60 CQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC 119 usage_00003.pdb 60 CETGDCGGLLQCTAYGTPPNTLAEFALNQFSNLDFFDISLVDGFNVPMAFNPTSNGCTRG 119 usage_00006.pdb 60 CQTGDCNGVLECKGYGQPPNTLAEYALNQFQNLDFFDISLVDGFNVPMEFSPVSGSGDKC 119 usage_00007.pdb 59 CETGDCNGLLECQGYGSPPNTLAEFALNQPNNLDYIDISLVDGFNIPMDFSGCRG--IQC 116 usage_00008.pdb 59 CETGDCNGLLECQGYGSPPNTLAEFALNQPNNLDYIDISLVDGFNIPMDFSGCRG--IQC 116 usage_00011.pdb 59 CETGDCNGLLECQGYGSPPNTLAEFALNQPNNLDYIDISLVDGFNIPMDFSGCRG--IQC 116 usage_00012.pdb 59 CETGDCNGLLECQGYGSPPNTLAEFALNQPNNLDYIDISLVDGFNIPMDFSGCRG--IQC 116 usage_00013.pdb 60 CQTGDCGGVLSCTAYGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGCRGI 119 usage_00014.pdb 59 CQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRG 118 usage_00015.pdb 60 CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSR 119 C TGDC G L C G pPNTLAE ALnQ NLD DISl DGFN pM F usage_00001.pdb 120 HGIQC-- 124 usage_00003.pdb 120 -ISCTAD 125 usage_00006.pdb 120 -RAIR-C 124 usage_00007.pdb ------- usage_00008.pdb ------- usage_00011.pdb 117 ----SVD 119 usage_00012.pdb 117 ----SVD 119 usage_00013.pdb 120 -RC---- 121 usage_00014.pdb 119 -IKC--- 121 usage_00015.pdb 120 -GPRC-- 123 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################