################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:36 2021 # Report_file: c_1268_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00040.pdb # 6: usage_00111.pdb # 7: usage_00126.pdb # 8: usage_00148.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 28 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 28 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 D---AVYIPLPTSQHIEWSIKAADAG-- 23 usage_00013.pdb 1 D---AVYIPLPTSQHIEWSIKAADAG-- 23 usage_00014.pdb 1 D---AVYIPLPTSQHIEWSIKAADAG-- 23 usage_00015.pdb 1 D---AVYIPLPTSQHIEWSIKAADAG-- 23 usage_00040.pdb 1 E---LVIVTTPSGLHYEHTMACIQAG-- 23 usage_00111.pdb 1 Q---PVVILIPSD-VEWFLELKAKG--- 21 usage_00126.pdb 1 -DQVLFPYPDDNGQRKNIEKLLSHLERG 27 usage_00148.pdb 1 N---ASVIFVPAPFAKDAVFEAIDAG-- 23 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################