################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:11 2021 # Report_file: c_1400_27.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00179.pdb # 2: usage_00352.pdb # 3: usage_00376.pdb # 4: usage_00377.pdb # 5: usage_00724.pdb # 6: usage_00725.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 43 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 43 ( 67.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 DIA----S-----------FTPIFVMSRITGWTAHIMEQATA- 27 usage_00352.pdb 1 ---HGTPPTASDVVGMP--QWQEYTAMLRER--------F--- 27 usage_00376.pdb 1 ---VGTVA-----KYTRVVTMQEFTKKIMPT--------VW-P 26 usage_00377.pdb 1 ---VGTVA-----KYTRVVTMQEFTKKIMPT--------VW-P 26 usage_00724.pdb 1 ---VGTVA-----KYTRVVTMQEFTKKIMPT--------VW-- 25 usage_00725.pdb 1 ---VGTVA-----KYTRVVTMQEFTKKIMPT--------VW-P 26 qeft #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################