################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:22:43 2021 # Report_file: c_0932_204.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00077.pdb # 4: usage_00079.pdb # 5: usage_00080.pdb # 6: usage_00082.pdb # 7: usage_00157.pdb # 8: usage_00214.pdb # 9: usage_00494.pdb # 10: usage_00497.pdb # 11: usage_00498.pdb # 12: usage_00538.pdb # 13: usage_00588.pdb # 14: usage_00589.pdb # 15: usage_00590.pdb # 16: usage_00643.pdb # 17: usage_00746.pdb # 18: usage_00814.pdb # 19: usage_00939.pdb # 20: usage_01062.pdb # 21: usage_01579.pdb # 22: usage_01582.pdb # 23: usage_01933.pdb # 24: usage_02045.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 57 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 57 ( 59.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 --SVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 40 usage_00039.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00077.pdb 1 ---VSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 39 usage_00079.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00080.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT------ 39 usage_00082.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00157.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00214.pdb 1 ---VSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 39 usage_00494.pdb 1 ----------KVL-KIQLRS----A-SATVPTKGSATAAG---YDI-YASQDITI-P 36 usage_00497.pdb 1 -NSVSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 41 usage_00498.pdb 1 -NSVSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 41 usage_00538.pdb 1 EKVLYDAPTKFQHLTIFESD-PK-G-PWGTVMA-L-----D--GCI-QVTD------ 39 usage_00588.pdb 1 ---VSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 39 usage_00589.pdb 1 ---VSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 39 usage_00590.pdb 1 ---VSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 39 usage_00643.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00746.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00814.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_00939.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_01062.pdb 1 ---ELKPTPEGNL-EILLQKWENGECAQKKIIA-E-----KTKI--PAVFK----ID 41 usage_01579.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_01582.pdb 1 -NSVSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 41 usage_01933.pdb 1 ---VSVDLPGSMK-VLVSKSSNA-D-GKYDLIA-T-----VD-ALE-LSGT----SD 39 usage_02045.pdb 1 -NSVSVDLPGEMK-VLVSKEKNK-D-GKYDLIA-T-----VD-KLE-LKGT----SD 41 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################