################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:49 2021 # Report_file: c_0836_79.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00352.pdb # 5: usage_00464.pdb # 6: usage_00465.pdb # # Length: 54 # Identity: 4/ 54 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 54 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 54 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --GKALRFLRERMNWKKEEIV-VFGDNENDLFMFEEAGLRVAMENAIEKVKEAS 51 usage_00071.pdb 1 -KAEGIR--IEKLGIDKKDVY-AFGDGLNDIE-LSFVGTGVA-GNAHEEVKRVA 48 usage_00072.pdb 1 -KAEGIR--IEKLGIDKKDVY-AFGDGLNDIE-LSFVGTGVA-GNAHEEVKRVA 48 usage_00352.pdb 1 SKGGTLSELVDQLGLTADDVTL----QGNDLT-IKYAGLGVA----IDEVKEAA 45 usage_00464.pdb 1 -KGKAIKRLQERLGVTQKETI-CFGDGQNDIV-FQASDVTIA-KNSHQQLKDIA 50 usage_00465.pdb 1 -KGKAIKRLQERLGVTQKETI-CFGDGQNDIV-FQASDVTIA-KNSHQQLKDIA 50 e lg ND A K a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################