################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:47 2021 # Report_file: c_0110_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00110.pdb # 2: usage_00111.pdb # 3: usage_00114.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00117.pdb # 7: usage_00118.pdb # 8: usage_00119.pdb # 9: usage_00120.pdb # # Length: 256 # Identity: 173/256 ( 67.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 173/256 ( 67.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/256 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00110.pdb 1 PEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQD 60 usage_00111.pdb 1 PEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQD 60 usage_00114.pdb 1 PEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 60 usage_00115.pdb 1 PEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 60 usage_00116.pdb 1 -----------------------PPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 37 usage_00117.pdb 1 -----------------------PPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 37 usage_00118.pdb 1 -----------------------PPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 37 usage_00119.pdb 1 PEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 60 usage_00120.pdb 1 -----------------------PPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 37 PP L RLFRTKTW DHVAAWD IF KA YT FY usage_00110.pdb 61 LRRKTEFR-NYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLN 119 usage_00111.pdb 61 LRRKTEFR-NYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLN 119 usage_00114.pdb 61 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 120 usage_00115.pdb 61 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 120 usage_00116.pdb 38 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 97 usage_00117.pdb 38 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 97 usage_00118.pdb 38 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 97 usage_00119.pdb 61 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 120 usage_00120.pdb 38 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 97 LR K Y GILY LL KM ED KAN TEMLAGGV TTSMTLQWHLYEMAR L usage_00110.pdb 120 VQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDY 179 usage_00111.pdb 120 VQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDY 179 usage_00114.pdb 121 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 180 usage_00115.pdb 121 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 180 usage_00116.pdb 98 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 157 usage_00117.pdb 98 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 157 usage_00118.pdb 98 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 157 usage_00119.pdb 121 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 180 usage_00120.pdb 98 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 157 VQ MLR EVL AR QA GD MLQ VPLLKASIKETLRLHPISVTLQRY DLVL DY usage_00110.pdb 180 LIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRI 239 usage_00111.pdb 180 LIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRI 239 usage_00114.pdb 181 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 240 usage_00115.pdb 181 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 240 usage_00116.pdb 158 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 217 usage_00117.pdb 158 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 217 usage_00118.pdb 158 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 217 usage_00119.pdb 181 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 240 usage_00120.pdb 158 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRI 217 IPAKTLVQVAIYA GR P FF P FDPTRWLSKDK FRNLGFGWGVRQC GRRI usage_00110.pdb 240 AELEMTLFLIHILENF 255 usage_00111.pdb 240 AELEMTLFLIHILEN- 254 usage_00114.pdb 241 AELEMTIFLINMLENF 256 usage_00115.pdb 241 AELEMTIFLINMLENF 256 usage_00116.pdb 218 AELEMTIFLINMLENF 233 usage_00117.pdb 218 AELEMTIFLINMLENF 233 usage_00118.pdb 218 AELEMTIFLINMLEN- 232 usage_00119.pdb 241 AELEMTIFLINMLENF 256 usage_00120.pdb 218 AELEMTIFLINMLENF 233 AELEMT FLI LEN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################