################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:18 2021 # Report_file: c_0650_14.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # # Length: 80 # Identity: 62/ 80 ( 77.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 80 ( 78.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 80 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 KIDFVRFKIRDDSGTVLFEIKKPSERLPINRRDL---AG-RFVRYQFTPAFLRLRQVGAT 56 usage_00139.pdb 1 KIDFVRFKIRDDSGTVLFEIKKP-----------PPNAG-RFVRYQFTPAFLRLRQVGAT 48 usage_00140.pdb 1 KIDFVRFKIRDDSGTVLFEIKK----------------AGRFVRYQFTPAFLRLRQVGAT 44 usage_00141.pdb 1 KIDFVRFKIRDDSGTVLFEIKKP---------------G-RFVRYQFTPAFLRLRQVGAT 44 KIDFVRFKIRDDSGTVLFEIKK g RFVRYQFTPAFLRLRQVGAT usage_00138.pdb 57 VEFTVGDKPVNNFRIERHYF 76 usage_00139.pdb 49 VEFTVGDKPVNNFRIERHYF 68 usage_00140.pdb 45 VEFTVGDKPVNNFRIERHYF 64 usage_00141.pdb 45 VEFTVGDKPVNNFRIERHYF 64 VEFTVGDKPVNNFRIERHYF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################