################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:09 2021 # Report_file: c_0514_88.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00372.pdb # 2: usage_00437.pdb # 3: usage_00438.pdb # # Length: 110 # Identity: 15/110 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/110 ( 65.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/110 ( 34.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00372.pdb 1 --GIERTLQEIE-K-ADIVLFVLDASSP---LDEEDRKILERIKNKRYLVVINKVDVVEK 53 usage_00437.pdb 1 SPEEKVARDYLLSQRADSILNVVDATNLERNLY-LTTQLIETG--IPVTIALNM------ 51 usage_00438.pdb 1 SPEEKVARDYLLSQRADSILNVVDATNLERNLY-LTTQLIETG--IPVTIALNM------ 51 eekvardyll q ADsiLnVvDAtnl Ly lttqliEtg ipvtialNm usage_00372.pdb 54 I-----------NEEEIKNKLGTDR-HMVKISALKGEGLEKLEESIYRET 91 usage_00437.pdb 52 -IDV--KINVDKLSYHLG-------VPVVATSALKQTGVDQVVKKAAH-- 89 usage_00438.pdb 52 -IDVLDKINVDKLSYHLG-------VPVVATSALKQTGVDQVVKKAAHT- 92 lsyhlg pvVatSALKqtGvdqvvkkaah #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################