################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:25:47 2021 # Report_file: c_0711_21.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00030.pdb # 2: usage_00032.pdb # 3: usage_00036.pdb # 4: usage_00051.pdb # 5: usage_00062.pdb # 6: usage_00129.pdb # 7: usage_00130.pdb # 8: usage_00204.pdb # 9: usage_00205.pdb # 10: usage_00206.pdb # 11: usage_00336.pdb # 12: usage_00373.pdb # 13: usage_00390.pdb # 14: usage_00412.pdb # 15: usage_00413.pdb # # Length: 56 # Identity: 31/ 56 ( 55.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 56 ( 55.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 56 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRV- 55 usage_00032.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00036.pdb 1 NLTLTHFKGPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRK-- 54 usage_00051.pdb 1 --SLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIK--- 51 usage_00062.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIK--- 53 usage_00129.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRV- 55 usage_00130.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00204.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00205.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00206.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00336.pdb 1 NLTLTHFKGPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIR--- 53 usage_00373.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00390.pdb 1 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVS 56 usage_00412.pdb 1 NLTLTHFKGPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRK-- 54 usage_00413.pdb 1 NLTLTHFKGPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRKV- 55 LT GP Y VED YVQENSMVY G G T GATWTP TA L K I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################