################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:21 2021 # Report_file: c_0513_68.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00581.pdb # 4: usage_01004.pdb # 5: usage_01005.pdb # 6: usage_01006.pdb # # Length: 87 # Identity: 37/ 87 ( 42.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 87 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 87 ( 3.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --LLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAH 58 usage_00034.pdb 1 --LLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAH 58 usage_00581.pdb 1 -AQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAH 59 usage_01004.pdb 1 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYAN 60 usage_01005.pdb 1 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYAN 60 usage_01006.pdb 1 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYAN 60 IP A GER Y RWG LE Si V QPDl CGG TE KKI D A usage_00033.pdb 59 IFEVTVQAHVAGTGVAEAASLHAEIAI 85 usage_00034.pdb 59 IFEVTVQAHVAGTGVAEAASLHAEIAI 85 usage_00581.pdb 60 VYDKTVQIHVCGGPISTAVALHMETAI 86 usage_01004.pdb 61 IYDTTVQVHVCGGPVSTVAALHMETA- 86 usage_01005.pdb 61 IYDTTVQVHVCGGPVSTVAALHMETAI 87 usage_01006.pdb 61 IYDTTVQVHVCGGPVSTVAALHMETAI 87 i TVQ HV G v a LH E A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################