################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:19 2021 # Report_file: c_1218_27.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00139.pdb # 2: usage_00174.pdb # 3: usage_00186.pdb # 4: usage_00187.pdb # 5: usage_00200.pdb # 6: usage_00524.pdb # 7: usage_00674.pdb # 8: usage_00696.pdb # 9: usage_00710.pdb # # Length: 53 # Identity: 3/ 53 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 53 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 53 ( 45.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 KIVEDILRGK-KLKFKTDS------------GVFSYGKV----DKGTKILVEN 36 usage_00174.pdb 1 DTVKLMYKGQPMTFRLLK-VDTPETKHPKKGVEKYGPE-ASAFTKKMVENA-- 49 usage_00186.pdb 1 DTVKLMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFRKKMVENA-- 43 usage_00187.pdb 1 DTVKLMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFRKKMVENA-- 43 usage_00200.pdb 1 DTVKAMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFTKKMAENA-- 43 usage_00524.pdb 1 DTVKLMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFTKGMK----- 40 usage_00674.pdb 1 DTVKLMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFTKKMTENA-- 43 usage_00696.pdb 1 DTVKAMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFTKKMVENA-- 43 usage_00710.pdb 1 DTVKKMYKGQPMTFRLLL-VDTPEF------NEKYGPE-ASAFTKKMVENA-- 43 dtVk mykGq mtfrll ekygpe K m #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################