################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:36:05 2021 # Report_file: c_0118_21.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00027.pdb # 4: usage_00029.pdb # 5: usage_00034.pdb # 6: usage_00035.pdb # 7: usage_00081.pdb # 8: usage_00084.pdb # 9: usage_00136.pdb # 10: usage_00159.pdb # 11: usage_00160.pdb # 12: usage_00275.pdb # 13: usage_00320.pdb # 14: usage_00352.pdb # 15: usage_00367.pdb # 16: usage_00426.pdb # 17: usage_00439.pdb # 18: usage_00486.pdb # 19: usage_00498.pdb # 20: usage_00514.pdb # 21: usage_00515.pdb # # Length: 129 # Identity: 45/129 ( 34.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/129 ( 45.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/129 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFTSTGISWVRQAPGKGLEWVGRTHLGDGSTNY 59 usage_00018.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFTSTGISWVRQAPGKGLEWVGRTHLGDGSTNY 59 usage_00027.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQSPGKGLEWVARIYPTNGYTRY 59 usage_00029.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 59 usage_00034.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIDDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 58 usage_00035.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIDDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 58 usage_00081.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQSPGKGLEWVARIYPTNGYTRY 59 usage_00084.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTISGYGIHWVRQAPGKGLEWVAYIYPDSGYTDY 59 usage_00136.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 58 usage_00159.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTINASWIHWVRQAPGKGLEWVGAIYPYSGYTNY 58 usage_00160.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTINASWIHWVRQAPGKGLEWVGAIYPYSGYTNY 58 usage_00275.pdb 1 -IQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTRY 59 usage_00320.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSSYWIHWVRQAPGKGLEWVARINPPNRSNQY 59 usage_00352.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRY 58 usage_00367.pdb 1 QVQLQQSGDELVKPGASVKLSCTVSGFNIKDDFIHWMKQRPEQGLEWIGRIDPANGYTKY 60 usage_00426.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYITPYYGSTSY 59 usage_00439.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 59 usage_00486.pdb 1 --QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKY 58 usage_00498.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNY 59 usage_00514.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 59 usage_00515.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 58 QL SG LV PG S LSC aSGF i Wv q P GlEW g t Y usage_00017.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTYGIYD--LYVD-YTEYVMDYW 116 usage_00018.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTYGIYD--LYVD-YTEYVMDYW 116 usage_00027.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAIYYCSRWGG-----DG----F-YAMDYW 109 usage_00029.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDYW 109 usage_00034.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDVW 108 usage_00035.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRW---------------YAMDVW 103 usage_00081.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAIYYCSRWGG-----DG----F-YAMDYW 109 usage_00084.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAREDF-----RNRR-RLWYVMDYW 113 usage_00136.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDYW 108 usage_00159.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGH-----ST----SPWAMDYW 109 usage_00160.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGH-----ST----SPWAMDYW 109 usage_00275.pdb 60 GPKFLGKATITADTSSNTAYLHLNSLTSEDTAVYFCARWV--------------RQMDYW 105 usage_00320.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSG-----------FRWVMDYW 108 usage_00352.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGG------------FYAMDYW 106 usage_00367.pdb 61 APKFQDKATMTADTSSNTAYLQLSSLASEDAAVYYCATY----------------GVAYW 104 usage_00426.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAREYY-----RW----Y-TAIDYW 109 usage_00439.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDYW 109 usage_00486.pdb 59 DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASY----------------YGIYW 102 usage_00498.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSG--HVNAV--KNYGYVMDYW 115 usage_00514.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDYW 109 usage_00515.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGG-----DG----F-YAMDYW 108 g Ti ADTS NTAYLq SL EDtA YyC W usage_00017.pdb 117 GQGTLVTVS 125 usage_00018.pdb 117 GQGTLVTVS 125 usage_00027.pdb 110 GQGTLVTV- 117 usage_00029.pdb 110 GQGTLVTVS 118 usage_00034.pdb 109 GQGTLVTVS 117 usage_00035.pdb 104 GQGTLVTVS 112 usage_00081.pdb 110 GQGTLVTV- 117 usage_00084.pdb 114 GQGTLVTV- 121 usage_00136.pdb 109 GQGTLVTV- 116 usage_00159.pdb 110 GQGTLVTVS 118 usage_00160.pdb 110 GQGTLVTV- 117 usage_00275.pdb 106 GQGTSVTV- 113 usage_00320.pdb 109 GQGTLVTVS 117 usage_00352.pdb 107 GQGTLVTVS 115 usage_00367.pdb 105 GQGTLVTV- 112 usage_00426.pdb 110 GQGTLVTVS 118 usage_00439.pdb 110 GQGTLVTVS 118 usage_00486.pdb 103 GQGTTLTVS 111 usage_00498.pdb 116 GQGTLVTV- 123 usage_00514.pdb 110 GQGTLVTVS 118 usage_00515.pdb 109 GQGTLVTVS 117 GQGT vTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################