################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:38 2021 # Report_file: c_0790_39.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00711.pdb # 2: usage_00713.pdb # 3: usage_00849.pdb # 4: usage_00850.pdb # 5: usage_00931.pdb # 6: usage_00979.pdb # 7: usage_00998.pdb # 8: usage_01000.pdb # 9: usage_01007.pdb # # Length: 95 # Identity: 17/ 95 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 95 ( 44.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 95 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00711.pdb 1 -TFLRIVGSELIQKYLGDGPRLCRQI-FKVAGENAPSIVFIDEIDAIGTKRY----DSN- 53 usage_00713.pdb 1 -TFIRVIGSELVQKYVGEGARMVREL-FEMARTKKACIIFFDEIDAVGGARFDDGA---- 54 usage_00849.pdb 1 -TFLRVVGSELIQKYLGDGPKLVREL-FRVAEEHAPSIVFIDEIDAIGTKRY----DSNS 54 usage_00850.pdb 1 -TFLRVVGSELIQKYLG-DGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY----DSNS 54 usage_00931.pdb 1 -TFLRIVGSELIQKYLGDGPRLCRQI-FKVAGENAPSIVFIDEIDAIGTKRY----DSN- 53 usage_00979.pdb 1 -SVHAVKGSELMDKWVGSSEKAVREL-FARARDSAPSLVFLDEIDALAPR---------- 48 usage_00998.pdb 1 -TFLRIVGSELIQKYLGDGPRLCRQI-FKVAGENAPSIVFIDEIDAIGTKRY----DSN- 53 usage_01000.pdb 1 -TFLKLAGPQLVQMFIGDGAKLVRDA-FALAKEKAPSIIFIDELDAIGTKRF----D-S- 52 usage_01007.pdb 1 ATFLRVVGSELIQKYLGDGPKLVREL-FRVAEEHAPSIVFIDEIDAIGTKRY----DSNS 55 tf GseL qk G r F A apsi F DEiDA g usage_00711.pdb 54 SG-GEREIQRTMLELLNQLDGFDDRGDVKVIMAT- 86 usage_00713.pdb 55 --GGDNEVQRTMLELITQLDGFDPRGNIKVMFAT- 86 usage_00849.pdb 55 G--GEREIQRTMLELLNQLDGFDSRGDVKVIMAT- 86 usage_00850.pdb 55 G--GEREIQRTMLELLNQLDGFDSRGDVKVIMATN 87 usage_00931.pdb 54 SG-GEREIQRTMLELLNQLDGFDDRGDVKVIMAT- 86 usage_00979.pdb 49 -----GVTDKVVASLLTELDGIEPLRDVVVLGATN 78 usage_00998.pdb 54 SG-GEREIQRTMLELLNQLDGFDDRGDVKVIMAT- 86 usage_01000.pdb 53 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATN 87 usage_01007.pdb 56 G--GEREIQRTMLELLNQLDGFDSRGDVKVIMATN 88 e qrtmleLl qLDGf vkV AT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################