################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:52 2021 # Report_file: c_0950_9.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00040.pdb # 7: usage_00160.pdb # 8: usage_00161.pdb # 9: usage_00538.pdb # # Length: 75 # Identity: 13/ 75 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 75 ( 32.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 75 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 GSCFHRIIPGF-CQGGDFTRH-----NGTGGKSIY--GEKFEDEN-FILKHTGPGILSAN 51 usage_00034.pdb 1 GSCFHRIIPGFMCQGGDFTRH-----NGTGGKSIY--GEKFEDEN-FILKHTGPGILSMA 52 usage_00035.pdb 1 GSCFHRIIPGFMCQGGDFTRH-----NGTGGKSIY--GEKFEDEN-FILKHTGPGILSMA 52 usage_00036.pdb 1 GSCFHRIIPGFMCQGGDFTRH-----NGTGGKSIY--GEKFEDEN-FILKHTGPGILSMA 52 usage_00037.pdb 1 GSCFHRIIPGFMCQGGDFTRH-----NGTGGKSIY--GEKFEDEN-FILKHTGPGILSMA 52 usage_00040.pdb 1 DSIFHRVIQNFMIQGGDFTNF-----DGTGGKSIY--GEKFADEN-LNVKHFV-GALSMA 51 usage_00160.pdb 1 NTIFHRVINGFMIQGGGF-EP-----GMKQKATK----EPIKNEANNGLKNTR-GTLAMA 49 usage_00161.pdb 1 NSIFHRIIPQFMCQGGDITNG-----NGSGGESIY--GRSFTDEN-FNMKHDQPGLLSMA 52 usage_00538.pdb 1 DTIFHRCIRNFMIQGGRAELRQPQQS-PR-SISGFPGGAPFEDEFDNRLVHQGIGVLSMA 58 FHR I F QGG s f dE kh G Lsma usage_00033.pdb 52 AG-PNTNG-SQFFIC 64 usage_00034.pdb 53 NA-GPNTNGSQFFIC 66 usage_00035.pdb 53 NA-GPNTNGSQFFIC 66 usage_00036.pdb 53 NA-GPNTNGSQFFIC 66 usage_00037.pdb 53 NA-GPNTNGSQFFIC 66 usage_00040.pdb 52 NA-GPNTNGSQFFIT 65 usage_00160.pdb 50 RTQAPHSATAQFFIN 64 usage_00161.pdb 53 NA-GPNTNSSQFLIT 66 usage_00538.pdb 59 ND-GKHSNLSEFFIT 72 sqFfI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################