################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:07 2021 # Report_file: c_0390_23.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00054.pdb # 2: usage_00055.pdb # 3: usage_00056.pdb # 4: usage_00268.pdb # 5: usage_00270.pdb # 6: usage_00271.pdb # 7: usage_00272.pdb # 8: usage_00274.pdb # 9: usage_00276.pdb # 10: usage_00286.pdb # # Length: 95 # Identity: 75/ 95 ( 78.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 95 ( 78.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 95 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 PEELLCFTERLEDLVCFWEEA-ASAGVGPGNYSFSYQLEDEPWKLCRLHQAPTARGAVRF 59 usage_00055.pdb 1 ---LLCFTERLEDLVCFWEEA-ASAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 56 usage_00056.pdb 1 ---LLCFTERLEDLVCFWEEA-ASAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 56 usage_00268.pdb 1 ---LLCFTERLEDLVCFWEEA-ASAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 56 usage_00270.pdb 1 ---LLCFTERLEDLVCFWEEA-P------GQYSFSYQLEDEPWKLCRLHQAPTA-GAVRF 49 usage_00271.pdb 1 ---LLCFTERLEDLVCFWEEAAP------GQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 51 usage_00272.pdb 1 ---LLCFTERLEDLVCFWEEA-P------GQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 50 usage_00274.pdb 1 ---LLCFTERLEDLVCFWEEA-P------GQYSFSYQLEDEPWKLCRLHQAPTARGAVRF 50 usage_00276.pdb 1 ---LLCFTERLEDLVCFWEEA-P------GQYSFSYQLEDEPWKLCRLHQAPTA--AVRF 48 usage_00286.pdb 1 ----LCFTERLEDLVCFWEEA-ASAGVGPGNYSFSYQLEDEPWKLCRLHQAPTARGAVRF 55 LCFTERLEDLVCFWEEA G YSFSYQLEDEPWKLCRLHQAPTA AVRF usage_00054.pdb 60 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 90 usage_00055.pdb 57 WCSLPTADTSSFVPLELRVTAASGAPRYHR----- 86 usage_00056.pdb 57 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 87 usage_00268.pdb 57 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 87 usage_00270.pdb 50 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 80 usage_00271.pdb 52 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 82 usage_00272.pdb 51 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 81 usage_00274.pdb 51 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 81 usage_00276.pdb 49 WCSLPTADTSSFVPLELRVTAASGAPRYHRV---- 79 usage_00286.pdb 56 WCSLPTADTSSFVPLELRVTAASGAPRYHRVIHIN 90 WCSLPTADTSSFVPLELRVTAASGAPRYHR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################