################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:42 2021 # Report_file: c_1313_38.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00483.pdb # 10: usage_00484.pdb # 11: usage_00485.pdb # 12: usage_00486.pdb # 13: usage_00489.pdb # 14: usage_00571.pdb # 15: usage_00626.pdb # 16: usage_00730.pdb # 17: usage_00731.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 47 ( 4.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 47 ( 80.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -QPVRDALS-------R-SGIRFDDGREVELKGFSGTYRL-F----- 32 usage_00019.pdb 1 SQPVRDAL-----------GIRFDDGREVELKGFSGTYRL-F----- 30 usage_00020.pdb 1 -QPVRDALS----------GIRFDDGREVELKGFSGTYRL-F----- 30 usage_00021.pdb 1 SQPVRDALSR------S-DGIRFDDGREVELKGFSGTYRL-FA---- 35 usage_00022.pdb 1 SQPVRDAL-----------GIRFDDGREVELKGFSGTYRL-F----- 30 usage_00023.pdb 1 -QPVRDALS-------R--GIRFDDGREVELKGFSGTYRL-FA---- 32 usage_00024.pdb 1 -QPVRDALS----------GIRFDDGREVELKGFSGTYRL-F----- 30 usage_00025.pdb 1 SQPVRDALS-------R---IRFDDGREVELKGFSGTYRL-F----- 31 usage_00483.pdb 1 -QPVRDALS-------RSDGIRFDDGREVELKGFSGTYRL-FAVLA- 37 usage_00484.pdb 1 -QPVRDALS-------RSDGIRFDDGREVELKGFSGTYRL-FAVLAS 38 usage_00485.pdb 1 -QPVRDALS-------RSDGIRFDDGREVELKGFSGTYRL-F----- 33 usage_00486.pdb 1 -QPVRDALS---------DGIRFDDGREVELKGFSGTYRL-F----- 31 usage_00489.pdb 1 SQPVRDAL--------RSDGIRFDDGREVELKGFSGTYRL-FAVLAS 38 usage_00571.pdb 1 ---SPLISY-GGEGLEFLK-------GREIKAPAFI----EK----- 27 usage_00626.pdb 1 EQRQKDRLE-------E-EGVEIYQTS-----LG-EYKLN------- 26 usage_00730.pdb 1 SQPVRDALS-------RSDGIRFDDGREVELKGFSGTYRL-F----- 34 usage_00731.pdb 1 -QPVRDALS-------RSDGIRFDDGREVELKGFSGTYRL-F----- 33 d l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################