################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:37:54 2021 # Report_file: c_0447_12.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00006.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00026.pdb # 6: usage_00034.pdb # 7: usage_00059.pdb # 8: usage_00066.pdb # 9: usage_00067.pdb # 10: usage_00068.pdb # 11: usage_00084.pdb # 12: usage_00138.pdb # 13: usage_00180.pdb # 14: usage_00191.pdb # 15: usage_00192.pdb # 16: usage_00231.pdb # # Length: 117 # Identity: 2/117 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/117 ( 12.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/117 ( 49.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 D-S-IKILLIGDSGVG-KSCLLVRFVE-DK---FNPS-FITTIGI----DFKIKTVD--- 45 usage_00018.pdb 1 ------IVLAG-DAAVGKSSFLMRLCKNEF--R-----------------FQMKTLIVDG 34 usage_00019.pdb 1 ----YKIVLAG-DAAVGKSSFLMRLCKNEF--R----------GV----DFQMKTLIVDG 39 usage_00020.pdb 1 --YLFKLLLIG-DSGVGKSCLLLRFADDTY--T-ESY-IS-TIGV----DFKIRTIELDG 48 usage_00026.pdb 1 -DYLFKLLLIG-DSGVGKSCLLLRFADDTY--T-ESY-IS-TIGV----DFKIRTIELDG 49 usage_00034.pdb 1 --YLFKLLLIG-DSGVGKSCLLLRFADDTY--T-ESY-IS-TIGV----DFKIRTIELDG 48 usage_00059.pdb 1 --YMFKLLLIG-NSSVGKTSFLFRYADDSF--T-PAF-VS-TVGI----DFKVKTVYRHD 48 usage_00066.pdb 1 -DYLFKLLLIG-DSGVGKTCVLFRFSE-DA---FNST-FISTIGI----DFKIRTIELDG 49 usage_00067.pdb 1 -DYLFKLLLIG-DSGVGKTCVLFRFSE-DA---FNST-FISTIGI----DFKIRTIELDG 49 usage_00068.pdb 1 -DYLFKLLLIG-DSGVGKTCVLFRFSE-DA---FNST-FISTIGI----DFKIRTIELDG 49 usage_00084.pdb 1 -DFLFKLVLVG-DASVGKTCVVQRFKTGAF-------------------DFTMKTLEI-- 37 usage_00138.pdb 1 ----FKIILLG-DGGVGKSSLMNRYVTNKF--D-SQL-FH-TIGV----EFLNKDLEVDG 46 usage_00180.pdb 1 -----KLLLIG-DSGVGKSCLLLRFADDTY-------TIS-TIGV----DFKIR------ 36 usage_00191.pdb 1 --SVLLCKVVG-ACGVGKSAFLQAFLG-RGLG-HQDT-REQPP------GYAIDTVQVNG 48 usage_00192.pdb 1 --LLFKLLLIG-DSGVGKTCVLFRFSDDAF--N-TTF-IS-TIGI----DFKIKTVELQG 48 usage_00231.pdb 1 --VAIKMVVVG-NGAVGKSSMIQRYCKGIF--T-KDY-KK-----TIGVDFLERQIQVND 48 G v K r f usage_00006.pdb 46 ---KLQLWDTAGQERFRTIT-TAYYRGA-GIILVYDVTDERTFTNIKQWFKTVNE-- 95 usage_00018.pdb 35 ERTVLQLWDTAGQERFRSIA-KSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDA- 89 usage_00019.pdb 40 ERTVLQLWDTAGQERFRSIA-KSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDA- 94 usage_00020.pdb 49 KTIKLQIWDTAGQERFRTIT-SSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-- 102 usage_00026.pdb 50 KTIKLQIWDTAGQERFRTIT-SSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRY- 104 usage_00034.pdb 49 KTIKLQIWDTAGQERFRTIT-SSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY- 103 usage_00059.pdb 49 KRIKLQIWDTAGQERYRTIT-TAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYS 104 usage_00066.pdb 50 KRIKLQIWDTAGQERFRTIT-TAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-- 103 usage_00067.pdb 50 KRIKLQIWDTAGQERFRTIT-TAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-- 103 usage_00068.pdb 50 KRIKLQIWDTAGQERFRTIT-TAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-- 103 usage_00084.pdb 38 -RVKLQIWDTAGQERFRTIT-QSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKY- 91 usage_00138.pdb 47 HFVTMQIWDTAGQERFRSLR-TPFYRGSDCCLLTFSVDDSQSFQNL----------- 91 usage_00180.pdb 37 ------IWDTAGQERFRTIT-SSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY- 85 usage_00191.pdb 49 QEKYLILCEVGTDGLLATSLD----ATCDVACLMFDGSDPKSFAHCASVYKHHY--- 98 usage_00192.pdb 49 KKIKLQIWDTAGQERFHTIT-TSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH- 103 usage_00231.pdb 49 EDVRLMLWDTAGQEEFDAIT-KAYYRGAQACVLVFSTTDRESFEAI----------- 93 wdtagqe r s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################