################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:03 2021 # Report_file: c_0645_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00052.pdb # 2: usage_00185.pdb # 3: usage_00276.pdb # 4: usage_00277.pdb # 5: usage_00278.pdb # 6: usage_00368.pdb # 7: usage_00958.pdb # # Length: 76 # Identity: 5/ 76 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 76 ( 52.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 76 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 TVQYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 50 usage_00185.pdb 1 TVQYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 50 usage_00276.pdb 1 --QYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 48 usage_00277.pdb 1 --QYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 48 usage_00278.pdb 1 --QYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 48 usage_00368.pdb 1 TVQYLERFS-ARVLSPLDFRRYPF----DSQTLHI-YLIVRSVDTRNIVLAVD----LEK 50 usage_00958.pdb 1 --ALHLKRFSYRVVFPLE------LRLFPDRMYDLVAVVVHC-----------GSGPNRG 41 qylerfs aRVlsPLd dsqtlhi yliVrs lek usage_00052.pdb 51 VGKNDDVFLTGWDIES 66 usage_00185.pdb 51 VGKNDDVFLTGWDIES 66 usage_00276.pdb 49 VGKNDDVFLTGWDIES 64 usage_00277.pdb 49 VGKNDDVFLTGWDIES 64 usage_00278.pdb 49 VGKNDDVFLTGWDIES 64 usage_00368.pdb 51 VGKNDDVFLTGWDIES 66 usage_00958.pdb 42 HYI--AIVKSH----- 50 vgk dvfltg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################