################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:07 2021 # Report_file: c_0008_12.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00083.pdb # 2: usage_00084.pdb # 3: usage_00085.pdb # 4: usage_00094.pdb # # Length: 312 # Identity: 79/312 ( 25.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 265/312 ( 84.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/312 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 GVGTAIVTPFK-N-GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSR 58 usage_00084.pdb 1 GVGTAIVTPFK-N-GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSR 58 usage_00085.pdb 1 GVGTAIVTPFK-N-GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSR 58 usage_00094.pdb 1 GIWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIAT 60 GvgtaiVTpFk n geLDLeSyERlvrYqlenGvnaLivLGTtgEsptvnedERekLvsr usage_00083.pdb 59 TLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYI 118 usage_00084.pdb 59 TLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYI 118 usage_00085.pdb 59 TLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYI 118 usage_00094.pdb 61 ARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAY--TTPPVIKSFFDDV 118 tleiVdgkiPvivGaGtnSTektLklvkqAeklGANgVLVvtPyY pTqeglyqhykyi usage_00083.pdb 119 SERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPAAAQIDRTVSLTKQAR 178 usage_00084.pdb 119 SERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQAR 178 usage_00085.pdb 119 SERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQAR 178 usage_00094.pdb 119 SCQSPLPVVIYNFP----IDLDSDMITTIARKNPNVVGVKLTCASVGKITRLAATL---- 170 SertdLgiVvYNvP vnvlpetaarIAadlkNVVGiKeanp qIdRtvslt usage_00083.pdb 179 --SDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKL 236 usage_00084.pdb 179 --SDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSAEVHAKL 236 usage_00085.pdb 179 --SDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSAEVHAKL 236 usage_00094.pdb 171 PPAAFSVFGGQSDFLIGGLSVGSAGCIAAFANVFPKTVSKIYELYKAGKVDQAMELHRKA 230 sdFmVwsGndDrtfylLcaGgdGvIsvvsNVaPKqmvelcaeYfsGnleks EvH Kl usage_00083.pdb 237 RPLMKALFVET-NPIPVKAALNLMGFIE------------NELRLPLVPASEKTVELLRN 283 usage_00084.pdb 237 RPLMKALFVET-NPIPVKAALNLMGFIE------------NELRLPLVPASEKTVELLRN 283 usage_00085.pdb 237 RPLMKALFVET-NPIPVKAALNLMGFIE------------NELRLPLVPASEKTVELLRN 283 usage_00094.pdb 231 ALAES------PGIATTKYAAAIFS---AKAAGIEDAEEKLRPRKPYDPPSEAAKQEVRK 281 rplmk npipvKaAlnlmg nelRlPlvPaSEktvellRn usage_00083.pdb 284 VLKESG------ 289 usage_00084.pdb 284 VLKESG------ 289 usage_00085.pdb 284 VLKESG------ 289 usage_00094.pdb 282 VMAEVAAIEAGL 293 VlkEsg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################