################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:41 2021 # Report_file: c_0524_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # 9: usage_00027.pdb # 10: usage_00031.pdb # 11: usage_00033.pdb # 12: usage_00035.pdb # # Length: 122 # Identity: 11/122 ( 9.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/122 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/122 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NWTASKIFCSLQKAELAQIDTQEDMEFLKRYA-GT--DMHWIGLSRKQ-G-D-SWKWTNG 54 usage_00013.pdb 1 SWTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 56 usage_00014.pdb 1 SWTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 56 usage_00015.pdb 1 SWTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 56 usage_00016.pdb 1 -WTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 55 usage_00017.pdb 1 -WTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 55 usage_00018.pdb 1 -WTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 55 usage_00019.pdb 1 SWTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 56 usage_00027.pdb 1 SWQDSEKDCARMEAHLLVINTQEEQDFIFQNL-QEE-SAYFVGLSDPE-G-QRHWQWVDQ 56 usage_00031.pdb 1 -WEKSQEKCLSLDAKLLKINSTADLDFIQQAI-SYSSFPF-WGLSRRN-PSY-PWLWEDG 55 usage_00033.pdb 1 SWTKSQKNCSVMGADLVVINTREEQDFIIQNL-KRN-SSYFLGLSDPGGR-R-HWQWVDQ 56 usage_00035.pdb 1 TWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEKY-NSFWIGLRYTL-P-DMNWKWING 57 W s C A L I e F GLs W W usage_00001.pdb 55 TTFNGW-------FEIIG-------N-G-SFAFLS-------ADGVHSSRGFIDIKWICS 91 usage_00013.pdb 57 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-S-EW-GWNDIHCHVPQKSICK 104 usage_00014.pdb 57 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-E--W-GWNDIHCHVPQKSICK 103 usage_00015.pdb 57 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-E-EW-GWNDIHCHVPQKSICK 104 usage_00016.pdb 56 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-E-EW-GWNDIHCHVPQKSICK 103 usage_00017.pdb 56 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-S-EW-GWNDIHCHVPQKSICK 103 usage_00018.pdb 56 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-S-EW-GWNDIHCHVPQKSICK 103 usage_00019.pdb 57 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-SEEW-GWNDIHCHVPQKSICK 105 usage_00027.pdb 57 TPYNES------STFWHP-REPS-DPNE-RCVVLNFRKSPKRW-GWNDVNCLGPQRSVCE 106 usage_00031.pdb 56 SPLP-H------LFRVRGAVSQTYPS--GTCAYIQR------G-AVYAENCILAAFSICQ 99 usage_00033.pdb 57 TPYNEN------VTFWHS-GEPN-NL-DERCAIINFRS-E--W-GWNDIHCHVPQKSICK 103 usage_00035.pdb 58 STLNSDVLKITGDT-----------E-NDSCAAISG------D-KVTFESCNSDNRWICQ 98 n ca c iC usage_00001.pdb 92 KP 93 usage_00013.pdb 105 MK 106 usage_00014.pdb 104 MK 105 usage_00015.pdb 105 MK 106 usage_00016.pdb 104 MK 105 usage_00017.pdb 104 M- 104 usage_00018.pdb 104 MK 105 usage_00019.pdb 106 MK 107 usage_00027.pdb 107 MM 108 usage_00031.pdb 100 KK 101 usage_00033.pdb 104 MK 105 usage_00035.pdb 99 K- 99 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################