################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:48 2021 # Report_file: c_0083_5.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00132.pdb # 2: usage_00187.pdb # 3: usage_00188.pdb # 4: usage_00426.pdb # # Length: 268 # Identity: 20/268 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 191/268 ( 71.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 77/268 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 --DPKQLEQLFDVSL-KGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLK-NNNLINILQ 56 usage_00187.pdb 1 NG--KTLIPLIHLLSTSDNEDCKKSVQNLIAELLSSDK-YGDDTVKFFQEDPKQLEQLFD 57 usage_00188.pdb 1 ----KQLEQLFDVSL-KGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLK-NNNLINILQ 54 usage_00426.pdb 1 ----KQLEQLFDVSL-KGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLK-NNNLINILQ 54 KqLeqLfdvsl kgdfqtvlisgfnvvsLLvqng hnvklVekllk nnnLinilq usage_00132.pdb 57 N--IEQMDTCYVCIRLLQELAVIPEYR--DVIWLHE-KKFMPTLFKILQRAT-D------ 104 usage_00187.pdb 58 VSLKGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLKNNNLIN---ILQNI--------- 105 usage_00188.pdb 55 N--IEQMDTCYVCIRLLQELAVIPEYR--DVIWLHE-KKFMPTLFKILQRATDSQLATRI 109 usage_00426.pdb 55 N--IEQMDTCYVCIRLLQELAVIPEYR--DVIWLHE-KKFMPTLFKILQRATDSQLATRI 109 n ieqmdTcyvcirllqeLaVipeyr dviwlhe kkfmpt ILQra usage_00132.pdb 105 ------HLGIQLQYHSLLLIWLLT-------FN--PVFANELVQKYLSDFLDLLKLVKI- 148 usage_00187.pdb 106 ----EQMDTCYVCIRLLQELAVIPEYRDVIWLHEK---------KFMPTLFKILQRATDS 152 usage_00188.pdb 110 VATNSNHLGIQLQYHSLLLIWLLT-------FN--PVFANELVQKYLSDFLDLLKLVKI- 159 usage_00426.pdb 110 VATNSNHLGIQLQYHSLLLIWLLT-------FN--PVFANELVQKYLSDFLDLLKLVKI- 159 hlgiqlqyhsLlliwllt fn KylsdfldlLklvki usage_00132.pdb 149 --------------TIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGN-ALPTVQSL 193 usage_00187.pdb 153 QLATRIVATNSNHL--GIQLQYHSLLLIWLLTF-----NPVFANELVQKYLSDFLDLLKL 205 usage_00188.pdb 160 --------------TIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGN-ALPTVQSL 204 usage_00426.pdb 160 --------------TIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGN-ALPTVQSL 204 kekvsrlcisiIlqccs hkkvikqLlllgn alptvqsL usage_00132.pdb 194 SERKYSDEELRQDISNLKEILENEYQEL 221 usage_00187.pdb 206 VK-ITIKEKVSRLCISIILQCCS----- 227 usage_00188.pdb 205 SERKYSDEELRQDISNLKEILENEYQE- 231 usage_00426.pdb 205 SERKYSDEELRQDISNLKEILENEYQE- 231 se kysdEelrqdisnlkeilen #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################