################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:25 2021 # Report_file: c_0777_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00057.pdb # 2: usage_00334.pdb # 3: usage_00723.pdb # 4: usage_01088.pdb # 5: usage_01089.pdb # 6: usage_01090.pdb # 7: usage_01091.pdb # 8: usage_01094.pdb # 9: usage_01096.pdb # 10: usage_01097.pdb # 11: usage_01448.pdb # # Length: 97 # Identity: 24/ 97 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 97 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 97 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 GQLTPENSMKWDATEPNRGQFTFSGSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSS--- 57 usage_00334.pdb 1 GSITPENAMKWEAIQPNRGQFNWGPADQHAAAATSRGYELRCHTLVWHSQLPSWVANGN- 59 usage_00723.pdb 1 NLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHSQLPDWAKN--- 57 usage_01088.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01089.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01090.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01091.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01094.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01096.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01097.pdb 1 NSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 60 usage_01448.pdb 1 NLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHSQLPDWAKN--- 57 EN MK P F f D A gHTLVWH Q P W usage_00057.pdb 58 ---ITDKNTLISVLKNHITTVMTRYKGKIYAWDVLNE 91 usage_00334.pdb 60 ---W-NNQTLQAVMRDHINAVMGRYRGKCTHWDVV-- 90 usage_00723.pdb 58 ---L-NGSAFESAMVNHVTKVADHFEGKVASWDVVNE 90 usage_01088.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01089.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01090.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01091.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01094.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01096.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01097.pdb 61 GHFV-SRDVLLERMKCHISTVVRRYKGKIYCWDVI-- 94 usage_01448.pdb 58 ---L-NGSAFESAMVNHVTKVADHFEGKVASWDVVNE 90 m H V GK WDV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################