################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:00 2021 # Report_file: c_1203_6.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00028.pdb # 2: usage_00135.pdb # 3: usage_00351.pdb # 4: usage_00378.pdb # 5: usage_00410.pdb # 6: usage_00534.pdb # 7: usage_00553.pdb # 8: usage_00632.pdb # 9: usage_00637.pdb # 10: usage_00638.pdb # 11: usage_01379.pdb # 12: usage_01380.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 57 ( 10.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 57 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ----MEIKLIKGP----KGLGFSIAG-GVGNQ-HI-------P-GDNSIYVTK---- 35 usage_00135.pdb 1 --DTFEVELAKTD----GSLGISVTVLFDKGGVNT-------SVRHGGIYVKAIIP- 43 usage_00351.pdb 1 LVTEEEINLTRGP----SGLGFNIVG-GTDQQ-YV-------S-NDSGIYVSR---- 39 usage_00378.pdb 1 --EYEEITLERGN----SGLGFSIAG-GTDNP-HI-------G-DDPSIFITKIIPG 41 usage_00410.pdb 1 HMELFPVELEKDS----EGLGISIIGMGAG-A--D-------M--GLEKLGIFV--- 38 usage_00534.pdb 1 MFKYEEIVLERGN----SGLGFSIAG-GIDNP-HV-------P-DDPGIFITKIIPG 43 usage_00553.pdb 1 --EYEEITLERGN----SGLGFSIAG-GTDNP-HI-------G-DDPSIFITK---- 37 usage_00632.pdb 1 TAVVQRVEIHKLRQGENLILGFSIGG-GIDQD-PSQNPFSEDK-TDKGIYVTR---- 50 usage_00637.pdb 1 -GDIFEVELAKND----NSLGICVTG-GVNT--S--------V-RHGGIYVKAVI-- 38 usage_00638.pdb 1 ----MEIKLIKGP----KGLGFSIAG-GVGNQ-HI-------P-GDNSIYVTK---- 35 usage_01379.pdb 1 EFEFEEITLERGN----SGLGFSIAG-GTDNP-HI-------G-DDPGIFITK---- 39 usage_01380.pdb 1 EFEFEEITLERGN----SGLGFSIAG-GTDNP-HI-------G-DDPGIFITKIIPG 43 l LG g g i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################