################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:56 2021 # Report_file: c_0582_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00038.pdb # 2: usage_00082.pdb # 3: usage_00083.pdb # 4: usage_00084.pdb # 5: usage_00277.pdb # 6: usage_00280.pdb # 7: usage_00281.pdb # 8: usage_00282.pdb # 9: usage_00283.pdb # 10: usage_00299.pdb # 11: usage_00327.pdb # 12: usage_00329.pdb # # Length: 84 # Identity: 9/ 84 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 84 ( 36.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 84 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 ANLFIYHLPQ-----EF---GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 52 usage_00082.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 usage_00083.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 usage_00084.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 usage_00277.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 usage_00280.pdb 1 -NLIVNYLPQ-----N----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 50 usage_00281.pdb 1 -NLIVNYLPQ-----N----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 50 usage_00282.pdb 1 -NLIVNYLPQ-----N----TQDELRSLFSSIGEVESAKLIRDK--GHSLGYGFVNYVTA 48 usage_00283.pdb 1 -NLIVNYLPQ-----N----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 50 usage_00299.pdb 1 -VLVSIKSS-LPENNFFDDALIDELLQQFASFGEVILIRFV--------EDKMWVTFLEG 50 usage_00327.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 usage_00329.pdb 1 -NLIVNYLPQ-----NM---TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 51 nL lp deL F s GeV sak gfV y usage_00038.pdb 53 VSAQAAIQSMNGFQIGMKRLKVQL 76 usage_00082.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 usage_00083.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 usage_00084.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 usage_00277.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 usage_00280.pdb 51 KDAERAINTLNGLRLQSKTIKVSY 74 usage_00281.pdb 51 KDAERAINTLNGLRLQSKTIKVSY 74 usage_00282.pdb 49 KDAERAINTLNGLRLQSKTIKVSY 72 usage_00283.pdb 51 KDAERAINTLNGLRLQSKTIKVSY 74 usage_00299.pdb 51 SSALNVL-SLNGKELLNRTITIAL 73 usage_00327.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 usage_00329.pdb 52 KDAERAINTLNGLRLQSKTIKVSY 75 A ai lNG l ktikv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################