################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:05 2021 # Report_file: c_1408_17.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00313.pdb # 2: usage_00495.pdb # 3: usage_01030.pdb # # Length: 148 # Identity: 119/148 ( 80.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/148 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/148 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00313.pdb 1 -----------YNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQT 49 usage_00495.pdb 1 NIEAVGKKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQT 60 usage_01030.pdb 1 ---------HEYNTQFQEKSREYDRLYEDYTRTSQEIQMKRTAIEAFNETIKIFEEQCQT 51 YNTQFQEKSREYDRLYEeYTRTSQEIQMKRTAIEAFNETIKIFEEQCQT usage_00313.pdb 50 QERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREID 109 usage_00495.pdb 61 QERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREID 120 usage_01030.pdb 52 QERYSKEYIEKFKREGNETEIQRIMHNYEKLKSRISEIVDSRRRLEEDLKKQAAEYREID 111 QERYSKEYIEKFKREGNEkEIQRIMHNYdKLKSRISEIiDSRRRLEEDLKKQAAEYREID usage_00313.pdb 110 KRMNSIKPDLIQLRKTRDQY-------- 129 usage_00495.pdb 121 KRMNSIKPDLIQLRKTRDQYLMWLTQKG 148 usage_01030.pdb 112 KRMNSIKPDLIQLR-------------- 125 KRMNSIKPDLIQLR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################