################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:17 2021 # Report_file: c_1027_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00012.pdb # 2: usage_00086.pdb # 3: usage_00109.pdb # 4: usage_00110.pdb # 5: usage_00111.pdb # 6: usage_00220.pdb # 7: usage_00254.pdb # 8: usage_00447.pdb # 9: usage_00508.pdb # 10: usage_00509.pdb # # Length: 64 # Identity: 33/ 64 ( 51.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 64 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 64 ( 42.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG 59 usage_00086.pdb 1 A--VLCHLGALTNRPVVEALTKRKITAYA-EL-PRISRAQS-DILSSQSNLAGYRAVIDG 55 usage_00109.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDG 59 usage_00110.pdb 1 --VLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMD----------------- 41 usage_00111.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILASQSNLAGYRAVIDG 59 usage_00220.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG 59 usage_00254.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMD----------------- 42 usage_00447.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMN----------------- 42 usage_00508.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG 59 usage_00509.pdb 1 -AVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDG 59 lmCHLGALTNRPVVEALTKRKITAYA EL PrISRAQS d usage_00012.pdb 60 AY-- 61 usage_00086.pdb 56 AYE- 58 usage_00109.pdb 60 AY-- 61 usage_00110.pdb ---- usage_00111.pdb 60 AYE- 62 usage_00220.pdb 60 AY-- 61 usage_00254.pdb ---- usage_00447.pdb ---- usage_00508.pdb 60 AYEF 63 usage_00509.pdb 60 AYEF 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################