################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:09 2021 # Report_file: c_0054_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00115.pdb # 2: usage_00116.pdb # 3: usage_00147.pdb # 4: usage_00182.pdb # 5: usage_00183.pdb # 6: usage_00184.pdb # 7: usage_00187.pdb # # Length: 246 # Identity: 105/246 ( 42.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 220/246 ( 89.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/246 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 usage_00116.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 usage_00147.pdb 1 PELREELAAFLKKYDHLEVS-PENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL 59 usage_00182.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 usage_00183.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 usage_00184.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 usage_00187.pdb 1 TPLRETLMKWLGKRYGISQDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL 58 tpLREtLmkwLgKrygisqd dImITsGsqqALDLiGRVflnPGDiVvvEaPtYlaaL usage_00115.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 usage_00116.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 usage_00147.pdb 60 LAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMER 119 usage_00182.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 usage_00183.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 usage_00184.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 usage_00187.pdb 59 QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDR 118 qAFnfyepqyiqiPlDdeGMkVeiLEEKlKELKsqGkKVKvvYTvPTfQNPaGVTMnedR usage_00115.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 usage_00116.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 usage_00147.pdb 120 RKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIG 179 usage_00182.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 usage_00183.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 usage_00184.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 usage_00187.pdb 119 RKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIG 178 RKyLLElASeYDfivvEDdpYgelRYsGnpekkiKALDNEGRVIylGTfSKiLapGFRIG usage_00115.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKH----------------- 221 usage_00116.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 238 usage_00147.pdb 180 WIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYH----LEG--------- 226 usage_00182.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 238 usage_00183.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 238 usage_00184.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 238 usage_00187.pdb 179 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 238 WmvgdpgIirKmeiaKQstDlCtnvfgQvvAwrYvdgGYlEKh usage_00115.pdb ------ usage_00116.pdb 239 ALEEFM 244 usage_00147.pdb ------ usage_00182.pdb 239 ALEEFM 244 usage_00183.pdb 239 ALEE-- 242 usage_00184.pdb 239 ALEE-- 242 usage_00187.pdb 239 ALEE-- 242 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################