################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:34 2021 # Report_file: c_0888_29.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00323.pdb # 2: usage_00381.pdb # 3: usage_00382.pdb # 4: usage_00392.pdb # 5: usage_00394.pdb # 6: usage_00398.pdb # 7: usage_00399.pdb # 8: usage_00703.pdb # 9: usage_00704.pdb # 10: usage_00724.pdb # 11: usage_00881.pdb # # Length: 73 # Identity: 65/ 73 ( 89.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 73 ( 89.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 73 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00323.pdb 1 LTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 60 usage_00381.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 usage_00382.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 usage_00392.pdb 1 -TEP-VVALLKYWPKTHSPKE-VFLNELEEILDVIEPSEFVKI-EPLFRQLAKCVSSPHF 56 usage_00394.pdb 1 -TEP-VVALLKYWPKTHSPKE-VFLNELEEILDVIEPSEFVKI-EPLFRQLAKCVSSPHF 56 usage_00398.pdb 1 -TEP-VVALLKYWPKTHSPKE-VFLNELEEILDVIEPSEFVKI-EPLFRQLAKCVSSPHF 56 usage_00399.pdb 1 -TEP-VVALLKYWPKTHSPKE-VFLNELEEILDVIEPSEFVKI-EPLFRQLAKCVSSPHF 56 usage_00703.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 usage_00704.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 usage_00724.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 usage_00881.pdb 1 -TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 59 TEP V ALLKYWPKTHSPKE FLNELEEILDVIEPSEFVKI EPLFRQLAKCVSSPHF usage_00323.pdb 61 QVAERALYYWNNE 73 usage_00381.pdb 60 QVAERALYYWNNE 72 usage_00382.pdb 60 QVAERALYYWNNE 72 usage_00392.pdb 57 QVAERALYYWNN- 68 usage_00394.pdb 57 QVAERALYYWNN- 68 usage_00398.pdb 57 QVAERALYYWNN- 68 usage_00399.pdb 57 QVAERALYYWN-- 67 usage_00703.pdb 60 QVAERALYYWNN- 71 usage_00704.pdb 60 QVAERALYYWNN- 71 usage_00724.pdb 60 QVAERALYYWNN- 71 usage_00881.pdb 60 QVAERALYYWNN- 71 QVAERALYYWN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################