################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:00 2021 # Report_file: c_0782_3.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00004.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00063.pdb # 5: usage_00064.pdb # 6: usage_00065.pdb # 7: usage_00066.pdb # 8: usage_00067.pdb # 9: usage_00068.pdb # 10: usage_00069.pdb # 11: usage_00135.pdb # 12: usage_00136.pdb # 13: usage_00201.pdb # 14: usage_00202.pdb # 15: usage_00203.pdb # 16: usage_00296.pdb # # Length: 83 # Identity: 15/ 83 ( 18.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 83 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 83 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -----G-KLNMDEFAMGSSNQSSHYGAVKNPWS-L-D-RVPGGSSGGSAAAVAARLLPAA 51 usage_00041.pdb 1 ------AK-TNHEIALGITGENPWTGPVRNAVD-P-S-RQAGGSSGGSAVAVALGIGLAS 50 usage_00042.pdb 1 ------AK-TNHEIALGITGENPWTGPVRNAVD-P-S-RQAGGSSGGSAVAVALGIGLAS 50 usage_00063.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00064.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00065.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00066.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00067.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00068.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00069.pdb 1 -----G-KTNLDEFAMGSSTEYSAFFPTKNPWD-L-E-RVPGGSSGGSAASVAVLSAPVS 51 usage_00135.pdb 1 -----G-KTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFA 54 usage_00136.pdb 1 -----G-KTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFA 54 usage_00201.pdb 1 GATVAG-KAVCEDLCFSGSSFTPASGPVRNPWD-R-Q-REAGGSSGGSAALVANGDVDFA 56 usage_00202.pdb 1 -----G-KTNTPEMGNQVTTEPEAWGATRNPWN-L-G-RSVGGSSGGSGAAVAAALSPVA 51 usage_00203.pdb 1 -----G-KTNTPEMGNQVTTEPEAWGATRNPWN-L-G-RSVGGSSGGSGAAVAAALSPVA 51 usage_00296.pdb 1 -----G-QTNSPVYGFRGTTDNTFFGPTRNPFN-L-D-FNAGGSSGGAAALVADGIVPVA 51 k N GGSS G VA usage_00004.pdb 52 TGTDTGGSIRQPAALTNLTGIKP 74 usage_00041.pdb 51 LGTDTGGSIRIPAGFNGVVGFKP 73 usage_00042.pdb 51 LGTDTGGSIRIPAGFNGVVGFKP 73 usage_00063.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00064.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00065.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00066.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00067.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00068.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00069.pdb 52 LGSDTGGSIRQPASFCGVIGIKP 74 usage_00135.pdb 55 LGTDTGGSVRLPACYGSVLGFKP 77 usage_00136.pdb 55 LGTDTGGSVRLPACYGSVLGFKP 77 usage_00201.pdb 57 IGGDQGGAIRIPAAFCGVVGHK- 78 usage_00202.pdb 52 HGNDAAGSVRIPASVCGVVGLKP 74 usage_00203.pdb 52 HGNDAAGAVRIPASVCGVVGLKP 74 usage_00296.pdb 52 GGTDGGGAIRIPAAWTNTYGFQP 74 G D G R PA G k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################