################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:51:01 2021 # Report_file: c_1103_12.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00013.pdb # 9: usage_00015.pdb # 10: usage_00085.pdb # 11: usage_00086.pdb # 12: usage_00087.pdb # 13: usage_00088.pdb # 14: usage_00115.pdb # 15: usage_00116.pdb # 16: usage_00124.pdb # 17: usage_00125.pdb # 18: usage_00144.pdb # 19: usage_00145.pdb # 20: usage_00147.pdb # 21: usage_00148.pdb # 22: usage_00149.pdb # 23: usage_00158.pdb # 24: usage_00205.pdb # 25: usage_00206.pdb # 26: usage_00207.pdb # 27: usage_00292.pdb # 28: usage_00312.pdb # 29: usage_00313.pdb # 30: usage_00317.pdb # 31: usage_00327.pdb # 32: usage_00328.pdb # 33: usage_00337.pdb # 34: usage_00354.pdb # 35: usage_00355.pdb # # Length: 105 # Identity: 58/105 ( 55.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/105 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/105 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00006.pdb 1 TNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYY 60 usage_00008.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00009.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00010.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00011.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00012.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00013.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00015.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00085.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00086.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00087.pdb 1 ---------VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 51 usage_00088.pdb 1 ---------VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 51 usage_00115.pdb 1 ----------VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYY 50 usage_00116.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00124.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00125.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00144.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00145.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00147.pdb 1 TNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYY 60 usage_00148.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00149.pdb 1 ----------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 50 usage_00158.pdb 1 ----------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 50 usage_00205.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00206.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00207.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00292.pdb 1 TNQLQYLLRVVLKTLWKHKFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00312.pdb 1 ----------VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYY 50 usage_00313.pdb 1 TNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYY 60 usage_00317.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00327.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00328.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00337.pdb 1 -NQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYY 59 usage_00354.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 usage_00355.pdb 1 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY 60 V K LWKH F WPF PVDA KL LPDY IIK PMD TIKKRLEN YY usage_00005.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00006.pdb 61 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 105 usage_00008.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00009.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00010.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00011.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00012.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00013.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00015.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00085.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00086.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00087.pdb 52 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 96 usage_00088.pdb 52 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKIN-- 94 usage_00115.pdb 51 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 95 usage_00116.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKIN-- 103 usage_00124.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00125.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00144.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00145.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00147.pdb 61 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA------------ 93 usage_00148.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00149.pdb 51 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 95 usage_00158.pdb 51 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 95 usage_00205.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00206.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00207.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00292.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00312.pdb 51 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 95 usage_00313.pdb 61 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 105 usage_00317.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00327.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00328.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK---- 101 usage_00337.pdb 60 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 104 usage_00354.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 usage_00355.pdb 61 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 105 A EC DFNTMF NCY YNKp DDIVlMA A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################