################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:10 2021 # Report_file: c_1242_147.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00116.pdb # 2: usage_00169.pdb # 3: usage_00405.pdb # 4: usage_00687.pdb # 5: usage_01352.pdb # 6: usage_01354.pdb # 7: usage_01983.pdb # 8: usage_01984.pdb # 9: usage_02156.pdb # 10: usage_02157.pdb # 11: usage_02284.pdb # # Length: 36 # Identity: 8/ 36 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 36 ( 47.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 36 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 NVGFIGWRGMVGSVLMDRMSQENDFE-NLNPVFFT- 34 usage_00169.pdb 1 NVGFIGWRGMVGSVLMQRMVEERDFD-AIRPVFFS- 34 usage_00405.pdb 1 NVGFIGWRGMVGSVLMDRMSQENDFE-NLNPVFFT- 34 usage_00687.pdb 1 RVFIAGHRGMVGSAIRRQLEQRG---DVELVLR-T- 31 usage_01352.pdb 1 RVGLVGWRGMVGSVLMQRMVEERDFD-LIEPVFFS- 34 usage_01354.pdb 1 RVGLVGWRGMVGSVLMQRMVEERDFD-LIEPVFFS- 34 usage_01983.pdb 1 RVGLVGWRGMVGSVLMQRMVEERDFD-LIEPVFFS- 34 usage_01984.pdb 1 RVGLVGWRGMVGSVLMQRMVEERDFD-LIEPVFFS- 34 usage_02156.pdb 1 KVGFIGWRGMVGSVLMSRMIESKDFD-CILPTFFST 35 usage_02157.pdb 1 KVGFIGWRGMVGSVLMSRMIESKDFD-CILPTFFST 35 usage_02284.pdb 1 NVGFIGWRGMVGSVLMQRMVEERDFD-AIRPVFFS- 34 Vg GwRGMVGSvlm rm p f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################