################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:03 2021 # Report_file: c_1387_22.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00979.pdb # 2: usage_00980.pdb # 3: usage_00981.pdb # 4: usage_01672.pdb # 5: usage_01673.pdb # 6: usage_01674.pdb # # Length: 73 # Identity: 47/ 73 ( 64.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 73 ( 64.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 73 ( 35.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00979.pdb 1 HPFTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVVGTRV-VGGTLEPAGREPRR 59 usage_00980.pdb 1 -PFTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVV------------------R 41 usage_00981.pdb 1 HPFTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVV-------------R-EPRR 46 usage_01672.pdb 1 --FTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVVGTR-----TLEPAGREPRR 53 usage_01673.pdb 1 --FTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVVGTR-VV-------GREPRR 50 usage_01674.pdb 1 HPFTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVVGTR-V-------AGREPRR 52 FTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCSVV R usage_00979.pdb 60 LAE-WYILIRG-- 69 usage_00980.pdb 42 LAEMWYILIRG-- 52 usage_00981.pdb 47 LAEMWYILIRG-- 57 usage_01672.pdb 54 LAEMWYILIRGMV 66 usage_01673.pdb 51 LAEMWYIL----- 58 usage_01674.pdb 53 LAEMWYILIRG-- 63 LAE WYIL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################