################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:58 2021 # Report_file: c_1434_249.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01204.pdb # 2: usage_01699.pdb # 3: usage_03334.pdb # 4: usage_03335.pdb # # Length: 79 # Identity: 8/ 79 ( 10.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 79 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 79 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01204.pdb 1 -----------------LDEARRGEQLNTDIINLFLETKDIQEQLDAYKNS--EEP-DAA 40 usage_01699.pdb 1 SRHKVQIDMERQVQIAKDLLAQK----------KFLEAA-KRCQQTLDSLPKDGLLPDPE 49 usage_03334.pdb 1 --------MERQVQIAKDLLAQK----------KFLEAA-KRCQQTLDSLPKDGLLPDPE 41 usage_03335.pdb 1 --------MERQVQIAKDLLAQK----------KFLEAA-KRCQQTLDSLPKDGLLPDPE 41 dllAqk kFLEaa krcQqtldslp gll Dpe usage_01204.pdb 41 SFEYICNALRQLALEAKGE 59 usage_01699.pdb 50 LFTIFAQAVYNMEVQNS-- 66 usage_03334.pdb 42 LFTIFAQAVYNMEV----- 55 usage_03335.pdb 42 LFTIFAQAVYNMEVQNSGN 60 lFtifaqAvynmev #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################