################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:38 2021 # Report_file: c_0542_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00046.pdb # 2: usage_00060.pdb # 3: usage_00061.pdb # 4: usage_00229.pdb # 5: usage_00230.pdb # 6: usage_00242.pdb # 7: usage_00243.pdb # 8: usage_00257.pdb # # Length: 158 # Identity: 42/158 ( 26.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/158 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/158 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 NKLIDEVNNELSVAIN--KSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYE-L 57 usage_00060.pdb 1 --KLKKIDQTIHAFYCEKAVIS-EKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTES 57 usage_00061.pdb 1 -DKLKKIDQTIHAFYCEKAVIS-EKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTES 58 usage_00229.pdb 1 --KLKKIDQTIHAFYCEKAVIS-EKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTES 57 usage_00230.pdb 1 --KLKKIDQTIHAFYCEKAVIS-EKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTES 57 usage_00242.pdb 1 -NLKELFIHHLEKNLPKVESFH-PFFNEALAL-LKAGGKHFRAQLLLSVVQSNKPELLNQ 57 usage_00243.pdb 1 --LKELFIHHLEKNLPKVESFH-PFFNEALAL-LKAGGKHFRAQLLLSVVQSNKPELLNQ 56 usage_00257.pdb 1 ---LPLVEKVMVDFIAEY-TEN-ERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQ 55 Ea AGGK R L L usage_00046.pdb 58 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 117 usage_00060.pdb 58 HFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGML 117 usage_00061.pdb 59 HFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGML 118 usage_00229.pdb 58 HFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGML 117 usage_00230.pdb 58 HFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGML 117 usage_00242.pdb 58 ALDVALALEFIHTYSLIHDDLPA-DNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVL 116 usage_00243.pdb 57 ALDVALALEFIHTYSLIHDDLPA-DNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVL 115 usage_00257.pdb 56 DYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLL 115 A aLE IHT SLIHDDLPA Dn D RRG T HK E TAIL GD L AF l usage_00046.pdb 118 SSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSE 155 usage_00060.pdb 118 AETDF-PTDVTVDLVRSLSSAS---------------- 138 usage_00061.pdb 119 AETDF-PTDVTVDLVRSLSSAS---------------- 139 usage_00229.pdb 118 AETDF-PTDVTVDLVRSLSSAS---------------- 138 usage_00230.pdb 118 AETDF-PTDVTVDLVRSLSSAS---------------- 138 usage_00242.pdb 117 SHAHL-KDEIKIKLIKTLAFNAG--------------- 138 usage_00243.pdb 116 SHAHL-KDEIKIKLIKTLAFNAG--------------- 137 usage_00257.pdb 116 SLSQL-GLSEKVLLMQQLAKAA---------------- 136 l L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################