################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:44 2021 # Report_file: c_1484_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00847.pdb # 2: usage_00877.pdb # 3: usage_01748.pdb # 4: usage_01961.pdb # 5: usage_02230.pdb # 6: usage_03630.pdb # 7: usage_04386.pdb # # Length: 64 # Identity: 1/ 64 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 64 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00847.pdb 1 -----IQGALVGIAMVLSAVFVPMAFFG-GSTGAIYRQFSITIVSAMALSVLVALILTPA 54 usage_00877.pdb 1 -------GALVGIAMVLSAVFVPMAFFG-GSTGAIYRQFSITIVSAMALSVLVALILTPA 52 usage_01748.pdb 1 -----IQGALVGIAMVLSAVFVPMAFFG-GSTGAIYRQFSITIVSAMALSVLVALILTPA 54 usage_01961.pdb 1 -----ISGAVIGITAVLISVFVPLAMFS-GAAGNIYKQFALTMASSIAFSAFLAL----- 49 usage_02230.pdb 1 GVLAGIVVGDLVLTVLIALAVYFLGRL-GTAEVLGIISIVLVATVLKTIVLIPFLE---- 55 usage_03630.pdb 1 ---------LVGIAMVLSAVFVPMAFFG-GSTGAIYRQFSITIVSAMALSVLVALILTPA 50 usage_04386.pdb 1 -----IQGALVGIAMVLSAVFVPMAFFG-GSTGAIYRQFSITIVSAMALSVLVALILTPA 54 gi vl vfvp a f g g iy qf t s a s aL usage_00847.pdb 55 LCAT 58 usage_00877.pdb 53 LCAT 56 usage_01748.pdb 55 LCA- 57 usage_01961.pdb ---- usage_02230.pdb ---- usage_03630.pdb 51 LCAT 54 usage_04386.pdb 55 LCAT 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################