################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:52 2021 # Report_file: c_0966_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00022.pdb # 2: usage_00023.pdb # 3: usage_00137.pdb # 4: usage_00213.pdb # 5: usage_00529.pdb # 6: usage_00610.pdb # 7: usage_00900.pdb # # Length: 82 # Identity: 28/ 82 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 82 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 82 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 VEGLMTTVHAITATQKTVDGPSGK-LWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLT 59 usage_00023.pdb 1 VEGLMTTVHAITATQKTVDGPSGK-LWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLT 59 usage_00137.pdb 1 ETGLMTTIHAYTNDQVLTDVYH-E-DLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLD 58 usage_00213.pdb 1 --GTMTTTHSYTGDQRLLDASH-R-DLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLN 56 usage_00529.pdb 1 VEGLMTTVHSYTATQKTVDGPSKK-DWRGGRGAHQNIIPSSTGAAKAVGKVIPELKGKLT 59 usage_00610.pdb 1 VEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAA-AIGKVIPEIDGKLD 59 usage_00900.pdb 1 IEGLMTTVHAITATQKTVDGPSSK-DWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLT 59 GlMTT H T Q D R R A niiP sTGAA Avg V P l GKL usage_00022.pdb 60 GMAFRVPTANVSVVDLTCRLEK 81 usage_00023.pdb 60 GMAFRVPTANVSVVDLTCRLEK 81 usage_00137.pdb 59 GYAIRVPTINVSIVDLSFIAKR 80 usage_00213.pdb 57 GIALRVPTPNVSVVDLVVQVS- 77 usage_00529.pdb 60 GMAFRVPTPNVSVVDLTCRLAK 81 usage_00610.pdb 60 GGAQRVPVATGSLTELTV---- 77 usage_00900.pdb 60 GMSFRVPTVDVSVVDLTVRIEK 81 G a RVPt vS vdL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################