################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:31:34 2021 # Report_file: c_0092_2.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00040.pdb # 8: usage_00041.pdb # 9: usage_00042.pdb # 10: usage_00043.pdb # 11: usage_00051.pdb # 12: usage_00053.pdb # 13: usage_00062.pdb # 14: usage_00064.pdb # 15: usage_00077.pdb # 16: usage_00078.pdb # # Length: 197 # Identity: 69/197 ( 35.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/197 ( 38.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/197 ( 5.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 EDMRVKVHMEGNVNGHAFVIEGEGKGKPYEGTQTANLTVKEGAPLPFSYDILTTAVNRVF 60 usage_00030.pdb 1 EDMRVKVHMEGNVNGHAFVIEGEGKGKPYEGTQTANLTVKEGAPLPFSYDILTTAVNRVF 60 usage_00031.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 58 usage_00037.pdb 1 --MTMHFRMEGCVDGHKFVIEGNGNGNPFKGKQFINLCVIEGGPLPFSEDILSAAFNRLF 58 usage_00038.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00039.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00040.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00041.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00042.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00043.pdb 1 --MTMKYHMEGCVNGHKFVITGEGIGYPFKGKQTINLCVIEGGPLPFSEDILSAGFDRIF 58 usage_00051.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 58 usage_00053.pdb 1 PEMKIKLCMRGTVNGHNFVIEGEGKGNPYEGTQILDLNVTEGAPLPFAYDILTTVFNRAF 60 usage_00062.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00064.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 usage_00077.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTMAFNRVF 58 usage_00078.pdb 1 --MKINLRMEGNVNGHHFVIDGDGTGKPFEGKQSMDLEVKEGGPLPFAFDILTTAFNRVF 58 M MeG VnGH F I G G G P G Q L V EG PLPF DIL nR F usage_00029.pdb 61 TKYPEDIPDYFKQSFPEGYSWERTMTFEDKGICTIRSDISLEG--DCFFQNVRFKGTNFP 118 usage_00030.pdb 61 TKYPEDIPDYFKQSFPEGYSWERTMTFEDKGICTIRSDISLEG--DCFFQNVRFKGTNFP 118 usage_00031.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00037.pdb 59 TEYPEGIVDYFKNSCPAGYTWHRSFRFEDGAVCICSADITVNVRENCIYHESTFYGVNFP 118 usage_00038.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00039.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00040.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00041.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00042.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00043.pdb 59 TEYPQDIVDYFKNSCPAGYTWGRSFLFEDGAVCICNVDITVSVKENCIYHKSIFNGMNFP 118 usage_00051.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00053.pdb 61 TKYPADIQDYFKQTFPEGYHWERSMTYEDQGICTATSNISMRG--DCFFYDIRFDGTNFP 118 usage_00062.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEG--DTFYNKVRFHGVNFP 116 usage_00064.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEG--DTFYNKVRFHGVNFP 116 usage_00077.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMIYEDGGICNATNDITLDG--DCYIYEIRFDGVNFP 116 usage_00078.pdb 59 AEYPDHIQDYFKQSFPKGYSWERSLTFEDGGICIARNDITMEG--DTFYNKVRFHGVNFP 116 YP I DYFK s P GY W R ED C dI F G NFP usage_00029.pdb 119 PNGPVMQKKTLKWEPSTEKLHVRD--GLLVGNINMALLLEGGGHYLCDFKTTYKAKKVV- 175 usage_00030.pdb 119 PNGPVMQKKTLKWEPSTEKLHVRD--GLLVGNINMALLLEGGGHYLCDFKTTYKAKKVV- 175 usage_00031.pdb 117 ANGPVMQKRTVKWEPSTEKLYVRD--GVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00037.pdb 119 ADGPVMKKMTTNWEPSCEKIIPINSQKILKGDVSMYLLLKDGGRYRCQFDTIYKAKTEPK 178 usage_00038.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00039.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00040.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00041.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00042.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00043.pdb 119 ADGPVMKKMTTNWEASCEKIMPVPKQGILKGDVSMYLLLKDGGRYRCQFDTVYKAKSVPS 178 usage_00051.pdb 117 ANGPVMQKRTVKWEPSTEKLYVRD--GVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00053.pdb 119 PNGPVMQKKTLKWEPSTEKMYVED--GVLKGDVNMRLLLEGGGHYRCDFKTTYKAKKEV- 175 usage_00062.pdb 117 ANGPVMQKKTLKWEPSTEKMYVRD--GVLTGDITAALLLEGNAHYRCDSRTTYKAKEKG- 173 usage_00064.pdb 117 ANGPVMQKKTLKWEPSTEKMYVRD--GVLTGDITMALLLEGNAHYRCDSRTTYKAKEKG- 173 usage_00077.pdb 117 ANGPVMQKRTVKWELSTEKLYVRD--GVLKSDGNYALSLEGGGHYRCDFKTTYKAKKVV- 173 usage_00078.pdb 117 ANGPVMQKKTLKWEPSTEKMYVRD--GVLTGDITMALLLEGNAHYRCDSRTTYKAKEKG- 173 GPVM K T WE S EK g L L L Y C T YKAK usage_00029.pdb 176 QLPDAHFVDHRIEI--- 189 usage_00030.pdb 176 QLPDAHFVDHRIEI--- 189 usage_00031.pdb 174 QLPDYHFVDHHIEI--- 187 usage_00037.pdb 179 EMPDWHFIQHKLNR-ED 194 usage_00038.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00039.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00040.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00041.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00042.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00043.pdb 179 KMPEWHFIQHKLLR-ED 194 usage_00051.pdb 174 QLPDYHFVDHHIEI--- 187 usage_00053.pdb 176 RLPDAHKIDHRIEI--- 189 usage_00062.pdb 174 VKLPGYHLVDHCIEI-- 188 usage_00064.pdb 174 VKLPGYHLVDHCIEI-- 188 usage_00077.pdb 174 QLPDYHSVDHHIEI--- 187 usage_00078.pdb 174 VKLPGYHLVDHCIEI-- 188 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################