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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:52:58 2021
# Report_file: c_0260_13.html
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#====================================
# Aligned_structures: 8
#   1: usage_00047.pdb
#   2: usage_00048.pdb
#   3: usage_00049.pdb
#   4: usage_00050.pdb
#   5: usage_00051.pdb
#   6: usage_00052.pdb
#   7: usage_00053.pdb
#   8: usage_00054.pdb
#
# Length:        124
# Identity:       94/124 ( 75.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    107/124 ( 86.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           17/124 ( 13.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00047.pdb         1  -QLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI   59
usage_00048.pdb         1  GQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI   60
usage_00049.pdb         1  -QLTKQHVRALAISALAPKPHETLWDI----GSIAIEWLRSTPQTTAVCFEISEERRERI   55
usage_00050.pdb         1  -QLTKQHVRALAISALAPKPHETLWDI---SGSIAIEWLRS--QTTAVCFEISEERRERI   54
usage_00051.pdb         1  GQLTKQHVRALAISALAPKPHETLWDI---GGSIAIEWLRSTPQTTAVCFEISEERRERI   57
usage_00052.pdb         1  --LTKQHVRALAISALAPKPHETLWDI---GGSIAIEWLRSTPQTTAVCFEISEERRERI   55
usage_00053.pdb         1  -QLTKQHVRALAISALAPK--ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERI   57
usage_00054.pdb         1  GQLTKQHVRALAISALAPK--ETLWDIG--GGSIAIEWLRSTPQTTAVCFEISEERRERI   56
                             LTKQHVRALAISALAPK  ETLWDI    GSIAIEWLRS  QTTAVCFEISEERRERI

usage_00047.pdb        60  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGLTAPGVFAAAWKRLPV-GGRLVA  118
usage_00048.pdb        61  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG--LTAPGVFAAAWKRLPVGGRLVA  118
usage_00049.pdb        56  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA  115
usage_00050.pdb        55  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA  114
usage_00051.pdb        58  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA  117
usage_00052.pdb        56  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI---LTAPGVFAAAWKRLPVGGRLVA  112
usage_00053.pdb        58  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA  117
usage_00054.pdb        57  LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVA  116
                           LSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI   ltapgvfAAawkrlp GGRLVA

usage_00047.pdb       119  NAV-  121
usage_00048.pdb       119  NAVT  122
usage_00049.pdb       116  NAV-  118
usage_00050.pdb       115  NAVT  118
usage_00051.pdb       118  N---  118
usage_00052.pdb       113  N---  113
usage_00053.pdb       118  NAV-  120
usage_00054.pdb       117  NAV-  119
                           N   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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