################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:16 2021 # Report_file: c_0548_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00023.pdb # 4: usage_00024.pdb # 5: usage_00025.pdb # 6: usage_00026.pdb # 7: usage_00027.pdb # 8: usage_00028.pdb # 9: usage_00040.pdb # 10: usage_00041.pdb # # Length: 110 # Identity: 65/110 ( 59.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/110 ( 60.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/110 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -QVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFES 59 usage_00002.pdb 1 --VRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFES 58 usage_00023.pdb 1 DQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 60 usage_00024.pdb 1 DQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 60 usage_00025.pdb 1 -QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 59 usage_00026.pdb 1 --KLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 58 usage_00027.pdb 1 --KLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 58 usage_00028.pdb 1 -QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 59 usage_00040.pdb 1 -QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 59 usage_00041.pdb 1 DQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFET 60 FE WR TGYPL DANM EL TGFMSNRGRQ V SFL G DWR GAEWFE usage_00001.pdb 60 CLIDYDVCSNWGNWNYTAGIGNDARDFRYFNIPKQSQQYDPQGTYLRHWL 109 usage_00002.pdb 59 CLIDYDVCSNWGNWNYTAGIGNDARDFRYFNIPKQSQQYDPQGTYLRHWL 108 usage_00023.pdb 61 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWL 110 usage_00024.pdb 61 CLLDYDPCSNYGNWTYGAGVND-P---RYFSIPKQAQNYDPEGEYVAFWL 106 usage_00025.pdb 60 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWL 109 usage_00026.pdb 59 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWL 108 usage_00027.pdb 59 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWL 108 usage_00028.pdb 60 CLLDYDPCSNYGNWTYGAGVGNDP---RYFSIPKQAQNYDPEGEYVAFWL 106 usage_00040.pdb 60 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEG------- 102 usage_00041.pdb 61 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWL 110 CL DYD CSN GNW Y AG gn RYF IPKQ Q YDP G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################