################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:34:50 2021 # Report_file: c_0683_8.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00006.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00040.pdb # 6: usage_00051.pdb # 7: usage_00056.pdb # 8: usage_00065.pdb # 9: usage_00073.pdb # 10: usage_00074.pdb # 11: usage_00076.pdb # 12: usage_00086.pdb # 13: usage_00087.pdb # 14: usage_00102.pdb # 15: usage_00105.pdb # 16: usage_00109.pdb # # Length: 88 # Identity: 20/ 88 ( 22.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 88 ( 56.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 88 ( 43.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00029.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00030.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00031.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00040.pdb 1 LTVTIASSLNTRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVS-----KDLIAVYYSFGG 55 usage_00051.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00056.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00065.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00073.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00074.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00076.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00086.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00087.pdb 1 ----------------------------EYVMYGKVYRIEGDETSTEAATRLSAYVSYGG 32 usage_00102.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00105.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 usage_00109.pdb 1 ----------------------------DYVMYGTAYKFEEVS-----KDLIAVYYSFGG 27 dYVMYGtaYkfEevs kdliavYySfGG usage_00006.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00029.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00030.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLI-- 51 usage_00031.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLI-- 51 usage_00040.pdb 56 LLMRLEGN--YRNLNNLKQENAYLLIRR 81 usage_00051.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00056.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00065.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00073.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00074.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00076.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00086.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00087.pdb 33 LLMRLQGDANN-LHGFEVDSRVYLLMKK 59 usage_00102.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 usage_00105.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLI-- 51 usage_00109.pdb 28 LLMRLEGN--YRNLNNLKQENAYLLIRR 53 LLMRLeGn y nlnnlkqenaYLLi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################