################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:38 2021 # Report_file: c_1372_27.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00843.pdb # 2: usage_01185.pdb # 3: usage_01186.pdb # 4: usage_01187.pdb # 5: usage_01188.pdb # 6: usage_01189.pdb # 7: usage_01377.pdb # 8: usage_01398.pdb # 9: usage_01399.pdb # 10: usage_01400.pdb # 11: usage_01401.pdb # 12: usage_01402.pdb # # Length: 92 # Identity: 16/ 92 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 92 ( 29.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 92 ( 39.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00843.pdb 1 -SCLWLLVGLSVHVVAVMLYLLD--------RSAMWFSWGVLLNAPRS--------F-SA 42 usage_01185.pdb 1 AYEIWMCIVFAYIGVSVVLFLVSDTDIFNSLWFSLGAFMQQ-------GADISPRSL-SG 52 usage_01186.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G--ISPRSL-SG 47 usage_01187.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G------SL-SG 43 usage_01188.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G-----RSL-SG 44 usage_01189.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G--ISPRSL-SG 47 usage_01377.pdb 1 --DVWVMMFVMLLIVSAVAVFV----------KAIWLLWGLVFN-------------NTS 35 usage_01398.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G--ISPRSL-SG 47 usage_01399.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G------SL-SG 43 usage_01400.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G------SL-SG 43 usage_01401.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G------SL-SG 43 usage_01402.pdb 1 AYEIWMCIVFAYIGVSVVLFLVS---IFNSLWFSLGAFMQQ-------G---SPRSL-SG 46 W Vsvvl lv s usage_00843.pdb 43 RILGMVWAGFAMIIVASYTANLAAFLV----- 69 usage_01185.pdb 53 RIVGGVWWFFTLIIISSYTANLAAFLT----- 79 usage_01186.pdb 48 RIVGGVWWFFTLIIISSYTANLAAFLTVERM- 78 usage_01187.pdb 44 RIVGGVWWFFTLIIISSYTANLAAFLTV---- 71 usage_01188.pdb 45 RIVGGVWWFFTLIIISSYTANLAAFLTVERM- 75 usage_01189.pdb 48 RIVGGVWWFFTLIIISSYTANLAAFLT----- 74 usage_01377.pdb 36 KIMVSVWAFFAVIFLASYTANLAAFMIQ---- 63 usage_01398.pdb 48 RIVGGVWWFFTLIIISSYTANLAAF------- 72 usage_01399.pdb 44 RIVGGVWWFFTLIIISSYTANLAAFLTVERMV 75 usage_01400.pdb 44 RIVGGVWWFFTLIIISSYTANLAAFL------ 69 usage_01401.pdb 44 RIVGGVWWFFTLIIISSYTANLAAFLTVERM- 74 usage_01402.pdb 47 RIVGGVWWFFTLIIISSYTANLAAFLT----- 73 rI g VW fF Ii SYTANLAAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################