################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:53 2021 # Report_file: c_0824_41.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00009.pdb # 2: usage_00348.pdb # 3: usage_00349.pdb # 4: usage_00350.pdb # 5: usage_00351.pdb # 6: usage_00352.pdb # 7: usage_00361.pdb # 8: usage_00362.pdb # # Length: 72 # Identity: 40/ 72 ( 55.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 72 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 72 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --EIESEIDAMPGVVESAVIGVPHADFGEGVTAFVVLR-EFAP---SEAQVL-HGLDGQL 53 usage_00348.pdb 1 PKEIESEIDA-PGVVESAVIGVPHADFGEGVTAVVVRDKGATI---DEAQVL-HGLDGQL 55 usage_00349.pdb 1 PKEIESEIDA-PGVVESAVIGVPHADFGEGVTAVVVRDKGATI---DEAQVL-HGLDGQL 55 usage_00350.pdb 1 PKEIESEIDA-PGVVESAVIGVPHADFGEGVTAVVVRDKGATI---DEAQVL-HGLDGQL 55 usage_00351.pdb 1 PKEIESEIDA-PGVVESAVIGVPHADFGEGVTAVVVRDKGATI---DEAQVL-HGLDGQL 55 usage_00352.pdb 1 --EIESEIDAMPGVVESAVIGVPHADFGEGVTAVVVRD-GATI---DEAQVL-HGLDGQL 53 usage_00361.pdb 1 --EIESEIDAMPGVVESAVIGVPHADFGEGVTAFVVLR-EFAPSEILAEELAF---VDRL 54 usage_00362.pdb 1 --EIESEIDAMPGVVESAVIGVPHADFGEGVTAFVVLR-EFAPSEILAEELAF---VDRL 54 EIESEIDA PGVVESAVIGVPHADFGEGVTA VV L usage_00009.pdb 54 A-F--MPVIFVD 62 usage_00348.pdb 56 AKFKPKKVIFVD 67 usage_00349.pdb 56 AKFKPKKVIFVD 67 usage_00350.pdb 56 AKFKPKKVIFVD 67 usage_00351.pdb 56 AKFKPKKVIFVD 67 usage_00352.pdb 54 A-F--MPVIFVD 62 usage_00361.pdb 55 A-F--MPVIFVD 63 usage_00362.pdb 55 A-F--MPVIFVD 63 A F VIFVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################