################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:09 2021 # Report_file: c_1203_140.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00096.pdb # 2: usage_00181.pdb # 3: usage_00182.pdb # 4: usage_00183.pdb # 5: usage_00349.pdb # 6: usage_00506.pdb # 7: usage_00564.pdb # 8: usage_00565.pdb # 9: usage_00566.pdb # 10: usage_00687.pdb # 11: usage_00960.pdb # # Length: 58 # Identity: 0/ 58 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 58 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 58 ( 87.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 ---------------QNA------V----EGSGFVHPFNVTRPG---IAAGV-TL-TW 28 usage_00181.pdb 1 K------------VS---VWPVGLVG--G------R-RYERPLVENGKVVGW-YTG-- 31 usage_00182.pdb 1 K------------VS---VWPVGLVG--G------R-RYERPLVENGKVVGW-YTG-- 31 usage_00183.pdb 1 K------------VS---VWPVGLVG--G------R-RYERPLVENGKVVGW-YT--- 30 usage_00349.pdb 1 G------------VS---VWPVGLVG--G------L-RFEGPQVQDGRVVGF-HT--- 30 usage_00506.pdb 1 ------------------SISFLSK----DL-IQVR-YYKTIREL--NGKEN-IS-H- 29 usage_00564.pdb 1 R------------VS---VWPVAFVG--G------L-RYEAPRVNGAGKVVRWKTV-- 32 usage_00565.pdb 1 R------------VS---VWPVAFVG--G------L-RYEAPRVNGAGKVVRWKTV-- 32 usage_00566.pdb 1 R------------VS---VWPVAFVG--G------L-RYEAPRVNGAGKVVRWKTV-- 32 usage_00687.pdb 1 -RLELKRISGRGFKN---DEEILIGN--G------T-IQKIGIWDG------------ 33 usage_00960.pdb 1 ------------------SDRPLVHFTPN------K-GWMND---------------- 17 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################