################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:54 2021 # Report_file: c_1489_447.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00168.pdb # 2: usage_01603.pdb # 3: usage_02878.pdb # 4: usage_03484.pdb # 5: usage_03783.pdb # # Length: 27 # Identity: 3/ 27 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 27 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 27 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00168.pdb 1 -RNLIEQHYKEHSEQSYFNDNCDFMV- 25 usage_01603.pdb 1 -VEQARGFYAEHDGKPFFDGLVEFM-- 24 usage_02878.pdb 1 SEEHLKQHYIDLKDRPFFPGLVKYMNS 27 usage_03484.pdb 1 SQADAEGFYAEHKERGFFGDLVAFM-- 25 usage_03783.pdb 1 -RNLIEQHYKEHSEQSYFNDLCDFMVS 26 Y eh F l fM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################