################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:10:13 2021 # Report_file: c_1095_31.html ################################################################################################ #==================================== # Aligned_structures: 51 # 1: usage_00006.pdb # 2: usage_00008.pdb # 3: usage_00013.pdb # 4: usage_00051.pdb # 5: usage_00089.pdb # 6: usage_00090.pdb # 7: usage_00091.pdb # 8: usage_00100.pdb # 9: usage_00116.pdb # 10: usage_00117.pdb # 11: usage_00139.pdb # 12: usage_00144.pdb # 13: usage_00145.pdb # 14: usage_00150.pdb # 15: usage_00153.pdb # 16: usage_00159.pdb # 17: usage_00204.pdb # 18: usage_00313.pdb # 19: usage_00314.pdb # 20: usage_00334.pdb # 21: usage_00340.pdb # 22: usage_00341.pdb # 23: usage_00342.pdb # 24: usage_00353.pdb # 25: usage_00354.pdb # 26: usage_00357.pdb # 27: usage_00386.pdb # 28: usage_00421.pdb # 29: usage_00484.pdb # 30: usage_00509.pdb # 31: usage_00575.pdb # 32: usage_00591.pdb # 33: usage_00594.pdb # 34: usage_00601.pdb # 35: usage_00603.pdb # 36: usage_00616.pdb # 37: usage_00617.pdb # 38: usage_00624.pdb # 39: usage_00640.pdb # 40: usage_00699.pdb # 41: usage_00701.pdb # 42: usage_00711.pdb # 43: usage_00712.pdb # 44: usage_00717.pdb # 45: usage_00742.pdb # 46: usage_00750.pdb # 47: usage_00754.pdb # 48: usage_00755.pdb # 49: usage_00758.pdb # 50: usage_00763.pdb # 51: usage_00788.pdb # # Length: 115 # Identity: 17/115 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/115 ( 60.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/115 ( 38.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00008.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00013.pdb 1 NKAVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 41 usage_00051.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00089.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00090.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00091.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00100.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00116.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00117.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00139.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00144.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00145.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00150.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00153.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00159.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00204.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00313.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00314.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00334.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00340.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00341.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00342.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00353.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00354.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00357.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00386.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00421.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00484.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00509.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00575.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00591.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00594.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00601.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00603.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00616.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00617.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00624.pdb 1 --TVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKS-EVDIVVSEDLNGTVKFSSS 57 usage_00640.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00699.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00701.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00711.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00712.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00717.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00742.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00750.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00754.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00755.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00758.pdb 1 --AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 39 usage_00763.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 usage_00788.pdb 1 ---VDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKV------------------R 38 VDwWalGvLiyEmaaGypPFf adQPiQiyeKivsgk r usage_00006.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00008.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00013.pdb 42 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 83 usage_00051.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00089.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00090.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00091.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00100.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00116.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00117.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00139.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----DGVNDIKNH-K-WFA 80 usage_00144.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00145.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00150.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00153.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----DGVNDIKNH-K-WFA 80 usage_00159.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00204.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00313.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00314.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00334.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH------ 77 usage_00340.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00341.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00342.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00353.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00354.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00357.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00386.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH------ 76 usage_00421.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00484.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00509.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00575.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00591.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00594.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00601.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00603.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00616.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00617.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00624.pdb 58 LPYPNNLNSVLAERLEKWLQLMLMWHP----RTDPTYGPNGCFKALDDILNL--- 105 usage_00640.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00699.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00701.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00711.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00712.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00717.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00742.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00750.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----DGVNDIKNH-K-WFA 81 usage_00754.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00755.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00758.pdb 40 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 81 usage_00763.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 usage_00788.pdb 39 FPSHF------SSDLKDLLRNLLQVDLTKRF-GNLK----NGVNDIKNH-K-WFA 80 fPshf ssdLkdlLrnlLqvdl gnlk gvndiknh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################