################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:03 2021 # Report_file: c_0699_130.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00516.pdb # 2: usage_00517.pdb # 3: usage_00580.pdb # 4: usage_00581.pdb # 5: usage_00697.pdb # 6: usage_00698.pdb # 7: usage_01100.pdb # 8: usage_01101.pdb # 9: usage_01357.pdb # 10: usage_01371.pdb # # Length: 55 # Identity: 4/ 55 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 55 ( 7.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 55 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00516.pdb 1 --FEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGK-VNIHSIGFSF- 51 usage_00517.pdb 1 --FEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW-- 51 usage_00580.pdb 1 KPFVLVIVIQSDTYQITVNGKPLVDFPQRLQG---ITRASLSGDLVFTRLTMYP- 51 usage_00581.pdb 1 KPFTLQILTREADFQVLVDKQPLTQFQYRLKELDQIKYVHMFGHVVQTHLEHQVP 55 usage_00697.pdb 1 --FSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT--- 50 usage_00698.pdb 1 --FSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT--- 50 usage_01100.pdb 1 -PFRVEILCEYPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG---- 50 usage_01101.pdb 1 -PFRVEILCEYPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG---- 50 usage_01357.pdb 1 --FEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGD-VQLDSVRIF-- 50 usage_01371.pdb 1 QPFRVEILCEHPRFRIFVDGHQLFDFYHRIETLSAIDTIKINGDLQLTKLG---- 51 F I V R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################