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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:49:17 2021
# Report_file: c_0654_2.html
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#====================================
# Aligned_structures: 8
#   1: usage_00449.pdb
#   2: usage_00452.pdb
#   3: usage_00453.pdb
#   4: usage_00588.pdb
#   5: usage_00589.pdb
#   6: usage_00590.pdb
#   7: usage_00595.pdb
#   8: usage_00596.pdb
#
# Length:         86
# Identity:       16/ 86 ( 18.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     18/ 86 ( 20.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/ 86 ( 29.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00449.pdb         1  LGWEATTETLYPADGGLEGRCDMALLVG-----HLHCNLKTTYRS-K--KNL-KMPGVYF   51
usage_00452.pdb         1  -----STEKMTVRDGSMKGDDAAYLK--LVGGGNHKCYFTTTYTAKKK---IPNLPQSHF   50
usage_00453.pdb         1  -----STEKMTVRDGSMKGDDASYLK--LVGGGNHKCYFTTTYTAKKK---IPNLPGSHF   50
usage_00588.pdb         1  LGWEASTEMLYPADSGLRGHSQMALK--LVGGGYLHCSLKTTYRSKKPAKNL-KMPGFYF   57
usage_00589.pdb         1  LGWEANTEMLYPADGGLRGHSQMALK--LVGGGYLHCSFKTTYRSKKPAKNL-KMPGFHF   57
usage_00590.pdb         1  LGWEANTEMLYPADGGLRGHSQMALK--LVGGGYLHCSFKTTYRSKKPAKNL-KMPGFHF   57
usage_00595.pdb         1  LGWEASTEMLYPADSGLRGHSQMALK--LVGGGYLHCSLKTTYRSKKPAKNL-KMPGFYF   57
usage_00596.pdb         1  LGWEANTEMLYPADSGLRGHNQMALK--LVGGGYLHCSLKTTYRSKKPAKNL-KMPGFYF   57
                                 TE     D    G     Lk          C   TTY   K        Pg  F

usage_00449.pdb        52  VDR--ER-KEADNETYVEQHEVAVAR   74
usage_00452.pdb        51  IGHRISSVV-N--GTKIGVMEDAIA-   72
usage_00453.pdb        51  IGHRISSVV-E--GTKIKVMEDAIA-   72
usage_00588.pdb        58  VDRKLERIKEADKETYVEQHEMAVA-   82
usage_00589.pdb        58  VDHRLERIKEADKETYVEQHEMAVA-   82
usage_00590.pdb        58  VDHRLERIKEADKETYVEQHEMAVA-   82
usage_00595.pdb        58  VDRKLERIKEADKETYVEQHEMAVA-   82
usage_00596.pdb        58  VDRKLERIKEADKETYVEQHEMAVA-   82
                                         T     E A A 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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