################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:16:52 2021 # Report_file: c_1076_62.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00066.pdb # 2: usage_00118.pdb # 3: usage_00316.pdb # 4: usage_00578.pdb # 5: usage_00579.pdb # 6: usage_00580.pdb # 7: usage_00916.pdb # 8: usage_00917.pdb # 9: usage_00918.pdb # 10: usage_01038.pdb # 11: usage_01116.pdb # 12: usage_01117.pdb # 13: usage_01133.pdb # 14: usage_01134.pdb # 15: usage_01397.pdb # 16: usage_01398.pdb # 17: usage_01399.pdb # 18: usage_01497.pdb # 19: usage_01635.pdb # # Length: 59 # Identity: 13/ 59 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 59 ( 32.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 ------PPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 52 usage_00118.pdb 1 AGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRY---FTIPEA---- 52 usage_00316.pdb 1 ------PPIY-AAILLYNTDIVPVGEYGKQLYELTRDLAERFNKRYGELFTIPEARIP- 51 usage_00578.pdb 1 -------PPLAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 51 usage_00579.pdb 1 -------PPLAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 51 usage_00580.pdb 1 ------PPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 52 usage_00916.pdb 1 -----YPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 53 usage_00917.pdb 1 AGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARI-- 57 usage_00918.pdb 1 -----YPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARI-- 52 usage_01038.pdb 1 ------YPPLAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIP- 52 usage_01116.pdb 1 ------YPVLAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARV-- 51 usage_01117.pdb 1 ------YPVLAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARV-- 51 usage_01133.pdb 1 -----YPVLQAADILLYKSTHVPVGEDQVQHMELVQDLAQGFNKKYGEFFPVPESILT- 53 usage_01134.pdb 1 -----YPVLQAADILLYKSTHVPVGEDQVQHMELVQDLAQGFNKKYGEFFPVPESILT- 53 usage_01397.pdb 1 -GLFSYPILMTADILMFNANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLPE----- 53 usage_01398.pdb 1 -GLFSYPILMTADILMFNANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLPEVKID- 57 usage_01399.pdb 1 -GLFSYPILMTADILMFNANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLPE----- 53 usage_01497.pdb 1 -----YPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSR 54 usage_01635.pdb 1 -----YPVLMAADILLYQTNQVPVGEDQKQHLELSRDIASRFNNLYGDIFKIPE----- 49 AdIL VPVG dq qh E d A N F PE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################