################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:13 2021 # Report_file: c_0356_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00095.pdb # 7: usage_00113.pdb # 8: usage_00127.pdb # 9: usage_00132.pdb # # Length: 124 # Identity: 6/124 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/124 ( 10.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/124 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 DLITPNETEAEVLTGIT-----VYDDSSAQQAA-DALHCK-GIEIVIITLGS----KG-- 47 usage_00003.pdb 1 DLITPNETEAEVLTGIT-----VYDDSSAQQAA-DALHCK-GIEIVIITLGS----KG-- 47 usage_00004.pdb 1 DLITPNETEAEVLTGIT-----VYDDSSAQQAA-DALHCK-GIEIVIITLGS----KG-- 47 usage_00005.pdb 1 DLITPNETEAEVLTGIT-----VYDDSSAQQAA-DALHCK-GIEIVIITLGS----KG-- 47 usage_00006.pdb 1 DLITPNETEAEVLTGIT-----VYDDSSAQQAA-DALHCK-GIEIVIITLGS----KG-- 47 usage_00095.pdb 1 HTIKPNRHEAEILAGFP-----ITDTDDLIKAS-NYFLGL-GIKKVFISLDA----DG-- 47 usage_00113.pdb 1 DVLIANEEDIEKVLGISVEGLD--NREAYAKIA-EEVTRKYNFKTVGITLRESISATVNY 57 usage_00127.pdb 1 TVAVGNKEECEIAVGET----------EPERAG-RALLER-GVELAIVKQGP----KG-- 42 usage_00132.pdb 1 SLITPNRAELREVVG-Q-----WKSEDDLRARVANLRAEL-DIDALLLTRSE----EG-- 47 N e e G g usage_00001.pdb 48 ---VWLSQNGRGQRIPGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAIS 104 usage_00003.pdb 48 ---VWLSQNGRGQRIPGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAIS 104 usage_00004.pdb 48 ---VWLSQNGRGQRIPGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAIS 104 usage_00005.pdb 48 ---VWLSQNGRGQRIPGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAIS 104 usage_00006.pdb 48 ---VWLSQNGRGQRIPGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAIS 104 usage_00095.pdb 48 ---IFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYN-K-PIEDIVKFA-T-SNIT 100 usage_00113.pdb 58 WSV--VFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSL-GFDSQKKAEFAAAASCLK 114 usage_00127.pdb 43 ---V-A-TKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALV 97 usage_00132.pdb 48 ---T-LFSAGGELHAPALAREVFDVSGAGDTVIATVAT-LGAGVPLVDAVVLANRAAGIV 102 AGD f l p fA usage_00001.pdb 105 V--- 105 usage_00003.pdb 105 VT-- 106 usage_00004.pdb 105 VTR- 107 usage_00005.pdb 105 VT-- 106 usage_00006.pdb 105 VTR- 107 usage_00095.pdb 101 ISH- 103 usage_00113.pdb 115 HTI- 117 usage_00127.pdb 98 AS-- 99 usage_00132.pdb 103 VGKL 106 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################