################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:15 2021 # Report_file: c_0417_12.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00135.pdb # 8: usage_00136.pdb # 9: usage_00137.pdb # 10: usage_00138.pdb # # Length: 51 # Identity: 41/ 51 ( 80.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 51 ( 86.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 51 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -QRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 48 usage_00002.pdb 1 NQRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 49 usage_00003.pdb 1 ---ELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 46 usage_00004.pdb 1 ---ELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 46 usage_00022.pdb 1 -QRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 48 usage_00023.pdb 1 NQRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 49 usage_00135.pdb 1 -QRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 48 usage_00136.pdb 1 NQRELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAK- 49 usage_00137.pdb 1 --RELK-VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKP 48 usage_00138.pdb 1 HVDTVCIVLKRAEGDGEGFIVIDDLVDT--TAVAIREMYPKAHFVTIFAK- 48 elk VLKRAEGDGEGFIVIDDLVDT TAVAIREMYPKAHFVTIFAK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################