################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:53 2021 # Report_file: c_1221_31.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00344.pdb # 2: usage_01117.pdb # 3: usage_01118.pdb # 4: usage_01119.pdb # 5: usage_01120.pdb # 6: usage_01266.pdb # 7: usage_02430.pdb # 8: usage_02431.pdb # 9: usage_02432.pdb # 10: usage_02433.pdb # # Length: 26 # Identity: 2/ 26 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 26 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 26 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00344.pdb 1 PQVFA--PDGSHIGGFD--QLREYFK 22 usage_01117.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_01118.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_01119.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_01120.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_01266.pdb 1 PFYESPSQDRIIFNDKSVASILPT-- 24 usage_02430.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_02431.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_02432.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 usage_02433.pdb 1 PFVVA--PDGRVSKGRPKNLKSWLES 24 Pfv a pDg g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################