################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:47 2021 # Report_file: c_1484_217.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_01622.pdb # 2: usage_01633.pdb # 3: usage_02772.pdb # 4: usage_03157.pdb # 5: usage_03158.pdb # 6: usage_03970.pdb # 7: usage_03971.pdb # 8: usage_03972.pdb # 9: usage_03973.pdb # 10: usage_03974.pdb # 11: usage_03975.pdb # 12: usage_03976.pdb # 13: usage_03977.pdb # 14: usage_03978.pdb # 15: usage_03979.pdb # 16: usage_04425.pdb # 17: usage_04831.pdb # 18: usage_04870.pdb # 19: usage_04871.pdb # 20: usage_04872.pdb # 21: usage_04873.pdb # # Length: 97 # Identity: 12/ 97 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 97 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 97 ( 53.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01622.pdb 1 -----------------------LM---QQVNVLK----------LTVEDLEKERDFYFG 24 usage_01633.pdb 1 ----------------EAA---ELM---QQVNVLK----------LTVEDLEKERDFYFG 28 usage_02772.pdb 1 --------------DDEAA---ELM---QQVNVLK----------LTVEDLEKERDFYFG 30 usage_03157.pdb 1 ---------------SDAIKKKQLK---LDKENAL----------DRAEQAEADKDFYFG 32 usage_03158.pdb 1 ----------------DAIKKKQLK---LDKENAL----------DRAEQAEADKDFYFG 31 usage_03970.pdb 1 -----PKDTLLREFQEEIA---RLK---AQLEKKG----------MLVEDLEKERDFYFG 39 usage_03971.pdb 1 -----PKDTLLREFQEEIA---RLK---AQLEKKG----------MLVEDLEKERDFYFG 39 usage_03972.pdb 1 ---------T----DEALL---KRYRKEIDLKKQLEEVSLETRAQAEKDQLEKERDFYFG 44 usage_03973.pdb 1 ---------T----DEALL---KRYRKEIDLKKQLEEVSLETRAQAEKDQLEKERDFYFG 44 usage_03974.pdb 1 ---------T----DEALL---KRYRKEIDLKKQLEEVSLETRAQAEKDQLEKERDFYFG 44 usage_03975.pdb 1 ---------------ALAE---EWK---RRYEKEK----------EKVEDLEKERDFYFG 29 usage_03976.pdb 1 --------------DALAE---EWK---RRYEKEK----------EKVEDLEKERDFYFG 30 usage_03977.pdb 1 --------------DALAE---EWK---RRYEKEK----------EKVEDLEKERDFYFG 30 usage_03978.pdb 1 ----------------LAE---EWK---RRYEKEK----------EKVEDLEKERDFYFG 28 usage_03979.pdb 1 -------DALAEEWKRRYE---KEK---EKNARLK----------GKVEDLEKERDFYFG 37 usage_04425.pdb 1 ----------------EAA---ELM---QQVNVLK----------LTVEDLEKERDFYFG 28 usage_04831.pdb 1 LGSLVAIQAELTKSQETIG---SLN---EEIEQYK----------GTVSTLEIEREFYFN 44 usage_04870.pdb 1 -------------KKALIK---EYT---EEIERLK----------RDLAALEKERDFYFG 31 usage_04871.pdb 1 ------------TKKALIK---EYT---EEIERLK----------RDLAALEKERDFYFG 32 usage_04872.pdb 1 ---------TAEEWKRRYE---KEK---EKNARLK----------GKVEDLEKERDFYFG 35 usage_04873.pdb 1 ---------TAEEWKRRYE---KEK---EKNARLK----------GKVEDLEKERDFYFG 35 E dFYFg usage_01622.pdb 25 KLRNIELICQENEGE--------NDPVLQRIVDILY- 52 usage_01633.pdb 29 KLRNIELICQENEGE--------NDPVLQRIVDILY- 56 usage_02772.pdb 31 KLRNIELICQENEGE--------NDPVLQRIVDILY- 58 usage_03157.pdb 33 KLRNIELICQENEGE--------NDPVLQRIVDILY- 60 usage_03158.pdb 32 KLRNIELICQENEGE--------NDPVLQRIVDILY- 59 usage_03970.pdb 40 KLRNIELICQENEGE--------NDPVLQRIVDILY- 67 usage_03971.pdb 40 KLRNIELICQENEGE--------NDPVLQRIVDILY- 67 usage_03972.pdb 45 KLRNIELICQEN--------------VLQRIVDILYA 67 usage_03973.pdb 45 KLRNIELICQENEGE--------NDPVLQRIVDILY- 72 usage_03974.pdb 45 KLRNIELICQENE-----------DPVLQRIVDILY- 69 usage_03975.pdb 30 KLRNIELICQ-N------------DPVLQRIVDILY- 52 usage_03976.pdb 31 KLRNIELICQENEGE--------NDPVLQRIVDILY- 58 usage_03977.pdb 31 KLRNIELICQENEGE--------NDPVLQRIVDILY- 58 usage_03978.pdb 29 KLRNIELICQEN------------DPVLQRIVDILY- 52 usage_03979.pdb 38 KLRNIELICQENEGE--------NDPVLQRIVDILY- 65 usage_04425.pdb 29 KLRNIELICQENEGE--------NDPVLQRIVDILY- 56 usage_04831.pdb 45 KLRDIEILVHTTQDLINEGGGAL-LRFVKKVESILY- 79 usage_04870.pdb 32 KLRNIELICQENEGE--------NDPVLQRIVDILY- 59 usage_04871.pdb 33 KLRNIELICQENEGE--------NDPVLQRIVDILY- 60 usage_04872.pdb 36 KLRNIELICQENEGE--------NDPVLQRIVDILY- 63 usage_04873.pdb 36 KLRNIELICQENEGE--------NDPVLQRIVDILY- 63 KLRnIElicq n vlqrivdILY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################