################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:58 2021 # Report_file: c_1010_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00216.pdb # 2: usage_00319.pdb # 3: usage_00441.pdb # 4: usage_00514.pdb # 5: usage_00515.pdb # 6: usage_00516.pdb # 7: usage_00555.pdb # # Length: 52 # Identity: 1/ 52 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 52 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 52 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 RLASSAGEALPAEIGQRFQRHFGL----DIVDGIG-STEMLHIFL---SNLP 44 usage_00319.pdb 1 RMFTNSAAALPQVTIDALRSAFPG----AQVVRMYGQTE-CKRIS---IMP- 43 usage_00441.pdb 1 --LVLSDKA-TVAQAQRFFRRIELDCNDNLFIVDE----ADKYLGTVR---- 41 usage_00514.pdb 1 RLASSAGEALPAEIGQRFQRHFGL----DIVDGIG-STEMLHIFL---SNLP 44 usage_00515.pdb 1 RLASSAGEALPAEIGQRFQRHFGL----DIVDGIG-STEMLHIFL---SNLP 44 usage_00516.pdb 1 RLASSAGEALPAEIGQRFQRHFGL----DIVDGIG-STEMLHIFL---SNLP 44 usage_00555.pdb 1 RLASSAGEALPAEIGQRFQRHFGL----DIVDGIG-STEMLHIFL---SNLP 44 A p qrf r f l v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################