################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:20:41 2021 # Report_file: c_0185_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00061.pdb # 7: usage_00062.pdb # 8: usage_00063.pdb # 9: usage_00064.pdb # 10: usage_00065.pdb # 11: usage_00066.pdb # 12: usage_00067.pdb # 13: usage_00068.pdb # 14: usage_00078.pdb # 15: usage_00079.pdb # # Length: 166 # Identity: 62/166 ( 37.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/166 ( 37.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/166 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 --YQSFEWVVKHGGIASEADYPYKARDGKCKAN--EIQDKVTIDNYGVQILS-NESTESE 55 usage_00006.pdb 1 --YQSFEWVVKHGGIASEADYPYKARDGKCKAN--EIQDKVTIDNYGVQILS-NESTESE 55 usage_00038.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00039.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00040.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00061.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00062.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00063.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00064.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00065.pdb 1 -MTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 49 usage_00066.pdb 1 -MTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 49 usage_00067.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00068.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00078.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 usage_00079.pdb 1 YMTEAFQYIIDNGGIEADASYPYKAMDEKCHYNSK--NRAATCSRYIQLP-FG------- 50 F GGI A YPYKA D KC N T Y usage_00005.pdb 56 AESSLQSFVLE-QPISVSIDA-K--DFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSEDG 111 usage_00006.pdb 56 AESSLQSFVLE-QPISVSIDA-K--DFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSEDG 111 usage_00038.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00039.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00040.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00061.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00062.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00063.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00064.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00065.pdb 50 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 106 usage_00066.pdb 50 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 106 usage_00067.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00068.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00078.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 usage_00079.pdb 51 DEDALKEAVATKGPVSVGIDASHSSF-FFYKSGVYDDPSCT--GNVNHGVLVVGYGTLDG 107 E L V P SV IDA FY G YD C NH VL VGYG DG usage_00005.pdb 112 VDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEK 157 usage_00006.pdb 112 VDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIE- 156 usage_00038.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00039.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00040.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00061.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00062.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00063.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00064.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00065.pdb 107 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 147 usage_00066.pdb 107 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 147 usage_00067.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00068.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00078.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 usage_00079.pdb 108 KDYWLVKNSWGLNFGDQGYIRMARNN-K--NHCGIASYCSYPEI-- 148 DYW KNSWG G GYIR RN CG SYP I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################