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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:47:00 2021
# Report_file: c_0151_4.html
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#====================================
# Aligned_structures: 8
#   1: usage_00005.pdb
#   2: usage_00006.pdb
#   3: usage_00060.pdb
#   4: usage_00087.pdb
#   5: usage_00104.pdb
#   6: usage_00111.pdb
#   7: usage_00205.pdb
#   8: usage_00214.pdb
#
# Length:        121
# Identity:       36/121 ( 29.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     73/121 ( 60.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/121 ( 14.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  -VQLQESGPGLVAPSQSLSITCTVSGFSLTG--YGVNWVRQPPGKGLEWLGMIWGDGNTD   57
usage_00006.pdb         1  -VQLQESGPGLVAPSQSLSITCTVSGFSLTG--YGVNWVRQPPGKGLEWLGMIWGDGNTD   57
usage_00060.pdb         1  --TLKESGPGILQPSQTLSLTCSFSGFSLSTYGIGVGWIRQPSGKGLEWLAHIWWNDNKY   58
usage_00087.pdb         1  -VQLQESGPGLVAPSQSLSITCTVSGFSLTG--YGVNWVRQPPGKGLEWLGMIWGDGNTD   57
usage_00104.pdb         1  QVQLVESGPGLVAPSQSLSITCTVSGISLSR--YNVHWVRQSPGKGLEWLGMIWGGGSIE   58
usage_00111.pdb         1  ---LRESGPDLVTPSQSLSLTCTVTGYSITS-GYSWHWNRQFPGNKLEWMGYIHYSGSTN   56
usage_00205.pdb         1  -VQLQESGPGLVAPSQSLSITCTVSGFSLTG--YGVNWVRQPPGKGLEWLGMIWGDGNTD   57
usage_00214.pdb         1  -VQLQESGPGLV----SLSITCTVSGFSLTG--YGVNWVRQPPGKGLEWLGMIWGDGNTD   53
                              L ESGPglv    sLS TCtvsG Sl    y v W RQ pGkgLEWlg Iw  g   

usage_00005.pdb        58  YNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD--YRL-DYWGQGTTVTV-  113
usage_00006.pdb        58  YNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD--YRL-DYWGQGTTLTV-  113
usage_00060.pdb        59  YNIALRSRLTISKDTSNNQVFLKIASVDTADTATYYCARIPD--DHY-FDYWGQGTTLTV  115
usage_00087.pdb        58  YNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD--YRL-DYWGQGTTLTV-  113
usage_00104.pdb        59  YNPALKSRLSISKDNSKSQIFLKMNSLQTDDSAMYYCVSYGYGGD-RFSYWGQGTLVTV-  116
usage_00111.pdb        57  YNPSLRGRISITRDTSKNQFFLQLNSVTTEDTATYYCARYG-------GYWGQGTSVTV-  108
usage_00205.pdb        58  YNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD--YRL-DYWGQGTTVTV-  113
usage_00214.pdb        54  YNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD--YRL-DYWGQGTTLTV-  109
                           YN aL sRlsIskD Sk Q FLk nS  T DtA YYCar          ywgqgt  tv 

usage_00005.pdb            -     
usage_00006.pdb            -     
usage_00060.pdb       116  S  116
usage_00087.pdb            -     
usage_00104.pdb       117  S  117
usage_00111.pdb       109  S  109
usage_00205.pdb            -     
usage_00214.pdb            -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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