################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:54 2021 # Report_file: c_1272_44.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00381.pdb # 2: usage_00475.pdb # 3: usage_00476.pdb # 4: usage_00477.pdb # 5: usage_00520.pdb # 6: usage_00556.pdb # 7: usage_00592.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 41 ( 51.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00381.pdb 1 GP-----IRTLAM--SAIA-----EAGAQIQLLEEGWDQRA 29 usage_00475.pdb 1 ------AKVRIYQLAKELGM----ETQELL-ELLDQMG--- 27 usage_00476.pdb 1 ------AKVRIYQLAKELGM----ETQELL-ELLDQMG--- 27 usage_00477.pdb 1 ------AKVRIYQLAKELGM----ETQELL-ELLDQMG--- 27 usage_00520.pdb 1 --RKSYVTVHPWA--NFLGL----TPEEAA-LSVID----- 27 usage_00556.pdb 1 ----G-SHMNTNMVASELGV----SAKTVQ-RWVKQLN--- 28 usage_00592.pdb 1 ------ESFDLDAAAQCLGVVPTQV-RLFE-RLLQILAEVG 33 lg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################