################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:34 2021 # Report_file: c_1481_61.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00043.pdb # 2: usage_00573.pdb # 3: usage_00741.pdb # 4: usage_00742.pdb # 5: usage_00743.pdb # 6: usage_01501.pdb # 7: usage_02189.pdb # 8: usage_02696.pdb # 9: usage_02781.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 56 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 56 ( 71.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 -TREQVTEAFREFTKG-------------NQNIL------IAYRDRLKAIRATLEI 36 usage_00573.pdb 1 ---VTDYVKKELKAI-KDPNSD--YL---SPK--YLQKL-ADKK------------ 32 usage_00741.pdb 1 --SEEEIREAFRVFD-KDG---NGYI---SAAEL------RHVMTNLGEKL----- 36 usage_00742.pdb 1 ---EEEIREAFRVFD-KDG---NGYI---SAAEL------RHVMTNLGEKL----- 35 usage_00743.pdb 1 --SEEEIREAFRVFD-KDG---NGYI---SAAEL------RHVMTNLGEKL----- 36 usage_01501.pdb 1 ------STRMIAIFD-EDG---GGDVDFQEFVSG------LSAFS----------- 29 usage_02189.pdb 1 ---RERMERAFKMFD-KDG---SGKI---STKELDFNEFVEMLQ------------ 34 usage_02696.pdb 1 E-VLALLSRVEAKGK-GIL-----QQ---NQI--IAEFEALPEQ------------ 32 usage_02781.pdb 1 ---EEEIREAFRVFD-KDG---NGYI---SAAEL------RHVTNLGEKL------ 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################