################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:37 2021 # Report_file: c_1434_191.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00051.pdb # 2: usage_00053.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_02628.pdb # 6: usage_02629.pdb # 7: usage_03078.pdb # 8: usage_03079.pdb # 9: usage_03080.pdb # 10: usage_03413.pdb # 11: usage_03414.pdb # 12: usage_03620.pdb # # Length: 90 # Identity: 72/ 90 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 90 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 90 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_00053.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_00054.pdb 1 DRVRFLQTIKDIASAIKELLDTVNNVFKKY----RRALEHQKKEFVKYSKSFSDTLKTYF 56 usage_00055.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKY----R-ALEHQKKEFVKYSKSFSDTLKTYF 54 usage_02628.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVF-----------EHQKKEFVKYSKSFSDTLKTYF 48 usage_02629.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKY-Q-NRRALEHQKKEFVKYSKSFSDTLKTYF 57 usage_03078.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_03079.pdb 1 ----FLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 56 usage_03080.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_03413.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_03414.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 usage_03620.pdb 1 -RVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYF 59 FLQTIKDIASAIKELLDTVNNVF EHQKKEFVKYSKSFSDTLKTYF usage_00051.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKT-- 87 usage_00053.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKTVA 89 usage_00054.pdb 57 KDGKAINVFVSANRLIHQTNLILQTFKT-- 84 usage_00055.pdb 55 KDGKAINVFVSANRLIHQTNLILQTFK--- 81 usage_02628.pdb 49 KDGKAINVFVSANRLIHQTNLILQTFK--- 75 usage_02629.pdb 58 KDGKAINVFVSANRLIHQTNLILQTFKT-- 85 usage_03078.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKTVA 89 usage_03079.pdb 57 KDGKAINVFVSANRLIHQTNLILQTFKT-- 84 usage_03080.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKT-- 87 usage_03413.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKTVA 89 usage_03414.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFKT-- 87 usage_03620.pdb 60 KDGKAINVFVSANRLIHQTNLILQTFK--- 86 KDGKAINVFVSANRLIHQTNLILQTFK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################