################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:50 2021 # Report_file: c_0935_129.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00529.pdb # 2: usage_00634.pdb # 3: usage_01143.pdb # 4: usage_01144.pdb # 5: usage_01156.pdb # 6: usage_01394.pdb # # Length: 61 # Identity: 12/ 61 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 61 ( 42.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 61 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00529.pdb 1 -DPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNA 59 usage_00634.pdb 1 --PVINLGYARYQGVRLEA------GVDEFLGMRYASPPIGDLRFRAPQDPPANQTLQSA 52 usage_01143.pdb 1 -YPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNT 59 usage_01144.pdb 1 QYPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNT 60 usage_01156.pdb 1 --PVVNTAYGRVRGVRRELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNA 58 usage_01394.pdb 1 --TVVETRYGRLRGEMNE-------GVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREA 51 pvv t yg rG V lG pYA pP G RF pPe P w r usage_00529.pdb 60 T 60 usage_00634.pdb 53 T 53 usage_01143.pdb 60 T 60 usage_01144.pdb 61 T 61 usage_01156.pdb 59 T 59 usage_01394.pdb 52 T 52 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################