################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:15 2021 # Report_file: c_1471_97.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00252.pdb # 2: usage_00253.pdb # 3: usage_00286.pdb # 4: usage_00287.pdb # 5: usage_00410.pdb # 6: usage_00411.pdb # 7: usage_00412.pdb # 8: usage_00413.pdb # 9: usage_00705.pdb # 10: usage_01119.pdb # 11: usage_01120.pdb # 12: usage_01121.pdb # # Length: 17 # Identity: 4/ 17 ( 23.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 17 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 17 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00252.pdb 1 -KVAEDYGIIYALEVVN 16 usage_00253.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00286.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00287.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00410.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00411.pdb 1 -KVAEDYGIIYALEVVN 16 usage_00412.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00413.pdb 1 IKVAEDYGIIYALEVVN 17 usage_00705.pdb 1 KEIATEYSFIKYTELEL 17 usage_01119.pdb 1 IKVAEDYGIIYALEAVN 17 usage_01120.pdb 1 IKVAEDYGIIYALEAVN 17 usage_01121.pdb 1 IKVAEDYGIIYALEAVN 17 kvAedYgiIyalE vn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################