################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:07 2021 # Report_file: c_0645_131.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00144.pdb # 2: usage_00398.pdb # 3: usage_00550.pdb # 4: usage_00659.pdb # # Length: 76 # Identity: 8/ 76 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 76 ( 19.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 76 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 G-WT----PNL-----------------------------DSNKEYLQVDLRFLTMLTAI 26 usage_00398.pdb 1 A-WC----PEIPVEPD-------------------------DLKEFLQIDLHTLHFITLV 30 usage_00550.pdb 1 -QMSASSSYKTWNL-RAFGWYPHLGRLDNQGKINAWTAQSNSAKEWLQVDLGTQRQVTGI 58 usage_00659.pdb 1 A-WC----PAGSVF-P-------------------------KEEEYLQVDLQRLHLVALV 29 w p kE LQvDL l t usage_00144.pdb 27 ATQGAISRETQNGYYV 42 usage_00398.pdb 31 GTQGRHAG-GHGIEFA 45 usage_00550.pdb 59 ITQGARDF-GHI-QYV 72 usage_00659.pdb 30 GTQGRHAG-GLGKEFS 44 TQG g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################