################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1453_102.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00246.pdb # 5: usage_00475.pdb # 6: usage_00602.pdb # 7: usage_01531.pdb # 8: usage_01662.pdb # 9: usage_01781.pdb # 10: usage_01938.pdb # 11: usage_02026.pdb # 12: usage_02027.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 35 ( 25.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 35 ( 74.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 NYGVTVLPTFK--------GQPSKPF--------- 18 usage_00031.pdb 1 NYGVTVLPTFK--------GQPSKPF--------- 18 usage_00032.pdb 1 NYGVTVLPTFK--------GQPSKPF--------- 18 usage_00246.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVLSAGIN 27 usage_00475.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVL----- 22 usage_00602.pdb 1 -----ENIDPVLNPVLNKP----SFMIFLFTRD-- 24 usage_01531.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVLSAGI- 26 usage_01662.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVL----- 22 usage_01781.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVL----- 22 usage_01938.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVL----- 22 usage_02026.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVLSAGIN 27 usage_02027.pdb 1 NYGVTVLPTFK--------GQPSKPFVGVLSAGIN 27 vlptfk kpf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################