################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:55 2021 # Report_file: c_0974_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00089.pdb # 2: usage_00300.pdb # 3: usage_00358.pdb # 4: usage_00680.pdb # 5: usage_00731.pdb # 6: usage_00818.pdb # 7: usage_00819.pdb # 8: usage_00820.pdb # 9: usage_01095.pdb # # Length: 75 # Identity: 4/ 75 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 75 ( 10.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 75 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 TPFAVLEQAD-KVIGFANFIEL----------------EKGKSELAAFYLLPEVTQRGLG 43 usage_00300.pdb 1 TLSLVAEEDG-QVLGHIAFSPVL---IGGA--------EKGWYGLGPVSVLPARQGEGIG 48 usage_00358.pdb 1 DELYTYQKDN-RIIGTIALVYKRIKE--KGIWWVPEELNEKVGLIEFFVVDPEFQGKGIG 57 usage_00680.pdb 1 VIALAIRSPQGEAVGCGAIVLS----------------EEGFGEMKRVYIDPQHRGQQLG 44 usage_00731.pdb 1 --FSILEHDG-NLYGCAALKTFA---------------EADCGEIACLAVSPQAQDGGYG 42 usage_00818.pdb 1 --FSILEHDG-NLYGCAALKTFA---------------EADCGEIACLAVSPQAQDGGYG 42 usage_00819.pdb 1 --FSILEHDG-NLYGCAALKTFA---------------EADCGEIACLAVSPQAQDGGYG 42 usage_00820.pdb 1 --FSILEHDG-NLYGCAALKTFA---------------EADCGEIACLAVSPQAQDGGYG 42 usage_01095.pdb 1 -EFSILEHDG-NLYGCAALKTFA---------------EADCGEIACLAVSPQAQDGGYG 43 G a e P g G usage_00089.pdb 44 TELLEVGTLF----- 53 usage_00300.pdb 49 GKLIREGLAQLRGAG 63 usage_00358.pdb 58 STLLEFAVKRLRSLG 72 usage_00680.pdb 45 EKLLAALEAKARQRD 59 usage_00731.pdb 43 ERLLAHIIDKARGIG 57 usage_00818.pdb 43 ERLLAHIIDKARGIG 57 usage_00819.pdb 43 ERLLAHIIDKARGI- 56 usage_00820.pdb 43 ERLLAHIIDKARGIG 57 usage_01095.pdb 44 ERLLAHIIDKARGIG 58 Ll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################