################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:02 2021 # Report_file: c_0210_1.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00005.pdb # 3: usage_00008.pdb # 4: usage_00011.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00019.pdb # 9: usage_00031.pdb # 10: usage_00032.pdb # 11: usage_00033.pdb # 12: usage_00034.pdb # 13: usage_00043.pdb # 14: usage_00044.pdb # # Length: 115 # Identity: 34/115 ( 29.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/115 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/115 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --IVLTQAAFSNPVTLGASASISCRSSKSLLNSNGIIHMYWYLQKPGQSPQLLIYQMSKL 58 usage_00005.pdb 1 DIVMNQSP-PSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTR 59 usage_00008.pdb 1 -LVMTQSP-LSLPVSLGDQASISCRSSQSLVHSSGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00011.pdb 1 -IVMTQTP-KFLLVSAGDRVTITCKASQSVS-----NDVTWYQQKAGQSPKLLIYSASNR 53 usage_00016.pdb 1 -IELTQSP-LSLPVSLGDQASISCRSSQSLVHSNGNTSLHWYLKKPGQSPKLLIYKVSTR 58 usage_00017.pdb 1 DVLMTQTP-LSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNR 59 usage_00018.pdb 1 DVLMTQTP-LSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNR 59 usage_00019.pdb 1 DVLMTQTP-LSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNR 59 usage_00031.pdb 1 --VMTQSP-LSLPVTPGEPASISCRSSQPLLAMDGHNYLDWYLQKPGQSPQVLIYQSKWR 57 usage_00032.pdb 1 --VMTQSP-LSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTR 57 usage_00033.pdb 1 --VMTQSP-LSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTR 57 usage_00034.pdb 1 --VMTQSP-LSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTR 57 usage_00043.pdb 1 DIVMTQSP-LSLPVTPGEPASISCRSSQSIVHSNGHTYLEWYLQKPGQSPRLLIYQVSTR 59 usage_00044.pdb 1 DIVMTQSP-LSLPVTPGEPASISCRSSQSIVHSNGHTYLEWYLQKPGQSPRLLIYQVSTR 59 q p sl V G sI C Sq WYlqKpGQsP LIY s r usage_00002.pdb 59 ASGAPDRFSGSGSGTDFTLRISRVEAEDVGVYYCAQNLELPYTFGGGTKL----- 108 usage_00005.pdb 60 ASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIKRT- 113 usage_00008.pdb 59 FSGVPDRFSGSGSGTDFTLTISRVEAEDLGVYYCFQSSHVPLTFGAGTKLEL--- 110 usage_00011.pdb 54 YSGVPDRFTGSGYGTAFTFTISTVQAEDLAVYFCQQD--Y-SSFGGGTKLEIKRA 105 usage_00016.pdb 59 FSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPFTFGSGTKLEL--- 110 usage_00017.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLEL--- 111 usage_00018.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLEL--- 111 usage_00019.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLEL--- 111 usage_00031.pdb 58 ASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIKRT 112 usage_00032.pdb 58 ASGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEIKRT 112 usage_00033.pdb 58 ASGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEIKRT 112 usage_00034.pdb 58 ASGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEIKRT 112 usage_00043.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQASLVPLTFGQGTKLEI--- 111 usage_00044.pdb 60 FSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQASLVPLTFGQGTKLEIKRT 114 SGvPDRFsGSGsGTdFTl I rVe ED g Y C Q fg gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################