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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:04:21 2021
# Report_file: c_1250_6.html
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#====================================
# Aligned_structures: 7
#   1: usage_00001.pdb
#   2: usage_00007.pdb
#   3: usage_00008.pdb
#   4: usage_00009.pdb
#   5: usage_00010.pdb
#   6: usage_01470.pdb
#   7: usage_01471.pdb
#
# Length:         70
# Identity:        8/ 70 ( 11.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     18/ 70 ( 25.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           15/ 70 ( 21.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  AFVHVIAFDLAEPARAEPAA-AREGAATALRTWAEHAARLHAD-GP---EGAASAGLLPA   55
usage_00007.pdb         1  ARGHLVAFDLAA-G------AGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPS   53
usage_00008.pdb         1  ARGHLVAFDLAA-G------AGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPS   53
usage_00009.pdb         1  ARGHLVAFDLAA-G------AGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPS   53
usage_00010.pdb         1  ARGHLVAFDLAA-G------AGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPS   53
usage_01470.pdb         1  AHAVFLGLDLRK-G------TGRKELGRLMRLLTDDARRLTQGRPALADPEPDLAPLPSR   53
usage_01471.pdb         1  AHAVFLGLDLRK-G------TGRKELGRLMRLLTDDARRLTQGRPALADPEPDLAPLPSR   53
                           A       DL   g       gRke   l R   d ArRL  g pa              

usage_00001.pdb        56  SLMVTIGIGG   65
usage_00007.pdb        54  SLTVTFGF--   61
usage_00008.pdb        54  SLTVTFGF--   61
usage_00009.pdb        54  SLTVTFGF--   61
usage_00010.pdb        54  SLTVTFGF--   61
usage_01470.pdb        54  LTFTFGF---   60
usage_01471.pdb        54  LTFTFGF---   60
                                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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