################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:47:30 2021 # Report_file: c_0639_10.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00044.pdb # 9: usage_00045.pdb # 10: usage_00046.pdb # 11: usage_00072.pdb # 12: usage_00073.pdb # 13: usage_00074.pdb # 14: usage_00075.pdb # 15: usage_00076.pdb # 16: usage_00077.pdb # 17: usage_00090.pdb # 18: usage_00091.pdb # 19: usage_00092.pdb # 20: usage_00101.pdb # 21: usage_00106.pdb # 22: usage_00107.pdb # # Length: 157 # Identity: 41/157 ( 26.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/157 ( 50.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/157 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 ---GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00028.pdb 1 ---GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00029.pdb 1 ---GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00030.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00031.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00042.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00043.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00044.pdb 1 EGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 60 usage_00045.pdb 1 ---GFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 57 usage_00046.pdb 1 ---------------RPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 45 usage_00072.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00073.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00074.pdb 1 ---GFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00075.pdb 1 ---GFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 57 usage_00076.pdb 1 ---GFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 57 usage_00077.pdb 1 ----ARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQ 56 usage_00090.pdb 1 ---GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00091.pdb 1 ---GFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 57 usage_00092.pdb 1 ---------------RPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAE 45 usage_00101.pdb 1 EGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVD 60 usage_00106.pdb 1 ---GFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 57 usage_00107.pdb 1 EGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLAD 60 R vAAG VGlAqraLDeA KYa ER FGk Q i f la usage_00027.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00028.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00029.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00030.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00031.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00042.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00043.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00044.pdb 61 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 119 usage_00045.pdb 58 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 116 usage_00046.pdb 46 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 104 usage_00072.pdb 58 MAMEVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00073.pdb 58 MAMEVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00074.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00075.pdb 58 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 116 usage_00076.pdb 58 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 116 usage_00077.pdb 57 MAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYSTE 116 usage_00090.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00091.pdb 58 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 116 usage_00092.pdb 46 MAMKVELARMSYQRAAWEVDSGR-RNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 104 usage_00101.pdb 61 MLIGIETARMYTYYAAWLADQGL-PHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVRE 119 usage_00106.pdb 58 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 116 usage_00107.pdb 61 MAMKVELARLSYQRAAWEIDSGR-RNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTE 119 Ma vE AR AAw D Gr n iAKa A ia A A q Gg G tE usage_00027.pdb 117 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYKN 153 usage_00028.pdb 117 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYK- 152 usage_00029.pdb 117 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY-- 151 usage_00030.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00031.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00042.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00043.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00044.pdb 120 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK- 155 usage_00045.pdb 117 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGR--- 150 usage_00046.pdb 105 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK- 140 usage_00072.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK- 152 usage_00073.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00074.pdb 117 YPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKY-- 151 usage_00075.pdb 117 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK- 152 usage_00076.pdb 117 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK- 152 usage_00077.pdb 117 YPVARFYRDAPTYYMVEGSANICKMIIALDQLG---- 149 usage_00090.pdb 117 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYKN 153 usage_00091.pdb 117 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYK- 152 usage_00092.pdb 105 YPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY-- 139 usage_00101.pdb 120 FPVEKLLRDVKLNQIYEGTNEIQRLIIARHIL----- 151 usage_00106.pdb 117 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRY-- 151 usage_00107.pdb 120 YPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRY-- 154 yPVekl RDak yqiy Gt Iqr I Ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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