################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:26 2021 # Report_file: c_1015_88.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00383.pdb # 2: usage_00390.pdb # 3: usage_00409.pdb # 4: usage_00744.pdb # # Length: 62 # Identity: 6/ 62 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 62 ( 17.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 62 ( 40.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00383.pdb 1 AGSKLC-EKT---SKTYSG---KCDN--KKCDKKCIEWEKA-QHGACHKREAGKESCFCY 50 usage_00390.pdb 1 ------KKV----YENYP-VSKCQLA--NQCNYDCKLDKHA-RSGECFYDEKRNLQCICD 46 usage_00409.pdb 1 ----C-KKV----YENYP-VSKCQLRIANQCNYDCKLDKHA-RSGECFYDEKRNLQCICD 49 usage_00744.pdb 1 ----------HNCVYEC------FDAFSSYCNGVCTKN--GAKSGYCQILGTYGNGCWCI 42 y Cn C a sG C e C C usage_00383.pdb 51 FD 52 usage_00390.pdb 47 Y- 47 usage_00409.pdb 50 YC 51 usage_00744.pdb 43 A- 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################