################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:46 2021 # Report_file: c_1477_112.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00012.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00054.pdb # 6: usage_00057.pdb # 7: usage_00062.pdb # 8: usage_00405.pdb # 9: usage_00406.pdb # 10: usage_00407.pdb # 11: usage_00430.pdb # 12: usage_00486.pdb # 13: usage_00728.pdb # 14: usage_01263.pdb # 15: usage_01264.pdb # # Length: 46 # Identity: 7/ 46 ( 15.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 46 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 46 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQ-- 43 usage_00018.pdb 1 YKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 46 usage_00019.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQM- 44 usage_00020.pdb 1 YKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 46 usage_00054.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 45 usage_00057.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 45 usage_00062.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 45 usage_00405.pdb 1 YKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQM- 45 usage_00406.pdb 1 YKSDFLKALS----VTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 42 usage_00407.pdb 1 YKSDFLKALSK----TEEECLEKIRLFLVNYTATIDVIYEMYTQMN 42 usage_00430.pdb 1 TREVFLEAMN-V--GPPEQAVQMLGEALPFIQRVYNVSQKLYAEHS 43 usage_00486.pdb 1 YKSDFLKALSK----TEEECLEKIRLFLVNYTATIDVIYEMYTQMN 42 usage_00728.pdb 1 YKSDFLKALSKGQNVTEEECLEKVRLFLVNYTATIDVIYEMYTRMN 46 usage_01263.pdb 1 YKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 46 usage_01264.pdb 1 -KSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMN 45 ksdFLkAls teEeclek rlfLvnytatidViyemYt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################