################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:10 2021 # Report_file: c_1408_106.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00226.pdb # 2: usage_00316.pdb # 3: usage_00833.pdb # # Length: 303 # Identity: 3/303 ( 1.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/303 ( 14.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 150/303 ( 49.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00226.pdb 1 ----------------------------MEKISENIMEELKKSGTNVDQIVERVKEASSQ 32 usage_00316.pdb 1 --QQAASLE----QTAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQT 54 usage_00833.pdb 1 IGILAKSIERLRRSLMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAASLEETAAS 60 a i s q v e usage_00226.pdb 33 IGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAG-------------------- 72 usage_00316.pdb 55 MRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAG-------------------- 94 usage_00833.pdb 61 MEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQKIADIISVI 120 m ia i i iA tnilAlna eaarag usage_00226.pdb ------------------------------------------------------------ usage_00316.pdb 95 --------------------------------------------EQGRGFAVVAGEVRNL 110 usage_00833.pdb 121 DGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQ-AAREIKSLIEDSVGK 179 usage_00226.pdb 73 ----E-AGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLENLEFMANLFETV 127 usage_00316.pdb 111 AQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQ 170 usage_00833.pdb 180 VDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQN 239 a e v v i e Ei rv ema usage_00226.pdb 128 GKTLQNMVRFMENNVKLLQEVRNS--------------LDTSKESLSEKSAEIDSATKVL 173 usage_00316.pdb 171 SRGIDQVGLAVAEMDRVTQQNAALVEQSAAAAAALEEQASRLTEAVAVFRI--------- 221 usage_00833.pdb 240 AALVEESAAAAAALEEQASRLTEA--------------VA-------------------- 265 a a q usage_00226.pdb 174 E-- 174 usage_00316.pdb 222 -QQ 223 usage_00833.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################