################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:20 2021 # Report_file: c_1221_88.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00029.pdb # 2: usage_00298.pdb # 3: usage_00339.pdb # 4: usage_01199.pdb # 5: usage_02016.pdb # 6: usage_02209.pdb # 7: usage_02461.pdb # 8: usage_02577.pdb # 9: usage_02578.pdb # # Length: 44 # Identity: 3/ 44 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 44 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 44 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 NAAILDESGKKF----AEPEEF--------DSDALREFVAFKKG 32 usage_00298.pdb 1 -GWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 40 usage_00339.pdb 1 TGWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 41 usage_01199.pdb 1 -GWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 40 usage_02016.pdb 1 -GWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 40 usage_02209.pdb 1 -GWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 40 usage_02461.pdb 1 TGWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 41 usage_02577.pdb 1 TGWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 41 usage_02578.pdb 1 -GWVEQANGKKIPFSLNLEMK-EGMSGSIRNEITYKSLENLG-- 40 gwveqanGKKi nlemk neitykslenlg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################