################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:50 2021 # Report_file: c_0377_16.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00127.pdb # 2: usage_00130.pdb # 3: usage_00131.pdb # # Length: 147 # Identity: 118/147 ( 80.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/147 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/147 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00127.pdb 1 PTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLVEKYSNDVT 60 usage_00130.pdb 1 PTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQ-PSWKGCVQTLVEKYSNDVT 59 usage_00131.pdb 1 PTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQ-PSWKGCVQTLVEKYSNDVT 59 PTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQ PSWKGCVQTLVEKYSNDVT usage_00127.pdb 61 SLPFLLEILTVLPEEVHSR-SLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKM 119 usage_00130.pdb 60 SLPFLLEILTVLPEEVHSR-SLRIGANRRTEIIEDLAFYSSTVVSLLT-CVE-------- 109 usage_00131.pdb 60 SLPFLLEILTVLPEEVHSRS--------RTEIIEDLAFYSSTVVSLLT-C---------- 100 SLPFLLEILTVLPEEVHSR RTEIIEDLAFYSSTVVSLLt C usage_00127.pdb 120 L--MKVFRCLGSWFNLGVLDSNFMANN 144 usage_00130.pdb 110 -EKLKVFRCLGSWFNLGVLDSNFANN- 134 usage_00131.pdb 101 --KLKVFRCLGSWFNLGVLDSNFANN- 124 lKVFRCLGSWFNLGVLDSNFanN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################