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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:55:59 2021
# Report_file: c_0083_35.html
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#====================================
# Aligned_structures: 3
#   1: usage_00131.pdb
#   2: usage_00219.pdb
#   3: usage_00220.pdb
#
# Length:        235
# Identity:        9/235 (  3.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    148/235 ( 63.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           87/235 ( 37.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00131.pdb         1  ILV------------FIELVNYYTKFLLEIRNQD-KYWALRHVKKILPVFAQLFEDTE-N   46
usage_00219.pdb         1  ---SAEDLVKALRSEIDPLKVAACRVIENS---QPKGLFA--TSNIIDILLDILFDEKVE   52
usage_00220.pdb         1  ---SAEDLVKALRSEIDPLKVAACRVIENS---QPKGLFA--TSNIIDILLDILFDEKVE   52
                                          idpLkvaacrviens   q Kglfa  tsnIidilldilfDek e

usage_00131.pdb        47  YPDVRAFSTNCLLQLFAEVSRIEEDE-YSLFKT--DKDSLK-------IGSEAKLITEWL   96
usage_00219.pdb        53  NDK----LITAIEKALERLSTDEL--IRRRLFDNNL-PYLVSVKGRMETV-SFVRLIDFL  104
usage_00220.pdb        53  NDK----LITAIEKALERLSTDEL--IRRRLFDNNL-PYLVSVKGRMETV-SFVRLIDFL  104
                           ndk    litaiekalerlStdEl   rrrlfd  l pyLv       tv sfvrlidfL

usage_00131.pdb        97  ELINPQYLVKY----HKDVVEN----YFHV-------SGYSI-GLRNLSA------DEEC  134
usage_00219.pdb       105  TIE--FQFIS-GPEFKDIIFCFTKEEILK-SVEDILVFIELVNYYTKFLLEIRNQDKYWA  160
usage_00220.pdb       105  TIE--FQFIS-GPEFKDIIFCFTKEEILK-SVEDILVFIELVNYYTKFLLEIRNQDKYWA  160
                           tie  fqfis     kdiifcf    ilk        fielv yytkfll      kywa

usage_00131.pdb       135  FNAIRNKFSAEIVLRLP------YLEQ--QVVETLTRYEYTSKFLLNEPKVGSLI  181
usage_00219.pdb       161  LRHVKKILP--VFAQLFEDTENYPDV-RAFSTNC---LLQLFAEVSRI-------  202
usage_00220.pdb       161  LRHVKKILP--VFAQLFEDTENYPDV-RAFSTNC---LLQLFAEVSRI-------  202
                           lrhvkkilp  vfaqLf      pdv   fstnc   llqlfaevsri       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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