################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:36 2021 # Report_file: c_1396_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01509.pdb # 2: usage_01510.pdb # 3: usage_01511.pdb # 4: usage_01512.pdb # 5: usage_01513.pdb # # Length: 165 # Identity: 13/165 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/165 ( 50.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/165 ( 35.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01509.pdb 1 KQEELKRLHRAQIIQRQLQQVEERQRRLEERGVAVEKALRPK------------------ 42 usage_01510.pdb 1 ----GHMKQEELKRLYKAQAIQRQLEEVEERQRASEIQGV--RLEKALRGEQDEAQLLQE 54 usage_01511.pdb 1 ---ELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKAL--------------------D 37 usage_01512.pdb 1 -QEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALR-------------------D 40 usage_01513.pdb 1 ---ELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALR-------------------D 38 lkrl aq iqrql veerqr E gv Ekal usage_01509.pdb 43 ----LQEWFKLVQEKNAV-RYES-ELIFARELELEDRQSRLQQELRER-AVEDHLKTEEE 95 usage_01510.pdb 55 WFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLREKMLKE-------ESQKDEKD 107 usage_01511.pdb 38 EAQLLQEWFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLREKMLKEESQKDEKD 97 usage_01512.pdb 41 EAQLLQEWFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLREKMLKEESQKDEKD 100 usage_01513.pdb 39 EAQLLQEWFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLREKMLKEESQKDEKD 98 lqEwfKLv ekn l ryes lli a eleLEd qsrl qkl esqKdEkd usage_01509.pdb 96 LSEEKQILNE-LEVVEQRDSLVALLEEQRLRE------------- 126 usage_01510.pdb 108 LNE------E-QEVFTELMQVIEQRDKLVDSLEEQRIREKAED-- 143 usage_01511.pdb 98 LNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHF------ 136 usage_01512.pdb 101 LNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHF----ES 141 usage_01513.pdb 99 LNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQ-------- 135 LnE E V eqrd lv leeqr re #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################