################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:20 2021 # Report_file: c_0657_22.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00236.pdb # 2: usage_00936.pdb # 3: usage_00937.pdb # 4: usage_00939.pdb # # Length: 78 # Identity: 2/ 78 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 78 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 78 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 QLLWNGT-KVVDKDGNDVTSANQ-NFI-SLAKFDQD----------SSK--YEFFN---L 42 usage_00936.pdb 1 -VLEVDPAEIP------------AKDGQDVTYKATFKVPVPGKDILAAPSSIEMVQKFDE 47 usage_00937.pdb 1 -VLEVDPAEIP------------AKDGQDVTYKATFKVPVPGKDILAAPSSIEMVQKFDE 47 usage_00939.pdb 1 PVLEVDPAEIP------------AKDGQDVTYKATFKVPVPGKDILAAPSSIEMVQKFDE 48 vLevdp eip kdg dvtykatf aap iEmvq e usage_00236.pdb 43 QTGETRGDYGYF-KV--- 56 usage_00936.pdb 48 -RLDYKEL----KV-ESG 59 usage_00937.pdb 48 -RLDYKEL----KV-ES- 58 usage_00939.pdb 49 -RLDYKEL----KV-ES- 59 rldykel v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################