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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:28:15 2021
# Report_file: c_0468_12.html
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#====================================
# Aligned_structures: 6
#   1: usage_00004.pdb
#   2: usage_00038.pdb
#   3: usage_00039.pdb
#   4: usage_00052.pdb
#   5: usage_00106.pdb
#   6: usage_00107.pdb
#
# Length:         85
# Identity:       25/ 85 ( 29.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     43/ 85 ( 50.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/ 85 (  7.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  GKLVVATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVKLEILSMSFDNVLTSLQ   60
usage_00038.pdb         1  --LVVATDTAFVPFEFKQG----DLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQ   54
usage_00039.pdb         1  --LVVATDTAFVPFEFKQG----DLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQ   54
usage_00052.pdb         1  --LVVATDTAFVPFEFKQG----DLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQ   54
usage_00106.pdb         1  --VVVGTDAAFAPFEYMQK----GKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQ   54
usage_00107.pdb         1  --VVVGTDAAFAPFEYMQK----GKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQ   54
                              VV Td af PFE  q        VGfDvDl  A  k   ldyElk          LQ

usage_00004.pdb        61  TGKADLAVAGISATDERKEVFDFSI   85
usage_00038.pdb        55  TKNVDLALAGITITDERKKAIDFSD   79
usage_00039.pdb        55  TKNVDLALAGITITDERKKAIDFSD   79
usage_00052.pdb        55  TKNVDLALAGITITDERKKAIDFSD   79
usage_00106.pdb        55  SKEVDMGISGITITDERKQSYDFSD   79
usage_00107.pdb        55  SKEVDMGISGITITDERKQSYDFSD   79
                            k vD    GItiTDERK   DFSd


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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