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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:07:46 2021
# Report_file: c_1113_12.html
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#====================================
# Aligned_structures: 4
#   1: usage_00075.pdb
#   2: usage_01029.pdb
#   3: usage_01030.pdb
#   4: usage_01031.pdb
#
# Length:         94
# Identity:       42/ 94 ( 44.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     86/ 94 ( 91.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            8/ 94 (  8.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00075.pdb         1  LVGYYVAKYTLNQIRQLKGYKEGVYVKVREGVEDNELLHECVQSVSVEDVLNEGTYLKAW   60
usage_01029.pdb         1  -VAYYIAKHTLNCIRQLSGYKDGSYVKVNNGVEDNSLLHNCIKDVSLDEVLDADKYVQAW   59
usage_01030.pdb         1  LVAYYIAKHTLNCIRQLSGYKDGSYVKVNNGVEDNSLLHNCIKDVSLDEVLDADKYVQAW   60
usage_01031.pdb         1  LVAYYIAKHTLNCIRQLSGYKDGSYVKVNNGVEDNSLLHNCIKDVSLDEVLDADKYVQAW   60
                            VaYYiAKhTLNcIRQLsGYKdGsYVKVnnGVEDNsLLHnCikdVSldeVLdadkYvqAW

usage_00075.pdb        61  EKIACSVFDAFGMPEEERRHAYDWLKSA------   88
usage_01029.pdb        60  NSIMANVYEAFQIKESDRK-DAERWFALAKENR-   91
usage_01030.pdb        61  NSIMANVYEAFQIKESDRK-DAERWFALAKEN--   91
usage_01031.pdb        61  NSIMANVYEAFQIKESDRK-DAERWFALAKENRL   93
                           nsImanVyeAFqikEsdRk daerwfal      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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