################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:18 2021 # Report_file: c_1158_16.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00501.pdb # 2: usage_00502.pdb # 3: usage_00503.pdb # 4: usage_00504.pdb # 5: usage_00505.pdb # 6: usage_01001.pdb # # Length: 52 # Identity: 14/ 52 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 52 ( 40.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 52 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00501.pdb 1 VKVVLDAEGYALYFSRATIPWDRDRFA-EG-L-ETVG-D-NFLRHLG----- 42 usage_00502.pdb 1 VKVVLDAEGYALYFSRATIPWDRDRFA--------VG-D-NFLRHLG----- 37 usage_00503.pdb 1 VKVLTDKDGYVLYFSRSVIPYDRDQFNLQDVQKVQLS-D-AYLRHIG----- 45 usage_00504.pdb 1 VKVLTDKDGYVLYFSRSVIPYDRDQFNLQDVQKVQLS-D-AYLRHIG----- 45 usage_00505.pdb 1 VKVLTDKDGYVLYFSRSVIPYDRDQF---------LS-D-AYLRHIG----- 36 usage_01001.pdb 1 VKVVVNTRQDALYFSRSPIPYPRNA------------EKARYLKHVGIYAYR 40 VKV d gy LYFSR IP dRd d LrH G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################