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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:09:25 2021
# Report_file: c_1135_110.html
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#====================================
# Aligned_structures: 4
#   1: usage_00217.pdb
#   2: usage_00334.pdb
#   3: usage_00335.pdb
#   4: usage_00336.pdb
#
# Length:         99
# Identity:        3/ 99 (  3.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     58/ 99 ( 58.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/ 99 ( 41.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00217.pdb         1  -SSNYFGELQFAFLNAMF--FGNYGSSLQWHAMIELICSSATVPKHM---------LDKL   48
usage_00334.pdb         1  SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELA-----------------------EM   37
usage_00335.pdb         1  -MDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASL----------QVTMQQAQKHTEM   49
usage_00336.pdb         1  -MDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASL----------QVTMQQAQKHTEM   49
                            mdsrlqrihaeikNslk  nldvnrciealdela                       em

usage_00217.pdb        49  DEILYYQIKTLPEQ----YSDILLNERVWNICL------   77
usage_00334.pdb        38  ITTLKKIRRF----KVSQVIMEK-STMLYNKFK------   65
usage_00335.pdb        50  ITTLKKIRRF----KVSQVIMEK-STMLYNKFKNMFLV-   82
usage_00336.pdb        50  ITTLKKIRRF----KVSQVIMEK-STMLYNKFKNMFLVG   83
                           ittLkkirrf        vimek stmlyNkfk      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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