################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:45 2021 # Report_file: c_0982_58.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00134.pdb # 2: usage_00135.pdb # 3: usage_00136.pdb # 4: usage_00137.pdb # 5: usage_00416.pdb # 6: usage_00881.pdb # # Length: 56 # Identity: 27/ 56 ( 48.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 56 ( 48.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 56 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 RKVFRRADGAPAAANSVERLS-LIAGR-YVGKDDPVLLVRAQSGLPAVGEVLEAFA 54 usage_00135.pdb 1 RKVFRRADGAPAAANSVER-LS------YVGKDDPVLLVRAQSGLPAVGEVLEAFA 49 usage_00136.pdb 1 -KVFRRADGAPAAANSVER-LS-----LYVGKDDPVLLVRAQSGLPAVGEVLEAFA 49 usage_00137.pdb 1 -KVFRRADGAPAAANSVER-LS-------VGKDDPVLLVRAQSGLPAVGEVLEA-- 45 usage_00416.pdb 1 -RVYRNEDNLLAAVVSIER-LNL----IYVGKDDPVMIVRLQHGLPALGEALEAFA 50 usage_00881.pdb 1 RRVYRNEDNLLAAVVSIERLN-LIAGK-YVGKDDPVMIVRLQHGLPALGEALEAFA 54 V R D AA S ER VGKDDPV VR Q GLPA GE LEA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################