################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:45:29 2021 # Report_file: c_1434_180.html ################################################################################################ #==================================== # Aligned_structures: 61 # 1: usage_00090.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00093.pdb # 5: usage_00314.pdb # 6: usage_00315.pdb # 7: usage_00469.pdb # 8: usage_00470.pdb # 9: usage_00657.pdb # 10: usage_00658.pdb # 11: usage_00659.pdb # 12: usage_00667.pdb # 13: usage_00668.pdb # 14: usage_00807.pdb # 15: usage_00808.pdb # 16: usage_00810.pdb # 17: usage_00811.pdb # 18: usage_00812.pdb # 19: usage_00813.pdb # 20: usage_00846.pdb # 21: usage_00847.pdb # 22: usage_00848.pdb # 23: usage_00849.pdb # 24: usage_00854.pdb # 25: usage_00855.pdb # 26: usage_00856.pdb # 27: usage_00858.pdb # 28: usage_00859.pdb # 29: usage_00860.pdb # 30: usage_00866.pdb # 31: usage_01086.pdb # 32: usage_01087.pdb # 33: usage_01163.pdb # 34: usage_01164.pdb # 35: usage_01171.pdb # 36: usage_01172.pdb # 37: usage_01191.pdb # 38: usage_01192.pdb # 39: usage_01194.pdb # 40: usage_01195.pdb # 41: usage_01196.pdb # 42: usage_01197.pdb # 43: usage_01198.pdb # 44: usage_01199.pdb # 45: usage_01435.pdb # 46: usage_01436.pdb # 47: usage_01720.pdb # 48: usage_01721.pdb # 49: usage_01722.pdb # 50: usage_01723.pdb # 51: usage_02613.pdb # 52: usage_02614.pdb # 53: usage_02857.pdb # 54: usage_02858.pdb # 55: usage_02928.pdb # 56: usage_03215.pdb # 57: usage_03216.pdb # 58: usage_03258.pdb # 59: usage_03259.pdb # 60: usage_03498.pdb # 61: usage_03600.pdb # # Length: 65 # Identity: 40/ 65 ( 61.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 65 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 65 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00091.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00092.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00093.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00314.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00315.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00469.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00470.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00657.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00658.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00659.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00667.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00668.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00807.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00808.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00810.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00811.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00812.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00813.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00846.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00847.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_00848.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00849.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00854.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00855.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00856.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00858.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00859.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00860.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_00866.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01086.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01087.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01163.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01164.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01171.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01172.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01191.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01192.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01194.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01195.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01196.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_01197.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01198.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01199.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01435.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLSFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01436.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLSFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_01720.pdb 1 IPIAAAG----NFSVGLLLFIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAA 56 usage_01721.pdb 1 IPIAAAG----NFSVGLLLFIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAA 56 usage_01722.pdb 1 IPIAAAG----NFSVGLLLFIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAA 56 usage_01723.pdb 1 IPIAAAG----NFSVGLLLFIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAA 56 usage_02613.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_02614.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_02857.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_02858.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_02928.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_03215.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_03216.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_03258.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_03259.pdb 1 ---LIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 57 usage_03498.pdb 1 GFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 60 usage_03600.pdb 1 -FNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVA 59 NFS G L FIF RV TTLL FSSGAPGGIFAPMLALGT LGTAFGM A usage_00090.pdb 61 VELF- 64 usage_00091.pdb 61 VELF- 64 usage_00092.pdb 61 VELF- 64 usage_00093.pdb 61 VELF- 64 usage_00314.pdb 61 VELF- 64 usage_00315.pdb 58 VELF- 61 usage_00469.pdb 61 VELF- 64 usage_00470.pdb 61 VELF- 64 usage_00657.pdb 58 VELF- 61 usage_00658.pdb 61 VELF- 64 usage_00659.pdb 61 VELF- 64 usage_00667.pdb 58 VELF- 61 usage_00668.pdb 58 VELF- 61 usage_00807.pdb 58 VELF- 61 usage_00808.pdb 61 VELF- 64 usage_00810.pdb 58 VEL-- 60 usage_00811.pdb 61 VELF- 64 usage_00812.pdb 61 VELF- 64 usage_00813.pdb 61 VELF- 64 usage_00846.pdb 58 VELF- 61 usage_00847.pdb 58 VEL-- 60 usage_00848.pdb 61 VELF- 64 usage_00849.pdb 61 VELF- 64 usage_00854.pdb 61 VELF- 64 usage_00855.pdb 61 VELF- 64 usage_00856.pdb 61 VEL-- 63 usage_00858.pdb 61 VELF- 64 usage_00859.pdb 61 VELF- 64 usage_00860.pdb 61 VELF- 64 usage_00866.pdb 61 VELF- 64 usage_01086.pdb 58 VELF- 61 usage_01087.pdb 58 VELF- 61 usage_01163.pdb 58 VELF- 61 usage_01164.pdb 58 VELF- 61 usage_01171.pdb 61 VEL-- 63 usage_01172.pdb 61 VELF- 64 usage_01191.pdb 61 VELF- 64 usage_01192.pdb 61 VELF- 64 usage_01194.pdb 61 VELF- 64 usage_01195.pdb 58 VELF- 61 usage_01196.pdb 58 VEL-- 60 usage_01197.pdb 61 VELF- 64 usage_01198.pdb 61 VELF- 64 usage_01199.pdb 61 VELF- 64 usage_01435.pdb 61 VELFP 65 usage_01436.pdb 61 VEL-- 63 usage_01720.pdb 57 AVLF- 60 usage_01721.pdb 57 AVLF- 60 usage_01722.pdb 57 AVLF- 60 usage_01723.pdb 57 AVLF- 60 usage_02613.pdb 58 VELF- 61 usage_02614.pdb 58 VELF- 61 usage_02857.pdb 61 VEL-- 63 usage_02858.pdb 61 VEL-- 63 usage_02928.pdb 61 VEL-- 63 usage_03215.pdb 58 VELF- 61 usage_03216.pdb 58 VELFP 62 usage_03258.pdb 58 VELFP 62 usage_03259.pdb 58 VELF- 61 usage_03498.pdb 61 VELF- 64 usage_03600.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################