################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:00 2021 # Report_file: c_1487_21.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_01027.pdb # 2: usage_01262.pdb # 3: usage_02002.pdb # 4: usage_02098.pdb # 5: usage_02360.pdb # 6: usage_02361.pdb # 7: usage_04109.pdb # 8: usage_04110.pdb # 9: usage_04111.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 53 ( 1.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 53 ( 58.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01027.pdb 1 ---------VVLQEEEAELREKIAMLAAIIGDERTMYNLMKK-ELREV----K 39 usage_01262.pdb 1 --------VVVLQEEEAELREKIAMLAAIIGDERTMYNLMKK-ELREVKKKFA 44 usage_02002.pdb 1 A----KLEEMEIRHEQDELSAKAAIIREQLENPESLKNLIIS-ELKEDAKK-- 46 usage_02098.pdb 1 ---------SLQELKAKLNENINSISAIDSL---SEEELFEPH-RKWADEAT- 39 usage_02360.pdb 1 QLYRL---TNTDVVVLQEEEAELREKIAMLAAI-------------------I 31 usage_02361.pdb 1 QLYRLT--NTDVVVLQEEEAELREKIAMLAAII-------------GD----E 34 usage_04109.pdb 1 --------VVVLQEEEAELREKIAMLAAIIGDERTMYNLMKK-ELREVKKKFA 44 usage_04110.pdb 1 --------VVVLQEEEAELREKIAMLAAIIGDERTMYNLMKK-ELREVKKKFA 44 usage_04111.pdb 1 ---------VVLQEEEAELREKIAMLAAIIGDERTMYNLMKK-ELREVKKKFA 43 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################