################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:08 2021 # Report_file: c_1429_112.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00040.pdb # 2: usage_01190.pdb # 3: usage_01191.pdb # 4: usage_01192.pdb # 5: usage_01193.pdb # # Length: 46 # Identity: 3/ 46 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 46 ( 67.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 46 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 -IKAAAKYYFN-KDLKDLNLAEEAYLAGLPQVPNNYN--------- 35 usage_01190.pdb 1 -LQALEKELVDRH-GEEV---TPEDVLSAAMYPDVFAHFKDFTAT- 40 usage_01191.pdb 1 -LQALEKELVDRH-GEEV---TPEDVLSAAMYPDVFAHFKDFTATF 41 usage_01192.pdb 1 DLQALEKELVDRH-GEEV---TPEDVLSAAMYPDVFAHFKDFTAT- 41 usage_01193.pdb 1 -LQALEKELVDRH-GEEV---TPEDVLSAAMYPDVFAHFKDFTAT- 40 lqAleKelvd h geev tpedvlsaamyPdvfa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################