################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:13 2021 # Report_file: c_0024_20.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00220.pdb # 2: usage_00221.pdb # 3: usage_00222.pdb # 4: usage_00223.pdb # 5: usage_00224.pdb # 6: usage_00242.pdb # 7: usage_00257.pdb # 8: usage_00311.pdb # 9: usage_00387.pdb # 10: usage_00388.pdb # 11: usage_00389.pdb # 12: usage_00473.pdb # 13: usage_00474.pdb # # Length: 254 # Identity: 63/254 ( 24.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 188/254 ( 74.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/254 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 ----------------------LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 38 usage_00221.pdb 1 ------------------RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 42 usage_00222.pdb 1 ------------------RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 42 usage_00223.pdb 1 ------------------RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 42 usage_00224.pdb 1 --------------------DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 40 usage_00242.pdb 1 ----------------------LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 38 usage_00257.pdb 1 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 60 usage_00311.pdb 1 ---------------------------------PKDVVDLAEIGAVLHEIDFALAHLDEW 27 usage_00387.pdb 1 --------------------DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 40 usage_00388.pdb 1 ----------------------LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 38 usage_00389.pdb 1 ----------------------LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 38 usage_00473.pdb 1 ------------------RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 42 usage_00474.pdb 1 ----------------------LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 38 PlaetrsvdIvtgadvleyyaglvpai usage_00220.pdb 39 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 94 usage_00221.pdb 43 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 98 usage_00222.pdb 43 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 98 usage_00223.pdb 43 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 98 usage_00224.pdb 41 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 96 usage_00242.pdb 39 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 94 usage_00257.pdb 61 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 116 usage_00311.pdb 28 VAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSE 87 usage_00387.pdb 41 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 96 usage_00388.pdb 39 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 94 usage_00389.pdb 39 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 94 usage_00473.pdb 43 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 98 usage_00474.pdb 39 E-GEQIPLR-E--TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 94 e geqiPlr e tSfvYtrrEPlGVvagIGawNYPVqiaLwksapAlaaGNamIfKPSE usage_00220.pdb 95 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 154 usage_00221.pdb 99 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 158 usage_00222.pdb 99 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 158 usage_00223.pdb 99 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 158 usage_00224.pdb 97 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 156 usage_00242.pdb 95 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 154 usage_00257.pdb 117 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 176 usage_00311.pdb 88 TTPETSAVIEKIIAEAF-APEYVAVIQGG-RDENSHLLSLP-FDFIFFTGSPNVGKVVMQ 144 usage_00387.pdb 97 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 156 usage_00388.pdb 95 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 154 usage_00389.pdb 95 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 154 usage_00473.pdb 99 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 158 usage_00474.pdb 95 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 154 vTPlTalklaeIytEAg pdgvfnVltGs RevgqwLtehP iekIsFTGgtstGKkVMa usage_00220.pdb 155 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 214 usage_00221.pdb 159 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVTNGTRVFIHRSQQA 218 usage_00222.pdb 159 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 218 usage_00223.pdb 159 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 218 usage_00224.pdb 157 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 216 usage_00242.pdb 155 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 214 usage_00257.pdb 177 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQ 236 usage_00311.pdb 145 AAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVK 203 usage_00387.pdb 157 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 216 usage_00388.pdb 155 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 214 usage_00389.pdb 155 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 214 usage_00473.pdb 159 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 218 usage_00474.pdb 155 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 214 sAs ssLkeVtmeLGGKsPLIifPDADLDraadiavmanFfsSGQv h sq usage_00220.pdb 215 ARFEAKVLERVQRI 228 usage_00221.pdb 219 RFEAKVLERVQRI- 231 usage_00222.pdb 219 ARFEAKVLERVQRI 232 usage_00223.pdb 219 ARFEAKVLERVQRI 232 usage_00224.pdb 217 ARFEAKVLERVQRI 230 usage_00242.pdb 215 ARFEAKVLERVQRI 228 usage_00257.pdb 237 ARFEAKVLERVQRI 250 usage_00311.pdb 204 D------------- 204 usage_00387.pdb 217 ARFEAKVLERVQRI 230 usage_00388.pdb 215 ARFEAKVLERVQRI 228 usage_00389.pdb 215 ARFEAKVLERVQRI 228 usage_00473.pdb 219 ARFEAKVLERVQRI 232 usage_00474.pdb 215 ARFEAKVLERVQRI 228 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################