################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:48 2021 # Report_file: c_0664_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00026.pdb # 2: usage_00103.pdb # 3: usage_00207.pdb # 4: usage_00280.pdb # 5: usage_00305.pdb # 6: usage_00309.pdb # 7: usage_00310.pdb # 8: usage_00408.pdb # 9: usage_00438.pdb # 10: usage_00471.pdb # 11: usage_00622.pdb # 12: usage_00625.pdb # 13: usage_00653.pdb # # Length: 84 # Identity: 25/ 84 ( 29.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 84 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 84 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00103.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPESLRLYSIAS 57 usage_00207.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00280.pdb 1 SVESLVGPKAPGETCHIVIDHG--GNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIAS 58 usage_00305.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00309.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQAIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00310.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYAIAS 57 usage_00408.pdb 1 SVESLVGPKAPGETCHIVIDHG--GNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIAS 58 usage_00438.pdb 1 LNTKITGDDAPGETWHMVFSTE--GEVPYREGQSIGIVPDGIDK--NGKPHKLRLYSIAS 56 usage_00471.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00622.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00625.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 usage_00653.pdb 1 SNEPLVKEGGIGIVQHIKFDLTGG-NLKYIEGQSIGIIPPGVDK--NGKPEKLRLYSIAS 57 s e lv G Hi d n Y EGQs G iPpG G P RLYsIAS usage_00026.pdb 58 TRHGDDVDDKTISLCVRQLEYKH- 80 usage_00103.pdb 58 TRHGDDVDDKTISLCVRQLE---- 77 usage_00207.pdb 58 TRHGDDVDDKTISLCVRQLE---- 77 usage_00280.pdb 59 TRYGDNFDGRTGSLCVRRAV---- 78 usage_00305.pdb 58 TRHGDDVDDKTISLCVRQLEYK-- 79 usage_00309.pdb 58 TRHGDDVDDKTISLCVRQLEYKHP 81 usage_00310.pdb 58 TRHGDDVDDKTISLCVRQLEYKH- 80 usage_00408.pdb 59 TRYGDNFDGRTGSLCVRRAV---- 78 usage_00438.pdb 57 SAIGDFGDSKTVSLCVKRLV---- 76 usage_00471.pdb 58 TRHGDDVDDKTISLCVRQLYFKHP 81 usage_00622.pdb 58 TRHGDDVDDKTISLCVRQLEYK-- 79 usage_00625.pdb 58 TRHGDDVDDKTISLCVRQLEYK-- 79 usage_00653.pdb 58 TRHGDDVDDKTISLCVRQLEYK-- 79 tr GD D T SLCVr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################