################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:53 2021 # Report_file: c_1379_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00087.pdb # 2: usage_00088.pdb # 3: usage_00089.pdb # 4: usage_00090.pdb # 5: usage_00133.pdb # 6: usage_00345.pdb # 7: usage_00451.pdb # 8: usage_00667.pdb # 9: usage_00709.pdb # # Length: 73 # Identity: 1/ 73 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 73 ( 9.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 73 ( 57.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 -----KADTL----TLKERERLKKRILDEIEEHSIKIYH------LPDA--EEDEDFKEQ 43 usage_00088.pdb 1 -----KADTL----TLKERERLKKRILDEIEEHSIKIYH------LPD-----AEDFKEQ 40 usage_00089.pdb 1 -----KADTL----TLKERERLKKRILDEIEEHSIKIYH------LPD-----DEDFKEQ 40 usage_00090.pdb 1 -----KADTL----TLKERERLKKRILDEIEEHSIKIYH------LPDA-------FKEQ 38 usage_00133.pdb 1 -----KADTL----TPEECQQFKKQIMKEIQEHKIKIYE------F-------------- 31 usage_00345.pdb 1 -----KSDSL----TRDELKLNKKLIMEDIDRWNLPIYN------FPFDEDEISDEDYET 45 usage_00451.pdb 1 -----KADTL----TLEERVHFKQRITADLLSNGIDVYPQKEFDE--------DSEDRLV 43 usage_00667.pdb 1 LTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNP----------------------- 37 usage_00709.pdb 1 -----KADTL----TLKERERLKKRILDEIEEHNIKIYH------LPD--------FKEQ 37 k d l t e K i usage_00087.pdb 44 TRLLKAS------ 50 usage_00088.pdb 41 TRLLKASI----- 48 usage_00089.pdb 41 TRLLKASI----- 48 usage_00090.pdb 39 TRLLKAS------ 45 usage_00133.pdb 32 VKKIKDRL----- 39 usage_00345.pdb 46 NMYLRTL------ 52 usage_00451.pdb 44 NEKFREMI----- 51 usage_00667.pdb 38 ----IQVVVDAIT 46 usage_00709.pdb 38 TRLLKASI----- 45 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################