################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:30:58 2021 # Report_file: c_0931_44.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00012.pdb # 2: usage_00058.pdb # 3: usage_00082.pdb # 4: usage_00083.pdb # 5: usage_00189.pdb # 6: usage_00191.pdb # 7: usage_00193.pdb # 8: usage_00194.pdb # 9: usage_00196.pdb # 10: usage_00197.pdb # 11: usage_00198.pdb # 12: usage_00201.pdb # 13: usage_00361.pdb # 14: usage_00394.pdb # 15: usage_00395.pdb # 16: usage_00408.pdb # 17: usage_00411.pdb # 18: usage_00519.pdb # 19: usage_00521.pdb # 20: usage_00586.pdb # 21: usage_00647.pdb # 22: usage_00648.pdb # 23: usage_00649.pdb # 24: usage_00664.pdb # 25: usage_00711.pdb # 26: usage_00728.pdb # 27: usage_00814.pdb # 28: usage_00815.pdb # 29: usage_00816.pdb # 30: usage_00936.pdb # 31: usage_00970.pdb # 32: usage_00971.pdb # 33: usage_00976.pdb # # Length: 47 # Identity: 5/ 47 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 47 ( 19.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 47 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -VHFVLS-QHKELKTVATDSHRLSQKKLTLEKN-SD----DFDVVIP 40 usage_00058.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00082.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00083.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00189.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00191.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00193.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00194.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00196.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00197.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00198.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00201.pdb 1 -MLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 39 usage_00361.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00394.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00395.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00408.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00411.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00519.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00521.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00586.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00647.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00648.pdb 1 -MLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 37 usage_00649.pdb 1 -MLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 39 usage_00664.pdb 1 -ILMQFDQKHQTLSVVGTDTKRLSYTQLEKISI-HS-TEEDISCILP 44 usage_00711.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00728.pdb 1 GMLLEVN-G-GTLRSVATDGHRLAMCSLDAQIPSQD----RHQVI-- 39 usage_00814.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00815.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00816.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 40 usage_00936.pdb 1 GMLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVI-- 38 usage_00970.pdb 1 -MLFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 39 usage_00971.pdb 1 --LFETE-G-EELRTVATDGHRLAVCSMPIGQS-LP----SHSVIVP 38 usage_00976.pdb 1 -VNWKVE-Q-SELLCTATDSHRLALRKAKLDIP-EDR---SYNVVIP 40 L vaTD hRL v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################