################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:43 2021 # Report_file: c_1069_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00067.pdb # 4: usage_00195.pdb # 5: usage_00270.pdb # 6: usage_00446.pdb # 7: usage_00562.pdb # 8: usage_00570.pdb # # Length: 46 # Identity: 3/ 46 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 46 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 46 ( 41.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 KL-----STIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYIL 40 usage_00052.pdb 1 KL-----STIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYI- 39 usage_00067.pdb 1 -L-----STIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYI- 38 usage_00195.pdb 1 AL-----PKVFDQ--THRLQLALVVDEYG-TVLGLVTLEDIFEHL- 37 usage_00270.pdb 1 -L-----PQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRY-- 38 usage_00446.pdb 1 --VPDVE-----ESAHRV--PAIVIDEYG-GTSGIITDKDVYEEL- 35 usage_00562.pdb 1 -------STIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYI- 37 usage_00570.pdb 1 KL-----STIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYI- 39 V d g G t D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################