################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:30 2021 # Report_file: c_0034_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00064.pdb # 2: usage_00124.pdb # 3: usage_00125.pdb # 4: usage_00126.pdb # 5: usage_00127.pdb # 6: usage_00128.pdb # 7: usage_00129.pdb # # Length: 236 # Identity: 220/236 ( 93.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 221/236 ( 93.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/236 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 -VALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 59 usage_00124.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 usage_00125.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 usage_00126.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 usage_00127.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 usage_00128.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 usage_00129.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS 60 VALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSS usage_00064.pdb 60 DESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVL 119 usage_00124.pdb 61 DESVAATLEHIQQHLGQPLIVVNNA-----MKDD-----EWFDVVNTNLNSLYRLSKAVL 110 usage_00125.pdb 61 DESVAATLEHIQQHLGQPLIVVNN-----RMKDD-----EWFDVVNTNLNSLYRLSKAVL 110 usage_00126.pdb 61 DESVAATLEHIQQHLGQPLIVVNNA----RMKDD-----EWFDVVNTNLNSLYRLSKAVL 111 usage_00127.pdb 61 DESVAATLEHIQQHLGQPLIVVNNA-G--RMKDD-----EWFDVVNTNLNSLYRLSKAVL 112 usage_00128.pdb 61 DESVAATLEHIQQHLGQPLIVVNNA-----GKDD-----EWFDVVNTNLNSLYRLSKAVL 110 usage_00129.pdb 61 DESVAATLEHIQQHLGQPLIVVNNA--------D-----EWFDVVNTNLNSLYRLSKAVL 107 DESVAATLEHIQQHLGQPLIVVNN d EWFDVVNTNLNSLYRLSKAVL usage_00064.pdb 120 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 179 usage_00124.pdb 111 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 170 usage_00125.pdb 111 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 170 usage_00126.pdb 112 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 171 usage_00127.pdb 113 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 172 usage_00128.pdb 111 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 170 usage_00129.pdb 108 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 167 RGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG usage_00064.pdb 180 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 235 usage_00124.pdb 171 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 226 usage_00125.pdb 171 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 226 usage_00126.pdb 172 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 227 usage_00127.pdb 173 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 228 usage_00128.pdb 171 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 226 usage_00129.pdb 168 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 223 FIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################