################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:13 2021 # Report_file: c_1485_90.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00019.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00175.pdb # 5: usage_00644.pdb # 6: usage_00645.pdb # 7: usage_01246.pdb # 8: usage_01247.pdb # 9: usage_01658.pdb # 10: usage_01978.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 38 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 38 ( 57.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -SQLAELVDAAAERLEVAD-----PVAAFKWRA----- 27 usage_00031.pdb 1 ----LARVE-ARGHVRRAG---GAARAADAVEAYLARA 30 usage_00032.pdb 1 ----LARVE-ARGHVRRAG---GAARAADAVEAYLARA 30 usage_00175.pdb 1 -TTAGKLAELHKRREESLHPVGEDAVEKVHAKG----- 32 usage_00644.pdb 1 -PA-LLARVEARGHVRRAG---GAARAADAVEAYLARA 33 usage_00645.pdb 1 -PALLARVE-ARGHVRRAG---GAARAADAVEAYLARA 33 usage_01246.pdb 1 RAALERVL-RMREHAARAG---GAARAADVLEAYLA-- 32 usage_01247.pdb 1 RAALERVL-RMREHAARAG---GAARAADVLEAYLA-- 32 usage_01658.pdb 1 -SP-ATMKTIRDGFA---------AAADAKVDELLQRG 27 usage_01978.pdb 1 -ARRLR---RIQAEMAQEG---GTRRAADLIEA----- 26 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################