################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:07 2021 # Report_file: c_0960_98.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00470.pdb # 2: usage_00561.pdb # 3: usage_00945.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 76 ( 34.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 76 ( 65.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00470.pdb 1 -SLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMR--------- 50 usage_00561.pdb 1 MKGILGTKIG----------------------MTQIWK--NDRAIPVTVVLAGPCPIVQR 36 usage_00945.pdb 1 MKGILGTKIG----------------------MTQIWK--NDRAIPVTVVLAGPCPIVQR 36 kgilgtkig mtqiwk ndraipvtvvl usage_00470.pdb ---------------- usage_00561.pdb 37 KTAQTDGYEAVQIGYA 52 usage_00945.pdb 37 KTAQTDGYEAVQIGYA 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################