################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:53:26 2021 # Report_file: c_0299_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00021.pdb # 2: usage_00034.pdb # 3: usage_00061.pdb # 4: usage_00248.pdb # 5: usage_00267.pdb # 6: usage_00327.pdb # 7: usage_00328.pdb # 8: usage_00329.pdb # # Length: 136 # Identity: 12/136 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/136 ( 33.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/136 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -GIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSR 59 usage_00034.pdb 1 -GSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEA 59 usage_00061.pdb 1 MEIVAPVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDA 59 usage_00248.pdb 1 -GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRR 59 usage_00267.pdb 1 -GSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRR 59 usage_00327.pdb 1 -GSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRR 59 usage_00328.pdb 1 -GSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRR 59 usage_00329.pdb 1 -GSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRR 59 g Tpf g d l g v GttGe L E v usage_00021.pdb 60 VRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYT 119 usage_00034.pdb 60 VVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNK--PSQEGIYQHFK 117 usage_00061.pdb 60 ATSAA-R--RVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPR-LSERQIAKYFR 115 usage_00248.pdb 60 VVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK--PTQEGMYQHFR 117 usage_00267.pdb 60 VVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK--PTQEGMYQHFR 117 usage_00327.pdb 60 VVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK--PTQEGMYQHFR 117 usage_00328.pdb 60 VVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK--PTQEGMYQHFR 117 usage_00329.pdb 60 VVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK--PTQEGMYQHFR 117 v viag g t ea al a GAda v PyY hf usage_00021.pdb 120 KVADLSPIPVVLYSVP 135 usage_00034.pdb 118 TIAEATSIPMIIYNVP 133 usage_00061.pdb 116 DLCSAVSIPVFLYN-- 129 usage_00248.pdb 118 HIAEAVAIPQILYN-- 131 usage_00267.pdb 118 HIAEAVAIPQILYN-- 131 usage_00327.pdb 118 HIAEAVAIPQILYN-- 131 usage_00328.pdb 118 HIAEAVAIPQILYN-- 131 usage_00329.pdb 118 HIAEAVAIPQILYN-- 131 a a IP lYn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################