################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:08 2021 # Report_file: c_1429_80.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00062.pdb # 2: usage_00171.pdb # 3: usage_00386.pdb # 4: usage_00487.pdb # 5: usage_00523.pdb # 6: usage_00536.pdb # 7: usage_00541.pdb # 8: usage_00563.pdb # 9: usage_00662.pdb # 10: usage_00721.pdb # 11: usage_00748.pdb # 12: usage_01006.pdb # 13: usage_01013.pdb # 14: usage_01405.pdb # 15: usage_01502.pdb # 16: usage_01516.pdb # 17: usage_01678.pdb # 18: usage_01697.pdb # 19: usage_01703.pdb # 20: usage_01705.pdb # 21: usage_01706.pdb # 22: usage_01746.pdb # # Length: 75 # Identity: 2/ 75 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 75 ( 25.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 75 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 43 usage_00171.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NLSASQVRNRLSSTATYLGSSF 42 usage_00386.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLQNTTTKLGDSF 43 usage_00487.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 43 usage_00523.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 43 usage_00536.pdb 1 ----------------PHVAGAAALILSKHP-------NLSASQVRNRLSSTATYLGSSF 37 usage_00541.pdb 1 ------------TMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 41 usage_00563.pdb 1 -------------MASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 40 usage_00662.pdb 1 ----------------PHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 37 usage_00721.pdb 1 -----------TAMATPHVAGAAALILSKHP-------TWTNAQVRDRLESTATYLGNSF 42 usage_00748.pdb 1 -------------MASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 40 usage_01006.pdb 1 G----------TSMATPHVAGAAALILSKHP-------TWTNAQVRDRLESTATYLGSSF 43 usage_01013.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 43 usage_01405.pdb 1 -------------MATPHVAGAAALILSKHP-------TWTNAQVRDRLESTATYLGNSF 40 usage_01502.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 43 usage_01516.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTATKLGDSF 42 usage_01678.pdb 1 -AEAEKMLGKVPFFVRKKVRKNTDNYAREIGEPVVTAD--VFRKAKEHLG---------- 47 usage_01697.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTKLGDSF 42 usage_01703.pdb 1 G----------TSMASPHVAGAAALILSKHP-------NWTNTQVRSSLENTTTYLGDSF 43 usage_01705.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NLSASQVRNRLSSTATYLGSSF 42 usage_01706.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NLSASQVRNRLSSTATYLGSSF 42 usage_01746.pdb 1 -----------TSMASPHVAGAAALILSKHP-------NLSASQVRNRLSSTATYLGSSF 42 phVagaaalilskhp qvr L usage_00062.pdb 44 YYGKGLINVQAAAQ- 57 usage_00171.pdb 43 YYGKGLINVEAAAQ- 56 usage_00386.pdb 44 YYGKGLINVQAAAQ- 57 usage_00487.pdb 44 YYGKGLINVQAAAQ- 57 usage_00523.pdb 44 YYGKGLINVQAAAQ- 57 usage_00536.pdb 38 YYGKGLINVEAAAQ- 51 usage_00541.pdb 42 YYGKGLINVEAAAQ- 55 usage_00563.pdb 41 YYGKGLINVQAAAQ- 54 usage_00662.pdb 38 YYGKGLINVQAAAQ- 51 usage_00721.pdb 43 YYGKGLINVQAAAQ- 56 usage_00748.pdb 41 YYGKGLINVQAAAQ- 54 usage_01006.pdb 44 YYGKGLINVQAAAQ- 57 usage_01013.pdb 44 YYGKGLINVQAAAQH 58 usage_01405.pdb 41 YYGKGLINVQAAAQ- 54 usage_01502.pdb 44 YYGKGLINVQAAAQ- 57 usage_01516.pdb 43 YYGKGLINVEAAAQ- 56 usage_01678.pdb --------------- usage_01697.pdb 43 YYGKGLINVQAAAQH 57 usage_01703.pdb 44 YYGKGLINVQAAAQ- 57 usage_01705.pdb 43 YYGKGLINVEAAAQ- 56 usage_01706.pdb 43 YYGKGLINVEAAAQ- 56 usage_01746.pdb 43 YYGKGLINVEAAAQ- 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################