################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:14 2021 # Report_file: c_1331_50.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00019.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00051.pdb # 5: usage_00052.pdb # 6: usage_00059.pdb # 7: usage_00069.pdb # 8: usage_00087.pdb # 9: usage_00088.pdb # 10: usage_00162.pdb # 11: usage_00163.pdb # 12: usage_00223.pdb # 13: usage_00419.pdb # 14: usage_00457.pdb # 15: usage_00517.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 54 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 54 ( 74.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00048.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00049.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00051.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00052.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00059.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00069.pdb 1 LRQIVKHDLT-------------QT-VY-------DIKYAKELEKESLKQN--- 30 usage_00087.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00088.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00162.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKSEAQAKKEK 38 usage_00163.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKSEAQAKKEK 38 usage_00223.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 usage_00419.pdb 1 ----S-ID--QLIKARGKVYFGVATDQNRLTT-GKNAAIIKA------------ 34 usage_00457.pdb 1 -MVNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 39 usage_00517.pdb 1 --VNEALV--RQG------LAKVAY-VY----KG-NNTHEQLLRKAEAQAKKEK 38 a vy n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################