################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:58 2021 # Report_file: c_0659_46.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00069.pdb # 2: usage_00076.pdb # 3: usage_00087.pdb # 4: usage_00088.pdb # 5: usage_00216.pdb # 6: usage_00312.pdb # 7: usage_00390.pdb # 8: usage_00392.pdb # 9: usage_00438.pdb # # Length: 65 # Identity: 3/ 65 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 65 ( 15.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 65 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 ---RVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRK--GS-PD-DVEFKSGAGTE 53 usage_00076.pdb 1 RFTAQLNK------ASQHVSLLIRDSQPSDSATYLCAVNDG--------GR-LTFGDGTT 45 usage_00087.pdb 1 RYTATLDA------DTKQSSLHITASQLSDSASYICVVSDR---GSTL-GR-LYFGRGTQ 49 usage_00088.pdb 1 RYTATLDA------DTKQSSLHITASQLSDSASYICVVSDR---GS-L-GR-LYFGRGTQ 48 usage_00216.pdb 1 HYTIQRDL-------DGTCSLHTTASTLDDDGNYTIMAANP--------QG--RVSCTGR 43 usage_00312.pdb 1 -YSATLDK------DAKHSTLHITATLLDDTATYICVVGDRG--SA-L-GR-LHFGAGTQ 48 usage_00390.pdb 1 RFSAVRPK-------GTNSTLKIQSAKQGDTATYLCASSSG-----V-GTE-VFFGKGTR 46 usage_00392.pdb 1 RFTAQLNK------ASQYVSLLIRDAQPSDSATYLCAVSGG---G--A-DG-LTFGKGTQ 47 usage_00438.pdb 1 -YSATLDK------DAKHSTLHITATLLDDTATYICVVGDRGS--A-L-GR-LHFGAGTQ 48 l i D Y c g gt usage_00069.pdb 54 LSVRA 58 usage_00076.pdb 46 LTVKP 50 usage_00087.pdb 50 LTVWP 54 usage_00088.pdb 49 LTVWP 53 usage_00216.pdb 44 LMVQ- 47 usage_00312.pdb 49 LIVIP 53 usage_00390.pdb 47 LTVVE 51 usage_00392.pdb 48 VVVTP 52 usage_00438.pdb 49 LIVIP 53 l V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################