################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:54 2021 # Report_file: c_1247_43.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00400.pdb # 2: usage_00437.pdb # 3: usage_00438.pdb # 4: usage_00439.pdb # 5: usage_00440.pdb # 6: usage_00441.pdb # 7: usage_00442.pdb # 8: usage_00460.pdb # 9: usage_00461.pdb # 10: usage_00462.pdb # 11: usage_00463.pdb # 12: usage_00464.pdb # 13: usage_00465.pdb # # Length: 49 # Identity: 15/ 49 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 49 ( 73.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 49 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00400.pdb 1 NIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELPK-PIDVQVITH- 47 usage_00437.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00438.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00439.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAPQ 38 usage_00440.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAPQ 38 usage_00441.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00442.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00460.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00461.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00462.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAPQ 38 usage_00463.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAPQ 38 usage_00464.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 usage_00465.pdb 1 NIVLSGGSTLFKGFGDRLLSEVKKLAP-----------KDVKIRISAP- 37 NIVLSGGSTlFkgFGdRLlsevKklap dvkirisap #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################