################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:11 2021 # Report_file: c_0004_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00184.pdb # 2: usage_00199.pdb # 3: usage_00200.pdb # 4: usage_00201.pdb # 5: usage_00202.pdb # # Length: 278 # Identity: 62/278 ( 22.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 236/278 ( 84.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/278 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00184.pdb 1 D-LPG-P--FHITMSPDGSTLFISNQSGHSVTFVDARTQKVTGEVAVRVQPEASAVTPDG 56 usage_00199.pdb 1 -ATIPVGSNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 59 usage_00200.pdb 1 -ATIPVGSNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 59 usage_00201.pdb 1 -ATIPVGSNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 59 usage_00202.pdb 1 -ATIPVGSNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 59 tip g pgaviSPDGtkvyvaNahsndVsiiDtaTnnViatVpagssPqgvAVsPDG usage_00184.pdb 57 AFLYVCNAESDSVSVVDIQRKQEIKEIKVGDWPSGIKISPDGKTAYVACSGCMWNAIDVI 116 usage_00199.pdb 60 KQVYVTN-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVI 116 usage_00200.pdb 60 KQVYVTN-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVI 116 usage_00201.pdb 60 KQVYVTN-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVI 116 usage_00202.pdb 60 KQVYVTN-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVI 116 kqvYVtN aSstlSViDttsntvagtvKtGksPlGlalSPDGKklYVtnnG dktvsVI usage_00184.pdb 117 DTGRMEKVRSIYTSDYGPRMVEISPDGKTLVAILDTVGSINRSVDFIDIASGRVVENRVI 176 usage_00199.pdb 117 NTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFD-----SSISVIDTVTNSVIDTVKV 170 usage_00200.pdb 117 NTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFD-----SSISVIDTVTNSVIDTVKV 170 usage_00201.pdb 117 NTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFD-----SSISVIDTVTNSVIDTVKV 170 usage_00202.pdb 117 NTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFD-----SSISVIDTVTNSVIDTVKV 170 nTvtkavintvsv grsPkgiavtPDGtkvyvanfd sSisvIDtvtnsVidtvkv usage_00184.pdb 177 HESSNLRDVVYTPDGKYIAVTHQTPKNWLPVCEAENGQVFT-NNVTIIETKAGG-KVARL 234 usage_00199.pdb 171 --EAAPSGIAVNPEGTKAYVTNVD---------------KYFNTVSI-DTGTNKITARIP 212 usage_00200.pdb 171 --EAAPSGIAVNPEGTKAYVTNVD---------------KYFNTVSI-DTGTNKITARIP 212 usage_00201.pdb 171 --EAAPSGIAVNPEGTKAYVTNVD---------------KYFNTVSI-DTGTNKITARIP 212 usage_00202.pdb 171 --EAAPSGIAVNPEGTKAYVTNVD---------------KYFNTVSI-DTGTNKITARIP 212 eaapsgiavnPeGtkayVTnvd ky NtVsI dTgtnk tarip usage_00184.pdb 235 PLDDLNNYDGNPYGMAMDPKGKYLYIGVRGMHRVTILD 272 usage_00199.pdb 213 V-------GPDPAGIAVTPDGKKVYVALSFNTVSV-ID 242 usage_00200.pdb 213 V-------GPDPAGIAVTPDGKKVYVALSFNTVSV-ID 242 usage_00201.pdb 213 V-------GPDPAGIAVTPDGKKVYVALSFNTVSV-ID 242 usage_00202.pdb 213 V-------GPDPAGIAVTPDGKKVYVALSFNTVSV-ID 242 v gpdPaGiAvtPdGKkvYvalsfntvsv iD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################