################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:22 2021 # Report_file: c_0212_21.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00039.pdb # 2: usage_00254.pdb # 3: usage_00269.pdb # # Length: 111 # Identity: 19/111 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/111 ( 80.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/111 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 --SLTFYPAWLTVSEGANATFTCSLSN-----WSEDLMLNWNRLS-PS-NQTEKQAAFSN 51 usage_00254.pdb 1 WRSLTFYPAWLTVSEGANATFTCSLSN-----WSEDLMLNWNRLS-PS-NQTEKQAAFSN 53 usage_00269.pdb 1 --MEVTVPATLNVLNGSDARLPCTFNSAYTVN-HKQFSLNWTYQEC-NNCSEEMFLQFRM 56 sltfyPAwLtVseGanAtftCslsn sedlmLNWnrls s nqtEkqaaFsn usage_00039.pdb 52 GLSQP-VQ--DARFQIIQ---LPNRHDFHMNILDTRRNDSGIYLCGAISLH 96 usage_00254.pdb 54 GLSQP-VQ--DARFQIIQ---LPNRHDFHMNILDTRRNDSGIYLCGAISL- 97 usage_00269.pdb 57 KIINLKLERFQDRVEFSGNPS---KYDVSVMLRNVQPEDEGIYNCYIMN-P 103 glsqp vq daRfqiiq rhDfhmnildtrrnDsGIYlCgais #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################