################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:29 2021 # Report_file: c_0994_12.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00166.pdb # 2: usage_00193.pdb # 3: usage_00214.pdb # 4: usage_00235.pdb # 5: usage_00256.pdb # 6: usage_00262.pdb # 7: usage_00263.pdb # 8: usage_00344.pdb # 9: usage_00345.pdb # 10: usage_00360.pdb # 11: usage_00361.pdb # 12: usage_00362.pdb # 13: usage_00435.pdb # 14: usage_00534.pdb # 15: usage_00651.pdb # 16: usage_00724.pdb # 17: usage_00745.pdb # 18: usage_00746.pdb # 19: usage_00747.pdb # 20: usage_01010.pdb # 21: usage_01082.pdb # # Length: 66 # Identity: 17/ 66 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 66 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 66 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_00193.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_00214.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPA 59 usage_00235.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRE----RWGPR 55 usage_00256.pdb 1 -TVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 58 usage_00262.pdb 1 ----SFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRG------GPR 49 usage_00263.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRG------GPR 53 usage_00344.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_00345.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_00360.pdb 1 ----SFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERAGPR 55 usage_00361.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERAGPR 59 usage_00362.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERAGPR 59 usage_00435.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGAVRKAERWGPR 59 usage_00534.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPA 59 usage_00651.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_00724.pdb 1 ----SLYSSKA-----D-IRFLNTAVKISSSLKPDELLVLLKDIELKIGR--------PR 42 usage_00745.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRK------R 53 usage_00746.pdb 1 ----SFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKA----PR 51 usage_00747.pdb 1 ----SFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 55 usage_01010.pdb 1 LTVSSFYRTPPLGPQDQ-PDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPR 59 usage_01082.pdb 1 ----SLYSSKA------VIRFLNTAVKISSSLKPDELLVLLKDIELKI-----------R 39 S Y LN AV SL P ELL IEL usage_00166.pdb 60 TLDLDI 65 usage_00193.pdb 60 TLDLDI 65 usage_00214.pdb 60 TLDLDI 65 usage_00235.pdb 56 TLDLDI 61 usage_00256.pdb 59 TLDLDI 64 usage_00262.pdb 50 TLDLDI 55 usage_00263.pdb 54 TLDLDI 59 usage_00344.pdb 60 TLALDI 65 usage_00345.pdb 60 TLDLAI 65 usage_00360.pdb 56 TLDLDI 61 usage_00361.pdb 60 TLDLDI 65 usage_00362.pdb 60 TLDLDI 65 usage_00435.pdb 60 TLDLDI 65 usage_00534.pdb 60 TLDLDI 65 usage_00651.pdb 60 TLDLDI 65 usage_00724.pdb 43 VIDLDI 48 usage_00745.pdb 54 TLDLDI 59 usage_00746.pdb 52 TLDLDI 57 usage_00747.pdb 56 TLDLDI 61 usage_01010.pdb 60 TLDLDI 65 usage_01082.pdb 40 VIDLDI 45 dLdI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################