################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:16 2021 # Report_file: c_1492_31.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00584.pdb # 2: usage_00585.pdb # 3: usage_00586.pdb # 4: usage_00587.pdb # 5: usage_00850.pdb # 6: usage_00851.pdb # 7: usage_02249.pdb # 8: usage_02250.pdb # # Length: 27 # Identity: 7/ 27 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 27 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 27 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00584.pdb 1 -TMMNVIMREIGKKLDELSREFYE-SV 25 usage_00585.pdb 1 ---MNVIMREIGKKLDELSREFYE-SV 23 usage_00586.pdb 1 -TMMNVIMREIGKKLDELSREFYE-SV 25 usage_00587.pdb 1 -TMMNVIMREIGKKLDELSREFYE-SV 25 usage_00850.pdb 1 -------GKELQKRSEELSRGFYELV- 19 usage_00851.pdb 1 -------KELQKR-SEELSRGFYE-LV 18 usage_02249.pdb 1 -TMMNVIMREIGKKLDELSREFYE-SV 25 usage_02250.pdb 1 GTMMNVIMREIGKKLDELSREFYE-SV 26 e k ELSR FYE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################