################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:10 2021 # Report_file: c_0500_7.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00053.pdb # 2: usage_00054.pdb # 3: usage_00055.pdb # 4: usage_00109.pdb # 5: usage_00110.pdb # 6: usage_00141.pdb # 7: usage_00142.pdb # 8: usage_00187.pdb # 9: usage_00243.pdb # 10: usage_00268.pdb # # Length: 106 # Identity: 25/106 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/106 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/106 ( 22.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00054.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00055.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00109.pdb 1 SDLVFKAYEIAKAKGLNVKAGNVFTSDTFYGDDPNAWKKWAEFGVLCVE-ETAQLYTTAA 59 usage_00110.pdb 1 SDLVFKAYEIAKAKGLNVKAGNVFTSDTFYGDDPNAWKKWAEFGVLCVE-ETAQLYTTAA 59 usage_00141.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00142.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00187.pdb 1 FKLLDKAYHIAKE-DITTHVGSVLSSDVFYSNQPDRN-ALGKLGVHAIE-EAAALYYLAA 57 usage_00243.pdb 1 FDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAA 60 usage_00268.pdb 1 FDLLRRAYEQAQSRG-PVHVGNVLSTDTFYHDQPNPYQLWAQFGVLAVE-EAAGLYTLAA 58 dL kAY g v GnV D FY GVl vE E LYt AA usage_00053.pdb 61 KYGVNALSVLTVSDHIFTG-EETTSEERQTTFNEMIEIALDAA--- 102 usage_00054.pdb 61 KYGVNALSVLTVSDHIF-------SEERQTTFNEMIEIALDAA--- 96 usage_00055.pdb 61 KYGVNALSVLTVSNHIFTG-EETTSEERQTTFNEMIEIALDAAIQ- 104 usage_00109.pdb 60 KLGVNALTLLTISDSFITH-EVTSAEERQTTFNE-IEVALETALQL 103 usage_00110.pdb 60 KLGVNALTLLTISDSFITH-EVTSAEERQTTFNE-IEVALETALQL 103 usage_00141.pdb 61 KYGVNALSVLTVSDHI------------QTTFNEMIEIALDA---- 90 usage_00142.pdb 61 KYGVNALSVLTVSDHIF-----------QTTFNEMIEIALDA---- 91 usage_00187.pdb 58 QHNVNALA--TISDNLNNPEEDTSAEERQTTFTD-K-VGLETLIS- 98 usage_00243.pdb 61 KYGVNALSVLTVSNHIFTG-EETTSEERQTTFNEMIEIALDAA--- 102 usage_00268.pdb 59 KFGVQALCILTISDHLITG-EKTTPQERQETFDQ-IEVALETI--- 99 k gVnAL T S QtTF i aL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################