################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:42 2021 # Report_file: c_0874_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00120.pdb # 4: usage_00127.pdb # 5: usage_00146.pdb # 6: usage_00215.pdb # 7: usage_00216.pdb # 8: usage_00231.pdb # # Length: 143 # Identity: 14/143 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/143 ( 16.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/143 ( 35.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 PDRRIQLCIVNLSII-------KT----YTKETMKDHFIEASKKESQLLLKKND------ 43 usage_00044.pdb 1 PDRRIQLCIVNLSII-------KT----YTKETMKDHFIEASKKESQLLLKKND------ 43 usage_00120.pdb 1 PPRRQQLCLYELFPI---IIKNEEGMEK-AKEELLETLQIVAEREAYYLWKQYNPTGKGI 56 usage_00127.pdb 1 PDRRIQLCIVNLAII-------KT----YTKETMKDHFIEASKKESQLLLKKND------ 43 usage_00146.pdb 1 PPRTQNLCVGELW-DRSNI---KN----DTKELLKEKIKNAIHKETELLYEYHDTG---- 48 usage_00215.pdb 1 PDRRIQLCIVNLAII-------KT----YTKETMKDHFIEASKKESQLLLKKND------ 43 usage_00216.pdb 1 PDRRIQLCIVNLAII-------KT----YTKETMKDHFIEASKKESQLLLKKND------ 43 usage_00231.pdb 1 PDRKIQLCIANFLNS-------RL----ETMEKFKEIFLISVNTEAKLLYNKNE------ 43 P R qLC l tkE k E lL usage_00043.pdb 44 ---NKYN----------SKFCNDLKNSFLDYGHLAMGNDMDFGGYSTKAENKIQEVFKGA 90 usage_00044.pdb 44 ---NKYN----------SKFCNDLKNSFLDYGHLAMGNDMDFG-YSTKAENKIQEVFK-- 87 usage_00120.pdb 57 DDA---N----------KKACCAIRGSFYDLEDIIKGNDLVHDEYTKYIDSKLNEIFG-- 101 usage_00127.pdb 44 ---NKYN----------SKFCNDLKNSFLDYGHLAMGNDMDFGGYSTKAENKIQEVFKGA 90 usage_00146.pdb 49 ---T-AIISKNDKNGLPKGFCHAVQRSFIDYKNMILGTSVNIYEHIGKLQEDIKKIIEKG 104 usage_00215.pdb 44 ---NKYN----------SKFCNDLKNSFLDYGHLAMGNDMDFGGYSTKAENKIQEVFKGA 90 usage_00216.pdb 44 ---NKYN----------SKFCNDLKNSFLDYGHLAMGNDMDFGGYSTKAENKIQEVFKGA 90 usage_00231.pdb 44 ---GKDP----------SIFCNELRNSFSDFRNSFIGDDMDFGGNTDRVKGYINKKFSDY 90 fC SF D G d i f usage_00043.pdb 91 -H-----HK--IKNFRKKWWNEF 105 usage_00044.pdb 88 ----ISEHK--IKNFRKKWWNEF 104 usage_00120.pdb 102 -SSDTNDID--TKRARTDWWE-- 119 usage_00127.pdb 91 HG-EISEHK--IKNFRKKWWNEF 110 usage_00146.pdb 105 TP-------QQSTENVNAWWKGI 120 usage_00215.pdb 91 HG-EISEHK--IKNFRKKWWNEF 110 usage_00216.pdb 91 HG-EISEHK--IKNFRKKWWNEF 110 usage_00231.pdb 91 YK-EKNVEK--LNNIKKEWWEK- 109 WW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################