################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:52:30 2021 # Report_file: c_0836_14.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00097.pdb # 2: usage_00126.pdb # 3: usage_00127.pdb # 4: usage_00156.pdb # 5: usage_00157.pdb # 6: usage_00158.pdb # 7: usage_00159.pdb # 8: usage_00266.pdb # 9: usage_00407.pdb # 10: usage_00408.pdb # 11: usage_00409.pdb # 12: usage_00439.pdb # 13: usage_00440.pdb # 14: usage_00441.pdb # 15: usage_00470.pdb # 16: usage_00484.pdb # 17: usage_00485.pdb # # Length: 65 # Identity: 43/ 65 ( 66.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 65 ( 66.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 65 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00126.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00127.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00156.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00157.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00158.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00159.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00266.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00407.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00408.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00409.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00439.pdb 1 IHTDVSYIACAAKLLAATDVVFPQFATHNAQTLAAIYHMAGKDFHVGKYEFQCLHGMGEP 60 usage_00440.pdb 1 IHTDVSYIACAAKLLAATDVVFPQFATHNAQTLAAIYH-------VGKYEFQCLHGMGEP 53 usage_00441.pdb 1 IHTDVSYIACAAKLLAATDVVFPQFATHNAQTLAAIYHMAGKDFHVGKYEFQCLHGMGEP 60 usage_00470.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00484.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 usage_00485.pdb 1 VYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEP 60 TDVSY ACA KLLA PQFATHNA TLAAIY G YEFQCLHGMGEP usage_00097.pdb 61 LYEQV 65 usage_00126.pdb 61 LYEQV 65 usage_00127.pdb 61 LYEQV 65 usage_00156.pdb 61 LYEQV 65 usage_00157.pdb 61 LYEQV 65 usage_00158.pdb 61 LYEQV 65 usage_00159.pdb 61 LYEQV 65 usage_00266.pdb 61 LYEQV 65 usage_00407.pdb 61 LYEQV 65 usage_00408.pdb 61 LYEQV 65 usage_00409.pdb 61 LYEQV 65 usage_00439.pdb 61 LYEEV 65 usage_00440.pdb 54 LYEEV 58 usage_00441.pdb 61 LYEEV 65 usage_00470.pdb 61 LYEQV 65 usage_00484.pdb 61 LYEQV 65 usage_00485.pdb 61 LYEQV 65 LYE V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################