################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:30 2021 # Report_file: c_1261_439.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00059.pdb # 2: usage_00066.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00414.pdb # 6: usage_01311.pdb # 7: usage_02267.pdb # 8: usage_03556.pdb # 9: usage_04322.pdb # 10: usage_04476.pdb # 11: usage_04477.pdb # 12: usage_04718.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 44 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 44 ( 43.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIE- 33 usage_00066.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIE- 33 usage_00068.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIE- 33 usage_00069.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIES 34 usage_00414.pdb 1 GKIVVIGS----ST-G---GPRSLDMIIPNLPKNFPAPIVVV-- 34 usage_01311.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIES 34 usage_02267.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIES 34 usage_03556.pdb 1 -RSVLVVG----GGTI---ATRRIKGFLQEG--A-AITV--V-- 29 usage_04322.pdb 1 -KNIVIVG----GGTA---GWMAASYLVRAL--QQQANITLIES 34 usage_04476.pdb 1 -HQIFTAGAGRSGL-M---AKSFAMRLMHMG--F-NAHI--V-- 32 usage_04477.pdb 1 -HQIFTAGAGRSGL-M---AKSFAMRLMHMG--F-NAHI--V-- 32 usage_04718.pdb 1 -NFVGTAT----AG-TDHV---DEAWLKQAG--I-GFSA--A-- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################