################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:50 2021 # Report_file: c_0011_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00009.pdb # 8: usage_00010.pdb # 9: usage_00011.pdb # 10: usage_00012.pdb # 11: usage_00013.pdb # 12: usage_00014.pdb # 13: usage_00015.pdb # # Length: 280 # Identity: 188/280 ( 67.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 188/280 ( 67.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/280 ( 8.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 APYVVHDLAIVGSSGAELGVRGHVTAYNVRTGEQAWRYYATGPDAEIGLADDFNSANPHY 60 usage_00002.pdb 1 APYVVHDLAIVGSSGAELGVRGHVTAYNVRTGEQAWRYYATGPDAEIGLADDFNSANPHY 60 usage_00003.pdb 1 APYVVHDLAIVGSSGAELGVRGHVTAYNVRTGEQAWRYYATGPDAEIGLADDFNSANPHY 60 usage_00006.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00007.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00008.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00009.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00010.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00011.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00012.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00013.pdb 1 APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 60 usage_00014.pdb 1 APYVIKDLVLVGSSGAELGVRGYVTAYDVKSGEMRWRAFATGPDEELLLAEDFNAPNPHY 60 usage_00015.pdb 1 APYVIKDLVLVGSSGAELGVRGYVTAYDVKSGEMRWRAFATGPDEELLLAEDFNAPNPHY 60 APYV D GSSGAELGVRG TAY V GE WR ATGPD LA DFN NPHY usage_00001.pdb 61 GQKGLGTATWEGDAWKIGGGTNWGWYAYDPAANLIYYGSGNPAPWNETMRPGDNKWTMTI 120 usage_00002.pdb 61 GQKGLGTATWEGDAWKIGGGTNWGWYAYDPAANLIYYGSGNPAPWNETMRPGDNKWTMTI 120 usage_00003.pdb 61 GQKGLGTATWEGDAWKIGGGTNWGWYAYDPAANLIYYGSGNPAPWNETMRPGDNKWTMTI 120 usage_00006.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00007.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00008.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00009.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00010.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00011.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00012.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00013.pdb 61 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 120 usage_00014.pdb 61 GQKNLGLETWEGDAWKIGGGTNWGWYAYDPEVDLFYYGSGNPAPWNETMRPGDNKWTMAI 120 usage_00015.pdb 61 GQKNLGLETWEGDAWKIGGGTNWGWYAYDPEVDLFYYGSGNPAPWNETMRPGDNKWTMAI 120 GQK LG TWEGDAWKIGGGTNWGWYAYDP L Y G GNPAPWNETMRPGDNKWTM I usage_00001.pdb 121 TARDADTGKMKFGYQKTPHDEWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDR 180 usage_00002.pdb 121 TARDADTGKMKFGYQKTPHDEWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDR 180 usage_00003.pdb 121 TARDADTGKMKFGYQKTPHDEWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDR 180 usage_00006.pdb 121 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00007.pdb 121 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00008.pdb 121 FGRDADTGEAKFGYQKTPHDEWEYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00009.pdb 121 FGRDADTGEAKFGYQKTPHDEWEYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00010.pdb 121 FGRDADTGEAKFGYQKTPHDEWEYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00011.pdb 121 FGRDADTGEAKFGYQKTPHDEWEYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00012.pdb 121 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00013.pdb 121 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 180 usage_00014.pdb 121 WGREATTGEAKFAYQKTPHDEWDYAGVNVMMLSEQEDKQGQMRKLLTHPDRNGIVYTLDR 180 usage_00015.pdb 121 WGREATTGEAKFAYQKTPHDEWDYAGVNVMMLSEQEDKQGQMRKLLTHPDRNGIVYTLDR 180 R A TG KF YQKTPHDEW AGVNV MLSEQ DK G RKLLTHPDRNGIVYTLDR usage_00001.pdb 181 ENGDLISADKLDDTVNVFKTVDLKTGLPVRDPEYGTRMDHKGTDICPSAMGYHNQGHDSY 240 usage_00002.pdb 181 ENGDLISADKLDDTVNVFKTVDLKTGLPVRDPEYGTRMDHKGTDICPSAMGYHNQGHDSY 240 usage_00003.pdb 181 ENGDLISADKLDDTVNVFKTVDLKTGLPVRDPEYGTRMDHKGTDICPSAMGYHNQGHDSY 240 usage_00006.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00007.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00008.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00009.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00010.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00011.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00012.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00013.pdb 181 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY 240 usage_00014.pdb 181 TNGDLISADKMDDTVNWVKEVQLDTGLPVRDPEFGTRMDHKARDICPSAMGYHNQGHDSY 240 usage_00015.pdb 181 TNGDLISADKMDDTVNWVKEVQLDTGLPVRDPEFGTRMDHKARDICPSAMGYHNQGHDSY 240 G L SA K DDTVN K V L TG PVRDPE GTRMDH DICPSAMGYHNQGHDSY usage_00001.pdb 241 DPQKQLFFMGINHICMDWEPFM------------------ 262 usage_00002.pdb 241 DPQKQLFFMGINHICMDWEPFM------------------ 262 usage_00003.pdb 241 DPQKQLFFMGINHICM------------------------ 256 usage_00006.pdb 241 DPKRELFFMGINHICM------------------------ 256 usage_00007.pdb 241 DPKRELFFMGINHICM------------------------ 256 usage_00008.pdb 241 DPKRELFFMGINHICMDWEPFMLPYRAGQFFVGATLNMYP 280 usage_00009.pdb 241 DPKRELFFMGINHICMDWEPFMLPYRAGQFFVGATLNMYP 280 usage_00010.pdb 241 DPKRELFFMGINHICMDWEPFMLPYRAGQFFVGATLNMYP 280 usage_00011.pdb 241 DPKRELFFMGINHICMDWEPFMLPYRAGQFFVGATLNMYP 280 usage_00012.pdb 241 DPKRELFFMGINHICM------------------------ 256 usage_00013.pdb 241 DPKRELFFMGINHICM------------------------ 256 usage_00014.pdb 241 DPERKVFMLGINHICMDWEPFMLPYRAGQFFVGATLTMYP 280 usage_00015.pdb 241 DPERKVFMLGINHICMDWEPFM------------------ 262 DP F GINHICM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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