################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:19:48 2021 # Report_file: c_1422_70.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00109.pdb # 2: usage_00302.pdb # 3: usage_00303.pdb # 4: usage_00304.pdb # 5: usage_00305.pdb # 6: usage_00306.pdb # 7: usage_00410.pdb # 8: usage_00544.pdb # 9: usage_00546.pdb # 10: usage_00672.pdb # 11: usage_00673.pdb # 12: usage_00699.pdb # 13: usage_00965.pdb # 14: usage_00966.pdb # 15: usage_01053.pdb # 16: usage_01054.pdb # 17: usage_01146.pdb # 18: usage_01150.pdb # 19: usage_01151.pdb # 20: usage_01214.pdb # # Length: 46 # Identity: 16/ 46 ( 34.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 46 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 46 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 43 usage_00302.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--- 40 usage_00303.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK---------- 33 usage_00304.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD----- 38 usage_00305.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--- 40 usage_00306.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--- 40 usage_00410.pdb 1 ----LAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 42 usage_00544.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK-- 41 usage_00546.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK-- 41 usage_00672.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA- 42 usage_00673.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL------ 37 usage_00699.pdb 1 -LL---AIIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR---- 38 usage_00965.pdb 1 ----LAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKN--- 39 usage_00966.pdb 1 ----LAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHV----- 37 usage_01053.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR---- 39 usage_01054.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK-- 41 usage_01146.pdb 1 ----LAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--- 39 usage_01150.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL------ 37 usage_01151.pdb 1 ---LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--- 40 usage_01214.pdb 1 G--LLAVCIQHEMDHLMGRVFVEYLSPLKQSRIKTKMKKLERA--- 41 QHE DHL G lF dYLSPLKQq K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################