################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:26 2021 # Report_file: c_1115_4.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00153.pdb # 2: usage_00163.pdb # 3: usage_01088.pdb # 4: usage_01089.pdb # # Length: 91 # Identity: 85/ 91 ( 93.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/ 91 ( 93.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 91 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00153.pdb 1 SFYEFMAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA- 59 usage_00163.pdb 1 SFYEFMAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA- 59 usage_01088.pdb 1 SFYEFMAMYKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQRTSLLLHRLFAR 60 usage_01089.pdb 1 SFYEFMAMYKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQRTSLLLHRLFAR 60 SFYEFMAMYKFMELAYNLFVMN R RSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA usage_00153.pdb 60 -MAFCDLNCWIAICAFAAQTRSAYQMIFMN- 88 usage_00163.pdb 60 -MAFCDLNCWIAICAFAAQTRSAYQMIFMN- 88 usage_01088.pdb 61 GMAFCDLNCWIAICAFAAQTRSAYQMIFMNP 91 usage_01089.pdb 61 GMAFCDLNCWIAICAFAAQTRSAYQMIFM-- 89 MAFCDLNCWIAICAFAAQTRSAYQMIFM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################