################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:03 2021 # Report_file: c_0303_11.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00047.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00102.pdb # # Length: 113 # Identity: 13/113 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/113 ( 28.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/113 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 ----DILYLEDDEVDIQSVERVFHKISSLIKIEIAKSGNQALDL-YGRN---KE-NKIH- 50 usage_00040.pdb 1 ---KVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQG---EYENSPR- 53 usage_00041.pdb 1 ---KVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQG---EYENSPR- 53 usage_00047.pdb 1 PELRPILLVEDNPRDLELTLTALEKCQLANEVVVARDGTEALDYLNVTG---SYHNRPGG 57 usage_00048.pdb 1 ---QPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPR- 56 usage_00049.pdb 1 ---KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEG---EYANASR- 53 usage_00102.pdb 1 ----HILLVEDSPTDVMITREAFDYYKLLNPLHVAGDGVAAMEFLRREG---QHSDAPR- 52 il vED D G A g usage_00013.pdb 51 -PKLILLDINIPK-NGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLN 101 usage_00040.pdb 54 -PNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELH 105 usage_00041.pdb 54 -PNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELH 105 usage_00047.pdb 58 DPAVVLLDLKLPKVDGLEVLQTVKGSDHLRHIPVVMLTSSRE--EQDLVRS-- 106 usage_00048.pdb 57 -PAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYS 108 usage_00049.pdb 54 -PDLILL-LNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLH 104 usage_00102.pdb 53 -PGLIILDLNLPKKSGREVLQELKADPDLMKIPVVVLTTSKS-EEDVARTY-- 101 P ilL lnlPk G EvL e k l IpVv lt s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################