################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:25:13 2021 # Report_file: c_0118_10.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00016.pdb # 2: usage_00056.pdb # 3: usage_00057.pdb # 4: usage_00095.pdb # 5: usage_00203.pdb # 6: usage_00236.pdb # 7: usage_00242.pdb # 8: usage_00243.pdb # 9: usage_00282.pdb # 10: usage_00290.pdb # 11: usage_00362.pdb # 12: usage_00363.pdb # 13: usage_00370.pdb # 14: usage_00371.pdb # 15: usage_00394.pdb # 16: usage_00424.pdb # 17: usage_00462.pdb # 18: usage_00494.pdb # 19: usage_00495.pdb # 20: usage_00547.pdb # # Length: 131 # Identity: 42/131 ( 32.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/131 ( 38.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/131 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 EVKLEESGGGLVQPGGSMKLSCVVSGLTFSRFWMSWVRQSPEKGLEWVAEIRLKSDNYAT 60 usage_00056.pdb 1 -VQLEESGGRLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKINNYST 59 usage_00057.pdb 1 -VQLEESGGRLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKINNYST 59 usage_00095.pdb 1 -VKVEESGGGLVQPGGSMKISCVVSGLTFSNYWMSWVRQSPEKGLEWVAEIRLKSDNYAT 59 usage_00203.pdb 1 EVQVVESGGGLVQPKGSLKLSCVVSGSTLNNYAMNWVRQAPGKGLEWVARIRSKSNNYAT 60 usage_00236.pdb 1 -VKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRSKVNNHAI 59 usage_00242.pdb 1 --QLVESGGGLVQPKESLKISCAAFGVTFSNVAMYWVRQAPGKGLEWVARIRTKPNNYAT 58 usage_00243.pdb 1 --QLVESGGGLVQPKESLKISCAAFGVTFSNVAMYWVRQAPGKGLEWVARIRTKPNNYAT 58 usage_00282.pdb 1 -VQLVESGGGLVQPKGSLKLSCAASGFTFNTYAMNWVRQAPGKGLEWVARIRSKSNNYAT 59 usage_00290.pdb 1 EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRSKVNNHAI 60 usage_00362.pdb 1 -VQLVESGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSNKYAT 59 usage_00363.pdb 1 -VQLVESGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSNKYAT 59 usage_00370.pdb 1 -VKVEESGGGLVQPGGSMKISCVVSGLTFSNYWMSWVRQSPEKGLEWVAEIRLKSDNYAT 59 usage_00371.pdb 1 -VKVEESGGGLVQPGGSMKISCVVSGLTFSNYWMSWVRQSPEKGLEWVAEIRLKSDNYAT 59 usage_00394.pdb 1 -VQLVESGGGLVQPKGSLKISCAASGFTFNIYAMNWVRQAPGKGLEWVARIRSQSNNYTT 59 usage_00424.pdb 1 -VQLVESGGGLVQPKGSLKISCAASGFTFNIYAMNWVRQAPGKGLEWVARIRSQSNNYTT 59 usage_00462.pdb 1 ---LVESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDAT 57 usage_00494.pdb 1 -VQLEESGGRLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKINNYST 59 usage_00495.pdb 1 -VQLEESGGRLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKINNYST 59 usage_00547.pdb 1 -MKLEESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAQIRLKSYNYAT 59 ESGG LVQP S K SC G m WVRQ p KGLEWVa Ir usage_00016.pdb 61 HYAESVKGKFTISRDDSKSRLYLQMNSLRTEDTGIYYCKIYF--------------YSFS 106 usage_00056.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRG--------------TT--Y 103 usage_00057.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRG--------------TT--Y 103 usage_00095.pdb 60 YYAESVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLP--------------MD--Y 103 usage_00203.pdb 61 YYADSVKDRFTISRDDSQSMIYLQMNNLKTEDTAMYYCVTYGNH-----------PF--A 107 usage_00236.pdb 60 HYAESVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGW--------------SF--L 103 usage_00242.pdb 59 YYADSVKGRFTISRDDSKSMVYLQMDNLKTEDTAMYYCTAE--------------VA--T 102 usage_00243.pdb 59 YYADSVKGRFTISRDDSKSMVYLQMDNLKTEDTAMYYCTAE--------------VA--T 102 usage_00282.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRHR--GAP-LYYGNGAWF--A 114 usage_00290.pdb 61 HYAESVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGW--------------SF--L 104 usage_00362.pdb 60 HYADSVKDRFTISRDDSQTMLYLQMNNLKTEDTAMYYCVREG--SY-YDSSY--GAM--D 112 usage_00363.pdb 60 HYADSVKDRFTISRDDSQTMLYLQMNNLKTEDTAMYYCVREG--SY-YDSSY--GAM--D 112 usage_00370.pdb 60 YYAESVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLP--------------MD--Y 103 usage_00371.pdb 60 YYAESVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLP--------------MD--Y 103 usage_00394.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRQ--------------MG--D 103 usage_00424.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRQ--------------MG--D 103 usage_00462.pdb 58 AYAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVI-------------------R 98 usage_00494.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRG--------------TT--Y 103 usage_00495.pdb 60 YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRG--------------TT--Y 103 usage_00547.pdb 60 HYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTPD--------------GS--D 103 YA Svk fT SRDDS yLQM L eDT YYC usage_00016.pdb 107 YWGQGTLVTVS 117 usage_00056.pdb 104 WGQGTLVTVS- 113 usage_00057.pdb 104 WGQGTLVTVS- 113 usage_00095.pdb 104 WGQGTSVTVS- 113 usage_00203.pdb 108 YWGQGTLVTVS 118 usage_00236.pdb 104 YWGQGTLVTVS 114 usage_00242.pdb 103 DWGQGVMVTVS 113 usage_00243.pdb 103 DWGQGVMVTVS 113 usage_00282.pdb 115 YWGQGTLVTVS 125 usage_00290.pdb 105 YWGQGTLVTVS 115 usage_00362.pdb 113 YWGQGTSVTVS 123 usage_00363.pdb 113 YWGQGTSVTVS 123 usage_00370.pdb 104 WGQGTSVTVS- 113 usage_00371.pdb 104 WGQGTSVTV-- 112 usage_00394.pdb 104 YWGQGTTLTVS 114 usage_00424.pdb 104 YWGQGTTLTVS 114 usage_00462.pdb 99 QWGQGTLVTV- 108 usage_00494.pdb 104 WGQGTLVTVS- 113 usage_00495.pdb 104 WGQGTLVTVS- 113 usage_00547.pdb 104 YWGQGTTLTV- 113 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################