################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:58 2021 # Report_file: c_1105_5.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00120.pdb # 2: usage_00123.pdb # 3: usage_00485.pdb # 4: usage_00487.pdb # 5: usage_00546.pdb # 6: usage_00706.pdb # 7: usage_00767.pdb # 8: usage_00975.pdb # # Length: 141 # Identity: 107/141 ( 75.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/141 ( 76.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/141 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 ---LIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 57 usage_00123.pdb 1 -SQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 59 usage_00485.pdb 1 -SQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 59 usage_00487.pdb 1 -SQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 59 usage_00546.pdb 1 --QLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 58 usage_00706.pdb 1 RSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 60 usage_00767.pdb 1 -SQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 59 usage_00975.pdb 1 -SQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL 59 LIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGL usage_00120.pdb 58 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEV 117 usage_00123.pdb 60 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEV 119 usage_00485.pdb 60 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEV 119 usage_00487.pdb 60 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQ--------KTRWQVITDASVEV 111 usage_00546.pdb 59 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQ--------KTRWQVITDASVE- 109 usage_00706.pdb 61 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEV 120 usage_00767.pdb 60 NANIMSLGGIAIAVGAMVAAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEV 119 usage_00975.pdb 60 NANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQ--------KTRWQVITDASVEV 111 NANIMSLGGIAIAVGAMVdAAIVMIENAHKRLEEWQHQ KTRWQVITDASVE usage_00120.pdb 118 GPALFISLLIITLSFIPIFTL 138 usage_00123.pdb --------------------- usage_00485.pdb 120 GPALFISLLIITLSFIPIFTL 140 usage_00487.pdb 112 GPALFISLLIITLS------- 125 usage_00546.pdb --------------------- usage_00706.pdb --------------------- usage_00767.pdb --------------------- usage_00975.pdb 112 GPALFISLLIITL-------- 124 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################