################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:56 2021 # Report_file: c_1256_446.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00245.pdb # 2: usage_00257.pdb # 3: usage_00740.pdb # 4: usage_00741.pdb # 5: usage_00742.pdb # 6: usage_00743.pdb # 7: usage_00780.pdb # 8: usage_00781.pdb # 9: usage_01298.pdb # # Length: 42 # Identity: 4/ 42 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 42 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 42 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00245.pdb 1 --IAAYTHAVA-D----NLEDLYTEIDEIRKKGYQHIRCQLG 35 usage_00257.pdb 1 --IPAYTHAVA-D----NLDDLYHEIDRFLAAGYRYIRCQLG 35 usage_00740.pdb 1 ---PAYSHASG-E----TLEALFASVDALIAQGYRHIRCQLG 34 usage_00741.pdb 1 ---PAYSHASG-E----TLEALFASVDALIAQGYRHIRCQLG 34 usage_00742.pdb 1 --IPAYSHASG-E----TLEALFASVDALIAQGYRHIRCQLG 35 usage_00743.pdb 1 --IPAYSHASG-E----TLEALFASVDALIAQGYRHIRCQLG 35 usage_00780.pdb 1 --IAAYTHAVA-D----NLEDLYTEIDEIRKKGYQHIRCQLG 35 usage_00781.pdb 1 --IAAYTHAVA-D----NLEDLYTEIDEIRKKGYQHIRCQLG 35 usage_01298.pdb 1 EEIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIG 42 aY ha l l d Gy IrcqlG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################