################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:18 2021 # Report_file: c_1370_142.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00213.pdb # 2: usage_01239.pdb # 3: usage_01240.pdb # 4: usage_01241.pdb # 5: usage_01242.pdb # 6: usage_01243.pdb # 7: usage_01244.pdb # 8: usage_01245.pdb # 9: usage_01246.pdb # 10: usage_01247.pdb # 11: usage_01248.pdb # 12: usage_01249.pdb # 13: usage_01250.pdb # 14: usage_01251.pdb # 15: usage_01252.pdb # # Length: 64 # Identity: 3/ 64 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 64 ( 43.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 64 ( 56.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00213.pdb 1 ETALLKRAKELFTNNDPKV-----------------IAQHVLSMDCRVARILGVSEEMRR 43 usage_01239.pdb 1 --KPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 47 usage_01240.pdb 1 --KPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 47 usage_01241.pdb 1 --KPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 47 usage_01242.pdb 1 --KPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 47 usage_01243.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR------------ 47 usage_01244.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 49 usage_01245.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR------------ 47 usage_01246.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR------------ 47 usage_01247.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 49 usage_01248.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 49 usage_01249.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR------------ 47 usage_01250.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 49 usage_01251.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYRAK---------- 49 usage_01252.pdb 1 FEKPNMAAMSG-RFFTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR------------ 47 kpnmaAmsg rfftred asavVrSaekyr usage_00213.pdb 44 NM-- 45 usage_01239.pdb 48 --V- 48 usage_01240.pdb 48 --V- 48 usage_01241.pdb 48 --V- 48 usage_01242.pdb 48 --V- 48 usage_01243.pdb ---- usage_01244.pdb 50 --V- 50 usage_01245.pdb ---- usage_01246.pdb ---- usage_01247.pdb 50 --V- 50 usage_01248.pdb 50 --V- 50 usage_01249.pdb ---- usage_01250.pdb 50 --V- 50 usage_01251.pdb 50 --VG 51 usage_01252.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################