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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:12:48 2021
# Report_file: c_0958_2.html
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#====================================
# Aligned_structures: 5
#   1: usage_00220.pdb
#   2: usage_01114.pdb
#   3: usage_01115.pdb
#   4: usage_01116.pdb
#   5: usage_01560.pdb
#
# Length:        105
# Identity:       19/105 ( 18.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     62/105 ( 59.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           36/105 ( 34.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00220.pdb         1  FHQGALLVAVLPEYVLGTIA------ENSHPPYATTQPGQVGAVLTHPYVLDAGIPLSQL   54
usage_01114.pdb         1  FHQGALLVAVLPEYVIGTVAGGT-GTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQL   59
usage_01115.pdb         1  FHQGALLVAVLPEYVIGTVAGGT-GTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQL   59
usage_01116.pdb         1  FHQGALLVAVLPEYVIGTVAG-GTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQL   59
usage_01560.pdb         1  ---GALILYMVPEA-----------------TTHA-IQT---------------ARDNAG   24
                              GALlvavlPEy                 py   qpg               ip sql

usage_00220.pdb        55  TVCPHQWINLRTNNCATIIVPYMNTVPFDSALNHCNFGLLVIPVV   99
usage_01114.pdb        60  TVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPIS  104
usage_01115.pdb        60  TVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPIS  104
usage_01116.pdb        60  TVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPIS  104
usage_01560.pdb        25  FVFPYVILNLYESNTATIEVPYISPTPNTSSGLHAPWTFYLQVLS   69
                           tVcPhqwiNLrtnNcATIiVPYin  PfdSalnHcnfgllv p s


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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