################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:59 2021 # Report_file: c_1079_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00045.pdb # 2: usage_00328.pdb # 3: usage_00391.pdb # 4: usage_00438.pdb # 5: usage_00439.pdb # 6: usage_00440.pdb # 7: usage_00441.pdb # 8: usage_00499.pdb # 9: usage_00500.pdb # 10: usage_00501.pdb # 11: usage_00502.pdb # 12: usage_00503.pdb # 13: usage_00649.pdb # # Length: 82 # Identity: 15/ 82 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 82 ( 46.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 82 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 SKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALES 60 usage_00328.pdb 1 ----------------ASMAKALLPIMNPGGSIVGMDFD-PSRAMPAYNWMTVAKSALES 43 usage_00391.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00438.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00439.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00440.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00441.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00499.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00500.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00501.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00502.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00503.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 usage_00649.pdb 1 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEA 60 a k lm GgSiv yl a YNvMgvAKa LE usage_00045.pdb 61 AVRYLAVDLGKHHIRVNALSAG 82 usage_00328.pdb 44 VNRFVAREAGKYGVRSNLVAAG 65 usage_00391.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00438.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00439.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00440.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00441.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00499.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00500.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00501.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00502.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00503.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 usage_00649.pdb 61 NVKYLALDLGPDNIRVNAISAG 82 v ylA dlG iRvNa sAG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################