################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:30:56 2021 # Report_file: c_0455_4.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00004.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00021.pdb # 7: usage_00022.pdb # 8: usage_00023.pdb # 9: usage_00034.pdb # 10: usage_00035.pdb # 11: usage_00046.pdb # 12: usage_00047.pdb # 13: usage_00048.pdb # 14: usage_00049.pdb # 15: usage_00053.pdb # 16: usage_00054.pdb # 17: usage_00055.pdb # 18: usage_00056.pdb # 19: usage_00057.pdb # 20: usage_00058.pdb # 21: usage_00062.pdb # 22: usage_00063.pdb # 23: usage_00086.pdb # 24: usage_00087.pdb # 25: usage_00089.pdb # 26: usage_00093.pdb # 27: usage_00094.pdb # # Length: 103 # Identity: 79/103 ( 76.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/103 ( 76.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/103 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 60 usage_00017.pdb 1 --LVVFCMATY----PTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00018.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00019.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00020.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00021.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00022.pdb 1 -SLVVFCMATY---DPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 56 usage_00023.pdb 1 --LVVFCMAT------TDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 52 usage_00034.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00035.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00046.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00047.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00048.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00049.pdb 1 -ALVVFCMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 59 usage_00053.pdb 1 --LVVFAMATYGEGDPTCNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00054.pdb 1 ------AMATYGEGDPTCNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00055.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00056.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00057.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00058.pdb 1 ------CMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 54 usage_00062.pdb 1 -SLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 59 usage_00063.pdb 1 -SLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 59 usage_00086.pdb 1 --LV-VFCMATYNGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 57 usage_00087.pdb 1 --SLVVFCMATYEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00089.pdb 1 --LVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVD 58 usage_00093.pdb 1 -ALVVFCMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 59 usage_00094.pdb 1 -ALVVFCMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVD 59 T NAQDFYDWLQETDVDL GVKFAVFGLGNKTYEHFNAMGKYVD usage_00004.pdb 61 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 101 usage_00017.pdb 55 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 96 usage_00018.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 100 usage_00019.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFG 101 usage_00020.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 99 usage_00021.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFG 101 usage_00022.pdb 57 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 98 usage_00023.pdb 53 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 94 usage_00034.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 100 usage_00035.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 99 usage_00046.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEH-- 95 usage_00047.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEH-- 95 usage_00048.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEH-- 95 usage_00049.pdb 60 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEH-- 100 usage_00053.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVAEFF- 100 usage_00054.pdb 55 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVAEFF- 96 usage_00055.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFG 97 usage_00056.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEH-- 95 usage_00057.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEH-- 95 usage_00058.pdb 55 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEH-- 95 usage_00062.pdb 60 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 100 usage_00063.pdb 60 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 100 usage_00086.pdb 58 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 99 usage_00087.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEF-- 99 usage_00089.pdb 59 QRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF- 100 usage_00093.pdb 60 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEH-- 100 usage_00094.pdb 60 KRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEH-- 100 RLEQLGAQRIFELGLGDDDGNLEEDFITWREQFW AV E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################