################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:31 2021 # Report_file: c_0322_5.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00012.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00072.pdb # 5: usage_00131.pdb # 6: usage_00150.pdb # 7: usage_00160.pdb # 8: usage_00163.pdb # 9: usage_00164.pdb # 10: usage_00170.pdb # # Length: 161 # Identity: 42/161 ( 26.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/161 ( 49.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/161 ( 29.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -------SREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVE 53 usage_00031.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00032.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00072.pdb 1 LPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVE 60 usage_00131.pdb 1 --GFDKLIREDQIALLKACSSEVMMFRMARRYDAETDSILFATNQPYTRESYTVAGMG-D 57 usage_00150.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00160.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00163.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00164.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 usage_00170.pdb 1 -------GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE 53 REDQIALLK s iE Mllet RRYn e ItFlkdf Y df AGlq e usage_00012.pdb 54 FINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVS 113 usage_00031.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00032.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00072.pdb 61 FINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVS 120 usage_00131.pdb 58 TVEDLLRFCRHMCAMKVDNAEYALLTAIVIFSE-RPSLSEGWKVEKIQEIYIEALKAYVE 116 usage_00150.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00160.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00163.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00164.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 usage_00170.pdb 54 FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTR 113 finpifeFsRaM l l dAE ALLiAI IFSa RPnvq VE lQ YvEAL Y usage_00012.pdb 114 INHPH---DPLMFPRMLMKLVSLRTLSSVHSEQVFALRLQD 151 usage_00031.pdb 114 IKRPQ---DQLRFPRMLMKLVSLRTLSSVHSEQ-------- 143 usage_00032.pdb 114 IKR-------------------------------------- 116 usage_00072.pdb 121 IHHPH---DRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQD 158 usage_00131.pdb 117 NRR--KPYATTIFAKLLSVLTELRTLGNMNSETCFSLKLKN 155 usage_00150.pdb 114 IKRPQ---DQLRFPRMLMKLVSLRTLSSVHS---------- 141 usage_00160.pdb 114 IKR-------------------------------------- 116 usage_00163.pdb 114 IKRPQ---DQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD 151 usage_00164.pdb 114 IKR-------------------------------------- 116 usage_00170.pdb 114 IKRPQ---DQLRFPRMLMKLVSLRTLSSVHS---------- 141 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################