################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:29 2021 # Report_file: c_0204_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00028.pdb # 8: usage_00029.pdb # 9: usage_00030.pdb # # Length: 214 # Identity: 32/214 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/214 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/214 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISY 60 usage_00003.pdb 1 TFEETAYFLWYGKLPTKSELEEFKRKMADYRELPAEALGILYHLPKNLHYIDVLKIFLSI 60 usage_00004.pdb 1 -YEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDTIYLMPKEADAIGLLEVGTAA 59 usage_00005.pdb 1 -YEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDTIYLMPKEADAIGLLEVGTAA 59 usage_00006.pdb 1 -YEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDTIYLMPKEADAIGLLEVGTAA 59 usage_00007.pdb 1 -YEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDTIYLMPKEADAIGLLEVGTAA 59 usage_00028.pdb 1 SYEELIHLMLYGELPNRQQLNQIKGIINESFEVPEQVISTIFSMPRNCDAIGMMETAFGI 60 usage_00029.pdb 1 SYEELIHLMLYGELPNRQQLNQIKGIINESFEVPEQVISTIFSMPRNCDAIGMMETAFGI 60 usage_00030.pdb 1 -FEEVSYLILYGKLPNREELNWFQEKLREERYLPDFIIKFLREVRKDAQPMDILRTAVSL 59 EE l yG LP L k P p usage_00001.pdb 61 LGNIDDSGDIP-VTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLY 119 usage_00003.pdb 61 H--------------EDLREKAIRVASVFPTILAYYYRYSKGKELIRPRKDLSHVENFYY 106 usage_00004.pdb 60 LASIDKN---F-KWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLL 115 usage_00005.pdb 60 LASIDKN---F-KWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLL 115 usage_00006.pdb 60 LASIDKN---F-KWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLL 115 usage_00007.pdb 60 LASIDKN---F-KWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLL 115 usage_00028.pdb 61 LASIYDP---K-WNRATNKELAVQIIAKTATITANIYRAKEGLKPKIPEPSESYAESFLA 116 usage_00029.pdb 61 LASIYDP---K-WNRATNKELAVQIIAKTATITANIYRAKEGLKPKIPEPSESYAESFLA 116 usage_00030.pdb 60 LGIEDSK---ND---ERTDIKGIKLISKFPTIVANYARLRKGLDIIEPDPKLSHSENFLY 113 l k T An yR G P S Fl usage_00001.pdb 120 MLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIH 179 usage_00003.pdb 107 MMFGE-RNE-KIRLLESAFILLMEQDINASTFAALVIASTLSDLYSCIVGALGALKGPLH 164 usage_00004.pdb 116 ASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLH 175 usage_00005.pdb 116 ASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLH 175 usage_00006.pdb 116 ASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLH 175 usage_00007.pdb 116 ASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLH 175 usage_00028.pdb 117 ATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPLH 176 usage_00029.pdb 117 ATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPLH 176 usage_00030.pdb 114 MLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVASTFSDLYSSIVAGISALKGPLH 173 p amd lIL he AST A lv STlSD YS a ALKGPlH usage_00001.pdb 180 ---GGAVEEAIKQFMEIGSPEKVEEWFFKALQQK 210 usage_00003.pdb 165 ---GGASEKVPPMLEEIGSEDRV----------- 184 usage_00004.pdb 176 ---GGAAEEAFKQFIEI--------G-------- 190 usage_00005.pdb 176 ---GGAAEEAFKQFIEI--------G-------- 190 usage_00006.pdb 176 ---GGAAEEAFKQFIEI--------G-------- 190 usage_00007.pdb 176 ---GGAAEEAFKQFIEI--------G-------- 190 usage_00028.pdb 177 ---GGAAEEAFKQFVEI--------G-------- 191 usage_00029.pdb 177 ---GGAAEEAFKQFVEI--------G-------- 191 usage_00030.pdb 174 GGANYEALKMFKEIG---SPEKVNDYILNRLSNK 204 gga e k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################