################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:51 2021 # Report_file: c_1255_179.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00093.pdb # 2: usage_00094.pdb # 3: usage_01051.pdb # 4: usage_01219.pdb # 5: usage_01734.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 34 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 34 ( 35.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 AMFRIPGLTEE-RRNALVDRLVEAGL-PA---FA 29 usage_00094.pdb 1 AMFRIPGLTEE-RRNALVDRLVEAGL-PA---FA 29 usage_01051.pdb 1 EMVHI--GSAT-QLRDAVSKHAPDAN-VLVMA-- 28 usage_01219.pdb 1 SCFFA--D-DISEDDPFLLYATLHSGNHCRFI-- 29 usage_01734.pdb 1 GII--YCLSRR-ECDTMADTLQRDGL-AA---LA 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################