################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:47 2021 # Report_file: c_1115_86.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00221.pdb # 2: usage_00222.pdb # 3: usage_00223.pdb # 4: usage_00224.pdb # 5: usage_00225.pdb # 6: usage_00649.pdb # 7: usage_00650.pdb # 8: usage_00651.pdb # 9: usage_00917.pdb # 10: usage_00918.pdb # 11: usage_01490.pdb # 12: usage_01491.pdb # # Length: 78 # Identity: 56/ 78 ( 71.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 78 ( 73.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 78 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00221.pdb 1 SRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDVLYELLQHIL 60 usage_00222.pdb 1 SRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDELYELLQHIL 60 usage_00223.pdb 1 SRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDVLYELLQHIL 60 usage_00224.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDELYELLQHIL 60 usage_00225.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDELYELLQHIL 60 usage_00649.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFE-NGKALLLLTKEDFRYRSPHSGDELYELLQHIL 59 usage_00650.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFE-NGKALLLLTKEDFRYRSPHSGDELYELLQHIL 59 usage_00651.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFE-NGKALLLLTKEDFRYRSPHSGDELYELLQHIL 59 usage_00917.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDRLYELLQHIL 60 usage_00918.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKDLLLLTKEDFRYRSPHSGDVLYELLQHIL 60 usage_01490.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDVLYELLQHIL 60 usage_01491.pdb 1 SRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPHSGDVLYELLQHIL 60 SRDDVAQWLKWAENEFSL PIDSNTFE NGKaLLLLTKEDFRYRSPHSGD LYELLQHIL usage_00221.pdb 61 KQRDLEAEAAAAEAAAKA 78 usage_00222.pdb 61 KQR--------------- 63 usage_00223.pdb 61 KQRDLEAEAAAAEAAAKA 78 usage_00224.pdb 61 K----------------- 61 usage_00225.pdb 61 K----------------- 61 usage_00649.pdb 60 K----------------- 60 usage_00650.pdb 60 KQ---------------- 61 usage_00651.pdb 60 KQRDHHHHH--------- 68 usage_00917.pdb 61 KQ---------------- 62 usage_00918.pdb 61 KQ---------------- 62 usage_01490.pdb 61 AQ---------------- 62 usage_01491.pdb 61 AQ---------------- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################