################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:45:26 2021 # Report_file: c_0296_8.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00117.pdb # 2: usage_00118.pdb # 3: usage_00119.pdb # 4: usage_00120.pdb # 5: usage_00121.pdb # 6: usage_00122.pdb # 7: usage_00123.pdb # 8: usage_00124.pdb # 9: usage_00154.pdb # 10: usage_00242.pdb # 11: usage_00290.pdb # 12: usage_00291.pdb # # Length: 133 # Identity: 31/133 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/133 ( 54.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/133 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 usage_00118.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 usage_00119.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 usage_00120.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 usage_00121.pdb 1 MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITG 60 usage_00122.pdb 1 MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITG 60 usage_00123.pdb 1 MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITG 60 usage_00124.pdb 1 MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITG 60 usage_00154.pdb 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60 usage_00242.pdb 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG 60 usage_00290.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 usage_00291.pdb 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60 MK tviGAGnVGaT Af a a E vl D eg pqGk lDm e p fdtk tG usage_00117.pdb 61 SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 usage_00118.pdb 61 SNDYADTANSDIVIITAGL---------DLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 111 usage_00119.pdb 61 SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 usage_00120.pdb 61 SNDYADTANSDIVIITAGL----------LLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 110 usage_00121.pdb 61 SNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 usage_00122.pdb 61 SNDYADTADSDIVIITAGL---------DLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 111 usage_00123.pdb 61 SNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 usage_00124.pdb 61 SNDYADTADSDIVIITAGL----------LLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 110 usage_00154.pdb 61 GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 usage_00242.pdb 61 TNDYGPTEDSDVCIITAGL-------RDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 113 usage_00290.pdb 61 SNDYADTANSDIVVITAGLPRKPGMT----LSMNAGIVREVTGRIMEHSKNPIIVVVSNP 116 usage_00291.pdb 61 SNDYADTANSDIVVITAGL----------LLSMNAGIVREVTGRIMEHSKNPIIVVVSNP 110 nDY t Sdi iTAGL l NagIv vt i s I VV NP usage_00117.pdb 121 LDIMTHVAWVR-- 131 usage_00118.pdb 112 LDIMTHVAWVR-- 122 usage_00119.pdb 121 LDIMTHVAWVR-- 131 usage_00120.pdb 111 LDIMTHVAWVR-- 121 usage_00121.pdb 121 LDIMTHVAWVR-- 131 usage_00122.pdb 112 LDIMTHVAWVRS- 123 usage_00123.pdb 121 LDIMTHVAWVRS- 132 usage_00124.pdb 111 LDIMTHVAWVRSG 123 usage_00154.pdb 121 MDVMTYIMWKE-- 131 usage_00242.pdb 114 LDVMTYVAYEA-- 124 usage_00290.pdb 117 LDIMTHVAWQKS- 128 usage_00291.pdb 111 LDIMTHVAWQKSG 123 lD MT vaw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################