################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:11 2021 # Report_file: c_0542_18.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00140.pdb # 2: usage_00141.pdb # 3: usage_00159.pdb # # Length: 174 # Identity: 36/174 ( 20.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 144/174 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/174 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00140.pdb 1 ------NPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDT-QK 53 usage_00141.pdb 1 SYKAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDT-QK 59 usage_00159.pdb 1 ------EPQLTALQDYLLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATP 54 nPyiievekrLyeciQsDsetInkaahhiLsSGGKrvRPmfvlLsgflndt qk usage_00140.pdb 54 DDLIRTAVSLELVHMASLVHDDYI------DNSDMRRGNTSVHIAFDKDTAIRTGHFLLA 107 usage_00141.pdb 60 DDLIRTAVSLELVHMASLVHDDYI------DNSDMRRGNTSVHIAFDKDTAIRTGHFLLA 113 usage_00159.pdb 55 AQLQAGAAAIEILHVGTLIHDDVIDDQMTY----------------GQRNAIYAGDFMFT 98 ddLirtAvslElvHmasLvHDDyI dkdtAIrtGhFlla usage_00140.pdb 108 RALQNIAT-INNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRK 160 usage_00141.pdb 114 RALQNIAT-INNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRK 166 usage_00159.pdb 99 VYFDQVLKSTTDRSLIQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGK 152 ralqniat innskfhQifsktilevcfGEfdQMadrfnypvsftAYLrrInrK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################