################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:20 2021 # Report_file: c_0173_35.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00377.pdb # 9: usage_00378.pdb # 10: usage_00380.pdb # 11: usage_00414.pdb # # Length: 127 # Identity: 17/127 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/127 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/127 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00029.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00030.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00031.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00032.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00033.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00034.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00377.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00378.pdb 1 QWVVI-SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT-DPAA 57 usage_00380.pdb 1 KTLLIING-AGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE--SLLN 57 usage_00414.pdb 1 HWVAI-SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG 59 wv I sG GGlG AvQyA AmGlRV d k l r Gaev n d usage_00028.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00029.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00030.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00031.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00032.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00033.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00034.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00377.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00378.pdb 58 WLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-GDFGTPIFDVVLKGI 114 usage_00380.pdb 58 QFKTQGIE-LVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE-NDQDLN--ALKPKSL 113 usage_00414.pdb 60 AVLK-ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSI 118 k i gahgV t vs a i Vr Gtial g p d v K i usage_00028.pdb 115 TIRGSIV 121 usage_00029.pdb 115 TIRGSIV 121 usage_00030.pdb 115 TIRGSIV 121 usage_00031.pdb 115 TIRGSIV 121 usage_00032.pdb 115 TIRGSIV 121 usage_00033.pdb 115 TIRGSIV 121 usage_00034.pdb 115 TIRGSIV 121 usage_00377.pdb 115 TIRGSIV 121 usage_00378.pdb 115 TIRGSIV 121 usage_00380.pdb 114 SFSH--- 117 usage_00414.pdb 119 SIVGSYV 125 i g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################