################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:55 2021 # Report_file: c_1200_490.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00843.pdb # 2: usage_00855.pdb # 3: usage_01729.pdb # 4: usage_03914.pdb # # Length: 66 # Identity: 1/ 66 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 66 ( 6.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 66 ( 71.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00843.pdb 1 -FNI---------YVSGIDT--------YGPIS---SVS---RSDVNILMTVNRDTKKIL 36 usage_00855.pdb 1 SFNI---------YVSGIDT--------YGPIS---SVS---RSDVNILMTVNRDTKKIL 37 usage_01729.pdb 1 ----VMVVI----NDRIGSARYITKTNAST-LDT--FRANEEGYLGVIIG---------- 39 usage_03914.pdb 1 ---------FSILLGVDTGSE-------HRK---SKWSG---NSDS-ILVTINPKTNKTT 37 sd Il usage_00843.pdb 37 LTTT-P 41 usage_00855.pdb 38 LTTT-P 42 usage_01729.pdb ------ usage_03914.pdb 38 TSLERD 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################