################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:01:28 2021 # Report_file: c_1369_66.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00101.pdb # 2: usage_00103.pdb # 3: usage_00104.pdb # 4: usage_00122.pdb # 5: usage_00178.pdb # 6: usage_00257.pdb # 7: usage_00295.pdb # 8: usage_00299.pdb # 9: usage_00301.pdb # 10: usage_00337.pdb # 11: usage_00371.pdb # 12: usage_00390.pdb # 13: usage_00393.pdb # 14: usage_00399.pdb # 15: usage_00439.pdb # 16: usage_00440.pdb # 17: usage_00444.pdb # 18: usage_00448.pdb # 19: usage_00462.pdb # 20: usage_00472.pdb # 21: usage_00473.pdb # 22: usage_00474.pdb # 23: usage_00666.pdb # 24: usage_00673.pdb # 25: usage_00674.pdb # 26: usage_00713.pdb # 27: usage_00748.pdb # 28: usage_00774.pdb # 29: usage_00775.pdb # 30: usage_00842.pdb # 31: usage_00887.pdb # 32: usage_00983.pdb # 33: usage_01091.pdb # 34: usage_01115.pdb # 35: usage_01120.pdb # 36: usage_01141.pdb # 37: usage_01206.pdb # 38: usage_01220.pdb # 39: usage_01239.pdb # 40: usage_01241.pdb # 41: usage_01260.pdb # 42: usage_01353.pdb # # Length: 51 # Identity: 29/ 51 ( 56.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 51 ( 56.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 51 ( 31.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00103.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00104.pdb 1 -----MPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCC--SLVNRRPCFSAL 44 usage_00122.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00178.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00257.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00295.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00299.pdb 1 --------------VVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 37 usage_00301.pdb 1 --------------VVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 37 usage_00337.pdb 1 PESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSAL 51 usage_00371.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00390.pdb 1 ----RMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSAL 47 usage_00393.pdb 1 PEAERLPCVEDYLSVVLNRLCVLHEKTPVSEKVTKCCSESLVDRRPCFSAL 51 usage_00399.pdb 1 -------------SVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 38 usage_00439.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00440.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00444.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00448.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00462.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00472.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00473.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00474.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00666.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00673.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00674.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00713.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00748.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_00774.pdb 1 PESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSAL 51 usage_00775.pdb 1 -----MPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSAL 46 usage_00842.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00887.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_00983.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_01091.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_01115.pdb 1 PESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSAL 51 usage_01120.pdb 1 PEAERLPCVEDYLSVVLNRLCVLHEKTPVSEKVTKCCSESLVDRRPCFSAL 51 usage_01141.pdb 1 ---------EDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 42 usage_01206.pdb 1 PEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 51 usage_01220.pdb 1 --------------VVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 37 usage_01239.pdb 1 ----RMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 47 usage_01241.pdb 1 --------------VVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 37 usage_01260.pdb 1 ------------LSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 39 usage_01353.pdb 1 -------------SVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSAL 38 LN LCVLHEKTPVS VTKCC SLV RRPCFSAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################