################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:51 2021 # Report_file: c_0875_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00095.pdb # 2: usage_00136.pdb # 3: usage_00137.pdb # 4: usage_00138.pdb # 5: usage_00342.pdb # 6: usage_00770.pdb # # Length: 224 # Identity: 5/224 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/224 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/224 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 --DSHDLQRFLSDFRDLSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTF 58 usage_00136.pdb 1 -MVHQFFRDMDDE---ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAI 56 usage_00137.pdb 1 --VHQFFRDMDDE---ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAI 55 usage_00138.pdb 1 --VHQFFRDMDDE---ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAI 55 usage_00342.pdb 1 NKQQNFNTGIKDF---DFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRL 57 usage_00770.pdb 1 ---DSTLRYLQDL---LAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 54 d W e lv s g Dl v l H l a usage_00095.pdb 59 QAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRR-LD-QCLELQLFHRDCE 116 usage_00136.pdb 57 QSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVE 116 usage_00137.pdb 56 QSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVE 115 usage_00138.pdb 56 QSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVE 115 usage_00342.pdb 58 KDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMD 117 usage_00770.pdb 55 ERARSDEG-Q--LSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKEL 111 l l l aR l f usage_00095.pdb 117 QAENW-AAREAFLDS-------VEA-----LI----KKHEDFDKAINVQEEKIAALQAFA 159 usage_00136.pdb 117 EEEAWINEKMTLV--ASEDYGDTLA-----AIQGLLKKHEAFETDFTVHKDRVNDVCANG 169 usage_00137.pdb 116 EEEAWINEKMTLV--ASEDYGDTLA-----AIQGLLKKHEAFETDFTVHKDRVNDVCANG 168 usage_00138.pdb 116 EEEAWINEKMTLV--ASEDYGDTLA-----AIQGLLKKHEAFETDFTVHKDRVNDVCANG 168 usage_00342.pdb 118 DEESWIKEKKLLV--SSEDYGRDLT-----GVQNLRKKHKRLEAELAAHEPAIQGVLDTG 170 usage_00770.pdb 112 MWLNEKEEEEVGF----DW------SDRNTNMTAKKESYSALMRELELKEKKIKELQNAG 161 e w e kkh g usage_00095.pdb 160 DQLIAAGHYAKGDISSRRNEVLDRWRRLKAQIE----------- 192 usage_00136.pdb 170 EDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS- 212 usage_00137.pdb 169 EDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA 212 usage_00138.pdb 169 EDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS- 211 usage_00342.pdb 171 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE---- 210 usage_00770.pdb 162 DRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLK---- 201 L i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################