################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:30 2021 # Report_file: c_0322_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00011.pdb # 2: usage_00103.pdb # 3: usage_00109.pdb # 4: usage_00130.pdb # 5: usage_00132.pdb # 6: usage_00136.pdb # 7: usage_00137.pdb # 8: usage_00165.pdb # 9: usage_00176.pdb # 10: usage_00177.pdb # # Length: 160 # Identity: 26/160 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 92/160 ( 57.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/160 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -VDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS 59 usage_00103.pdb 1 HVDDQMAVIQYSWMGLMVFAMGWRSFTNVNSAMLYFAPDLVF-NEYRMHKSR--MYSQCV 57 usage_00109.pdb 1 -VDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMS 59 usage_00130.pdb 1 KVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMS 60 usage_00132.pdb 1 -VADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVL 59 usage_00136.pdb 1 -VDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS 59 usage_00137.pdb 1 -VDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS 59 usage_00165.pdb 1 -VDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMS 59 usage_00176.pdb 1 KVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS 60 usage_00177.pdb 1 KVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS 60 VdDQM llQncWseLl dhiyRqv hgkeg i lvtg v l usage_00011.pdb 60 LAQELVVRLRSLQFDQREFVCLKFLVLFSS--DVKNLENLQLVEGVQEQVNAALLDYTVC 117 usage_00103.pdb 58 RMRHLSQEFGWLQITPQEFLCMKALLLFSIIP-VDGLKNQKFFDELRMNYIKELDRIIAC 116 usage_00109.pdb 60 HAQELVAKLRSLQFDQREFVCLKFLVLFSL--DVKNLENFQLVEGVQEQVNAALLDYTMC 117 usage_00130.pdb 61 HAQELVAKLRSLQFDQREFVCLKFLVLFSL--DVKNLENFQLVEGVQEQVNAALLDYTMC 118 usage_00132.pdb 60 RAQELVLQLLALQLDRQEFVCLKFIILFSL--DLKFLNNHILVKDAQEKANAALLDYTLC 117 usage_00136.pdb 60 LAQELVVRLRSLQFDQREFVCLKFLVLFSS--DVKNLENLQLVEGVQEQVNAALLDYTVC 117 usage_00137.pdb 60 LAQELVVRLRSLQFDQREFVCLKFLVLFSS--DVKNLENLQLVEGVQEQVNAALLDYTVC 117 usage_00165.pdb 60 HAQELVAKLRSLQFDQREFVCLKFLVLFSL--DVKNLENFQLVEGVQEQVNAALLDYTMC 117 usage_00176.pdb 61 LAQELVVRLRSLQFDQREFVCLKFLVLFSS--DVKNLENLQLVEGVQEQVNAALLDYTVC 118 usage_00177.pdb 61 LAQELVVRLRSLQFDQREFVCLKFLVLFSS--DVKNLENLQLVEGVQEQVNAALLDYTVC 118 aqeLv l LQ d EFvClKfl LFS vk L N lv qe naaLldyt C usage_00011.pdb 118 NYPQ--Q-TEKFGQLLLRLPELRAISKQAEDYLYYKHVNG 154 usage_00103.pdb 117 KRKNPTSCSRRFYQLTKLLDSVQPIARELHQFAFDLLIK- 155 usage_00109.pdb 118 NYPQ--Q-TEKFGQLLLRLPEIRAISMQAEEYLYYKHLNG 154 usage_00130.pdb 119 NYPQ--Q-TEKFGQLLLRLPEIRAISMQAEEYLYYKHLNG 155 usage_00132.pdb 118 HYPH--S-GDKFQQLLLCLVEVRALSMQAKEYLYHKHLGN 154 usage_00136.pdb 118 NYPQ--Q-TEKFGQLLLRLPEIRAISKQAEDYLYYKHV-- 152 usage_00137.pdb 118 NYPQ--Q-TEKFGQLLLRLPEIRAISKQAEDYLYYKHVNG 154 usage_00165.pdb 118 NYPQ--Q-TEKFGQLLLRLPEIRAISMQAEEYLYYKHLNG 154 usage_00176.pdb 119 NYPQ--Q-TEKFGQLLLRLPELRAISKQAEDYLYYKHVNG 155 usage_00177.pdb 119 NYPQ--Q-TEKFGQLLLRLPELRAISKQAEDYLYYKHVNG 155 yp kF QLll L e rais qa yly kh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################