################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:21:10 2021 # Report_file: c_1060_2.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00007.pdb # 3: usage_00014.pdb # 4: usage_00017.pdb # 5: usage_00024.pdb # 6: usage_00033.pdb # 7: usage_00040.pdb # 8: usage_00049.pdb # 9: usage_00066.pdb # 10: usage_00068.pdb # 11: usage_00084.pdb # 12: usage_00085.pdb # 13: usage_00118.pdb # 14: usage_00125.pdb # 15: usage_00127.pdb # 16: usage_00128.pdb # 17: usage_00129.pdb # 18: usage_00131.pdb # 19: usage_00132.pdb # 20: usage_00150.pdb # 21: usage_00155.pdb # 22: usage_00156.pdb # # Length: 50 # Identity: 6/ 50 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 50 ( 12.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 50 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PEDTAVYLCGETSL--------F-P---T-S-RGSHYDTWGQGTQVTVS 35 usage_00007.pdb 1 TNEDTAMYYCSRENHM---------Y---E-T----YFDVWGQGTTVTV- 32 usage_00014.pdb 1 RAEDTAVYYCSRW-----------------------AMDVWGQGTLVTVS 27 usage_00017.pdb 1 TSEDSAVYYCARMW-YY--G-T-------Y------YFDYWGQGTTLTVS 33 usage_00024.pdb 1 RVEDSGTYKCKAYRRCA----F-------N-TG---VGYKEGAGTVLTVK 35 usage_00033.pdb 1 RFDDTAVYYCARDRL-Y----D-G-S---S-W----RLDPWGQGTRVVVS 35 usage_00040.pdb 1 RAEDTAVYYCSRWGGD---------G---F-Y----AMDVWGQGTLVTVS 33 usage_00049.pdb 1 RTEDTAVYYCAKPWY------P-F-MAS-KGS----EFDYWGQGTLVTVS 37 usage_00066.pdb 1 -AEDTAVYYCAKVSYL-------S-T---A-S----SLDYWGQGTLVTV- 32 usage_00068.pdb 1 KNEDTATYFCARFLL--------------R-Q----YFDVWGAGTTVTVS 31 usage_00084.pdb 1 -AADTAVYYCASLPRG-------Q-L--VN-A----FFDNWGQGTLVTVA 34 usage_00085.pdb 1 -ASDTGKYFCTRLYLFE----GAQ-S---S-N----AFDLWGQGTMILVS 36 usage_00118.pdb 1 DPVDTATYYCARTLRVS----G-D-Y---V-R----DFDLWGRGTLVTV- 35 usage_00125.pdb 1 RTEDTAVYYCARDPD--------ILT---A-F----SFDYWGQGVLVTVS 34 usage_00127.pdb 1 TSEDSAVYYCARMW-YY----G-------T--Y---YFDYWGQGTTLTVS 33 usage_00128.pdb 1 -AEDTAVYYCAKYPHYY----G-S-S---H-W----YFDVWGQGTLVTV- 34 usage_00129.pdb 1 -AEDTAVYYCAKYPHYY----G-S-S---H-W----YFDVWGQGTLVTV- 34 usage_00131.pdb 1 RAEDTAVYYCAKYPYYY----G-T-S---H-W----YFDVWGQGTLVTVS 36 usage_00132.pdb 1 RAEDTAVYYCAKYPYYY----G-T-S---H-W----YFDVWGQGTLVTVS 36 usage_00150.pdb 1 RVEDSGTYKCQADYSPSCYS-Y-------P-SL---ESAVEGAGTVLTVK 38 usage_00155.pdb 1 -AADTAIYYCSRGLFQP---AT-L-T---S-Y----WFDVWGPGVPVTVS 36 usage_00156.pdb 1 RSEDTAVYYCASRDYDY------------A-GR---YFDYWGQGTLVTVS 34 D Y C G G V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################