################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:13 2021 # Report_file: c_0836_6.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00006.pdb # 2: usage_00062.pdb # 3: usage_00112.pdb # 4: usage_00137.pdb # 5: usage_00146.pdb # 6: usage_00153.pdb # 7: usage_00192.pdb # 8: usage_00299.pdb # 9: usage_00424.pdb # 10: usage_00458.pdb # 11: usage_00459.pdb # 12: usage_00489.pdb # 13: usage_00528.pdb # 14: usage_00542.pdb # # Length: 106 # Identity: 6/106 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/106 ( 17.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/106 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00062.pdb 1 --DNYLNALREASEL-FPVFVTEFGTE-TYTGDG-ANDFQMADRYIDLMAERKIGWTKWN 55 usage_00112.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00137.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00146.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00153.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00192.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00299.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00424.pdb 1 --QFLRDKANYALSKGAPIFVTEWGTS-DASGNG-GVFLDQSREWLKYLDSKTISWVNWN 56 usage_00458.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00459.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00489.pdb 1 DANTVRSNIDRVIDQDLALVIGEFGHRHT----DGDV---DEDTILSYSEETGTGWLAWS 53 usage_00528.pdb 1 -GQNLRDQVDYALDQGAAIFVSEWGTS-AATGDG-GVFLDEAQVWIDFMDERNLSWANWS 57 usage_00542.pdb 1 --QFLRDKANYALSKGAPIFVTEWGTS-DASGNG-GVFLDQSREWLKYLDSKTISWVNWN 56 r a fv E Gt g v W W usage_00006.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00062.pdb 56 YSDDF---RSGAVFQPGTC-ASGGPWSGSSLKASGQWVRSKLQS-- 95 usage_00112.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRESA 98 usage_00137.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00146.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00153.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00192.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00299.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00424.pdb 57 LSDKQ---ESSSALKPGASKTG-G-WRLSDLSASGTFVRENI---- 93 usage_00458.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00459.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00489.pdb 54 WKGNSTEWDYLDLSED---WAG-Q-----HLTDWGNRI-------- 82 usage_00528.pdb 58 LTHKD---ESSAALMPGANPTG-G-WTEAELSPSGTFVREKIRES- 97 usage_00542.pdb 57 LSDKQ---ESSSALKPGASKTG-G-WRLSDLSASGTFVRENILG-- 95 s p g g L sG v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################