################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:45:58 2021 # Report_file: c_0335_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00026.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00052.pdb # 8: usage_00054.pdb # 9: usage_00055.pdb # 10: usage_00066.pdb # 11: usage_00069.pdb # 12: usage_00073.pdb # # Length: 106 # Identity: 8/106 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/106 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/106 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLI--KT-G-WFTLLYEIRLKPEKAAEWEIHF----- 50 usage_00011.pdb 1 NLSVINSEE--LSSILKLTWTNPSI----K-S-VIILKYNIQYRTKDASTWSQIPPEDTA 52 usage_00026.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-GWF-TLLYEIRLKPEKAAEWEIHF----- 52 usage_00048.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 usage_00049.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 usage_00050.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 usage_00052.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 usage_00054.pdb 1 -LTLEVKQL--KKTYLWVKWSPPTITDVKT-G-WFTMEYEIRLKPEEAEEWEIHF----- 50 usage_00055.pdb 1 -LTLEVKQ---KKTYLWVKWSPPTITDVKT-G-WFTMEYEIRLKPE--EEWEIHF----- 47 usage_00066.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 usage_00069.pdb 1 -VVARPVPS--NPRRLEVTWQTPSTWPD--PE-SFPLKFFLRYRPLILDQWQHVE----- 49 usage_00073.pdb 1 -LAVEVKQPEDRKPYLWIKWSPPTLIDLKT-G-WFTLLYEIRLKPEKAAEWEIHF----- 52 l L W P y ir p W usage_00010.pdb 51 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 91 usage_00011.pdb 53 -STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYW-SDWSEEASGI-- 94 usage_00026.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQIP 95 usage_00048.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 93 usage_00049.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 93 usage_00050.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 93 usage_00052.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 93 usage_00054.pdb 51 TGHQTQFKVFDLYPGQKYLVQTRCKPDH--GYW-SRWSQESSVE-- 91 usage_00055.pdb 48 TGHQTQFKVFDLYPGQKYLVQTRCKPDH--GYW-SRWSQESSVE-- 88 usage_00066.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDH--GYW-SAWSPATFIQ-- 93 usage_00069.pdb 50 LSNGTAHTITDAYAGKEYIIQVAAKDNE--IGTWSDWSVAAHATPW 93 usage_00073.pdb 53 AGQQTEFKILSLHPGQKYLVQVRCKPDA--GYW-SAWSPATFIQ-- 93 t f l pg Y q rck gyw S WS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################