################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:03 2021 # Report_file: c_0512_29.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00102.pdb # 2: usage_00103.pdb # 3: usage_00524.pdb # 4: usage_00525.pdb # 5: usage_00526.pdb # 6: usage_00527.pdb # 7: usage_00529.pdb # 8: usage_00530.pdb # 9: usage_00540.pdb # 10: usage_00541.pdb # 11: usage_00835.pdb # 12: usage_00836.pdb # # Length: 91 # Identity: 49/ 91 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 91 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 91 ( 5.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 DPDGILASL-EGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHV 59 usage_00103.pdb 1 -PDGILASL-EGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHV 58 usage_00524.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00525.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00526.pdb 1 DVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 60 usage_00527.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00529.pdb 1 DVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 60 usage_00530.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00540.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00541.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00835.pdb 1 -VQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 59 usage_00836.pdb 1 DVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHV 60 I A EGL G GDAVIG NPV D R L K PTQ CVLAHV usage_00102.pdb 60 KTQ-EA-RRGAPTGLVFQSIAGSEKGNTAFG 88 usage_00103.pdb 59 KTQ-EA-RRGAPTGLVFQSIAGSEKGNTAFG 87 usage_00524.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00525.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00526.pdb 61 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 91 usage_00527.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00529.pdb 61 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 91 usage_00530.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEF- 89 usage_00540.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00541.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00835.pdb 60 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 90 usage_00836.pdb 61 TTQIEAIRRGAPGGLIFQSICGSEKGLKEFG 91 TQ EA RRGAP GL FQSI GSEKG F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################