################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:22:46 2021 # Report_file: c_0405_19.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00038.pdb # 2: usage_00171.pdb # 3: usage_00172.pdb # 4: usage_00180.pdb # 5: usage_00182.pdb # 6: usage_00270.pdb # 7: usage_00271.pdb # 8: usage_00272.pdb # 9: usage_00332.pdb # 10: usage_00334.pdb # 11: usage_00335.pdb # 12: usage_00336.pdb # 13: usage_00352.pdb # 14: usage_00353.pdb # 15: usage_00354.pdb # 16: usage_00355.pdb # 17: usage_00356.pdb # 18: usage_00357.pdb # 19: usage_00358.pdb # 20: usage_00359.pdb # 21: usage_00360.pdb # 22: usage_00361.pdb # 23: usage_00365.pdb # 24: usage_00366.pdb # 25: usage_00561.pdb # 26: usage_00562.pdb # # Length: 81 # Identity: 22/ 81 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 81 ( 53.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 81 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -NITVTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQ--GE 57 usage_00171.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGE------IDYGDILPSGDGTYQAWASIES------ 45 usage_00172.pdb 1 --TALFCKAHGFYPPEIYMTWMKNGE-----EIDYGDILPSGDGTYQAWASIEL------ 47 usage_00180.pdb 1 -ITTLYCRAYGFYPPEISINWMKNGEEIF-QDTDYGGILPSGDGTYQTWVSVELDPQN-- 56 usage_00182.pdb 1 --TALFCKAHGFYPPEIYMTWMKNGE-----EIDYGDILPSGDGTYQAWASIEL------ 47 usage_00270.pdb 1 ------CKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASI-------- 45 usage_00271.pdb 1 GVTALFCKAHGFYPPEIYMTWMKNGEEI---EIDYGDILPSGDGTYQAWASIE------- 50 usage_00272.pdb 1 ---ALFCKAHGFYPPEIYMTWMKN--------IDYGDILPSGDGTYQAWASIES------ 43 usage_00332.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIELDPQS-- 56 usage_00334.pdb 1 GVTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIEL------ 53 usage_00335.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIELDPQS-- 56 usage_00336.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIEL------ 52 usage_00352.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEEI---EIDYGDILPSGDGTYQAWASIES------ 50 usage_00353.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIEL------ 52 usage_00354.pdb 1 --TALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIEL------ 51 usage_00355.pdb 1 --TALFCKAHGFYPPEIYMTWMKNGEE---IEIDYGDILPSGDGTYQAWASIEL------ 49 usage_00356.pdb 1 --TALFCKAHGFYPPEIYMTWMKNGEE---QEIDYGDILPSGDGTYQAWASIEL------ 49 usage_00357.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGEE-----IDYGDILPSGDGTYQAWASIEL------ 46 usage_00358.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGEE-----IDYGDILPSGDGTYQAWASIELDP---- 48 usage_00359.pdb 1 ------CKAHGFYPPEIYMTWMKN------QEIDYGDILPSGDGTYQAWASI-------- 40 usage_00360.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGEEI--QEIDYGDILPSGDGTYQAWASIE------- 48 usage_00361.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGEE----EIDYGDILPSGDGTYQAWASIEL------ 47 usage_00365.pdb 1 GVTALFCKAHGFYPPEIYMTWMKNGEEIV-QEIDYGDILPSGDGTYQAWASIEL------ 53 usage_00366.pdb 1 ---ALFCKAHGFYPPEIYMTWMKN--------IDYGDILPSGDGTYQAWASIEL------ 43 usage_00561.pdb 1 ---ALFCKAHGFYPPEIYMTWMKNGEE-----IDYGDILPSGDGTYQAWASIELDPQS-- 50 usage_00562.pdb 1 -VTALFCKAHGFYPPEIYMTWMKNGEE----IIDYGDILPSGDGTYQAWASIEL------ 49 C A GFYPpeI Wmkn dyGdiLPsGdGTYQ W s usage_00038.pdb 58 EQ-RF-TCYMEHSGNHSTHP- 75 usage_00171.pdb 46 --NLY-SCHVEHSGVHMVLQ- 62 usage_00172.pdb 48 -SNLY-SCHVEHSGVHMVLQ- 65 usage_00180.pdb 57 -GDIY-SCHVEHGGVHMVLQ- 74 usage_00182.pdb 48 -SNLY-SCHVEHSGVHMVLQ- 65 usage_00270.pdb 46 -SNLY-SCHVEHSGVHMVLQ- 63 usage_00271.pdb 51 ---LY-SCHVEHSGVHMVLQ- 66 usage_00272.pdb 44 --NLY-SCHVEHSGVHMVLQ- 60 usage_00332.pdb 57 -SNLY-SCHVEHSGVHMVLQ- 74 usage_00334.pdb 54 ---LY-SCHVEHSGVHMVLQ- 69 usage_00335.pdb 57 -SNLY-SCHVEHSGVHMVLQ- 74 usage_00336.pdb 53 ----Y-SCHVEHSGVHMVLQ- 67 usage_00352.pdb 51 --NLY-SCHVEHSGVHMVLQ- 67 usage_00353.pdb 53 ---LY-SCHVEHSGVHMVLQV 69 usage_00354.pdb 52 ---LY-SCHVEHSGVHMVLQ- 67 usage_00355.pdb 50 ---LY-SCHVEHSGVHMVLQ- 65 usage_00356.pdb 50 ---LY-SCHVEHSGVHMVLQV 66 usage_00357.pdb 47 --NLY-SCHVEHSGVHMVLQ- 63 usage_00358.pdb 49 --NLY-SCHVEHSGVHMVLQ- 65 usage_00359.pdb 41 --NLY-SCHVEHSGVHMVLQ- 57 usage_00360.pdb 49 ---L-YSCHVEHSGVHMVLQ- 64 usage_00361.pdb 48 ---LY-SCHVEHSGVHMVLQ- 63 usage_00365.pdb 54 ---LY-SCHVEHSGVHMVLQ- 69 usage_00366.pdb 44 --NLY-SCHVEHSGVHMVLQ- 60 usage_00561.pdb 51 -SNLY-SCHVEHSGVHMVLQ- 68 usage_00562.pdb 50 ---LY-SCHVEHSGVHMVLQ- 65 sChvEHsGvHmvlq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################