################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:01 2021 # Report_file: c_0766_6.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00021.pdb # 7: usage_00022.pdb # 8: usage_00025.pdb # 9: usage_00026.pdb # 10: usage_00027.pdb # 11: usage_00028.pdb # 12: usage_00032.pdb # 13: usage_00033.pdb # 14: usage_00047.pdb # 15: usage_00048.pdb # 16: usage_00079.pdb # 17: usage_00080.pdb # 18: usage_00083.pdb # 19: usage_00110.pdb # # Length: 79 # Identity: 4/ 79 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 79 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 79 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 DAV--LAM---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 52 usage_00016.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00017.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00018.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00019.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00021.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00022.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00025.pdb 1 ----RLVA---YHDLALAPLKALY-FD-KSINVSLNLPIIRVSVDHGTAFDKAYKNAKIN 51 usage_00026.pdb 1 ----RLVA---YHDLALAPLKALY-FD-KSINVSLNLPIIRVSVDHGTAFDKAYKNAKIN 51 usage_00027.pdb 1 DLV--VAM---YHDQGHGPVKVLGLE--AGVNVTVGLEVIRTSVDHGTAFDIAGK-GVVD 52 usage_00028.pdb 1 DLV--VAM---YHDQGHGPVKVLGLE--AGVNVTVGLEVIRTSVDHGTAFDIAGK-GVVD 52 usage_00032.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00033.pdb 1 ---DAVLA---YHDQGLPVLKYQG-FG-RGVNITLGLPFIRTSVDHGTALELAGR-GKAD 51 usage_00047.pdb 1 ----DVVA---YHDQGHIPLKLLG---YDGVNITAGLPFIRTSADHGTAFDIAWT-GKAK 49 usage_00048.pdb 1 ----DVVA---YHDQGHIPLKLLG---FDGVNITAGLPFIRTSADHGTAFDIAWT-GKAK 49 usage_00079.pdb 1 ---DAVLA---YHDQGLPVLKYKG-FG-AAVNVTLGLPIIRTSVDHGTALDLAGS-GRID 51 usage_00080.pdb 1 ---DAVLA---YHDQGLPVLKYKG-FG-AAVNVTLGLPIIRTSVDHGTALDLAGS-GRID 51 usage_00083.pdb 1 DAV--LAM---YHDQGLPVLKYQG-FG-RAVNITLGLPFIRTSVDHGTALELAAT-GTAD 52 usage_00110.pdb 1 DVF--VAMYHDQGHIPVKLRAG---R--HSAALSIGAGVLFSSVGHGSGFDIAGT-LLAD 52 yhd k n l ir S dHGta A usage_00015.pdb 53 VGSFITALNLAIKMIVNTQ 71 usage_00016.pdb 52 VGSFITALNLAIKIVNT-- 68 usage_00017.pdb 52 VGSFITALNLAIKIVNTQ- 69 usage_00018.pdb 52 VGSFITALNLAIKIVNT-- 68 usage_00019.pdb 52 VGSFITALNLAIKIV---- 66 usage_00021.pdb 52 VGSFITALNLAIKIVNTQ- 69 usage_00022.pdb 52 VGSFITALNLAIKIV---- 66 usage_00025.pdb 52 TKSYFEAAKFAINL----- 65 usage_00026.pdb 52 TKSYFEAAKFAINL----- 65 usage_00027.pdb 53 EGSMLEALRQGAEL----- 66 usage_00028.pdb 53 EGSMLEALRQGAEL----- 66 usage_00032.pdb 52 VGSFITALNLAIKIVNTQ- 69 usage_00033.pdb 52 VGSFITALNLAIKIVN--- 67 usage_00047.pdb 50 SES-AVSIKLAQLA----- 62 usage_00048.pdb 50 SES-AVSIKLAQL------ 61 usage_00079.pdb 52 SGSLQVALETAYQAASR-- 68 usage_00080.pdb 52 SGSLQVALETAYQAASR-- 68 usage_00083.pdb 53 VGSFITALNLAIKMIN--- 68 usage_00110.pdb 53 PAPLLGAIRLVTTG----- 66 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################