################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:17 2021 # Report_file: c_1484_104.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00394.pdb # 2: usage_00395.pdb # 3: usage_00396.pdb # 4: usage_00397.pdb # 5: usage_00398.pdb # 6: usage_00399.pdb # 7: usage_00400.pdb # 8: usage_00401.pdb # 9: usage_00402.pdb # 10: usage_00403.pdb # 11: usage_00404.pdb # 12: usage_02269.pdb # 13: usage_02270.pdb # 14: usage_03042.pdb # 15: usage_03043.pdb # 16: usage_03045.pdb # 17: usage_03048.pdb # 18: usage_04417.pdb # # Length: 71 # Identity: 52/ 71 ( 73.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 71 ( 73.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 71 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00394.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 usage_00395.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 usage_00396.pdb 1 ---ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 57 usage_00397.pdb 1 ---ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 57 usage_00398.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 usage_00399.pdb 1 -----SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ--- 52 usage_00400.pdb 1 -----SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ--- 52 usage_00401.pdb 1 -----SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ--- 52 usage_00402.pdb 1 -----SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ--- 52 usage_00403.pdb 1 ---ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 57 usage_00404.pdb 1 ----LSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 56 usage_02269.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 usage_02270.pdb 1 ---ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 57 usage_03042.pdb 1 PGNELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 60 usage_03043.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 usage_03045.pdb 1 -GNELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 59 usage_03048.pdb 1 PGNELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 60 usage_04417.pdb 1 --NELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 58 SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ usage_00394.pdb ----------- usage_00395.pdb ----------- usage_00396.pdb ----------- usage_00397.pdb ----------- usage_00398.pdb ----------- usage_00399.pdb ----------- usage_00400.pdb ----------- usage_00401.pdb ----------- usage_00402.pdb ----------- usage_00403.pdb 58 KAFQAH----- 63 usage_00404.pdb 57 KAFQAHLHKLE 67 usage_02269.pdb 59 KAFQAHLHK-- 67 usage_02270.pdb 58 KA--------- 59 usage_03042.pdb 61 KAFQAH----- 66 usage_03043.pdb 59 K---------- 59 usage_03045.pdb ----------- usage_03048.pdb 61 KAFQ------- 64 usage_04417.pdb 59 KAFQAH----- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################