################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:10 2021 # Report_file: c_0631_2.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00025.pdb # 2: usage_00032.pdb # 3: usage_00034.pdb # 4: usage_00035.pdb # 5: usage_00040.pdb # 6: usage_00043.pdb # 7: usage_00052.pdb # 8: usage_00053.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00107.pdb # 14: usage_00108.pdb # 15: usage_00109.pdb # 16: usage_00113.pdb # 17: usage_00116.pdb # # Length: 89 # Identity: 53/ 89 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 89 ( 66.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 89 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 -YPVIRRTINLPTYTLETVYEPVFGQPAEKVYAEEIAEAWASG-EGLERVARYSMEDAKA 58 usage_00032.pdb 1 LYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWESG-EGLERVARYSMEDAKV 59 usage_00034.pdb 1 LYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWESG-EGLERVARYSMEDAKV 59 usage_00035.pdb 1 -YPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETG-ENLERVARYSMEDAKV 58 usage_00040.pdb 1 LYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWETG-EGLERVARYSMEDAKV 59 usage_00043.pdb 1 LYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWETG-EGLERVARYSMEDAKV 59 usage_00052.pdb 1 -YPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETG-ENLERVARYSMEDAKV 58 usage_00053.pdb 1 LYHVITRTINLPTYTLEAVYEAIFGKPKEKVYADEIAKAWESG-ENLERVAKYSMEDAKA 59 usage_00054.pdb 1 LYHVITRTINLPTYTLEAVYEAIFGKPKEKVYADEIAKAWESG-ENLERVAKYSMEDAKA 59 usage_00055.pdb 1 LYHVITRTINLPTYTLEAVYEAIFGKPKEKVYADEIAKAWESG-ENLERVAKYS-EDAKA 58 usage_00105.pdb 1 LFPVIRRTINLPTYTLEAVYEAIFGKSKEKVYAHEIAEAWETG-KGLERVAKYSMEDAKV 59 usage_00106.pdb 1 LFPVIRRTINLPTYTLEAVYEAIFGKSKEKVYAHEIAEAWETG-KGLERVAKYSMEDAKV 59 usage_00107.pdb 1 LFPVIRRTINLPTYTLEAVYEAIFGKSKEKVYAHEIAEAWETG-KGLERVAKYSMEDAKV 59 usage_00108.pdb 1 LFPVIRRTINLPTYTLEAVYEAIFGKSKEKVYAHEIAEAWETG-KGLERVAKYSMEDAKV 59 usage_00109.pdb 1 LFPVIRRTINLPTYTLEAVYEAIFGKSKEKVYAHEIAEAWETG-KGLERVAKYSMEDAKV 59 usage_00113.pdb 1 LYPVIRRTINLPTYTLETVYEPVFGQPKEKV-YAEEIARAWESGEGLERVARYSMEDAKA 59 usage_00116.pdb 1 -YPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWETG-EGLERVARYSMEDAKV 58 VI RTINLPTYTLE VYE FG kEKV a Ei aw g LERVA YS EDAK usage_00025.pdb 59 TYELGKEFFPMEAQLSRLVGQSLWDVSRS 87 usage_00032.pdb 60 TYELGREFFPMEAQLSRLIGQSLWDVSRS 88 usage_00034.pdb 60 TYELGREFFPMEAQLSRLIGQSLWDVSRS 88 usage_00035.pdb 59 TYELGKEFLPMEAQLSRLIGQSLWDVSRS 87 usage_00040.pdb 60 TYELGKEFFPMEAQLSRLVGQSLWDVSRS 88 usage_00043.pdb 60 TYELGKEFFPMEAQLSRLVGQSLWDVSRS 88 usage_00052.pdb 59 TYELGKEFLPMEAQLSRLIGQSLWDVSRS 87 usage_00053.pdb 60 TYELGKEFLPMEIQLSRLIGQPLWDVSRS 88 usage_00054.pdb 60 TYELGKEFLPMEIQLSRLIGQPLWDVSRS 88 usage_00055.pdb 59 TYELGKEFLP-EIQLSRLVGQPLWDVSRS 86 usage_00105.pdb 60 TFELGKEFFPMEAQLARLVGQPVWDVSRS 88 usage_00106.pdb 60 TFELGKEFFPMEAQLARLVGQPVWDVSRS 88 usage_00107.pdb 60 TFELGKEFFPMEAQLARLVGQPVWDVSRS 88 usage_00108.pdb 60 TFELGKEFFPMEAQLARLVGQPVWDVSRS 88 usage_00109.pdb 60 TFELGKEFFPMEAQLARLVGQPVWDVSRS 88 usage_00113.pdb 60 TYELGKEFFPMEAQLSRLVGQSLWDVSRS 88 usage_00116.pdb 59 TYELGKEFFPMEAQLSRLVGQSLWDVSRS 87 T ELG EF P E QL RL GQ WDVSRS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################