################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:51 2021 # Report_file: c_1256_475.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01239.pdb # 2: usage_01737.pdb # 3: usage_02461.pdb # 4: usage_02971.pdb # 5: usage_03606.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 47 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 47 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01239.pdb 1 LVASIYS-------N----DDAHLGRLALELADSHG-R-V-HA-ISP 32 usage_01737.pdb 1 SMILY-GYGNGVLPSNALQLHLIGVQMAQAIDRVKWSSNKDYI-VGN 45 usage_02461.pdb 1 -MILYPYSYDYKLPENNAELNNLAKAAVKELATLYG-T-K-YTYGP- 42 usage_02971.pdb 1 -HIVFPYSYTRSKSKDHEELSLVASEAVRAIEKTSK-N-T-RYTHG- 42 usage_03606.pdb 1 --LLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYG-T-S-YKYG-- 40 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################