################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:40 2021 # Report_file: c_0510_29.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00145.pdb # 2: usage_00146.pdb # 3: usage_00208.pdb # 4: usage_00209.pdb # # Length: 118 # Identity: 47/118 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/118 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/118 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 --ERFLNARDTLRALLDNNVVPVINENDAVATAEIKV----GDNDNLSALAAILAGADKL 54 usage_00146.pdb 1 --ERFLNARDTLRALLDNNVVPVINENDAVATAEIKV----GDNDNLSALAAILAGADKL 54 usage_00208.pdb 1 DRERYLNARSTLLTLLRLGVVPIINENDTVVTD----EIK--DNDTLGALVANLIEGDAL 54 usage_00209.pdb 1 DRERYLNARSTLLTLLRLGVVPIINENDTVVTD----EIKFGDNDTLGALVANLIEGDAL 56 ER LNAR TL LL VVP INEND V T DND L AL A L D L usage_00145.pdb 55 LLLTDQ-----------------MSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEG 95 usage_00146.pdb 55 LLLTDQGG---------------MSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEG 97 usage_00208.pdb 55 IILTDQ--QGLLVAEASAGAPELMLTKILAAKRAAHSGANTVIASGRERDVLLRLASG 110 usage_00209.pdb 57 IILTDQ-----------------MLTKILAAKRAAHSGANTVIASGRERDVLLRLASG 97 LTDQ M TK AA A G T IA G V G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################