################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:36 2021 # Report_file: c_0083_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00019.pdb # 2: usage_00021.pdb # 3: usage_00033.pdb # 4: usage_00034.pdb # 5: usage_00051.pdb # 6: usage_00060.pdb # 7: usage_00157.pdb # 8: usage_00159.pdb # 9: usage_00256.pdb # 10: usage_00258.pdb # 11: usage_00428.pdb # # Length: 218 # Identity: 49/218 ( 22.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 179/218 ( 82.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/218 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00021.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00033.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00034.pdb 1 WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHE 60 usage_00051.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00060.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00157.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00159.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00256.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00258.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 usage_00428.pdb 1 -------PKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP 53 pkrLveLlshesTlvqtpAlrAvgnivtGndlqtQvVInagvlpaLrlLLSsp usage_00019.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 usage_00021.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 usage_00033.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSG 113 usage_00034.pdb 61 STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAG 120 usage_00051.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 usage_00060.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSG 113 usage_00157.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSG 113 usage_00159.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSG 113 usage_00256.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 usage_00258.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 usage_00428.pdb 54 KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 113 kenikkeAcwtisNItaGNteQiQaVIdAnliPpLvkLLevae ktKKEACWaISNassG usage_00019.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00021.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00033.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00034.pdb 121 N---TEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGL-QR--------PD 168 usage_00051.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00060.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00157.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00159.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00256.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00258.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 usage_00428.pdb 114 GLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD-KEARGLNINE 172 g pdiIrylvsqgcIkPLcdLLEiAdnriievtldAleNilkmGe d ne usage_00019.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00021.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00033.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00034.pdb 169 IIRYLVSQGCIKPLCDLLEI------------------ 188 usage_00051.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYF- 209 usage_00060.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00157.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00159.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 usage_00256.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYF- 209 usage_00258.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYF- 209 usage_00428.pdb 173 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFG 210 nadfiekaGgmekifncqqn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################