################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:52:55 2021 # Report_file: c_0203_1.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00007.pdb # 4: usage_00010.pdb # 5: usage_00015.pdb # 6: usage_00017.pdb # 7: usage_00020.pdb # 8: usage_00023.pdb # 9: usage_00026.pdb # 10: usage_00028.pdb # 11: usage_00031.pdb # 12: usage_00033.pdb # 13: usage_00036.pdb # 14: usage_00038.pdb # 15: usage_00041.pdb # 16: usage_00053.pdb # 17: usage_00056.pdb # 18: usage_00061.pdb # 19: usage_00073.pdb # 20: usage_00079.pdb # 21: usage_00082.pdb # 22: usage_00084.pdb # 23: usage_00087.pdb # # Length: 163 # Identity: 89/163 ( 54.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/163 ( 57.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/163 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------------------------QLVKIAKR--GGVTAMEAVHASRNALT-P-L 27 usage_00004.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00007.pdb 1 -----------WRNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 44 usage_00010.pdb 1 GGKQALET----VQALLPVLCQAHGLTPEQVVAIASNIG-GKQALETVQALLPVLCQA-H 54 usage_00015.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00017.pdb 1 ---------------------------TGQLLKIAKR--GGVTAVEAVHAWRNALTGAPL 31 usage_00020.pdb 1 -----------WRNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 44 usage_00023.pdb 1 ---------------------------PEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 31 usage_00026.pdb 1 ------------RNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 43 usage_00028.pdb 1 --------------------------DTGQLLKIAKR--GGVTAVEAVHAWRNALTGAPL 32 usage_00031.pdb 1 --VTAVEAVHAWRNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 53 usage_00033.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00036.pdb 1 ------------RNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 43 usage_00038.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00041.pdb 1 ------------RNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 43 usage_00053.pdb 1 --------------------------DTGQLLKIAKR--GGVTAVEAVHAWRNALTGAPL 32 usage_00056.pdb 1 ------------RNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 43 usage_00061.pdb 1 --VTAVEAVHAWRNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 53 usage_00073.pdb 1 ---------------------------TGQLLKIAKR--GGVTAVEAVHAWRNALTGAPL 31 usage_00079.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00082.pdb 1 --VTAVEAVHAWRNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 53 usage_00084.pdb 1 --------------------------TPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 32 usage_00087.pdb 1 ------------RNALTGA---PLNLTPEQVVAIASHDG-GKQALETVQRLLPVLCQA-H 43 Q IA G A E V L a usage_00001.pdb 28 NLTPAQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASHDGGKQALETMQRL 87 usage_00004.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00007.pdb 45 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 104 usage_00010.pdb 55 GLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRL 114 usage_00015.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00017.pdb 32 NLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRL 91 usage_00020.pdb 45 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 104 usage_00023.pdb 32 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 91 usage_00026.pdb 44 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 103 usage_00028.pdb 33 NLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRL 92 usage_00031.pdb 54 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 113 usage_00033.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00036.pdb 44 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 103 usage_00038.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00041.pdb 44 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 103 usage_00053.pdb 33 NLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRL 92 usage_00056.pdb 44 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 103 usage_00061.pdb 54 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 113 usage_00073.pdb 32 NLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRL 91 usage_00079.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00082.pdb 54 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 113 usage_00084.pdb 33 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 92 usage_00087.pdb 44 GLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQAL 103 LTP QVVAIAShdGGKQALETVQRLLPVLCQAHGLTP QVVAIASHDGGKQALETvQ L usage_00001.pdb 88 LPVLCQAHGLPPDQVVAIASNIGGKQALETVQRLLPVLCQAHG 130 usage_00004.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 125 usage_00007.pdb 105 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 137 usage_00010.pdb 115 LPVLCQAHGLTPQQVVAIASNGGGKQALETVQRL--------- 148 usage_00015.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 125 usage_00017.pdb 92 LPVLCQAHGLTPEQVVAIASHDGGKQALETVQA---------- 124 usage_00020.pdb 105 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 137 usage_00023.pdb 92 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 124 usage_00026.pdb 104 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 136 usage_00028.pdb 93 LPVLCQAHGLTPEQVVAIASHDGGKQALETVQA---------- 125 usage_00031.pdb 114 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 146 usage_00033.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 125 usage_00036.pdb 104 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 136 usage_00038.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 125 usage_00041.pdb 104 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 136 usage_00053.pdb 93 LPVLCQAHGLTPEQVVAIASHDGGKQALETVQA---------- 125 usage_00056.pdb 104 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 136 usage_00061.pdb 114 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 146 usage_00073.pdb 92 LPVLCQAHGLTPEQVVAIASHDGGKQALETVQA---------- 124 usage_00079.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHG 135 usage_00082.pdb 114 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 146 usage_00084.pdb 93 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 125 usage_00087.pdb 104 LPVLCQAHGLTPEQVVAIASNGGGKQALETVQR---------- 136 LPVLCQAHGLtP QVVAIAS GGKQALETVQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################