################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:57 2021 # Report_file: c_1168_21.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00071.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00260.pdb # 7: usage_00261.pdb # 8: usage_00570.pdb # 9: usage_00571.pdb # 10: usage_01401.pdb # 11: usage_01529.pdb # 12: usage_01530.pdb # 13: usage_01680.pdb # 14: usage_01681.pdb # # Length: 54 # Identity: 3/ 54 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 54 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 54 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00072.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00073.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVS- 44 usage_00074.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00075.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVS- 44 usage_00260.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00261.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00570.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_00571.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_01401.pdb 1 GKLL-YQVIYDDLAKY----SLDTL-KKDV-LIQYPDK--------HTLTYL-- 37 usage_01529.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVS- 44 usage_01530.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVS- 44 usage_01680.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 usage_01681.pdb 1 ----KTTFKTV--KDSLTNYE---SATGRSWDIFNPNKVNPYSGKPPSYKLVST 45 ttfktv kds e s tgrs dIfnPnK psyklv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################