################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:53 2021 # Report_file: c_1465_39.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00145.pdb # 2: usage_00714.pdb # 3: usage_00766.pdb # 4: usage_00890.pdb # 5: usage_01118.pdb # 6: usage_01119.pdb # 7: usage_01120.pdb # 8: usage_01176.pdb # 9: usage_01345.pdb # 10: usage_01839.pdb # 11: usage_01841.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 33 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 33 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00145.pdb 1 --DAERR---LAGLERASGARLGV---YAYDT- 24 usage_00714.pdb 1 ----------DIEQTMEEDNPLGSLCRGILDLN 23 usage_00766.pdb 1 -NTIEEQ---LNTLEKYSQGRLGV---ALINT- 25 usage_00890.pdb 1 --TFEEFKDRLFALAKKNGVEVQI---SFLETR 28 usage_01118.pdb 1 --SVQQQ---LEALEKSSGGRLGV---ALINTA 25 usage_01119.pdb 1 --SVQQQ---LEALEKSSGGRLGV---ALINTA 25 usage_01120.pdb 1 --SVQQQ---LEALEKSSGGRLGV---ALINTA 25 usage_01176.pdb 1 -SAVQQK---LAALEKSSGGRLGV---ALIDT- 25 usage_01345.pdb 1 TADVQQK---LAELERQSGGRLGV---ALINT- 26 usage_01839.pdb 1 --SVQQQ---LEALEKSSGGRLGV---ALINTA 25 usage_01841.pdb 1 ---VQQQ---LEALEKSSGGRLGV---ALIN-- 22 l l lg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################