################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:41 2021 # Report_file: c_0794_31.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00117.pdb # 2: usage_00253.pdb # 3: usage_00365.pdb # 4: usage_00402.pdb # 5: usage_00403.pdb # 6: usage_00404.pdb # 7: usage_00405.pdb # 8: usage_00406.pdb # 9: usage_00481.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 68 ( 8.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 68 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00117.pdb 1 PKLLFWGTPGA--LIPPAEAARLAESLPN-CKTVDIGPGLHYL--QEDNPDLIGSEIARW 55 usage_00253.pdb 1 RTIHIVGARSN--W-PPQNQLFLQKTLQN-YHLDVIPGGSHLV--NVEAPDLVIERINHH 54 usage_00365.pdb 1 PKLLLLAG-VD--RL-DKDLTIGQMQG-K-FQMQVLPQCGHAV--HEDAPDKVAEAVATF 52 usage_00402.pdb 1 PTLVLVGQFDA--ISPPEEMEAMARTIPQ-SQFVVIPDAGHLP--PMEQPERVTQAIREW 55 usage_00403.pdb 1 PTLVLVGQFDA--ISPPEEMEAMARTIPQ-SQFVVIPDAGHLP--PMEQPERVTQAIREW 55 usage_00404.pdb 1 PTLVLVGQFDA--ISPPEEMEAMARTIPQ-SQFVVIPDAGHLP--PMEQPERVTQAIREW 55 usage_00405.pdb 1 PTLVLVGQFDA--ISPPEEMEAMARTIPQ-SQFVVIPDAGHLP--PMEQPERVTQAIREW 55 usage_00406.pdb 1 PTLVLVGQFDA--ISPPEEMEAMARTIPQ-SQFVVIPDAGHLP--PMEQPERVTQAIREW 55 usage_00481.pdb 1 PTLYVRPAQPLVEQEKPEWRGDVLA-A--MGQVVEAPGDH-FTIIEGEHVASTAHIVGDW 56 p l p p p usage_00117.pdb 56 LPAL---- 59 usage_00253.pdb 55 IHEFVLT- 61 usage_00365.pdb 53 LIRHR--- 57 usage_00402.pdb 56 LRKV---- 59 usage_00403.pdb 56 LRKVHTEA 63 usage_00404.pdb 56 LRKVHT-- 61 usage_00405.pdb 56 LRKV---- 59 usage_00406.pdb 56 LRKV---- 59 usage_00481.pdb 57 LREAHA-- 62 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################