################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:01 2021 # Report_file: c_0584_16.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00059.pdb # 2: usage_00060.pdb # 3: usage_00061.pdb # 4: usage_00062.pdb # 5: usage_00063.pdb # 6: usage_00064.pdb # 7: usage_00065.pdb # 8: usage_00076.pdb # # Length: 86 # Identity: 20/ 86 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 86 ( 72.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 86 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 -VFIVTGASSGLGAAVTR-LAQEGATVLGLDLKPP-----------VRFRNADVTNEADA 47 usage_00060.pdb 1 -VFIVTGASSGLGAAVTR-LAQEGATVLGLDL--------------VRFRNADVTNEADA 44 usage_00061.pdb 1 --FIVTGASSGLGAAVTR-LAQEGATVLGLDLKPP-----------VRFRNADVTNEADA 46 usage_00062.pdb 1 RVFIVTGASSGLGAAVTR-LAQEGATVLGLDLKPP-----------VRFRNADVTNEADA 48 usage_00063.pdb 1 RVFIVTGASSGLGAAVTR-LAQEGATVLGLDLKPP-----------VRFRNADVTNEADA 48 usage_00064.pdb 1 -VFIVTGASSGLGAAVTR-LAQEGATVLGLDLK-------------VRFRNADVTNEADA 45 usage_00065.pdb 1 RVFIVTGASSGLGAAVTR-LAQEGATVLGLDL--------------VRFRNADVTNEADA 45 usage_00076.pdb 1 GTIIVSGGSQGLGLTTVRCFLEAGYNVATFSRRESPAVTELSERADFHWQALDCTDYSAL 60 fIVtGaSsGLGaavtR laqeGatVlgldl vrfrnaDvTneada usage_00059.pdb 48 TAALAFAKQEFGHVHGLVNC------ 67 usage_00060.pdb 45 TAALAFAKQEFGHVHGLVNC------ 64 usage_00061.pdb 47 TAALAFAKQEFGHVHGLVNCAGTAPG 72 usage_00062.pdb 49 TAALAFAKQEFGHVHGLVNC------ 68 usage_00063.pdb 49 TAALAFAKQEFGHVHGLVN------- 67 usage_00064.pdb 46 TAALAFAKQEFGHVHGLVNC------ 65 usage_00065.pdb 46 TAALAFAKQEFGHVHGLVNC------ 65 usage_00076.pdb 61 TAFVQQVEKRFGGLDGLVNN------ 80 TAalafakqeFGhvhGLVN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################