################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:07 2021 # Report_file: c_0870_63.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00214.pdb # 2: usage_00338.pdb # 3: usage_00339.pdb # 4: usage_00370.pdb # 5: usage_00371.pdb # # Length: 66 # Identity: 9/ 66 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 66 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 66 ( 39.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00214.pdb 1 ----------MIDGKKRFNEFRRICPSITQRM-LTLQLRELEADGIVHREVYHQVPPKVE 49 usage_00338.pdb 1 EWWSI-LIRDALQGLRRFDEFSRSLDI-AP-N-LTRRLNALVEAGLLERQPYSQRPLRYQ 56 usage_00339.pdb 1 EWWSI-LIRDALQGLRRFDEFSRSLDI-AP-N-LTRRLNALVEAGLLERQPYSY------ 50 usage_00370.pdb 1 ---WSLIVRDAFEGLTRFGEFQKSLGL-AK-NILAARLRNLVEHGVV-AVPAESGSHQEY 54 usage_00371.pdb 1 ---WSLIVRDAFEGLTRFGEFQKSLGL-AK-NILAARLRNLVEHGVV-AVPAESGSHQEY 54 a Gl RF EF sl a n L rL Lve G p usage_00214.pdb 50 YS---- 51 usage_00338.pdb 57 -Y---- 57 usage_00339.pdb 51 --QYVP 54 usage_00370.pdb 55 RL---- 56 usage_00371.pdb 55 RL---- 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################