################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:44 2021 # Report_file: c_0419_15.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00021.pdb # 2: usage_00147.pdb # 3: usage_00148.pdb # 4: usage_00195.pdb # 5: usage_00473.pdb # 6: usage_00492.pdb # 7: usage_00559.pdb # 8: usage_00632.pdb # 9: usage_00671.pdb # # Length: 84 # Identity: 16/ 84 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 84 ( 51.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 84 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTAREWER 60 usage_00147.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWER 60 usage_00148.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWER 60 usage_00195.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWER 60 usage_00473.pdb 1 -SATLVCEVLSTVSAGVVVSWMVNGKVRNEGVQMEPTKMSGNQYLT-ISRLTSSVEEWQS 58 usage_00492.pdb 1 NQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMA-TSYLTMTADAWKS 59 usage_00559.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWER 60 usage_00632.pdb 1 NKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWER 60 usage_00671.pdb 1 AKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWER 60 ATLVC i fyp V V W vdGtp t G ttqpsk n SyLT ta W usage_00021.pdb 61 HSSYSCQVTH--EGHTVEKSLSRA 82 usage_00147.pdb 61 HSSYSCQVTH--EGHTVEKSLSR- 81 usage_00148.pdb 61 HSSYSCQVTH--EGHTVEKSLSR- 81 usage_00195.pdb 61 HSSYSCQVTH--EGHTVEKSLS-- 80 usage_00473.pdb 59 GVEYTCSAKQDQSSTPVVKRTRK- 81 usage_00492.pdb 60 RNTFICKVTH--GGNTVEKSLSP- 80 usage_00559.pdb 61 HSSYSCQVTH--EGHTVEKSLSR- 81 usage_00632.pdb 61 HSSYSCQVTH--EGHTVEKSLS-- 80 usage_00671.pdb 61 HSSYSCQVTH--EGHSSNKTLS-- 80 y C vth g v K ls #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################