################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:01 2021 # Report_file: c_0450_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00045.pdb # 6: usage_00046.pdb # 7: usage_00047.pdb # 8: usage_00048.pdb # 9: usage_00049.pdb # 10: usage_00057.pdb # # Length: 110 # Identity: 7/110 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/110 ( 24.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/110 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ----HLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-T--Q----K---- 45 usage_00018.pdb 1 -AVKQLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-T--Q----K---- 48 usage_00019.pdb 1 -AVKHLIVLKFKDEITEAQKEEFFKTWVNLVNIIPAMKDVYWGKDV-T--Q----K---- 48 usage_00020.pdb 1 ----HLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-T--Q----K---- 45 usage_00045.pdb 1 --VKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-S-IE----NL--H 50 usage_00046.pdb 1 KLVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTDL-GM-ESAELN---- 54 usage_00047.pdb 1 ----HLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-T--Q----K---- 45 usage_00048.pdb 1 -AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKD--------------- 44 usage_00049.pdb 1 -AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-T------------ 46 usage_00057.pdb 1 --LFHQVFFWLKNPGDKADRDKLIAGLKALKA-IDVIQQLHVGVPAAT--E--K-RDVVD 52 h fKd nL I mk wG d usage_00017.pdb 46 NKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY-- 93 usage_00018.pdb 49 N---GYTHIVEVTF--VETIQDYIIHPAHVGFGDVYRSFWEKLLIFD--- 90 usage_00019.pdb 49 NKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY-- 96 usage_00020.pdb 46 NKEEGYTHIVEVTFESVETIQDFIIHPAHVGFGDVYRSFWEKLLIFD--- 92 usage_00045.pdb 51 Q---GYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKP 97 usage_00046.pdb 55 R---GYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQRLVI---- 97 usage_00047.pdb 46 N---GYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFD--- 89 usage_00048.pdb 45 ----GYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFD--- 87 usage_00049.pdb 47 ----GYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY-- 90 usage_00057.pdb 53 N---SYDVSEL-VFKSVEDQKRYRDHPLLQKFVADCSHLWSKVVVYDS-- 96 gYth e tF e y hpa F k l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################