################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:17:05 2021 # Report_file: c_0973_58.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00048.pdb # 2: usage_00094.pdb # 3: usage_00119.pdb # 4: usage_00152.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00273.pdb # 8: usage_00323.pdb # 9: usage_00386.pdb # 10: usage_00387.pdb # 11: usage_00398.pdb # 12: usage_00507.pdb # 13: usage_00567.pdb # 14: usage_00568.pdb # 15: usage_00594.pdb # 16: usage_00595.pdb # 17: usage_00668.pdb # 18: usage_00669.pdb # 19: usage_00670.pdb # 20: usage_00671.pdb # 21: usage_00672.pdb # 22: usage_00673.pdb # 23: usage_00674.pdb # 24: usage_00675.pdb # 25: usage_00676.pdb # 26: usage_00677.pdb # 27: usage_00678.pdb # 28: usage_00679.pdb # 29: usage_00680.pdb # 30: usage_00681.pdb # 31: usage_00682.pdb # 32: usage_00763.pdb # 33: usage_00767.pdb # 34: usage_00773.pdb # 35: usage_00796.pdb # 36: usage_00797.pdb # 37: usage_00849.pdb # 38: usage_00850.pdb # # Length: 58 # Identity: 26/ 58 ( 44.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 58 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 58 ( 51.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVD----------NIKKEICINKML 46 usage_00094.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVDMK----RCPENIKKEICINKML 52 usage_00119.pdb 1 -DWDLVQTLG-----GEVQLAVNRVTEEAVAVKIVDMK--------NIKKEICINKML 44 usage_00152.pdb 1 -DWDLVQTLGEGA--GEVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 44 usage_00262.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 42 usage_00263.pdb 1 EDWDLVQTLG-------VQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 42 usage_00273.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVDMK----RCPENIKKEICINKML 52 usage_00323.pdb 1 EDWDLVQTLG------EVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 43 usage_00386.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 42 usage_00387.pdb 1 EDWDLVQTLG------EVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 41 usage_00398.pdb 1 --------LGEGAY-GEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 48 usage_00507.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVD----------NIKKEICINKML 46 usage_00567.pdb 1 -DWDLVQTLGEGA--GEVQLAVNRVTEEAVAVKIVDM--------ENIKKEICINKML 47 usage_00568.pdb 1 -DWDLVQTLGE---GGEVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 45 usage_00594.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 47 usage_00595.pdb 1 -DWDLVQTLGEG--AGEVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 46 usage_00668.pdb 1 -DWDLVQTLGE----GEVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 42 usage_00669.pdb 1 -DWDLVQTLG-----GEVQLAVNRVTEEAVAVKIV------------IKKEICINKML 40 usage_00670.pdb 1 -DWDLVQTLGEG---GEVQLAVNRVTEEAVAVKIVDMK--------NIKKEICINKML 46 usage_00671.pdb 1 -DWDLVQTLG-----GEVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 41 usage_00672.pdb 1 -DWDLVQTLGEG---GEVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 43 usage_00673.pdb 1 -DWDLVQTLGEG---GEVQLAVNRVTEEAVAVKIV---------PENIKK-EIINKML 44 usage_00674.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVDM--------ENIKKEICINKML 48 usage_00675.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 42 usage_00676.pdb 1 -DWDLVQTLGE----GEVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 42 usage_00677.pdb 1 -DWDLVQTLG-----GEVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 43 usage_00678.pdb 1 -DWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIV------------IKKEICINKML 44 usage_00679.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 40 usage_00680.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 40 usage_00681.pdb 1 -DWDLVQTLG-----GEVQLAVNRVTEEAVAVKIV----------ENIKKEICINKML 42 usage_00682.pdb 1 -DWDLVQTLGE----GEVQLAVNRVTEEAVAVKIVD----------NIKKEICINKML 43 usage_00763.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVDM---------NIKKEICINKML 42 usage_00767.pdb 1 EDWDLVQTLGEGAY-GEVQLAVNRVTEEAVAVKIVDMK----RCPENIKKEICINKML 53 usage_00773.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVD----------NIKKEICINKML 41 usage_00796.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIVD----------NIKKEICINKML 41 usage_00797.pdb 1 -DWDLVQTLGE-----EVQLAVNRVTEEAVAVKIVDM--------ENIKKEICINK-- 42 usage_00849.pdb 1 -DWDLVQTLGEGAA-GEVQLAVNRVTEEAVAVKIVD---------ENIKKEICINKML 47 usage_00850.pdb 1 -DWDLVQTLG------EVQLAVNRVTEEAVAVKIV-----------NIKKEICINKML 40 LG VQLAVNRVTEEAVAVKIV IKK icINK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################