################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:43:01 2021 # Report_file: c_1363_111.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00063.pdb # 2: usage_00064.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00170.pdb # 6: usage_00603.pdb # 7: usage_00604.pdb # 8: usage_01033.pdb # 9: usage_01034.pdb # 10: usage_01035.pdb # 11: usage_01036.pdb # 12: usage_01037.pdb # 13: usage_01038.pdb # 14: usage_01039.pdb # 15: usage_01575.pdb # 16: usage_01576.pdb # # Length: 36 # Identity: 4/ 36 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 36 ( 80.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 36 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_00064.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_00065.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_00066.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_00170.pdb 1 NF-DAH--TPMMQQYLRLKAQHP--EILLFYRMG-- 29 usage_00603.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_00604.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01033.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTE-- 34 usage_01034.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01035.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTE-- 34 usage_01036.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01037.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01038.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01039.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01575.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 usage_01576.pdb 1 VFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI 36 vF qyd svvrrelfRLvArlk gattvmtte #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################