################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:48:40 2021 # Report_file: c_0923_69.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00120.pdb # 2: usage_00121.pdb # 3: usage_00233.pdb # 4: usage_00234.pdb # 5: usage_00237.pdb # 6: usage_00238.pdb # 7: usage_00340.pdb # 8: usage_00385.pdb # 9: usage_00386.pdb # 10: usage_00644.pdb # 11: usage_00647.pdb # 12: usage_00772.pdb # 13: usage_00773.pdb # 14: usage_00774.pdb # 15: usage_00775.pdb # 16: usage_00776.pdb # 17: usage_00777.pdb # 18: usage_00778.pdb # 19: usage_00779.pdb # 20: usage_00780.pdb # 21: usage_00906.pdb # 22: usage_00907.pdb # # Length: 45 # Identity: 21/ 45 ( 46.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 45 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 45 ( 35.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00121.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00233.pdb 1 NRDFVEGVSGG-------AWVDLVLEHGGCVTTMAQGKPTLDFEL 38 usage_00234.pdb 1 NRDFVEGVSGG-------AWVDLVLEHGGCVTTMAQGKPTLDFEL 38 usage_00237.pdb 1 ---VGVGNRDFVEGVSGGAWVDLVLEHGGCVTTMAQGKPTLDFEL 42 usage_00238.pdb 1 ---VGVGNRDFVEGVSGGAWVDLVLEHGGCVTTMAQGKPTLDFEL 42 usage_00340.pdb 1 NRDFVEGV-S--------SWVDIVLEHGSCVTTMAKNKPTLDFEL 36 usage_00385.pdb 1 NRDFVEGLSGA-------TWVDVVLEHGGCVTTMAKNKPTLDIEL 38 usage_00386.pdb 1 NRDFVEGLSGA-------TWVDVVLEHGGCVTTMAKNKPTLDIEL 38 usage_00644.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00647.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00772.pdb 1 NRDFVEGV------------VDIVLEHGSCVTTMAKNKPTLDFEL 33 usage_00773.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00774.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00775.pdb 1 NRDFVEGV----------SWVDIVLEHGSCVTTMAKNKPTLDFEL 35 usage_00776.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00777.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00778.pdb 1 NRDFVEGV----------SWVDIVLEHGSCVTTMAKNKPTLDFEL 35 usage_00779.pdb 1 NRDFVEGV----------SWVDIVLEHGSCVTTMAKNKPTLDFEL 35 usage_00780.pdb 1 NRDFVEG------------WVDIVLEHGSCVTTMAKNKPTLDFEL 33 usage_00906.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 usage_00907.pdb 1 NRDFVEGVSGG-------SWVDIVLEHGSCVTTMAKNKPTLDFEL 38 G VD VLEHG CVTTMA KPTLD EL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################