################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:15:58 2021 # Report_file: c_1132_48.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00052.pdb # 2: usage_00137.pdb # 3: usage_00153.pdb # 4: usage_00155.pdb # 5: usage_00156.pdb # 6: usage_00172.pdb # 7: usage_00216.pdb # 8: usage_00258.pdb # 9: usage_00259.pdb # 10: usage_00260.pdb # 11: usage_00261.pdb # 12: usage_00262.pdb # 13: usage_00263.pdb # 14: usage_00267.pdb # 15: usage_00271.pdb # 16: usage_00272.pdb # 17: usage_00330.pdb # 18: usage_00408.pdb # 19: usage_00420.pdb # 20: usage_00421.pdb # 21: usage_00424.pdb # 22: usage_00437.pdb # 23: usage_00618.pdb # 24: usage_00678.pdb # 25: usage_00679.pdb # # Length: 59 # Identity: 40/ 59 ( 67.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 59 ( 67.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 YSDFVRFRPPVR--RLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSA 57 usage_00137.pdb 1 ---------------LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 44 usage_00153.pdb 1 YADFRDFRPPVRM-PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 57 usage_00155.pdb 1 YADFRDFRPPVRM-PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 57 usage_00156.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 58 usage_00172.pdb 1 ---------------LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSS- 43 usage_00216.pdb 1 YADFRDFRPPVR--PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 56 usage_00258.pdb 1 YADFRDFRPPVR--PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 57 usage_00259.pdb 1 YADFRDFRPPVR--PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 57 usage_00260.pdb 1 YADFRDFRPPVRM-PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 58 usage_00261.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00262.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00263.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00267.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00271.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00272.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00330.pdb 1 ---------------LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 44 usage_00408.pdb 1 YADFRDFRPPVRM-PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 57 usage_00420.pdb 1 YADFRDFRPPVR--PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 57 usage_00421.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00424.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSA 59 usage_00437.pdb 1 YADFRDFRPPVRMSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 58 usage_00618.pdb 1 YSDFVRFRPPVR--RLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSA 57 usage_00678.pdb 1 YADFRDFRPPVR--PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSS- 56 usage_00679.pdb 1 ---------------LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSS- 43 LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLT DQI LLKSS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################