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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:02:41 2021
# Report_file: c_1378_1.html
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#====================================
# Aligned_structures: 4
#   1: usage_00040.pdb
#   2: usage_00041.pdb
#   3: usage_00459.pdb
#   4: usage_00982.pdb
#
# Length:        249
# Identity:        7/249 (  2.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     10/249 (  4.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          183/249 ( 73.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00040.pdb         1  LKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDD   60
usage_00041.pdb         1  LKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDD   60
usage_00459.pdb         1  ---------------------------------------------------LLDNWDSVT    9
usage_00982.pdb         1  -------------------------------------------------KLLDNWDSVTS   11
                                                                                       

usage_00040.pdb        61  FQKKWQEEMEL--YRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRT  118
usage_00041.pdb        61  FQKKWQEEMEL--YRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRT  118
usage_00459.pdb        10  STFSKLREQLGPV-TQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEME   68
usage_00982.pdb        12  TFSKLREQLG-PV-TQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEME   69
                              k  ee       Q          EG RQ      E          D           

usage_00040.pdb       119  H-----------------------------------------------------------  119
usage_00041.pdb       119  H-----------------------------------------------------------  119
usage_00459.pdb        69  LYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQR  128
usage_00982.pdb        70  LYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQR  129
                                                                                       

usage_00040.pdb            ------------------------------------------------------------     
usage_00041.pdb            ------------------------------------------------------------     
usage_00459.pdb       129  LAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQGL---------------  173
usage_00982.pdb       130  LAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQGLLPVLESFKVSFLSAL  189
                                                                                       

usage_00040.pdb       120  --------L  120
usage_00041.pdb       120  --------L  120
usage_00459.pdb            ---------     
usage_00982.pdb       190  EEYTKKLN-  197
                                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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