################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:22:56 2021 # Report_file: c_1297_198.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00037.pdb # 2: usage_01100.pdb # 3: usage_01101.pdb # 4: usage_01102.pdb # 5: usage_01103.pdb # 6: usage_01104.pdb # 7: usage_01112.pdb # 8: usage_01383.pdb # 9: usage_01437.pdb # 10: usage_01438.pdb # 11: usage_01545.pdb # 12: usage_01546.pdb # 13: usage_01547.pdb # 14: usage_01548.pdb # 15: usage_01549.pdb # 16: usage_02001.pdb # 17: usage_02378.pdb # 18: usage_02628.pdb # 19: usage_03084.pdb # 20: usage_03085.pdb # 21: usage_03086.pdb # 22: usage_03087.pdb # 23: usage_03088.pdb # 24: usage_03089.pdb # # Length: 34 # Identity: 4/ 34 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 34 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 34 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 DGQANLLNALHVAANYP--I-NEVTLFFNNRLR- 30 usage_01100.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_01101.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_01102.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_01103.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_01104.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_01112.pdb 1 -GPMNLLEAVRVAGDK-QSRGRGVMVVINDRIGS 32 usage_01383.pdb 1 -GPFNLYNAVVTAADK-ASANRGVLVVMNDTVLD 32 usage_01437.pdb 1 ---FNLYNAVVTAADK-ASANRGVLVVMNDTVLD 30 usage_01438.pdb 1 --PFNLYNAVVTAADK-ASANRGVLVVMNDTVLD 31 usage_01545.pdb 1 --PMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 31 usage_01546.pdb 1 --PMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 31 usage_01547.pdb 1 ---MNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 30 usage_01548.pdb 1 DGPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 33 usage_01549.pdb 1 DGPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 33 usage_02001.pdb 1 DGPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 33 usage_02378.pdb 1 -GPKNLYNAVALVVNK-EAKNKGVVAINDK-ILS 31 usage_02628.pdb 1 --PFNLYNAVVTAADK-ASANRGVLVVMNDTVLD 31 usage_03084.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_03085.pdb 1 --PMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 31 usage_03086.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_03087.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_03088.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 usage_03089.pdb 1 -GPMNLYGAVKVAADK-NSRGRGVLVVLNDRIGS 32 NL Av a k gV n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################