################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:24 2021 # Report_file: c_1341_81.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00303.pdb # 2: usage_00310.pdb # 3: usage_00340.pdb # 4: usage_00657.pdb # # Length: 62 # Identity: 5/ 62 ( 8.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 62 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 62 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00303.pdb 1 ----KKQLQELREAIELPLK--HPELFEEVGIDPP--KGVLLYGPPGCGKTLMAKAIAHE 52 usage_00310.pdb 1 DPV-TRVLDDGELLVQQTKNSD-----------RTPLVSVLLEGPPHSGKTALAAKIAEE 48 usage_00340.pdb 1 -------IELYRAGYE-A----------------R--IPMMLKGPTGCGKSRFVEHMAWK 34 usage_00657.pdb 1 ---MDIQKQEVREAVELPLT--HFELYKQIGIDPP--RGVLMYGPPGCGKTMLAKAVAH- 52 r e vll GPpgcGKt a A usage_00303.pdb 53 VN 54 usage_00310.pdb 49 SN 50 usage_00340.pdb 35 LN 36 usage_00657.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################