################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:28 2021 # Report_file: c_1436_32.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00078.pdb # 2: usage_00130.pdb # 3: usage_00131.pdb # 4: usage_00141.pdb # 5: usage_00217.pdb # 6: usage_00218.pdb # 7: usage_00343.pdb # 8: usage_00435.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 33 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 33 ( 69.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 --DKSL--FRKALPLARRV-----VALR----- 19 usage_00130.pdb 1 ---------VTLLSRYLDL-----LKDTN-LIK 18 usage_00131.pdb 1 ---------VTLLSRYLDL-----LKDTN-LIK 18 usage_00141.pdb 1 PT-----LRPENKELVEKF-----KAAG----- 18 usage_00217.pdb 1 NL-----YDPGNVSLLYHLINALKALHLFK--- 25 usage_00218.pdb 1 ------ASLKPEFIDIIKA-----AEVK----- 17 usage_00343.pdb 1 -A-----SLKPEFVDIINA-------------- 13 usage_00435.pdb 1 ---------VTLLSRYLDL-----LKDTN-LIK 18 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################