################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:34 2021 # Report_file: c_1148_241.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00690.pdb # 2: usage_01252.pdb # 3: usage_01268.pdb # 4: usage_01447.pdb # 5: usage_01448.pdb # 6: usage_01477.pdb # 7: usage_01994.pdb # 8: usage_02129.pdb # 9: usage_02156.pdb # 10: usage_02598.pdb # 11: usage_03128.pdb # 12: usage_03168.pdb # 13: usage_03171.pdb # 14: usage_03276.pdb # 15: usage_03685.pdb # 16: usage_03687.pdb # 17: usage_03692.pdb # # Length: 36 # Identity: 20/ 36 ( 55.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 36 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 36 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00690.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRVLST 32 usage_01252.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_01268.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_01447.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_01448.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_01477.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_01994.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_02129.pdb 1 NTQPTIRKDGLKLVGSWKKDRATGDADEPELRV--- 33 usage_02156.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_02598.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_03128.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_03168.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_03171.pdb 1 ----TIRKDGLKLVGSWK--------DEPELRV--- 21 usage_03276.pdb 1 -TQPTIRKDGLKLVGSWK--------DEPELRV--- 24 usage_03685.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 usage_03687.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELR---- 28 usage_03692.pdb 1 ----TIRKDGLKLVGSWKKDRATGDADEPELRV--- 29 TIRKDGLKLVGSWK DEPELR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################