################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:52 2021 # Report_file: c_1369_17.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00138.pdb # 4: usage_00267.pdb # 5: usage_00324.pdb # 6: usage_00327.pdb # 7: usage_00373.pdb # 8: usage_00445.pdb # 9: usage_00447.pdb # 10: usage_00550.pdb # 11: usage_00552.pdb # 12: usage_00648.pdb # 13: usage_00663.pdb # 14: usage_00679.pdb # 15: usage_00752.pdb # 16: usage_00862.pdb # 17: usage_00863.pdb # 18: usage_00879.pdb # 19: usage_01033.pdb # 20: usage_01195.pdb # 21: usage_01202.pdb # 22: usage_01238.pdb # # Length: 75 # Identity: 29/ 75 ( 38.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 75 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 75 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 --------VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 51 usage_00025.pdb 1 ------------MKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 47 usage_00138.pdb 1 ---------AGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 50 usage_00267.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 57 usage_00324.pdb 1 ---------AGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 50 usage_00327.pdb 1 --IKAKQV-A-GLRIDLAQYRELETFAQFATE-LDPATRAQIIRGQRL-ELLKQEQYSP- 53 usage_00373.pdb 1 -R-AMKQ-VAGTMKLELAQYREVAAF------ALDAATQQLLSRGVRLTELLKQGQYSPM 51 usage_00445.pdb 1 -R-AMKQ-VAGTMKLELAQYREVAAF-------LDAATQQLLSRGVRLTELLKQGQYSPM 50 usage_00447.pdb 1 ------------MKLELAQYREVAAFA----D-LDAATQQLLSRGVRLTELLKQGQYSPM 43 usage_00550.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 57 usage_00552.pdb 1 -R-AMKQ-VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 56 usage_00648.pdb 1 ---------AGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 50 usage_00663.pdb 1 ------------MKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 47 usage_00679.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 57 usage_00752.pdb 1 ------------VKLELAQYREMAAFAQFGSD-LDAATQKLLNRGARLTELMKQPQYSPL 47 usage_00862.pdb 1 ---------AGPVKLELAQYREMAAF------ALDAATQKLLNRGARLTELMKQPQYSPL 45 usage_00863.pdb 1 ------------VKLELAQYREMAAFAQFGSD-LDAATQKLLNRGARLTELMKQPQYSPL 47 usage_00879.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAFA--GSD-LDAATQQLLSRGVRLTELLKQGQYSPM 55 usage_01033.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAF------ALDAATQQLLSRGVRLTELLKQGQYSPM 52 usage_01195.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 57 usage_01202.pdb 1 ---------AGTMKLELAQYREVAAFAQFGSD-LDAATQQLLSRGVRLTELLKQGQYSPM 50 usage_01238.pdb 1 TR-AMKQ-VAGTMKLELAQYREVAAF------ALDAATQQLLSRGVRLTELLKQGQYSPM 52 kleLAQYRE aaF LDaATq ll RG RL EL KQ QYSP usage_00024.pdb 52 AIEEQVAVIYAGVRG 66 usage_00025.pdb 48 AIEEQVAVIYAGVRG 62 usage_00138.pdb 51 AIEEQVAVIYAGVRG 65 usage_00267.pdb 58 AIEEQVAVIYAGVRG 72 usage_00324.pdb 51 AIEEQVAVIYAGVRG 65 usage_00327.pdb 54 PVEEQVVVLFAGVRG 68 usage_00373.pdb 52 AIEEQVAVIYAGVRG 66 usage_00445.pdb 51 AIEEQVAVIYAGVRG 65 usage_00447.pdb 44 AIEEQVAVIYAGVRG 58 usage_00550.pdb 58 AIEEQVAVIYAGVRG 72 usage_00552.pdb 57 AIEEQVAVIYAGVRG 71 usage_00648.pdb 51 AIEEQVAVIYAGVRG 65 usage_00663.pdb 48 AIEEQVAVIYAGVRG 62 usage_00679.pdb 58 AIEEQVAVIYAGVRG 72 usage_00752.pdb 48 TNAEIVIVIYAGTKG 62 usage_00862.pdb 46 TNAEIVIVIYAGTKG 60 usage_00863.pdb 48 TNAEIVIVIYAGTKG 62 usage_00879.pdb 56 AIEEQVAVIYAGVRG 70 usage_01033.pdb 53 AIEEQVAVIYAGVRG 67 usage_01195.pdb 58 AIEEQVAVIYAGVRG 72 usage_01202.pdb 51 AIEEQVAVIYAGVRG 65 usage_01238.pdb 53 AIEEQVAVIYAGVRG 67 E V ViyAG G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################