################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:52:26 2021 # Report_file: c_0157_9.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00082.pdb # 4: usage_00135.pdb # 5: usage_00136.pdb # 6: usage_00171.pdb # 7: usage_00172.pdb # 8: usage_00187.pdb # 9: usage_00220.pdb # 10: usage_00223.pdb # 11: usage_00224.pdb # 12: usage_00275.pdb # 13: usage_00276.pdb # 14: usage_00335.pdb # 15: usage_00432.pdb # 16: usage_00439.pdb # 17: usage_00440.pdb # 18: usage_00479.pdb # 19: usage_00497.pdb # 20: usage_00498.pdb # 21: usage_00526.pdb # 22: usage_00532.pdb # 23: usage_00566.pdb # # Length: 176 # Identity: 121/176 ( 68.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 145/176 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/176 ( 9.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00036.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 60 usage_00082.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 60 usage_00135.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00136.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 60 usage_00171.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00172.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00187.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW 59 usage_00220.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 60 usage_00223.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00224.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00275.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00276.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00335.pdb 1 GSHSMKYFYTSMSRPGRGQPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWVEQEGPEYW 60 usage_00432.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW 60 usage_00439.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW 59 usage_00440.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW 60 usage_00479.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00497.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00498.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00526.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00532.pdb 1 -SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW 59 usage_00566.pdb 1 GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW 60 SHSMrYFYTaMSRPGRGePRFIAVGYVDDTQFVRFDSDAASpR PRAPWiEQEGPEYW usage_00035.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDG 119 usage_00036.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDG 120 usage_00082.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 120 usage_00135.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00136.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 120 usage_00171.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00172.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00187.pdb 60 DRETQISKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDG 119 usage_00220.pdb 61 DGETRNMKASAQTYRENLRNARGYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 120 usage_00223.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00224.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00275.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00276.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQYAYDG 119 usage_00335.pdb 61 DRETRNMKTETQNAPVNLRTLLRYYNQSEAGSHTLQRMVGCDLGPDGRLLRGYEQYAYDG 120 usage_00432.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG 120 usage_00439.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG 119 usage_00440.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG 120 usage_00479.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDG 119 usage_00497.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00498.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00526.pdb 60 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00532.pdb 60 DGETRNMKASAQTYRENLRTALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDG 119 usage_00566.pdb 61 DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG 120 D ETrnmK QtyreNLR alrYYNQSEAGSH Q MyGCD GPDGRLLRGh Q AYDG usage_00035.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00036.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 174 usage_00082.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 174 usage_00135.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00136.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 175 usage_00171.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00172.pdb 120 KDYIALNEDLSSWTAADTAAQIIQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00187.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENG- 174 usage_00220.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGK 176 usage_00223.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00224.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00275.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00276.pdb 120 KDYIALNEDLSSWTAADTAAQIIQRKWEAARVAEQLRAYL---------------- 159 usage_00335.pdb 121 KDYIALNEDLRSWTAADVAAQNTQRKWEAADVAESMRAYLEGQCVEWLPRYLEKG- 175 usage_00432.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 174 usage_00439.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00440.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGL------------- 163 usage_00479.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00497.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEG-------------- 161 usage_00498.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00526.pdb 120 KDYIALNEDLSSWTAADTAAQIIQRKWEAARVAEQLRAYLEGLCVEWLRRYLEN-- 173 usage_00532.pdb 120 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 174 usage_00566.pdb 121 KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENG- 175 KDYIALNEDLsSWTAADtAAQi QRKWEAArvAEqlRAYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################