################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:39 2021 # Report_file: c_0255_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00008.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00029.pdb # 6: usage_00038.pdb # 7: usage_00039.pdb # # Length: 168 # Identity: 158/168 ( 94.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 158/168 ( 94.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/168 ( 3.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 TILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEAR--AL 58 usage_00008.pdb 1 TILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 60 usage_00020.pdb 1 TILDTARFRALLAEHLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 60 usage_00021.pdb 1 TILDTARFRALLAEHLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 60 usage_00029.pdb 1 TILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 60 usage_00038.pdb 1 -ILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 59 usage_00039.pdb 1 -ILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRAL 59 ILDTARFRALLAE LRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEAR AL usage_00003.pdb 59 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEG 118 usage_00008.pdb 61 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEG 120 usage_00020.pdb 61 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEG 120 usage_00021.pdb 61 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEG 120 usage_00029.pdb 61 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAG 120 usage_00038.pdb 60 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAG 119 usage_00039.pdb 60 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAG 119 SPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEV G usage_00003.pdb 119 VLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFALG 166 usage_00008.pdb 121 VLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFALG 168 usage_00020.pdb 121 VLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFALG 168 usage_00021.pdb 121 VLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFALG 168 usage_00029.pdb 121 VLEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEAAF--- 165 usage_00038.pdb 120 VLEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEAAFALG 167 usage_00039.pdb 120 VLEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEAAFALG 167 VLEVSLSLPRILGAGGV GTVYPSLSPEER ALRRSAEILKEAAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################