################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:50 2021 # Report_file: c_1033_45.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00327.pdb # 2: usage_00385.pdb # 3: usage_00611.pdb # 4: usage_00612.pdb # # Length: 79 # Identity: 2/ 79 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 79 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 79 ( 49.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00327.pdb 1 PIQLVVAGGAE------------VI---QPDDIAEIISLAPQTTTYVVEAG--HIPWD-- 41 usage_00385.pdb 1 EIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEGRAIY----------NNMKQFIRY 49 usage_00611.pdb 1 EIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEGRAIY----------NNMKQFIRY 49 usage_00612.pdb 1 EIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEGRAIY----------NNMKQFIRY 49 eIgiamgs gt dd tivaavEegraiy mkqfi usage_00327.pdb 42 ---NLE----GFITAV-SN 52 usage_00385.pdb 50 LISSNVGEVVCIFLTAAL- 67 usage_00611.pdb 50 LISSNVGEVVCIFLTAALG 68 usage_00612.pdb 50 LISSNVGEVVCIFLTAALG 68 snv ciflta l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################