################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:08 2021 # Report_file: c_1404_150.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00254.pdb # 2: usage_00261.pdb # 3: usage_00281.pdb # # Length: 71 # Identity: 2/ 71 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 71 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 71 ( 54.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00254.pdb 1 NLLKEEKQRAKLQK-LPKLEEELKARIE-LWEQEHSKAFVNG----QKFEYVAEQ-WE-H 52 usage_00261.pdb 1 -LLKEEKQRAKLQKMLPKLEEELKARIE-LWEQEHSKAFM--VNGQKFMEYVAEQ-WEMH 55 usage_00281.pdb 1 -RNTLAAMLIRELR-A---ALELFEQEGL------------------------APYLS-R 30 llkeekqraklqk l eeELkarie eq we h usage_00254.pdb 53 RLEKE------ 57 usage_00261.pdb 56 RLEKERAKQER 66 usage_00281.pdb 31 WEKL------- 34 rlek #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################