################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:33:50 2021 # Report_file: c_0171_3.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00046.pdb # 8: usage_00055.pdb # 9: usage_00066.pdb # 10: usage_00098.pdb # 11: usage_00139.pdb # 12: usage_00197.pdb # 13: usage_00198.pdb # 14: usage_00240.pdb # 15: usage_00241.pdb # 16: usage_00242.pdb # 17: usage_00243.pdb # 18: usage_00244.pdb # 19: usage_00245.pdb # 20: usage_00254.pdb # 21: usage_00256.pdb # # Length: 181 # Identity: 37/181 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/181 ( 33.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/181 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00013.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00014.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00020.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00021.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00022.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00046.pdb 1 -YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 59 usage_00055.pdb 1 DFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTA 60 usage_00066.pdb 1 -RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTA 59 usage_00098.pdb 1 DFLFKLVLVGDASVGKTCVVQRFKTGAF----------DFTMKTLEIQGKRVKLQIWDTA 50 usage_00139.pdb 1 -TTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 59 usage_00197.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00198.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00240.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00241.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00242.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00243.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00244.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00245.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00254.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 usage_00256.pdb 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60 fK iG VGK cl RF DF t G KlqiWDTA usage_00012.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00013.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00014.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00020.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00021.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00022.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00046.pdb 60 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 115 usage_00055.pdb 61 GQE-RFRS-ITQSYYRSANALILTYDITCEESFRCLPEWLREIEQ-Y-ASNKVITVLVGN 116 usage_00066.pdb 60 GQE-RFRKSMVQHYYRNVHAVVFVYD-TN-ASFHSLPAWIEECKQHLL-ANDIPRILVGN 115 usage_00098.pdb 51 -GQERFRT-ITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRK-Y-AGSNIVQLLIGN 106 usage_00139.pdb 60 GQE-RFRT-LTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELET-Y-CTRNDIVNLVGN 115 usage_00197.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00198.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-A-SNVNKLLVGN 115 usage_00240.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00241.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00242.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00243.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00244.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00245.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00254.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 usage_00256.pdb 61 GQE-RFRT-ITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-Y-ASENVNKLLVGN 116 qe RFR t sYYR a i YD T s W e y LvGN usage_00012.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRMG--- 169 usage_00013.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 168 usage_00014.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 168 usage_00020.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRMGLEV 172 usage_00021.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRMGLEV 172 usage_00022.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRMGLEV 172 usage_00046.pdb 116 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKKR----- 166 usage_00055.pdb 117 KIDLAERREVSQQRAEEFSEAQDM-YYLETSAKE---SDNVEKLFLDLACRLISEAR--- 169 usage_00066.pdb 116 KCDLRSAIQVPTDLAQKFADTHS--PLFETSAKNPNDNDHVEAIFT-------------- 159 usage_00098.pdb 107 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKD---SSNVEEAFLRVATELIMRH---- 159 usage_00139.pdb 116 KIDK-ENREVDRNEGLKFARKHS--LFIEASAKT---CDGVQCAFEELVEKIIQT----- 164 usage_00197.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 168 usage_00198.pdb 116 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 167 usage_00240.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKKRM---- 168 usage_00241.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKKRM---- 168 usage_00242.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKKRM---- 168 usage_00243.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKKRM---- 168 usage_00244.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKK------ 166 usage_00245.pdb 117 KCDLTTKKVVDYTTAKEFADSLGI-PFLETSAKN---ATNVEQSFMTMAAEIKK------ 166 usage_00254.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 168 usage_00256.pdb 117 KSDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN---ATNVEQAFMTMAAEIKKRM---- 168 K Dl V a fa EtSAK Ve F usage_00012.pdb - usage_00013.pdb - usage_00014.pdb - usage_00020.pdb 173 L 173 usage_00021.pdb 173 L 173 usage_00022.pdb 173 L 173 usage_00046.pdb - usage_00055.pdb - usage_00066.pdb - usage_00098.pdb - usage_00139.pdb - usage_00197.pdb - usage_00198.pdb - usage_00240.pdb - usage_00241.pdb - usage_00242.pdb - usage_00243.pdb - usage_00244.pdb - usage_00245.pdb - usage_00254.pdb - usage_00256.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################