################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:02 2021 # Report_file: c_1284_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00082.pdb # 2: usage_00176.pdb # 3: usage_00177.pdb # 4: usage_00178.pdb # 5: usage_00179.pdb # 6: usage_00180.pdb # 7: usage_00181.pdb # 8: usage_00182.pdb # 9: usage_00252.pdb # 10: usage_00274.pdb # 11: usage_00381.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 51 ( 3.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 51 ( 43.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 ----AA-VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG--- 43 usage_00176.pdb 1 ------AGILLGPVEDADTTDWTRIDTNLLG-L--YTRAALPHLLRS---- 38 usage_00177.pdb 1 ------AGILLGPVEDADTTDWTRIDTNLLG-L--YTRAALPHLLRS---- 38 usage_00178.pdb 1 ------AGILLGPVEDADTTDWTRIDTNLLG-L--YTRAALPHLLRS---- 38 usage_00179.pdb 1 ----AG-IMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---- 42 usage_00180.pdb 1 ----AG-IMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---- 42 usage_00181.pdb 1 ----AG-IMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---- 42 usage_00182.pdb 1 ----AG-IMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---- 42 usage_00252.pdb 1 AGGL----VGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS 47 usage_00274.pdb 1 -------RTQVGAFEETTERELRDLFELHVFGPARLTRAL----------- 33 usage_00381.pdb 1 ----AG-IYQAKPFAEMSDADWHRTISINLDGVFYLCKRALPAL------- 39 p a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################