################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:33 2021 # Report_file: c_1048_31.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00042.pdb # 2: usage_00281.pdb # 3: usage_00285.pdb # 4: usage_00286.pdb # 5: usage_00316.pdb # 6: usage_00343.pdb # 7: usage_00481.pdb # 8: usage_00578.pdb # 9: usage_00591.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 38 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 38 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 ---LLINAS----RGTVVDIPALADALASKHLAGAAID 31 usage_00281.pdb 1 --AFLVNAA----RGGLVDEKALAQALKEGRIRGAALD 32 usage_00285.pdb 1 --QYKSFAIGSPEGFE--LAEKSIYAAAKSG-TWVLLK 33 usage_00286.pdb 1 ---FLVNTA----RGGLVDEKALAQALKEGRIRGAALD 31 usage_00316.pdb 1 -TAVLVNVA----RGKVVDTKALIRALKEGWIAAAGLD 33 usage_00343.pdb 1 ---ILINTS----RGPVVDTNALVKALKEGWIAGAGLD 31 usage_00481.pdb 1 PVRVGVAGG----E-N--KAEAIAAAMKGGYINALVT- 30 usage_00578.pdb 1 --AILINAA----RGELVDTAALIEALEKHEIAAAGLD 32 usage_00591.pdb 1 --AILINAC----RGPVVDNAALLARLNAGQPLSVVLD 32 a a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################