################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:30 2021 # Report_file: c_0582_29.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00049.pdb # 2: usage_00052.pdb # 3: usage_00068.pdb # 4: usage_00141.pdb # 5: usage_00142.pdb # 6: usage_00158.pdb # 7: usage_00160.pdb # 8: usage_00165.pdb # 9: usage_00176.pdb # # Length: 84 # Identity: 7/ 84 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 84 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 84 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 --TVKLRGAPFNVTEKNVMEFLAPL--K-PV----AIRIVRNAHGNKTGYIFVDFSNEEE 51 usage_00052.pdb 1 -VIVRMRGLPFTATAEEVVAFFGQH--CPITGGKEGILFVTYPDGRPTGDAFVLFACEEY 57 usage_00068.pdb 1 --CIRLRGLPYAATIEDILDFLGEFATD-IR--THGVHMVLNHQGRPSGDAFIQMKSADR 55 usage_00141.pdb 1 --VVKLRGLPWSCSVEDVQNFLSDC--T-IHDGAAGVHFIYTREGRQSGEAFVELGSEDD 55 usage_00142.pdb 1 -GFVRLRGLPFGCTKEEIVQFFSGL--E-IV--PNGITLPVDPEGKITGEAFVQFASQEL 54 usage_00158.pdb 1 -FCVYLKGLPFEAENKHVIDFFKKL--D-IV--EDSIYIAYGPNGKATGEGFVEFRNEAD 54 usage_00160.pdb 1 DGFVRLRGLPFGCSKEEIVQFFSGL--E-IV--PNGMTLPVDFQGRSTGEAFVQFASQEI 55 usage_00165.pdb 1 --FVRLRGLPFGCTKEEIVQFFSGL--E-IV--PNGITLPVDPEGKITGEAFVQFASQEL 53 usage_00176.pdb 1 ---IRAQGLPWSCTMEDVLNFFSDC--R-IRNGENGIHFLLNRDGKRRGDALIEMESEQD 54 GlP F i G G f usage_00049.pdb 52 VKQALK-CNREYMGGRYIEVFR-- 72 usage_00052.pdb 58 AQNALR-KHKDLLGKRYIELFR-- 78 usage_00068.pdb 56 AFMAAQKCHKKNMKDRYVEVFQCS 79 usage_00141.pdb 56 VKMALK-KDRESMGHRYIEVFK-- 76 usage_00142.pdb 55 AEKALG-KHKERIGHRYIEVFK-- 75 usage_00158.pdb 55 YKAALC-RHKQYMGNRFIQVH--- 74 usage_00160.pdb 56 AEKALK-KHKERIGHRYIEIFK-- 76 usage_00165.pdb 54 AEKALG-KHKERIGHRYIEVF--- 73 usage_00176.pdb 55 VQKALE-KHRMYMGQRYVEVY--- 74 Al g Ry e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################