################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:03 2021 # Report_file: c_1377_44.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00328.pdb # 2: usage_00710.pdb # 3: usage_00908.pdb # 4: usage_00993.pdb # 5: usage_00994.pdb # 6: usage_01258.pdb # 7: usage_01304.pdb # 8: usage_01305.pdb # 9: usage_01383.pdb # # Length: 55 # Identity: 1/ 55 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 55 ( 12.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 55 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00328.pdb 1 -QQEAALVDMVNDGVEDLRCKYISLIVTNYEAGKDDYVKALPGQLKPFETLLSQN 54 usage_00710.pdb 1 ----------YPFVEALYRYQVGLLLE-APQAHRAPLVQAL-ATVEELDWLLLQG 43 usage_00908.pdb 1 --SKMLSIINKRIVLKSISMMKGLKETGG-DKWTKF----LNTFGKYLKIGVVED 48 usage_00993.pdb 1 DQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQN 55 usage_00994.pdb 1 -QQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQN 54 usage_01258.pdb 1 -QQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQN 54 usage_01304.pdb 1 -QQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQ- 53 usage_01305.pdb 1 -QQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQ- 53 usage_01383.pdb 1 -QREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYVKALPGHLKPFETLLSQN 54 r l L k ll q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################