################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:57 2021 # Report_file: c_1119_34.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00018.pdb # 2: usage_00020.pdb # 3: usage_00068.pdb # 4: usage_00257.pdb # 5: usage_00284.pdb # 6: usage_00350.pdb # # Length: 106 # Identity: 8/106 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/106 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/106 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 ----GTIFDRVLTELVAKMRDMKMDKTELGCLRAIVLFNPDA-KGLTDPSLVESLREKVY 55 usage_00020.pdb 1 LTLIISEIQALQE-VVARFRQLRLDATEFACLKCIVTFKAVPLRSFRNAAAIAALQDEAQ 59 usage_00068.pdb 1 ----GQIFDRVLSELSLKMRTLRVDQAEYVALKAIILLNPDV-KGLKNRQEVEVLREKMF 55 usage_00257.pdb 1 ---SDEYITPMFS-FYKSIGELKMTQEEYALLTAIVILSPDR-QYIKDREAVEKLQEPLL 55 usage_00284.pdb 1 -ATLNNLMSHAQE-LVAKLRSLQFDQREFVCLKFLVLFSLDV-KNLENFQLVEGVQEQVN 57 usage_00350.pdb 1 ---------------VSKMRDMQMDKTELGCLRAIVLFNPDS-KGLSNPAEVEALREKVY 44 r d E L iv d ve l e usage_00018.pdb 56 ASLEEYCKQQYPEQPGRFAKLLLRLPALRSIGLKCLEH-------- 93 usage_00020.pdb 60 LTLNSYIHTRYPTQPVRFGKLLLLLPALRS---------------- 89 usage_00068.pdb 56 LCLDEYCRRSRSSEEGRFAALLLRLPALRSISLKSFEHLFFFH--- 98 usage_00257.pdb 56 DVLQKLCKIHQPENPQHFACLLGRLTELRTFNHH------------ 89 usage_00284.pdb 58 AALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNG 103 usage_00350.pdb 45 ASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL-- 88 L y p F LLlrLp lR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################