################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:55 2021 # Report_file: c_0989_38.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00258.pdb # 2: usage_00348.pdb # 3: usage_00360.pdb # 4: usage_00361.pdb # 5: usage_00881.pdb # 6: usage_00882.pdb # 7: usage_01110.pdb # # Length: 78 # Identity: 7/ 78 ( 9.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 78 ( 34.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 78 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 -LRMAEFGSCHRNEP------SGS-LHGLMRVRGFTQDDAHIFCTEE--QIRDEVNGCIR 50 usage_00348.pdb 1 PLRYAGYAPAFRSEAGSFGKD----VRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLE 56 usage_00360.pdb 1 -IKYAGLSTCFRQE-------VG--SRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIT 50 usage_00361.pdb 1 -IKYAGLSTCFRQE-------V---TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIT 49 usage_00881.pdb 1 PVRYAGYSSCFRRE-------AG--AWGIFRVHAFEKIEQFVLTEPE--KSWEEFDRMIG 49 usage_00882.pdb 1 PVRYAGYSSCFRREAGS-HG---KDAWGIFRVHAFEKIEQFVLTEPE--KSWEEFDRMIG 54 usage_01110.pdb 1 PVRYAGYSSCFRRE-------AG--AWGIFRVHAFEKIEQFVLTEPE--KSWEEFDRMIG 49 yAg cfR E G RVh F k eq v s f i usage_00258.pdb 51 LVYDMYSTFGFEKIVVKL 68 usage_00348.pdb 57 NAEEILRLLEL-PYRLVE 73 usage_00360.pdb 51 TAEEFYQSLGI-PYHIVN 67 usage_00361.pdb 50 TAEEFYQSLGI-PYHIVN 66 usage_00881.pdb 50 CSEEFYQSLGL-PYRVVG 66 usage_00882.pdb 55 CSEEFYQSLGL-PYRVVG 71 usage_01110.pdb 50 CSEEFYQSLGL-PYRVVG 66 ee y lg py v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################