################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:57 2021 # Report_file: c_0849_71.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00258.pdb # 2: usage_00506.pdb # 3: usage_00533.pdb # 4: usage_00591.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 76 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 76 ( 65.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 NKTQEEHLKEIMKHIVKIE--VKGEEAVK-----------KEAAEKLLEKVP--SDVLEM 45 usage_00506.pdb 1 ------DANYIKELRKM--LDYQG-----LQRVRIIASDN---LWEPISSSLLL-DQELW 43 usage_00533.pdb 1 ------TFEQAQKKD---------------RHYEMS-SM-VETQALNKLKD---NPEDFV 34 usage_00591.pdb 1 -KTQEEHLKEIMKHIVKIE--VKGEEAVK-----------KEAAEKLLEKVP--SDVLEM 44 i k k d usage_00258.pdb 46 YKAIGGKIY-----I- 55 usage_00506.pdb 44 KVVD-----VIGAH-- 52 usage_00533.pdb 35 DYNKK----QLTRIYP 46 usage_00591.pdb 45 YKAIGGKIY-----I- 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################