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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:14:55 2021
# Report_file: c_0782_16.html
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#====================================
# Aligned_structures: 14
#   1: usage_00005.pdb
#   2: usage_00091.pdb
#   3: usage_00093.pdb
#   4: usage_00094.pdb
#   5: usage_00095.pdb
#   6: usage_00096.pdb
#   7: usage_00099.pdb
#   8: usage_00100.pdb
#   9: usage_00101.pdb
#  10: usage_00102.pdb
#  11: usage_00218.pdb
#  12: usage_00224.pdb
#  13: usage_00225.pdb
#  14: usage_00286.pdb
#
# Length:         63
# Identity:       22/ 63 ( 34.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/ 63 ( 47.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            8/ 63 ( 12.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  -REDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNV   59
usage_00091.pdb         1  IRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   60
usage_00093.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00094.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00095.pdb         1  ------D-LVYTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   53
usage_00096.pdb         1  ------D-LVYTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   53
usage_00099.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00100.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00101.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00102.pdb         1  ------DLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   54
usage_00218.pdb         1  -RDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQV   59
usage_00224.pdb         1  -RKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   59
usage_00225.pdb         1  -RKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNV   59
usage_00286.pdb         1  -REDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNV   59
                                 D    Te  K  A   D  eR akGQPVL GT s E SE  S   tk  I HnV

usage_00005.pdb        60  LNA   62
usage_00091.pdb        61  LN-   62
usage_00093.pdb        55  LNA   57
usage_00094.pdb        55  LNA   57
usage_00095.pdb        54  LN-   55
usage_00096.pdb        54  LNA   56
usage_00099.pdb        55  LN-   56
usage_00100.pdb        55  LN-   56
usage_00101.pdb        55  LN-   56
usage_00102.pdb        55  LNA   57
usage_00218.pdb        60  LN-   61
usage_00224.pdb        60  LNA   62
usage_00225.pdb        60  LNA   62
usage_00286.pdb        60  LNA   62
                           LN 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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