################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:14 2021 # Report_file: c_0977_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00050.pdb # 2: usage_00076.pdb # 3: usage_00081.pdb # 4: usage_00100.pdb # 5: usage_00103.pdb # 6: usage_00104.pdb # 7: usage_00105.pdb # 8: usage_00106.pdb # 9: usage_00122.pdb # 10: usage_00169.pdb # # Length: 72 # Identity: 3/ 72 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 72 ( 9.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 72 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 -QVGVAGAVF--------DESTRKILVVQ-DR-N-K---LKN-M-WKFPGGLSEPEEDIG 43 usage_00076.pdb 1 -VVGAGALVI--------NKNTKEVLVVQ-ED-K--------NV-WKLPTGVINEGEDIW 40 usage_00081.pdb 1 KKEFSAGGVL--------FK-DGEVLLIK-TP-------S-N-V-WSFPKGNIEPGEKPE 40 usage_00100.pdb 1 --LAFSSWLF--------NA-KGQLLVTR-RA-LSKKAWP-G-VWTNSVCGHPQLGESNE 45 usage_00103.pdb 1 -ELGAGGVVF--------NA-KREVLLLR-DR-------M-G-F-WVFPKGHPEPGESLE 39 usage_00104.pdb 1 -ELGAGGVVF--------NA-KREVLLLR-DR-------M-G-F-WVFPKGHPEPGESLE 39 usage_00105.pdb 1 -ELGAGGVVF--------NA-KREVLLLR-DR-------M-G-F-WVFPKGHPEPGESLE 39 usage_00106.pdb 1 -ELGAGGVVF--------NA-KREVLLLR-DR-------M-G-F-WVFPKGHPEPGESLE 39 usage_00122.pdb 1 -----GIVIC--------NR-QGQVMWAR-RF-G-----Q-H-S-WQFPQGGINPGESAE 36 usage_00169.pdb 1 ----------ELVTVVTDPE-TQRVLVEDKVNVP-W---K-A-G-HSFPGGHVEVGEPCA 42 l p G gE usage_00050.pdb 44 DTAVREVFEE-- 53 usage_00076.pdb 41 TGVAREVEEETG 52 usage_00081.pdb 41 ETAVREVWEETG 52 usage_00100.pdb 46 DAVIRRCRYELG 57 usage_00103.pdb 40 EAAVREVWEETG 51 usage_00104.pdb 40 EAAVREVWEETG 51 usage_00105.pdb 40 EAAVREVWEQTG 51 usage_00106.pdb 40 EAAVREVWEQTG 51 usage_00122.pdb 37 QAMYRALFEEVG 48 usage_00169.pdb 43 TAAIREVFEETG 54 R e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################