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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:55:06 2021
# Report_file: c_1408_39.html
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#====================================
# Aligned_structures: 17
#   1: usage_00010.pdb
#   2: usage_00011.pdb
#   3: usage_00089.pdb
#   4: usage_00092.pdb
#   5: usage_00093.pdb
#   6: usage_00217.pdb
#   7: usage_00538.pdb
#   8: usage_00539.pdb
#   9: usage_00540.pdb
#  10: usage_01105.pdb
#  11: usage_01106.pdb
#  12: usage_01161.pdb
#  13: usage_01162.pdb
#  14: usage_01163.pdb
#  15: usage_01240.pdb
#  16: usage_01290.pdb
#  17: usage_01490.pdb
#
# Length:         80
# Identity:       18/ 80 ( 22.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     47/ 80 ( 58.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 80 ( 26.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00010.pdb         1  SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   60
usage_00011.pdb         1  SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   60
usage_00089.pdb         1  SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   60
usage_00092.pdb         1  -KRQIQSAYSILNEVQQAVSDGGSESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAK   59
usage_00093.pdb         1  -KRQIQSAYSILNEVQQAVSDGGSESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAK   59
usage_00217.pdb         1  -KRQIQSAYSILNEVQQAVSDGGSESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAK   59
usage_00538.pdb         1  -VAQIKAGYQSLKKIEDCIRAGQHGRALMEACNEFYTRIPHDFGLRTPPLIRTQKELSEK   59
usage_00539.pdb         1  --RQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   58
usage_00540.pdb         1  SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHD-----PPLLNNADSVQAK   55
usage_01105.pdb         1  --RQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   58
usage_01106.pdb         1  --RQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   58
usage_01161.pdb         1  ---QIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   57
usage_01162.pdb         1  ---QIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   57
usage_01163.pdb         1  SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   60
usage_01240.pdb         1  -KRQIQSAYSILNEVQQAVSDGGSESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAK   59
usage_01290.pdb         1  -KRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHD------PLLNNADSVQAK   53
usage_01490.pdb         1  --RQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAK   58
                              QIq aYsiL evqqavs G s sqildlsNrFYTlIPHD      PLl n    qaK

usage_00010.pdb        61  AEMLDNLLDIEVAYSLL---   77
usage_00011.pdb        61  AEMLDNLLDIEVAYSLLRG-   79
usage_00089.pdb        61  AEMLDNLLDIEVAYSLLRG-   79
usage_00092.pdb        60  VQMLDNLL------------   67
usage_00093.pdb        60  VQMLDNLL------------   67
usage_00217.pdb        60  VQMLDNLL------------   67
usage_00538.pdb        60  IQLLEALGDIEIAIKLV---   76
usage_00539.pdb        59  VEMLDNLLDIEVAYSLLR--   76
usage_00540.pdb        56  VEMLDNLLDIEVAYSLLRG-   74
usage_01105.pdb        59  AEMLDNLLDIEVAYSLLRG-   77
usage_01106.pdb        59  AEMLDNLLDIEVAYSLLRG-   77
usage_01161.pdb        58  AEMLDNLLDIEVAYSLLRG-   76
usage_01162.pdb        58  AEMLDNLLDIEVAYSLLR--   75
usage_01163.pdb        61  AEMLDNLLDIEVAYSLLRG-   79
usage_01240.pdb        60  VQMLDNLL------------   67
usage_01290.pdb        54  AEMLDNLLDIEVAYSLL---   70
usage_01490.pdb        59  VEMLDNLLDIEVAYSLLRGG   78
                             mLdnLl            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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