################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:04 2021 # Report_file: c_1132_52.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00015.pdb # 2: usage_00024.pdb # 3: usage_00032.pdb # 4: usage_00390.pdb # 5: usage_00416.pdb # 6: usage_00483.pdb # 7: usage_00576.pdb # 8: usage_00577.pdb # 9: usage_00626.pdb # 10: usage_00650.pdb # 11: usage_00694.pdb # 12: usage_00728.pdb # # Length: 106 # Identity: 12/106 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/106 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/106 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTRP-FSEASMM----GLLTNLADRE 43 usage_00024.pdb 1 TADQMVSALLDAE------------PPILYSEY--R--PFSEASMM----GLLTNLADRE 40 usage_00032.pdb 1 -MSAFWYAVRTAVINAASGRQTVDE---------------ALKDAQTNAAAEFPSAICES 44 usage_00390.pdb 1 TADQMVSALLDAE------------PPILYSE--------SEASMM----GLLTNLADRE 36 usage_00416.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTRP-FSEASMM----GLLTNLADRE 43 usage_00483.pdb 1 TADQMVSALLDAE------------PPILYSEYDPT---FSEASMM----GLLTNLADRE 41 usage_00576.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTR-PFSEASMM----GLLTNLADRE 43 usage_00577.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTR-PFSEASMM----GLLTNLADRE 43 usage_00626.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTR-PFSEASMM----GLLTNLADRE 43 usage_00650.pdb 1 TADQMVSALLDAE------------PPILYSEYDP-R--PFSASMM----GLLTNLADRE 41 usage_00694.pdb 1 TADQMVSALLDAE------------PPILYSEYDPTR-PFSEASMM----GLLTNLADRE 43 usage_00728.pdb 1 TADQMVSALLDAE------------PPILYSE-------FSEASMM----GLLTNLADRE 37 adqmvsAlldAe asmm glltnladre usage_00015.pdb 44 LVHMINWAK---RV-PGFVDLTLHDQVHLLECA------------- 72 usage_00024.pdb 41 LVHMINWAK---RV-PGFVDLTLHDQVHLLECAW------------ 70 usage_00032.pdb 45 AAQLIFMNVQWVRSIPAFTCLPLSDQLLLLEESWLDLFVLGAA-Q- 88 usage_00390.pdb 37 LVHMINWAK---RV-PGFVDLTLHDQVHLLECAW------------ 66 usage_00416.pdb 44 LVHMINWAK---RV-PGFVDLTLHDQVHLLECA------------- 72 usage_00483.pdb 42 LVHMINWAK---RV-PGFVDLTLHDQVHLLECAWLEILMIGLVWRS 83 usage_00576.pdb 44 LVHMINWAK---RV-PGFVDLTRHDQVHLLECAWLEILMIGLVWRS 85 usage_00577.pdb 44 LVHMINWAK---RV-PGFVDLTRHDQVHLLECAWLEILMIGLVWRS 85 usage_00626.pdb 44 LVHMINWAK---RV-PGFVDLTLHDQVHLLECAWLEILMIGLVWRS 85 usage_00650.pdb 42 LVHMINWAK---RV-PGFVDLTLHDQVHLLECA------------- 70 usage_00694.pdb 44 LVHMINWAK---RV-PGFVDLTLHDQVHLLESA------------- 72 usage_00728.pdb 38 LVHMINWAK---RV-PGFVDLTLHDQVHLLECA------------- 66 lvhmInwak Rv PgFvdLt hDQvhLLE a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################