################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:05 2021 # Report_file: c_0875_135.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00019.pdb # 2: usage_00348.pdb # 3: usage_00357.pdb # 4: usage_00372.pdb # 5: usage_00398.pdb # 6: usage_00436.pdb # 7: usage_00512.pdb # 8: usage_00835.pdb # 9: usage_00935.pdb # 10: usage_00979.pdb # # Length: 110 # Identity: 0/110 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/110 ( 0.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/110 ( 43.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 ---SAEAWYNLGNAYYK---Q-GDYDEAIEYYQKALELD-----PNNAEAWYNLGNAYYK 48 usage_00348.pdb 1 -----EAWYNLGNAYYK---Q-GDYDEAIEYYQKALELY-----PNNAEAWYNLGNAYYK 46 usage_00357.pdb 1 QPVALSCVLNIGACKLK---M-SDWQGAVDSCLEALEID-----PSNTKALYRRAQGWQG 51 usage_00372.pdb 1 ----ADLYFEAATALTR---A-EKYKEAIDFFTPLLSLEEW----RTTDVFKPLARCYKE 48 usage_00398.pdb 1 ----PEAVARLGRVRWT---Q-QRHAEAAVLLQQASDAA-----PEHPGIALWLGHALED 47 usage_00436.pdb 1 ------EEYYLEGVLQY---DAGNYTESIDLFEKAIQLD-----PEESKYWLMKGKALYN 46 usage_00512.pdb 1 ------AWKNLGNAYYK---Q-GDYQKAIEYYQKALELD-----PNNASAWYNLGNAYYK 45 usage_00835.pdb 1 --PQADAWYREAVALAKPDTL-RPWDRIVDLYSKAVE-R-----G-HWKAMHNLASLYRT 50 usage_00935.pdb 1 -----PLLNNLGHVCRK---L-KKYAEALDYHRQALVLI-----PQNASTYSAIGYIHSL 46 usage_00979.pdb 1 -------WSQLAKAQLQ---K-G-M-VKEAIDSYIKA----DDP-S---SYMEVVQAANT 39 usage_00019.pdb 49 Q-GDYDEAIEYYQKALE-L-DPNNAEAKQNLGNAKQKQ------------ 83 usage_00348.pdb 47 Q-GDYDEAIEYYQKALE-L-YPNNAEAWYNLGNAYYKQG----------- 82 usage_00357.pdb 52 L-KEYDQALADLKKAQE-I-APEDKAIQAELLKVKQKIKAQKDKEK---- 94 usage_00372.pdb 49 I-ESYETAKEFYELAIK-S-EP-DDLDIRVSLAEVYYR------------ 82 usage_00398.pdb 48 A-GQAEAAAAAYTRAHQ-L-LPEEPYITAQLLNWRRRLC----------- 83 usage_00436.pdb 47 L-ERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR-------------- 81 usage_00512.pdb 46 Q-GDYQKAIEYYQKALE-L-DPNNAKAWYRRGNAYYKQG----------- 81 usage_00835.pdb 51 GWKDTQKALDLYQKMID-L--K-VPQGFYDMAAM---------------- 80 usage_00935.pdb 47 --GNFENAVDYFHTALG-L-RRDDTFSVTL-GHCIE----------YIGD 81 usage_00979.pdb 40 S-GNWEELVKYLQMARK-K-AR-ESYVETELIFALA-------------- 71 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################