################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:46:49 2021 # Report_file: c_0296_3.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00044.pdb # 11: usage_00045.pdb # 12: usage_00146.pdb # 13: usage_00147.pdb # 14: usage_00148.pdb # 15: usage_00161.pdb # 16: usage_00198.pdb # 17: usage_00199.pdb # # Length: 137 # Identity: 70/137 ( 51.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/137 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/137 ( 0.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00002.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00003.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00004.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00005.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00006.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00007.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00008.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00009.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00044.pdb 1 KLGINGFGRIGRLVFRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSHKD 60 usage_00045.pdb 1 KLGINGFGRIGRLVFRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSHKD 60 usage_00146.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00147.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00148.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00161.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 60 usage_00198.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAEN 60 usage_00199.pdb 1 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAEN 60 K G NGFGRIGRLV RAA G V AINDPF L YMVY YDS HG G V usage_00001.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00002.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00003.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00004.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00005.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00006.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00007.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00008.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00009.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00044.pdb 61 GKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIMSAP 120 usage_00045.pdb 61 GKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIMSAP 120 usage_00146.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00147.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00148.pdb 61 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 120 usage_00161.pdb 61 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAP 120 usage_00198.pdb 61 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAP 120 usage_00199.pdb 61 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAP 120 GKL G T F E P I WG AG Y ESTG F T EKA AHL GAK VI SAP usage_00001.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00002.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00003.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00004.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00005.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00006.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00007.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00008.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00009.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00044.pdb 121 PKDDTPMFVMGVNNDQY 137 usage_00045.pdb 121 PKDDTPMFVMGVNNDQY 137 usage_00146.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00147.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00148.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00161.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00198.pdb 121 SADAPMFVMGVNHEKY- 136 usage_00199.pdb 121 SADAPMFVMGVNHEKY- 136 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################