################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:51 2021 # Report_file: c_0942_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00014.pdb # 2: usage_00017.pdb # 3: usage_00087.pdb # 4: usage_00179.pdb # 5: usage_00225.pdb # 6: usage_00226.pdb # 7: usage_00228.pdb # 8: usage_00229.pdb # 9: usage_00230.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 57 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 57 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -DLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQK-- 46 usage_00017.pdb 1 RDLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQKSG 49 usage_00087.pdb 1 --PVGAVRIGIIDGEYVVNPTRKEMSS--------STLNLVVAGAPKSQIVMLEAS- 46 usage_00179.pdb 1 ---TGVTVNVTHNGVTDIY--------QATAWNDGNYTLSVTVVDRAGNSQ--QS-- 42 usage_00225.pdb 1 -DLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQK-- 46 usage_00226.pdb 1 RDLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQK-- 47 usage_00228.pdb 1 -DLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQKS- 47 usage_00229.pdb 1 RDLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQK-- 47 usage_00230.pdb 1 RDLPVSVTSLIVGNKYLVDPSREEMSV--------GDTTLTITTDKDDNVVAMQK-- 47 v i y v t l d n v q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################