################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:10:34 2021 # Report_file: c_0224_5.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00046.pdb # 7: usage_00057.pdb # 8: usage_00058.pdb # 9: usage_00081.pdb # 10: usage_00123.pdb # 11: usage_00124.pdb # 12: usage_00125.pdb # 13: usage_00126.pdb # 14: usage_00127.pdb # 15: usage_00133.pdb # 16: usage_00150.pdb # 17: usage_00151.pdb # 18: usage_00152.pdb # 19: usage_00165.pdb # # Length: 151 # Identity: 14/151 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/151 ( 19.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/151 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 FPLMIKATS-------RIVREESELEDAFHRAKSEAEKS-----EVYIERYI---DNPKH 45 usage_00010.pdb 1 -PLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 55 usage_00040.pdb 1 -PIIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSD-EVYVEKLI---ENPKH 55 usage_00041.pdb 1 -PIIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAK-------EVYVEKLI---ENPKH 49 usage_00042.pdb 1 -PVMLKAS-------MRVIRSEADLAKEVT--------F-GKD-EVYLEKLV---ERARH 39 usage_00046.pdb 1 -PLMIKATS-------RIVREESELEDAFHRAKSEAEKS-----EVYIERYI---DNPKH 44 usage_00057.pdb 1 -PVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNG-GLYMEKFI---ENFRH 55 usage_00058.pdb 1 -PVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNG-GLYMEKFI---ENFRH 55 usage_00081.pdb 1 -PVLLKATAGGGGRGIRICRNEEELVKNYEQASREAEKAFGRG-DLLL-EKFIENPKHIE 57 usage_00123.pdb 1 -PLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 55 usage_00124.pdb 1 -PLMIKAS--------RVVESKEHVKESFERASSEAKAAFGND-EVYVEKCV---MNPKH 47 usage_00125.pdb 1 -PLMIKASL-------RVVESKEHVKESFERASSEAKAAFGND-EVYVEKCV---MNPKH 48 usage_00126.pdb 1 -PLMIKAS--------RVVESKEHVKESFERASSEAKAAFGND-EVYVEKCV---MNPKH 47 usage_00127.pdb 1 ---MIKASL-------RVVESKEHVKESFERASSEAKAAFGND-EVYVEKCV---MNPKH 46 usage_00133.pdb 1 -PVILKAAAGGGGRG-RVVENEKDLEKAYWSAESEAT-AFGDGT---YEKYI---QNPRH 51 usage_00150.pdb 1 -PLMIKATS-------RIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 48 usage_00151.pdb 1 -PLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 55 usage_00152.pdb 1 FPLMIKATS-------RIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 49 usage_00165.pdb 1 -PLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNS-EVYIERYI---DNPKH 55 KA R h usage_00009.pdb 46 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 99 usage_00010.pdb 56 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 109 usage_00040.pdb 56 IEVQILGDYEGNIVHLYE-RDCSVQ-RRHQKVVEVAPSVSL----SDELRQRICEAAVQL 109 usage_00041.pdb 50 IEVQILGDYEGNIVHLYE-RDCSVQ-RRHQKVVEVAPSVSL----SDELRQRICEAAVQL 103 usage_00042.pdb 40 VESQILGDTHGNVVHLFE-RDCSVQ-RRNQKVVERAPAPYL----SEAQRQELAAYSLKI 93 usage_00046.pdb 45 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 98 usage_00057.pdb 56 IEIQIVGDSYGNVIHLGE-RDCTIQ-RRMQKLVEEAPSPIL----DDETRREMGNAAVRA 109 usage_00058.pdb 56 IEIQIVGDSYGNVIHLGE-RDCTIQ-RRMQKLVEEAPSPIL----DDETRREMGNAAVRA 109 usage_00081.pdb 58 YQVLGDK----HGNVIHLGERDCSIQRRNQKLVEIAPSLILTPEKREYYGNIVTKAAKEI 113 usage_00123.pdb 56 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 109 usage_00124.pdb 48 IEVQILGDTHGNIVHLFE-RDCSIQ-RRHQKVVEVAPCNAI----TSELRNRICDAAVKL 101 usage_00125.pdb 49 IEVQILGDTHGNIVHLFE-RDCSIQ-RRHQKVVEVAPCNAI----TSELRNRICDAAVKL 102 usage_00126.pdb 48 IEVQILGDTHGNIVHLFE-RDCSIQ-RRHQKVVEVAPCNAI----TSELRNRICDAAVKL 101 usage_00127.pdb 47 IEVQILGDTHGNIVHLFE-RDCSIQ-RRHQKVVEVAPCNAI----TSELRNRICDAAVKL 100 usage_00133.pdb 52 IEVQVIGDSFGNVIHVGE-RDCS-Q-RRHQKLIEESPAILL----DEKTRTRLHETAIKA 104 usage_00150.pdb 49 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 102 usage_00151.pdb 56 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 109 usage_00152.pdb 50 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 103 usage_00165.pdb 56 IEVQVIGDEHGNIVHLFE-RDCSVQ-RRHQKVVEVAPSVGL----SPTLRQRICDAAIQL 109 e q g n h e rdc q RR QK vE aP r a usage_00009.pdb 100 MENIKYVNAGTVEFLVSGDEFF--FIEVNPR 128 usage_00010.pdb 110 MENIKYVNAGTVEFLVSGDEFF--FIEVNPR 138 usage_00040.pdb 110 MRSVGYVNAGTVEFLVSGDEFY--F------ 132 usage_00041.pdb 104 MRSVGYVNAGTVEFLVSGDEFY--F------ 126 usage_00042.pdb 94 AGATNYIGAGTVEYLMDADTGKFYFIEVNPR 124 usage_00046.pdb 99 MENIKYVNAGTVEFLVSGDEFF--FIEVNPR 127 usage_00057.pdb 110 AKAVNYENAGTIEFIYDLNDNK----FYF-- 134 usage_00058.pdb 110 AKAVNYENAGTIEFIYDLNDNK----FYF-- 134 usage_00081.pdb 114 G----YYNAGTMEFIADQEGNL--YF----- 133 usage_00123.pdb 110 MENIKYVNAGTVEFLVSGDEFF--F------ 132 usage_00124.pdb 102 MKNVDYINAGTVEFLVEGDDFY--F------ 124 usage_00125.pdb 103 MKNVDYINAGTVEFLVEGDDFY--F------ 125 usage_00126.pdb 102 MKNVDYINAGTVEFLVEGDDFY--F------ 124 usage_00127.pdb 101 MKNVDYINAGTVEFLVEGDDFY--F------ 123 usage_00133.pdb 105 AKAIGYEGAGTFEFLVDKNLDF--YFIENTR 133 usage_00150.pdb 103 MENIKYVNAGTVEFLVSGDEFF--FIEVNPR 131 usage_00151.pdb 110 MENIKYVNAGTVEFLVSGDEFF--F------ 132 usage_00152.pdb 104 MENIKYVNAGTVEFLVSGDEFF--F------ 126 usage_00165.pdb 110 MENIKYVNAGTVEFLVSGDEFF--F------ 132 Y AGT Ef #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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