################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:10 2021 # Report_file: c_1247_50.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00176.pdb # 2: usage_00177.pdb # 3: usage_00178.pdb # 4: usage_00179.pdb # 5: usage_00422.pdb # 6: usage_00444.pdb # 7: usage_00445.pdb # 8: usage_00446.pdb # 9: usage_00447.pdb # 10: usage_00448.pdb # 11: usage_00449.pdb # 12: usage_00450.pdb # 13: usage_00451.pdb # 14: usage_00452.pdb # 15: usage_00453.pdb # 16: usage_00454.pdb # 17: usage_00455.pdb # 18: usage_00456.pdb # 19: usage_00907.pdb # 20: usage_00908.pdb # # Length: 42 # Identity: 16/ 42 ( 38.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 42 ( 81.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 42 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00177.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00178.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00179.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00422.pdb 1 ---ILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETY---- 35 usage_00444.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00445.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00446.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00447.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00448.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00449.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00450.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTY---- 37 usage_00451.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00452.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00453.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00454.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00455.pdb 1 QPFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 42 usage_00456.pdb 1 -PFRYTSGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00907.pdb 1 -PFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 41 usage_00908.pdb 1 QPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWN 42 ry SGSIHYsRvprfyWkDrllKmKmaGLnaIqTY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################