################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 11:27:21 2021 # Report_file: c_1116_20.html ################################################################################################ #==================================== # Aligned_structures: 87 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # 14: usage_00014.pdb # 15: usage_00020.pdb # 16: usage_00021.pdb # 17: usage_00025.pdb # 18: usage_00026.pdb # 19: usage_00029.pdb # 20: usage_00030.pdb # 21: usage_00036.pdb # 22: usage_00037.pdb # 23: usage_00038.pdb # 24: usage_00039.pdb # 25: usage_00060.pdb # 26: usage_00063.pdb # 27: usage_00064.pdb # 28: usage_00068.pdb # 29: usage_00069.pdb # 30: usage_00070.pdb # 31: usage_00071.pdb # 32: usage_00131.pdb # 33: usage_00141.pdb # 34: usage_00142.pdb # 35: usage_00163.pdb # 36: usage_00164.pdb # 37: usage_00165.pdb # 38: usage_00166.pdb # 39: usage_00167.pdb # 40: usage_00168.pdb # 41: usage_00192.pdb # 42: usage_00193.pdb # 43: usage_00194.pdb # 44: usage_00195.pdb # 45: usage_00216.pdb # 46: usage_00217.pdb # 47: usage_00218.pdb # 48: usage_00219.pdb # 49: usage_00225.pdb # 50: usage_00226.pdb # 51: usage_00452.pdb # 52: usage_00453.pdb # 53: usage_00455.pdb # 54: usage_00456.pdb # 55: usage_00457.pdb # 56: usage_00458.pdb # 57: usage_00478.pdb # 58: usage_00479.pdb # 59: usage_00495.pdb # 60: usage_00496.pdb # 61: usage_00576.pdb # 62: usage_00577.pdb # 63: usage_00578.pdb # 64: usage_00579.pdb # 65: usage_00580.pdb # 66: usage_00581.pdb # 67: usage_00582.pdb # 68: usage_00583.pdb # 69: usage_00593.pdb # 70: usage_00594.pdb # 71: usage_00605.pdb # 72: usage_00606.pdb # 73: usage_00742.pdb # 74: usage_00743.pdb # 75: usage_00756.pdb # 76: usage_00757.pdb # 77: usage_00766.pdb # 78: usage_00767.pdb # 79: usage_00909.pdb # 80: usage_00910.pdb # 81: usage_00987.pdb # 82: usage_01040.pdb # 83: usage_01041.pdb # 84: usage_01044.pdb # 85: usage_01045.pdb # 86: usage_01046.pdb # 87: usage_01110.pdb # # Length: 71 # Identity: 64/ 71 ( 90.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 71 ( 90.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 71 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00002.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00003.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00004.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00005.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00006.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00007.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00008.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00009.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00010.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00011.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00012.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00013.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00014.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00020.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00021.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00025.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00026.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00029.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00030.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00036.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00037.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00038.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00039.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00060.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00063.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00064.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00068.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00069.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00070.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00071.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00131.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00141.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00142.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00163.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00164.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00165.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00166.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00167.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00168.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00192.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00193.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00194.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00195.pdb 1 ------PHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 54 usage_00216.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00217.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00218.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00219.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00225.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00226.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00452.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00453.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00455.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00456.pdb 1 -----LPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 55 usage_00457.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00458.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00478.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00479.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00495.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00496.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00576.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00577.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00578.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00579.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00580.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00581.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00582.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00583.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00593.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00594.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00605.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00606.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00742.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00743.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00756.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00757.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00766.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_00767.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 59 usage_00909.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAH 60 usage_00910.pdb 1 -LEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAH 59 usage_00987.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01040.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01041.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01044.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01045.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01046.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 usage_01110.pdb 1 PLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAW 60 PHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMA usage_00001.pdb 61 RNAPRCIGRIQ 71 usage_00002.pdb 61 RNAPRCIGRIQ 71 usage_00003.pdb 61 RNAPRCIGRIQ 71 usage_00004.pdb 61 RNAPRCIGRIQ 71 usage_00005.pdb 61 RNAPRCIGRIQ 71 usage_00006.pdb 61 RNAPRCIGRIQ 71 usage_00007.pdb 61 RNAPRCIGRIQ 71 usage_00008.pdb 61 RNAPRCIGRIQ 71 usage_00009.pdb 61 RNAPRCIGRIQ 71 usage_00010.pdb 60 RNAPRCIGRIQ 70 usage_00011.pdb 61 RNAPRCIGRIQ 71 usage_00012.pdb 61 RNAPRCIGRIQ 71 usage_00013.pdb 61 RNAPRCIGRIQ 71 usage_00014.pdb 60 RNAPRCIGRIQ 70 usage_00020.pdb 61 RNAPRCIGRIQ 71 usage_00021.pdb 61 RNAPRCIGRIQ 71 usage_00025.pdb 61 RNAPRCIGRIQ 71 usage_00026.pdb 61 RNAPRCIGRIQ 71 usage_00029.pdb 61 RNAPRCIGRIQ 71 usage_00030.pdb 60 RNAPRCIGRIQ 70 usage_00036.pdb 61 RNAPRCIGRIQ 71 usage_00037.pdb 60 RNAPRCIGRIQ 70 usage_00038.pdb 61 RNAPRCIGRIQ 71 usage_00039.pdb 61 RNAPRCIGRIQ 71 usage_00060.pdb 61 RNAPRCIGRIQ 71 usage_00063.pdb 61 RNAPRCIGRIQ 71 usage_00064.pdb 60 RNAPRCIGRIQ 70 usage_00068.pdb 61 RNAPRCIGRIQ 71 usage_00069.pdb 61 RNAPRCIGRIQ 71 usage_00070.pdb 61 RNAPRCIGRIQ 71 usage_00071.pdb 61 RNAPRCIGRIQ 71 usage_00131.pdb 61 RNAPRCIGRIQ 71 usage_00141.pdb 61 RNAPRCIGRIQ 71 usage_00142.pdb 60 RNAPRCIGRIQ 70 usage_00163.pdb 61 RNAPRCIGRIQ 71 usage_00164.pdb 61 RNAPRCIGRIQ 71 usage_00165.pdb 61 RNAPRCIGRIQ 71 usage_00166.pdb 60 RNAPRCIGRIQ 70 usage_00167.pdb 61 RNAPRCIGRIQ 71 usage_00168.pdb 60 RNAPRCIGRIQ 70 usage_00192.pdb 61 RNAPRCIGRIQ 71 usage_00193.pdb 61 RNAPRCIGRIQ 71 usage_00194.pdb 61 RNAPRCIGRIQ 71 usage_00195.pdb 55 RNAPRCIGRIQ 65 usage_00216.pdb 61 RNAPRCIGRIQ 71 usage_00217.pdb 61 RNAPRCIGRIQ 71 usage_00218.pdb 61 RNAPRCIGRIQ 71 usage_00219.pdb 61 RNAPRCIGRIQ 71 usage_00225.pdb 61 RNAPRCIGRIQ 71 usage_00226.pdb 61 RNAPRCIGRIQ 71 usage_00452.pdb 61 RNAPRCIGRIQ 71 usage_00453.pdb 61 RNAPRCIGRIQ 71 usage_00455.pdb 61 RNAPRCIGRIQ 71 usage_00456.pdb 56 RNAPRCIGRIQ 66 usage_00457.pdb 61 RNAPRCIGRIQ 71 usage_00458.pdb 61 RNAPRCIGRIQ 71 usage_00478.pdb 60 RNAPRCIGRIQ 70 usage_00479.pdb 61 RNAPRCIGRIQ 71 usage_00495.pdb 61 RNAPRCIGRIQ 71 usage_00496.pdb 61 RNAPRCIGRIQ 71 usage_00576.pdb 61 RNAPRCIGRIQ 71 usage_00577.pdb 61 RNAPRCIGRIQ 71 usage_00578.pdb 61 RNAPRCIGRIQ 71 usage_00579.pdb 60 RNAPRCIGRIQ 70 usage_00580.pdb 61 RNAPRCIGRIQ 71 usage_00581.pdb 60 RNAPRCIGRIQ 70 usage_00582.pdb 61 RNAPRCIGRIQ 71 usage_00583.pdb 60 RNAPRCIGRIQ 70 usage_00593.pdb 61 RNAPRCIGRIQ 71 usage_00594.pdb 61 RNAPRCIGRIQ 71 usage_00605.pdb 61 RNAPRCIGRIQ 71 usage_00606.pdb 61 RNAPRCIGRIQ 71 usage_00742.pdb 61 RNAPRCIGRIQ 71 usage_00743.pdb 60 RNAPRCIGRIQ 70 usage_00756.pdb 61 RNAPRCIGRIQ 71 usage_00757.pdb 61 RNAPRCIGRIQ 71 usage_00766.pdb 61 RNAPRCIGRIQ 71 usage_00767.pdb 60 RNAPRCIGRIQ 70 usage_00909.pdb 61 RNAPRCIGRIQ 71 usage_00910.pdb 60 RNAPRCIGRIQ 70 usage_00987.pdb 61 RNAPRCIGRIQ 71 usage_01040.pdb 61 RNAPRCIGRIQ 71 usage_01041.pdb 61 RNAPRCIGRIQ 71 usage_01044.pdb 61 RNAPRCIGRIQ 71 usage_01045.pdb 61 RNAPRCIGRIQ 71 usage_01046.pdb 61 RNAPRCIGRIQ 71 usage_01110.pdb 61 RNAPRCIGRIQ 71 RNAPRCIGRIQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################