################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:54 2021 # Report_file: c_0101_6.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00021.pdb # 8: usage_00022.pdb # 9: usage_00170.pdb # 10: usage_00194.pdb # 11: usage_00197.pdb # 12: usage_00198.pdb # 13: usage_00294.pdb # 14: usage_00348.pdb # # Length: 251 # Identity: 91/251 ( 36.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/251 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/251 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-- 58 usage_00016.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-- 58 usage_00017.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-- 58 usage_00018.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 57 usage_00019.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 57 usage_00020.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 57 usage_00021.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 57 usage_00022.pdb 1 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 57 usage_00170.pdb 1 -DQEKIEFLKEAHLMSKFNHPNILKQLGVCLLNEPQYIILELMEGGDLLTYLRKARM--- 56 usage_00194.pdb 1 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 60 usage_00197.pdb 1 --------------MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-- 44 usage_00198.pdb 1 --------------MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP--- 43 usage_00294.pdb 1 TDQEKIEFLKEAHLMSKFNHPNILKQLGVCLLNEPQYIILELMEGGDLLTYLRKARM--- 57 usage_00348.pdb 1 -MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM- 58 M Fn LGV P i ELM GDL YLR R usage_00015.pdb 59 -------M--L-APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 103 usage_00016.pdb 59 ----------L-APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 102 usage_00017.pdb 59 -------MPVL-APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 105 usage_00018.pdb 58 ----------L-APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 101 usage_00019.pdb 58 --------------PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 98 usage_00020.pdb 58 ------------APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 100 usage_00021.pdb 58 -------------PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 99 usage_00022.pdb 58 -------------PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 99 usage_00170.pdb 57 ----ATF---YGPLLTLVDLVDLCVDISKGCVYLERMHFIHRDLAARNCLVSVKDYTSPR 109 usage_00194.pdb 61 NNP-------GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH-----DF 108 usage_00197.pdb 45 ------------APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 87 usage_00198.pdb 44 --------------PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 84 usage_00294.pdb 58 ----ATF---YGPLLTLVDLVDLCVDISKGCVYLERMHFIHRDLAARNCLVSVKDYTSPR 110 usage_00348.pdb 59 ---E--P---VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-----DF 105 L I G YL F HRDLAARNC V usage_00015.pdb 104 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 162 usage_00016.pdb 103 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 161 usage_00017.pdb 106 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 164 usage_00018.pdb 102 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 160 usage_00019.pdb 99 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 157 usage_00020.pdb 101 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 159 usage_00021.pdb 100 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 158 usage_00022.pdb 100 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 158 usage_00170.pdb 110 IVKIGDFGLARDIY----------LPVRWMAPESLMDGIFTTQSDVWSFGILIWEILTLG 159 usage_00194.pdb 109 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 167 usage_00197.pdb 88 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 146 usage_00198.pdb 85 TVKIGDFGMTRDIE-TDRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 143 usage_00294.pdb 111 IVKIGDFGLARDIY-K---EGL--LPVRWMAPESLMDGIFTTQSDVWSFGILIWEILTLG 164 usage_00348.pdb 106 TVKIGDFGMTRDIYG-----GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 160 VKIGDFG RDI LPVRWM PESL DG FTT SDvWSFG WEI tL usage_00015.pdb 163 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---- 218 usage_00016.pdb 162 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 218 usage_00017.pdb 165 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 221 usage_00018.pdb 161 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 217 usage_00019.pdb 158 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---- 213 usage_00020.pdb 160 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 216 usage_00021.pdb 159 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---- 214 usage_00022.pdb 159 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---- 214 usage_00170.pdb 160 HQPYPAHSNLDVLNYVQTGGRLEPPRNCPDDLWNLMTQCWAQEPDQRPTFHRIQDQLQLF 219 usage_00194.pdb 168 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL---- 223 usage_00197.pdb 147 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 203 usage_00198.pdb 144 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--- 200 usage_00294.pdb 165 HQPYPAHSNLDVLNYVQTGGRLEPPRNCPDDLWNLMTQCWAQEPDQRPTFHRIQDQLQLF 224 usage_00348.pdb 161 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---- 216 QPY SN VL V GG L P NCPd l LM CW P RP F I usage_00015.pdb ----------- usage_00016.pdb ----------- usage_00017.pdb ----------- usage_00018.pdb ----------- usage_00019.pdb ----------- usage_00020.pdb ----------- usage_00021.pdb ----------- usage_00022.pdb ----------- usage_00170.pdb 220 RNFFLNSIYKS 230 usage_00194.pdb ----------- usage_00197.pdb ----------- usage_00198.pdb ----------- usage_00294.pdb 225 RNFFLNSIYKS 235 usage_00348.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################