################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:44 2021 # Report_file: c_0145_27.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00169.pdb # 4: usage_00170.pdb # 5: usage_00171.pdb # 6: usage_00199.pdb # 7: usage_00343.pdb # 8: usage_00357.pdb # 9: usage_00454.pdb # 10: usage_00465.pdb # 11: usage_00509.pdb # 12: usage_00570.pdb # # Length: 122 # Identity: 58/122 ( 47.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/122 ( 55.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/122 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -DVQLVESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNY 59 usage_00020.pdb 1 -DVQLVESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNY 59 usage_00169.pdb 1 -QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNY 59 usage_00170.pdb 1 -QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNY 59 usage_00171.pdb 1 -QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNY 59 usage_00199.pdb 1 -QVQLQESGGGLVQPGGSLRLSCAASGSISSITTMGWYRQ----GRELVALINSVGDTTY 55 usage_00343.pdb 1 ---QLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNY 57 usage_00357.pdb 1 ---QLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNY 57 usage_00454.pdb 1 ---QLQESGGGLVQAGGSLRLSCKASGIIFSVYKMTWYRQAPGKERELVALITTNNNTMT 57 usage_00465.pdb 1 MQVQLVETGGGLVQAGGSLRLSCAASGNIFSFNVMGWYRQAPGKQRELVAAITSGDTTTY 60 usage_00509.pdb 1 -DVQLVESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNY 59 usage_00570.pdb 1 ---QLVETGGGLVQAGGSLRLSCAASGNIFSFNVMGWYRQAPGKQRELVAAITSGDTTTY 57 QL E GGGLVQ GGSLRLSCaASG If MgWYRQ RElVA I t y usage_00019.pdb 60 ADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDYSAY--APPSGSRGRGTQVT 117 usage_00020.pdb 60 ADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDYSAY--APPSGSRGRGTQVT 117 usage_00169.pdb 60 ANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAI--IYDYDYWGQGTQVT 117 usage_00170.pdb 60 ANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAI--IYDYDYWGQGTQVT 117 usage_00171.pdb 60 ANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAI--IYDYDYWGQGTQVT 117 usage_00199.pdb 56 AGSVKGRFTISRDNAKNTVYLEMSSLKPEDTAVYYCNAFMSTNS--GRTGSFWGQGTQVT 113 usage_00343.pdb 58 ANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAI--IYDYDYWGQGTQVT 115 usage_00357.pdb 58 ADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLP--------NYRSWGQGTQVT 109 usage_00454.pdb 58 VDSVKGRFTISRDNVQNTVYLEMNNLKPEDTAVYYCNANRG-----LAGPAYWGQGTQVT 112 usage_00465.pdb 61 ADSVQGRFTISRDNAKNAVYLQMNSLTPEDTAVYFCNARRNPINGPYYTTAYWGQGTQVT 120 usage_00509.pdb 60 ADSVKGRFTISG---KNTVYLQMNSLKPEDTAVYYCKREDYSAY--APPSGSRGRGTQVT 114 usage_00570.pdb 58 ADSVQGRFTISRDNAKNAVYLQMNSLTPEDTAVYFCNARRNPINGPYYTTAYWGQGTQVT 117 a SV GRFTIS N vYL M sL PEDTAvY C G GTQVT usage_00019.pdb 118 VS 119 usage_00020.pdb 118 VS 119 usage_00169.pdb 118 V- 118 usage_00170.pdb 118 V- 118 usage_00171.pdb 118 V- 118 usage_00199.pdb 114 VS 115 usage_00343.pdb 116 VS 117 usage_00357.pdb 110 VS 111 usage_00454.pdb 113 V- 113 usage_00465.pdb 121 VS 122 usage_00509.pdb 115 VS 116 usage_00570.pdb 118 VS 119 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################