################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:28 2021 # Report_file: c_1021_19.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00004.pdb # 2: usage_00150.pdb # 3: usage_00190.pdb # 4: usage_00239.pdb # 5: usage_00246.pdb # 6: usage_00271.pdb # 7: usage_00336.pdb # 8: usage_00368.pdb # 9: usage_00579.pdb # # Length: 72 # Identity: 2/ 72 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 72 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 72 ( 72.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 --DIVYIG---LRDV-DPGEHYILKTLG--IKYF--------SMTEVDR-L-----GIGK 38 usage_00150.pdb 1 --DVINIG---IGG-SDLGPLMVTEALKPY----SSGGPRVWFVS------N-I---DGT 40 usage_00190.pdb 1 --DVINIG---IGG-SDLGPLMVTEALKPY----SAEGPRVWFVS------N-I---DGT 40 usage_00239.pdb 1 --DVIAIG---KIS-DIYD---------------GEGV-TE-SLR------TKSNMDGMD 31 usage_00246.pdb 1 NVQLITIGLGE--DY-NEAIMKILADKG---------SGVF--YH----IN--------- 33 usage_00271.pdb 1 --DVINIG---IGG-SDLGPLMVTEALKPY----SSGGPRVWYVS------N-I---DGT 40 usage_00336.pdb 1 --DVINIG---IGG-SDLGPLMVTEALKPY----SSGGPRVWFVS------N-I---DGT 40 usage_00368.pdb 1 -RHVVNIG---IGG-SDLGPVMATEALKPF----SQRDLSLHFVS------N-V---DGT 41 usage_00579.pdb 1 --DIVNIG---IGG-SDLGPKMVVRALQPY----HCTDLKVHFVS------N-V---DAD 40 IG usage_00004.pdb 39 VMEETLSY---- 46 usage_00150.pdb 41 HIAKTLACL--- 49 usage_00190.pdb 41 HIAKTLATL--- 49 usage_00239.pdb 32 KLVDTLNM---- 39 usage_00246.pdb 34 DPSQLPTTLVEQ 45 usage_00271.pdb 41 HIAKTLAQL--- 49 usage_00336.pdb 41 HIAKTLACL--- 49 usage_00368.pdb 42 HIAEVLKS---- 49 usage_00579.pdb 41 SLLQALHVV--- 49 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################