################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:55 2021 # Report_file: c_1247_121.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00248.pdb # 2: usage_00276.pdb # 3: usage_00359.pdb # 4: usage_00617.pdb # 5: usage_00687.pdb # 6: usage_00753.pdb # 7: usage_00754.pdb # 8: usage_00770.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 33 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 33 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00248.pdb 1 TDRAMVCGSLA--F-NVDVMKVLESYGLREGA- 29 usage_00276.pdb 1 -DLITDLSS---------TGTTLRMNHLRVID- 22 usage_00359.pdb 1 -QFKQIRL--T--D-TLGRLSHILEMDHFALVV 27 usage_00617.pdb 1 -ETAILTVPST--E-AQEVADILVKAGIKGIL- 28 usage_00687.pdb 1 -AFLALKGER--FD-AHNFVAQVVANGCQVAI- 28 usage_00753.pdb 1 GKKVLLTGIL-AD--SKDILDILEDNNISVVA- 29 usage_00754.pdb 1 GKKVLLTGIL-AD--SKDILDILEDNNISVVA- 29 usage_00770.pdb 1 GNLFSADL-FY--SPDGEMFDVMEKYGILGVEM 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################