################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:59 2021 # Report_file: c_1387_14.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00004.pdb # 2: usage_01063.pdb # 3: usage_01123.pdb # 4: usage_01661.pdb # # Length: 98 # Identity: 86/ 98 ( 87.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/ 98 ( 87.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 98 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ----------VAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQY 50 usage_01063.pdb 1 SLSQAFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQY 60 usage_01123.pdb 1 SLSQAFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQY 60 usage_01661.pdb 1 ----------VAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQY 50 VAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQY usage_00004.pdb 51 AWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKF- 87 usage_01063.pdb 61 AWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKK-- 96 usage_01123.pdb 61 AWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKF- 97 usage_01661.pdb 51 AWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFP 88 AWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################