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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:14:43 2021
# Report_file: c_0293_11.html
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#====================================
# Aligned_structures: 5
#   1: usage_00002.pdb
#   2: usage_00092.pdb
#   3: usage_00093.pdb
#   4: usage_00225.pdb
#   5: usage_00444.pdb
#
# Length:        141
# Identity:       38/141 ( 27.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    122/141 ( 86.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/141 ( 13.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00002.pdb         1  -----MCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDNIVKYKGVC   53
usage_00092.pdb         1  -GSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDNIVKYKGVC   57
usage_00093.pdb         1  -GSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDNIVKYKGVC   57
usage_00225.pdb         1  FKTVYKGLDTE-T---TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW   56
usage_00444.pdb         1  -GSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDNIVKYKGVC   57
                                mcrydp q   gevVAvkkLQ  hsTeehlrdFerEiEiLKsLQHdNIVkykgvc

usage_00002.pdb        54  YSAG---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--RY  108
usage_00092.pdb        58  YSAG---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--RY  112
usage_00093.pdb        58  YSA----RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--RY  111
usage_00225.pdb        57  EST-VKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPI  114
usage_00444.pdb        58  YSAG---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--RY  112
                           ySa    rrnlkLimEylpyGsLrdYLqkhK ridhikLlqytsQIcKGmeyLgTk  ry

usage_00002.pdb       109  IHRDLATRNILVENENRVKI-  128
usage_00092.pdb       113  IHRDLATRNILVENENRVKI-  132
usage_00093.pdb       112  IHRDLATRNILVENENRVKI-  131
usage_00225.pdb       115  IHRDLKCDNIFITGPTGSVKI  135
usage_00444.pdb       113  IHRDLATRNILVENENRVKI-  132
                           IHRDLatrNIlvenenrvki 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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