################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:39 2021 # Report_file: c_1338_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00093.pdb # 2: usage_00094.pdb # 3: usage_00103.pdb # 4: usage_00114.pdb # 5: usage_00115.pdb # 6: usage_00116.pdb # 7: usage_00117.pdb # 8: usage_00118.pdb # 9: usage_00119.pdb # # Length: 63 # Identity: 1/ 63 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 63 ( 30.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 63 ( 68.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 ----------------------AMADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 35 usage_00094.pdb 1 DKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 57 usage_00103.pdb 1 -------------------------------ILDAARVLEA--T-KFYLNKQAAYVG--- 23 usage_00114.pdb 1 -----LSSKVQQLERSIGLKDLAMADLEQKVLEMEAST---YDGVFIWKISDFPRKRQEA 52 usage_00115.pdb 1 ------------------------ADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 33 usage_00116.pdb 1 ----------------------AMADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 35 usage_00117.pdb 1 ------------------------ADLEQKVLEMEAST---YDGVFIWKISDFPRKRQEA 33 usage_00118.pdb 1 ----------------------AMADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 35 usage_00119.pdb 1 ----------------------AMADLEQKVLEMEAST---YDGVFIWKISDFARKRQEA 35 lemeAst g fiwkisdf rkr usage_00093.pdb 36 VAG 38 usage_00094.pdb 58 VAG 60 usage_00103.pdb --- usage_00114.pdb 53 VAG 55 usage_00115.pdb 34 VAG 36 usage_00116.pdb 36 VAG 38 usage_00117.pdb 34 VAG 36 usage_00118.pdb 36 VAG 38 usage_00119.pdb 36 VAG 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################