################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:30:12 2021 # Report_file: c_0048_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00014.pdb # 7: usage_00015.pdb # 8: usage_00026.pdb # 9: usage_00027.pdb # 10: usage_00028.pdb # 11: usage_00029.pdb # 12: usage_00030.pdb # 13: usage_00072.pdb # 14: usage_00073.pdb # 15: usage_00074.pdb # 16: usage_00161.pdb # # Length: 266 # Identity: 207/266 ( 77.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 207/266 ( 77.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/266 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00007.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00008.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00009.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00010.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00014.pdb 1 PVALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADL 60 usage_00015.pdb 1 PVALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADL 60 usage_00026.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00027.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00028.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00029.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00030.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00072.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00073.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00074.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00161.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 PVALVTGAAKRLG SIAE LHAEGY VCLHYHRSAA A L ATLNARRPNSAITVQADL usage_00006.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLG---DREA 111 usage_00007.pdb 61 SNVATAP-----SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL-----REA 110 usage_00008.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR---DREA 111 usage_00009.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--GDREA 112 usage_00010.pdb 61 SNVATAP-----VAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--GDREA 113 usage_00014.pdb 61 SNVATAS-----SVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLR---DKES 112 usage_00015.pdb 61 SNVATAS-----SVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLR---KKES 112 usage_00026.pdb 61 SNVATAPVGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--GDREA 118 usage_00027.pdb 61 SNVATAP-----SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN--DREA 113 usage_00028.pdb 61 SNVATAP-----VAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----REA 111 usage_00029.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--GDREA 112 usage_00030.pdb 61 SNVATAP-----SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDGDREA 115 usage_00072.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN-GDREA 113 usage_00073.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--NDREA 112 usage_00074.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----REA 110 usage_00161.pdb 61 SNVATAP------APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDGDREA 114 SNVATA PVTLF RC LV ACY HWGRCDVLVNNASSFYPTPLL E usage_00006.pdb 112 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 171 usage_00007.pdb 111 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 170 usage_00008.pdb 112 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 171 usage_00009.pdb 113 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 172 usage_00010.pdb 114 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 173 usage_00014.pdb 113 LEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYT 172 usage_00015.pdb 113 LEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYT 172 usage_00026.pdb 119 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 178 usage_00027.pdb 114 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 173 usage_00028.pdb 112 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 171 usage_00029.pdb 113 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 172 usage_00030.pdb 116 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 175 usage_00072.pdb 114 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 173 usage_00073.pdb 113 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 172 usage_00074.pdb 111 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 170 usage_00161.pdb 115 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 174 E A ADLFGSNAIAPYFLIKAFA RVA T A RGT YSI NMVDAMT QPLLGYT YT usage_00006.pdb 172 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 230 usage_00007.pdb 171 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 229 usage_00008.pdb 172 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 230 usage_00009.pdb 173 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 231 usage_00010.pdb 174 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 232 usage_00014.pdb 173 MAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDM-PFSVQEDYRRKVPLYQRNSSA 231 usage_00015.pdb 173 MAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDM-PFSVQEDYRRKVPLYQRNSSA 231 usage_00026.pdb 179 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 237 usage_00027.pdb 174 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---------EGHRSKVPLYQRDSSA 224 usage_00028.pdb 172 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----VWEGHRSKVPLYQRDSSA 227 usage_00029.pdb 173 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 231 usage_00030.pdb 176 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 234 usage_00072.pdb 174 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 232 usage_00073.pdb 173 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PEGHRSKVPLYQRDSSA 228 usage_00074.pdb 171 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVA---V---WEGHRSKVPLYQRDSSA 224 usage_00161.pdb 175 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-PPAVWEGHRSKVPLYQRDSSA 233 MAK ALEGLTRSAALELA LQIRVNGV PGLSVL E R KVPLYQR SSA usage_00006.pdb 231 AEVSDVVIFLCSSKAKYITGTCVKVD 256 usage_00007.pdb 230 AEVSDVVIFLCSSKAKYITGTCVKVD 255 usage_00008.pdb 231 AEVSDVVIFLCSSKAKYITGTCVKVD 256 usage_00009.pdb 232 AEVSDVVIFLCSSKAKYITGTCVKVD 257 usage_00010.pdb 233 AEVSDVVIFLCSSKAKYITGTCVKVD 258 usage_00014.pdb 232 EEVSDVVIFLCSPKAKYITGTCIKVD 257 usage_00015.pdb 232 EEVSDVVIFLCSPKAKYITGTCIKVD 257 usage_00026.pdb 238 AEVSDVVIFLCSSKAKYITGTCVKVD 263 usage_00027.pdb 225 AEVSDVVIFLCSSKAKYITGTCVKVD 250 usage_00028.pdb 228 AEVSDVVIFLCSSKAKYITGTCVKVD 253 usage_00029.pdb 232 AEVSDVVIFLCSSKAKYITGTCVKVD 257 usage_00030.pdb 235 AEVSDVVIFLCSSKAKYITGTCVKVD 260 usage_00072.pdb 233 AEVSDVVIFLCSSKAKYITGTCVKVD 258 usage_00073.pdb 229 AEVSDVVIFLCSSKAKYITGTCVKVD 254 usage_00074.pdb 225 AEVSDVVIFLCSSKAKYITGTCVKVD 250 usage_00161.pdb 234 AEVSDVVIFLCSSKAKYITGTCVKVD 259 EVSDVVIFLCS KAKYITGTC KVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################