################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:42 2021 # Report_file: c_0199_40.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00014.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00063.pdb # 5: usage_00081.pdb # 6: usage_00082.pdb # 7: usage_00274.pdb # 8: usage_00371.pdb # 9: usage_00415.pdb # # Length: 150 # Identity: 25/150 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/150 ( 22.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/150 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 SAEQGAARFALEESG-YIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTL 59 usage_00059.pdb 1 -VEYGAACFAGEQAG-HFYSRISNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTL 58 usage_00060.pdb 1 -VEYGAACFAGEQAG-HFYSRISNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTL 58 usage_00063.pdb 1 -PEHAANLFALKEFGN-IYSRIMNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTL 58 usage_00081.pdb 1 -CQQGGNRFAGQESG-YIYTRLGNPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTI 58 usage_00082.pdb 1 -CQQGGNRFAGQESG-YIYTRLGNPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTI 58 usage_00274.pdb 1 SAEQGAARFALEESG-YIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTL 59 usage_00371.pdb 1 TLEEGQERFATG-EG-YVYARQKDPTAKALEERLKALEGALEAVVLASGQAATFAALLAL 58 usage_00415.pdb 1 SAEQGAARFALEESG-YIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTL 59 g FA G Y R nPT LE a LE a a SG A t usage_00014.pdb 60 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVD--AAKPEEIRAAMRPETKVVYIET 117 usage_00059.pdb 59 LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD--MADLQALEAAMTPATRVIYFES 116 usage_00060.pdb 59 LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD--MADLQALEAAMTPATRVIYFES 116 usage_00063.pdb 59 AQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-RPEEFLALTDEKTRAWWVES 117 usage_00081.pdb 59 LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFIN--TAIPGEVKKHMKPNTKIVYFET 116 usage_00082.pdb 59 LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFIN--TAIPGEVKKHMKPNTKIVYFET 116 usage_00274.pdb 60 CQQGDHIVSASAIYGATHAFLSHSMPKFGINVSFVD--AAKPEEIRAAMRPETKVVYIET 117 usage_00371.pdb 59 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVD--P-EPEAVREALSAKTRAVFVET 115 usage_00415.pdb 60 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVSFVD--AAKPEEIRAAMRPETKVVYIET 117 GD yG T G T E usage_00014.pdb 118 PANPTLSLVDIETVAGIAHQQGALLVVD-- 145 usage_00059.pdb 117 PANPNMHMADIAGVAKIARKHGATVVVD-- 144 usage_00060.pdb 117 PANPNMHMADIAGVAKIARKHGATVVVD-- 144 usage_00063.pdb 118 IGNPALNIPDLEALAQAAREKGVALIVD-- 145 usage_00081.pdb 117 PANPTLKIIDMERVCKDAHSQEGVLVIA-- 144 usage_00082.pdb 117 PANPTLKIIDMERVCKDAHSQEGVLVIA-- 144 usage_00274.pdb 118 PANPTLSLVDIETVAGIAHQQGALLVVDNT 147 usage_00371.pdb 116 VANPALLVPDLEALATLAEEAGVALVV--- 142 usage_00415.pdb 118 PANPTLSLVDIETVAGIAHQQGALLVVD-- 145 aNP D A v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################