################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:15 2021 # Report_file: c_1082_37.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00103.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00116.pdb # 5: usage_00117.pdb # 6: usage_00331.pdb # 7: usage_00396.pdb # 8: usage_00397.pdb # 9: usage_00398.pdb # 10: usage_00426.pdb # 11: usage_00427.pdb # 12: usage_00560.pdb # 13: usage_00821.pdb # # Length: 61 # Identity: 53/ 61 ( 86.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 61 ( 86.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 61 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV--- 56 usage_00114.pdb 1 ----MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ 56 usage_00115.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 58 usage_00116.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-- 57 usage_00117.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-- 57 usage_00331.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV--- 56 usage_00396.pdb 1 ----MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV--- 53 usage_00397.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 58 usage_00398.pdb 1 ----MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 55 usage_00426.pdb 1 NWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 59 usage_00427.pdb 1 NWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 59 usage_00560.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV--- 56 usage_00821.pdb 1 -WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI- 58 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV usage_00103.pdb - usage_00114.pdb 57 A 57 usage_00115.pdb - usage_00116.pdb - usage_00117.pdb - usage_00331.pdb - usage_00396.pdb - usage_00397.pdb - usage_00398.pdb - usage_00426.pdb - usage_00427.pdb - usage_00560.pdb - usage_00821.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################