################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:56:59 2021 # Report_file: c_0669_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00722.pdb # 2: usage_00723.pdb # 3: usage_00948.pdb # 4: usage_00949.pdb # 5: usage_01032.pdb # 6: usage_01033.pdb # 7: usage_01034.pdb # # Length: 73 # Identity: 3/ 73 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 73 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 73 ( 38.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00722.pdb 1 --SVAAIRSSAFNSKGG-----TTVFNFLSA-----GENILLHISIRPGE-NVIVFNSRL 47 usage_00723.pdb 1 --SVAAIRSSAFNSKGG-----TTVFNFLSA-----GENILLHISIRPGE-NVIVFNSRL 47 usage_00948.pdb 1 -GDIVTFFSSALNLSAGAGSPNNTALNLLSE-----NGAYLLHIAFRLQE-NVIVFNSRQ 53 usage_00949.pdb 1 --DIVTFFSSALNLSAGAGSPNNTALNLLSE-----NGAYLLHIAFRLQE-NVIVFNSRQ 52 usage_01032.pdb 1 --DIVTFFSSALNLNAGAGNPNNTTLNLFAE-----NGAYLLHIAFRLQE-NVIIFNSRQ 52 usage_01033.pdb 1 --DIVTFFSSALNLNAGAGNPNNTTLNLFAE-----NGAYLLQIAFRLQE-NVIIFNSRQ 52 usage_01034.pdb 1 GVNIYNIS--A-------------GTSVDLAAPVTTG---DIVTFFSSALPNNTTLNLFA 42 A n ll i r e Nvi fNsr usage_00722.pdb 48 KNGAWGPEERIP- 59 usage_00723.pdb 48 KNGAWGPEERIP- 59 usage_00948.pdb 54 PNAPWLVEQRVS- 65 usage_00949.pdb 53 PNAPWLVEQRVS- 64 usage_01032.pdb 53 PDGPWLVEQRVS- 64 usage_01033.pdb 53 PDGPWLVEQRVSD 65 usage_01034.pdb 43 ENGAYLLHIAF-- 53 w e r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################