################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:49:44 2021 # Report_file: c_1460_102.html ################################################################################################ #==================================== # Aligned_structures: 62 # 1: usage_00007.pdb # 2: usage_00228.pdb # 3: usage_00229.pdb # 4: usage_00230.pdb # 5: usage_00804.pdb # 6: usage_00997.pdb # 7: usage_00998.pdb # 8: usage_00999.pdb # 9: usage_01000.pdb # 10: usage_01001.pdb # 11: usage_01002.pdb # 12: usage_01022.pdb # 13: usage_01023.pdb # 14: usage_01024.pdb # 15: usage_01025.pdb # 16: usage_01026.pdb # 17: usage_01027.pdb # 18: usage_01028.pdb # 19: usage_01029.pdb # 20: usage_01030.pdb # 21: usage_01031.pdb # 22: usage_01032.pdb # 23: usage_01037.pdb # 24: usage_01351.pdb # 25: usage_01352.pdb # 26: usage_01407.pdb # 27: usage_01408.pdb # 28: usage_01409.pdb # 29: usage_01410.pdb # 30: usage_01411.pdb # 31: usage_01519.pdb # 32: usage_01520.pdb # 33: usage_01521.pdb # 34: usage_01522.pdb # 35: usage_01523.pdb # 36: usage_01524.pdb # 37: usage_01525.pdb # 38: usage_01526.pdb # 39: usage_01527.pdb # 40: usage_01528.pdb # 41: usage_01529.pdb # 42: usage_01530.pdb # 43: usage_01531.pdb # 44: usage_01532.pdb # 45: usage_01533.pdb # 46: usage_01721.pdb # 47: usage_01831.pdb # 48: usage_01832.pdb # 49: usage_01833.pdb # 50: usage_01834.pdb # 51: usage_01835.pdb # 52: usage_01836.pdb # 53: usage_01839.pdb # 54: usage_01971.pdb # 55: usage_02087.pdb # 56: usage_02088.pdb # 57: usage_02118.pdb # 58: usage_02155.pdb # 59: usage_02259.pdb # 60: usage_02260.pdb # 61: usage_02262.pdb # 62: usage_02263.pdb # # Length: 34 # Identity: 9/ 34 ( 26.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 34 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 34 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GIRVNGVAPGVSL---LPAM-GEEEKDKWRRKV- 29 usage_00228.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00229.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00230.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00804.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00997.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00998.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_00999.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01000.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01001.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01002.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01022.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01023.pdb 1 GIRVNGVAPGVSL---L-PAMGEEEKDKWRRKVP 30 usage_01024.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01025.pdb 1 GIRVNGVAPGVSL---LPAM-GEEEKDKWRRKV- 29 usage_01026.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKVP 31 usage_01027.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01028.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01029.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01030.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01031.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01032.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01037.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01351.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01352.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01407.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01408.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01409.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01410.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01411.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRR--- 28 usage_01519.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01520.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01521.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01522.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01523.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01524.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01525.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01526.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRR--- 28 usage_01527.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRR--- 28 usage_01528.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKVP 31 usage_01529.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01530.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01531.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKVP 31 usage_01532.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01533.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01721.pdb 1 GIRVNTIAPGTMKTPI-MESVGEEALAKFAA--- 30 usage_01831.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01832.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01833.pdb 1 GIRVNGVAPGVSL---LP--------DKWRRKV- 22 usage_01834.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01835.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01836.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01839.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_01971.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02087.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02088.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02118.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02155.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02259.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02260.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02262.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 usage_02263.pdb 1 GIRVNGVAPGVSL---LPVAMGEEEKDKWRRKV- 30 GIRVNgvAPGvsl dKwrr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################