################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:03 2021 # Report_file: c_1426_29.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00269.pdb # 2: usage_00284.pdb # 3: usage_00285.pdb # 4: usage_00286.pdb # 5: usage_00287.pdb # 6: usage_00358.pdb # 7: usage_00456.pdb # 8: usage_00458.pdb # 9: usage_00459.pdb # 10: usage_00639.pdb # 11: usage_00798.pdb # 12: usage_00799.pdb # # Length: 78 # Identity: 5/ 78 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 78 ( 14.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 78 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00269.pdb 1 ------------RQHKYLSWLA----GSRPWLAGDRISYGDLAAAAAISVLDYLG-EIDW 43 usage_00284.pdb 1 -KEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 56 usage_00285.pdb 1 -KEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 56 usage_00286.pdb 1 -KEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 56 usage_00287.pdb 1 -KEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 56 usage_00358.pdb 1 PEEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 57 usage_00456.pdb 1 --------------PAGLQVLND-YLADKSYIEGYVPSQADVAVFEAVS------SPP-P 38 usage_00458.pdb 1 PEEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 57 usage_00459.pdb 1 PEEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 57 usage_00639.pdb 1 -----QEKADKF--DEALGWLNT-FLDGRPFVAGENMTVADITIVVTITNIDAFG-YD-F 50 usage_00798.pdb 1 PEEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 57 usage_00799.pdb 1 PEEKVERNRTAM--DQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALG-YELF 57 L wL rp aG aD usage_00269.pdb 44 SDAPTAKEWYQRLKSR-- 59 usage_00284.pdb 57 EGRPRLAAWRGRVEAFL- 73 usage_00285.pdb 57 EGRPRLAAWRGRVEAFL- 73 usage_00286.pdb 57 EGRPRLAAWRGRVEAFLG 74 usage_00287.pdb 57 EGRPRLAAWRGRVEAFL- 73 usage_00358.pdb 58 EGRPRLAAWRGRVEAFL- 74 usage_00456.pdb 39 ADLCHALRWYNHIKSYE- 55 usage_00458.pdb 58 EGRPRLAAWRGRVEAFL- 74 usage_00459.pdb 58 EGRPRLAAWRGRVEAFL- 74 usage_00639.pdb 51 SSHENIAKWFERTKKML- 67 usage_00798.pdb 58 EGRPRLAAWRGRVEAFL- 74 usage_00799.pdb 58 EGRPRLAAWRGRVEAFL- 74 W r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################