################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:09:44 2021 # Report_file: c_0311_5.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00002.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00038.pdb # 9: usage_00039.pdb # 10: usage_00040.pdb # 11: usage_00041.pdb # 12: usage_00042.pdb # 13: usage_00043.pdb # 14: usage_00047.pdb # 15: usage_00049.pdb # 16: usage_00060.pdb # 17: usage_00071.pdb # 18: usage_00075.pdb # 19: usage_00080.pdb # 20: usage_00081.pdb # 21: usage_00082.pdb # 22: usage_00083.pdb # 23: usage_00085.pdb # 24: usage_00091.pdb # 25: usage_00101.pdb # # Length: 153 # Identity: 47/153 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/153 ( 32.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/153 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ------RITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPE 54 usage_00013.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00014.pdb 1 ------RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 54 usage_00018.pdb 1 ---LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 57 usage_00019.pdb 1 ----PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPE 56 usage_00023.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00024.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00038.pdb 1 -------IIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 53 usage_00039.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00040.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00041.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00042.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00043.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00047.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00049.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00060.pdb 1 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPE 60 usage_00071.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00075.pdb 1 GMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPE 60 usage_00080.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00081.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00082.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00083.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00085.pdb 1 -----KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPD 55 usage_00091.pdb 1 -----KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPD 55 usage_00101.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 E L P PGI I G P E G LE P usage_00002.pdb 55 QYPMEPPKVRFLTKIYHPNIDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSSPE 110 usage_00013.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 112 usage_00014.pdb 55 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 110 usage_00018.pdb 58 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 113 usage_00019.pdb 57 QYPMEPPKVRFLTKIYHPNIDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSSPE 112 usage_00023.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00024.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00038.pdb 54 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 109 usage_00039.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00040.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00041.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00042.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00043.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 112 usage_00047.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRIKLDILA----DKWSPALQIRTVLLSIQALLSAPN 112 usage_00049.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00060.pdb 61 RYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPN 120 usage_00071.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRIKLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00075.pdb 61 RYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPN 120 usage_00080.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 112 usage_00081.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00082.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 112 usage_00083.pdb 56 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 111 usage_00085.pdb 56 DYPMEAPKVRFLTKIYHPAIDRLGRISLDVLK----TNWSPALQIRTVLLSIQALLASPN 111 usage_00091.pdb 56 DYPMEAPKVRFLTKIYHPNIDRLGRICLDVLK----TNWSPALQIRTVLLSIQALLASPN 111 usage_00101.pdb 57 EYPMAAPKVRFMTKIYHPNVDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPN 112 YP P RF T IYHPn D GRI LD Lk W P L I TVL SIQ L P usage_00002.pdb 111 PDD-D-SKVAEHFKQDKNDAEHVARQWNKI--- 138 usage_00013.pdb 113 PDD-P-NDVAEQWKTNEAQAIETARAWTRL--- 140 usage_00014.pdb 111 PDD-P-NDVAEQWKTNEAQAIETARAWTRL--- 138 usage_00018.pdb 114 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 143 usage_00019.pdb 113 PDDPLDSKVAEHFKQDKNDAEHVARQWNKI--- 142 usage_00023.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00024.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00038.pdb 110 PDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 142 usage_00039.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 144 usage_00040.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00041.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRLY-- 142 usage_00042.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 144 usage_00043.pdb 113 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 142 usage_00047.pdb 113 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 142 usage_00049.pdb 112 PD--G-NDVAEQWKTNEAQAIETARAWTRL--- 138 usage_00060.pdb 121 PDDPLMADISSEFKYNKPAFLKNARQWTEK--- 150 usage_00071.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00075.pdb 121 PDDPLMADISSEFKYNKPAFLKNARQWTEK--- 150 usage_00080.pdb 113 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 142 usage_00081.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00082.pdb 113 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 142 usage_00083.pdb 112 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 141 usage_00085.pdb 112 PN----NDVAEDWIKNEQGAKAKAREWTKL--- 137 usage_00091.pdb 112 PNDPLANDVAEDWIKNEQGAKAKAREWTKL--- 141 usage_00101.pdb 113 PDDPLANDVAEQWKTNEAQAIETARAWTRL--- 142 P AR W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################