################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:13 2021 # Report_file: c_0406_88.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00063.pdb # 2: usage_00064.pdb # 3: usage_00068.pdb # 4: usage_00092.pdb # 5: usage_00183.pdb # 6: usage_00259.pdb # 7: usage_00313.pdb # 8: usage_00330.pdb # 9: usage_00385.pdb # 10: usage_00421.pdb # # Length: 116 # Identity: 3/116 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/116 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/116 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 ----------TE---TT--ATSVTLTWDSG--NSEPV--TYYGIQYRA-A-GT---E--G 34 usage_00064.pdb 1 ----------VN---IS--ATSLTLIWKVS-DNE-SSSNYTYKIHVAGET---------D 34 usage_00068.pdb 1 -------VQ-ARM--LS--STTILVQWKEPEEPNGQI--QGYRVYYTM-DPTQHVN---N 42 usage_00092.pdb 1 ----------VL---VS--SRFVRLSWRPPAEAKGNI--QTFTVFFSR-E-GD---N--R 36 usage_00183.pdb 1 ----QG----VTVSKNDGNGTAILVSWQPPPE---MV--QEYKVWCLG-N-ET---R--Y 40 usage_00259.pdb 1 ------SLH-VR---PQ--TNCIIMSWTPPLNPNIVV--RGYIIGYGV-G---------S 36 usage_00313.pdb 1 -----Y----TEA--VS--DTQIMLKWTY-------I--QGFYIYYRP-T-DSD--NDSD 34 usage_00330.pdb 1 ----------TD---VT--STSVTLSWEPP-PG--PI--TGYRVEYRE-A-G----G--E 32 usage_00385.pdb 1 ----TS-LVLSQ---VT--SSSIRLSWTPA-PR--HP--LKYLIVWRA-S-RG---G--T 38 usage_00421.pdb 1 LPAPKN-LVVSE---VT--EDSLRLSWTAP-DA--AF--DSFLIQYQE-S-E----G--E 41 W usage_00063.pdb 35 --PFQEVDG-VATTRYSIGGLSPFSEYAFRVLAVNSIGRG-----PPSEAVRAR-- 80 usage_00064.pdb 35 --SSNLNVS---EPRAVIPGLRSSTFYNITVCPVLGDIEG-----TPGFLQ----- 75 usage_00068.pdb 43 --WMKH-NV-ADSQITTIGNLVPQKTYSVKVLAFTSIGDG-----PLSSDIQVI-- 87 usage_00092.pdb 37 --ERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPG-----ESSQPIKVA-- 83 usage_00183.pdb 41 --HINKTVD-GSTFSVVIPFLVPGIRYSVEVAAS---GSG-----VKSEPQFIQLD 85 usage_00259.pdb 37 PYAETVRVD-SKQRYYSIERLESSSHYVISLKAFNNAGEG-----VPLYESAT--- 83 usage_00313.pdb 35 --YKRDVVE-GSKQWHMIGHLQPETSYDIKMQCFNEGGES-----EFSNVMICE-- 80 usage_00330.pdb 33 --WKEVTVP-GSETSYTVTGLKPGTEYEFRVRAVNGAGEG-----PPSSVSVTT-- 78 usage_00385.pdb 39 --PREVVVE-GPAASTELHNLASRTEYLVSVFPIYEGGVG-----EGLRGLVTT-A 85 usage_00421.pdb 42 --AINLTVP-GSERSYDLTGLKPGTEYTVSIYGVLGSYVFEHDVMLPLSAEF---- 90 L Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################