################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:31 2021 # Report_file: c_1035_21.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00045.pdb # 2: usage_00187.pdb # 3: usage_00188.pdb # 4: usage_00189.pdb # 5: usage_00190.pdb # 6: usage_00191.pdb # 7: usage_00222.pdb # 8: usage_00223.pdb # 9: usage_00224.pdb # # Length: 41 # Identity: 14/ 41 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 41 ( 53.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 41 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELD----- 36 usage_00187.pdb 1 KFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTK 41 usage_00188.pdb 1 KFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQL-- 39 usage_00189.pdb 1 KFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQL-- 39 usage_00190.pdb 1 KFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTK 41 usage_00191.pdb 1 KFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQL-- 39 usage_00222.pdb 1 RILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTK 41 usage_00223.pdb 1 RILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMT- 40 usage_00224.pdb 1 RILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTK 41 L AHRGaSg PEhT sy kmkAD ELD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################