################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:23 2021 # Report_file: c_1105_79.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00385.pdb # 2: usage_00955.pdb # 3: usage_00956.pdb # # Length: 76 # Identity: 47/ 76 ( 61.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 76 ( 76.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 76 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00385.pdb 1 -YEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACC------ 53 usage_00955.pdb 1 -------CKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACC------ 47 usage_00956.pdb 1 DYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCAEGADP 60 CKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACC usage_00385.pdb 54 --DTRTSALSAKS--- 64 usage_00955.pdb 48 --YDTRTSALSAKSCE 61 usage_00956.pdb 61 DCYDTRTSALSAKSCE 76 ydtrtsalsak #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################