################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:22:05 2021 # Report_file: c_0272_1.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00005.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00031.pdb # 11: usage_00032.pdb # 12: usage_00033.pdb # 13: usage_00034.pdb # 14: usage_00039.pdb # 15: usage_00040.pdb # 16: usage_00041.pdb # 17: usage_00047.pdb # 18: usage_00057.pdb # 19: usage_00058.pdb # 20: usage_00059.pdb # # Length: 209 # Identity: 41/209 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 134/209 ( 64.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/209 ( 29.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ---------SELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 51 usage_00008.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00009.pdb 1 -NQFLINTNSELALMYNDESVLENHHLAVGFKLLQEDNCDIFQNLSKRQRQSLRKMVIDM 59 usage_00010.pdb 1 -NQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 59 usage_00011.pdb 1 ---------SELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 51 usage_00013.pdb 1 ---------SELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 51 usage_00014.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00015.pdb 1 -------------------SVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 41 usage_00016.pdb 1 -------------------GTLEQLHTATAFELLNVTEFDFTSSMDNASFLEFKNIVSHL 41 usage_00031.pdb 1 SNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEE-HDIFMNLTKKQRQTLRKMVIDM 59 usage_00032.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00033.pdb 1 ---------SELALMYNDESVLENHHLAVGFKLLQEE-HDIFMNLTKKQRQTLRKMVIDM 50 usage_00034.pdb 1 ---------------------LENHHLAVGFKLLQE-EHDIFMNLTKKQRQTLRKMVIDM 38 usage_00039.pdb 1 SNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 60 usage_00040.pdb 1 SNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 60 usage_00041.pdb 1 -NQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 59 usage_00047.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00057.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00058.pdb 1 ---------------------LENHHLAVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDM 39 usage_00059.pdb 1 ---------------------LENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMVIDI 39 LEnhHlAvgFkLLqe Dif nl k qrq lrkmVid usage_00005.pdb 52 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 109 usage_00008.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00009.pdb 60 VLATDMSKHMTLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLRNMVHCADLSNPTKP-- 117 usage_00010.pdb 60 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 117 usage_00011.pdb 52 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 109 usage_00013.pdb 52 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 109 usage_00014.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00015.pdb 42 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 99 usage_00016.pdb 42 IGHTDMSLHSETVAKHGAKLSAGGFD------CTCKEDRLEALSLLLHAADIGASSRGVA 95 usage_00031.pdb 60 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 117 usage_00032.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00033.pdb 51 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 108 usage_00034.pdb 39 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 96 usage_00039.pdb 61 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 118 usage_00040.pdb 61 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 118 usage_00041.pdb 60 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 117 usage_00047.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00057.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00058.pdb 40 VLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKS-- 97 usage_00059.pdb 40 VLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQNMVHCADLSNPTKP-- 97 vlaTDMSkHm llAdlktmvetkkvt ldny DRiqvL nmvHcADlsnptk usage_00005.pdb 110 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 166 usage_00008.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 154 usage_00009.pdb 118 ---LELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 174 usage_00010.pdb 118 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 174 usage_00011.pdb 110 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 166 usage_00013.pdb 110 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 166 usage_00014.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 154 usage_00015.pdb 100 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 156 usage_00016.pdb 96 IAR-----K-WLVILQEFADQAEDERRRGLPVTPGFETP-SSVEKSQIPFLDFFVIPTFD 148 usage_00031.pdb 118 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 174 usage_00032.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPM-DKHTASVEKSQVGFIDYIVHPLWE 153 usage_00033.pdb 109 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 165 usage_00034.pdb 97 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPM-DKHTASVEKSQVGFIDYIVHPLWE 152 usage_00039.pdb 119 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 175 usage_00040.pdb 119 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 175 usage_00041.pdb 118 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 174 usage_00047.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 154 usage_00057.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPM-DKHTASVEKSQVGFIDYIVHPLWE 153 usage_00058.pdb 98 ---LELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 154 usage_00059.pdb 98 ---LQLYRQWTDRIMEEFFPQGDRERERGMEISPMCDKHNASVEKSQVGFIDYIVHPLWE 154 q tdrIm EFf Qgd EReRGmeisPm dkh aSVEKSQvgFiDyiVhPlwe usage_00005.pdb 167 TWADLVQPDAQDILDTLEDNRNWYQSMI- 194 usage_00008.pdb 155 TWADLVQPDAQ------------------ 165 usage_00009.pdb 175 TWADLVHPDAQEILDTLEDNRDWYYSAI- 202 usage_00010.pdb 175 TWADLVQPDAQDILDTLEDNRNWYQSMI- 202 usage_00011.pdb 167 TWADLVQPDAQDILDTLEDNRNWYQSMI- 194 usage_00013.pdb 167 TWADLVQPDAQDILDTLEDNRNWYQSMI- 194 usage_00014.pdb 155 TWADLVQPDAQDILDTLEDNRNWYQSMI- 182 usage_00015.pdb 157 TWADLVQPDAQ------------------ 167 usage_00016.pdb 149 LLHQLFP-SIEEPLHNLRKLRELYAAKAG 176 usage_00031.pdb 175 TWADLVQPDAQDILDTLEDNRNWYQSM-- 201 usage_00032.pdb 154 TWADLVQPDAQ------------------ 164 usage_00033.pdb 166 TWADLVQPDAQDILDTLEDNRNWYQSM-- 192 usage_00034.pdb 153 TWADLVQPDAQDILDTLEDNRNWYQSM-- 179 usage_00039.pdb 176 TWADLVQPDAQDILDTLEDNRNWYQSMI- 203 usage_00040.pdb 176 TWADLVQPDAQDILDTLEDNRNWYQSMI- 203 usage_00041.pdb 175 TWADLVQPDAQDILDTLEDNRNWYQSMI- 202 usage_00047.pdb 155 TWADLVQPDAQDILDTLEDNRNWYQAMI- 182 usage_00057.pdb 154 TWADLVQPDAQDILDTLEDNRNWYQSM-- 180 usage_00058.pdb 155 TWADLVQPDAQDILDTLEDNRNWYQSM-- 181 usage_00059.pdb 155 TWADLVHPDAQ------------------ 165 twadLv daq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################