################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:08 2021 # Report_file: c_0464_22.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00240.pdb # 2: usage_00993.pdb # 3: usage_00994.pdb # 4: usage_01326.pdb # 5: usage_01327.pdb # 6: usage_01328.pdb # 7: usage_01329.pdb # 8: usage_01330.pdb # 9: usage_01331.pdb # 10: usage_01332.pdb # 11: usage_01333.pdb # 12: usage_01334.pdb # 13: usage_01335.pdb # # Length: 92 # Identity: 39/ 92 ( 42.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 92 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 92 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00240.pdb 1 -PIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 55 usage_00993.pdb 1 RPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYR- 59 usage_00994.pdb 1 RPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYR- 59 usage_01326.pdb 1 -PIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 59 usage_01327.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01328.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01329.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01330.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01331.pdb 1 -PIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 59 usage_01332.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01333.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01334.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 usage_01335.pdb 1 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 60 P INAG HPTQ LLD TI E G G I VGDLK GRTVHSL L usage_00240.pdb 56 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 87 usage_00993.pdb 60 VSLRYVAPPSLRMPPTVRAFVASRGTKQEEFE 91 usage_00994.pdb 60 VSLRYVAPPSLRMPPTVRAFVASRGTKQEE-- 89 usage_01326.pdb 60 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 91 usage_01327.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01328.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01329.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01330.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01331.pdb 60 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 91 usage_01332.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01333.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01334.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 usage_01335.pdb 61 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 92 V V P LR P K E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################