################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:31:58 2021 # Report_file: c_1488_105.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00742.pdb # 2: usage_00779.pdb # 3: usage_01357.pdb # 4: usage_01358.pdb # 5: usage_01361.pdb # 6: usage_01365.pdb # 7: usage_01981.pdb # 8: usage_01982.pdb # 9: usage_02842.pdb # 10: usage_02844.pdb # 11: usage_02846.pdb # 12: usage_03398.pdb # 13: usage_03851.pdb # 14: usage_05737.pdb # 15: usage_05741.pdb # 16: usage_05742.pdb # 17: usage_05755.pdb # 18: usage_05756.pdb # 19: usage_05757.pdb # 20: usage_06213.pdb # 21: usage_07036.pdb # 22: usage_07037.pdb # 23: usage_07038.pdb # 24: usage_07039.pdb # 25: usage_07151.pdb # 26: usage_07432.pdb # 27: usage_07481.pdb # 28: usage_08455.pdb # 29: usage_08500.pdb # 30: usage_08504.pdb # 31: usage_08746.pdb # 32: usage_08747.pdb # 33: usage_08748.pdb # 34: usage_08749.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 33 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 33 ( 69.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00742.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEEL---- 26 usage_00779.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_01357.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_01358.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_01361.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_01365.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_01981.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEEL---- 26 usage_01982.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEEL---- 26 usage_02842.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_02844.pdb 1 ---TDEGLEAVNKDKPLGAA-LKSYEEELAK-- 27 usage_02846.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_03398.pdb 1 ----DEGLEAVNKDKPLGAVALKSYEEELA--- 26 usage_03851.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELVKDP 30 usage_05737.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_05741.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_05742.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEELA--- 25 usage_05755.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEEL---- 24 usage_05756.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEEL---- 24 usage_05757.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEEL---- 24 usage_06213.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELAKDP 30 usage_07036.pdb 1 ----KSYEEELAKDP------------------ 11 usage_07037.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_07038.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_07039.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_07151.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEELA--- 25 usage_07432.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_07481.pdb 1 TGEAIGTGMSILLMVV------QSWEEESRRMR 27 usage_08455.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_08500.pdb 1 -----EGLEAVNKDKPLGAVALKSYEEEL---- 24 usage_08504.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEEL---- 26 usage_08746.pdb 1 ----KSYEEELAKDP------------------ 11 usage_08747.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_08748.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 usage_08749.pdb 1 ---TDEGLEAVNKDKPLGAVALKSYEEELA--- 27 e kd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################