################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:50 2021 # Report_file: c_0462_112.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00112.pdb # 2: usage_00489.pdb # 3: usage_00490.pdb # 4: usage_00590.pdb # 5: usage_00593.pdb # 6: usage_00727.pdb # 7: usage_00844.pdb # # Length: 103 # Identity: 3/103 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/103 ( 8.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/103 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 ---E-VAVITLPNQLNHQERTTGFKETLEAEFPAIEVIAV-ED-GR-GDSLHSRRVAHQL 53 usage_00489.pdb 1 --GNVAILEGIPGVDNGEQRKGGALKAFAEYP-DIKIVAS-QS-AN-WETEQALNVTTNI 54 usage_00490.pdb 1 --GNVAILEGIPGVDNGEQRKGGALKAFAEYP-DIKIVAS-QS-AN-WETEQALNVTTNI 54 usage_00590.pdb 1 --GNVVIING-PPVSAIQNRVEGCESEFKKYP-DIKVLSSNQN-AK-GSREGGLEV-TSL 53 usage_00593.pdb 1 ---NVIYVNV-GGFAPLDKRDKMWQIIKWRFP-GIKEVAK-IGAVTGSTAADTQTRMEAA 54 usage_00727.pdb 1 GKIQFVLLKGEPGHPDAEARTTYVIKTLNEKGLPTQQLQL-DT-AM-WDTAQAKDKMDAW 57 usage_00844.pdb 1 -----ILLTGQPGSTSNIERTKGIRDELAAGGDKYKIVVD-QT-GN-WLRSEGLRIIESV 52 p R usage_00112.pdb 54 LED-Y-P-NLAGIFATEANGGVGVGDAVRLESRAGEI-QIISF 92 usage_00489.pdb 55 LTA-N-P-NINGIFAANDNMAIGAVTAVENAGLAGKV-LVSG- 92 usage_00490.pdb 55 LTA-N-P-NINGIFAANDNMAIGAVTAVENAGLAGKV-LVSGY 93 usage_00590.pdb 54 LAV-N-P-KIDGVFAINDPTAIGADLAAKQAQRNEF--FIVGV 91 usage_00593.pdb 55 MKE-K-P-EANAVLAMWDEFAKGAVRAIMQAGKSDQF-KVYS- 92 usage_00727.pdb 58 LSGPNAN-KIEVVIANNDAMAMGAVEALKAHNKTSVP-VFGV- 97 usage_00844.pdb 53 LPT-L-KEKPEVIISANDDMALGAIEALRSQGLKAGDILVTGF 93 l a d a Ga A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################