################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:36:45 2021 # Report_file: c_0147_14.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00261.pdb # 2: usage_00269.pdb # 3: usage_00335.pdb # 4: usage_00374.pdb # 5: usage_00439.pdb # 6: usage_00440.pdb # 7: usage_00441.pdb # 8: usage_00442.pdb # 9: usage_00443.pdb # 10: usage_00444.pdb # 11: usage_00445.pdb # 12: usage_00446.pdb # 13: usage_00574.pdb # 14: usage_00575.pdb # 15: usage_00618.pdb # 16: usage_00624.pdb # # Length: 128 # Identity: 55/128 ( 43.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/128 ( 54.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/128 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 -VKLQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYY 59 usage_00269.pdb 1 EVTLVESGGDSVKPGGSLKLSCAASGFTLSGETMSWVRQTPEKRLEWVATTLSGGGFTFY 60 usage_00335.pdb 1 -VKLVESGGGLVKLGGSLKLSCAASGFTFSSYYMSWVRQTPEKRLELVAAINSNGGNTYY 59 usage_00374.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGSYTYY 59 usage_00439.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00440.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00441.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00442.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00443.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00444.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00445.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00446.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFSRYDMSWVRQTPEKRLEWVATITSGDNYTYY 59 usage_00574.pdb 1 -VQLVESGGGLVKPGGSLKLSCAVSGFTFSDYAMSWIRQTPENRLEWVASINIGATYAYY 59 usage_00575.pdb 1 -VQLVESGGGLVKPGGSLKLSCAVSGFTFSDYAMSWIRQTPENRLEWVASINIGATYAYY 59 usage_00618.pdb 1 -VKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNSLYTSY 59 usage_00624.pdb 1 -VKLQESGGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYY 59 V L ESGG lV pGGSLkLSCA SGF fs y MsW RQTPE RLEwVA i Y usage_00261.pdb 60 PDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGG-------Y---YAMDYWGQ 109 usage_00269.pdb 61 SASVKGRFTISRDNAQNNLYLQLNSLRSEDTALYFCASH---------------RFVHWG 105 usage_00335.pdb 60 PDTVKGLFTISRDNAKNTLYLQMSRLKSEDTALYYCTRLYG-------NYVRIHTMDYWG 112 usage_00374.pdb 60 PDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRDG-------------NDYDYWG 106 usage_00439.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00440.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00441.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00442.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00443.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00444.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00445.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00446.pdb 60 PDSVKGRFTISRDNARNTLYLQMSRLRSEDTALYYCTRQGL-------L---YYAMDYWG 109 usage_00574.pdb 60 PDSVKGRFTISRDNAKNTLFLQMSSLGSEDTAMYYCARPGSPYEYDKA----YYSMAYWG 115 usage_00575.pdb 60 PDSVKGRFTISRDNAKNTLFLQMSSLGSEDTAMYYCARPGSPYEYDKA----YYSMAYWG 115 usage_00618.pdb 60 PDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHD--------------FFDVWG 105 usage_00624.pdb 60 PDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHEY-------Y---YAMDYWGQ 109 pd VKGrFTISRDNA N L LQms L SEDTA Y C r usage_00261.pdb 110 GTTVTVS- 116 usage_00269.pdb 106 HGTLVTV- 112 usage_00335.pdb 113 QGTSVTVS 120 usage_00374.pdb 107 QGTTLTV- 113 usage_00439.pdb 110 QGTSVNVS 117 usage_00440.pdb 110 QGTSVNVS 117 usage_00441.pdb 110 QGTSVNVS 117 usage_00442.pdb 110 QGTSVNVS 117 usage_00443.pdb 110 QGTSVNVS 117 usage_00444.pdb 110 QGTSVNVS 117 usage_00445.pdb 110 QGTSVNVS 117 usage_00446.pdb 110 QGTSVNVS 117 usage_00574.pdb 116 PGTSVTV- 122 usage_00575.pdb 116 PGTSVTV- 122 usage_00618.pdb 106 AGTTVTA- 112 usage_00624.pdb 110 GTTVTV-- 115 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################