################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:55 2021 # Report_file: c_0260_32.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00044.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00137.pdb # 7: usage_00174.pdb # 8: usage_00175.pdb # # Length: 140 # Identity: 35/140 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/140 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/140 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -CEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPE----L 55 usage_00022.pdb 1 --EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPE----L 54 usage_00044.pdb 1 APEQAQLLALLVKL-QAKKVIDIGTFTGYSAIA-GLALPKDGTLITCDVDEKSTA----L 54 usage_00069.pdb 1 -PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTN----V 55 usage_00070.pdb 1 -PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTN----V 55 usage_00137.pdb 1 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATA----I 56 usage_00174.pdb 1 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINE----GWTKH 56 usage_00175.pdb 1 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINE----GWTKH 56 E Q L AK GtFtGYS l aLP DG C usage_00021.pdb 56 GRPLWRQAEAEHKIDLRLKPALETLDELLAAG-----------EAGTFDVAVVDADKENC 104 usage_00022.pdb 55 GRPLWRQAEAEHKIDLRLKPALETLDELLAAG-----------EAGTFDVAVVDADKENC 103 usage_00044.pdb 55 AKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG-----------QAWQYDLIYIDADKANT 103 usage_00069.pdb 56 ARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY 115 usage_00070.pdb 56 ARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY 115 usage_00137.pdb 57 AKKYWQKAGVAEKISLRLGPALATLEQLTQGK-----------PLPEFDLIFIDADKRNY 105 usage_00174.pdb 57 AHPYWREAKQEHKIKLRLGPALDTLHSLLNEG-----------GEHQFDFIFIDADKTNY 105 usage_00175.pdb 57 AHPYWREAKQEHKIKLRLGPALDTLHSLLNEG-----------GEHQFDFIFIDADKTNY 105 W KI L L Al TL L D DADK N usage_00021.pdb 105 SAYYERCLQLLRPGGILAVL 124 usage_00022.pdb 104 SAYYERCLQLLRPGGILAVL 123 usage_00044.pdb 104 DLYYEESLKLLREGGLIAVD 123 usage_00069.pdb 116 PNYYPLILKLLKPGGLLIAD 135 usage_00070.pdb 116 PNYYPLILKLLKPGGLLIAD 135 usage_00137.pdb 106 PRYYEIGLNLLRRGGLMVID 125 usage_00174.pdb 106 LNYYELALKLVTPKGLIAID 125 usage_00175.pdb 106 LNYYELALKLVTPKGLIAID 125 YY L L G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################