################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:34 2021 # Report_file: c_1489_311.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00176.pdb # 2: usage_00538.pdb # 3: usage_00539.pdb # 4: usage_00540.pdb # 5: usage_00707.pdb # 6: usage_00708.pdb # 7: usage_00796.pdb # 8: usage_00801.pdb # 9: usage_00802.pdb # 10: usage_01216.pdb # 11: usage_03354.pdb # 12: usage_03355.pdb # 13: usage_03403.pdb # 14: usage_03404.pdb # 15: usage_03405.pdb # 16: usage_03774.pdb # 17: usage_04354.pdb # # Length: 20 # Identity: 1/ 20 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 20 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 20 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 LTEMVEKRLQQLQSDELSAV 20 usage_00538.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_00539.pdb 1 --EMVEKRLQQLQSDELSAV 18 usage_00540.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_00707.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_00708.pdb 1 --EMVEKRLQQLQSDELSAV 18 usage_00796.pdb 1 LTEMVEKRLQQLQSDELSAV 20 usage_00801.pdb 1 LTEMVEKRLQQLQSDELSAV 20 usage_00802.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_01216.pdb 1 -----IGEMKEATIQEARQ- 14 usage_03354.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_03355.pdb 1 LTEMVEKRLQQLQSDELSAV 20 usage_03403.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_03404.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_03405.pdb 1 -TEMVEKRLQQLQSDELSAV 19 usage_03774.pdb 1 LTEMVEKRLQQLQSDELSAV 20 usage_04354.pdb 1 -TEMVEKRLQQLQSDELSAV 19 ekrlqqlqsdElsa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################