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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:56:26 2021
# Report_file: c_0698_10.html
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#====================================
# Aligned_structures: 8
#   1: usage_00029.pdb
#   2: usage_00055.pdb
#   3: usage_00079.pdb
#   4: usage_00080.pdb
#   5: usage_00081.pdb
#   6: usage_00082.pdb
#   7: usage_00083.pdb
#   8: usage_00085.pdb
#
# Length:         74
# Identity:       15/ 74 ( 20.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     31/ 74 ( 41.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           15/ 74 ( 20.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00029.pdb         1  PTLWAREGDALRIHFTNA--GAHPHTIHFHGVHRATMDGTPGIG----AGSIAPGQSFTY   54
usage_00055.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00079.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00080.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00081.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00082.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00083.pdb         1  PTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-TGAL-------GGAKLTNVNPGEQATL   52
usage_00085.pdb         1  RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAA-TGQG-------GGAAATFTAPGRTSTF   52
                           ptl v EGD v     N    a PH vdFHga tg              t   PG   T 

usage_00029.pdb        55  EFDATPFGTHLYHC   68
usage_00055.pdb        53  RFKADRSGTFVYH-   65
usage_00079.pdb        53  RFKADRSGTFVYV-   65
usage_00080.pdb        53  RFKADRSGTFVYH-   65
usage_00081.pdb        53  RFKADRSGTFVYHC   66
usage_00082.pdb        53  RFKADRSGTFVYHC   66
usage_00083.pdb        53  RFKADRSGTFVYH-   65
usage_00085.pdb        53  SFKALQPGLYIYHC   66
                            FkA   Gt  Yh 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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