################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:28 2021 # Report_file: c_1452_427.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00423.pdb # 2: usage_00478.pdb # 3: usage_00479.pdb # 4: usage_00480.pdb # 5: usage_00558.pdb # 6: usage_01091.pdb # 7: usage_02953.pdb # 8: usage_03036.pdb # 9: usage_04279.pdb # 10: usage_04399.pdb # 11: usage_05086.pdb # 12: usage_05128.pdb # 13: usage_05129.pdb # 14: usage_05130.pdb # # Length: 21 # Identity: 0/ 21 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 21 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 21 ( 61.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00423.pdb 1 PHY-Y---SKA-IV---ILVV 13 usage_00478.pdb 1 PHY-N---SRA-TV---ILVA 13 usage_00479.pdb 1 PHY-N---SRA-TV---ILVA 13 usage_00480.pdb 1 PHY-N---SRA-TV---ILVA 13 usage_00558.pdb 1 -PL-YNQQKTH-VL---AV-- 13 usage_01091.pdb 1 PHY-N---SKA-IV---IMVI 13 usage_02953.pdb 1 PHY-N---LNA-NS---IIYA 13 usage_03036.pdb 1 LSV-P---AEV-TV---ILLD 13 usage_04279.pdb 1 AIK-N---SRASSVSRV---- 13 usage_04399.pdb 1 PHY-N---LNA-HN---IMYC 13 usage_05086.pdb 1 APKMD---GRN-MF---LVLA 14 usage_05128.pdb 1 PHF-N---SKA-IV---ILVI 13 usage_05129.pdb 1 PHF-N---SKA-IV---ILVI 13 usage_05130.pdb 1 PHF-N---SKA-IV---ILVI 13 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################