################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:28 2021 # Report_file: c_0699_152.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00616.pdb # 2: usage_01707.pdb # 3: usage_01708.pdb # 4: usage_01709.pdb # 5: usage_01710.pdb # # Length: 72 # Identity: 1/ 72 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 72 ( 27.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 72 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00616.pdb 1 VSVNATIKTNQNRTFEYWQTVEVKNGTYTVVLPYSHNSDYPVKP--ITPYHIKAG--NVV 56 usage_01707.pdb 1 RYHLEVEAG--NTL-VRNESHKN--CDFRVK--DLQY-------STDYTFKAYFHNGDYP 46 usage_01708.pdb 1 RYHLEVEAG--NTL-VRNESHKN--CDFRVK--DLQY-------STDYTFKAYFHNGDYP 46 usage_01709.pdb 1 RYILEVKSG--GSL-VKTFNQST--CKFVVD--NLYY-------STDYEFLVYFYNGEYL 46 usage_01710.pdb 1 RYILEVKSG--GSL-VKTFNQST--CKFVVD--NLYY-------STDYEFLVYFYNGEYL 46 ry lev g l v c f V l y dy f yf y usage_00616.pdb 57 KE---------- 58 usage_01707.pdb 47 GEPFILHHSTSG 58 usage_01708.pdb 47 GEPFILHHSTSG 58 usage_01709.pdb 47 GDPEIKPQST-- 56 usage_01710.pdb 47 GDPEIKPQST-- 56 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################