################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:27:53 2021 # Report_file: c_1116_11.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00065.pdb # 4: usage_00067.pdb # 5: usage_00158.pdb # 6: usage_00159.pdb # 7: usage_00160.pdb # 8: usage_00169.pdb # 9: usage_00170.pdb # 10: usage_00171.pdb # 11: usage_00172.pdb # 12: usage_00173.pdb # 13: usage_00268.pdb # 14: usage_00303.pdb # 15: usage_00330.pdb # 16: usage_00331.pdb # 17: usage_00494.pdb # 18: usage_00608.pdb # 19: usage_00612.pdb # 20: usage_00617.pdb # 21: usage_00618.pdb # 22: usage_00619.pdb # 23: usage_00620.pdb # 24: usage_00621.pdb # 25: usage_00622.pdb # 26: usage_00623.pdb # 27: usage_00624.pdb # 28: usage_00626.pdb # 29: usage_00977.pdb # 30: usage_01042.pdb # 31: usage_01135.pdb # 32: usage_01137.pdb # # Length: 82 # Identity: 15/ 82 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 82 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 82 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00062.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00065.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00067.pdb 1 TADQMVSALLDAEPPILYSE--------Y-D-----FSEASMMGLLTNLADRELVHMINW 46 usage_00158.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00159.pdb 1 TADQMVSALLDAEPPILYSE------------------EASMMGLLTNLADRELVHMINW 42 usage_00160.pdb 1 TADQMVSALLDAEPPILYSE-------------RP-FSEASMMGLLTNLADRELVHMINW 46 usage_00169.pdb 1 TADQMVSALLDAEPPILYSE--------Y----RP-FSEASMMGLLTNLADRELVHMINW 47 usage_00170.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00171.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00172.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00173.pdb 1 -SLPSINALLQAE-------VLSRQITNGDIRAKK-IA---SIADVCESMKEQLLVLVEW 48 usage_00268.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00303.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00330.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00331.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00494.pdb 1 -----VSHLLVAEPEKIYAM--------P-DPTVP-DSDIKALTTLCDLADRELVVIIGW 45 usage_00608.pdb 1 TADQMVSALLDAEPPILYSE--------------P-FSEASMMGLLTNLADRELVHMINW 45 usage_00612.pdb 1 TADQMVSALLDAEPPILYSE---------------YFSEASMMGLLTNLADRELVHMINW 45 usage_00617.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP--SEASMMGLLTNLADRELVHMINW 49 usage_00618.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00619.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00620.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00621.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00622.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00623.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00624.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_00626.pdb 1 TADQMVSALLDAEPPILYSE---------------Y--AS-MMGLLTNLADRELVHMINW 42 usage_00977.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_01042.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_01135.pdb 1 TADQMVSALLDAEPPILYSE--------Y-DPTRP-FSEASMMGLLTNLADRELVHMINW 50 usage_01137.pdb 1 TADQMVSALLDAEPPILYSE----------------FSEASMMGLLTNLADRELVHMINW 44 vsaLL AE l ladreLv i W usage_00061.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_00062.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_00065.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_00067.pdb 47 AKRVPGFVDLTLHDQVHL---- 64 usage_00158.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00159.pdb 43 AKRVPGFVDLTLHDQVHLLECA 64 usage_00160.pdb 47 AKRVPGFVDLTLHDQVHL---- 64 usage_00169.pdb 48 AKRVPGFVDLTLHDQVHLLECA 69 usage_00170.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00171.pdb 51 AKRVPGFVDLTLHDQVHLL--- 69 usage_00172.pdb 51 AKRVPGFVDLTLHDQVHLL--- 69 usage_00173.pdb 49 AKYIPAFCELPLDDQVALL--- 67 usage_00268.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_00303.pdb 51 AKRVPGFVDLTLHDQVHLLE-- 70 usage_00330.pdb 51 AKRVPGFVDLTLHDQVHLLE-- 70 usage_00331.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_00494.pdb 46 AKHIPGFSTLSLADQMSLLQSA 67 usage_00608.pdb 46 AKRVPGFVDLTLHDQVHLLECA 67 usage_00612.pdb 46 AKRVPGFVDLTLHDQVHLLECA 67 usage_00617.pdb 50 AKRVPGFVDLTLHDQVHLLECA 71 usage_00618.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00619.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00620.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00621.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00622.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00623.pdb 51 AKRVPGFVDLTLHDQVHLLEC- 71 usage_00624.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_00626.pdb 43 AKRVPGFVDLTLHDQVHLLECA 64 usage_00977.pdb 51 AKRVPGFVDLTLHDQVHLL--- 69 usage_01042.pdb 51 AKRVPGFVDLTLHDQVHL---- 68 usage_01135.pdb 51 AKRVPGFVDLTLHDQVHLLECA 72 usage_01137.pdb 45 AKRVPGFVDLTLHDQVHLLECA 66 AK PgF L L DQv L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################