################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:04 2021 # Report_file: c_0737_41.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00004.pdb # 2: usage_00028.pdb # 3: usage_00057.pdb # 4: usage_00365.pdb # 5: usage_00528.pdb # 6: usage_00664.pdb # 7: usage_00689.pdb # # Length: 81 # Identity: 18/ 81 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 81 ( 79.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 54 usage_00028.pdb 1 -AAMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 56 usage_00057.pdb 1 E--VVVIVKW-SGKEYPVDLTDQDTVEVLRHEIFRKTQVRPERQKLLNLKYKGKTAADNV 57 usage_00365.pdb 1 ---MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 54 usage_00528.pdb 1 -----IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 52 usage_00664.pdb 1 ---MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 54 usage_00689.pdb 1 ---MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY---SGKQMNDEK 54 ikVKt tGKEieiDieptDkVErikerveeKegipPqqQrLiy sGKqmnDek usage_00004.pdb 55 TAADYKILGGSVLHLVL-ALR 74 usage_00028.pdb 57 TAADYKILGGSVLHLV----- 72 usage_00057.pdb 58 KISAL-EL-KFKLMMVGSTE- 75 usage_00365.pdb 55 TAADYKILGGSVLHLV----- 70 usage_00528.pdb 53 TAADYKILGGSVLHLV----- 68 usage_00664.pdb 55 TAADYKILGGSVLHLVL-A-- 72 usage_00689.pdb 55 TAADYKILGGSVLHL------ 69 taady iL gsvLhl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################