################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:58 2021 # Report_file: c_0328_58.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00188.pdb # 2: usage_00196.pdb # 3: usage_00434.pdb # 4: usage_00527.pdb # 5: usage_00634.pdb # 6: usage_00642.pdb # # Length: 158 # Identity: 34/158 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/158 ( 21.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/158 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 --AWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRR 58 usage_00196.pdb 1 --AWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRR 58 usage_00434.pdb 1 YRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWR 60 usage_00527.pdb 1 YRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWR 60 usage_00634.pdb 1 --AWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRR 58 usage_00642.pdb 1 --AWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRR 58 AW G Y K YR A D R LG YE L Y R usage_00188.pdb 59 AHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVE----KMALVKLAKLHEQL 114 usage_00196.pdb 59 AHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVE----KMALVKLAKLHEQL 114 usage_00434.pdb 61 AYAVGDVEKMALVKLAKLHEQLTESEQAAQCYIKYIQDI---YSCESTAFRYLAQYYFKC 117 usage_00527.pdb 61 AYAVGDVEKMALVKLAKLHEQLTESEQAAQCYIKYIQDI---YSCESTAFRYLAQYYFKC 117 usage_00634.pdb 59 AHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVE----KMALVKLAKLHEQL 114 usage_00642.pdb 59 AHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVE----KMALVKLAKLHEQL 114 A LV L E L A CY A LA usage_00188.pdb 115 TESEQAAQCYIKYIQDIY--SCESTAFRYLAQYYFKCK 150 usage_00196.pdb 115 TESEQAAQCYIKYIQDIY--SCT--AFRYLAQYYFKCK 148 usage_00434.pdb 118 KLWDEASTCAQKCCAFNDTRE-E--GKALLRQILQLR- 151 usage_00527.pdb 118 KLWDEASTCAQKCCAFNDTRE-E--GKALLRQILQLR- 151 usage_00634.pdb 115 TESEQAAQCYIKYIQDIY--SCESTAFRYLAQYYFKCK 150 usage_00642.pdb 115 TESEQAAQCYIKYIQDIY--SCT--AFRYLAQYYFKCK 148 A C K L Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################