################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:05:55 2021 # Report_file: c_1138_22.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00066.pdb # 8: usage_00139.pdb # 9: usage_00344.pdb # 10: usage_00565.pdb # 11: usage_00667.pdb # 12: usage_00668.pdb # 13: usage_00669.pdb # 14: usage_00683.pdb # 15: usage_00684.pdb # 16: usage_00705.pdb # 17: usage_00707.pdb # 18: usage_00709.pdb # 19: usage_00710.pdb # 20: usage_00721.pdb # 21: usage_00740.pdb # 22: usage_00741.pdb # 23: usage_00873.pdb # 24: usage_00874.pdb # # Length: 151 # Identity: 114/151 ( 75.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/151 ( 75.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/151 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -----------------TQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 43 usage_00010.pdb 1 --YQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 58 usage_00056.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 59 usage_00057.pdb 1 -----------------TQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 43 usage_00058.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 59 usage_00059.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 59 usage_00066.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 60 usage_00139.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00344.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00565.pdb 1 --YQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 58 usage_00667.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00668.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00669.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 59 usage_00683.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 60 usage_00684.pdb 1 ----------------FTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 44 usage_00705.pdb 1 ----------------FTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 44 usage_00707.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 60 usage_00709.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00710.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00721.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00740.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00741.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 59 usage_00873.pdb 1 SYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALP 60 usage_00874.pdb 1 -YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALP 59 TQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVV ALP usage_00009.pdb 44 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 103 usage_00010.pdb 59 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 118 usage_00056.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 usage_00057.pdb 44 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 103 usage_00058.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 usage_00059.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 usage_00066.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00139.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00344.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00565.pdb 59 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 118 usage_00667.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00668.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00669.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 usage_00683.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00684.pdb 45 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 104 usage_00705.pdb 45 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 104 usage_00707.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00709.pdb 61 LLANEATVLFTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00710.pdb 61 LLANEATVLWTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00721.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00740.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00741.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 usage_00873.pdb 61 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 120 usage_00874.pdb 60 LLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT 119 LLANEATVL TFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVT usage_00009.pdb 104 YMAVVFWLMWFLA------------------ 116 usage_00010.pdb 119 YMAVVFWLMWFLASL---------------- 133 usage_00056.pdb 120 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 150 usage_00057.pdb 104 YMAVVFWLMWFLA------------------ 116 usage_00058.pdb 120 YMAVVFWLMWFLA------------------ 132 usage_00059.pdb 120 YMAVVFWLMWFLA------------------ 132 usage_00066.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00139.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00344.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00565.pdb 119 YMAVVFWLMWFLA------------------ 131 usage_00667.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00668.pdb 121 YMAVVFWLMWFLASLGLVLEAV--------- 142 usage_00669.pdb 120 YMAVVFWLMWFLA------------------ 132 usage_00683.pdb 121 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 151 usage_00684.pdb 105 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 135 usage_00705.pdb 105 YMAVVFWLMWFLASLGLVLEAV--------- 126 usage_00707.pdb 121 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 151 usage_00709.pdb 121 YMAVVFWLMWFLASLGLVLEAV--------- 142 usage_00710.pdb 121 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 151 usage_00721.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00740.pdb 121 YMAVVFWLMWFLASLGLVLEAVLFLLPWSFG 151 usage_00741.pdb 120 YMAVVFWLMWFLASLGLVLEAV--------- 141 usage_00873.pdb 121 YMAVVFWLMWFLA------------------ 133 usage_00874.pdb 120 YMAVVFWLMWFLASL---------------- 134 YMAVVFWLMWFLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################