################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:40 2021 # Report_file: c_1068_24.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00234.pdb # 2: usage_00412.pdb # 3: usage_00413.pdb # 4: usage_00414.pdb # 5: usage_00432.pdb # # Length: 63 # Identity: 7/ 63 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 63 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 63 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 VAACISAADLAVKGSNVTLVRVHM--AFGIGG-KCYMVVAGDVLDVAAAVATASLAAGAK 57 usage_00412.pdb 1 LTAAIEAADAMVASANVMLVGYEK--IG---SGLVTVIVRGDVGAVKAATDAGAAAARNV 55 usage_00413.pdb 1 LTAAIEAADAMVASANVMLVGYEK--IG---SGLVTVIVRGDVGAVKAATDAGAAAARNV 55 usage_00414.pdb 1 LTAAIEAADAMVASANVMLVGYEK--IG---SGLVTVIVRGDVGAVKAATDAGAAAARNV 55 usage_00432.pdb 1 PLEAMYALDAALKAADVEMCEFFAPPTE---TNFAGALLTGSQSACKAACDAFAEAVQSV 57 aai AaDa v anV lv v Gdv avkAA da a Aa v usage_00234.pdb 58 G-- 58 usage_00412.pdb --- usage_00413.pdb --- usage_00414.pdb --- usage_00432.pdb 58 ASN 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################