################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:38 2021 # Report_file: c_0959_55.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00035.pdb # 2: usage_00346.pdb # 3: usage_00347.pdb # 4: usage_00740.pdb # 5: usage_00741.pdb # 6: usage_00897.pdb # 7: usage_00898.pdb # 8: usage_00986.pdb # 9: usage_01143.pdb # 10: usage_01144.pdb # 11: usage_01145.pdb # 12: usage_01146.pdb # 13: usage_01287.pdb # 14: usage_01288.pdb # # Length: 84 # Identity: 0/ 84 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 84 ( 2.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/ 84 ( 83.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 ------------------------I----N---VLQEDSV----TLTCQG-A--RS---- 18 usage_00346.pdb 1 ------------------------T----A---ASLGQKV----TITCSASS--SV---- 19 usage_00347.pdb 1 ----------------------ANA----S---TVVGGDV----EFVCKVYSDA------ 21 usage_00740.pdb 1 -----------------TQ-SPSSL----S---ASVGDRV----TITCRASQ--SV---- 25 usage_00741.pdb 1 -----------------TQ-SPSSL----S---ASVGDRV----TITCRASQ--SV---- 25 usage_00897.pdb 1 -KYNPSRVEAFHRYGTTVNCIVEEV----DARSVYPYDEFVLATGDFVYM---------- 45 usage_00898.pdb 1 ------------------I-VITQDELSNP---VTSGESV----SISCRSSK--SLLYQD 32 usage_00986.pdb 1 ----------------------SSL----S---ASVGDRV----TITCRASQ--SV---- 21 usage_01143.pdb 1 ----------------------SSL----S---ASVGDRV----TITCR-----SV---- 18 usage_01144.pdb 1 M----------------TQ-SPSSL----S---ASVGDRV----TITCR-----SV---- 23 usage_01145.pdb 1 ----------------------SSL----S---ASVGDRV----TITCR-----SV---- 18 usage_01146.pdb 1 ----------------------SSL----S---ASVGDRV----TITCR------V---- 17 usage_01287.pdb 1 ----------------------SSL----S---ASVGDRV----TITCRASQ--SV---- 21 usage_01288.pdb 1 ----------------------SSL----S---ASVGDRV----TITCRASQ--SV---- 21 v c usage_00035.pdb 19 -PESDSIQWFHN---GNLIPT--- 35 usage_00346.pdb 20 ----SSLHWYQQKSGTSPKPWI-- 37 usage_00347.pdb 22 -Q--PHIQWIKHV---YLKVLK-- 37 usage_00740.pdb 26 -S--SAVAWYQQKPGKAPKLLIYS 46 usage_00741.pdb 26 -S--SAVAWYQQKPGKAPKLLIYS 46 usage_00897.pdb ------------------------ usage_00898.pdb 33 GK--TYLNWFLQRPGQSPQLLI-- 52 usage_00986.pdb 22 -S--SAVAWYQQKPGKAPKLLIYS 42 usage_01143.pdb 19 -S--SAVAWYQQKPGKAPKLL--- 36 usage_01144.pdb 24 -S--SAVAWYQQKPGKAPKLL--- 41 usage_01145.pdb 19 -S--SAVAWYQQKPGKAPKLL--- 36 usage_01146.pdb 18 -S--SAVAWYQQKPGKAPKLL--- 35 usage_01287.pdb 22 -S--SAVAWYQQKPGKAPKLLIYS 42 usage_01288.pdb 22 -S--SAVAWYQQKPGKAPKLLIYS 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################