################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:46 2021 # Report_file: c_1138_21.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00685.pdb # 2: usage_00686.pdb # 3: usage_00687.pdb # 4: usage_00688.pdb # 5: usage_00689.pdb # 6: usage_00690.pdb # 7: usage_00691.pdb # 8: usage_00692.pdb # 9: usage_00693.pdb # 10: usage_00694.pdb # 11: usage_00695.pdb # 12: usage_00696.pdb # 13: usage_00697.pdb # 14: usage_00698.pdb # 15: usage_00699.pdb # 16: usage_00700.pdb # 17: usage_00701.pdb # 18: usage_00702.pdb # 19: usage_00703.pdb # 20: usage_00704.pdb # # Length: 145 # Identity: 85/145 ( 58.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 115/145 ( 79.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/145 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00685.pdb 1 ---------MLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 51 usage_00686.pdb 1 --------YMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 52 usage_00687.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00688.pdb 1 ----------LTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 50 usage_00689.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00690.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00691.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00692.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00693.pdb 1 ----------LTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 50 usage_00694.pdb 1 ----------LTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 50 usage_00695.pdb 1 -----------TGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 49 usage_00696.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00697.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00698.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00699.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00700.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00701.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00702.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00703.pdb 1 --MVHVRSYMLTGQAIMLSYALNIATRYSAVRRQGQIDKNEPEVKVLEYQTQQHRLFPFI 58 usage_00704.pdb 1 SGMVKIRSQMAMEQGLFLAHALTIAARYSAVRRQGHLDDKQVEVKVLDYQTQQHRLFPSL 60 tgQaimLsyALnIAtRYSAVRRQGqiDknepEVKVLeYQTQQHRLFPfi usage_00685.pdb 52 ARAYAFQFAGAETVKLYER--D------------LHALTSGLKSVVTHQTGEGIEQARMA 97 usage_00686.pdb 53 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 101 usage_00687.pdb 50 ARAYAFQFAGAETVKLYERV-L------------LHALTSGLKSVVTHQTGEGIEQARMA 96 usage_00688.pdb 51 ARAYAFQFAGAETVKLYER--V------------LHALTSGLKSVVTHQTGEGIEQARMA 96 usage_00689.pdb 50 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00690.pdb 50 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00691.pdb 50 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00692.pdb 50 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00693.pdb 51 ARAYAFQFAGAETVKLYERV-L-----------DLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00694.pdb 51 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 99 usage_00695.pdb 50 ARAYAFQFAGAETVKLYERV-L----------ADLHALTSGLKSVVTHQTGEGIEQARMA 98 usage_00696.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKSGNVSLMADLHALTSGLKSVVTHQTGEGIEQARMA 118 usage_00697.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKS----LMADLHALTSGLKSVVTHQTGEGIEQARMA 114 usage_00698.pdb 59 ARAYAFQFAGAETVKLYERVLKEM-----SLMADLHALTSGLKSVVTHQTGEGIEQARMA 113 usage_00699.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKS----LMADLHALTSGLKSVVTHQTGEGIEQARMA 114 usage_00700.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKSGNVSLMADLHALTSGLKSVVTHQTGEGIEQARMA 118 usage_00701.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKSGNVSLMADLHALTSGLKSVVTHQTGEGIEQARMA 118 usage_00702.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKSG---LMADLHALTSGLKSVVTHQTGEGIEQARMA 115 usage_00703.pdb 59 ARAYAFQFAGAETVKLYERVLKEMKSGNVSLMADLHALTSGLKSVVTHQTGEGIEQARMA 118 usage_00704.pdb 61 ARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALTSGLKSVVAHETGEGIEQARMA 120 ARAYAFqFaGaETvkLYer LHALTSGLKSVVtHqTGEGIEQARMA usage_00685.pdb 98 CGGHGYSMASYISEIYGVAIG---- 118 usage_00686.pdb 102 CGGHGYSMASYISEIYGVAIG---- 122 usage_00687.pdb 97 CGGHGYSMASYISEIYGVAIG---- 117 usage_00688.pdb 97 CGGHGYSMASYISEIYGVAIG---- 117 usage_00689.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00690.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00691.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00692.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00693.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00694.pdb 100 CGGHGYSMASYISEIYGVAIG---- 120 usage_00695.pdb 99 CGGHGYSMASYISEIYGVAIG---- 119 usage_00696.pdb 119 CGGHGYSMASYISEIYGVAIGGCT- 142 usage_00697.pdb 115 CGGHGYSMASYISEIYGVAIGGCT- 138 usage_00698.pdb 114 CGGHGYSMASYISEIYGVAIGGCT- 137 usage_00699.pdb 115 CGGHGYSMASYISEIYGVAIGGCTY 139 usage_00700.pdb 119 CGGHGYSMASYISEIYGVAIGGCTY 143 usage_00701.pdb 119 CGGHGYSMASYISEIYGVAIGGCTY 143 usage_00702.pdb 116 CGGHGYSMASYISEIYGVAIGGCT- 139 usage_00703.pdb 119 CGGHGYSMASYISEIYGVAIGGCT- 142 usage_00704.pdb 121 CGGHGYSMASYISVVYGIAIGGCT- 144 CGGHGYSMASYISeiYGvAIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################