################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:03:12 2021 # Report_file: c_0550_15.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00005.pdb # 2: usage_00059.pdb # 3: usage_00180.pdb # 4: usage_00181.pdb # 5: usage_00182.pdb # 6: usage_00183.pdb # 7: usage_00184.pdb # 8: usage_00185.pdb # 9: usage_00186.pdb # 10: usage_00187.pdb # 11: usage_00188.pdb # 12: usage_00189.pdb # 13: usage_00190.pdb # 14: usage_00293.pdb # 15: usage_00294.pdb # 16: usage_00295.pdb # 17: usage_00421.pdb # 18: usage_00422.pdb # # Length: 214 # Identity: 49/214 ( 22.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/214 ( 32.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/214 ( 28.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -SFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 54 usage_00059.pdb 1 -SFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 54 usage_00180.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00181.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00182.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00183.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00184.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00185.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00186.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00187.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00188.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00189.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00190.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 usage_00293.pdb 1 --PELTRAVTNVVCALCFNSSYKRGDAEFESMLQYSQGIVDTV-A---KDSWLQ------ 48 usage_00294.pdb 1 -GPELTRAVTNVVCALCFNSSYKRGDAEFESMLQYSQGIVDTV-A---KD---------- 45 usage_00295.pdb 1 LSVVLMRAVTNVICRLVFSSSYQPSDPELQTVIQYNDGIVQTIAR--------G------ 46 usage_00421.pdb 1 -SFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 54 usage_00422.pdb 1 --FPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLV----DLVPWL 53 AVTNV cFn SYk gD E Y GI d usage_00005.pdb 55 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 106 usage_00059.pdb 55 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS-D- 107 usage_00180.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDN- 107 usage_00181.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 105 usage_00182.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 105 usage_00183.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDN- 107 usage_00184.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDN- 107 usage_00185.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 105 usage_00186.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS-D- 106 usage_00187.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 105 usage_00188.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS--- 105 usage_00189.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDN- 107 usage_00190.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS-D- 106 usage_00293.pdb 49 -IFPN----K-DLTILRQCISIRDKLLQKKYEEHKVTYSDNVQRDLLDALLRAKRSSEN- 101 usage_00294.pdb 46 -----SLV-DIDLTILRQCISIRDKLLQKKYEEHKVTYSDNVQRDLLDALLRAKRSSEN- 98 usage_00295.pdb 47 -G---LVDIK-DLKRLKECVSIRDQLLYKKLLEHKKSLTPGEPRDLLDALLIGQQRG-SG 100 usage_00421.pdb 55 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNS-Q- 107 usage_00422.pdb 54 KIFPN----K-TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDN- 107 k L L IR LL K e K LD L ak s usage_00005.pdb 107 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 158 usage_00059.pdb 108 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 159 usage_00180.pdb 108 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 159 usage_00181.pdb 106 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 157 usage_00182.pdb 106 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 157 usage_00183.pdb 108 -----G--DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 160 usage_00184.pdb 108 -----G--DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 160 usage_00185.pdb 106 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 157 usage_00186.pdb 107 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 158 usage_00187.pdb 106 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 157 usage_00188.pdb 106 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 157 usage_00189.pdb 108 -----Q--DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 160 usage_00190.pdb 107 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 158 usage_00293.pdb 102 -----NDV---GLTEDHVLMTVGDIFGAGVETTTTVLKWSIAYLVHNPQVQRKIQEELDS 153 usage_00294.pdb 99 -----NDV---GLTEDHVLMTVGDIFGAGVETTTTVLKWSIAYLVHNPQVQRKIQEELDS 150 usage_00295.pdb 101 GAD--------DITEDHVLMTAAEAFGAGVETTSTTLLWTIAFLLHHPQLQERVQAELDE 152 usage_00421.pdb 108 --------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 159 usage_00422.pdb 108 ---GDQ--DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 162 l H L T gdiFGAGVETTt v kW A L HnPQv k eE D usage_00005.pdb 159 NVGFSRTPTISDRNR------------------- 173 usage_00059.pdb 160 NVGFSRTPTISDRNR------------------- 174 usage_00180.pdb 160 NVGFSRTPTISDRNR------------------- 174 usage_00181.pdb 158 NVGFSRTPTISDRNRLL----------------- 174 usage_00182.pdb 158 NVGFSRTPTISDRNRLL----------------- 174 usage_00183.pdb 161 NVGFSRTPTISDRNRLL----------------- 177 usage_00184.pdb 161 NVGFSRTPTISDRNRLL----------------- 177 usage_00185.pdb 158 NVGFSRTPTISDRNR------------------- 172 usage_00186.pdb 159 NVGFSRTPTISDRNR------------------- 173 usage_00187.pdb 158 NVGFSRTPTISDRNRLL----------------- 174 usage_00188.pdb 158 NVGFSRTPTISDRNR------------------- 172 usage_00189.pdb 161 NVGFSRTPTISDRNRLLLLEATIREVLRLRP--- 191 usage_00190.pdb 159 NVGFSRTPTISDRNR------------------- 173 usage_00293.pdb 154 KIGKERHPQLSDRGNLP----------------- 170 usage_00294.pdb 151 KIGKERHPQLSDRGNLP----------------- 167 usage_00295.pdb 153 CVGVDRPPCLSDRPHLPLLDAVLCEVMRIRPVSP 186 usage_00421.pdb 160 NVGFSRTPTISDRNR------------------- 174 usage_00422.pdb 163 NVGFSRTPTISDRNRLLLLEATIREVLR------ 190 G R P SDR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################