################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:50 2021 # Report_file: c_1142_350.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00224.pdb # 2: usage_00391.pdb # 3: usage_00392.pdb # 4: usage_00498.pdb # 5: usage_00615.pdb # 6: usage_01914.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 41 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 -----HTLFPEGSA-E-EKVTLTCRARANP---PATYRWKM 31 usage_00391.pdb 1 -----RLHAVPA-A---NTVKFRCPAGGNP---MPTMRWLK 29 usage_00392.pdb 1 -----RLHAVPA-A---NTVKFRCPAGGNP---MPTMRWLK 29 usage_00498.pdb 1 -----NRIDFSN-S---TGAEIECKASGNP---MPEIIWIR 29 usage_00615.pdb 1 -----SLAQVPG-KHQHQLINAQN----GQ---PLPTVDV- 27 usage_01914.pdb 1 EREEKIILVSSA-N---EIDVRPCPLNP--NEHKGTITWYK 35 c w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################