################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:02 2021 # Report_file: c_0722_71.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00047.pdb # 2: usage_00102.pdb # 3: usage_00288.pdb # 4: usage_00433.pdb # 5: usage_00435.pdb # 6: usage_00590.pdb # 7: usage_00612.pdb # # Length: 71 # Identity: 4/ 71 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 71 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 71 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 -GFGGMSEVHLARD-LRD---HRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN-HPA 53 usage_00102.pdb 1 LGQGATANVFRGRH-KKT---GDLFAIKVFNNIS--FLR-PVDVQMREFEVLKKLN-HKN 52 usage_00288.pdb 1 IGKGSFGQVVKAYD-RVE---QEWVAIKIIKN-K----KAFLNQAQIEVRLLELMNK-YY 50 usage_00433.pdb 1 -GKGSFGEVFKGID-NRT---QKVVAIKIIDL-E--EAEDEIEDIQQEITVLSQCD-SPY 51 usage_00435.pdb 1 -LGKGNGSVELCRYDPLGDNTGALVAVKQL---------DQQRDFQREIQILKALH-SDF 49 usage_00590.pdb 1 IGEGSTGIVCIATV-RSS---GKLVAVKKMDL-R--K-QQRRELLFNEVVIMRDYQ-HEN 51 usage_00612.pdb 1 -GKGSFGEVFKGID-NRT---QKVVAIKIIDL-E--EAEDEIEDIQQEITVLSQCD-SPY 51 g g V vA K E usage_00047.pdb 54 IVAVYD----- 59 usage_00102.pdb 53 IVKLFAIEEE- 62 usage_00288.pdb 51 IVHLKRHFM-- 59 usage_00433.pdb 52 VTKYYGSYLKD 62 usage_00435.pdb 50 IVKYRGVSY-- 58 usage_00590.pdb 52 VVEMYNSYLVG 62 usage_00612.pdb 52 VTKYYGSYLKD 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################