################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:33 2021 # Report_file: c_0474_8.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00058.pdb # 2: usage_00059.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00113.pdb # 6: usage_00114.pdb # 7: usage_00121.pdb # # Length: 125 # Identity: 72/125 ( 57.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/125 ( 57.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/125 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 60 usage_00059.pdb 1 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 60 usage_00063.pdb 1 LAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK 60 usage_00064.pdb 1 LAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK 60 usage_00113.pdb 1 ----RSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK 56 usage_00114.pdb 1 ----RSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK 56 usage_00121.pdb 1 LAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK 60 R AVAGV P IMG GPVPAT KAL RAGL D IELNEAFAAQAL VL usage_00058.pdb 61 LSME--DQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAV 118 usage_00059.pdb 61 LSME--DQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAV 118 usage_00063.pdb 61 VL-DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 119 usage_00064.pdb 61 VL-DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 119 usage_00113.pdb 57 VL-DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 115 usage_00114.pdb 57 VL-DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 115 usage_00121.pdb 61 VL-DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 119 N GGAIALGHP G SGARI TL M FGL TMCIG GQGIA usage_00058.pdb 119 VVE-- 121 usage_00059.pdb 119 VVE-- 121 usage_00063.pdb 120 VFERV 124 usage_00064.pdb 120 VFERV 124 usage_00113.pdb 116 VFER- 119 usage_00114.pdb 116 VFER- 119 usage_00121.pdb 120 VFERV 124 V E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################