################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:32 2021 # Report_file: c_0471_11.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00051.pdb # 2: usage_00065.pdb # 3: usage_00066.pdb # 4: usage_00067.pdb # 5: usage_00068.pdb # 6: usage_00069.pdb # 7: usage_00070.pdb # 8: usage_00071.pdb # 9: usage_00072.pdb # 10: usage_00073.pdb # 11: usage_00074.pdb # 12: usage_00075.pdb # 13: usage_00125.pdb # 14: usage_00184.pdb # # Length: 126 # Identity: 9/126 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/126 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/126 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASL---------GEKLVRALFAVAREL 51 usage_00065.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00066.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00067.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00068.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00069.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LV-----EGARLVHELFELAKEK 53 usage_00070.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00071.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00072.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LVR----EGARLVHELFELAKEK 54 usage_00073.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LV-------ARLVHELFELAKEK 51 usage_00074.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LV-----EGARLVHELFELAKEK 53 usage_00075.pdb 1 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSE--LV-----EGARLVHELFELAKEK 53 usage_00125.pdb 1 KGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSE--LVRKYIGEGARLVHELFELAKEK 58 usage_00184.pdb 1 LILGIWGGKGQGKSFQCELVMAKMGINPIMMSA---G--------PAKLIRQRYREAADL 49 g ll GppG GKt aka a e natfi a Lv lf A e usage_00051.pdb 52 Q----PSIIFIDQVDSLLDAS------RR---LKTEFLIEFDGVQ------------RVL 86 usage_00065.pdb 55 A----PTIIFIDEIDAIG----AK-EVNR---TLMQLLAEMDGFD---------PRGNVK 93 usage_00066.pdb 55 A----PTIIFIDEIDAIG----AK-EVNR---TLMQLLAEMDGFD---------PRGNVK 93 usage_00067.pdb 55 A----PTIIFIDEIDAIG----AK---NR---TLMQLLAEMDGFD---------PRGNVK 91 usage_00068.pdb 55 A----PTIIFIDEIDAIG----AK-V-NR---TLMQLLAEMDGFD---------PRGNVK 92 usage_00069.pdb 54 A----PTIIFIDEIDAIG----AK-EVNR---TLMQLLAEMDGFD---------PRGNVK 92 usage_00070.pdb 55 A----PTIIFIDEIDAIG----AK-EVNR---TLMQLLAEMDGFD---------PRGNVK 93 usage_00071.pdb 55 A----PTIIFIDEIDAIG----AK---NR---TLMQLLAEMDGFD---------PRGNVK 91 usage_00072.pdb 55 A----PTIIFIDEIDAIG----AK-EVNR---TLMQLLAEMDGFD---------PRGNVK 93 usage_00073.pdb 52 A----PTIIFIDEIDAIG----AK---NR---TLMQLLAEMDGFD---------PRGNVK 88 usage_00074.pdb 54 A----PTIIFIDEIDAIG----AK---NR---TLMQLLAEMDGFD---------PRGNVK 90 usage_00075.pdb 54 A----PTIIFIDEIDAIG----AK---NR---TLMQLLAEMDGFD---------PRGNVK 90 usage_00125.pdb 59 A----PTIIFIDEIDAIG----AKE--REVNRTLMQLLAEMDGFD---------PRGNVK 99 usage_00184.pdb 50 IKKGKMCCLFINDL------TT-----QY---TVNNQMVNATLMNIADNKEENA---RVP 92 p iiFId t l e dg V usage_00051.pdb 87 VMGATN 92 usage_00065.pdb 94 VIAAT- 98 usage_00066.pdb 94 VIAAT- 98 usage_00067.pdb 92 VIAAT- 96 usage_00068.pdb 93 VIAAT- 97 usage_00069.pdb 93 VIAAT- 97 usage_00070.pdb 94 VIAAT- 98 usage_00071.pdb 92 VIAAT- 96 usage_00072.pdb 94 VIAAT- 98 usage_00073.pdb 89 VIAAT- 93 usage_00074.pdb 91 VIAAT- 95 usage_00075.pdb 91 VIAAT- 95 usage_00125.pdb 100 VIAATN 105 usage_00184.pdb 93 IICTG- 97 vi at #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################