################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:19 2021 # Report_file: c_1200_370.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00197.pdb # 2: usage_00619.pdb # 3: usage_00620.pdb # 4: usage_01214.pdb # 5: usage_01236.pdb # 6: usage_01623.pdb # 7: usage_02647.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 42 ( 11.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 42 ( 71.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00197.pdb 1 -------GKWTN------DLGSNMTIGAVNSRGEFTGTYTTA 29 usage_00619.pdb 1 ------MSAWVN------QDGSTLYINSINAQGELTGSYIN- 29 usage_00620.pdb 1 ------MSAWVN------QDGSTLYINSINAQGELTGSYIN- 29 usage_01214.pdb 1 RGEGGANLVLAYAGSSPLFVGKVIRI---------------- 26 usage_01236.pdb 1 -------GKWTN------DLGSNMTIGAVNSRGEFTGTYITA 29 usage_01623.pdb 1 --------KWTN------DLGSNMTIGAVNSRGEFTGTYITA 28 usage_02647.pdb 1 -------GKWTN------DLGSNMTIGAVNSRGEFTGTYTT- 28 w n Gs I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################