################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:33 2021 # Report_file: c_0447_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00078.pdb # 4: usage_00080.pdb # 5: usage_00081.pdb # 6: usage_00145.pdb # 7: usage_00149.pdb # 8: usage_00150.pdb # 9: usage_00151.pdb # # Length: 115 # Identity: 38/115 ( 33.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/115 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/115 ( 25.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 ---TEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 52 usage_00031.pdb 1 ---TEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 52 usage_00078.pdb 1 -QKLTVGLIGNPNSGKTTLFNQLTGARQ---------------KEGIFAT-TDHQVTLVD 43 usage_00080.pdb 1 MKSYEIALIGNPNVGKSTIFNALTGEN------VYIGTVEK--KEGEFEY-NGEKFKVVD 51 usage_00081.pdb 1 MKSYEIALIGNPNVGKSTIFNALTGEN------V----VEK--KEGEFEY-NGEKFKVVD 47 usage_00145.pdb 1 ---TEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 52 usage_00149.pdb 1 ---TEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 52 usage_00150.pdb 1 ---TEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 52 usage_00151.pdb 1 --MTEIALIGNPNSGKTSLFNLITGHNQRVGNW--PGV-TVERKSGLVKKNK--DLEIQD 53 eiaLIGNPN GK FN TG n K G D usage_00030.pdb 53 LPGIYSMSP---YSPEEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIET- 103 usage_00031.pdb 53 LPGIYSMSP---YSPEEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIET- 103 usage_00078.pdb 44 LPGTYSLTTISS---DEQIACHYILSGDADMLINVVDASNLERNLYLTLQLLELG 95 usage_00080.pdb 52 LPGVYSLTA---NSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMG 103 usage_00081.pdb 48 LPGVYSLTA---NSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMG 99 usage_00145.pdb 53 LPGIYSMSP---YSPEEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIET- 103 usage_00149.pdb 53 LPGIYSMSP---YSPEAKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIETG 104 usage_00150.pdb 53 LPGIYSMSP---YSPAEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIET- 103 usage_00151.pdb 54 LPGIYSMSP---YSPAEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIET- 104 LPG YS e ArdY D N VDAt LERNLYLT QL E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################