################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:15 2021 # Report_file: c_0547_17.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # # Length: 137 # Identity: 51/137 ( 37.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 121/137 ( 88.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/137 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 SAAEKTKIRSAWAPVYSNYETSGVDILVKFFTSTPAAQEFFPKFKGMTSADQLKKSADVR 60 usage_00086.pdb 1 -----------WPKIYKEYEQYSLNILLRFLKCFPQAQASFPKFST--KKSNLEQDPEVK 47 usage_00087.pdb 1 TDGDKKAINKIWPKIYKEYEQYSLNILLRFLKCFPQAQASFPKFST--KKSNLEQDPEVK 58 WpkiYkeYEqyslnILlrFlkcfPqAQasFPKFst kksnLeqdpeVk usage_00085.pdb 61 WHAERIINAVNDAVASMDDTEKMSMKLRDLSGKHAKSFQVDPQYFKVLAAVIADTVAAG- 119 usage_00086.pdb 48 HQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQKHKTVFKVDSIWFKELSSIFVSTID--G 105 usage_00087.pdb 59 HQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQKHKTVFKVDSIWFKELSSIFVSTID--G 116 hqAvvIfNkVNeiinSMDnqEeiiksLkDLSqKHktvFkVDsiwFKeLssifvsTid usage_00085.pdb 120 DAGFEKLMSMICILLRS 136 usage_00086.pdb 106 GAEFEKLFSIICILLRS 122 usage_00087.pdb 117 GAEFEKLFSIICILLRS 133 gAeFEKLfSiICILLRS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################