################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:42 2021 # Report_file: c_1296_44.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00052.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00347.pdb # 5: usage_00348.pdb # 6: usage_00354.pdb # 7: usage_00355.pdb # 8: usage_00745.pdb # 9: usage_00774.pdb # 10: usage_00993.pdb # 11: usage_00996.pdb # 12: usage_01258.pdb # 13: usage_01261.pdb # 14: usage_01262.pdb # 15: usage_01317.pdb # 16: usage_01319.pdb # 17: usage_01320.pdb # 18: usage_01472.pdb # 19: usage_01473.pdb # 20: usage_01474.pdb # 21: usage_01475.pdb # 22: usage_01556.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 54 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 54 ( 61.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -------GKSR--------DSLRAFTRTFIAVPASNSGLCIVNDELFVRN---- 35 usage_00345.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVE----- 30 usage_00346.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVE----- 30 usage_00347.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_00348.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_00354.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_00355.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_00745.pdb 1 ------YLVSKLIKKVSESF-SHTGIIVKW----------GEHTLIE------- 30 usage_00774.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGV------ 29 usage_00993.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVE----- 30 usage_00996.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01258.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVL- 34 usage_01261.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01262.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01317.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_01319.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_01320.pdb 1 -QVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 34 usage_01472.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01473.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01474.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 usage_01475.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVE----- 30 usage_01556.pdb 1 FQVEYAMKAVE--------N-SSTAIGIRC----------KDGVVFGVEKLVLS 35 s t i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################