################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:09 2021 # Report_file: c_1445_841.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00274.pdb # 2: usage_00957.pdb # 3: usage_02139.pdb # 4: usage_06353.pdb # 5: usage_07968.pdb # 6: usage_09663.pdb # 7: usage_13276.pdb # 8: usage_14495.pdb # 9: usage_15949.pdb # 10: usage_17672.pdb # # Length: 22 # Identity: 1/ 22 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 22 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 22 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00274.pdb 1 --GYLYVEQSKTGVKIAIPTA- 19 usage_00957.pdb 1 FGEVWMGTWN-GTTRVAIKTLK 21 usage_02139.pdb 1 -GTVYKGKW---HGDVAVKML- 17 usage_06353.pdb 1 --EVWMGTWN-GTTRVAIKT-- 17 usage_07968.pdb 1 -GEVYKGR---REIYVAIKTL- 17 usage_09663.pdb 1 -GVVKYGKWR-GQYDVAIKMI- 19 usage_13276.pdb 1 -GEVWMGTWN-GTTRVAIKTL- 19 usage_14495.pdb 1 -GVVKYGKWR-GQYDVAIKMI- 19 usage_15949.pdb 1 --LVHLGYWL-NKDKVAIKTI- 18 usage_17672.pdb 1 FGEVWMGTWN-GTTRVAIKTLK 21 v g vAik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################