################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:20 2021 # Report_file: c_1228_86.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00177.pdb # 2: usage_00366.pdb # 3: usage_00383.pdb # 4: usage_00384.pdb # 5: usage_00501.pdb # 6: usage_00502.pdb # 7: usage_00520.pdb # 8: usage_00583.pdb # 9: usage_00588.pdb # 10: usage_00601.pdb # 11: usage_00677.pdb # 12: usage_00821.pdb # # Length: 88 # Identity: 0/ 88 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 88 ( 1.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/ 88 ( 73.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 ------AIIIAADR----------SVN-KDRF------IGKK---------------LLS 22 usage_00366.pdb 1 ------VAIYSSD-----------------------------YSSLDDAVFRSY-IDDEY 24 usage_00383.pdb 1 ------PVVMLTARG----------------------ET---------------G-ADDY 16 usage_00384.pdb 1 ------PVVMLTA-------------------------T---------------G-ADDY 13 usage_00501.pdb 1 ------PVVAVT--------------------------G---------------G-CEAY 12 usage_00502.pdb 1 ------PIIMLTAKD-S----E-I------DKVIGL-EI---------------G-ADDY 25 usage_00520.pdb 1 ------PVCVLSARVD---DRV-A------GL-----EA---------------G-ADDY 23 usage_00583.pdb 1 ------PLILLFS-------------------------------------------ADDY 11 usage_00588.pdb 1 ------SIIAITAD----------TIDDDR---------------------PGAE-LDEY 22 usage_00601.pdb 1 AIVLTAKNAPDAK-I---G---LQ--------------E---------------Y-VVDY 23 usage_00677.pdb 1 ------PALFLTARD-SLQDKI-A------GL---T-LG---------------G--DDY 25 usage_00821.pdb 1 ------PVVAVTA-----------------------IRG---------------G-CEAY 15 y usage_00177.pdb 23 VGVQD---GIR-KPEELIQKAL------ 40 usage_00366.pdb 25 MGHK-------WQCVEFARRFLFL-NYG 44 usage_00383.pdb 17 ITKPFSPK----ELVARIKAVM------ 34 usage_00384.pdb 14 ITKPFSPK----ELVARIKAVM------ 31 usage_00501.pdb 13 ISKPISVV----HFLETIKRLL------ 30 usage_00502.pdb 26 VTKPFSTR----ELLARVKANLRR---- 45 usage_00520.pdb 24 LVKPFVLA----ELVARVKALLRR-RGS 46 usage_00583.pdb 12 LTKPFNRN----DLLSRIEIHLRT-QN- 33 usage_00588.pdb 23 VSKPLNPN----QLRDVVLTCHS----- 41 usage_00601.pdb 24 ITKPFDNE----DLIEKTTFFGFVRNQ- 46 usage_00677.pdb 26 VTKPFSLE----EVVARLRVILRR-A-- 46 usage_00821.pdb 16 ISKPISVV----HFLETIKRLL------ 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################