################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:22 2021 # Report_file: c_1135_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00367.pdb # 2: usage_00684.pdb # 3: usage_00964.pdb # 4: usage_01360.pdb # 5: usage_01361.pdb # # Length: 82 # Identity: 75/ 82 ( 91.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 82 ( 91.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 82 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00367.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ-R-- 56 usage_00684.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ-R-- 56 usage_00964.pdb 1 GPLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ---G 57 usage_01360.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYG 59 usage_01361.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYG 59 PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ usage_00367.pdb 57 --YGSTQATFMVFQALAQYQKD 76 usage_00684.pdb 57 -GYGSTQATFMVFQALAQYQKD 77 usage_00964.pdb 58 GGYGSTQATFMVFQALAQYQKD 79 usage_01360.pdb 60 GGYGSTQATFMVFQALAQYQKD 81 usage_01361.pdb 60 GGYGSTQATFMVFQALAQYQKD 81 YGSTQATFMVFQALAQYQKD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################