################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:51:16 2021 # Report_file: c_0069_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00040.pdb # 5: usage_00077.pdb # 6: usage_00161.pdb # 7: usage_00162.pdb # 8: usage_00163.pdb # # Length: 262 # Identity: 245/262 ( 93.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 245/262 ( 93.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/262 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00013.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00014.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00040.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00077.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00161.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00162.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 usage_00163.pdb 1 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 60 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL usage_00012.pdb 61 SNVATAPVAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR----NREAMETA 116 usage_00013.pdb 61 SNVATAP-APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN-GD-REAMETA 117 usage_00014.pdb 61 SNVATAP-APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL---GD-REAMETA 115 usage_00040.pdb 61 SNVATA---PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR--GD-REAMETA 114 usage_00077.pdb 61 SNVATAPSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDGD-REAMETA 119 usage_00161.pdb 61 SNVATAP-APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL------REAMETA 113 usage_00162.pdb 61 SNVATAPSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL------REAMETA 114 usage_00163.pdb 61 SNVATAPSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-----REAMETA 115 SNVATA PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL REAMETA usage_00012.pdb 117 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 176 usage_00013.pdb 118 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 177 usage_00014.pdb 116 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 175 usage_00040.pdb 115 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 174 usage_00077.pdb 120 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 179 usage_00161.pdb 114 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 173 usage_00162.pdb 115 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 174 usage_00163.pdb 116 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 175 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG usage_00012.pdb 177 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 235 usage_00013.pdb 178 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 236 usage_00014.pdb 176 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 234 usage_00040.pdb 175 ALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-------WEGHRSKVPLYQRDSSAAEVS 227 usage_00077.pdb 180 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 238 usage_00161.pdb 174 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 232 usage_00162.pdb 175 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 233 usage_00163.pdb 176 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSKVPLYQRDSSAAEVS 234 ALEGLTRSAALELAPLQIRVNGVGPGLSVLV WEGHRSKVPLYQRDSSAAEVS usage_00012.pdb 236 DVVIFLCSSKAKYITGTCVKVD 257 usage_00013.pdb 237 DVVIFLCSSKAKYITGTCVKVD 258 usage_00014.pdb 235 DVVIFLCSSKAKYITGTCVKVD 256 usage_00040.pdb 228 DVVIFLCSSKAKYITGTCVKVD 249 usage_00077.pdb 239 DVVIFLCSSKAKYITGTCVKVD 260 usage_00161.pdb 233 DVVIFLCSSKAKYITGTCVKVD 254 usage_00162.pdb 234 DVVIFLCSSKAKYITGTCVKVD 255 usage_00163.pdb 235 DVVIFLCSSKAKYITGTCVKVD 256 DVVIFLCSSKAKYITGTCVKVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################