################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:42 2021 # Report_file: c_0897_6.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00023.pdb # 2: usage_00088.pdb # 3: usage_00090.pdb # 4: usage_00113.pdb # 5: usage_00114.pdb # 6: usage_00115.pdb # 7: usage_00116.pdb # 8: usage_00147.pdb # 9: usage_00149.pdb # 10: usage_00150.pdb # 11: usage_00151.pdb # 12: usage_00205.pdb # 13: usage_00206.pdb # 14: usage_00207.pdb # 15: usage_00228.pdb # # Length: 78 # Identity: 10/ 78 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 78 ( 29.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 78 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00088.pdb 1 -GEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 56 usage_00090.pdb 1 TACEKQTIGKIAQVLAKSPEAYGAECLARLFVTHPGSKSYFE---YKD--Y--SAAGAKV 53 usage_00113.pdb 1 SAEEKQLITGLWGKV--NVADCGAEALARLLIVYPWTQRFFSSFGN-LSSPTAILGNPMV 57 usage_00114.pdb 1 SAEEKQLITGLWGKV--NVADCGAEALARLLIVYPWTQRFFSSFGN-LSSPTAILGNPMV 57 usage_00115.pdb 1 SAEEKQLITGLWGKV--NVADCGAEALARLLIVYPWTQRFFSSFGN-LSSPTAILGNPMV 57 usage_00116.pdb 1 SAEEKQLITGLWGKV--NVADCGAEALARLLIVYPWTQRFFSSFGN-LSSPTAILGNPMV 57 usage_00147.pdb 1 TSEEKQYITSLWAKV--NVGEVGGEALARLLIVYPWTQRFFASFGN-LSSANAILHNAKV 57 usage_00149.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00150.pdb 1 -GEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 56 usage_00151.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00205.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00206.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00207.pdb 1 SGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGD-LSNPGAVMGNPKV 57 usage_00228.pdb 1 SDKDKAAVRALWSKIGKSSDAIGNDALSRMIVVYPQTKIYFSHWPD-V-----TPGSPNI 54 eK lw k G eaL Rl vyP t F v usage_00023.pdb 58 KAHGKKVLHSFGEGVHH- 74 usage_00088.pdb 57 KAHGKKVLHSFGEGVHH- 73 usage_00090.pdb 54 QVHGGKVIRAVVKAAEH- 70 usage_00113.pdb 58 RAHGKKVLTSFGDAVKN- 74 usage_00114.pdb 58 RAHGKKVLTSFGDAVKN- 74 usage_00115.pdb 58 RAHGKKVLTSFGDAVKN- 74 usage_00116.pdb 58 RAHGKKVLTSFGDAVKN- 74 usage_00147.pdb 58 LAHGQKVLTSFGEAVKN- 74 usage_00149.pdb 58 KAHGKKVLHSFGEGVHH- 74 usage_00150.pdb 57 KAHGKKVLHSFGEGVHH- 73 usage_00151.pdb 58 KAHGKKVLHSFGEGVHH- 74 usage_00205.pdb 58 KAHGKKVLHSFGEGVHH- 74 usage_00206.pdb 58 KAHGKKVLHSFGEGVHHL 75 usage_00207.pdb 58 KAHGKKVLHSFGEGVHH- 74 usage_00228.pdb 55 KAHGKKVMGGIALAVSK- 71 aHG KV v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################