################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:22 2021 # Report_file: c_0077_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_00072.pdb # 6: usage_00090.pdb # 7: usage_00234.pdb # # Length: 208 # Identity: 56/208 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/208 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/208 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 --------VVPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 51 usage_00057.pdb 1 -VEEEIKRVVPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 58 usage_00058.pdb 1 ---------VPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 50 usage_00059.pdb 1 SVEEEIKRVVPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 59 usage_00072.pdb 1 ---------VPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGGV-DPAMPE 50 usage_00090.pdb 1 --------VVPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 51 usage_00234.pdb 1 -VEEEIKRVVPMIQAVSKEV-KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAE 58 VPmIqavskev klpISiDTykAeVAKqAieAGAhiINDiWGak ePkiaE usage_00056.pdb 52 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 105 usage_00057.pdb 59 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 112 usage_00058.pdb 51 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 104 usage_00059.pdb 60 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 113 usage_00072.pdb 51 VAAEFGAGLVCAHTYGTTTR-------GVVDAVISQVTAAAERAVAAGVAREKVLIDPA- 102 usage_00090.pdb 52 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 105 usage_00234.pdb 59 VAAHYDVPIILMHN------RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGI 112 VAAhydvpiilmHn nlmadmIadlydsikiAkdAGVrdEniilDPg usage_00056.pdb 106 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 163 usage_00057.pdb 113 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 170 usage_00058.pdb 105 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 162 usage_00059.pdb 114 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 171 usage_00072.pdb 103 -HDFGKNTFHGLLLLRHVADLVMTGWPVLMALS---------------RLEGTLAATALA 146 usage_00090.pdb 106 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 163 usage_00234.pdb 113 GFAKT--PEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 170 fakt peqnLeamRnleqLnvlGyPVLlgtS RLEGTgAtvcLg usage_00056.pdb 164 IEKGCEFVRVHDVKEMSRMAKMMDAM-- 189 usage_00057.pdb 171 IEKGCEFVRVHDVKEMSRMAKMMDAM-- 196 usage_00058.pdb 163 IEKGCEFVRVHDVKEMSRMAKMMDAM-- 188 usage_00059.pdb 172 IEKGCEFVRVHDVKEMSRMAKMMDAM-- 197 usage_00072.pdb 147 AAAGARMFRVHEVAATRRVLEMVASIQG 174 usage_00090.pdb 164 IEKGCEFVRVHDVKEMSRMAKMMDAMIG 191 usage_00234.pdb 171 IEKGCEFVRVHDVKEMSRMAKMMDAM-- 196 iekGcefvRVHdVkemsRmakMmdam #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################