################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:53 2021 # Report_file: c_1378_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00439.pdb # 2: usage_00440.pdb # 3: usage_00441.pdb # 4: usage_00447.pdb # 5: usage_00448.pdb # 6: usage_00449.pdb # 7: usage_00450.pdb # 8: usage_00711.pdb # 9: usage_01028.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 61 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 61 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00439.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00440.pdb 1 -TMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 53 usage_00441.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00447.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00448.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00449.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00450.pdb 1 GTMSLYYYVPTKEDLVELMVDEVIGET-----RLPD-RPGPDWRAALTLAANEKRALWLR 54 usage_00711.pdb 1 AKKTLYRFASGRADLIGLLVESWIAPI----FP---EADPQDAAAALERIVYDIAQAV-- 51 usage_01028.pdb 1 -----YWHVKNKRALLDALAVEILARHHDYS-LPAA-G--ESWQSFLRNNAMSFRRALLR 51 Y v k dL l v e i dw aaL a r usage_00439.pdb 55 H 55 usage_00440.pdb 54 H 54 usage_00441.pdb 55 H 55 usage_00447.pdb 55 H 55 usage_00448.pdb 55 H 55 usage_00449.pdb 55 H 55 usage_00450.pdb - usage_00711.pdb - usage_01028.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################