################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:44 2021 # Report_file: c_0121_10.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00003.pdb # 2: usage_00063.pdb # 3: usage_00090.pdb # 4: usage_00091.pdb # 5: usage_00110.pdb # 6: usage_00121.pdb # 7: usage_00157.pdb # 8: usage_00186.pdb # 9: usage_00203.pdb # 10: usage_00210.pdb # 11: usage_00211.pdb # 12: usage_00313.pdb # 13: usage_00323.pdb # 14: usage_00359.pdb # 15: usage_00494.pdb # 16: usage_00496.pdb # # Length: 124 # Identity: 46/124 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/124 ( 58.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/124 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQY 59 usage_00063.pdb 1 --QLQQSGAELLKPGASVKLSCIVSGFKIKDTSMHWVKQRPEQGLEWIGRIDPANDNSEY 58 usage_00090.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLEWIGRIDPASGNTKY 59 usage_00091.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLEWIGRIDPASGNTKY 59 usage_00110.pdb 1 -IQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWIGLIDPENGNTIY 59 usage_00121.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKY 59 usage_00157.pdb 1 -VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEY 59 usage_00186.pdb 1 --QLQQSGAELVRSGASVKLSCATSDFNIKDYYIHWVRQRPEQGLEWIGWLDPENGDTES 58 usage_00203.pdb 1 -VQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKY 59 usage_00210.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYLHWVKQRPEHGLEWIGRIDPANGNAKY 59 usage_00211.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYLHWVKQRPEHGLEWIGRIDPANGNAKY 59 usage_00313.pdb 1 -VQLQQSGAELVRPGASVKLSCTASGFNIKDDFMHWVKQRPEQGLEWIGRIDPANDNTKY 59 usage_00323.pdb 1 --RLHQSAAQLVQPGASVRLSCTTSGFNFKDSYLHWVKQRPAQGLEWIGRIDTGNGNVKF 58 usage_00359.pdb 1 QVQLQQSGDELVKPGASVKLSCTVSGFNIKDDFIHWMKQRPEQGLEWIGRIDPANGYTKY 60 usage_00494.pdb 1 -VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKY 59 usage_00496.pdb 1 -KLLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKY 59 L QSgaeLv GAsV LSC SgFniKD Wv qRPe GLEWIG iDp usage_00003.pdb 60 DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDY-------SYALDSWGQGTS 112 usage_00063.pdb 59 DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTLS-------------HFWGQGTT 105 usage_00090.pdb 60 DPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCAGYDY-------GNF-DYWGQGTT 111 usage_00091.pdb 60 DPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCAGYDY-------GNF-DYWGQGTT 111 usage_00110.pdb 60 DPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARDNS-------YYF-DYWGQGTT 111 usage_00121.pdb 60 DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLY--D-YY-A-M-DYWGQGTS 113 usage_00157.pdb 60 VPTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVITM-----A-M-DYWGQGTT 112 usage_00186.pdb 59 APKFQGKATMTADTSSNTAYLQLSSLTSEASAVYYCNAISTT-RDYY-A-L-DYWGQGTS 114 usage_00203.pdb 60 VPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGYY-VSDY-A-M-AYWGQGTS 115 usage_00210.pdb 60 DPKFQDKATITADTSSNTAYLQLNSLTSEDTAVYYCSNRQLGLRGYYYA-M-DYWGQGTS 117 usage_00211.pdb 60 DPKFQDKATITADTSSNTAYLQLNSLTSEDTAVYYCSNRQLGLRGYYYA-M-DYWGQGTS 117 usage_00313.pdb 60 APKFQDKATIIADTSSNTAYLQLSSLTSEDTAVYYCARRELY-SYYS-P-L-DVWGAGTT 115 usage_00323.pdb 59 DPKFQDKATITTDIPSMTAYLHLSNLTSEDTAVYYCVPYGY-------G-F-HSWGDGTT 109 usage_00359.pdb 61 APKFQDKATMTADTSSNTAYLQLSSLASEDAAVYYCATY---------G-V-AYWGQGTL 109 usage_00494.pdb 60 DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLY--D-YY-A-M-DYWGQGTS 113 usage_00496.pdb 60 DPKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWE-------G-F-AYWGQGTL 110 PkFQ Kat taDtsSnTAYL L sLtSed AVYYC WG GT usage_00003.pdb 113 VTVS 116 usage_00063.pdb 106 LTVS 109 usage_00090.pdb 112 LTVS 115 usage_00091.pdb 112 LTV- 114 usage_00110.pdb 112 LTVS 115 usage_00121.pdb 114 VTVS 117 usage_00157.pdb 113 VTTS 116 usage_00186.pdb 115 VTVS 118 usage_00203.pdb 116 VTVS 119 usage_00210.pdb 118 VSVS 121 usage_00211.pdb 118 VSVS 121 usage_00313.pdb 116 VTVP 119 usage_00323.pdb 110 LTVS 113 usage_00359.pdb 110 VTV- 112 usage_00494.pdb 114 VTVS 117 usage_00496.pdb 111 VTVS 114 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################