################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:42 2021 # Report_file: c_0109_14.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00010.pdb # # Length: 235 # Identity: 82/235 ( 34.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 209/235 ( 88.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/235 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 LVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVD--QDAAATEAAGMRLGGLLYQ 58 usage_00002.pdb 1 --------------------PVERRAEFQDIAEAMMRVD--QDAAATEAAGMRLGGLLYQ 38 usage_00003.pdb 1 --------------------PVERRAEFQDIAEAMMRVD--QDAAATEAAGMRLGGLLYQ 38 usage_00010.pdb 1 ----FAHPLPIKVICELLGVDEAARGAFGRWSSEILVMDPERA-EQRGQAAREVVNFILD 55 pverRaeFqdiaeammrvD qd aateaAgmrlggllyq usage_00001.pdb 59 LVQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLL 117 usage_00002.pdb 39 LVQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLL 97 usage_00003.pdb 39 LVQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLL 97 usage_00010.pdb 56 LVERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLL 115 LVqeRRanPGDDLiSALItteDpDg vvddmfLmnaAgtLLiAahdttacmIGlGTaLLL usage_00001.pdb 118 DSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVL 177 usage_00002.pdb 98 DSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVL 157 usage_00003.pdb 98 DSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVL 157 usage_00010.pdb 116 THPDQLALVRADPSALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANG 174 dsPDQLALlReDPSlvgNAVEElLRYltigq ggeRvAtrdVElGGVrIakgeqVvahvl usage_00001.pdb 178 AADFDPAFVEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR- 231 usage_00002.pdb 158 AADFDPAFVEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 212 usage_00003.pdb 158 AADFDPAFVEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR- 211 usage_00010.pdb 175 AANRDPSQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 229 AAdfDPafveePeRFDiTRrpapHLaFGfGaHqCiGqqLAriElqivfetLFrR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################