################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:28:08 2021 # Report_file: c_1175_35.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00108.pdb # 2: usage_00133.pdb # 3: usage_00216.pdb # 4: usage_00232.pdb # 5: usage_00251.pdb # 6: usage_00265.pdb # 7: usage_00281.pdb # 8: usage_00443.pdb # 9: usage_00444.pdb # 10: usage_00445.pdb # 11: usage_00446.pdb # 12: usage_00447.pdb # 13: usage_00448.pdb # 14: usage_00449.pdb # 15: usage_00450.pdb # 16: usage_00451.pdb # 17: usage_00452.pdb # 18: usage_00453.pdb # 19: usage_00454.pdb # 20: usage_00506.pdb # 21: usage_00507.pdb # 22: usage_00508.pdb # 23: usage_00509.pdb # 24: usage_00685.pdb # 25: usage_00700.pdb # 26: usage_00754.pdb # 27: usage_00765.pdb # 28: usage_00766.pdb # 29: usage_00767.pdb # 30: usage_00885.pdb # 31: usage_01220.pdb # 32: usage_01251.pdb # # Length: 63 # Identity: 3/ 63 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 63 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 63 ( 68.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 --SIVGRP-R--------H----------Q-------DSY---VGDEAQSKR-GILTLK- 27 usage_00133.pdb 1 ----VGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 34 usage_00216.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00232.pdb 1 QAKGLIQV----------G---KWNPVPL----SYVTDAPDATVADMLQDVY-HVVTLKI 42 usage_00251.pdb 1 --SIVGRP-R---------------------------DSY---VGDEAQSKR-GILTLK- 25 usage_00265.pdb 1 --SIVGRP-R--------H--------QK--------DSY---VGDEAQSKR-GILTLK- 28 usage_00281.pdb 1 --SCIAIK-EVMKGVDDL-------------------DFF---IGDEAI--EKPTYATK- 32 usage_00443.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00444.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00445.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00446.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00447.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00448.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00449.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00450.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00451.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00452.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00453.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00454.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00506.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00507.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00508.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00509.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00685.pdb 1 --SIVGRP-R--------H----------TGVM----DSY---VGDEAQSKR-GILTLK- 30 usage_00700.pdb 1 --SIVGRP-R--------H------------------DSY---VGDEAQSKR-GILTLK- 26 usage_00754.pdb 1 ---IVGRPG------------------QK--------DSY---VGDEAQS----ILTLK- 23 usage_00765.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00766.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00767.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_00885.pdb 1 --SIVGRP-R--------HQGVMVGMGQK--------DSY---VGDEAQSKR-GILTLK- 36 usage_01220.pdb 1 --SIVGRP-R---------------------------DSY---VGDEAQSKR-GILTLK- 25 usage_01251.pdb 1 --SIVGRP-R--------H------------------DSY---VGDEAQSKR-GILTLK- 26 D vgDeaq tlK usage_00108.pdb 28 YPI 30 usage_00133.pdb 35 YPI 37 usage_00216.pdb 37 YPI 39 usage_00232.pdb 43 QL- 44 usage_00251.pdb 26 YPI 28 usage_00265.pdb 29 YPI 31 usage_00281.pdb 33 WPI 35 usage_00443.pdb 37 YPI 39 usage_00444.pdb 37 YPI 39 usage_00445.pdb 37 YPI 39 usage_00446.pdb 37 YPI 39 usage_00447.pdb 37 YPI 39 usage_00448.pdb 37 YPI 39 usage_00449.pdb 37 YPI 39 usage_00450.pdb 37 YPI 39 usage_00451.pdb 37 YPI 39 usage_00452.pdb 37 YPI 39 usage_00453.pdb 37 YPI 39 usage_00454.pdb 37 YPI 39 usage_00506.pdb 37 YPI 39 usage_00507.pdb 37 YPI 39 usage_00508.pdb 37 YPI 39 usage_00509.pdb 37 YPI 39 usage_00685.pdb 31 YPI 33 usage_00700.pdb 27 YPI 29 usage_00754.pdb 24 YPI 26 usage_00765.pdb 37 YPI 39 usage_00766.pdb 37 YPI 39 usage_00767.pdb 37 YPI 39 usage_00885.pdb 37 YPI 39 usage_01220.pdb 26 YPI 28 usage_01251.pdb 27 YPI 29 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################