################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:10 2021 # Report_file: c_0608_69.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00159.pdb # 2: usage_00507.pdb # 3: usage_00555.pdb # 4: usage_00556.pdb # # Length: 97 # Identity: 20/ 97 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 97 ( 56.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 97 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00159.pdb 1 --VIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYA 58 usage_00507.pdb 1 GLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCE-HGVDNDATLENLGKQAVVAA 59 usage_00555.pdb 1 GILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVKD-GIILNDETVEVLQKMAVSHA 59 usage_00556.pdb 1 GILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVKD-GIILNDETVEVLQKMAVSHA 59 q ir ik vPEl im Dv l T GH G d g i nd tve L k AV A usage_00159.pdb 59 KAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLS 95 usage_00507.pdb 60 AAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMS- 95 usage_00555.pdb 60 EAGADFVSPSDMMDGRIGAIREALDETDHSDVGILS- 95 usage_00556.pdb 60 EAGADFVSPSDMMDGRIGAIREALDETDHSDVGILS- 95 AGAdfv PSdmmDGri aIr aLd d i s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################