################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:53:37 2021 # Report_file: c_0209_7.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00060.pdb # 4: usage_00061.pdb # 5: usage_00073.pdb # 6: usage_00074.pdb # 7: usage_00148.pdb # 8: usage_00159.pdb # 9: usage_00160.pdb # 10: usage_00161.pdb # 11: usage_00191.pdb # 12: usage_00196.pdb # 13: usage_00205.pdb # 14: usage_00206.pdb # 15: usage_00207.pdb # 16: usage_00219.pdb # 17: usage_00232.pdb # 18: usage_00247.pdb # 19: usage_00267.pdb # 20: usage_00290.pdb # 21: usage_00303.pdb # 22: usage_00304.pdb # 23: usage_00318.pdb # 24: usage_00335.pdb # 25: usage_00343.pdb # 26: usage_00346.pdb # 27: usage_00359.pdb # 28: usage_00373.pdb # 29: usage_00379.pdb # 30: usage_00391.pdb # 31: usage_00392.pdb # 32: usage_00393.pdb # 33: usage_00412.pdb # 34: usage_00415.pdb # 35: usage_00420.pdb # 36: usage_00424.pdb # # Length: 120 # Identity: 16/120 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/120 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/120 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 EVVLTQSPGTLSLSPGERATLSCRASQSI---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00034.pdb 1 EVVLTQSPGTLSLSPGERATLSCRASQSI---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00060.pdb 1 EIVLTQSPDTLSLSPGERATLSCRASQSV---H---SRYFAWYQHKPGQPPRLLIYGGST 54 usage_00061.pdb 1 EIVLTQSPDTLSLSPGERATLSCRASQSV---H---SRYFAWYQHKPGQPPRLLIYGGST 54 usage_00073.pdb 1 --VLTQSPGTLSLSPGETATLSCRTSQGI---L---SNQLAWHQQRRGQPPRLLIYGGSN 52 usage_00074.pdb 1 --VLTQSPGTLSLSPGETATLSCRTSQGI---L---SNQLAWHQQRRGQPPRLLIYGGSN 52 usage_00148.pdb 1 EIVLTQSPGTLSLSAGERATLSCRASQSV---S---SRYLAWYQQKPGQAPRLLIYGASS 54 usage_00159.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---T---SSQLAWYQQKPGQAPRLLISGASN 54 usage_00160.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---T---SSQLAWYQQKPGQAPRLLISGASN 54 usage_00161.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00191.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKGV---STSGYSYLHWYQQKPGQAPRLLIYLASY 57 usage_00196.pdb 1 EIVLTQSPGTQSLSPGERATLSCRASQSV---G---NNKLAWYQQRPGQAPRLLIYGASS 54 usage_00205.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00206.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00207.pdb 1 -NFMLTQPHSVSESPGKTVTISCTRSSGSIASN-----YVQWYQQRPGSSPTTVIYEDNQ 54 usage_00219.pdb 1 --VLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 52 usage_00232.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00247.pdb 1 EIVLTQSPATLSLSPGERATLSCRASKGV---STSGYSYLHWYQQKPGQAPRLLIYLASY 57 usage_00267.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSV---H---PKYFAWYQQKPGQSPRLLIYSGST 54 usage_00290.pdb 1 --VLTQSPGTLSLSPGETAIISCRTSQYG---------SLAWYQQRPGQAPRLVIYSGST 49 usage_00303.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQGL---N-----FVVWYQQKGGQAPRLLIHGPTD 51 usage_00304.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQGL---N-----FVVWYQQKGGQAPRLLIHGPTD 51 usage_00318.pdb 1 --VLTQSPATLSLSPGERATLSCRASQSV---S---SNYLAWYQQKPGQAPRLLIYDSSS 52 usage_00335.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---F---STFLAWYQQKPGQAPRLLIYAASR 54 usage_00343.pdb 1 EIVMMQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00346.pdb 1 --VLTQSPGTLSLSPGERATLSCRASQSV---A---SSYLAWYQQKPGQAPRLLIYGASS 52 usage_00359.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSV---S---S-YLAWYQQKPGQAPRLLIYDASN 53 usage_00373.pdb 1 --GVTQSPAILSVSLGERVTLSCKTSQAI---T---PRHLVWHRQKGGQAPSLVMTGTSE 52 usage_00379.pdb 1 EIVLTQSPATLSVSPGERATLSCRASQNV---H---PRYFAWYQQKRGQSPRLLIHSGST 54 usage_00391.pdb 1 --VLTQSPGTLSLSPGETASLSCTAASYG---------HMTWYQKKPGQPPKLLIFATSK 49 usage_00392.pdb 1 --VLTQSPGTLSLSPGETASLSCTAASYG---------HMTWYQKKPGQPPKLLIFATSK 49 usage_00393.pdb 1 --VLTQSPGTLSLSPGETASLSCTAASYG---------HMTWYQKKPGQPPKLLIFATSK 49 usage_00412.pdb 1 --VLTQSPGTLSLSPGERATLSCRASETV---S---NDKVAWYQQKPGQAPRLLIYGASS 52 usage_00415.pdb 1 --VLTQSPATLSLSPGERATLSCRASQGL---N-----FVVWYQQKRGQAPRLLIHAPSG 50 usage_00420.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQSV---S---SSYLAWYQQKPGQAPRLLIYGASS 54 usage_00424.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQSV---S---S-YLAWYQQKPGQAPRLLIYDASN 53 qsP S S Ge SC W q Gq P l i usage_00033.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQY-----ETFGQGTKVEI---- 103 usage_00034.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQY-----ETFGQGTKVEI---- 103 usage_00060.pdb 55 RATGIPNRFSAGGS--GTQFTLTVNRLEAEDFAVYYCQQYG-RSPYTFGQGTKVEI---- 107 usage_00061.pdb 55 RATGIPNRFSAGGS--GTQFTLTVNRLEAEDFAVYYCQQYG-RSPYTFGQGTKVEI---- 107 usage_00073.pdb 53 RAPGIPERFTGSGS--GTDFVLTIKRLERDDFAVYYCQIL-----EFFGRGTRVEM---- 101 usage_00074.pdb 53 RAPGIPERFTGSGS--GTDFVLTIKRLERDDFAVYYCQIL-----EFFGRGTRVEM---- 101 usage_00148.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRVEPEDFAVYYCQQYD-NSVCTFGQGTKLEIKRT- 110 usage_00159.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPTFGGGTKVEI----- 106 usage_00160.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPTFGGGTKVEI----- 106 usage_00161.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPSTFGQGTKVEIKRLV 111 usage_00191.pdb 58 LESGVPARFSGSGS--GTDFTLTISSLEPEDFAVYYCQHSR-DLPLTFGGGTKVEI---- 110 usage_00196.pdb 55 RPSGVADRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-QSLSTFGQGTKVEV---- 107 usage_00205.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSTWTFGQGTKVEI---- 107 usage_00206.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSTWTFGQGTKVEI---- 107 usage_00207.pdb 55 RPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVFGGGTKLTV---- 110 usage_00219.pdb 53 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPSTFGQGTKVEI---- 105 usage_00232.pdb 55 RATGIPDRFSGSGS--GTDFTLSISRLEPEDFAVYYCLHYG-TSPMYTFGQGTKLEI--- 108 usage_00247.pdb 58 LESGVPARFSGSGS--GTDFTLTISSLEPEDFAVYYCQHSR-DLPLTFGGGTKVEI---- 110 usage_00267.pdb 55 RAAGIADRFSGGGS--GIHFTLTITRVEPEDFAVYFCQQYG-GSPYTFGQGTKVEL---- 107 usage_00290.pdb 50 RAAGIPDRFSGSRW--GPDYNLTISNLESGDFGVYYCQQY-----EFFGQGTKVQV---- 98 usage_00303.pdb 52 RAPGVPDRFSARGS--GTEFSLVISSVEPDDFALYYCQEYS-STPYNFGPGTRVER---- 104 usage_00304.pdb 52 RAPGVPDRFSARGS--GTEFSLVISSVEPDDFALYYCQEYS-STPYNFGPGTRVER---- 104 usage_00318.pdb 53 RATGVPARFSGSGS--GTDFTLTISSLEPEDFAVYYCHQYS-DISPTFGQGTKVEI---- 105 usage_00335.pdb 55 RAAGIPDRFSGSES--GTDFTLTISRLEPEDFAVYYCQQSE-SSPWTFGQGTKVDI---- 107 usage_00343.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPETFGQGTKVEI---- 107 usage_00346.pdb 53 RATGVPDRFSGSGS--GTDFILTISRLEPEDFAVYYCQQYD-GSQYTFGQGTKLEI---- 105 usage_00359.pdb 54 RATGIPARFSGSGS--GTDFTLTISSLEPEDFAVYYCQQY-----EFFGQGTKLEI---- 102 usage_00373.pdb 53 RASGIPDRFIGSGS--GTDFTLTITRLEAEDFAVYYCQCL-----EAFGQGTKLEI---- 101 usage_00379.pdb 55 RAAGIADRFSGGGS--GMHFTLTITRVEPEDFAVYFCQQYG-GSPYTFGQGTRVEL---- 107 usage_00391.pdb 50 RASGIPDRFSGSQF--GKQYTLTITRMEPEDFARYYCQQL-----EFFGQGTRLEI---- 98 usage_00392.pdb 50 RASGIPDRFSGSQF--GKQYTLTITRMEPEDFARYYCQQL-----EFFGQGTRLEI---- 98 usage_00393.pdb 50 RASGIPDRFSGSQF--GKQYTLTITRMEPEDFARYYCQQL-----EFFGQGTRLEI---- 98 usage_00412.pdb 53 RATGIPDRFSGSGS--GTDFTLSISGLEPEDFVVYYCQQYA-SSPRTFGQGTKVEI---- 105 usage_00415.pdb 51 RAPGVPDRFSARGS--GTEFSLVISSVEPDDFAIYYCQEYS-STPYNFGPGTRVDR---- 103 usage_00420.pdb 55 RATGIPDRFSGSGS--GTDFTLTISRLEPEDFAVYYCQQYG-SSPLTFGQGTKVEI---- 107 usage_00424.pdb 54 RATGIPARFSGSGS--GTDFTLTISSLEPEDFAVYYCQQY-----EFFGQGTKLEI---- 102 G RF g L e Df Y C g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################