################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:35 2021 # Report_file: c_0189_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00458.pdb # 2: usage_00716.pdb # 3: usage_00723.pdb # 4: usage_00733.pdb # 5: usage_00738.pdb # 6: usage_00760.pdb # # Length: 236 # Identity: 53/236 ( 22.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/236 ( 44.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/236 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00458.pdb 1 ----LHEEIALHKHL-KHKNIVQYLGSFSEN------GFIKIFMEQVPGGSLSALLRSK- 48 usage_00716.pdb 1 -LQEIIKEISIMQQC-DSPYVVKYYGSYFKN------TDLWIVMEYCGAGSVSDIIRLRN 52 usage_00723.pdb 1 --EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 58 usage_00733.pdb 1 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 60 usage_00738.pdb 1 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 60 usage_00760.pdb 1 ------LEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTK 54 EI k h ni YyG f k lw vME cgaGS dl usage_00458.pdb 49 -WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG---T 104 usage_00716.pdb 53 -KT---LIEDEIATILKSTLKGLEYLHFMRKIHRNIKAGNILLN-TEGHAKLADFG---- 103 usage_00723.pdb 59 GNT---LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFG---V 111 usage_00733.pdb 61 GNT---LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVNT- 115 usage_00738.pdb 61 GNT---LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVNT- 115 usage_00760.pdb 55 GNT---LKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLT-ENAEVKLVDFGVNT- 109 t l E Ia i iL GL LH iHRdIKg NvLl Kl DFG usage_00458.pdb 105 SKRLAF---------TGTLQYMAPEIID---KGPRGYGKAADIWSLGCTIIEMATGKPPF 152 usage_00716.pdb 104 ------VAGQLTDTVIGTPFWMAPEVIQ---EI--GYNCVADIWSLGITSIEMAEGKPPY 152 usage_00723.pdb 112 SA-------------IGTPYWMAPEVIA---------DFKSDLWSLGITAIEMAEGAPPL 149 usage_00733.pdb 116 -----F---------IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 161 usage_00738.pdb 116 -----F---------IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 161 usage_00760.pdb 110 -----F---------IGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPL 155 iGTp wMAPEvI D WSlGiT IEMAeG PP usage_00458.pdb 153 YELGEPQAAMFKVGMFKVHPE-IPE-SMSAEAKAFILKCFEPDPDKRACANDLLVD 206 usage_00716.pdb 153 ADIH-PMRAIFMIPTNP-PPTFRKPELWSDDFTDFVKKCLVKNPEQRATATQLLQH 206 usage_00723.pdb 150 CDMH-PMRALFLIPRNP-APRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKH 202 usage_00733.pdb 162 CDMH-PMRALFLIPRNP-APRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKH 214 usage_00738.pdb 162 CDMH-PMRALFLIPRNP-APRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKH 214 usage_00760.pdb 156 CDMH-PMRALFLIPRNP-PPRLKSK-KWSKKFFSFIEGCLVKNYMQRPSTEQLLKH 208 d h PmrA F ip np P wS f Fi Clvkn qR qL h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################