################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:02 2021 # Report_file: c_1377_125.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00230.pdb # 2: usage_00259.pdb # 3: usage_00403.pdb # 4: usage_00852.pdb # 5: usage_00854.pdb # 6: usage_01513.pdb # # Length: 35 # Identity: 0/ 35 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 35 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 35 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00230.pdb 1 --TVEDLLSLRQVVSG---NPEALAPLLENISARY 30 usage_00259.pdb 1 -HQEKLLKLIELGMEGKVIKTQNLAALLHAIARRP 34 usage_00403.pdb 1 YAEVLLGYLECLVEDNQTITQGILDETINAVRGR- 34 usage_00852.pdb 1 -HQEKLLKLIELGMEGKVIKTQNLAALLHAIARRP 34 usage_00854.pdb 1 -HQEKLLKLIELGMEGKVIKTQNLAALLHAIARRP 34 usage_01513.pdb 1 ---RQWLIDTLYAFNS--GNVERFQTLKTAWGQQP 30 l l l a r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################