################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:35 2021 # Report_file: c_0935_151.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_01272.pdb # 2: usage_01282.pdb # 3: usage_01401.pdb # # Length: 65 # Identity: 2/ 65 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 65 ( 44.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 65 ( 55.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01272.pdb 1 -----ADLVYTGR--FDL-NPARNTREKLLLPLSDIKPLQQAG-VYVAV-N----SNAAT 46 usage_01282.pdb 1 -----ADLVYTGR--FDL-NPARNTREKLLLPLSDIKPLQQAG-VYVAV-MN---SNAAT 47 usage_01401.pdb 1 TALGK-SSRISLDGRRSER-SVI-------LAD---------GSHSLTLL-HPGV--YTL 39 dlvytgr fdl par Lpl G vyvav aat usage_01272.pdb 47 LFTLS 51 usage_01282.pdb 48 LFTLS 52 usage_01401.pdb 40 SSEV- 43 lftl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################