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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:28:04 2021
# Report_file: c_0406_22.html
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#====================================
# Aligned_structures: 6
#   1: usage_00087.pdb
#   2: usage_00089.pdb
#   3: usage_00105.pdb
#   4: usage_00257.pdb
#   5: usage_00258.pdb
#   6: usage_00409.pdb
#
# Length:         92
# Identity:       83/ 92 ( 90.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     83/ 92 ( 90.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            9/ 92 (  9.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00087.pdb         1  TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   60
usage_00089.pdb         1  TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   60
usage_00105.pdb         1  -TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   59
usage_00257.pdb         1  -TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   59
usage_00258.pdb         1  -TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   59
usage_00409.pdb         1  -TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT   59
                            TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT

usage_00087.pdb        61  RLKGTEGGTYTFLVSNSDVNAAIA--------   84
usage_00089.pdb        61  RLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK   92
usage_00105.pdb        60  RLKGTEGGTYTFLVSNSDVNAAIAFNVYVN--   89
usage_00257.pdb        60  RLKGTEGGTYTFLVSNSDVNAAIAFN------   85
usage_00258.pdb        60  RLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK   91
usage_00409.pdb        60  RLKGTEGGTYTFLVSNSDVNAAIAFNVYVN--   89
                           RLKGTEGGTYTFLVSNSDVNAAIA        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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