################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:00 2021 # Report_file: c_1389_61.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00052.pdb # 2: usage_00133.pdb # 3: usage_00294.pdb # # Length: 88 # Identity: 21/ 88 ( 23.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 88 ( 68.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 88 ( 3.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 GQAAVQAVTAQFYANIQADATVATFFNGIDMPNQTNKTAAFLCAALGGPNAWTGRNLKEV 60 usage_00133.pdb 1 -REAVEAAVDKFYNKIVADPTVSTYFSNTDMKVQRSKQFAFLAYALGGASEWKGKDMRTA 59 usage_00294.pdb 1 -ENAMKAAVPLFFKKVLADERVKHFFKNTDMDHQTKQQTDFLTMLLGGPNHYKGKNMTEA 59 Av Aav Fy ki AD tV tfF ntDM Qt kq aFL aLGGpn wkGknm ea usage_00052.pdb 61 HANM--GVSNAQFTTVIGHLRSALTGAG 86 usage_00133.pdb 60 HKDLVPHLSDVHFQAVARHLSDTLTELG 87 usage_00294.pdb 60 HKGM--NLQNLHFDAIIENLAATLKELG 85 Hk m lsn hF avi hL tLtelG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################