################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:14 2021 # Report_file: c_1291_128.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00023.pdb # 2: usage_00162.pdb # 3: usage_00163.pdb # 4: usage_00791.pdb # 5: usage_01070.pdb # 6: usage_01215.pdb # 7: usage_01329.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 59 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 59 ( 67.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ---------NPRDLPLMALPPC----------HALCQF-YVVNSE--LSCQL----YQR 33 usage_00162.pdb 1 ------FTNPNNLSIATGSPP-AVHGIC---GNYLYEP-S---T---GEEVM----MN- 37 usage_00163.pdb 1 ------FTNPNNLSIATGSPP-AVHGIC---GNYLYEP-S---T---GEEVM----MN- 37 usage_00791.pdb 1 EDQAWLRLCARQGWDAYACG------------FYYLLDPV--SG---ERGEA----G-- 36 usage_01070.pdb 1 ------DHWADMEKAG----------KRPPSPALWWVN-G--KG---KELMW----N-- 31 usage_01215.pdb 1 -------TCPGHSTILTGSRP-SRTGII---ANNWFDL-D---A-KREDKN-LYC---- 38 usage_01329.pdb 1 --------AIGHTSIFTGSVP-SIHGIA---GNDWYDK-E---L---GKSV----YC-- 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################