################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:23 2021 # Report_file: c_1486_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00096.pdb # 2: usage_00097.pdb # 3: usage_00695.pdb # 4: usage_01175.pdb # 5: usage_02159.pdb # 6: usage_02237.pdb # # Length: 51 # Identity: 6/ 51 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 51 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 51 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 --SQSNRELVVDFLSYKLSQKG--YSWSQMAAVKQALREAGDEFELRYRRA 47 usage_00097.pdb 1 -----NRELVVDFLSYKLSQKG--YSWSQMAAVKQALREAGDEFELRYRRA 44 usage_00695.pdb 1 SMSQSNRELVVDFLSYKLSQKG--YSWSQMAAVKQALREAGDEFELRYR-- 47 usage_01175.pdb 1 -MSQSNRELVVDFLSYKLSQKG--YSWSQMAAVKQALREAGDEFELRYRRA 48 usage_02159.pdb 1 ---QSNRELVVDFLSYKLSQKG--YSWSQMAAVKQALREAGDEFELRYRR- 45 usage_02237.pdb 1 ------SNRELVVDFLSYKLSQKGYSWS-AVKQALREAGDEFELRYRRA-- 42 relvvdflsyklsqkg YSWS maavkqalreagdEfelRyr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################