################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:29 2021 # Report_file: c_0081_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00021.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00049.pdb # 7: usage_00059.pdb # # Length: 216 # Identity: 53/216 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/216 ( 40.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/216 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 ---------AAFIETNIVGTYALLEVARKY-WSALGEDKKNNFRFHHISTDEVYGDLPHP 50 usage_00037.pdb 1 HNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D----------IRFHHVSTDEVYGDLPLR 49 usage_00038.pdb 1 HNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D----------IRFHHVSTDEVYGDLPLR 49 usage_00039.pdb 1 HNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D----------IRFHHVSTDEVYGDLPLR 49 usage_00040.pdb 1 HNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D----------IRFHHVSTDEVYGDLPLR 49 usage_00049.pdb 1 ------------YDTNVIGTVTLLELVKKY-P---------HIKLVQVSTDEVYGSLGK- 37 usage_00059.pdb 1 HVDRSISSPEIFLHSNVIGTYTLLESIRRENP---------EVRFVHVSTDEVYGDILK- 50 tN iGTytLLE rky rf hvSTDEVYGdl usage_00021.pdb 51 DEVE--NSVT-LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP 107 usage_00037.pdb 50 EDLPGHGEGPG-EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP 108 usage_00038.pdb 50 EDLPGHGEGPG-EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP 108 usage_00039.pdb 50 EDLPGHGEGPG-EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP 108 usage_00040.pdb 50 EDLPGHGEGPG-EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP 108 usage_00049.pdb 38 -----------TGRFTEETPLAPNSPYSSSKASAD-IALAYYKTYQLPVIVTRCSNNYGP 85 usage_00059.pdb 51 ------------GSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGP 98 FT t PsSPYS KA sD v aw r CsNNYGP usage_00021.pdb 108 YHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGG 167 usage_00037.pdb 109 YQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 168 usage_00038.pdb 109 YQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 168 usage_00039.pdb 109 YQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 168 usage_00040.pdb 109 YQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 168 usage_00049.pdb 86 YQYPEKLIPL-VTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGG 144 usage_00059.pdb 99 YQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIYNISA 158 Yq EK IP i n l G k YG G nvRDW DH l kG gE Y Ig usage_00021.pdb 168 HNEKKNLDVVFTICDLLDEIVPKATS-YREQITYVA 202 usage_00037.pdb 169 DGEKNNKEVLELILEKMG--------QPKDAYDHVT 196 usage_00038.pdb 169 DGEKNNKEVLELILEKMG--------QPKDAYDHVT 196 usage_00039.pdb 169 DGEKNNKEVLELILEKMG--------QPKDAYDHVT 196 usage_00040.pdb 169 DGEKNNKEVLELILEKMG--------QPKDAYDHVT 196 usage_00049.pdb 145 NNEKTNVEVVEQIITLLG--------KTKKDIEYVT 172 usage_00059.pdb 159 GEEKTNLEVVKIILRLMG--------KGEELIELVE 186 EK N eV I g V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################