################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:45 2021 # Report_file: c_0777_130.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00137.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00641.pdb # 5: usage_00866.pdb # 6: usage_00890.pdb # 7: usage_00999.pdb # 8: usage_01011.pdb # 9: usage_01035.pdb # 10: usage_01126.pdb # 11: usage_01276.pdb # 12: usage_01288.pdb # 13: usage_01471.pdb # 14: usage_01472.pdb # 15: usage_01473.pdb # 16: usage_01522.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 62 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00137.pdb 1 -QKLYMRFNVIR-YLPPHVFQNVPLLTVLMLDR-NDLSSL-P-PGIFHNTPKLTMMSM-- 53 usage_00345.pdb 1 -RVLYLNSNQIT-KLEPGVFDRLANLRELHLWG-NQLVSL-P-PGVFDNLANLEKLWL-- 53 usage_00346.pdb 1 -RVLYLNSNQIT-KLEPGVFDRLANLRELHLWG-NQLVSL-P-PGVFDNLANLEKLWL-- 53 usage_00641.pdb 1 SFTLDLSRNNLV-TVQPEMFAQLSRLQCLRLSH-NSISQAVN-GSQFVPLTSLQVLDL-- 55 usage_00866.pdb 1 -EHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLG-NPYKTL-GETSLFSHLTKLQILRVGN 56 usage_00890.pdb 1 -TKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHE-NKLQSL-P-NGVFDKLTQLKELAL-- 53 usage_00999.pdb 1 -NELRLDFNKLK-SLPPRVFDRLTNLTALYLEY-NQLQSI-P-KGVFDKLVNLETLWL-- 53 usage_01011.pdb 1 -KVLNLQHNELS-QLSDKTFAFCTNLTELHLMS-NSIQKI-K-NNPFVKQKNLITLDL-- 53 usage_01035.pdb 1 -GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG-NQLKSL-P-SGVFDRLTKLKELRL-- 53 usage_01126.pdb 1 -TTLNLSSNGFD-EIPREVFKDLTSLTTLNLSN-NQLTSL-P-QGVFERLTNLKTLNL-- 53 usage_01276.pdb 1 -TELDLARNQLQ-SLPKGVFDKLTQLKDLRLYQ-NQLKSV-P-DGVFDRLTSLQYIWL-- 53 usage_01288.pdb 1 -QWLDLSRCEIE-TIEDKAWHGLHHLSNLILTG-NPIQSF-S-PGSFSGLTSLENLVA-- 53 usage_01471.pdb 1 -TTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRL-THI-P-ANLLTDMRNLSHLELR- 55 usage_01472.pdb 1 -TFLDLSTNQLQ-SLPNGVFDKLTNLRELHLEH-NQLQSL-P-NGVFDKLTSLTTLFL-- 53 usage_01473.pdb 1 -LGLSLRHNQLQ-SLPNGVFDKLTQLTWLHLDH-NQLQSL-P-NGVFDKLTKLTELIL-- 53 usage_01522.pdb 1 -ESIEFGSNKLR-QMPRGIFGKMPKLKQLNLAS-NQLKSV-P-DGIFDRLTSLQKIWL-- 53 l L l l n f L usage_00137.pdb -- usage_00345.pdb -- usage_00346.pdb -- usage_00641.pdb -- usage_00866.pdb 57 MD 58 usage_00890.pdb -- usage_00999.pdb -- usage_01011.pdb -- usage_01035.pdb -- usage_01126.pdb -- usage_01276.pdb -- usage_01288.pdb -- usage_01471.pdb -- usage_01472.pdb -- usage_01473.pdb -- usage_01522.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################