################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:10 2021 # Report_file: c_0173_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00123.pdb # 2: usage_00124.pdb # 3: usage_00346.pdb # 4: usage_00347.pdb # 5: usage_00348.pdb # 6: usage_00349.pdb # 7: usage_00350.pdb # # Length: 199 # Identity: 87/199 ( 43.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/199 ( 43.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/199 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 -VVLVTGAGGGLGRAYALAFAERGALVVVNDLGG------------SSAADKVVEEIRRR 47 usage_00124.pdb 1 -VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDF-KGVG----KSSAADKVVEEIRRR 54 usage_00346.pdb 1 -VVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG--SAAQSVVDEITAA 56 usage_00347.pdb 1 -VVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG--SAAQSVVDEITAA 56 usage_00348.pdb 1 -VVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG--SAAQSVVDEITAA 56 usage_00349.pdb 1 -VVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG--SAAQSVVDEITAA 56 usage_00350.pdb 1 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG-VGLDGSPASGG--SAAQSVVDEITAA 57 VV VTGAGGG GRA ALAFA GA VVVND G SAA VV EI usage_00123.pdb 48 GGKAVANYDSV-E--AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 104 usage_00124.pdb 55 GGKAVANYDSV-E--AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 111 usage_00346.pdb 57 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 116 usage_00347.pdb 57 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 116 usage_00348.pdb 57 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 116 usage_00349.pdb 57 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 116 usage_00350.pdb 58 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 117 GG AVA V L TA TFG DV VNNAGI RDR S E D V usage_00123.pdb 105 HLRGSFQVTRAAWDHK----KQN---YGRI-ITASASGIYGNFGQANYSAAKLGLLGLAN 156 usage_00124.pdb 112 HLRGSFQVTRAAWDHK----KQN---YGRI-ITASASGIYGNFGQANYSAAKLGLLGLAN 163 usage_00346.pdb 117 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 176 usage_00347.pdb 117 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 176 usage_00348.pdb 117 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 176 usage_00349.pdb 117 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 176 usage_00350.pdb 118 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 177 HL G F R A K GRI T S G G GQ NYSAAK G L usage_00123.pdb 157 TLVIEGRKNNIHCNTIA-- 173 usage_00124.pdb 164 TLVIEGRKNNIHCNTIA-- 180 usage_00346.pdb 177 VGAAEMGRYGVTVNAIAPS 195 usage_00347.pdb 177 VGAAEMGRYGVTVNAIAPS 195 usage_00348.pdb 177 VGAAEMGRYGVTVNAIAPS 195 usage_00349.pdb 177 VGAAEMGRYGVTVNAIAPS 195 usage_00350.pdb 178 VGAAEMGRYGVTVNAIAPS 196 E N IA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################