################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:22 2021 # Report_file: c_1484_85.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00148.pdb # 2: usage_02062.pdb # 3: usage_02245.pdb # 4: usage_02246.pdb # 5: usage_02247.pdb # 6: usage_02267.pdb # 7: usage_04371.pdb # 8: usage_04560.pdb # 9: usage_04561.pdb # 10: usage_04562.pdb # 11: usage_04563.pdb # # Length: 92 # Identity: 0/ 92 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 92 ( 5.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 92 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00148.pdb 1 -LRRVWGQIWQTIRALKEDCARLLQGQRTSMVNLLRYNTELSKKKNS---MT-SER---- 51 usage_02062.pdb 1 ---DEIGILAKSIERLRRSLKQLADDGTLLMAGVSHDLRTPLTRIRLATEMM-S--E--- 51 usage_02245.pdb 1 --IGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 49 usage_02246.pdb 1 -EIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 usage_02247.pdb 1 -EIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 usage_02267.pdb 1 DEIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 51 usage_04371.pdb 1 -DRTLLMAGVSHDLR------------------TPLTRIRAYAETIY---NSLG---ELD 35 usage_04560.pdb 1 -EIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 usage_04561.pdb 1 -EIGILAKSIERLRRSLKQQADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 usage_04562.pdb 1 -EIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 usage_04563.pdb 1 -EIGILAKSIERLRRSLKQLADDRTLLMAGVSHDLRTPLTRIRLATE---MM-S--E--- 50 r m s usage_00148.pdb 52 -----EVQALVDKMMALQTDSVDLQR------ 72 usage_02062.pdb 52 -QDGYLAESINKDIEECNAIIEQFID------ 76 usage_02245.pdb 50 -QDGYLAESINKDIEECNAIIEQFIDYL---- 76 usage_02246.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDYLR--- 78 usage_02247.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDYLR--- 78 usage_02267.pdb 52 -QDGYLAESINKDIEECNAIIEQFID------ 76 usage_04371.pdb 36 LSTLKELAESINKDIEECNAIIEQFIDYLRTG 67 usage_04560.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDYLR--- 78 usage_04561.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDY----- 76 usage_04562.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDYL---- 77 usage_04563.pdb 51 -QDGYLAESINKDIEECNAIIEQFIDYL---- 77 e i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################