################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:46 2021 # Report_file: c_0095_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00017.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00032.pdb # 6: usage_00050.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00056.pdb # 12: usage_00057.pdb # # Length: 190 # Identity: 37/190 ( 19.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/190 ( 37.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/190 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -YIVERPNAQNGICYPGVLNELEELKAFIGSGERVERFEMF-PKSTWAGVDTSRGVTNAC 58 usage_00020.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKEAMGF---TYSGI-RTNGATSAC 55 usage_00021.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKEAMGF---TYSGI-RTNGATSAC 55 usage_00022.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKEAMGF---TYSGI-RTNGATSAC 55 usage_00032.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKEAMGF---TYSGI-RTNGATSAC 55 usage_00050.pdb 1 DLIIERREG-TDICYPGRFTNEESLRQILRRSGGIGKESMGF---TYSGI-RTNGATSAC 55 usage_00051.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKEAMGF---TYSGI-RTNGATSAC 55 usage_00052.pdb 1 -YIVEKINPANDLCYPGNFNDYEELKHLLSRINHFEKIQII-PKSSWSDH-EASGVSSAC 57 usage_00054.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKETMGF---TYSGI-RTNGTTSAC 55 usage_00055.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKETMGF---TYSGI-RTNGTTSAC 55 usage_00056.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKETMGF---TYSGI-RTNGTTSAC 55 usage_00057.pdb 1 DLIIERREG-SDVCYPGKFVNEEALRQILRESGGIDKETMGF---TYSGI-RTNGTTSAC 55 I Er d CYPG f E L l k m t sg G tsAC usage_00017.pdb 59 PSYTL-DSSFYRNLVWLVKTD-SATYPVIKGTYNNTGTQPILYFWGVHHPPDTTVQDNLY 116 usage_00020.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLY 112 usage_00021.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLY 112 usage_00022.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLY 112 usage_00032.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLY 112 usage_00050.pdb 56 TR--S-GSSFYAEMKWLLSNSDNAAFPQMTKAYRNPRNKPALIIWGVHHSESVSEQTKLY 112 usage_00051.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLY 112 usage_00052.pdb 58 PY--QGRSSFFRNVVWLTKKD--NAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTRLY 113 usage_00054.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKDPALIIWGIHHSGSTTEQTKLY 112 usage_00055.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKDPALIIWGIHHSGSTTEQTKLY 112 usage_00056.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKDPALIIWGIHHSGSTTEQTKLY 112 usage_00057.pdb 56 RR--S-GSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKDPALIIWGIHHSGSTTEQTKLY 112 SSFy WL aa P Y Nt p L WG HH eQt LY usage_00017.pdb 117 GSGDKYVRMGTESMNFAKSPEIAARPAVNGQRSRIDYYWSVLRPGETLNVESNGNLIAPW 176 usage_00020.pdb 113 GSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPD 172 usage_00021.pdb 113 GSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPD 172 usage_00022.pdb 113 GSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPD 172 usage_00032.pdb 113 GSGNKLVTVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLMLNPNDTVTFSFNGAFIAPD 172 usage_00050.pdb 113 GSGNKLITVRSSKYQQSFTPNPG--------ARRIDFHWLLLDPNDTVTFTFNGAFIAPD 164 usage_00051.pdb 113 GSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPD 172 usage_00052.pdb 114 QNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPE 173 usage_00054.pdb 113 GSGNKLITVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLILNPNDTVTFSFNGAFIAPD 172 usage_00055.pdb 113 GSGNKLITVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLILNPNDTVTFSFNGAFIAPD 172 usage_00056.pdb 113 GSGNKLITVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLILNPNDTVTFSFNGAFIAPD 172 usage_00057.pdb 113 GSGNKLITVGSSNYQQSFVPSPGARPQVNGQSGRIDFHWLILNPNDTVTFSFNGAFIAPD 172 gsg k vg s q P Ridf W L Pndt f NG fIAP usage_00017.pdb 177 YAYKFVSTNK 186 usage_00020.pdb 173 R--------- 173 usage_00021.pdb 173 R--------- 173 usage_00022.pdb 173 R--------- 173 usage_00032.pdb ---------- usage_00050.pdb 165 R--------- 165 usage_00051.pdb ---------- usage_00052.pdb ---------- usage_00054.pdb 173 R--------- 173 usage_00055.pdb 173 R--------- 173 usage_00056.pdb 173 R--------- 173 usage_00057.pdb 173 R--------- 173 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################