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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:46:02 2021
# Report_file: c_0048_3.html
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#====================================
# Aligned_structures: 8
#   1: usage_00022.pdb
#   2: usage_00038.pdb
#   3: usage_00051.pdb
#   4: usage_00087.pdb
#   5: usage_00088.pdb
#   6: usage_00089.pdb
#   7: usage_00123.pdb
#   8: usage_00125.pdb
#
# Length:        275
# Identity:       14/275 (  5.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/275 ( 12.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           90/275 ( 32.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00022.pdb         1  RAAVVTGGASGIGLATATEFARR--G-ARLVLSDV-DQPALEQAVNGLRGQGF---DAHG   53
usage_00038.pdb         1  -VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR-DLKTQGRLWEAARALACPPGSLET   58
usage_00051.pdb         1  KVAIITGSSNGIGRATAVLFARE--G-AKVTITGR-HAERLEETRQQILAAGVSEQNVNS   56
usage_00087.pdb         1  KVALVTASTDGIGLAIARRLAQD--G-AHVVVSSR-KQENVDRTVATLQGEGL---SVTG   53
usage_00088.pdb         1  KVALVTASTDGIGLAIARRLAQD--G-AHVVVSSR-KQENVDRTVATLQGEGL---SVTG   53
usage_00089.pdb         1  KVALVTASTDGIGLAIARRLAQD--G-AHVVVSSR-KQENVDRTVATLQGEGL---SVTG   53
usage_00123.pdb         1  KVALVTASTDGIGFAIARRLAQD--G-AHVVVSSR-KQQNVDQAVATLQGEGL---SVTG   53
usage_00125.pdb         1  KCALVTGSSRGVGKAAAIRLAEN--G-YNIVINYARSKKAALETAEEIEKLGV---KVLV   54
                             a  T    GiG a A   A    g                         g        

usage_00022.pdb        54  VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGI--V-VAGPLAQM-NHDDWR--WVIDI  107
usage_00038.pdb        59  LQLDVRDSKSVAAARERV--TEGRVDVLVCNAGL--G-LLGPLEAL-GEDAVA--SVLDV  110
usage_00051.pdb        57  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAG------------Q-SIESYD--ATLNL  101
usage_00087.pdb        54  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDA-TEEVWD--KILHV  108
usage_00088.pdb        54  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDA-TEEVWD--KILHV  108
usage_00089.pdb        54  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDA-TEEVWD--KILHV  108
usage_00123.pdb        54  TVCHVGKAEDRERLVATAVKLHGGIDILVSNAAV--NPFFGSIMDV-TEEVWD--KTLDI  108
usage_00125.pdb        55  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNA-ASGV--LRP---VMELEETHWDWTMNI  108
                               V                 G  D  v NA                            

usage_00022.pdb       108  DLWGSIHAVEAFLPRLLEQGTGGHIAFTAS-FA-GLVPNAGLGTYG-----VAKYGVVGL  160
usage_00038.pdb       111  NVVGTVRMLQAFLPDMKRRG-SGRVLVTGS-VG-GLMGLPFNDVYC-----ASKFALEGL  162
usage_00051.pdb       102  NLRSVIALTKKAVPHLSST--KGEIVNISS-IASGLHATPDFPYYS-----IAKAAIDQY  153
usage_00087.pdb       109  NVKATVLMTKAVVPEMEKRG-GGSVLIVSS-VG-AYHPFPNLGPYN-----VSKTALLGL  160
usage_00088.pdb       109  NVKATVLMTKAVVPEMEKRG-GGSVLIVSS-VG-AYHPFPNLGPYN-----VSKTALLGL  160
usage_00089.pdb       109  NVKATVLMTKAVVPEMEKRG-GGSVLIVSS-VG-AYHPFPNLGPYN-----VSKTALLGL  160
usage_00123.pdb       109  NVKAPALMTKAVVPEMEKRG-GGSVVIVSS-IA-AFSPSPGFSPYN-----VSKTALLGL  160
usage_00125.pdb       109  NAKALLFCAQEAAKLMEKNG-GGHIVSISSLG-----SIRYL-ENYTTVGV-SKAALEAL  160
                           n            p        G      S              y        K a   l

usage_00022.pdb       161  AETLAREVKPNGIGVSVLCPMV-VETKLVSNSER----I------R--------------  195
usage_00038.pdb       163  CESLAVLLLPFGVHLSLIECGP-VHT--EVLDRTDIHTFHRFYQYL-A-LSKQVFR----  213
usage_00051.pdb       154  TRNTAIDLIQHGIRVNSISPGL-VAT--------------------GFYSTMATMKECVP  192
usage_00087.pdb       161  TKNLAVELAPRNIRVNCLAPGL-IKTNFSQVLWM-----------D-K-ARKEYMKESLR  206
usage_00088.pdb       161  TKNLAVELAPRNIRVNCLAPGL-IKTNFSQVLWM-----------D-K-ARKEYMKESLR  206
usage_00089.pdb       161  TKNLAVELAPRNIRVNCLAPGL-IKTNFSQVLWM-----------D-K-ARKEYMKESLR  206
usage_00123.pdb       161  TKTLAIELAPRNIRVNCLAPGL-IKTSFSRMLWM-----------D-K-EKEESMKETLR  206
usage_00125.pdb       161  TRYLAVELSPKQIIVNAVSGGAI---FP-N---------------R-E-DLLEDARQNTP  199
                              lA  l p  i v     g                                       

usage_00022.pdb       196  ---SVSADDVARLTADAIL---A--NRLYILPH--  220
usage_00038.pdb       214  -EAAQNPEEVAEVFLTALR---APKPTLRYFTT--  242
usage_00051.pdb       193  AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLV-VD  226
usage_00087.pdb       207  IRRLGNPEDCAGIVSFLCSE-DASYITGETVV-VG  239
usage_00088.pdb       207  IRRLGNPEDCAGIVSFLCSE-DASYITGETVV-VG  239
usage_00089.pdb       207  IRRLGNPEDCAGIVSFLCSE-DASYITGETVV-VG  239
usage_00123.pdb       207  IRRLGEPEDCAGIVSFLCSE-DASYITGETVV-VG  239
usage_00125.pdb       200  AGRMVEIKDMVDTVEFLVSS-KADMIRGQTII-VD  232
                                   d a           a            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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