################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:13 2021 # Report_file: c_1168_45.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00009.pdb # 2: usage_00013.pdb # 3: usage_01438.pdb # 4: usage_01439.pdb # 5: usage_01442.pdb # 6: usage_01488.pdb # 7: usage_01490.pdb # 8: usage_01500.pdb # 9: usage_01501.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 34 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 34 ( 61.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -------GNKPILLGRTKEAFATPVDGIPHI-AF 26 usage_00013.pdb 1 MIM-PQSRLDVADNS------------GAREIM- 20 usage_01438.pdb 1 ----RQYLIMGKEALQIKY------NFSFRY-IY 23 usage_01439.pdb 1 ----RQYLIMGKEALQIKY------NFSFRY-IY 23 usage_01442.pdb 1 ----RQYLIMGKEALQIKY------NFSFRY-IY 23 usage_01488.pdb 1 -------LIMGKEALQIKY------NFSFRY-IY 20 usage_01490.pdb 1 ----RQYLIMGKEALQIKY------NFSFRY-IY 23 usage_01500.pdb 1 ---GRQYLIMGKEALQIKY------NFSFRY-IY 24 usage_01501.pdb 1 ---GRQYLIMGKEALQIKY------NFSFRY-IY 24 r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################