################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:31 2021 # Report_file: c_0028_6.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00093.pdb # 2: usage_00095.pdb # 3: usage_00105.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # 6: usage_00108.pdb # # Length: 221 # Identity: 50/221 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 173/221 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/221 ( 21.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 ---MVLQLP--------ERCYCADVIYPMAVVATAERGLIVYQLE---NQPS-EFRRIES 45 usage_00095.pdb 1 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE---DDNGTIEES 57 usage_00105.pdb 1 ---MVLQLP--------ERCYCADVIYPMAVVATAERGLIVYQLE---NQPS-EFRRIES 45 usage_00106.pdb 1 ---MVLQLP--------ERCYCADVIYPMAVVATAERGLIVYQLE---NQPS-EFRRIES 45 usage_00107.pdb 1 ---MVLQLP--------ERCYCADVIYPMAVVATAERGLIVYQLE---NQPS-EFRRIES 45 usage_00108.pdb 1 ---MVLQLP--------ERCYCADVIYPMAVVATAERGLIVYQLE---NQPS-EFRRIES 45 mvlqlp ercycaDviypmavVataerglivyqLe s efrriES usage_00093.pdb 46 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-------PPNPAKDNFTFKCHRS 98 usage_00095.pdb 58 GLKYQIRDVALLP-K-E-QEGYACSSIDGRVAVEFFDDQGDDYN----SSKRFAFRCHRL 110 usage_00105.pdb 46 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-------PPNPAKDNFTFKCHRS 98 usage_00106.pdb 46 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-------PPNPAKDNFTFKCHRS 98 usage_00107.pdb 46 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-------PPNPAKDNFTFKCHRS 98 usage_00108.pdb 46 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-------PPNPAKDNFTFKCHRS 98 pLKhQhRcVAifk K n ptGfAlgSIeGRVAihyin akdnFtFkCHRs usage_00093.pdb 99 N----SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISAC 153 usage_00095.pdb 111 NLKDTN---LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 167 usage_00105.pdb 99 N----SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISAC 153 usage_00106.pdb 99 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISAC 157 usage_00107.pdb 99 N----SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISAC 153 usage_00108.pdb 99 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISAC 157 N s diYaVNgIaFhPvHgtLaTvGSDGrfSfWdkdaRtKlKtseqld qpisac usage_00093.pdb 154 CFNHNGNIFAYASSYDWSKG-HEFYNP---QKKNYIFLRN- 189 usage_00095.pdb 168 ACS--DNILCLATSDDT-FKTNAAIDQTIELNASSIYIIFD 205 usage_00105.pdb 154 CFNHNGNIFAYASSYDWSKG-HEFYNP---QKKNYIFLRN- 189 usage_00106.pdb 158 CFNHNGNIFAYASSYDWSKG-HEFYNP---QKKNYIFLRN- 193 usage_00107.pdb 154 CFNHNGNIFAYASSYDWSKG-HEFYNP---QKKNYIFLRN- 189 usage_00108.pdb 158 CFNHNGNIFAYASSYDWSKG-HEFYNP---QKKNYIFLRN- 193 cfn gNIfayAsSyDw kg hefynp qkknyIflrn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################