################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:44 2021 # Report_file: c_1101_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00052.pdb # 2: usage_00053.pdb # 3: usage_00054.pdb # 4: usage_00086.pdb # 5: usage_00315.pdb # 6: usage_00336.pdb # 7: usage_00342.pdb # 8: usage_00362.pdb # 9: usage_00690.pdb # 10: usage_00691.pdb # 11: usage_00692.pdb # 12: usage_00700.pdb # # Length: 135 # Identity: 72/135 ( 53.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/135 ( 87.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/135 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 ----DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 56 usage_00053.pdb 1 ----DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 56 usage_00054.pdb 1 -----KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 55 usage_00086.pdb 1 -----KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDESLPVLPA 55 usage_00315.pdb 1 ------VYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 54 usage_00336.pdb 1 DRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDESLPVLPA 60 usage_00342.pdb 1 -----LVYLNVMELVRAVLELKNELSQLPPEGYVVVVKNVGLTLRKLIGSVDDLLPSLPS 55 usage_00362.pdb 1 -RSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDESLPVLPA 59 usage_00690.pdb 1 -----KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 55 usage_00691.pdb 1 -----KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 55 usage_00692.pdb 1 -----KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 55 usage_00700.pdb 1 ----DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPA 56 VYeNVtgLVkAViEmsskiqpaPPEeYVpmVKeVGLaLRtLlatVDe P LPa usage_00052.pdb 57 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 116 usage_00053.pdb 57 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 116 usage_00054.pdb 56 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 115 usage_00086.pdb 56 STHREIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 115 usage_00315.pdb 55 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 114 usage_00336.pdb 61 STHREIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 120 usage_00342.pdb 56 SSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLSEEAKRQMLTASHTLAVDAKNLLDA 115 usage_00362.pdb 60 STHREIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 119 usage_00690.pdb 56 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 115 usage_00691.pdb 56 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 115 usage_00692.pdb 56 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 115 usage_00700.pdb 57 STHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDV 116 SthrEIEmaQKLLNsDL ELINKMkLAQQyvmTSLqqEyKkQMLTAaHaLAVDAKNLLDv usage_00052.pdb 117 IDQARLKM-L--G-- 126 usage_00053.pdb 117 IDQARLKM-L--G-- 126 usage_00054.pdb 116 IDQARLKM-L--G-- 125 usage_00086.pdb 116 IDQARLKM-ISQ--- 126 usage_00315.pdb 115 IDQARLKM-L--G-- 124 usage_00336.pdb 121 IDQARLKMIS--Q-- 131 usage_00342.pdb 116 VDQAKVLA-N--L-A 126 usage_00362.pdb 120 IDQARLKM-I--SQ- 130 usage_00690.pdb 116 IDQARLKM-L--G-- 125 usage_00691.pdb 116 IDQARLKM-L--G-- 125 usage_00692.pdb 116 IDQARLKM-L--G-- 125 usage_00700.pdb 117 IDQARLKM-L--G-- 126 iDQArlkm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################