################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:49:07 2021 # Report_file: c_0069_25.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00037.pdb # 5: usage_00046.pdb # 6: usage_00047.pdb # 7: usage_00048.pdb # 8: usage_00055.pdb # 9: usage_00058.pdb # 10: usage_00075.pdb # 11: usage_00129.pdb # 12: usage_00133.pdb # 13: usage_00134.pdb # 14: usage_00137.pdb # 15: usage_00138.pdb # 16: usage_00167.pdb # 17: usage_00172.pdb # # Length: 251 # Identity: 14/251 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/251 ( 9.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 68/251 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 KTSLITGASSGIGSAIARLLHKLGSKVIISGS-NEEKLKSLGNALK---D-NYTIEVCNL 55 usage_00017.pdb 1 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 60 usage_00018.pdb 1 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANV 59 usage_00037.pdb 1 KGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAI-------GGAFFQVDL 52 usage_00046.pdb 1 KVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGV-EVEAMKANV 59 usage_00047.pdb 1 KVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGV-EVEAMKANV 59 usage_00048.pdb 1 KVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGV-EVEAMKANV 59 usage_00055.pdb 1 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TD-GVKEVADEIADGGG-SAEAVVADL 57 usage_00058.pdb 1 KVALITGCDTGLGQGMAIGLAQAGCDIVGVNI-VE--PKDTIEKVTALGR-RFLSLTADM 56 usage_00075.pdb 1 KIALVTGASRGIGAAIADTLAAAGAKVIGTAT-SESGAAAISERLAQ--W-GGEGRVLNS 56 usage_00129.pdb 1 -LALVTGAGSGIGRAVSVRLAGEGATVAACDL-DRAAAQETVRLLR---G-NHAAFQADV 54 usage_00133.pdb 1 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANV 59 usage_00134.pdb 1 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANV 59 usage_00137.pdb 1 --ALVTGAGNGIGRTIALTYAAEGANVVVSDI-SDEWGRETLALIEGKGG-KAVFQHADT 56 usage_00138.pdb 1 -TALVTGAGNGIGRTIALTYAAEGANVVVSDI-SDEWGRETLALIEGKGG-KAVFQHADT 57 usage_00167.pdb 1 KVAFVQGGSRGIGAAIVKRLASEGAAVAFTYAASADRAEAVASAVTTAGG-KVLAIKADS 59 usage_00172.pdb 1 ACAAVTGAGSGIGLEICRAFAASGARLILIDR-EAAALDRAAQELGA--A-VAARIVADV 56 tG GiG a G usage_00016.pdb 56 ANKEECSNLISKTS-----NLDILVCNA-G-------------DFDKVIDINLKANFILN 96 usage_00017.pdb 61 LEAEAATALVHQAAEVL-GGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTT 118 usage_00018.pdb 60 ADADEVKAMIKEVVSQF-GSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCI 117 usage_00037.pdb 53 EDERERVRFVEEAAYAL-GRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLS 110 usage_00046.pdb 60 AIAEDVDAFFKQAIERF-GRVDILVNNAGITR-DNLLMRMKEDEWDDVININLKGTFLCT 117 usage_00047.pdb 60 AIAEDVDAFFKQAIERF-GRVDILVNNAGITR-DNLLMRMKEDEWDDVININLKGTFLCT 117 usage_00048.pdb 60 AIAEDVDAFFKQAIERF-GRVDILVNNAGITR-DNLLMRMKEDEWDDVININLKGTFLCT 117 usage_00055.pdb 58 ADLEGAANVAEELAATR--RVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLS 114 usage_00058.pdb 57 SNVSGHAELVEKAVAEF-GHVDILVNNAGIIR-REDAIEFSEKNWDDVMNLNIKSVFFMS 114 usage_00075.pdb 57 AEPETVENLIADIEKTF-GKLDILVNNAGITR-DNLLMRMKEEEWDDIMQVNLKSVFRAS 114 usage_00129.pdb 55 SEARAARCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVT 113 usage_00133.pdb 60 ADADEVKA-IKEVVSQF-GSLDVLVNNAGITR-DNLL-R-KEQEWDDVIDTNLKGVFNCI 114 usage_00134.pdb 60 ADADEVKA-IKEVVSQF-GSLDVLVNNAGITR-DNLL-R-KEQEWDDVIDTNLKGVFNCI 114 usage_00137.pdb 57 AHPEDHDELIAAAKRAF-GRLDIACNNAGISGEFTPTAETTDAQWQRVIGINLSGVFYGV 115 usage_00138.pdb 58 AHPEDHDELIAAAKRAF-GRLDIACNNAGISGEFTPTAETTDAQWQRVIGINLSGVFYGV 116 usage_00167.pdb 60 ADAAALQQAVRQAVSHF-GNLDILVNNAGVFT-LGGTEELALDDLDRMLAVNVRSVFVAS 117 usage_00172.pdb 57 TDAEAMTAAAAEAEAVA--PVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWAS 113 A N usage_00016.pdb 97 REAIKKMIQK-R-YGRIINISSI----V-GG--NPGQANYCASKAGLIGMTKSLSYEVAT 147 usage_00017.pdb 119 REAVKLMMKA-R-FGRIVNITSVVGILG-NP------ANYVASKAGLIGFTRAVAKEYAQ 169 usage_00018.pdb 118 QKATPQMLRQ-R-SGAIINLSSVVGAVG-NP--G--QANYVATKAGVIGLTKSAARELAS 170 usage_00037.pdb 111 ALAAREMRKV-G-GGAIVNVASVQGLFA-EQ--E--NAAYNASKGGLVNLTRSLALDLAP 163 usage_00046.pdb 118 KAVSRTMMKQ-R-AGKIINMASVVGLIG-NA--G--QANYVASKAGVIGLTKTTARELAP 170 usage_00047.pdb 118 KAVSRTMMKQ-R-AGKIINMASVVGLIG-NA--G--QANYVASKAGVIGLTKTTARELAP 170 usage_00048.pdb 118 KAVSRTMMKQ-R-AGKIINMASVVGLIG-NA--G--QANYVASKAGVIGLTKTTARELAP 170 usage_00055.pdb 115 RSFGTAMLAH-G-SGRIVTIASMLSFQG-GR--N--VAAYAASKHAVVGLTRALASEWAG 167 usage_00058.pdb 115 QTVARQFIKQ-GKGGKIINIASMLSFQG-GI--R--VPSYTASKSAVMGVTRLMANEWAK 168 usage_00075.pdb 115 KAVLRGMMKQ-R-AGRIINITSVVGVMG-NA--G--QTNYAAAKAGLIGFSKSMAREVGS 167 usage_00129.pdb 114 QAAAQALVSNGC-RGSIINISSIVGKVG-NV--G--QTNYAASKAGVIGLTQTAARELGR 167 usage_00133.pdb 115 QKATPQ-LRQ-R-SGAIINLSSVVGAVG-NP--G--QANYVATKAGVIGLTKSAARELAS 166 usage_00134.pdb 115 QKATPQ-LRQ-R-SGAIINLSSVVGAVG-NP--G--QANYVATKAGVIGLTKSAARELAS 166 usage_00137.pdb 116 RAQIRAMLET-G-GGAIVNISSIAGQIG-IE--G--ITPYTAAKHGVVGLTKTVAWEYGS 168 usage_00138.pdb 117 RAQIRAMLET-G-GGAIVNISSIAGQIG-IE--G--ITPYTAAKHGVVGLTKTVAWEYGS 169 usage_00167.pdb 118 QEAARHM--N-D-GGRIIHIGSTNAERVPFG--G--AAVYAMSKSALVGLTKGMARDLGP 169 usage_00172.pdb 114 RAFGRAMVAR-G-AGAIVNLGSMSGTIV-NRPQF--ASSYMASKGAVHQLTRALAAEWAG 168 G I S Y a K t a usage_00016.pdb 148 RGITVNAVAPGFIK--------L--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNA 197 usage_00017.pdb 170 RGITVNAV---IETE-M-TER-L--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKA 221 usage_00018.pdb 171 RGITVNAVAPGFIVS-DMTD-------ELKEQMLTQIPLARFGQDTDIANTVAFLASDKA 222 usage_00037.pdb 164 LRIRVNAVAPGAIAT-EAVLE-AI-A---RRDWEDLHALRRLGKPEEVAEAVLFLASEKA 217 usage_00046.pdb 171 RGINVNAVAPGFITT-DMTDK-L--DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDAS 226 usage_00047.pdb 171 RGINVNAVAPGFITT-D------------KEAMLAQIPLGAYGTTEDIANAVLFLASDAS 217 usage_00048.pdb 171 RGINVNAVAPGFITT-DMTD------EKTKEAMLAQIPLGAYGTTEDIANAVLFLASDAS 223 usage_00055.pdb 168 RGVGVNALAPGYVVT-ANTAA-LRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA 225 usage_00058.pdb 169 HGINVNAIAPGYMAT-NNTQ-------ERSKEILDRIPAGRWGLPQDLMGPSVFLASSAS 220 usage_00075.pdb 168 RGITVNCVAPGFIDT--------------RQTFTAQTALGRFGDAQDIADAVLFLASDQA 213 usage_00129.pdb 168 HGIRCNSVLPGFIAT-P---------QKVVDKITEMIPMGHLGDPEDVADVVAFLASEDS 217 usage_00133.pdb 167 RGITVNAVAPGFIVSD--TDA-L--SDELKEQ-LTQIPLARFGQDTDIANTVAFLASDKA 220 usage_00134.pdb 167 RGITVNAVAPGFIVSD------L--SDELKEQ-LTQIPLARFGQDTDIANTVAFLASDKA 217 usage_00137.pdb 169 KGIRINSVGPAFINT-TLVQN-V--PLETRRQLEQMHALRRLGETEEVANLVAWLSSDKA 224 usage_00138.pdb 170 KGIRINSVGPAFINT-TLVQN-V--PLETRRQLEQMHALRRLGETEEVANLVAWLSSDKA 225 usage_00167.pdb 170 RSITVNNVQPGPVDT-EMNP-DA---GEFADQLKQLMAIGRYGKDEEIAGFVAYLAGPQA 224 usage_00172.pdb 169 RGVRVNALAPGYVAT-EMTLK-MRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAA 226 N g L s usage_00016.pdb 198 SYITGQTLHVN 208 usage_00017.pdb 222 GYITGQTLCVD 232 usage_00018.pdb 223 KYITGQTIHVN 233 usage_00037.pdb 218 SFITGAILPVD 228 usage_00046.pdb 227 KYITGQTLSVD 237 usage_00047.pdb 218 KYITGQTLSVD 228 usage_00048.pdb 224 KYITGQTLSVD 234 usage_00055.pdb 226 SYVHGQVLAV- 235 usage_00058.pdb 221 DYINGYTIAVD 231 usage_00075.pdb 214 KYITGQTLHVN 224 usage_00129.pdb 218 GYITGTSVEVT 228 usage_00133.pdb 221 KYITGQTIHVN 231 usage_00134.pdb 218 KYITGQTIHVN 228 usage_00137.pdb 225 SFVTGSYYAV- 234 usage_00138.pdb 226 SFVTGSYYAV- 235 usage_00167.pdb 225 GYITGASLSID 235 usage_00172.pdb 227 SYVTGAILAVD 237 G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################