################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:15 2021 # Report_file: c_0131_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00004.pdb # 2: usage_00034.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00044.pdb # 9: usage_00068.pdb # # Length: 169 # Identity: 14/169 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/169 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/169 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 DFVVAQLE-----VPIPAIISAFEIAKAHGVTTVLN--PAPAKAL----PNELLSLIDII 49 usage_00034.pdb 1 KLLSLASIFNSPLLDGKALTEIFTQAKARQ-IICADIKP--RLNETLDDICEALSYVDYL 57 usage_00039.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00040.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00041.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00042.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00043.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00044.pdb 1 SALLMQLE-----SPLESVMAAAKIAHQNKTIVALN--PAPAREL----PDELLALVDII 49 usage_00068.pdb 1 DFLLCDAN-----LPEDTLTALGLIARACEKPLAAI--AISPA--KAVKLKAALGDIDIL 51 l p iA p e L Di usage_00004.pdb 50 VPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIE-AY 108 usage_00034.pdb 58 FPNFAEAKLLTGKE-----TLDEIADCFLACGVKTVVIKTGKDGCFIKRGD--TKVPAVA 110 usage_00039.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00040.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00041.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00042.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00043.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00044.pdb 50 TPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVP-GF 108 usage_00068.pdb 52 FMNEAEARALTG-------V-RDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILH-PP 102 pNe EA LtG a G tv it G g usage_00004.pdb 109 KVN--AID-TTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQ- 153 usage_00034.pdb 111 GIT--AI-DTIGAGDNFASGFIAALL-EGKNLRECARFANATAAISVL- 154 usage_00039.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00040.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00041.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00042.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00043.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00044.pdb 109 RVQ--AV-DTIAAGDTFNGALITALL-EEKPLPEAIRFAHAAAAIAVTR 153 usage_00068.pdb 103 -LIREVK-DVTGAGDAMASGYLAAIA-EGKTIREALRQGAAAAAITV-- 146 a t AGD f al e k l ea rf aaaai V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################