################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:37 2021 # Report_file: c_1072_91.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00141.pdb # 2: usage_00474.pdb # 3: usage_00556.pdb # 4: usage_00557.pdb # 5: usage_00644.pdb # 6: usage_00645.pdb # # Length: 81 # Identity: 14/ 81 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 81 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 81 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 --IRERIEEKLRAAFQPVFLEVVDESYRHNVP----------------AGSESHFKVVLV 42 usage_00474.pdb 1 GPVEAAIRAKLEQALSPEVLELRNES------G-GHA----VPAG---SET--HFRVAVV 44 usage_00556.pdb 1 --TKEQVEASLTSKLKPIHLEVIDIS------GG--------------CGS--SFEVEVV 36 usage_00557.pdb 1 --TKEQVEASLTSKLKPIHLEVIDIS------GG--------------CGS--SFEVEVV 36 usage_00644.pdb 1 --RASRMREKLQKELEPVELVIEDVS------Y-QHAGHAGMKGRTD-DET--HFNVKIV 48 usage_00645.pdb 1 --RASRMREKLQKELEPVELVIEDVS------Y-QHA----------DDET--HFNVKIV 39 L l P L d S F V V usage_00141.pdb 43 SDRFTGERFLNRHRMIYSTL- 62 usage_00474.pdb 45 SSRFEGMSPLQRHRLVHEAL- 64 usage_00556.pdb 37 SEQFEGKRLLERHRMVNAAL- 56 usage_00557.pdb 37 SEQFEGKRLLERHRMVNAAL- 56 usage_00644.pdb 49 SKGFEGMNLVKRHRLVYHLL- 68 usage_00645.pdb 40 SKGFEGMNLVKRHRLVYHLLR 60 S FeG RHR v L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################