################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:15 2021 # Report_file: c_0713_13.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00011.pdb # 3: usage_00049.pdb # 4: usage_00051.pdb # 5: usage_00140.pdb # 6: usage_00211.pdb # 7: usage_00288.pdb # 8: usage_00296.pdb # 9: usage_00297.pdb # # Length: 56 # Identity: 2/ 56 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 56 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 56 ( 32.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----VAVAGRIMTKRGMG---KAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKIS- 48 usage_00011.pdb 1 -NIEVAVAGRMMTRRIMG---KASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKW 52 usage_00049.pdb 1 -NIEVSVAGRMMTRRIMG---KASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKW 52 usage_00051.pdb 1 ----VSVAGRMMTRRIMG---KASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKW 49 usage_00140.pdb 1 LNIEVAVAGRMMTRRIMG---KASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKW 53 usage_00211.pdb 1 ----SIELKNLDGLYRQKVTDKGVYVWK----DRKDYFVGLL---GKDIEKY---- 41 usage_00288.pdb 1 LNIEVSVAGRMMTRRIMG---KASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKW 53 usage_00296.pdb 1 -SLEVAIAGRMMLKRVMG---KASFATVQDGSGQIQFFVTPADVGAETYDAFKKW- 51 usage_00297.pdb 1 -SLEVAIAGRMMLKRVMG---KASFATVQDGSGQIQFFVTPADVGAETYDAFK--- 49 v agr m r mg Ka f g iq V y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################