################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:53 2021 # Report_file: c_1297_101.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00268.pdb # 2: usage_01875.pdb # 3: usage_01876.pdb # 4: usage_01877.pdb # 5: usage_01878.pdb # # Length: 60 # Identity: 4/ 60 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 60 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 60 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00268.pdb 1 -----------EELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQIS- 48 usage_01875.pdb 1 SDLEKASALNTKIRALQGSLENMSKLLKRQNDILQVVSQGW---KY-F----KGNFYYFS 52 usage_01876.pdb 1 ---------NTKIRALQGSLENMSKLLKRQNDILQVVSQGW---KY-F----KGNFYYFS 43 usage_01877.pdb 1 -------ALNTKIRALQGSLENMSKLLKRQNDILQVVSQGW---KY-F----KGNFYYFS 45 usage_01878.pdb 1 ------SALNTKIRALQGSLENMSKLLKRQNDILQVVSQGW---KY-F----KGNFYYFS 46 kiralqgsLenmskllkrqndilqvvsqGw Ky F kgnfyyf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################