################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:21 2021 # Report_file: c_0348_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00014.pdb # 6: usage_00015.pdb # # Length: 132 # Identity: 23/132 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/132 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/132 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 THVLNAAEGRSFMHVNTNANFYKDSGI--TYLGIKANDTQEFNLSAYFERAADFIDQALA 58 usage_00005.pdb 1 GYVLNASNT------CPKPD---FIPES-HFLRVPVNDSFCEKILPWLDKSVDFIEKAKA 50 usage_00006.pdb 1 GYVLNASNT------CPKPD---FIPES-HFLRVPVNDSFCEKILPWLDKSVDFIEKAKA 50 usage_00007.pdb 1 GYVLNASNT------CPKPD---FIPES-HFLRVPVNDSFCEKILPWLDKSVDFIEKAKA 50 usage_00014.pdb 1 SYVLNASNS------CPKPD---FICES-RFMRVPINDNYCEKLLPWLDKSIEFIDKAKL 50 usage_00015.pdb 1 TALLNVSRR------TS--E---ACMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVRE 49 vLNas p nD dFI a usage_00002.pdb 59 QKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQL 117 usage_00005.pdb 51 SN-GCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDY 109 usage_00006.pdb 51 SN-GCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDY 109 usage_00007.pdb 51 SN-GCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDY 109 usage_00014.pdb 51 SS-CQVIVHSLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQLLEY 109 usage_00015.pdb 50 KG-GKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQY 108 g VlVH aGiSRS Ti iAY Mk m A vk R isPNf FlgQLl y usage_00002.pdb 118 NDRLAKEG---- 125 usage_00005.pdb 110 EKKI-------- 113 usage_00006.pdb 110 EKKI-------- 113 usage_00007.pdb 110 EKKIKN------ 115 usage_00014.pdb 110 ERSLKLLAALQG 121 usage_00015.pdb 109 ESEI-------- 112 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################