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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:01:39 2021
# Report_file: c_1407_21.html
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#====================================
# Aligned_structures: 5
#   1: usage_00138.pdb
#   2: usage_00786.pdb
#   3: usage_00787.pdb
#   4: usage_01072.pdb
#   5: usage_01073.pdb
#
# Length:         77
# Identity:       66/ 77 ( 85.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     66/ 77 ( 85.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 77 ( 14.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00138.pdb         1  PRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV   60
usage_00786.pdb         1  PRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV   60
usage_00787.pdb         1  ---LLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV   57
usage_01072.pdb         1  -RNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV   59
usage_01073.pdb         1  PRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV   60
                              LLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHV

usage_00138.pdb        61  DLPQAVISKDTNRQRY-   76
usage_00786.pdb        61  DLPQAVISKDTNRQR--   75
usage_00787.pdb        58  DLPQAVISKDTNRQRYP   74
usage_01072.pdb        60  DLPQAVISKMDT-----   71
usage_01073.pdb        61  DLPQAVISK--------   69
                           DLPQAVISK        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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