################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:02 2021 # Report_file: c_0300_86.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00149.pdb # 2: usage_00243.pdb # 3: usage_00244.pdb # 4: usage_00245.pdb # 5: usage_00334.pdb # 6: usage_00510.pdb # # Length: 123 # Identity: 16/123 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/123 ( 22.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/123 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00149.pdb 1 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG----IPK 56 usage_00243.pdb 1 --VAGITPFNFPVMVPLWMFPMAIVCGNCFVLKPSERDPSSTLYIAQLLQEAG----LPD 54 usage_00244.pdb 1 --VAGITPFNFPVMVPLWMFPMAIVCGNCFVLKPSERDPSSTLYIAQLLQEAG----LPD 54 usage_00245.pdb 1 GVVAGITPFNFPVMVPLWMFPMAIVCGNCFVLKPSERDPSSTLYIAQLLQEAG----LPD 56 usage_00334.pdb 1 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAG----LPD 56 usage_00510.pdb 1 GIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPL 60 v Itp NFP A GN V kP P eAg P usage_00149.pdb 57 SALYLVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAE----- 110 usage_00243.pdb 55 GVMNVVNGD-KEAVDALLHDDRVKAVSFVGSTPIAEYIYRTASANGK-RCQALGGAKNHA 112 usage_00244.pdb 55 GVMNVVNGD-KEAVDALLHDDRVKAVSFVGSTPIAEYIYRTASANGK-RCQALGGAKNHA 112 usage_00245.pdb 57 GVMNVVNGD-KEAVDALLHDDRVKAVSFVGSTPIAEYIYRTASANGK-RCQALGGAKNHA 114 usage_00334.pdb 57 GVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMT-PVMLELGGKAPM 115 usage_00510.pdb 61 GVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKA--GFK-KIALE------- 110 gv n G l f GSt I usage_00149.pdb --- usage_00243.pdb 113 IVM 115 usage_00244.pdb 113 IVM 115 usage_00245.pdb 115 IVM 117 usage_00334.pdb 116 VVM 118 usage_00510.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################