################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:17 2021 # Report_file: c_1256_254.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_01560.pdb # 2: usage_01868.pdb # 3: usage_01947.pdb # 4: usage_01948.pdb # 5: usage_01949.pdb # 6: usage_02141.pdb # 7: usage_03020.pdb # 8: usage_03021.pdb # 9: usage_03209.pdb # 10: usage_03267.pdb # # Length: 75 # Identity: 1/ 75 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 75 ( 25.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 75 ( 48.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01560.pdb 1 GVRVNAISAGPVRT---YDRV--AQTAPL---------R-RNITQEEVGNLGLFL-LSPL 44 usage_01868.pdb 1 GIKVNAVSAGPI---KMLDYN--AMVSPL---------K-KNVDIMEVGNTVAFL-CSDM 44 usage_01947.pdb 1 GTRVNAVSAGPI--L---AAN--ERQTPL---------R-RNVTIEEVGNAGAFL-CSDL 42 usage_01948.pdb 1 GTRVNAVSAGPI----MLAAN--ERQTPL---------R-RNVTIEEVGNAGAFL-CSDL 43 usage_01949.pdb 1 GTRVNAVSAGPIR----LAAN--ERQTPL---------R-RNVTIEEVGNAGAFL-CSDL 43 usage_02141.pdb 1 GVRVNAISAGPI---------R-EAVTPI---------R-RTVTIEDVGNSAAFL-CSDL 39 usage_03020.pdb 1 GVRVNAISAGPI-----------EAVTPI---------R-RTVTIEDVGNSAAFL-CSDL 38 usage_03021.pdb 1 GVRVNAISAGPI--------C--EAVTPI---------R-RTVTIEDVGNSAAFL-CSDL 39 usage_03209.pdb 1 DIACGQIDIGNA---------ATTG----VLQANGEVAAEPTIPIEHIAEAVVYASLP-- 45 usage_03267.pdb 1 GVRVNAISAGPIRTK-MLAHC--EAVTPI---------R-RTVTIEDVGNSAAFL-CSDL 46 g vna saGp ie vgn fl s usage_01560.pdb 45 ASGITGEVVYVD--- 56 usage_01868.pdb 45 ATGITGEVVHVD--- 56 usage_01947.pdb 43 ASGISGEILYVD--- 54 usage_01948.pdb 44 ASGISGEILYVD--- 55 usage_01949.pdb 44 ASGISGEILYVD--- 55 usage_02141.pdb 40 SAGISGEVVHVD--- 51 usage_03020.pdb 39 SAGISGEVVHVD--- 50 usage_03021.pdb 40 SAGISGEVVHVD--- 51 usage_03209.pdb 46 ---LSANVLT--TVA 55 usage_03267.pdb 47 SAGISGEVVHVD--- 58 i ge #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################