################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:46:15 2021 # Report_file: c_0337_15.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00043.pdb # 2: usage_00064.pdb # 3: usage_00077.pdb # 4: usage_00114.pdb # 5: usage_00138.pdb # 6: usage_00139.pdb # 7: usage_00140.pdb # 8: usage_00141.pdb # 9: usage_00142.pdb # 10: usage_00143.pdb # 11: usage_00144.pdb # 12: usage_00145.pdb # 13: usage_00146.pdb # 14: usage_00147.pdb # 15: usage_00148.pdb # 16: usage_00149.pdb # 17: usage_00150.pdb # 18: usage_00151.pdb # 19: usage_00152.pdb # 20: usage_00153.pdb # 21: usage_00154.pdb # 22: usage_00200.pdb # # Length: 105 # Identity: 3/105 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/105 ( 7.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/105 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 SG--HVGITKRLKTMEVLEGESCSFECVLSH--ESASDPAMWTVGGKTVGSSSRFQATRQ 56 usage_00064.pdb 1 -QGSPPCFLRRPRPVRVVSGAEAELKCVVLGEP---PPVVVWEKGGQQLAASERLSFPAD 56 usage_00077.pdb 1 ----LIEVEKPLYGVEVFVGETAHFEIELSE--P--DVHGQWKLKGQPLAASPDCEIIED 52 usage_00114.pdb 1 ----PPVFRKKPHPVETLKGADVHLECELQGTP---PFQVSWHKDKRELRSGKKYKIMSE 53 usage_00138.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00139.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00140.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00141.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00142.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00143.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00144.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00145.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00146.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00147.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00148.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00149.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00150.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00151.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00152.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00153.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00154.pdb 1 ----APRFLTRPKAFVVSVGKDATLSCQIVGNP---TPQVSWEKDQQPVAAGARFRLAQD 53 usage_00200.pdb 1 ----APSFSSVLKDCAVIEGQDFVLQCSVRGTP---VPRITWLLNGQPIQY---ARSTCE 50 v G c W usage_00043.pdb 57 GRKYILVVREAAPSDAGEVVFSVR----G-LTSKASLIVRERSGP 96 usage_00064.pdb 57 GAEHGLLLTAALPTDAGVYVCRARNAAGE-AYAAAAVTVLEP--- 97 usage_00077.pdb 53 GKKHILILHNCQLGMTGEVSFQA-----ANTKSAANLKVK----- 87 usage_00114.pdb 54 NFLTSIHILNVDSADIGEYQCKASNDVGS-DTCVGSITL------ 91 usage_00138.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00139.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00140.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00141.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00142.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00143.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00144.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00145.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00146.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00147.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00148.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00149.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00150.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00151.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00152.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQV------ 91 usage_00153.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00154.pdb 54 GDLYRLTILDLALGDSGQYVCRARNAIGE-AFAAVGLQ------- 90 usage_00200.pdb 51 AGVAELHIQDALPEDHGTYTCLAENALGQ-VSCS----------- 83 l d G a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################