################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:49 2021 # Report_file: c_0066_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00075.pdb # 2: usage_00078.pdb # 3: usage_00134.pdb # 4: usage_00206.pdb # 5: usage_00207.pdb # # Length: 229 # Identity: 24/229 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/229 ( 33.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/229 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 DVIHTENKLYLVFEFLHQ-DLKKFMDASAL-T-GIPLPLIKSYLFQLLQGLAFCHSHRVL 57 usage_00078.pdb 1 EVYENKTDVILILELVAGGELFDFLAEK---E-SLTEEEATEFLKQILNGVYYLHSLQIA 56 usage_00134.pdb 1 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNII 60 usage_00206.pdb 1 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNII 60 usage_00207.pdb 1 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNII 60 e y ly vfEf g dL e a y QiL l ycH i usage_00075.pdb 58 HRDLKPQNLLI-N--T--EGAIKLADFGLARAFGVP-VRTYHEVVTLWYRAPEILLGCKY 111 usage_00078.pdb 57 HFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYE-P 113 usage_00134.pdb 61 HRDVKPHCVLLASK-ENSA-PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-P 117 usage_00206.pdb 61 HRDVKPHCVLLASK-ENSA-PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-P 117 usage_00207.pdb 61 HRDVKPHCVLLASK-ENSA-PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-P 117 HrD KP ll Kl FG A g vgTp f APE v e p usage_00075.pdb 112 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 171 usage_00078.pdb 114 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV--N------------------ 153 usage_00134.pdb 118 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKG--K------------------ 156 usage_00206.pdb 118 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKG--K------------------ 156 usage_00207.pdb 118 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKG--K------------------ 156 yg vD W GvI illsg pF G tk i usage_00075.pdb 172 F-PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 219 usage_00078.pdb 154 -YEF-----EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ----- 191 usage_00134.pdb 157 -YKM-----NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH---- 195 usage_00206.pdb 157 -YKM-----NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH---- 195 usage_00207.pdb 157 -YKM-----NPRQWSHISESAKDLVRRML-------------------- 179 s se akdl rrmL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################