################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:16 2021 # Report_file: c_0004_43.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00249.pdb # 2: usage_00250.pdb # 3: usage_00251.pdb # 4: usage_00303.pdb # 5: usage_00305.pdb # # Length: 310 # Identity: 132/310 ( 42.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 174/310 ( 56.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 106/310 ( 34.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00249.pdb 1 --------------------------------------------YGIPQRALRGHSHFVS 16 usage_00250.pdb 1 ------------------------------------------------QRALRGHSHFVS 12 usage_00251.pdb 1 --------------------------------------------YGIPQRALRGHSHFVS 16 usage_00303.pdb 1 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE 60 usage_00305.pdb 1 ------------------------------------------------KKILHGHNHFVS 12 qr L GHsHFVs usage_00249.pdb 17 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 76 usage_00250.pdb 13 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 72 usage_00251.pdb 17 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 76 usage_00303.pdb 61 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR 120 usage_00305.pdb 13 DVAISSDGQFALSSSWDHTLRLWDLNTGLTTKKFVGHTGDVLSVSFSADNRQIVSASRDR 72 DVviSSDGQFALSgSWDgtLRLWDL tG tTrrFVGHTkDVLSVaFS DNRQIVS SRD usage_00249.pdb 77 TIKLWNTLGVCKYTVQ--D-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 133 usage_00250.pdb 73 TIKLWNTLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 129 usage_00251.pdb 77 TIKLWNTLGVCKYTVQ--D-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 133 usage_00303.pdb 121 TIKLWNTLGECKYTIS-EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 179 usage_00305.pdb 73 SIKLWNTLGECKFDIV--E-DGHTEWVSCVRFSPNPALPVIISAGWDKTVKVWELSNCKL 129 tIKLWNTLG CKyt e H eWVSCVRFSPN P IvS gWDK VKVWnL NCKL usage_00249.pdb 134 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 193 usage_00250.pdb 130 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 189 usage_00251.pdb 134 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 193 usage_00303.pdb 180 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 239 usage_00305.pdb 130 KTTHHGHTGYLNTLAVSPDGSLAASGGKDGITMLWDLNEGKHLYSLDAGDVINALVFSPN 189 kt h GHTGYlnTv VSPDGSLcASGGKDG mLWDLnEGKhLY Ld gd InALcFSPN usage_00249.pdb 194 RYWLCAATGPSIKIWDLEGKIIVDELKQ-E------AEPPQCTSLAWSADGQTLFAGYTD 246 usage_00250.pdb 190 RYWLCAATGPSIKIWDLEGKIIVDELKQ----------PPQCTSLAWSADGQTLFAGYTD 239 usage_00251.pdb 194 RYWLCAATGPSIKIWDLEGKIIVDELKQ-E------VEPPQCTSLAWSADGQTLFAGYTD 246 usage_00303.pdb 240 RYWLCAATEH-------------------------------------------------- 249 usage_00305.pdb 190 RYWLCAATASSIKIFDLESKSLVDDLQPDFDGLSDKARKPECTSLAWSADGQTLFAGFSD 249 RYWLCAAT usage_00249.pdb 247 NLVRVWQ--- 253 usage_00250.pdb 240 NLVRVWQVTI 249 usage_00251.pdb 247 NLVRVWQ--- 253 usage_00303.pdb 250 G-IKIWD--- 255 usage_00305.pdb 250 NLVRVWA--- 256 n vrvW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################