################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:41 2021 # Report_file: c_0679_29.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00172.pdb # 2: usage_00174.pdb # 3: usage_00175.pdb # 4: usage_00176.pdb # 5: usage_00177.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00273.pdb # 9: usage_00274.pdb # 10: usage_00281.pdb # 11: usage_00283.pdb # 12: usage_00604.pdb # 13: usage_00605.pdb # # Length: 68 # Identity: 20/ 68 ( 29.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 68 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 68 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00172.pdb 1 -----------GVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 49 usage_00174.pdb 1 -KLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 59 usage_00175.pdb 1 -----------GVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 49 usage_00176.pdb 1 GKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 60 usage_00177.pdb 1 -KLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 59 usage_00178.pdb 1 -KLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 59 usage_00179.pdb 1 -KLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADG 59 usage_00273.pdb 1 GTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADG 60 usage_00274.pdb 1 GTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADG 60 usage_00281.pdb 1 GQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTFNIDVPNNSGPADG 60 usage_00283.pdb 1 GVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMTTGTVASFETRFSFSIEQPYTRPLPAD 60 usage_00604.pdb 1 -QLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTFNIDVPNNSGPADG 59 usage_00605.pdb 1 GQLRLTNVNDNGEPTLSSLGRAFYSAPIQIWDNTTGAVASFATSFTFNIDVPNNSGPADG 60 G P SlGRa Y Pi IWD TG VAS aTsF F Pn adg usage_00172.pdb 50 LAFAL-VP 56 usage_00174.pdb 60 LAFAL-VP 66 usage_00175.pdb 50 LAFAL-VP 56 usage_00176.pdb 61 LAFAL-VP 67 usage_00177.pdb 60 LAFAL-VP 66 usage_00178.pdb 60 LAFAL-VP 66 usage_00179.pdb 60 LAFAL-VP 66 usage_00273.pdb 61 LAFFL-AP 67 usage_00274.pdb 61 LAFFL-AP 67 usage_00281.pdb 61 LAFVL-LP 67 usage_00283.pdb 61 GLVFFMGP 68 usage_00604.pdb 60 LAFVL-LP 66 usage_00605.pdb 61 LAFVL-LP 67 laf l P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################