################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:01 2021 # Report_file: c_0047_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00054.pdb # 8: usage_00094.pdb # # Length: 246 # Identity: 84/246 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 217/246 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/246 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 60 usage_00049.pdb 1 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 60 usage_00050.pdb 1 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 60 usage_00051.pdb 1 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 60 usage_00052.pdb 1 KVAFITGGGTGLGKG-TTLLSSLGAQCVIASRK-DVLKATAEQISSQTGNKVHAIQCDVR 58 usage_00053.pdb 1 KVAFITGGGTGLGKG-TTLLSSLGAQCVIASRK-DVLKATAEQISSQTGNKVHAIQCDVR 58 usage_00054.pdb 1 KVAFITGGGTGLGKG-TTLLSSLGAQCVIASRK-DVLKATAEQISSQTGNKVHAIQCDVR 58 usage_00094.pdb 1 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 60 KVAFITGGGtGlGkg ttllsslGaqcVIASRk dvlkatAeqissqTGnkvhaiqcDVR usage_00048.pdb 61 DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 120 usage_00049.pdb 61 DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 120 usage_00050.pdb 61 DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 120 usage_00051.pdb 61 DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 120 usage_00052.pdb 59 DPD-VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 117 usage_00053.pdb 59 DPD-VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 117 usage_00054.pdb 59 DPD-VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 117 usage_00094.pdb 61 APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 120 dPd VqntVseliKvaGhpnIvINnAAGNFisPterLSpNAwKTitDIvlnGTafVtlei usage_00048.pdb 121 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 180 usage_00049.pdb 121 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 180 usage_00050.pdb 121 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 180 usage_00051.pdb 121 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 180 usage_00052.pdb 118 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA-SKSLAAEWGKYG-RFNVIQ 175 usage_00053.pdb 118 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA-SKSLAAEWGKYG-RFNVIQ 175 usage_00054.pdb 118 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA-SKSLAAEWGKYG-RFNVIQ 175 usage_00094.pdb 121 YEKFFR-DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLA 179 gkqlik qkGaaflsITtiyaetGsgfvVpsaSAKAgVeA sksLAaEWGkyg RfNviq usage_00048.pdb 181 PGPIKT--------LDPT---GTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 229 usage_00049.pdb 181 PGPIKT--------G-------TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 225 usage_00050.pdb 181 PGPIKT------------GAFGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 228 usage_00051.pdb 181 PGPIKT--------F--------EK-EMIGRIPCGRLGTVEELANLAAFLCSDYASWING 223 usage_00052.pdb 176 PGPIKT--------LDPT---GTFEK-EIGRIPCGRLGTVEELANLAAFLCSDYASWING 223 usage_00053.pdb 176 PGPIKT-----------T---GTFEK-EIGRIPCGRLGTVEELANLAAFLCSDYASWING 220 usage_00054.pdb 176 PGPIK-------------------EK-EIGRIPCGRLGTVEELANLAAFLCSDYASWING 215 usage_00094.pdb 180 PGPISGTEGLRRLG--GP---QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTG 234 PGPIk igriPcgRLGtveElAnlaafLcSdyASwinG usage_00048.pdb 230 AVIKFD 235 usage_00049.pdb 226 AVIKFD 231 usage_00050.pdb 229 AVIKFD 234 usage_00051.pdb 224 AVIKFD 229 usage_00052.pdb 224 AVIKFD 229 usage_00053.pdb 221 AVIKFD 226 usage_00054.pdb 216 AVIKFD 221 usage_00094.pdb 235 AVLVAD 240 AVikfD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################