################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:40 2021 # Report_file: c_1429_162.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00186.pdb # 2: usage_00213.pdb # 3: usage_00214.pdb # 4: usage_00279.pdb # 5: usage_00358.pdb # 6: usage_00363.pdb # 7: usage_00369.pdb # 8: usage_00374.pdb # 9: usage_00375.pdb # 10: usage_00554.pdb # 11: usage_00704.pdb # 12: usage_00706.pdb # 13: usage_01134.pdb # 14: usage_01660.pdb # 15: usage_01661.pdb # # Length: 77 # Identity: 3/ 77 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 77 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 77 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00186.pdb 1 KCSLHELVKILKLKYDPN---NQQFL-------NPEYIKTGNFTSLKEAYSIKYL---KD 47 usage_00213.pdb 1 --NLRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 47 usage_00214.pdb 1 --NLRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 47 usage_00279.pdb 1 ---LRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 46 usage_00358.pdb 1 ---LRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 46 usage_00363.pdb 1 ---LRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 46 usage_00369.pdb 1 --NLRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 47 usage_00374.pdb 1 --NLRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 47 usage_00375.pdb 1 --NLRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 47 usage_00554.pdb 1 ---LRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 46 usage_00704.pdb 1 ---LRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 46 usage_00706.pdb 1 ---LRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 46 usage_01134.pdb 1 ---LRLVVSIAKKYT-G-RGLSFLDLIQEGNQGLIRAVEKFEYKRR---------FKFST 46 usage_01660.pdb 1 -----------KKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 38 usage_01661.pdb 1 ---LRLVISIAKKYT-N-RGLQFLDLIQEGNIGLMKAVDKFEYRRG---------YKFST 46 Kkyt fldL l av kfey r st usage_00186.pdb 48 TKIQDALYRIIYG---- 60 usage_00213.pdb 48 YATWWIRQAINRAIADQ 64 usage_00214.pdb 48 YATWWIRQAINRAIADQ 64 usage_00279.pdb 47 YATWWIRQAINRAIAD- 62 usage_00358.pdb 47 YATWWIRQAITRSIAD- 62 usage_00363.pdb 47 YATWWIRQAITRSIAD- 62 usage_00369.pdb 48 YATWWIRQAITRSIAD- 63 usage_00374.pdb 48 YATWWIRQAITRSIAD- 63 usage_00375.pdb 48 YATWWIRQAITRSIAD- 63 usage_00554.pdb 47 YATWWIRQAINRAIAD- 62 usage_00704.pdb 47 YATWWIRQAINRAIAD- 62 usage_00706.pdb 47 YATWWIRQAITRSIAD- 62 usage_01134.pdb 47 YATWWIRQAINRAIAD- 62 usage_01660.pdb 39 YATWWIRQAITRSIAD- 54 usage_01661.pdb 47 YATWWIRQAITRSIAD- 62 yatwwirqaI r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################