################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:03 2021 # Report_file: c_0558_22.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00113.pdb # 2: usage_00196.pdb # 3: usage_00281.pdb # 4: usage_00282.pdb # # Length: 124 # Identity: 3/124 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/124 ( 38.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/124 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 ---DGVGYTMAYEFDGFGVTAAYSNSKR----T-NDQQ-DRDGNG---DRAESRAVGAKY 48 usage_00196.pdb 1 KKAEQWATGLKYDANNIYLAANYGETRNATPITNKFT-NTSGF--ANKTQDVLLVAQYQF 57 usage_00281.pdb 1 -RAQAWNVGGKFDANNVYLAAMYGQTQNTSRYG-----DLDLI--ANKTENVELVAQYLF 52 usage_00282.pdb 1 KRAQAWNVGGKFDANNVYLAAMYGQTQNTSRYG-----DLDLI--ANKTENVELVAQYLF 53 w g k dann ylaA Yg t n t v lvaqy f usage_00113.pdb 49 DAN--NVYLAAVYAETRNMSIVENTVTDTVEMA--NKTQNLEVVAQYQFDFGLRPAI--- 101 usage_00196.pdb 58 D-FGLRPSIAYTKSKAKDVE-G-------IGDVDLVNYFEVGATYYF--NKNMSTYVDYI 106 usage_00281.pdb 53 D-FGLKPSIGYNQSKGKNLGNG-------YDNQDLVKYISVGSYYYF--NKNMSAVVDYK 102 usage_00282.pdb 54 D-FGLKPSIGYNQSKGKNLGNG-------YDNQDLVKYISVGSYYYF--NKNMSAVVDYK 103 D f psi y sk kn g vky vg yyf nknms v usage_00113.pdb ---- usage_00196.pdb 107 INQI 110 usage_00281.pdb 103 I--- 103 usage_00282.pdb 104 INLL 107 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################