################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:49 2021 # Report_file: c_1109_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00201.pdb # 7: usage_00202.pdb # # Length: 112 # Identity: 32/112 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/112 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/112 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 NQEKRMLIAREIVSRSFQNMVDFLKKRKVRAD-SLTRYKKKAEEASNVSELMGIEGNARE 59 usage_00048.pdb 1 NQEKRMLIAREIVSRSFQNMVDFLKKRKVRAD-SLTRYKKKAEEASNVSELMGIEGNARE 59 usage_00049.pdb 1 NQEKRMLIAREIVSRSFQNMVDFLKKRKVRAD-SLTRYKKKAEEASNVSELMGIEGNARE 59 usage_00050.pdb 1 NQEKRMLIAREIVSRSFQNMVDFLKKRKVRAD-SLTRYKKKAEEASNVSELMGIEGNARE 59 usage_00051.pdb 1 NQEKRMLIAREIVSRSFQNMVDFLKKRKVRAD-SLTRYKKKAEEASNVSELMGIEGNARE 59 usage_00201.pdb 1 DAQKRLYLAKSFVIGSILNLEYVYK-------ISADTYLNKVKETNSIPEL-SVEAEFRK 52 usage_00202.pdb 1 ----RLYLAKSFVIGSILNLEYVYK-------ISADTYLNKVKETNSIPEL-SVEAEFRK 48 R A V S N K S Y K E EL E R usage_00047.pdb 60 EYYSMIDSLVSDERFRIEKRTRRPPKNFANTLISFGNSLLYTTVLSLIYQTH 111 usage_00048.pdb 60 EYYSMIDSLVSDERFRIEKRTRRPPKNFANTLISFGNSLLYTTVLSLIY--- 108 usage_00049.pdb 60 EYYSMIDSLVSDERFRIEKRTRRPPKNFANTLISFGNSLLYTTVLSLIYQTH 111 usage_00050.pdb 60 EYYSMIDSLVSDERFRIEKRTRRPPKNFANTLISFGNSLLYTTVLSLIYQT- 110 usage_00051.pdb 60 EYYSMIDSLVSDERFRIEKRTRRPPKNFANTLISFGNSLLYTTVLSLIYQT- 110 usage_00201.pdb 53 LCYKKLEEVTG-------WELE-PPQNPLNALISFGNSLTYAKVLGEIYKT- 95 usage_00202.pdb 49 LCYKKLEEVTG---WELEKRTKRPPQNPLNALISFGNSLTYAKVLGEIY--- 94 Y krt PP N N LISFGNSL Y VL IY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################