################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:27 2021 # Report_file: c_0728_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00070.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00144.pdb # 5: usage_00145.pdb # # Length: 78 # Identity: 69/ 78 ( 88.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 78 ( 88.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 78 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM 60 usage_00071.pdb 1 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM 60 usage_00072.pdb 1 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM 60 usage_00144.pdb 1 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM 60 usage_00145.pdb 1 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM 60 LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAM usage_00070.pdb 61 NSEFSSVLAA-------- 70 usage_00071.pdb 61 NSEFSSVLAA-------- 70 usage_00072.pdb 61 NSEFSSVLA--------- 69 usage_00144.pdb 61 NSEFSSVLAAQLKHHSEN 78 usage_00145.pdb 61 NSEFSSVLAAQLKHHSE- 77 NSEFSSVLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################