################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:07 2021 # Report_file: c_1419_24.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00410.pdb # 2: usage_00462.pdb # 3: usage_00568.pdb # 4: usage_00569.pdb # 5: usage_00570.pdb # # Length: 66 # Identity: 17/ 66 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 66 ( 56.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 66 ( 43.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00410.pdb 1 --------------------PGIALFYGGLIRGKNVL----S-LTQVTVTFALVCILWVV 35 usage_00462.pdb 1 --------------------PGIGLLYSGLSRK----KHALSLLWASMMASAVCIFQWFF 36 usage_00568.pdb 1 DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV 56 usage_00569.pdb 1 DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV 56 usage_00570.pdb 1 DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV 56 PGIaLfYgGLiRg S LtqvtvtfAlvcilWvv usage_00410.pdb 36 YGYSLA 41 usage_00462.pdb 37 WGYSLA 42 usage_00568.pdb 57 YGYSLA 62 usage_00569.pdb 57 YGYSLA 62 usage_00570.pdb 57 YGYSLA 62 yGYSLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################