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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:48:28 2021
# Report_file: c_0112_11.html
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#====================================
# Aligned_structures: 12
#   1: usage_00052.pdb
#   2: usage_00071.pdb
#   3: usage_00072.pdb
#   4: usage_00129.pdb
#   5: usage_00130.pdb
#   6: usage_00136.pdb
#   7: usage_00172.pdb
#   8: usage_00188.pdb
#   9: usage_00189.pdb
#  10: usage_00250.pdb
#  11: usage_00255.pdb
#  12: usage_00260.pdb
#
# Length:        111
# Identity:       50/111 ( 45.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/111 ( 64.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            3/111 (  2.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00052.pdb         1  LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDS   60
usage_00071.pdb         1  VVMTQSPLSLPVTLGQPASISCKSSQSLLYTDGKTYLYWFLQRPGQSPRRLIYLVSKLDS   60
usage_00072.pdb         1  -VMTQSPLSLPVTLGQPASISCKSSQSLLYTDGKTYLYWFLQRPGQSPRRLIYLVSKLDS   59
usage_00129.pdb         1  IVLTQSPASLAVSLGQPATISCGASKSVRT-SGYSYMDWNQQKPGQPPRRLIYLVSNLES   59
usage_00130.pdb         1  VVMSQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSRLDS   60
usage_00136.pdb         1  VVMTQTPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDS   60
usage_00172.pdb         1  -VMTQTPLTLSVTIGQPASIACKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDS   59
usage_00188.pdb         1  VVMTQSPLSLPVTLGQPASISCRSSQSLVHSDGNTYLNWFQQRPGQSPRRLIYKVSDRDS   60
usage_00189.pdb         1  IVMTQSPLSLPVTLGQPASISCRSSQSLVHSDGNTYLNWFQQRPGQSPRRLIYKVSDRDS   60
usage_00250.pdb         1  LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDS   60
usage_00255.pdb         1  VVMTQSPLSLPVTLGQPASISCKSSQSLLYTDGKTYLYWFLQRPGQSPRRLIYLVSKLDS   60
usage_00260.pdb         1  VVMSQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSRLDS   60
                            Vm Q Pl L Vt GQPAsIsC sSqSl    G tYl W  QrPGQsP RLIY VS  dS

usage_00052.pdb        61  GDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLEL-  110
usage_00071.pdb        61  GVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQSTHFPHTFGGGTKVEI-  110
usage_00072.pdb        60  GVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQSTHFPHTFGGGTKVEI-  109
usage_00129.pdb        60  GVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEI-  109
usage_00130.pdb        61  GVPDRFTGSGSGTDFTLKISRVEAEDLGIYFCWQGSHFPQTFGGGTKLEI-  110
usage_00136.pdb        61  GVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGTHFPYTFGGGTKLEI-  110
usage_00172.pdb        60  GVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPYTFGGGTKLEI-  109
usage_00188.pdb        61  GVPDRFSGSGSGTDFTLKISRVEAEDVGLYYCMQGTHWPPYTFGQGTKVEI  111
usage_00189.pdb        61  GVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPYTFGQGTKVEI  111
usage_00250.pdb        61  GDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLEL-  110
usage_00255.pdb        61  GVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQSTHFPHTFGGGTKVEI-  110
usage_00260.pdb        61  GVPDRFTGSGSGTDFTLKISRVEAEDLGIYFCWQGSHFPQTFGGGTKLEI-  110
                           G PdRF GSGSGTDFTLkIsrVEaED g Y C q  h P            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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