################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:26 2021 # Report_file: c_0505_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00007.pdb # 2: usage_00023.pdb # 3: usage_00069.pdb # 4: usage_00113.pdb # 5: usage_00114.pdb # 6: usage_00116.pdb # 7: usage_00117.pdb # 8: usage_00118.pdb # 9: usage_00217.pdb # 10: usage_00368.pdb # 11: usage_00371.pdb # # Length: 89 # Identity: 80/ 89 ( 89.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/ 89 ( 89.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 89 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 HPTQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 60 usage_00023.pdb 1 --TQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 58 usage_00069.pdb 1 -PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00113.pdb 1 -PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00114.pdb 1 --TQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 58 usage_00116.pdb 1 -PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00117.pdb 1 -PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00118.pdb 1 -PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00217.pdb 1 --TQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 58 usage_00368.pdb 1 -PTQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 usage_00371.pdb 1 -PTQTLLDLFTIQQTQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA 59 TQTLLDLFTIQ T GRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA usage_00007.pdb 61 MPEYILDMLDEKGIAWSLHSSIEEV---- 85 usage_00023.pdb 59 MPEYILDMLDEKGIAWSLHSSIEEVMAEV 87 usage_00069.pdb 60 MPQYILDMLDEKGIAWSLHSSIEEV---- 84 usage_00113.pdb 60 MPQYILDMLDEKGIAWSLHSSIEEV---- 84 usage_00114.pdb 59 MPQYILDMLDEKGIAWSLHSSIEEV---- 83 usage_00116.pdb 60 MPQYILDMLDEKGIAWSLHSSIEEVMAE- 87 usage_00117.pdb 60 MPQYILDMLDEKGIAWSLHSSIEEVMAEV 88 usage_00118.pdb 60 MPQYILDMLDEKGIAWSLHSSIEEVM--- 85 usage_00217.pdb 59 MPQYILDMLDEKGIAWSLHSSIEEVM--- 84 usage_00368.pdb 60 MPEYILDMLDEKGIAWSLHSSIEEV---- 84 usage_00371.pdb 60 MPEYILDMLDEKGIAWSLHSSIEEV---- 84 MP YILDMLDEKGIAWSLHSSIEEV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################