################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:50 2021 # Report_file: c_0571_32.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00222.pdb # 2: usage_00223.pdb # 3: usage_00224.pdb # 4: usage_00225.pdb # 5: usage_00503.pdb # 6: usage_00761.pdb # # Length: 98 # Identity: 3/ 98 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 98 ( 21.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 98 ( 41.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00222.pdb 1 VLREHIHIDG-PLHIIDTAGLREASDE---------------VERIGIERAWQEIEQADR 44 usage_00223.pdb 1 VLREHIHIDG-PLHIIDTAGLREASDE---------------VERIGIERAWQEIEQADR 44 usage_00224.pdb 1 VLREHIHIDGMPLHIIDTAGLREASDE---------------VERIGIERAWQEIEQADR 45 usage_00225.pdb 1 VLREHIHIDGMPLHIIDTAGLREASDE---------------VERIGIERAWQEIEQADR 45 usage_00503.pdb 1 ---GETTIDSQRLLLVDTG--------GL-----------------VETQVEQAIDESDC 32 usage_00761.pdb 1 -VDTSFTYNQQEFVIVD------------TAGMRKKGKVYETTEKYSVLRALKAIDRSEV 47 id l i D ra q I d usage_00222.pdb 45 VLF-VDGTTTDAVDPAEIWPEFIARL--PAKLPITVVR 79 usage_00223.pdb 45 VLF-VDGTTTDAVDPAEIWPEFIARL--PAKLPITVVR 79 usage_00224.pdb 46 VLFMVDGTTTDAVDPAEIWPEFIARL--PAKLPITVVR 81 usage_00225.pdb 46 VLFMVDGTTTDAVDPAEIWPEFIARL--PAKLPITVVR 81 usage_00503.pdb 33 ILFLVDAKAG-LVPA---DEIIAERLRKKG-KKIFLAV 65 usage_00761.pdb 48 VAVVLDGEEG-IIEQ---DKRIAGYAHEAG-KAVVIVV 80 vlf vDg v rl i v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################