################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:38 2021 # Report_file: c_1269_152.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00848.pdb # 2: usage_00885.pdb # 3: usage_00887.pdb # 4: usage_01418.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 65 ( 1.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 65 ( 70.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00848.pdb 1 LWLAPK------------------QGTDA--AMALAMGHVMLREFHLDNPSQY-FTDYV- 38 usage_00885.pdb 1 -KDFHPDHGWESLLMRVISDLPLRLH---WQNKSRDIHYIIRH----L-----------T 41 usage_00887.pdb 1 -KDFHPDHGWESLLMRVISDLPLRLH---WQNKSRDIHYIIRH----L-----------T 41 usage_01418.pdb 1 NVNKEV-------------------G---DGNCFYRALSRLHS----ESRT--SNEHLY- 31 n usage_00848.pdb 39 -RRYT 42 usage_00885.pdb 42 E---- 42 usage_00887.pdb 42 ETL-- 44 usage_01418.pdb 32 -YRL- 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################