################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:40:11 2021 # Report_file: c_1032_12.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00086.pdb # 2: usage_00087.pdb # 3: usage_00166.pdb # 4: usage_00167.pdb # 5: usage_00168.pdb # 6: usage_00322.pdb # 7: usage_00335.pdb # 8: usage_00340.pdb # 9: usage_00341.pdb # 10: usage_00367.pdb # 11: usage_00589.pdb # 12: usage_00590.pdb # 13: usage_00591.pdb # 14: usage_00592.pdb # 15: usage_00593.pdb # 16: usage_00667.pdb # # Length: 86 # Identity: 23/ 86 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 86 ( 38.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 86 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 --LDIRMNLP-P-SQADIEQQARDYATVVNACKAQGAACVGITTWGITDLYSWIPSTYPG 56 usage_00087.pdb 1 --LDIRMNLP-P-SQADIEQQARDYATVVNACKAQGAACVGITTWGITDLYSWIPSTYPG 56 usage_00166.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00167.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00168.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00322.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00335.pdb 1 TELDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 57 usage_00340.pdb 1 --LDIRMTLP-R-TAAKDAQQATDYGAVVEACLVVS-RCVGITVWDYTDKYSWVPSVFPG 55 usage_00341.pdb 1 --LDIRMTLP-R-TAAKDAQQATDYGAVVEACLVVS-RCVGITVWDYTDKYSWVPSVFPG 55 usage_00367.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00589.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00590.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00591.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00592.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00593.pdb 1 --LDIRMRTP-S-DATKLATQAADYKKVVQACMQVT-RCQGVTVWGITDKYSWVPDVFPG 55 usage_00667.pdb 1 ---DVRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDDAYSWVPSAFAG 57 DiRm p QA DY vV aC C G t W tD YSW P pG usage_00086.pdb 57 EGYALLFDDNYVPHPAFNATIQALLA 82 usage_00087.pdb 57 EGYALLFDDNYVPHPAFNATIQALLA 82 usage_00166.pdb 56 EGAALVWDASYAKKPAYAAVMEAF-- 79 usage_00167.pdb 56 EGAALVWDASYAKKPAYAAVMEA--- 78 usage_00168.pdb 56 EGAALVWDASYAKKPAYAAVMEAF-- 79 usage_00322.pdb 56 EGAALVWDASYAKKPAYAAVMEAF-- 79 usage_00335.pdb 58 EGAALVWDASYAKKPAYAAVMEAFG- 82 usage_00340.pdb 56 QGAALPWDEDFAKKPAYHAIAAALN- 80 usage_00341.pdb 56 QGAALPWDEDFAKKPAYHAIAAALN- 80 usage_00367.pdb 56 EGAALVWDASYAKKPAYAAVMEAF-- 79 usage_00589.pdb 56 EGAALVWDASYAKKPAYAAVMEA--- 78 usage_00590.pdb 56 EGAALVWDASYAKKPAYAAVMEA--- 78 usage_00591.pdb 56 EGAALVWDASYAKKPAYAAVMEAFG- 80 usage_00592.pdb 56 EGAALVWDASYAKKPAYAAVMEA--- 78 usage_00593.pdb 56 EGAALVWDASYAKKPAYAAVMEA--- 78 usage_00667.pdb 58 QGGACLFNNTLEAKPAYYAVADALEG 83 G Al d PA A A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################