################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:30 2021 # Report_file: c_1307_16.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00192.pdb # 4: usage_00331.pdb # 5: usage_00556.pdb # 6: usage_00557.pdb # 7: usage_00558.pdb # 8: usage_00559.pdb # 9: usage_00600.pdb # 10: usage_02498.pdb # 11: usage_02620.pdb # 12: usage_02621.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 41 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 41 ( 70.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 --LKEANEILQRSKKGKLPIVN-EDD---------EVAIIA 29 usage_00017.pdb 1 --LKEANEILQRSKKGKLPIVN-EDD---------EVAIIA 29 usage_00192.pdb 1 SLKDFLEACE-TLGTLRLIVTS-SAA---VLEAR------- 29 usage_00331.pdb 1 -----SLRFLKQFHLCP-VGER--D----GRLDLW------ 23 usage_00556.pdb 1 --MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 29 usage_00557.pdb 1 --MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 29 usage_00558.pdb 1 --MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 29 usage_00559.pdb 1 --MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 29 usage_00600.pdb 1 R-MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 30 usage_02498.pdb 1 L-HDLAEQWQQATQQPVINLYGPTECTIAVTYHR------- 33 usage_02620.pdb 1 --MEEIAEKARNFDELRLAVVD-EES---EITYFR------ 29 usage_02621.pdb 1 ---------ARNFDELRLAVVD-EES---EITYFR------ 22 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################