################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:07 2021 # Report_file: c_1262_119.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00608.pdb # 2: usage_00704.pdb # 3: usage_01310.pdb # 4: usage_01365.pdb # 5: usage_01690.pdb # 6: usage_01789.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 66 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 66 ( 66.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00608.pdb 1 --GVLFGVPGAFTP---------------GCSKTHLPGFVEQAEAL--KAKGVQVVASLS 41 usage_00704.pdb 1 -GTVIVHSSL----S-------SI--GWIS------GGAVAVVEAL--EVITE-EGTIIP 37 usage_01310.pdb 1 -GTVIVHSSL----S-------SI--GWIS------GGAVAVVEAL--EVITE-EGTIIP 37 usage_01365.pdb 1 -GTVDVL-H-----WWTSGGEA--------------KAVETLKQQIQK----D-GFIWKD 34 usage_01690.pdb 1 GDAVLVHAAL----R-------KV--GKIVGG--PDDILDAMRDVI--G---PAGTVLGY 40 usage_01789.pdb 1 -PIMDVHSIG----G-------VPGN----------KTNILVVPIV--AAAG--LTIPKT 34 v v usage_00608.pdb 42 -V---- 42 usage_00704.pdb 38 -TQSSD 42 usage_01310.pdb 38 -TQSSD 42 usage_01365.pdb 35 NA---- 36 usage_01690.pdb 41 ---ADW 43 usage_01789.pdb 35 S----- 35 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################