################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:55 2021 # Report_file: c_1153_1.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00647.pdb # 2: usage_00785.pdb # 3: usage_00786.pdb # 4: usage_00787.pdb # 5: usage_00788.pdb # 6: usage_01037.pdb # 7: usage_01152.pdb # 8: usage_01153.pdb # 9: usage_01154.pdb # 10: usage_01492.pdb # 11: usage_01599.pdb # 12: usage_01660.pdb # 13: usage_01908.pdb # 14: usage_02392.pdb # 15: usage_02461.pdb # # Length: 38 # Identity: 7/ 38 ( 18.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 38 ( 34.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 38 ( 28.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00647.pdb 1 EIEYEKQIGKGGFGLVHKGRLVK----DKSVVAIKSL- 33 usage_00785.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTL- 36 usage_00786.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTL- 36 usage_00787.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTLK 37 usage_00788.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTLK 37 usage_01037.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTL- 36 usage_01152.pdb 1 -VKIEEVIGAGEFGEVCRGRLKA--KKE-SCVAIKTL- 33 usage_01153.pdb 1 -VKIEEVIGA---GEVYKGRLK----RE-IYVAIKTL- 28 usage_01154.pdb 1 -VKIEEVIGA---GEVYKGRLK-----E-IYVAIKTL- 27 usage_01492.pdb 1 CVTRQKVIGA--FGEVYKGMLK----TE-VPVAIKTL- 30 usage_01599.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTL- 36 usage_01660.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAPGKKE-SCVAIKTL- 36 usage_01908.pdb 1 CIKIERVIGA-EFGEVCSGRLKLPGKRD-VAVAIKTL- 35 usage_02392.pdb 1 CVKIEQVIGAGEFGEVCSGHLK----RE-IFVAIKTL- 32 usage_02461.pdb 1 EIEVEEVVGR---GVVCKAKWR-----A-KDVAIKQI- 28 e viG G V g l VAIK l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################