################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:11 2021 # Report_file: c_1480_234.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00329.pdb # 2: usage_00330.pdb # 3: usage_01003.pdb # 4: usage_01465.pdb # 5: usage_01573.pdb # 6: usage_01851.pdb # 7: usage_02369.pdb # 8: usage_02457.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 34 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 34 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00329.pdb 1 RHNALNAAAAVAVATEEGI---EDEDILRALVGF 31 usage_00330.pdb 1 RHNALNAAAAVAVATEEGI---EDEDILRALVG- 30 usage_01003.pdb 1 RHNALNAAAAVAVATEEGI---DDEAILRALES- 30 usage_01465.pdb 1 -HNYTNALAALALADAAGL---PRASSLKALTT- 29 usage_01573.pdb 1 -HNYTNALAALALADAAGL---PRASSLKALTT- 29 usage_01851.pdb 1 -YNATNAMIASYVALQEGV---SEEQIRLAFQ-- 28 usage_02369.pdb 1 SHNVENALATIAVAKLAGI---SNQVIRETLSNF 31 usage_02457.pdb 1 ----DKTCKAFQICAIMNLDNISYADCLKQLY-- 28 na a a g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################