################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:48 2021 # Report_file: c_1208_228.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00086.pdb # 2: usage_00148.pdb # 3: usage_00523.pdb # 4: usage_00526.pdb # 5: usage_01176.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 62 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 62 ( 59.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 EVA-SFGLEEA-------DRAGTFHAYV------QADPARKGEVLAVLQEELDRLGR--- 43 usage_00148.pdb 1 ----TVGTGYHSRFGSD-A-EASVMLKRADGSEL-------------SHREFIDYVMNF- 40 usage_00523.pdb 1 --C-WIMHGMASRPGAD-P-LFKVYLDP------D-AR-----GAAEAPSVLDEAMDRLG 43 usage_00526.pdb 1 --C-WIMHGMASRPGAD-P-LFKVYLDP------D-AR-----GAAEAPSVLDEAMDRLG 43 usage_01176.pdb 1 --MIGYQPHG-------TR-GNFFRVVV------A-NSAL-------TCADMDFLLNELE 36 d usage_00086.pdb -- usage_00148.pdb -- usage_00523.pdb -- usage_00526.pdb -- usage_01176.pdb 37 RL 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################