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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:06:52 2021
# Report_file: c_1396_50.html
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#====================================
# Aligned_structures: 8
#   1: usage_00177.pdb
#   2: usage_00287.pdb
#   3: usage_01038.pdb
#   4: usage_01271.pdb
#   5: usage_01273.pdb
#   6: usage_01548.pdb
#   7: usage_01780.pdb
#   8: usage_01781.pdb
#
# Length:        112
# Identity:        8/112 (  7.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     17/112 ( 15.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           44/112 ( 39.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00177.pdb         1  ---FQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLP   57
usage_00287.pdb         1  -HNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLP   59
usage_01038.pdb         1  -YKITQVLFPLLYTVLFFVGLITNGLAMRIFFQI-RSKSNFIIFLKNTVISDLLMILTFP   58
usage_01271.pdb         1  NANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLP   60
usage_01273.pdb         1  ----NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLP   56
usage_01548.pdb         1  --GFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLP   58
usage_01780.pdb         1  --NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQ----SMTDKYRLHLSVADLLFVITLP   54
usage_01781.pdb         1  ---FNKIFLPTIYSIIFLTGIVGNGLVILVMGY----RSMTDKYRLHLSVADLLFVITLP   53
                                    P  Y   F  G  gN              s        l  aD l   TlP

usage_00177.pdb        58  ALIFYYFNKT-DWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP  108
usage_00287.pdb        60  LWAVYTAMEY-RWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIV--  108
usage_01038.pdb        59  FKILSDAKLGT------------GPLRTFVCQ--------------------   78
usage_01271.pdb        61  FWAVDAVA---NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHA  109
usage_01273.pdb        57  FWAVDAVA---NWYFGNFLCKAVHVIYTVNLY--------------------   85
usage_01548.pdb        59  ALIFYYFNKT-DWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGV---  106
usage_01780.pdb        55  FWAVDAVA---NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHA  103
usage_01781.pdb        54  FWAVDAVA---NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVH-  101
                                                        nly                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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