################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:59 2021 # Report_file: c_1297_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01033.pdb # 2: usage_01587.pdb # 3: usage_01594.pdb # 4: usage_03043.pdb # 5: usage_03248.pdb # 6: usage_03249.pdb # # Length: 49 # Identity: 14/ 49 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 49 ( 40.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 49 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01033.pdb 1 DDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAF- 48 usage_01587.pdb 1 ---DRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFC 46 usage_01594.pdb 1 PDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTF---- 45 usage_03043.pdb 1 SDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFC 49 usage_03248.pdb 1 SDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFC 49 usage_03249.pdb 1 SDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFC 49 A W r dS IVdlF Gq KS l C C S TF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################