################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:13 2021 # Report_file: c_1261_222.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00553.pdb # 2: usage_02125.pdb # 3: usage_02126.pdb # 4: usage_02127.pdb # 5: usage_02128.pdb # 6: usage_02129.pdb # 7: usage_02130.pdb # # Length: 45 # Identity: 9/ 45 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 45 ( 62.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 45 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00553.pdb 1 ------STFLVGAGAIGCEMLKNWAMMGVATGES----GHISVTD 35 usage_02125.pdb 1 -----GEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVID 34 usage_02126.pdb 1 -----GEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVID 34 usage_02127.pdb 1 -----GEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVI- 33 usage_02128.pdb 1 -----GEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVID 34 usage_02129.pdb 1 -----GEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVID 34 usage_02130.pdb 1 KKVPHGEVTLVGAGRLGFRTALNLMQIH------RGGPERIKVID 39 evtLVGAGrlGfrtalNlmqih erIkVi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################