################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:56 2021 # Report_file: c_1407_125.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00345.pdb # 2: usage_00346.pdb # 3: usage_00347.pdb # 4: usage_00348.pdb # 5: usage_00999.pdb # 6: usage_01000.pdb # 7: usage_01001.pdb # 8: usage_01002.pdb # # Length: 77 # Identity: 36/ 77 ( 46.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 77 ( 46.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 77 ( 32.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00345.pdb 1 ------LAARLTEELGELAREVNHRYGE--KPKKATEDD--KSEEEIGDVLFVLVCLANS 50 usage_00346.pdb 1 SPL----AARLTEELGELAREVNHRYGE--KP-K----KAK-SEEEIGDVLFVLVCLANS 48 usage_00347.pdb 1 -----PLAARLTEELGELAREVNHRY----------------SEEEIGDVLFVLVCLANS 39 usage_00348.pdb 1 -----PLAARLTEELGELAREVNHRYGE-------------KSEEEIGDVLFVLVCLANS 42 usage_00999.pdb 1 SPLAM--MARLTEEMGELAREVNHYYG-ER-----------SIEEELGDVLFVMICMANS 46 usage_01000.pdb 1 SPLAM--MARLTEEMGELAREVNHYYG-ER-----------SIEEELGDVLFVMICMANS 46 usage_01001.pdb 1 SPLAM--MARLTEEMGELAREVNHYYGEER-----------SIEEELGDVLFVMICMANS 47 usage_01002.pdb 1 SPLAM--MARLTEEMGELAREVNHYYG--------------SIEEELGDVLFVMICMANS 44 ARLTEE GELAREVNH Y EEE GDVLFV C ANS usage_00345.pdb 51 LDISLEEAHDRVHKF-- 65 usage_00346.pdb 49 LDISLEEAHDRVHKF-- 63 usage_00347.pdb 40 LDISLEEAHDRVHKFN- 55 usage_00348.pdb 43 LDISLEEAHDRVHKFNT 59 usage_00999.pdb 47 LNIDLETAHNIVMNKF- 62 usage_01000.pdb 47 LNIDLETAHNIVMNKFN 63 usage_01001.pdb 48 LNIDLETAHNIVMNKF- 63 usage_01002.pdb 45 LNIDLETAHNIVMNKF- 60 L I LE AH V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################