################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:53 2021 # Report_file: c_1207_19.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00444.pdb # 2: usage_00445.pdb # 3: usage_00446.pdb # 4: usage_00508.pdb # 5: usage_00736.pdb # 6: usage_00757.pdb # 7: usage_01111.pdb # 8: usage_01381.pdb # 9: usage_01448.pdb # 10: usage_01449.pdb # 11: usage_01450.pdb # # Length: 44 # Identity: 5/ 44 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 44 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 44 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00444.pdb 1 KNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIE-- 42 usage_00445.pdb 1 KNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIE-- 42 usage_00446.pdb 1 KNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIE-- 42 usage_00508.pdb 1 KNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIE-- 42 usage_00736.pdb 1 KSLYMYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSIE-- 42 usage_00757.pdb 1 EYVYYKVYATYRKYQAIRISHGNISDDGSIYKLTGIWLSKTSAD 44 usage_01111.pdb 1 KSLYMYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSIE-- 42 usage_01381.pdb 1 KSL-YYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSIE-- 41 usage_01448.pdb 1 KSLYMYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSIE-- 42 usage_01449.pdb 1 KSLYMYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSIE-- 42 usage_01450.pdb 1 KSLYMYLQYTYIRYEIIKVLQNTVTERAVLYVPSLGYVKSI--- 41 k l ylqyTYirYeiIkvlq eravlYvpslgyvksi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################