################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:01 2021 # Report_file: c_0311_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00068.pdb # 7: usage_00074.pdb # 8: usage_00076.pdb # 9: usage_00090.pdb # # Length: 178 # Identity: 19/178 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/178 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/178 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -----TPARRRLMRDFKRMKEDAPPGVSASP-L--PDNV-----MVWNAMIIGPADTPYE 47 usage_00008.pdb 1 -----TPARRRLMRDFKRMKEDAPPGVSASP-L--PDNV-----MVWNAMIIGPADTPYE 47 usage_00009.pdb 1 -----TPARRRLMRDFKRMKEDAPPGVSASP-L--PDNV-----MVWNAMIIGPADTPYE 47 usage_00021.pdb 1 ------SVSKRLQQELRTLLMSGDPGITAFP-D--GDNL-----FKWVATLDGPKDTVYE 46 usage_00022.pdb 1 ----SKTAQKRLLKELQQLIKDSPPGIVAGPKS--ENNI-----FIWDCLIQGPPDTPYA 49 usage_00068.pdb 1 -----TPARKRLMRDFKRLQQDPPAGISGAP-Q--DNNI-----MLWNAVIFGPDDTPWD 47 usage_00074.pdb 1 ------------------MKEDAPPGVSASP-L--PDNV-----MVWNAMIIGPADTPYE 34 usage_00076.pdb 1 -----SAARIRLKRDLDSL--DLPPTVTLNV-ITSPDSADRSQS-PKLEVIVRPDEGYYN 51 usage_00090.pdb 1 SAAASKTAQKRLLKELQQLIKDSPPGIVAGPKS--ENNI-----FIWDCLIQGPPDTPYA 53 d ppg p n w i gP dt y usage_00007.pdb 48 DGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN-------------RW 94 usage_00008.pdb 48 DGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN-------------RW 94 usage_00009.pdb 48 DGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN-------------RW 94 usage_00021.pdb 47 SLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKE-------------NW 93 usage_00022.pdb 50 DGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERW 109 usage_00068.pdb 48 GGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN-------------QW 94 usage_00074.pdb 35 DGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEIKLDILQN-------------RW 81 usage_00076.pdb 52 YGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILRE-------------DW 98 usage_00090.pdb 54 DGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSP------YELAEERW 107 g L F YP PP f HPN G c IL W usage_00007.pdb 95 TPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD 152 usage_00008.pdb 95 TPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD 152 usage_00009.pdb 95 TPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD 152 usage_00021.pdb 94 TASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQ-TEYKKVLHEKYKTAQ---S- 146 usage_00022.pdb 110 SPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSL---G- 163 usage_00068.pdb 95 SPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSW----- 147 usage_00074.pdb 82 TPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKS------ 133 usage_00076.pdb 99 SPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSG------- 149 usage_00090.pdb 108 SPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNR-------------------- 145 p v Il s s PN s N A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################