################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:11 2021 # Report_file: c_1256_109.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01023.pdb # 2: usage_01024.pdb # 3: usage_01611.pdb # 4: usage_01612.pdb # 5: usage_01613.pdb # 6: usage_01614.pdb # 7: usage_01615.pdb # 8: usage_01616.pdb # 9: usage_01617.pdb # 10: usage_01618.pdb # 11: usage_01619.pdb # # Length: 36 # Identity: 8/ 36 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 36 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 36 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01023.pdb 1 GDGEIELENIDPSGKKFALEVVDVFQKAGLNPSY-- 34 usage_01024.pdb 1 GDGEIELENIDPSGKKFALEVVDVFQKAGLNPSY-- 34 usage_01611.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 usage_01612.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 usage_01613.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 usage_01614.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 usage_01615.pdb 1 --GSVELQNL--GKEAAAKKLADKLSESGLNAHFSD 32 usage_01616.pdb 1 --GSVELQNL--GKEAAAKKLADKLSESGLNAHFSD 32 usage_01617.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 usage_01618.pdb 1 --GSVELQNL----EAAAKKLADKL----LNAHFSD 26 usage_01619.pdb 1 GSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSD 36 G EL N A D LN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################