################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:13 2021 # Report_file: c_1461_247.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00419.pdb # 2: usage_00972.pdb # 3: usage_02000.pdb # 4: usage_02001.pdb # 5: usage_02246.pdb # # Length: 16 # Identity: 1/ 16 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 16 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 16 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00419.pdb 1 ----LFVPEEALL--- 9 usage_00972.pdb 1 ----WGVPKKHKNTLS 12 usage_02000.pdb 1 ----RFVPKHKLKEEG 12 usage_02001.pdb 1 ----RFVPKHKLKEEG 12 usage_02246.pdb 1 GTVIDHIPAQIG---- 12 vP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################