################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:32 2021 # Report_file: c_0413_16.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00074.pdb # 6: usage_00193.pdb # 7: usage_00194.pdb # # Length: 69 # Identity: 11/ 69 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 69 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 69 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ---RIDIDHVSFQYND---NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD 54 usage_00007.pdb 1 ---RIDIDHVSFQYND---NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD 54 usage_00010.pdb 1 GSGRIELNSVSFRYNG----D-YVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLA 55 usage_00011.pdb 1 ---ENIISVDHLTYQYDENQAP-ALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDGLLP 56 usage_00074.pdb 1 -SGRIELNSVSFRYNG----D-YVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLA 54 usage_00193.pdb 1 ---RIDIDHVSFQYND---NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD 54 usage_00194.pdb 1 ---RIDIDHVSFQYND---NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD 54 ri vsf Yn LkD n e G VG G GK TL usage_00006.pdb 55 VTSGQILI- 62 usage_00007.pdb 55 VTSGQILI- 62 usage_00010.pdb 56 AAGEIFL-- 62 usage_00011.pdb 57 FTQGSVTVG 65 usage_00074.pdb 55 AAGEIFL-- 61 usage_00193.pdb 55 VTSGQILI- 62 usage_00194.pdb 55 VTSGQILI- 62 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################