################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:50 2021 # Report_file: c_0473_66.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00138.pdb # 2: usage_00165.pdb # 3: usage_00183.pdb # 4: usage_00258.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00331.pdb # # Length: 96 # Identity: 10/ 96 ( 10.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 96 ( 29.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 96 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 ---PILVKG-VI----TAEDARLAVQHGAAGIIVSNHGARQLDYVPA-TIMALEEVVKAA 51 usage_00165.pdb 1 -VLKVILETGYFSPEEIARLAEAAIRGGADFLKTS-TG----FGPRGASLEDVALLVRVA 54 usage_00183.pdb 1 -VLKVILETGYFSPEEIARLAEAAIRGGADFLKTS-TG----FGPRGASLEDVALLVRVA 54 usage_00258.pdb 1 -VHKVIVETPYLNEEEIKKAVEICIEAGADFIKTS-TG----FAPRGTTLEEVRLIKSSA 54 usage_00262.pdb 1 -LVKVIIEACLLTDDEKVKACQLSQEAGADYVKTS-TG----FSTGGATVADVALMRKTV 54 usage_00263.pdb 1 KLVKVIIEACLLTDDEKVKACQLSQEAGADYVKTS-TG----FSTGGATVADVALMRKTV 55 usage_00331.pdb 1 -ILKVILETSQLTADEIIAGCVLSSLAGADYVKTS-TG----FNGPGASIENVSLMSAVC 54 kvi e GAd ktS tG f g v l usage_00138.pdb 52 Q-G--RIPVFLDGGVRRGTDVFKALALGAAGVFIGR 84 usage_00165.pdb 55 Q-G--RAQVKAAGGIRDRETALRMLKAGASRLGT-- 85 usage_00183.pdb 55 Q-G--RAQVKAAGGIRDRETALRMLKAGASRLGT-- 85 usage_00258.pdb 55 K-G--RIKVKASGGIRDLETAISMIEAGADRIGTS- 86 usage_00262.pdb 55 G-P--DMGVKASGGARSYEDAIAFIEAGASRIGA-- 85 usage_00263.pdb 56 G-P--DMGVKASGGARSYEDAIAFIEAGASRIGA-- 86 usage_00331.pdb 55 DSLQSETRVKASGGIRTIEDCVKMVRAGAERLGA-- 88 Vka GG R e aGA r g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################