################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:52 2021 # Report_file: c_0758_65.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00139.pdb # 2: usage_00140.pdb # 3: usage_00141.pdb # 4: usage_00146.pdb # 5: usage_00254.pdb # 6: usage_00260.pdb # 7: usage_00319.pdb # 8: usage_00325.pdb # 9: usage_00391.pdb # 10: usage_00429.pdb # 11: usage_00536.pdb # 12: usage_00537.pdb # 13: usage_00720.pdb # 14: usage_00727.pdb # 15: usage_00760.pdb # 16: usage_00811.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 74 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 74 ( 40.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 KILLLDEATS-----AL-DTESEAVVQAALDKARE--GRTTIVIAHRLSTVRNADVIAGF 52 usage_00140.pdb 1 KILLLDEATS-----AL-DTESEAVVQAALDKARE--GRTTIVIAHRLSTVRNADVIAGF 52 usage_00141.pdb 1 KILLLDEATS-----AL-DTESEAVVQAALDKARE--GRTTIVIAHRLSTVRNADVIAGF 52 usage_00146.pdb 1 HILLLDEATS-----AL-DTESEKVVQEALDKARE--GRTCIVIAHRLSTIQNADLIVVI 52 usage_00254.pdb 1 HILLLDEATS-----AL-DTESEKVVQEALDKARE--GRTCIVIAHRLSTIQNADLIVVI 52 usage_00260.pdb 1 RFLALDEPVS-----ML-DPPSQREIFQVLESLKNE-GKGIILVTHELEYLDDMDFILHI 53 usage_00319.pdb 1 KILLLDEATS-----AL-DTESEAVVQAALDKARE--GRTTIVIAHRLSTVRNADVIAGF 52 usage_00325.pdb 1 HILLLDEATS-----AL-DTESEKVVQEALDKARE--GRTCIVIAHRLSTIQNADLIVVI 52 usage_00391.pdb 1 KILLLDEATS-----AL-DAENEYLVQEALDRLMD--GRTVLVIAHRLSTIKNANMVAVL 52 usage_00429.pdb 1 KILIFDEATS-----AL-DYESEHVIMRNMHKICK--GRTVIIIAARLSTVKNADRIIVM 52 usage_00536.pdb 1 HILLLDEATS-----AL-DTESEKVVQEALDKARE--GRTCIVIAHRLSTIQNADLIVVI 52 usage_00537.pdb 1 HILLLDEATS-----AL-DTESEKVVQEALDKARE--GRTCIVIAHRLSTIQNADLIVVI 52 usage_00720.pdb 1 KILLLDQATS-----AL-DTESEAVVQAALDKARE--GRTTIVIAHRLSTVRNADVIAGF 52 usage_00727.pdb 1 NITYWIQ----NYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVY-----SRDA-DIVIQ 50 usage_00760.pdb 1 KIVIFDE---ATS-----DSKTEYLFQKAVEDLRK--NRTLIIIAHR--TISSAESIILL 48 usage_00811.pdb 1 KILLLDEATS-----AL-DAESEGIVQQALDKAAK--GRTTIIIAHRLSTIRNADLIISC 52 i d d t a i usage_00139.pdb 53 DG---GV-IVEQG- 61 usage_00140.pdb 53 DG---GV-IVEQG- 61 usage_00141.pdb 53 DG---GV-IVEQG- 61 usage_00146.pdb 53 QN---GK-VKEHGT 62 usage_00254.pdb 53 QN---GK-VKEHG- 61 usage_00260.pdb 54 SN---GT-IDFCG- 62 usage_00319.pdb 53 DG---GV-IVEQG- 61 usage_00325.pdb 53 QN---GK-VKEHG- 61 usage_00391.pdb 53 DQ---GK-ITEYG- 61 usage_00429.pdb 53 EK---GK-IVEQG- 61 usage_00536.pdb 53 QN---GK-VKEHG- 61 usage_00537.pdb 53 QN---GK-VKEHGT 62 usage_00720.pdb 53 DG---GV-IVEQG- 61 usage_00727.pdb 51 FGVAE-HG------ 57 usage_00760.pdb 49 NK---GK-IVEKG- 57 usage_00811.pdb 53 KN---GQ-VVEVG- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################