################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:52 2021 # Report_file: c_1180_106.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00343.pdb # 2: usage_00344.pdb # 3: usage_00823.pdb # 4: usage_00824.pdb # 5: usage_00825.pdb # 6: usage_00826.pdb # 7: usage_00827.pdb # 8: usage_00828.pdb # 9: usage_01503.pdb # # Length: 29 # Identity: 1/ 29 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 29 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 29 ( 58.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00343.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00344.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00823.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00824.pdb 1 AVVALGGCTASFVSPNGLVVT-------- 21 usage_00825.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00826.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00827.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_00828.pdb 1 -VVALGGCTASFVSPNGLVVT-------- 20 usage_01503.pdb 1 --------TPVVQMATLTYE-TPQGLRIW 20 Tasfvspnglvv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################