################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:18 2021 # Report_file: c_0778_43.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00485.pdb # 2: usage_00495.pdb # 3: usage_00545.pdb # 4: usage_00608.pdb # 5: usage_00609.pdb # 6: usage_00610.pdb # 7: usage_00611.pdb # 8: usage_00652.pdb # 9: usage_00653.pdb # 10: usage_00655.pdb # 11: usage_00790.pdb # 12: usage_00791.pdb # 13: usage_00806.pdb # 14: usage_00807.pdb # 15: usage_00822.pdb # 16: usage_00823.pdb # # Length: 76 # Identity: 13/ 76 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 76 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 76 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00485.pdb 1 GAMWTGDNTADWGYLKASIPMVLSQGIAGFPFAGADVGGFFG--------NPDKDLLTRW 52 usage_00495.pdb 1 GGMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSDIGGFTSYDNENQRTPCTGDLMVRY 60 usage_00545.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00608.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00609.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00610.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00611.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00652.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00653.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00655.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00790.pdb 1 AATWTGDNGSCWDHLKMSVPMSLTLGLSGQPFSGADIGGFLF--------NADADLFGNW 52 usage_00791.pdb 1 AATWTGDNGSCWDHLKMSVPMSLTLGLSGQPFSGADIGGFLF--------NADADLFGNW 52 usage_00806.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00807.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00822.pdb 1 GAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFK--------NPEPELLVRW 52 usage_00823.pdb 1 GAMWTGDNTADWGYLKASIPMVLSQGIAGFPFAGADVGGFFG--------NPDKDLLTRW 52 a WtGDN w lk s pm l g f GaD GGF n L w usage_00485.pdb 53 YQTGIFYPFFRAHAH- 67 usage_00495.pdb 61 VQAGCLLPWFRNHYD- 75 usage_00545.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00608.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00609.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00610.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00611.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00652.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00653.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00655.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00790.pdb 53 IGFGAFYPFARGHACA 68 usage_00791.pdb 53 IGFGAFYPFARG---- 64 usage_00806.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00807.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00822.pdb 53 YQMGAYQPFFRAHAH- 67 usage_00823.pdb 53 YQTGIFYPFFRAHAH- 67 G Pf R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################