################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:51 2021 # Report_file: c_1252_104.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00241.pdb # 2: usage_00326.pdb # 3: usage_01051.pdb # 4: usage_01052.pdb # 5: usage_01205.pdb # # Length: 66 # Identity: 4/ 66 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 66 ( 10.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 66 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00241.pdb 1 --DVVVVCDESNSIY--------P-----WDAVKNFLEKFVQG--LDIGPT-----KTQV 38 usage_00326.pdb 1 --DVVVLLDNSNSMNNERANNSQR-----ALKAGEAVEKLIDK--IT----SNKDNRVAL 47 usage_01051.pdb 1 LIDVVVVCDESNSIY--------P-----WDAVKNFLEKFVQG--LDIGPT-----KTQV 40 usage_01052.pdb 1 -IDVVVVCDESNSIY--------P-----WDAVKNFLEKFVQG--LDIGPT-----KTQV 39 usage_01205.pdb 1 --FVVLDQ----------------ADCMLDMGFMPSIEKMMLHPTMV-ETT------KRQ 35 dVVv EK usage_00241.pdb 39 GLIQY- 43 usage_00326.pdb 48 VTY--- 50 usage_01051.pdb 41 GLIQY- 45 usage_01052.pdb 40 GLIQY- 44 usage_01205.pdb 36 TLMFSA 41 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################