################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:04 2021 # Report_file: c_1297_368.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00013.pdb # 2: usage_00120.pdb # 3: usage_00288.pdb # 4: usage_00465.pdb # 5: usage_00742.pdb # 6: usage_01144.pdb # 7: usage_01575.pdb # 8: usage_01857.pdb # 9: usage_01890.pdb # 10: usage_02814.pdb # 11: usage_02935.pdb # # Length: 38 # Identity: 2/ 38 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 38 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 38 ( 42.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GSRDCYRPCQKRTG--CPNAKC-I-----NKTCKCY-- 28 usage_00120.pdb 1 NQLKCNNHCKSISC--R-AGYCDAATL--WLRCTCTD- 32 usage_00288.pdb 1 -PKQCYPHCKKETG--YPNAKC-M-----NRKCKCF-- 27 usage_00465.pdb 1 VYRTCDKDCKRRGY--R-SGKC-I-----NNACKCYP- 28 usage_00742.pdb 1 TPKDCADPCRKETG--CPYGKC-M-----NRKCKCNR- 29 usage_01144.pdb 1 -PKQCLPPCKAQFGIRA-GAKC-M-----NGKCKCYPH 30 usage_01575.pdb 1 --GRCVNACGKNTE--TYAMKF-L---NKNGKTIIG-- 28 usage_01857.pdb 1 TPKDCADPCRKETG--CPYGKC-M-----NRKCKCN-- 28 usage_01890.pdb 1 -PKQCLPPCKAQFGQSA-GAKC-M-----NGKCKCYP- 29 usage_02814.pdb 1 ----CKRHCKAED---K-EGIC-H-----GTKCKCGV- 23 usage_02935.pdb 1 NEKQCYPHCKKETG--YPNAKC-M-----NRKCKCFG- 29 C C c c c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################