################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:07:03 2021 # Report_file: c_0114_7.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00017.pdb # 2: usage_00026.pdb # 3: usage_00049.pdb # 4: usage_00065.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00092.pdb # 9: usage_00093.pdb # 10: usage_00108.pdb # 11: usage_00111.pdb # 12: usage_00112.pdb # 13: usage_00128.pdb # 14: usage_00141.pdb # # Length: 114 # Identity: 58/114 ( 50.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/114 ( 64.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/114 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVGEGTTAKGEVPD 60 usage_00026.pdb 1 -VTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 59 usage_00049.pdb 1 AVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHGLRLIYYSYGAGSTEKGDIPD 60 usage_00065.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00086.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00087.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00088.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN 60 usage_00092.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMAWYRQDPGMGLRLIHYSVGVGITDQGDVPD 60 usage_00093.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMAWYRQDPGMGLRLIHYSVGVGITDQGDVPD 60 usage_00108.pdb 1 -VTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 59 usage_00111.pdb 1 -VTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 59 usage_00112.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00128.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00141.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 VTQtPkf VlkTGqsmTL CaQdmNH M WYRQDpGmGLRLI YS G T G vP usage_00017.pdb 61 GYNVSRLKKQNFLLGLESAAPSQTSVYFCASRYFLPTQGMGAFFGQGTRLTVVE 114 usage_00026.pdb 60 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSVWTGEGSGELFFGEGSRLTVLE 113 usage_00049.pdb 61 GYKASRPSQENFSLTLESATPSQTSVYFCASGDAGGG--YEQYFGPGTRLTVL- 111 usage_00065.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSVWTGEGSGELFFGEGSRLTVLE 114 usage_00086.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSETDPNT-GELFFGEGSRLTVLE 113 usage_00087.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSYEVSGA-NVLTFGEGSRLTVLE 113 usage_00088.pdb 61 GYNVSRLNKREFSLRLESAAPSQTSVYFCASSPPGGT--DTQYFGEGSRLTVLE 112 usage_00092.pdb 61 GYKVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGWMAGGVELYFGPGTRLTVTE 114 usage_00093.pdb 61 GYKVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGWMAGGVELYFGPGTRLTVT- 113 usage_00108.pdb 60 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 113 usage_00111.pdb 60 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 113 usage_00112.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGL----PEQYFGPGTRLTVTE 110 usage_00128.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 usage_00141.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRPGLAGGRPEQYFGPGTRLTVTE 114 GY vSR F L L SAaPSQTSVYFCAS FG G RLTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################