################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:55:06 2021 # Report_file: c_0440_3.html ################################################################################################ #==================================== # Aligned_structures: 56 # 1: usage_00006.pdb # 2: usage_00008.pdb # 3: usage_00010.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00015.pdb # 7: usage_00017.pdb # 8: usage_00019.pdb # 9: usage_00021.pdb # 10: usage_00023.pdb # 11: usage_00027.pdb # 12: usage_00028.pdb # 13: usage_00029.pdb # 14: usage_00030.pdb # 15: usage_00031.pdb # 16: usage_00032.pdb # 17: usage_00034.pdb # 18: usage_00036.pdb # 19: usage_00038.pdb # 20: usage_00040.pdb # 21: usage_00042.pdb # 22: usage_00044.pdb # 23: usage_00057.pdb # 24: usage_00059.pdb # 25: usage_00061.pdb # 26: usage_00062.pdb # 27: usage_00065.pdb # 28: usage_00068.pdb # 29: usage_00069.pdb # 30: usage_00071.pdb # 31: usage_00073.pdb # 32: usage_00076.pdb # 33: usage_00079.pdb # 34: usage_00081.pdb # 35: usage_00083.pdb # 36: usage_00085.pdb # 37: usage_00105.pdb # 38: usage_00109.pdb # 39: usage_00111.pdb # 40: usage_00120.pdb # 41: usage_00121.pdb # 42: usage_00123.pdb # 43: usage_00125.pdb # 44: usage_00126.pdb # 45: usage_00128.pdb # 46: usage_00134.pdb # 47: usage_00136.pdb # 48: usage_00139.pdb # 49: usage_00144.pdb # 50: usage_00149.pdb # 51: usage_00151.pdb # 52: usage_00153.pdb # 53: usage_00156.pdb # 54: usage_00158.pdb # 55: usage_00160.pdb # 56: usage_00162.pdb # # Length: 73 # Identity: 47/ 73 ( 64.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 73 ( 64.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 73 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00008.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00010.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00012.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00013.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00015.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00017.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00019.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00021.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00023.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00027.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00028.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00029.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00030.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00031.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00032.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00034.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00036.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00038.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00040.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00042.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00044.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00057.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00059.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00061.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00062.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00065.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00068.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00069.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00071.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00073.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00076.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00079.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00081.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00083.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00085.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00105.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00109.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00111.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00120.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00121.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00123.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00125.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00126.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00128.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00134.pdb 1 TEFWLGNEKIHLITTQSTLPYALRIELEDWSGKKGTADYAVFKVGTEEDKYRLTYAYFIG 60 usage_00136.pdb 1 TEFWLGNEKIHLITTQSTLPYALRIELEDWSGKKGTADYAVFKVGTEEDKYRLTYAYFIG 60 usage_00139.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00144.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00149.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00151.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00153.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00156.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00158.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 usage_00160.pdb 1 TEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 60 usage_00162.pdb 1 -EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAG 59 EFWLGNEKIHLI TQS PYALR ELEDW G TADYA FKVG E DKYRLTYAYF G usage_00006.pdb 60 GD----------- 61 usage_00008.pdb 60 GD----------- 61 usage_00010.pdb 60 GD----------- 61 usage_00012.pdb 60 GD----------- 61 usage_00013.pdb 61 GD----------- 62 usage_00015.pdb 60 GD----------- 61 usage_00017.pdb 60 GD----------- 61 usage_00019.pdb 60 GD----------- 61 usage_00021.pdb 60 GD----------- 61 usage_00023.pdb 60 GD----------- 61 usage_00027.pdb ------------- usage_00028.pdb ------------- usage_00029.pdb 60 GD----------- 61 usage_00030.pdb 61 GD----------- 62 usage_00031.pdb 61 GD----------- 62 usage_00032.pdb 61 GDAGDAFDGFDFG 73 usage_00034.pdb 60 GD----------- 61 usage_00036.pdb 60 GD----------- 61 usage_00038.pdb 60 GD----------- 61 usage_00040.pdb 60 GD----------- 61 usage_00042.pdb 60 GD----------- 61 usage_00044.pdb 60 GD----------- 61 usage_00057.pdb 60 GD----------- 61 usage_00059.pdb 60 GD----------- 61 usage_00061.pdb 60 GD----------- 61 usage_00062.pdb 60 GD----------- 61 usage_00065.pdb 60 GD----------- 61 usage_00068.pdb 61 GD----------- 62 usage_00069.pdb 61 GD----------- 62 usage_00071.pdb 60 GD----------- 61 usage_00073.pdb 60 GD----------- 61 usage_00076.pdb 61 GD----------- 62 usage_00079.pdb 61 GD----------- 62 usage_00081.pdb 60 GD----------- 61 usage_00083.pdb ------------- usage_00085.pdb 60 GD----------- 61 usage_00105.pdb 60 GD----------- 61 usage_00109.pdb 60 GD----------- 61 usage_00111.pdb 60 GD----------- 61 usage_00120.pdb 61 GD----------- 62 usage_00121.pdb 60 GD----------- 61 usage_00123.pdb 60 GD----------- 61 usage_00125.pdb 61 GD----------- 62 usage_00126.pdb 60 GD----------- 61 usage_00128.pdb 60 GD----------- 61 usage_00134.pdb 61 GE----------- 62 usage_00136.pdb 61 GE----------- 62 usage_00139.pdb 60 GD----------- 61 usage_00144.pdb 60 GD----------- 61 usage_00149.pdb 60 GD----------- 61 usage_00151.pdb 60 GD----------- 61 usage_00153.pdb 61 G------------ 61 usage_00156.pdb 60 GD----------- 61 usage_00158.pdb 60 GD----------- 61 usage_00160.pdb 61 GD----------- 62 usage_00162.pdb 60 GD----------- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################