################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:06 2021 # Report_file: c_0435_38.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00118.pdb # 2: usage_00119.pdb # 3: usage_00321.pdb # 4: usage_00322.pdb # 5: usage_00469.pdb # 6: usage_00470.pdb # # Length: 115 # Identity: 87/115 ( 75.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/115 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/115 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 60 usage_00119.pdb 1 FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 60 usage_00321.pdb 1 -AFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF-KKLSGHPNIVQFCSAASIGKE 58 usage_00322.pdb 1 FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF-KKLSGHPNIVQFCSAASIGKE 59 usage_00469.pdb 1 -AFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 59 usage_00470.pdb 1 -AFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 59 AFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF KKLSGHPNIVQFCSAASIGKE usage_00118.pdb 61 ESDTGQAEFLLLTELCKGQLVEFLKKMESR--------------G---------- 91 usage_00119.pdb 61 ESDTGQAEFLLLTELCKGQLVEFLKKMESR--------------G---------- 91 usage_00321.pdb 59 ESDTGQAEFLLLTELCKGQLVEFLKK-ESRGPLSCDTVLKIFYQTCRAVQHHRQ- 111 usage_00322.pdb 60 ESDTGQAEFLLLTELCKGQLVEFLKK-ESRGPLSCDTVLKIFYQTCRAVQHHRQ- 112 usage_00469.pdb 60 ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 114 usage_00470.pdb 60 ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR- 113 ESDTGQAEFLLLTELCKGQLVEFLKK ESR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################