################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:12 2021 # Report_file: c_1138_10.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00156.pdb # 2: usage_00204.pdb # 3: usage_00205.pdb # 4: usage_00218.pdb # 5: usage_00219.pdb # # Length: 134 # Identity: 48/134 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/134 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/134 ( 35.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00156.pdb 1 ---VFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIF------------ 45 usage_00204.pdb 1 AASLFKKLLAGSLV-LGAGFAGEAGLAPVLPAFIIGA-GWLY-IYELY-GEGKAAVSTAS 56 usage_00205.pdb 1 AASLFKKLLAGSLV-LGAGFAGEAGLAPVLPAFIIGA-GWLY-IYELY-GEG-------S 49 usage_00218.pdb 1 --SLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTAS 58 usage_00219.pdb 1 AASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAA--VSS 58 lFkKLLagSLV LgaGFaGEAGLapVlpafIiG gWLY IYEly usage_00156.pdb 46 --SQQAFNTIKWIVTVGWAIYPIGYAWGYFGDG-LNEDALNIVYNLADLINKA------- 95 usage_00204.pdb 57 PAVNSAYNA---IIVVGWAIYPAGYAAGYL-G--VYASNLNLIYNLADFVNKILFGLIIW 110 usage_00205.pdb 50 PAVNSAYNA---IIVVGWAIYPAGYAAGYL-G--VYASNLNLIYNLADFVNKILFGLIIW 103 usage_00218.pdb 59 PAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGGVYASNLNLIYNLADFVNKILFGLIIW 118 usage_00219.pdb 59 PAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMG--VYASNLNLIYNLADFVNKILFGLIIW 116 vnsAyNa IivVGWAIYPaGYAaGYl g vyasnLNliYNLADfvNKi usage_00156.pdb -------------- usage_00204.pdb 111 NVAVKESSNAL--- 121 usage_00205.pdb 104 NVAVKESSNAL--- 114 usage_00218.pdb 119 NVAVKESSNAKL-- 130 usage_00219.pdb 117 NVAVKESSNAKLLE 130 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################