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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:53:07 2021
# Report_file: c_0288_16.html
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#====================================
# Aligned_structures: 8
#   1: usage_00104.pdb
#   2: usage_00106.pdb
#   3: usage_00121.pdb
#   4: usage_00122.pdb
#   5: usage_00221.pdb
#   6: usage_00222.pdb
#   7: usage_00412.pdb
#   8: usage_00413.pdb
#
# Length:        157
# Identity:       62/157 ( 39.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     90/157 ( 57.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/157 ( 12.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00104.pdb         1  ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----S   53
usage_00106.pdb         1  ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR----S   53
usage_00121.pdb         1  ---PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGD-   56
usage_00122.pdb         1  ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR-----   52
usage_00221.pdb         1  ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTW------   51
usage_00222.pdb         1  ---EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWR-----   52
usage_00412.pdb         1  YQPSIETGTIKAADGTTDLHYRL-KPANFDPAKKYPVIVYVYGGPHAQCVTGGWQ-----   54
usage_00413.pdb         1  YQPSIETGTIKAADGTTDLHYRL-KPANFDPAKKYPVIVYVYGGPHAQCVTGGWQ-----   54
                               i tGTi AADG T L Y l  P  FDPAKkYPViVYVYGGPhaQ VT  W      

usage_00104.pdb        54  S--VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS  111
usage_00106.pdb        54  S--VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS  111
usage_00121.pdb        57  ----HLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQP  112
usage_00122.pdb        53  ---VGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS  109
usage_00221.pdb        52  ----GGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS  107
usage_00222.pdb        53  ----GGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQS  108
usage_00412.pdb        55  -NGARGWDTY-ASKGY-IFTIDNRGSSNRGLTFENATFRRLGIEEGKDQVKGVEFLKSLP  111
usage_00413.pdb        55  -NGARGWDTY-ASKGY-IFTIDNRGSSNRGLTFENATFRRLGIEEGKDQVKGVEFLKSLP  111
                                gwd Y A kGY  Ft D RGs nRG  Fe    rrlG  E  DQ  GV fLKs  

usage_00104.pdb       112  WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG  148
usage_00106.pdb       112  WVDADRIGVHGWAYGGFMTTNLMLTHGDVFKVGVAGG  148
usage_00121.pdb       113  WVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGA  149
usage_00122.pdb       110  WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAG-  145
usage_00221.pdb       108  WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG  144
usage_00222.pdb       109  WVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG  145
usage_00412.pdb       112  YVDSERIGVHGWSFGGHT-TA-LLRYPEIFKVGVAG-  145
usage_00413.pdb       112  YVDSERIGVHGWSFGGHT-TA-LLRYPEIFKVGVAGG  146
                            VD  RIGVhGWs GG   t   l     fkvGVAG 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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