################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:08 2021 # Report_file: c_1439_73.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00033.pdb # 2: usage_00169.pdb # 3: usage_00277.pdb # 4: usage_00479.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 58 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 58 ( 48.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -AFYSFYLPIAAAMYMAGIDGEKE--HANAKKILL--E-MGEFFQIQDDYLDLF-G-- 49 usage_00169.pdb 1 --FYSFYLPIAAAMYMAGIDGEKE--HANAKKILL--E-MGEFFQIQDDYLDLF-G-- 48 usage_00277.pdb 1 P-ALEK-------------LYALL--DLKANMAERKIRAGLRLFFWFFAEYL-RNTG- 40 usage_00479.pdb 1 -TFYTYLLPLV-GLFVSEAAA---SVENLVERVAH--L-IGEYFQVQDDVDC-F---T 46 fy a ge Fq qdd f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################