################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:50 2021 # Report_file: c_1153_252.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00459.pdb # 2: usage_00740.pdb # 3: usage_00898.pdb # 4: usage_02131.pdb # 5: usage_02132.pdb # 6: usage_02267.pdb # 7: usage_02268.pdb # 8: usage_02356.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 41 ( 7.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 41 ( 48.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00459.pdb 1 --IEIIIAKQRNGP--------VGTVQLAFIKEYNKFVN-- 29 usage_00740.pdb 1 --NGMVHV--ITD-I---QV-GSRITYSCT-TGHRL---IG 28 usage_00898.pdb 1 FGTFTLTG-G-NV-F---EY-GVKAVYTCN-EGYQL---LG 30 usage_02131.pdb 1 --NGHVSP-VQAK-Y---IL-KDSFSIFCE-TGYEL---LQ 29 usage_02132.pdb 1 --NGHVSP-VQAK-Y---IL-KDSFSIFCE-TGYEL---LQ 29 usage_02267.pdb 1 --FTIIQN-LQPQ-Y---QF-RDYFIATCK-QGYQL---IE 29 usage_02268.pdb 1 --FTIIQN-LQPQ-Y---QF-RDYFIATCK-QGYQL---IE 29 usage_02356.pdb 1 TVALNMPP---PR-QLDFTDVGNDARITCD-PYYQL---AV 33 c y l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################