################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:23 2021 # Report_file: c_1355_78.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00342.pdb # 2: usage_00383.pdb # 3: usage_00384.pdb # 4: usage_00392.pdb # 5: usage_00393.pdb # 6: usage_00402.pdb # 7: usage_00408.pdb # 8: usage_00409.pdb # 9: usage_00410.pdb # 10: usage_00507.pdb # 11: usage_00535.pdb # 12: usage_00536.pdb # 13: usage_00623.pdb # 14: usage_00624.pdb # 15: usage_00625.pdb # 16: usage_00626.pdb # 17: usage_00778.pdb # 18: usage_00779.pdb # 19: usage_00780.pdb # 20: usage_00900.pdb # # Length: 36 # Identity: 7/ 36 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 36 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 36 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 DEGQVDMVVDKLVSAARTGEIGDGKIFIS------- 29 usage_00383.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 36 usage_00384.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 36 usage_00392.pdb 1 KEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVR 36 usage_00393.pdb 1 KEEDVDNVIDIICENARTGNPGDGKIFVIPVER--- 33 usage_00402.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 33 usage_00408.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 33 usage_00409.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 33 usage_00410.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 33 usage_00507.pdb 1 EDAQVDTVIDKIVAAARTGENGDGKIFVSPVDQ--- 33 usage_00535.pdb 1 HDAAVEEMITTISQAVKTG----GKIFVSPVDE--- 29 usage_00536.pdb 1 HDAAVEEMITTISQAVKTGEVGDGKIFVSPVDE--- 33 usage_00623.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQ--- 33 usage_00624.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 29 usage_00625.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 29 usage_00626.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVS------- 29 usage_00778.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 36 usage_00779.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 36 usage_00780.pdb 1 EDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIR 36 usage_00900.pdb 1 SRAQVDAVVRLVAASAYTGEIGDGKIFVHPVAE--- 33 V TG GKIFv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################