################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:28 2021 # Report_file: c_0177_24.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00015.pdb # 2: usage_00042.pdb # 3: usage_00050.pdb # 4: usage_00082.pdb # 5: usage_00117.pdb # 6: usage_00118.pdb # 7: usage_00119.pdb # # Length: 191 # Identity: 14/191 ( 7.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/191 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 85/191 ( 44.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLAN 57 usage_00042.pdb 1 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVAK 58 usage_00050.pdb 1 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---NNCVFAPADVTS 57 usage_00082.pdb 1 KIALVTGASRGIGAAIADTLAAAGAKVIGTATSESGAAAISERLAQ--WGGEGRVLNSAE 58 usage_00117.pdb 1 KIALVTGASRGIGRAIAELLVERGACVIGTATSEKGAEAISAYLG---ENGKGLMLNVVD 57 usage_00118.pdb 1 KIALVTGASRGIGRAIAELLVERGACVIGTATSEKGAEAISAYLG---ENGKGLMLNVVD 57 usage_00119.pdb 1 KIALVTGASRGIGRAIAELLVERGACVIGTATSEKGAEAISAYLG---ENGKGLMLNVVD 57 k l TGa G G a A l Ga v l usage_00015.pdb 58 KEECSNLISKTS----NLDILV-CNAGIT-----------DFDKV-----IDINLKANFI 96 usage_00042.pdb 59 --DSEAIIKNVIDKYGTIDILVNNAG-ILRDRSFAKMSKQEWDSV-----QQVHLIGTFN 110 usage_00050.pdb 58 EKDVQTALALAKGKFGRVDVAVNCAG-------------------IFQRVLDVNLMGTFN 98 usage_00082.pdb 59 PETVENLIADIEKTFGKLDILVNNAG-ITRDNLLMRMKEEEWDDI-----MQVNLKSVFR 112 usage_00117.pdb 58 PTSIDTVLATIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWQDI-----IDTNLTSVFR 111 usage_00118.pdb 58 PTSIDTVLATIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWQDI-----IDTNLTSVFR 111 usage_00119.pdb 58 PTSIDTVLATIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWQDI-----IDTNLTSVFR 111 DilV ag nL F usage_00015.pdb 97 LNREAIKKMIQKR------YGRIINISSIVGIGN-P------------GQANYCASKAGL 137 usage_00042.pdb 111 LSRLAWPYFVEKQ------FGRIINITSTS---GIYGNFG---------QANYSSSKAGI 152 usage_00050.pdb 99 VIRLVAGEMGQNEPDQGGQRGVIINTASVAA-----FEGQVGQAAYSAS-------KGGI 146 usage_00082.pdb 113 ASKAVLRGMMKQR------AGRIINITSVV---GVMGNAG---------QTNY------- 147 usage_00117.pdb 112 LSKAVMRAMMKKR------FGRIITIGS-----------G---------QVNYAAAKAGV 145 usage_00118.pdb 112 LSKAVMRAMMKKR------FGRIITIGS-----------G---------QVNYAAAKAGV 145 usage_00119.pdb 112 LSKAVMRAMMKKR------FGRIITIGSVV---GTMGNAG---------QVNYAAAKAGV 153 m GrII i S usage_00015.pdb 138 IGMTKSLSYE- 147 usage_00042.pdb 153 LGLSKTMAIE- 162 usage_00050.pdb 147 VGMTLPIARDL 157 usage_00082.pdb ----------- usage_00117.pdb 146 IGFSKSLAREV 156 usage_00118.pdb 146 IGFSKSLAREV 156 usage_00119.pdb 154 IGFSKSLAREV 164 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################