################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:49 2021 # Report_file: c_1434_184.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_02959.pdb # 2: usage_02982.pdb # 3: usage_02984.pdb # 4: usage_02986.pdb # 5: usage_02988.pdb # 6: usage_02990.pdb # 7: usage_02992.pdb # 8: usage_02994.pdb # 9: usage_02996.pdb # 10: usage_02998.pdb # 11: usage_03000.pdb # 12: usage_03002.pdb # 13: usage_03004.pdb # 14: usage_03603.pdb # 15: usage_03605.pdb # 16: usage_03607.pdb # 17: usage_03609.pdb # 18: usage_03611.pdb # 19: usage_03613.pdb # 20: usage_03615.pdb # 21: usage_03617.pdb # # Length: 92 # Identity: 4/ 92 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 92 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 92 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02959.pdb 1 --PYV-KAQDRLLIERFNELIKGSLECFDTNGSEQIIQTLEIFEKELTNRGTNYFGGNRP 57 usage_02982.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02984.pdb 1 ------------AGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 35 usage_02986.pdb 1 DTWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 47 usage_02988.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02990.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02992.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02994.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02996.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_02998.pdb 1 DTWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 47 usage_03000.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03002.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03004.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03603.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03605.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03607.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03609.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03611.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03613.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03615.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 usage_03617.pdb 1 -TWVYLFGIGDIAGEILRKSSEELIKG----NIEYAKKAKQDLESLYLDLL--------- 46 agEilrksseelikg niEyakkakqdlEslyldll usage_02959.pdb 58 --------------------GMLDYMVW---- 65 usage_02982.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIW--- 75 usage_02984.pdb 36 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 65 usage_02986.pdb 48 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 77 usage_02988.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_02990.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIW--- 75 usage_02992.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIW--- 75 usage_02994.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWKSK 78 usage_02996.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_02998.pdb 48 YIELKNFDLRRKLDYVSNIINKLIEFIIW--- 76 usage_03000.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIW--- 75 usage_03002.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWKSK 78 usage_03004.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03603.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03605.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03607.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03609.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03611.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03613.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWKS- 77 usage_03615.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 usage_03617.pdb 47 YIELKNFDLRRKLDYVSNIINKLIEFIIWK-- 76 nkLiefii #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################