################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:46 2021 # Report_file: c_1445_1508.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_08461.pdb # 2: usage_11370.pdb # 3: usage_12299.pdb # 4: usage_12428.pdb # 5: usage_16064.pdb # # Length: 31 # Identity: 2/ 31 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 31 ( 9.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 31 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_08461.pdb 1 -------LVVIDLGALYQHYNSD--ITRTIV 22 usage_11370.pdb 1 ------RSFLLDAGAEYNGYAAD--LTRTWS 23 usage_12299.pdb 1 DFVVGY-------GLDYDERYRDLSYIGT-- 22 usage_12428.pdb 1 -FVVGY-------GLDYRELYRNLPYIGT-- 21 usage_16064.pdb 1 -FVIGY-------GLDYDDTYRELRDIVVLR 23 G Y t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################