################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:11 2021 # Report_file: c_0705_67.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00042.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00116.pdb # 5: usage_00117.pdb # 6: usage_00207.pdb # 7: usage_00297.pdb # 8: usage_00704.pdb # 9: usage_00751.pdb # # Length: 87 # Identity: 25/ 87 ( 28.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 87 ( 42.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 87 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 GSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTKRVDAMLGTHVVWDVGLQSSCVLCIPWI 60 usage_00114.pdb 1 GSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWI 60 usage_00115.pdb 1 GSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWI 60 usage_00116.pdb 1 GSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWI 60 usage_00117.pdb 1 GSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWI 60 usage_00207.pdb 1 GSLNFLFVFTGAAMVKGKFLIAYTPPGAGKPTTRDQAMQATYAIWDLGLNSSFVFTAPFI 60 usage_00297.pdb 1 GSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTKRVDAMLGTHVVWDVGLQSSCVLCIPWI 60 usage_00704.pdb 1 GSLKFTFLFCGSMMATGKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWI 60 usage_00751.pdb 1 GSLRFSFMFCGTANTTVKLLLAYTPPGIAEPTTRKDAMLGTHVIWDVGLQSTISMVVPWI 60 GS F F G m tgK L aY PPG P R AMlgThv WD GLqSs PwI usage_00042.pdb 61 SQT-HYRYVASDEY-TAGGFITCWYQT 85 usage_00114.pdb 61 SNTH-----------YTTGLVSI---- 72 usage_00115.pdb 61 SNTH-----------YTTGLVSIWYQT 76 usage_00116.pdb 61 SNTH-----------YTTGLVSIWYQT 76 usage_00117.pdb 61 SNTH-----------YTTGLVSIWYQT 76 usage_00207.pdb 61 SPT-HYRQTSYTSAASVDGWVTVWQLT 86 usage_00297.pdb 61 SQT-HYRYVASDEY-TAGGFITCWY-- 83 usage_00704.pdb 61 SNT-TYRQTIDDSF-TEGGYISVFYQT 85 usage_00751.pdb 61 SAS-HYRNTSPGRS--TSGYITCWY-- 82 S t G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################