################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:43:32 2021 # Report_file: c_0131_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00048.pdb # 7: usage_00082.pdb # 8: usage_00083.pdb # 9: usage_00086.pdb # 10: usage_00108.pdb # 11: usage_00109.pdb # 12: usage_00110.pdb # # Length: 171 # Identity: 33/171 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 130/171 ( 76.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/171 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00003.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00045.pdb 1 KWIHIEGRNASEQVK-LQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 51 usage_00046.pdb 1 KWIHIEGRNASEQVK-LQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 51 usage_00047.pdb 1 KWIHIEGRNASEQVK-LQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 51 usage_00048.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00082.pdb 1 KFVCLGNIDPELQLKVLDQIDDP-----------KLVVCDTNFWIE--GKPEELKKVLAR 47 usage_00083.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00086.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00108.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00109.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 usage_00110.pdb 1 KWIHIEGRNASEQVKMLQRID--AHNTRQPPEQKIRVSVEV-----EKPR-EELFQLFGY 52 KwihiegrnaseQvK LqrID irVsvev pr EELfqlfgy usage_00002.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00003.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00045.pdb 52 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 110 usage_00046.pdb 52 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 110 usage_00047.pdb 52 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 110 usage_00048.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00082.pdb 48 VDVFIVNDSEARLLSGDPNLVKTARIIREGP---KTLIIKKGEHGALLFTDN-GIFAAPA 103 usage_00083.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00086.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00108.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00109.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 usage_00110.pdb 53 GDVVFVSKDVAKHL-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDA 111 gDVvfVskdvAkhL GfqsaeealRglygrv avLvcawaEeGAdalgpd kllhsdA usage_00002.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 usage_00003.pdb 112 F-PP------GAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 151 usage_00045.pdb 111 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 157 usage_00046.pdb 111 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 157 usage_00047.pdb 111 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 157 usage_00048.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKC-- 156 usage_00082.pdb 104 FPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAERKAVLYGSAA-SFCVE- 152 usage_00083.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 usage_00086.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 usage_00108.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 usage_00109.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 usage_00110.pdb 112 FPPPRVVDTLGAGDTFNASVIFSLSQG-RS---VQEALRFGCQVAGKKCGL 158 F pp GAGDTFnasvIfsLsqg rs vqeAlrfGcqv gkkc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################