################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:56 2021 # Report_file: c_0470_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00241.pdb # 2: usage_00242.pdb # 3: usage_00243.pdb # 4: usage_00245.pdb # 5: usage_00246.pdb # 6: usage_00247.pdb # 7: usage_00248.pdb # 8: usage_00249.pdb # 9: usage_00462.pdb # 10: usage_00463.pdb # 11: usage_00532.pdb # 12: usage_00582.pdb # 13: usage_00617.pdb # # Length: 112 # Identity: 9/112 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/112 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/112 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00241.pdb 1 KIALIDASLEVEKPE-L--DAEIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00242.pdb 1 KIALIDASLEVEKPE-L--DAEIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00243.pdb 1 KIALIDASLEVEKPE-L--DAEIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00245.pdb 1 KIALIDASLEVEKPE-LDA--EIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00246.pdb 1 KIALIDASLEVEKPE-LDA--EIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00247.pdb 1 KIALIDASLEVEKPE-LDA--EIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00248.pdb 1 KIALIDASLEVEKPE-LDA--EIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00249.pdb 1 KIALIDASLEVEKPE-LDA--EIRINDPTQMQKFLDEEENLIKEKVDKILATGA------ 51 usage_00462.pdb 1 RVVLLDCPLEYKKGESQ-T--NIEIEKEEDWNRILQIEEEQVQLMCEQILAVRP------ 51 usage_00463.pdb 1 YVLILNVSLEYEKTEVN-S--GFFYSSADQRDKLAASERKFVDAKLKKIIDLK-NEVCGM 56 usage_00532.pdb 1 AKIAVLDAA------EQ-I----KA--------FLDEESKYLKDMVDKLASIGA------ 35 usage_00582.pdb 1 KIAVLDASLEVEKPEIS-A--KISITSPDQIKAFLDEEAKYLKDMVDKLASIGA------ 51 usage_00617.pdb 1 RVVLLDCPLEYKKGESQ-T--NIEIEKEEDWNRILQIEEEQVQLMCEQILAVRP------ 51 l l E usage_00241.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00242.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00243.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00245.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00246.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00247.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00248.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00249.pdb 52 -----NVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVS- 97 usage_00462.pdb 52 -----TLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVN- 97 usage_00463.pdb 57 DPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQN- 107 usage_00532.pdb 36 -----NVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIIS- 81 usage_00582.pdb 52 -----NVVICQKGIDDIAQHFLAKRGILAVRRVKRSDIEKLEKALGARIISS 98 usage_00617.pdb 52 -----TLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVN- 97 I KG aq l K g RR K sd G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################