################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:10 2021 # Report_file: c_0615_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00045.pdb # 3: usage_00052.pdb # 4: usage_00053.pdb # 5: usage_00054.pdb # 6: usage_00055.pdb # 7: usage_00137.pdb # 8: usage_00206.pdb # 9: usage_00208.pdb # # Length: 101 # Identity: 75/101 ( 74.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/101 ( 92.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/101 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 59 usage_00045.pdb 1 ALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 60 usage_00052.pdb 1 ALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 60 usage_00053.pdb 1 -LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 59 usage_00054.pdb 1 ALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 60 usage_00055.pdb 1 -LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 59 usage_00137.pdb 1 -LPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLC 59 usage_00206.pdb 1 -LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 59 usage_00208.pdb 1 ALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 60 LPMLKQSNGSIvVvSSLAGKvayPMvAaYSASKFALDGFFSsIRkEysvsrVNVSITLC usage_00011.pdb 60 VLGLIDTETAMKAVSGMQ-----AAPKEECALEIIKGGALR 95 usage_00045.pdb 61 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 99 usage_00052.pdb 61 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 99 usage_00053.pdb 60 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 98 usage_00054.pdb 61 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 99 usage_00055.pdb 60 VLGLIDTETAMKAVSG--I----AAPKEECALEIIKGGALR 94 usage_00137.pdb 60 VLGLIDTETAMKEISG--IINAQASPKEECALEIIKGTALR 98 usage_00206.pdb 60 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 98 usage_00208.pdb 61 VLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALR 99 VLGLIDTETAMKavSG AaPKEECALEIIKGgALR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################