################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:56 2021 # Report_file: c_1028_60.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00202.pdb # 2: usage_00203.pdb # 3: usage_00204.pdb # 4: usage_00205.pdb # 5: usage_00206.pdb # 6: usage_00721.pdb # 7: usage_00731.pdb # 8: usage_00732.pdb # 9: usage_00733.pdb # 10: usage_00734.pdb # 11: usage_00749.pdb # # Length: 91 # Identity: 11/ 91 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 91 ( 45.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 91 ( 51.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00202.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEA-----------EV-------DSI 37 usage_00203.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEA-----------EV-------DSI 37 usage_00204.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEA-----------EV-------DSI 37 usage_00205.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEA-----------EV-------DSI 37 usage_00206.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEA-----------EV-------DSI 37 usage_00721.pdb 1 PK---AIFLMGPTASGKTALAIELRKIL-PVELISV--------------DSALIYKGMD 42 usage_00731.pdb 1 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV-------DSI 53 usage_00732.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV-------DSI 48 usage_00733.pdb 1 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV-------DSI 53 usage_00734.pdb 1 -----NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV-------DSI 48 usage_00749.pdb 1 ---PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV-------DSI 50 nIlmiGPTgvGKTeiArrLaKla apfikve dsi usage_00202.pdb 38 IRD---LTDSAMKLVRQQEIAKN-------- 57 usage_00203.pdb 38 IRD---LTDSAMKLVRQQEIAKNRARAEDVA 65 usage_00204.pdb 38 IRD---LTDSAMKLVRQQEIAK--------- 56 usage_00205.pdb 38 IRD---LTDSAMKLVRQQE------------ 53 usage_00206.pdb 38 IRD---LTDSAMKLVRQQEI----------- 54 usage_00721.pdb 43 IGTAKPNAEELLA---A-------------- 56 usage_00731.pdb 54 IRD---LTDAAVKMVRVQAIEKN-------- 73 usage_00732.pdb 49 IRD---LTDAAVKMVRVQAIEKN-------- 68 usage_00733.pdb 54 IRD---LTDAAVKMVRVQAIEK--------- 72 usage_00734.pdb 49 IRD---LTDAAVKMVRVQAIEKN-------- 68 usage_00749.pdb 51 IRD---LTDAAVKMVRVQAIEKN-------- 70 Ird ltd a k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################