################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:31 2021 # Report_file: c_1316_97.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00014.pdb # 2: usage_00089.pdb # 3: usage_00118.pdb # 4: usage_00189.pdb # 5: usage_00500.pdb # 6: usage_00582.pdb # 7: usage_00583.pdb # 8: usage_00584.pdb # 9: usage_00801.pdb # 10: usage_00808.pdb # 11: usage_00939.pdb # 12: usage_01429.pdb # # Length: 46 # Identity: 2/ 46 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 46 ( 10.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 46 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 SFNNFKNEFSNVLCGH--FGSGWGWLVLNNNNKL-V-ILQTH---- 38 usage_00089.pdb 1 SFNNFKEQFSNILCGH--FGSGWGWLALNNNNKL-V-ILQTH---- 38 usage_00118.pdb 1 ----------KTSVGT--FGSGWAWLVKADG--S-L-ALCSTI--- 27 usage_00189.pdb 1 SVDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 37 usage_00500.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 usage_00582.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 usage_00583.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 usage_00584.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 usage_00801.pdb 1 ------SINSVNDKLNKGKGK--LSLSMN------GNQLKATSSNA 32 usage_00808.pdb 1 SVEGFNNAFTTSGLGQ--FGSGWVWLVYDED--AKA-LKVVST--A 39 usage_00939.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 usage_01429.pdb 1 -VDNFKAEFEKAAASR--FGSGWAWLVLKGD--K-L-AVVSTA--- 36 fGs wL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################