################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:55 2021 # Report_file: c_1159_62.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00043.pdb # 2: usage_00145.pdb # 3: usage_00157.pdb # 4: usage_00274.pdb # 5: usage_00352.pdb # 6: usage_00593.pdb # 7: usage_00599.pdb # 8: usage_00646.pdb # 9: usage_00686.pdb # 10: usage_01288.pdb # 11: usage_01395.pdb # 12: usage_01660.pdb # 13: usage_01932.pdb # 14: usage_01936.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 39 ( 5.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 39 ( 48.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 ---GSGQFAVVKKCREK-----STGLQYAAKFIK----- 26 usage_00145.pdb 1 -NFIKIGIVCIATV--R-----SSGKLVAVKKMD----- 26 usage_00157.pdb 1 --LNQGKFNKIILCEK-------DNKFYALKKYE----- 25 usage_00274.pdb 1 --IGEGTYGVVYKARNK-----LTGEVVALKKIR----- 27 usage_00352.pdb 1 EKIGEGTYGVVYKGRHK-----TTGQVVAMKKIRLESEE 34 usage_00593.pdb 1 ---GEGTYGVVYKARNK-----LTGEVVALKKIR----- 26 usage_00599.pdb 1 --IGSGATAVVQAAYCA-----PKKEKVAIKRIN----- 27 usage_00646.pdb 1 --VYQDSYFTITKLDYSNHKLLPLMADEYKIT------- 30 usage_00686.pdb 1 --IGEGTYGVVYKARNK-----LTGEVVALKKIR----- 27 usage_01288.pdb 1 --IGEGTYGVVYKARNK-----LTGEVVALKKIR----- 27 usage_01395.pdb 1 ---GEGTYGVVYKARNK-----LTGEVVALKKIR----- 26 usage_01660.pdb 1 ---GLGVNGKVLECFHR-----RTGQKCALKLLY----- 26 usage_01932.pdb 1 ---GEGTYGVVYKARNK-----LTGEVVALKKIR----- 26 usage_01936.pdb 1 --IGRGSYAKVLLVRLK-----KTDRIYAMKVVK----- 27 a k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################