################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:35 2021 # Report_file: c_1064_22.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00179.pdb # 2: usage_00180.pdb # 3: usage_00181.pdb # 4: usage_00182.pdb # 5: usage_00183.pdb # 6: usage_00268.pdb # 7: usage_00269.pdb # 8: usage_00270.pdb # 9: usage_00411.pdb # # Length: 45 # Identity: 18/ 45 ( 40.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 45 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 45 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 QLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKN 45 usage_00180.pdb 1 ------------KSCQSFISWTGDGWEFKLSDPDEVARRWGKRK- 32 usage_00181.pdb 1 ------------KSCQSFISWTGDGWEFKLSDPDEVARRWGKRK- 32 usage_00182.pdb 1 ------------KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKN 33 usage_00183.pdb 1 ------------KSCQSFISWTGDGWEFKLSDPDEVARRWGKR-- 31 usage_00268.pdb 1 ------------SANASCITWEGTNGEFKMTDPDEVARRWGER-- 31 usage_00269.pdb 1 ------------SANASCITWEGTNGEFKMTDPDEVARRWGER-- 31 usage_00270.pdb 1 ------------SANASCITWEGTNGEFKMTDPDEVARRWGERKS 33 usage_00411.pdb 1 QLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKN 45 S I W G EFK DPDEVARRWG R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################