################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:06 2021 # Report_file: c_0876_21.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00177.pdb # 2: usage_00217.pdb # 3: usage_00228.pdb # 4: usage_00275.pdb # # Length: 90 # Identity: 11/ 90 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 90 ( 32.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 90 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PPLLPGHMGFSGDFQSFVK 59 usage_00217.pdb 1 NNKSDIWALGCVLYELCTLKHAFE-AGSMKNLVLKIISG-SFPPVSL-H-YSYDLRSLVS 56 usage_00228.pdb 1 --KSDIWALGCVLYELCTLKHAFE-AGSMKNLVLKIISG-SFPPVSL-H-YSYDLRSLVS 54 usage_00275.pdb 1 SVQSDIWSMGLSLVEMAVGRYPIP--MAIFELLDYIVNE--PPPKLP-V-FSLEFQDFVN 54 sDiW lG L El t l ki Pp S d s V usage_00177.pdb 60 DCLTKDHRKRPKYNKLLEHSFIKRYE-T-- 86 usage_00217.pdb 57 QLFKRNPRDRPSVNSILEKGFIAKRIEKFL 86 usage_00228.pdb 55 QLFKRNPRDRPSVNSILEKGFIAKRIEKFL 84 usage_00275.pdb 55 KCLIKNPAERADLKQLMVHAFIKRSD-AE- 82 npr Rp n le FI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################