################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:13 2021 # Report_file: c_1330_32.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00131.pdb # 2: usage_00132.pdb # 3: usage_00149.pdb # 4: usage_00200.pdb # 5: usage_00211.pdb # 6: usage_00472.pdb # 7: usage_00500.pdb # 8: usage_00504.pdb # 9: usage_00514.pdb # 10: usage_00515.pdb # 11: usage_00649.pdb # 12: usage_00894.pdb # 13: usage_01016.pdb # 14: usage_01036.pdb # 15: usage_01037.pdb # # Length: 46 # Identity: 5/ 46 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 46 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 46 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00132.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00149.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00200.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00211.pdb 1 VGNIELSRIMGADVRVIEDGFDIGM------RKSFANALQELEDAG 40 usage_00472.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00500.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00504.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00514.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00515.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_00649.pdb 1 -MNVFRMKLLGANVIPVNSGS----RTLKDAINEALRDWV------ 35 usage_00894.pdb 1 -MNVFRMKLLGANVIPVNSGS----RTLKDAINEALRDWV------ 35 usage_01016.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_01036.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 usage_01037.pdb 1 SPNVFRMRLMGAEVIPVHSGS----ATLKDACNEALRDWS------ 36 Nvfrm l GA Vipv sGs nealrdw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################