################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:53 2021 # Report_file: c_0847_43.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00446.pdb # 2: usage_00447.pdb # 3: usage_00518.pdb # 4: usage_00520.pdb # 5: usage_00660.pdb # 6: usage_00762.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 62 ( 3.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 62 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00446.pdb 1 ------YDLPATIDFILKKTGQ-DKLHYVGHS-QGTTIGFI--AFSTNPKLAKRIKTFYA 50 usage_00447.pdb 1 ------YDLPATIDFILKKTGQ-DKLHYVGHS-QGTTIGFI--AFSTNPKLAKRIKTFYA 50 usage_00518.pdb 1 -FFDHVRYLDAFIEQRG----V-TSAYLVAQD-WGTALAFH--LAARRPDFV---RGLAF 48 usage_00520.pdb 1 GSARNAAIIHEVVAKLP----ENDTIVFVTHS-KGAVDVLEA--LVSYPDLAARTAAVVS 53 usage_00660.pdb 1 ---SIPSIVYDIVRKNG----G---NKILLVGNGLASEIAP-YFS------YP-QYKVTV 42 usage_00762.pdb 1 ------YDLPATIDFIVKKTGQ-KQLHYVGHS-QGTTIGFI--AFSTNPSLAKRIKTFYA 50 v g usage_00446.pdb 51 LA 52 usage_00447.pdb 51 LA 52 usage_00518.pdb 49 M- 49 usage_00520.pdb 54 VA 55 usage_00660.pdb 43 AG 44 usage_00762.pdb 51 LA 52 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################