################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:32 2021 # Report_file: c_1456_87.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00261.pdb # 2: usage_00263.pdb # 3: usage_00265.pdb # 4: usage_00399.pdb # 5: usage_00400.pdb # 6: usage_00473.pdb # 7: usage_00879.pdb # 8: usage_00892.pdb # 9: usage_01317.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 33 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 33 ( 75.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 -QRVVIT-PGEP-AGIGPDLVVQLA-------- 22 usage_00263.pdb 1 -QRVVIT-PGEP-AGIGPDLVVQLA-------- 22 usage_00265.pdb 1 -QRVVIT-PGEP-AGIGPDLVVQLA-------- 22 usage_00399.pdb 1 -TVYVVL-G-GT-SGIGAELAKQLE-------- 21 usage_00400.pdb 1 -TVYVVL-G-GT-SGIGAELAKQ---------- 19 usage_00473.pdb 1 -NNVVVL-GTQWGDEGKGKIVDLL--------- 22 usage_00879.pdb 1 PQITIMAGP--A-AGGAVYSPALT--------- 21 usage_00892.pdb 1 ---TRIV-ILGG-GPAGYEAALVAATSHP---- 24 usage_01317.pdb 1 ----TMI-SLSI-GDP-------------TVFG 14 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################