################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:26 2021 # Report_file: c_1370_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01186.pdb # 2: usage_01227.pdb # 3: usage_01350.pdb # 4: usage_01427.pdb # 5: usage_01428.pdb # 6: usage_01435.pdb # 7: usage_01539.pdb # # Length: 77 # Identity: 3/ 77 ( 3.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 77 ( 19.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 77 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01186.pdb 1 --SVEERIQEEAQCLIEELRKSKGALM----DPTFLFQSITANIICSIVFGKRFHYQDQE 54 usage_01227.pdb 1 QKSFESKILEETKFFNDAIETYKGRPF----DFKQLITNAVSNITNLIIFGERFTYEDTD 56 usage_01350.pdb 1 ---NESRIQREAHFLLEALRKTQGQPF----DPTFLIGCAPCNVIADILFRKHFDYNDEK 53 usage_01427.pdb 1 --SVEERIQEEAQCLIEELRKSKGALM----DPTFLFQSITANIICSIVFGKRFHYQDQE 54 usage_01428.pdb 1 --SVEERIQEEAQCLIEELRKSKGALM----DPTFLFQSITANIICSIVFGKRFHYQDQE 54 usage_01435.pdb 1 ------WVDQLTQEFCERMRVQAG-APVTIQKEFSLLTCSIICYLTF---GNKE---DTL 47 usage_01539.pdb 1 -RSVEERIQEEARCLVEELRKSKGALL----DNTLLFHSITSNIICSIVFGKRFDYKDPV 55 i e e r G d L n g f D usage_01186.pdb 55 FLKMLNLFYQTFSLISS 71 usage_01227.pdb 57 FQHMIELFSENVELA-- 71 usage_01350.pdb 54 FLRLMYLFNENFHLLST 70 usage_01427.pdb 55 FLKMLNLFYQTFSLISS 71 usage_01428.pdb 55 FLKMLNLFYQTFSLISS 71 usage_01435.pdb 48 VHAFHDCVQDLMKTWDH 64 usage_01539.pdb 56 FLRLLDLFFQSFSLISS 72 f lf l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################