################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:47 2021 # Report_file: c_0553_16.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00239.pdb # 2: usage_00334.pdb # 3: usage_01224.pdb # 4: usage_01288.pdb # 5: usage_01327.pdb # 6: usage_01379.pdb # 7: usage_01543.pdb # 8: usage_01694.pdb # 9: usage_01730.pdb # 10: usage_01758.pdb # 11: usage_01776.pdb # 12: usage_01777.pdb # 13: usage_01807.pdb # 14: usage_02141.pdb # # Length: 70 # Identity: 53/ 70 ( 75.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 70 ( 77.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 70 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 58 usage_00334.pdb 1 -DLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCQ 59 usage_01224.pdb 1 -----FVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 55 usage_01288.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCQ 58 usage_01327.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCV 58 usage_01379.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 58 usage_01543.pdb 1 TDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 60 usage_01694.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCV 58 usage_01730.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 58 usage_01758.pdb 1 TDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCV 60 usage_01776.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 58 usage_01777.pdb 1 TDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 60 usage_01807.pdb 1 -----FVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCL 55 usage_02141.pdb 1 --LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCK 58 FVEANIQhGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC usage_00239.pdb 59 LYYVNL-L-- 65 usage_00334.pdb 60 LLYYVN-LL- 67 usage_01224.pdb 56 LYYVNL-L-- 62 usage_01288.pdb 59 LLYYVN-LL- 66 usage_01327.pdb 59 QLLYYV-NLL 67 usage_01379.pdb 59 LYYVNL-L-- 65 usage_01543.pdb 61 KQLLYYVNLL 70 usage_01694.pdb 59 QLLYYV-NLL 67 usage_01730.pdb 59 LYYVNL-LLI 67 usage_01758.pdb 61 QLLYYV-NLL 69 usage_01776.pdb 59 KVQL------ 62 usage_01777.pdb 61 LYYVNL-L-- 67 usage_01807.pdb 56 LYYVNL-LLI 64 usage_02141.pdb 59 VQLLYYVNLL 68 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################