################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:41 2021 # Report_file: c_0886_18.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00115.pdb # 2: usage_00118.pdb # 3: usage_00142.pdb # 4: usage_00161.pdb # 5: usage_00232.pdb # 6: usage_00233.pdb # 7: usage_00234.pdb # 8: usage_00347.pdb # 9: usage_00348.pdb # 10: usage_00349.pdb # 11: usage_00350.pdb # 12: usage_00384.pdb # 13: usage_00402.pdb # 14: usage_00537.pdb # 15: usage_00614.pdb # 16: usage_00712.pdb # # Length: 126 # Identity: 16/126 ( 12.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/126 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/126 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 --SRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSL 58 usage_00118.pdb 1 --GAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 58 usage_00142.pdb 1 ------------LVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 48 usage_00161.pdb 1 --GAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 58 usage_00232.pdb 1 --SAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACL 58 usage_00233.pdb 1 --SAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACL 58 usage_00234.pdb 1 --SAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACL 58 usage_00347.pdb 1 ---------LSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVL 51 usage_00348.pdb 1 -----YDRVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVL 55 usage_00349.pdb 1 ---------LSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVL 51 usage_00350.pdb 1 -----YDRVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVL 55 usage_00384.pdb 1 --SRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSL 58 usage_00402.pdb 1 ---AIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 57 usage_00537.pdb 1 --MDHIRIFQ-EQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCAL 57 usage_00614.pdb 1 -------------VSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 47 usage_00712.pdb 1 GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL 60 D E cL AI pD G r L usage_00115.pdb 59 EDYINDRQYDSRGRFGELLLLLPTLQSITWQMI-EQI--QFIKLFG-MA-KIDNLLQEML 113 usage_00118.pdb 59 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHL--FFFKLIG-DT-PIDTFLMEML 113 usage_00142.pdb 49 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHL--FFFKLIG-DT-PIDTFLMEML 103 usage_00161.pdb 59 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHLFFFKLIG---------------- 101 usage_00232.pdb 59 DEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQ-DHL--FLFR----ITSDR-PLEELFL 110 usage_00233.pdb 59 DEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQ-DHL--FLFR----ITSDR-PLEELFL 110 usage_00234.pdb 59 DEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQ-DHL--FLFR----ITSDR-PLEELFL 110 usage_00347.pdb 52 EEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLF--FFKLI----G-DV-PIDTFLM 103 usage_00348.pdb 56 EEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLF--FFKLI----G-DV-PIDTFLM 107 usage_00349.pdb 52 EEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLF--FFKLI----G-DV-PIDTFLM 103 usage_00350.pdb 56 EEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLF--FFKLI----G-DV-PIDTFLM 107 usage_00384.pdb 59 EDYINDRQYDSRGRFGELLLLLPTLQSITWQMI-EQI--QFIKLFG-MA-KIDNLLQEML 113 usage_00402.pdb 58 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHL--FFFKLIG-DT-PIDTFLMEML 112 usage_00537.pdb 58 EEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVI-EQL----------------------- 93 usage_00614.pdb 48 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHL--FFFKLIGDTP-I-DTF-LMEM 101 usage_00712.pdb 61 EAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCL-EHLFFFKLIG---------------- 103 gRF LLL LP L si usage_00115.pdb 114 LG---- 115 usage_00118.pdb 114 E----- 114 usage_00142.pdb 104 E----- 104 usage_00161.pdb ------ usage_00232.pdb 111 E-QLEA 115 usage_00233.pdb 111 E-QLEA 115 usage_00234.pdb 111 E-QLEA 115 usage_00347.pdb 104 E-MLEG 108 usage_00348.pdb 108 E-MLE- 111 usage_00349.pdb 104 E-MLEG 108 usage_00350.pdb 108 E-MLEG 112 usage_00384.pdb 114 LG---- 115 usage_00402.pdb 113 E----- 113 usage_00537.pdb ------ usage_00614.pdb ------ usage_00712.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################