################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:37 2021 # Report_file: c_0442_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00012.pdb # 2: usage_00058.pdb # 3: usage_00059.pdb # 4: usage_00090.pdb # # Length: 103 # Identity: 29/103 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/103 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/103 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GIRSRSYPLDVMGEIYIALKNLGAEWAKPSLWTIKLRWK-----DLMKMVIQLFQ---NN 52 usage_00058.pdb 1 GIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRT 60 usage_00059.pdb 1 GIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRT 60 usage_00090.pdb 1 GIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRT 60 GIRSqSrPnDiMaEvcrAiKqLdyEWkvvnpyylrvRrK tfsKMslQLyQ rt usage_00012.pdb 53 YLVDFKFDGWESEMST------FSAYPFLHLTTKLIMELAVNS 89 usage_00058.pdb 61 YLLDFRSIDDE-----VAPRPGSHTIEFFEMCANLIKIL---- 94 usage_00059.pdb 61 YLLDFRSIDDE-----VAPRPGSHTIEFFEMCANLIKIL---- 94 usage_00090.pdb 61 YLLDFRSIDDE-----VAPRPGSHTIEFFEMCANLIK------ 92 YLlDFrsiddE shtieFfemcanLIk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################