################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:09:47 2021 # Report_file: c_0187_9.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00058.pdb # 9: usage_00069.pdb # 10: usage_00070.pdb # 11: usage_00101.pdb # 12: usage_00102.pdb # 13: usage_00103.pdb # 14: usage_00126.pdb # 15: usage_00205.pdb # 16: usage_00206.pdb # 17: usage_00207.pdb # 18: usage_00209.pdb # 19: usage_00210.pdb # # Length: 167 # Identity: 87/167 ( 52.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/167 ( 54.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/167 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSS 53 usage_00003.pdb 1 SCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSS 60 usage_00028.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00029.pdb 1 SCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 60 usage_00030.pdb 1 SCTTNCLAPLAKVINDNFGIIEGL-TTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 59 usage_00031.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00032.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00058.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00069.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00070.pdb 1 -------APLAKVIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSS 53 usage_00101.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00102.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00103.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00126.pdb 1 -------APLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSS 53 usage_00205.pdb 1 -------APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSS 53 usage_00206.pdb 1 -------APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSS 53 usage_00207.pdb 1 --TTNCLAPLAKVIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSS 58 usage_00209.pdb 1 -------APLAKIIHEKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSA 53 usage_00210.pdb 1 -------APLAKIIHEKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSA 53 APLAK i FGI EGL TTVHA TATQKTVDGPS KDWRGGR A NIIPS usage_00001.pdb 54 TGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKL 113 usage_00003.pdb 61 TGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKL 120 usage_00028.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00029.pdb 61 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 120 usage_00030.pdb 60 TGAAKAVGKVLPELNGKLTG-AFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGE- 117 usage_00031.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00032.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00058.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00069.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00070.pdb 54 TGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPM 113 usage_00101.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQI-AAVKAAAEGEM 112 usage_00102.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQI-AAVKAAAEGEM 112 usage_00103.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQI-AAVKAAAEGEM 112 usage_00126.pdb 54 TGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERPATYKQICDAIKAASEGEL 113 usage_00205.pdb 54 TGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKL 113 usage_00206.pdb 54 TGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 113 usage_00207.pdb 59 TGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPM 118 usage_00209.pdb 54 TGAAKAVGKVIPALNGRLTGMAFRVPTPNVSVVDLTARLERPATYEQICAAIKAASEGEL 113 usage_00210.pdb 54 TGAAKAVGKVIPALNGRLTGMAFRVPTPNVSVVDLTARLERPATYEQICAAIKAASEGEL 113 TGAAKAVGKv P LNG LTG FRVPT VSVVDLT R A Y I A K A G usage_00001.pdb 114 KGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAW---- 156 usage_00003.pdb 121 KGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYD-- 165 usage_00028.pdb 114 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNE 160 usage_00029.pdb 121 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSW---- 163 usage_00030.pdb 118 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNE 164 usage_00031.pdb 114 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYD-- 158 usage_00032.pdb 114 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYD-- 158 usage_00058.pdb 114 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSW---- 156 usage_00069.pdb 114 KGVLGYTEDDVVSTDFNGEVTSVFDAKAGIALNDN-FVKLVSW---- 155 usage_00070.pdb 114 AGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSW---- 156 usage_00101.pdb 113 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSW---- 155 usage_00102.pdb 113 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSW---- 155 usage_00103.pdb 113 KGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYD-- 157 usage_00126.pdb 114 KGILGYVDEEIVSSDINGIPLTSVFDARAGISLNDNFVKLVSWYD-- 158 usage_00205.pdb 114 KGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYD-- 158 usage_00206.pdb 114 KGVLGYTEDDVVSTDFNGEVTSVFDAKAGIALNDN-FVKLVSWYD-- 157 usage_00207.pdb 119 AGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYD-- 163 usage_00209.pdb 114 KGILGYTEDEVVSTDMNGVALTSVFDVKAGISLNDRFVKLISWYD-- 158 usage_00210.pdb 114 KGILGYTEDEVVSTDMNGVALTSVFDVKAGISLNDRFVKLISWYD-- 158 G Y e VStD G FVKL W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################