################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:27 2021 # Report_file: c_0994_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00122.pdb # 2: usage_00329.pdb # 3: usage_00592.pdb # 4: usage_00710.pdb # 5: usage_00858.pdb # 6: usage_00859.pdb # # Length: 67 # Identity: 19/ 67 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 67 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 67 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 VVGAVHYPGLPEHPQHAVVKAQ-SAPGAIVSFDYLG---GPAERLLDRFTLFTCGVSLGG 56 usage_00329.pdb 1 --ELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIG-AGRRFMNALQLFSRAVSLGD 57 usage_00592.pdb 1 --TRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLE-AGRRMINSVELCLLAVSLGD 57 usage_00710.pdb 1 --GAVHYPGLPEHPQHAVVKAQ-SAPGAIVSFDYLG---GPAERLLDRFTLFTCGVSLGG 54 usage_00858.pdb 1 --GAVHYPGLPEHPQHAVVKAQMSAPGAIVSFDYLG---GPAERLLDRFTLFTCGVSLGG 55 usage_00859.pdb 1 ---AVHYPGLPEHPQHAVVKAQMSAPGAIVSFDYLG---GPAERLLDRFTLFTCGVSLGG 54 vhYPGL hPQ Q S PG i sF G R Lf VSLG usage_00122.pdb 57 VHSLVEC 63 usage_00329.pdb 58 AESLAQH 64 usage_00592.pdb 58 TETLIQH 64 usage_00710.pdb 55 VHSLVEC 61 usage_00858.pdb 56 VHSLVEC 62 usage_00859.pdb 55 VHSLVEC 61 sL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################