################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:26 2021 # Report_file: c_1015_20.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00143.pdb # 2: usage_00402.pdb # 3: usage_00537.pdb # 4: usage_00538.pdb # # Length: 69 # Identity: 16/ 69 ( 23.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 69 ( 55.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 69 ( 44.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 --FEIRWHGRA--GQ--GAKSASQ-LAEAALEAGKYVQAFPEYGARTGA----------- 42 usage_00402.pdb 1 --KQITVWARGVVM-NKDARDIVVALTEAAAKEGKYVQAWEN-------YVDLPDRIYVP 50 usage_00537.pdb 1 NLKQITVWARGVVM-NKDARDIVVALTEAA----KYVQAWEN-------YVDLPDRIYVP 48 usage_00538.pdb 1 NLKQITVWARGVVM-NKDARDIVVALTEAAAKEGKYVQAWEN-------YVDLPDRIYVP 52 kqItvwaRg m dArdivv LtEAA KYVQAwen usage_00143.pdb 43 PRAFNRIG- 50 usage_00402.pdb 51 VRAYARISS 59 usage_00537.pdb 49 VRAYARISS 57 usage_00538.pdb 53 VRAYARISS 61 vRAyaRIs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################