################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:23 2021 # Report_file: c_0608_71.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00132.pdb # 2: usage_00133.pdb # 3: usage_00134.pdb # 4: usage_00281.pdb # 5: usage_00298.pdb # 6: usage_00302.pdb # 7: usage_00303.pdb # 8: usage_00451.pdb # 9: usage_00508.pdb # 10: usage_00563.pdb # # Length: 108 # Identity: 26/108 ( 24.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/108 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/108 ( 2.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 YWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFV 60 usage_00133.pdb 1 YWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFV 60 usage_00134.pdb 1 YWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFV 60 usage_00281.pdb 1 -YKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSV 59 usage_00298.pdb 1 -YKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSV 59 usage_00302.pdb 1 RTAEDIALLKSLGAKSYRFSISWSRIIPKGGRDDPVNQLGIDHYAQFVDDLLEAGITPFI 60 usage_00303.pdb 1 RTAEDIALLKSLGAKSYRFSISWSRIIPKGGRDDPVNQLGIDHYAQFVDDLLEAGITPFI 60 usage_00451.pdb 1 -YKEDVNIMKNMGFDAYRFSISWSRIFPNGT-G-MVNQEGVDYYNRLIDYMVKKGIKPYA 57 usage_00508.pdb 1 -YKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFI 59 usage_00563.pdb 1 -FEEDIQLMADMGMDAYRFSIAWSRIYPNGV-G-QVNQAGIDHYNKLIDALLAKGIQPYV 57 D YRFSI WsR P G VN G Y l Gi P usage_00132.pdb 61 TLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTI 108 usage_00133.pdb 61 TLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTI 108 usage_00134.pdb 61 TLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTI 108 usage_00281.pdb 60 TLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTF 107 usage_00298.pdb 60 TLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTF 107 usage_00302.pdb 61 TLFHWDLPEELHQRYGGLLNRTEFPLDFENYARVMFKALPKVRNWITF 108 usage_00303.pdb 61 TLFHWDLPEELHQRYGGLLNRTEFPLDFENYARVMFKALPKVRNWITF 108 usage_00451.pdb 58 NLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTF 105 usage_00508.pdb 60 TLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITF 107 usage_00563.pdb 58 TLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITL 105 tL HwDlP L Y G L W T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################