################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:33 2021 # Report_file: c_0875_141.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00522.pdb # 2: usage_00524.pdb # 3: usage_00694.pdb # 4: usage_00855.pdb # 5: usage_01032.pdb # # Length: 122 # Identity: 1/122 ( 0.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/122 ( 27.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/122 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00522.pdb 1 ---VPRIVQLLSKSH-NAHVRCGTAFALGIACAGKGLQSAIDV---LDPLTKDP------ 47 usage_00524.pdb 1 ---VPRIVQLLSKSH-NAHVRCGTAFALGIACAGKGLQSAIDV---LDPLTKDP------ 47 usage_00694.pdb 1 ----IELVFNRLWFPLVRPGALAVLSHLL-SFQH-SPEAFHLIVPHVVNLVHSFKNDGLP 54 usage_00855.pdb 1 PEQCPSVVSLLSESY-NPHVRYGAAMALGICCAGTGNKEAINL---LEPMTNDP------ 50 usage_01032.pdb 1 -----------------PHVRYGAAMALGICCAGTGNKEAINL---LEPMTNDP------ 34 hvr g a aLg cag g ai l p t dp usage_00522.pdb 48 -VDFVRQAA-I-ALS-ILIQQTEKL-NPQVADINKNF----------------------- 79 usage_00524.pdb 48 -VDFVRQAA-I-ALS-ILIQQTEKL-NPQVADINKNFLSVIT------------------ 84 usage_00694.pdb 55 SSTAFLVQL-TELIH-CYHYSG---FPDLYEPILEAI----------------------- 86 usage_00855.pdb 51 -VNYVRQGALI-ASALIMIQQTEIT-CPKVNQFRQLYSKVIND----------------- 90 usage_01032.pdb 35 -VNYVRQGALI-ASALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGI 91 v vrq a i a i iqqt p v usage_00522.pdb -- usage_00524.pdb -- usage_00694.pdb -- usage_00855.pdb -- usage_01032.pdb 92 LD 93 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################