################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:13 2021 # Report_file: c_1139_19.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00264.pdb # 2: usage_00265.pdb # 3: usage_00266.pdb # 4: usage_00290.pdb # 5: usage_00291.pdb # 6: usage_00292.pdb # # Length: 88 # Identity: 29/ 88 ( 33.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 88 ( 33.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 88 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00264.pdb 1 -------WVDQLTQEFCERMRVQA-GAPVTIQKEFSLLTCSIICYLTFGNKED------T 46 usage_00265.pdb 1 ---SMEPWVDQLTQEFCERMRVQA-GAPVTIQKEFSLLTCSIICYLTFGNKED------T 50 usage_00266.pdb 1 ----MEPWVDQLTQEFCERMRVQA-GAPVTIQKEFSLLTCSIICYLTFGNKED------T 49 usage_00290.pdb 1 IRDSMEPVVEQLTQEFCERMRAQPGTPVAIEEEFSLLTCSIICYLTFG-----DKIKDDN 55 usage_00291.pdb 1 ---SMEPVVEQLTQEFCERMRAQPGTPVAIEEEFSLLTCSIICYLTFG-----DKIKDDN 52 usage_00292.pdb 1 ------PVVEQLTQEFCERMRAQPGTPVAIEEEFSLLTCSIICYLTFG-----DKIKDDN 49 V QLTQEFCERMR Q L I usage_00264.pdb 47 LVHAFHDCVQDLMKTWDHWSIQILDMV- 73 usage_00265.pdb 51 LVHAFHDCVQDLMKTWDHWSIQILDMVP 78 usage_00266.pdb 50 LVHAFHDCVQDLMKTWDHWSIQILDMVP 77 usage_00290.pdb 56 LMPAYYKCIQEVLKTWSHWSIQIVDVIP 83 usage_00291.pdb 53 LMPAYYKCIQEVLKTWSHWSIQIVDVIP 80 usage_00292.pdb 50 LMPAYYKCIQEVLKTWSHWSIQIVDVIP 77 L A C Q KTW HWSIQI D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################