################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:09 2021 # Report_file: c_0212_15.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00067.pdb # 4: usage_00161.pdb # 5: usage_00268.pdb # 6: usage_00308.pdb # 7: usage_00322.pdb # 8: usage_00331.pdb # 9: usage_00332.pdb # 10: usage_00333.pdb # 11: usage_00391.pdb # 12: usage_00397.pdb # # Length: 109 # Identity: 48/109 ( 44.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/109 ( 63.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/109 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 -QLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTD 59 usage_00063.pdb 1 -QLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTD 59 usage_00067.pdb 1 -QLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTD 59 usage_00161.pdb 1 -QLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTD 59 usage_00268.pdb 1 -QLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTD 59 usage_00308.pdb 1 -QLVESGGGLVKPGGSLRLSCAASGFTFSNAWMNWVRQAPGKGLEWVGRVKSKTDGGAAD 59 usage_00322.pdb 1 -QLVESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATA 59 usage_00331.pdb 1 VQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTD 60 usage_00332.pdb 1 VQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTD 60 usage_00333.pdb 1 VQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTD 60 usage_00391.pdb 1 VRLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVD 60 usage_00397.pdb 1 VQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVD 60 qLVESGGGLVkPGGSLrL C ASGF f w WVRQ pGKGLEWVGRi g d usage_00062.pdb 60 YAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIM-IRGV 107 usage_00063.pdb 60 YAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIM-IRGV 107 usage_00067.pdb 60 YAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIM-IRGV 107 usage_00161.pdb 60 YAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIM-IRGV 107 usage_00268.pdb 60 YAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIM-IRGV 107 usage_00308.pdb 60 YAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDQLGYD---- 104 usage_00322.pdb 60 YAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVI---------- 98 usage_00331.pdb 61 YAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCARTGKY------ 103 usage_00332.pdb 61 YAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCARTGK------- 102 usage_00333.pdb 61 YAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCARTGKY------ 103 usage_00391.pdb 61 YAESVKGRFTISRDNTKNTLYLEMNNVRTEDTGYYFCARTGKYY-D--- 105 usage_00397.pdb 61 YAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGKYY-D--- 105 YAa v GRfTISRd skNtlyL MN l eDt Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################