################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:30 2021 # Report_file: c_0545_31.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00237.pdb # 2: usage_00238.pdb # 3: usage_00367.pdb # 4: usage_00368.pdb # 5: usage_00424.pdb # 6: usage_00425.pdb # 7: usage_00890.pdb # 8: usage_00891.pdb # 9: usage_00944.pdb # 10: usage_00945.pdb # # Length: 118 # Identity: 96/118 ( 81.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/118 ( 82.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/118 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00237.pdb 1 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 60 usage_00238.pdb 1 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 60 usage_00367.pdb 1 ------MLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 54 usage_00368.pdb 1 ------MLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 54 usage_00424.pdb 1 ---AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 57 usage_00425.pdb 1 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 60 usage_00890.pdb 1 -----LMLADAELG--DTTAGEMAVQ-R------P-EAVARLGRVRWTQQRHAEAAVLLQ 45 usage_00891.pdb 1 ----WLMLADAELG-----AGEMAVQRGL-----P-EAVARLGRVRWTQQRHAEAAVLLQ 45 usage_00944.pdb 1 --VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 58 usage_00945.pdb 1 ------MLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 54 MLADAELG AGEMAVQ g EAVARLGRVRWTQQRHAEAAVLLQ usage_00237.pdb 61 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC 118 usage_00238.pdb 61 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 117 usage_00367.pdb 55 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC 112 usage_00368.pdb 55 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC 112 usage_00424.pdb 58 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 114 usage_00425.pdb 61 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 117 usage_00890.pdb 46 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 102 usage_00891.pdb 46 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 102 usage_00944.pdb 59 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 115 usage_00945.pdb 55 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL- 111 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################