################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:44 2021 # Report_file: c_1087_19.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00209.pdb # 2: usage_00220.pdb # 3: usage_00221.pdb # 4: usage_00330.pdb # 5: usage_00331.pdb # # Length: 89 # Identity: 38/ 89 ( 42.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 89 ( 42.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 89 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00209.pdb 1 TLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKCQLLFAL 60 usage_00220.pdb 1 KLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFL-NNFIGNSKSQLLYAL 59 usage_00221.pdb 1 KLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFL-NNFIGNSKSQLLYAL 59 usage_00330.pdb 1 TLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKYQLLFAL 60 usage_00331.pdb 1 TLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKYQLLFAL 60 LE E AV DHGLEV GL RVPLYT DRVGG P FL N F K QLL AL usage_00209.pdb 61 KVLNMMPEEKLVEALAAATEKQKKALEKL 89 usage_00220.pdb 60 RSLKLLREDQIQEVLKASH---------- 78 usage_00221.pdb 60 RSLKLLREDQIQEVLKASH---------- 78 usage_00330.pdb 61 KVLNMMPSEKLAEALASATEKQKKALE-- 87 usage_00331.pdb 61 KVLNMMPSEKLAEALASATEKQKKALE-- 87 L E L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################