################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:16 2021 # Report_file: c_0435_58.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00267.pdb # 2: usage_00319.pdb # 3: usage_00358.pdb # 4: usage_00359.pdb # 5: usage_00360.pdb # 6: usage_00361.pdb # 7: usage_00584.pdb # 8: usage_00733.pdb # # Length: 119 # Identity: 22/119 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/119 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/119 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00267.pdb 1 ----QVRKVTGANTGKIFAMKVLKKAM-IVRNA------KDTAHTKAERNILEEV-KHPF 48 usage_00319.pdb 1 ----LVKKISGSDARQLYAMKVLKKAT-LK--V------RDRVRTKMERDILVEV-NHPF 46 usage_00358.pdb 1 ----QVRKVTGANTGKIFAMKVLKKAMK------------------AERNILEEV-KHPF 37 usage_00359.pdb 1 -KVFQVRKVTGANTGKIFAMKVLK----------------------AERNILEEV-KHPF 36 usage_00360.pdb 1 ----QVRKVTGANTGKIFAMKVLKK---------------------AERNILEEV-KHPF 34 usage_00361.pdb 1 GKVFLVKKISGSDARQLYAMKVLKKAT-LK--VRDRVRT------KMERDILVEV-NHPF 50 usage_00584.pdb 1 ----LVRHKS---TRKVYAMKLLSKFE-MIKRS----------FFWEERDIMAFA-NSPW 41 usage_00733.pdb 1 AKVLLVRLKK---TDRIYAMKVVKKEL-V--------------WVQTEKHVFEQASNHPF 42 V AMKvlk Er i hPf usage_00267.pdb 49 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 107 usage_00319.pdb 47 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 105 usage_00358.pdb 38 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 96 usage_00359.pdb 37 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 95 usage_00360.pdb 35 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 93 usage_00361.pdb 51 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 109 usage_00584.pdb 42 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHS-- 97 usage_00733.pdb 43 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 101 V L yaFQt Ly GG L E FY AE AL lH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################