################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:09 2021 # Report_file: c_1084_139.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00261.pdb # 2: usage_00262.pdb # 3: usage_00764.pdb # 4: usage_00822.pdb # 5: usage_00983.pdb # 6: usage_01172.pdb # 7: usage_01211.pdb # 8: usage_01217.pdb # 9: usage_01696.pdb # 10: usage_01852.pdb # # Length: 99 # Identity: 3/ 99 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 99 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 99 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 -LAQLGSVLDNINLMAYDYAGSW-D--------SV-SGHQTNLYPSTSN---PS--ST-- 42 usage_00262.pdb 1 -LAQLGSVLDNINLMAYDYAGSW-D--------SV-SGHQTNLYPSTSN---PS--ST-- 42 usage_00764.pdb 1 -VPELCQELDAIHVMSYDLRGNW-A--------GF-ADVHSPLYKRPHDQW-AY--EK-- 44 usage_00822.pdb 1 DIPALNGLVDFVNLATFDFLTPARN------P-EE-ADYSAPIYHPDGS---KDRLAH-- 47 usage_00983.pdb 1 AYNVAQNSMDHIFLMSYDFYGAF-D--------LKNLGHQTALNAPAWK---PD--TA-- 44 usage_01172.pdb 1 NYAEAQKSLGKIFLMSYDFKGAW-S--------NTDLGYQTTVYAPSWN---SE--EL-- 44 usage_01211.pdb 1 PVSAVASSLDWVNLMAYDFYGPG-W------S-RV-TGPPAALFDP-SN----------- 39 usage_01217.pdb 1 -YADAVQYMDYIFAMTYDFYGGW-N--------NV-PGHQTALYCGSFMRPGQC--DGGG 47 usage_01696.pdb 1 -LAEMDKYLDFWNLMAYDFSGSW-D--------KV-SGHMSNVFPSTTK---PE--ST-- 42 usage_01852.pdb 1 --KALGAAVDYFQV-TYDQVGPG-WSSGGFHNEAW-PGPESGFD---------------- 39 d yD g usage_00261.pdb 43 -----------PFSTKAAVDAYIAAGVPASKIILGMPIY 70 usage_00262.pdb 43 -----------PFSTKAAVDAYIAAGVPASKIILGMPIY 70 usage_00764.pdb 45 ------------LNVNDGLQLWEDKGCPTNKLVVGIP-- 69 usage_00822.pdb 48 ------------LNADFQVEYWLSQGFPSNKINLGVAT- 73 usage_00983.pdb 45 ------------YTTVNGVNALLAQGVKPGKIVVGTA-- 69 usage_01172.pdb 45 ------------YTTHYAVDALLKQGVDPNKIIVGVA-- 69 usage_01211.pdb 40 ----------AGPSGDAGTRSWIQAGLPAKKAVLGFP-- 66 usage_01217.pdb 48 VDENGEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAM- 85 usage_01696.pdb 43 -----------PFSSDKAVKDYIKAGVPANKIVLGMPLY 70 usage_01852.pdb 40 -------------WQQALLSYAVS-RVPASKVLAGLP-- 62 g K G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################