################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:16 2021 # Report_file: c_0677_74.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00117.pdb # 4: usage_00120.pdb # 5: usage_00121.pdb # 6: usage_01104.pdb # 7: usage_01286.pdb # 8: usage_01335.pdb # # Length: 70 # Identity: 49/ 70 ( 70.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 70 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 70 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 usage_00052.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 usage_00117.pdb 1 EHQLLAEEKSN-AM--EINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 57 usage_00120.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 usage_00121.pdb 1 EHQLLAEEKSNAMITNEINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 60 usage_01104.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 usage_01286.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 usage_01335.pdb 1 -------------------HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY 41 HLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDY usage_00051.pdb 42 PHKKLYKA-- 49 usage_00052.pdb 42 PHKKLYKA-- 49 usage_00117.pdb 58 PHKKLYKAIR 67 usage_00120.pdb 42 PHKKLYKAIR 51 usage_00121.pdb 61 PHKKLYKAIR 70 usage_01104.pdb 42 PHKKLYKAIR 51 usage_01286.pdb 42 PHKKLYKA-- 49 usage_01335.pdb 42 PHKKLYKAIR 51 PHKKLYKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################