################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:29 2021 # Report_file: c_0306_9.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00034.pdb # 7: usage_00035.pdb # 8: usage_00115.pdb # 9: usage_00121.pdb # 10: usage_00122.pdb # 11: usage_00149.pdb # 12: usage_00150.pdb # 13: usage_00172.pdb # # Length: 91 # Identity: 37/ 91 ( 40.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 91 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 91 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -AIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFF 59 usage_00029.pdb 1 -ATERTLSIIKPDAVAKNVIGEIESRFEKAGLKIVAAKMLQLSQEQAEGFYAEHKERPFF 59 usage_00030.pdb 1 ---ERTLSIIKPDAVAKNVIGEIESRFEKAGLKIVAAKMLQLSQEQAEGFYAEHKERPFF 57 usage_00032.pdb 1 -AIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF 59 usage_00033.pdb 1 -AIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF 59 usage_00034.pdb 1 -AIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF 59 usage_00035.pdb 1 -AIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF 59 usage_00115.pdb 1 MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFF 60 usage_00121.pdb 1 -----TLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFF 55 usage_00122.pdb 1 ---EKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFF 57 usage_00149.pdb 1 -ATERTLSIIKPDAVAKNVIGEIESRFEKAGLKIVAAKMLQLSQEQAEGFYAEHKERPFF 59 usage_00150.pdb 1 -ATERTLSIIKPDAVAKNVIGEIESRFEKAGLKIVAAKMLQLSQEQAEGFYAEHKE--FF 57 usage_00172.pdb 1 -ALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFF 59 T SI KP AV K IG I RFE G I k L A FYA H FF usage_00001.pdb 60 GDLVAFMTSGPVVVSVLEGENAVLAHREIL- 89 usage_00029.pdb 60 GDLVGFMTSGPVVVQVLEGENAIAANRDLMG 90 usage_00030.pdb 58 GDLVGFMTSGPVVVQVLEGENAIAANRDLMG 88 usage_00032.pdb 60 DGLVEFMTSGPIVVSVLEGENAVQRHRDLLG 90 usage_00033.pdb 60 DGLVEFMTSGPIVVSVLEGENAVQRHRDLLG 90 usage_00034.pdb 60 DGLVEFMTSGPIVVSVLEGENAVQRHRDLLG 90 usage_00035.pdb 60 DGLVEFMTSGPIVVSVLEGENAVQRHRDLLG 90 usage_00115.pdb 61 GDLVAFMTSGPVVVSVLEGENAVLAHREILG 91 usage_00121.pdb 56 KDLVEFMISGPVVVSILEGEGAVLKNRDLMG 86 usage_00122.pdb 58 KDLVEFMISGPVVVSILEGEGAVLKNRDLMG 88 usage_00149.pdb 60 GDLVGFMTSGPVVVQVLEGENAIAANRDLMG 90 usage_00150.pdb 58 GDLVGFMTSGPVVVQVLEGENAIAANRDLMG 88 usage_00172.pdb 60 KDLVEFMISGPVMIQVLEGEDAILKNRDLM- 89 LV FM SGP vv LEGE A R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################