################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:21:48 2021 # Report_file: c_0376_3.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00001.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00013.pdb # 9: usage_00021.pdb # 10: usage_00022.pdb # 11: usage_00023.pdb # 12: usage_00024.pdb # 13: usage_00025.pdb # 14: usage_00026.pdb # 15: usage_00027.pdb # 16: usage_00028.pdb # 17: usage_00029.pdb # 18: usage_00030.pdb # 19: usage_00032.pdb # 20: usage_00045.pdb # 21: usage_00059.pdb # 22: usage_00060.pdb # 23: usage_00062.pdb # 24: usage_00071.pdb # 25: usage_00072.pdb # 26: usage_00073.pdb # 27: usage_00074.pdb # 28: usage_00075.pdb # 29: usage_00085.pdb # 30: usage_00086.pdb # 31: usage_00103.pdb # 32: usage_00105.pdb # # Length: 209 # Identity: 15/209 ( 7.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/209 ( 34.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 91/209 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSD--------VI-- 28 usage_00005.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS---------------------------- 23 usage_00006.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSD---------I-- 29 usage_00009.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 25 usage_00010.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------VI- 28 usage_00011.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------I-- 27 usage_00012.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 25 usage_00013.pdb 1 ----DTRALVADFVGYKLRQKGY-----VCGA-----GPGEGPAA--------------- 31 usage_00021.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 26 usage_00022.pdb 1 HMSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 28 usage_00023.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 25 usage_00024.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSDSSLDARE-VI-- 35 usage_00025.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSDSSLDARE-VI-- 36 usage_00026.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSDSSLDARE-VI-- 35 usage_00027.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FSDSSLDARE-VI-- 36 usage_00028.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 25 usage_00029.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------I-- 27 usage_00030.pdb 1 HMSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------FS------------- 29 usage_00032.pdb 1 -----IEGFVVDYFTHRIRQNGEWFGAPG-LP-----C-------G-----------VQ- 30 usage_00045.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q---------------------F 25 usage_00059.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q---------------------F 24 usage_00060.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-AGGGG--G---------------------G 28 usage_00062.pdb 1 -MSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------I-- 28 usage_00071.pdb 1 --SQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F------------I- 27 usage_00072.pdb 1 -MSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------VI- 29 usage_00073.pdb 1 -MSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------------------VI- 28 usage_00074.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-----------VI- 27 usage_00075.pdb 1 -MSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q---------------------- 26 usage_00085.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q---------------------F 24 usage_00086.pdb 1 ----SNRELVVDFLSYKLSQKGY-----S-WS-----Q---------------------F 24 usage_00103.pdb 1 -MSQSNRELVVDFLSYKLSQKGY-----S-WS-----Q-------F-------------- 27 usage_00105.pdb 1 ---QSNRELVVDFLSYKLSQKGY-----S-WS---GH-----------SSSLDAREVI-- 35 r lVvDf ykl QkGy usage_00001.pdb 29 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 70 usage_00005.pdb 24 --------------ESEAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 65 usage_00006.pdb 30 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 71 usage_00009.pdb 26 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 67 usage_00010.pdb 29 --------------PMAAV-KQALRLAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 70 usage_00011.pdb 28 --------------PMAAV-KQALREAGDEWELRYRRAFSDLTSQLH---ITPGTAYQSF 69 usage_00012.pdb 26 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 67 usage_00013.pdb 32 ----------------DPL-HQAMRAAGDEFETRFRRTFSDLAAQLH---VTPGSAQQRF 71 usage_00021.pdb 27 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 68 usage_00022.pdb 29 --------------PMAAV-KQALREAGDEFELRARRAFSDLTSQLH---ITPGTAYQSF 70 usage_00023.pdb 26 --------------PMAAV-KQALREAGDEFELRYRRAASDLTSQLH---ITPGTAYQSF 67 usage_00024.pdb 36 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 77 usage_00025.pdb 37 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 78 usage_00026.pdb 36 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 77 usage_00027.pdb 37 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 78 usage_00028.pdb 26 --------------PMAAV-KQALREAGDEFELRYRRAASDLTSQLH---ITPGTAYQSF 67 usage_00029.pdb 28 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 69 usage_00030.pdb 30 --------------PMAAV-KQALREAGDEFELRARRAFSDLTSQLH---ITPGTAYQSF 71 usage_00032.pdb 31 ---------------PEHER------VGTIFEKKHAENFETFCEQLLAVP---RISFSPY 66 usage_00045.pdb 26 SDVEENRTEAPEGTESEAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 81 usage_00059.pdb 25 SD-------------SEAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 67 usage_00060.pdb 29 GG-------------MAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 71 usage_00062.pdb 29 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 70 usage_00071.pdb 28 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 69 usage_00072.pdb 30 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 71 usage_00073.pdb 29 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 70 usage_00074.pdb 28 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 69 usage_00075.pdb 27 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 68 usage_00085.pdb 25 S-------------ESEAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 67 usage_00086.pdb 25 SD------------ESEAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 68 usage_00103.pdb 28 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 69 usage_00105.pdb 36 --------------PMAAV-KQALREAGDEFELRYRRAFSDLTSQLH---ITPGTAYQSF 77 aGdefE r rr sdl QLh g a q f usage_00001.pdb 71 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 122 usage_00005.pdb 66 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 117 usage_00006.pdb 72 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 123 usage_00009.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 119 usage_00010.pdb 71 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 122 usage_00011.pdb 70 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 121 usage_00012.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSLGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 119 usage_00013.pdb 72 TQVSDELFQ-G---GPNWGRLVAFFVFGAALCAE-SVNKEMEVL---VGQVQEWMVAYLE 123 usage_00021.pdb 69 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 120 usage_00022.pdb 71 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 122 usage_00023.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 119 usage_00024.pdb 78 EQVVNELFR-D---GVNWGAIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 129 usage_00025.pdb 79 EQVVNELFR-D---GVNWGAIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 130 usage_00026.pdb 78 EQVVNELFR-D---GVNWGAIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 129 usage_00027.pdb 79 EQVVNELFR-D---GVNWGAIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 130 usage_00028.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 119 usage_00029.pdb 70 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 121 usage_00030.pdb 72 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 123 usage_00032.pdb 67 QDVVRTVGNAQTDQCPSYGRLIGLISFGGFVAAKE-----SVELQGQVRNLFVYTSLFIK 121 usage_00045.pdb 82 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 133 usage_00059.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 119 usage_00060.pdb 72 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 123 usage_00062.pdb 71 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 122 usage_00071.pdb 70 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 121 usage_00072.pdb 72 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 123 usage_00073.pdb 71 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 122 usage_00074.pdb 70 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 121 usage_00075.pdb 69 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 120 usage_00085.pdb 68 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 119 usage_00086.pdb 69 EQVVNELFR-D---GVNWGRIVAFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 120 usage_00103.pdb 70 EQVVNELFR-D---GVNWGRIVLFFSFGGALCVE-SVDKEMQVL---VSRIAAWMATYLN 121 usage_00105.pdb 78 EQVVNELFR-D---GVNWGAIVAFFSFGGALCVE-SVDKEMQVL---VSRIASWMATYLN 129 qVv elf g nwG v ffsfGgalc e m vL V wm yl usage_00001.pdb 123 DHLEPWIQENGG-WDTFVDL--------- 141 usage_00005.pdb 118 DHLEPWIQENGG-WDTFVEL--------- 136 usage_00006.pdb 124 DHLEPWIQENGG-WDTFVDL--------- 142 usage_00009.pdb 120 DHLEPWIQENGG-WDTFVEL--------- 138 usage_00010.pdb 123 DHLEPWIQENGG-WDTFVEL--------- 141 usage_00011.pdb 122 DHLEPWIQENGG-WDTFVEL--------- 140 usage_00012.pdb 120 DHLEPWIQENGG-WDTFVEL--------- 138 usage_00013.pdb 124 TRLADWIHSSGG-WAEFTAL--------- 142 usage_00021.pdb 121 DHLEPWIQENGG-WDTFVDL--------- 139 usage_00022.pdb 123 DHLEPWIQENGG-WDTFVDLY-------- 142 usage_00023.pdb 120 DHLEPWIQENGG-WDTFVDL--------- 138 usage_00024.pdb 130 DHLEPWIQENGG-WDTFVDL--------- 148 usage_00025.pdb 131 DHLEPWIQENGG-WDTFVDL--------- 149 usage_00026.pdb 130 DHLEPWIQENGG-WDTFVDLY-------- 149 usage_00027.pdb 131 DHLEPWIQENGG-WDTFVDLY-------- 150 usage_00028.pdb 120 DHLEPWIQENGG-WDTFVDL--------- 138 usage_00029.pdb 122 DHLEPWIQENGG-WDTFVDL--------- 140 usage_00030.pdb 124 DHLEPWIQENGG-WDTFVDL--------- 142 usage_00032.pdb 122 TRIRNNWKEHNRSWDDFTLGK-QKEDYER 149 usage_00045.pdb 134 DHLEPWIQENGG-WDTFVELY-------- 153 usage_00059.pdb 120 DHLEPWIQENGG-WDTFVEL--------- 138 usage_00060.pdb 124 DHLEPWIQENGG-WDTFVEL--------- 142 usage_00062.pdb 123 DHLEPWIQENGG-WDTFVEL--------- 141 usage_00071.pdb 122 DHLEPWIQENGG-WDTFVDLYGN------ 143 usage_00072.pdb 124 DHLEPWIQENGG-WDTFVDLYG------- 144 usage_00073.pdb 123 DHLEPWIQENGG-WDTFVDLYG------- 143 usage_00074.pdb 122 DHLEPWIQENGG-WDTFVDLYGN------ 143 usage_00075.pdb 121 DHLEPWIQENGG-WDTFVDLY-------- 140 usage_00085.pdb 120 DHLEPWIQENGG-WDTFVEL--------- 138 usage_00086.pdb 121 DHLEPWIQENGG-WDTFVELY-------- 140 usage_00103.pdb 122 DHLEPWIQENGG-WDTFVEL--------- 140 usage_00105.pdb 130 DHLEPWIQENGG-WDTFVDL--------- 148 l wi e gg Wd F l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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