################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:44 2021 # Report_file: c_0892_8.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00017.pdb # 2: usage_00026.pdb # 3: usage_00030.pdb # 4: usage_00099.pdb # 5: usage_00122.pdb # 6: usage_00123.pdb # 7: usage_00124.pdb # 8: usage_00146.pdb # # Length: 97 # Identity: 4/ 97 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 97 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 97 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 --SPEELKGIFEKYAAKEG-D-PNQLSKEELKLLLQTE---F-PSLLK-G--GS-----T 44 usage_00026.pdb 1 --SADDIKKAFFVIDQ-DK----SGFI---EEDELKLFLQVFSAGAR-------ALTDAE 43 usage_00030.pdb 1 --SPEELKGIFEKYAAKEG-D-PNQLSKEELKLLLQTE---F-PSLLK-G--GS-----T 44 usage_00099.pdb 1 --SEEELSDLFRMFDK-NA---DGYIDLDELKIMLQAT---G-ET----------ITEDD 40 usage_00122.pdb 1 --SPEELKGIFEKYAAKEG-D-PNQLSKEELKLLLQTE---F-PSLLK-G--MS-----T 44 usage_00123.pdb 1 --SPEELKGIFEKYAAKEG-D-PNQLSKEELKLLLQTE---F-PSLLK-G--MS-----T 44 usage_00124.pdb 1 NPEVEAKLDVARRLFKRYDKDGSGQLQDDEIAGLLKDT---Y--AEMGMSNFTP------ 49 usage_00146.pdb 1 --SPEELKGIFEKYAAKEG-D-PNQLSKEELKLLLQTE---F-PSLLK-G--MS-----T 44 s e f L usage_00017.pdb 45 LDELFEELDK----NGDGEVSFEEFQVLVKKISQ--- 74 usage_00026.pdb 44 TKAFLKAGDS----DGDGAIGVDEWAALVK------- 69 usage_00030.pdb 45 LDELFEELDK----NGDGEVSFEEFQVLVKKISQ--- 74 usage_00099.pdb 41 IEELMKDGDK----NNDGRIDYDEFLEFM-------- 65 usage_00122.pdb 45 LDELFEELDK----NGDGEVSFEEFQVLVKKISQ--- 74 usage_00123.pdb 45 LDELFEELDK----NGDGEVSFEEFQVLVKKISQ--- 74 usage_00124.pdb 50 TKEDVKIWLQMADTNSDGSVSLEEYEDLIIKSLQKAG 86 usage_00146.pdb 45 LDELFEELDK----NGDGEVSFEEFQVLVKKIS---- 73 e d n DG E l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################