################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:39 2021 # Report_file: c_0398_83.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00699.pdb # # Length: 205 # Identity: 4/205 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/205 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 124/205 ( 60.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --------------SNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGSIFLANSVQ 46 usage_00008.pdb 1 --------------------GRYA-ITDNLSASLYGAELE-------------------- 19 usage_00079.pdb 1 -------------KSADFIGGRYA-ITDNLSASLYGAELE-------------------- 26 usage_00080.pdb 1 DMTTEYGTRQVKGDRLNYLGGNYK-PLDGLEISLYGSHFQ-------------------- 39 usage_00699.pdb 1 -------------KSADFIGGRYA-ITDNLSASLYGAELE-------------------- 26 g ya D l sLyg usage_00007.pdb 47 YSDFNGPG-EKSWQARYDLNLA-SYGVPGLTFVRYINGKD-IDGTKSDNNVGYKNYGYGE 103 usage_00008.pdb 20 -------DIYRQYYLNSNYTIPLASDQSL--GFDFNIYRTND-GK--------------- 54 usage_00079.pdb 27 -------DIYRQYYLNSNYTIPLASDQSL--GFDFNIYRTNDEGK--------------- 62 usage_00080.pdb 40 -------DVWNQYYLGVTHDIGLENGIAL--RTAFNGYHTGDTGA--------------- 75 usage_00699.pdb 27 -------DIYRQYYLNSNYTIPLASDQSL--GFDFNIYRTNDEGK--------------- 62 d qyyl i l fn y t d G usage_00007.pdb 104 D---GKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRAN----------------ADQG-- 142 usage_00008.pdb 55 -AKAGDISNTTWSLAAAYTL---DAHTFTLAYQKVHGDQPFDYIGFG--RGGDSIFLANS 108 usage_00079.pdb 63 -AKAGDISNTTWSLAAAYTL---DAHTFTLAYQKVHGDQPFDYIGFGGA-GGDSIFLANS 117 usage_00080.pdb 76 -REAGYIDNDTWSLAFTLGH---RAHALTLAYQQVDG----------------------- 108 usage_00699.pdb 63 -AKAGDISNTTWSLAVAYTL---DAHTFTLAYQKVHGDQPFDRIGF--------IFLANS 110 G i nttwsla ah ftlayq v g usage_00007.pdb 143 -------EGDQNEFRLIVDYPLSIL 160 usage_00008.pdb 109 VQYSDFNGPGEKSWQARYDLN---- 129 usage_00079.pdb 118 VQYSDFNGPGEKSWQARYDLNL--- 139 usage_00080.pdb ------------------------- usage_00699.pdb 111 VQYSHFNGPGEKSWQARYDLNL--- 132 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################