################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:47 2021 # Report_file: c_0935_16.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00195.pdb # 2: usage_00196.pdb # 3: usage_00263.pdb # 4: usage_01338.pdb # 5: usage_01339.pdb # 6: usage_01340.pdb # 7: usage_01341.pdb # 8: usage_01342.pdb # 9: usage_01343.pdb # 10: usage_01344.pdb # 11: usage_01345.pdb # 12: usage_01346.pdb # 13: usage_01347.pdb # # Length: 46 # Identity: 5/ 46 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 46 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 46 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00195.pdb 1 ELWLYTELKT------RTSSITLAIRMDNLYLVGFRTPGGVWWE-F 39 usage_00196.pdb 1 -LWLYTELKT------RTSSITLAIRMDNLYLVGFRTPGGVWWE-F 38 usage_00263.pdb 1 -NLFAVDVRGIDPEEGRFNNLRLIVERNNLYVTGFVNRTNNVFYRF 45 usage_01338.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01339.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01340.pdb 1 -RWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 40 usage_01341.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01342.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01343.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01344.pdb 1 -RWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 40 usage_01345.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01346.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 usage_01347.pdb 1 SRWFHVVLKA-SP---TSAGLTLAIRADNIYLEGFKSSDGTWWE-L 41 w lk tLair dN Yl GF g wwe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################