################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:22 2021 # Report_file: c_1237_12.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00118.pdb # 2: usage_00233.pdb # 3: usage_00234.pdb # 4: usage_00235.pdb # 5: usage_00236.pdb # 6: usage_00237.pdb # 7: usage_00394.pdb # 8: usage_00408.pdb # 9: usage_00826.pdb # # Length: 42 # Identity: 1/ 42 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 42 ( 59.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 42 ( 40.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 32 usage_00233.pdb 1 QPG-WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 35 usage_00234.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 32 usage_00235.pdb 1 QPG-WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 35 usage_00236.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 32 usage_00237.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 32 usage_00394.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMID 33 usage_00408.pdb 1 ---RQCQCTSV--GAQNTVICSKLAAKCLVMKAEMQ------ 31 usage_00826.pdb 1 ----WMLKCKGWETDADSYV--YFTIA---ANMWPQICDMI- 32 wmlkckg tdadsyv yftia anmwpQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################