################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:09 2021 # Report_file: c_1387_183.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00435.pdb # 2: usage_00637.pdb # 3: usage_00682.pdb # 4: usage_00885.pdb # 5: usage_01082.pdb # 6: usage_01424.pdb # 7: usage_01608.pdb # 8: usage_01618.pdb # 9: usage_01619.pdb # 10: usage_01879.pdb # 11: usage_02320.pdb # # Length: 69 # Identity: 5/ 69 ( 7.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 69 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 69 ( 31.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00435.pdb 1 --------RPRAQEILDGLVDGILAEG--PPADLVERVLEPFPIAVVSEVMGVPAADRER 50 usage_00637.pdb 1 TARRMGAMQSWLEELFAGLLDGVERTG--HPADIVRDLAQPFTIAVICRLLGVPYEDR-- 56 usage_00682.pdb 1 --------RERSRGMLDELVDAMLRAG--PPADLTEAVLSPFPIAVICELMGVPATDRHS 50 usage_00885.pdb 1 --------EAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADH-- 50 usage_01082.pdb 1 --------RPRLEEIAEGLLDEMEKKG--APADIVESLAVPFPITVICELLGVPMVDV-- 48 usage_01424.pdb 1 --------RPRAQEILDGLVDGILAEG--PPADLVERVLEPFPIAVVSEVMGVPAADRER 50 usage_01608.pdb 1 -VKRMNAIRPRLQSLVDRLLDDMLAKG--PGADLVSAFALPVPSVAICELLGVPYGDH-- 55 usage_01618.pdb 1 ---------ERSRGMLDELVDAMLRAG--PPADLTEAVLSPFPIAVICELMGVPATDR-- 47 usage_01619.pdb 1 ---------ERSRGMLDELVDAMLRAG--PPADLTEAVLSPFPIAVICELMGVPATDR-- 47 usage_01879.pdb 1 --------RPEIEKIVDGILDRLLALE--PPVDILTHLALPMSTQVICHLLGVPYEDR-- 48 usage_02320.pdb 1 TARGVERVRERSRGMLDELVDAMLRAG--PPADLTEAVLSPFPIAVICELMGVPATDR-- 56 l d aD P GvP D usage_00435.pdb 51 VHSWTRQII 59 usage_00637.pdb --------- usage_00682.pdb 51 MHTWTQLIL 59 usage_00885.pdb --------- usage_01082.pdb --------- usage_01424.pdb 51 VHSWTR--- 56 usage_01608.pdb --------- usage_01618.pdb --------- usage_01619.pdb --------- usage_01879.pdb --------- usage_02320.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################