################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:13 2021 # Report_file: c_0109_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00034.pdb # 2: usage_00079.pdb # 3: usage_00084.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # # Length: 209 # Identity: 43/209 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/209 ( 41.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/209 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 ---------------TAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPG-N 44 usage_00079.pdb 1 HDFFQSRTTMMVSRTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQR-QEGT 59 usage_00084.pdb 1 HDFFEECSRNFV-----E-ADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQL-EEGD 53 usage_00106.pdb 1 REFFQERSELASRPN-DDRSMPALIELVEYLDGLVRTKTAHPDTGLLGTAVTERLLKG-E 58 usage_00107.pdb 1 REFFQERSELASRPN-DDRSMPALIELVEYLDGLVRTKTAHPDTGLLGTAVTERLLKG-E 58 A eL yl gLv k P L l usage_00034.pdb 45 VTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDELLRVL 104 usage_00079.pdb 60 LDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEELLRYF 119 usage_00084.pdb 54 LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSGVVEELLRFT 113 usage_00106.pdb 59 ITHQELVNNAVLLLAAGHETSANQVTLSVLTLLRHPETAAELREQPELMPNAVDELLRYH 118 usage_00107.pdb 59 ITHQELVNNAVLLLAAGHETSANQVTLSVLTLLRHPETAAELREQPELMPNAVDELLRYH 118 h lv a ll AGhET n L l Ll hPE l P p aV ELLR usage_00034.pdb 105 SVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTDNHHVAF 164 usage_00079.pdb 120 TIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGARHHLAF 179 usage_00084.pdb 114 SVSDH-IVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVGF 172 usage_00106.pdb 119 SIADG-LRRAATADIVLGDHTIRAGDGLIILLSSANHDGNTFGAEATFDIHRPARHHVAF 177 usage_00107.pdb 119 SIADG-LRRAATADIVLGDHTIRAGDGLIILLSSANHDGNTFGAEATFDIHRPARHHVAF 177 s aD R A Di g ti Agdg i aN D f D R arHHvaF usage_00034.pdb 165 GYGVHQCVGQHLARLELEVALETLLR--- 190 usage_00079.pdb 180 GFGPHQCLGQNLARMELQIVFDTLFRRI- 207 usage_00084.pdb 173 GHGIHQCLGQNLARAELEIALGGLFARI- 200 usage_00106.pdb 178 GYGPHQCLGQNLARLEMEVTLGKLFRR-- 204 usage_00107.pdb 178 GYGPHQCLGQNLARLEMEVTLGKLFRRVP 206 G G HQClGQnLAR E e l Lfr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################