################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:08 2021 # Report_file: c_0656_102.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00258.pdb # 2: usage_00266.pdb # 3: usage_00267.pdb # 4: usage_00268.pdb # 5: usage_00305.pdb # 6: usage_00306.pdb # 7: usage_00348.pdb # 8: usage_00520.pdb # 9: usage_00543.pdb # 10: usage_00719.pdb # 11: usage_00720.pdb # 12: usage_00721.pdb # 13: usage_00722.pdb # 14: usage_00827.pdb # 15: usage_00978.pdb # 16: usage_00979.pdb # 17: usage_00990.pdb # 18: usage_00991.pdb # 19: usage_00992.pdb # 20: usage_01062.pdb # 21: usage_01067.pdb # 22: usage_01126.pdb # 23: usage_01220.pdb # # Length: 48 # Identity: 15/ 48 ( 31.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 48 ( 47.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 48 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 -SGSKSGNTASLTVSGLQAEDEAEYYCSSYTDIHNFVFGGGTKLTV-- 45 usage_00266.pdb 1 -SGSKSGNTASLTVSGLQAEDEAEYYCSSYTDIHNFVFGGGTKLTV-- 45 usage_00267.pdb 1 -SGSKSGNTASLTVSGLQAEDEAEYYCSSYTDIHNFVFGGGTKLTV-- 45 usage_00268.pdb 1 -SGSKSGNTASLTVSGLQAEDEAEYYCSSYTDIHNFVFGGGTKLTV-- 45 usage_00305.pdb 1 -SGSKSGNTASLTISGLQAEDEAHYYCWSFAGSYYVFGTGTDVTV--- 44 usage_00306.pdb 1 -SGSKSGNTASLTISGLQAEDEAHYYCWSFAGSYYVFGTGTDVTV--- 44 usage_00348.pdb 1 FSGSNSGNTATLTISGTQAEDEADYYCSSYDDPNFQVFGGGTKLTV-- 46 usage_00520.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTV-- 45 usage_00543.pdb 1 FSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLVFGGGTKLTV-- 46 usage_00719.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTV-- 45 usage_00720.pdb 1 FSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVLG 48 usage_00721.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVLG 47 usage_00722.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTV-- 45 usage_00827.pdb 1 FSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVT--- 45 usage_00978.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVL- 46 usage_00979.pdb 1 -SGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVL- 46 usage_00990.pdb 1 -SGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTV-- 45 usage_00991.pdb 1 -SGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLT--- 44 usage_00992.pdb 1 -SGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTV-- 45 usage_01062.pdb 1 -SGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTWVFGGGTKLTV-- 45 usage_01067.pdb 1 -SASKSGNTASLTISGLQEEDEAHYYCYSYAD--GVAFGGGTKLTV-- 43 usage_01126.pdb 1 -SGSKSGNTASLTISGLQAEDEADYYCWSFAGSYYVFGTGTDVTV--- 44 usage_01220.pdb 1 -SGSKSGSTATLTITGVQADDEAVYFCGGRDSTYAGMFGAGTTLTV-- 45 SgSkSGnTA LT sG QaeDEA YyC s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################