################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:23 2021 # Report_file: c_1206_23.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00223.pdb # 2: usage_00309.pdb # 3: usage_00314.pdb # 4: usage_00391.pdb # 5: usage_00446.pdb # 6: usage_00455.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 39 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 39 ( 74.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 ------KVIAVDNQF-VNA----KGKPMDT--VPLVME- 25 usage_00309.pdb 1 ------PLKAEPGQVLI--RQGDPALTFLI--------- 22 usage_00314.pdb 1 -----RPLKAEPGQVLI--RQGDPALTFML--------I 24 usage_00391.pdb 1 PDLSGGPQTIARGGSGT-------------FT------- 19 usage_00446.pdb 1 ------PLKAEPGQVLI--RQGDPALTFML--------I 23 usage_00455.pdb 1 -----QPLRAAAGQVLL--RQGEPAVSFLL--------I 24 p a gq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################