################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:45 2021 # Report_file: c_1339_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00190.pdb # 2: usage_00191.pdb # 3: usage_00192.pdb # 4: usage_00193.pdb # 5: usage_00285.pdb # 6: usage_00306.pdb # 7: usage_00361.pdb # 8: usage_00362.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 45 ( 8.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 45 ( 68.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00190.pdb 1 --VKTK---QIWQGSD--LPTAPYRIITKE-TDLDSVIAELG--- 34 usage_00191.pdb 1 DKVKTK---QIWQGSD--LPTAPYRIITKE-TDLDSVIAE----- 34 usage_00192.pdb 1 ---KTK---QIWQGSD--LPTAPYRIITKE-TDLDSVIAEL---- 32 usage_00193.pdb 1 DKVKTK---QIWQGSD--LPTAPYRIITKE-TDLDSVIAEL---- 35 usage_00285.pdb 1 ------SKYANSLKTA-PLA---IVLLADEEKKI--------SEW 27 usage_00306.pdb 1 ----VT---KIWSKESNY-D-CKVISIVGG-HSLEEISFSL---- 31 usage_00361.pdb 1 DKVKTK---QIWQGSD--LPTAPYRIITKE-TDLDSVIAE----- 34 usage_00362.pdb 1 --VKTK---QIWQGSD--LPTAPYRIIT-----LDSVIAEL---- 29 iw i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################