################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:46 2021 # Report_file: c_0651_39.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00100.pdb # 4: usage_00101.pdb # 5: usage_00223.pdb # 6: usage_00249.pdb # 7: usage_00484.pdb # # Length: 106 # Identity: 16/106 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/106 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/106 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 HEMDIWEANSQAQSYTAHVCSV-DGYTPCTGTDCG---DNGDDRYKGVCDKDGCDYAAYR 56 usage_00029.pdb 1 HEMDIWEANSQAQSYTAHVCSV-DGYTPCTGTDCG---DNGDDRYKGVCDKDGCDYAAYR 56 usage_00100.pdb 1 NEMDILEGNSRANALTPHSCTAT------------------------ACDSAGCGFNPYG 36 usage_00101.pdb 1 NEMDILEGNSRANALTPHSCTAT------------------------ACDSAGCGFNPYG 36 usage_00223.pdb 1 NEMDVWEANINSAAVTPHVCNV-QGQTRCSGTQCG---D-GDERYDGICDKDGCDFNSFR 55 usage_00249.pdb 1 NEMDVWEANINSAAVTPHVCNV-QGQTRCSGTQCG---D-GDERYDGICDKDGCDFNSFR 55 usage_00484.pdb 1 ----VWESNAYAFAFTPHACTT-NEYHVCETTNCGGTYS--EDRFAGKCDANGCDYNPYR 53 E N T H C CD GC usage_00028.pdb 57 LGQHDFYGEGGTVDSGSTLTVITQFITGG----GGLNEIRRIYQQ- 97 usage_00029.pdb 57 LGQHDFYGEGGTVDSGSTLTVITQFITGG----GGLNEIRRIYQQ- 97 usage_00100.pdb 37 SGYKSYYGPGDTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQN 82 usage_00101.pdb 37 SGYKSYYGPGDTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQN 82 usage_00223.pdb 56 MGNQTFLGPGKTVNTNSKFTVVTQFLTSDNTTTGTLHEIRRLYVQ- 100 usage_00249.pdb 56 MGNQTFLGPGKTVNTNSKFTVVTQFLTSDNTTTGTLHEIRRLYVQ- 100 usage_00484.pdb 54 MGNPDFYGKGKTLDTSRKFTVVSRFE---------ENKLSQYFIQD 90 G G G Tv T tqF l i r y Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################