################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:09 2021 # Report_file: c_1245_17.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00026.pdb # 4: usage_00124.pdb # 5: usage_00135.pdb # 6: usage_00234.pdb # 7: usage_00243.pdb # 8: usage_00245.pdb # 9: usage_00246.pdb # 10: usage_00300.pdb # 11: usage_00446.pdb # 12: usage_00447.pdb # 13: usage_00488.pdb # 14: usage_00715.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 41 ( 58.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 Q------PREPQVYTL-PPSRDELT-K-NQVSLTCLVKG-- 30 usage_00008.pdb 1 Q------PREPQVYTL-PPSRDELT-K-NQVSLTCLVKG-- 30 usage_00026.pdb 1 Q------PREPQVYTL-PPSREEMT-K-NQVSLTCLVKG-- 30 usage_00124.pdb 1 -YNIRYA--DYDIQDRF--RGDWDK-DA--WSLTCKN---- 29 usage_00135.pdb 1 -------GVSAYLSRP-S--PFDLFIR---KSPTITCLVVD 28 usage_00234.pdb 1 Q------PREPQVYTL-PPSREEMT-K-NQVSLTCLVKG-- 30 usage_00243.pdb 1 Q------PREPQVYTL-PPSREEMT-K-NQVSLTCLVKG-- 30 usage_00245.pdb 1 -----------QVYTL-PPSREEMT-K-NQVSLTCLVK--- 24 usage_00246.pdb 1 -----------QVYTL-PPSREEMT-K-NQVSLTCLVK--- 24 usage_00300.pdb 1 -----------QVYVL-PPPEEEMT-K-KQVTLTCMVTD-- 25 usage_00446.pdb 1 Q------PREPQVSTL-PPSREEMT-K-NQVSLMCLVYG-- 30 usage_00447.pdb 1 Q------PREPQVYTL-PPSRKEMT-K-NQVSLTCLVKG-- 30 usage_00488.pdb 1 -------PREPQVYTL-PPSQEEMT-K-NQVSLTCLVKG-- 29 usage_00715.pdb 1 R------RVEPKVTVY-PARTQTLQ---HHNLLVCSVNG-- 29 l c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################