################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:19 2021 # Report_file: c_0937_96.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00228.pdb # 2: usage_00527.pdb # 3: usage_00528.pdb # 4: usage_00546.pdb # 5: usage_01120.pdb # 6: usage_01139.pdb # # Length: 53 # Identity: 1/ 53 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 53 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 53 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00228.pdb 1 --SYKVILGAHQEVNLEPHVQEIEVS-RLFLEPTR-----------KDIALLK 39 usage_00527.pdb 1 ---ITVTLGAHNITEEEDTWQKLEVI-KQFRHPKYNTST-----LHHDIMLLK 44 usage_00528.pdb 1 -RSITVTLGAHNITEEEDTWQKLEVI-KQFRHPKYNTST-----LHHDIMLLK 46 usage_00546.pdb 1 ---PTVVLGAHSLSKNEASKQTLEIK-KFIPFS-R----VTSDPQSNDIMLVK 44 usage_01120.pdb 1 TLVMAVYDF--DRF-----SKHDIIGEFKVPMNTVDFGH-------VTEEWRD 39 usage_01139.pdb 1 -RSITVTLGAHNITEEEDTWQKLEVI-KQFRHPKYNTST-----LHHDIMLLK 46 V lg q e di l k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################