################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:18 2021 # Report_file: c_1092_17.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00062.pdb # 2: usage_00063.pdb # 3: usage_00064.pdb # 4: usage_00098.pdb # 5: usage_00099.pdb # 6: usage_00100.pdb # 7: usage_00101.pdb # 8: usage_00102.pdb # 9: usage_00103.pdb # 10: usage_00104.pdb # 11: usage_00105.pdb # 12: usage_00106.pdb # 13: usage_00107.pdb # 14: usage_00108.pdb # # Length: 62 # Identity: 46/ 62 ( 74.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 62 ( 74.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 62 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00063.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00064.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00098.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGV-------ALKDIEIVRVNKNAPAVEL 53 usage_00099.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRT--NAPAVEL 58 usage_00100.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGV--------LKDIEIVRTNKNAPAVEL 52 usage_00101.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSL----------LKDIEIVR----APAVEL 46 usage_00102.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSL----------LKDIEIVR-T--APAVEL 47 usage_00103.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00104.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00105.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00106.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00107.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVNKNAPAVEL 60 usage_00108.pdb 1 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVK-----AALKDIEIVRVNKNAPAVEL 55 TPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSL LKDIEIVR APAVEL usage_00062.pdb -- usage_00063.pdb -- usage_00064.pdb -- usage_00098.pdb 54 HG 55 usage_00099.pdb -- usage_00100.pdb -- usage_00101.pdb 47 HG 48 usage_00102.pdb -- usage_00103.pdb -- usage_00104.pdb 61 HG 62 usage_00105.pdb 61 HG 62 usage_00106.pdb 61 HG 62 usage_00107.pdb -- usage_00108.pdb 56 HG 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################