################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:40 2021 # Report_file: c_0493_8.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00047.pdb # 3: usage_00048.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00054.pdb # 7: usage_00063.pdb # 8: usage_00179.pdb # 9: usage_00180.pdb # # Length: 86 # Identity: 27/ 86 ( 31.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 86 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 86 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -VQLRKKLELFTYVRFDSEYTILATASQPD--SAN-YSSNLVVQAMYVPPGAPNPKEWDD 56 usage_00047.pdb 1 -VQLRKKLELFTYVRFDSEYTILATASQPD--SAN-YSSNLVVQAMYVPPGAPNPKEWDD 56 usage_00048.pdb 1 MVQLRRKFELFTYMRFDMEITFVITSRQLPGTSIAQDMPPLTHQIMYIPPGGPVPNSVTD 60 usage_00050.pdb 1 LVQLRKKLELFTYVRFDSEYTILATASQPD--SAN-YSSNLVVQAMYVPPGAPNPKEWDD 57 usage_00051.pdb 1 LVQLRKKLELFTYVRFDSEYTILATASQPD--SAN-YSSNLVVQAMYVPPGAPNPKEWDD 57 usage_00054.pdb 1 -AQIRRKFELFTYVRFDSEITLVPCIAG----RGD-DIGHIVMQYMYVPPGAPIPSKRND 54 usage_00063.pdb 1 MVQLRRKFELFTYMRFDMEITFVITSRQLPGTSIAQDMPPLTHQIMYIPPGGPVPNSVTD 60 usage_00179.pdb 1 -VQLRKKLELFTYVRFDSEYTILATASQPE--ASS-YSSNLTVQAMYVPPGAPNPKEWDD 56 usage_00180.pdb 1 YAQMRRKVELFTYMRFDAEFTFVACTP--T--GE---VVPQLLQYMFVPPGAPKPDSRES 53 Q R K ELFTY RFD E T Q My PPG P P d usage_00001.pdb 57 YTWQSASNPSVFFKVGD-TSRFSVPY 81 usage_00047.pdb 57 YTWQSASNPSVFFKVGD-TSRFSVPY 81 usage_00048.pdb 61 FAWQTSTNPSIFWTEGNAPPRMSIP- 85 usage_00050.pdb 58 YTWQSASNPSVFFKVGD-TSRFSVPY 82 usage_00051.pdb 58 YTWQSASNPSVFFKVGD-TSRFSVPY 82 usage_00054.pdb 55 FSWQSGTNMSIFWQHGQPFPRFSIP- 79 usage_00063.pdb 61 FAWQTSTNPSIFWTEGNAPPRMSIP- 85 usage_00179.pdb 57 YTWQSASNPSVFFKVGE-TSRFSVPF 81 usage_00180.pdb 54 LAWQTATNPSVFVKLSDPPAQVSVP- 78 WQ NpS F g r S P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################