################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:10 2021 # Report_file: c_1087_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00035.pdb # 4: usage_00063.pdb # 5: usage_00334.pdb # 6: usage_00335.pdb # 7: usage_00347.pdb # # Length: 54 # Identity: 17/ 54 ( 31.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 54 ( 46.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 54 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 GYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLY--- 51 usage_00014.pdb 1 GYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNP 54 usage_00035.pdb 1 GYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVERGGSSTM----------- 43 usage_00063.pdb 1 GYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRP 54 usage_00334.pdb 1 DYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMY--- 51 usage_00335.pdb 1 DYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMY--- 51 usage_00347.pdb 1 -YVLETIKLLVNEQ-LNVPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMP 52 YV a r l g VPLIGF G PwTL tYMvEgG S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################