################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:41 2021 # Report_file: c_0050_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # # Length: 215 # Identity: 204/215 ( 94.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 204/215 ( 94.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/215 ( 5.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QLYKQIMVGVFERVYEVAPV----EYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT 56 usage_00011.pdb 1 -LYKQIMVGVFERVYEVAPVW---EYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT 56 usage_00012.pdb 1 -LYKQIMVGVFERVYEVAPVW-LNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT 58 usage_00013.pdb 1 -LYKQIMVGVFERVYEVAPVW-LNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT 58 usage_00014.pdb 1 -LYKQIMVGVFERVYEVAPVWRLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT 59 LYKQIMVGVFERVYEVAPV EYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNT usage_00001.pdb 57 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG 116 usage_00011.pdb 57 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG 116 usage_00012.pdb 59 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG 118 usage_00013.pdb 59 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG 118 usage_00014.pdb 60 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG 119 AGDEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWG usage_00001.pdb 117 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGM 176 usage_00011.pdb 117 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGM 176 usage_00012.pdb 119 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGM 178 usage_00013.pdb 119 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGM 178 usage_00014.pdb 120 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESL----- 174 SDWLFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESL usage_00001.pdb 177 DPEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG 211 usage_00011.pdb 177 DPEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG 211 usage_00012.pdb 179 DPEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG 213 usage_00013.pdb 179 DPEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG 213 usage_00014.pdb 175 -PEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG 208 PEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################