################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:49 2021 # Report_file: c_1148_214.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00186.pdb # 2: usage_00462.pdb # 3: usage_01193.pdb # 4: usage_01445.pdb # 5: usage_01891.pdb # 6: usage_03045.pdb # 7: usage_03439.pdb # 8: usage_03655.pdb # 9: usage_03922.pdb # # Length: 42 # Identity: 3/ 42 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 42 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 42 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00186.pdb 1 --TK----GPSVFPLAPCSTAALGCLVKDYFPEPVTVSW--- 33 usage_00462.pdb 1 --------HMTHHAVS-DHEATLRCWALSFYPAEITLTW--- 30 usage_01193.pdb 1 QRTDAPKTHMTHHAVS-DHEATLRCWALSFYPAEITLTWQRD 41 usage_01445.pdb 1 --------HMTHHAVS-DHEATLRCWALSFYPAEITLTW--- 30 usage_01891.pdb 1 ------SMRLKARPSS-PGFSVLTCSAFSFYPPELQLRF--- 32 usage_03045.pdb 1 --------HMTHHPIS-DHEATLRCWALGFYPAEITLTWQ-- 31 usage_03439.pdb 1 --------HMTHHAVS-DHEATLRCWALSFYPAEITLTW--- 30 usage_03655.pdb 1 --------HMTHHAVS-DHEATLRCWALSFYPAEITLTW--- 30 usage_03922.pdb 1 --------EVRVWGKEADGILTLSCRAHGFYPRPIVVSW--- 31 L C a fyP w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################