################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:19 2021 # Report_file: c_0934_44.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00175.pdb # 2: usage_00224.pdb # 3: usage_00302.pdb # 4: usage_00303.pdb # 5: usage_00366.pdb # 6: usage_00648.pdb # # Length: 34 # Identity: 4/ 34 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 34 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 34 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00175.pdb 1 -PLAALAFKIMADPYV-GRLTFIRVYSGT--LTS 30 usage_00224.pdb 1 KRPGAIPTV-QIDN-ERVKVTEWRFPPGGET--- 29 usage_00302.pdb 1 -EFAALAFKVMTDPYV-GKLTFFRVYSGT--MTS 30 usage_00303.pdb 1 -EFAALAFKVMTDPYV-GKLTFFRVYSGT--MTS 30 usage_00366.pdb 1 -EFAALAFKVMTDPYV-GKLTFFRVYSGT--MTS 30 usage_00648.pdb 1 -PPLAKVFKVQVDPFM-GQVAYLRLYRGR--LKP 30 A fk Dp g t R y G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################