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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:55:58 2021
# Report_file: c_0581_63.html
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#====================================
# Aligned_structures: 8
#   1: usage_00037.pdb
#   2: usage_00038.pdb
#   3: usage_00223.pdb
#   4: usage_00224.pdb
#   5: usage_00235.pdb
#   6: usage_00298.pdb
#   7: usage_00299.pdb
#   8: usage_00544.pdb
#
# Length:         80
# Identity:       38/ 80 ( 47.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     42/ 80 ( 52.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 80 ( 17.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00037.pdb         1  VIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLK   60
usage_00038.pdb         1  VIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLK   60
usage_00223.pdb         1  VIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHT---TGQVIIGGMGELHLDILVDRMK   57
usage_00224.pdb         1  VIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHT-----QVIIGGMGELHLDILVDRMK   55
usage_00235.pdb         1  VIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLK   60
usage_00298.pdb         1  VIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTD----QVIIGGMGELHLDILVDRMK   56
usage_00299.pdb         1  VIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTD----QVIIGGMGELHLDILVDRMK   56
usage_00544.pdb         1  VISVAVEPKTKADQEKMGIALGKLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMK   60
                           VI    EPK KADQ K  qAL  L eEDPtF   T     Q II GMGELHL I VDR K

usage_00037.pdb        61  REFKVDANVGKPQVAYRETI   80
usage_00038.pdb        61  REFKVDANVGKPQV------   74
usage_00223.pdb        58  KEFNVECNVGAPMVSYRETF   77
usage_00224.pdb        56  KEFNVECNVGAPMVSYRETF   75
usage_00235.pdb        61  REFKVDANVGKPQVAYRETI   80
usage_00298.pdb        57  KEFNVECNVGAPMVSYRETF   76
usage_00299.pdb        57  KEFNVECNVGAPMVSYRETF   76
usage_00544.pdb        61  REFGVEANIGK---------   71
                            EF V  NvG          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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