################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:19 2021 # Report_file: c_1442_484.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00801.pdb # 2: usage_03888.pdb # 3: usage_05454.pdb # 4: usage_08700.pdb # 5: usage_11585.pdb # 6: usage_11586.pdb # 7: usage_13016.pdb # 8: usage_13446.pdb # 9: usage_19857.pdb # 10: usage_19858.pdb # 11: usage_19859.pdb # # Length: 29 # Identity: 0/ 29 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 29 ( 3.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 29 ( 48.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00801.pdb 1 -GTYLCRARST-Q---GEVTREVTVNV-- 22 usage_03888.pdb 1 -GDYYMRMLHE-----TEDQWKITMEVYE 23 usage_05454.pdb 1 -GRVWCELATGQG-ELDADRSSTILKV-- 25 usage_08700.pdb 1 ---GSYICR--------ACCVKMILEVK- 17 usage_11585.pdb 1 -GNYLCRMKLG-E---TEVTKQEHLSVVK 24 usage_11586.pdb 1 -GNYLCRMKLG-E---TEVTKQEHLSVVK 24 usage_13016.pdb 1 GVNTLRIVTTG-TE--GP-NMDNITVTA- 24 usage_13446.pdb 1 -GIYTCSIYVG-K---LESRKTIVLHVVQ 24 usage_19857.pdb 1 -GNYLCRMKLG-E---TEVTKQEHLSVVK 24 usage_19858.pdb 1 -GNYLCRMKLG-E---TEVTKQEHLSVVK 24 usage_19859.pdb 1 -GNYLCRMKLG-E---TEVTKQEHLSVVK 24 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################