################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:21 2021 # Report_file: c_0381_6.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00002.pdb # 2: usage_00011.pdb # 3: usage_00014.pdb # 4: usage_00016.pdb # 5: usage_00034.pdb # 6: usage_00043.pdb # 7: usage_00076.pdb # 8: usage_00077.pdb # # Length: 93 # Identity: 20/ 93 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 93 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 93 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 NQICVRFVVNNASTVYGENVYLTGNVAELGN-WDTSKA-IGPMFNQVVYQYPTWYYDVSV 58 usage_00011.pdb 1 DQVSVRFVVNNATTALGQNVYLTGSVSELGN-WDPAKA-IGPMYNQVVYQYPNWYYDVSV 58 usage_00014.pdb 1 DQVSVRFVVNNATTALGQNVYLTGSVSELGN-WDPAKA-IGPMYNQVVYQYPNWYYDVSV 58 usage_00016.pdb 1 DQVSVRFVVNNATTALGQNVYLTGSVSELGN-WDPAKA-IGPMYNQVVYQYPNWYYDVSV 58 usage_00034.pdb 1 DQVSVRFVVNNATTALGQNVYLTGSVSELGN-ADPAKA-IGPMYNQVVYQYPNWYYDVSV 58 usage_00043.pdb 1 ----QTIVVKNVPTTIGDTVYITGNRAELGS-WDTKQYPIQLYYDSH-SN--DWRGNVVL 52 usage_00076.pdb 1 DQVTVRFVVNNASTTLGQNLYLTGNVAELGNWSTGSTA-IGPAFNQVIHQYPTWYYDVSV 59 usage_00077.pdb 1 NQICVRFVVNNASTVYGENVYLTGNVAELGN-WDTSKA-IGPMFNQVVYQYPTWYYDVSV 58 vrfVVnNa T G nvYlTG v ELGn d a Igp nqv q WyydVsv usage_00002.pdb 59 PAGTTIQFKFIKKNGN-TITWEGGSNHTYTVPS 90 usage_00011.pdb 59 PAGKTIEFKFLKKQGS-TVTWEGGSNHTFT--- 87 usage_00014.pdb 59 PAGKTIEFKFLKKQGS-TVTWEGGSNHTFT--- 87 usage_00016.pdb 59 PAGKTIEFKFLKKQGS-TVTWEGGSNHTFT--- 87 usage_00034.pdb 59 PAGKTIEFKFLKKQGS-TVTWEGGSNHTFT--- 87 usage_00043.pdb 53 PAERNIEFKAFIKSKDGTVKSWQTIQQSWNP-- 83 usage_00076.pdb 60 PAGKQLEFKFFKKNGS-TITWESGSNHTFTTP- 90 usage_00077.pdb 59 PAGTTIQFKFIKKNGN-TITWEGGSNHTYTVPS 90 PAg i FKf kK g T twe gsnht t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################