################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:01 2021 # Report_file: c_1288_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00047.pdb # 2: usage_00340.pdb # 3: usage_00387.pdb # 4: usage_00388.pdb # 5: usage_00696.pdb # 6: usage_00829.pdb # 7: usage_00830.pdb # 8: usage_00878.pdb # 9: usage_01221.pdb # 10: usage_01222.pdb # 11: usage_01223.pdb # 12: usage_01224.pdb # 13: usage_01225.pdb # 14: usage_01226.pdb # 15: usage_01227.pdb # # Length: 71 # Identity: 23/ 71 ( 32.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 71 ( 54.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 71 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 GVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF---KNYGCNGGLI 57 usage_00340.pdb 1 ---PIRNQGRCGS-WAFSVVVVVEGISKIVTDELPSLSEQQLVDCATSY-KNLGCSGGWM 55 usage_00387.pdb 1 ---PVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_00388.pdb 1 ---PVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_00696.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_00829.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_00830.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_00878.pdb 1 ---PVKNQGQCGS-WAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 55 usage_01221.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01222.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01223.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01224.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01225.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01226.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 usage_01227.pdb 1 ---PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG-PQGNEGCNGGLM 56 PvknQg CG AFS g Egq t LisLSEQ LVDCs N GCnGGlm usage_00047.pdb 58 NNAFEDMIELG 68 usage_00340.pdb 56 TKAYDYIIKNG 66 usage_00387.pdb 57 DYAFQYVQDNG 67 usage_00388.pdb 57 DYAFQYVQDNG 67 usage_00696.pdb 57 DYAFQYVQDNG 67 usage_00829.pdb 57 DYAFQYVQD-- 65 usage_00830.pdb 57 DYAFQYVQDNG 67 usage_00878.pdb 56 DYAFQYVQDNG 66 usage_01221.pdb 57 DYAFQYVQDNG 67 usage_01222.pdb 57 DYAFQYVQDNG 67 usage_01223.pdb 57 DYAFQYVQDNG 67 usage_01224.pdb 57 DYAFQYVQDNG 67 usage_01225.pdb 57 DYAFQYVQDNG 67 usage_01226.pdb 57 DYAFQYVQDNG 67 usage_01227.pdb 57 DYAFQYVQDNG 67 Af y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################