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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:05:27 2021
# Report_file: c_1386_6.html
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#====================================
# Aligned_structures: 9
#   1: usage_00143.pdb
#   2: usage_00237.pdb
#   3: usage_00376.pdb
#   4: usage_00395.pdb
#   5: usage_00396.pdb
#   6: usage_00397.pdb
#   7: usage_01052.pdb
#   8: usage_01235.pdb
#   9: usage_01236.pdb
#
# Length:         79
# Identity:        0/ 79 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/ 79 ( 24.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           40/ 79 ( 50.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00143.pdb         1  ---------SKEELIKLAY--S-IRPRENEYKTILTNLDEYNKLT--------TNNNENK   40
usage_00237.pdb         1  NRHTLTKWF-YDVHNAVNNKL-EVDYGL-----SYEDVVNKYESFRAKCGKVT------P   47
usage_00376.pdb         1  ---------NKAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   41
usage_00395.pdb         1  ---------NKAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   41
usage_00396.pdb         1  ----------KAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   40
usage_00397.pdb         1  ---------NKAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   41
usage_01052.pdb         1  ---------SKEELIKLAY--S-IRPRENEYKTILTNLDEYNKLT--------TNNNENK   40
usage_01235.pdb         1  ---------NKAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   41
usage_01236.pdb         1  ---------NKAQLQKMAY--VKFRIQEDEYVAILNALEEYHNMS--------ESSVVEK   41
                                     k  l k ay     r  e     il  l ey                  k

usage_00143.pdb        41  YLQLKKLNESIDVFMNKYK   59
usage_00237.pdb        48  LDHKAFSFKKLY-------   59
usage_00376.pdb        42  YLKLKDINNLTDNYLNTY-   59
usage_00395.pdb        42  YLKLKDINNLTDNYLNTY-   59
usage_00396.pdb        41  YLKLKDINNLTDNYLNTYK   59
usage_00397.pdb        42  YLKLKDINNLTDNYLNTY-   59
usage_01052.pdb        41  YLQLKKLNESIDVFMNKYK   59
usage_01235.pdb        42  YLKLKDINNLTDNYLNTY-   59
usage_01236.pdb        42  YLKLKDINNLTDNYLNTY-   59
                           yl lk  n   d       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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