################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:51 2021 # Report_file: c_1376_96.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00251.pdb # 2: usage_00252.pdb # 3: usage_00881.pdb # 4: usage_00882.pdb # 5: usage_00988.pdb # 6: usage_00989.pdb # # Length: 40 # Identity: 15/ 40 ( 37.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 40 ( 37.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 40 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00251.pdb 1 --NTGAMLADAHGLFMLEFSKTINPSLRTKQPNEIAATF- 37 usage_00252.pdb 1 --NTGAMLADAHGLFMLEFSKTINPSLRTKQPNEIAATF- 37 usage_00881.pdb 1 PGDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFT 40 usage_00882.pdb 1 -GDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATF- 38 usage_00988.pdb 1 ---AGATIADAHGLFMIEFSKTINPSLRTKQANEVAATF- 36 usage_00989.pdb 1 ---AGATIADAHGLFMIEFSKTINPSLRTKQANEVAAT-- 35 DAH L FS INP LR E AAT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################