################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:08 2021 # Report_file: c_0903_14.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00027.pdb # 2: usage_00083.pdb # 3: usage_00167.pdb # 4: usage_00211.pdb # 5: usage_00240.pdb # 6: usage_00241.pdb # 7: usage_00242.pdb # 8: usage_00248.pdb # 9: usage_00249.pdb # 10: usage_00291.pdb # 11: usage_00351.pdb # 12: usage_00352.pdb # 13: usage_00353.pdb # 14: usage_00451.pdb # 15: usage_00453.pdb # 16: usage_00454.pdb # 17: usage_00653.pdb # 18: usage_00759.pdb # 19: usage_00794.pdb # 20: usage_00795.pdb # 21: usage_00814.pdb # # Length: 59 # Identity: 35/ 59 ( 59.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 59 ( 66.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 59 ( 32.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00083.pdb 1 -DPAVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 55 usage_00167.pdb 1 -----YQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 51 usage_00211.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00240.pdb 1 --PAVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 54 usage_00241.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00242.pdb 1 -----YQLR---DSK----SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 47 usage_00248.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00249.pdb 1 ----AVYQL---R------SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 46 usage_00291.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00351.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00352.pdb 1 -----YQLR---D------SVCLFTDFDSQTNVSQS---DVYITDKCVLDMRSMDFKSN 42 usage_00353.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00451.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00453.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00454.pdb 1 ---AVYQLR---DSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 53 usage_00653.pdb 1 PDPAVYQLR---DS-----SVCLFTDFDSQTNVSQS--SDVYITDKCVLDMRSMDFKSN 49 usage_00759.pdb 1 ---AVYQLRSSD------KSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSN 50 usage_00794.pdb 1 ---AVYQLR---D-------VCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 46 usage_00795.pdb 1 ---AVYQLR---D------SVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSN 47 usage_00814.pdb 1 ---AVYQLR---DSK---SSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSN 50 yqlr VCLFTDFDSQTNVSQS DVYITDK VLDMRSMDFKSN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################