################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:58 2021 # Report_file: c_0579_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00028.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00171.pdb # 5: usage_00172.pdb # 6: usage_00236.pdb # 7: usage_00270.pdb # 8: usage_00297.pdb # # Length: 75 # Identity: 20/ 75 ( 26.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 75 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 75 ( 8.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 GTVIDHIPAGRAFAVLNVLGI--KEGFRIALVINVDSKKMGKKDIVKIEDKEISDTEANL 58 usage_00036.pdb 1 GTVIDHIPAQIGFKLLSLFKLTET-DQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQ 59 usage_00037.pdb 1 GTVIDHIPAQIGFKLLSLFKLTET-DQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQ 59 usage_00171.pdb 1 GTVIDHIDAGKALMVFKVLNV--PKETSVMIAINVPSKKKGKKDILKIEGIELKKEDVDK 58 usage_00172.pdb 1 GTVIDHIDAGKALMVFKVLNV--PKETSVMIAINVPSKKKGKKDILKIEGIELKKEDVDK 58 usage_00236.pdb 1 GTVIDHIPAQIGFKLLSLFKLTET-DQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQ 59 usage_00270.pdb 1 GTVIDHIPAQIGFKLLSLFKLTET-DQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQ 59 usage_00297.pdb 1 GTVIDHIPAQIGFKLLSLFKLTET-DQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQ 59 GTVIDHI A i N pS G KD KIE l vd usage_00028.pdb 59 ITLIAPTATINIVRE 73 usage_00036.pdb 60 LALYAPQATVNRIDN 74 usage_00037.pdb 60 LALYAPQATVNRIDN 74 usage_00171.pdb 59 ISLISPDVTINIIRN 73 usage_00172.pdb 59 ISLISPDVTINIIRN 73 usage_00236.pdb 60 LALYAPQATVNRID- 73 usage_00270.pdb 60 LALYAPQATVNRIDN 74 usage_00297.pdb 60 LALYAPQATVNR--- 71 L P T N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################