################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:37 2021 # Report_file: c_0697_26.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00224.pdb # 2: usage_00225.pdb # 3: usage_00325.pdb # 4: usage_00326.pdb # 5: usage_00327.pdb # 6: usage_00328.pdb # 7: usage_00329.pdb # 8: usage_00330.pdb # 9: usage_00409.pdb # # Length: 69 # Identity: 2/ 69 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 69 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 69 ( 63.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 EKISLIGEEIPFETTFAVKNGNRAAS---ELVFKK--SRNEYATAYLNMVRNEDNTLN-- 53 usage_00225.pdb 1 EKISLIGEEIPFETTFAV------AS---ELVFKK--SRNEYATAYLNMVRNEDNTLN-I 48 usage_00325.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00326.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00327.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00328.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00329.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00330.pdb 1 DAVRLEAKEYAFDDIQVGTDKGVVTS---DLVFRK--SRNEYVTATVEVARTASGTEV-- 53 usage_00409.pdb 1 -QFVLEANQ-----------------VFRNGQTAFVTSNT----NFVLVNQG------R- 31 L e lvf k Srn a r usage_00224.pdb 54 ITEQQS--G 60 usage_00225.pdb 49 TEQQSG--- 54 usage_00325.pdb 54 VEQASG--- 59 usage_00326.pdb 54 VEQASG--- 59 usage_00327.pdb --------- usage_00328.pdb --------- usage_00329.pdb 54 VEQASG--- 59 usage_00330.pdb --------- usage_00409.pdb 32 GTVQVAFN- 39 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################