################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:11 2021 # Report_file: c_1408_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00457.pdb # 2: usage_00458.pdb # 3: usage_00722.pdb # 4: usage_00723.pdb # 5: usage_00724.pdb # 6: usage_00725.pdb # 7: usage_00726.pdb # 8: usage_00727.pdb # 9: usage_00728.pdb # 10: usage_01177.pdb # 11: usage_01298.pdb # # Length: 90 # Identity: 4/ 90 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 90 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 90 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00457.pdb 1 SPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFA 60 usage_00458.pdb 1 SPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFA 60 usage_00722.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_00723.pdb 1 -PEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 59 usage_00724.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_00725.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_00726.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_00727.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_00728.pdb 1 TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA 60 usage_01177.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_01298.pdb 1 --DSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLC 58 ee r y s l W G f q l p a usage_00457.pdb 61 QLLEEIKQQLNSTADAVQEQDQ-------- 82 usage_00458.pdb 61 QLLEEIKQQLNSTADAVQE----------- 79 usage_00722.pdb 61 VLLNEVGQQLHNSATILEDTDQQIASQIR- 89 usage_00723.pdb 60 VLLNEVGQQLHNSATILEDTDQQIA----- 84 usage_00724.pdb 61 VLLNEVGQQLHNSATILEDTDQQIASQI-- 88 usage_00725.pdb 61 VLLNEVGQQLHNSATILEDTDQQIASQIR- 89 usage_00726.pdb 61 VLLNEVGQQLHNSATILEDTDQQIASQIRG 90 usage_00727.pdb 61 VLLNEVGQQLHNSATILEDTDQQIAS---- 86 usage_00728.pdb 61 VLLNEVGQQLHNSATILEDTDQQIA----- 85 usage_01177.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQI-- 88 usage_01298.pdb 59 VQLSEVERQIHEIVRAYEWAHH-------- 80 lL e qQl a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################