################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:18 2021 # Report_file: c_1008_9.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00014.pdb # 2: usage_00146.pdb # 3: usage_00156.pdb # 4: usage_00166.pdb # # Length: 68 # Identity: 23/ 68 ( 33.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 68 ( 60.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 68 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 KIVQIPFCGEIDCEDWIKKTTAR-------MGAKSLCIPFKPLCELQP-GAKCVC--NPA 50 usage_00146.pdb 1 KMVIAPWCEDVSCEEEIKKETARLS-----GAMKSLCIPNDQIFKIEEGKTKCFFCDKLA 55 usage_00156.pdb 1 KMVLAPWCEDIATEEEIKKETQRLSLTLS-GAMKPLCIPLDQ-PPMPP-NMKCFWSGKPA 57 usage_00166.pdb 1 KMVLAPWCEDIATEEEIKKETQRLS----SGAMKPLCIPLDQ-PPMPP-NMKCFWSGKPA 54 KmV aPwCedi EeeIKKeT R gamK LCIP dq p KCf kpA usage_00014.pdb 51 KYYTLFGR 58 usage_00146.pdb 56 KKFTLFGR 63 usage_00156.pdb 58 KRWCLFGR 65 usage_00166.pdb 55 KRWCLFGR 62 K LFGR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################