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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 22:59:56 2021
# Report_file: c_1252_41.html
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#====================================
# Aligned_structures: 4
#   1: usage_00562.pdb
#   2: usage_00997.pdb
#   3: usage_01564.pdb
#   4: usage_01565.pdb
#
# Length:         62
# Identity:        4/ 62 (  6.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     42/ 62 ( 67.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/ 62 ( 32.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00562.pdb         1  ----VTIIYTNDLHAHVEPYKVPWIADGKRDIG---GWANITTLVKQEKAKNKATWFFDA   53
usage_00997.pdb         1  -----SHLIYSFASI-------ENN----KVIIKDKSEVMLYQTINSLKTKNPKLKILLS   44
usage_01564.pdb         1  LAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIG---GWANITTLVKQEKAKNKATWFFDA   57
usage_01565.pdb         1  ----VTIIYTNDLHAHVEPYKVPWIADGKRDIG---GWANITTLVKQEKAKNKATWFFDA   53
                                tiiytndlha       pwi    rdIg   gwanittlvkqeKaKNkatwffda

usage_00562.pdb        54  G-   54
usage_00997.pdb        45  IG   46
usage_01564.pdb        58  G-   58
usage_01565.pdb        54  G-   54
                           g 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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