################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:09 2021 # Report_file: c_0790_28.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00245.pdb # 2: usage_00246.pdb # 3: usage_00247.pdb # 4: usage_00248.pdb # 5: usage_00249.pdb # 6: usage_00250.pdb # 7: usage_00251.pdb # 8: usage_00252.pdb # 9: usage_00628.pdb # 10: usage_00630.pdb # 11: usage_01001.pdb # # Length: 78 # Identity: 10/ 78 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 78 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 78 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00245.pdb 1 RIVLLDSSLEYK--------------DFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 46 usage_00246.pdb 1 RIVLLDSSLEYK-------------EDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 47 usage_00247.pdb 1 RIVLLDSSLEYK--------------DFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 46 usage_00248.pdb 1 RIVLLDSSLEY------------------------E-YIHQLCEDIIQLKPDVVITEKGI 35 usage_00249.pdb 1 RIVLLDSSLEY------------------I-LQMEEEYIHQLCEDIIQLKPDVVITEKGI 41 usage_00250.pdb 1 RIVLLDSSLEYKK-------------DFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 47 usage_00251.pdb 1 RIVLLDSSLEYK-------------EDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 47 usage_00252.pdb 1 RIVLLDSSLEY----------------T-RILQMEEEYIHQLCEDIIQLKPDVVITEKGI 43 usage_00628.pdb 1 RIVLLDSSLEY---------------------------IQQLCEDIIQLKPDVVITEKGI 33 usage_00630.pdb 1 YILTCNVSLEY---------------------------IEDRVKKIIELKGFVVINQKGI 33 usage_01001.pdb 1 RVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGV 60 rivlld sLEY i ce Ii lkp vVIteKGi usage_00245.pdb 47 SDLAQHYLMRANVTAIRR 64 usage_00246.pdb 48 SDLAQHYLMRANVTAIRR 65 usage_00247.pdb 47 SDLAQHYLMRANVTAIRR 64 usage_00248.pdb 36 SDLAQHYLMRANVTAIR- 52 usage_00249.pdb 42 SDLAQHYLMRANVTAIR- 58 usage_00250.pdb 48 SDLAQHYLMRANVTAIR- 64 usage_00251.pdb 48 SDLAQHYLMRANVTAIR- 64 usage_00252.pdb 44 SDLAQHYLMRANVTAIR- 60 usage_00628.pdb 34 SDLAQHYLMRANITAIRR 51 usage_00630.pdb 34 DPFSLDALAKEGIIALRR 51 usage_01001.pdb 61 SDLAQHYLLKGGCSVLRR 78 sdlaqhyL a R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################