################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:58 2021 # Report_file: c_0148_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00011.pdb # 3: usage_00029.pdb # 4: usage_00041.pdb # 5: usage_00105.pdb # 6: usage_00145.pdb # 7: usage_00162.pdb # 8: usage_00246.pdb # 9: usage_00289.pdb # 10: usage_00292.pdb # 11: usage_00312.pdb # 12: usage_00313.pdb # 13: usage_00320.pdb # # Length: 109 # Identity: 57/109 ( 52.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/109 ( 63.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/109 ( 5.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWFQQKPGQSPKLLIYSASYRYTGVPD 60 usage_00011.pdb 1 -IVMTQSPKSMYVSIGERVTLSCKASENVDTYVSWYQQKPEQSPKLLIYGASNRYTGVPD 59 usage_00029.pdb 1 DVVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKSGQSPKLLIHSASYRYTGVPD 60 usage_00041.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD 60 usage_00105.pdb 1 DIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPD 60 usage_00145.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD 60 usage_00162.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQIVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD 60 usage_00246.pdb 1 DIVMTQSQKFMSTSAGDRVSITCKASQNVRTAVAWYQQKPGQSPKALIYLASNRHTGVPD 60 usage_00289.pdb 1 -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD 59 usage_00292.pdb 1 -LVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD 59 usage_00312.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPD 60 usage_00313.pdb 1 --LMTQIPASMSISVGDRVTMNCKASQNVDSNVDWYQQKTGQSPNLLIYKASNRNTGVPD 58 usage_00320.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPD 60 vmTQ k Ms S GdRV CKASq V WyQQ gQSPklLIy AS R TGVPD usage_00005.pdb 61 RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYGTPLTFGAGTKLEL--- 106 usage_00011.pdb 60 RFTGSGSATDFTLTISSVQAEDLADYHCGQSYNYPFTFGSGTKLEI--- 105 usage_00029.pdb 61 RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSIPLTFGAGTKLEL--- 106 usage_00041.pdb 61 RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI--- 106 usage_00105.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLEL--- 106 usage_00145.pdb 61 RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI--- 106 usage_00162.pdb 61 RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYNSPQTFGGGTKLEI--- 106 usage_00246.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCLQHWSYPYTFGGGTKLE---- 105 usage_00289.pdb 60 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI--- 105 usage_00292.pdb 60 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI--- 105 usage_00312.pdb 61 RFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPWTFGGGTKLELKRT 109 usage_00313.pdb 59 RFTGSGSGTDFTFTISNMQAEDLAVYYCMQSTSYPLTFGSGTKLEI--- 104 usage_00320.pdb 61 RFTASGSGTDFTFTISSVQAEDLALYYCQQHYTTPWTFGGGTKLEI--- 106 RFT SGSgTDFT TIS Q EDLA Y C Q P TFG GTK E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################