################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:37 2021 # Report_file: c_0082_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00199.pdb # 2: usage_00206.pdb # 3: usage_00232.pdb # 4: usage_00337.pdb # 5: usage_00338.pdb # 6: usage_00364.pdb # # Length: 178 # Identity: 22/178 ( 12.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/178 ( 41.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/178 ( 3.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00199.pdb 1 DDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS 60 usage_00206.pdb 1 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 60 usage_00232.pdb 1 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 60 usage_00337.pdb 1 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG 60 usage_00338.pdb 1 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG 60 usage_00364.pdb 1 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 60 f q Aa lkg T ylL t Kp e L HaAaGGvG acqwA alGak iGTv usage_00199.pdb 61 TEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRG 120 usage_00206.pdb 61 SPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRG 120 usage_00232.pdb 61 TEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGG 120 usage_00337.pdb 61 TAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 120 usage_00338.pdb 61 TAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 120 usage_00364.pdb 61 SPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRG 120 ka a Ga i y d e t gK vvyd g dt sLd rG usage_00199.pdb 121 MCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAG 178 usage_00206.pdb 121 LVVSFGNASGPVSGVNLG-ILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASG 177 usage_00232.pdb 121 RVIVVGSRG--TIEINPR-DTM-AKESSIIGVTLFS-ST-KEEFQQYAAALQAGMEIG 172 usage_00337.pdb 121 LMVSFGNSSGAVTGVNLG-ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASG 177 usage_00338.pdb 121 LMVSFGNSSGAVTGVNLG-ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASG 177 usage_00364.pdb 121 LVVSFGNASGPVSGVNLG-ILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASG 177 G s n l s trp L Lf G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################