################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:22 2021 # Report_file: c_0972_16.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00014.pdb # 6: usage_00015.pdb # 7: usage_00021.pdb # 8: usage_00148.pdb # 9: usage_00218.pdb # # Length: 64 # Identity: 3/ 64 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 64 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -----HWIPVVAGFLRK-DGKILVGQRPENNSLAG-QWEFPGGKIENGETPEEALARELN 53 usage_00004.pdb 1 -----HWIPVVAGFLRK-DGKILVGQRP------G-QWEFPGGKIENGETPEEALARELN 47 usage_00005.pdb 1 ----GHWIPVVAGFLRK-DGKILVGQRPENNSLAG-QWEFPGGKIENGETPEEALARELN 54 usage_00006.pdb 1 -----HWIPVVAGFLRK-DGKILVGQRPE-----G-QWEFPGGKIENGETPEEALARELN 48 usage_00014.pdb 1 ----GHWIPVVAGFLRK-DGKILVGQRPENNSLAG-QWEFPGGKIENGETPEEALARELN 54 usage_00015.pdb 1 -----HWIPVVAGFLRK-DGKILVGQRPENNSLAG-QWEFPGGKIENGETPEEALARELN 53 usage_00021.pdb 1 KKTAVKQVPLAVAVLADDEGRVLIRKRDSTGLLAN-LWEFPSCETDGA-DGKEKLEQMVG 58 usage_00148.pdb 1 -------VRVVNAFLRNSQGQLWIPRRP------NALDVSVGGAVQSGETYEEAFRREAR 47 usage_00218.pdb 1 -----PILLVTAAALIDPDGRVLLAQRPPGKSLAG-LWEFPGGKLEPGETPEAALVRELA 54 v L G l Rp wefpgg g t eeal re usage_00003.pdb 54 E--- 54 usage_00004.pdb 48 E--- 48 usage_00005.pdb 55 E--- 55 usage_00006.pdb 49 E--- 49 usage_00014.pdb 55 EELG 58 usage_00015.pdb 54 EE-- 55 usage_00021.pdb ---- usage_00148.pdb 48 EE-- 49 usage_00218.pdb 55 EE-- 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################