################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:55 2021 # Report_file: c_1221_324.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00039.pdb # 2: usage_00064.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00221.pdb # 6: usage_00649.pdb # 7: usage_00652.pdb # 8: usage_01678.pdb # 9: usage_01680.pdb # 10: usage_01682.pdb # 11: usage_01684.pdb # 12: usage_02207.pdb # 13: usage_02480.pdb # # Length: 30 # Identity: 4/ 30 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 30 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 30 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 ---SLCGND---GVTYSSACHLRKATCLLG 24 usage_00064.pdb 1 --QYLCGND---GVTYSSACHLRKATCLLG 25 usage_00065.pdb 1 --QYLCGND---GVTYSSACHLRKATCLLG 25 usage_00066.pdb 1 SDEPVCASD---NATYASECAMKEAACSSG 27 usage_00221.pdb 1 --QELCGNN---NVTYISSCHMRQATCFLG 25 usage_00649.pdb 1 --QYLCGND---GVTYSSACHLRKATCLLG 25 usage_00652.pdb 1 -EQYLCGND---GVTYSSACHLRKATCLLG 26 usage_01678.pdb 1 --QELCGNN---NVTYISSCHMRQATCFLG 25 usage_01680.pdb 1 --QELCGNN---NVTYISSCHMRQATCFLG 25 usage_01682.pdb 1 --QELCGNN---NVTYISSCHMRQATCFLG 25 usage_01684.pdb 1 --QELCGNN---NVTYISSCHMRQATCFLG 25 usage_02207.pdb 1 --QYLCGND---GVTYSSACHLRKATCLLG 25 usage_02480.pdb 1 --APICATDGVSQRTFSNPCDLKVYNCWNP 28 C Ty s C a C g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################