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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:02:53 2021
# Report_file: c_1197_2.html
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#====================================
# Aligned_structures: 6
#   1: usage_00233.pdb
#   2: usage_01034.pdb
#   3: usage_01061.pdb
#   4: usage_01179.pdb
#   5: usage_01378.pdb
#   6: usage_01379.pdb
#
# Length:         87
# Identity:        0/ 87 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     12/ 87 ( 13.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           67/ 87 ( 77.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00233.pdb         1  TQT----------SVVFTVKS-------AP-PTNLGDKIYLTGN-I--PELGNWSTDTSG   39
usage_01034.pdb         1  -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS--   33
usage_01061.pdb         1  -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS--   33
usage_01179.pdb         1  ---TGHGVGLTLN---VHEGGCSIGPVGG-APLKKNMVLSNEPGYYMK------------   41
usage_01378.pdb         1  -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS--   33
usage_01379.pdb         1  -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS--   33
                                           f v         a   t lg  lyltgn                

usage_00233.pdb        40  AVNNAQGPLLAP---NYPDWFYVFSVP   63
usage_01034.pdb        34  ---TAIGPAFNQVIHQYPTWYYD----   53
usage_01061.pdb        34  ---TAIGPAFNQVIHQYPTWYYD----   53
usage_01179.pdb            ---------------------------     
usage_01378.pdb        34  ---TAIGPAFNQVIHQYPTWYYD----   53
usage_01379.pdb        34  ---TAIGPAFNQVIHQYPTWYYD----   53
                                                      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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