################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:11 2021 # Report_file: c_1483_70.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00346.pdb # 2: usage_00778.pdb # 3: usage_00853.pdb # 4: usage_01276.pdb # 5: usage_01544.pdb # 6: usage_02005.pdb # 7: usage_02153.pdb # 8: usage_02241.pdb # 9: usage_02586.pdb # 10: usage_02587.pdb # # Length: 78 # Identity: 0/ 78 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 78 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/ 78 ( 85.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00346.pdb 1 -------------FLDEAQSKKI---------T--K------EEFANEFLKLK------- 23 usage_00778.pdb 1 ------DCFELLSMVTYADKLKSL--------I--K-KEFSISFEEFAVLTYISE----- 38 usage_00853.pdb 1 ------------------------------------K-----EKRLREIQFEKEMIERDM 19 usage_01276.pdb 1 EGTFIS-DYSIAMDK---------------------------IHQQDFVNWLLAQKGKKN 32 usage_01544.pdb 1 -------RVTQLIERLYDELVQYR------GEA--A------NFTSFLRVCCLRYQVLQA 39 usage_02005.pdb 1 -------QREILQKFLDEAQSKKI--------T--K------EEFANEFLKLKRQSTKYK 37 usage_02153.pdb 1 -------QVEILRKFIQRVQAMKSPDHNGE------------DNFARDFMRLRRLSTKYR 41 usage_02241.pdb 1 ----------SARSFLERLEARG----------GREG-----AVLAGEFSDIQACSAAWK 35 usage_02586.pdb 1 ------DQREILQKFLDEAQSKKI--------T--K------EEFANEFLKLKRQSTKYK 38 usage_02587.pdb 1 ------DQREILQKFLDEAQSKKI--------T--K------EEFANEFLKLKRQSTKYK 38 usage_00346.pdb ------------------ usage_00778.pdb ------------------ usage_00853.pdb 20 RE-YRGFSRAVRAVFEEK 36 usage_01276.pdb 33 DWKH---------N---- 37 usage_01544.pdb 40 EG---------------- 41 usage_02005.pdb 38 AD-K-------------- 40 usage_02153.pdb 42 TE-K-------------- 44 usage_02241.pdb 36 AD-G-------------- 38 usage_02586.pdb 39 AD-K-------------- 41 usage_02587.pdb 39 AD-K-------------- 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################