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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:57:35 2021
# Report_file: c_0339_7.html
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#====================================
# Aligned_structures: 13
#   1: usage_00020.pdb
#   2: usage_00021.pdb
#   3: usage_00039.pdb
#   4: usage_00040.pdb
#   5: usage_00048.pdb
#   6: usage_00050.pdb
#   7: usage_00106.pdb
#   8: usage_00107.pdb
#   9: usage_00108.pdb
#  10: usage_00109.pdb
#  11: usage_00110.pdb
#  12: usage_00116.pdb
#  13: usage_00117.pdb
#
# Length:        103
# Identity:       25/103 ( 24.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     36/103 ( 35.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           33/103 ( 32.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00020.pdb         1  ------SGGGSVQAGQSLRLSCATSA----TSSS-NCMGWFRQAPGKEREGVAVIDTG--   47
usage_00021.pdb         1  ---------GSVQAGGSLRLSCAASGY-TD-S-R-YCMAWFRQAPGKEREWVARINSG--   45
usage_00039.pdb         1  --QLQESGGGLVQAGDSLKLSCEASGDS--IG-T-YVIGWFRQAPGKERIYLATIGRNLV   54
usage_00040.pdb         1  --QLQESGGGLVQAGDSLKLSCEASGDS--IG-T-YVIGWFRQAPGKERIYLATIGRNLV   54
usage_00048.pdb         1  -VQLQESGGGSVQTGGSLRLSCAASEY-TQ---SSACMGWFRQAPGKEREGVAGISRF--   53
usage_00050.pdb         1  ---------GSVQAGGSLRLSCAAST----FS-S-YPMGWYRQAPGKECELSARIFSD--   43
usage_00106.pdb         1  QVQLVESGGGLVQAGGSLRLSCAASRR-SS-R-S-WAMAWFRQAPGKEREFVAKISGD--   54
usage_00107.pdb         1  --QLVESGGGLVQAGGSLRLSCAASRR-SS-R-S-WAMAWFRQAPGKEREFVAKISGD--   52
usage_00108.pdb         1  --QLVESGGGLVQAGGSLRLSCAASRR-SS-R-S-WAMAWFRQAPGKEREFVAKISGD--   52
usage_00109.pdb         1  --QLVESGGGLVQAGGSLRLSCAASRR-SS-R-S-WAMAWFRQAPGKEREFVAKISGD--   52
usage_00110.pdb         1  --QLVES-G---QAGGSLRLSCAASRR-SS-R-S-WAMAWFR-A--KEREFVAKISGD--   45
usage_00116.pdb         1  EVQLVESGGGLVQAGDSLRLSCTASGRT--LG-D-YGVAWFRQAPGKEREFVSVISRS--   54
usage_00117.pdb         1  EVQLVESGGGLVQAGDSLRLSCTASGRT--LG-D-YGVAWFRQAPGKEREFVSVISRS--   54
                                       QaG SL LSC aS              WfR A  KEr     I     

usage_00020.pdb        48  ----RGNTAYADSVQGRLTISLDN--NTLYLQMNSLKPEDTAM   84
usage_00021.pdb        46  ----RDITYYADSVKGRFTFSQDNAKNTVYLQMDSLEPEDTAT   84
usage_00039.pdb        55  GPSDF-YTRYADSVKGRFAVSRDNAKNTVNLQMNSLKPEDTAV   96
usage_00040.pdb        55  GPSDF-YTRYADSVKGRFAVSRDNAKNTVNLQMNSLKPEDTAV   96
usage_00048.pdb        54  ----FGTAYYADSVKGRFTISQDKAKNTVYLQMNSLKPEDTAI   92
usage_00050.pdb        44  ----G-SANYADSVKGRFTISRDNAANTAYLQMDSLKPEDTAV   81
usage_00106.pdb        55  ----GRLTTYGDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAV   93
usage_00107.pdb        53  ----GRLTTYGDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAV   91
usage_00108.pdb        53  ----GRLTTYGDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAV   91
usage_00109.pdb        53  ----GRLTTYGDSVKGRFTISRDNAEYLVYLQMDSLKPEDTAV   91
usage_00110.pdb        46  ----GRLTTYGDSVKGRFTISRDNAEYLVYLQMDLKPEDTA-V   83
usage_00116.pdb        55  ----TIITDYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAV   93
usage_00117.pdb        55  ----TIITDYADSVRGRFSISADSAKNTVYLQMNSLKPEDTAV   93
                                    Y DSV GRf  S D       LQM sl pedt  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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