################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:33 2021 # Report_file: c_0684_48.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00223.pdb # 2: usage_00229.pdb # 3: usage_00234.pdb # # Length: 93 # Identity: 4/ 93 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 93 ( 57.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 93 ( 43.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 YQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNN--TGGILNFVTKRALCEGENSKMSWTQS 58 usage_00229.pdb 1 ---QFERTILVADEDSYVSYIEGCSAP-----VRDSYQLHAAVVEVII-HKNAEVKYSTV 51 usage_00234.pdb 1 --------------DSYVSYIEGCSAP-----VRDSYQLHAAVVEVII-HKNAEVKYSTV 40 dsyVsYiegcsap dsyqLhaavvevii hkNaevkystv usage_00223.pdb 59 ETGS---------AITWKYPSCILR-------- 74 usage_00229.pdb 52 QNW-FPGDNNTGGILNFVTKRALCEG------- 76 usage_00234.pdb 41 QNW-FPGDNNTGGILNFVTKRALCEGENSKMSW 72 qnw ilnfvtkralce #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################