################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:49:00 2021 # Report_file: c_1056_61.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00077.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00080.pdb # 7: usage_00144.pdb # 8: usage_00164.pdb # 9: usage_00169.pdb # 10: usage_00313.pdb # 11: usage_00461.pdb # 12: usage_00462.pdb # 13: usage_00463.pdb # 14: usage_00464.pdb # 15: usage_00465.pdb # 16: usage_00466.pdb # 17: usage_00550.pdb # 18: usage_00551.pdb # 19: usage_00552.pdb # 20: usage_00643.pdb # 21: usage_00747.pdb # 22: usage_00925.pdb # # Length: 51 # Identity: 39/ 51 ( 76.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 51 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 51 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00002.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00077.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00078.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00079.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00080.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00144.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00164.pdb 1 LPEQWPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 51 usage_00169.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00313.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00461.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00462.pdb 1 ----WPALQAALPPGCPDALQYRATLDW-A-GHLSLTVHRVGELLILEFEP 45 usage_00463.pdb 1 ----WPALQAALPPGCPDALQYRATLDW-A-GHLSLTVHRVGELLILEFEP 45 usage_00464.pdb 1 ----WPALQAALPPGCPDALQYRATLDWA--GHLSLTVHRVGELLILEFEP 45 usage_00465.pdb 1 ----WPALQAALPPGCPDALQYRATLDWA-G-HLSLTVHRVGELLILEFEP 45 usage_00466.pdb 1 ----WPALQAALPPGCPDALQYRATLDWA-G-HLSLTVHRVGELLILEFEP 45 usage_00550.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFE- 46 usage_00551.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEP 47 usage_00552.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPG--HLSLTVHRVGELLILEFEP 45 usage_00643.pdb 1 ----WPALQTALPPGCQDALQYRATLDWPAAGHLSLTVHRVAELLILEFEP 47 usage_00747.pdb 1 ----WPALQAALPPGCPDALQYRATLDWPA--HLSLTVHRVGELLILEFE- 44 usage_00925.pdb 1 ----WPALQAALPPGCPDALQYRATLDWP---HLSLTVHRVGELLILEFEP 44 WPALQaALPPGCpDALQYRATLDW HLSLTVHRVgELLILEFE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################