################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:38 2021 # Report_file: c_1124_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00084.pdb # 4: usage_00085.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00089.pdb # 9: usage_00090.pdb # 10: usage_00091.pdb # 11: usage_00092.pdb # 12: usage_00169.pdb # 13: usage_00170.pdb # 14: usage_00171.pdb # # Length: 84 # Identity: 45/ 84 ( 53.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 84 ( 53.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 84 ( 4.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 LKAALSYILANRLNTASMPAMAVREVIEEAFAADPSISEAAACDICATVNRDPAVSMYSM 60 usage_00016.pdb 1 LKAALSYILANRLNTASMPAMAVREVIEEAFAADPSISEAAACDICATVNRDPAVSMYSM 60 usage_00084.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00085.pdb 1 -GSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 59 usage_00086.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00087.pdb 1 -GSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 59 usage_00088.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00089.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00090.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00091.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00092.pdb 1 LGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYST 60 usage_00169.pdb 1 -GSAL-SYLANKLSSPI-PAIAIREVVEEAYAADPE-IASAACDIQAVRTRDPAVDKYST 56 usage_00170.pdb 1 LGSAL-SYLANKLSSPI-PAIAIREVVEEAYAADPE-IASAACDIQAVRTRDPAVDKYST 57 usage_00171.pdb 1 LGSAL-SYLANKLSSPI-PAIAIREVVEEAYAADPE-IASAACDIQAVRTRDPAVDKYST 57 AL LAN L PA A REV EEA D AA DI A RDPAV YS usage_00015.pdb 61 PLLYLKGYHALQGYRVANWLWRQG 84 usage_00016.pdb 61 PLLYLKGYHALQGYRVANWLWRQG 84 usage_00084.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00085.pdb 60 PLLYLKGFHALQAYRIGHWLWAQD 83 usage_00086.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00087.pdb 60 PLLYLKGFHALQAYRIGHWLWAQD 83 usage_00088.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00089.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00090.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00091.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00092.pdb 61 PLLYLKGFHALQAYRIGHWLWAQD 84 usage_00169.pdb 57 PLLYLKGFHALQAYRIGHWLWNQG 80 usage_00170.pdb 58 PLLYLKGFHALQAYRIGHWLWNQG 81 usage_00171.pdb 58 PLLYLKGFHALQAYRIGHWLWNQG 81 PLLYLKG HALQ YR WLW Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################