################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:44:27 2021 # Report_file: c_0209_4.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00031.pdb # 4: usage_00062.pdb # 5: usage_00113.pdb # 6: usage_00114.pdb # 7: usage_00127.pdb # 8: usage_00128.pdb # 9: usage_00143.pdb # 10: usage_00152.pdb # 11: usage_00189.pdb # 12: usage_00190.pdb # 13: usage_00200.pdb # 14: usage_00291.pdb # 15: usage_00292.pdb # 16: usage_00338.pdb # 17: usage_00339.pdb # 18: usage_00352.pdb # 19: usage_00353.pdb # 20: usage_00383.pdb # 21: usage_00384.pdb # 22: usage_00413.pdb # # Length: 106 # Identity: 33/106 ( 31.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/106 ( 56.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/106 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLMIYSASNRYTGVPD 60 usage_00002.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLMIYSASNRYTGVPD 60 usage_00031.pdb 1 -LVMTQTPKFMSTTVGDRVSITCKASQNVGTPVAWYQQKPGQSPKLLIYSASNRYTGVPD 59 usage_00062.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQV-GTALAWYQQKPGQSPKLLIYWASTRHTGVPD 59 usage_00113.pdb 1 DIVMTQSQRFMTTSVGDRVSVTCKASQSVDSNVAWYQQKPRQSPKALIFSASLRFSGVPA 60 usage_00114.pdb 1 DIVMTQSQRFMTTSVGDRVSVTCKASQSVDSNVAWYQQKPRQSPKALIFSASLRFSGVPA 60 usage_00127.pdb 1 DIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPD 60 usage_00128.pdb 1 DIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPD 60 usage_00143.pdb 1 DIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPD 60 usage_00152.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYQYTGVPD 60 usage_00189.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLMIYSASNRYTGVPD 60 usage_00190.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLMIYSASNRYTGVPD 60 usage_00200.pdb 1 DIVMTQSPKSMGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPD 60 usage_00291.pdb 1 DIVMTQSQKFMSTSVGDRVSISCKASQNVGNIIAWYQQKPGQSPKALIYLASYRYSGVPD 60 usage_00292.pdb 1 DIVMTQSQKFMSTSVGDRVSISCKASQNVGNIIAWYQQKPGQSPKALIYLASYRYSGVPD 60 usage_00338.pdb 1 DIVMTQSQKLMSTSVGDRVSITCKASQIVDTAVAWYQQKPGQSPKPLIYLASNRHTGVPD 60 usage_00339.pdb 1 DIVMTQSQKLMSTSVGDRVSITCKASQIVDTAVAWYQQKPGQSPKPLIYLASNRHTGVPD 60 usage_00352.pdb 1 DIVMTQSPLSLSTSVGDRVSLTCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD 60 usage_00353.pdb 1 DIVMTQSPLSLSTSVGDRVSLTCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPD 60 usage_00383.pdb 1 DIVMTQSHKFMSTSVGDRVTITCKASQDVTTAVAWYQQKPGHSPKLLIYWASTRHTGVPD 60 usage_00384.pdb 1 -IVMTQSHKFMSTSVGDRVSITCKGSQDVNSALAWYQQVPGQSPALLIYSGSNRYSGVPG 59 usage_00413.pdb 1 DIVMTQSQKFMSTSIGDRVSITCKASQNVGSAVAWYQQKPGQSPKLLIYSASNRYTGVPD 60 iV TQs tsvGdrV CKaSq aWYQQkP qSP I aS r GVP usage_00001.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00002.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00031.pdb 60 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEI 105 usage_00062.pdb 60 RFTGSGSGTDFTLTISNVQSEDLSDYFCQQYSSYPTFGGGTKLEI- 104 usage_00113.pdb 61 RFTGSGSGTDFTLTISNLQSEDLAEYFCQQYNNYPLTFGAGTKLEL 106 usage_00114.pdb 61 RFTGSGSGTDFTLTISNLQSEDLAEYFCQQYNNYPLTFGAGTKLEL 106 usage_00127.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00128.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00143.pdb 61 RFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00152.pdb 61 RFTGSGSRTDFTFTINSVQAEDLAVYYCHQHYSTPFTFGSGTKLEI 106 usage_00189.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00190.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLEL 106 usage_00200.pdb 61 RFTGSGSATDFTLTISSVQADDDADYYCGQSYSSPLTFGGGTKLEL 106 usage_00291.pdb 61 RFTGSGSGTDFTLTISNVQSEDLAEYFCQQYSSFPLTFGAGTKLEL 106 usage_00292.pdb 61 RFTGSGSGTDFTLTISNVQSEDLAEYFCQQYSSFPLTFGAGTKLEL 106 usage_00338.pdb 61 RFTGSGSGTDFTLTINNVQSDDLADYFCLQHWNYPLTFGAGTKLEL 106 usage_00339.pdb 61 RFTGSGSGTDFTLTINNVQSDDLADYFCLQHWNYPLTFGAGTKLEL 106 usage_00352.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKL-- 104 usage_00353.pdb 61 RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKL-- 104 usage_00383.pdb 61 RFTGSGSGTAFTLTLNSVQAEDLALYYCQQHYSTPLTFGAGTKLEL 106 usage_00384.pdb 60 RFTASGGGTDFSFTISSVQGEDLALYYCQQHYTTPWTFGGGTKLEI 105 usage_00413.pdb 61 RFIGSESGTDFTLTISNMQSEDLADYFCQQYSSYPLAFGAGTKLEL 106 RFtgSgs TdFt Ti Q Dla Y C Q P fG gtk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################