################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:44 2021 # Report_file: c_1336_22.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00038.pdb # 2: usage_00042.pdb # 3: usage_00069.pdb # 4: usage_00089.pdb # 5: usage_00123.pdb # 6: usage_00175.pdb # 7: usage_00176.pdb # 8: usage_00177.pdb # 9: usage_00471.pdb # 10: usage_00621.pdb # 11: usage_00763.pdb # 12: usage_00914.pdb # 13: usage_00935.pdb # 14: usage_00937.pdb # 15: usage_00983.pdb # 16: usage_01017.pdb # 17: usage_01026.pdb # # Length: 52 # Identity: 10/ 52 ( 19.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 52 ( 59.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 52 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00042.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00069.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00089.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00123.pdb 1 -PEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIA- 50 usage_00175.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00176.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00177.pdb 1 SATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAG 52 usage_00471.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00621.pdb 1 TPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIA- 51 usage_00763.pdb 1 YPEEISSV--LTKKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAG 50 usage_00914.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_00935.pdb 1 -PEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 51 usage_00937.pdb 1 -PPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 51 usage_00983.pdb 1 YPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG 52 usage_01017.pdb 1 APEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAG 52 usage_01026.pdb 1 APEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAG 52 p s K ae ylg vT av tVPayfnd QRqatkDAg IA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################