################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:22 2021 # Report_file: c_0954_28.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00065.pdb # 4: usage_00183.pdb # 5: usage_00184.pdb # 6: usage_00202.pdb # # Length: 40 # Identity: 11/ 40 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 40 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 40 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -LCFKATLKKF--PLKFPVKRGCADNCPKNSALLKYVCCS 37 usage_00028.pdb 1 --CYKMTMRAAPM---VPVKRGCIDVCPKSSLLIKYM--- 32 usage_00065.pdb 1 --CYKMFMMSDLT---IPVKRGCIDVCPKNSLLVKYVCCN 35 usage_00183.pdb 1 -KCVKMTD----------VIRGCIDICPKSSADVEVLCCD 29 usage_00184.pdb 1 DKCVKMTIKKLPS-----VIRGCIDICPKSSADVEVLCCD 35 usage_00202.pdb 1 NLCYKMFMVATPK---VPVKRGCIDVCPKSSLLVKYVCCN 37 C Km V RGCiD CPK S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################