################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:33 2021 # Report_file: c_0649_10.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00242.pdb # 6: usage_00269.pdb # 7: usage_00270.pdb # 8: usage_00279.pdb # 9: usage_00284.pdb # 10: usage_00307.pdb # 11: usage_00308.pdb # 12: usage_00309.pdb # 13: usage_00310.pdb # # Length: 69 # Identity: 52/ 69 ( 75.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 69 ( 76.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 69 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRASFKNAYTPVAVTNYETKLLST 58 usage_00002.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRASFKNAYTPVAVTNYETKLLST 58 usage_00003.pdb 1 -FSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRASFKNAYTPVAVTNYETKLLST 57 usage_00004.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRASFKNAYTPVAVTNYETKLLST 58 usage_00242.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRFSFKNAYTPVAVTNYETKLLST 58 usage_00269.pdb 1 IFSIKNIVK--NK-YCSQIFSSFRENTMLLADIYKPWRFSFKNAYTPVAVTNYETKLLST 57 usage_00270.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPWRFSFKNAYTPVAVTNYETKLLST 58 usage_00279.pdb 1 IFSIKNIVS----QYCSQIFSSFMKNTMLLADIYKPWRFSFENAYTPVAVTNYETKLLST 56 usage_00284.pdb 1 IFSIKNIVS-QNK-YCSQIFSSFMKNTMLLADIYKPWRFSFENAYTPVAVTNYETKLLST 58 usage_00307.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYK------KNAYTPVAVTNYETKLLST 52 usage_00308.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYK------KNAYTPVAVTNYETKLLST 52 usage_00309.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPARFSFKNAYTPVAVTNYETKLLST 58 usage_00310.pdb 1 IFSIKNIVSK-NK-YCSQIFSSFRENTMLLADIYKPARFSFKNAYTPVAVTNYETKLLST 58 FSIKNIVs YCSQIFSSF NTMLLADIYK NAYTPVAVTNYETKLLST usage_00001.pdb 59 SSFWKFIS- 66 usage_00002.pdb 59 SSFWKFIS- 66 usage_00003.pdb 58 SSFWKFIS- 65 usage_00004.pdb 59 SSFWKFISR 67 usage_00242.pdb 59 SSFWKFIS- 66 usage_00269.pdb 58 SSFWKFISR 66 usage_00270.pdb 59 SSFWKFIS- 66 usage_00279.pdb 57 SSFWKFISR 65 usage_00284.pdb 59 SSFWKFISR 67 usage_00307.pdb 53 SSFWKFISR 61 usage_00308.pdb 53 SSFWKFISR 61 usage_00309.pdb 59 SSFWKFISR 67 usage_00310.pdb 59 SSFWKFIS- 66 SSFWKFIS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################