################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:26 2021 # Report_file: c_0435_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00077.pdb # 2: usage_00295.pdb # 3: usage_00296.pdb # 4: usage_00297.pdb # 5: usage_00410.pdb # 6: usage_00663.pdb # 7: usage_00664.pdb # 8: usage_00665.pdb # 9: usage_00668.pdb # 10: usage_00724.pdb # 11: usage_00725.pdb # 12: usage_00726.pdb # # Length: 106 # Identity: 57/106 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/106 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/106 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 ---LECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 57 usage_00295.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00296.pdb 1 GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 60 usage_00297.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00410.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00663.pdb 1 -KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 59 usage_00664.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00665.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00668.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00724.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00725.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 usage_00726.pdb 1 ---LQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 57 LqiFnkRTqeKfALKmLqDcPKARrEVelHWrASqcPHIVrIvDVYENlyaGrkCLL usage_00077.pdb 58 IIMECMEGGELFSRIQE----AFTEREAAEIMRDI----------- 88 usage_00295.pdb 58 IVMECLDGGELFSRIQDRG--AFTEREASEIMKSIGEAIQYLHSIN 101 usage_00296.pdb 61 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 106 usage_00297.pdb 58 IVMECLDGGELFSRIQDR---AFTEREASEIMKSIGEAIQYLHSIN 100 usage_00410.pdb 58 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 103 usage_00663.pdb 60 IVMECLDGGELFSRIQDR---AFTEREASEIMKSIGEAIQYLHSIN 102 usage_00664.pdb 58 IVMECLDGGELFSRIQD----RFTEREASEIMKSI----------- 88 usage_00665.pdb 58 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG---------- 93 usage_00668.pdb 58 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 103 usage_00724.pdb 58 IVMECLDGGELFSRIQD----AFTEREASEIMKSIGEAIQYLHSIN 99 usage_00725.pdb 58 IVMECLDGGELFSRIQD----AFTEREASEIMKSI----------- 88 usage_00726.pdb 58 IVMECLDGGELFSRIQD----AFTEREASEIMKSIGEAIQYLHSIN 99 IvMECldGGELFSRIQd aFTEREAsEIMksI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################