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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:30:29 2021
# Report_file: c_1010_25.html
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#====================================
# Aligned_structures: 6
#   1: usage_00113.pdb
#   2: usage_00146.pdb
#   3: usage_00147.pdb
#   4: usage_00181.pdb
#   5: usage_00539.pdb
#   6: usage_00629.pdb
#
# Length:         66
# Identity:       10/ 66 ( 15.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     27/ 66 ( 40.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           17/ 66 ( 25.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00113.pdb         1  -HIVALCVLKGGYKFFADLLDYIKALNRNSDRSI---PMTVDFIRL-KSYCND--QST-G   52
usage_00146.pdb         1  -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRLKSYQNDN--ST--G   55
usage_00147.pdb         1  -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRL-KS-------Y-QG   50
usage_00181.pdb         1  -ELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRL-KSY-QNDNST--G   55
usage_00539.pdb         1  EEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRV-KSY-CNDQST--G   56
usage_00629.pdb         1  ---HILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRV-KSY-CNDQST--G   53
                              hi C LKGsrgFF  L   l  i  yS  e     f ehyvR  ks          G

usage_00113.pdb        53  DIKVIG   58
usage_00146.pdb        56  QLTVLS   61
usage_00147.pdb        51  QLTVLS   56
usage_00181.pdb        56  QLTVL-   60
usage_00539.pdb        57  TLEIVS   62
usage_00629.pdb        54  TLEIV-   58
                            l    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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