################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:35:04 2021 # Report_file: c_0435_26.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00040.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # 4: usage_00091.pdb # 5: usage_00092.pdb # 6: usage_00093.pdb # 7: usage_00120.pdb # 8: usage_00144.pdb # 9: usage_00180.pdb # 10: usage_00192.pdb # 11: usage_00204.pdb # 12: usage_00220.pdb # 13: usage_00221.pdb # 14: usage_00238.pdb # 15: usage_00385.pdb # 16: usage_00391.pdb # 17: usage_00437.pdb # 18: usage_00465.pdb # 19: usage_00479.pdb # 20: usage_00583.pdb # 21: usage_00587.pdb # 22: usage_00588.pdb # 23: usage_00612.pdb # 24: usage_00613.pdb # 25: usage_00627.pdb # 26: usage_00646.pdb # 27: usage_00688.pdb # # Length: 115 # Identity: 9/115 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/115 ( 13.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/115 ( 35.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 ---KIAVQKGTRIRRAAKKIPKYFV-E-----DV-DRFKQEIEIMKSLDHPNIIRLYETF 50 usage_00086.pdb 1 -EVILCKDKITGQECAVKVISKRQV-T-----DK-ESLLREVQLLKQLDHPNIMKLYEFF 52 usage_00087.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00091.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00092.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00093.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00120.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00144.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00180.pdb 1 -EVILCKDKITGQECAVKVISK----------DK-ESLLREVQLLKQLDHPNIMKLYEFF 48 usage_00192.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNI-KLYEFF 55 usage_00204.pdb 1 ---LKCKDRITQQEYAVKVINKASA-K--N--KT-STILREVELLKKLDHPNIMKLFEIL 51 usage_00220.pdb 1 ----LVEERSSGLERVIKTINKD---RSQV--PM-EQIEAEIEVLKSLDHPNIIKIFEVF 50 usage_00221.pdb 1 ----LVEERSSGLERVIKTINKD---RSQV--PM-EQIEAEIEVLKSLDHPNIIKIFEVF 50 usage_00238.pdb 1 ----GAVSLQNGKEYAVKIIEKQAGHS---RSRV-FREVETLYQC--QGNKNILELIEFF 50 usage_00385.pdb 1 GEVLLCRDKVTHVERAIKIIRK----------SSNSKLLEEVAVLKLLDHPNIMKLYDFF 50 usage_00391.pdb 1 -EVILCKDKITGQECAVKVISK--V-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 53 usage_00437.pdb 1 GEVLKCKDRITQQEYAVKVINKA-S-AKNK--DT-STILREVELLKKLDHPNIMKLFEIL 55 usage_00465.pdb 1 GEVLKCKDRITQQEYAVKVINKA-S-AKNK--DT-STILREVELLKKLDHPNIMKLFEIL 55 usage_00479.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNI-KLYEFF 55 usage_00583.pdb 1 SEVILAEDKRTQKLVAIKCIA-----------SM-EN---EIAVLHKIKHPNIVALDDIY 45 usage_00587.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00588.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00612.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00613.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00627.pdb 1 ---LKCKDRITQQEYAVKVINKA-S-AKNK--DT-STILREVELLKKLDHPNIMKLFEIL 52 usage_00646.pdb 1 GEVILCKDKITGQECAVKVISKRQV-KQKT--DK-ESLLREVQLLKQLDHPNIMKLYEFF 56 usage_00688.pdb 1 -EVILSRDKHTGHEYAIKVISKKHV-KRKT--DK-ESLLREVELLKMLDHINIMKLYEFF 55 K I e h NI usage_00040.pdb 51 EDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARI--------------- 86 usage_00086.pdb 53 EDKGYFYLVMEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 103 usage_00087.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00091.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00092.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00093.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00120.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00144.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00180.pdb 49 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARI--------------- 84 usage_00192.pdb 56 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYHKNK- 105 usage_00204.pdb 52 EDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARI--------------- 87 usage_00220.pdb 51 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 105 usage_00221.pdb 51 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 105 usage_00238.pdb 51 EDDTRFYLVFEKLQGGSILAHIQKQK----HFNEREASRVVRDVAAALDFLHTKG 101 usage_00385.pdb 51 EDKRNYYLVMECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKHN 101 usage_00391.pdb 54 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 104 usage_00437.pdb 56 EDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARI--------------- 91 usage_00465.pdb 56 EDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARI--------------- 91 usage_00479.pdb 56 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYHKNK- 105 usage_00583.pdb 46 ESGGHLYLIMQLVSGGELFDRIVEKG----FYTERDASRLIFQVLDAVKYLHDLG 96 usage_00587.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00588.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00612.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00613.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00627.pdb 53 EDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARI--------------- 88 usage_00646.pdb 57 EDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK 107 usage_00688.pdb 56 EDNNYYYLVSDVYTGGELFDEIISRK----RFYEIDAARIIKQILSGITYMHKNN 106 Ed Y v GGel i E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################