################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:05 2021 # Report_file: c_0651_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00158.pdb # 4: usage_00267.pdb # 5: usage_00461.pdb # 6: usage_00462.pdb # 7: usage_00463.pdb # # Length: 123 # Identity: 28/123 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/123 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/123 ( 39.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 GLHGFHIHENPSCEPKEKEGKLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 usage_00015.pdb 1 GLHGFHIHENPSCEPKEQEGKLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 usage_00158.pdb 1 GLHGFHVHEFGDNTA---------GATSAGPHFNPL-------------HVGDLGNVTAD 38 usage_00267.pdb 1 GLHGFHVHEFGDNTA---------GCTSAGPHFNPLSR-KHGGPKDEERHVGDLGNVTAD 50 usage_00461.pdb 1 GLHGFHIHENPSCEPKEEEGKLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 usage_00462.pdb 1 GLHGFHIHENPSCEPKEEEGKLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 usage_00463.pdb 1 GLHGFHIHENPSCEPKEQEGQLTAG-LGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVL 59 GLHGFH HE G AG H P H GDL T usage_00014.pdb 60 HDGTATNPVLAPRLKHLD----DVRGHSIMIHTGGDNHS-DHPA------PLGGGGPRMA 108 usage_00015.pdb 60 HDGTATNPVLAPRLKHLD----DVRGHSIMIHTGGDNHS-DHPA------PLGGGGPRMA 108 usage_00158.pdb 39 KDGVADVSIEDSVISL--SGDHAIIGRTLVVHEKAD--------------------SRLA 76 usage_00267.pdb 51 KDGVADVSIEDSVISL--SGDHSIIGRTLVVHEKADDLGKG---GNEESTKTGNAGSRLA 105 usage_00461.pdb 60 HDGTATNPVLAPRLKHLD----DVRGHSIMIHTGGDNHS-DHPA------PLGGGGPRMA 108 usage_00462.pdb 60 HDGTATNPVLAPRLKHLD----DVRGHSIMIHTGGDNHS-DHPA------PLGGGGPRMA 108 usage_00463.pdb 60 HDGTATNPVLAPRLKHLD----DVRGHSIMIHTGGDNHS-DHPA------PLGGGGPRMA 108 DG A G H D R A usage_00014.pdb 109 CGV 111 usage_00015.pdb 109 CGV 111 usage_00158.pdb 77 AGV 79 usage_00267.pdb 106 CGV 108 usage_00461.pdb 109 CGV 111 usage_00462.pdb 109 CGV 111 usage_00463.pdb 109 CGV 111 cGV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################