################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:03 2021 # Report_file: c_1278_26.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00038.pdb # 2: usage_00152.pdb # 3: usage_00164.pdb # 4: usage_00165.pdb # 5: usage_00183.pdb # 6: usage_00184.pdb # 7: usage_00199.pdb # 8: usage_00210.pdb # 9: usage_00219.pdb # 10: usage_00272.pdb # 11: usage_00295.pdb # # Length: 44 # Identity: 12/ 44 ( 27.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 44 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 44 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -LGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAA- 41 usage_00152.pdb 1 IMGLDVWEHAYFLKFQNRRPDYIKEFWN-VVNWDEAAARFAAK- 42 usage_00164.pdb 1 IMGLDVWEHAYFLKFQNRRPDYIKEFWN-VVNWDEAAARFAAK- 42 usage_00165.pdb 1 IMGLDVWEHAYFLKFQNRRPDYIKEFWN-VVNWDEAAARFAAK- 42 usage_00183.pdb 1 VFGVDMWEHAYYLQYLNDKASYAKGIWN-VINWAEAENRYIAG- 42 usage_00184.pdb 1 VFGVDMWEHAYYLQYLNDKASYAKGIWN-VINWAEAENRYIAG- 42 usage_00199.pdb 1 LATMDVWEHAYYLDYLNLRKKYIDVFLEHLLNWDFVLGRLEDAG 44 usage_00210.pdb 1 IMGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAA-- 41 usage_00219.pdb 1 IMGLDVWEHAYFLKFQNRRPDYIKEFWN-VVNWDEAAARFAAK- 42 usage_00272.pdb 1 -LGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAA-- 40 usage_00295.pdb 1 IMGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAK- 42 g D WEHAY L N Y wn v NW e R a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################