################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:51 2021 # Report_file: c_0581_42.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00052.pdb # 2: usage_00347.pdb # 3: usage_00348.pdb # 4: usage_00408.pdb # 5: usage_00409.pdb # 6: usage_00410.pdb # # Length: 81 # Identity: 33/ 81 ( 40.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 81 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 81 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 ---PIAVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVA 57 usage_00347.pdb 1 -----AIGSLETKGFPPILAAADAMVKAGRITIVSYMRAGSARFAVNIRGDVSEVKTAMD 55 usage_00348.pdb 1 -----AIGSLETKGFPPILAAADAMVKAGRITIVSYMRAGSARFAVNIRGDVSEVKTAMD 55 usage_00408.pdb 1 -----AVGSIETIGFPGILAAADAMVKAGRITIVGYIRAGSARFTLNIRGDVQEVKTAMA 55 usage_00409.pdb 1 -----AVGSIETIGFPGILAAADAMVKAGRITIVGYIRAGSARFTLNIRGDVQEVKTAMA 55 usage_00410.pdb 1 MSAQSAVGSIETIGFPGILAAADAMVKAGRITIVGYIRAGSARFTLNIRGDVQEVKTAMA 60 A Gs ET GFP ilaAADAMVKAgRiTiV Y raGSaRf niRGDV EVktam usage_00052.pdb 58 AGVDSAKRVNGGEVLSTHIIA 78 usage_00347.pdb 56 AGIEAAKNTPGGTLETWVIIP 76 usage_00348.pdb 56 AGIEAAKNTPGGTLETWVIIP 76 usage_00408.pdb 56 AGIDAINRTEGADVKTWVIIP 76 usage_00409.pdb 56 AGIDAINRTEGADVKTWVIIP 76 usage_00410.pdb 61 AGIDAINRTEGADVKTWVIIP 81 AGi a t G twvIIp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################