################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:28 2021 # Report_file: c_0699_140.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00524.pdb # 2: usage_01377.pdb # 3: usage_01511.pdb # 4: usage_01536.pdb # 5: usage_01537.pdb # # Length: 76 # Identity: 7/ 76 ( 9.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 76 ( 22.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 76 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00524.pdb 1 --IKARVSGQNELIIEAEREIT-E--P--GVKYLTQ--RPKYVRKVIRLPYNVAKDAEIS 51 usage_01377.pdb 1 DELTVK-TKDGVVEITGKHAAR-YIS--------------RCFTRKYTLPPGVDP-TQVS 43 usage_01511.pdb 1 --IILNAV-GDTLEIRAKRSPLMI--TESERIIYSEIPEEEEIYRTIKLPATVKE-ENAS 54 usage_01536.pdb 1 --ISVRLSAQNELIINAEREIQ-Y--I--GTKYATQ--RPLKIHKVIRLPVKVKRDSQVT 51 usage_01537.pdb 1 --ISVRLSAQNELIINAEREIQ-Y--I--GTKYATQ--RPLKIHKVIRLPVKVRD-SQVT 50 i l I a r i LP V usage_00524.pdb 52 GK-YENGVLTIRIP-- 64 usage_01377.pdb 44 SSLSPEGTLTVEAP-- 57 usage_01511.pdb 55 AK-FENGVLSVILP-- 67 usage_01536.pdb 52 DK-YENGVLTIRIP-- 64 usage_01537.pdb 51 DK-YENGVLTIRIPVE 65 k enGvLt P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################