################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:13 2021 # Report_file: c_0786_141.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00032.pdb # 3: usage_00194.pdb # 4: usage_00860.pdb # # Length: 66 # Identity: 1/ 66 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 66 ( 19.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 66 ( 37.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 VTI-GIKPVEETLAEAREHLAL-GFR-VLKVKL-C--GDEE-QDFERLRRLHETLAGRAV 53 usage_00032.pdb 1 ATV-PAVGPEEAARIVASS--G--CT-TAKVKV-A------ENDVARVEAVRDALGPRGR 47 usage_00194.pdb 1 ATV-PAVGPEEAARIVASS--G--CT-TAKVKVAERGQSEA-NDVARVEAVRDALGPRGR 53 usage_00860.pdb 1 GVAAIGLGRWAYV-ADAYT--KSEKLKLVTCYS----RTED-KREKFGKR--------YN 44 t g ee a kvk d r usage_00007.pdb 54 VRVDPN 59 usage_00032.pdb 48 VRIDV- 52 usage_00194.pdb 54 VRIDV- 58 usage_00860.pdb 45 CAGDA- 49 vr D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################