################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:52 2021 # Report_file: c_0129_14.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00065.pdb # 2: usage_00268.pdb # 3: usage_00288.pdb # 4: usage_00289.pdb # 5: usage_00290.pdb # 6: usage_00291.pdb # # Length: 194 # Identity: 26/194 ( 13.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/194 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/194 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 QVCVVTGASRGIGRGIALQLCKAGATVYITGR-HLDTLRVVAQEAQS-LG-GQCVPVVCD 57 usage_00268.pdb 1 KLAVVTAGSSGLGFASALELARNGARLLLFSR-NREKLEAAASRIASLVSGAQVDIVAGD 59 usage_00288.pdb 1 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LG-VKVLVVKAN 58 usage_00289.pdb 1 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LG-VKVLVVKAN 58 usage_00290.pdb 1 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LG-VKVLVVKAN 58 usage_00291.pdb 1 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LG-VKVLVVKAN 58 k a VTg SrG G a A La nG i A ei lg v V usage_00065.pdb 58 SSQESEVRSLFEQVDREQQG-RLDVLVNNA-YA-GVQTILNTRNKAFWETPASMWDDINN 114 usage_00268.pdb 60 IREPGDIDRLFEKARD-L--GGADILVYSTGG-PR--------PGRFMELGVEDWDESYR 107 usage_00288.pdb 59 VGQPAKIKEMFQQIDETF--GRLDVFVNNAAS-GV--------LRPVMELEETHWDWTMN 107 usage_00289.pdb 59 VGQPAKIKEMFQQIDETF--GRLDVFVNNAAS-GV--------LRPVMELEETHWDWTMN 107 usage_00290.pdb 59 VGQPAKIKEMFQQIDETF--GRLDVFVNNAAS-GV--------LRPVMELEETHWDWTMN 107 usage_00291.pdb 59 VGQPAKIKEMFQQIDETF--GRLDVFVNNAAS-GV--------LRPVMELEETHWDWTMN 107 qp i F q d rlDv Vnna mEl WD n usage_00065.pdb 115 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFN-VPYGVGKAACDKLAADCAHE 173 usage_00268.pdb 108 LLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALE 167 usage_00288.pdb 108 INAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVE 167 usage_00289.pdb 108 INAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVE 167 usage_00290.pdb 108 INAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVE 167 usage_00291.pdb 108 INAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVE 167 a fc aA lM G G iV IsS gs ry n gv kaa l r lA E usage_00065.pdb 174 LRRHGVSCVSLWPG 187 usage_00268.pdb 168 LAPHGVTVNAVLPS 181 usage_00288.pdb 168 LSPKQIIVNAVSGG 181 usage_00289.pdb 168 LSPKQIIVNAVSGG 181 usage_00290.pdb 168 LSPKQIIVNAVSGG 181 usage_00291.pdb 168 LSPKQIIVNAVSGG 181 L p vnav g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################