################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:15 2021 # Report_file: c_0981_20.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00086.pdb # 2: usage_00111.pdb # 3: usage_00112.pdb # 4: usage_00113.pdb # 5: usage_00114.pdb # 6: usage_00133.pdb # 7: usage_00134.pdb # 8: usage_00135.pdb # 9: usage_00136.pdb # 10: usage_00137.pdb # 11: usage_00216.pdb # 12: usage_00311.pdb # # Length: 57 # Identity: 2/ 57 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 57 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 57 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 LIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWLNSCD-------- 49 usage_00111.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRR- 49 usage_00112.pdb 1 -ISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRR- 48 usage_00113.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00114.pdb 1 -ISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRR- 48 usage_00133.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00134.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00135.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00136.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRR- 49 usage_00137.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00216.pdb 1 NISYSD-------KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 50 usage_00311.pdb 1 -ISYKR-------SSFFIKI-R--ESTIGFKLPSYRAAKKLWKVCVEHHTFFR---- 42 Isy f Ik d v fn r k i c h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################