################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:43 2021 # Report_file: c_1415_105.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00672.pdb # 2: usage_00673.pdb # 3: usage_00684.pdb # 4: usage_00685.pdb # 5: usage_00686.pdb # 6: usage_00687.pdb # 7: usage_00701.pdb # 8: usage_00702.pdb # 9: usage_00819.pdb # 10: usage_00897.pdb # 11: usage_00898.pdb # 12: usage_00904.pdb # 13: usage_00984.pdb # 14: usage_00985.pdb # 15: usage_01011.pdb # 16: usage_01150.pdb # 17: usage_01156.pdb # 18: usage_01257.pdb # 19: usage_01258.pdb # 20: usage_01306.pdb # 21: usage_01388.pdb # 22: usage_01389.pdb # 23: usage_01390.pdb # 24: usage_01391.pdb # 25: usage_01392.pdb # 26: usage_01398.pdb # # Length: 71 # Identity: 6/ 71 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 71 ( 14.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 71 ( 62.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00672.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00673.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00684.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00685.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00686.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00687.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00701.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00702.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00819.pdb 1 -TLACDLWLALDYVASQASVMNLLLISFDRYFSVTRPLSYRAKRTPRRAALMIGLAWLVS 59 usage_00897.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 60 usage_00898.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_00904.pdb 1 -AVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWVLS 59 usage_00984.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 60 usage_00985.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 60 usage_01011.pdb 1 -SFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_01150.pdb 1 -NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVS 59 usage_01156.pdb 1 ------------------SIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILS 42 usage_01257.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMT--------------- 45 usage_01258.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMT--------------- 45 usage_01306.pdb 1 -QVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFS 59 usage_01388.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_01389.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_01390.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_01391.pdb 1 -SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 59 usage_01392.pdb 1 --------------CVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 46 usage_01398.pdb 1 GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS 60 S L i DRY t p y T usage_00672.pdb 60 ALV-------- 62 usage_00673.pdb 60 ALV-------- 62 usage_00684.pdb 60 ALVS------- 63 usage_00685.pdb 60 ALVS------- 63 usage_00686.pdb 60 ALVSF------ 64 usage_00687.pdb 60 ALVSF------ 64 usage_00701.pdb 60 ALVSFLPIMMH 70 usage_00702.pdb 60 ALVSFLPIMMH 70 usage_00819.pdb 60 FVLWAPAIL-- 68 usage_00897.pdb 61 ALVSF------ 65 usage_00898.pdb 60 ALVS------- 63 usage_00904.pdb 60 FVLW------- 63 usage_00984.pdb 61 ALVSFLPIMMH 71 usage_00985.pdb 61 ALVSFLPIMMH 71 usage_01011.pdb 60 ALVS------- 63 usage_01150.pdb 60 GLTSFLPIQMH 70 usage_01156.pdb 43 S---------- 43 usage_01257.pdb ----------- usage_01258.pdb ----------- usage_01306.pdb 60 ISISLPPFFWR 70 usage_01388.pdb 60 ALVS------- 63 usage_01389.pdb 60 ALVS------- 63 usage_01390.pdb 60 ALVS------- 63 usage_01391.pdb 60 ALV-------- 62 usage_01392.pdb 47 ALVS------- 50 usage_01398.pdb 61 ALV-------- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################