################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:44 2021 # Report_file: c_1113_8.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00389.pdb # 2: usage_00396.pdb # 3: usage_00560.pdb # 4: usage_00565.pdb # 5: usage_00573.pdb # 6: usage_00576.pdb # 7: usage_00593.pdb # 8: usage_00597.pdb # 9: usage_00606.pdb # 10: usage_00609.pdb # 11: usage_00887.pdb # # Length: 123 # Identity: 89/123 ( 72.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/123 ( 72.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/123 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00389.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00396.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00560.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00565.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00573.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00576.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00593.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00597.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00606.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00609.pdb 1 NDELMVTLNNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 60 usage_00887.pdb 1 ----------------------------FPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH 32 FPQFDNLVEEYSIIGKHSVKIFSMLEKFGQFH usage_00389.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00396.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00560.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00565.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00573.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00576.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00593.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00597.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00606.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00609.pdb 61 WFYGISIGQFLSCFKRVFI--TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY- 117 usage_00887.pdb 33 WFYGISIGQFLSCFKRVFIKKTRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLYK 92 WFYGISIGQFLSCFKRVFI TRVDEILWLLYQEVYCQFSTALDKKFKMIMAMTMFCLY usage_00389.pdb --- usage_00396.pdb --- usage_00560.pdb --- usage_00565.pdb --- usage_00573.pdb --- usage_00576.pdb --- usage_00593.pdb --- usage_00597.pdb --- usage_00606.pdb --- usage_00609.pdb --- usage_00887.pdb 93 FDI 95 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################