################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:07 2021 # Report_file: c_0479_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00009.pdb # 2: usage_00011.pdb # 3: usage_00014.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00026.pdb # 9: usage_00045.pdb # 10: usage_00046.pdb # # Length: 78 # Identity: 2/ 78 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 78 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 78 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 STVYVSNLPFSLTNNDLYRIFSKYGKVV-KVTIMK-DKDTRKSKGVAFILFLDKDSAQNC 58 usage_00011.pdb 1 WILFVTSIHEEAQEDEIQEKFCDYGEIK-NIHLNLFS------KGYALVEYETHKQALAA 53 usage_00014.pdb 1 --LFVRNLSYTSSEEDLEKLFSAYGPLS-ELHYPI-DSLTKKPKGFAFVTFMFPEHAVKA 56 usage_00020.pdb 1 SGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMR-DPDTGNSKGYAFINFASFDASDAA 59 usage_00021.pdb 1 -TVYVGGLDEKVSEPLLWELFLQAGPVV-NTHMPK-DRVTGQHQGYGFVEFLSEEDADYA 57 usage_00022.pdb 1 CTVYCGGVTSGLTEQLMRQTFSPFGQIM-EIRVFP-D------KGYSFVRFNSHESAAHA 52 usage_00023.pdb 1 -LIYCSNLPFSTAKSDLYDLFETIGKVN-NAELRY-DSK-GAPTGIAVVEYDNVDDADVC 56 usage_00026.pdb 1 RVLYVGNLDKAITEDILKQYFQVGGPIA-NIKIMI-DKNKN--VNYAFVEYHQSHDANIA 56 usage_00045.pdb 1 RTLFVGNLETKVTEELLFELFHQAGPVI-KVKIPK-DKD-GKPKQFAFVNFKHEVSVPYA 57 usage_00046.pdb 1 RTLFVGNLETKVTEELLFELFHQAGPVI-KVKIPK-DKD-GKPKQFAFVNFKHEVSVPYA 57 F G d usage_00009.pdb 59 TRAINNKQLFGRVIKASI 76 usage_00011.pdb 54 KEALNGAEIMGQTIQVD- 70 usage_00014.pdb 57 YAEVDGQVFQGRMLHVLP 74 usage_00020.pdb 60 IEAMNGQYLCNRPITVSY 77 usage_00021.pdb 58 IKIMDMIKLYGKPIRVNK 75 usage_00022.pdb 53 IVSVNGTTIEGHVVKCYW 70 usage_00023.pdb 57 IERLNNYNYGGCDLDISY 74 usage_00026.pdb 57 LQTLNGKQIENNIVKINW 74 usage_00045.pdb 58 MNLLNGIKLYGRPIKIQF 75 usage_00046.pdb 58 MNLLNGIKLYGRPIKIQF 75 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################