################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:44 2021 # Report_file: c_0540_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00008.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00018.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00030.pdb # # Length: 152 # Identity: 22/152 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/152 ( 21.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/152 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 SIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMD-PET--EIC--AE--WE 53 usage_00013.pdb 1 ---PSIVVHCVNEIEQRGLTETGLYRIDGCDRTVKELKEKFLRVK-T--VPL--LSKVDD 52 usage_00014.pdb 1 ---PSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVK-T--VPL--LSKVDD 52 usage_00018.pdb 1 ---PMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG-EKADIS--ANVYPD 54 usage_00021.pdb 1 ----WFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQE--E--KLNLDDSQWED 52 usage_00022.pdb 1 ---PMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDG-EKADIS--VNMYED 54 usage_00030.pdb 1 ---PMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDG-EKADIS--VNMYED 54 v C E RGl GlYR G d usage_00008.pdb 54 IKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLH 113 usage_00013.pdb 53 IHAICSLLKDFLRNLKEPLLTFRLNRAF-EAAEITDEDNSIAA-YQAVGELPQANRDTLA 110 usage_00014.pdb 53 IHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLA 112 usage_00018.pdb 55 INIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLR 114 usage_00021.pdb 53 IHVVTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMK 112 usage_00022.pdb 55 INIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLR 114 usage_00030.pdb 55 INIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLR 114 I i LK R L Pl F a LP tl usage_00008.pdb 114 LLMNHLAKVADNHKQNLMTVANLGVVFG---- 141 usage_00013.pdb 111 FL-IHLQRVAQSPHTK--DVANLAKVF----- 134 usage_00014.pdb 113 FLMIHLQRVAQSPHTKM-DVANLAKV------ 137 usage_00018.pdb 115 YLMIHLKKVTMNEKDNFMNAENLGIVF----- 141 usage_00021.pdb 113 VLFGHLTKIVAKASKNLMSTQSLGIV------ 138 usage_00022.pdb 115 YLMAHLKRVTLHEKENLMNAENLGIVF----- 141 usage_00030.pdb 115 YLMAHLKRVTLHEKENLMNAENLGIVFGPTLM 146 L HL v nL V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################