################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:52 2021 # Report_file: c_0277_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00030.pdb # 5: usage_00087.pdb # 6: usage_00218.pdb # 7: usage_00266.pdb # 8: usage_00268.pdb # 9: usage_00269.pdb # # Length: 94 # Identity: 33/ 94 ( 35.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 94 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 94 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 AVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIPD 60 usage_00024.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00025.pdb 1 DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS 60 usage_00030.pdb 1 AVTQS--NKVTVTGENVTLSCRQTNSHNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPD 58 usage_00087.pdb 1 AVTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGAGNLQIGDVPD 60 usage_00218.pdb 1 GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN 60 usage_00266.pdb 1 AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD 60 usage_00268.pdb 1 AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD 60 usage_00269.pdb 1 AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD 60 Q V TG TL C Qt H MyWY QD G L LIhYSyg Gd usage_00001.pdb 61 GYKASRPSQENFSLILELASLSQTAVYFCASRL- 93 usage_00024.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSE- 93 usage_00025.pdb 61 ESTVSRIRTEHFPLTLESARPSHTSQYLCASSE- 93 usage_00030.pdb 59 GYKATRTTQEDFFLTLESASPSQTSLYFCASSDA 92 usage_00087.pdb 61 GYKATRTTQEDFFLLLELASPSQTSLYFCASSD- 93 usage_00218.pdb 61 GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASRE- 93 usage_00266.pdb 61 GYKASRPSQEQFSLILESATPSQTSVYFCASGGG 94 usage_00268.pdb 61 GYKASRPSQENFSLILELATPSQTSVYFCASG-- 92 usage_00269.pdb 61 GYKASRPSQENFSLILELATPSQTSVYFCASG-- 92 R E F L Le A pS Ts Y CAS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################