################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:58 2021 # Report_file: c_1014_8.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00088.pdb # 2: usage_00095.pdb # 3: usage_00096.pdb # 4: usage_00272.pdb # 5: usage_00294.pdb # 6: usage_00295.pdb # 7: usage_00296.pdb # 8: usage_00449.pdb # 9: usage_00450.pdb # # Length: 57 # Identity: 17/ 57 ( 29.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 57 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 57 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 RFRFSI-SCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGT--- 53 usage_00095.pdb 1 ------SISTTRLPREGEQDGVDYYFRSREVFEQAIKDGKLEYAEYV-GNYYGTPLE 50 usage_00096.pdb 1 ------SISTTRLPREGEQDGVDYYFRSREVFEQAIKDGKLEYAEYV-GNYYG---- 46 usage_00272.pdb 1 ----SV-SCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGT--- 49 usage_00294.pdb 1 ----SI-SMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQ 52 usage_00295.pdb 1 ----SI-SMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQ 52 usage_00296.pdb 1 ----SI-SMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQ 52 usage_00449.pdb 1 ----SI-SMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQ 52 usage_00450.pdb 1 ----SI-SMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQ 52 TTR RE E GVDY F FE K N YG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################