################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:57 2021 # Report_file: c_1432_72.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00123.pdb # 2: usage_00128.pdb # 3: usage_00129.pdb # 4: usage_00184.pdb # 5: usage_00185.pdb # 6: usage_00221.pdb # 7: usage_00242.pdb # 8: usage_00312.pdb # 9: usage_00492.pdb # 10: usage_01121.pdb # 11: usage_01478.pdb # 12: usage_01479.pdb # 13: usage_01531.pdb # 14: usage_01532.pdb # # Length: 66 # Identity: 3/ 66 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 66 ( 37.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 66 ( 62.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 --DKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 42 usage_00128.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAR------ 42 usage_00129.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREYIPKI 48 usage_00184.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 44 usage_00185.pdb 1 -----------------PAFGIVSHVIATFAKKPIFGYLPMVYAMVAIGVLGFVVW-A-- 40 usage_00221.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 44 usage_00242.pdb 1 --DKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 42 usage_00312.pdb 1 --DKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 42 usage_00492.pdb 1 -ADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWARE----- 42 usage_01121.pdb 1 --DKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAR------ 40 usage_01478.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREYIPKI 48 usage_01479.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREYI--- 45 usage_01531.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 44 usage_01532.pdb 1 GADKAWEEINRGGIIKV--PRIYYYV----------MRYITPAFLAVLLVVWAREY---- 44 prIyyyV mryitpaflavllVvwar usage_00123.pdb ------ usage_00128.pdb ------ usage_00129.pdb 49 MEE--- 51 usage_00184.pdb ------ usage_00185.pdb 41 ---HHM 43 usage_00221.pdb ------ usage_00242.pdb ------ usage_00312.pdb ------ usage_00492.pdb ------ usage_01121.pdb ------ usage_01478.pdb ------ usage_01479.pdb ------ usage_01531.pdb ------ usage_01532.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################