################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:36 2021 # Report_file: c_0454_25.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00005.pdb # 2: usage_00008.pdb # 3: usage_00233.pdb # 4: usage_00335.pdb # 5: usage_00336.pdb # 6: usage_00337.pdb # 7: usage_00338.pdb # # Length: 96 # Identity: 61/ 96 ( 63.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 96 ( 63.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 96 ( 17.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPIL 60 usage_00008.pdb 1 -GIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPIL 59 usage_00233.pdb 1 -GIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPIL 59 usage_00335.pdb 1 -SIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLS 59 usage_00336.pdb 1 -SIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLS 59 usage_00337.pdb 1 -SIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLS 59 usage_00338.pdb 1 -SIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLS 59 II TIGPASRSVE LKEMIK GMN AR NFSHG HEYHAE I NVR A ESFA P usage_00005.pdb 61 YRPVAVALDTKGPEIRTGL--IKG--SGTAEV-E-- 89 usage_00008.pdb 60 YRPVAVALDTKGPEIRTGL--IKG--SGTAEV-ELK 90 usage_00233.pdb 60 YRPVAVALDTKGPEIRTGL--IKG-----AEVE-LK 87 usage_00335.pdb 60 YRPVAIALDTKGPEIRTGI--LQG--GPESEV-ELV 90 usage_00336.pdb 60 YRPVAIALDTKGPEIRTGIVE--L--VKGSQV-LVT 90 usage_00337.pdb 60 YRPVAIALDTKGPEIRTGI--LQG--GPESEV-E-- 88 usage_00338.pdb 60 YRPVAIALDTKGPEIRTGP--ESEVE---------- 83 YRPVA ALDTKGPEIRTG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################