################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:34:41 2021 # Report_file: c_0637_6.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00014.pdb # 5: usage_00015.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00018.pdb # 9: usage_00021.pdb # 10: usage_00029.pdb # 11: usage_00030.pdb # 12: usage_00034.pdb # 13: usage_00035.pdb # 14: usage_00036.pdb # 15: usage_00043.pdb # 16: usage_00051.pdb # # Length: 98 # Identity: 20/ 98 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 98 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 98 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----EEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAS 56 usage_00002.pdb 1 --SQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 58 usage_00003.pdb 1 --SPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHL 58 usage_00014.pdb 1 --SLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAE 58 usage_00015.pdb 1 -----STAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQE 55 usage_00016.pdb 1 ---PEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHL 57 usage_00017.pdb 1 --SQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 58 usage_00018.pdb 1 ---QEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 57 usage_00021.pdb 1 ---PEEAQLWSEAFDELLASKYGLAAFRAFLKSEFSEENIEFWLACEDFK---SPQKLSS 54 usage_00029.pdb 1 --STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVS 58 usage_00030.pdb 1 --SPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHL 58 usage_00034.pdb 1 RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVS 60 usage_00035.pdb 1 RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVS 60 usage_00036.pdb 1 RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVS 60 usage_00043.pdb 1 --SPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 58 usage_00051.pdb 1 --SPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 58 e W L G F FLk E EEN FW CE K usage_00001.pdb 57 KAKKIFAEYIAIQACKEVNLDSYT---REHTKDNLQ-- 89 usage_00002.pdb 59 KAKKIYNEFISVQATKEVNLDSCT---REETSRNML-- 91 usage_00003.pdb 59 KAKAIYEKFIQTDAPKEVNLDFHT---KEVITNS---- 89 usage_00014.pdb 59 KAKQIYEEFIQTEAPKEVNIDHFT---KDITMKNL--- 90 usage_00015.pdb 56 KAKEIYMTFLSSKASSQVNVEGQSRLN----------- 82 usage_00016.pdb 58 KAKAIYEKFIQTDAPKEVNLDFHT---KEVITNS---- 88 usage_00017.pdb 59 KAKKIYNEFISVQATKEVNLDSCT---REETSRN---- 89 usage_00018.pdb 58 KAKKIYNEFISVQATKEVNLDSCT---REETSRNMLEP 92 usage_00021.pdb 55 KARKIYTDFIEKEAPKEINIDFQT---KTLIA------ 83 usage_00029.pdb 59 KAHRIFEEFVDVQAPREVNIDFQT---REATRKNL--- 90 usage_00030.pdb 59 KAKAIYEKFIQTDAPKEVNLDFHT---KEVITNS---- 89 usage_00034.pdb 61 KAHRIFEEFVDVQAPREVNIDFQT---REATRKNLQ-- 93 usage_00035.pdb 61 KAHRIFEEFVDVQAPREVNIDFQT---REATRKNL--- 92 usage_00036.pdb 61 KAHRIFEEFVDVQAPREVNIDFQT---REATRKNL--- 92 usage_00043.pdb 59 KARKIYTDFIEKEAPKEINIDFQT---KTLIAQNI--- 90 usage_00051.pdb 59 KARKIYTDFIEKEAPKEINIDFQT---KTLIAQN---- 89 KA I f A e N d t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################