################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:00 2021 # Report_file: c_1021_20.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00085.pdb # 2: usage_00093.pdb # 3: usage_00283.pdb # 4: usage_00284.pdb # 5: usage_00393.pdb # 6: usage_00522.pdb # 7: usage_00523.pdb # 8: usage_00577.pdb # 9: usage_00611.pdb # 10: usage_00649.pdb # # Length: 61 # Identity: 4/ 61 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 61 ( 50.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 61 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 KKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQL-TKTEEVAHILQEVADA- 58 usage_00093.pdb 1 KKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQL-TKTEEVAHILQEVADA- 58 usage_00283.pdb 1 RRVYVYGEEDQIFSRDFQLWQINNYKPDKVYCVPSADHKIQI-SKVNELAQILQEVANSA 59 usage_00284.pdb 1 RRVYVYGEEDQIFSRDFQLWQINNYKPDKVYCVPSADHKIQI-SKVNELAQILQEVANSA 59 usage_00393.pdb 1 KKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT- 58 usage_00522.pdb 1 KKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT- 58 usage_00523.pdb 1 KKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT- 58 usage_00577.pdb 1 PVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQN- 58 usage_00611.pdb 1 KKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT- 58 usage_00649.pdb 1 KKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQL-TKTEEVAHILQEVADA- 58 y D if fq wqi nYkpdkvy v DHk q k e a ilqeva usage_00085.pdb - usage_00093.pdb - usage_00283.pdb - usage_00284.pdb 60 S 60 usage_00393.pdb - usage_00522.pdb - usage_00523.pdb - usage_00577.pdb - usage_00611.pdb - usage_00649.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################