################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:49 2021 # Report_file: c_0778_39.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00041.pdb # 5: usage_00644.pdb # # Length: 66 # Identity: 9/ 66 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 66 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 66 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 IFTHFSTADEIDTSYFEKQAGRFKAVLAVL-E---EL-P-RYVHVSNSATALWHPDVPGN 54 usage_00003.pdb 1 IFTHFSTADEIDTSYFEKQAGRFKAVLAVL-E---EL-P-RYVHVSNSATALWHPDVPGN 54 usage_00005.pdb 1 IFTHFSTADEIDTSYFEKQAGRFKAVLAVL-E---EL-P-RYVHVSNSATALWHPDVPGN 54 usage_00041.pdb 1 LYTHFATADEVNTDYFSYQYTRFLHMLEWL-P---SR-P-PLVHCANSAASLRFPDRTFN 54 usage_00644.pdb 1 IMSHYPEE---DANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLD 57 i tHf ta dt yf q RFk l l e p vH Nsa l Pd n usage_00002.pdb 55 MIRYG- 59 usage_00003.pdb 55 MIRYG- 59 usage_00005.pdb 55 MIRYG- 59 usage_00041.pdb 55 MVRFG- 59 usage_00644.pdb 58 MVRVGG 63 M R G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################