################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:55 2021 # Report_file: c_1122_25.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00064.pdb # 2: usage_00145.pdb # 3: usage_00243.pdb # 4: usage_00244.pdb # 5: usage_00262.pdb # 6: usage_00263.pdb # 7: usage_00264.pdb # 8: usage_00265.pdb # 9: usage_00266.pdb # 10: usage_00267.pdb # 11: usage_00387.pdb # 12: usage_00388.pdb # # Length: 90 # Identity: 7/ 90 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 90 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 90 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 -APFETHANRIVGFFSKIIGELP-N--IEADVNTFVASHKPRG-VTHDQLNNFRAGFVSY 55 usage_00145.pdb 1 -PQFKAHIARVIGGLDRVISMFDNEDALNADLEHLKSQHDPRG-LDALNFVVFGKALFAT 58 usage_00243.pdb 1 SADFRAHCVRVVNGLDVAINMLNDPAVLNEQLAHLSAQHQARAGVAAAHFDVMAEAFAEV 60 usage_00244.pdb 1 SADFRAHCVRVVNGLDVAINMLNDPAVLNEQLAHLSAQHQARAGVAAAHFDVMAEAFAEV 60 usage_00262.pdb 1 SPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRT-IDPVNFVVFRKALIAT 59 usage_00263.pdb 1 SPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRT-IDPVNFVVFRKALIAT 59 usage_00264.pdb 1 SPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRT-IDPVNFVVFRKALIAT 59 usage_00265.pdb 1 SPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRT-IDPVNFVVFRKALIAT 59 usage_00266.pdb 1 SPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRT-IDPVNFVVFRKALIAT 59 usage_00267.pdb 1 TPAFRAHATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRG-VEAAHYDTVNHAVMMG 59 usage_00387.pdb 1 SPQFKAHIARVIGGLDRVISMFDNEDALNADLEHLKSQHDPRG-LDALNFVVFGKALFAT 59 usage_00388.pdb 1 SPQFKAHIARVIGGLDRVISMFDNEDALNADLEHLKSQHDPRG-LDALNFVVFGKALFAT 59 F aH Rv gld I l l hl qH R a usage_00064.pdb 56 MKAHTDFAGAEAAWGATLDTFFG-MIFSKM 84 usage_00145.pdb 59 VGGQFGVCFDLPAWESCYKVIAM-GI---- 83 usage_00243.pdb 61 MPQVSS-CFSSDSWNRCFARIAN-GIS--- 85 usage_00244.pdb 61 MPQVSS-CFSSDSWNRCFARIAN-GIS--- 85 usage_00262.pdb 60 VAGTFGVCFDVPAWQGCYNIIAK-GI---- 84 usage_00263.pdb 60 VAGTFGVCFDVPAWQGCYNIIAK-GI---- 84 usage_00264.pdb 60 VAGTFGVCFDVPAWQGCYNIIAK-GI---- 84 usage_00265.pdb 60 VAGTFGVCFDVPAWQGCYNIIAK-GI---- 84 usage_00266.pdb 60 VAGTFGVCFDVPAWQGCYNIIAK-GI---- 84 usage_00267.pdb 60 VENVIGSEVFDQDAWKPCLNVITNGIQ--- 86 usage_00387.pdb 60 VGGQFGVCFDLPAWESCYKVIAM-GI---- 84 usage_00388.pdb 60 VGGQFGVCFDLPAWESCYKVIAM-GI---- 84 w gI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################