################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:12 2021 # Report_file: c_1033_55.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00027.pdb # 2: usage_00109.pdb # 3: usage_00114.pdb # 4: usage_00115.pdb # 5: usage_00262.pdb # 6: usage_00430.pdb # 7: usage_00492.pdb # 8: usage_00499.pdb # 9: usage_00504.pdb # 10: usage_00534.pdb # 11: usage_01015.pdb # 12: usage_01016.pdb # # Length: 70 # Identity: 1/ 70 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 70 ( 5.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 70 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 ----KEELMFFLWAPELAPLKSKMIYASSKDAIKKK-FQ--GIKHECQANG-PEDLN-RA 51 usage_00109.pdb 1 --GKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRA-LN--GVSTDVQGTD-FSEVS-YD 53 usage_00114.pdb 1 --GQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKK-LV--GIQVEVQATD-AAEIS-ED 53 usage_00115.pdb 1 --GKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRA-LN--GVSTDVQGTD-FSEVS-YD 53 usage_00262.pdb 1 ---KRSKIVFFTWSPDTAPVRSKMVYASSKDALRRA-LN--GVSTDVQGTD-FSEVS-YD 52 usage_00430.pdb 1 --VLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRK-IN--GIFKSLEITCDINE-F-EE 53 usage_00492.pdb 1 --SKREKLILIQWIPDTARPREKMMYSASRDALSSV-SE--GY-LPIQAND-ESGLD-AE 52 usage_00499.pdb 1 --------IFVQYCPDNAPVRRRMLYASSVRALKAS-LGLES-LFQVQASE-MSDLD-EK 48 usage_00504.pdb 1 ESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS-LV--GVQKYIQATD-LSEAS-RE 55 usage_00534.pdb 1 ------EWIFIAWSPDHSHVRQKMLYAATRATLKKE-FGGGHIKDEVFGTV-KEDVS--- 49 usage_01015.pdb 1 ------KIIIIGWCPDSAPLKTRASFAANFAAVANNLFK--GYHVQVTARD-EDDLD-EN 50 usage_01016.pdb 1 --SKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKK-FT--GIKHEWQVNG-LDDIKDRS 54 w P m y usage_00027.pdb 52 CIAEKLGG-- 59 usage_00109.pdb 54 SVLERV---- 59 usage_00114.pdb 54 AVSERAKK-- 61 usage_00115.pdb 54 SVLERV---- 59 usage_00262.pdb 53 SVLEDVSRG- 61 usage_00430.pdb 54 ELKAIILNT- 62 usage_00492.pdb 53 EIIRKVRLHR 62 usage_00499.pdb 49 SVKSDLMSNQ 58 usage_00504.pdb 56 AVEEKLRATD 65 usage_00534.pdb ---------- usage_01015.pdb 51 ELLMKISNA- 59 usage_01016.pdb 55 TLGEKLG--- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################