################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:17 2021 # Report_file: c_1442_116.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_03530.pdb # 2: usage_03531.pdb # 3: usage_03539.pdb # 4: usage_04054.pdb # 5: usage_04058.pdb # 6: usage_06521.pdb # 7: usage_07720.pdb # 8: usage_11724.pdb # 9: usage_11725.pdb # # Length: 25 # Identity: 4/ 25 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 25 ( 64.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 25 ( 36.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03530.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_03531.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_03539.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_04054.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_04058.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_06521.pdb 1 --VRIKRTE-------SYWYGDVGT 16 usage_07720.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_11724.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 usage_11725.pdb 1 RVRIKDLPDLFYTRTMTYTRGATGT 25 rikdlpd tYtrGatGT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################