################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:35 2021 # Report_file: c_0048_11.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00013.pdb # 2: usage_00037.pdb # 3: usage_00085.pdb # 4: usage_00092.pdb # 5: usage_00093.pdb # 6: usage_00094.pdb # 7: usage_00095.pdb # 8: usage_00100.pdb # 9: usage_00111.pdb # 10: usage_00112.pdb # 11: usage_00113.pdb # 12: usage_00114.pdb # 13: usage_00117.pdb # 14: usage_00133.pdb # 15: usage_00165.pdb # 16: usage_00166.pdb # # Length: 261 # Identity: 14/261 ( 5.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/261 ( 12.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/261 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 QVAIVTGASRGIGRAIALELARRGAMVIGTATTE-AGAEGIGAAFKQAG--LEGRGAVLN 57 usage_00037.pdb 1 RTAFVMGASQGIGKAIALKLADQHFSLVINSRNL-DNIESVKEDILAKHPEASVIVLAGD 59 usage_00085.pdb 1 KVAIITAGGSGMGAASARRLAQDGFAVAILSSSG-K----GEALAKELG----GIGVTGS 51 usage_00092.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGAD 59 usage_00093.pdb 1 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGAD 59 usage_00094.pdb 1 -VALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 56 usage_00095.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00100.pdb 1 -VAIVTGGAQNIGLACVTALAEAGARVIIADLDE-AMATKAVEDLRMEG--HDVSSVVMD 56 usage_00111.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00112.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00113.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00114.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00117.pdb 1 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQ-ELVDRGMAAYKAAG--INAHGYVCD 57 usage_00133.pdb 1 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG--GEAFAVKAD 58 usage_00165.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 usage_00166.pdb 1 KVALVTGASRGIGQAIALELGRLGAVVIGTATSA-SGAEKIAETLKANG--VEGAGLVLD 57 A vtg giG a l g usage_00013.pdb 58 VNDATAVDALVESTLKEFGALNVLVNNAGITQD------QLAMRMKDDEWDAVIDTNLKA 111 usage_00037.pdb 60 MSDQHTRAGIFQKIESQCGRLDVLINNIPGGAP------DTFDNCNIEDMTATFTQKTVA 113 usage_00085.pdb 52 NQSNDDLQKLVDQTLEKWGRIDVLVNSAGHGPR------APILEITDEDWHKGMDTYFLN 105 usage_00092.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT------ALIEDFPTEKWDAILALNLSA 113 usage_00093.pdb 60 LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT------ALIEDFPTEKWDAILALNLSA 113 usage_00094.pdb 57 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD------NLLVRMKDDEWFDVVNTNLNS 110 usage_00095.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD------NLLVRMKDDEWFDVVNTNLNS 111 usage_00100.pdb 57 VTNTESVQNAVRSVHEQEGRVDILVACAGICISE-----VKAEDMTDGQWLKQVDINLNG 111 usage_00111.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNA-----------MKDD-----EWFDVVNTNLNS 101 usage_00112.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNA------------KDD-----EWFDVVNTNLNS 100 usage_00113.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD-NLLVRMKDD-----EWFDVVNTNLNS 111 usage_00114.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD-N-------D-----EWFDVVNTNLNS 104 usage_00117.pdb 58 VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRR------VPMIEMTAAQFRQVIDIDLNA 111 usage_00133.pdb 59 VSQESEVEALFAAVIERWGRLDVLVNNAGITRD------TLLLRMKRDDWQSVLDLNLGG 112 usage_00165.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD------NLLVRMKDDEWFDVVNTNLNS 111 usage_00166.pdb 58 VSSDESVAATLEHIQQHLGQPLIVVNNAGITRD------NLLVRMKDDEWFDVVNTNLNS 111 G vn a usage_00013.pdb 112 VFRLSRAVLRPMMKARGGRIVNITSVV-----GSAGNP--GQVNYAAAKAGVAGMTRALA 164 usage_00037.pdb 114 YIDAIKRASSLMKQNEFGRIINIVGNLWKEPG-----A--NMFTNSMMNAALINASKNIS 166 usage_00085.pdb 106 AVRPARLVVPAMQKQKSGVIINISTAW-----AFEPSA--MFPTSAVFRAGLASFTKIFA 158 usage_00092.pdb 114 VFHGTAAALPHMKKQGFGRIINIASAH-----GLVASA--NKSAYVAAKHGVVGFTKVTA 166 usage_00093.pdb 114 VFHGTAAALPHMKKQGFGRIINIASAH-----GLVASA--NKSAYVAAKHGVVGFTKVTA 166 usage_00094.pdb 111 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 163 usage_00095.pdb 112 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 164 usage_00100.pdb 112 MFRSCQAVGRIMLEQKQGVIVAIGSMS-----GLIVNRPQQQAAYNASKAGVHQYIRSLA 166 usage_00111.pdb 102 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 154 usage_00112.pdb 101 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 153 usage_00113.pdb 112 LYRLSKAVLRGMTKARWGRIINIGSVV------G-GNA--GQTNYAAAKAGLEGFTRALA 162 usage_00114.pdb 105 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 157 usage_00117.pdb 112 PFIVSKAVIPSMIKKGHGKIINICSMM-----SELGRE--TVSAYAAAKGGLKMLTKNIA 164 usage_00133.pdb 113 VFLCSRAAAKIMLKQRSGRIINIASVV-----GEMGNP--GQANYSAAKAGVIGLTKTVA 165 usage_00165.pdb 112 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 164 usage_00166.pdb 112 LYRLSKAVLRGMTKARWGRIINIGSVV-----GAMGNA--GQTNYAAAKAGLEGFTRALA 164 M G I nI g a usage_00013.pdb 165 REIGSRGITVNCVAPGFIDTDM-----TKGLP--QEQQTAL-KTQIPLGRLGSPEDIAHA 216 usage_00037.pdb 167 IQLAPHNITVNCLNPGFIATDRYAE-------------EQI-ASGIPMKRVGSAEETAAL 212 usage_00085.pdb 159 DTYAAENIRMNNVLPGWIDSL----PT----------TEER-RESVPMQRYGKSEEIAAT 203 usage_00092.pdb 167 LETAGQGITANAICPGWVRSPL-----VEKQISARELL----SEKQPSLQFVTPEQLGGT 217 usage_00093.pdb 167 LETAGQGITANAICPGWVR---------------ETAARELLSEKQPSLQFVTPEQLGGT 211 usage_00094.pdb 164 REVGSRAITVNAVAPGFIDTDM-----TRELP--EAQREAL-LGQIPLGRLGQAEEIAKV 215 usage_00095.pdb 165 REVGSRAITVNAVAPGFIDTD----M--------EAQREAL-LGQIPLGRLGQAEEIAKV 211 usage_00100.pdb 167 AEWAPHGIRANAVAPTYIETTL-----TRFGMEKPELYDAW-IAGTPMGRVGQPDEVASV 220 usage_00111.pdb 155 REVGSRAITVNAVAPGFIDTDM-----TRELP--EAQREAL-LGQIPLGRLGQAEEIAKV 206 usage_00112.pdb 154 REVGSRAITVNAVAPGFIDTDM-----TRELP--EAQREAL-LGQIPLGRLGQAEEIAKV 205 usage_00113.pdb 163 REVGSRAITVNAVAPGFIDTDM-----TR-E----AQREAL-LGQIPLGRLGQAEEIAKV 211 usage_00114.pdb 158 REVGSRAITVNAVAPGFIDT----------------QREAL-LGQIPLGRLGQAEEIAKV 200 usage_00117.pdb 165 SEYGEANIQCNGIGPGYIATPQ-----T------HPFDQFI-IAKTPAARWGEAEDLMGP 212 usage_00133.pdb 166 KELASRGITVNAVAPGFIATDM-----TS-----------L-LEVIPLGRYGEAAEVAGV 208 usage_00165.pdb 165 REVGSRAITVNAVAPGFIDTDM-----TRELP--EAQREAL-LGQIPLGRLGQAEEIAKV 216 usage_00166.pdb 165 REVGSRAITVNAVAPGFIDT--------------EAQREAL-LGQIPLGRLGQAEEIAKV 209 I N Pg P usage_00013.pdb 217 VAFLASPQAGYITG-TTLHV- 235 usage_00037.pdb 213 AAFLASEEASYITG-QQISAD 232 usage_00085.pdb 204 VSFLASDGAAYITG-QNLRVD 223 usage_00092.pdb 218 AVFLASDAAAQITG-TTVSV- 236 usage_00093.pdb 212 AVFLASDAAAQITG-TTVSV- 230 usage_00094.pdb 216 VGFLASDGAAYVTG-ATVPVN 235 usage_00095.pdb 212 VGFLASDGAAYVTG-ATVPVN 231 usage_00100.pdb 221 VQFLASDAASLMTG-AIVNVD 240 usage_00111.pdb 207 VGFLASDGAAYVTG-ATVPVN 226 usage_00112.pdb 206 VGFLASDGAAYVTG-ATVPVN 225 usage_00113.pdb 212 VGFLASDGAAYVTG-ATVPVN 231 usage_00114.pdb 201 VGFLASDGAAYVTG-ATVPVN 220 usage_00117.pdb 213 AVFLASDASNFVNG-HILYV- 231 usage_00133.pdb 209 VRFLAADPAAAYITGQVINID 229 usage_00165.pdb 217 VGFLASDGAAYVTG-ATVPVN 236 usage_00166.pdb 210 VGFLASDGAAYVTG-ATVPVN 229 FLAs a g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################