################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:53:23 2021 # Report_file: c_0112_9.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00003.pdb # 2: usage_00025.pdb # 3: usage_00027.pdb # 4: usage_00028.pdb # 5: usage_00030.pdb # 6: usage_00036.pdb # 7: usage_00037.pdb # 8: usage_00038.pdb # 9: usage_00048.pdb # 10: usage_00053.pdb # 11: usage_00065.pdb # 12: usage_00066.pdb # 13: usage_00067.pdb # 14: usage_00095.pdb # 15: usage_00096.pdb # 16: usage_00097.pdb # 17: usage_00104.pdb # 18: usage_00131.pdb # 19: usage_00141.pdb # 20: usage_00164.pdb # 21: usage_00165.pdb # 22: usage_00166.pdb # 23: usage_00175.pdb # 24: usage_00176.pdb # 25: usage_00179.pdb # 26: usage_00193.pdb # 27: usage_00214.pdb # 28: usage_00218.pdb # 29: usage_00219.pdb # 30: usage_00227.pdb # 31: usage_00228.pdb # 32: usage_00237.pdb # 33: usage_00242.pdb # 34: usage_00243.pdb # 35: usage_00244.pdb # 36: usage_00266.pdb # # Length: 120 # Identity: 16/120 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/120 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/120 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 DIVMTQSPSSLTVTTGEKVTMTCKSSQSL-LNSGAQKNYLTWYQQKPGQSPKLLIYWAST 59 usage_00025.pdb 1 --VMTQSPASLVVSLGQRATISCRASESV-DS-Y-GKSFMHWYQQKPGQPPKVLIYIASN 55 usage_00027.pdb 1 -IVMTQSPSSLTVTAGEKVTMSCKSSQSL-LNSGNQKNYLTWYQQKPGQPPKLLIYWAST 58 usage_00028.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASKTI-S------KYLAWYQQKPGKAPKLLIYSGST 53 usage_00030.pdb 1 --QMTQSPSTLSASVGDRVTITCKASENV-D------TYVSWYQQKPGKAPKLLIYGASN 51 usage_00036.pdb 1 DIQMTQSPSSVSASIGDRVTITCRASQGI-D------NWLGWYQQKPGKAPKLLIYDASN 53 usage_00037.pdb 1 -IQMTQSPASQSASLGESVTITCLASQTI-G------TWLAWYQQKPGKSPQLLIYAATS 52 usage_00038.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-N------TAVAWYQQKPGKAPKLLIYSASD 52 usage_00048.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSI-S------SYLNWYQQKPGKAPKLLIYAASS 52 usage_00053.pdb 1 -IKMTQSPSSMYTSLGERVTITCKASQDI-N------SFLTWFLQKPGKSPKTLIYRANR 52 usage_00065.pdb 1 -IVLTQSPATLSLSPGERATLSCMTSTDI-D------DDMNWYQQKPGQAPRLLISEGNT 52 usage_00066.pdb 1 --VLTQSPATLSLSPGERATLSCMTSTDI-D------DDMNWYQQKPGQAPRLLISEGNT 51 usage_00067.pdb 1 --VLTQSPATLSLSPGERATLSCMTSTDI-D------DDMNWYQQKPGQAPRLLISEGNT 51 usage_00095.pdb 1 ELQMTQSPSSLSASVGDRVTITCRASQDI-S------IRLNWYQQKPGKAPKLLIYDAST 53 usage_00096.pdb 1 ELQMTQSPSSLSASVGDRVTITCRASQDI-S------IRLNWYQQKPGKAPKLLIYDAST 53 usage_00097.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDI-N------NYLNWYQQKPGKAPKLLIYYTST 51 usage_00104.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQDV-N------TAVAWYQQKPGKAPKLLIYSASF 52 usage_00131.pdb 1 --LMTQIPASLAVSLGQRATISCKASQSV-DY-E-GDSYMNWYQQKPGQPPKLLIYAASN 55 usage_00141.pdb 1 --VLTQSPAILSVSPGERVSFSCRASQNI-G------TSIHWYQQRTNESPRLIIKYASE 51 usage_00164.pdb 1 -VVMTQTPSSLAMSVGQKVTMSCKSSQSL-LNISNQKNYLAWYQQKPGQSPKLLVYFAST 58 usage_00165.pdb 1 DIVMTQSHKFMSTSVGDRVSITCKASQIV-S------TAVAWYQQKPGQSPKLLIYSASY 53 usage_00166.pdb 1 -IVMTQSPATLSVSPGERATLSCRASQSI-G------NNLHWYQQKPGQAPRLLIYYASQ 52 usage_00175.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQGI-N------NYLNWYQQKPGKAPKLLIYDASK 52 usage_00176.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQSI-A------SYLAWYQQKPGKAPKLLIYDASN 51 usage_00179.pdb 1 -IELTQSPATLSVTPGDSVSLSCRASQSI-S------NNLHWYQQKSHESPRLLIKYVSQ 52 usage_00193.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQDV-S------TAVAWYQQKPGKAPKLLIYSASF 51 usage_00214.pdb 1 -IVMTQSHLSMSTSLGDPVSITCKASQDV-S------TVVAWYQQKPGQSPRRLIYSASY 52 usage_00218.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI-G------ISLSWYQQKPGKAPKLLIYNANN 52 usage_00219.pdb 1 ---VMTQTESPVSAAGGTVTIKCQSSQSVYN------NRLAWYQQKPGQRPKLLIYSAST 51 usage_00227.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSV-S------SAVAWYQQKPGKAPKLLIYSASS 52 usage_00228.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQGI-R------NDLGWYQQKPGKAPKRLIYAASS 53 usage_00237.pdb 1 YIHVTQSPSSLSVSIGDRVTINCQTSQGV-G------SDLHWYQHKPGRAPKLLIHHTSS 53 usage_00242.pdb 1 DIQMTQSSSSFSVSLGDRVTITCKATEDI-Y------NRLAWYQQKPGSAPRLLISGATS 53 usage_00243.pdb 1 -IQLTQSPSSLSASVGDRVTITCQASQDI-R------KYLNWYQQKPGKAPNLLIYDASN 52 usage_00244.pdb 1 -IQMTQSPSSLSASVGDRVTITCQASQDI-S------DYLIWYQQKLGKAPNLLIYDAST 52 usage_00266.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQSV-S------SAVAWYQQKPGKAPKLLIYSASS 52 tq G C s Wyqqk P li usage_00003.pdb 60 RESGVPDRFTGSGSGTDFTLSISGVQAEDLAVYYCQNNY-N--Y-PLTFGAGTKLEL--- 112 usage_00025.pdb 56 LESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNN-E--D-PPTFGAGTKLEMRRA 111 usage_00027.pdb 59 RESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDY-S--Y-PLTFGAGTKLEP--- 111 usage_00028.pdb 54 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHN-E--Y-PLTFGQGTKVEI--- 106 usage_00030.pdb 52 RYTGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCGQSY-N--Y-PFTFGQGTKVEV--- 104 usage_00036.pdb 54 LDTGVPSRFSGSGSGTYFTLTISSLQAEDFAVYFCQQAK-A--F-PPTFGGGTKVDI--- 106 usage_00037.pdb 53 LADGVPSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLY-S--T-PWTFGGGTRLEI--- 105 usage_00038.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHY-T--T-PPTFGQGTKVEI--- 105 usage_00048.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSY-S--T-PNTFGQGTKVEI--- 105 usage_00053.pdb 53 LMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYD-D--F-PLTFGAGTKLDL--- 105 usage_00065.pdb 53 LRPGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSF-N--V-PLTFGQGTKVEI--- 105 usage_00066.pdb 52 LRPGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSF-N--V-PLTFGQGTKVEI--- 104 usage_00067.pdb 52 LRPGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCLQSF-N--V-PLTFGQGTKVEI--- 104 usage_00095.pdb 54 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFN-S--Y-PLTFGGGTKVEI--- 106 usage_00096.pdb 54 LESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFN-S--Y-PLTFGGGTKVEI--- 106 usage_00097.pdb 52 LESGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQGN-T--L-PPTFGAGTKVEI--- 104 usage_00104.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHY-T--T-PPTFGQGTKVEI--- 105 usage_00131.pdb 56 LESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSN-G--D-PYTFGGGTKLDT--- 108 usage_00141.pdb 52 SISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSN-T--W-PYTFGGGTKLEL--- 104 usage_00164.pdb 59 RESGVPDRFIGSGSGTDFTLTISSVQAEDQADYFCQQHY-R--A-PRTFGGGTKLEIK-- 112 usage_00165.pdb 54 RYTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHY-N--S-PQTFGGGTKLEI--- 106 usage_00166.pdb 53 SISGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQSN-S--W-PYTFGGGTKVEI--- 105 usage_00175.pdb 53 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYL-Q--Y-PMTFGQGTKVEI--- 105 usage_00176.pdb 52 LQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAY-K--T-PYTFGQGTKVEI--- 104 usage_00179.pdb 53 SSSGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSN-S--W-PRTFGGGTKLEI--- 105 usage_00193.pdb 52 LYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHY-T--T-PPTFGCGTKVEI--- 104 usage_00214.pdb 53 RYIGVPDRFTGSGAGTDFTFTISSVQAEDLAVYYCQQHY-S--P-PYTFGGGTKLEI--- 105 usage_00218.pdb 53 LADGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQHN-S--A-PYTFGQGTKLEI--- 105 usage_00219.pdb 52 LASGVPSRFKGSGSGTQFTLTISDLEWGDAATYYCHGGY-RN-DDRYAFSGGTELEILS- 108 usage_00227.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHGPF-YW-LFTFGQGTKVEI--- 107 usage_00228.pdb 54 LESGVPSRFSGSGSGTEFTLTISSVQPEDFVTYYCLQHN-S--N-PLTFGGGTKVEI--- 106 usage_00237.pdb 54 VEDGVPSRFSGSGFHTSFNLTISDLQADDIATYYCQVL--------QFFGRGSRLHI--- 102 usage_00242.pdb 54 LETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQFW-S--A-PYTFGGGTKLEI--- 106 usage_00243.pdb 53 VKTGVPSRFRGSGSGTDFTFTISSLQPEDIATYYCQQYD-N--L-PITFGQGTRLEI--- 105 usage_00244.pdb 53 LETGVPSRFSGSGSGTEYTFTISSLQPEDIATYYCQQYD-D--L-PYTFGQGTKVEI--- 105 usage_00266.pdb 53 LYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSY-S--F-PSTFGQGTKVEI--- 105 G P RF GS I D Y C Fg Gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################