################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:57 2021 # Report_file: c_0129_23.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00115.pdb # 2: usage_00116.pdb # 3: usage_00294.pdb # 4: usage_00298.pdb # # Length: 182 # Identity: 71/182 ( 39.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/182 ( 55.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/182 ( 1.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 -NVLITGGDSGIGRAVSIAFAKEGANIAIAYLD-EEGDANETKQYVEKEGVKCVLLPGDL 58 usage_00116.pdb 1 -NVLITGGDSGIGRAVSIAFAKEGANIAIAYLD-EEGDANETKQYVEKEGVKCVLLPGDL 58 usage_00294.pdb 1 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL 60 usage_00298.pdb 1 -KTLVTGGDSGIGRAAAIAFAREGADVAIGYLPVEESDAREVVALIRAAGRQAVALPGDI 59 L TGGDSGIGRA IAfA EGA AI YL EE DA e k e G k VlLPGDl usage_00115.pdb 59 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK 118 usage_00116.pdb 59 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK 118 usage_00294.pdb 61 SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ 120 usage_00298.pdb 60 RDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHFDATVKTNLYGMFWITK 119 sDE c V LG L ILvnn a Q T Eq Tf N f F Tk usage_00115.pdb 119 AALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 178 usage_00116.pdb 119 AALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 178 usage_00294.pdb 121 EAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP 180 usage_00298.pdb 120 AAIPHLPPGASIINTTSVQAVRASANLLDYATTKAGIIAFTRSLAKQLGPRGIRVNAVAP 179 aA hL G IInT Si Ay L DY aTK aI aftRsL l kGIRVN VAP usage_00115.pdb 179 GP 180 usage_00116.pdb 179 G- 179 usage_00294.pdb 181 GP 182 usage_00298.pdb 180 G- 180 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################