################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:20 2021 # Report_file: c_1111_25.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00330.pdb # 2: usage_00332.pdb # 3: usage_00333.pdb # 4: usage_00335.pdb # 5: usage_00336.pdb # 6: usage_00337.pdb # 7: usage_00338.pdb # # Length: 101 # Identity: 4/101 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/101 ( 51.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/101 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00330.pdb 1 -FQESQRCLLHSLKIHNNTAK--TAL-EQYDRYLIVENLYYRGLVSQDI--NIQNVFYKE 54 usage_00332.pdb 1 --EELND------------------Y-PEITKLVEKILFNCLGILFF--HRGQFQESQRC 37 usage_00333.pdb 1 --EELND------------------Y-PEITKLVEKILFNCLGILFF--HRGQFQESQRC 37 usage_00335.pdb 1 AKPVCDVLLKESQNLEKNS-------YPEITKLVEKILFNCLGILFF--HRGQFQESQRC 51 usage_00336.pdb 1 AKPVCDVLLKESQNLEKNS--------PEITKLVEKILFNCLGILFF--HRGQFQESQRC 50 usage_00337.pdb 1 AKPVCDVLLKESQNLEKNS-LND--Y-PEITKLVEKILFNCLGILFF--HRGQFQESQRC 54 usage_00338.pdb 1 ---VCDVLLKESQNLEKNS--ND--Y-PEITKLVEKILFNCLGILFF--HRGQFQESQRC 50 peitklvekilfnclGilff gqfqesqrc usage_00330.pdb 55 LLAHVDTIPP---------ES-NGLLFEYISLIVAKL---- 81 usage_00332.pdb 38 LLHSLK----IHNNT---KTALEQYDRYLIVENLYYRGLVS 71 usage_00333.pdb 38 LLHSLK----IHNN----KTALEQYDRYLIVENLYYRGLV- 69 usage_00335.pdb 52 LLHSLK----IHNN----KTALEQYDRYLIVENLYYRGLV- 83 usage_00336.pdb 51 LLHSLK----IHNNT---KTALEQYDRYLIVENLYYRGLVS 84 usage_00337.pdb 55 LLHSLK----IHNNTASQKTALEQYDRYLIVENLYYRGLVS 91 usage_00338.pdb 51 LLHSLK----IHN-----KTALEQYDRYLIVENLYYRGLV- 81 LLhslk ta eqydrylIvenlyyr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################