################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:19 2021 # Report_file: c_1452_15.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_01889.pdb # 2: usage_01940.pdb # 3: usage_03172.pdb # 4: usage_03174.pdb # 5: usage_03175.pdb # 6: usage_03176.pdb # 7: usage_03727.pdb # 8: usage_03789.pdb # 9: usage_05331.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 44 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 44 ( 81.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01889.pdb 1 KWAT--------------ENAFVLQYH-M------T--PDITPY 21 usage_01940.pdb 1 ----PYIKLGKLKKL--GYGLALGGIWE---------------- 22 usage_03172.pdb 1 ----VVLAIGNP---YNLGQTITQGII-S------A-------- 22 usage_03174.pdb 1 ----VVLAIGNP---YNLGQTITQGII-S------A-------- 22 usage_03175.pdb 1 ----VVLAIGNP---YNLGQTITQGII-S------A-------- 22 usage_03176.pdb 1 ----VVLAIGNP---YNLGQTITQGII-S------A-------- 22 usage_03727.pdb 1 -------------------SWPSDDGQ--PGVQGFAGY------ 17 usage_03789.pdb 1 ----VVLAIGNP---YNLGQTITQGII-S------A-------- 22 usage_05331.pdb 1 ----PVLAIGSP---LGLEGTVTTGIV-S------A-------- 22 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################