################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:12 2021 # Report_file: c_1269_31.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00011.pdb # 2: usage_00212.pdb # 3: usage_00215.pdb # 4: usage_00218.pdb # 5: usage_00221.pdb # 6: usage_00224.pdb # 7: usage_00666.pdb # 8: usage_00813.pdb # 9: usage_00817.pdb # 10: usage_00821.pdb # 11: usage_00825.pdb # 12: usage_01060.pdb # 13: usage_01263.pdb # 14: usage_01267.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 62 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 62 ( 62.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 H--ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 45 usage_00212.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00215.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00218.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00221.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00224.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00666.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00813.pdb 1 ---HALLIQALP--GGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLQA 44 usage_00817.pdb 1 ---HALLIQALP--GGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLQA 44 usage_00821.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_00825.pdb 1 ---ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 44 usage_01060.pdb 1 -GWQLQVVPG--IGHDGQASQVCASLWFDGRPDAAELARLA------------------- 38 usage_01263.pdb 1 H--ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 45 usage_01267.pdb 1 H--ALLIQAL-PG-MGDDALI-----------YALSRYLLCQQPQGHKSCGHCRGCQLMQ 45 l gddAli yAlsrylLc usage_00011.pdb 46 AG 47 usage_00212.pdb 45 AG 46 usage_00215.pdb 45 AG 46 usage_00218.pdb 45 AG 46 usage_00221.pdb 45 AG 46 usage_00224.pdb 45 AG 46 usage_00666.pdb 45 AG 46 usage_00813.pdb 45 G- 45 usage_00817.pdb 45 G- 45 usage_00821.pdb 45 AG 46 usage_00825.pdb 45 AG 46 usage_01060.pdb -- usage_01263.pdb 46 AG 47 usage_01267.pdb 46 AG 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################