################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:54 2021 # Report_file: c_0654_40.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00040.pdb # 2: usage_00270.pdb # 3: usage_00271.pdb # 4: usage_00318.pdb # 5: usage_00323.pdb # 6: usage_00431.pdb # 7: usage_00438.pdb # 8: usage_00564.pdb # 9: usage_00592.pdb # # Length: 68 # Identity: 14/ 68 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 68 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 68 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 HQAALF-I-DDMYFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIR---EDEATQVTI 55 usage_00270.pdb 1 -QAALV-M-ENELFCSGVLVHPQWVLSAAHCF--QNSYTIGLGLHSLE---QE-PGSQMV 51 usage_00271.pdb 1 -QAALV-M-ENELFCSGVLVHPQWVLSAAHCF--QNSYTIGLGLHSLD---QE-PGSQMV 51 usage_00318.pdb 1 -QAALY-T-SGHLLCGGVLIHPLWVLTAAHCK--KPNLQVFLGKHNLRQQE-S-SQEQSS 53 usage_00323.pdb 1 -QAALY-T-SGHLLCGGVLIHPLWVLTAAHCK--KPNLQVFLGKHNLG---QQESSQEQS 52 usage_00431.pdb 1 -QAALY-T-SGHLLCGGVLIHPLWVLTAAHCK--KPNLQVFLGKHNLR---QRESSQEQS 52 usage_00438.pdb 1 -QAALY-T-SGHLLCGGVLIHPLWVLTAAHCK--KPNLQVFLGKHNLR---QRESSQEQS 52 usage_00564.pdb 1 -QAALY-T-SGHLLCGGVLIHPLWVLTAAHCK--KPNLQVFLGKHNLG---QQESSQEQS 52 usage_00592.pdb 1 -LVALYTSRSRTLFCGGTLINQEWVLTAAHCD--RKNFRIKLGMHSKK---VPNEDEQTR 54 qaAL l C G L p WvL AAHC LG H usage_00040.pdb 56 QST----- 58 usage_00270.pdb 52 EASLSVRH 59 usage_00271.pdb 52 EAS----- 54 usage_00318.pdb 54 VV------ 55 usage_00323.pdb 53 S------- 53 usage_00431.pdb 53 S------- 53 usage_00438.pdb 53 S------- 53 usage_00564.pdb 53 S------- 53 usage_00592.pdb 55 V------- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################