################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:41 2021 # Report_file: c_0021_11.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00120.pdb # 2: usage_00192.pdb # 3: usage_00193.pdb # # Length: 311 # Identity: 64/311 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 249/311 ( 80.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/311 ( 19.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 ATVLGAMEMGRRM-DVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLG-LGLGRS 58 usage_00192.pdb 1 ELGFGCMSL---GTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG----- 52 usage_00193.pdb 1 ELGFGCMSL---GTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG----- 52 elgfGcMsl g DeTkarrimdevLelGinylDTAdlYnqGlnEqfvGkal g usage_00120.pdb 59 G--CKVKIATKAA-PMF-GK-----TLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGT 109 usage_00192.pdb 53 -RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD 111 usage_00193.pdb 53 -RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD 111 qdiilATKvg rfe GK dpskAyikeavkdSLrRLQtdyiDLyqLHggtidd usage_00120.pdb 110 PIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQV 169 usage_00192.pdb 112 PIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRS------NIVSIMMQYSILD--- 162 usage_00193.pdb 112 PIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRS------NIVSIMMQYSILD--- 162 PIdETieAfeeLkQEGviryyGiSsirpnvikEylkrs nivsimmqYsild usage_00120.pdb 170 --ETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQ--------YW-KEEHFNGIALVEKA 218 usage_00192.pdb 163 RRPEEWFPLIQEHGVSVVVRGPVARGLLSRRP---LPEGEGYLNYRYDELKLLRESLP-- 217 usage_00193.pdb 163 RRPEEWFPLIQEHGVSVVVRGPVARGLLSRRP---LPEGEGYLNYRYDELKLLRESLP-- 217 peEwFPliqehGvsvvvrgPvArGLLsrRp ny ydElkllreslp usage_00120.pdb 219 LKTTYGPT-APSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPA 277 usage_00192.pdb 218 --------TDRPLHELALQYCLAH-DVV----ATVAAGASSIDQVKANVQAVEATPLTAE 264 usage_00193.pdb 218 --------TDRPLHELALQYCLAH-DVV----ATVAAGASSIDQVKANVQAVEATPLTAE 264 drplhelAlqyclaH dvv atVaaGaSSidQvkaNvqaVEatPLtae usage_00120.pdb 278 VVDAFDQAWNL 288 usage_00192.pdb 265 ERQHIQKLA-- 273 usage_00193.pdb 265 ERQHIQKL--- 272 erqhiqkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################