################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:01 2021 # Report_file: c_0658_25.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00022.pdb # 2: usage_00041.pdb # 3: usage_00249.pdb # 4: usage_00332.pdb # 5: usage_00414.pdb # 6: usage_00494.pdb # 7: usage_00674.pdb # 8: usage_00681.pdb # 9: usage_00789.pdb # 10: usage_01151.pdb # # Length: 87 # Identity: 0/ 87 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 87 ( 1.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/ 87 ( 73.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 --------------GKYTANFKK--VDKNGNV-KVAVT--------AGNYYTFTVMYA-- 33 usage_00041.pdb 1 --------------GKYTANFKK--VEKNGNV-KVDVT--------SGNYYTFTVMYA-- 33 usage_00249.pdb 1 --------------GKYTANFKK--VDKNGNV-KVAVT--------AGNYYTFTVMYA-- 33 usage_00332.pdb 1 IYTANDTTGSNYFRIPVLYTFSNGR----------------------VFSSIDARYGGTH 38 usage_00414.pdb 1 --------------GKYTANFKK--VDKNGNV-KVAVT--------AGNYYTFTVMYA-- 33 usage_00494.pdb 1 --------------LQYTAKYKT--VDKKKAV-LKEAD--------EKNSYTLTVLEA-- 33 usage_00674.pdb 1 ---------------KYTANFKK--VEKNGNV-KVDVT--------SGNYYTFTVMYA-- 32 usage_00681.pdb 1 --------------GKYTANFKK--VDKNGNV-KVAVT--------AGNYYTFTVMYA-- 33 usage_00789.pdb 1 ----------------GKYVMTF--KFGQRVVNLVPW-VLATDYKNYAINYNCDYH-P-- 38 usage_01151.pdb 1 --------------LQYTAKYKT--VDKKKAV-LKEAD--------EKNSYTLTVLEA-- 33 y usage_00022.pdb 34 DDSSALIHTCLHKGNKDL--------- 51 usage_00041.pdb 34 DDSSALIHTCLHKGNKDLGDLYAVLNR 60 usage_00249.pdb 34 DDSSALIHTCLHKGNKDL--------- 51 usage_00332.pdb 39 DF-LNKINI------------------ 46 usage_00414.pdb 34 DDSSALIHVCLHKGNKDL--------- 51 usage_00494.pdb 34 DDSSALVHICLREGSKDLGDLYTVLTH 60 usage_00674.pdb 33 DDSSALIHTCLHKGNKDLGDLYAVLNR 59 usage_00681.pdb 34 DDSSALIHTCLHKGNKDL--------- 51 usage_00789.pdb 39 --DKKAHSIHAWIL---------SK-- 52 usage_01151.pdb 34 DDSSALVHICVREGSKDLGDVYTVLTH 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################