################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:57 2021 # Report_file: c_0328_39.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00175.pdb # 2: usage_00176.pdb # 3: usage_00454.pdb # 4: usage_00456.pdb # 5: usage_00458.pdb # 6: usage_00460.pdb # # Length: 225 # Identity: 69/225 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/225 ( 30.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 69/225 ( 30.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00175.pdb 1 NHALQFDALRMAYDEIKKGENTQLFREVVNKIG---NRLGEK----YGMDLAWCEAVDRR 53 usage_00176.pdb 1 ---------------------TQLFREVVNKIG---NRLGEK----YGMDLAWCEAVDRR 32 usage_00454.pdb 1 ---------------------VDMYEEIHRKLSEAT---RELQNAPPALDTAWVEATRKK 36 usage_00456.pdb 1 ---------------------VDMYEEIHRKLSEAT---RELQNAPPALDTAWVEATRKK 36 usage_00458.pdb 1 ---------------------VDMYEEIHRKLSEAT---RELQNAPPALDTAWVEATRKK 36 usage_00460.pdb 1 ---------------------VDMYEEIHRKLSEAT---RELQNAPPALDTAWVEATRKK 36 E K E D AW EA usage_00175.pdb 54 AEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKH 113 usage_00176.pdb 33 AEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKH 92 usage_00454.pdb 37 ALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKH 96 usage_00456.pdb 37 ALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKH 96 usage_00458.pdb 37 ALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKH 96 usage_00460.pdb 37 ALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKH 96 A K KL L Y N IKESIR G D GD Y CG L A K Y R RDYCT KH usage_00175.pdb 114 IIHMCMNAILVSIEMGQFTHVTSYVNKAEQN-P--------ETLEPMVNAKLRCASGLAH 164 usage_00176.pdb 93 IIHMCMNAILVSIEMGQFTHVTSYVNKAEQN-P--------ETLEPMVNAKLRCASGLAH 143 usage_00454.pdb 97 VINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAE 156 usage_00456.pdb 97 VINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAE 156 usage_00458.pdb 97 VINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAE 156 usage_00460.pdb 97 VINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAE 156 I MC N I VS HV SYV KAE KL CA GLA usage_00175.pdb 165 LELKKYKLAARKFLDV----------------------------- 180 usage_00176.pdb 144 LELKKYKLAARKFLDVNPELGNSYN-EVIAPQDIATYGGLCALAS 187 usage_00454.pdb 157 LAARKYKQAAKCLLLASFDHCD--FPELLSPSNVAIYGGLCALA- 198 usage_00456.pdb 157 LAARKYKQAAKCLLLASFDHCD--FPELLSPSNVAIYGGLCALA- 198 usage_00458.pdb 157 LAARKYKQAAKCLLLASFDHCD--FPELLSPSNVAIYGGLCALA- 198 usage_00460.pdb 157 LAARKYKQAAKCLLLASFDHCD--FPELLSPSNVAIYGGLCALA- 198 L KYK AA L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################