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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:22:44 2021
# Report_file: c_0456_5.html
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#====================================
# Aligned_structures: 6
#   1: usage_00014.pdb
#   2: usage_00016.pdb
#   3: usage_00098.pdb
#   4: usage_00141.pdb
#   5: usage_00143.pdb
#   6: usage_00145.pdb
#
# Length:         96
# Identity:       17/ 96 ( 17.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     76/ 96 ( 79.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/ 96 ( 20.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00014.pdb         1  -PIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI   59
usage_00016.pdb         1  -PIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI   59
usage_00098.pdb         1  GDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV   60
usage_00141.pdb         1  -PIEIWVFVTTSCGYCPSAAV-AWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI   58
usage_00143.pdb         1  -PIEIWVFVTTSCGYCPSAAV-AWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI   58
usage_00145.pdb         1  -PIEIWVFVTTSCGYCPSAAV-AWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI   58
                            piEiwvfvttSCgyCPsaav awdfAlaNdyItskvIDasenQdlaeqfqVvGVPkivi

usage_00014.pdb        60  NKG-VAEFVGAQPENAFLGYIMAVYEKLKREKEQAL   94
usage_00016.pdb        60  NKG-VAEFVGAQPENAFLGYIMAVYEKLKREKE---   91
usage_00098.pdb        61  NGKE--FGQGRMTLTEIVAKV---------------   79
usage_00141.pdb        59  NKG-VAEFVGAQPENAFLGYIAVYEKLKREKE----   89
usage_00143.pdb        59  NKG-VAEFVGAQPENAFLGYIAVYEKLKREKEQ---   90
usage_00145.pdb        59  NKG-VAEFVGAQPENAFLGYIAVYEKLKREK-----   88
                           Nkg   efvGaqpenaflgyi               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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