################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:10 2021 # Report_file: c_0618_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00005.pdb # 2: usage_00040.pdb # 3: usage_00068.pdb # 4: usage_00071.pdb # 5: usage_00072.pdb # 6: usage_00073.pdb # 7: usage_00156.pdb # 8: usage_00265.pdb # # Length: 83 # Identity: 0/ 83 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 83 ( 3.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 83 ( 49.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ---------TYTGYIVLMAI-E---NDEKLNIKKLGERVFLD-SGTLTPLLKKLEKKDYV 46 usage_00040.pdb 1 ---------SYLDFLVLRAT-S---D-GPKTMAYLANRYFVT-QSAITASVDKLEEMGLV 45 usage_00068.pdb 1 ---------TYTGYIVLA-IE----NDEKLNIKKLGERVFLD-SGTLTPLLKKLEKKDYV 45 usage_00071.pdb 1 ---------TYTGYIVLMAI-E---NDEKLNIKKLGERVFLD-SGTLTPLLKKLEKKDYV 46 usage_00072.pdb 1 ---------TYTGYIVLMAI-E---NDEKLNIKKLGERVFLD-SGTLTPLLKKLEKKDYV 46 usage_00073.pdb 1 ---------SFEEFAVLTYI-SENKE-KEYYLKDIINHLNYK-QPQVVKAVKILSQEDYF 48 usage_00156.pdb 1 ----------YPQYLALLLL-W--EH-ETLTVKKMGEQLYLD-SGTLTPMLKRMEQQGLI 45 usage_00265.pdb 1 TFFIDILLDTIRDEIAGCIE-K--AY-EKILFTEATRILFFNTPKKMTDYAKKRG----W 52 l t k usage_00005.pdb 47 VRTR-----EEKD-ERNLQISL- 62 usage_00040.pdb 46 VRVR-----DRED-RRKILIEI- 61 usage_00068.pdb 46 VRTLQISL--------------- 53 usage_00071.pdb 47 VRTRLQISL-------------- 55 usage_00072.pdb 47 VRTLQISL--------------- 54 usage_00073.pdb 49 DKKR-----NEH-DERTVLILVN 65 usage_00156.pdb 46 TRKR-----SEED-ERSVLISL- 61 usage_00265.pdb 53 VLGP-----N------NYYSF-- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################