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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:29:36 2021
# Report_file: c_0778_53.html
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#====================================
# Aligned_structures: 6
#   1: usage_00296.pdb
#   2: usage_00297.pdb
#   3: usage_00346.pdb
#   4: usage_00347.pdb
#   5: usage_00361.pdb
#   6: usage_00362.pdb
#
# Length:         82
# Identity:       61/ 82 ( 74.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     61/ 82 ( 74.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/ 82 ( 24.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00296.pdb         1  KEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPF-------ATLRAFAAGVTPA   53
usage_00297.pdb         1  KEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFS------ATLRAFAAGVTPA   54
usage_00346.pdb         1  ----FVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSD--QN-ATLRAFAAGVTPA   53
usage_00347.pdb         1  KEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLIQNATLRAFAAGVTPA   60
usage_00361.pdb         1  ----FVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPF----------------VTPA   40
usage_00362.pdb         1  ----FVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPF----------------VTPA   40
                               FVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPF                VTPA

usage_00296.pdb        54  QCFEMLALIRQKHPTIPIGLLM   75
usage_00297.pdb        55  QCFEMLALIRQKHPTIPIGLLM   76
usage_00346.pdb        54  QCFEMLALIRQKHPTIPIGLLM   75
usage_00347.pdb        61  QCFEMLALIRQKHPTIPIGLLM   82
usage_00361.pdb        41  QCFEMLALIREKHPTIPIGLLM   62
usage_00362.pdb        41  QCFEMLALIREKHPTIPIGLLM   62
                           QCFEMLALIR KHPTIPIGLLM


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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