################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:35 2021 # Report_file: c_1180_94.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00079.pdb # 2: usage_00173.pdb # 3: usage_00204.pdb # 4: usage_00207.pdb # 5: usage_00258.pdb # 6: usage_00266.pdb # 7: usage_00345.pdb # 8: usage_00564.pdb # 9: usage_00586.pdb # 10: usage_00599.pdb # 11: usage_00747.pdb # 12: usage_00789.pdb # 13: usage_00790.pdb # 14: usage_00950.pdb # 15: usage_01042.pdb # 16: usage_01043.pdb # 17: usage_01218.pdb # 18: usage_01387.pdb # 19: usage_01388.pdb # 20: usage_01389.pdb # 21: usage_01434.pdb # 22: usage_01467.pdb # 23: usage_01632.pdb # 24: usage_01642.pdb # 25: usage_01648.pdb # 26: usage_01654.pdb # 27: usage_01714.pdb # 28: usage_01841.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 41 ( 14.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 41 ( 51.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00173.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00204.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00207.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00258.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00266.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00345.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00564.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00586.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00599.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00747.pdb 1 EYTFDQQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_00789.pdb 1 EYTFDYQ------T-PTKVKVHKK-AL-SGDS-YWVFVKR- 30 usage_00790.pdb 1 EYTFDYQ------T-PTKVKVHKK-AL-SGDS-YWVFVKR- 30 usage_00950.pdb 1 EYTFDYQM-----TPTKVKVHMKK-ALD-SYW-VFVKR--- 30 usage_01042.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01043.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01218.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01387.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01388.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01389.pdb 1 -YTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 31 usage_01434.pdb 1 --------NVKLPFFVRSVATFIMQGS-KLSGSECYILLTL 32 usage_01467.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01632.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01642.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01648.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-DSYW-VFVKR--- 30 usage_01654.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01714.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFVKR- 32 usage_01841.pdb 1 EYTFDYQM-----TPTKVKVHMKK-AL-SGDS-YWVFV--- 30 t kk al v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################