################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:57 2021 # Report_file: c_0471_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00076.pdb # 3: usage_00131.pdb # 4: usage_00132.pdb # 5: usage_00133.pdb # 6: usage_00134.pdb # 7: usage_00135.pdb # 8: usage_00136.pdb # 9: usage_00140.pdb # 10: usage_00141.pdb # 11: usage_00146.pdb # 12: usage_00149.pdb # 13: usage_00176.pdb # # Length: 146 # Identity: 8/146 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/146 ( 18.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/146 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ----RLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSH-SLFSK-WFGK-L 53 usage_00076.pdb 1 -----GVLLAGPPGCGKTLLAKAVANESG---------LNFISVK--GPELLN-MYVG-E 42 usage_00131.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00132.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00133.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00134.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00135.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00136.pdb 1 VKPPRGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS-KLAG-E 47 usage_00140.pdb 1 -----GVILYGPPGTGKTLIARAVANESG---------ANFLSIN--GPEIMS-KYYG-Q 42 usage_00141.pdb 1 ITPPKGVILYGPPGTGKTLIARAVANESG---------ANFLSIN--GPEIMS-KYYG-Q 47 usage_00146.pdb 1 ----RGILLYGPPGCGKTMIAAAVANELD---------SEFIHVD--AASIMS-KWLG-E 43 usage_00149.pdb 1 ----RGILLYGPPGTGKTLIARAVANETG---------AFFFLIN--GPEIMS---AG-E 41 usage_00176.pdb 1 ----GVLLYGPPGCGKT-FVVRALASSGR---------LSVHAVK--GSELMDKWV--GS 42 l gPpg gk a A usage_00005.pdb 54 VQKMFDQIDELAEDEKC-----MVFVLIDEVE-----------------------IRAVN 85 usage_00076.pdb 43 SERAVRQVFQRAKNS-A-----PCVIFFDEVDALCPS------------------VRVVN 78 usage_00131.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00132.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00133.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00134.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00135.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00136.pdb 48 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKT----HG-EVERRIVS 92 usage_00140.pdb 43 SEQKLREIFSKAEET-A-----PSIIFIDEIDSIAP----KREEV----QG-EVERRVVA 87 usage_00141.pdb 48 SEQKLREIFSKAEET-A-----PSIIFIDEIDSIAP----KREEV----QG-EVERRVVA 92 usage_00146.pdb 44 AEKNVAKIFKTAREL-SKKENKPAIIFIDELDALLA-SYT-------------GEARVRN 88 usage_00149.pdb 42 SESNLRKAFEEAEKN-A-----PAIIFIDELDAIAP----KREKTHGEVE-----RRIVS 86 usage_00176.pdb 43 SEKAVRELFARARDS-A-----PSLVFLDEIDALAP----RRGQN----FDSGVTDKVVA 88 e f A p f DE d r v usage_00005.pdb 86 ALLTQIDRI-R--RRDNVLILCTSN- 107 usage_00076.pdb 79 QLLTEMDGL-E--ARQQVFIMAATN- 100 usage_00131.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00132.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00133.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00134.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00135.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00136.pdb 93 QLLTLMDGL-K--QRAHVIVMAATNR 115 usage_00140.pdb 88 QLLTLMDGM-K--ERGHVIVIGAT-- 108 usage_00141.pdb 93 QLLTLMDGM-K--ERGHVIVIGATN- 114 usage_00146.pdb 89 QFLKEMDGLADKNEISKVYVIGAT-- 112 usage_00149.pdb 87 QLLTLMDGL-K--QRAHVIVMAAT-- 107 usage_00176.pdb 89 SLLTELDGI-E--PLRDVVVLGATN- 110 lLt Dg V at #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################