################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:41 2021 # Report_file: c_0699_100.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00222.pdb # 2: usage_00250.pdb # 3: usage_00410.pdb # 4: usage_00579.pdb # 5: usage_00640.pdb # 6: usage_00924.pdb # 7: usage_01037.pdb # 8: usage_01391.pdb # # Length: 65 # Identity: 32/ 65 ( 49.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 65 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 65 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00222.pdb 1 -VNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 59 usage_00250.pdb 1 -VNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 59 usage_00410.pdb 1 -VNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLR 59 usage_00579.pdb 1 VINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVL 60 usage_00640.pdb 1 VLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLL 60 usage_00924.pdb 1 -LNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLL 59 usage_01037.pdb 1 --NVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLL 58 usage_01391.pdb 1 --NVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLR 58 NvTWL Ng VT GV E FLpr D F KfhYL F PS D YDC V HWGL Pl usage_00222.pdb 60 KHWEF 64 usage_00250.pdb 60 KH--- 61 usage_00410.pdb 60 KHWEF 64 usage_00579.pdb 61 KHW-- 63 usage_00640.pdb 61 KHWEA 65 usage_00924.pdb 60 KHWE- 63 usage_01037.pdb 59 KHWEA 63 usage_01391.pdb 59 KHWEF 63 KH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################