################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:01 2021 # Report_file: c_0965_46.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00156.pdb # 2: usage_00182.pdb # 3: usage_00183.pdb # 4: usage_00282.pdb # 5: usage_00486.pdb # 6: usage_00487.pdb # 7: usage_00507.pdb # 8: usage_00513.pdb # 9: usage_00514.pdb # 10: usage_00515.pdb # 11: usage_00516.pdb # 12: usage_00517.pdb # 13: usage_00519.pdb # 14: usage_00605.pdb # # Length: 45 # Identity: 7/ 45 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 45 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 45 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00156.pdb 1 --PPAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTY-- 41 usage_00182.pdb 1 --SPAFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSL 43 usage_00183.pdb 1 --SPAFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSL 43 usage_00282.pdb 1 --SPRFEKSVYEADLAENSAPGTPILQLRAADLD-VGVNGQIEYV 42 usage_00486.pdb 1 --NPVFDEPVYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYSF 43 usage_00487.pdb 1 --NPVFDEPVYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYS- 42 usage_00507.pdb 1 --PPVFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAEIIYAF 43 usage_00513.pdb 1 --PPAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSF 43 usage_00514.pdb 1 --PPAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSF 43 usage_00515.pdb 1 --PPAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSF 43 usage_00516.pdb 1 --PPAFSQTSYSVYLPENNPRGTSIFSVSAHDPDDEENAKVTYSL 43 usage_00517.pdb 1 DNRPVFSQDVYRVRLPEDLPPGTTVLRLKAMDQDEGINAEFTYSF 45 usage_00519.pdb 1 --APVFHQASYLVHVAENNPPGTSIAQVSASDPDLGSNGLISYSI 43 usage_00605.pdb 1 DNRPVFSQDVYRVRLPEDLPPGTTVLRLKAMDQDEGINAEFTYSF 45 P F Y v E p t A D D n y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################