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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:10:19 2021
# Report_file: c_0020_4.html
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#====================================
# Aligned_structures: 5
#   1: usage_00012.pdb
#   2: usage_00013.pdb
#   3: usage_00014.pdb
#   4: usage_00033.pdb
#   5: usage_00087.pdb
#
# Length:        224
# Identity:       44/224 ( 19.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    117/224 ( 52.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/224 ( 18.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00012.pdb         1  -LILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA   56
usage_00013.pdb         1  TLILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA   57
usage_00014.pdb         1  --ILEKQGPTLVITINRPDVRNA-SL-QVAELSTIFSEIENDISIRAAVLRGAGG-HFCA   55
usage_00033.pdb         1  --LLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGADG-HFCA   57
usage_00087.pdb         1  EVLLGKKGCTGVITLNRPKFLNALTL-NIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCA   59
                              Lek g tlvIT NRP  rNA sL  v el       e D s ra vlrGAgG hFCA

usage_00012.pdb        57  GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG  111
usage_00013.pdb        58  GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG  112
usage_00014.pdb        56  GGDIKD-AGARSQKAGEGRD-DP-FYKLNRAFGQ-IQQVNESSKVVIAITEGAV-GGGFG  110
usage_00033.pdb        58  GGDIKDMAGARAAGA-------EAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFG  110
usage_00087.pdb        60  GGDIRVISEAEKAK------QKI-APVFFREEYL-NNAVGSCQKPYVALIHGIT-GGGVG  110
                           GGDIkd agAr  k             lnRafg     v    k   A  eGav GGGfG

usage_00012.pdb       112  LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC  169
usage_00013.pdb       113  LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC  170
usage_00014.pdb       111  LACVSDLAIAGPTAKFG-PETTLGVIPAQIAPFVVERIGL-TQARRLALLGLRIDATEAC  168
usage_00033.pdb       111  LACVSDVAIAAADAQFGLPETSLGILPAQIAPFVVRRIGL-TQARRLALTAARFDGREAL  169
usage_00087.pdb       111  LSVHGQFRVATEKCLFA-PETAIGLFPDVGGGYFLPRL-QGKLGYFLALTGFRLKGRDVY  168
                           Lacvsd aiA   a Fg PET lG  Paqiapfvv Ri l tqarrLAL g R d  ea 

usage_00012.pdb       170  KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV  212
usage_00013.pdb       171  KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV  213
usage_00014.pdb       169  KLGIVHQVAESEEQLSD-LNQALERVRLCAPDATAETKALLHRV  211
usage_00033.pdb       170  RLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLAS  213
usage_00087.pdb       169  RAGIATHFVD-SEKLAL-EEDLLAL-------------------  191
                            lGivh      e L   l   Le                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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