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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:11:52 2021
# Report_file: c_0444_3.html
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#====================================
# Aligned_structures: 5
#   1: usage_00001.pdb
#   2: usage_00003.pdb
#   3: usage_00008.pdb
#   4: usage_00011.pdb
#   5: usage_00013.pdb
#
# Length:         89
# Identity:        3/ 89 (  3.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/ 89 ( 18.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/ 89 ( 25.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  ---GNTLYVYGE------DMTPTLLRGAFSP-FGNIIDLSM-DP----PRNCAFVTYEKM   45
usage_00003.pdb         1  -----SLVVANGGLG-N-GVSRNQLLPVLEK-CGLVDALLM-PP----NKPYSFARYRTT   47
usage_00008.pdb         1  ----ADVYVGNL---PR-DARVSDLKRALRELGSVPLRLTW-QG----PRRRAFLHYPDS   47
usage_00011.pdb         1  PRKGNTLYVYGE------DMTPTLLRGAFSP-FGNIIDLSM-DP----PRNCAFVTYEKM   48
usage_00013.pdb         1  ----CTLWMTNF---P-PSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSK   52
                                 l v               l             l          r  af  y   

usage_00001.pdb        46  ESADQAVAELNGTQVE-----SVQLKVNI   69
usage_00003.pdb        48  EESKRAYVTLNGKEVVDDLGQKITLYLNF   76
usage_00008.pdb        48  AAAQQAVSCLQGLRLG-----TDTLRVAL   71
usage_00011.pdb        49  ESADQAVAELNGTQVE-----SVQLKVN-   71
usage_00013.pdb        53  EDARYCVEKLNGLKIE-----GYTLVTKV   76
                           e a  av  LnG            L    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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