################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:50 2021 # Report_file: c_1142_249.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00103.pdb # 2: usage_00143.pdb # 3: usage_01404.pdb # 4: usage_01405.pdb # 5: usage_02059.pdb # 6: usage_02074.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 66 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 66 ( 86.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 HALTVSYFYDATRNVYRIISIGG-------------AKAIINSTV-----TP-------- 34 usage_00143.pdb 1 --------------KEYEMEVVRDKN--------DNCIIVCSIEN-----FDAMGIHTGD 33 usage_01404.pdb 1 ---------------EIEYEVVRDAD--------DNCVTVCNMEN-----VDA---T-GD 28 usage_01405.pdb 1 ---------------EIEYEVVRDAD--------DNCVTVCNMEN-----VDT---G-D- 27 usage_02059.pdb 1 ----G----------MKLEAV-----NRMNPSLVCVASVTDVVD-SRFLVHF-------- 32 usage_02074.pdb 1 -LWELTVPVEAGT-ELEIVCKAVDSS--------YNVQP--------------------- 29 usage_00103.pdb ------ usage_00143.pdb 34 SITVAP 39 usage_01404.pdb 29 SVVVAP 34 usage_01405.pdb 28 SVVVAP 33 usage_02059.pdb ------ usage_02074.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################