################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:19 2021 # Report_file: c_0216_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00034.pdb # 2: usage_00051.pdb # 3: usage_00055.pdb # 4: usage_00059.pdb # 5: usage_00072.pdb # # Length: 158 # Identity: 125/158 ( 79.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 130/158 ( 82.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/158 ( 8.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 TKVLQAPGYNG--TGKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ 58 usage_00051.pdb 1 TKVLQAPGYNG--TGKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ 58 usage_00055.pdb 1 TKVLQAPGFTKETYGKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ 60 usage_00059.pdb 1 TKVLQAPGFTKETYGKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ 60 usage_00072.pdb 1 TKVLQAPGYNG--TGKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ 58 TKVLQAPG GKDWALIKLAQPINQPTLKIATTTAYNQGTFTVAGWGANREGGSQQ usage_00034.pdb 59 RYLLKANVPFVSDAACRSAYGNELVANEEICAGYPDTGGVDPCQGDSGGPMFRKDNADEW 118 usage_00051.pdb 59 RYLLKANVPFVSDAACRSAYGNELVANEEICAGYD-TGGVDTCQGDSGGPMFRKDNADEW 117 usage_00055.pdb 61 RYLLKANVPFVSDAACRSSSSFILVANEMICAGYPDTGGVDTCQGDSGGPMFRKDNADEW 120 usage_00059.pdb 61 RYLLKANVPFVSDAACRSSSSFILVANEMICAGYD-TKQEDTCQGDSGGPMFRKDNADEW 119 usage_00072.pdb 59 RYLLKANVPFVSDAACRSAYGNELVANEEICAGYPDTGGVDTCQGDSGGPMFRKDNADEW 118 RYLLKANVPFVSDAACRS LVANE ICAGY TggvDtCQGDSGGPMFRKDNADEW usage_00034.pdb 119 IQVGIVSWGYGCARPGYPGVYTEVSTFA---------- 146 usage_00051.pdb 118 IQVGIVSWGEGCARKGKYGVYTEVSTFA---------- 145 usage_00055.pdb 121 IQVGIVSWGYGCARPGYPGVYTEVSTFASAIASAARTL 158 usage_00059.pdb 120 VQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAARTL 157 usage_00072.pdb 119 IQVGIVSWGYGCARPGYPGVYTEVSTFA---------- 146 iQVGIVSWG GCAR G GVYTEVSTFA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################