################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:06 2021 # Report_file: c_0710_7.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00034.pdb # 5: usage_00039.pdb # 6: usage_00083.pdb # 7: usage_00084.pdb # 8: usage_00087.pdb # 9: usage_00221.pdb # 10: usage_00305.pdb # 11: usage_00306.pdb # 12: usage_00374.pdb # # Length: 78 # Identity: 4/ 78 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 78 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 78 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 usage_00018.pdb 1 ----IRDSLLQDGEFS----MDLRTKP-----TFNVTVTKTDKTLVLLMGKEGV----HG 43 usage_00019.pdb 1 ----IRDSLLQ--EFS----MDLRTKS---APTFNVTVTKTDKTLVLLMGKGGV----HG 43 usage_00034.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 usage_00039.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 usage_00083.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 usage_00084.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 usage_00087.pdb 1 KCSVIRDSLYVDGDCT----MDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGV----HG 52 usage_00221.pdb 1 ----YTN-SLD-----ENTYAELLTGY---APVSPIVIARTHTALIFL-GKPTTSRRDVY 46 usage_00305.pdb 1 ----IRDSLLQDGEFS----MDLRTKS-----TFNVTVTKTDKTLVLLTGKEGV----HG 43 usage_00306.pdb 1 ----IRDSLLQDGEFS----MDLRT-------TFNVTVTKTDKTLVLLTGKEGV----HG 41 usage_00374.pdb 1 ----IRDSLLQDGEFS----MDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGV----HG 48 ird ll mdlrT t nv v t Lv l GK gv hg usage_00017.pdb 49 GLINKKCYEMASHLRRSQ 66 usage_00018.pdb 44 GLINKKCYEMASHLRRSQ 61 usage_00019.pdb 44 GLINKKCYEMASHLRRSQ 61 usage_00034.pdb 49 GLINKKCYEMASHLRRSQ 66 usage_00039.pdb 49 GLINKKCYEMASHLRRSQ 66 usage_00083.pdb 49 GLINKKCYEMASHLRRSQ 66 usage_00084.pdb 49 GLINKKCYEMASHLRRSQ 66 usage_00087.pdb 53 GGLNKKAYSMAKYLRDSG 70 usage_00221.pdb 47 RTCRDHATRVRATG---- 60 usage_00305.pdb 44 GLINKKCYEMASHLRRSQ 61 usage_00306.pdb 42 GLINKKCYEMASHLRRSQ 59 usage_00374.pdb 49 GLINKKCYEMASHLRRSQ 66 g nkk y ma l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################