################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:56 2021 # Report_file: c_0553_40.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00100.pdb # 2: usage_00122.pdb # 3: usage_00468.pdb # 4: usage_00470.pdb # 5: usage_01141.pdb # 6: usage_02032.pdb # 7: usage_02079.pdb # 8: usage_02080.pdb # 9: usage_02081.pdb # 10: usage_02082.pdb # # Length: 65 # Identity: 35/ 65 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 65 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 65 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 --NVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 58 usage_00122.pdb 1 -VNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 59 usage_00468.pdb 1 --NVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLR 58 usage_00470.pdb 1 --NVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLR 58 usage_01141.pdb 1 -VNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 59 usage_02032.pdb 1 --NVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLL 58 usage_02079.pdb 1 VINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVL 60 usage_02080.pdb 1 VINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVL 60 usage_02081.pdb 1 VINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVL 60 usage_02082.pdb 1 VINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVL 60 N TWLRN V GV ET F D F K YL F PS D YDC V HWGL EP usage_00100.pdb 59 KHWEF 63 usage_00122.pdb 60 KHWEF 64 usage_00468.pdb 59 KHWE- 62 usage_00470.pdb 59 KHWE- 62 usage_01141.pdb 60 KHWE- 63 usage_02032.pdb 59 KHWEF 63 usage_02079.pdb 61 KHWEP 65 usage_02080.pdb 61 KHWEP 65 usage_02081.pdb 61 KHWEP 65 usage_02082.pdb 61 KHWEP 65 KHWE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################