################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:43:07 2021 # Report_file: c_1434_102.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00779.pdb # 2: usage_00867.pdb # 3: usage_00868.pdb # 4: usage_01614.pdb # 5: usage_01615.pdb # 6: usage_01630.pdb # 7: usage_01631.pdb # 8: usage_01651.pdb # 9: usage_02170.pdb # 10: usage_02222.pdb # 11: usage_02234.pdb # 12: usage_02739.pdb # 13: usage_02797.pdb # 14: usage_02798.pdb # 15: usage_03324.pdb # 16: usage_03545.pdb # # Length: 88 # Identity: 16/ 88 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 88 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 88 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00779.pdb 1 -DTTKEHLESYSYHLGMMFQIKDDLLDC---------STYVSLLGKDGAEDKLTYHRDAA 50 usage_00867.pdb 1 NKDIRDRLKAYARDIGLAFQIADDLIDA-------GKATFLSLLGLEKARSQAQALVDQA 53 usage_00868.pdb 1 -KDIRDRLKAYARDIGLAFQIADDLIDAEGD----GKATFLSLLGLEKARSQAQALVDQA 55 usage_01614.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_01615.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_01630.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDVE--------PTYPALLGLEAAKGYALELRDLA 51 usage_01631.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_01651.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_02170.pdb 1 -KGELKALQTYAQAIGLAFQVQDDILD----------PTYPALLGLAAAKEYALELRDQA 49 usage_02222.pdb 1 -KGELKALQTYAQAIGLAFQVQDDILDVESDTATL--PTYPALLGLAAAKEYALELRDQA 57 usage_02234.pdb 1 -----GPLTAYATALGLAFQIADDILDVE--------ATFVSLLGLAGAKSRAADLVAEA 47 usage_02739.pdb 1 -KGELKALQTYAQAIGLAFQVQDDILDVESDTAT---PTYPALLGLAAAKEYALELRDQA 56 usage_02797.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_02798.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_03324.pdb 1 -PASLAALERYAEAIGLAFQVQDDILDV---------PTYPALLGLEAAKGYALELRDLA 50 usage_03545.pdb 1 -----PHLDRYAEAVGLAFQVQDDILDIISD-----KSTYPALLGLEGAQQKAHTLLQEA 50 L Ya GlaFQ DD D T LLGl A a l A usage_00779.pdb 51 VDELTQIDEQFN-TKHLLEIVDLFYSR- 76 usage_00867.pdb 54 IAHLSVF-G--SEADYLRSIARYIVA-- 76 usage_00868.pdb 56 IAHLSVF-G--SEADYLRSIAR------ 74 usage_01614.pdb 51 LAALDGF-P--PSADPLRQLARYIVER- 74 usage_01615.pdb 51 LAALDGF-P--PSADPLRQLARYIVE-- 73 usage_01630.pdb 52 LAALDGF-P--PSADPLRQLARYIVER- 75 usage_01631.pdb 51 LAALDGF-P--PSADPLRQLARYIVER- 74 usage_01651.pdb 51 LAALDGF-P--PSADPLRQLARYIVER- 74 usage_02170.pdb 50 LHALRPF-D--AAAEPLRELARYIVE-- 72 usage_02222.pdb 58 LHALRPF-D--AAAEPLRELARYIVE-- 80 usage_02234.pdb 48 EAALAPY-G--EAASTLRACARYVIERD 72 usage_02739.pdb 57 LHALRPF-D--AAAEPLRELARYIVER- 80 usage_02797.pdb 51 LAALDGF-P--PSADPLRQLARYIVER- 74 usage_02798.pdb 51 LAALDGF-P--PSADPLRQLAR------ 69 usage_03324.pdb 51 LAALDGF-P--PSADPLRQLAR------ 69 usage_03545.pdb 51 LLALEAI-P--YNTEHLEEFARYVV--- 72 L L ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################