################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:36 2021 # Report_file: c_1139_24.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00081.pdb # 6: usage_00212.pdb # 7: usage_00213.pdb # 8: usage_00214.pdb # 9: usage_00216.pdb # 10: usage_00283.pdb # 11: usage_00284.pdb # # Length: 79 # Identity: 54/ 79 ( 68.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 79 ( 68.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 79 ( 19.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 ---------------IISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECY 45 usage_00032.pdb 1 ---------------IISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECY 45 usage_00078.pdb 1 -EDLAYKNTVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 59 usage_00079.pdb 1 SEDLAYKNTVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 60 usage_00081.pdb 1 ---------------VISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 45 usage_00212.pdb 1 ---------------VISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 45 usage_00213.pdb 1 ---------------VISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 45 usage_00214.pdb 1 SEDLAYKNTVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 60 usage_00216.pdb 1 SEDLAYKNTVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECY 60 usage_00283.pdb 1 ---------------IISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECY 45 usage_00284.pdb 1 ---------------IISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECY 45 ISKTIS KGML YNSL EEGKK F AYSAS YP MDILYECY usage_00031.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00032.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00078.pdb 60 EDVASGSEIRSVVLAGRRF 78 usage_00079.pdb 61 EDVASGSEIRSVVLAGRRF 79 usage_00081.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00212.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00213.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00214.pdb 61 EDVASGSEIRSVVLAGRRF 79 usage_00216.pdb 61 EDVASGSEIRSVVLAGRRF 79 usage_00283.pdb 46 EDVASGSEIRSVVLAGRRF 64 usage_00284.pdb 46 EDVASGSEIRSVVLAGRRF 64 EDVASGSEIRSVVLAGRRF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################