################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:34 2021 # Report_file: c_1471_12.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00316.pdb # 2: usage_00559.pdb # 3: usage_00676.pdb # 4: usage_00883.pdb # 5: usage_01510.pdb # 6: usage_01520.pdb # 7: usage_01549.pdb # 8: usage_01550.pdb # # Length: 59 # Identity: 34/ 59 ( 57.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 59 ( 69.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 59 ( 30.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 ----AHGLAWSYYIGYLRLILPGLQARIRMFNQLHNNMLSGAG-------SRRLYILFP 48 usage_00559.pdb 1 NFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------NLLRGAVSQRLYILLP 52 usage_00676.pdb 1 --SVAHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------NLLRGAVSQRLYILLP 50 usage_00883.pdb 1 NFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYN----------RGAVSQRLYILLP 49 usage_01510.pdb 1 ----AHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------NLLRGAVSQRLYILLP 48 usage_01520.pdb 1 ----AHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------NLLRGAVSQRLYILLP 48 usage_01549.pdb 1 ----AHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------N-LRGAVSQRLYILLP 47 usage_01550.pdb 1 ----AHGLAWSYYIGYLRLILPELQARIRTYNQHYN-------N-LRGAVSQRLYILLP 47 AHGLAWSYYIGYLRLILPeLQARIRtyNQhyN SqRLYILlP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################