################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:20 2021 # Report_file: c_1169_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00619.pdb # 2: usage_00620.pdb # 3: usage_00898.pdb # 4: usage_00958.pdb # 5: usage_01066.pdb # # Length: 41 # Identity: 1/ 41 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 41 ( 29.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 41 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00619.pdb 1 --RVVNG----LLPSN-SSASLSIPQFVV-SHGGEYFFSPP 33 usage_00620.pdb 1 QPRVVNG----LLPSN-SSASLSIPQFVV-SHGGEYFFSPP 35 usage_00898.pdb 1 QPRVVNG----LLPSN-SSASLSIPQFVV-SHGGEYFFSPP 35 usage_00958.pdb 1 --RTVGG----LDPLN-QNETFTVPLFVI-PKGGEYFFLPS 33 usage_01066.pdb 1 KPAEVEITLRNNKREVSANLKHVVKPD-DILIHKKG----- 35 r V g l p n p f ggey #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################