################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:44 2021 # Report_file: c_0778_86.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00140.pdb # 2: usage_00181.pdb # 3: usage_00359.pdb # # Length: 93 # Identity: 27/ 93 ( 29.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 93 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 93 ( 5.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00140.pdb 1 -VLCLNRYYGWYVAGGDLEEAKRMLEDELKGWEERCPKTPIMFTEYGADTVAGLHDTVPV 59 usage_00181.pdb 1 -VICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQ-KPIIQSEYGAETIAGFHQDPPL 58 usage_00359.pdb 1 DVLCLNRYFGWYTQTAELDEAEAALEEELRGWTEKYD-KPIVMTDYGADTVAGLHSVMVT 59 VlCLNrYygWY g Leea Le el gW eky kPI teYGAdTvAGlH p usage_00140.pdb 60 MFTEEYQVEYYKANHEVMDKCKNFV--GEQVWN 90 usage_00181.pdb 59 MFTEEYQKSLLEQYHLGLDQKRRKYVVGELIW- 90 usage_00359.pdb 60 PWSEEFQVEMLDMYHRVFDRFEAMA--GEQVWN 90 mftEEyQve l yH v D GEqvW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################