################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:32 2021 # Report_file: c_0121_6.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00005.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00028.pdb # 5: usage_00035.pdb # 6: usage_00068.pdb # 7: usage_00101.pdb # 8: usage_00114.pdb # 9: usage_00115.pdb # 10: usage_00122.pdb # 11: usage_00156.pdb # 12: usage_00214.pdb # 13: usage_00246.pdb # 14: usage_00255.pdb # 15: usage_00256.pdb # 16: usage_00383.pdb # 17: usage_00438.pdb # 18: usage_00439.pdb # 19: usage_00440.pdb # 20: usage_00441.pdb # 21: usage_00469.pdb # 22: usage_00475.pdb # 23: usage_00514.pdb # 24: usage_00541.pdb # # Length: 129 # Identity: 13/129 ( 10.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/129 ( 15.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/129 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 QAVVTQESALTTSPGETVTLTCRSSTGAVT--T---S-N-YANWVQEKPDHLFTGLIGG- 52 usage_00024.pdb 1 -LVLTQSSSASFSLGASAKLTCTLSS--QH--S---T-Y-TIEWYQQQPLKPPKYVMELK 50 usage_00025.pdb 1 -LVLTQSSSASFSLGASAKLTCTLSS--QH--S---T-Y-TIEWYQQQPLKPPKYVMELK 50 usage_00028.pdb 1 -SVLTQPPSVSVAPGQTARITCGGND---I--G---R-K-SVHWNQQKPGQAPVLVVCY- 48 usage_00035.pdb 1 QSVLTQPPSVSVAPGQTARITCGGNN---I--G---S-K-SVHWYQQKPGQAPVLVVYD- 49 usage_00068.pdb 1 NFMLNQPHSVSESPGKTVTISCTRSSG-NI--A---S-N-YVQWYQQ---SAPITVIYE- 48 usage_00101.pdb 1 -LMTQSPSSLSVSVGSSVTITCQASQN--I--T-----N-YIVWYQQKPGQAPKLLIYY- 48 usage_00114.pdb 1 QAVVTQEPSVTVSPGGTVILTCGSSTGAVT--S---G-H-YANWFQQKPGQAPRALIFE- 52 usage_00115.pdb 1 QAVVTQEPSVTVSPGGTVILTCGSSTGAVT--S---G-H-YANWFQQKPGQAPRALIFE- 52 usage_00122.pdb 1 -YVLTQPPSVSVAPGQTASITCSGDK---L--G---D-K-YVSWYQQRPGQSPVLVLYQ- 48 usage_00156.pdb 1 IQLTQSPLSLPVSLGDQASISCRSSQS--L--VHSNGNT-YLHWYLQKPGQSPKLLIYK- 54 usage_00214.pdb 1 ---LTQPPSVSGAPGQRVTISCTGSS--SNIGA---G-Y-DVHWYQQLPGTAPKLLIYD- 49 usage_00246.pdb 1 -QMTQSPSSLSASVGDRVTITCQASQD--I--S-----N-YLNWYQQKPGKAPKLLIYD- 48 usage_00255.pdb 1 -YVLTQPPSVSVAPGQTARITCGGNN---I--G---S-K-SVHWYQQKPGQAPVLVVYD- 48 usage_00256.pdb 1 -YVLTQPPSVSVAPGQTARITCGGNN---I--G---S-K-SVHWYQQKPGQAPVLVVYD- 48 usage_00383.pdb 1 NFMLTQPHSVSESPGKTVTISCTRSSG-SI--A---S-N-YVQWYQQRPGSSPTTVIYE- 51 usage_00438.pdb 1 -YVLTQPPSVSVAPGKTARITCGGNN---I--A---N-K-NVHWYQQKPGQAPVLVIYY- 48 usage_00439.pdb 1 -YVLTQPPSVSVAPGKTARITCGGNN---I--A---N-K-NVHWYQQKPGQAPVLVIYY- 48 usage_00440.pdb 1 -YVLTQPPSVSVAPGKTARITCGGNN---I--A---N-K-NVHWYQQKPGQAPVLVIYY- 48 usage_00441.pdb 1 -YDLTQARSVSVSPGQTARVTCGGDN---I--G---S-K-SVQWYQQKPPQAPVLVMSA- 48 usage_00469.pdb 1 ---LTQDPAVSVALGQTVRITCQGDS---L--R---S-Y-YASWYQQKPGQAPVLVIYG- 46 usage_00475.pdb 1 -YELIQPSSASVTVGETVKITCSGDQ---L--P---K-N-FAYWFQQKSDKNILLLIYM- 48 usage_00514.pdb 1 QSVLTQPPSASGTPGQTVTLSCSGSRT--N--A---G-RDPVSWYQQLPGTAPKLLTST- 51 usage_00541.pdb 1 -YVLTQPPSVSVAPGKTARITCGGNN---I--A---N-K-NVHWYQQKPGQAPVLVIYY- 48 G C W qq usage_00005.pdb 53 ---NNNRPPGVPARFSGSLIG--DKAALTIAGTQTEDEAIYFCALWYS----N-HWVFGG 102 usage_00024.pdb 51 KDGSHSTGDGIPDRFSGSSSG--ADRYLSISNIQPEDEAIYICGVGDTIKEQF-VYVFGG 107 usage_00025.pdb 51 KDGSHSTGDGIPDRFSGSSSG--ADRYLSISNIQPEDEAIYICGVGDTIKEQF-VYVFGG 107 usage_00028.pdb 49 ---DSDRPSGIPERFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSS--SD-HVIFGG 100 usage_00035.pdb 50 ---DSDRPSGIPERFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSS--SD-HVVFGG 101 usage_00068.pdb 49 ---DNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA----R-NVVFGG 100 usage_00101.pdb 49 ---TSTLESGIPSRFSGSGSG--RDYSFTISNLQPEDVATYYCLQYNS------LLTFGG 97 usage_00114.pdb 53 ---TDKKYSWTPGRFSGSLLG--AKAALTISDAQPEDEAEYYCSLSDV----D-GYLFGG 102 usage_00115.pdb 53 ---TDKKYSWTPGRFSGSLLG--AKAALTISDAQPEDEAEYYCSLSDV----D-GYLFGG 102 usage_00122.pdb 49 ---DSKRPSGIPERFSGSNSG--NTATLTISGTQAMDEADYYCQAWDS----S-ALVFGG 98 usage_00156.pdb 55 ---VSNRFSGVPDRFSGSGSG--TDFTLKISSVEAEDLGVYFCSQSTH------VPTFGG 103 usage_00214.pdb 50 ---NFNRPSGVPDRFSGSKSG--TSASLAITGLQAEDEADYYCQSYDSP--TL-TSPFGT 101 usage_00246.pdb 49 ---ASNLETGVPSRFSGSGSG--TDFTFTISSLQPEDIATYHCQQYDN----L-PYTFGQ 98 usage_00255.pdb 49 ---DSDRPSGIPERFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSR--GPTNWVFGG 101 usage_00256.pdb 49 ---DSDRPSGIPERFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSR--GPTNWVFGG 101 usage_00383.pdb 52 ---DNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDS----S-SWVFGG 103 usage_00438.pdb 49 ---DDDRPSGIPDRFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSN--SD-HVVFGG 100 usage_00439.pdb 49 ---DDDRPSGIPDRFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSN--SD-HVVFGG 100 usage_00440.pdb 49 ---DDDRPSGIPDRFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSN--SD-HVVFGG 100 usage_00441.pdb 49 ---DDERSSGIPERFSGSNSG--NTATLTISGVEAGDEADYYCQVWDSS--SH-HMLFGG 100 usage_00469.pdb 47 ---KNNRPSGIPDRFSGSSSG--NTASLTITGAQAEDEADYYCNSRDSS--GN-HNVFGG 98 usage_00475.pdb 49 ---DNKRPSGIPERFSGSTSG--TTATLTISGAQPEDEAAYYCLSSYGD--NN-DLVFGS 100 usage_00514.pdb 52 ---APQGPSGVPDRFSGSKSG--TSSSLAISGLQSGDEADYYCTVWDS----V-PGASVF 101 usage_00541.pdb 49 ---DDDRPSGIPDRFSGSNSG--NTATLTISRVEAGDEADYYCQVWDSN--SD-HVVFGG 100 P RFsGS I D a Y C fg usage_00005.pdb 103 GTRLTV--- 108 usage_00024.pdb 108 GTKVTV--- 113 usage_00025.pdb 108 GTKVTV--- 113 usage_00028.pdb 101 GTKLTV--- 106 usage_00035.pdb 102 GTKLTV--- 107 usage_00068.pdb 101 GTRLTV--- 106 usage_00101.pdb 98 GTKLEIKRA 106 usage_00114.pdb 103 GTQLTVL-- 109 usage_00115.pdb 103 GTQLTVL-- 109 usage_00122.pdb 99 GTKLTVL-- 105 usage_00156.pdb 104 GTKLEI--- 109 usage_00214.pdb 102 GTKLTVLG- 109 usage_00246.pdb 99 GTKLE---- 103 usage_00255.pdb 102 GTKLTV--- 107 usage_00256.pdb 102 GTKLTV--- 107 usage_00383.pdb 104 GTKLT---- 108 usage_00438.pdb 101 GTQLTV--- 106 usage_00439.pdb 101 GTQLTV--- 106 usage_00440.pdb 101 GTQLTV--- 106 usage_00441.pdb 101 GTRLTV--- 106 usage_00469.pdb 99 GTKLTVL-- 105 usage_00475.pdb 101 GTQLTVLR- 108 usage_00514.pdb 102 GSGTFL--- 107 usage_00541.pdb 101 GTQLTV--- 106 Gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################