################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:36 2021 # Report_file: c_0037_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00023.pdb # 8: usage_00024.pdb # 9: usage_00134.pdb # # Length: 246 # Identity: 49/246 ( 19.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 204/246 ( 82.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/246 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 PWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAY 60 usage_00018.pdb 1 PWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAY 60 usage_00019.pdb 1 PWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAY 60 usage_00020.pdb 1 PWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAY 60 usage_00021.pdb 1 PWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAY 60 usage_00022.pdb 1 PWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAY 60 usage_00023.pdb 1 PWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAY 60 usage_00024.pdb 1 PWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAY 60 usage_00134.pdb 1 PAARAAAFEL-HESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDG-RDLAGA 58 PwvRAyA rk lEtmdlgaELGAeiyvVWPGreGaeveatgkarkvWdwvre nfmAay usage_00017.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNF 120 usage_00018.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNF 120 usage_00019.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNF 120 usage_00020.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNF 120 usage_00021.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNF 120 usage_00022.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNF 120 usage_00023.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNF 120 usage_00024.pdb 61 AEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNF 120 usage_00134.pdb 59 NP----DVKFAIEYKPREPRVK-TWDSAARTLLGIEDIG-LDNVGVLLDFGHALYGGESP 112 ae gyrFAlEpKPnEPRgd yfatvgsmLa Ihtl perfGlnpeFaHetmaGlnf usage_00017.pdb 121 VHAVAQALDAGKLFHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDA 180 usage_00018.pdb 121 VHAVAQALDAGKLFHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDA 180 usage_00019.pdb 121 VHAVAQALDAGKLFHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDA 180 usage_00020.pdb 121 VHAVAQALDAGKLFHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDA 180 usage_00021.pdb 121 VHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLESSGYQGPRHFDA 180 usage_00022.pdb 121 VHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLESSGYQGPRHFDA 180 usage_00023.pdb 121 VHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLESSGYQGPRHFDA 180 usage_00024.pdb 121 VHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLESSGYQGPRHFDA 180 usage_00134.pdb 113 ADSAQLIIDRGRLFG-DVNDNLRG-WDDDLVVGTVH-TEIFEFFYVLKINNWQGVWQLDQ 169 vhavaqalDaGkL h DlN qrm fDqDLrfGsen kaaF lvdlLessgyQGprhfDa usage_00017.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00018.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00019.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00020.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00021.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00022.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00023.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00024.pdb 181 HALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAY---------YQEDPA 231 usage_00134.pdb 170 FPF-RE---NHVEAAQLSIRFLKHIYRALDKL-DIPALQAAQEAQNPLQAQRIVQDA--- 221 hal tE gvwafArgcmRtylilkeraeaf edPevkellaAy yqe usage_00017.pdb 232 ALALL- 236 usage_00018.pdb 232 ALALL- 236 usage_00019.pdb 232 ALALL- 236 usage_00020.pdb 232 ALALL- 236 usage_00021.pdb 232 ALPLM- 236 usage_00022.pdb 232 ALPLM- 236 usage_00023.pdb 232 ALPLM- 236 usage_00024.pdb 232 ALPLM- 236 usage_00134.pdb 222 -----L 222 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################