################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:07 2021 # Report_file: c_0707_108.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00565.pdb # 2: usage_00712.pdb # 3: usage_00713.pdb # # Length: 94 # Identity: 2/ 94 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 94 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/ 94 ( 78.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00565.pdb 1 F-----------ETSEP-----KVIENIRDQTISYISC---------------------- 22 usage_00712.pdb 1 ----IARLNPAKP----KAGEEFRLQV-----------VAQHPNEPGTRRDAEGKLIPAK 41 usage_00713.pdb 1 -FRTIARLNPAKP----KAGEEFRLQV-----------VAQHPNEPG------------- 31 p frlqv usage_00565.pdb 23 -GENHTALITD-I--------------GLMYTFG 40 usage_00712.pdb 42 -YI-NLVEVYFEGEKVAEARPGPSTSANPLYAFK 73 usage_00713.pdb 32 KYI-NL-EVY---FKVAEARPGPSTSANPLYAFK 60 yi nl evy nplYaFk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################