################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:36 2021 # Report_file: c_0013_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00001.pdb # 2: usage_00107.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00118.pdb # 8: usage_00155.pdb # # Length: 279 # Identity: 103/279 ( 36.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 132/279 ( 47.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/279 ( 3.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RIATLQTLG--GSGALKVGADFLKRYFPDSQVWLSDPSWENHRFIFERAGFTVNTYPYYD 58 usage_00107.pdb 1 --ATIATIG--GSGALKVGAEFIHEWFPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYD 56 usage_00108.pdb 1 --ATIATIG--GSGALKVGAEFIHEWFPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYD 56 usage_00109.pdb 1 --ATIATIG--GSGALKVGAEFIHEWFPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYD 56 usage_00110.pdb 1 LVATIATIG--GSGALKVGAEFIHEWFPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYD 58 usage_00111.pdb 1 --ATIATIG--GSGALKVGAEFIHEWFPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYD 56 usage_00118.pdb 1 R-VVTAQALGGT-GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYD 58 usage_00155.pdb 1 RVVTAQALG--GTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYD 58 t g g GALK GA F P k SDP W NH a F eV YPYYD usage_00001.pdb 59 EATGGLKFDAMLAAIDALPARSIVLLHACCHNPTGVDLDEGQWEKLIDVIEARELLPFVD 118 usage_00107.pdb 57 TATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMD 116 usage_00108.pdb 57 TATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMD 116 usage_00109.pdb 57 TATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMD 116 usage_00110.pdb 59 TATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMD 118 usage_00111.pdb 57 TATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMD 116 usage_00118.pdb 59 AKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLD 118 usage_00155.pdb 59 AKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLD 118 T G FD M A LH CCHNPTGVDL QW v V R L PF D usage_00001.pdb 119 MAYQGFGAGLDADAFAVRELARRGVPTLVANSFSNF-SLYGERVGGLSVVCEDAAAAERV 177 usage_00107.pdb 117 IAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVVCPTVDETERV 176 usage_00108.pdb 117 IAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVVCPTVDETERV 176 usage_00109.pdb 117 IAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVVCPTVDETERV 176 usage_00110.pdb 119 IAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVVCPTVDETERV 178 usage_00111.pdb 117 IAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVVCPTVDETERV 176 usage_00118.pdb 119 IAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARV 178 usage_00155.pdb 119 IAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSSF-SLYGERVGALSIITDSKDEAARV 177 iAYQGFGe DA A R l fVs SFS SLYGERVG LS de RV usage_00001.pdb 178 LGQLAGAVRSNYSNPQTYGAKVVAAVLGTPALRKQWEEELSAMCRRIARMRQSIHDGLRD 237 usage_00107.pdb 177 FGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEA 236 usage_00108.pdb 177 FGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEA 236 usage_00109.pdb 177 FGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEA 236 usage_00110.pdb 179 FGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEA 238 usage_00111.pdb 177 FGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEA 236 usage_00118.pdb 179 LSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA 238 usage_00155.pdb 178 LSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA 237 QL R YS Pp hGg V V L Wv E MrdRI MR l L a usage_00001.pdb 238 HV---ALTRYVKQRGMFTYTGLTESQVDALREVHGVYIL 273 usage_00107.pdb 237 KISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMI 275 usage_00108.pdb 237 KISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMI 275 usage_00109.pdb 237 KISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMI 275 usage_00110.pdb 239 KISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMI 277 usage_00111.pdb 237 KISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMI 275 usage_00118.pdb 239 AGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAV 277 usage_00155.pdb 238 AGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAV 276 f aQ GMFs GLT QV rL efGiY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################