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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:03:24 2021
# Report_file: c_0048_17.html
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#====================================
# Aligned_structures: 4
#   1: usage_00039.pdb
#   2: usage_00040.pdb
#   3: usage_00075.pdb
#   4: usage_00162.pdb
#
# Length:        246
# Identity:       66/246 ( 26.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    205/246 ( 83.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/246 ( 16.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00039.pdb         1  -KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE   50
usage_00040.pdb         1  RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE   51
usage_00075.pdb         1  -PVLVTGGARRIGKAIVEDLASHGFPVAIHCNRSLDEGEAIANRINDSGGNACVVQADLE   59
usage_00162.pdb         1  -KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE   50
                            kaLVTGGsRgIGrAIaEaLvarGyrVAIasrnpeeaaqslg         AvplptDLE

usage_00039.pdb        51  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA  110
usage_00040.pdb        52  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA  111
usage_00075.pdb        60  G-DVRGLVKQASDRIGPIRLLVNNASLFQEDKVGALDMALWDRHFAVHLKTPVILAEDMR  118
usage_00162.pdb        51  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA  110
                           k DpkGLVKrAlealGglhvLVhaAavnvrkpaleLsyeeWrRvlylHLdvaflLAqaaa

usage_00039.pdb       111  PHM-AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN  167
usage_00040.pdb       112  PHM-AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN  168
usage_00075.pdb       119  KALP-EDQDGLVVNIIDQRVWKLNP----QFFSYTLSKTALWNATRTLAQALAP-RIRVN  172
usage_00162.pdb       111  PH--AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN  166
                           ph   EagwGrVlfIgsvttfta      pipaYTtaKTALlglTRaLAkewAr gIRVN

usage_00039.pdb       168  LLCPGYVETEF--TLPLRQ-NPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTG  224
usage_00040.pdb       169  LLCPGYVET-------------ELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTG  215
usage_00075.pdb       173  AIAPGPTL-PSER-----QRPEDFER-QVSKLPLQRAPELPEFGRTVRYFWE-N-RSITG  223
usage_00162.pdb       167  LLCPGYVETEF--TLPLRQ-NPELYEPITARIP-GRWARPEEIARVAAVLCGDEAEYLTG  222
                           llcPGyve              elye itariP gRwarpeEiaRvaavlcg e eylTG

usage_00039.pdb       225  QAVAVD  230
usage_00040.pdb       216  QAVAVD  221
usage_00075.pdb       224  QMIA--  227
usage_00162.pdb       223  QAVAVD  228
                           QavA  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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