################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:15 2021 # Report_file: c_0619_26.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00139.pdb # 2: usage_00140.pdb # 3: usage_00147.pdb # 4: usage_00148.pdb # # Length: 76 # Identity: 6/ 76 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 76 ( 30.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 76 ( 18.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 -GPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHW-------AQWE 52 usage_00140.pdb 1 -GPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHW-------AQWE 52 usage_00147.pdb 1 -HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID-AALYEVQHGGHFLEDEGFT---S 55 usage_00148.pdb 1 DPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHW-------AMIE 53 e tl v g D VP ll I s l i cGHw e usage_00139.pdb 53 HADAFNQLVLNFLAR- 67 usage_00140.pdb 53 HADAFNQLVLNFLAR- 67 usage_00147.pdb 56 -LPIVYDVLTSYFSK- 69 usage_00148.pdb 54 HPEDFANATLSFLSLR 69 f l fl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################