################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:11:21 2021 # Report_file: c_0430_6.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00009.pdb # 2: usage_00016.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00044.pdb # 9: usage_00045.pdb # 10: usage_00046.pdb # 11: usage_00047.pdb # 12: usage_00048.pdb # 13: usage_00049.pdb # 14: usage_00050.pdb # 15: usage_00051.pdb # 16: usage_00087.pdb # 17: usage_00088.pdb # 18: usage_00089.pdb # 19: usage_00090.pdb # # Length: 136 # Identity: 15/136 ( 11.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/136 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/136 ( 44.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -TLAQTRDIMDFWRP-NYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFD------VSLTD 52 usage_00016.pdb 1 -RGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSIND 59 usage_00028.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00029.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00030.pdb 1 --VAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 51 usage_00031.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00032.pdb 1 --VAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 51 usage_00044.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00045.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00046.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00047.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00048.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00049.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00050.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00051.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00087.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00088.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00089.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 usage_00090.pdb 1 DAVAYTEDVYDFWRP-TGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG------KSLAD 53 a t dvyDFwrP yP VdG lS Y w ey kr Sl D usage_00009.pdb 53 FAAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKVNFEAS----ILYSKQI-------- 100 usage_00016.pdb 60 ADYFVFHSPYNKLVQKSFARLLYN------------DFLRNASSIDEAAKEKF------- 100 usage_00028.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00029.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00030.pdb 52 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 82 usage_00031.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00032.pdb 52 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 82 usage_00044.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------AD----- 79 usage_00045.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00046.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------AD----- 79 usage_00047.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00048.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------AD----- 79 usage_00049.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00050.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00051.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00087.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------AD----- 79 usage_00088.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00089.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 usage_00090.pdb 54 FASLCFHVPFTKMGKKALESIIDN-----------------------------ADETTQE 84 fa cFH Pf K K i dn usage_00009.pdb ---------------- usage_00016.pdb ---------------- usage_00028.pdb 85 RLRSGYED-------- 92 usage_00029.pdb 85 RLRSGYEDAVDYNRYV 100 usage_00030.pdb 83 RLRSGYEDAVD----- 93 usage_00031.pdb 85 RLRSGYEDA------- 93 usage_00032.pdb 83 RLRSGYEDAVDYNRYV 98 usage_00044.pdb ---------------- usage_00045.pdb 85 RLRSGYEDAVDYNRYV 100 usage_00046.pdb ---------------- usage_00047.pdb 85 RLRSGYEDAVDYNRYV 100 usage_00048.pdb ---------------- usage_00049.pdb 85 RLRSGYEDA------- 93 usage_00050.pdb 85 RLRSGYEDA------- 93 usage_00051.pdb 85 RLRSGYEDAVDYNRYV 100 usage_00087.pdb ---------------- usage_00088.pdb 85 RLRSGYEDAVDYNRYV 100 usage_00089.pdb 85 RLRSGYEDA------- 93 usage_00090.pdb 85 RLRSGYEDA------- 93 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################