################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:11 2021 # Report_file: c_0066_3.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00043.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00093.pdb # 5: usage_00096.pdb # 6: usage_00097.pdb # 7: usage_00098.pdb # 8: usage_00099.pdb # 9: usage_00100.pdb # 10: usage_00149.pdb # 11: usage_00150.pdb # 12: usage_00204.pdb # # Length: 219 # Identity: 74/219 ( 33.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/219 ( 74.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/219 ( 25.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 ----GICLRSEGSPLVVLPYMKHGDLRNFIRNET-----------HNPTVKDLIGFGLQV 45 usage_00091.pdb 1 ----YGACSQDGPLLLIVEYAKYGSLRGFLRES-----R--KV--RALTMGDLISFAWQI 47 usage_00092.pdb 1 ----YGACSQDGPLLLIVEYAKYGSLRGFLRES-----R-------ALTMGDLISFAWQI 44 usage_00093.pdb 1 -IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES-------------ALTMGDLISFAWQI 46 usage_00096.pdb 1 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG--YL--RALTMGDLISFAWQI 56 usage_00097.pdb 1 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES-----R--KV--RALTMGDLISFAWQI 51 usage_00098.pdb 1 -----GACSQDGPLLLIVEYAKYGSLRGFLRES-----R------RALTMGDLISFAWQI 44 usage_00099.pdb 1 ----YGACSQDGPLLLIVEYAKYGSLRGFLRES-------------RLTMGDLISFAWQI 43 usage_00100.pdb 1 -----GACSQDGPLLLIVEYAKYGSLRGFLRES-----RKV---ERALTMGDLISFAWQI 47 usage_00149.pdb 1 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES-----R--KVDERALTMGDLISFAWQI 53 usage_00150.pdb 1 ----YGACSQDGPLLLIVEYAKYGSLRGFLRES-----R--KV--RALTMGDLISFAWQI 47 usage_00204.pdb 1 ----YGACSQDGPLLLIVEYAKYGSLRGFLRES-----R--KV--RALTMGDLISFAWQI 47 gacsqdGplLliveYaKyGsLRgFlRes lTmgDLIsFawQi usage_00043.pdb 46 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKESVHN--------KLP 97 usage_00091.pdb 48 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 102 usage_00092.pdb 45 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 99 usage_00093.pdb 47 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 101 usage_00096.pdb 57 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----SYVKRSQGRIP 112 usage_00097.pdb 52 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 106 usage_00098.pdb 45 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 99 usage_00099.pdb 44 SQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 98 usage_00100.pdb 48 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV-EED----S-VKRSQGRIP 101 usage_00149.pdb 54 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV-EED----S-VKRSQGRIP 107 usage_00150.pdb 48 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 102 usage_00204.pdb 48 SQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED----S-VKRSQGRIP 102 sqGMqYLAemklVHRDLAARNilvaEgrkmKisDFGLsRDv eed riP usage_00043.pdb 98 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 157 usage_00091.pdb 103 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 162 usage_00092.pdb 100 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 159 usage_00093.pdb 102 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 161 usage_00096.pdb 113 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 172 usage_00097.pdb 107 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 166 usage_00098.pdb 100 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 159 usage_00099.pdb 99 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 158 usage_00100.pdb 102 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 161 usage_00149.pdb 108 VKWTAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 167 usage_00150.pdb 103 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 162 usage_00204.pdb 103 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 162 VKWmAiESLfdhiyTTqSDVWSFGVLLWEivTlGgnPYPgipperlfnlLktGhRmerPd usage_00043.pdb 158 YCPDPLYEVMLKCWH------------------------ 172 usage_00091.pdb 163 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM---- 197 usage_00092.pdb 160 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR 198 usage_00093.pdb 162 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK-- 198 usage_00096.pdb 173 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR- 210 usage_00097.pdb 167 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR- 204 usage_00098.pdb 160 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR- 197 usage_00099.pdb 159 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK-- 195 usage_00100.pdb 162 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV--- 197 usage_00149.pdb 168 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR 206 usage_00150.pdb 163 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR 201 usage_00204.pdb 163 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR 201 nCseemYrlMLqCWk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################