################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:43 2021 # Report_file: c_1367_85.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00050.pdb # 2: usage_00051.pdb # 3: usage_00486.pdb # 4: usage_00487.pdb # 5: usage_00488.pdb # 6: usage_00489.pdb # 7: usage_00490.pdb # 8: usage_00647.pdb # 9: usage_01038.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 46 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 46 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 ILDICLILLDV---NPKFLKNAGRDCSRRSSPVYVGRVVSGM---- 39 usage_00051.pdb 1 --------------NPKFLKNAGRDCSRRSSPVYVGRVVSGM---- 28 usage_00486.pdb 1 --------------NPKFLKNAGRDCSRRSSPVYVGRVGSGMV--- 29 usage_00487.pdb 1 ---------------PKFLKNAGRDCSRRSSPVYVGRVGSGMV--- 28 usage_00488.pdb 1 ---------------PKFLKNAGRDCSRRSSPVYVGRVGSGMV--- 28 usage_00489.pdb 1 ---------------PKFLKNAGRDCSRRSSPVYVGRVGSGMV--- 28 usage_00490.pdb 1 ---------------PKFLKNAGRDCSRRSSPVYVGRVGSGMV--- 28 usage_00647.pdb 1 --------------NPKFLKNAGRDCSRRSSPVYVGRVVSGMV--- 29 usage_01038.pdb 1 -----------NSSYSANVNP------ANGNYGRQTLTHEIGHTLG 29 pkflkn rrsspvyvgrv sgm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################