################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:50 2021 # Report_file: c_1431_27.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00605.pdb # 2: usage_00880.pdb # 3: usage_00881.pdb # 4: usage_00882.pdb # 5: usage_00916.pdb # 6: usage_00920.pdb # 7: usage_00956.pdb # 8: usage_00957.pdb # 9: usage_01104.pdb # 10: usage_01105.pdb # # Length: 54 # Identity: 2/ 54 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 54 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 54 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00605.pdb 1 -----QQKELVQILLGAHTRHVGPLFDQFVQFRPPAYLFM-------------- 35 usage_00880.pdb 1 -PEKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRL-- 43 usage_00881.pdb 1 -PEKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRLL- 44 usage_00882.pdb 1 --EKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRLL- 43 usage_00916.pdb 1 --EKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRL-- 42 usage_00920.pdb 1 -PEKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRLLP 45 usage_00956.pdb 1 ---KKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRLL- 42 usage_00957.pdb 1 --EKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRL-- 42 usage_01104.pdb 1 YPEKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRL-- 44 usage_01105.pdb 1 -PEKKATLYFLVLGFLALIVGSLFGPFQALNY--------GNVDAYPLLKRLLP 45 atlyflvlgflAlivgslfgpfQalny #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################