################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:43 2021 # Report_file: c_1148_250.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00926.pdb # 2: usage_03104.pdb # 3: usage_03105.pdb # 4: usage_03106.pdb # 5: usage_03778.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 39 ( 17.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 39 ( 48.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00926.pdb 1 -RHLVFSP-D--GQYAFLAGEL--S-SQIASLKYDT--- 29 usage_03104.pdb 1 -STLTASF-S--GNTLTINCGEA-GKSISFTVTITYPS- 33 usage_03105.pdb 1 -STLTASF-S--GNTLTINCGEA-GKSISFTVTITYPS- 33 usage_03106.pdb 1 -STLTASF-S--GNTLTINCGEA-GKSISFTVTITYPS- 33 usage_03778.pdb 1 SVTRQVLFSGNGLTGELRYFEVGPGGH-----------S 28 tl sf g g s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################