################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:25 2021 # Report_file: c_1089_107.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_01254.pdb # 6: usage_01255.pdb # 7: usage_01362.pdb # 8: usage_01363.pdb # 9: usage_01526.pdb # 10: usage_01527.pdb # 11: usage_01528.pdb # 12: usage_01529.pdb # # Length: 65 # Identity: 21/ 65 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 65 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 65 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 -GDRLWASLERMAQIGATPKGGVCRLALTDLDRESRDLFVQWAREAGCTVRVDRMGNVFA 59 usage_00057.pdb 1 -GDRLWASLERMAQIGATPKGGVCRLALTDLDRESRDLFVQWAREAGCTVRVDRMGNVFA 59 usage_00058.pdb 1 -GDRLWASLERMAQIGATPKGGVCRLALTDLDRESRDLFVQWAREAGCTVRVDRMGNVFA 59 usage_00059.pdb 1 -GDRLWASLERMAQIGATPKGGVCRLALTDLDRESRDLFVQWAREAGCTVRVDRMGNVFA 59 usage_01254.pdb 1 QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIG 60 usage_01255.pdb 1 --ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIG 58 usage_01362.pdb 1 -GRRLWDSLMEVAKIGATPKGGVCRLALTDLDKAARDLIVGWAKAAGCTVTVDTMGNVFM 59 usage_01363.pdb 1 -GRRLWDSLMEVAKIGATPKGGVCRLALTDLDKAARDLIVGWAKAAGCTVTVDTMGNVFM 59 usage_01526.pdb 1 --KRLWNSLMEMAKIGATPKGGVCRLALTDLDKAGRDLIVRWAKEAGCTVTVDTMGNVFM 58 usage_01527.pdb 1 --KRLWNSLMEMAKIGATPKGGVCRLALTDLDKAGRDLIVRWAKEAGCTVTVDTMGNVFM 58 usage_01528.pdb 1 -GKRLWNSLMEMAKIGATPKGGVCRLALTDLDKAGRDLIVRWAKEAGCTVTVDTMGNVFM 59 usage_01529.pdb 1 --KRLWNSLMEMAKIGATPKGGVCRLALTDLDKAGRDLIVRWAKEAGCTVTVDTMGNVFM 58 RLW L G P GGV RL T DL AG V D GN usage_00056.pdb 60 RRAGR 64 usage_00057.pdb 60 RRAGR 64 usage_00058.pdb 60 RRAGR 64 usage_00059.pdb 60 RRAGR 64 usage_01254.pdb 61 RKEGT 65 usage_01255.pdb 59 RKEGT 63 usage_01362.pdb 60 RRAGR 64 usage_01363.pdb 60 RRAGR 64 usage_01526.pdb 59 RRAGR 63 usage_01527.pdb 59 R---- 59 usage_01528.pdb 60 RRAGR 64 usage_01529.pdb 59 R---- 59 R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################