################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:46:40 2021 # Report_file: c_0699_77.html ################################################################################################ #==================================== # Aligned_structures: 41 # 1: usage_00038.pdb # 2: usage_00079.pdb # 3: usage_00081.pdb # 4: usage_00209.pdb # 5: usage_00232.pdb # 6: usage_00304.pdb # 7: usage_00305.pdb # 8: usage_00333.pdb # 9: usage_00506.pdb # 10: usage_00513.pdb # 11: usage_00672.pdb # 12: usage_00689.pdb # 13: usage_00811.pdb # 14: usage_00854.pdb # 15: usage_00900.pdb # 16: usage_00948.pdb # 17: usage_00978.pdb # 18: usage_01025.pdb # 19: usage_01026.pdb # 20: usage_01027.pdb # 21: usage_01166.pdb # 22: usage_01173.pdb # 23: usage_01174.pdb # 24: usage_01247.pdb # 25: usage_01254.pdb # 26: usage_01255.pdb # 27: usage_01256.pdb # 28: usage_01257.pdb # 29: usage_01359.pdb # 30: usage_01431.pdb # 31: usage_01432.pdb # 32: usage_01433.pdb # 33: usage_01434.pdb # 34: usage_01455.pdb # 35: usage_01524.pdb # 36: usage_01553.pdb # 37: usage_01561.pdb # 38: usage_01648.pdb # 39: usage_01665.pdb # 40: usage_01763.pdb # 41: usage_01764.pdb # # Length: 72 # Identity: 8/ 72 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 72 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 72 ( 52.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPST-WR---PSETVTCNVAHPA 53 usage_00079.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-PR---PSETVTCNVAHPA 53 usage_00081.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_00209.pdb 1 -SVTVTAN--SGSLS--VHTFPALLQSDLYTMSSSVTVPSS-T----WSETVTCSVAHPA 50 usage_00232.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_00304.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_00305.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_00333.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PR---PSETVTCNVAHPA 53 usage_00506.pdb 1 -SITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPS----------HVVCKVQHP- 48 usage_00513.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_00672.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_00689.pdb 1 -TFSWKYK--NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDV-MQGTDEHVVCKVQHP- 55 usage_00811.pdb 1 --VTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 52 usage_00854.pdb 1 -SVTVTWN--SGSLSSSVHTFPALLQSGLYTMSSSVTVPSS-TW---PSETVTCSVAHPA 53 usage_00900.pdb 1 --VTVTWN--SGSLSSSVHTFPALLQSGLYTMSSSVTVPSS-TW---PSQTVTCSVAHPA 52 usage_00948.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_00978.pdb 1 EPVTVTWN--SGALSSGVHTFPAVLQSDLYTLSSSVTVPAS-TW---PSGTVTCNVAHPA 54 usage_01025.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01026.pdb 1 --VTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 52 usage_01027.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01166.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01173.pdb 1 -SVTVTWN--SGSLSSSVHTFPALLQSGLYTMSSSVTVPSS-TW---PSQTVTCSVAHPA 53 usage_01174.pdb 1 -SVTVTWN--SGSLSSSVHTFPALLQSGLYTMSSSVTVPSS-TW---PSQTVTCSVAHPA 53 usage_01247.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01254.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01255.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01256.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01257.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-TW---PSETVTCNVAHPA 53 usage_01359.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_01431.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLS-------------------TCNVAHPA 38 usage_01432.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVT-------------TVTCNVAHPA 44 usage_01433.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLS-------------------TCNVAHPA 38 usage_01434.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVT-------------TVTCNVAHPA 44 usage_01455.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-TW---PSQSITCNVAHPA 53 usage_01524.pdb 1 -PVTLTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSS-T-----WPTITCNVAHPA 51 usage_01553.pdb 1 -PVTVTWN--S-------HTFPAVLQSGLYTLTSSVT--------------VTCNVAHPA 36 usage_01561.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PR---PSETVTCNVAHPA 53 usage_01648.pdb 1 -PVTVTWN--S-G----VHTFPAVLQSDLYTLSSSVTV----P-----SETVTCNVAHPA 43 usage_01665.pdb 1 -SVTVTWN--SGSLSSSVHTFPALLQSGLYTMSSSVTVPSS-TW---PSQTVTCSVAHPA 53 usage_01763.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLS-------------------TCNVAHPA 38 usage_01764.pdb 1 -PVTVTWN--SGSLSSGVHTFPAVLQSDLYTLSSSVT-------------TVTCNVAHPA 44 t FP L Y C V HP usage_00038.pdb 54 SSTKVD------ 59 usage_00079.pdb 54 SSTKVDKKIV-- 63 usage_00081.pdb 54 SSTKVDK----- 60 usage_00209.pdb 51 SSTTVDKKA--- 59 usage_00232.pdb 54 SSTKVDKK---- 61 usage_00304.pdb 54 SSTKVDK----- 60 usage_00305.pdb 54 SSTKVDK----- 60 usage_00333.pdb 54 SSTKVDKK---- 61 usage_00506.pdb 49 N-GNKEKDVPLP 59 usage_00513.pdb 54 SSTKVDKK---- 61 usage_00672.pdb 54 SSTKVDKK---- 61 usage_00689.pdb 56 N-GNKEKN---- 62 usage_00811.pdb 53 SSTKVDKKIVP- 63 usage_00854.pdb 54 SSTTVDK----- 60 usage_00900.pdb 53 SSTTVDK----- 59 usage_00948.pdb 54 SSTKVDKKI--- 62 usage_00978.pdb 55 SSTAVDKKIVP- 65 usage_01025.pdb 54 SSTKVDKK---- 61 usage_01026.pdb 53 SSTKVDKK---- 60 usage_01027.pdb 54 SSTKVDKK---- 61 usage_01166.pdb 54 SSTKVDKK---- 61 usage_01173.pdb 54 SSTTVDK----- 60 usage_01174.pdb 54 SSTTVDK----- 60 usage_01247.pdb 54 SSTKVDKKIVP- 64 usage_01254.pdb 54 SSTKVDKKIVP- 64 usage_01255.pdb 54 SSTKVDKKIVP- 64 usage_01256.pdb 54 SSTKVDK----- 60 usage_01257.pdb 54 SSTKVDKK---- 61 usage_01359.pdb 54 SSTKVDKKIEP- 64 usage_01431.pdb 39 SSTKVDKK---- 46 usage_01432.pdb 45 SSTKVDKK---- 52 usage_01433.pdb 39 SSTKVD------ 44 usage_01434.pdb 45 SSTKVDKKIVP- 55 usage_01455.pdb 54 SSTKVDKK---- 61 usage_01524.pdb 52 SSTKVDKK---- 59 usage_01553.pdb 37 SSTKVD------ 42 usage_01561.pdb 54 SSTKVDKKII-- 63 usage_01648.pdb 44 SSTKVDKKIVP- 54 usage_01665.pdb 54 SSTTVDKK---- 61 usage_01763.pdb 39 SSTKVD------ 44 usage_01764.pdb 45 SSTKVDKKIVP- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################