################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:26 2021 # Report_file: c_1434_31.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01724.pdb # 2: usage_02355.pdb # 3: usage_02356.pdb # 4: usage_02357.pdb # 5: usage_02358.pdb # 6: usage_02359.pdb # 7: usage_02360.pdb # 8: usage_03343.pdb # # Length: 108 # Identity: 17/108 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/108 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/108 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01724.pdb 1 -LLIEQANHAIEKGEHQLLYLQHQLDELNENK-------SKELQEKIIRELDVVCAMIEG 52 usage_02355.pdb 1 -----------KKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 42 usage_02356.pdb 1 --LMERIHEQIKKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 51 usage_02357.pdb 1 --LMERIHEQIKKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 51 usage_02358.pdb 1 -SLMERIHEQIKKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 52 usage_02359.pdb 1 NSLMERIHEQIKKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 53 usage_02360.pdb 1 --LMERIHEQIKKGELALFYLQEQINHFEEKP-------TKEMKDKIVAEMDTIIAMIDG 51 usage_03343.pdb 1 -----------------FHEIEKFLLHITHEVDDLEKTGNKDEKARLLRELTVSEAFIEG 43 l ylq q h e Ke k ki E d AmI G usage_01724.pdb 53 AQGALERELKRTD-LNILERFNYEEAQTLSKILLKDLKETEQKVKD-- 97 usage_02355.pdb 43 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKKI- 88 usage_02356.pdb 52 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKKI- 97 usage_02357.pdb 52 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKKI- 97 usage_02358.pdb 53 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKK-- 97 usage_02359.pdb 54 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKKI- 99 usage_02360.pdb 52 VRGVLDRLM-QRKDLDIFEQYNLEMAKKSGDILERDLKKEEARVKK-- 96 usage_03343.pdb 44 SRGYFQREL-KRTDLDLLEKFNFEAALATGDLLLKDLKALQKRVQDSE 90 rG l R r Ldi E N E A gdiL DLK e rVk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################