################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:52 2021 # Report_file: c_1148_252.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00348.pdb # 2: usage_01288.pdb # 3: usage_01593.pdb # 4: usage_01594.pdb # 5: usage_01595.pdb # 6: usage_02191.pdb # 7: usage_02192.pdb # 8: usage_02470.pdb # 9: usage_02472.pdb # 10: usage_02473.pdb # 11: usage_03458.pdb # 12: usage_03677.pdb # 13: usage_03678.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 48 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 48 ( 70.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00348.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_01288.pdb 1 -------------KKITGKL-----TAEQTFTIEGMIQGNGFEGTAKT 30 usage_01593.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_01594.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_01595.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_02191.pdb 1 E-RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 31 usage_02192.pdb 1 E-RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 31 usage_02470.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_02472.pdb 1 E-RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 31 usage_02473.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_03458.pdb 1 -N-VVRN--GSQILGVQTNDPTLGP------NGFIPVT---------- 28 usage_03677.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 usage_03678.pdb 1 --RVVRNALNSEIESLHIHD-----LIS-GDRFEIKAD---------- 30 d ei #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################