################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:52:40 2021 # Report_file: c_0851_52.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00038.pdb # 2: usage_00043.pdb # 3: usage_00115.pdb # 4: usage_00116.pdb # 5: usage_00300.pdb # 6: usage_00504.pdb # 7: usage_00517.pdb # 8: usage_00522.pdb # 9: usage_00528.pdb # 10: usage_00530.pdb # 11: usage_00531.pdb # 12: usage_00532.pdb # 13: usage_00535.pdb # 14: usage_00536.pdb # 15: usage_00767.pdb # 16: usage_00769.pdb # 17: usage_00770.pdb # # Length: 65 # Identity: 4/ 65 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 65 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 65 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 -KTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 52 usage_00043.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEE---RAQLLRNAYSWGM--DFEEMERQNLLK 52 usage_00115.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00116.pdb 1 -KTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 52 usage_00300.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00504.pdb 1 --TLLVSKFLETGCQQG---ERALLFAYEES--RAQLSRNASSWGI--DFEELERRGLLR 51 usage_00517.pdb 1 ---ESRVLLLISNVRNLADLESVRIEVVA--YSGVNVL--RRDSEYSGDVSELTGQGVRF 53 usage_00522.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00528.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00530.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00531.pdb 1 -KTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 52 usage_00532.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00535.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00536.pdb 1 -KTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 52 usage_00767.pdb 1 GKTLLVSRFVENACANK---ERAILFAYEES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00769.pdb 1 GKTLLVSRFVENACANK---ERAILFAYAES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 usage_00770.pdb 1 GKTLLVSRFVENACANK---ERAILFAYAES--RAQLLRNAYSWGM--DFEEMERQNLLK 53 llvs f e c n Era lfay raqll a swg DfeE erq ll usage_00038.pdb 53 IVC-- 55 usage_00043.pdb 53 IVC-- 55 usage_00115.pdb 54 IVC-- 56 usage_00116.pdb 53 IVCA- 56 usage_00300.pdb 54 IVC-- 56 usage_00504.pdb 52 IIC-- 54 usage_00517.pdb 54 CAC-- 56 usage_00522.pdb 54 IVCAY 58 usage_00528.pdb 54 IVC-- 56 usage_00530.pdb 54 IVCA- 57 usage_00531.pdb 53 IVC-- 55 usage_00532.pdb 54 IVC-- 56 usage_00535.pdb 54 IVC-- 56 usage_00536.pdb 53 IVC-- 55 usage_00767.pdb 54 IVC-- 56 usage_00769.pdb 54 IVC-- 56 usage_00770.pdb 54 IVCAY 58 i C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################