################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:19:49 2021 # Report_file: c_0103_2.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00014.pdb # 9: usage_00015.pdb # 10: usage_00039.pdb # 11: usage_00040.pdb # 12: usage_00041.pdb # 13: usage_00043.pdb # 14: usage_00044.pdb # 15: usage_00045.pdb # 16: usage_00046.pdb # 17: usage_00047.pdb # 18: usage_00066.pdb # 19: usage_00068.pdb # 20: usage_00070.pdb # # Length: 193 # Identity: 94/193 ( 48.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 108/193 ( 56.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/193 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00007.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00009.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00010.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00011.pdb 1 SYEEAMTRRVLQPLKLAHTWITVPQSEQKNYAWGYREGKPVHVSPGQLDAEAYGVKSSVI 60 usage_00012.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00013.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00014.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00015.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAGGVKSTIE 60 usage_00039.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00040.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00041.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00043.pdb 1 -----------------------PKAEEAHYAWGYRDGKAVHVSPGMLDAEAYGVKTNVQ 37 usage_00044.pdb 1 -----------------------PKAEEAHYAWGYRDGKAVHVSPGMLDAEAYGVKTNVQ 37 usage_00045.pdb 1 SYEQAITTRVFKPLKLDHTWINVPKAEEAHYAWGYRDGKAVHVSPGMLDAEAYGVKTNVQ 60 usage_00046.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00047.pdb 1 -----------------------PSAEEKNYAWGYREGKAVHVSPRALDAEAYGVKSTIE 37 usage_00066.pdb 1 -----------------------PPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 37 usage_00068.pdb 1 SFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIE 60 usage_00070.pdb 1 -----------------------PKAEEAHYAWGYRDGKAVRVSPGMLDAQAYGVKTNVQ 37 P aEe YAWGYR GKaVhVSPg LDAeAyGVK usage_00006.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSK 97 usage_00007.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00009.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGS- 96 usage_00010.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00011.pdb 61 DMARWVQANMDASHVQEKTLQQGIELAQSRYWRIGDMYQGLGWEMLNWPLKADSIINGSD 120 usage_00012.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 97 usage_00013.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00014.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 97 usage_00015.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00039.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00040.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGD- 119 usage_00041.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00043.pdb 38 DMASWVMVNMKPDSLQDNSLRKGLTLAQSRYWRVGAMYQGLGWEMLNWPVDAKTVVEGSD 97 usage_00044.pdb 38 DMASWVMVNMKPDSLQDNSLRKGLTLAQSRYWRVGAMYQGLGWEMLNWPVDAKTVVEGSD 97 usage_00045.pdb 61 DMASWVMVNMKPDSLQDNSLRKGLTLAQSRYWRVGAMYQGLGWEMLNWPVDAKTVVEGSD 120 usage_00046.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 97 usage_00047.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDIIINNK- 96 usage_00066.pdb 38 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 97 usage_00068.pdb 61 DMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSD 120 usage_00070.pdb 38 DMANWVMANMAPENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEANTVVEGSD 97 DMA WV N p L G LAQSRYW G MYQGLGWEML WPv g usage_00006.pdb 98 --IALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 155 usage_00007.pdb 121 AKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00009.pdb 97 --DNLAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 154 usage_00010.pdb 121 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00011.pdb 121 SKVALAALPAVEVNPPVPAVKASWVHKTGSTGGFGSYVAFVPEKNLGIVMLANKSYPNPV 180 usage_00012.pdb 98 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 157 usage_00013.pdb 121 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00014.pdb 98 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 157 usage_00015.pdb 121 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00039.pdb 121 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00040.pdb 120 ---NLAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 176 usage_00041.pdb 121 ---NLAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 177 usage_00043.pdb 98 NKVALAPLPAREVNPPAPPVNASWVHKTGSTGGFGSYVAFIPEKQLGIVMLANKSYPNPA 157 usage_00044.pdb 98 NKVALAPLPAREVNPPAPPVNASWVHKTGSTGGFGSYVAFIPEKQLGIVMLANKSYPNPA 157 usage_00045.pdb 121 NKVALAPLPAREVNPPAPPVNASWVHKTGSTGGFGSYVAFIPEKQLGIVMLANKSYPNPA 180 usage_00046.pdb 98 --IALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 155 usage_00047.pdb 97 --IALAARPVKPITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 154 usage_00066.pdb 98 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 157 usage_00068.pdb 121 NKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPA 180 usage_00070.pdb 98 SKVALAPLPVAEVNPPAPPVKASWVHKTGSTGGFGSYVAFIPEKQIGIVMLANTSYPNPA 157 LA P PP P V ASWVHKTG TGGFGSYVAFiPEK lGIVMLANk YPNPa usage_00006.pdb 156 RVDAAWQILNALQ 168 usage_00007.pdb 181 RVDAAWQILNALQ 193 usage_00009.pdb 155 RVDAAWQILNALQ 167 usage_00010.pdb 181 RVDAAWQILNALQ 193 usage_00011.pdb 181 RVEAAWRILEKLQ 193 usage_00012.pdb 158 RVDAAWQILNALQ 170 usage_00013.pdb 181 RVDAAWQILNALQ 193 usage_00014.pdb 158 RVDAAWQILNALQ 170 usage_00015.pdb 181 RVDAAWQILNALQ 193 usage_00039.pdb 181 RVDAAWQILNALQ 193 usage_00040.pdb 177 RVDAAWQILNALQ 189 usage_00041.pdb 178 RVDAAWQILNALQ 190 usage_00043.pdb 158 RVEAAYRILSAL- 169 usage_00044.pdb 158 RVEAAYRILSAL- 169 usage_00045.pdb 181 RVEAAYRILSAL- 192 usage_00046.pdb 156 RVDAAWQILNALQ 168 usage_00047.pdb 155 RVAAAWQILNALQ 167 usage_00066.pdb 158 RVDAAWQILNALQ 170 usage_00068.pdb 181 RVDAAWQILNALQ 193 usage_00070.pdb 158 RVEAAYHILE--- 167 RV AA IL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################