################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:25:22 2021 # Report_file: c_1320_28.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00003.pdb # 2: usage_00012.pdb # 3: usage_00120.pdb # 4: usage_00121.pdb # 5: usage_00129.pdb # 6: usage_00136.pdb # 7: usage_00137.pdb # 8: usage_00138.pdb # 9: usage_00196.pdb # 10: usage_00252.pdb # 11: usage_00294.pdb # 12: usage_00295.pdb # 13: usage_00324.pdb # 14: usage_00325.pdb # 15: usage_00359.pdb # 16: usage_00415.pdb # 17: usage_00416.pdb # 18: usage_00417.pdb # 19: usage_00418.pdb # 20: usage_00458.pdb # 21: usage_00459.pdb # 22: usage_00460.pdb # 23: usage_00467.pdb # 24: usage_00531.pdb # 25: usage_00532.pdb # 26: usage_00534.pdb # 27: usage_00558.pdb # # Length: 31 # Identity: 10/ 31 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 31 ( 41.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 31 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 EADDAATYYCQQNNEAPFTFGSGTKLEIKRA 31 usage_00012.pdb 1 QAEDLALYYCQQHYSPPWTFGGGTKLEIKRA 31 usage_00120.pdb 1 EADDVATYYCQQTNVDPWAFGGGTKLEIKRA 31 usage_00121.pdb 1 EADDVATYYCQQTNVDPWAFGGGTKLEIKRA 31 usage_00129.pdb 1 -TDDAATYYCQQNNEDPWTFGGGTKLEIKRG 30 usage_00136.pdb 1 -SEDIANYYCQQSNRWPFTFGSGTKLEIKRA 30 usage_00137.pdb 1 -AEDLGVYFCSQNTHVPYTFGGGTKLEIKRA 30 usage_00138.pdb 1 -ADDVATYYCQQSNEVPLTFGAGTKLDLKRA 30 usage_00196.pdb 1 EADDVATYYCQQSNEDPYTFGGGTKLEIKRA 31 usage_00252.pdb 1 EEDDSAMYFCQQSKEVPWTFGGGTKLE---- 27 usage_00294.pdb 1 EADDAATYYCQQNNEDPWTFGGGTKLEIKRA 31 usage_00295.pdb 1 EADDAATYYCQQNNEDPWTFGGGTKLEIKRA 31 usage_00324.pdb 1 -ADDAATYYCQQNNEDPWTFGGGTKLEI--- 27 usage_00325.pdb 1 EADDAATYYCQQNNEDPWTFGGGTKLEI--- 28 usage_00359.pdb 1 EADDVATYYCQQSNEDPRTFGGGTKLEI--- 28 usage_00415.pdb 1 EAEDTATYYCQHSWEIPYTFGGGTKLEIKRA 31 usage_00416.pdb 1 EAEDTATYYCQHSWEIPYTFGGGTKLEIKRA 31 usage_00417.pdb 1 EAEDTATYYCQHSWEIPYTFGGGTKLEIKRA 31 usage_00418.pdb 1 EAEDTATYYCQHSWEIPYTFGGGTKLEIKRA 31 usage_00458.pdb 1 -EEDAATYYCQQIIEDPWTFGGGTKLEIKRA 30 usage_00459.pdb 1 EEEDAATYYCQQIIEDPWTFGGGTKLEIKRA 31 usage_00460.pdb 1 -EEDAATYYCQQIIEDPWTFGGGTKLEIKRA 30 usage_00467.pdb 1 QAEDLAVYYCQQHYSTPWTFGGGTKLEIKRA 31 usage_00531.pdb 1 EADDAATYYCQQNNVDPWTFGGGTKLEI--- 28 usage_00532.pdb 1 EADDAATYYCQQNNVDPWTFGGGTKLEI--- 28 usage_00534.pdb 1 EADDAATYYCQQNNVDPWTFGGGTKLEIKRA 31 usage_00558.pdb 1 EADDVATYYCQQTNVDPWAFGGGTKLEIKRA 31 D a Y Cq P FG GTKLe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################