################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:25:18 2021 # Report_file: c_1298_90.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00139.pdb # 4: usage_00140.pdb # 5: usage_00195.pdb # 6: usage_00196.pdb # 7: usage_00197.pdb # 8: usage_00198.pdb # 9: usage_00503.pdb # 10: usage_00504.pdb # 11: usage_00505.pdb # 12: usage_00506.pdb # 13: usage_00508.pdb # 14: usage_01000.pdb # 15: usage_01059.pdb # 16: usage_01060.pdb # 17: usage_01061.pdb # 18: usage_01124.pdb # 19: usage_01125.pdb # 20: usage_01126.pdb # 21: usage_01650.pdb # 22: usage_01651.pdb # 23: usage_01726.pdb # 24: usage_01784.pdb # 25: usage_01785.pdb # 26: usage_01992.pdb # 27: usage_01993.pdb # # Length: 46 # Identity: 16/ 46 ( 34.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 46 ( 54.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 46 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -VDRSAAYAMRWVAKNVVAAGLAERVEVQVAYAIGKAAPVGLFVET 45 usage_00035.pdb 1 -VDRSAAYAMRWVAKNVVAAGLAERVEVQVAYAIGKAAPVGLFVET 45 usage_00139.pdb 1 -VDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFIET 45 usage_00140.pdb 1 -VDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFIET 45 usage_00195.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 46 usage_00196.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_00197.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_00198.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 46 usage_00503.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_00504.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_00505.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_00506.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 46 usage_00508.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_01000.pdb 1 -VDRSGAYMARLVAKSIVFSGLCSRCLVQVSYGIGIARPLSLYINT 45 usage_01059.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAE-------- 37 usage_01060.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIVET- 45 usage_01061.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_01124.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 46 usage_01125.pdb 1 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 46 usage_01126.pdb 1 -VDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET 45 usage_01650.pdb 1 -VDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDT 45 usage_01651.pdb 1 -VDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDT 45 usage_01726.pdb 1 -VDRSAAYAMRWVAKNVVAAGLAERVEVQVAYAIGKAAPVGLFVET 45 usage_01784.pdb 1 -VDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDC 45 usage_01785.pdb 1 -VDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNT 45 usage_01992.pdb 1 -VDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDT 45 usage_01993.pdb 1 -VDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDT 45 VDRS aYa R vAKn VaaGLa Qv YaIG A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################