################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:46 2021 # Report_file: c_0104_4.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00014.pdb # 2: usage_00023.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00063.pdb # 6: usage_00064.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # 9: usage_00075.pdb # 10: usage_00084.pdb # 11: usage_00085.pdb # 12: usage_00090.pdb # # Length: 199 # Identity: 60/199 ( 30.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/199 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/199 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 ETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRA 60 usage_00023.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00043.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00044.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00063.pdb 1 -----PGIVNDFRQAVANAREAGFDLVELHSAHGFLLHQFLSPSSNQRTDQYGGSVENRA 55 usage_00064.pdb 1 ELEELAGIVDDFRKAAANSIEAGFDGVEVHGANGYLLEQFAKDGANMRTDTYGGSVENRA 60 usage_00073.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00074.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSANGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00075.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00084.pdb 1 ETDGIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRA 60 usage_00085.pdb 1 ELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 60 usage_00090.pdb 1 -----PGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRA 55 pGIV D RqA a AGFD VE H A L QFl N RTDqYGGS ENRA usage_00014.pdb 61 RFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT--DDEPEAMAFYLAGELDRRGLAYLHF 118 usage_00023.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00043.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00044.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00063.pdb 56 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 114 usage_00064.pdb 61 RLMLEVTAAVAQEIGPERTGIRISPV-SPANGI-SCSDPQTQYDYIVDKLDALGIAYIHV 118 usage_00073.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00074.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00075.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00084.pdb 61 RFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT--DDEPEAMAFYLAGELDRRGLAYLHF 118 usage_00085.pdb 61 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 119 usage_00090.pdb 56 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN-GPNEEADALYLIEELAKRGIAYLHM 114 R LEVvdAV R GIR P ea a Yl eL rG AYlH usage_00014.pdb 119 NE-PD--------------TYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAV 163 usage_00023.pdb 120 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 169 usage_00043.pdb 120 SE-T-----GKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 165 usage_00044.pdb 120 SE-T-D----KPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 165 usage_00063.pdb 115 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 164 usage_00064.pdb 119 VEP-------------------F-DYGSLRRRFSRTYIAN---DLELATSHLADGRADLI 155 usage_00073.pdb 120 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 169 usage_00074.pdb 120 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 169 usage_00075.pdb 120 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 169 usage_00084.pdb 119 NE-PDW--------IGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAV 169 usage_00085.pdb 120 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 169 usage_00090.pdb 115 SE-T-DLAGGKPYS--------EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAV 164 E e fr R RF g I a A Dav usage_00014.pdb 164 AFGRPFIANPDLPERFRL- 181 usage_00023.pdb 170 AFGRDYIAN---------- 178 usage_00043.pdb 166 AFGRDYIANPDLVARLQKK 184 usage_00044.pdb 166 AFGRDYIAN---------- 174 usage_00063.pdb 165 AFGRDYIANPDLVARLQK- 182 usage_00064.pdb 156 AFGRPFIANPDLVERLQS- 173 usage_00073.pdb 170 AFGRDYIANPDLVARLQK- 187 usage_00074.pdb 170 AFGRDYIANPDLVARLQK- 187 usage_00075.pdb 170 AFGRDYIANPDLVARLQKK 188 usage_00084.pdb 170 AFGRPFIAN---------- 178 usage_00085.pdb 170 AFGRDYIAN---------- 178 usage_00090.pdb 165 AFGRDYIAN---------- 173 AFGR IAN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################