################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:02 2021 # Report_file: c_0102_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00037.pdb # 2: usage_00083.pdb # 3: usage_00085.pdb # 4: usage_00120.pdb # 5: usage_00128.pdb # 6: usage_00129.pdb # 7: usage_00236.pdb # 8: usage_00237.pdb # 9: usage_00262.pdb # 10: usage_00279.pdb # # Length: 204 # Identity: 95/204 ( 46.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/204 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/204 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 GKSVTQQSLAKWSNADVVVYVGSGERGNEMTDVLVEFPELTDPKTGG--P-LMHRTVLIA 57 usage_00083.pdb 1 GKTVVQHQIAKWSDVDLVVYVGCGERGNE-TDVVNEFPELIDPNTGE---SL-ERTVLIA 55 usage_00085.pdb 1 GKTVVQHQIAKWSDVDLVVYVGCGERGNE-TDVVNEFPELIDPNTGE---SL-ERTVLIA 55 usage_00120.pdb 1 GKTVISQSLSKYSNSDAIIYVGCGERGNEMAEVLMEFPELYTEMSGTKEP-IMKRTTLVA 59 usage_00128.pdb 1 GKTVLNQQIAKWADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKTGK--P-LMYRTILIA 57 usage_00129.pdb 1 GKTVLNQQIAKWADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKTGK--P-LMYRTILIA 57 usage_00236.pdb 1 GKTVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGE--S-LMERTVLIA 57 usage_00237.pdb 1 GKTVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGE--S-LMERTVLIA 57 usage_00262.pdb 1 GKTVLNQQIAKWADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKTGK--P-LMYRTILIA 57 usage_00279.pdb 1 GKTVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGE--S-LMERTVLIA 57 GKtV aKw D v Y GcGERGNE t V EFP L dp tG l RT LiA usage_00037.pdb 58 NTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEG 117 usage_00083.pdb 56 NTSN-PVAAREASIYTGITIAEYFRDG-YDVA-IADSTSRWAEALRES-GRLE-EPGDEG 110 usage_00085.pdb 56 NTSN-PVAAREASIYTGITIAEYFRDG-YDVA-IADSTSRWAEALRES-GRLE-EPGDEG 110 usage_00120.pdb 60 NTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQG 119 usage_00128.pdb 58 NTSNMPIAAREASIYLGATIGEYFRDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEG 117 usage_00129.pdb 58 NTSNMPIAAREASIYLGATIGEYFRDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEG 117 usage_00236.pdb 58 NTSNMPVAAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEG 117 usage_00237.pdb 58 NTSNMPVAAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEG 117 usage_00262.pdb 58 NTSNMPIAAREASIYLGATIGEYFRDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEG 117 usage_00279.pdb 58 NTSNMPVAAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEG 117 NTSN P AAREASIY G Ti EYFRD V ADStSRWAEALRE RL P eG usage_00037.pdb 118 YPPYLAARLAAFYERAGKVITLG--GEEGAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFW 175 usage_00083.pdb 111 YPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFW 170 usage_00085.pdb 111 YPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFW 170 usage_00120.pdb 120 FPAYLGAKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFW 179 usage_00128.pdb 118 YPAYLLRKLAEFYERSGRVRTLN--DLEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALW 175 usage_00129.pdb 118 YPAYLLRKLAEFYERSGRVRTLN--DLEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALW 175 usage_00236.pdb 118 YPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFW 177 usage_00237.pdb 118 YPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFW 177 usage_00262.pdb 118 YPAYLLRKLAEFYERSGRVRTLN--DLEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALW 175 usage_00279.pdb 118 YPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFW 177 yPaYL LA YER G v L eGs t AVSP GGD SePVTq TLr v W usage_00037.pdb 176 RLDASLAFRRHFPAINWNGSYSLF 199 usage_00083.pdb 171 GLDSSLAQKRHFPSINWIQSYSLY 194 usage_00085.pdb 171 GLDSSLAQKRHFPSINWIQSYSLY 194 usage_00120.pdb 180 GLDKKLAQRKHFPSINTSVSYSKY 203 usage_00128.pdb 176 ALDSKLAYKRHYPAINYLISYTKQ 199 usage_00129.pdb 176 ALDSKLAYKRHYPAINYLISYTKQ 199 usage_00236.pdb 178 GLDSSLAQKRHFPSINWIQSYSLY 201 usage_00237.pdb 178 GLDSSLAQKRHFPSINWIQSYSLY 201 usage_00262.pdb 176 ALDSKLAYKRHYPAINYLISYTKQ 199 usage_00279.pdb 178 GLDSSLAQKRHFPSINWIQSYSLY 201 LD LA rH P IN SY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################