################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:37 2021 # Report_file: c_1408_33.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00273.pdb # 2: usage_00277.pdb # 3: usage_00413.pdb # 4: usage_00568.pdb # 5: usage_00593.pdb # 6: usage_00701.pdb # 7: usage_00705.pdb # 8: usage_00851.pdb # 9: usage_00865.pdb # 10: usage_00948.pdb # 11: usage_01480.pdb # # Length: 85 # Identity: 63/ 85 ( 74.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 85 ( 74.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 85 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00273.pdb 1 DDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 58 usage_00277.pdb 1 --LTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 56 usage_00413.pdb 1 --LTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 56 usage_00568.pdb 1 -DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAG--QPQALQK 57 usage_00593.pdb 1 -DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 57 usage_00701.pdb 1 --LTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 56 usage_00705.pdb 1 DDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 58 usage_00851.pdb 1 -DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAG--QPQALQK 57 usage_00865.pdb 1 DDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 58 usage_00948.pdb 1 -DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQA-LQK- 57 usage_01480.pdb 1 -DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAG--QPQALQK 57 LTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAG Q usage_00273.pdb 59 SGRPVKSIRARLK------------ 71 usage_00277.pdb 57 SGRPVKSIRARLK------------ 69 usage_00413.pdb 57 SGRPVKSIRARLK------------ 69 usage_00568.pdb 58 SGRPVKSIRARLKGKEGRIRGNLMG 82 usage_00593.pdb 58 SGRPVKSIRARLK------------ 70 usage_00701.pdb 57 SGRPVKSIRARLK------------ 69 usage_00705.pdb 59 SGRPVKSIRARLK------------ 71 usage_00851.pdb 58 SGRPVKSIRARLKGKEGRIRGNLMG 82 usage_00865.pdb 59 SGRPVKSIRARLK------------ 71 usage_00948.pdb 58 SGRPVKSIRARLK------------ 70 usage_01480.pdb 58 SGRPVKSIRARLKGKEGRIRGNLMG 82 SGRPVKSIRARLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################