################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:30:35 2021 # Report_file: c_1262_163.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00027.pdb # 2: usage_00050.pdb # 3: usage_00052.pdb # 4: usage_00053.pdb # 5: usage_00127.pdb # 6: usage_00227.pdb # 7: usage_00359.pdb # 8: usage_00360.pdb # 9: usage_00361.pdb # 10: usage_00411.pdb # 11: usage_00661.pdb # 12: usage_00663.pdb # 13: usage_00664.pdb # 14: usage_00665.pdb # 15: usage_00666.pdb # 16: usage_00784.pdb # 17: usage_00785.pdb # 18: usage_00855.pdb # 19: usage_01093.pdb # 20: usage_01101.pdb # 21: usage_01107.pdb # 22: usage_01108.pdb # 23: usage_01325.pdb # 24: usage_01326.pdb # 25: usage_01487.pdb # 26: usage_01694.pdb # 27: usage_01820.pdb # 28: usage_01844.pdb # 29: usage_01882.pdb # 30: usage_01968.pdb # 31: usage_01969.pdb # 32: usage_02070.pdb # # Length: 45 # Identity: 5/ 45 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 45 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 45 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00050.pdb 1 -----DVYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00052.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00053.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00127.pdb 1 -KGHQDFVWVLSRSKVLTGEA-KTAVENYLIGSPVVDSQKLVYS- 42 usage_00227.pdb 1 ----GDLYSVLNRNKNAL---PNKKIKKALNKVS-LVLTKFVVTK 37 usage_00359.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00360.pdb 1 KDR-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_00361.pdb 1 ----GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 37 usage_00411.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00661.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_00663.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00664.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00665.pdb 1 -AA-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 39 usage_00666.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_00784.pdb 1 KDL-GDLYAVLNRNKDTN---AGDKVKGAVTAAS-LKFSDFISTK 40 usage_00785.pdb 1 ----GDLYAVLNRNKDTN---AGDKVKGAVTAAS-LKFSDFISTK 37 usage_00855.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01093.pdb 1 ----GDLYAVLNRNKDTN---AGDKVKGAVTAAS-LKFSDFISTK 37 usage_01101.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01107.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_01108.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01325.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01326.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01487.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_01694.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_01820.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01844.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01882.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_01968.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 usage_01969.pdb 1 KDL-GDLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 40 usage_02070.pdb 1 -----DLYAVLNRNKDAA---AGDKVKSAVSAAT-LEFSKFISTK 36 D y VLnRnK kvk a l f t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################