################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:49 2021 # Report_file: c_1372_35.html ################################################################################################ #==================================== # Aligned_structures: 50 # 1: usage_00057.pdb # 2: usage_00058.pdb # 3: usage_00114.pdb # 4: usage_00130.pdb # 5: usage_00131.pdb # 6: usage_00134.pdb # 7: usage_00145.pdb # 8: usage_00236.pdb # 9: usage_00237.pdb # 10: usage_00274.pdb # 11: usage_00282.pdb # 12: usage_00283.pdb # 13: usage_00284.pdb # 14: usage_00285.pdb # 15: usage_00341.pdb # 16: usage_00342.pdb # 17: usage_00388.pdb # 18: usage_00389.pdb # 19: usage_00390.pdb # 20: usage_00438.pdb # 21: usage_00500.pdb # 22: usage_00501.pdb # 23: usage_00502.pdb # 24: usage_00503.pdb # 25: usage_00523.pdb # 26: usage_00533.pdb # 27: usage_00534.pdb # 28: usage_00554.pdb # 29: usage_00555.pdb # 30: usage_00574.pdb # 31: usage_00575.pdb # 32: usage_00576.pdb # 33: usage_00577.pdb # 34: usage_00615.pdb # 35: usage_00664.pdb # 36: usage_00710.pdb # 37: usage_00895.pdb # 38: usage_00913.pdb # 39: usage_00914.pdb # 40: usage_00917.pdb # 41: usage_00918.pdb # 42: usage_00919.pdb # 43: usage_00920.pdb # 44: usage_01085.pdb # 45: usage_01139.pdb # 46: usage_01166.pdb # 47: usage_01208.pdb # 48: usage_01250.pdb # 49: usage_01274.pdb # 50: usage_01378.pdb # # Length: 143 # Identity: 48/143 ( 33.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/143 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/143 ( 44.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00058.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00114.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVSTATTVGYGDLY 59 usage_00130.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00131.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00134.pdb 1 ---------ATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 51 usage_00145.pdb 1 --QWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00236.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLC 58 usage_00237.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLC 58 usage_00274.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00282.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_00283.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_00284.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_00285.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_00341.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00342.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00388.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00389.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00390.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00438.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATCVGYGDLY 59 usage_00500.pdb 1 --HWRAAGAATVLLVIVLLAGSYLACLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00501.pdb 1 --HWRAAGAATVLLVIVLLAGSYLACLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00502.pdb 1 ---WRAAGAATVLLVIVLLAGSYLACLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 57 usage_00503.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00523.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_00533.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_00534.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00554.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVY-GDLY 58 usage_00555.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVY-GDLY 58 usage_00574.pdb 1 ---WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 57 usage_00575.pdb 1 ---WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 57 usage_00576.pdb 1 ---WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 57 usage_00577.pdb 1 ---WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 57 usage_00615.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVG-GDLY 58 usage_00664.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00710.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_00895.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVATATTVGYGDLY 59 usage_00913.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATGVGYGDLY 58 usage_00914.pdb 1 ---WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVY-GDLY 56 usage_00917.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLY 58 usage_00918.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLY 58 usage_00919.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLY 58 usage_00920.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLY 58 usage_01085.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVQTATTVGYGDLY 59 usage_01139.pdb 1 ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 60 usage_01166.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_01208.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVATATTVGYGDLY 59 usage_01250.pdb 1 -LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 59 usage_01274.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLY 58 usage_01378.pdb 1 --HWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVITATTVGYGDLY 58 ATVLLVIVLLAGSYLA LAERGAPGA LI YP ALWW TAT V GDL usage_00057.pdb 60 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAY 114 usage_00058.pdb 60 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAY 114 usage_00114.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00130.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00131.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00134.pdb 52 PVTL--WGRCVAVVVMVAGITSFGLVTAALATWFVGQ----------------------- 86 usage_00145.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWF----------------------- 90 usage_00236.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00237.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00274.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERR--------------- 99 usage_00282.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVG--------------------- 94 usage_00283.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVG--------------------- 94 usage_00284.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVG--------------------- 94 usage_00285.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVG--------------------- 94 usage_00341.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00342.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERR--------------- 99 usage_00388.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00389.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00390.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00438.pdb 60 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00500.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQ------------------ 95 usage_00501.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFV---------------------- 91 usage_00502.pdb 58 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVG--------------------- 91 usage_00503.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00523.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 101 usage_00533.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00534.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00554.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERR--------------- 98 usage_00555.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 97 usage_00574.pdb 58 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 96 usage_00575.pdb 58 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 96 usage_00576.pdb 58 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 96 usage_00577.pdb 58 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 96 usage_00615.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00664.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00710.pdb 59 PVTLWGRCVAVVVVVAG-----ITSFGLVTAALATWFVGREQERR--------------- 98 usage_00895.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_00913.pdb 59 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 usage_00914.pdb 57 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGREQER---------------- 95 usage_00917.pdb 59 PVTLWGRCVAVVVMVAG-----ITSYGLVFAAVATWFVGR-------------------- 93 usage_00918.pdb 59 PVTLWGRCVAVVVMVAG-----ITSYGLVFAAVATWFVGR-------------------- 93 usage_00919.pdb 59 PVTLWGRCVAVVVMVAG-----ITSYGLVFAAVATWFVGR-------------------- 93 usage_00920.pdb 59 PVTLWGRCVAVVVMVAG-----ITSYGLVFAAVATWFVGR-------------------- 93 usage_01085.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_01139.pdb 61 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 101 usage_01166.pdb 60 PVTLWGRLVAVVVMVAG-----ITSFGLVTAALATWFVGR-------------------- 94 usage_01208.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_01250.pdb 60 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 100 usage_01274.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERR--------------- 98 usage_01378.pdb 59 PVTLWGRCVAVVVMVAG-----ITSFGLVTAALATWFVGREQERRG-------------- 99 PVTL r vaVvV Vag its glv Aa atwf usage_00057.pdb 115 TRTTRALHERFDRLERMLDDNRR 137 usage_00058.pdb 115 TRTTRALHERFDRLERMLDDNRR 137 usage_00114.pdb ----------------------- usage_00130.pdb ----------------------- usage_00131.pdb ----------------------- usage_00134.pdb ----------------------- usage_00145.pdb ----------------------- usage_00236.pdb ----------------------- usage_00237.pdb ----------------------- usage_00274.pdb ----------------------- usage_00282.pdb ----------------------- usage_00283.pdb ----------------------- usage_00284.pdb ----------------------- usage_00285.pdb ----------------------- usage_00341.pdb ----------------------- usage_00342.pdb ----------------------- usage_00388.pdb ----------------------- usage_00389.pdb ----------------------- usage_00390.pdb ----------------------- usage_00438.pdb ----------------------- usage_00500.pdb ----------------------- usage_00501.pdb ----------------------- usage_00502.pdb ----------------------- usage_00503.pdb ----------------------- usage_00523.pdb ----------------------- usage_00533.pdb ----------------------- usage_00534.pdb ----------------------- usage_00554.pdb ----------------------- usage_00555.pdb ----------------------- usage_00574.pdb ----------------------- usage_00575.pdb ----------------------- usage_00576.pdb ----------------------- usage_00577.pdb ----------------------- usage_00615.pdb ----------------------- usage_00664.pdb ----------------------- usage_00710.pdb ----------------------- usage_00895.pdb ----------------------- usage_00913.pdb ----------------------- usage_00914.pdb ----------------------- usage_00917.pdb ----------------------- usage_00918.pdb ----------------------- usage_00919.pdb ----------------------- usage_00920.pdb ----------------------- usage_01085.pdb ----------------------- usage_01139.pdb ----------------------- usage_01166.pdb ----------------------- usage_01208.pdb ----------------------- usage_01250.pdb ----------------------- usage_01274.pdb ----------------------- usage_01378.pdb ----------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################