################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:35:26 2021 # Report_file: c_0820_5.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00057.pdb # 6: usage_00058.pdb # 7: usage_00232.pdb # 8: usage_00305.pdb # 9: usage_00499.pdb # 10: usage_00500.pdb # 11: usage_00501.pdb # 12: usage_00502.pdb # 13: usage_00503.pdb # 14: usage_00504.pdb # 15: usage_00505.pdb # 16: usage_00506.pdb # 17: usage_00507.pdb # 18: usage_00508.pdb # 19: usage_00587.pdb # 20: usage_00606.pdb # 21: usage_00607.pdb # # Length: 75 # Identity: 7/ 75 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 75 ( 14.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 75 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00002.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00013.pdb 1 SMDEIRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLF 60 usage_00014.pdb 1 SMDEIRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLF 60 usage_00057.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00058.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00232.pdb 1 LIDNLKRAIETYASLGLEIQITELDISVFEFEDRRTDLLEPTEEMVELQAKVYEDVFRVF 60 usage_00305.pdb 1 -MKEVDDAIKLYSTVVDHIHLTELDIRIN-----------VSDWERTLQQDQYVQLFKVL 48 usage_00499.pdb 1 SLDEIRAAIERYASLGVVLHITALDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00500.pdb 1 SLDEIRAAIERYASLGVVLHITALDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00501.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00502.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00503.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00504.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00505.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00506.pdb 1 SLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00507.pdb 1 SLDEIRAAIERYASLGVVLHITALDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00508.pdb 1 SLDEIRAAIERYASLGVVLHITALDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 60 usage_00587.pdb 1 -PDNVKLSLEKFISLGVEVSVSELDVTAG---------------LAVGQAYLYAQLFKLY 44 usage_00606.pdb 1 -IKQIREAFNRAAALGVHIQVTELDMSIYSGNS-EQE-KPVTDEMMLEQAYRYRALFDLF 57 usage_00607.pdb 1 -IKQIREAFNRAAALGVHIQVTELDMSIYSGNS-EQE-KPVTDEMMLEQAYRYRALFDLF 57 a l t LD Q Y F usage_00001.pdb 61 KEYR--DVIQSVTFW 73 usage_00002.pdb 61 KEYR--DVIQSVTFW 73 usage_00013.pdb 61 REYR--SNITSVTFW 73 usage_00014.pdb 61 REYR--SNITSVTF- 72 usage_00057.pdb 61 KEYR--DVIQSVTFW 73 usage_00058.pdb 61 KEYR--DVIQSVTFW 73 usage_00232.pdb 61 REYR--DVITSVTLW 73 usage_00305.pdb 49 RKHK--DVIDCVTFW 61 usage_00499.pdb 61 KEYR--DVIQSVTFW 73 usage_00500.pdb 61 KEYR--DVIQSVTFW 73 usage_00501.pdb 61 KEYR--DVIQSVTF- 72 usage_00502.pdb 61 KEYR--DVIQSVTFW 73 usage_00503.pdb 61 KEYR--DVIQSVTFW 73 usage_00504.pdb 61 KEYR--DVIQSVTFW 73 usage_00505.pdb 61 KEYR--DVIQSVTFW 73 usage_00506.pdb 61 KEYR--DVIQSVTFW 73 usage_00507.pdb 61 KEYR--DVIQSVTF- 72 usage_00508.pdb 61 KEYR--DVIQSVTFW 73 usage_00587.pdb 45 KEHA--DHIARVTFW 57 usage_00606.pdb 58 KEFDDRGVMDSVTLW 72 usage_00607.pdb 58 KEFDDRGVMDSVTLW 72 e VT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################