################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:02:15 2021 # Report_file: c_0121_12.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00021.pdb # 2: usage_00058.pdb # 3: usage_00074.pdb # 4: usage_00088.pdb # 5: usage_00129.pdb # 6: usage_00165.pdb # 7: usage_00177.pdb # 8: usage_00229.pdb # 9: usage_00230.pdb # 10: usage_00238.pdb # 11: usage_00244.pdb # 12: usage_00245.pdb # 13: usage_00363.pdb # 14: usage_00364.pdb # 15: usage_00365.pdb # 16: usage_00400.pdb # 17: usage_00457.pdb # 18: usage_00459.pdb # 19: usage_00460.pdb # 20: usage_00464.pdb # 21: usage_00468.pdb # 22: usage_00510.pdb # 23: usage_00512.pdb # 24: usage_00521.pdb # # Length: 136 # Identity: 25/136 ( 18.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/136 ( 31.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/136 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 EVQLQESGPGLVKPSQSLSLTCTVT-GYSITS-DYAWNWIRQFPGNKLEWMGYISY--SG 56 usage_00058.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVT-GYSITS-GYAWNWIRQFPGNKLEWMGYIRY--SG 55 usage_00074.pdb 1 EVQLQESGPSLVKPSQTLSLTCSVT-GDSIT--SGYWNWIRKFPGNKLEYMGYISY--SG 55 usage_00088.pdb 1 --QLQESGPGLVKPSQTLSLSCTVSG-------AHYWSWIRQYPGKGLEWIGYIHY--SG 49 usage_00129.pdb 1 --QLQESGPGLVKPSQSLSLTCTVT-GYSITS-DYAWNWIRQFPGNKLEWMGYITY--SG 54 usage_00165.pdb 1 DVQLQESGPGLVKPSQSLSLTCTVT-GYSITS-GYAWNWIRQFPGNKLEWMGYIRY--SG 56 usage_00177.pdb 1 -VQLQESGPGLVRPSQSLSLTCTVT-GYSLTS-DFAWNWIRQFPGNKLEWMGYINY--SG 55 usage_00229.pdb 1 --QLQESGPGLVKPSETLSLTCTVS-GGSISSSSYYWGWIRQPPGKGLEWIGSVYY--SG 55 usage_00230.pdb 1 QLQLQESGPGLVKPSETLSLTCTVS-GGSISSSSYYWGWIRQPPGKGLEWIGSVYY--SG 57 usage_00238.pdb 1 QVQLQESGPGLVKPSQTLSLTCTVS-GGSISSGDYFWSWIRQLPGKGLEWIGHIHN--SG 57 usage_00244.pdb 1 QVALQESGPGLVKPSQSLSLTCTVT-GYSITS-DYAWNWIRQFPGNKLEWMGYIRN--GG 56 usage_00245.pdb 1 QVTLSQSGPGLVKPSQSLSLTCTVT-SYSITS-DYAWNWIRQFAGQSLEWMGYISY--SG 56 usage_00363.pdb 1 QVQLQQWGAGLLKPSETLSLTCGVY-GESL---GHYWSWVRQPPGKRLEWIGEIKH--NG 54 usage_00364.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVS-GYSITG-GYSWHWIRQPPGKGLEWMGYIHY--SG 56 usage_00365.pdb 1 QVQLQESGPGLVKPSDTLSLTCAVS-GYPIRF-GYSWHWIRQPPGKGLEWMGYIHY--SG 56 usage_00400.pdb 1 --QLQQSGPGLVKPSQTLSLTCAIS-GDSVSSNSAAWGWIRQSPGRGLEWLGIIQKRSKW 57 usage_00457.pdb 1 -QLLEQSGPSLVKPSQTLSLTCSVT-GDSIT--SGYWNWIRKFPGNKLEYMGYISY--SG 54 usage_00459.pdb 1 -VQLQESGPSLVKPSQTLSLTCSVT-GDSIT--SGYWNWIRKFPGNKLEYMGYISY--SG 54 usage_00460.pdb 1 -VQLQESGPSLVKPSQTLSLTCSVT-GDSIT----YWNWIRKFPGNKLEYMGYISY--SG 52 usage_00464.pdb 1 EVQLQESGPSLVKPSQTLSLTCSVT-GDSVT--SGYWSWIRQFPGNKLDYMGYISY--RG 55 usage_00468.pdb 1 --QLQESGPGLVKPSETLSLTCVVS-GGSISS-SNWWSWVRQPPGKGLEWIGEIYH--SG 54 usage_00510.pdb 1 -VQLQESGPDLVKPSSSLKLTCTTT-GYSISS-GYSWHWIRQEPGKSLEWMGYIHY--SG 55 usage_00512.pdb 1 ---LQESGPDLVKPSQSLSLTCTVT-GYSITS-GYTWHWIRQFPGNKQEWMGYIHF--SG 53 usage_00521.pdb 1 --QLLESGPDLVKPSQSLSLTCTVT-GYSITS-GYNWHWIRQFPGNKLEWMGYIHY--RG 54 L sGp LvkPS LsLtC W W R pG le G g usage_00021.pdb 57 TTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCGRTG---VY-RY--P---E- 106 usage_00058.pdb 56 DTRYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAIGY---G------------ 100 usage_00074.pdb 56 STYYNPSLKSRLSITRDTSRNQYYLQLKSVTPEDTATYYCASPPGYYGS-----G--PY- 107 usage_00088.pdb 50 NTYYNPSLKSRITISQHTSENQFSLKLNSVTVADTAVYYCARGT---RL-----RTL-RN 100 usage_00129.pdb 55 STGYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCASYD---D------------ 99 usage_00165.pdb 57 DTRYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAIGY---G------------ 101 usage_00177.pdb 56 YTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAREA---YY-GR--A---Y- 105 usage_00229.pdb 56 GASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIY---GSGTFYYY---F- 108 usage_00230.pdb 58 GASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIY---GSGTFYYY---F- 110 usage_00238.pdb 58 TTYYNPSLKSRVTISVDTSKKQFSLRLSSVTAADTAVYYCARDR---GG-DY--Y---Y- 107 usage_00244.pdb 57 STTYNPSLASRISITRDTSKNQFFLQLNSVTTEDTATYYCARGG---T------------ 101 usage_00245.pdb 57 STSYNPSLKSRISITRDTSKNQFFLQLNSVTTDDTATYYCARGG---T------------ 101 usage_00363.pdb 55 SPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRS---NW-----P---YL 103 usage_00364.pdb 57 YTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKD---P------------ 101 usage_00365.pdb 57 YTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKD---S------------ 101 usage_00400.pdb 58 YNNYAVKVKSKITINPDTSKNQFSLQLSSVTPEDTAVYYCARYS---YP-----F---Y- 105 usage_00457.pdb 55 STYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALIT---TT-----T---Y- 102 usage_00459.pdb 55 STYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALIT---TT-----T---Y- 102 usage_00460.pdb 53 STYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALIT---TT-----T---Y- 100 usage_00464.pdb 56 STYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCTYFD---SD-----D---Y- 103 usage_00468.pdb 55 SPNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARQ----------------- 97 usage_00510.pdb 56 STDYNDSLKARITITRDTASNMFFLQLSSVTSDDTAVYYCVIYR---YD-----G---QW 104 usage_00512.pdb 54 YTNYNPSLKSRVSITRDTSKNQFFLHLNSVTTEDTATYYCARGD---YG-----Y---E- 101 usage_00521.pdb 55 TTNYNTSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCACDD---F------------ 99 sl r I d s nq L L SV DTA YyC usage_00021.pdb 107 RA--PYWGQGTLVTVS 120 usage_00058.pdb 101 NS--DYWGQGTLVTVS 114 usage_00074.pdb 108 AM--DYWGQGTSVTVS 121 usage_00088.pdb 101 AF--DIWGQGTMVTVS 114 usage_00129.pdb 100 YTWFTYWGQGTLVTVS 115 usage_00165.pdb 102 NS--DYWGQGTLVTVS 115 usage_00177.pdb 106 WF--AYWG-------- 111 usage_00229.pdb 109 YM--DVWGKGSTVTVS 122 usage_00230.pdb 111 YM--DVWGKGSTVTVS 124 usage_00238.pdb 108 GM--DVWGQGTTVTVS 121 usage_00244.pdb 102 GF--TYWGAGTLVTV- 114 usage_00245.pdb 102 GF--PYWGTGTNVTVS 115 usage_00363.pdb 104 PF--DPWGQGTLVTV- 116 usage_00364.pdb 102 SDAFPYWGQGTLVTV- 116 usage_00365.pdb 102 GNYFPYWGQGTLVTV- 116 usage_00400.pdb 106 SI--DYWGQGTLVT-- 117 usage_00457.pdb 103 AM--DYWGQGTTVTV- 115 usage_00459.pdb 103 AM--DYWGQGTSVTVS 116 usage_00460.pdb 101 AM--DYWGQGTSVTV- 113 usage_00464.pdb 104 AM--EYWGQGTSVTVS 117 usage_00468.pdb 98 -M--RQWGQGTLVTV- 109 usage_00510.pdb 105 VF--DDWGAGTTVTVS 118 usage_00512.pdb 102 WF--TYWGQGTLVTVS 115 usage_00521.pdb 100 YS--DYWGQGTIVTVS 113 WG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################