################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:20 2021 # Report_file: c_0110_19.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00016.pdb # 2: usage_00066.pdb # 3: usage_00068.pdb # 4: usage_00074.pdb # 5: usage_00078.pdb # 6: usage_00081.pdb # 7: usage_00082.pdb # 8: usage_00106.pdb # 9: usage_00107.pdb # 10: usage_00109.pdb # 11: usage_00113.pdb # 12: usage_00121.pdb # 13: usage_00122.pdb # 14: usage_00123.pdb # 15: usage_00140.pdb # 16: usage_00157.pdb # 17: usage_00165.pdb # 18: usage_00193.pdb # # Length: 254 # Identity: 123/254 ( 48.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/254 ( 48.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 91/254 ( 35.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 --RHFAQLLSKMESSLI-PAAVFM--------LPQSARCREARAELQKILGEIIVAREKE 49 usage_00066.pdb 1 -ARHFAQLLSKMESSLI-PAAVFM-PWLLRL-LPQSARCREARAELQKILGEIIVAREKE 56 usage_00068.pdb 1 -ARHFAQLLSKMESSLI-PAAVFM-PWLLR--LPQSARCREARAELQKILGEIIVAREKE 55 usage_00074.pdb 1 NARHFAQLLSKMESSLIPALL--------RLPLPQSARCREARAELQKILGEIIVAREK- 51 usage_00078.pdb 1 -ARHFAQLLSKMESSLI-PAAVFMP-----LPLPQSARCREARAELQKILGEIIVAREKE 53 usage_00081.pdb 1 DARQFAQLLAKMESCLI-PAAVFL-PWILKLPLPQSYRCRDARAELQDILSEIIIAREKE 58 usage_00082.pdb 1 ----------------I-PAAVFL-PWILKLPLPQSYRCRDARAELQDILSEIIIAREKE 42 usage_00106.pdb 1 ----------------I-PAAVFL-PILLKLPLPQSARCHEARTELQKILSEIIIARKAA 42 usage_00107.pdb 1 ----------------I-PAAVFL-PILLKLPLPQSARCHEARTELQKILSEIIIARKAA 42 usage_00109.pdb 1 -----------------------M-PWLLRLPLPQSARCREARAELQKILGEIIVAREKE 36 usage_00113.pdb 1 -ARHFAQLLSKMESSLI-PAAVFM-PWLLRLPLPQSARCREARAELQKILGEIIVAREKE 57 usage_00121.pdb 1 -----------------------M-PWLLRLPLPQSARCREARAELQKILGEIIVAREKE 36 usage_00122.pdb 1 -----------------------M-PWLLRLPLPQSARCREARAELQKILGEIIVAREKE 36 usage_00123.pdb 1 -----------------------M-PWLLRLPLPQSARCREARAELQKILGEIIVAREKE 36 usage_00140.pdb 1 DARRFAQLLAKMESSLI-PAAVFL-PILLKLPLPQSARCHEARTELQKILSEIIIARKEE 58 usage_00157.pdb 1 -------------------------PWLLRLPLPQSARCREARAELQKILGEIIVAREK- 34 usage_00165.pdb 1 ----------------I-PAAVFL-PILLKLPLPQSARCHEARTELQKILSEIIIARKEE 42 usage_00193.pdb 1 NARHFAQLLSKMESSLI-PAAVFM--------LPQSARCREARAELQKILGEIIVAREKE 51 LPQS RC AR ELQ IL EII AR usage_00016.pdb 50 --------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 101 usage_00066.pdb 57 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 116 usage_00068.pdb 56 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 115 usage_00074.pdb 52 --------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 103 usage_00078.pdb 54 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 113 usage_00081.pdb 59 EAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDP 118 usage_00082.pdb 43 EA----NTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDP 98 usage_00106.pdb 43 AVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 102 usage_00107.pdb 43 ------STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 96 usage_00109.pdb 37 E--------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 88 usage_00113.pdb 58 E------TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 111 usage_00121.pdb 37 E------TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 90 usage_00122.pdb 37 E------TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 90 usage_00123.pdb 37 -------TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 89 usage_00140.pdb 59 EV----STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 114 usage_00157.pdb 35 --------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 86 usage_00165.pdb 43 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 102 usage_00193.pdb 52 --------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHP 103 DLL GLL AVYRDGT MS HEVCGMIVAAMFAGQHTS ITT WS LHLM P usage_00016.pdb 102 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 161 usage_00066.pdb 117 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 176 usage_00068.pdb 116 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 175 usage_00074.pdb 104 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 163 usage_00078.pdb 114 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 173 usage_00081.pdb 119 RNKRHLAKLHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVG 178 usage_00082.pdb 99 RNKRHLAKLHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVG 158 usage_00106.pdb 103 ANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVG 162 usage_00107.pdb 97 ANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVG 156 usage_00109.pdb 89 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 148 usage_00113.pdb 112 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 171 usage_00121.pdb 91 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 150 usage_00122.pdb 91 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 150 usage_00123.pdb 90 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 149 usage_00140.pdb 115 ANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVG 174 usage_00157.pdb 87 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 146 usage_00165.pdb 103 ANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVG 162 usage_00193.pdb 104 KNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVG 163 N L L EI EFPAQLNY NVM EMPFAE C RESIRRDPPL M MR V V VG usage_00016.pdb 162 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFI----------------- 204 usage_00066.pdb 177 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 201 usage_00068.pdb 176 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFI----------------- 218 usage_00074.pdb 164 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 188 usage_00078.pdb 174 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGF-GAGVHKCIGQKFAL 232 usage_00081.pdb 179 KYVVPEGDIIACSPLLSHQDEEAFP----------------------------------- 203 usage_00082.pdb 159 KYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDGAFCGF-------------- 204 usage_00106.pdb 163 SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGF--------------- 207 usage_00107.pdb 157 SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGF--------------- 201 usage_00109.pdb 149 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 173 usage_00113.pdb 172 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGF--------------- 216 usage_00121.pdb 151 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 175 usage_00122.pdb 151 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 175 usage_00123.pdb 150 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 174 usage_00140.pdb 175 SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGF-GAGVHKCIGQKFGL 233 usage_00157.pdb 147 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGF--------------- 191 usage_00165.pdb 163 SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGF--------------- 207 usage_00193.pdb 164 SYVVPKGDIIACSPLLSHHDEEAFP----------------------------------- 188 YVVP GDIIACSPLLSH DEEAFP usage_00016.pdb -------------- usage_00066.pdb -------------- usage_00068.pdb -------------- usage_00074.pdb -------------- usage_00078.pdb 233 LQVKTILATAFREY 246 usage_00081.pdb -------------- usage_00082.pdb -------------- usage_00106.pdb -------------- usage_00107.pdb -------------- usage_00109.pdb -------------- usage_00113.pdb -------------- usage_00121.pdb -------------- usage_00122.pdb -------------- usage_00123.pdb -------------- usage_00140.pdb 234 LQVKTILATAFRS- 246 usage_00157.pdb -------------- usage_00165.pdb -------------- usage_00193.pdb -------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################