################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:43 2021 # Report_file: c_0130_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00023.pdb # 4: usage_00024.pdb # 5: usage_00025.pdb # 6: usage_00026.pdb # 7: usage_00139.pdb # 8: usage_00140.pdb # 9: usage_00141.pdb # 10: usage_00142.pdb # 11: usage_00143.pdb # # Length: 156 # Identity: 35/156 ( 22.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/156 ( 22.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/156 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 MQTLLALNWKMNKTPTEARSWAEELTTKYAPA--EGVDLAVLAPALDLSALAANL----P 54 usage_00022.pdb 1 MQTLLALNWKMNKTPTEARSWAEELTTKYAPA--EGVDLAVLAPALDLSALAANL----P 54 usage_00023.pdb 1 --KFVAGNWKMNTTLAEAKALGAAVAKGVTD---DRVTVAVFPPYPWLTAVGEVLK--G- 52 usage_00024.pdb 1 --KFVAGNWKMNTTLAEAKALGAAVAKGVTD---DRVTVAVFPPYPWLTAVGEVLK--G- 52 usage_00025.pdb 1 --PLMAGNWKMNLNHLEAIAHVQKLAFALADKDYDAVEVAVLAPFTDLRSVQTLVDGDK- 57 usage_00026.pdb 1 --PLMAGNWKMNLNHLEAIAHVQKLAFALADKDYDAVEVAVLAPFTDLRSVQTLVDGDK- 57 usage_00139.pdb 1 --PFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAK--G- 53 usage_00140.pdb 1 --PFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAK--G- 53 usage_00141.pdb 1 --PFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAK--G- 53 usage_00142.pdb 1 --PFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAK--G- 53 usage_00143.pdb 1 --PFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAK--G- 53 A NWKMN EA V P L usage_00021.pdb 55 AGIAFGGQDVSAHESGAYTGEISAAMLKDAGASCVVVGHSERREYHDESDATVAAKARQA 114 usage_00022.pdb 55 AGIAFGGQDVSAHESGAYTGEISAAMLKDAGASCVVVGHSERREYHDESDATVAAKARQA 114 usage_00023.pdb 53 SPVALGAQDVSSEKKGAFTGEVSPAMLLETGCKYALIGHSERRHIIGESETFINHKVHTA 112 usage_00024.pdb 53 SPVALGAQDVSSEKKGAFTGEVSPAMLLETGCKYALIGHSERRHIIGESETFINHKVHTA 112 usage_00025.pdb 58 LKIKYGAQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERRQYHAETDEIVNAKVKAA 117 usage_00026.pdb 58 LKIKYGAQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERRQYHAETDEIVNAKVKAA 117 usage_00139.pdb 54 SNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAI 113 usage_00140.pdb 54 SNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAI 113 usage_00141.pdb 54 SNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAI 113 usage_00142.pdb 54 SNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAI 113 usage_00143.pdb 54 SNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAI 113 Q GA TGE S L GHSERR E K usage_00021.pdb 115 QANGLLPIVCVGENLDVRERGEHVPQTLAQLRGSLE 150 usage_00022.pdb 115 QANGLLPIVCVGENLDVRERGEHVPQTLAQLRGSLE 150 usage_00023.pdb 113 LEEGLSVVLCMGETLAERERGLQERVFQRQVYAACA 148 usage_00024.pdb 113 LEEGLSVVLCMGETLAERERGLQERVFQRQVYAACA 148 usage_00025.pdb 118 YKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGLK 153 usage_00026.pdb 118 YKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGL- 152 usage_00139.pdb 114 FANGMLPIICCGESLETYEAGKAAEFVGAQVSAAL- 148 usage_00140.pdb 114 FANGMLPIICCGESLETYEAGKAAEFVGAQVSAALA 149 usage_00141.pdb 114 FANGMLPIICCGESLETYEAGKAAEFVGAQVSAALA 149 usage_00142.pdb 114 FANGMLPIICCGESLETYEAGKAAEFVGAQVSAALA 149 usage_00143.pdb 114 FANGMLPIICCGESLETYEAGKAAEFVGAQVSAALA 149 G C GE L E G Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################