################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:51 2021 # Report_file: c_1180_146.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00044.pdb # 2: usage_00499.pdb # 3: usage_00861.pdb # 4: usage_01229.pdb # 5: usage_01728.pdb # 6: usage_01750.pdb # 7: usage_01751.pdb # 8: usage_01797.pdb # # Length: 84 # Identity: 0/ 84 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 84 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 72/ 84 ( 85.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 -----------------------------HVKPL--LQ-K-------RPKPDEKY----- 16 usage_00499.pdb 1 ----D-AVIKAY-K-DNSDEESYATVYIK---D---PKLTIE-----------N------ 30 usage_00861.pdb 1 ----GYEIVLYI-S-------MSDSDK----VGV--FYVEN-PA---------------- 25 usage_01229.pdb 1 VTLNC-SDAKVNINR-----------------EEIKNCSFNA-----------T-TELRD 30 usage_01728.pdb 1 -------HFVVF-E-SEENSESVMDGFVE---HP--FYTATL-----------N------ 29 usage_01750.pdb 1 -GIYT-IPFVAK-K-ANDDSNSSMQNYFN---NP--AWLKVK-----------N------ 34 usage_01751.pdb 1 ---YT-IPFVAK-K-ANDDSNSSMQNYFN---NP--AWLKVK-----------N------ 32 usage_01797.pdb 1 -----------------------------YTTFN--IRPIS---PENKIDLNNE------ 20 usage_00044.pdb 17 -YSSSIWGP-T--CDGLDRIV--- 33 usage_00499.pdb 31 -GKRIITAT-L----------KD- 41 usage_00861.pdb 26 -AGQRYIHIL-------------- 34 usage_01229.pdb 31 KKKKEYALF--Y------------ 40 usage_01728.pdb 30 -GQKYVVMK-TKD----------- 40 usage_01750.pdb 35 -GKKMVAMT--------------- 42 usage_01751.pdb 33 -GKKMVAMT--------------- 40 usage_01797.pdb 21 -QENISFYY-E--NLPEPFIST-T 39 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################