################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:43 2021 # Report_file: c_0513_31.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00405.pdb # 2: usage_00406.pdb # 3: usage_00408.pdb # 4: usage_00418.pdb # 5: usage_00419.pdb # 6: usage_00420.pdb # 7: usage_00421.pdb # 8: usage_00423.pdb # 9: usage_00433.pdb # 10: usage_00434.pdb # # Length: 97 # Identity: 74/ 97 ( 76.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 97 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 97 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00405.pdb 1 --------YLPVGLKHVLCTDISRD--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00406.pdb 1 SLEQLVETYLPVGLKHVLCTDISRD--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 58 usage_00408.pdb 1 --------YLPVGLKHVLCTDISRD--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00418.pdb 1 --------YLPVGLKHVLCTDISRA--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00419.pdb 1 --------YLPVGLKHVLCTDISRD--GTLAGSDVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00420.pdb 1 --------YLPVGLKHVLCTDISRD--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00421.pdb 1 --------YLPVGLKHVLCTDISRD--GTLAGSNVSLYEEVCARYPQIAFQSSGGIGDID 50 usage_00423.pdb 1 --------YLPVGLKHVLCTDISRD--GT----LVSLYEEVCARYPQIAFQSSGGIGDID 46 usage_00433.pdb 1 --------YLPVGLKHVLCTDIS----------NVSLYEEVCARYPQIAFQSSGGIGDID 42 usage_00434.pdb 1 --------YLPVGLKHVLCTDIR--DGAG----SVSLYEEVCARYPQIAFQSSGGIGDID 46 YLPVGLKHVLCTDIs VSLYEEVCARYPQIAFQSSGGIGDID usage_00405.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 85 usage_00406.pdb 59 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 93 usage_00408.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 85 usage_00418.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQNVK 87 usage_00419.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 85 usage_00420.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQ--- 84 usage_00421.pdb 51 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 85 usage_00423.pdb 47 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 81 usage_00433.pdb 43 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 77 usage_00434.pdb 47 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQN-- 81 DIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################