################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:55:54 2021 # Report_file: c_0077_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00134.pdb # 2: usage_00135.pdb # 3: usage_00136.pdb # 4: usage_00148.pdb # 5: usage_00164.pdb # 6: usage_00165.pdb # 7: usage_00166.pdb # 8: usage_00167.pdb # 9: usage_00168.pdb # 10: usage_00169.pdb # 11: usage_00175.pdb # 12: usage_00176.pdb # 13: usage_00177.pdb # # Length: 224 # Identity: 156/224 ( 69.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 156/224 ( 69.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/224 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00135.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00136.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00148.pdb 1 TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRL 60 usage_00164.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00165.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00166.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00167.pdb 1 -------------EELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 47 usage_00168.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00169.pdb 1 TVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRL 60 usage_00175.pdb 1 TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRL 60 usage_00176.pdb 1 TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRL 60 usage_00177.pdb 1 TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRL 60 EELT ASSILLDPEYGLPAS R GLLLAYEKTGYD RL usage_00134.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00135.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00136.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00148.pdb 61 PDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEV 120 usage_00164.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00165.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00166.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00167.pdb 48 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 107 usage_00168.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00169.pdb 61 PDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEI 120 usage_00175.pdb 61 PDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEV 120 usage_00176.pdb 61 PDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEV 120 usage_00177.pdb 61 PDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEV 120 PDCL WSAKR KE GA AVKFLLYYD D N QKKAYIERIGSEC AEDIPF LE usage_00134.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEA-KVFSKERFGVDVLKVEVPVN-KFVEGFADGEVL 178 usage_00135.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEA-KVFSKERFGVDVLKVEVPVN-KFVEGFADGEVL 178 usage_00136.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEA-KVFSKERFGVDVLKVEVPVN-KFVEGFADGEVL 178 usage_00148.pdb 121 LTYDDNIPDNGSVEFAKVKPRKVNEA-KLFSEPRFNVDVLKVEVPVN-KYVEGFAEGEVV 178 usage_00164.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 180 usage_00165.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 180 usage_00166.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 180 usage_00167.pdb 108 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 167 usage_00168.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 180 usage_00169.pdb 121 LTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVL 180 usage_00175.pdb 121 LTYDDNIPDNGSVEFAKVKPRKVNEA-KLFSEPRFNVDVLKVEVPVN-KYVEGFAEGEVV 178 usage_00176.pdb 121 LTYDDNIPDNGSVEFAKVKPRKVNEA-KLFSEPRFNVDVLKVEVPVN-KYVEGFAEGEVV 178 usage_00177.pdb 121 LTYDDNIPDNGSVEFAKVKPRKVNEA-KLFSEPRFNVDVLKVEVPVN-KYVEGFAEGEVV 178 LTYD I DN S EFAKVK KVNEA K FS RF VDVLKVEVPVN K VEGFA GEV usage_00134.pdb 179 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 222 usage_00135.pdb 179 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 222 usage_00136.pdb 179 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 222 usage_00148.pdb 179 YTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAG 222 usage_00164.pdb 181 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 224 usage_00165.pdb 181 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 224 usage_00166.pdb 181 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 224 usage_00167.pdb 168 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 211 usage_00168.pdb 181 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 224 usage_00169.pdb 181 FTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESG 224 usage_00175.pdb 179 YTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAG 222 usage_00176.pdb 179 YTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAG 222 usage_00177.pdb 179 YTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAG 222 TKEEAAQ F DQ A T LPYIYLSAGVSA LFQ TL FA E G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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