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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:57:13 2021
# Report_file: c_0895_30.html
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#====================================
# Aligned_structures: 8
#   1: usage_00003.pdb
#   2: usage_00004.pdb
#   3: usage_00067.pdb
#   4: usage_00131.pdb
#   5: usage_00132.pdb
#   6: usage_00146.pdb
#   7: usage_00178.pdb
#   8: usage_00188.pdb
#
# Length:         64
# Identity:       13/ 64 ( 20.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/ 64 ( 82.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 64 ( 17.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00003.pdb         1  ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   53
usage_00004.pdb         1  ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   53
usage_00067.pdb         1  ---TPEDVKTWLQSKGFNPVTVNSLGV--LNGAQLFSLNKDELRTVCPEGARVYSQITVQ   55
usage_00131.pdb         1  --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   54
usage_00132.pdb         1  --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   54
usage_00146.pdb         1  --GPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   54
usage_00178.pdb         1  NPGPQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   56
usage_00188.pdb         1  ---PQDFLLKMP---GVNAKNCRSLMHHVKNIAELAALSQDELTSILGN-AANAKQLYDF   53
                              pqdfllkmp   GvNakncrSLmh  kNiAeLaaLsqDELtsilgn AanakQlydf

usage_00003.pdb        54  IH--   55
usage_00004.pdb        54  IH--   55
usage_00067.pdb        56  KAAL   59
usage_00131.pdb        55  IH--   56
usage_00132.pdb        55  IHT-   57
usage_00146.pdb        55  IH--   56
usage_00178.pdb        57  IHT-   59
usage_00188.pdb        54  IH--   55
                           ih  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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