################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:10 2021 # Report_file: c_0685_104.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00609.pdb # 2: usage_00610.pdb # 3: usage_01217.pdb # 4: usage_01294.pdb # # Length: 76 # Identity: 2/ 76 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 76 ( 39.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 76 ( 60.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00609.pdb 1 GFSLSNNSLLVPTSGIYFVYSQVVFS-----------PLYLAHEVQ-LFSSQYPFHVPL- 47 usage_00610.pdb 1 GFSLSNNSLLVPTSGIYFVYSQVVFS-----------PLYLAHEVQ-LFSSQYPFHVPL- 47 usage_01217.pdb 1 GFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQ-LFSSQYPFHV--- 56 usage_01294.pdb 1 QITDLAIRSTSP---------L-HH--------------SDNEYTLENSKAFR--YVYIT 34 gfslsnnsllvP q vf ylahevq lfssqy hV usage_00609.pdb ---------------- usage_00610.pdb ---------------- usage_01217.pdb 57 ------PLL------- 59 usage_01294.pdb 35 HEPEVQIGEVSQYEYL 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################