################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:09 2021 # Report_file: c_1434_115.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00231.pdb # 2: usage_00233.pdb # 3: usage_00951.pdb # 4: usage_00953.pdb # 5: usage_00958.pdb # 6: usage_00960.pdb # 7: usage_01296.pdb # 8: usage_01298.pdb # 9: usage_02556.pdb # # Length: 94 # Identity: 6/ 94 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 94 ( 57.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 94 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_00233.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_00951.pdb 1 -ETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 45 usage_00953.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_00958.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_00960.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_01296.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_01298.pdb 1 PETAALQDALIYVTKGLGQIATRLRAEGKAVD---HRIDRLVTGNLFAT----------- 46 usage_02556.pdb 1 ------------------KPTALAQKIE-EYSQQLEGLTNDVHTLEAYGVDSLKTRYPDL 41 qiatrlraeg avd hridrlVtgnlfat usage_00231.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_00233.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_00951.pdb 46 -ITNA----NFDDDILAERVRMTCAAKKELAASL 74 usage_00953.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_00958.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_00960.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_01296.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_01298.pdb 47 -ITNA----NFDDDILAERVRMTCAAKKELAASL 75 usage_02556.pdb 42 LPFPQIPNDRF-TSEVAR-VECTACIIIKLENFQ 73 itna nF ddilAe VrmTcaakkeLaasl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################