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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:28:53 2021
# Report_file: c_0590_20.html
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#====================================
# Aligned_structures: 6
#   1: usage_00199.pdb
#   2: usage_00270.pdb
#   3: usage_00273.pdb
#   4: usage_00274.pdb
#   5: usage_00335.pdb
#   6: usage_00345.pdb
#
# Length:        124
# Identity:       13/124 ( 10.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     25/124 ( 20.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           47/124 ( 37.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00199.pdb         1  DAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLL   60
usage_00270.pdb         1  DGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMV-DDEELLELVEMEVRELL   59
usage_00273.pdb         1  DIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINK-IDLPQA---DPEKVKRQLMERG   56
usage_00274.pdb         1  DIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINK-IDLPQA---DPEKVKRQLMERG   56
usage_00335.pdb         1  DIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINK-IDLPQA---DPEKVKRQLMERG   56
usage_00345.pdb         1  DLALIVVDAKEGPKTQTGEHMLILDHFNIP-IIVVITKSDNA--GTEEIKRTEMIMKSIL   57
                           D A  V aA dG mpQT E        g   I       D         e v        

usage_00199.pdb        61  KTLG-Y------KDFPVIPTSAWNG------DN---VVKKSDKMPWYNGPTLIEALDQI-  103
usage_00270.pdb        60  SQYD-FPG----DDTPIVRGSALKALEGDAEW-EAKIL------------ELAGFLDS--   99
usage_00273.pdb        57  -----FVPEEYGGDAIVIPISAKTG------QG---VQ------------DLLEMILLLA   90
usage_00274.pdb        57  -----FVPEEYGGDAIVIPISAKTG------QG---VQ------------DLLEMILLLA   90
usage_00335.pdb        57  -----FVPEEYGGDAIVIPISAKTG------QG---VQ------------DLLEMILLLA   90
usage_00345.pdb        58  QSTHN--L----KNSSIIPISAKTG------FG---VD------------ELKNLIITTL   90
                                        d   ip SA  g           v              L        

usage_00199.pdb            ----     
usage_00270.pdb            ----     
usage_00273.pdb        91  ELED   94
usage_00274.pdb        91  ELED   94
usage_00335.pdb        91  ELED   94
usage_00345.pdb        91  NNA-   93
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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