################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:54 2021 # Report_file: c_1172_518.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01169.pdb # 2: usage_03622.pdb # 3: usage_03888.pdb # 4: usage_04024.pdb # # Length: 73 # Identity: 0/ 73 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 73 ( 1.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 73 ( 78.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01169.pdb 1 ---------------------LVAIMTL---KD--ELVALGKA---MMTSQEML-EKTK- 29 usage_03622.pdb 1 APSAIVRVRSSHIIDHVLSEARTYTCVGRT--GSKTIYASTVVH---------------- 42 usage_03888.pdb 1 ---------------------FSLAATYR-GAI-VGMIVAEIKNRTKIHKEDG-DILASN 36 usage_04024.pdb 1 --------------------FFSLAATYR-GAI-VGMIVAEIKNRTKIHKEDG-DIL--- 34 t usage_01169.pdb 30 GIAVDVEK--VFM 40 usage_03622.pdb ------------- usage_03888.pdb 37 FSVDTQVAYI--- 46 usage_04024.pdb 35 -SVDTQVA----- 41 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################