################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:34 2021 # Report_file: c_0825_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00079.pdb # 2: usage_00169.pdb # 3: usage_00170.pdb # 4: usage_00171.pdb # 5: usage_00172.pdb # 6: usage_00209.pdb # 7: usage_00218.pdb # 8: usage_00219.pdb # 9: usage_00258.pdb # 10: usage_00259.pdb # 11: usage_00260.pdb # 12: usage_00271.pdb # # Length: 60 # Identity: 56/ 60 ( 93.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 60 ( 93.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 60 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 --RLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 57 usage_00169.pdb 1 DPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 59 usage_00170.pdb 1 DPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLI 60 usage_00171.pdb 1 DPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 59 usage_00172.pdb 1 -PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHW-- 57 usage_00209.pdb 1 -PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLI 59 usage_00218.pdb 1 -PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 58 usage_00219.pdb 1 --RLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 57 usage_00258.pdb 1 -PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 58 usage_00259.pdb 1 --RLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL- 57 usage_00260.pdb 1 -PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLI 59 usage_00271.pdb 1 DPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHW-- 58 RLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################