################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:57 2021 # Report_file: c_1261_197.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_02459.pdb # 2: usage_03344.pdb # 3: usage_03345.pdb # 4: usage_03346.pdb # 5: usage_03347.pdb # 6: usage_03348.pdb # 7: usage_03349.pdb # 8: usage_03350.pdb # 9: usage_03351.pdb # # Length: 35 # Identity: 6/ 35 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 35 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 35 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02459.pdb 1 ESYVIYPTD-EREVFLAAYNRRREGRE-GNVWIA- 32 usage_03344.pdb 1 -NYVIIG--GDAAGS-A-AQIVRNDENANVVTLE- 29 usage_03345.pdb 1 -NYVIIG--GDAAGS-A-AQIVRNDENANVVTLE- 29 usage_03346.pdb 1 MNYVIIG--GDAAGMSAAMQIVRNDENANVVTLEK 33 usage_03347.pdb 1 MNYVIIG--GDAAGMSAAMQIVRNDENANVVTLEK 33 usage_03348.pdb 1 -NYVIIG--GDAAGMSAAMQIVRNDENANVVTLE- 31 usage_03349.pdb 1 MNYVIIG--GDAAGMSAAMQIVRNDENANVVTLE- 32 usage_03350.pdb 1 MNYVIIG--GDAAGMSAAMQIVRNDENANVVTLE- 32 usage_03351.pdb 1 MNYVIIG--GDAAGMSAAMQIVRNDENANVVTLEK 33 nYVIig daag A qivRnden nvVtle #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################