################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:55 2021 # Report_file: c_0970_64.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00120.pdb # 2: usage_00239.pdb # 3: usage_00240.pdb # 4: usage_00241.pdb # 5: usage_00242.pdb # 6: usage_00243.pdb # 7: usage_00244.pdb # 8: usage_00245.pdb # 9: usage_00246.pdb # 10: usage_00247.pdb # 11: usage_00248.pdb # 12: usage_00398.pdb # 13: usage_00699.pdb # # Length: 61 # Identity: 20/ 61 ( 32.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 61 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 61 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 ---GKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTK--LYGASG-ASIYQRYLAN-- 52 usage_00239.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00240.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00241.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00242.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00243.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00244.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00245.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00246.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00247.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00248.pdb 1 DLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQAL 60 usage_00398.pdb 1 ---GKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTK--LYGASGAMSIYQRYLAN-- 53 usage_00699.pdb 1 DLAGKTGTTNDSKDGWFSGYNSDYVTSVWVGFDQPETLGRREYGGTVALPIWIRYMGFAL 60 GKTGTTN D WFaG g VT tWVG D YG I usage_00120.pdb - usage_00239.pdb 61 Q 61 usage_00240.pdb 61 Q 61 usage_00241.pdb 61 Q 61 usage_00242.pdb 61 Q 61 usage_00243.pdb 61 Q 61 usage_00244.pdb 61 Q 61 usage_00245.pdb 61 Q 61 usage_00246.pdb 61 Q 61 usage_00247.pdb 61 Q 61 usage_00248.pdb 61 Q 61 usage_00398.pdb - usage_00699.pdb 61 K 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################