################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:58 2021 # Report_file: c_0134_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00042.pdb # 6: usage_00063.pdb # 7: usage_00079.pdb # # Length: 192 # Identity: 59/192 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 92/192 ( 47.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/192 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -----NHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAV 55 usage_00019.pdb 1 -----NHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAV 55 usage_00020.pdb 1 -----NHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAV 55 usage_00021.pdb 1 -----NHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAV 55 usage_00042.pdb 1 GVEGYHHLFKEILDNAVDEALAGYATEILVRLNEDGSLTVEDNGRGIPVDLMPEEGKPAV 60 usage_00063.pdb 1 -----NHLAQEVIDNSVDEALAGHAKQIEVTLYKDGSCEVSDDGRGMPVDIHPEEKIPGV 55 usage_00079.pdb 1 ----PNHLAQEVIDNSVDEALAGHAKQIEVTLYKDGSCEVSDDGRGMPVDIHPEEKIPGV 56 nHL qEviDNsVDEALAGhAk V L D S eV DdGRGmPVDihPEE P V usage_00018.pdb 56 ELILCI-------------------------SVVNALSKRVEVNVRRDGQVYNIAFENGE 90 usage_00019.pdb 56 ELILCI-------------------------SVVNALSKRVEVNVRRDGQVYNIAFENGE 90 usage_00020.pdb 56 ELILCRLHAGG-KFSNKNY-QFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGE 113 usage_00021.pdb 56 ELILCRLHAGG-KFSNKNY-QFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGE 113 usage_00042.pdb 61 EVIYNTLHSGGKFEQG--AYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFSRGE 118 usage_00063.pdb 56 ELILTRL----------------------GVSVVNALSTKVELFIKREGSEHRMEFRDGN 93 usage_00079.pdb 57 ELILTR-------------------LHGVGVSVVNALSTKVELFIKREGSEHRMEFRDGN 97 ElIl SVVNALS ve R G F G usage_00018.pdb 91 KVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDE 150 usage_00019.pdb 91 KVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDE 150 usage_00020.pdb 114 KVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDE 173 usage_00021.pdb 114 KVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDE 173 usage_00042.pdb 119 VTEPLRVVGEAPRGKTGTRVTFKPDPEIFGNLRFDPSKIRARLREVAYLVAGLKLVFQDR 178 usage_00063.pdb 94 AASKLEVVGTVGKKNTGTRLRFWADPKYFDTPKFNVRALRHLLRAKAVLCPGLTVKLHDE 153 usage_00079.pdb 98 AASKLEVVGTVGKKNTGTRLRFWADPKYFDTPKFNVRALRHLLRAKAVLCPGLTVKLHDE 157 L VVGt gk nTGT Fw D Fd p F v l h L akAvLcpG De usage_00018.pdb 151 INNTEQRWCYQD 162 usage_00019.pdb 151 INNTEQRWCYQD 162 usage_00020.pdb 174 INNTEQRWCYQ- 184 usage_00021.pdb 174 INNTEQRWC--- 182 usage_00042.pdb 179 QHGKEEVFLDK- 189 usage_00063.pdb 154 ATGEQDSWYFEN 165 usage_00079.pdb 158 ATGEQDSWYFEN 169 w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################