################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:44 2021 # Report_file: c_0618_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00081.pdb # 4: usage_00082.pdb # 5: usage_00085.pdb # 6: usage_00086.pdb # 7: usage_00099.pdb # 8: usage_00170.pdb # 9: usage_00242.pdb # # Length: 70 # Identity: 17/ 70 ( 24.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 70 ( 67.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 70 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 TAAQFKVLSSIRSAASITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN-----PNVL 55 usage_00047.pdb 1 TAAQFKVLSSIRSAASITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN-----PNGV 55 usage_00081.pdb 1 TAAQFKVLSSIRSAASITPVELKKVLSVDLGALTRMLDRLVSKGWVERLPN-----PNDK 55 usage_00082.pdb 1 TAAQFKVLSSIRSAASITPVELKKVLSVDLGALTRMLDRLVSKGWVERLPNVLVKL---- 56 usage_00085.pdb 1 TAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVSKGWVERLPN-----PNDK 55 usage_00086.pdb 1 TAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVSKGWVERLPN-----PNDK 55 usage_00099.pdb 1 TAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN-----PNDK 55 usage_00170.pdb 1 TPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDR------AY 54 usage_00242.pdb 1 TAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN-----PNDK 55 TaAQFkvL sIr aa itPvELkkvLsVdlgalTrmldRLv kGwveRlPn usage_00046.pdb 56 VKL------- 58 usage_00047.pdb 56 LVKL------ 59 usage_00081.pdb 56 R---GVLVKL 62 usage_00082.pdb ---------- usage_00085.pdb 56 R---GVLVK- 61 usage_00086.pdb 56 R---GVLVKL 62 usage_00099.pdb 56 R---GVLVKL 62 usage_00170.pdb 55 FLVI------ 58 usage_00242.pdb 56 R---GVLVK- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################