################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:30 2021 # Report_file: c_1018_49.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00114.pdb # 2: usage_00115.pdb # 3: usage_00179.pdb # 4: usage_00255.pdb # 5: usage_00256.pdb # 6: usage_00275.pdb # # Length: 79 # Identity: 0/ 79 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 79 ( 5.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 79 ( 67.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 PRVCITRGLTKRRLSQE--Q-----AMVE-RLLRGAARLDVEVIATL-S----DDE---- 43 usage_00115.pdb 1 PRVCITRGLT-------KRE-----RLLR-GAARLDVEVIATLSDDE-V----REM---- 38 usage_00179.pdb 1 RRVCLTL-------------QVSI----E-ELLGAVGDVDAEIIATF-D----AQQLEGV 37 usage_00255.pdb 1 PRILVTS-----------------GGFLR-GLVADMAALDAEVVIAT-L----DEVAE-E 36 usage_00256.pdb 1 PRILVTS-----------------G----SGLVADMAALDAEVVIAT-L----DEVAE-- 32 usage_00275.pdb 1 VAITMG--TIELQAF-G--I-----GAVE-PIIAAAGEVDADFVLALGDLDIS-PL---- 44 r t da usage_00114.pdb 44 VELPSNVRVHE-------- 54 usage_00115.pdb 39 GELPSNVRVHE-------- 49 usage_00179.pdb 38 ANIPDNVRTV--------- 47 usage_00255.pdb 37 -----------VRAG---- 40 usage_00256.pdb 33 ---------------VRAG 36 usage_00275.pdb 45 GTLPRNVRAVG-------- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################