################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:29:53 2021 # Report_file: c_0295_2.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00001.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # 6: usage_00046.pdb # 7: usage_00047.pdb # 8: usage_00048.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00056.pdb # 12: usage_00057.pdb # 13: usage_00058.pdb # 14: usage_00059.pdb # 15: usage_00060.pdb # 16: usage_00061.pdb # 17: usage_00085.pdb # 18: usage_00086.pdb # 19: usage_00087.pdb # 20: usage_00088.pdb # 21: usage_00089.pdb # 22: usage_00090.pdb # 23: usage_00091.pdb # 24: usage_00122.pdb # 25: usage_00123.pdb # 26: usage_00124.pdb # 27: usage_00127.pdb # # Length: 106 # Identity: 20/106 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/106 ( 35.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/106 ( 16.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 PVVAFSKVS--SFDEALEVANNT-EYGLTGAVITKNRDHINRAKQEF--HVGNLYFNRNC 55 usage_00042.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00043.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00044.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00045.pdb 1 -VLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 54 usage_00046.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00047.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00048.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00054.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00055.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00056.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00057.pdb 1 -VLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 54 usage_00058.pdb 1 -VLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 54 usage_00059.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00060.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00061.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00085.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00086.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00087.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00088.pdb 1 -VLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 54 usage_00089.pdb 1 PVLAVMRAK--DFDQAIEWANST-QFALTGGIFSRSPEHLAKARREF--RVGNLYINRNN 55 usage_00090.pdb 1 PVLAVMRAK--DFDQAIEWANST-QFALTGGIFSRSPEHLAKARREF--RVGNLYINRNN 55 usage_00091.pdb 1 PLLSVHVYPDERYEQILDVIDTGSRYALTGAVIADDRQAVLTALDRLRFAAGNFYVNDKP 60 usage_00122.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00123.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 usage_00124.pdb 1 -VLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 54 usage_00127.pdb 1 PVLSVIRVK--DFAEALEVANDT-PYGLTGGVYSRKREHLEWARREF--HVGNLYFNRKI 55 vl v f a e an t LTG h A ef vGNlY Nr usage_00001.pdb 56 TGAIVGYHPFGGFK-----MSGTDSKAGGPDYLALHMQAKTISEMF 96 usage_00042.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00043.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00044.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00045.pdb 55 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 94 usage_00046.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00047.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00048.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00054.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00055.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00056.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00057.pdb 55 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 94 usage_00058.pdb 55 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 94 usage_00059.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00060.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00061.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00085.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00086.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00087.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00088.pdb 55 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 94 usage_00089.pdb 56 TGALVERQPFGGAR-----MSGVGTKAGGPDYLLHFMDPRVVTEN- 95 usage_00090.pdb 56 TGALVERQPFGGAR-----MSGVGTKAGGPDYLLHFMDPRVVTEN- 95 usage_00091.pdb 61 TGAVVGRQPFGGARGSDTN-----DKAGSPLNLLRWTSARSIKETF 101 usage_00122.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00123.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 usage_00124.pdb 55 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 94 usage_00127.pdb 56 TGALVGVQPFGGFK-----LSGTNAKTGALDYLRLFLEMKAVAER- 95 TGA V qPFGG K G dyL E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################