################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:11 2021 # Report_file: c_0261_16.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00071.pdb # 5: usage_00072.pdb # 6: usage_00162.pdb # 7: usage_00163.pdb # 8: usage_00164.pdb # 9: usage_00165.pdb # 10: usage_00166.pdb # 11: usage_00167.pdb # 12: usage_00168.pdb # # Length: 149 # Identity: 54/149 ( 36.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/149 ( 36.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/149 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00021.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00022.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00071.pdb 1 ELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKM 60 usage_00072.pdb 1 ELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKM 60 usage_00162.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00163.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00164.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00165.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00166.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00167.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 usage_00168.pdb 1 EKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEAL 60 E T RA Q SS A S E A PE RW QLY D K V AE usage_00020.pdb 61 GFKALVITIDTPVLGNRRRDKRNQ-------LNLEANILKAA--LFP----KASFCWNDL 107 usage_00021.pdb 61 GFKALVITIDTPVLGNRRRDKRNQ-------LNLEANILKAA--LFP----KASFCWNDL 107 usage_00022.pdb 61 GFKALVITIDTPVLGNRRRDKRNQ-------LNLEANILKAA--LFP----KASFCWNDL 107 usage_00071.pdb 61 GYKAIFVTVDTPYLGNRLDDVRNRFK---LG------LAAYVAK-AI----DPSISWEDI 106 usage_00072.pdb 61 GYKAIFVTVDTPYLGNRLDDVRNRFK---LG------LAAYVAK-AI----DPSISWEDI 106 usage_00162.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA--------------------ALKASFCWNDL 100 usage_00163.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA--------------K-DLRALKEASFCWNDL 105 usage_00164.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA------------------LRALKASFCWNDL 102 usage_00165.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA-----------------------ASFCWNDL 97 usage_00166.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA--------------K-DLRALKEASFCWNDL 105 usage_00167.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA------------------RALKEASFCWNDL 102 usage_00168.pdb 61 GFKALVITIDTPVLGNRRRDKRNQLNLEA--------------K-DLRALKEASFCWNDL 105 G KA T DTP LGNR D RN S W D usage_00020.pdb 108 SLLQSITRLPIILKGILTKEDAELAMKHN 136 usage_00021.pdb 108 SLLQSITRLPIILKGILTKEDAELAMKHN 136 usage_00022.pdb 108 SLLQSITRLPIILKGILTKEDAELAMKHN 136 usage_00071.pdb 107 KWLRRLTSLPIVAKGILRGDDAREAVKH- 134 usage_00072.pdb 107 KWLRRLTSLPIVAKGILRGDDAREAVKH- 134 usage_00162.pdb 101 SLLQSITRLPIILKGILTKEDAELAMKHN 129 usage_00163.pdb 106 SLLQSITRLPIILKGILTKEDAELAMKHN 134 usage_00164.pdb 103 SLLQSITRLPIILKGILTKEDAELAMKHN 131 usage_00165.pdb 98 SLLQSITRLPIILKGILTKEDAELAMKHN 126 usage_00166.pdb 106 SLLQSITRLPIILKGILTKEDAELAMKHN 134 usage_00167.pdb 103 SLLQSITRLPIILKGILTKEDAELAMKHN 131 usage_00168.pdb 106 SLLQSITRLPIILKGILTKEDAELAMKHN 134 L T LPI KGIL DA A KH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################