################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:36 2021 # Report_file: c_0862_9.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00049.pdb # 2: usage_00050.pdb # 3: usage_00161.pdb # 4: usage_00162.pdb # 5: usage_00178.pdb # 6: usage_00179.pdb # 7: usage_00180.pdb # 8: usage_00181.pdb # 9: usage_00183.pdb # 10: usage_00237.pdb # 11: usage_00238.pdb # 12: usage_00239.pdb # 13: usage_00290.pdb # # Length: 109 # Identity: 57/109 ( 52.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/109 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/109 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00050.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00161.pdb 1 -------------SKYKDWFHIHEFPLQTEPRPNYDTFAF-VPQMPKLNTANPEVKRYLL 46 usage_00162.pdb 1 -------------SKYKDWFHIHEFPLQTEPRPNYDTFAF-VPQMPKLNTANPEVKRYLL 46 usage_00178.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00179.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETAAVQVPAMPKLRTENPEVKEYLF 47 usage_00180.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETYAVQVPAMPKLRTENPEVKEYLF 47 usage_00181.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00183.pdb 1 FFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 60 usage_00237.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00238.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00239.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 usage_00290.pdb 1 -------------SRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLF 47 S YKDWF I FP R NY T A VP MPKL T NPEVK YL usage_00049.pdb 48 DVARFWME-QGIDGWRLNVANEVDHAFWREFRRLVKSLNPDALIVG--- 92 usage_00050.pdb 48 DVARFWME-QGIDGWRLNVANEVDHAFWREFRRLVKSLNPDALIVG--- 92 usage_00161.pdb 47 DVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILG--- 92 usage_00162.pdb 47 DVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILG--- 92 usage_00178.pdb 48 DVARFWME-QGIDGWRLNVANEVDHAFWREFRRLVKSLNPDALIVG--- 92 usage_00179.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGE-- 93 usage_00180.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGE-- 93 usage_00181.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIW 95 usage_00183.pdb 61 DVARFWME-QGIDGWRLNVANEVDHAFWREFRRLVKSLNPDALIVGEIW 108 usage_00237.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIW 95 usage_00238.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGE-- 93 usage_00239.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGE-- 93 usage_00290.pdb 48 DVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVG--- 92 DVA W IDGWRL VANE DH FWREFR VK L PD I G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################