################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:40 2021 # Report_file: c_1200_674.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01145.pdb # 2: usage_01272.pdb # 3: usage_02976.pdb # 4: usage_03560.pdb # 5: usage_03561.pdb # 6: usage_03615.pdb # 7: usage_03616.pdb # 8: usage_04677.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 33 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 33 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01145.pdb 1 -SLEVIGKGTHCNQVEVIATLKDGRKICL-DPD 31 usage_01272.pdb 1 TSLEVIKAGPHCPTAQLIATLKNGRKIC----- 28 usage_02976.pdb 1 -DYDVQL-A---GLLLTTLKGS-GTVW-L-Q-- 23 usage_03560.pdb 1 QSLSVTPPGPHCAQTEVIATLKGGQKVCL-D-- 30 usage_03561.pdb 1 QSLSVTPPGPHCAQTEVIATLKGGQKVCL-D-- 30 usage_03615.pdb 1 -SLEVIKAGPHCPTAQLIATLKNGRKICL-D-- 29 usage_03616.pdb 1 -SLEVIKAGPHCPTAQLIATLKNGRKICL-D-- 29 usage_04677.pdb 1 -KLEIIPASLSCPRVEIIATMKKNDEQRCLN-- 30 l v iat k g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################