################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:00 2021 # Report_file: c_0912_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00052.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00068.pdb # 5: usage_00072.pdb # 6: usage_00077.pdb # 7: usage_00106.pdb # 8: usage_00111.pdb # 9: usage_00143.pdb # 10: usage_00149.pdb # 11: usage_00184.pdb # 12: usage_00230.pdb # # Length: 32 # Identity: 1/ 32 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 32 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 32 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -KELVLVLYDYQEK-SPRELTIKKGDILTLLN 30 usage_00066.pdb 1 -KELVLALYDYQEK-SPREVTMKKGDILT--- 27 usage_00067.pdb 1 -KELVLALYDYQEK-SPREVTMKKGDILT--- 27 usage_00068.pdb 1 KERHGVAIYNFQGS-GAPQLSLQIGDVVR--- 28 usage_00072.pdb 1 -ATKARVMYDFAAEPGNNELTVTEGEIIT--- 28 usage_00077.pdb 1 -KELVLALYDYQEK-SPREVTMKKGDILTLLN 30 usage_00106.pdb 1 --ELVLALYDYQEK-SPREVTMKKGDILT--- 26 usage_00111.pdb 1 -KELVLALYDYQEK-SPREVTMKKGDILTLLN 30 usage_00143.pdb 1 --ELVLALYDYQEK-SPAEVTMKKGDILTL-- 27 usage_00149.pdb 1 -ETVVIALYDYQTN-DPQELALRRNEEYC--- 27 usage_00184.pdb 1 --ELVLALYDYQEK-SPDEVTMKKGDILT--- 26 usage_00230.pdb 1 --ELVLVLYDYQEK-SPRELTVKKGDILT--- 26 Yd q e g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################