################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:14 2021 # Report_file: c_0264_5.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # # Length: 164 # Identity: 31/164 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/164 ( 32.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/164 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 KKQAEEYWDKAKKEIDL-----SKNTSLDLLVSDGEFEKKAGEFLQGQLQDSLEGLKVTV 55 usage_00029.pdb 1 AEMAKKLLADAG-----YPNGNNF-PLLKVKYNTSDSQRKIAEFIQNQWKKNLN-INVQL 53 usage_00030.pdb 1 AEMAKKLLADAG-----YPNGNNF-PLLKVKYNTSDSQRKIAEFIQNQWKKNLN-INVQL 53 usage_00031.pdb 1 VKEAQKAWKAGLKELGV-----NE-ITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKL 54 A k a n l rK EFiQ Q knL V l usage_00028.pdb 56 TPIPANVFMERLTKKDFTLSLSGWQADYADPISFLANFETNSP---MNHGGYSNKNYDEL 112 usage_00029.pdb 54 ENEEWSTYINSRVNGNYEIIRSGWSGDYADPMTFLSIFQTEN-TSFSS-YGYSNSEYDEL 111 usage_00030.pdb 54 ENEEWSTYINSRVNGNYEIIRSGWSGDYADPMTFLSIFQTEN-TSFSS-YGYSNSEYDEL 111 usage_00031.pdb 55 KNVPFKVRLQNDQNQDYDFSMSGWGPDYQDPSTFLDLFVTDGA---QNRMSYSNKDYDKI 111 n n y SGW DYaDP tFL F T gYSN YDel usage_00028.pdb 113 LKD----SS-SKRWQELKKAEKLLI-NDMGVVPIF--------- 141 usage_00029.pdb 112 LIKSDNERDIFKRQEILKKAEAIIIERDFPAVFLNITSSSYLFR 155 usage_00030.pdb 112 LIKSDNERDIFKRQEILKKAEAIIIERDFPAVFLNITSSSYLFR 155 usage_00031.pdb 112 LN-------DQKRWDEMVKAEKILLTDDVAIQPLY--------- 139 L KR lkKAE i i D v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################