################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:46 2021 # Report_file: c_0769_68.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00260.pdb # 2: usage_00261.pdb # 3: usage_00262.pdb # 4: usage_01012.pdb # 5: usage_01013.pdb # # Length: 129 # Identity: 48/129 ( 37.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/129 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/129 ( 21.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 PNTDVTSLNLPEYCRN-----GECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYE 55 usage_00261.pdb 1 PNTDVTSLNLPEYCRN-----GECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYE 55 usage_00262.pdb 1 PNTDVTSLNLPEYCRN-----GECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYE 55 usage_01012.pdb 1 ----------------YKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQGSHGPTYYK 44 usage_01013.pdb 1 ----------------YKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQGSHGPTYYK 44 LD LL F E LN LH GSHGPTYY usage_00260.pdb 56 RYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHY 115 usage_00261.pdb 56 RYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHY 115 usage_00262.pdb 56 RYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHY 115 usage_01012.pdb 45 RYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEQKSYESSLFY 104 usage_01013.pdb 45 RYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEQKSYESSLFY 104 RY KFTPTCDTNE KC L NTYDNT LY D I L ES Y usage_00260.pdb 116 VSDHGESLG 124 usage_00261.pdb 116 VSDHGESLG 124 usage_00262.pdb 116 VSDHGESLG 124 usage_01012.pdb 105 LSDH----- 108 usage_01013.pdb 105 LS------- 106 S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################