################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:21 2021 # Report_file: c_0021_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00016.pdb # 2: usage_00140.pdb # 3: usage_00156.pdb # 4: usage_00157.pdb # 5: usage_00158.pdb # # Length: 283 # Identity: 116/283 ( 41.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/283 ( 41.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/283 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -----IALGTGTKWKQA-QTINDVSTELVDNILLGLKLGFRHIDTAEAYNTQKEVGEALK 54 usage_00140.pdb 1 -----IALGTGT-KWKQAQTINDVSTELVDNILLGLKLGFRHIDTAEAYNTQKEVGEALK 54 usage_00156.pdb 1 NKIPAVAFGTGTKYFKR-G-HNDLDKQLIGTLELALRSGFRHIDGAEIYGTNKEIGIALK 58 usage_00157.pdb 1 ----AVAFGTGTKYFKR-G-HNDLDKQLIGTLELALRSGFRHIDGAEIYGTNKEIGIALK 54 usage_00158.pdb 1 ----AVAFGTGTKYFKR-G-HNDLDKQLIGTLELALRSGFRHIDGAEIYGTNKEIGIALK 54 A GTGT k ND L L L GFRHID AE Y T KE G ALK usage_00016.pdb 55 RTDVPREDIWVTTKYSPGWGS---IKAYSKSPSDSIDKALAQLGVDYVDLFLIHSPFFTT 111 usage_00140.pdb 55 RTDVPREDIWVTTKYSP--------GAYSKSPSDSIDKALAQLGVDYVDLFLIHSPFFTT 106 usage_00156.pdb 59 NVGLNRKDVFITDKYNSGNHTYDGKHSKHQNPYNALKADLEDLGLEYVDLYLIHFPYISE 118 usage_00157.pdb 55 NVGLNRKDVFITDKYNSGNHTYDGKHSKHQNPYNALKADLEDLGLEYVDLYLIHFPYISE 114 usage_00158.pdb 55 NVGLNRKDVFITDKYNSGNHTYDGKHSKHQNPYNALKADLEDLGLEYVDLYLIHFPYISE 114 R D T KY P L LG YVDL LIH P usage_00016.pdb 112 EQTHGYTLEQAWEALVEAKKAGKVREIGISNAAIPHLEKLFAASPSPEYYPVVNQIEFHP 171 usage_00140.pdb 107 EQTHGYTLEQAWEALVEAKKAGKVREIGISNAAIPHLEKLFAASPSPEYYPVVNQIEFHP 166 usage_00156.pdb 119 KSH-GFDLVEAWRYLERAKNEGLARNIGVSNFTIENLKSILDAN-T-DSIPVVNQIEFSA 175 usage_00157.pdb 115 KSH-GFDLVEAWRYLERAKNEGLARNIGVSNFTIENLKSILDAN-T-DSIPVVNQIEFSA 171 usage_00158.pdb 115 KSH-GFDLVEAWRYLERAKNEGLARNIGVSNFTIENLKSILDAN-T-DSIPVVNQIEFSA 171 G L AW L AK G R IG SN I L A PVVNQIEF usage_00016.pdb 172 FLQNQSKNIVRFCQEHGILVEAFSPLAPLARVETNALAETLKRLAEKYKKTEAQVLLRYT 231 usage_00140.pdb 167 FLQNQSKNIVRFCQEHGILVEAFSPLAPLARVETNALAETLKRLAEKYKKTEAQVLLRYT 226 usage_00156.pdb 176 YLQDQTPGIVEYSQQQGILIEAYGPLGPITQGRPGPLDKVLSKLSEKYKRNEGQILLRWV 235 usage_00157.pdb 172 YLQDQTPGIVEYSQQQGILIEAYGPLGPITQGRPGPLDKVLSKLSEKYKRNEGQILLRWV 231 usage_00158.pdb 172 YLQDQTPGIVEYSQQQGILIEAYGPLGPITQGRPGPLDKVLSKLSEKYKRNEGQILLRWV 231 LQ Q IV Q GIL EA PL P L L L EKYK E Q LLR usage_00016.pdb 232 LQRGILPVTTSSKESRLKESLNLFDFELTDEEVNEINKIGDAN 274 usage_00140.pdb 227 LQRGILPVTTSSKESRLKESLNLFDFELTDEEVNEINKIGDAN 269 usage_00156.pdb 236 LQRGILPITTTSKEERINDVLEIFDFELDKEDEDQITKVGKEK 278 usage_00157.pdb 232 LQRGILPITTTSKEERINDVLEIFDFELDKEDEDQITKVGKEK 274 usage_00158.pdb 232 LQRGILPITTTSKEERINDVLEIFDFELDKEDEDQITKVGKEK 274 LQRGILP TT SKE R L FDFEL E I K G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################