################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:01 2021 # Report_file: c_1429_21.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00079.pdb # 2: usage_00233.pdb # 3: usage_00293.pdb # 4: usage_00306.pdb # 5: usage_00659.pdb # 6: usage_00717.pdb # 7: usage_00873.pdb # 8: usage_00941.pdb # 9: usage_01302.pdb # 10: usage_01303.pdb # 11: usage_01359.pdb # 12: usage_01406.pdb # 13: usage_01407.pdb # 14: usage_01410.pdb # 15: usage_01411.pdb # # Length: 62 # Identity: 11/ 62 ( 17.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 62 ( 27.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 62 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 SRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSH 60 usage_00233.pdb 1 TPAVFEGWFPNR-------NPFYTYDGLVSASNGYPEFGTTGSLDDQKRELAAFLGNINQ 53 usage_00293.pdb 1 SHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSH 60 usage_00306.pdb 1 SEAQFNQMFPNR-------NAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSH 53 usage_00659.pdb 1 -ASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSH 59 usage_00717.pdb 1 TPAVFEGWFPNR-------NPFYTYDGLVSASNGYPEFGTTGSLDDQKRELAAFLGNINQ 53 usage_00873.pdb 1 SEAQFNQMFPNR-------NAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSH 53 usage_00941.pdb 1 SRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSH 60 usage_01302.pdb 1 SRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSH 60 usage_01303.pdb 1 SRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSH 60 usage_01359.pdb 1 -RATFDQMLKHRNDGACPARGFYTYDAFIAAARAFPSFGNTGDTATRKREIAAFLGQTSH 59 usage_01406.pdb 1 SHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSH 60 usage_01407.pdb 1 SHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSH 60 usage_01410.pdb 1 SHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSH 60 usage_01411.pdb 1 SHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSH 60 F r FytY A p F TG Kr AAFl usage_00079.pdb 61 ET 62 usage_00233.pdb 54 A- 54 usage_00293.pdb 61 QT 62 usage_00306.pdb 54 ET 55 usage_00659.pdb 60 ET 61 usage_00717.pdb 54 A- 54 usage_00873.pdb 54 ET 55 usage_00941.pdb 61 ET 62 usage_01302.pdb 61 ET 62 usage_01303.pdb 61 ET 62 usage_01359.pdb 60 ET 61 usage_01406.pdb 61 ET 62 usage_01407.pdb 61 ET 62 usage_01410.pdb 61 ET 62 usage_01411.pdb 61 ET 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################