################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:34 2021 # Report_file: c_0821_43.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00144.pdb # 2: usage_00454.pdb # 3: usage_00579.pdb # 4: usage_00996.pdb # 5: usage_00997.pdb # 6: usage_00998.pdb # 7: usage_00999.pdb # 8: usage_01000.pdb # 9: usage_01001.pdb # 10: usage_01002.pdb # 11: usage_01003.pdb # 12: usage_01004.pdb # # Length: 111 # Identity: 20/111 ( 18.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/111 ( 37.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/111 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 LDDVREALAEVGITGMTVTEVKGFGR----------------Q-----------KGHTEL 33 usage_00454.pdb 1 LEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSV------------------- 41 usage_00579.pdb 1 LNEVLKALFQAEVRGLTLSRVQGHGG---------------ET----------------- 28 usage_00996.pdb 1 LDEVREALTSLGIQGLTVSEVKGFG----------------------------------- 25 usage_00997.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR----------------Q-----------K----- 28 usage_00998.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR----------------Q-----------K----- 28 usage_00999.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR----------------Q-----------K----- 28 usage_01000.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR----------------Q-----------K----- 28 usage_01001.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR---------------------EIYRGAEY----- 34 usage_01002.pdb 1 LDEVREALTSLGIQGLTVSEVKGFGR----------------QKGQTEIYRGAEY----- 39 usage_01003.pdb 1 LDEVREALTSLGIQGLTVSEVKGF------------------------------------ 24 usage_01004.pdb 1 LDEVREALTSLGIQGLTVSEVKGF------------------------------------ 24 L VreAL gi GlTv eVkGf usage_00144.pdb 34 YRGAEYM-VDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFD 83 usage_00454.pdb 42 ---------NFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAE 83 usage_00579.pdb 29 ---------ELHEKVRLEIGVSEPFVKPTVEAILKAARTGEVGDGKIFVLP 70 usage_00996.pdb 26 ---------SFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 67 usage_00997.pdb 29 -------G-SFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 71 usage_00998.pdb 29 -------G-SFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 71 usage_00999.pdb 29 -------GVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 72 usage_01000.pdb 29 -------G-SFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 71 usage_01001.pdb 35 -------SVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 78 usage_01002.pdb 40 -------SVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 83 usage_01003.pdb 25 ----------FLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 65 usage_01004.pdb 25 ----------FLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLD 65 flpKVk e v dd v i kaA TG iGDGKIFV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################