################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:21 2021 # Report_file: c_0974_102.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00386.pdb # 2: usage_00446.pdb # 3: usage_01107.pdb # 4: usage_01160.pdb # # Length: 76 # Identity: 1/ 76 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 76 ( 21.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 76 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00386.pdb 1 IRVASIDIGSYSV-----RLTIAQIKDGKLSIILERGRITSLGTK-VKETGRLQEDRIEE 54 usage_00446.pdb 1 -EFAAVDLGSNSF-----HMVIARVVDGAMQIIGRLKQRVHLADG-LGPDNMLSEEAMTR 53 usage_01107.pdb 1 QEFAAVDLGSNSF-----H-VIARVVDGA-QIIGRLKQRVHLADG-LGPDN-LSEE-ATR 50 usage_01160.pdb 1 --GEFLALDL---GGTNFRVLWVKV--VE-MENQIYAIPE-----DIMRGS--GTQLFDH 45 a dlgs ia v g ii e usage_00386.pdb 55 TIQVLKEYKKLIDEFK 70 usage_00446.pdb 54 GLNCLSLFAERLQ--- 66 usage_01107.pdb 51 GLNCLSLFAERL---- 62 usage_01160.pdb 46 IAECLANFMDKL---- 57 cL f l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################