################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:26 2021 # Report_file: c_1488_90.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00081.pdb # 2: usage_00473.pdb # 3: usage_02491.pdb # 4: usage_02492.pdb # 5: usage_02493.pdb # 6: usage_04573.pdb # 7: usage_04574.pdb # 8: usage_05306.pdb # 9: usage_06739.pdb # 10: usage_07442.pdb # 11: usage_07726.pdb # # Length: 23 # Identity: 0/ 23 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 23 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 23 ( 43.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 M-KGYHAMMVDIAVQLVQKWERL 22 usage_00473.pdb 1 --IPDKTELNQVAKSAVAALKS- 20 usage_02491.pdb 1 D-KSLLNKAIEAALAARKEWDLK 22 usage_02492.pdb 1 D-KSLLNKAIEAALAARKEWDLK 22 usage_02493.pdb 1 D-KSLLNKAIEAALAARKEWDLK 22 usage_04573.pdb 1 --KSLLNKAIEAALAARKEWDLK 21 usage_04574.pdb 1 --KSLLNKAIEAALAARKEWDLK 21 usage_05306.pdb 1 DE-SDTAKAVEVQNKPMIEWALG 22 usage_06739.pdb 1 E-YSDVPKFIRDVSIKQHEWMRE 22 usage_07442.pdb 1 P-QVEQLARQKMWNLA------- 15 usage_07726.pdb 1 --GGQEDQLIDIALEIKRELDSG 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################