################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:20 2021 # Report_file: c_1484_75.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00199.pdb # 2: usage_02949.pdb # 3: usage_02950.pdb # 4: usage_02951.pdb # 5: usage_02952.pdb # 6: usage_02953.pdb # 7: usage_02954.pdb # 8: usage_02955.pdb # 9: usage_02956.pdb # # Length: 73 # Identity: 11/ 73 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 73 ( 27.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 73 ( 53.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00199.pdb 1 --------ETVRSIT---Q-L-EALTKLKKDRGGDAKQY-----------QVWQRESKAL 36 usage_02949.pdb 1 MTQLEEQLHNVETVRSITMQLEMALTKLKKD-----MMRGGDAKQYQVWQRESKALESAI 55 usage_02950.pdb 1 MTQLEEQLHNVETVRSITMQLEMALTKLKKD-----MM-------YQVWQRESKALESAI 48 usage_02951.pdb 1 -TQLEEQLHNVETVRSITMQLEMALTKLKKD-----MMRG----------QVWQRESKAL 44 usage_02952.pdb 1 -TQLEEQLHNVETVRSITMQLEMALTKLKKD-----MMRGGDAKQYQVWQRESKALESAI 54 usage_02953.pdb 1 MTQLEEQLHNVETVRSITMQLEMALTKLKKD-----MMRGGDAKQYQVWQRESKALESAI 55 usage_02954.pdb 1 MTQLEEQLHNVETVRSITMQLEMALTKLKKD-----M--------------ESKALESAI 41 usage_02955.pdb 1 -TQLEEQLHNVETVRSITMQLEMALTKLKKD-----MM----------WQRESKALESAI 44 usage_02956.pdb 1 MTQLEEQLHNVETVRSITMQLEMALTKLKKD-----MMRGGDAKQYQVWQRESKALESAI 55 hnVetvr m L mALTKLKKD m A usage_00199.pdb 37 ESAIAIIHYV-AG 48 usage_02949.pdb 56 AIIHYV------- 61 usage_02950.pdb 49 AIIHYVAG----- 56 usage_02951.pdb 45 ESAIAII------ 51 usage_02952.pdb 55 AIIHYVAGDLK-- 65 usage_02953.pdb 56 AIIHYV------- 61 usage_02954.pdb 42 AIIHYVAG----- 49 usage_02955.pdb 45 AIIHYVAG----- 52 usage_02956.pdb 56 AIIHYVAGDL--- 65 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################