################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:01 2021 # Report_file: c_0401_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00119.pdb # 3: usage_00143.pdb # 4: usage_00144.pdb # 5: usage_00174.pdb # 6: usage_00175.pdb # 7: usage_00181.pdb # 8: usage_00198.pdb # 9: usage_00219.pdb # 10: usage_00226.pdb # 11: usage_00237.pdb # # Length: 95 # Identity: 2/ 95 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 95 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 95 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----LTQPPSVSVSPGQTVNITCSGDT-----L---GDKY-VCWYQQKPGQSPVLVIYQ- 46 usage_00119.pdb 1 --FMLTQPHSVSESPGKTVTISCTGSS--G-SI---ASNY-VQWYQQRPGSSPTTVIYE- 50 usage_00143.pdb 1 --IELTQPPSVSVAPGQTARISCSGDS-----I---GKKY-AYWYQQKPGQAPVLVIYK- 48 usage_00144.pdb 1 ---ELTQPPSVSVAPGQTARISCSGDS-----I---GKKY-AYWYQQKPGQAPVLVIYK- 47 usage_00174.pdb 1 ----LTQSASVSGSLGQSVTISCTGPNS-VC-C---SHKS-ISWYQWPPGRAPTLIIYE- 49 usage_00175.pdb 1 ---ELTQETGVSVALGRTVTITCRGDS-----L---RSHY-ASWYQKKPGQAPILLFYG- 47 usage_00181.pdb 1 --MHVAQPAVVLASSRGIASFVCEYAS------PGKATEVRVTVLRQADSQ-VTEVCAAT 51 usage_00198.pdb 1 VQLQESGG--GSVQAGGSLRLSCAASGYT---S---GRDS-MGWFRQAPGKEREGVACID 51 usage_00219.pdb 1 ---VLTQPTFLSASPGASARLSCTLSSG-I-NV---GSYS-IFWYQQKPGSPPRYLLYYY 51 usage_00226.pdb 1 -DIELTQPPSVSVAPGQTARISCSGDS-----I---GKKY-AYWYQQKPGQAPVLVIYK- 49 usage_00237.pdb 1 ---ELTQETGVSVALGRTVTITCRGDS-----L---RSHY-ASWYQKKPGQAPILLFYG- 47 q s g C w pg usage_00001.pdb 47 ----DTKRPSG-IP-ERFSGSNSG--DTATLTVSG 73 usage_00119.pdb 51 ----DNQRPSG-VP-DRFSGSIDSSSNSASLTISG 79 usage_00143.pdb 49 ----K--RPSGIP--ERFSGSNSG--NTATLTISG 73 usage_00144.pdb 48 ----K---------RERFSGSNSG--NTATLTISG 67 usage_00174.pdb 50 ----DNERAPG-IS-PRFSGYKSY--WSAYLTISD 76 usage_00175.pdb 48 ----KNNRPSG-VP-DRFSGSASG--NRASLTISG 74 usage_00181.pdb 52 YMMGNELTFLD-D--SICTGTSSG--NQVNLTIQG 81 usage_00198.pdb 52 T-SGIVNYADS-VK-GRFTISQDSAKKTLYLEMN- 82 usage_00219.pdb 52 S-DSSKYQGSG-VP-SRFSGSKDASANAGLLLISG 83 usage_00226.pdb 50 ----K---------RERFSGSNSG--NTATLTISG 69 usage_00237.pdb 48 ----KNNRPSG-VP-DRFSGSASG--NRASLTISG 74 rf g L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################