################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:11 2021 # Report_file: c_1148_439.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00231.pdb # 2: usage_00232.pdb # 3: usage_00346.pdb # 4: usage_00563.pdb # 5: usage_01986.pdb # 6: usage_02118.pdb # 7: usage_02614.pdb # 8: usage_03653.pdb # 9: usage_03838.pdb # 10: usage_03839.pdb # # Length: 37 # Identity: 1/ 37 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 37 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 37 ( 40.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 ---R-KKRV-R---KGKVEYLVKWKGWPPKYSTWE-P 28 usage_00232.pdb 1 ---R-KKRV-R---KGKVEYLVKWKGWPPKYSTWE-P 28 usage_00346.pdb 1 ---L-DRRV-V---KGQVEYLLKWKGFSEEHNTWE-P 28 usage_00563.pdb 1 ---L-ADR-VNK--NGINEYYIKWAGYDWYDNTWE-P 29 usage_01986.pdb 1 -----RKKI-V---HGNTSYLVKWKNYSSKDNTWE-T 27 usage_02118.pdb 1 ---RILNHSVDK--KGHVHYLIKWRDLPYDQASWE-S 31 usage_02614.pdb 1 ---V-RVTR-K-LEE-DVIYHVKYDDYPENGVVQM-N 29 usage_03653.pdb 1 ESIE-KKRI-R---KGRVEYLVKWRGWSPKYNTWE-P 31 usage_03838.pdb 1 ---V-EKRG-K---GKDVEYLVRWKDGGD---CEWVK 26 usage_03839.pdb 1 --IG-KRVG-D--DGKTIEYLVKWTDMSD--ATWE-P 28 Y kw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################