################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:55 2021 # Report_file: c_0664_58.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00440.pdb # 2: usage_00555.pdb # 3: usage_00556.pdb # 4: usage_00681.pdb # 5: usage_00682.pdb # 6: usage_00691.pdb # 7: usage_00692.pdb # # Length: 72 # Identity: 42/ 72 ( 58.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 72 ( 63.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 72 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00440.pdb 1 AFFLVKFWADLNSTIQ--EGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEY 58 usage_00555.pdb 1 --FLVKFWADLNTN--IDDEGSAFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEY 56 usage_00556.pdb 1 --FLVKFWADLNTN-I--DDGSAFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEY 55 usage_00681.pdb 1 --FLVKFWADLNW--------GGFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETER 50 usage_00682.pdb 1 -FFLVKFWADLNW---------GFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETER 50 usage_00691.pdb 1 --FLVKFWADLNW---------GFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETER 49 usage_00692.pdb 1 AFFLVKFWADLNW---------GFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETER 51 FLVKFWADLN FYGVSSQYeS e M tcS KVCSFGKQVVEKVETE usage_00440.pdb 59 ARLENGRFVYRI 70 usage_00555.pdb 57 ARYENGHYLYRI 68 usage_00556.pdb 56 ARYENGHYLYRI 67 usage_00681.pdb 51 AQLEDGRFVYRL 62 usage_00682.pdb 51 AQLEDGRFVYRL 62 usage_00691.pdb 50 AQLEDGRFVYRL 61 usage_00692.pdb 52 AQLEDGRFVYRL 63 A E G YR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################