################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:26 2021 # Report_file: c_0199_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00105.pdb # 5: usage_00106.pdb # 6: usage_00107.pdb # 7: usage_00108.pdb # 8: usage_00228.pdb # 9: usage_00324.pdb # # Length: 177 # Identity: 28/177 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/177 ( 47.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/177 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00016.pdb 1 PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00017.pdb 1 PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00105.pdb 1 PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00106.pdb 1 PALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00107.pdb 1 PALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00108.pdb 1 PALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDAT-FAERVLFMNSGTEANETAFKLA 59 usage_00228.pdb 1 DRVVEALKAVAERGTSFG--APTEIENKLAKLVIERVPSIEI-VRVNSGTEAT-SALRLA 56 usage_00324.pdb 1 AKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKAS-ALERVFFTNSGTESIEGA-KTA 58 vealK q e l hts nE l li a Er f NSGTEa A klA usage_00015.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00016.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00017.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00105.pdb 60 RHYA-VRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 112 usage_00106.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00107.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00108.pdb 60 RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS-----DGF-GPKPADIIHVPF 113 usage_00228.pdb 57 RGYTG------RNKILKFIGCYHGHGDSLL-IK-AGSGVDSPGVPEGV---AKNTITVAY 105 usage_00324.pdb 59 RKYAFNKGVK-GGQFIAFKHSFHGRTLGALSLTANEKYQ-----KPF-KPLISGVKFAKY 111 R Ya kiiaF fHGr l ky f i v usage_00015.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00016.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00017.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00105.pdb 113 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 166 usage_00106.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00107.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00108.pdb 114 NDLHAVKAVM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE 167 usage_00228.pdb 106 NDLESVKYAFEQFGDDIACVIVEPVAG-NGVVPPQPGFLEGLREVTEQNGALLIFDE 161 usage_00324.pdb 112 NDISSVEKLV---NEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADE 165 NDl Vk d tcav vEp qG gGv a p FlkgLR lcde aLL fDE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################