################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:47 2021 # Report_file: c_0640_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00034.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00050.pdb # 9: usage_00098.pdb # # Length: 143 # Identity: 83/143 ( 58.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/143 ( 70.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/143 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --------------AASGLAAAKALANNADSLVNGAANAVYSKFPYTTSTPGNNFASTPE 46 usage_00034.pdb 1 -STEIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQR 59 usage_00045.pdb 1 ----------------ASMEAARALTNNAQSLIDGAAQAVYQKFPYTTTMQGSQYASTPE 44 usage_00046.pdb 1 SNTELQAVDGRFKRAVASMEAARALTNNAQSLIDGAAQAVYQKFPYTTTMQGSQYASTPE 60 usage_00047.pdb 1 -----------------GLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQR 43 usage_00048.pdb 1 -----------------GLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQR 43 usage_00049.pdb 1 -----------------GLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQR 43 usage_00050.pdb 1 -STEIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQR 59 usage_00098.pdb 1 --------------AVASMEAARALTNNAQSLIDGAAQAVYQKFPYTTTMQGSQYASTPE 46 eAA ALt A SLi GAAqAVY KFPYTT mqG yA usage_00006.pdb 47 GKAKCARDIGYYLRIVTYALVAGGTGPIDEYLLAGLDEINKTFDLAPSWYVEALKYIKAN 106 usage_00034.pdb 60 GKDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTFELSPSWYIEALKYIKAN 119 usage_00045.pdb 45 GKAKCARDIGYYLRMITYCLVAGGTGPMDEYLIAGLSEINSTFDLSPSWYIEALKYIKAN 104 usage_00046.pdb 61 GKAKCARDIGYYLRMVTYCLVAGGTGPMDEYLIAGLSEINSTFDLSPSWYIEALKYIKAN 120 usage_00047.pdb 44 GKDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTFELSPSWYIEALKYIKAN 103 usage_00048.pdb 44 GKDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTFELSPSWYIEALKYIKAN 103 usage_00049.pdb 44 GKDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTFELSPSWYIEALKYIKAN 103 usage_00050.pdb 60 GKDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTFELSPSWYIEALKYIKAN 119 usage_00098.pdb 47 GKAKCARDIGYYLRMVTYCLVAGGTGPMDEYLIAGLSEINSTFDLSPSWYIEALKYIKAN 106 GK KCARDIGYYLRmvTYcL AGGTGPmDEYLiAG EIN TF LsPSWYiEALKYIKAN usage_00006.pdb 107 HGLSGDSRDEANSYIDYLINALS 129 usage_00034.pdb 120 HGLSGDAAVEANSYLDYAINALS 142 usage_00045.pdb 105 HGLTGQAAVEANAYIDYAINALS 127 usage_00046.pdb 121 HGLTGQAAVEANAYIDYAINALS 143 usage_00047.pdb 104 HGLSGDAAVEANSYLDYAINALS 126 usage_00048.pdb 104 HGLSGDAAVEANSYLDYAINALS 126 usage_00049.pdb 104 HGLSGDAAVEANSYLDYAINALS 126 usage_00050.pdb 120 HGLSGDAAVEANSYLDYAINALS 142 usage_00098.pdb 107 HGLTGQAAVEANAYIDYAINALS 129 HGL G aavEAN Y DYaINALS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################