################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:59 2021 # Report_file: c_1434_210.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_02523.pdb # 2: usage_03235.pdb # 3: usage_03236.pdb # 4: usage_03237.pdb # # Length: 110 # Identity: 19/110 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/110 ( 60.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/110 ( 39.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02523.pdb 1 FSQ--LYSLLEYGRVFTCAAALGEA-QAAEDAVAWARGREA--Q--RIAD-LQQVQKLTE 52 usage_03235.pdb 1 -G-VKVLSGLDYERVVLSAGPLGIAACL-DVVVPYLHERKQ-----GEFQLQGKLADYVT 52 usage_03236.pdb 1 ---VKVLSGLDYERVVLSAGPLGIAACL-DVVVPYLHER--------EFQLQGKLADYVT 48 usage_03237.pdb 1 ---------LDYERVVLSAGPLGIAACL-DVVVPYLHERKQFGQPIGEFQLQGKLADYVT 50 LdYeRVvlsAgpLGiA cl dvvVpylheR efq qgkladyvt usage_02523.pdb 53 EVKLTNRNLVYGAAREYDRGEHKRLSVALKY------------------- 83 usage_03235.pdb 53 NAAR---AYVYAVAAACDRGETARKDAAGC-ILYAAEKATAALEAIQALG 98 usage_03236.pdb 49 NAAR---AYVYAVAAACDRGETARKDAAGC-ILYAAEKATAALEAIQALG 94 usage_03237.pdb 51 NAAR---AYVYAVAAACDRGETARKDAAGC-ILYAAEKATAALEAIQALG 96 naar ayVYavAaacDRGEtaRkdaAgc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################