################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:08 2021 # Report_file: c_0174_37.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00055.pdb # 2: usage_00180.pdb # 3: usage_00196.pdb # 4: usage_00197.pdb # 5: usage_00287.pdb # 6: usage_00332.pdb # # Length: 131 # Identity: 5/131 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/131 ( 6.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/131 ( 19.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 ----GAGTVL----NPQQLAEVTEAGAQFAISPGL---TEPLLKAATEGT--IPLIP-GI 46 usage_00180.pdb 1 ----GAGTVL----NPQQLAEVTEAGAQFAISPGL---TEPLLKAATEGT--IPLIP-GI 46 usage_00196.pdb 1 -PVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTV 59 usage_00197.pdb 1 -PVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTV 59 usage_00287.pdb 1 ----GAGTVL----NPQQLAEVTEAGAQFAISPGL---TEPLLKAATEGT--IPLIP-GI 46 usage_00332.pdb 1 CV--GAGTVL----DRSMFAAVEAAGAQFVVTPGI---TEDILEAGVDSE--IPLLP-GI 48 V G A usage_00055.pdb 47 STVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGI-SPANYRDYLA 105 usage_00180.pdb 47 STVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGI-SPANYRDYLA 105 usage_00196.pdb 60 LNPQQLAEVTEAGAQFAISPGL-----TEPLLKAATEG-TIPLIPG--ISTVSELMLGMD 111 usage_00197.pdb 60 LNPQQLAEVTEAGAQFAISPGL-----TEPLLKAATEG-TIPLIPG--ISTVSELMLGMD 111 usage_00287.pdb 47 STVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGI-SPANYRDYLA 105 usage_00332.pdb 49 STPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMA 107 l G l a P i usage_00055.pdb 106 LK-SVLCIGGS 115 usage_00180.pdb 106 LK-SVLCIGGS 115 usage_00196.pdb 112 YGLKEFKFFP- 121 usage_00197.pdb 112 YGLKEFKFFP- 121 usage_00287.pdb 106 LK-SVLCIGGS 115 usage_00332.pdb 108 LP-NVMCVGTT 117 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################