################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:04 2021 # Report_file: c_0579_15.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00008.pdb # 2: usage_00039.pdb # 3: usage_00201.pdb # 4: usage_00202.pdb # 5: usage_00203.pdb # 6: usage_00204.pdb # 7: usage_00205.pdb # 8: usage_00220.pdb # 9: usage_00226.pdb # 10: usage_00337.pdb # # Length: 91 # Identity: 2/ 91 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 91 ( 15.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 91 ( 29.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 AKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKV---EDG-KTDITFTCSRDVGP 56 usage_00039.pdb 1 AQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGH---DPS-RQQMAFTVKKDFAQ 56 usage_00201.pdb 1 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSV---EDG-TTDITFTCPRSDGR 56 usage_00202.pdb 1 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSV---EDG-TTDITFTCPRSDGR 56 usage_00203.pdb 1 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-F--------TTDITFTCPRSDGR 51 usage_00204.pdb 1 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-F-------STTDITFTCPRSDGR 52 usage_00205.pdb 1 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSV---EDG-TTDITFTCPRSDGR 56 usage_00220.pdb 1 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHD-----GN-SNDIAFTVVKDLLN 54 usage_00226.pdb 1 LTLIP--LVTGPGVLANLLDVFRDAGL-NTSFISRPIK-GRTGTY-SFIVTLDAAPW--E 53 usage_00337.pdb 1 AKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSK-----DG-KTDITFTCSRDVGP 54 a d PG aak f a d q ft usage_00008.pdb 57 AAVEKLDSLRNEIG-------FSQLLY-DD- 78 usage_00039.pdb 57 EALEALEPVLAEIG-------G--EAILRP- 77 usage_00201.pdb 57 RAMEILKKLQVQGN-------WTNVLYD-D- 78 usage_00202.pdb 57 RAMEILKKLQVNWT-------N--VLY-DD- 76 usage_00203.pdb 52 RAMEILKKLQVQWT-------N--VLY-DD- 71 usage_00204.pdb 53 RAMEILKKLQVQWT-------N--VLY-DD- 72 usage_00205.pdb 57 RAMEILKKLQVNWT-------N--VLY-DD- 76 usage_00220.pdb 55 TAEAVTSAIAPALRSYPEADQEAEIIV-EK- 83 usage_00226.pdb 54 ERFRDALVEIAEH--------GDWAKT-LA- 74 usage_00337.pdb 55 AAVEKLDSLRNEIG-------FSQLLY-DDH 77 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################