################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:17 2021 # Report_file: c_1021_38.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00081.pdb # 2: usage_00140.pdb # 3: usage_00182.pdb # 4: usage_00184.pdb # 5: usage_00253.pdb # 6: usage_00351.pdb # 7: usage_00352.pdb # 8: usage_00449.pdb # 9: usage_00473.pdb # 10: usage_00474.pdb # 11: usage_00475.pdb # 12: usage_00476.pdb # 13: usage_00489.pdb # 14: usage_00581.pdb # 15: usage_00640.pdb # 16: usage_00641.pdb # 17: usage_00710.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 68 ( 10.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 68 ( 57.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00140.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00182.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00184.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00253.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00351.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00352.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00449.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00473.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSPNG--YKEDEKGQ---ILQEGINELGAGCSWL 52 usage_00474.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSPNGQYYKEDEKGQ---ILQEGINELGAGCSWL 54 usage_00475.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSPNG---KEDEKGQ---ILQEGINELGAGCSWL 51 usage_00476.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSPNG---KEDEKGQ---ILQEGINELGAGCSWL 51 usage_00489.pdb 1 -TFISRGDDSGTH-KKEGFWAQTKIE--------PNF--GG---YRS-VGQGGPTLNA-- 42 usage_00581.pdb 1 IVPVIAN--S--PLSATRQFAL-------------------DERSLFEPNNAKDLSAKID 37 usage_00640.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00641.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 usage_00710.pdb 1 LVPIIAD--E-ARTFGMEGLFRQIGIYSP------EDEKGQ---ILQEGINELGAGCSWL 48 vpiia l n usage_00081.pdb 49 AAATS--- 53 usage_00140.pdb 49 AAATS--- 53 usage_00182.pdb 49 AAATS--- 53 usage_00184.pdb 49 AAATS--- 53 usage_00253.pdb 49 AAATS--- 53 usage_00351.pdb 49 AAATS--- 53 usage_00352.pdb 49 AAATS--- 53 usage_00449.pdb 49 AAATS--- 53 usage_00473.pdb 53 AAATS--- 57 usage_00474.pdb 55 AAATS--- 59 usage_00475.pdb 52 AAATS--- 56 usage_00476.pdb 52 AAATS--- 56 usage_00489.pdb 43 -----SEQ 45 usage_00581.pdb 38 WWLEN--- 42 usage_00640.pdb 49 AAATS--- 53 usage_00641.pdb 49 AAATS--- 53 usage_00710.pdb 49 AAATS--- 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################