################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:59 2021 # Report_file: c_0623_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # # Length: 79 # Identity: 46/ 79 ( 58.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 79 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 79 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NLKEIADIANKTGFVNVQTENMTPRFKEILLEERGHLEQNEAEFMSKFTQRERDSLISGW 60 usage_00002.pdb 1 -LKEIADIANKTGFVNVQTENMTPRFKEILLEERGHLEQNEAEFMSKFTQRERDSLISGW 59 usage_00021.pdb 1 -LEQIEEIAKKTGFIDIEVEN-TPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGW 58 usage_00022.pdb 1 -LEQIEEIAKKTGFIDIEVEN-TPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGW 58 usage_00023.pdb 1 NLEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGW 60 usage_00024.pdb 1 -LEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGW 59 usage_00025.pdb 1 -LEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGW 59 L I IA KTGF EN TPRFKEILLEER EQ F KF Q D L SGW usage_00001.pdb 61 TDKLGYIEKDNHNWNFFLA 79 usage_00002.pdb 60 TDKLGYIEKDNHNWNFFLA 78 usage_00021.pdb 59 KSKLQYIADDNHNWNFFAA 77 usage_00022.pdb 59 KSKLQYIADDNHNWNFFAA 77 usage_00023.pdb 61 KSKLQYIADDNHNWNFFAA 79 usage_00024.pdb 60 KSKLQYIADDNHNWNFFAA 78 usage_00025.pdb 60 KSKLQYIADDNHNWNFFAA 78 KL YI DNHNWNFF A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################