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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:35:31 2021
# Report_file: c_0224_6.html
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#====================================
# Aligned_structures: 7
#   1: usage_00053.pdb
#   2: usage_00110.pdb
#   3: usage_00116.pdb
#   4: usage_00117.pdb
#   5: usage_00118.pdb
#   6: usage_00182.pdb
#   7: usage_00183.pdb
#
# Length:        139
# Identity:      113/139 ( 81.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    113/139 ( 81.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           26/139 ( 18.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00053.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00110.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00116.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00117.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00118.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00182.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
usage_00183.pdb         1  PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG   60
                           PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG

usage_00053.pdb        61  EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  119
usage_00110.pdb        61  EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  119
usage_00116.pdb        61  EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  119
usage_00117.pdb        61  EASPVGEVRYEAPFY-------P-GRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  112
usage_00118.pdb        61  EASPVGEVRYEAPFY----TKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  116
usage_00182.pdb        61  EASPVGEVR------------------ELLIPAPLDPGTQETVQELALKAYKVLGVRGMA  102
usage_00183.pdb        61  EASPVGEVRYEA---------------ELLIPAPLD--TQETVQELALKAYKVLGVRGMA  103
                           EASPVGEVR                  ELLIPAPLD  TQETVQELALKAYKVLGVRGMA

usage_00053.pdb       120  RVDFFLAEGELYL------  132
usage_00110.pdb       120  RVDFFLAEGELYL------  132
usage_00116.pdb       120  RVDFFLAEGELYL------  132
usage_00117.pdb       113  RVDFFLAEGELYL------  125
usage_00118.pdb       117  RVDFFLAEGELYL------  129
usage_00182.pdb       103  RVDFFLAEGELYL------  115
usage_00183.pdb       104  RVDFFLAEGELYLNELNTI  122
                           RVDFFLAEGELYL      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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