################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:54 2021 # Report_file: c_0832_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00114.pdb # 2: usage_00353.pdb # 3: usage_00354.pdb # 4: usage_00458.pdb # 5: usage_00582.pdb # 6: usage_00583.pdb # 7: usage_00780.pdb # 8: usage_00809.pdb # # Length: 70 # Identity: 20/ 70 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 70 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 70 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 AADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGE-TLRFA 59 usage_00353.pdb 1 -ADKLSEMAKKLKVDAIVAPSTRPERLKEIKEIAELPVITPG-----------D-ILNIL 47 usage_00354.pdb 1 IADKLSEMAKKLKVDAIVAPSTRPERLKEIKEIAELP-VITPGVGAQGGKI-ED-ILNIL 57 usage_00458.pdb 1 -ADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGE-TLRFA 58 usage_00582.pdb 1 -ADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLIS------------PTLRFA 47 usage_00583.pdb 1 -ADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLIS------------PTLRFA 47 usage_00780.pdb 1 -ADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAAGGDPGE-TLRFA 58 usage_00809.pdb 1 -ADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGE-TLRFA 58 AD M L V V PSTRPERL EI L usage_00114.pdb 60 D---AIIVGR 66 usage_00353.pdb 48 DENDYVIVGR 57 usage_00354.pdb 58 DENDYVIVGR 67 usage_00458.pdb 59 D---AIIVGR 65 usage_00582.pdb 48 D---AIIAGR 54 usage_00583.pdb 48 D---AIIAGR 54 usage_00780.pdb 59 D---AIIVGA 65 usage_00809.pdb 59 D---AIIVGR 65 D I Gr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################