################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:00 2021 # Report_file: c_0378_48.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00141.pdb # 2: usage_00218.pdb # 3: usage_00267.pdb # 4: usage_00268.pdb # 5: usage_00269.pdb # 6: usage_00291.pdb # 7: usage_00556.pdb # 8: usage_00677.pdb # 9: usage_00678.pdb # 10: usage_00858.pdb # # Length: 143 # Identity: 34/143 ( 23.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/143 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/143 ( 39.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 TVQGVVRFLQLT-PERCLIEGTIDGLEPGLHGLHV-HQYGDLTNNCNSCGNHFNPDGASH 58 usage_00218.pdb 1 ---GIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNT-AGCTSAGPHFNPLSRKH 56 usage_00267.pdb 1 PVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGCTSAGPHFNPLSRKH 59 usage_00268.pdb 1 ---GIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGCTSAGPHFNPLSRKH 56 usage_00269.pdb 1 PVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGCTSAGPHFNPLSRKH 59 usage_00291.pdb 1 PVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGATSAGPHFNPLSRKH 59 usage_00556.pdb 1 ---GIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGCTSAGPHFNPLSRKH 56 usage_00677.pdb 1 ---GIINFEQKESNGPVKVWGSIKGLTEGLFGFHV-HG-A-------------------- 35 usage_00678.pdb 1 PVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHV-HG-A-------------------- 38 usage_00858.pdb 1 ---GIINFEQKESNGPVKVWGSIKGLTEGLHGFHV-HEFGDNTAGCTSAGPHFNPLSRKH 56 GiinFeQke ngpvkvwGsIkGLteGL GfHV h usage_00141.pdb 59 GGPQ-DSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 114 usage_00218.pdb 57 -GGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 115 usage_00267.pdb 60 GGPK-DEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 118 usage_00268.pdb 57 GGPK-DEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 115 usage_00269.pdb 60 GGPK-DEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 118 usage_00291.pdb 60 GGPK-DEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 118 usage_00556.pdb 57 GGPK-DEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 115 usage_00677.pdb 36 ------G----GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKAG------ 79 usage_00678.pdb 39 ------G----GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKAG------ 82 usage_00858.pdb 57 GGPK-DEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 115 GDLGNVtADkDgvAdvsiEDsvisls iIGRtLvvhEka usage_00141.pdb 115 HPLSKITGNSGERLACGI----- 132 usage_00218.pdb 116 NEQSTKTGNAGSRLACGVI---- 134 usage_00267.pdb 119 NEESTKTGNAGSRLACGV----- 136 usage_00268.pdb 116 NEESTKTGNAGSRLACGV----- 133 usage_00269.pdb 119 NEESTKTGNAGSRLACGVIGIAQ 141 usage_00291.pdb 119 NEESTKTGNAGSRLAAGV----- 136 usage_00556.pdb 116 NEESTKTGNAGSRLACGV----- 133 usage_00677.pdb 80 -------AGAGSRLASGVIGIA- 94 usage_00678.pdb 83 -------AGAGSRLASGV----- 93 usage_00858.pdb 116 NEESTKTGNAGSRLACGV----- 133 aGsRLA Gv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################