################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:48 2021 # Report_file: c_0839_22.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00081.pdb # 2: usage_00082.pdb # 3: usage_00083.pdb # 4: usage_00098.pdb # 5: usage_00099.pdb # 6: usage_00115.pdb # 7: usage_00328.pdb # 8: usage_00424.pdb # 9: usage_00425.pdb # # Length: 94 # Identity: 10/ 94 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 94 ( 25.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 94 ( 60.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 ---------------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 33 usage_00082.pdb 1 ---------------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 33 usage_00083.pdb 1 ---------------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 33 usage_00098.pdb 1 SEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 60 usage_00099.pdb 1 ---------------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 33 usage_00115.pdb 1 ---------------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKE 33 usage_00328.pdb 1 ----------------------------FASFSAFTKDVGEKTQVIGDDILVTNILRIEK 32 usage_00424.pdb 1 ---------------------------DWEGHKLLTERLGKKVQLVGDDLFVTNTKKLSE 33 usage_00425.pdb 1 ----------------------------WEGHKLLTERLGKKVQLVGDDLFVTNTKKLSE 32 w g T lG K QlvGDDlfVTNtk l e usage_00081.pdb 34 GIEKGIANSILIKFNQIGSLTETLAAIKMAKDAG 67 usage_00082.pdb 34 GIEKGIANSILIKFNQIGSLTETLAAIKMAKDAG 67 usage_00083.pdb 34 GIEKGIANSILIKFNQIGSLTETLAAIKMAKDAG 67 usage_00098.pdb 61 GIEKG----------------------------- 65 usage_00099.pdb 34 GIEKGIANSILIKFNQIGSLTETLAAIKMAKDAG 67 usage_00115.pdb 34 GIEKGIANSILIKFNQIGSLTETLAAIKMAKDAG 67 usage_00328.pdb 33 ALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSG 66 usage_00424.pdb 34 GIKNGVGNSILIKVNQIGTLTETFDAIEMAKRAG 67 usage_00425.pdb 33 GIKNGVGNSILIKVNQIGTLTETFDAIEMAKRAG 66 gi g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################