################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:33 2021 # Report_file: c_1488_171.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_02167.pdb # 2: usage_02168.pdb # 3: usage_02169.pdb # 4: usage_02170.pdb # 5: usage_02171.pdb # 6: usage_03187.pdb # 7: usage_04940.pdb # 8: usage_04941.pdb # 9: usage_04942.pdb # 10: usage_04943.pdb # 11: usage_04944.pdb # 12: usage_06835.pdb # 13: usage_06836.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 40 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 40 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02167.pdb 1 ------RRIEDHISFLEKFINDVNTLTAKLLKD-LQTEYG 33 usage_02168.pdb 1 -----MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEYG 35 usage_02169.pdb 1 -----MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEY- 34 usage_02170.pdb 1 -------RRIEDHISFLEKFINDVNTLTAKLLKDLQTEYG 33 usage_02171.pdb 1 -----MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEY- 34 usage_03187.pdb 1 VKKVY---DPRSYLKKAEASMSQRVVQACNDLH------- 30 usage_04940.pdb 1 ---------IEDHISFLEKFINDVNTLTAKLLKDLQTEYG 31 usage_04941.pdb 1 -------RRIEDHISFLEKFINDVNTLTAKLLKDLQTEYG 33 usage_04942.pdb 1 ----------EDHISFLEKFINDVNTLTAKLLKDLQTEY- 29 usage_04943.pdb 1 ---------IEDHISFLEKFINDVNTLTAKLLKDLQTEYG 31 usage_04944.pdb 1 -----MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEYG 35 usage_06835.pdb 1 --------RIEDHISFLEKFINDVNTLTAKLLKDLQTEY- 31 usage_06836.pdb 1 --------RIEDHISFLEKFINDVNTLTAKLLKDLQTEYG 32 e ll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################