################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:51:57 2021 # Report_file: c_0141_38.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00134.pdb # 2: usage_00135.pdb # 3: usage_00136.pdb # 4: usage_00137.pdb # 5: usage_00138.pdb # 6: usage_00347.pdb # 7: usage_00348.pdb # 8: usage_00349.pdb # # Length: 176 # Identity: 139/176 ( 79.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 139/176 ( 79.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/176 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYE 60 usage_00135.pdb 1 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYE 60 usage_00136.pdb 1 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYE 60 usage_00137.pdb 1 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYE 60 usage_00138.pdb 1 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYE 60 usage_00347.pdb 1 -EFTQAILEAAEE-KSPVILALSEGA-KYGGRALTR-VVALAQEARVPVAVHLDHGSSYE 56 usage_00348.pdb 1 -EFTQAILEAAEE-KSPVILALSEGA-KYGGRALTR-VVALAQEARVPVAVHLDHGSSYE 56 usage_00349.pdb 1 -EFTQAILEAAEE-KSPVILALSEGA-KYGGRALTR-VVALAQEARVPVAVHLDHGSSYE 56 EF QA LEAAEE SPVILALSEGA KYGGRALT V LA EARVPVAVHLDHGSSYE usage_00134.pdb 61 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD 120 usage_00135.pdb 61 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD 120 usage_00136.pdb 61 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD 120 usage_00137.pdb 61 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD 120 usage_00138.pdb 61 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD 120 usage_00347.pdb 57 SVLKALREGFTSV-IDKSHEDFETNVRETKRVVEAAHAVGVTVEAELG-RLA----GI-- 108 usage_00348.pdb 57 SVLKALREGFTSV-IDKSHEDFETNVRETKRVVEAAHAVGVTVEAELG-RLA----GIE- 109 usage_00349.pdb 57 SVLKALREGFTSV-IDKSHEDFETNVRETKRVVEAAHAVGVTVEAELG-RL--------- 105 SVL ALR GFTSV IDKSHEDFETNVRET RVVEAAHAVGVTVEAELG usage_00134.pdb 121 EKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP 176 usage_00135.pdb 121 EKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV- 175 usage_00136.pdb 121 EKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP 176 usage_00137.pdb 121 EKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP 176 usage_00138.pdb 121 EKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV- 175 usage_00347.pdb 109 EKDALLTNPEEARIF-ERTGADYLAVAIGTSHGAYKGKGRPFIDHPRLARIAKLVP 163 usage_00348.pdb 110 EKDALLTNPEEARIF-ERTGADYLAVAIGTSHGAYKGKGRPFIDHPRLARIAKLVP 164 usage_00349.pdb 106 -----LTNPEEARIF-ERTGADYLAVAIGTSHGAYKGKGRPFIDHPRLARIAKLVP 155 LTNPEEARIF ERTGADYLAVAIGTSHGAYKGKGRPFIDH RL RIA LV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################