################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:59 2021 # Report_file: c_0083_35.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00131.pdb # 2: usage_00219.pdb # 3: usage_00220.pdb # # Length: 235 # Identity: 9/235 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/235 ( 63.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 87/235 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 ILV------------FIELVNYYTKFLLEIRNQD-KYWALRHVKKILPVFAQLFEDTE-N 46 usage_00219.pdb 1 ---SAEDLVKALRSEIDPLKVAACRVIENS---QPKGLFA--TSNIIDILLDILFDEKVE 52 usage_00220.pdb 1 ---SAEDLVKALRSEIDPLKVAACRVIENS---QPKGLFA--TSNIIDILLDILFDEKVE 52 idpLkvaacrviens q Kglfa tsnIidilldilfDek e usage_00131.pdb 47 YPDVRAFSTNCLLQLFAEVSRIEEDE-YSLFKT--DKDSLK-------IGSEAKLITEWL 96 usage_00219.pdb 53 NDK----LITAIEKALERLSTDEL--IRRRLFDNNL-PYLVSVKGRMETV-SFVRLIDFL 104 usage_00220.pdb 53 NDK----LITAIEKALERLSTDEL--IRRRLFDNNL-PYLVSVKGRMETV-SFVRLIDFL 104 ndk litaiekalerlStdEl rrrlfd l pyLv tv sfvrlidfL usage_00131.pdb 97 ELINPQYLVKY----HKDVVEN----YFHV-------SGYSI-GLRNLSA------DEEC 134 usage_00219.pdb 105 TIE--FQFIS-GPEFKDIIFCFTKEEILK-SVEDILVFIELVNYYTKFLLEIRNQDKYWA 160 usage_00220.pdb 105 TIE--FQFIS-GPEFKDIIFCFTKEEILK-SVEDILVFIELVNYYTKFLLEIRNQDKYWA 160 tie fqfis kdiifcf ilk fielv yytkfll kywa usage_00131.pdb 135 FNAIRNKFSAEIVLRLP------YLEQ--QVVETLTRYEYTSKFLLNEPKVGSLI 181 usage_00219.pdb 161 LRHVKKILP--VFAQLFEDTENYPDV-RAFSTNC---LLQLFAEVSRI------- 202 usage_00220.pdb 161 LRHVKKILP--VFAQLFEDTENYPDV-RAFSTNC---LLQLFAEVSRI------- 202 lrhvkkilp vfaqLf pdv fstnc llqlfaevsri #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################