################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:02 2021 # Report_file: c_1084_119.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00213.pdb # 2: usage_00232.pdb # 3: usage_00406.pdb # 4: usage_00414.pdb # 5: usage_00462.pdb # 6: usage_01585.pdb # 7: usage_01903.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 62 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00213.pdb 1 PKSVTSAISLLAKAE----RPLIILGKGAAYSQ----------ADEQLREFIESAQIPFL 46 usage_00232.pdb 1 DQDLDILVKALNSAS----NPAIVLGPDVDAAN----------ANADCVMLAERLKAPVW 46 usage_00406.pdb 1 DQDLDILVKALNSAS----NPAIVLGPDVDAAN----------ANADCVMLAERLKAPVW 46 usage_00414.pdb 1 --DLDILVKALNSAS----NPAIVLGPDVDAAN----------ANADCVMLAERLKAPVW 44 usage_00462.pdb 1 -QDLDILVKALNSAS----NPAIVLGPDVDAAN----------ANADCVMLAERLKAPVW 45 usage_01585.pdb 1 -QAVTRLTQTLLAAE----RPLIYYGIGAR--K----------AGKELEQLSKTLKIPLM 43 usage_01903.pdb 1 -------NRPLFSLLSDLPPHHKVILVG-----HSIGGGSVTEALCKFT---D-KISMAI 44 L a p i g A p usage_00213.pdb 47 PM 48 usage_00232.pdb 47 V- 47 usage_00406.pdb 47 V- 47 usage_00414.pdb 45 V- 45 usage_00462.pdb 46 V- 46 usage_01585.pdb 44 ST 45 usage_01903.pdb 45 YL 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################