################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:36 2021 # Report_file: c_0302_44.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00082.pdb # 2: usage_00097.pdb # 3: usage_00247.pdb # # Length: 139 # Identity: 43/139 ( 30.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 125/139 ( 89.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/139 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 ---VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYF--LPDFPGLLMTV 55 usage_00097.pdb 1 ---VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYF--LPDFPGLLMTV 55 usage_00247.pdb 1 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTL 60 vVsIGVFDGVHiGHQKvlrtmkEiAffrkddsliyTisypPeyf lpdfPgllmTv usage_00082.pdb 56 ESRVEMLSRYAR--TVVLD-FFRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASG 109 usage_00097.pdb 56 ESRVEMLSRYAR--TVVLD-FFRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASG 109 usage_00247.pdb 61 AERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAG 120 esRvemlsryar tvVlD ffrikdltPEgfVEryLs gvSaVVVGrdFrFGkNAsG usage_00082.pdb 110 NASFLRKK-G--VEVYEIE 125 usage_00097.pdb 110 NASFLRKK-G--VEVYEIE 125 usage_00247.pdb 121 TADSLRQICQSRLTVDVID 139 nAsfLRkk g veVyeIe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################