################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:50:21 2021 # Report_file: c_0293_15.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00039.pdb # 2: usage_00053.pdb # 3: usage_00070.pdb # 4: usage_00107.pdb # 5: usage_00130.pdb # 6: usage_00131.pdb # 7: usage_00167.pdb # 8: usage_00216.pdb # 9: usage_00227.pdb # 10: usage_00243.pdb # 11: usage_00251.pdb # 12: usage_00260.pdb # 13: usage_00311.pdb # 14: usage_00312.pdb # 15: usage_00396.pdb # 16: usage_00448.pdb # 17: usage_00455.pdb # # Length: 130 # Identity: 102/130 ( 78.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/130 ( 79.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/130 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 ----HGTLL--KKIHCAVKSLN------EVSQFLTEGIIMKDFSHPNVLSLLGICLR--- 45 usage_00053.pdb 1 GCVYHGTL----KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 56 usage_00070.pdb 1 GCVYHGTLL---KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 57 usage_00107.pdb 1 GCVYHGTL-----IHCAVKSLNR---IGEVSQFLTEGIIMKDFSHPNVLSLLGICLR--- 49 usage_00130.pdb 1 ---GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR--- 54 usage_00131.pdb 1 ----HGTLL--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 54 usage_00167.pdb 1 ---GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 57 usage_00216.pdb 1 --HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 58 usage_00227.pdb 1 -----------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 49 usage_00243.pdb 1 -----------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 49 usage_00251.pdb 1 GCVYHGTL----KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR--S 54 usage_00260.pdb 1 GCVYHGTL----LIHCAVKSLN--------SQFLTEGIIMKDFSHPNVLSLLGICL---- 44 usage_00311.pdb 1 GCVYHGTL----KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR--G 54 usage_00312.pdb 1 GCVYHGTLL--DKIHCAVKSLNR---IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 55 usage_00396.pdb 1 ---GTLLDNDGKKIHCAVKSLNR---IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 54 usage_00448.pdb 1 -----------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR--S 47 usage_00455.pdb 1 ---GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 57 IHCAVKSLN SQFLTEGIIMKDFSHPNVLSLLGICL usage_00039.pdb 46 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 105 usage_00053.pdb 57 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 116 usage_00070.pdb 58 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 117 usage_00107.pdb 50 -PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 108 usage_00130.pdb 55 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 114 usage_00131.pdb 55 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 114 usage_00167.pdb 58 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 117 usage_00216.pdb 59 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 118 usage_00227.pdb 50 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 109 usage_00243.pdb 50 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 109 usage_00251.pdb 55 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 114 usage_00260.pdb 45 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 104 usage_00311.pdb 55 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 114 usage_00312.pdb 56 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 115 usage_00396.pdb 55 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 114 usage_00448.pdb 48 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 107 usage_00455.pdb 58 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 117 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKyLASKKFVHRDLAARNCM usage_00039.pdb 106 LDEKFTVKV- 114 usage_00053.pdb 117 LDEKFTVKV- 125 usage_00070.pdb 118 LDEKFTVKV- 126 usage_00107.pdb 109 LDEKFTVKVA 118 usage_00130.pdb 115 LDEKFTVKVA 124 usage_00131.pdb 115 LDEKFTVKVA 124 usage_00167.pdb 118 LDEKFTVKV- 126 usage_00216.pdb 119 LDEKFTVKVA 128 usage_00227.pdb 110 LDEKFTVKVA 119 usage_00243.pdb 110 LDEKFTVKV- 118 usage_00251.pdb 115 LDEKFTVKV- 123 usage_00260.pdb 105 LDEKFTVKV- 113 usage_00311.pdb 115 LDEKFTVKV- 123 usage_00312.pdb 116 LDEKFTVKV- 124 usage_00396.pdb 115 LDEKFTVKV- 123 usage_00448.pdb 108 LDEKFTVKV- 116 usage_00455.pdb 118 LDEKFTVKVA 127 LDEKFTVKV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################