################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:17 2021 # Report_file: c_1173_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00173.pdb # 2: usage_00356.pdb # 3: usage_00357.pdb # 4: usage_00358.pdb # 5: usage_00550.pdb # 6: usage_00551.pdb # 7: usage_00713.pdb # 8: usage_01253.pdb # 9: usage_01717.pdb # # Length: 37 # Identity: 0/ 37 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 37 ( 13.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 37 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00173.pdb 1 -SVELSGPP--RLVATNFV-GG--PKNVPIRFTKA-- 29 usage_00356.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_00357.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_00358.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_00550.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_00551.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_00713.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 usage_01253.pdb 1 VFARQGDK--GSVSV----GDKHFRTQAFKVRL-VN- 29 usage_01717.pdb 1 -SLIVVAGKYHIINNKT--NPK--IKSFTIKLL-F-N 30 s k k i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################