################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:31 2021 # Report_file: c_1484_220.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00061.pdb # 2: usage_00213.pdb # 3: usage_00215.pdb # 4: usage_01120.pdb # 5: usage_01121.pdb # 6: usage_01123.pdb # 7: usage_01322.pdb # 8: usage_01562.pdb # 9: usage_01563.pdb # 10: usage_01564.pdb # 11: usage_01565.pdb # 12: usage_01570.pdb # 13: usage_01571.pdb # 14: usage_02305.pdb # 15: usage_02414.pdb # 16: usage_03346.pdb # 17: usage_04817.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 46 ( 45.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 46 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKFNH- 39 usage_00213.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKF--- 37 usage_00215.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSY----- 35 usage_01120.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYK---- 36 usage_01121.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKF--- 37 usage_01123.pdb 1 RPEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKFN-- 39 usage_01322.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01562.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01563.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01564.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01565.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01570.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_01571.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKFNH- 39 usage_02305.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKF--- 37 usage_02414.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSS------ 34 usage_03346.pdb 1 S-TTDLDRLSDSTI------------DVTTRIRLYVQQVYDYSLAN 33 usage_04817.pdb 1 -PEH-ARERL----QDDSVETVTSIEQAKVEEKIQEVFSSYKFNH- 39 eh arerl qakveekiqevfss #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################