################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:31 2021 # Report_file: c_0328_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00465.pdb # 2: usage_00466.pdb # 3: usage_00467.pdb # 4: usage_00468.pdb # 5: usage_00469.pdb # # Length: 279 # Identity: 26/279 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/279 ( 38.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 172/279 ( 61.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00465.pdb 1 --RKKAFDERKICYNLIHQVLDKLESDFAGEPELVDGRPTLAATKRMEAYNVVNDSSDEV 58 usage_00466.pdb 1 ---KKAFDERKICYNLIHQVLDKLESDFAGEPEL----PTLAATKRMEAYNVVNDSSDEV 53 usage_00467.pdb 1 DSRKKAFDERKICYNLIHQVLDKLESDFAG---------TLAATKRMEAYNVVNDSSDEV 51 usage_00468.pdb 1 ----HVITY--------------------------------------------------- 5 usage_00469.pdb 1 DSRKKAFDERKICYNLIHQVLDKLESDF------------LAATKRMEAYNVVNDSSDEV 48 kafde usage_00465.pdb 59 FHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQV 118 usage_00466.pdb 54 FHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQV 113 usage_00467.pdb 52 FHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQV 111 usage_00468.pdb 6 -------------LQRLAET-----DFR--------HAELLCRFYTTRS---RFFEAAQV 36 usage_00469.pdb 49 FHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQV 108 wtdrils vit dfrhaellcrfyt RFFEAAQV usage_00465.pdb 119 QTNLAKSDLNI---SLKDRIILLSRAKGNASVNTIGISRQQQQQLNHEASELLEIAHIQD 175 usage_00466.pdb 114 QTNLAKSDLNI---SLKDRIILLSRAKGNASVNTIGISRQQQQQLNHEASELLEIAHIQD 170 usage_00467.pdb 112 QTNLAKSDLNI---SLKDRIILLSRAKGNASVNTIGISRQQQQQLNHEASELLEIAHIQD 168 usage_00468.pdb 37 QTNLAKSDLNISLKDRIILLSRAKGNASVN---TIGI----SRQQQQQLNHEASELLEIA 89 usage_00469.pdb 109 QTNLAKSDLNI---SLKDRIILLSRAKGNASVNTIGISRQQQQQLNHEASELLEIAHIQD 165 QTNLAKSDLNI slkdriillsrakgna TIGI qqQlnheaselleiahiqd usage_00465.pdb 176 DLLERLVADPRI----------PEERKAEIEEFL-------------------------- 199 usage_00466.pdb 171 DLLERLVADPRI----------PEERKAEIEEF--------------------------- 193 usage_00467.pdb 169 DLLERLVADPRI----------PEERKAEIEEF--------------------------- 191 usage_00468.pdb 90 HIQDDLLERL--VADPRIPEERKAEIEEFLDGP-IRTLTDLFNDYADQANYYDLCLLIFH 146 usage_00469.pdb 166 DLLERLVADPRI----------PEERKAEIEEFL-------------------------- 189 dllerLvadp peErkaeieef usage_00465.pdb --------------------------------------- usage_00466.pdb --------------------------------------- usage_00467.pdb --------------------------------------- usage_00468.pdb 147 AADFHNPRTILDTWNNLINQSHFEAEQRREYWEIVQAG- 184 usage_00469.pdb 190 --------------------------------------D 190 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################