################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:33 2021 # Report_file: c_0023_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # # Length: 308 # Identity: 112/308 ( 36.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 112/308 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/308 ( 3.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTA 59 usage_00002.pdb 1 HPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTA 60 usage_00009.pdb 1 -PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLA 59 usage_00010.pdb 1 -PALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLA 59 P AL Q TS F K T E VL MN G EA ETA K A usage_00001.pdb 60 RRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLE 119 usage_00002.pdb 61 RRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLE 120 usage_00009.pdb 60 RHYAV-RHSP-FK-TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLH 116 usage_00010.pdb 60 RHYACVRHSP-FK-TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLH 117 R A II FHGR VS Y GFGP II P DL usage_00001.pdb 120 ALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK 179 usage_00002.pdb 121 ALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK 180 usage_00009.pdb 117 AVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD 176 usage_00010.pdb 118 AVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD 177 A KA T A EPIQGE G FLK C L V DE Q G GRTG usage_00001.pdb 180 VFACDWDNVTPDMYILGALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIA 239 usage_00002.pdb 181 VFACDWDNVTPDMYILGALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIA 240 usage_00009.pdb 177 LFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGA 236 usage_00010.pdb 178 LFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGA 237 FA VTPD GG FP S I F GSHGST GGNPLACAV A usage_00001.pdb 240 ALEVLEEEKLTERSLQLGEKLVGQLKEI-D-NPMITEVRGKGLFIGIEL-N--EP-ARPY 293 usage_00002.pdb 241 ALEVLEEEKLTERSLQLGEKLVGQLKEI-D-NPMITEVRGKGLFIGIEL-N--EP-ARPY 294 usage_00009.pdb 237 TFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDF 296 usage_00010.pdb 238 TFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDF 297 V L I RG GL IG EL AR usage_00001.pdb 294 CEQLKAAG 301 usage_00002.pdb 295 CEQLKAAG 302 usage_00009.pdb 297 LYAGAEAG 304 usage_00010.pdb 298 LYAGAEAG 305 AG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################