################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:43:10 2021 # Report_file: c_0147_5.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00060.pdb # 5: usage_00061.pdb # 6: usage_00129.pdb # 7: usage_00130.pdb # 8: usage_00211.pdb # 9: usage_00212.pdb # 10: usage_00213.pdb # 11: usage_00242.pdb # 12: usage_00243.pdb # 13: usage_00247.pdb # 14: usage_00276.pdb # 15: usage_00317.pdb # 16: usage_00318.pdb # 17: usage_00332.pdb # 18: usage_00333.pdb # 19: usage_00376.pdb # 20: usage_00377.pdb # 21: usage_00631.pdb # 22: usage_00632.pdb # # Length: 131 # Identity: 78/131 ( 59.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/131 ( 62.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/131 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00057.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00058.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00060.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 usage_00061.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00129.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00130.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00211.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00212.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00213.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00242.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKAS--SFSTYALSWVRQA---GLEWMGGVIPLLTITNY 55 usage_00243.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 usage_00247.pdb 1 --QLVQSGAEVKKPGSSVKVSCKAS-------AISWVRQAPGQGLEWMGGIIPIFGTANY 51 usage_00276.pdb 1 QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANY 60 usage_00317.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00318.pdb 1 --QLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 58 usage_00332.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKAS--TFSSYAISWVRQAPGQGLEWMGGIIPIFGTANY 57 usage_00333.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 usage_00376.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 usage_00377.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 usage_00631.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 60 usage_00632.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNY 59 QLVQSGAEVK PGSSV VSCKAS A SWVRQA GLEWMGG IP NY usage_00056.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT--------GKPI--GAFA 110 usage_00057.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00058.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00060.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 114 usage_00061.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT-------LGKPI--GAFA 111 usage_00129.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WL---GKPI--GAFA 113 usage_00130.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WL---GKPI--GAFA 113 usage_00211.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00212.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00213.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00242.pdb 56 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTGWGWL---GKPI--GAFA 110 usage_00243.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTGWGW-----LGKPIGAFA 114 usage_00247.pdb 52 AQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREG----GWL---GKPI--GAFA 102 usage_00276.pdb 61 AQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGTTG--WGW--GKPI--GAFA 114 usage_00317.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 115 usage_00318.pdb 59 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WGWL-GKPI--GAFA 113 usage_00332.pdb 58 AQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGTTG--GWL--GKPI--GAFQ 111 usage_00333.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--SG---GKPI--GAFA 112 usage_00376.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT--------GKPI--GAFA 109 usage_00377.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--AGWL-GKPI--GAFA 114 usage_00631.pdb 61 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG--WG---GKPI--GAFA 113 usage_00632.pdb 60 APRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT---------KPI--GAFA 108 A FQGR TITAD STSTAY EL SLR EDTAVYYCAREG kpi GAFa usage_00056.pdb 111 HWGQGTLVTVS 121 usage_00057.pdb 116 HWGQGTLVTVS 126 usage_00058.pdb 116 HWGQ------- 119 usage_00060.pdb 115 HWGQGTLVTVS 125 usage_00061.pdb 112 HWGQGTLVTVS 122 usage_00129.pdb 114 HWGQGTLVTVS 124 usage_00130.pdb 114 HWGQ------- 117 usage_00211.pdb 116 HWGQGTLVTVS 126 usage_00212.pdb 116 HWGQGTLVTVS 126 usage_00213.pdb 116 HWGQGTLVTVS 126 usage_00242.pdb 111 HWGQGTLVTVS 121 usage_00243.pdb 115 HWGQGTLVTVS 125 usage_00247.pdb 103 YWGQGTLVTVS 113 usage_00276.pdb 115 YWGQGTLVTVS 125 usage_00317.pdb 116 HWGQGTLVTVS 126 usage_00318.pdb 114 HWGQGTLVTVS 124 usage_00332.pdb 112 HWGQGTLVTVS 122 usage_00333.pdb 113 HWGQGTLVTVS 123 usage_00376.pdb 110 HWGQ------- 113 usage_00377.pdb 115 HWGQ------- 118 usage_00631.pdb 114 HWGQ------- 117 usage_00632.pdb 109 HWGQGTLVTVS 119 WGQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################