################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:10 2021 # Report_file: c_1459_134.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00137.pdb # 2: usage_01617.pdb # 3: usage_01899.pdb # 4: usage_02136.pdb # 5: usage_02271.pdb # 6: usage_02501.pdb # 7: usage_02532.pdb # 8: usage_02541.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 49 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 49 ( 81.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00137.pdb 1 KTVSVAVKCLK-P--DVLSQ-----PEAMDDFIR-------EVNAMH-- 32 usage_01617.pdb 1 -----NAILVP-T--WYSGT-----SKAMEQIYIGEGRALD-------- 28 usage_01899.pdb 1 VKIPVAIKELR-E--A--TS-----PKANKEILD-------EAYVMAS- 31 usage_02136.pdb 1 -----AIKVLR-E--N--TS-----PKANKEILD-------EAYVM--- 24 usage_02271.pdb 1 --------------------VAIKEKEILDEAYV-------MASV---- 18 usage_02501.pdb 1 VKIPVAIKELR-E--A--TS-----PKANKEILD-------EAYVMA-- 30 usage_02532.pdb 1 AETRVAVKTVN-E--S--AS-----LRERIEFLN-------EASVMKGF 32 usage_02541.pdb 1 ---AYLMAPLKKIPEV--TN-----WETFENDLR-------WAKQNG-- 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################