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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:48:28 2021
# Report_file: c_0413_2.html
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#====================================
# Aligned_structures: 8
#   1: usage_00029.pdb
#   2: usage_00030.pdb
#   3: usage_00031.pdb
#   4: usage_00032.pdb
#   5: usage_00100.pdb
#   6: usage_00101.pdb
#   7: usage_00102.pdb
#   8: usage_00103.pdb
#
# Length:         63
# Identity:       18/ 63 ( 28.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     25/ 63 ( 39.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 63 ( 17.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00029.pdb         1  -LEIRDLWASIDGE-TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPE-----YT   53
usage_00030.pdb         1  MLSIKDLHVSVEDK-AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGRED-----YE   54
usage_00031.pdb         1  MLSIKDLHVSVEDK-AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGRED-----YE   54
usage_00032.pdb         1  MLSIKDLHVSVEDK-AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGRED-----YE   54
usage_00100.pdb         1  MLSIKDLHVSVEDK-AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGRED-----YE   54
usage_00101.pdb         1  MLSIKDLHVSVEDK-AILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGRED-----YE   54
usage_00102.pdb         1  -LTAHHLDVA---HGTILRDLSLSIEPGRVTALLGRNGAGKSTLLKTFAGELTGSVAGVR   56
usage_00103.pdb         1  -LTAHHLDVA---G-TILRDLSLSIEPGRVTALLGRNGAGKSTLLKTFAGELTGSVGVRV   55
                            L    L v       ILr lsL   pG V A  G NG GKSTL  t AG          

usage_00029.pdb        54  VER   56
usage_00030.pdb        55  VTG   57
usage_00031.pdb        55  VTG   57
usage_00032.pdb        55  VTG   57
usage_00100.pdb        55  VTG   57
usage_00101.pdb        55  VTG   57
usage_00102.pdb        57  VTG   59
usage_00103.pdb        56  TG-   57
                           v  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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