################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:13:56 2021 # Report_file: c_0283_10.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00033.pdb # 2: usage_00063.pdb # 3: usage_00064.pdb # 4: usage_00091.pdb # 5: usage_00092.pdb # 6: usage_00093.pdb # 7: usage_00158.pdb # 8: usage_00190.pdb # 9: usage_00191.pdb # 10: usage_00281.pdb # 11: usage_00324.pdb # 12: usage_00325.pdb # 13: usage_00326.pdb # 14: usage_00341.pdb # 15: usage_00342.pdb # 16: usage_00346.pdb # 17: usage_00354.pdb # 18: usage_00355.pdb # 19: usage_00372.pdb # # Length: 104 # Identity: 68/104 ( 65.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/104 ( 67.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/104 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -----APSVYPLAPV---------SS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 45 usage_00063.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00064.pdb 1 ---TTAPSVYPLAPV--------GSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 48 usage_00091.pdb 1 ---TTAPSVYPLAPV-------TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 49 usage_00092.pdb 1 ---TTAPSVYPLAPV-------TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 49 usage_00093.pdb 1 ---TTAPSVYPLAPV-------TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 49 usage_00158.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00190.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00191.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00281.pdb 1 ---TTAPSVYPLAPVC--------SS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 48 usage_00324.pdb 1 ---TTAPPVYPLAPVCGDT---TGSS-VTLGCLVKGYFPESVTLLWNSGSLSSGVHTFPA 53 usage_00325.pdb 1 ---TTAPSVYPLAP-----------S-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 45 usage_00326.pdb 1 --KTTAPSVYPLAP------------VVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 46 usage_00341.pdb 1 --TTTAPSVYPLAPAC-DSTTSTTDT-VTLGCLVKGYFPEPVTVSWNSGALTSGVHTFPS 56 usage_00342.pdb 1 -----APSVYPLAPAC-DSTTSTTDT-VTLGCLVKGYFPEPVTVSWNSGALTSGVHTFPS 53 usage_00346.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00354.pdb 1 ---TTAPSVYPLAPVCGDT---TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 53 usage_00355.pdb 1 SAKTTAPSVYPLAPVC-------GSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 52 usage_00372.pdb 1 ---TTAPSVYPLAPVC------TGSS-VTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 50 APsVYPLAP VTLGCLVKGYFPEpVT WNSG L SGVHTFP usage_00033.pdb 46 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 89 usage_00063.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 97 usage_00064.pdb 49 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 92 usage_00091.pdb 50 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 93 usage_00092.pdb 50 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 93 usage_00093.pdb 50 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 93 usage_00158.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 97 usage_00190.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 97 usage_00191.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 97 usage_00281.pdb 49 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKK--- 89 usage_00324.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVP 97 usage_00325.pdb 46 LLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKK--- 86 usage_00326.pdb 47 LLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKK--- 87 usage_00341.pdb 57 VLHSGLYSLSSSVTVPSSTWPKQPITCNVAHPASSTKVDKKIEP 100 usage_00342.pdb 54 VLHSGLYSLSSSVTVPSSTWPKQPITCNVAHPASSTKVDKK--- 94 usage_00346.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVP 97 usage_00354.pdb 54 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 97 usage_00355.pdb 53 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 96 usage_00372.pdb 51 VLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP 94 L S LY LSSSVTV S TWP Q ITCNVAHPASSTKVDKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################