################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:17 2021 # Report_file: c_1203_34.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00345.pdb # 2: usage_00346.pdb # 3: usage_00347.pdb # 4: usage_00348.pdb # 5: usage_00486.pdb # 6: usage_00561.pdb # 7: usage_00888.pdb # 8: usage_00889.pdb # 9: usage_00890.pdb # 10: usage_00891.pdb # 11: usage_01447.pdb # 12: usage_01520.pdb # # Length: 34 # Identity: 2/ 34 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 34 ( 70.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 34 ( 26.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00345.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARV-- 31 usage_00346.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARV-- 31 usage_00347.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARV-- 31 usage_00348.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARV-- 31 usage_00486.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARVIL 33 usage_00561.pdb 1 -DNIKD-TKSDIIFFQ--RSVPGH--DNKMQFES 28 usage_00888.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNAAV-- 31 usage_00889.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNAAVIL 33 usage_00890.pdb 1 -LNYEDGVLDPSSIVPLIDGGTE-GFKGNAQVIL 32 usage_00891.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNAQVIL 33 usage_01447.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARV-- 31 usage_01520.pdb 1 LLNYEDGVLDPSSIVPLIDGGTE-GFKGNARVIL 33 lNyeD vldpssivp dggte kgna v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################