################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:07 2021 # Report_file: c_1228_64.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00109.pdb # 2: usage_00118.pdb # 3: usage_00119.pdb # 4: usage_00120.pdb # 5: usage_00121.pdb # 6: usage_00220.pdb # 7: usage_00320.pdb # 8: usage_00321.pdb # 9: usage_00322.pdb # 10: usage_00323.pdb # 11: usage_00330.pdb # 12: usage_00515.pdb # 13: usage_00516.pdb # 14: usage_00517.pdb # 15: usage_00573.pdb # 16: usage_00574.pdb # 17: usage_00650.pdb # 18: usage_00651.pdb # 19: usage_00766.pdb # 20: usage_00825.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 65 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 65 ( 67.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 NTIMFDDIRRNFLMN--PK-------SGLKIRPF-RQAHLNRGT--D-TELLKLSDYLRK 47 usage_00118.pdb 1 KTLILDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-A--D-TELLNLIPIFEE 43 usage_00119.pdb 1 -TLILDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-A--D-TELLNLIPIFEE 42 usage_00120.pdb 1 KTLILDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-A--D-TELLNLIPIFEE 43 usage_00121.pdb 1 -TLILDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-A--D-TELLNLIPIFEE 42 usage_00220.pdb 1 RVLILDNSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00320.pdb 1 -VIIVDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-T--D-TELLDLIPFFEG 42 usage_00321.pdb 1 -VIIVDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-T--D-TELLDLIPFFEG 42 usage_00322.pdb 1 -VIIVDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-T--D-TELLDLIPFFEG 42 usage_00323.pdb 1 -VIIVDNSPASYIFH--PE-------NAVPVQSW-F-D--DM-T--D-TELLDLIPFFEG 42 usage_00330.pdb 1 EVLVIDHHASNQ---LFGT-------ANYIDPS--A-D--ST-T--LVAELLDAWG---- 38 usage_00515.pdb 1 RVLILANSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00516.pdb 1 -VLILANSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 42 usage_00517.pdb 1 -------------------AIVITGIPVIPLTSDWF-E--RA-SPRIILAAQQLCNALSQ 37 usage_00573.pdb 1 -VIIIDTDPNSYKLQ--PE-------NAIPMEPW-N-G--EA-D--D-KLVRLIPFLEYL 42 usage_00574.pdb 1 -VIIIDTDPNSYKLQ--PE-------NAIPMEPW-N-G--EA-D--D-KLVRLIPFLEYL 42 usage_00650.pdb 1 RVLILDNSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00651.pdb 1 RVLILDNSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00766.pdb 1 RVLILDNSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00825.pdb 1 RVLILANSPASYVFH--PD-------NAVPVASW-F-D--NM-S--D-TELHDLLPFFEQ 43 usage_00109.pdb 48 IAHHC 52 usage_00118.pdb 44 L---- 44 usage_00119.pdb 43 LS--- 44 usage_00120.pdb 44 L---- 44 usage_00121.pdb 43 L---- 43 usage_00220.pdb 44 LSRV- 47 usage_00320.pdb 43 LSR-- 45 usage_00321.pdb 43 LSR-- 45 usage_00322.pdb 43 LSRED 47 usage_00323.pdb 43 LSRE- 46 usage_00330.pdb ----- usage_00515.pdb 44 LSRV- 47 usage_00516.pdb 43 LSRV- 46 usage_00517.pdb 38 V---- 38 usage_00573.pdb 43 A---- 43 usage_00574.pdb 43 A---- 43 usage_00650.pdb 44 LS--- 45 usage_00651.pdb 44 LS--- 45 usage_00766.pdb 44 LSRV- 47 usage_00825.pdb 44 LSRV- 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################