################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:17 2021 # Report_file: c_1209_116.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00359.pdb # 2: usage_00360.pdb # 3: usage_00361.pdb # 4: usage_00362.pdb # 5: usage_00670.pdb # 6: usage_01070.pdb # 7: usage_01071.pdb # 8: usage_01086.pdb # 9: usage_01210.pdb # 10: usage_01221.pdb # 11: usage_01513.pdb # 12: usage_01514.pdb # 13: usage_01515.pdb # 14: usage_01516.pdb # # Length: 35 # Identity: 4/ 35 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 35 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 35 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00359.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDA------- 28 usage_00360.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDALKN---- 31 usage_00361.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDA------- 28 usage_00362.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDAL------ 29 usage_00670.pdb 1 DFSVRDGNLITGQNPQSSRSTAEKVVAALEERE-- 33 usage_01070.pdb 1 DYSITDGKLVTGVNANSSYSTTIRAINAL------ 29 usage_01071.pdb 1 DYSITDGKLVTGVNANSSYSTTIRAINALYS---- 31 usage_01086.pdb 1 SYVKSDSKIITAQNPQSATDFAKAIKQSL------ 29 usage_01210.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIVALK----- 30 usage_01221.pdb 1 DFCKVDGRIVTGANPQSATNTARDTIKVYEGIVNE 35 usage_01513.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDA------- 28 usage_01514.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDAL------ 29 usage_01515.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSID-------- 27 usage_01516.pdb 1 DYSITDGRLVTGVNPASAHSTAVRSIDAL------ 29 d Dg Tg N S t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################