################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:10:02 2021 # Report_file: c_0468_2.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00011.pdb # 5: usage_00014.pdb # 6: usage_00017.pdb # 7: usage_00018.pdb # 8: usage_00026.pdb # 9: usage_00029.pdb # 10: usage_00048.pdb # 11: usage_00051.pdb # 12: usage_00063.pdb # 13: usage_00067.pdb # 14: usage_00068.pdb # 15: usage_00081.pdb # 16: usage_00082.pdb # 17: usage_00083.pdb # 18: usage_00090.pdb # 19: usage_00091.pdb # 20: usage_00095.pdb # 21: usage_00096.pdb # 22: usage_00097.pdb # 23: usage_00098.pdb # 24: usage_00105.pdb # 25: usage_00117.pdb # # Length: 107 # Identity: 46/107 ( 43.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/107 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/107 ( 17.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ------VVVTTIMESPYVMYKKNHE--MFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP 52 usage_00007.pdb 1 ------VVVTTIMESPYVMYKKNHE--MFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP 52 usage_00008.pdb 1 ------VVVTTIMESPYVMYKKNHE--MFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP 52 usage_00011.pdb 1 ----KTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 54 usage_00014.pdb 1 ----KTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 54 usage_00017.pdb 1 -----TVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 53 usage_00018.pdb 1 -----TVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 53 usage_00026.pdb 1 -----TVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 53 usage_00029.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00048.pdb 1 ------LIVTTILEEPYVMYRKS--DKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVP 52 usage_00051.pdb 1 ----RSLIVTTILEEPYVLFKKS--DKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVE 54 usage_00063.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00067.pdb 1 ------LIVTTILEEPYVLFKKS--DKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVE 52 usage_00068.pdb 1 -----SLIVTTILEEPYVLFK-------LYGNDRFEGYCIDLLRELSTILGFTYEIRLVE 48 usage_00081.pdb 1 ----KTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 54 usage_00082.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00083.pdb 1 --EQKTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 56 usage_00090.pdb 1 ----RTIVVTTILESPYVMYKKNHE--QLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVG 54 usage_00091.pdb 1 ------IVVTTILESPYVMYKKNHE--QLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVG 52 usage_00095.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00096.pdb 1 GLEQKTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 58 usage_00097.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00098.pdb 1 ----KTVVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 54 usage_00105.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 usage_00117.pdb 1 ------VVVTTILESPYVMMKKNHE--MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVG 52 VTTI E PYV k GN EGYC DL E Y V usage_00006.pdb 53 DGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSK 99 usage_00007.pdb 53 DGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSK 99 usage_00008.pdb 53 DGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSK 99 usage_00011.pdb 55 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 101 usage_00014.pdb 55 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 101 usage_00017.pdb 54 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 100 usage_00018.pdb 54 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 100 usage_00026.pdb 54 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 100 usage_00029.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00048.pdb 53 DGKYGAQ------WNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 93 usage_00051.pdb 55 DGKYGAQD---GQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSK 98 usage_00063.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00067.pdb 53 DGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSA 99 usage_00068.pdb 49 DGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSA 95 usage_00081.pdb 55 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 101 usage_00082.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00083.pdb 57 DGKYGARDADTKIWDGMVGELVYGKADIAIAPLTITLVREEVIDFSK 103 usage_00090.pdb 55 DGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSK 101 usage_00091.pdb 53 DGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSK 99 usage_00095.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00096.pdb 59 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 105 usage_00097.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00098.pdb 55 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 101 usage_00105.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 usage_00117.pdb 53 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSK 99 DGKYGA WnGMV EL A A APL IT VRE VIDFS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################