################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:43 2021 # Report_file: c_1112_12.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00009.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00083.pdb # 5: usage_00146.pdb # 6: usage_00165.pdb # 7: usage_00191.pdb # 8: usage_00192.pdb # 9: usage_00193.pdb # 10: usage_00258.pdb # 11: usage_00312.pdb # 12: usage_00332.pdb # # Length: 70 # Identity: 25/ 70 ( 35.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 70 ( 37.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 70 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 --LVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 58 usage_00013.pdb 1 -TMISILEAIEPDVIYAGYDSTLPDTTNRLLSSLNRLGGRQMISAVKWAKALPGFRNLHL 59 usage_00014.pdb 1 --MISILEAIEPDVIYAGYD--LPDTTNRLLSSLNRLGGRQMISAVKWAKALPGFRNLHL 56 usage_00083.pdb 1 NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSL 60 usage_00146.pdb 1 -KIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSL 59 usage_00165.pdb 1 -TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 59 usage_00191.pdb 1 -TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 59 usage_00192.pdb 1 ---VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 57 usage_00193.pdb 1 --LVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 58 usage_00258.pdb 1 -TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 59 usage_00312.pdb 1 ---VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 57 usage_00332.pdb 1 -TLISLLEVIEPEVLYSGYDSTLPDTSTRLMSTLNRLGGRQVVSAVKWAKALPGFRNLHL 59 S L EP Ya D PD L L R WAK PGF L L usage_00009.pdb 59 DDQMTLLQYS 68 usage_00013.pdb 60 DDQMTLLQYS 69 usage_00014.pdb 57 DDQMTLLQ-- 64 usage_00083.pdb 61 ADQMSLLQSA 70 usage_00146.pdb 60 ADQMSLLQSA 69 usage_00165.pdb 60 DDQMTLLQYS 69 usage_00191.pdb 60 DDQMTLLQYS 69 usage_00192.pdb 58 DDQMTLLQYS 67 usage_00193.pdb 59 DDQMTLLQYS 68 usage_00258.pdb 60 DDQMTLLQYS 69 usage_00312.pdb 58 DDQMTLLQYS 67 usage_00332.pdb 60 DDQMTLLQYS 69 DQM LLQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################