################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:10 2021 # Report_file: c_1124_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00358.pdb # 3: usage_00359.pdb # 4: usage_00360.pdb # 5: usage_00361.pdb # 6: usage_00362.pdb # 7: usage_00363.pdb # 8: usage_00364.pdb # 9: usage_00365.pdb # # Length: 88 # Identity: 0/ 88 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 88 ( 6.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 88 ( 56.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --RVGDLF---------------DKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDD 43 usage_00358.pdb 1 AEQKQQTRHALMSAARHLMESGRGFGSL--SLREVTRAAG--------IVPAGFYRHFS- 49 usage_00359.pdb 1 -EQKQQTRHALMSAARHLMESGRGFGSL--SLREVTRAAG--------IVPAGFYRHFS- 48 usage_00360.pdb 1 ---RA----RLITSARTLMA-ERGVDNV--GIAEITEGAN--------IGTGTFYNYFP- 41 usage_00361.pdb 1 --TRA----RLITSARTLMA-ERGVDNV--GIAEITEGAN--------IGTGTFYNYFP- 42 usage_00362.pdb 1 ---------RLITSARTLMA-ERGVDNV--GIAEITEGAN--------IGTGTFYNYFP- 39 usage_00363.pdb 1 -QKREQTRARLITSARTLA--ERGVDNV--GIAEITEGAN--------IGTGTFYNYFP- 46 usage_00364.pdb 1 AQKREQTRARLITSARTLA--ERGVDNV--GIAEITEGAN--------IGTGTFYNYFP- 47 usage_00365.pdb 1 --QNKERRQKILTCSLDLFI-EKGYYNT--SIRDIIALSE--------VGTGTFYNYFV- 46 g e fy f usage_00011.pdb 44 TMAVADILTSMV---------------- 55 usage_00358.pdb 50 DMDQLGLALVAE---------------- 61 usage_00359.pdb 49 DMDQLGLALVAEVDETFRATLRAVRRNE 76 usage_00360.pdb 42 DREQLLQAVAEDAFESVGIALDQV---- 65 usage_00361.pdb 43 DREQLLQAVAEDAFESVGIALDQV---- 66 usage_00362.pdb 40 DREQLLQAVAEDAFESVGIALDQV---- 63 usage_00363.pdb 47 DREQLLQAVAEDAFESVGIALDQV---- 70 usage_00364.pdb 48 DREQLLQAVAEDAFESVGIALDQV---- 71 usage_00365.pdb 47 DKEDILKNLLEDFAKQIISSISEY-YL- 72 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################