################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:03 2021 # Report_file: c_1155_79.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00104.pdb # 2: usage_00221.pdb # 3: usage_00246.pdb # 4: usage_00258.pdb # 5: usage_00279.pdb # 6: usage_00359.pdb # 7: usage_00361.pdb # 8: usage_00377.pdb # 9: usage_00485.pdb # 10: usage_00545.pdb # 11: usage_00703.pdb # 12: usage_00747.pdb # 13: usage_00749.pdb # # Length: 19 # Identity: 3/ 19 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 19 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 19 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 --EWYLQKPGQSPQLLIYK 17 usage_00221.pdb 1 SVSWYQQHPGKAPKVVIYD 19 usage_00246.pdb 1 --AWYQQKPGKAPKLLIYW 17 usage_00258.pdb 1 --AWYQQKPGQSPKLLVYF 17 usage_00279.pdb 1 --YWYLQKPGQSPQLLIYQ 17 usage_00359.pdb 1 ----YQQRRGKAPKLLIYD 15 usage_00361.pdb 1 --NWFQQKPGQPPKLLIYT 17 usage_00377.pdb 1 --EWYLQKPGQSPKLLIYK 17 usage_00485.pdb 1 --AWYQQKPGQPPKLLIYW 17 usage_00545.pdb 1 --SWYQQHAGKAPKVIIYE 17 usage_00703.pdb 1 --AWYQQKPGQSPKLLIYW 17 usage_00747.pdb 1 --SWYRQHPGEAPKAIIFD 17 usage_00749.pdb 1 --SWYQQHPGKAPKAIIFD 17 y Q G P i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################