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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:19:07 2021
# Report_file: c_1419_24.html
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#====================================
# Aligned_structures: 5
#   1: usage_00410.pdb
#   2: usage_00462.pdb
#   3: usage_00568.pdb
#   4: usage_00569.pdb
#   5: usage_00570.pdb
#
# Length:         66
# Identity:       17/ 66 ( 25.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/ 66 ( 56.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/ 66 ( 43.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00410.pdb         1  --------------------PGIALFYGGLIRGKNVL----S-LTQVTVTFALVCILWVV   35
usage_00462.pdb         1  --------------------PGIGLLYSGLSRK----KHALSLLWASMMASAVCIFQWFF   36
usage_00568.pdb         1  DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV   56
usage_00569.pdb         1  DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV   56
usage_00570.pdb         1  DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVL----SMLTQVTVTFALVCILWVV   56
                                               PGIaLfYgGLiRg        S LtqvtvtfAlvcilWvv

usage_00410.pdb        36  YGYSLA   41
usage_00462.pdb        37  WGYSLA   42
usage_00568.pdb        57  YGYSLA   62
usage_00569.pdb        57  YGYSLA   62
usage_00570.pdb        57  YGYSLA   62
                           yGYSLA


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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