################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:04 2021 # Report_file: c_1297_128.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00146.pdb # 2: usage_00663.pdb # 3: usage_01696.pdb # 4: usage_01785.pdb # 5: usage_01789.pdb # 6: usage_01790.pdb # 7: usage_01791.pdb # 8: usage_01792.pdb # 9: usage_01898.pdb # 10: usage_03164.pdb # 11: usage_03177.pdb # # Length: 40 # Identity: 5/ 40 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 40 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 40 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 -VWYNMLNQGLVKERRFSFWLNRN-VDEE--E-GGELVFG 35 usage_00663.pdb 1 PVWYKMIEQGLVSDPVFSFWLNRHV--------GGEIIFG 32 usage_01696.pdb 1 TVLENFVEENLI-APVFSIHHARF-Q---DGEHFGEIIFG 35 usage_01785.pdb 1 -VFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELML- 34 usage_01789.pdb 1 -VFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELMLG 35 usage_01790.pdb 1 PVFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELMLG 36 usage_01791.pdb 1 -VFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELMLG 35 usage_01792.pdb 1 PVFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELMLG 36 usage_01898.pdb 1 TVLENFVEENLI-APVFSIHHARF-Q---DGEHFGEIIFG 35 usage_03164.pdb 1 PVFDNLMQQKLVDQNIFSFYLSRD-PDAQ--P-GGELMLG 36 usage_03177.pdb 1 PVFDNMMNRHLVAQDLFSVYMDRN-G-------QESMLTL 32 V n L FS R ge #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################