################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:25:36 2021 # Report_file: c_1486_55.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00053.pdb # 2: usage_00079.pdb # 3: usage_00084.pdb # 4: usage_00086.pdb # 5: usage_00107.pdb # 6: usage_00556.pdb # 7: usage_00557.pdb # 8: usage_00995.pdb # 9: usage_00996.pdb # 10: usage_01098.pdb # 11: usage_01283.pdb # 12: usage_01284.pdb # 13: usage_01339.pdb # 14: usage_01346.pdb # 15: usage_01440.pdb # 16: usage_01450.pdb # 17: usage_01451.pdb # 18: usage_01452.pdb # 19: usage_01645.pdb # 20: usage_01646.pdb # 21: usage_01647.pdb # 22: usage_01694.pdb # 23: usage_01821.pdb # 24: usage_01823.pdb # 25: usage_01950.pdb # 26: usage_02043.pdb # 27: usage_02283.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 50 ( 42.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 50 ( 52.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_00079.pdb 1 TSEEWQGLMQFTLPVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 48 usage_00084.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRSC--- 34 usage_00086.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRS---- 33 usage_00107.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_00556.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRS---- 33 usage_00557.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRSCG-- 35 usage_00995.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_00996.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01098.pdb 1 -----------------CKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 31 usage_01283.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01284.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01339.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01346.pdb 1 -----------------GATALS-----NEAPIQRFWRDAHAGRVHAAND 28 usage_01440.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRSCG-- 35 usage_01450.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01451.pdb 1 -------------PVRLCREIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01452.pdb 1 -------------PVRLCREIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01645.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01646.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01647.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01694.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01821.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_01823.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRSCG-- 35 usage_01950.pdb 1 -------------PVRLCKEIELFHFDIGPFENMWPGIFVYMVHRSCG-- 35 usage_02043.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRSCG-- 35 usage_02283.pdb 1 -------------PARICRDIELFHFDIGPFENMWPGIFVYMIHRS---- 33 c iel gpfenmwpgifvym hrs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################