################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:21:01 2021 # Report_file: c_0189_4.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00101.pdb # 2: usage_00127.pdb # 3: usage_00128.pdb # 4: usage_00129.pdb # 5: usage_00130.pdb # 6: usage_00131.pdb # 7: usage_00153.pdb # 8: usage_00154.pdb # 9: usage_00371.pdb # 10: usage_00372.pdb # 11: usage_00388.pdb # 12: usage_00393.pdb # 13: usage_00394.pdb # 14: usage_00395.pdb # 15: usage_00470.pdb # 16: usage_00471.pdb # 17: usage_00560.pdb # 18: usage_00655.pdb # 19: usage_00762.pdb # 20: usage_00763.pdb # # Length: 224 # Identity: 179/224 ( 79.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 179/224 ( 79.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/224 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 59 usage_00127.pdb 1 --------AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 52 usage_00128.pdb 1 -------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 53 usage_00129.pdb 1 -------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 53 usage_00130.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 59 usage_00131.pdb 1 -------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 53 usage_00153.pdb 1 --------AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 52 usage_00154.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 59 usage_00371.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG-LLNYLRE-RHRFQTQQ 57 usage_00372.pdb 1 --------AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG-LLNYLRE-RHRFQTQQ 50 usage_00388.pdb 1 ------EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 54 usage_00393.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREARHAFQTQQ 59 usage_00394.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG-LLNYLREMRHRFQTQQ 58 usage_00395.pdb 1 -------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREARHAFQTQQ 53 usage_00470.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 59 usage_00471.pdb 1 --E-FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 57 usage_00560.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--IFIITEYMANGCLLNYLRE--MRFQTQQ 55 usage_00655.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----FQTQQ 55 usage_00762.pdb 1 -EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 59 usage_00763.pdb 1 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 60 AKVMMNLSHEKLVQLYGVCTKQ IFIITEYMANG LLNYLRE FQTQQ usage_00101.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 116 usage_00127.pdb 53 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGMT--RYVL-DDEYTSS 109 usage_00128.pdb 54 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGMT--RFVL-DDEYTSS 110 usage_00129.pdb 54 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGMT--RFVL-DDEYTSS 110 usage_00130.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGMT--RFVL-DDEYTSS 116 usage_00131.pdb 54 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGMT--RFVL-DDEYTSS 110 usage_00153.pdb 53 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 109 usage_00154.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 116 usage_00371.pdb 58 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 114 usage_00372.pdb 51 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 107 usage_00388.pdb 55 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG---------------- 98 usage_00393.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 116 usage_00394.pdb 59 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 115 usage_00395.pdb 54 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 110 usage_00470.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVLD------- 110 usage_00471.pdb 58 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSSK------------ 105 usage_00560.pdb 56 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL--------------- 100 usage_00655.pdb 56 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 112 usage_00762.pdb 60 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--RYVL-DDEYTSS 116 usage_00763.pdb 61 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--R----------- 107 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG usage_00101.pdb 117 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 176 usage_00127.pdb 110 TGSKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 169 usage_00128.pdb 111 TGTKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 170 usage_00129.pdb 111 TGTKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 170 usage_00130.pdb 117 TGTKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 176 usage_00131.pdb 111 TGTKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 170 usage_00153.pdb 110 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 169 usage_00154.pdb 117 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 176 usage_00371.pdb 115 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 174 usage_00372.pdb 108 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 167 usage_00388.pdb 99 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 154 usage_00393.pdb 117 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 176 usage_00394.pdb 116 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 175 usage_00395.pdb 111 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 170 usage_00470.pdb 111 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 166 usage_00471.pdb 106 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 161 usage_00560.pdb 101 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 156 usage_00655.pdb 113 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 172 usage_00762.pdb 117 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 176 usage_00763.pdb 108 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 163 FPV W PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL usage_00101.pdb 177 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 219 usage_00127.pdb 170 RLPRPHLASERVYAIMYSCWHEKADERPTFKILLSNILDVMDE- 212 usage_00128.pdb 171 RLPRPHLASERVYAIMYSCWHEKADERPTFKILLSNILDVMDE- 213 usage_00129.pdb 171 RLPRPHLASERVYAIMYSCWHEKADERPTFKILLSNILDVMDE- 213 usage_00130.pdb 177 RLPRPHLASERVYAIMYSCWHEKADERPTFKILLSNILDVMDE- 219 usage_00131.pdb 171 RLPRPHLASERVYAIMYSCWHEKADERPTFKILLSNILDVMDE- 213 usage_00153.pdb 170 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 213 usage_00154.pdb 177 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 220 usage_00371.pdb 175 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 217 usage_00372.pdb 168 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 210 usage_00388.pdb 155 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 198 usage_00393.pdb 177 RLYRPHLASAAVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 219 usage_00394.pdb 176 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 219 usage_00395.pdb 171 RLYRPHLASAAVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 213 usage_00470.pdb 167 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 209 usage_00471.pdb 162 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 204 usage_00560.pdb 157 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE- 199 usage_00655.pdb 173 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD-- 214 usage_00762.pdb 177 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 220 usage_00763.pdb 164 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM--- 204 RL RPHLAS VY IMYSCWHEKADERPTFKILLSNILDVM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################