################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:11 2021 # Report_file: c_0165_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00006.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00061.pdb # 5: usage_00138.pdb # 6: usage_00139.pdb # 7: usage_00140.pdb # 8: usage_00141.pdb # 9: usage_00168.pdb # 10: usage_00169.pdb # 11: usage_00170.pdb # # Length: 172 # Identity: 48/172 ( 27.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/172 ( 71.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/172 ( 21.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 HLNANLEGGVLTLAINRPEAKNALYGEL--YLWIAKALDEADQNKDVRVVVLRGAEHDFT 58 usage_00059.pdb 1 -LVVTSEDGITKI-FNRPKKKNAINTEYHE----IRALKAASKD-DSIITVLTGNGDYYS 53 usage_00060.pdb 1 -LVVTSEDGITKI-FNRPKKKNAINTEYHE----IRALKAASKD-DSIITVLTGNGDYYS 53 usage_00061.pdb 1 -LVVTSEDGITKI-FNRPKKKNAINTEYHE----IRALKAASKD-DSIITVLTGNGDYYS 53 usage_00138.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 usage_00139.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 usage_00140.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 usage_00141.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 usage_00168.pdb 1 TLVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 57 usage_00169.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 usage_00170.pdb 1 -LVVTSEDGITKIMFNRPKKKNAINTEM--YHEIMRALKAASKD-DSIITVLTGNGDYYS 56 LvvtsEdGitki fNRPkkKNAintE rALkaAskd DsiitVLtGngdyys usage_00006.pdb 59 AGNDM--KPAGQ------------------VPPFVLLKSAARLSKPLIIAVKGVAIGIGV 98 usage_00059.pdb 54 SGNDLDI----------PPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 103 usage_00060.pdb 54 SGNDL--T----NFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 107 usage_00061.pdb 54 SGNDL--T-------------VEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 98 usage_00138.pdb 57 SGNDL--T----N---------EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 101 usage_00139.pdb 57 SGNDL--T----NFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 110 usage_00140.pdb 57 SGNDL--T----N----PPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 106 usage_00141.pdb 57 SGNDL--T----N----PPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 106 usage_00168.pdb 58 SGNDL--T----NFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 111 usage_00169.pdb 57 SGNDL--T----NFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 110 usage_00170.pdb 57 SGNDL--T----NFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISV 110 sGNDl VllrefvgcfidfpKPLIavVnGpAvGIsV usage_00006.pdb 99 TILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELL--- 147 usage_00059.pdb 104 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKISPAKATELIFG-- 153 usage_00060.pdb 108 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKISPAKATELIFG-- 157 usage_00061.pdb 99 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKISPAKATELIFG-- 148 usage_00138.pdb 102 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 153 usage_00139.pdb 111 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 162 usage_00140.pdb 107 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 158 usage_00141.pdb 107 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 158 usage_00168.pdb 112 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 163 usage_00169.pdb 111 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 162 usage_00170.pdb 111 TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 162 TlLglfDaVyAsdrAtFhtPFshLGqSPEGcsSytfpKi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################