################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:51 2021 # Report_file: c_0960_85.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00220.pdb # 2: usage_00221.pdb # 3: usage_00347.pdb # 4: usage_00398.pdb # 5: usage_00432.pdb # 6: usage_00487.pdb # 7: usage_00798.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 49 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 49 ( 44.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00220.pdb 1 LLNYRQDG----TTFWNLFF-VAGLRD-S---KGNIVNYVGVQSK---- 36 usage_00221.pdb 1 LLNYRQDG----TTFWNLFF-VAGLRD-S---KGNIVNYVGVQSK---- 36 usage_00347.pdb 1 LLNYRVDG----TTFWNQFF-IAALRD-A---GGNVTNFVGVQCK---- 36 usage_00398.pdb 1 RVTMSQ--ASTEASSDKVTV-NYYD-E-----EGSIP-IDQAGLF--LT 37 usage_00432.pdb 1 YLCRRPDS----TWHSAEVIQSRVNDQE--------GREEFYVHYVG-- 35 usage_00487.pdb 1 LLNYKKDG----TPFWNLLT-VTPIKD-D---QGNTIKFIGMQVE---- 36 usage_00798.pdb 1 LRNYRKDG----SAFWNELS-ITPVKSDFDQR----TYFIGIQKD---- 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################