################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:43 2021 # Report_file: c_1373_193.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00324.pdb # 2: usage_00370.pdb # 3: usage_00553.pdb # 4: usage_00555.pdb # 5: usage_00948.pdb # 6: usage_01157.pdb # 7: usage_01488.pdb # 8: usage_01492.pdb # 9: usage_01493.pdb # 10: usage_01496.pdb # 11: usage_01542.pdb # 12: usage_01545.pdb # 13: usage_01547.pdb # 14: usage_01795.pdb # 15: usage_01804.pdb # 16: usage_01811.pdb # 17: usage_01878.pdb # # Length: 55 # Identity: 9/ 55 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 55 ( 54.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 55 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00324.pdb 1 ---SEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 52 usage_00370.pdb 1 ---SEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVAD 52 usage_00553.pdb 1 ---SEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 52 usage_00555.pdb 1 ----EIAHRFNDVGEEHFIGLVLITFSQYLQKCPYEEHAKLVKEVTDLAKACVAD 51 usage_00948.pdb 1 YEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLT------ 49 usage_01157.pdb 1 ---SEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 52 usage_01488.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01492.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01493.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01496.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01542.pdb 1 ---SEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVAD 52 usage_01545.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01547.pdb 1 ----EIAHRFNDVGEEHFIGLVLITFSQYLQKCPYEEHAKLVKEVTDLAKACVAD 51 usage_01795.pdb 1 ---SEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 52 usage_01804.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAAD 51 usage_01811.pdb 1 ----EIAHRFNDVGEEHFIGLVLITFSQYLQKCPYEEHAKLVKEVTDLAKACVAD 51 usage_01878.pdb 1 ----EIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCA-- 49 eiahrF d Ge hF gLvL fSqylq cp h kLV E t a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################