################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:25 2021 # Report_file: c_0610_25.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00196.pdb # 2: usage_00360.pdb # 3: usage_00471.pdb # 4: usage_00472.pdb # 5: usage_00473.pdb # 6: usage_00491.pdb # 7: usage_00492.pdb # 8: usage_00493.pdb # 9: usage_00494.pdb # 10: usage_00495.pdb # 11: usage_00496.pdb # 12: usage_00497.pdb # 13: usage_00498.pdb # 14: usage_00501.pdb # 15: usage_00535.pdb # 16: usage_00705.pdb # 17: usage_00706.pdb # # Length: 97 # Identity: 16/ 97 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 97 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 97 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00196.pdb 1 -LDRAIADRDQIYGVIKGSAMTNAG-ERNGFNVPNPDLQTLAIRQAMDQAKVHPSSISYI 58 usage_00360.pdb 1 -LDDAVADGDRILAVIRGTATNQDGS--------AD-AQAKVYRMALKAAGVEPGTVGLV 50 usage_00471.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00472.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00473.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00491.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00492.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00493.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00494.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00495.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00496.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00497.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00498.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00501.pdb 1 PLSKAKADGDHIYGLIKGTAVNHDG-KTNGYSVPNPNAQAAVIKQALKDAGTDPRAVSYI 59 usage_00535.pdb 1 -LADAVADGDRILGVIRGTAVNHGG-HTHGFTVPNPLAQAAVIRSAWRRAGVDPRDIGCI 58 usage_00705.pdb 1 -LKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 58 usage_00706.pdb 1 RLKDAEADRDHIYGIIIGSGINQDG-KTNGITAPSAKSQMDLERDIYETYGIHPESISYV 59 L A AD D I g I G n G Q r g P usage_00196.pdb 59 EGHGSGTKLGDPIEVLGLNNAFRWATDDKQFCYLGS- 94 usage_00360.pdb 51 EAHGTGTPVGDPLEFSSLAEVYG----T--DGPCALG 81 usage_00471.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00472.pdb 59 EMHGTGT--GDPIELEALSTVFQEKTDKKQFCAIGS- 92 usage_00473.pdb 59 EMHGTGTKGDPIELEALSTVFQEKTDK-KQFCAIGS- 93 usage_00491.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00492.pdb 59 EMHGTGT--GDPIELEALSTVFQEKTDKKQFCAIGS- 92 usage_00493.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00494.pdb 59 EMHGTGT--GDPIELEALSTVFQEKTDKKQFCAIGS- 92 usage_00495.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00496.pdb 59 EMHGTGT--GDPIELEALSTVFQEKTDKKQFCAIGS- 92 usage_00497.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00498.pdb 59 EMHGTGT--GDPIELEALSTVFQEKTDKKQFCAIGS- 92 usage_00501.pdb 60 EAHGTGTSLGDPIEITGLTKAFSEQTQDKQFCAIG-S 95 usage_00535.pdb 59 EAHGTGTSLGDPIEIAGLNAAFAEFTDARNFCAIGS- 94 usage_00705.pdb 59 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 94 usage_00706.pdb 60 EMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGS- 95 E HGtGT gdp e l fc g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################