################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:59 2021 # Report_file: c_1074_5.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00018.pdb # 2: usage_00102.pdb # 3: usage_00103.pdb # 4: usage_00215.pdb # 5: usage_00221.pdb # 6: usage_00234.pdb # 7: usage_00331.pdb # 8: usage_00416.pdb # 9: usage_00417.pdb # 10: usage_00418.pdb # 11: usage_00419.pdb # 12: usage_00422.pdb # 13: usage_00491.pdb # # Length: 77 # Identity: 41/ 77 ( 53.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 77 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 77 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00102.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMN--------- 50 usage_00103.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00215.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00221.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00234.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00331.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00416.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00417.pdb 1 FPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 60 usage_00418.pdb 1 ----------IVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 50 usage_00419.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00422.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAAD 59 usage_00491.pdb 1 -PGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMN--------- 50 IVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMN usage_00018.pdb 60 IIKKAMIDLNARLKEER 76 usage_00102.pdb ----------------- usage_00103.pdb 60 IIKKAMIDLNARLKEER 76 usage_00215.pdb 60 IIKKAMIDLNARLKEER 76 usage_00221.pdb 60 IIKKAMIDLNARLKEER 76 usage_00234.pdb 60 IIKKAMIDLNARLKEER 76 usage_00331.pdb 60 IIKKAMIDLNARLKEER 76 usage_00416.pdb 60 IIKKAMIDLNARLKEER 76 usage_00417.pdb 61 IIKKAMIDLNARLKEER 77 usage_00418.pdb 51 IIKKAMIDLNARLKEER 67 usage_00419.pdb 60 IIKKAMIDLNARLKEER 76 usage_00422.pdb 60 IIKKAMIDLNARLKEER 76 usage_00491.pdb ----------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################