################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:26 2021 # Report_file: c_1356_59.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00131.pdb # 2: usage_00296.pdb # 3: usage_00353.pdb # 4: usage_00354.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 47 ( 10.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 47 ( 57.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 ---NFFFKLFDLDLKYEELL-ERYPHKLQVY---------------- 27 usage_00296.pdb 1 YNKWRDLIV-----AVVSHFIERYGIEEV--RTWL-------FEV-- 31 usage_00353.pdb 1 ---RTRWAK-----AREYLI-SLDPENLT--LLEKIQTSLFVYSIED 36 usage_00354.pdb 1 ---RTRWAK-----AREYLI-SLDPENLT--LLEKIQTSLFVYSIED 36 a e l p l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################