################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:31 2021 # Report_file: c_0674_24.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00017.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # # Length: 80 # Identity: 19/ 80 ( 23.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 80 ( 83.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 80 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 QQRVYFQDLNGKIREAQRGGDNPWTGGSS--QNVIGEAKLFSPLAAVTWK-SAQ-GIQIR 56 usage_00086.pdb 1 QQRVYFQDLNGKIREAQRGGDNPWTGGSS--QNVIGEAKLFSPLAAVTWK-SAQ-GIQIR 56 usage_00087.pdb 1 QIRVYCVNKDNILSEFVYDGSKW-ITG-QLGSV-GVKVGSNSKLAALQWGGSESAPPNIR 57 QqRVYfqdlngkirEaqrgGdnp tgG s qn igeaklfSpLAAvtWk Saq giqIR usage_00017.pdb 57 VYCVNK--D-NILSEFV--- 70 usage_00086.pdb 57 VYCVNK--D-NILSEFV--- 70 usage_00087.pdb 58 VYYQKSNGSGSSIHEYVWSG 77 VYcvnk d nilsEfV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################