################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:57:07 2021 # Report_file: c_1201_55.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00192.pdb # 2: usage_00193.pdb # 3: usage_00194.pdb # 4: usage_00195.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # 7: usage_00198.pdb # 8: usage_00411.pdb # 9: usage_00515.pdb # 10: usage_00516.pdb # 11: usage_00517.pdb # 12: usage_00830.pdb # 13: usage_00831.pdb # 14: usage_00832.pdb # 15: usage_00833.pdb # 16: usage_00837.pdb # 17: usage_00838.pdb # 18: usage_00839.pdb # 19: usage_00840.pdb # 20: usage_00841.pdb # 21: usage_01034.pdb # 22: usage_01035.pdb # 23: usage_01036.pdb # # Length: 59 # Identity: 5/ 59 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 59 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 59 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00192.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00193.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00194.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00195.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00196.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00197.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00198.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00411.pdb 1 DVSGFAEFEVQGRNLTQTNT-SDDKVAT---ITSGN-----------KSTNV----TVH 40 usage_00515.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00516.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00517.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00830.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_00831.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00832.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00833.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_00837.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00838.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_00839.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_00840.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_00841.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_01034.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 usage_01035.pdb 1 --------M-NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 45 usage_01036.pdb 1 ----------NIRPLH---DRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG-N- 44 niRpLh d vivKrke ksaGg trgeV n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################