################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:52 2021 # Report_file: c_1228_49.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00002.pdb # 2: usage_00235.pdb # 3: usage_00239.pdb # 4: usage_00449.pdb # 5: usage_00500.pdb # 6: usage_00568.pdb # 7: usage_00638.pdb # 8: usage_00639.pdb # 9: usage_00644.pdb # 10: usage_00645.pdb # 11: usage_00646.pdb # 12: usage_00782.pdb # 13: usage_00783.pdb # # Length: 54 # Identity: 18/ 54 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 54 ( 61.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 54 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 HYLVIACSDSRVPAEKLT----GELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 50 usage_00235.pdb 1 EYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLVSNKDLNCMSCLEYTVDHLK 54 usage_00239.pdb 1 RFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLE 54 usage_00449.pdb 1 --LWIGCSDSRIPAEQITGLQPGDAFVHRNIANLVCNTDLNVMSVIEYAVKHLK 52 usage_00500.pdb 1 DFLWIGCADSRVPAERLTGLYSGELFVHRNVANQVIHTDLNCLSVVQYAVDVLQ 54 usage_00568.pdb 1 -YLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 53 usage_00638.pdb 1 HYLWIGCSNSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 54 usage_00639.pdb 1 HYLWIGCSNSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 54 usage_00644.pdb 1 HYLWIGCSDSRAPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 54 usage_00645.pdb 1 HYLWIGCSDSRAPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 54 usage_00646.pdb 1 HYLWIGCSDSRAPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLK 54 usage_00782.pdb 1 RFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLE 54 usage_00783.pdb 1 RFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLE 54 L IgC SR pae lt Ge FVhRNvaN V tD Nc Sv YaVd L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################