################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:02:16 2021 # Report_file: c_0121_22.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00094.pdb # 2: usage_00095.pdb # 3: usage_00220.pdb # 4: usage_00280.pdb # 5: usage_00281.pdb # 6: usage_00287.pdb # 7: usage_00292.pdb # 8: usage_00308.pdb # 9: usage_00314.pdb # 10: usage_00315.pdb # 11: usage_00351.pdb # 12: usage_00352.pdb # 13: usage_00358.pdb # 14: usage_00384.pdb # 15: usage_00421.pdb # 16: usage_00461.pdb # 17: usage_00465.pdb # 18: usage_00466.pdb # 19: usage_00485.pdb # 20: usage_00489.pdb # 21: usage_00504.pdb # 22: usage_00516.pdb # 23: usage_00517.pdb # 24: usage_00525.pdb # # Length: 124 # Identity: 35/124 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/124 ( 39.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/124 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 VQLQQSGAELARPGASVKLSCKASGYTFTDYYINWMKQRTGQGLEWIGEIYPGVGTTYYD 60 usage_00095.pdb 1 VQLQQSGAELARPGASVKLSCKASGYTFTDYYINWMKQRTGQGLEWIGEIYPGVGTTYYD 60 usage_00220.pdb 1 VQLQQSGAELARPGASVKLSCRTSGYSFTTYWMQWVRQRPGQGLEWIAAIYPGDDDARYT 60 usage_00280.pdb 1 VQLQQSGTELMKPGRSLKISCKTTGYIFSNYWIEWVKQRPGHGLEWIGKILPGGGSNTYN 60 usage_00281.pdb 1 VQLQQSGTELMKPGRSLKISCKTTGYIFSNYWIEWVKQRPGHGLEWIGKILPGGGSNTYN 60 usage_00287.pdb 1 VQLQQSGDDLVKPGASVKLSCKASGYTFTTYYINWMRQRPGQGLEWIGRIAPASGTTYSS 60 usage_00292.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIAWVKQRPGHGLEWIGEILPGSGSTNYN 60 usage_00308.pdb 1 VQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYYN 60 usage_00314.pdb 1 VQLQQSGPELVKPGASVKISCKASGYSFTSYYIHWVKQRPGQGLEWIGWIYPGSYNTEYS 60 usage_00315.pdb 1 VQLQQSGPELVKPGASVKISCKASGYSFTSYYIHWVKQRPGQGLEWIGWIYPGSYNTEYS 60 usage_00351.pdb 1 VQLQQSGAELMKPGASVKLSCKAAGYTFTAYWIEWIRQRPGHGLEWIGEILPGSSSTNCN 60 usage_00352.pdb 1 VQLQQSGAELMKPGASVKLSCKAAGYTFTAYWIEWIRQRPGHGLEWIGEILPGSSSTNCN 60 usage_00358.pdb 1 -QLQQSGPELVKPGASVKISCKASGYAFISSWMNWVKQRPGKGLEWIGRIYPGDGDTHYN 59 usage_00384.pdb 1 VQLKQSGAELMKPGASVKISCKATGYKFSSYWIEWVKQRPGHGLEWIGEIFPGSGNTNYN 60 usage_00421.pdb 1 -QLVQSGAEVKKPGATVKISCKVSGYTFTDYYINWMQQAPGKGLEWIGRIYPGYGNTKYN 59 usage_00461.pdb 1 VQLQQSGTELKKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPEIGMTNYN 60 usage_00465.pdb 1 VQLQESGAELMKPGASVKLSCKTSGYTFIGYWIEWLKQRPGHGLEWVGEIFPGSGRTKYN 60 usage_00466.pdb 1 -QLQQSGTGLARPGASVKLSCKASGYTFTSYGISWVTQRAGQGLEWIGVIYPRSGNTYYN 59 usage_00485.pdb 1 VQLQESGAELMKPGASVKISCKATGYTFTTYWIEWIKQRPGHSLEWIGEILPGSDSTYYN 60 usage_00489.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGDTIFN 60 usage_00504.pdb 1 VHLQQSGAELMKPGASVKISCKATGYTFTSYWIEWVKQRPGHGLEWLGEILPGSGYIHYN 60 usage_00516.pdb 1 VQLQQSGPELVKPGASVKMSCKASGYTFTDYVISWVKQRTGQGLEWIGEFYPGTDSTYYT 60 usage_00517.pdb 1 VQLQQSGPELVKPGASVKMSCKASGYTFTDYVISWVKQRTGQGLEWIGEFYPGTDSTYYT 60 usage_00525.pdb 1 VQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYYN 60 qL SG PG s K SCk GY F y W Qr G gLEW g P usage_00094.pdb 61 EKFKGKATLTADKSSRSAYMQLSSLTSEDSAVYFCARRTVTMG----R-YAMDYWGQGTS 115 usage_00095.pdb 61 EKFKGKATLTADKSSRSAYMQLSSLTSEDSAVYFCARRTVTMG----R-YAMDYWGQGTS 115 usage_00220.pdb 61 QKFKGKATLTADRSSSIVYLQLNSLTSEDSAVYSCSRGRSL------Y-YTMDYWGQGTS 113 usage_00280.pdb 61 DKFKGKATFTADTSSNIAYMQLSSLTSEDSAVYYCARGEDYYA----YWYVLDYWGQGTT 116 usage_00281.pdb 61 DKFKGKATFTADTSSNIAYMQLSSLTSEDSAVYYCARGEDYYA----YWYVLDYWGQGTT 116 usage_00287.pdb 61 EMFKDKATLTVDTSSNTAYIQLSSLSSEDSAVYFCARADYGFN----SGEAMDYWGQGTS 116 usage_00292.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARSPYY------Y-GNWDYWGQGTT 113 usage_00308.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGD----------GNYGYWGQGTT 110 usage_00314.pdb 61 EKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYYCARSE----------DWFAYWGQGTL 110 usage_00315.pdb 61 EKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYYCARSE----------DWFAYWGQGTL 110 usage_00351.pdb 61 EMFKGKATFTADTSSNSAYMQLSSLTTEDSAIYYCTRDFSGDR----SNLYFDVWGTGTT 116 usage_00352.pdb 61 EMFKGKATFTADTSSNSAYMQLSSLTTEDSAIYYCTRDFSGDR----SNLYFDVWGTGTT 116 usage_00358.pdb 60 GKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCAREETA------T-GGFDYWGQGTT 112 usage_00384.pdb 61 EKFKGKATLTADTSSNTAYMQLSSLTSEDSAVYYCARRGAFYSYGSSY-YAMDFWGQGTS 119 usage_00421.pdb 60 DKFKGRVTLTADTSTDTAYMELSSLRSEDTAVYFCARSL----------TFFDVWGQGTM 109 usage_00461.pdb 61 ENFKGKATFTANTSSNTVYMQLSSLTSEDSAVYYCARPYDYS--------WFAYWGQGTL 112 usage_00465.pdb 61 EKFKGRATFTADTSSNMAYMQLSSLTTEDSAIYYCARYYYGSY------YALDYWGQGTS 114 usage_00466.pdb 60 EKFRGKATLTADKSSSSAYMELRGLTAEDSAVYFCAREN----------YGSVYWGQGTT 109 usage_00485.pdb 61 EKVKGKVTFTADASSNTAYMQLSSLTSEDSAVYYCARGD----------GFYVYWGQGTT 110 usage_00489.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARWVLD------Y-YGMDYWGQGTS 113 usage_00504.pdb 61 EKFKGKATFTTDTSSNTAYMQLSSLTSEDSAVYYCSRALALY--------AMDYWGQGTS 112 usage_00516.pdb 61 ENFKGRATLTADKSSKTAYMQLSSLTSEDSAVYFCATA-------------FDYWGQGTT 107 usage_00517.pdb 61 ENFKGRATLTADKSSKTAYMQLSSLTSEDSAVYFCATA-------------FDYWGQGTT 107 usage_00525.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGD----------GNYGYWGQGTT 110 fkg T T d Ss Y L sL EDsA Y C WG GT usage_00094.pdb 116 VTVS 119 usage_00095.pdb 116 VTVS 119 usage_00220.pdb 114 VTV- 116 usage_00280.pdb 117 VTVS 120 usage_00281.pdb 117 VTVS 120 usage_00287.pdb 117 VTVS 120 usage_00292.pdb 114 LTVS 117 usage_00308.pdb 111 LTVS 114 usage_00314.pdb 111 VTV- 113 usage_00315.pdb 111 VTV- 113 usage_00351.pdb 117 VTVS 120 usage_00352.pdb 117 VTVS 120 usage_00358.pdb 113 LTV- 115 usage_00384.pdb 120 VTVS 123 usage_00421.pdb 110 VTVS 113 usage_00461.pdb 113 VTVS 116 usage_00465.pdb 115 VTVS 118 usage_00466.pdb 110 LTVS 113 usage_00485.pdb 111 LTVS 114 usage_00489.pdb 114 LTVS 117 usage_00504.pdb 113 VTV- 115 usage_00516.pdb 108 LTVS 111 usage_00517.pdb 108 LTVS 111 usage_00525.pdb 111 LTVS 114 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################