################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:26:35 2021 # Report_file: c_1363_56.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00641.pdb # 2: usage_00642.pdb # 3: usage_00643.pdb # 4: usage_00644.pdb # 5: usage_00984.pdb # 6: usage_00985.pdb # 7: usage_00986.pdb # 8: usage_00987.pdb # 9: usage_00988.pdb # 10: usage_01000.pdb # 11: usage_01001.pdb # 12: usage_01145.pdb # 13: usage_01262.pdb # 14: usage_01263.pdb # 15: usage_01264.pdb # 16: usage_01265.pdb # 17: usage_01266.pdb # 18: usage_01267.pdb # 19: usage_01268.pdb # 20: usage_01638.pdb # 21: usage_01639.pdb # 22: usage_01835.pdb # 23: usage_01836.pdb # 24: usage_01923.pdb # 25: usage_01924.pdb # 26: usage_01925.pdb # # Length: 70 # Identity: 39/ 70 ( 55.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 70 ( 55.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 70 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00641.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00642.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00643.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00644.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00984.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00985.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00986.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00987.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_00988.pdb 1 -KDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 59 usage_01000.pdb 1 -----QRVRQGVIRAASLGHGVLRAGGSAVDAVEAAVAALEDDAEFNAGHGSVLTENGDV 55 usage_01001.pdb 1 SCERRQRVRQGVIRAASLGHGVLRAGGSAVDAVEAAVAALEDDAEFNAGHGSVLTENGDV 60 usage_01145.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01262.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01263.pdb 1 -KDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 59 usage_01264.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01265.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01266.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01267.pdb 1 -KDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 59 usage_01268.pdb 1 -----ERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 55 usage_01638.pdb 1 -------------------YGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 41 usage_01639.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01835.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01836.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01923.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01924.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 usage_01925.pdb 1 SKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEV 60 G LR GGSAVDAVE AV ALEDD EFNAG GSVL NG V usage_00641.pdb 61 EMDASIMDGK 70 usage_00642.pdb 61 EMDASIMDGK 70 usage_00643.pdb 61 EMDASIMDGK 70 usage_00644.pdb 61 EMDASIMDGK 70 usage_00984.pdb 61 EMDASIMDGK 70 usage_00985.pdb 61 EMDASIMDGK 70 usage_00986.pdb 61 EMDASIMD-- 68 usage_00987.pdb 61 EMDASIMDGK 70 usage_00988.pdb 60 EMDASIMDGK 69 usage_01000.pdb 56 EMDASIMDGR 65 usage_01001.pdb 61 EMDASIMDGR 70 usage_01145.pdb 61 EMDASIMDGK 70 usage_01262.pdb 61 EMDASIMDGK 70 usage_01263.pdb 60 EMDASIMDGK 69 usage_01264.pdb 61 EMDASIMDGK 70 usage_01265.pdb 61 EMDASIMDGK 70 usage_01266.pdb 61 EMDASIMD-- 68 usage_01267.pdb 60 EMDASIMD-- 67 usage_01268.pdb 56 EMDASIMDGK 65 usage_01638.pdb 42 EMDASIMDGK 51 usage_01639.pdb 61 EMDASIMDGK 70 usage_01835.pdb 61 EMDASIMD-- 68 usage_01836.pdb 61 EMDASIMDGK 70 usage_01923.pdb 61 EMDASIMDGK 70 usage_01924.pdb 61 EMDASIMDGK 70 usage_01925.pdb 61 EMDASIMDGK 70 EMDASIMD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################