################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:57 2021 # Report_file: c_0024_22.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00300.pdb # 2: usage_00301.pdb # 3: usage_00304.pdb # 4: usage_00305.pdb # 5: usage_00306.pdb # 6: usage_00307.pdb # # Length: 250 # Identity: 145/250 ( 58.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 158/250 ( 63.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/250 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00300.pdb 1 --------------------EELAALDTVDAGKLFAVGKARDIPGAAHLLRYYAGAADKV 40 usage_00301.pdb 1 --------------------EELAALDTVDAGKLFAVGKARDIPGAAHLLRYYAGAADKV 40 usage_00304.pdb 1 SGSERGRIMARLADLVEEHAGELAALESLDAGKHPAVTRAVDVGNAAGSLRYFAGAADKI 60 usage_00305.pdb 1 SGSERGRIMARLADLVEEHAGELAALESLDAGKHPAVTRAVDVGNAAGSLRYFAGAADKI 60 usage_00306.pdb 1 SGSERGRIMARLADLVEEHAGELAALESLDAGKHPAVTRAVDVGNAAGSLRYFAGAADKI 60 usage_00307.pdb 1 SGSERGRIMARLADLVEEHAGELAALESLDAGKHPAVTRAVDVGNAAGSLRYFAGAADKI 60 ELAAL DAGK AV A D AA LRY AGAADK usage_00300.pdb 41 HGATLKMAQRMHGYTLKEPVGVVGHIVPWNYPTTMFFFKVGPALAAGCAVVVKPAEQTPL 100 usage_00301.pdb 41 HGATLKMAQRMHGYTLKEPVGVVGHIVPWNYPTTMFFFKVGPALAAGCAVVVKPAEQTPL 100 usage_00304.pdb 61 HGETLKMPGQFQGHTLREPLGVAGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPL 120 usage_00305.pdb 61 HGETLKMPGQFQGHTLREPLGVAGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPL 120 usage_00306.pdb 61 HGETLKMPGQFQGHTLREPLGVAGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPL 120 usage_00307.pdb 61 HGETLKMPGQFQGHTLREPLGVAGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPL 120 HG TLKM G TL EP GV G I PWN P TMF KV PALAAGCA VVKPAEQTPL usage_00300.pdb 101 SALFYAHLAREAGVPAGVLNVVPGFGPTAGAAVAAHMDVDKVSFTGSTEVGRLVMRAAAE 160 usage_00301.pdb 101 SALFYAHLAREAGVPAGVLNVVPGFGPTAGAAVAAHMDVDKVSFTGSTEVGRLVMRAAAE 160 usage_00304.pdb 121 SALYLAQLAKQAGVPDGVINVVPGFGPTAGAALASHMDVDMVSFTGSTEVGRLIMKASAE 180 usage_00305.pdb 121 SALYLAQLAKQAGVPDGVINVVPGFGPTAGAALASHMDVDMVSFTGSTEVGRLIMKASAE 180 usage_00306.pdb 121 SALYLAQLAKQAGVPDGVINVVPGFGPTAGAALASHMDVDMVSFTGSTEVGRLIMKASAE 180 usage_00307.pdb 121 SALYLAQLAKQAGVPDGVINVVPGFGPTAGAALASHMDVDMVSFTGSTEVGRLIMKASAE 180 SAL A LA AGVP GV NVVPGFGPTAGAA A HMDVD VSFTGSTEVGRL M A AE usage_00300.pdb 161 SNLKPVSLELGGKSPVIVFDDADLDMAVNLVNFATYTNKGEIVAGTRIYVQEGIYDEFVK 220 usage_00301.pdb 161 SNLKPVSLELGGKSPVIVFDDADLDMAVNLVNFATYTNKGEICVAGTRIYVQEGIYDEFV 220 usage_00304.pdb 181 SNLKPVYLELGGKSPLIVFDDADLDMAVELAVGASFFNKGEACVAASRVYVQERVYDRFE 240 usage_00305.pdb 181 SNLKPVYLELGGKSPLIVFDDADLDMAVELAVGASFFNKGEACVAASRVYVQERVYDRFE 240 usage_00306.pdb 181 SNLKPVYLELGGKSPLIVFDDADLDMAVELAVGASFFNKGEACVAASRVYVQERVYDRFE 240 usage_00307.pdb 181 SNLKPVYLELGGKSPLIVFDDADLDMAVELAVGASFFNKGEACVAASRVYVQERVYDRFE 240 SNLKPV LELGGKSP IVFDDADLDMAV L A NKGE cva r yvqe yd f usage_00300.pdb 221 KAAELASKS- 229 usage_00301.pdb 221 KKAAELASKS 230 usage_00304.pdb 241 ERLAERMR-- 248 usage_00305.pdb 241 ERLAERMR-- 248 usage_00306.pdb 241 ERLAERMR-- 248 usage_00307.pdb 241 ERLAERMR-- 248 ae #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################