################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:28 2021 # Report_file: c_0871_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00049.pdb # 5: usage_00050.pdb # 6: usage_00051.pdb # 7: usage_00052.pdb # # Length: 77 # Identity: 41/ 77 ( 53.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 77 ( 53.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 77 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -KFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKT 59 usage_00010.pdb 1 -KFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKT 59 usage_00011.pdb 1 KKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKT 60 usage_00049.pdb 1 -------------GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKT 47 usage_00050.pdb 1 ------------MGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKT 48 usage_00051.pdb 1 ------------MGITSENVAQKFSITRQEQDQAAVGSHRKTAAATAAGRFKDEIIPIKT 48 usage_00052.pdb 1 ------------MGITSENVAQKFSITRQEQDQAAVGSHRKTAAATAAGRFKDEIIPIKT 48 G TSENVAQ F RQEQDQAAV SHRK AAATAAG FKDEIIP KT usage_00009.pdb 60 KLVD------------- 63 usage_00010.pdb 60 KLVD------------- 63 usage_00011.pdb 61 KLVD------------- 64 usage_00049.pdb 48 KLVDPKTGDEKPITVS- 63 usage_00050.pdb 49 KLVD------------- 52 usage_00051.pdb 49 KIVDPKTGDEKPVTISV 65 usage_00052.pdb 49 KIVDPKTGDEKPVTISV 65 K VD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################