################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:22 2021 # Report_file: c_1484_84.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_02177.pdb # 2: usage_02180.pdb # 3: usage_02181.pdb # 4: usage_02182.pdb # 5: usage_02183.pdb # 6: usage_02184.pdb # 7: usage_02271.pdb # 8: usage_02272.pdb # 9: usage_02945.pdb # # Length: 140 # Identity: 1/140 ( 0.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/140 ( 15.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 83/140 ( 59.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02177.pdb 1 TQQVLSEN---QKLIANKFNQALGAMQTGFTTTNEAFQKVQDAVNNNAQALSKLASELSN 57 usage_02180.pdb 1 ------------------FNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ--- 39 usage_02181.pdb 1 -----------QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ--- 46 usage_02182.pdb 1 --------NQ-KQIANQFNKAI-SQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ--- 47 usage_02183.pdb 1 -----------QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQL-- 47 usage_02184.pdb 1 -------N---QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ--- 47 usage_02271.pdb 1 TQNVLYEN---QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSS 57 usage_02272.pdb 1 TQNVLYEN---QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSS 57 usage_02945.pdb 1 ----------ALGK----LQDV-VNQNAQALNTLVKQLSSNFGAISSVLNDIS-G-G--- 40 q ttT a k qd vn naqal usage_02177.pdb 58 TFGAISASIGDIIQRLDVLEQSGGRGGSIPNFGSLT--------QINTTLL---DLTYEM 106 usage_02180.pdb 40 ---------------------------------------------INASVV---NIQEEI 51 usage_02181.pdb 47 ------------------------------------------ISGINASVV---NIQEEI 61 usage_02182.pdb 48 --------------------------------------------GINASVV---NIQEEI 60 usage_02183.pdb 48 ---------------------------------------------INASVV---NIQEEI 59 usage_02184.pdb 48 ----------------------------------------------NASVV---NIQEEI 58 usage_02271.pdb 58 NFGAISSVLNDILSRLDKVEA---------------EVLGDIS-GINASVV---NIQKEI 98 usage_02272.pdb 58 NFGAISSVLNDILSRLDKVEA---------------EVLGDIS-GINASVV---NIQKEI 98 usage_02945.pdb 41 ---------------------------------------------RGGDISGINASVVNI 55 n ei usage_02177.pdb 107 LSLQQVVKALNES------- 119 usage_02180.pdb 52 DRLNEVAKNL---------- 61 usage_02181.pdb 62 DRLNEVAKNLNESL------ 75 usage_02182.pdb 61 DRLNEVAKNLNESL------ 74 usage_02183.pdb 60 DRLNEVAKNLNES------- 72 usage_02184.pdb 59 DRLNEVAKNLNESL------ 72 usage_02271.pdb 99 DRLNEVAKNLNESL------ 112 usage_02272.pdb 99 DRLNEVAKNLNESL------ 112 usage_02945.pdb 56 QKEIDRLNEVAKNLNESLID 75 l v k l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################