################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:41 2021 # Report_file: c_0614_13.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00051.pdb # 2: usage_00106.pdb # 3: usage_00107.pdb # 4: usage_00162.pdb # 5: usage_00167.pdb # 6: usage_00176.pdb # 7: usage_00177.pdb # 8: usage_00178.pdb # 9: usage_00201.pdb # # Length: 66 # Identity: 8/ 66 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 66 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 66 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -YQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITAN-GPLAVAATKR 58 usage_00106.pdb 1 GWT-DARYILTGDEFDADEALR-RLLTEVVEPGEELARALEYAERIARA-APLAVRAALQ 57 usage_00107.pdb 1 --T-DARYILTGDEFDADEALR-RLLTEVVEPGEELARALEYAERIARA-APLAVRAALQ 55 usage_00162.pdb 1 SWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKR 60 usage_00167.pdb 1 -RKVALELVLTGEPMTASDALRWGLINEVVPDGTVVEAALALAERITCN-APLSVQASKR 58 usage_00176.pdb 1 GWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQ-APLGVQATLR 59 usage_00177.pdb 1 GWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQ-APLGVQATLR 59 usage_00178.pdb 1 GWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQ-APLGVQATLR 59 usage_00201.pdb 1 -RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVN-APLSVQASKR 58 Lt A A e V g A A I Pl v a usage_00051.pdb 59 III--- 61 usage_00106.pdb 58 SAF--- 60 usage_00107.pdb 56 SAFQ-- 59 usage_00162.pdb 61 QVYG-- 64 usage_00167.pdb 59 VAYG-- 62 usage_00176.pdb 60 NARLAV 65 usage_00177.pdb 60 NARLAV 65 usage_00178.pdb 60 NARLAV 65 usage_00201.pdb 59 IAYG-- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################