################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:34:09 2021 # Report_file: c_0275_8.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00003.pdb # 2: usage_00017.pdb # 3: usage_00019.pdb # 4: usage_00044.pdb # 5: usage_00056.pdb # 6: usage_00063.pdb # 7: usage_00070.pdb # 8: usage_00085.pdb # 9: usage_00088.pdb # 10: usage_00090.pdb # 11: usage_00114.pdb # 12: usage_00120.pdb # 13: usage_00133.pdb # 14: usage_00156.pdb # 15: usage_00175.pdb # 16: usage_00177.pdb # 17: usage_00190.pdb # 18: usage_00194.pdb # 19: usage_00201.pdb # 20: usage_00205.pdb # 21: usage_00219.pdb # # Length: 97 # Identity: 4/ 97 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 97 ( 14.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 97 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 DIELTQTTSSLSASLGDRVTISCRASQD-I--S----N-YLNWYQQ---NPDGTVKLLIY 49 usage_00017.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQD-V--N----T-AVAWYQQ---KPGKAPKLLIY 49 usage_00019.pdb 1 --ELRIFPKKMDAELGQKVDLVCEVLGS-V--S----Q-GCSWLFQNSSSKLPQPTFVVY 50 usage_00044.pdb 1 --QMTQSPSSLSASVGDRVTITCKTSQD-I--N----K-YMAWYQQ---TPGKAPRLLIH 47 usage_00056.pdb 1 DIQMTQTTSSLSASLGDRVTFSCSASQD-I--S----N-YLNWYQQ---KPDGTIKLLIY 49 usage_00063.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQRGL--R----NVAVAWYQQ---KPGKAPKLLIY 50 usage_00070.pdb 1 --VMTQTPASLAVSLGQRATISCRASEN-V--DRYGNS-FMHWYQQ---KAGQPPKLLIY 51 usage_00085.pdb 1 -LVMTQTPSSLSASLGERVSLTCRASQD-I--G----N-NLNWIQQ---KPDGTIKRLIY 48 usage_00088.pdb 1 DIQMTQSPSSLSASLGDRVTITCQASRG-I--G----K-DLNWYQQ---KAGKAPKLLVS 49 usage_00090.pdb 1 DIELTQTPVSLAASLGDRVTISCRASQD-I--N----N-FLNWYQQ---KPDGTIKLLIY 49 usage_00114.pdb 1 -VVMTQTPASVSEPVGGTVTIKCQASED-I--S----R-YLVWYQQ---KPGQPPKRLIY 48 usage_00120.pdb 1 -IQMTQSPSSVSASVGDRVTITCRASQD-I--S----T-WLAWYQQ---KPGKAPKLLIY 48 usage_00133.pdb 1 --QLTQSPSFLSASVADRVTITCRASQA-V--R----S-SLAWYQQ---KPGKAPQLLIY 47 usage_00156.pdb 1 DIQMTQSPSTLSASVGDRVTITCSASSS-I--S------YMHWYQQ---KPGKAPKLLIY 48 usage_00175.pdb 1 -IVLTQSPASLAVSLGQRATISCRASKS-V--SSSVNS-YMHWYQQ---KPGQPPKLLIY 52 usage_00177.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQD-I--S----N-HLNWYQQ---KPDGTVKLLIY 49 usage_00190.pdb 1 -IQMTQSPSSLPASLGDRVTINCQASQD-I--S----N-YLNWYQQ---KPGKAPKLLIY 48 usage_00194.pdb 1 -LTLTQSPASLAVSLGQRATISCRASES-V--DGYGNS-FLHWFQQ---KPGQPPKLLIY 52 usage_00201.pdb 1 --QMTQSPSSLSASVGDRVTITCKASQN-I--D----K-YLNWYQQ---KPGKAPKLLIY 47 usage_00205.pdb 1 -QVLTQTPSSVSTAVGSAVTINCQSSQN-VYSN----N-NLAWFQQ---KPGQPPRLLIY 50 usage_00219.pdb 1 -IQMTQSPSSVSASVGDRVTITCQSSPS-V-WS----N-FLSWYQQ---KPGKAPKLLIY 49 tq g C s W qQ l usage_00003.pdb 50 Y------TSNLHSEV--PSRFSGS-GSGTDYSLT--- 74 usage_00017.pdb 50 S------ASFLYSGV--PSRFSGS-RSGTDFTLTISS 77 usage_00019.pdb 51 MASSHNK-ITWDEKLNSSKLFSAMRDTNNKYVLTLNK 86 usage_00044.pdb 48 Y------TSALQPGI--PSRFSGS-GSGRDYTFT--- 72 usage_00056.pdb 50 Y------TSSLRSGV--PSRFSGS-GSGTDYSLTINN 77 usage_00063.pdb 51 S------ASSLYSGV--PSRFSGS-RSGTDFTLTISS 78 usage_00070.pdb 52 R------ASNLESGI--PARFSGS-GSRTDFTLTINP 79 usage_00085.pdb 49 A------TSSLDSGV--PKRFSGS-RSGSDYSLTISS 76 usage_00088.pdb 50 D------ASTLEGGV--PSRFSGS-GFHQDFSLTISS 77 usage_00090.pdb 50 Y------TSRLHAGV--PSRFSGS-GSGTDYSLT--- 74 usage_00114.pdb 49 K------ASTLASGV--PSRFKGS-GSGTDFTLTISD 76 usage_00120.pdb 49 A------ASTLQSGV--PSRFSGS-GSGTDFSLTINS 76 usage_00133.pdb 48 S------ASTLENGV--SSRFSGS-GPGTEFTLT--- 72 usage_00156.pdb 49 T------TSNLASGV--PARFSGS-GSGTEFTLT--- 73 usage_00175.pdb 53 L------ASNLESGV--PARFSGS-GSGTDFTLNIHP 80 usage_00177.pdb 50 Y------ISRFHSGV--PSRFSGS-GSGTDYSLTISN 77 usage_00190.pdb 49 Y------TNKLADGV--PSRFSGS-GSGRDSSFTI-- 74 usage_00194.pdb 53 L------ASNLNSGV--PARFSGS-GSRTDFTLTIDP 80 usage_00201.pdb 48 N------TNNLQTGV--PSRFSGS-GSGTDFTFT--- 72 usage_00205.pdb 51 D------ASKLASGV--PSRFKGS-GSGTQFTFTI-- 76 usage_00219.pdb 50 E------ASKLTSGV--PSRFSGS-GSGTDFTLT--- 74 rF gs t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################