################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:22:05 2021 # Report_file: c_0143_17.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00020.pdb # 6: usage_00024.pdb # 7: usage_00054.pdb # 8: usage_00055.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00068.pdb # 12: usage_00069.pdb # 13: usage_00076.pdb # 14: usage_00078.pdb # 15: usage_00088.pdb # 16: usage_00103.pdb # 17: usage_00104.pdb # 18: usage_00112.pdb # 19: usage_00115.pdb # 20: usage_00116.pdb # 21: usage_00126.pdb # 22: usage_00139.pdb # 23: usage_00142.pdb # 24: usage_00145.pdb # 25: usage_00191.pdb # 26: usage_00195.pdb # 27: usage_00196.pdb # 28: usage_00254.pdb # 29: usage_00260.pdb # 30: usage_00290.pdb # 31: usage_00292.pdb # 32: usage_00295.pdb # 33: usage_00312.pdb # 34: usage_00313.pdb # 35: usage_00314.pdb # 36: usage_00319.pdb # 37: usage_00328.pdb # 38: usage_00329.pdb # 39: usage_00337.pdb # # Length: 116 # Identity: 23/116 ( 19.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/116 ( 33.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/116 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ELVMTQTPLSLPVSLGDQASISCRSSQSLLHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 59 usage_00003.pdb 1 ELVMTQTPLSLPVSLGDQASISCRSSQSLLHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 59 usage_00016.pdb 1 -VVMTQTPFSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00017.pdb 1 -VVMTQTPFSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00020.pdb 1 -IVMTQTPLSLSVTPGQPASISCKSSQSLLHT-DGTTYLYWYLQKPGQPPQLLIYEVSNR 58 usage_00024.pdb 1 DIELTQSPPSLPVSLGDQVSISCRSSQSLVSN-NRRNYLHWYLQKPGQSPKLVIYKVSNR 59 usage_00054.pdb 1 -IELTQSPPSLPVSLGDQVSISCRSSQSLVSN-NRRNYLHWYLQKPGQSPKLVIYKVSNR 58 usage_00055.pdb 1 -LVMTQSPLSLPVSLGDQASISCRPSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYRVSNR 58 usage_00066.pdb 1 -VVMTQIPLSLPVNLGDQASISCRSSQSLIHS-NGNTYLHWYLQKPGQSPKLLMYKVSNR 58 usage_00067.pdb 1 -VVMTQIPLSLPVNLGDQASISCRSSQSLIHS-NGNTYLHWYLQKPGQSPKLLMYKVSNR 58 usage_00068.pdb 1 ---MTQIPLSLPVNLGDQASISCRSSQSLIHS-NGNTYLHWYLQKPGQSPKLLMYKVSNR 56 usage_00069.pdb 1 -VVMTQIPLSLPVNLGDQASISCRSSQSLIHS-NGNTYLHWYLQKPGQSPKLLMYKVSNR 58 usage_00076.pdb 1 -VVMTQSPLSLPVTLGQPASISCRSSQSLIYS-DGNAYLHWFLQKPGQSPRLLIYKVSNR 58 usage_00078.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQNLVHS-DGKTYLHWFLQKPGQSPTLLIYKVSNR 58 usage_00088.pdb 1 -VVMTQSPEFLAVSLGERATLECKSSHSLLYAPYDKDALVWYQQKPGQPPKLLLDWASSR 59 usage_00103.pdb 1 -VVMTQSPLSLPVSLGDQASISCRSSQSLVHS-NGNNYLHWYLQKSGQAPKLLIYKVSNR 58 usage_00104.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPNLLIYKVSNR 58 usage_00112.pdb 1 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPNLLIYKVSNR 59 usage_00115.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPNLLIYKVSNR 58 usage_00116.pdb 1 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPNLLIYKVSNR 59 usage_00126.pdb 1 -IQLTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00139.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLIHT-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00142.pdb 1 -IVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTR 59 usage_00145.pdb 1 IQMT-QSPASLAVSPGQRATITCRAESV-SNY--GINFINWFQQKPGQPPKLLIYTASNK 56 usage_00191.pdb 1 --VMTQTPLSLSVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSSR 57 usage_00195.pdb 1 --VMTQTPLSLSVTPGQPASISCKSSESLRQS-NGKTSLYWYRQKPGQSPQLLVFEVSNR 57 usage_00196.pdb 1 -IVMTQTPLSLSVDPGQPASISCKSSQSLRQS-NGKTSLYWYQQKPGQSPQLLIFEVSNR 58 usage_00254.pdb 1 -IVMTQSPLSLPVTLGQPASISCRSSQSLVHS-DGNTYLNWFQQRPGQSPRRLIYKVSDR 58 usage_00260.pdb 1 -LVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTR 59 usage_00290.pdb 1 -LVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKFLIYKVSNR 58 usage_00292.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHR-NGNTYLHWYLQKPGQSPKLLIHKVSNR 58 usage_00295.pdb 1 --VMTQTPLSLPVSLGDQASISCRSSQSLVHR-NGNTYLHWYLQKPGQSPKLLIHKVSNR 57 usage_00312.pdb 1 --VMTQSPLSLPVTPGEAASISCRSSQSLLHT-NGFQYLDWYLQKPGQSPQLLIYLGSNR 57 usage_00313.pdb 1 -IVMTQSPLSLPVTPGEAASISCRSSQSLLHT-NGFQYLDWYLQKPGQSPQLLIYLGSNR 58 usage_00314.pdb 1 -IVMTQSPLSLPVTPGEAASISCRSSQSLLHT-NGFQYLDWYLQKPGQSPQLLIYLGSNR 58 usage_00319.pdb 1 -VVMTQSPLSLPVSLGDQASISCRSSQSLLHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00328.pdb 1 -LVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00329.pdb 1 -LVMTQTPLSLPVSLGDQASISCRSSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYKVSNR 58 usage_00337.pdb 1 -LVMTQSPLSLPVSLGDQASISCRPSQSLVHS-NGNTYLHWYLQKPGQSPKLLIYRVSNR 58 Q P sL V G C s l W QkpGQ P S r usage_00002.pdb 60 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQVTHVPPTFGGGTKLEI--- 111 usage_00003.pdb 60 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQVTHVPPTFGGGTKLEI--- 111 usage_00016.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEI--- 110 usage_00017.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEI--- 110 usage_00020.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDVGIYYCMQNIQLPWTFGQGTKVEI--- 110 usage_00024.pdb 60 FSGVPDRFSGSGSG-TDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEI--- 111 usage_00054.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEI--- 110 usage_00055.pdb 59 FSGVPDRFSGSGSG-TAFTLKISRVEAEDLGVYFCSQGTHVPYTFGGGTKLEL--- 110 usage_00066.pdb 59 FYGVPDRFSGSGSG-TDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEI--- 110 usage_00067.pdb 59 FYGVPDRFSGSGSG-TDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEI--- 110 usage_00068.pdb 57 FYGVPDRFSGSGSG-TDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEI--- 108 usage_00069.pdb 59 FYGVPDRFSGSGSG-TDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEI--- 110 usage_00076.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDVGVYYCSQSTHVPWTFGQGTKVEI--- 110 usage_00078.pdb 59 FSGVPDRFSGSGSG-TDFILKISRVEAEDLGVYFCSQSTHVPLTFGCGTKLEL--- 110 usage_00088.pdb 60 RSGVSDRFSATSASGRYFTLTISNFRADDVATYYCQQTRWTPPTFGGGTKVDL--- 112 usage_00103.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPLTFGGGTKLEI--- 110 usage_00104.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPTFGGGTKLEI---- 109 usage_00112.pdb 60 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPTFGGGTKLEI---- 110 usage_00115.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPTFGGGTKLEI---- 109 usage_00116.pdb 60 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPTFGGGTKLEI---- 110 usage_00126.pdb 59 FSGVPDRFSGSGSG-TDFTLKISSVEAEDLGVYFCSQSTHVPTFGGGTKLEI---- 109 usage_00139.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLEI-- 111 usage_00142.pdb 60 ESGVPDRFTGSGSG-TDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEI---- 110 usage_00145.pdb 57 GTGVPARFSGSGSG-TDFTLTINPVEAEDTANYFCQQTKEVPYTFGGGTKLE---- 107 usage_00191.pdb 58 FSGFPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPFTFGSGTKLEI--- 109 usage_00195.pdb 58 FSGVSDRFVGSGSG-TDFTLRISRVEAEDVGFYYCMQSKDFPLTFGGGTKVDL--- 109 usage_00196.pdb 59 FSGVSDRFVGSGSG-TDFTLRISRVEAEDVGFYYCMQSKDFPLTFGGGTKVDL--- 110 usage_00254.pdb 59 DSGVPDRFSGSGSG-TDFTLKISRVEAEDVGVYYCMQGTHWPPYTFGQGTKVEI-- 111 usage_00260.pdb 60 ESGVPDRFTGSGSG-TDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEI--- 111 usage_00290.pdb 59 FSGVPDRFSGSGSG-TDFILKISRVEAEDLGVYFCSQSTHFFPTFGGGTKLEIKRT 113 usage_00292.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLEL-- 111 usage_00295.pdb 58 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLEL-- 110 usage_00312.pdb 58 ATGVPHRFSGSGSG-TEFTLKISRVEAEDVGVYYCMQAKESPTFGQGTKVEI---- 108 usage_00313.pdb 59 ATGVPHRFSGSGSG-TEFTLKISRVEAEDVGVYYCMQAKESPTFGQGTKVEI---- 109 usage_00314.pdb 59 ATGVPHRFSGSGSG-TEFTLKISRVEAEDVGVYYCMQAKESPTFGQGTKVEI---- 109 usage_00319.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDI-- 111 usage_00328.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPPTFGGGTKLEI--- 110 usage_00329.pdb 59 FSGVPDRFSGSGSG-TDFTLKISRVEAEDLGVYFCSQSTHVPPTFGGGTKLEI--- 110 usage_00337.pdb 59 FSGVPDRFSGSGSG-TAFTLKISRVEAEDLGVYFCSQGTHVPYTFGGGTKLEL--- 110 Gv RF gsgsg t F L Is v AeD Y C Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################