################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:36 2021 # Report_file: c_0516_24.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00070.pdb # 2: usage_00071.pdb # 3: usage_00164.pdb # 4: usage_00228.pdb # 5: usage_00229.pdb # 6: usage_00240.pdb # 7: usage_00243.pdb # 8: usage_00279.pdb # # Length: 90 # Identity: 15/ 90 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 90 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 90 ( 17.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 -GHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELV 59 usage_00071.pdb 1 -GHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELV 59 usage_00164.pdb 1 --HEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELV 58 usage_00228.pdb 1 --MATMLS----GAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVV 54 usage_00229.pdb 1 T----MLS----GAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVV 52 usage_00240.pdb 1 --MATMLS----GAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVV 54 usage_00243.pdb 1 --IRTIIG----GAQIIDL--LVIDVTKG--QTQSAECLVIGQIA-CQKLVVVLNKIDLL 49 usage_00279.pdb 1 --MATMLS----GAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVV 54 GA lmDg LV aanep pQtrEh al Ii kn ii qNK v usage_00070.pdb 60 DKEKALENYRQ--IKEFIKGTVAENAPIIP 87 usage_00071.pdb 60 DKEKALENYRQ--IKEFIKGTVAENAPIIP 87 usage_00164.pdb 59 DKEKALENYRQ--IKEFIEGTVAENAPIIP 86 usage_00228.pdb 55 SKEEALSQYRQ--IKQFTKGTWAENVPIIP 82 usage_00229.pdb 53 SKEEALSQYRQ--IKQFTKGTWAENVPIIP 80 usage_00240.pdb 55 SKEEALSQYRQ--IKQFTKGTWAENVPIIP 82 usage_00243.pdb 50 PEGKRQAAIDKTKKQKTLENTKFRGAPIIP 79 usage_00279.pdb 55 SKEEALSQYRQ--IKQFTKGTWAENVPIIP 82 ke al yrq ik f gT aen PIIP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################