################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:34 2021 # Report_file: c_0783_27.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00090.pdb # 3: usage_00093.pdb # 4: usage_00095.pdb # 5: usage_00096.pdb # 6: usage_00097.pdb # 7: usage_00144.pdb # 8: usage_00147.pdb # 9: usage_00148.pdb # # Length: 71 # Identity: 1/ 71 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 71 ( 8.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 71 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----TQLCMSLSGR---P--SNFGTTFHNYLYDKLGLNFIYKAF-TT---QDIEHAIKGV 47 usage_00090.pdb 1 AQT----TRINISTAQNSHQGVAIDTFAKEVEKRTGGRYKVQTFYN-AALGAERESVEAV 55 usage_00093.pdb 1 --T----TRINISTAQNSHQGVAIDTFAKEVEKRTGGRYKVQTFYN-AALGAERESVEAV 53 usage_00095.pdb 1 -------LKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPS-SALGGEREMIESV 52 usage_00096.pdb 1 -------LKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPS-SALGGEREMIESV 52 usage_00097.pdb 1 -----TTMKISISTSQNSHQGVAIDTFAKEVEKRTGGRYKVQTFYS-GALGGERESIEAV 54 usage_00144.pdb 1 ---YKLTLKLSHVFSPAEQLSKSMDAVAESIYEKTDGAINIQTFPQ-AQLPAYKEGVEQV 56 usage_00147.pdb 1 -------LKMAYALSTSSHYGAGAEAFAKSIEGASGGKYKVQQFAN-SALGGEREVIEGL 52 usage_00148.pdb 1 -------LKMAYALSTSSHYGAGAEAFAKSIEGASGGKYKVQQFAN-SALGGEREVIEGL 52 f q F e e usage_00002.pdb 48 RALGIRGCAVS 58 usage_00090.pdb 56 QLGTHELTFS- 65 usage_00093.pdb 54 QLGTHELTFS- 63 usage_00095.pdb 53 QLGTQDLVN-- 61 usage_00096.pdb 53 QLGTQDLVNT- 62 usage_00097.pdb 55 QLGTQELAFS- 64 usage_00144.pdb 57 VRGAKFISVE- 66 usage_00147.pdb 53 QIGTIDLAIV- 62 usage_00148.pdb 53 QIGTIDLAIV- 62 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################