################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:35 2021 # Report_file: c_0656_44.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00085.pdb # 2: usage_00087.pdb # 3: usage_00088.pdb # 4: usage_00089.pdb # 5: usage_00090.pdb # 6: usage_00091.pdb # 7: usage_00092.pdb # 8: usage_00093.pdb # 9: usage_00659.pdb # 10: usage_00880.pdb # 11: usage_01204.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 45 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 45 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCMSVITA 40 usage_00087.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCMSVITA 40 usage_00088.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCMSVITA 40 usage_00089.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCSVITA- 39 usage_00090.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCSVITA- 39 usage_00091.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCSVITA- 39 usage_00092.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCSVITA- 39 usage_00093.pdb 1 ---WSVSWNLT-G-TILSSAGDDGKVRLWKATYSNEFKCSVITA- 39 usage_00659.pdb 1 DVLWRASWSLS-G-NVLALSGGDNKVTLWKENLEGKWEPAGEVH- 42 usage_00880.pdb 1 ---WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV- 41 usage_01204.pdb 1 ----YSMVEF--N-GKLLASIN-STVRLYEWTTEKELRTECNHYN 37 w L kV lwk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################