################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:59 2021 # Report_file: c_1297_145.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00171.pdb # 2: usage_01041.pdb # 3: usage_01652.pdb # 4: usage_03113.pdb # 5: usage_03114.pdb # 6: usage_03115.pdb # 7: usage_03116.pdb # 8: usage_03117.pdb # 9: usage_03118.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 36 ( 2.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 36 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 RELAEL-----THRTLEMKDG------KVVGEITRV 25 usage_01041.pdb 1 -QRDLAN------GQCIVVP-RDV-GKDQKRVIP-- 25 usage_01652.pdb 1 -EDFLREQIRDA-RYAVIRI---PG--QPVVEVG-- 27 usage_03113.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 usage_03114.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 usage_03115.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 usage_03116.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 usage_03117.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 usage_03118.pdb 1 AKDLARSLA--VISVRVVEVIPGK---TTVGIEI-P 30 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################