################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:53 2021 # Report_file: c_0866_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00022.pdb # 5: usage_00041.pdb # 6: usage_00061.pdb # 7: usage_00062.pdb # 8: usage_00136.pdb # 9: usage_00156.pdb # 10: usage_00157.pdb # 11: usage_00176.pdb # 12: usage_00177.pdb # # Length: 89 # Identity: 55/ 89 ( 61.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 89 ( 62.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 89 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 ----------------DIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKI 44 usage_00014.pdb 1 ----------------DIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKI 44 usage_00015.pdb 1 -ADSVQAKVEMLDNLLDIEVAYSLLR----S-SKDPIDVNYEKLKTDIKVVDRDSEEAEI 54 usage_00022.pdb 1 ----------------DIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKI 44 usage_00041.pdb 1 -ADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 59 usage_00061.pdb 1 --DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 58 usage_00062.pdb 1 -ADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 59 usage_00136.pdb 1 ----------------DIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKI 44 usage_00156.pdb 1 NADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 60 usage_00157.pdb 1 NADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 60 usage_00176.pdb 1 NADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 60 usage_00177.pdb 1 NADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEI 60 DIEVAYSLLR d KDPID NYEKL TDIKVVD DSEEA I usage_00013.pdb 45 IKQYVKNTHAATHNAYDLKVVEIFRIERE 73 usage_00014.pdb 45 IKQYVKNTHAATHNAYDLKVVEIFRIERE 73 usage_00015.pdb 55 IRKYVKNTHATTHNAYDLEVIDIFKIERE 83 usage_00022.pdb 45 IKQYVKNTHAATHNAYDLKVVEIFRIERE 73 usage_00041.pdb 60 IRKYVKNTHATTHNAYDLEVIDIFKIERE 88 usage_00061.pdb 59 IRKYVKNTHATTHNAYDLEVIDIFKIERE 87 usage_00062.pdb 60 IRKYVKNTHATTHNAYDLEVIDIFKIERE 88 usage_00136.pdb 45 IKQYVKNTHAATHNAYDLKVVEIFRIERE 73 usage_00156.pdb 61 IRKYVKNTHATTHNAYDLEVIDIFKIERE 89 usage_00157.pdb 61 IRKYVKNTHATTHNAYDLEVIDIFKIERE 89 usage_00176.pdb 61 IRKYVKNTHATTHNAYDLEVIDIFKIERE 89 usage_00177.pdb 61 IRKYVKNTHATTHNAYDLEVIDIFKIERE 89 I YVKNTHA THNAYDL V IF IERE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################