################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:26 2021 # Report_file: c_1382_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00309.pdb # 4: usage_00310.pdb # 5: usage_00311.pdb # 6: usage_00312.pdb # 7: usage_01723.pdb # 8: usage_01729.pdb # 9: usage_01730.pdb # # Length: 74 # Identity: 69/ 74 ( 93.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 74 ( 93.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 74 ( 6.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYI--LCTSVQILAQEADVTAEAAKRVLFVMCREWE 58 usage_00003.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYT-ILCTSVQILAQEADVTAEAAKRVLFVMCREWE 59 usage_00309.pdb 1 -REIDANCSKHLSVVNDIYSYEKELYT--LCTSVQILAQEADVTAEAAKRVLFVMCREWE 57 usage_00310.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYI--LCTSVQILAQEADVTAEAAKRVLFVMCREWE 58 usage_00311.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYT-ILCTSVQILAQEADVTAEAAKRVLFVMCREWE 59 usage_00312.pdb 1 VREIDANCSKHLSVVNDIYSYEKELY---LCTSVQILAQEADVTAEAAKRVLFVMCREWE 57 usage_01723.pdb 1 -REIDANCSKHLSVVNDIYSYEKELYTS-LCTSVQILAQEADVTAEAAKRVLFVMCREWE 58 usage_01729.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYTSILCTSVQILAQEADVTAEAAKRVLFVMCREWE 60 usage_01730.pdb 1 VREIDANCSKHLSVVNDIYSYEKELYT--LCTSVQILAQEADVTAEAAKRVLFVMCREWE 58 REIDANCSKHLSVVNDIYSYEKELY LCTSVQILAQEADVTAEAAKRVLFVMCREWE usage_00002.pdb 59 LRHQLLVARLSAEG 72 usage_00003.pdb 60 LRHQLLVARLSAE- 72 usage_00309.pdb 58 LRHQLLVARLSAE- 70 usage_00310.pdb 59 LRHQLLVARLSAEG 72 usage_00311.pdb 60 LRHQLLVARLSAEG 73 usage_00312.pdb 58 LRHQLLVARLSAEG 71 usage_01723.pdb 59 LRHQLLVARLSAEG 72 usage_01729.pdb 61 LRHQLLVARLSAEG 74 usage_01730.pdb 59 LRHQLLVARLSAEG 72 LRHQLLVARLSAE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################