################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:42 2021 # Report_file: c_1148_67.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00309.pdb # 2: usage_00310.pdb # 3: usage_01096.pdb # 4: usage_01164.pdb # 5: usage_01989.pdb # 6: usage_02877.pdb # 7: usage_02878.pdb # 8: usage_02880.pdb # 9: usage_02881.pdb # 10: usage_02882.pdb # 11: usage_02883.pdb # 12: usage_03057.pdb # 13: usage_03058.pdb # # Length: 48 # Identity: 0/ 48 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 48 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 48 ( 87.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00309.pdb 1 -------YTLHVIEM----KHD-G-IRKIGYWNEDDKFVPA------- 28 usage_00310.pdb 1 ------NYTLHVIEM----KHD-G-IRKIGYWNEDDKFVPA------- 29 usage_01096.pdb 1 DMYYMF-VAALRMIR-------P--WNKWICVWG-------------- 24 usage_01164.pdb 1 -------LETITLQKWGSWNPG-H-IH-------EILSIRIY------ 26 usage_01989.pdb 1 -----------NYKL----NQY-G-LFKN-------------QTLVPL 18 usage_02877.pdb 1 ------NYTIDVYEM--------KGSRKAGYWNEYERFVPF------- 27 usage_02878.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_02880.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_02881.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_02882.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_02883.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_03057.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 usage_03058.pdb 1 ------NYTIDVYEM----KVS-G-SRKAGYWNEYERFVPF------- 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################