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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:31:34 2021
# Report_file: c_1281_62.html
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#====================================
# Aligned_structures: 6
#   1: usage_00587.pdb
#   2: usage_00588.pdb
#   3: usage_00589.pdb
#   4: usage_00784.pdb
#   5: usage_00785.pdb
#   6: usage_00786.pdb
#
# Length:         68
# Identity:       27/ 68 ( 39.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     27/ 68 ( 39.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/ 68 ( 60.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00587.pdb         1  --QLFRFSNKAYLRQLQDNTPLAL---ALLAKLSTRL----H------------------   33
usage_00588.pdb         1  --QLFRFSNKAYLRQLQDNTPLAL---ALLAKLSTRLHQRI-------------------   36
usage_00589.pdb         1  PSQLFRFSNKAYLRQLQDNTPLAL---ALLAKLSTR----L-------------------   34
usage_00784.pdb         1  --QLFRFSNKAYLRQLQDNTPLAL---ALLAKLSTRLHQRIDEIETLSLKNATHRVVRYL   55
usage_00785.pdb         1  --QLFRFSNKAYLRQLQDNTPLALALL---AKLST-RLHQRIDEIETLSLKNATHRVVRY   54
usage_00786.pdb         1  --QLFRFSNKAYLRQLQDNTPLAL---ALLAKLSTRLHQRIDEIETLSLKNATHRVVRY-   54
                             QLFRFSNKAYLRQLQDNTPLAL      AKLST                         

usage_00587.pdb            --------     
usage_00588.pdb        37  -----DE-   38
usage_00589.pdb            --------     
usage_00784.pdb        56  LTLAAH--   61
usage_00785.pdb        55  LLTLAAHA   62
usage_00786.pdb            --------     
                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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