################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:03 2021 # Report_file: c_0166_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # # Length: 142 # Identity: 136/142 ( 95.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 136/142 ( 95.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/142 ( 4.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 FVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDS 60 usage_00009.pdb 1 FVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDS 60 usage_00015.pdb 1 FVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQK-N-RIISAKDHGDS 58 usage_00016.pdb 1 FVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQK-N-RIISAKDHGDS 58 FVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQK N RIISAKDHGDS usage_00008.pdb 61 FRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMD 120 usage_00009.pdb 61 FRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMD 120 usage_00015.pdb 59 FRTLESGRAVAF--DDALLAGERAKAKKPDNWDIVGKPQSQEAYGC-LRKDDPQFKKL-D 114 usage_00016.pdb 59 FRTLESGRAVAF--DDALLAGERAKAKKPDNWDIVGKPQSQEAYGC-LRKDDPQFKKL-D 114 FRTLESGRAVAF DDALLAGERAKAKKPDNWDIVGKPQSQEAYGC LRKDDPQFKKL D usage_00008.pdb 121 DTIAQVQTSGEAEKWFDKWFKN 142 usage_00009.pdb 121 DTIAQVQTSGEAEKWFDKWFKN 142 usage_00015.pdb 115 DTIAQVQTSGEAEKWFDKWFKN 136 usage_00016.pdb 115 DTIAQVQTSGEAEKWFDKWFKN 136 DTIAQVQTSGEAEKWFDKWFKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################