################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:47 2021 # Report_file: c_0300_78.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00100.pdb # 2: usage_00223.pdb # 3: usage_00338.pdb # 4: usage_00504.pdb # # Length: 105 # Identity: 42/105 ( 40.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/105 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/105 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG--V--EYVGDSRSVDF 56 usage_00223.pdb 1 ESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSF 60 usage_00338.pdb 1 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG--V--EYVGDSRSVDF 56 usage_00504.pdb 1 ETLLIHSGSGGVGQAAIAIALSLGCRVFTTVGSAEKRAYLQARFPQLDSTSFANSR--SF 58 E vLIHS GGVG AA IA G R TT GS KR L SR F usage_00100.pdb 57 ADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIE---- 96 usage_00223.pdb 61 EQHVLRHTAGKGVDLVLNSLAEE-KLQASVRCLAQHGRFLEIGKF 104 usage_00338.pdb 57 ADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIE---- 96 usage_00504.pdb 59 EQHVLWHTGGKGVDLVLN-----EKLQASVRCLATHGRFLEI--- 95 L T G GVD VLN Q V LA GRF E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################