################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:59 2021 # Report_file: c_1014_54.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00119.pdb # 2: usage_00120.pdb # 3: usage_00249.pdb # 4: usage_00369.pdb # 5: usage_00370.pdb # 6: usage_00439.pdb # 7: usage_00440.pdb # # Length: 52 # Identity: 21/ 52 ( 40.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 52 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 52 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 ---SVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 49 usage_00120.pdb 1 ---SVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 49 usage_00249.pdb 1 FGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGT 52 usage_00369.pdb 1 ---SVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 49 usage_00370.pdb 1 ---SVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 49 usage_00439.pdb 1 ---SVSHTTRQPRPGEVHGEHYFFVNHDEFKE-ISRDAFLEHAEVFGNYYGT 48 usage_00440.pdb 1 ---SVSHTTRQPRPGEVHGEHYFFVNHDEFKE-ISRDAFLEHAEVFGNYYGT 48 SV TTR PR GEv G Y FV defk I F E A GNyYG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################