################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:17 2021 # Report_file: c_0811_12.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00234.pdb # 2: usage_00240.pdb # 3: usage_00241.pdb # 4: usage_00255.pdb # 5: usage_00371.pdb # 6: usage_00386.pdb # 7: usage_00407.pdb # 8: usage_00460.pdb # 9: usage_00560.pdb # 10: usage_00591.pdb # 11: usage_00631.pdb # 12: usage_00632.pdb # 13: usage_00634.pdb # # Length: 59 # Identity: 15/ 59 ( 25.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 59 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 59 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 50 usage_00240.pdb 1 TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 58 usage_00241.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 50 usage_00255.pdb 1 -EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 56 usage_00371.pdb 1 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP-LGDIKIVDFGMSRKI-- 56 usage_00386.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_00407.pdb 1 --------LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 51 usage_00460.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 51 usage_00560.pdb 1 --AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-----EQLKLIDLGAVSRI-- 50 usage_00591.pdb 1 -EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--- 55 usage_00631.pdb 1 --------LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE- 50 usage_00632.pdb 1 --------LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE- 50 usage_00634.pdb 1 -ENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP-LGDIKIVDFGMSRKI-- 55 kqIL gv YLH i h DLKP NI L iK DfG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################