################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:25 2021 # Report_file: c_0720_25.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00064.pdb # 2: usage_00065.pdb # 3: usage_00102.pdb # 4: usage_00223.pdb # 5: usage_00250.pdb # 6: usage_00436.pdb # # Length: 65 # Identity: 9/ 65 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 65 ( 56.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 65 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 EIVENFILVGN---DLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTI 57 usage_00065.pdb 1 ---ENFILVGN---DLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTI 54 usage_00102.pdb 1 ----TFTLVAK---DLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTV 53 usage_00223.pdb 1 ----DFTLVAK---DLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTV 53 usage_00250.pdb 1 ---PEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFT--EIIAFSDQVEEFN-SRNCQ 54 usage_00436.pdb 1 -KAQTFTLVAK---DLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTV 56 F lv dl dv L fa KrkVLnifPsidT ca svrkfnq a Nt usage_00064.pdb 58 VLC-- 60 usage_00065.pdb 55 VLC-- 57 usage_00102.pdb 54 VLS-- 56 usage_00223.pdb 54 VLC-- 56 usage_00250.pdb 55 VIACS 59 usage_00436.pdb 57 VLC-- 59 Vl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################