################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:48 2021 # Report_file: c_1372_57.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00009.pdb # 2: usage_00205.pdb # 3: usage_00349.pdb # 4: usage_00471.pdb # 5: usage_00514.pdb # 6: usage_00931.pdb # 7: usage_01074.pdb # 8: usage_01081.pdb # 9: usage_01217.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 47 ( 6.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 47 ( 53.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -TPAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 35 usage_00205.pdb 1 -TPAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 35 usage_00349.pdb 1 ----HPYGCRVIQRILEHCT--------A-EQTTPILDELHEH---- 30 usage_00471.pdb 1 T--PAKQIKRKIQEFHRT-L-----NFSSATDLLCQH------SLFK 33 usage_00514.pdb 1 -TPAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 35 usage_00931.pdb 1 --PAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 34 usage_01074.pdb 1 -TPAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 35 usage_01081.pdb 1 --IPAFRRHEIANFLKKRKTPKNAD-----ELIFKYV---------- 30 usage_01217.pdb 1 -TPAMKQIKRKIQEFHRTML-----NFSSATDLLCQH------SLFK 35 r iq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################