################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:25 2021 # Report_file: c_1101_16.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00041.pdb # 2: usage_00165.pdb # 3: usage_00295.pdb # 4: usage_00296.pdb # 5: usage_00299.pdb # 6: usage_00355.pdb # 7: usage_00366.pdb # 8: usage_00367.pdb # 9: usage_00522.pdb # 10: usage_00524.pdb # 11: usage_00525.pdb # 12: usage_00529.pdb # 13: usage_00567.pdb # 14: usage_00629.pdb # 15: usage_00705.pdb # 16: usage_00761.pdb # 17: usage_00770.pdb # # Length: 128 # Identity: 22/128 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/128 ( 34.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/128 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 -PEDAVKYRQSALTLMASHFGRMAPVVKGQAPYDAAQIKANVEVLKTLTALP-WAAFGAG 58 usage_00165.pdb 1 DTKEVLEAREAYFKSLGGSMKAMTGVA-K--AFDAEAAKVEAAKLEKILATDVAPLFPAG 57 usage_00295.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00296.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00299.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00355.pdb 1 -PEDAVKYRQSAGTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00366.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAVQIKANVEVLKTLSALP-WAAFGPG 58 usage_00367.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00522.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00524.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00525.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00529.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 58 usage_00567.pdb 1 -PADAIEYRQAAFGLIAYNFGDMGAMLKGKKPFDAAVFSTRADNVAALSKIP-HEGFIAG 58 usage_00629.pdb 1 -PADAIEYRQAAFGLIAYNFGDMGAMLKGKKPFDAAVFSTRADNVAALSKIP-HEGFIAG 58 usage_00705.pdb 1 --EDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 57 usage_00761.pdb 1 --EDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALP-WAAFGPG 57 usage_00770.pdb 1 -PEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAVQIKANVEVLKTLSALP-WAAFGPG 58 da yRq a l a fg M g p DA l p F G usage_00041.pdb 59 TEG------GDARPEIWSDAAGFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00165.pdb 58 TSSTDLPGQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGTC 117 usage_00295.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00296.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00299.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00355.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00366.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00367.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00522.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00524.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00525.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00529.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 usage_00567.pdb 59 SDK----GDTEALAKIWQDKADFDSKMTAFQDNAAALAVAAKSSDQNNIKQAFANTGKSC 114 usage_00629.pdb 59 SDK----GDTEALAKIWQDKADFDSKMTAFQDNAAALAVAAKSSDQNNIKQAFANTGKSC 114 usage_00705.pdb 58 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 111 usage_00761.pdb 58 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 111 usage_00770.pdb 59 TEG------GDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASC 112 A IW d a F K Afqdn l AA D Af G sC usage_00041.pdb 113 KACHDS-- 118 usage_00165.pdb 118 KACHDDY- 124 usage_00295.pdb 113 KACHDAYF 120 usage_00296.pdb 113 KACHDA-- 118 usage_00299.pdb 113 KACHDA-- 118 usage_00355.pdb 113 KACHDA-- 118 usage_00366.pdb 113 KACHD--- 117 usage_00367.pdb 113 KACHDA-- 118 usage_00522.pdb 113 KACHDA-- 118 usage_00524.pdb 113 KACHDA-- 118 usage_00525.pdb 113 KACHDAYR 120 usage_00529.pdb 113 KACHDA-- 118 usage_00567.pdb 115 KGCHDV-- 120 usage_00629.pdb 115 KGCHDV-- 120 usage_00705.pdb 112 KACHDA-- 117 usage_00761.pdb 112 KACHDA-- 117 usage_00770.pdb 113 KACHDAYR 120 K CHD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################