################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:58 2021 # Report_file: c_1258_12.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00043.pdb # 7: usage_00072.pdb # 8: usage_00141.pdb # 9: usage_00208.pdb # 10: usage_00322.pdb # # Length: 45 # Identity: 0/ 45 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 45 ( 4.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 45 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 PVVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 39 usage_00039.pdb 1 -VVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 38 usage_00040.pdb 1 -VVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 38 usage_00041.pdb 1 PVVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 39 usage_00042.pdb 1 -VVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 38 usage_00043.pdb 1 -VVEQPTRRIGQEAMRMLIHMIEG-T---G-NATEMRLQTRFVT- 38 usage_00072.pdb 1 -TIKQDFRLLGQTSVDRLLQLSQG-Q---A-VKGNQLLPVSLVK- 38 usage_00141.pdb 1 --IHQPKDSLGETAFNMLLDRIVNKR---E-EPQSIEVHPRL--- 36 usage_00208.pdb 1 --VHIPTAELTQNAVRWLINQCYG-T---KWEI-FREFPVTVSRA 38 usage_00322.pdb 1 -TVEPGRHDIARAAVTLSERIADA-GTGAI-EPRLTAPEFRLVV- 41 a l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################