################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:47 2021 # Report_file: c_0300_58.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00105.pdb # 2: usage_00157.pdb # 3: usage_00534.pdb # 4: usage_00535.pdb # # Length: 145 # Identity: 23/145 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/145 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/145 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQID 60 usage_00157.pdb 1 -RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCD 57 usage_00534.pdb 1 -RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGS--DLVVKCD 57 usage_00535.pdb 1 -RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGS--DLVVKCD 57 r litGvAn rSIAyGiAk hreGA LaFTY kl krv e a gs d v cD usage_00105.pdb 61 VQSDEEVINGFEQIGKDVGNIDGVYHS-I----------------------QDISS-YSL 96 usage_00157.pdb 58 VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSF 117 usage_00534.pdb 58 VSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID-TSREGFKIAMDISVYSL 116 usage_00535.pdb 58 VSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID-TSREGFKIAMDISVYSL 116 V De i n l wg D vHS a diS YSl usage_00105.pdb 97 TIVAHEAKKLMPEGGSIVATT-YL- 119 usage_00157.pdb 118 VAMAKACRSMLNPG-SALLTLSY-L 140 usage_00534.pdb 117 IALTRELLPLMEGRNGAIVTL---- 137 usage_00535.pdb 117 IALTRELLPLMEGRNGAIVTL---- 137 a e lm a Tl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################