################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:59 2021 # Report_file: c_0407_19.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00040.pdb # 2: usage_00053.pdb # 3: usage_00054.pdb # # Length: 78 # Identity: 32/ 78 ( 41.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/ 78 ( 91.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 78 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 -PSLSAQPGPTVQAGENVTLSCSSRSSYDMYHLSREGEAHERR-LPAVRSINGTFQADFP 58 usage_00053.pdb 1 -PSLSVQPGPIVAPEETLTLQCGSDAGYNRFVLYKDGERDFLQLAGAQPQ-AGLSQANFT 58 usage_00054.pdb 1 KPSLSVQPGPIVAPEETLTLQCGSDAGYNRFVLYKDGERDFLQLAGAQPQ-AGLSQANFT 59 PSLSvQPGPiVapeEtlTLqCgSdagYnrfvLykdGErdflq agAqpq aGlsQAnFt usage_00040.pdb 59 LGPATH--GGTYRCFG-- 72 usage_00053.pdb 59 LGPVSRSYGGQYRCYGAH 76 usage_00054.pdb 60 LGPVSRSYGGQYRCYGAH 77 LGPvsr GGqYRCyG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################