################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:52 2021 # Report_file: c_1487_386.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00998.pdb # 2: usage_04481.pdb # 3: usage_04482.pdb # 4: usage_04689.pdb # 5: usage_04690.pdb # # Length: 45 # Identity: 1/ 45 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 45 ( 40.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 45 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00998.pdb 1 CMDYIKGRCMREKCKYFH-----------PPAHLQAKIKAAQH-- 32 usage_04481.pdb 1 -IAFLND-----------QAMYEQGRLLRNTERGKLAAEDA---- 29 usage_04482.pdb 1 -IAFLND-----------QAMYEQGRLLRNTERGKLAAEDANLSS 33 usage_04689.pdb 1 SIAFLND-----------QAMYEQGRLLRNTERGKLAAEDANL-- 32 usage_04690.pdb 1 SIAFLND-----------QAMYEQGRLLRNTERGKLAAEDANL-- 32 iaflnd ntergklaaedA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################