################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:50:51 2021 # Report_file: c_0048_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00016.pdb # 2: usage_00052.pdb # 3: usage_00101.pdb # 4: usage_00102.pdb # 5: usage_00103.pdb # 6: usage_00132.pdb # 7: usage_00145.pdb # 8: usage_00146.pdb # # Length: 231 # Identity: 50/231 ( 21.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/231 ( 32.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/231 ( 14.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 GSALITGGLGAVGAQVARWLAEIGAERIVLTSRR-GNQAAGAA-ELEAELRALGAQVSIV 58 usage_00052.pdb 1 GTTLVTGGSGTLAPHLARWLAEQGAEHLVLVSRR-GPEAPGAA-ELRAELAERGTETTLA 58 usage_00101.pdb 1 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR-GADAPGAA-ELRAELEQLGVRVTIA 58 usage_00102.pdb 1 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR-GADAPGAA-ELRAELEQLGVRVTIA 58 usage_00103.pdb 1 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR-GADAPGAA-ELRAELEQLGVRVTIA 58 usage_00132.pdb 1 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR-GADAPGAA-ELRAELEQLGVRVTIA 58 usage_00145.pdb 1 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPS-----GLA-GLVAELADLGATATVV 54 usage_00146.pdb 1 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTP---------SGLVAELADLGATATVV 51 G LvTG AR LA GA hl L L AEL lG t usage_00016.pdb 59 ACDVTDRAEMSALLAEF------DVTAVFHAAGVGR-LLPLAETDQNGLAEICAAKVRGA 111 usage_00052.pdb 59 ACDITDRDAVAALLESLK-AEGRTVRTVVHTAATIE-LHTLDATTLDDFDRVLAAKVTGA 116 usage_00101.pdb 59 ACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA 116 usage_00102.pdb 59 ACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA 116 usage_00103.pdb 59 ACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA 116 usage_00132.pdb 59 ACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA 116 usage_00145.pdb 55 TCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAA 111 usage_00146.pdb 52 TCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAA 108 CD D a a LLa aV H p a l AK t A usage_00016.pdb 112 QVLDELCDST-DLDAFVLFSSGAGVWGGGGQGAYGAANAFLDTLAEQR-RARGLPATSIS 169 usage_00052.pdb 117 QILDELLDDE-ELDDFVLYSSTAGMWGSGAHAAYVAGNAYLAALAEHR-RARGLTALSLS 174 usage_00101.pdb 117 RHLHELTADL-DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHR-RSLGLTASSVA 174 usage_00102.pdb 117 RHLHELTADL-DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHR-RSLGLTASSVA 174 usage_00103.pdb 117 RHLHELTADL-DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHR-RSLGLTASSVA 174 usage_00132.pdb 117 RHLHELTADL-DLDAFVLFSSTAAVWGSGGHPGYAAANAYLDALAEHR-RSLGLTASSVA 174 usage_00145.pdb 112 LHLDRLLREAARPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALAGQHR-ADGPTVTSVA 170 usage_00146.pdb 109 LHLDRLLREA--PPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALAGQHR-ADGPTVTSVA 165 L L VLfSS A WG g Y A A LdaLA G t S usage_00016.pdb 170 WGSWAGGGM-ADGAAGEHLRRRGIRPMPAASAILALQEVLDQDETCVSIAD 219 usage_00052.pdb 175 WGIWA-----------QMIRRSGLEFMDPQLALSGLKRALDDDEQVIAVAD 214 usage_00101.pdb 175 WGTWGE------PEVHDRLVRQGVLAMEPEHALGALDQMLENDDTAAAIT- 218 usage_00102.pdb 175 WGTWGE------PEVHDRLVRQGVLAMEPEHALGALDQMLENDDTAAAITL 219 usage_00103.pdb 175 WGTWGEVGM-------DRLVRQGVLAMEPEHALGALDQMLENDDTAAAIT- 217 usage_00132.pdb 175 WGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDDTAAAIT- 224 usage_00145.pdb 171 WSPWEGSRV-TEGATGERLRRLGLRPLAPATALTALDTALGHGDTAVTIAD 220 usage_00146.pdb 166 WSPWEGSRV-TEGATGERLRRLGLRPLAPATALTALDTALGHGDTAVTIAD 215 W W l R G p Al aL L t i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################