################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:32 2021 # Report_file: c_1111_41.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00029.pdb # 3: usage_00090.pdb # 4: usage_00162.pdb # 5: usage_00170.pdb # 6: usage_00171.pdb # 7: usage_00244.pdb # 8: usage_00245.pdb # 9: usage_00246.pdb # 10: usage_00247.pdb # 11: usage_00248.pdb # 12: usage_00249.pdb # 13: usage_00250.pdb # 14: usage_00292.pdb # 15: usage_00380.pdb # 16: usage_00444.pdb # 17: usage_00445.pdb # 18: usage_00446.pdb # 19: usage_00585.pdb # 20: usage_00722.pdb # # Length: 77 # Identity: 65/ 77 ( 84.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 77 ( 84.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 77 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----------LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 50 usage_00029.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00090.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00162.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00170.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00171.pdb 1 ----------LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 50 usage_00244.pdb 1 ----------LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 50 usage_00245.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00246.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00247.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00248.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00249.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00250.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 usage_00292.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00380.pdb 1 ----------LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 50 usage_00444.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00445.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00446.pdb 1 --NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 58 usage_00585.pdb 1 ----------LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 50 usage_00722.pdb 1 YPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI 60 LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI usage_00002.pdb 51 RKEYWRYIGRSLQSKHS 67 usage_00029.pdb 59 RKEYWRYIGRSLQSK-- 73 usage_00090.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00162.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00170.pdb 61 RKEYWRYIGRSLQSK-- 75 usage_00171.pdb 51 RKEYWRYIGRSLQSKHS 67 usage_00244.pdb 51 RKEYWRYIGRSLQSK-- 65 usage_00245.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00246.pdb 61 RKEYWRYIGRSLQSKHS 77 usage_00247.pdb 61 RKEYWRYIGRSLQSKHS 77 usage_00248.pdb 61 RKEYWRYIGRSLQSKHS 77 usage_00249.pdb 61 RKEYWRYIGRSLQSKHS 77 usage_00250.pdb 61 RKEYWRYIGRSLQSKHS 77 usage_00292.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00380.pdb 51 RKEYWRYIGRSLQSKHS 67 usage_00444.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00445.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00446.pdb 59 RKEYWRYIGRSLQSKHS 75 usage_00585.pdb 51 RKEYWRYIGRSLQSKHS 67 usage_00722.pdb 61 RKEYWRYIGRSLQSKHS 77 RKEYWRYIGRSLQSK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################