################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:18 2021 # Report_file: c_1320_45.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00011.pdb # 2: usage_00022.pdb # 3: usage_00024.pdb # 4: usage_00191.pdb # 5: usage_00218.pdb # 6: usage_00250.pdb # 7: usage_00309.pdb # 8: usage_00397.pdb # 9: usage_00419.pdb # 10: usage_00488.pdb # 11: usage_00507.pdb # 12: usage_00508.pdb # 13: usage_00557.pdb # 14: usage_00593.pdb # 15: usage_00611.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 56 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 56 ( 71.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 SAS----------------DTGEYSCEARNG--Y-------GTPMTSNAVRMEAVE 31 usage_00022.pdb 1 LPN----------------DNGSYRCSANF---Q-------SNLIESHSTTLYVTD 30 usage_00024.pdb 1 -LS----------------QTAVYFCASRLG--G-------YEQYFGPGTRLTVLE 30 usage_00191.pdb 1 -TD----------------QTSMYLCASSFL--G-----TGVEQYFGPGTRLTVVE 32 usage_00218.pdb 1 VPS----------------QTSVYFCASSWS--F---G---TEAFFGQGTRLTVVE 32 usage_00250.pdb 1 SPN----------------QTSLYFCASSGA--S-------HEQYFGPGTRLTVT- 30 usage_00309.pdb 1 SLS----------------QTAVYFCASSDW--V---S---YEQYFGPGTRLTVLE 32 usage_00397.pdb 1 APS----------------QTSVYFCASSPP--G---G--TDTQYFGEGSRLTVLE 33 usage_00419.pdb 1 SPN----------------QTSLYFCASSLI--Y---P---GELFFGEGSRLTVLE 32 usage_00488.pdb 1 ---TGKDIRTVFKLNS------ANFDIKFG---EG-------YIDFVVK------- 30 usage_00507.pdb 1 VPS----------------QTSVYFCASSLS--F---G---TEAFFGQGTRLTVVE 32 usage_00508.pdb 1 -PS----------------QTSVYFCASSLS--F---G---TEAFFGQGTRLTVVE 31 usage_00557.pdb 1 -PS----------------QTSVYFCASSPVTGG---I---YGYTFGSGTRLTVVE 33 usage_00593.pdb 1 ----------------IEDIGKVLVCRAKL---H-IDEMDSVPTVRQAVKE----- 31 usage_00611.pdb 1 APS----------------QTSVYFCASTLG--Q---E--GQPQHFGEGSRLTVLE 33 c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################