################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:08 2021 # Report_file: c_0612_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00414.pdb # 2: usage_00458.pdb # 3: usage_00459.pdb # 4: usage_00796.pdb # 5: usage_00797.pdb # 6: usage_00798.pdb # 7: usage_00799.pdb # 8: usage_00841.pdb # 9: usage_00842.pdb # # Length: 103 # Identity: 49/103 ( 47.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/103 ( 48.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/103 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00414.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 usage_00458.pdb 1 NFVSVFWNLLSKRFAENACGMVQVFLNGSISNAFDKTSTFGRVEVHSLQPSKVHTLKAWV 60 usage_00459.pdb 1 NFVSVFWNLLSKRFAENACGMVQVFLNGSISNAFDKTSTFGRVEVHSLQPSKVHTLKAWV 60 usage_00796.pdb 1 NPVSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 60 usage_00797.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 usage_00798.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 usage_00799.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 usage_00841.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVQVHNLQPEKVQTLEAWV 58 usage_00842.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 VSVFW S RFAE AC V V L GS S FDK STFG VeVH LQP KV TL AWV usage_00414.pdb 59 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 93 usage_00458.pdb 61 IHDSG----KT-PRDTCSGSSINELQLILRGKNIKFTCQENYR 98 usage_00459.pdb 61 IHDSG----KT-PRDTCSGSSINELQLILRGKNIKFTCQENYR 98 usage_00796.pdb 61 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 95 usage_00797.pdb 59 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 93 usage_00798.pdb 59 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 93 usage_00799.pdb 59 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 93 usage_00841.pdb 59 IHG-G--RD------LCQDPTIKELESIISKRNIQFSCKN--- 89 usage_00842.pdb 59 IHGGRED--SRD---LCQDPTIKELESIISKRNIQFSCKN--- 93 IH C I EL I NI F C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################