################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:18:55 2021 # Report_file: c_0086_3.html ################################################################################################ #==================================== # Aligned_structures: 39 # 1: usage_00026.pdb # 2: usage_00029.pdb # 3: usage_00033.pdb # 4: usage_00034.pdb # 5: usage_00035.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00050.pdb # 9: usage_00061.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # 12: usage_00065.pdb # 13: usage_00074.pdb # 14: usage_00075.pdb # 15: usage_00082.pdb # 16: usage_00095.pdb # 17: usage_00096.pdb # 18: usage_00097.pdb # 19: usage_00098.pdb # 20: usage_00115.pdb # 21: usage_00122.pdb # 22: usage_00128.pdb # 23: usage_00142.pdb # 24: usage_00145.pdb # 25: usage_00146.pdb # 26: usage_00148.pdb # 27: usage_00149.pdb # 28: usage_00150.pdb # 29: usage_00151.pdb # 30: usage_00153.pdb # 31: usage_00155.pdb # 32: usage_00156.pdb # 33: usage_00158.pdb # 34: usage_00162.pdb # 35: usage_00164.pdb # 36: usage_00168.pdb # 37: usage_00169.pdb # 38: usage_00173.pdb # 39: usage_00174.pdb # # Length: 143 # Identity: 26/143 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/143 ( 24.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/143 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFTFS-RY-TMSWVRQAPGKGLEWVAVISGG-G--H 54 usage_00029.pdb 1 -QLVQSGAEVKEPGESLRISCKGSGYSFT-NF-WISWVRQMPGKGLEWMGRVDPG-Y-SY 55 usage_00033.pdb 1 -QLVQSGGGLVKPGGSLRLSCAASGFTFS-SY-SMNWVRQAPGKGLEWVSSISSS-S-SY 55 usage_00034.pdb 1 VQLVQSGGGLVKPGGSLRLSCAASGFTFS-SY-SMNWVRQAPGKGLEWVSSISSS-S-SY 56 usage_00035.pdb 1 -QLVESGGGLVQPGGSLRLSCAVSGYSIT-SGYSWNWIRQAPGKGLEWVASITYD-G--S 55 usage_00048.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFN-SY-WINWVRQAPGKGLEWVSGIAYD-S-SN 56 usage_00049.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFN-SY-WINWVRQAPGKGLEWVSGIAYD-S-SN 56 usage_00050.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSQISPA-G-GY 55 usage_00061.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFS-RY-VMWWVRQAPGKGLEWVSYIWPS-G-GN 56 usage_00063.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFTFR-NS-AMHWVRQAPGKGLEWVSSIWYS-G-SN 55 usage_00064.pdb 1 -LLEQSGAEVKKPGSSVQVSCKASGGTFS-MY-GFNWVRQAPGHGLEWMGGIIPI-F-GT 55 usage_00065.pdb 1 -LLEQSGAEVKKPGSSVQVSCKASGGTFS-MY-GFNWVRQAPGHGLEWMGGIIPI-F-GT 55 usage_00074.pdb 1 VQLVESGGGLVQPKGSLKLSCAASGFTFN-TY-AMNWVRQAPGKGLEWVARIRSKSNNYA 58 usage_00075.pdb 1 VQLVESGGGLVQPKGSLKLSCAASGFTFN-TY-AMNWVRQAPGKGLEWVARIRSKSNNYA 58 usage_00082.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFT-DY-TMDWVRYAPGKGLEWVADVNPN-S-GG 56 usage_00095.pdb 1 VQLVESGGGLVQPGGSLRLSCTGSGFTFD-NY-AMHWLRQVPGEGLEWVSGISRS-S-GD 56 usage_00096.pdb 1 -QLVESGGGLVQPGGSLRLSCTGSGFTFD-NY-AMHWLRQVPGEGLEWVSGISRS-S-GD 55 usage_00097.pdb 1 VQLVESGGGLVQPGGSLRLSCTGSGFTFD-NY-AMHWLRQVPGEGLEWVSGISRS-S-GD 56 usage_00098.pdb 1 VQLVESGGGLVQPGGSLRLSCTGSGFTFD-NY-AMHWLRQVPGEGLEWVSGISRS-S-GD 56 usage_00115.pdb 1 VQLVESGGGSVQAGGSLRLSCAVSGST-YSPC-TTGWVRQAPGKGLEWVSSISSP-G--T 55 usage_00122.pdb 1 -QLIQSGSAVKKPGASVRVSCKVSGYTLT-EA-AIHWVRQAPGKGLEWMGGLDPQ-D-GE 55 usage_00128.pdb 1 -QLVQSGGGLVKPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAISGS-G-GS 55 usage_00142.pdb 1 VQLLESGGGVVQPGRSLRLSCTASGFTFN-NY-GMHWVRQTPGKGLEWLAVIWFD-E-NN 56 usage_00145.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFNIK-DT-YIGWVRRAPGKGEELVARIYPT-N-GY 55 usage_00146.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAISGS-G-GS 56 usage_00148.pdb 1 VQLVESGGGLVQPGGSLRLSCTGSGFTFD-NY-AMHWLRQVPGEGLEWVSGISRS-S-GD 56 usage_00149.pdb 1 -NLRESGGGLVQPGGSLRLSCAASGFSFG-SY-GMHWVRQAPGKGLEWVAVISYG-G-GN 55 usage_00150.pdb 1 VQLVESGGGLVQPGRSLRLSCAASGFSFD-EY-TMHWVRQAPGKGLEWVAGINWK-G-NF 56 usage_00151.pdb 1 VQLVESGGGVVQPGRSLRLSCAASGFTFS-VY-GMNWVRQAPAKGLEWVAIIWYD-G-DN 56 usage_00153.pdb 1 VQLVESGAEVKKPGSSVKVSCKASGGTFI-TH-VFTWVRQAPGQGLEWVGGFIAI-F-GT 56 usage_00155.pdb 1 -QLVESGGGVVQPGRSLRLSCAASGFTFS-SY-GMHWVRQAPGKGLEWVAVIWYD-G-SN 55 usage_00156.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFS-SY-AMHWVRQAPGKGLEWVAVISSD-G-GN 56 usage_00158.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAISGS-G-GS 56 usage_00162.pdb 1 -QLVESGGGLVQPGGSLRLSCAVSGYSIT-SGYSWNWIRQAPGKGLEWVASITYD-G--S 55 usage_00164.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFS-SY-WMNWVRQAPGKGLEWVSGIENKYAGGA 58 usage_00168.pdb 1 -QLVESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAINSQ-G-KS 55 usage_00169.pdb 1 VQLVESGGGLVQPGGSLRLSCAASGFTFS-SY-WMNWVRQAPGKGLEWVSGISYS-G-SE 56 usage_00173.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAISGS-G-GS 56 usage_00174.pdb 1 VQLLESGGGLVQPGGSLRLSCAASGFTFS-SY-AMSWVRQAPGKGLEWVSAISGS-G-GS 56 L SG p S SC SG W R Pg GlEw usage_00026.pdb 55 TYYLDSVEGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGFG--D------------- 99 usage_00029.pdb 56 STYSPSFQGHVTISADKSTSTAYLQWNSLKASDTAMYYCARVQY--S-----------G- 101 usage_00033.pdb 56 IYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVT----------------- 98 usage_00034.pdb 57 IYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVT----------------- 99 usage_00035.pdb 56 TNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH--Y-----------F- 101 usage_00048.pdb 57 TLYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGLG--A-F---------H- 103 usage_00049.pdb 57 TLYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGLG--A-F---------H- 103 usage_00050.pdb 56 TNYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGEL--P-Y---------Y- 102 usage_00061.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSYD--F-W----------- 102 usage_00063.pdb 56 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARFAG--G------------- 100 usage_00064.pdb 56 SNYAQKFRGRVTFTADQATSTAYMELTNLRSDDTAVYYCARDFG--P--DWE-DG-DSY- 108 usage_00065.pdb 56 SNYAQKFRGRVTFTADQATSTAYMELTNLRSDDTAVYYCARDFG--P--DWE-DG-DSY- 108 usage_00074.pdb 59 TYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRHRG--A-PL----Y--YG- 108 usage_00075.pdb 59 TYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRHRG--A-PL----Y--YG- 108 usage_00082.pdb 57 SIYNQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLG--P------------- 101 usage_00095.pdb 57 IDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV---------------- 100 usage_00096.pdb 56 IDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV---------------- 99 usage_00097.pdb 57 IDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV---------------- 100 usage_00098.pdb 57 IDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV---------------- 100 usage_00115.pdb 56 IYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCG--V------------- 100 usage_00122.pdb 56 TVYAQQFKGRVTMTEDRSTDTAYMEVNNLRSEDTATYYCTTGDF-----SEF--E---P- 104 usage_00128.pdb 56 TYYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTY----PQ-RRGP-Q- 108 usage_00142.pdb 57 KYYADSVRGRFTISRDNSKNTLFLQMNSLKTEDTAMYYCARDIS--L-V---------R- 103 usage_00145.pdb 56 TRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCYYHYY--GWH-----P----- 103 usage_00146.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYD----------------- 99 usage_00148.pdb 57 IDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGF---------------- 100 usage_00149.pdb 56 KYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDAR--D-C-----L---L- 103 usage_00150.pdb 57 MGYADSVQGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAKDRL--E-S-SAMD-I--L- 108 usage_00151.pdb 57 QYYADSVKGRFTISRDNSKNTLYLQMNGLRAEDTAVYYCARDLR--T------------- 101 usage_00153.pdb 57 SNYAQKFQGRVTITADESTSTAYMELTSLTSEDTAVYYCARGIS--G------------- 101 usage_00155.pdb 56 KFYEDSVKGRFTISRDNSKNTLYLQMDSLRAEDTAVYYCAREGA--A-VR--------SF 104 usage_00156.pdb 57 KYYTDSVKGRFTISRNDSKNTLYLQMNSLRTEDTAVFYCARGNP--P-Y---------S- 103 usage_00158.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCVKDRV--A-V-----A---G- 104 usage_00162.pdb 56 TNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH--Y-----------F- 101 usage_00164.pdb 59 TYYAASVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARG------------------ 100 usage_00168.pdb 56 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARWGD---------------- 99 usage_00169.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARG------------------ 98 usage_00173.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYDG--I------------- 101 usage_00174.pdb 57 TYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYDG--I------------- 101 Y r T d L DTa yYC usage_00026.pdb 100 ------GGYF-DVWGQGTLVTVS 115 usage_00029.pdb 102 ----Y-YDWF-DPWGQGTLVTVS 118 usage_00033.pdb 99 -------DAF-DIWGQGTMVTVS 113 usage_00034.pdb 100 -------DAF-DIWGQGTMVTVS 114 usage_00035.pdb 102 ----G-HWHF-AVWGQGTLVTV- 117 usage_00048.pdb 104 ----W-DMQP-DYWGQGTLVTVS 120 usage_00049.pdb 104 ----W-DMQP-DYWGQGTLVTVS 120 usage_00050.pdb 103 ----RMSKVM-DVWGQGTLVTVS 120 usage_00061.pdb 103 ------SNAF-DIWGQGTMVTVS 118 usage_00063.pdb 101 ------WGAY-DVWGQGTLVTVS 116 usage_00064.pdb 109 -DGSG-RGFF-DFWGQGTLVTVS 128 usage_00065.pdb 109 -DGSG-RGFF-DFWGQGTLVTVS 128 usage_00074.pdb 109 ----N-GAWF-AYWGQGTLVTVS 125 usage_00075.pdb 109 ----N-GAWF-AYWGQGTLVTVS 125 usage_00082.pdb 102 ------SFYF-DYWGQGTLVTVS 117 usage_00095.pdb 101 -------GSF-DTWGQGTMVTVS 115 usage_00096.pdb 100 -------GSF-DTWGQGTMVTV- 113 usage_00097.pdb 101 -------GSF-DTWGQGTMVTVS 115 usage_00098.pdb 101 -------GSF-DTWGQGTMVTVS 115 usage_00115.pdb 101 -------SIR-EYWGQGTQVTVS 115 usage_00122.pdb 105 -F--S-MDYF-HFWGQGTVVTVA 122 usage_00128.pdb 109 ----N-VSPF-DNWGQGTMVTVS 125 usage_00142.pdb 104 -D--A-FIYF-DFWGLGTLVTVS 121 usage_00145.pdb 104 ----G--YGLSYSSGQGTLVTVS 120 usage_00146.pdb 100 -------GEL-DFWGQGTLVTV- 113 usage_00148.pdb 101 -------GSF-DTWGQGTMVTV- 114 usage_00149.pdb 104 -C--A-DWHF-DLWGRGTLVTVS 121 usage_00150.pdb 109 ----E-GGTF-DIWGQGTMVTVS 125 usage_00151.pdb 102 -------GPF-DYWGQGTLVTVS 116 usage_00153.pdb 102 ----S-YGWF-DPWGQGTLVTVS 118 usage_00155.pdb 105 YY--S-YYGM-DVWGQGTTVTVS 123 usage_00156.pdb 104 -S--G-WGGG-DYWGQGTMVTV- 120 usage_00158.pdb 105 -K--G-SYYF-DSWGRGTTVTVS 122 usage_00162.pdb 102 ----G-HWHF-AVWGQGTLVTV- 117 usage_00164.pdb 101 -------FGT-DFWGQGTLVTVS 115 usage_00168.pdb 100 -------EGF-DIWGQGTLVTV- 113 usage_00169.pdb 99 -------FGT-DFWGQGTLVTVS 113 usage_00173.pdb 102 ------YGEL-DFWGQGTLVTV- 116 usage_00174.pdb 102 ------YGEL-DFWGQGTLVTVS 117 wG GT VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################