################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:53:25 2021 # Report_file: c_1109_32.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00055.pdb # 6: usage_00056.pdb # 7: usage_00057.pdb # 8: usage_00097.pdb # 9: usage_00098.pdb # 10: usage_00318.pdb # 11: usage_00323.pdb # 12: usage_00324.pdb # 13: usage_00330.pdb # 14: usage_00331.pdb # 15: usage_00333.pdb # 16: usage_00334.pdb # 17: usage_00344.pdb # # Length: 71 # Identity: 15/ 71 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 71 ( 21.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 71 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -VS--VRYLEVFMKDDAELEKLKAD---YKTGKLLTGEVKATLIGILQGLIKEHAERRDK 54 usage_00034.pdb 1 -VS--VRYLEVFMKDDAELEKLKAD---YKTGKLLTGEVKATLIGILQGLIKEHAERRDK 54 usage_00053.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00054.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00055.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00056.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00057.pdb 1 DVS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 55 usage_00097.pdb 1 ----VSFYLTFFLEDDDKLEQIRKD---YTSGA-LTGELKKALIEVLQPLIAEHQARRKE 52 usage_00098.pdb 1 ---DVSFYLTFFLEDDDKLEQIRKD---YTSGA-LTGELKKALIEVLQPLIAEHQARRKE 53 usage_00318.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00323.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00324.pdb 1 -VS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 54 usage_00330.pdb 1 ----VSFYLTFFLEDDDKLEQIRKD---YTSGA-LTGELKKALIEVLQPLIAEHQARRKE 52 usage_00331.pdb 1 ---DVSFYLTFFLEDDDKLEQIRKD---YTSGA-LTGELKKALIEVLQPLIAEHQARRKE 53 usage_00333.pdb 1 DVP--IQWLSFFLEDDEELARVKK----------MTGEVKKLLINTITAITKTHQEKRKL 48 usage_00334.pdb 1 --P--IQWLSFFLEDDEELARVKKEGRI------MTGEVKKLLINTITAITKTHQEKRKL 50 usage_00344.pdb 1 DVS--FMYLTFFLEDDDKLEQIRKD---YTSGAMLTGELKKALIEVLQPLIAEHQARRKE 55 L F DD L TGE K LI H R usage_00033.pdb 55 VDTTMIESFTV 65 usage_00034.pdb 55 VDTTMIESFTV 65 usage_00053.pdb 55 VTDEIVKEFM- 64 usage_00054.pdb 55 VTDEIVKEFM- 64 usage_00055.pdb 55 VTDEIVKEFM- 64 usage_00056.pdb 55 VTDEIVKEFMT 65 usage_00057.pdb 56 VTDEIVKEFM- 65 usage_00097.pdb 53 VTDEIVKEF-- 61 usage_00098.pdb 54 VTDEIVKEF-- 62 usage_00318.pdb 55 VTDEIVKEFMT 65 usage_00323.pdb 55 VTDEIVKEFMT 65 usage_00324.pdb 55 VTDEIVKEFM- 64 usage_00330.pdb 53 VTDEIVKEF-- 61 usage_00331.pdb 54 VTDEIVKEF-- 62 usage_00333.pdb 49 VTDEDVQLFT- 58 usage_00334.pdb 51 VTDEDVQLFT- 60 usage_00344.pdb 56 VTDEIVKEFM- 65 V F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################