################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:21 2021 # Report_file: c_0665_4.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00317.pdb # 2: usage_00500.pdb # 3: usage_00501.pdb # # Length: 103 # Identity: 87/103 ( 84.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/103 ( 86.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/103 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00317.pdb 1 SRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYE 60 usage_00500.pdb 1 SRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYE 60 usage_00501.pdb 1 SRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYE 60 SRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYE usage_00317.pdb 61 NFYAGGSSTVRGFQSNTIGPKAVYFPHQD----G-AKDLCKSD 98 usage_00500.pdb 61 NFYAGGSSTVRGFQSNTIGPKAIYFPHQA-----SAKDLCKS- 97 usage_00501.pdb 61 NFYAGGSSTVRGFQSNTIGPKAIYFPHQDLCKS---------D 94 NFYAGGSSTVRGFQSNTIGPKAiYFPHQd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################