################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:55 2021 # Report_file: c_0466_17.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00010.pdb # 5: usage_00054.pdb # 6: usage_00057.pdb # 7: usage_00061.pdb # 8: usage_00062.pdb # 9: usage_00069.pdb # 10: usage_00095.pdb # 11: usage_00096.pdb # 12: usage_00097.pdb # # Length: 110 # Identity: 4/110 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/110 ( 9.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/110 ( 41.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 TGLTLFNNQI--T---D-IDPLKNL------TNLNRLELSSN-T---------------- 31 usage_00006.pdb 1 NRLELSSNTI--S---D-ISALSGL------TSLQQLNFGN--Q---------------- 30 usage_00007.pdb 1 NRLELSSNTI--S---D-ISALSGL------TSLQQLSFGN--Q---------------- 30 usage_00010.pdb 1 TGLTLFNNQI--T---D-IDPLKNL------TNLNRLELSSN-T---------------- 31 usage_00054.pdb 1 TTLDLSGNGF--K---E--SMAKRFFDAIAGTKIQSLILSNS-YNMGSSFGHTNFKDPDN 52 usage_00057.pdb 1 TLLDLSHSAH--DD--SILTKINTL------PKVTSIDLSYNGA---------------- 34 usage_00061.pdb 1 TKLFLNGNKL--T---D-IKPLANL------KNLGWLFLDEN-K---------------- 31 usage_00062.pdb 1 TKLFLNGNKL--T---D-IKPLANL------KNLGWLFLDEN-K---------------- 31 usage_00069.pdb 1 SVLDLSENFLYES-ITH-TNAFQNL------TRLRKLNLSFNYR---------RL----- 38 usage_00095.pdb 1 HTLDLSNNGI--T---D-ISALKNL------DNLHTLDLSNN-G---------------- 31 usage_00096.pdb 1 HTLDLSNNGI--T---D-ISALKNL------DNLHTLDLSNN-G---------------- 31 usage_00097.pdb 1 HTLDLSNNGI--T---D-ISALKNL------DNLHTLDLSNN-G---------------- 31 L L n l l usage_00005.pdb 32 -ISDISALSGLTSLQQLNFGN-QV-T-----D-LKPLANLTTLERLDI-- 70 usage_00006.pdb 31 -VTDLKPLANLTTLERLDISSNKV-S-----D-ISVLAKLTNLESLIA-- 70 usage_00007.pdb 31 -VTDLKPLANLTTLERLDISSNKV-S-----D-ISVLAKLTNLESLIA-- 70 usage_00010.pdb 32 -ISDISALSGLTSLQQLSFGN-QV-T-----D-LKPLANLTTLERLDIS- 71 usage_00054.pdb 53 F--TFKGLEASG-VKTCDLSKSKIFA-----LLKSVFSHFTDLEQLTL-- 92 usage_00057.pdb 35 -ITDIMPLKTMPELKSLNIQFDGV-H-----D-YRGIEDFPKLNTLLA-- 74 usage_00061.pdb 32 -VKDLSSLKDLKKLKSLSLEHNGI-S-----D-INGLVHLPQLESLYL-- 71 usage_00062.pdb 32 -VKDLSSLKDLKKLKSLSLEHNGI-S-----D-INGLVHLPQLESLYL-- 71 usage_00069.pdb 39 -HL-ASSFKNLVSLQELNMNGIFF-RLLNKYT-LRWLADLPKLHTLHL-- 82 usage_00095.pdb 32 -ITDISALKNLDNLHTLDLSNNGI-T-----D-ISALKNLTSLHTLDLSN 73 usage_00096.pdb 32 -ITDISALKNLDNLHTLDLSNNGI-T-----D-ISALKNLTSLHTLDLSN 73 usage_00097.pdb 32 -ITDISALKNLDNLHTLDLSNNGI-T-----D-ISALKNLTSLHTLDL-- 71 l l l L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################