################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:47 2021 # Report_file: c_0389_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00004.pdb # 2: usage_00058.pdb # 3: usage_00059.pdb # 4: usage_00103.pdb # 5: usage_00205.pdb # # Length: 71 # Identity: 4/ 71 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 71 ( 32.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 71 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -QVAWSSDCRLLVSCSKDTTLKVWDVRT-R-KLSVDLPGHKDEVYTVDWSVDGKRVCSGG 57 usage_00058.pdb 1 NALEVTPDRSMIAAAGY-QHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG 59 usage_00059.pdb 1 NALEVTPDRSMIAAAGY-QHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG 59 usage_00103.pdb 1 QTASFHPLRPLFFVATQ-RSIRCYDLQKLEL--VKIVQPGAKWISSFDVHPGGDNLVVGS 57 usage_00205.pdb 1 NALEVTPDRSMIAAAGY-QHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGG 59 pdr a ir yDl g k i sv h dG Gg usage_00004.pdb 58 KDKMVRLWT-- 66 usage_00058.pdb 60 EDCTARIWDLR 70 usage_00059.pdb 60 EDCTARIWDLR 70 usage_00103.pdb 58 YDKRLLWHD-- 66 usage_00205.pdb 60 EDCTARIWDLR 70 D r wd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################