################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:04 2021 # Report_file: c_0737_20.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00072.pdb # 2: usage_00179.pdb # 3: usage_00308.pdb # 4: usage_00309.pdb # 5: usage_00340.pdb # 6: usage_00350.pdb # 7: usage_00514.pdb # # Length: 86 # Identity: 20/ 86 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 86 ( 64.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 86 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 VYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEP 60 usage_00179.pdb 1 -----LLLVQHSDMETALTIQFSYSDSVDLVLQTAREQFLVEPQEDTRLWTKNSEGSLDR 55 usage_00308.pdb 1 VYLLELKLCENSDPTNVLSCHFSKADTIATIEKE-RKLFNIPAERETRLWNKYS-NTYEQ 58 usage_00309.pdb 1 -----LKLCENSDPTNVLSCHFSKADTIATIEKE-RKLFNIPAERETRLWNKYS-NTYEQ 53 usage_00340.pdb 1 -----LKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEP 55 usage_00350.pdb 1 --LLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQ 58 usage_00514.pdb 1 ----ELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEP 56 LkLcen nv FSkaDti tieke Rk F ip e eTRLWnKy nt e usage_00072.pdb 61 LNKPDSTIQDAGLYQGQVLVIEQ--- 83 usage_00179.pdb 56 LCNTQITLLDACLETGQLVIME---- 77 usage_00308.pdb 59 LSKLDNTIQDAGLYQGQVLVIEP--- 81 usage_00309.pdb 54 LSKLDNTIQDAGLYQGQVLVIEP--- 76 usage_00340.pdb 56 LNKPDSTIQDAGLYQGQVLVIEQK-- 79 usage_00350.pdb 59 LSKLDNTVQDAGLYQGQVLVIE---- 80 usage_00514.pdb 57 LNKPDSTIQDAGLYQGQVLVIEQKNE 82 L k d T qDAgLyqGQvlviE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################