################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:59:03 2021 # Report_file: c_0304_2.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00021.pdb # 8: usage_00022.pdb # 9: usage_00023.pdb # 10: usage_00024.pdb # 11: usage_00025.pdb # 12: usage_00026.pdb # 13: usage_00031.pdb # 14: usage_00056.pdb # 15: usage_00057.pdb # 16: usage_00058.pdb # 17: usage_00059.pdb # 18: usage_00065.pdb # # Length: 138 # Identity: 27/138 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/138 ( 68.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/138 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00016.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00017.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00018.pdb 1 --CYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 50 usage_00019.pdb 1 --CYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 50 usage_00020.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00021.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00022.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00023.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00024.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00025.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00026.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00031.pdb 1 RKCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 52 usage_00056.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00057.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00058.pdb 1 -KCYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 51 usage_00059.pdb 1 --CYYFGKGTKQWVHARYACDDM--EGQLVSIHSPEEQDFLTKHAS------HTGSWIGL 50 usage_00065.pdb 1 --CYRPFKEKKTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGL 58 CYyfgKgtKqWvhAryaCddm EgqLVSihspeEqdFltkhas htgSWIGL usage_00015.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00016.pdb 52 RNLDE------FIWVDGSHVDYSNWAP--GEPTS--QGEDCVMMRG----SGRWNDAFCD 97 usage_00017.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00018.pdb 51 RNLD----GE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 99 usage_00019.pdb 51 RNL-----GE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 98 usage_00020.pdb 52 RNL------E-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 98 usage_00021.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00022.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00023.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEP-----GEDCVMMRG----SGRWNDAFCD 97 usage_00024.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPT---QGEDCVMMRG----SGRWNDAFCD 99 usage_00025.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00026.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00031.pdb 53 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 103 usage_00056.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNDAFCD 102 usage_00057.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNAAFCD 102 usage_00058.pdb 52 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNAAFCD 102 usage_00059.pdb 51 RNLD--LKGE-FIWVDGSHVDYSNWAP--GEPTSRSQGEDCVMMRG----SGRWNAAFCD 101 usage_00065.pdb 59 KIEN-KGQRSNLEWSDG---SSISYENLYEPYM----E-KCFLMDHQSGLP-KWHTADCE 108 rnl fiWvDG dysnwap gep g dCvmMrg s rWn AfCd usage_00015.pdb 103 RKLGAWVCDRL------- 113 usage_00016.pdb 98 RKLGAWVCDRL------- 108 usage_00017.pdb 103 RKLGAWVCDRL------- 113 usage_00018.pdb 100 RKLGAWVCDRL------- 110 usage_00019.pdb 99 RKLGAWVCDRL------- 109 usage_00020.pdb 99 RKLGAWVCDRL------- 109 usage_00021.pdb 103 RKLGAWVCDRL------- 113 usage_00022.pdb 103 RKLGAWVCDRLATCTP-- 118 usage_00023.pdb 98 RKLGAWVCDRL------- 108 usage_00024.pdb 100 RKLGAWVCDRLATCTP-- 115 usage_00025.pdb 103 RKLGAWVCDRLATCTPPA 120 usage_00026.pdb 103 RKLGAWVCDRL------- 113 usage_00031.pdb 104 RKLGAWVCD--------- 112 usage_00056.pdb 103 RKLGAWVCDRL------- 113 usage_00057.pdb 103 RKLGAWVCDRL------- 113 usage_00058.pdb 103 RKLGAWVCDRL------- 113 usage_00059.pdb 102 RKLGAWVCDRL------- 112 usage_00065.pdb 109 EKNVFMCKFQ-------- 118 rKlgawvcd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################