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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:59:34 2021
# Report_file: c_1479_36.html
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#====================================
# Aligned_structures: 8
#   1: usage_00100.pdb
#   2: usage_00638.pdb
#   3: usage_00639.pdb
#   4: usage_00640.pdb
#   5: usage_00641.pdb
#   6: usage_01438.pdb
#   7: usage_01439.pdb
#   8: usage_01806.pdb
#
# Length:         68
# Identity:       39/ 68 ( 57.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     39/ 68 ( 57.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/ 68 ( 42.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00100.pdb         1  LLDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNFWKWGYPVVLAVMGVIAVIM   60
usage_00638.pdb         1  -----------------------ATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   34
usage_00639.pdb         1  -----------------------ATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   34
usage_00640.pdb         1  -----------------------ATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   34
usage_00641.pdb         1  -----------------------ATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   34
usage_01438.pdb         1  -LDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   56
usage_01439.pdb         1  -LDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   56
usage_01806.pdb         1  -LDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNF---GYPVVLAVMGVIAVIM   56
                                                  ATIFMPLTFIAGIYGMNF   GYPVVLAVMGVIAVIM

usage_00100.pdb        61  VVYFKKKK   68
usage_00638.pdb        35  VVYFKKKK   42
usage_00639.pdb        35  VVYFKKKK   42
usage_00640.pdb        35  VVYFKKKK   42
usage_00641.pdb        35  VVYFKKKK   42
usage_01438.pdb        57  VVYFKKKK   64
usage_01439.pdb        57  VVYFKKKK   64
usage_01806.pdb        57  VVYFK---   61
                           VVYFK   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################