################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:42 2021 # Report_file: c_0514_71.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00149.pdb # 2: usage_00301.pdb # 3: usage_00383.pdb # 4: usage_00496.pdb # # Length: 136 # Identity: 22/136 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/136 ( 37.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/136 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00149.pdb 1 GHADYVKNMITGAAQMDGAILVVAATD---GPMPQTREHILLGRQVGVPYIIVFLNKCDM 57 usage_00301.pdb 1 --DF-VKNMITGASQADAAVLVVAATD---GVMPQTKEHAFLARTLGIKHIIVTINKMDM 54 usage_00383.pdb 1 -HADYVKNMITGAAQMDGAILVVAATD---GPMPQTREHILLGRQVGVPYIIVFLNKCDM 56 usage_00496.pdb 1 -VPNAIMGIS----QADMAILCVDCS-TGFDLDGQTKEHMLLASSLGIHNLIIAMNKMDN 54 vknmi Q D AiLvVaat g mpQT EH lL r G iIv NK Dm usage_00149.pdb 58 VD-DEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKA--LEGD---AEWEAKIL--EL 109 usage_00301.pdb 55 VNYDQKVFEKVKAQVEKLLKTLGYK-D-FPVIPTSAWNGDNVVK-KSD-K-MPWYNGPTL 109 usage_00383.pdb 57 VD-DEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKA--LEGD---AEWEAKIL--EL 108 usage_00496.pdb 55 VDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKIEYTDEVRQWYNGPNL 114 Vd d E v v lL f D p v Sa e L usage_00149.pdb 110 AGFLDS---------- 115 usage_00301.pdb 110 IEALDQI--------- 116 usage_00383.pdb 109 AGFLDS---------- 114 usage_00496.pdb 115 MSTLENAAFKISKENE 130 Ld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################