################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:14:03 2021 # Report_file: c_0351_10.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00005.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00020.pdb # 5: usage_00026.pdb # 6: usage_00028.pdb # 7: usage_00029.pdb # 8: usage_00064.pdb # 9: usage_00069.pdb # 10: usage_00077.pdb # 11: usage_00078.pdb # 12: usage_00090.pdb # 13: usage_00093.pdb # 14: usage_00094.pdb # 15: usage_00095.pdb # 16: usage_00097.pdb # 17: usage_00118.pdb # 18: usage_00119.pdb # 19: usage_00120.pdb # # Length: 108 # Identity: 13/108 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/108 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/108 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTSNDG-------------- 46 usage_00008.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT------------------ 42 usage_00009.pdb 1 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLS---D----------QPK- 46 usage_00020.pdb 1 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLY---H-------------- 43 usage_00026.pdb 1 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLS---D----------QPKA 47 usage_00028.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GD-----ND-G---- 47 usage_00029.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GD-----ND-G---- 47 usage_00064.pdb 1 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLS---D----------QPKA 47 usage_00069.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GDD----NDG----- 48 usage_00077.pdb 1 WFHGHLSG-EAEKLLTEKGKHGSFLVRESS-HPGDFVLSVRT---G-------------- 41 usage_00078.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRES-----DFVLSVRT------------------ 37 usage_00090.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GD------------- 44 usage_00093.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRES--HPGDFVLSVRT---G-------------- 41 usage_00094.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESS-HPGDFVLSVRT---G-------------- 42 usage_00095.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GD------------- 44 usage_00097.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVR----HPGDFVLSVRT---G-------------- 39 usage_00118.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRES----GDFVLSVRT---G-------------- 39 usage_00119.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESS-HPGDFVLSVRT------------------ 41 usage_00120.pdb 1 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT---GDDKGESNDG----- 52 w HGh Sg aE LL kG fLvR dfvLsV usage_00005.pdb 47 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 83 usage_00008.pdb 43 -----SKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 78 usage_00009.pdb 47 ---SPLRVTHIKVMCEGGR-YTVGG-----LETFDSLTDLVEHFKKT- 84 usage_00020.pdb 44 -----GYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAF---- 82 usage_00026.pdb 48 GPGSPLRVTHIKVMCEGGR-YTVGG-----LETFDSLTDLVEHFKKT- 88 usage_00028.pdb 48 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 84 usage_00029.pdb 48 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 84 usage_00064.pdb 48 GPGSPLRVTHIKVMCEGGR-YTVGG-----LETFDSLTDLVEHFKKT- 88 usage_00069.pdb 49 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 85 usage_00077.pdb 42 -----SKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKNP 78 usage_00078.pdb 38 -----SKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKNP 74 usage_00090.pdb 45 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 81 usage_00093.pdb 42 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKNP 79 usage_00094.pdb 43 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 79 usage_00095.pdb 45 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 81 usage_00097.pdb 40 ------KVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 74 usage_00118.pdb 40 ----DSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKN- 76 usage_00119.pdb 42 -----SKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKKNP 78 usage_00120.pdb 53 ----KSKVTHVMIRCQELK-YDVGG-----GERFDSLTDLVEHYKK-- 88 vth c y vgg e FdsltdLveh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################