################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:03 2021 # Report_file: c_1442_1043.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01361.pdb # 2: usage_01362.pdb # 3: usage_08121.pdb # 4: usage_11721.pdb # 5: usage_11722.pdb # 6: usage_15978.pdb # 7: usage_16756.pdb # 8: usage_19065.pdb # # Length: 27 # Identity: 8/ 27 ( 29.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 27 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 27 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01361.pdb 1 -----KVTVYPS-------NLLVCSVS 15 usage_01362.pdb 1 -----KVTVYPS-------NLLVCSVS 15 usage_08121.pdb 1 -----KVTVYPS-------NLLVCSVS 15 usage_11721.pdb 1 -----RVNVSPSKH-----NLLVCHVT 17 usage_11722.pdb 1 -----RVNVSPSKH-----NLLVCHVT 17 usage_15978.pdb 1 RRVEPKVTVYPS-------NLLVCSVS 20 usage_16756.pdb 1 -----TVTVYPT--------LLVCSVS 14 usage_19065.pdb 1 -----KVTVYPSK-TQPHHNLLVCSVS 21 V V Ps LLVC V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################