################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:04 2021 # Report_file: c_1429_61.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00178.pdb # 2: usage_00359.pdb # 3: usage_00644.pdb # 4: usage_00734.pdb # 5: usage_00735.pdb # 6: usage_00937.pdb # 7: usage_00938.pdb # 8: usage_00939.pdb # 9: usage_00944.pdb # 10: usage_01007.pdb # 11: usage_01008.pdb # 12: usage_01045.pdb # # Length: 82 # Identity: 13/ 82 ( 15.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 82 ( 70.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 82 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 G--TSAAPQVSGICALLFEWGIIRNNDPFLYG---------ERIKYYLIKGAKRTIFGEA 49 usage_00359.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_00644.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_00734.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKIAPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_00735.pdb 1 -GTAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDAISKNTVRGILHITADDLGP--T 55 usage_00937.pdb 1 -------PHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 49 usage_00938.pdb 1 -GTCMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 55 usage_00939.pdb 1 --TCMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_00944.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_01007.pdb 1 -------PHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 49 usage_01008.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 usage_01045.pdb 1 --TAMATPHVSGVVALIQAAYYQKY--GKILPVGTFDDISKNTVRGILHITADDLGP--T 54 PhVSGvvALiqaayyqky gki p ntvrgiLhitAddlgp t usage_00178.pdb 50 YPNPDLGYGFVCLDRTELL--- 68 usage_00359.pdb 55 GWDADYGYGVVRAALAVQAA-- 74 usage_00644.pdb 55 GWDADYGYGVVRAALAVQAALG 76 usage_00734.pdb 55 GWDADYGYGVVRAALAVQAALG 76 usage_00735.pdb 56 GWDADYGYGVVRAALAVQAAL- 76 usage_00937.pdb 50 GWDADYGYGVVRAALAVQAAL- 70 usage_00938.pdb 56 GWDADYGYGVVRAALAVQAAL- 76 usage_00939.pdb 55 GWDADYGYGVVRAALAVQAA-- 74 usage_00944.pdb 55 GWDADYGYGVVRAALAVQAA-- 74 usage_01007.pdb 50 GWDADYGYGVVRAALAVQAA-- 69 usage_01008.pdb 55 GWDADYGYGVVRAALAVQAAL- 75 usage_01045.pdb 55 GWDADYGYGVVRAALAVQAALG 76 gwdaDyGYGvVraalavqa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################