################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:53 2021 # Report_file: c_0461_73.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00223.pdb # 2: usage_00257.pdb # 3: usage_00325.pdb # 4: usage_00565.pdb # 5: usage_00669.pdb # 6: usage_00670.pdb # 7: usage_00671.pdb # 8: usage_00782.pdb # 9: usage_01065.pdb # # Length: 104 # Identity: 0/104 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/104 ( 2.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/104 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 AGKPKVALV-KS-L-A--NEFFLT-ENGAKEYQKH-NASQFD-LITNGIKDETDTANQIR 52 usage_00257.pdb 1 --KITLGVTYYK-F-D--DNFLAG-RND-IQIAKEKYP-NIE-LLNNDSQ-N-SQSILND 48 usage_00325.pdb 1 ---GKMAIVIST-L-N--NPWFVVLAETAKQRAEQ-LG--YE-ATIFDSQ-N-DTAKESA 47 usage_00565.pdb 1 DKKYTIATVVKV-D-G--IAWFDR-RDGVDQFKAD-TG--N-DVW-VGPS-QADAAAQVQ 49 usage_00669.pdb 1 -----IALLMKT-L-S--NEYFISMRQGAEETAKQ-KD--ID-LIVQVAEKEDSTEQLVG 47 usage_00670.pdb 1 --KPQIALLMKT-L-S--NEYFISMRQGAEETAKQ-KD--ID-LIVQVAEKEDSTEQLVG 50 usage_00671.pdb 1 --KPQIALLMKT-L-S--NEYFISMRQGAEETAKQ-KD--ID-LIVQVA-----TEQLVG 45 usage_00782.pdb 1 --QYYMICIPKV-L-DDSSDFWSVLVEGAQMAAKE-YE--IK-LEFMAPEKEEDYLVQNE 52 usage_01065.pdb 1 ---KKAVLIVNPSSGG--EK-AKEFETLAEEKLKQ-LF--DE-VVVKQTE---KGGDAEQ 47 usage_00223.pdb 53 IVEQ-IVSKVDAIVLAPA--DSKALVPVVKKAVD-AGIIVVNID 92 usage_00257.pdb 49 QIEVLINKGVNVLVINLV--DPTAGQSVIDKAKA-ANIPIILFN 89 usage_00325.pdb 48 HFDAIIAAGYDAIIFNPT--DADGSIANVKRAKE-AGIPVFCV- 87 usage_00565.pdb 50 IVENLIAQGVDAIAIVPF--SVEAVEPVLKKARE-RGIVVISHE 90 usage_00669.pdb 48 LVENMIAKKVDAIIVTPN--DSIAFIPAFQKAEK-AGIPIIDLD 88 usage_00670.pdb 51 LVENMIAKKVDAIIVTPN--DSIAFIPAFQKAEK-AGIPIIDLD 91 usage_00671.pdb 46 LVENMIAKKVDAIIVTPN--DSIAFIPAFQKAEK-AGIPIIDLD 86 usage_00782.pdb 53 LIEEAIKRKPDVILLAAA--DYEKTYDAAKEIKD-AGIKLIVID 93 usage_01065.pdb 48 FAREAAESHFDSVFVGG-DGTVNEGISGLAE--QAYRPKFGFF- 87 i d i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################