################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:28 2021 # Report_file: c_0439_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00035.pdb # 5: usage_00041.pdb # 6: usage_00058.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00068.pdb # # Length: 116 # Identity: 51/116 ( 44.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/116 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/116 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 56 usage_00016.pdb 1 ----TGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHG 56 usage_00017.pdb 1 -----GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 55 usage_00035.pdb 1 -----GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 55 usage_00041.pdb 1 -----GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 55 usage_00058.pdb 1 AAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 60 usage_00064.pdb 1 -----GFVD-IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHG 54 usage_00065.pdb 1 -----GFVD-IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHG 54 usage_00066.pdb 1 -----GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 55 usage_00067.pdb 1 -----GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 55 usage_00068.pdb 1 ----TGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHG 56 G EKAL AVA VGP SVA DA SF FY G Y C S H usage_00001.pdb 57 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 108 usage_00016.pdb 57 VLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 112 usage_00017.pdb 56 VLAVGYGESK----GNKHWIIKNSWGENWGMGGYIKMARNKNNACGIANLASFPKM 107 usage_00035.pdb 56 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 107 usage_00041.pdb 56 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 107 usage_00058.pdb 61 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 112 usage_00064.pdb 55 VLVVGYGFES-----NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 105 usage_00065.pdb 55 VLVVGYGFES-----NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 105 usage_00066.pdb 56 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 107 usage_00067.pdb 56 VLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 107 usage_00068.pdb 57 VLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 112 VL VGYG K W KNSWG WG GY A N CGIA AS P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################