################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:31 2021 # Report_file: c_0658_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00246.pdb # 2: usage_00276.pdb # 3: usage_00277.pdb # 4: usage_00721.pdb # 5: usage_00722.pdb # 6: usage_00723.pdb # 7: usage_01101.pdb # 8: usage_01216.pdb # 9: usage_01217.pdb # # Length: 83 # Identity: 1/ 83 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 83 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/ 83 ( 68.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00246.pdb 1 -SSVNKTITVEYQKPNENRTANL--------------QSMFTNIDTK-------NHTVEQ 38 usage_00276.pdb 1 -SSVNKTITVEYQKPNENRTANL--------------QSMFTNIDTK-------NHTVEQ 38 usage_00277.pdb 1 -SSVNKTITVEYQKPNENRTANL--------------QSMFTNIDTK-------NHTVEQ 38 usage_00721.pdb 1 DKETSKNVKVEYQKPIVKDESNI--------------QSIFSHLDTT-------KHEVEQ 39 usage_00722.pdb 1 -KETSKNVKVEYQKPIVKDESNI--------------QSIFSHLDTT-------KHEVEQ 38 usage_00723.pdb 1 -KETSKNVKVEYQKPIVKDESNI--------------QSIFSHLDTT-------KHEVEQ 38 usage_01101.pdb 1 -------HFNRTVP---------VFYPADDNQKELEWPGGCEDPRVAVTEDGLYVL-YTQ 43 usage_01216.pdb 1 --SVNKTITVEYQKPNENRTANL--------------QSMFTNIDTK-------NHTVEQ 37 usage_01217.pdb 1 -SSVNKTITVEYQKPNENRTANL--------------QSMFTNIDTK-------NHTVEQ 38 veyqk qs f dt h veQ usage_00246.pdb 39 TIYINPLRYSAKETNVNI----- 56 usage_00276.pdb 39 TIYINPLRYSAKETNVNI----- 56 usage_00277.pdb 39 TIYINPLRYSAKETNVNI----- 56 usage_00721.pdb 40 TIYVNPLKLNAKNTNVTIK---- 58 usage_00722.pdb 39 TIYVNPLKLNAKNTNVTI----- 56 usage_00723.pdb 39 TIYVNPLKLNAKNTNVTI----- 56 usage_01101.pdb 44 WNRK---------------QARL 51 usage_01216.pdb 38 TIYINPLRYSAKETNVNI----- 55 usage_01217.pdb 39 TIYINPLRYSAKETNVNI----- 56 tiy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################