################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:55 2021 # Report_file: c_0760_87.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00112.pdb # 2: usage_00131.pdb # 3: usage_00137.pdb # 4: usage_00146.pdb # 5: usage_00209.pdb # 6: usage_00381.pdb # 7: usage_00384.pdb # 8: usage_00386.pdb # 9: usage_00401.pdb # 10: usage_00531.pdb # 11: usage_00788.pdb # # Length: 78 # Identity: 0/ 78 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 78 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 78 ( 42.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 -VLYVGGLA------------EEVDDKVLHAAFIPFGDITDIQIPLDYETEKH-RGFAFV 46 usage_00131.pdb 1 FHVFVGDLS------------PEITTEDIKSAFAPFGKISDARVVKDMATGKS-KGYGFV 47 usage_00137.pdb 1 KTLYVGGIDGALNSKHLKPAQ---IESRIRFVFSRLGDIDRIRYVES-------KNCGFV 50 usage_00146.pdb 1 -NVFLGNLP------------NGITEDEIREDLEPFGPIDQIKIVTE-------RNIAFV 40 usage_00209.pdb 1 KTLVLSNLS------------YSATEETLQEVFE---KATFIKVPQNQ-NGKS-KGYAFI 43 usage_00381.pdb 1 NTVFVGGID------------VRMDETEIRSFFARYGSVKEVKIITDR-TGVS-KGYGFV 46 usage_00384.pdb 1 -RVLVSGLP------------PSGSWQDLKDHMREAGDVCYADVQ-K-------DGMGMV 39 usage_00386.pdb 1 -GILIRGLP------------GDVTNQEVHDLLSDYE-LKYCFVDKY-------KGTAFV 39 usage_00401.pdb 1 KKIFVGGLS------------PDTPEEKIREYFGGFGEVESIELPMDNKTNKR-RGFCFI 47 usage_00531.pdb 1 -TLYVGNLS------------FYTTEEQIYELFSKSGDIKKIIMGLDKMKKTA-CGFCFV 46 usage_00788.pdb 1 RTVFCMQLA------------ARIRPRDLEEFFSTVGKVRDVRMISDR-NSRRSKGIAYV 47 usage_00112.pdb 47 EFELAEDAAAAIDN---- 60 usage_00131.pdb 48 SFYNKLDAENAIVHM--- 62 usage_00137.pdb 51 KFKYQANAEFAKEAM--- 65 usage_00146.pdb 41 HFLNIAAAIKAVQELPLN 58 usage_00209.pdb 44 EFASFEDAKEALNS---- 57 usage_00381.pdb 47 SFYNDVDVQKIVES---- 60 usage_00384.pdb 40 EYLRKEDMEYALR----- 52 usage_00386.pdb 40 TLLNGEQAEAAINTFH-- 55 usage_00401.pdb 48 TFKEEEPVKKIMEKK--- 62 usage_00531.pdb 47 EYYSRADAENAMR----- 59 usage_00788.pdb 48 EFVDVSSVPLAIGL---- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################