################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:07 2021 # Report_file: c_0212_24.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00031.pdb # 2: usage_00059.pdb # 3: usage_00091.pdb # 4: usage_00206.pdb # 5: usage_00234.pdb # 6: usage_00360.pdb # 7: usage_00361.pdb # 8: usage_00362.pdb # 9: usage_00363.pdb # 10: usage_00364.pdb # 11: usage_00369.pdb # 12: usage_00386.pdb # # Length: 103 # Identity: 41/103 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/103 ( 59.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/103 ( 9.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 --QLVESGGGLVQPGGSLRLSCAASESILSFNHMAWYRQGPGEQRELVAVI-T-REGSTD 56 usage_00059.pdb 1 --QLVESGGGLVRPGGSLRLSCAASGSIFTIYAMGWYRQAPGKQRELVARI-T-FGGDTN 56 usage_00091.pdb 1 -VQLVESGGGSVQAGGSLRLSCAVSGYKDRNYCMGWFRRAPGKEREGVAVI-D-SSGRTA 57 usage_00206.pdb 1 --QPQESGGGLAQAGGSLRLSCVVSGITFASEAWGWYRRAPGKQRELIAAI-N-NEGRTN 56 usage_00234.pdb 1 -VQLVESGGGLAQPGGSLRLSCAASGSTISSVAVGWYRQTPGNQREWVATSSTS-STTAT 58 usage_00360.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGSTFGIRTMGWYRQAPGKQRDLVAII-S-SGGSTD 58 usage_00361.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGSTFGIRTMGWYRQAPGKQRDLVAII-S-SGGSTD 58 usage_00362.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGSTFGIRTMGWYRQAPGKQRDLVAII-S-SGGSTD 58 usage_00363.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGSTFGIRTMGWYRQAPGKQRDLVAII-S-SGGSTD 58 usage_00364.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGSTFGIRTMGWYRQAPGKQRDLVAII-S-SGGSTD 58 usage_00369.pdb 1 --QLVESGGGTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGI-D-NDGTTT 56 usage_00386.pdb 1 --QLQESGGGLVQPGGSLRLSCAASGSIFSGNAMGWYRQAPGKQRELVAAI-T-SGGSTD 56 Ql ESGGG GGSLRLSCa Sg WyR PG R va i g t usage_00031.pdb 57 YADSVKGRFTISRDNAKNMVYLLMSNLRPEDTAVYYCN----- 94 usage_00059.pdb 57 YADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCNAEET- 98 usage_00091.pdb 58 YADSVKGRFTISRDVALDTAYLQMNSLKPEDTAMYYCA----- 95 usage_00206.pdb 57 YVDSVKGRFTVSRDNAKNVMYLQMNSLKPEDTAVYYCN----- 94 usage_00234.pdb 59 YADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCK----- 96 usage_00360.pdb 59 YADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAIYYCN----- 96 usage_00361.pdb 59 YADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAIYYCN----- 96 usage_00362.pdb 59 YADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAIYYCN----- 96 usage_00363.pdb 59 YADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAIYYCN----- 96 usage_00364.pdb 59 YADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAIYYCN----- 96 usage_00369.pdb 57 YVDSVAGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSLRY 99 usage_00386.pdb 57 YADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCH----- 94 Y DSVkGRFTiSrdnAkn YLqM sLkPeDTA YYC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################