################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:42 2021 # Report_file: c_0212_6.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00005.pdb # 2: usage_00040.pdb # 3: usage_00075.pdb # 4: usage_00126.pdb # 5: usage_00136.pdb # 6: usage_00167.pdb # 7: usage_00174.pdb # 8: usage_00192.pdb # 9: usage_00270.pdb # 10: usage_00321.pdb # 11: usage_00384.pdb # 12: usage_00392.pdb # # Length: 95 # Identity: 23/ 95 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 95 ( 32.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 95 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -VMTQSPKFMSTSVGDRVTITCKASQDVS----TAVVWYQQKPGQSPKLLIYWASTRHIG 55 usage_00040.pdb 1 IQMTQSPSSLSASVGDRVTITCRASQSIS----SYLNWYQQKPGKAPKLLIYAASSLQSG 56 usage_00075.pdb 1 IILTQSPAIMSASPGEKVTMTCSASSDIS-----YMHWYQQKSDTSPKIWIYDTSKLASG 55 usage_00126.pdb 1 -VMTQSPKSMSMSVGERVTLTCKASENVV----TYVSWYQQKPEQSPKLLIYGASNRYTG 55 usage_00136.pdb 1 IVLTQSPGTQSLSPGERATLSCRASQSVG---NNKLAWYQQRPGQAPRLLIYGASSRPSG 57 usage_00167.pdb 1 VVLTQSPGIMSASPGEKVTITCSASSSVS-----YMYWFQQKPGTSPKLWIYSTSNLASG 55 usage_00174.pdb 1 -QMTQSPASLSASVGETVTITCRASGNIH----NFLAWYQQKQGKSPQVLVYNAKTLADG 55 usage_00192.pdb 1 -QLTQSPSSLSASLGDKVTITCRASQHIK----KYLNWYQQKPGKAPKLLIYGALNLQSG 55 usage_00270.pdb 1 IQMTQSPSSLSASVGDRITITCRASQAFD----NYVAWYQQRPGKVPKLLISAASALHAG 56 usage_00321.pdb 1 -VLTQSPSSLSASLGDTITITCHASQNIN----LWLSWYQQRPGNIPKLLIYRASNLHTG 55 usage_00384.pdb 1 -VMTQSPATLSVTPGDRVSLSCRASQSIG----DYLHWYQQKSHESPRLLINYASQSISG 55 usage_00392.pdb 1 IVLTQSPASLAVSLGQRATIFCRASQSVDYNGISYMHWFQQKPGQPPKLLIYAASNPESG 60 TQSP s s G t C AS W QQ P i G usage_00005.pdb 56 VPDRFAGSGSGTDYTLTISSVQAEDLALYYCQQHY 90 usage_00040.pdb 57 VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ--- 88 usage_00075.pdb 56 VPARFSGSGSGTSYSLTISTMEAEDAATYYCHQRS 90 usage_00126.pdb 56 VPDRFTGSGSATDFTLTISSVQAEDLADYHCGQGY 90 usage_00136.pdb 58 VADRFSGSG--TDFTLTISRLEPEDFAVYYCQQYG 90 usage_00167.pdb 56 VPARFRGSGSGTSYSLTISRMEAEDAATYYCQQRS 90 usage_00174.pdb 56 VPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFW 90 usage_00192.pdb 56 VPSRFSGRGSGTDFTLTISSLQPEDFATYYCQQSY 90 usage_00270.pdb 57 VPSRFSGSGSGTHFTLTISSLQPEDVATYYCQN-- 89 usage_00321.pdb 56 VPSRFSGSGSATGFTLTISSLQPEDIATYYCQQGH 90 usage_00384.pdb 56 IPSRFSGSGSGSDFTLIINSVEPEDVGVYYCQNGH 90 usage_00392.pdb 61 IPARFTGSGSGTDFTLNIHPVEEEDAATYYCQQII 95 p RF GsG t L I ED YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################