################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:40 2021 # Report_file: c_1089_54.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00227.pdb # 2: usage_01720.pdb # 3: usage_01721.pdb # 4: usage_01722.pdb # 5: usage_01723.pdb # 6: usage_01724.pdb # 7: usage_01725.pdb # 8: usage_01726.pdb # 9: usage_01727.pdb # # Length: 98 # Identity: 24/ 98 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 98 ( 76.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 98 ( 23.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00227.pdb 1 -HPA-RDMWDTFWLT-GEGFRLEG---PLGEEV----EGRLLLRTHTSPMQVRYMVAHT- 49 usage_01720.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01721.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01722.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01723.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01724.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01725.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01726.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 usage_01727.pdb 1 PMDYVQRVKR-----THSQGGY--GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQ 53 mdy qrvkr hsqggy gykynw arknLLRTHTtsasaRalyrla usage_00227.pdb 50 ----PPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVV- 82 usage_01720.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01721.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01722.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01723.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01724.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01725.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01726.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA- 90 usage_01727.pdb 54 KKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVAD 91 tPvkyfsidRVFRnEtlDATHlAeFHQiEGvVa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################