################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:13 2021 # Report_file: c_0109_17.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00046.pdb # 2: usage_00055.pdb # 3: usage_00081.pdb # 4: usage_00082.pdb # 5: usage_00144.pdb # # Length: 232 # Identity: 47/232 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/232 ( 33.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/232 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 PPEDIERIATDMDIMIDSFRALGGAFKGYKASKEARRRVEDWLEEQIIETRKGNIHPPEG 60 usage_00055.pdb 1 ----AGNRAGELRALFDAAGS---ASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSG 53 usage_00081.pdb 1 ------ERADDFIDMVDAFGA---VGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSG 51 usage_00082.pdb 1 ----VKERADDFIDMVDAFGA---VGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSG 53 usage_00144.pdb 1 ----AGNRAGELRALFDAAGS---ASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSG 53 rA Da g prh r AR R W Ie RaG sG usage_00046.pdb 61 TALYEFAHWEDYLGNPMDSRTCAIDLMNTFRPLIAINRFVSFGLHAMNENPITREKIKSE 120 usage_00055.pdb 54 TAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVHIAVYITFVAHALQTCSGIRAALVQQ 113 usage_00081.pdb 52 TALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG 111 usage_00082.pdb 54 TALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG 113 usage_00144.pdb 54 TAAYAIAWHRDRHDDLLSPHVAAVELVNVLEPTVAIAVYITFVAHALQTCSGIRAALVQQ 113 TA A h l aA eL NvlrP vaI F a Al l usage_00046.pdb 121 -PDYAYKFAQEVRRYYPFVPFLPGKAKVDIDFQGVTIPAGVGLALDVYGTTHDESLWDDP 179 usage_00055.pdb 114 -PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 172 usage_00081.pdb 112 NSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHP 171 usage_00082.pdb 114 NSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHP 173 usage_00144.pdb 114 -PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 172 e FvQEVRR YPF P a Df w f G v LDlYG nHD W P usage_00046.pdb 180 NEFRPERFETWDGSPFDLIPQGGGDYWTNHRCAGEWITVIIMEETMKYFA-- 229 usage_00055.pdb 173 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 224 usage_00081.pdb 172 DEFRPERFA------------------------------------------- 180 usage_00082.pdb 174 DEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLV-- 223 usage_00144.pdb 173 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 224 EFRPERF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################