################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:30 2021 # Report_file: c_1133_42.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00026.pdb # 2: usage_00333.pdb # 3: usage_00415.pdb # 4: usage_00416.pdb # 5: usage_00417.pdb # 6: usage_00418.pdb # 7: usage_00419.pdb # 8: usage_00428.pdb # 9: usage_00429.pdb # 10: usage_00430.pdb # 11: usage_00431.pdb # # Length: 65 # Identity: 11/ 65 ( 16.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 65 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 65 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 ---YKDNFTAAGY-TTLEAVVHM---SQDDLARIGITAIT----HQNKILSSVQAMRTQM 49 usage_00333.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00415.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00416.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00417.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00418.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00419.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00428.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00429.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00430.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 usage_00431.pdb 1 KEAYEEAF----YDFEPEKVAQMTAQDIDRLMTFP-----NIVHHRKKLEAIVNQAQGYL 51 YeeaF Y fepEkVaqM diDrLmtfp HrkKleaiVnqaqgyl usage_00026.pdb 50 QQMHG 54 usage_00333.pdb 52 KIEQA 56 usage_00415.pdb 52 KIEQA 56 usage_00416.pdb 52 KIEQA 56 usage_00417.pdb 52 KIEQA 56 usage_00418.pdb 52 KIEQA 56 usage_00419.pdb 52 KIEQA 56 usage_00428.pdb 52 KIEQA 56 usage_00429.pdb 52 KIEQA 56 usage_00430.pdb 52 KIEQA 56 usage_00431.pdb 52 KIEQA 56 kieqa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################