################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:06 2021 # Report_file: c_0109_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00035.pdb # 3: usage_00049.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00052.pdb # # Length: 217 # Identity: 49/217 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 143/217 ( 65.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/217 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -EPLMLKLTQDFFG-----VEAARRFHETIATFYDYFNGFTVDRRSCPKDDVMSLLANSK 54 usage_00035.pdb 1 DWTQFDGWTQAIVAT--------TGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAG 52 usage_00049.pdb 1 --------------------------LDAVGSMMAYFTGLIERRRTEPADDAISHLVAAG 34 usage_00050.pdb 1 --------------------------LDAVGSMMAYFTGLIERRRTEPADDAISHLVAAG 34 usage_00051.pdb 1 -WTQFDGWTQAIVA-ANA-----G-ALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAG 52 usage_00052.pdb 1 -WTQFDGWTQAIVA-ANAV----G-ALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAG 53 ldavgsmmaYFtGlierRRtePaDDaiShLvaag usage_00008.pdb 55 LD----GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPALIPR 110 usage_00035.pdb 53 --VGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPD 110 usage_00049.pdb 35 --VGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPD 92 usage_00050.pdb 35 --VG--GDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPD 90 usage_00051.pdb 53 --V---GDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPD 107 usage_00052.pdb 54 --VGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPD 111 GdtagtlsIlAftftmvTgGnDTvtgmlGGsmplLhRrPdQrrLlldDPegIPd usage_00008.pdb 111 LVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNP-DEFDIT 169 usage_00035.pdb 111 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAE---- 166 usage_00049.pdb 93 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 152 usage_00050.pdb 91 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 150 usage_00051.pdb 108 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 167 usage_00052.pdb 112 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 171 aVeEllRlTsPVqglaRTttrDvtigdttIpaGrRvlLlYgSANRDErqygpd aE usage_00008.pdb 170 RFPNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL 206 usage_00035.pdb ------------------------------------- usage_00049.pdb 153 RCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR- 188 usage_00050.pdb 151 RCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR- 186 usage_00051.pdb 168 RCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR- 203 usage_00052.pdb 172 RCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARC 208 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################