################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:46:43 2021 # Report_file: c_0525_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00027.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00039.pdb # 7: usage_00042.pdb # 8: usage_00043.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00056.pdb # 12: usage_00058.pdb # # Length: 96 # Identity: 18/ 96 ( 18.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 96 ( 29.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 96 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -KIAELITRDFGSFEKFKEDFSAAAVGHFGSGWVWLIADD---GKLKIVQGHDAGNPIRE 56 usage_00035.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00036.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00037.pdb 1 -KLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 57 usage_00038.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00039.pdb 1 -EVADKINDKYGSFEKFQEEFAAAAAGRFGSGWAWLVVNN---GEIEIMSTPIQDNPLME 56 usage_00042.pdb 1 --VAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDG---EELSVMSTPNQDTPLQE 55 usage_00043.pdb 1 --VAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDG---EELSVMSTPNQDTPLQE 55 usage_00054.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00055.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00056.pdb 1 GKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN--GKLSIEKEPNAGNPVRK 58 usage_00058.pdb 1 -SLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDK-ELKKLVVDTTANQDPLVTK 58 I f f a fGSG WL d l p usage_00027.pdb 57 S--KTPLMNIDVWEHAYYIDYRNARAQYVKNYWNLV 90 usage_00035.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00036.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00037.pdb 58 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 91 usage_00038.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00039.pdb 57 G--KKPILGLDVWEHAYYLKYQNKRPDYISAFWNVV 90 usage_00042.pdb 56 G--KIPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTV 89 usage_00043.pdb 56 G--KIPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTV 89 usage_00054.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00055.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00056.pdb 59 G--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIV 92 usage_00058.pdb 59 GGSLVPLVGIDVWEHAYYLQYKNVRPEYLKN----- 89 g Pl DVWEHAYYl Y N R #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################