################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:00 2021 # Report_file: c_1023_41.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00068.pdb # 2: usage_00069.pdb # 3: usage_00133.pdb # 4: usage_00263.pdb # 5: usage_00739.pdb # 6: usage_00740.pdb # 7: usage_00741.pdb # # Length: 68 # Identity: 38/ 68 ( 55.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 68 ( 95.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 68 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 usage_00069.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 usage_00133.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 usage_00263.pdb 1 VVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVG-GAYGLRPVVEIQF 59 usage_00739.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 usage_00740.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 usage_00741.pdb 1 AVIFGEDV-AFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 59 aVifGeDV aFGGVFRCTvGLrdKYGKdRVFntPlcEqGIVGfgiG avtGataiaEIQF usage_00068.pdb 60 ADYIFPA- 66 usage_00069.pdb 60 ADYIFPA- 66 usage_00133.pdb 60 ADYIFPA- 66 usage_00263.pdb 60 ADYFYPAS 67 usage_00739.pdb 60 ADYIFPA- 66 usage_00740.pdb 60 ADYIFPA- 66 usage_00741.pdb 60 ADYIFPA- 66 ADYifPA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################