################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:22:12 2021 # Report_file: c_0143_15.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00015.pdb # 2: usage_00102.pdb # 3: usage_00122.pdb # 4: usage_00203.pdb # 5: usage_00228.pdb # 6: usage_00229.pdb # 7: usage_00244.pdb # 8: usage_00271.pdb # 9: usage_00316.pdb # 10: usage_00339.pdb # # Length: 114 # Identity: 75/114 ( 65.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/114 ( 84.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/114 ( 3.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 DIVMTQAAPSVPVTPGESLSISCRSSKSLLHSNGDTFLYWFLQRPGQSPQLLIYRMSNLA 60 usage_00102.pdb 1 -IVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLA 59 usage_00122.pdb 1 -IVMTQATPSIPVTPGESVSISCRSNKSLLHSNGNTYLYWFLQRPGQSPRLLIFRMSNLA 59 usage_00203.pdb 1 -IVMTQAAFSNPVTLGTSASISCRSSKSLLHSNGITYLYWYLQRPGQSPQLLIYRMSNLA 59 usage_00228.pdb 1 -IVMTQAAPSVSVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLA 59 usage_00229.pdb 1 DIVMTQAAPSVSVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLA 60 usage_00244.pdb 1 DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLA 60 usage_00271.pdb 1 DIVMTQAAPSVPVTPGESVSISCRSTKSLLHSNGNTYLYWFLQRPGQSPQRLIYYMSNLA 60 usage_00316.pdb 1 DIVMTQTAPSVFVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLA 60 usage_00339.pdb 1 -IVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLA 59 IVMTQaapS VTpGeS SISCRS KSLLHSNG TyL WfLQRPGQSPqlLIyr SNLA usage_00015.pdb 61 SGVPDRFSGSGSGTAFTLRVSRVEAEDVGVYYCMQHLEYPFTFGAGTKLEL--- 111 usage_00102.pdb 60 SGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRA 113 usage_00122.pdb 60 SGVPDRFSGSGSGTAFTLRISRVEAADVGIYFCLQHLEYPFTFGAGTKLEL--- 110 usage_00203.pdb 60 SGVPDRFSGSGSGTDFALRISRVEAEDVGVYYCGQMLEHPLTFGTGTKLEL--- 110 usage_00228.pdb 60 SGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCLQHLEYPFTFGAGTKLEL--- 110 usage_00229.pdb 61 SGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCLQHLEYPFTFGAGTKLEL--- 111 usage_00244.pdb 61 SGVPDRFSGSGSGTAFTLRISKVEAEDVGVYYCMQHLEYPYTFGGGTKLDV--- 111 usage_00271.pdb 61 SGVPDRFSGRGSGTDFTLRISRVEAEDAGVYYCMQSLEYPYTFGGGTKLEI--- 111 usage_00316.pdb 61 SGVPDRFSGSGSGTDFTLRISRVEAEDVGVYYCMQHLEYPVTFGAGTKVEI--- 111 usage_00339.pdb 60 SGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRA 113 SGVPDRFSGsGSGT FtLR SrVEAeDvGvYyC Q LEyP TFG GTKle #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################