################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:23 2021 # Report_file: c_1163_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00245.pdb # 2: usage_00246.pdb # 3: usage_00448.pdb # 4: usage_00449.pdb # 5: usage_00681.pdb # 6: usage_00682.pdb # 7: usage_00683.pdb # 8: usage_00691.pdb # # Length: 49 # Identity: 20/ 49 ( 40.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 49 ( 65.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 49 ( 34.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00245.pdb 1 --RTLSYRTGLKITSLTEVVCGLDLCNQ--GN-------YLECISCGSS 38 usage_00246.pdb 1 -NRTLSYRTGLKITSLTEVVCGLDLCNQ--GN----R--YLECISCGSS 40 usage_00448.pdb 1 -NRTLSYRTGLKITSLTEVVCGLDLCNQ--GN-----SG--ECISCGS- 38 usage_00449.pdb 1 -NRTLSYRTGLKITSLTEVVCGLDLCNQ--GN-----SG--ECISCGS- 38 usage_00681.pdb 1 -NRTLSYRTGLKITSLTEVVCGLDLCNQ--GNSGRSR--YLECISCG-- 42 usage_00682.pdb 1 TNRTLSYRTGLKITSLTEVVCGLDLCNQ--G--------YLECISCG-- 37 usage_00683.pdb 1 TNRTLSYRTGLKITSLTEVVCGLDLCNQSR---------YLECISCG-- 38 usage_00691.pdb 1 -NRTMSYRMGSMIISLTETVCATNLCNR--PR-----P-YLECASCT-- 38 RTlSYRtGlkItSLTEvVCgldLCNq ECiSCg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################