################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:14 2021 # Report_file: c_1394_111.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00234.pdb # 2: usage_00240.pdb # 3: usage_00367.pdb # 4: usage_00422.pdb # 5: usage_00424.pdb # 6: usage_00455.pdb # 7: usage_00881.pdb # 8: usage_00966.pdb # 9: usage_00969.pdb # 10: usage_00970.pdb # 11: usage_00992.pdb # 12: usage_01185.pdb # 13: usage_01258.pdb # # Length: 71 # Identity: 45/ 71 ( 63.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 71 ( 63.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 71 ( 36.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00240.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00367.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00422.pdb 1 P-KEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 59 usage_00424.pdb 1 ----------------LVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 44 usage_00455.pdb 1 PPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 60 usage_00881.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00966.pdb 1 ----------------LVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 44 usage_00969.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00970.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_00992.pdb 1 ------------IQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 48 usage_01185.pdb 1 ----------------LVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 44 usage_01258.pdb 1 --KEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA 58 LVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVA usage_00234.pdb 49 LI--------- 50 usage_00240.pdb 49 LILTPALCATM 59 usage_00367.pdb 49 LI--------- 50 usage_00422.pdb 60 LILTPALCAT- 69 usage_00424.pdb 45 LILTPALCAT- 54 usage_00455.pdb 61 LILTPALCAT- 70 usage_00881.pdb 49 LI--------- 50 usage_00966.pdb 45 LI--------- 46 usage_00969.pdb 49 LI--------- 50 usage_00970.pdb 49 LI--------- 50 usage_00992.pdb 49 L---------- 49 usage_01185.pdb 45 LI--------- 46 usage_01258.pdb 59 LILTPALCAT- 68 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################