################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:26 2021 # Report_file: c_0925_124.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00131.pdb # 2: usage_00308.pdb # 3: usage_00374.pdb # 4: usage_00429.pdb # 5: usage_00895.pdb # 6: usage_01212.pdb # 7: usage_01323.pdb # 8: usage_01324.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 62 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 62 ( 72.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 -TGWEVPDMFELPV--EGT--EETTWVVMMTPAEGS-----PAG-GNGVLAIT------- 42 usage_00308.pdb 1 --IHKKGQAHWES--------------------D----------IK-RGKGTVSTESGVL 27 usage_00374.pdb 1 H-AMLITGCHVD-E----T--SKLPLRYRVENSWGKDSGKD------GLYVMT------- 39 usage_00429.pdb 1 --AVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGER------GFINIE------- 45 usage_00895.pdb 1 H-AVILVGYGMKD---------EKFYYYIIKNSWGSDWGEG------GYINLE------- 37 usage_01212.pdb 1 H-GVLVVGYGFES-----------NKYWLVKNSWGEEWGMG------GYVKMA------- 35 usage_01323.pdb 1 --AVMLVGFGMKEI---VN--GEKHYYYIIKNSWGQQWGER------GFINIE------- 40 usage_01324.pdb 1 --AVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGER------GFINIE------- 45 g usage_00131.pdb -- usage_00308.pdb 28 NQ 29 usage_00374.pdb -- usage_00429.pdb -- usage_00895.pdb -- usage_01212.pdb -- usage_01323.pdb -- usage_01324.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################