################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:02 2021 # Report_file: c_1199_118.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00143.pdb # 2: usage_00334.pdb # 3: usage_00335.pdb # 4: usage_00336.pdb # 5: usage_00536.pdb # 6: usage_00695.pdb # 7: usage_00716.pdb # 8: usage_00719.pdb # 9: usage_00720.pdb # 10: usage_00721.pdb # 11: usage_01027.pdb # 12: usage_01455.pdb # 13: usage_01973.pdb # 14: usage_01974.pdb # 15: usage_02066.pdb # 16: usage_02069.pdb # 17: usage_02276.pdb # # Length: 29 # Identity: 9/ 29 ( 31.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 29 ( 89.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 29 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00143.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00334.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00335.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00336.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00536.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00695.pdb 1 EQEILVTGIKVVDLLAPYAKGGKIGLFG- 28 usage_00716.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00719.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00720.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_00721.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_01027.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_01455.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_01973.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_01974.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_02066.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_02069.pdb 1 --EILVTGIKVVDLLAPYAKGGKIGLFGG 27 usage_02276.pdb 1 --VPMITGQRVIDTFFPVTKGGAAAVPG- 26 eilvTGikVvDllaPyaKGGkiglfG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################