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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:08:03 2021
# Report_file: c_1138_63.html
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#====================================
# Aligned_structures: 4
#   1: usage_00290.pdb
#   2: usage_00291.pdb
#   3: usage_00534.pdb
#   4: usage_00535.pdb
#
# Length:        140
# Identity:       40/140 ( 28.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     40/140 ( 28.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/140 ( 15.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00290.pdb         1  L---------WVE----GVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGII   47
usage_00291.pdb         1  L---------WVE----GVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGII   47
usage_00534.pdb         1  -TMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVI   59
usage_00535.pdb         1  -TMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVI   59
                                            G  E        F LV    V        LY      L SG I

usage_00290.pdb        48  GTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTIN----RRRRD-YPNRAVAL  102
usage_00291.pdb        48  GTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTIN----RRRRD-YPNRAVAL  102
usage_00534.pdb        60  GIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGG-A-NFPYKATFW  117
usage_00535.pdb        60  GIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGG-A-NFPYKATFW  117
                           G GHHY   G P  W  LG VFSALE  P     L A                P  A   

usage_00290.pdb       103  WAMGTTVMAFLGAGVWGFM-  121
usage_00291.pdb       103  WAMGTTVMAFLGAGVWGFMH  122
usage_00534.pdb       118  FLISTAIWNLVGAGVFGFL-  136
usage_00535.pdb       118  FLISTAIWNLVGAGVFGFL-  136
                               T      GAGV GF  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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