################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:25:47 2021 # Report_file: c_0143_10.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00026.pdb # 2: usage_00028.pdb # 3: usage_00065.pdb # 4: usage_00079.pdb # 5: usage_00080.pdb # 6: usage_00083.pdb # 7: usage_00089.pdb # 8: usage_00129.pdb # 9: usage_00172.pdb # 10: usage_00173.pdb # 11: usage_00243.pdb # 12: usage_00251.pdb # 13: usage_00252.pdb # 14: usage_00257.pdb # 15: usage_00325.pdb # 16: usage_00326.pdb # 17: usage_00345.pdb # 18: usage_00346.pdb # 19: usage_00347.pdb # 20: usage_00348.pdb # # Length: 110 # Identity: 43/110 ( 39.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/110 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/110 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 DIELTQSPAIMAASPGEKVTITCSATSGVNY--MHWFQQKPGTSPKLWIYSTSNLASAVP 58 usage_00028.pdb 1 QIVLTQSPAIMSASPGEKVTMTCSASSSVSY--MHWYQQKSGTSPKRWIYDTSKLASGVP 58 usage_00065.pdb 1 -NVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVP 59 usage_00079.pdb 1 -IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVP 59 usage_00080.pdb 1 -IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVP 59 usage_00083.pdb 1 EIVLTQSPAITAASLGQKVTITCSASSSVSY--MHWYQQKSGTSPKPWIYEISKLASGVP 58 usage_00089.pdb 1 --VLTQSPAIMSASPGEKVTITCSASSSVSY--MHWFQQKPGTSPKLWIYSTSNLASGVP 56 usage_00129.pdb 1 -IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVP 59 usage_00172.pdb 1 --VLTQSPAIMSASPGEKVTITCSASSSVSY--MHWFQQKPGTSPKLWIYSTSNLASGVP 56 usage_00173.pdb 1 --VLTQSPAIMSASPGEKVTITCSASSSVSY--MHWFQQKPGTSPKLWIYSTSNLASGVP 56 usage_00243.pdb 1 --VLTQSPAIMSASPGEKVTISCSASSSVSY--MYWYHQKPGSSPKPWIYRTSNLASGVP 56 usage_00251.pdb 1 -IVLTQSPAIMSASPGEKVTMTCSASSSVSY--MNWYQQKSGTSPKRWIYDTSKLASGVP 57 usage_00252.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASSSVSY--MNWYQQKSGTSPKRWIYDTSKLASGVP 56 usage_00257.pdb 1 --VLTQSPAIMSASLGERVTMTCTASSSVSSSNLHWYQQKPGSSPKLWIYSTSNLASGVP 58 usage_00325.pdb 1 -IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVP 59 usage_00326.pdb 1 -IVLTQTPAIMSASLGERVTMTCTANSSVSSNYFHWYQQKPGSSPKLWIYSTSNLASGVP 59 usage_00345.pdb 1 QIVLTRTGGIMSASPGEKVTMTCSASSSVSY--MHWYQQKSGTSPKIWIYESSKLASGVP 58 usage_00346.pdb 1 DIVLTQSPAIMSAAPGDKVTMTCSASSSVSY--IHWYQQKSGTSPKRWIYDTSKLTSGVP 58 usage_00347.pdb 1 QIVSTQSPAIMSASPGEKVTMTCSASSSRSY--MQWYQQKPGTSPKRWIYDTSKLASGVP 58 usage_00348.pdb 1 QIVSTQSPAIMSASPGEKVTMTCSASSSRSY--MQWYQQKPGTSPKRWIYDTSKLASGVP 58 v Tq paIm as G VT tC A Ss W qQK G SPK WIY S LaSgVP usage_00026.pdb 59 ARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSTYPFTFGGGTKLEL--- 105 usage_00028.pdb 59 ARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPPTFGGGTKLEL--- 105 usage_00065.pdb 60 ARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEM--- 106 usage_00079.pdb 60 ARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI--- 106 usage_00080.pdb 60 ARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI--- 106 usage_00083.pdb 59 ARFSGSGSGTSYSLTISSMEAEDAAIYYCQQWNYPFTFGSGTKLEI---- 104 usage_00089.pdb 57 ARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLEL--- 103 usage_00129.pdb 60 ARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI--- 106 usage_00172.pdb 57 ARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPFTFGGGTKLEI--- 103 usage_00173.pdb 57 ARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPFTFGGGTKLEI--- 103 usage_00243.pdb 57 ARFSGSGSGTSYSLTISSMEAEDAATYYCQQYHSYPLTFGAGTKLEL--- 103 usage_00251.pdb 58 AHFRGSGSGTSYSLTISGMEAEDAATYYCQQWSSNPPTFGSGTKLEINRA 107 usage_00252.pdb 57 AHFRGSGSGTSYSLTISGMEAEDAATYYCQQWSSNPPTFGSGTKLEINRA 106 usage_00257.pdb 59 ARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPYTFGGGTKLEI--- 105 usage_00325.pdb 60 ARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI--- 106 usage_00326.pdb 60 TRFSGSGSGTSYSLTLSSMEAEDAATYYCHQYHRSPPTFGSGTKLKM--- 106 usage_00345.pdb 59 VRFSGSGSGTSYSLTISSMEAEDVATYYCQQWSSHPLTFGAGTKLEL--- 105 usage_00346.pdb 59 VRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEI--- 105 usage_00347.pdb 59 ARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSS--YTFGGGTKLEI--- 103 usage_00348.pdb 59 ARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSS--YTFGGGTKLEI--- 103 F GSGSGTSYSLTis mEAEDaA Y C Q tfg gtkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################