################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:22 2021 # Report_file: c_1434_323.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00126.pdb # 2: usage_00127.pdb # 3: usage_00128.pdb # 4: usage_00165.pdb # 5: usage_00170.pdb # 6: usage_00172.pdb # 7: usage_00368.pdb # 8: usage_00544.pdb # 9: usage_01014.pdb # 10: usage_01034.pdb # 11: usage_01035.pdb # 12: usage_01036.pdb # 13: usage_01037.pdb # 14: usage_01038.pdb # 15: usage_01670.pdb # 16: usage_01677.pdb # 17: usage_01708.pdb # 18: usage_02227.pdb # 19: usage_02365.pdb # 20: usage_02932.pdb # 21: usage_03158.pdb # 22: usage_03159.pdb # 23: usage_03421.pdb # # Length: 84 # Identity: 0/ 84 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 84 ( 15.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 84 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00126.pdb 1 ---NKEQQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 38 usage_00127.pdb 1 ----KEQQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_00128.pdb 1 ----KEQQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_00165.pdb 1 ------QQNAFYEILHLPNLNEEQRNGFIQSLKDD-------------------PSQSAN 35 usage_00170.pdb 1 ----KDQQSAFYEILNMPNLNEAQRNGFIQSLKDD-------------------PSQSTN 37 usage_00172.pdb 1 ----KDQQSAFYEILNMPNLNEAQRNGFIQSLKDD-------------------PSQSTN 37 usage_00368.pdb 1 ------QQSAFYEILNMPNLNEAQRNGFIQSLKDD-------------------PSQSTN 35 usage_00544.pdb 1 ---NKEQQNAFYEILHLPNLNEEQRNAFIQSLKDD-------------------PSQSAN 38 usage_01014.pdb 1 NKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDD-------------------PSQSAN 41 usage_01034.pdb 1 ----KEWQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_01035.pdb 1 NKFNKEWQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 41 usage_01036.pdb 1 ----KEWQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_01037.pdb 1 ----KEWQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_01038.pdb 1 ----KEWQNAFYEILHLPNLTEEQRNGFIQSLKDD-------------------PSVSKE 37 usage_01670.pdb 1 ----KEQQNAFYEILHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELS-GS-QSAN 54 usage_01677.pdb 1 ----KEQQNAWYEILHLPNLNEEQRNGFIQSLKDD-------------------PSQSAN 37 usage_01708.pdb 1 ---NKEQQNAFYEILHLPNLNEEQRNAFIQSLKDD-------------------PSQSAN 38 usage_02227.pdb 1 -----KQQNAFYEVLNMPNLNEDQRNAFIQSLKDD-------------------PSQSAN 36 usage_02365.pdb 1 -----EQQNAFYEILHLPNLNEEQRNAFIQSLKDD-------------------PSQSAN 36 usage_02932.pdb 1 --YNDEKKLASNEIANLPNLNEEQRSAFLSSINDD-------------------PSQSAN 39 usage_03158.pdb 1 ---NKEQQNAFYEILHLPNLNEEQRNAFIQSLKDD-------------------PSQSAN 38 usage_03159.pdb 1 ---DEAQQNAFYQVLNMPNLNADQRNGFIQSLKDD-------------------PSQSAN 38 usage_03421.pdb 1 ----SKELRGLLKEIFI-TN--ELSRLENLVTNTK-----------------DDV-LISS 35 a nl qr f s dd s usage_00126.pdb 39 ILAEAKKLNDAQA----------- 51 usage_00127.pdb 38 ILAEAKKLNDAQA----------- 50 usage_00128.pdb 38 ILAEAKKLNDAQA----------- 50 usage_00165.pdb 36 LLAEAKKLNDAQ------------ 47 usage_00170.pdb 38 VLGEAKKLNESQA----------- 50 usage_00172.pdb 38 VLGEAKKLNESQA----------- 50 usage_00368.pdb 36 VLGEAKKLNESQA----------- 48 usage_00544.pdb 39 LLAEAKKLNDAQA----------- 51 usage_01014.pdb 42 LLAEAKKLNDAQA----------- 54 usage_01034.pdb 38 ILAEAKKLNDAQA----------- 50 usage_01035.pdb 42 ILAEAKKLNDAQ------------ 53 usage_01036.pdb 38 ILAEAKKLNDAQA----------- 50 usage_01037.pdb 38 ILAEAKKLNDAQ------------ 49 usage_01038.pdb 38 ILAEAKKLNDAQA----------- 50 usage_01670.pdb 55 LLAEAKKLNDA------------- 65 usage_01677.pdb 38 LLAEAKKLNDAQ------------ 49 usage_01708.pdb 39 LLAEAKKLNDAQA----------- 51 usage_02227.pdb 37 VLAEAQKLNDVQA----------- 49 usage_02365.pdb 37 LLACAKAANDAQSLCAAKSELDKA 60 usage_02932.pdb 40 LLAEAKKLNDAQA----------- 52 usage_03158.pdb 39 LLAEAKKLNDAQA----------- 51 usage_03159.pdb 39 VLGEAQKLNDSQA----------- 51 usage_03421.pdb 36 FDQLKEFSE--------------- 44 l a n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################