################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:47 2021 # Report_file: c_0643_37.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00061.pdb # 2: usage_00062.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00212.pdb # 7: usage_00214.pdb # 8: usage_00215.pdb # 9: usage_00617.pdb # # Length: 79 # Identity: 37/ 79 ( 46.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 79 ( 49.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 79 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 HVQYLPSIRQRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 54 usage_00062.pdb 1 HVQYLPSIRQRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 54 usage_00063.pdb 1 HVQYLPSIRQRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 54 usage_00064.pdb 1 HVQYLPSIRQRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 54 usage_00065.pdb 1 HVQYLPSIRQRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 54 usage_00212.pdb 1 ---------QRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSD-D--SEYFS 48 usage_00214.pdb 1 ---------QRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT-TE--NSDDSEYFS 48 usage_00215.pdb 1 --------RQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSD-D--SEYFS 49 usage_00617.pdb 1 ---------QRFSCDVSGVDTESGATCKLKFGSWTHHSRELDLQMQ-EA---D--ISGYI 45 QRFSCDVSGVDTESGATC K GSWTHHSRE e d usage_00061.pdb 55 PYSRFELVGVTQKRSE--- 70 usage_00062.pdb 55 PYSRFELVGVTQKRSE--- 70 usage_00063.pdb 55 PYSRFELVGVTQKRSER-- 71 usage_00064.pdb 55 PYSRFELVGVTQKRSE--- 70 usage_00065.pdb 55 PYSRFELVGVTQKRSERF- 72 usage_00212.pdb 49 QYSRFEILDVTQK------ 61 usage_00214.pdb 49 QYSRFEILDVTQKKNSVTY 67 usage_00215.pdb 50 QYSRFEILDVTQK------ 62 usage_00617.pdb 46 PYSRFELVGVTQKRSER-- 62 YSRFE VTQK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################