################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:06 2021 # Report_file: c_1058_26.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00028.pdb # 2: usage_00067.pdb # 3: usage_00096.pdb # 4: usage_00174.pdb # 5: usage_00192.pdb # 6: usage_00223.pdb # 7: usage_00286.pdb # 8: usage_00309.pdb # 9: usage_00339.pdb # 10: usage_00366.pdb # # Length: 53 # Identity: 1/ 53 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 53 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 53 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --TSLSKILRCGN-NTDTLTLIADN--TPDSIILLFEDTKKDRIAGYSLKLMD 48 usage_00067.pdb 1 DLTSLSKILRCGN-NTDTLTLIADN--TPDSIILLFEDTKKDRIAEYSLK--- 47 usage_00096.pdb 1 --DHFKKILKRGK-SKDTLILRKGD--EN---FLEITFEG-TAKRTFRLPLID 44 usage_00174.pdb 1 --TSMSKILKCAG-NEDIITLRAED--NADTLALVFEAPNQEKVSDYE----- 43 usage_00192.pdb 1 NLGNMSKMLKCAG-NDDIITIKADD--GSDTVTFMFESPTQDKIADFEMKLMD 50 usage_00223.pdb 1 --TSMSKILKCAG-NEDIITLRAED--NADTLALVFEAPNQEKVSDYEMKLMD 48 usage_00286.pdb 1 DLTSLSKILRCGN-NTDTLTLIADN--TPDSIILLFEDTKKDRIAEYSLKLMD 50 usage_00309.pdb 1 NLTSMSKILKCAG-NEDIITLRAED--NADTLALVFEAPNQEKVSDYEMKLMD 50 usage_00339.pdb 1 --TSMSKILKCAG-NEDIITLRAED--NADTLALVFEAPNQEKVSDYEMKLMD 48 usage_00366.pdb 1 -LKNFYQTLLNCAVTKLPCTLRIVTEHDT---LLYVASRNGLFAVENFLT--- 46 k L d tl l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################