################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:18 2021 # Report_file: c_0642_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00016.pdb # 2: usage_00044.pdb # 3: usage_00047.pdb # 4: usage_00050.pdb # 5: usage_00053.pdb # 6: usage_00059.pdb # 7: usage_00115.pdb # 8: usage_00120.pdb # 9: usage_00131.pdb # # Length: 125 # Identity: 15/125 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/125 ( 40.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/125 ( 39.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -LLSMSQDKYASHVIEGAFL-FA---------PPALLHEMMEEIFS--VKDVES--NRDA 45 usage_00044.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYI--PHPDTGKDA 48 usage_00047.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 48 usage_00050.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 48 usage_00053.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 48 usage_00059.pdb 1 -LLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 47 usage_00115.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 48 usage_00120.pdb 1 NLLSLSQEKFASHVVEKAFL-HA---------PLELLAEMMDEIFDGYIPHPDT--GKDA 48 usage_00131.pdb 1 VFFGLSCHKYASHVLETLFVRS-AALVEREVTMENMFLFMLNELK-------------PH 46 llslSq K ASHV E aFl p ll eMm Eif da usage_00016.pdb 46 LDILLFHQYGNYVVQQMISICTAALI----------ELPPAI---LLLYSGWYEKMKQRV 92 usage_00044.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00047.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00050.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00053.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00059.pdb 48 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 100 usage_00115.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00120.pdb 49 LDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGY----DH---AISFQDWLKKLHSRV 101 usage_00131.pdb 47 LKTMMNHQYASHVLRLLILILSS-------------------KTLPESFKSELRDIITTL 87 LdimmfHQ gnyVvq m Ic sf wl k rv usage_00016.pdb 93 LQH-- 95 usage_00044.pdb 102 TKE-- 104 usage_00047.pdb 102 TKE-- 104 usage_00050.pdb 102 TKE-- 104 usage_00053.pdb 102 TKE-- 104 usage_00059.pdb 101 TKE-- 103 usage_00115.pdb 102 TKE-- 104 usage_00120.pdb 102 TKE-- 104 usage_00131.pdb 88 YKGFT 92 k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################