################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:50 2021 # Report_file: c_1240_56.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00831.pdb # 2: usage_00861.pdb # 3: usage_00862.pdb # 4: usage_00863.pdb # 5: usage_00875.pdb # 6: usage_00933.pdb # 7: usage_01486.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 66 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 66 ( 65.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00831.pdb 1 -LM-VVGVI-NTDGTM--------TQEDISDYVAANMKDAISRTSGV-----G-D-VQLF 42 usage_00861.pdb 1 ----MIIGV-DPE--N-----TVEQAHEIC----EAVQAAVCGKIRR-----I-ESLHVS 38 usage_00862.pdb 1 ----MIIGV-DPE--N-----TVEQAHEIC----EAVQAAVGKIRRI-----E-S-LHVS 37 usage_00863.pdb 1 ----MIIGV-DPE--N-----TVEQAHEIC----EAVQAAVGKIRRI-----E-S-LAVS 37 usage_00875.pdb 1 ----MIIGV-DPE--N-----TREQAHEIC----EAVQAAVCGKIRR-----I-E--SLH 36 usage_00933.pdb 1 RT--VKIAI-AG----KPD-AYLSLLEALR----HAGIKN--------------R-ARVE 33 usage_01486.pdb 1 ---PNLVIDQTKA--V---QYLHEIKDSVV----AAFQWATKEG---PIFGEEMR-SVRV 44 a a usage_00831.pdb ------ usage_00861.pdb 39 AEA--- 41 usage_00862.pdb 38 AEA--- 40 usage_00863.pdb 38 AEA--- 40 usage_00875.pdb 37 VSA--- 39 usage_00933.pdb 34 VKWVDA 39 usage_01486.pdb 45 NI---- 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################