################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:32 2021 # Report_file: c_1276_73.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00386.pdb # 2: usage_00556.pdb # 3: usage_00785.pdb # 4: usage_01329.pdb # 5: usage_01345.pdb # # Length: 39 # Identity: 1/ 39 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 39 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 39 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00386.pdb 1 -GFTNMVERTTP--GSKDLSSKEFR--EGGRILVQKLQK 34 usage_00556.pdb 1 DAILLGA---VGGPKWDHNPASLR-P-EKGLLGLRKEMG 34 usage_00785.pdb 1 EAVLLGS---VGGPKWDGLPRKIR-P-ETGLLSLRKSQD 34 usage_01329.pdb 1 DAVLFGS---VGGPKWEHLPPNDQ-P-ERGALLPLRGHF 34 usage_01345.pdb 1 DAIFLGS---VGGPKWDDLPPEKR-PEIGGLLALRKMLN 35 a g vg kw lp e G l k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################