################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:08 2021 # Report_file: c_1180_233.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00040.pdb # 4: usage_00593.pdb # 5: usage_00890.pdb # 6: usage_01260.pdb # 7: usage_01487.pdb # 8: usage_01548.pdb # 9: usage_01549.pdb # 10: usage_01550.pdb # 11: usage_01804.pdb # # Length: 44 # Identity: 5/ 44 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 44 ( 13.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 44 ( 54.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -----DITMK-HKLGGGQYGEVYEGVWK---KYSLTVAV----- 30 usage_00012.pdb 1 -----WFLDF-RVLGRGGFGEVFACQMK---ATGKLYACKKLN- 34 usage_00040.pdb 1 -----LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 39 usage_00593.pdb 1 -----RYKGQ-RVLGKGSFGEVILCKDK---ITGQECAVKVIS- 34 usage_00890.pdb 1 -----RLRFK-EKLGEGQFGEVHLCEVD---SHPLLVAVKIL-- 33 usage_01260.pdb 1 -----RYKGQ-RVLGKGSFGEVILCKDK---ITGQECAVKVIS- 34 usage_01487.pdb 1 ------ITLI-RGLGHGAFGEVYEGQVS----SPLQVAVKTLP- 32 usage_01548.pdb 1 HWATH---------GRGSFGEVHRMEDK---QTGFQCAVKKVR- 31 usage_01549.pdb 1 -----WMTHQ-PRVGRGSFGEVHRMKDK---QTGFQCAVKKVR- 34 usage_01550.pdb 1 -----WMTHQ-PRLGRGSFGEVHRMKDK---QTGFQCAVKKVR- 34 usage_01804.pdb 1 -----ELETE-RIIGRG-FGTVKLVHHK---PTQIRYALKCVS- 33 G G fG V A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################