################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:28 2021 # Report_file: c_1492_117.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00279.pdb # 2: usage_01478.pdb # 3: usage_01770.pdb # 4: usage_02267.pdb # 5: usage_02387.pdb # 6: usage_02388.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 52 ( 9.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 52 ( 63.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00279.pdb 1 AAAAL-----------RDQLTALLSSMFSQGLV---DEQFQQLQMLQ----- 33 usage_01478.pdb 1 --AAL-----------RDQLTALLSSMFSQGLV---DEQFQQLQMLQD---- 32 usage_01770.pdb 1 ----S-----------LRDNA-LLSLLEENKLLPDEQYTLLNTLSQQAFGE- 35 usage_02267.pdb 1 -----VYYPILSHMQKTPLVQDKYA------GL---Q--LVHTEKAHS---Q 33 usage_02387.pdb 1 ---AL-----------REQLNALLSSMFASGLV---DEQFQQLQMLQEDGG- 34 usage_02388.pdb 1 ----L-----------REQLNALLSSMFASGLV---DEQFQQLQMLQEDGG- 33 lls l q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################