################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:21:55 2021 # Report_file: c_0129_13.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00017.pdb # 8: usage_00184.pdb # 9: usage_00255.pdb # 10: usage_00256.pdb # # Length: 190 # Identity: 15/190 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/190 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/190 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPADL 56 usage_00004.pdb 1 -KALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-----ERIFVFPANL 54 usage_00005.pdb 1 RKALVTGATGGLGEAIARALHAQGAIVGLHGTR-E-LKELAAELG-----ERIFVFPANL 53 usage_00006.pdb 1 RKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-----ERIFVFPANL 55 usage_00007.pdb 1 -KALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-----ERIFVFPANL 54 usage_00008.pdb 1 -KALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-----ERIFVFPANL 54 usage_00017.pdb 1 -GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSG-----------HRYVVCDL 48 usage_00184.pdb 1 -VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV 59 usage_00255.pdb 1 -KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-----KDVFVFSANL 54 usage_00256.pdb 1 -KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-----KDVFVFSANL 54 alVtg G G a a GA V l l usage_00003.pdb 57 SSEAGARRLAQALGELSARLDILVNNAGTS----------PVSGWEKVMQLNVTSVFSCI 106 usage_00004.pdb 55 SDREAVKALGQKAEEEMGGVDILVNNAGITRDG--LFVRMSDEDWDAVLTVNLTSVFNLT 112 usage_00005.pdb 54 SDREAVKALGQKAEEEMGGVDILVNNAGITRDG--LFVRMSDEDWDAVLTVNLTSVFNLT 111 usage_00006.pdb 56 SDREAVKALGQKAEEEMGGVDILVNNAGITRDG--LFVRMSDEDWDAVLTVNLTSVFNLT 113 usage_00007.pdb 55 SDREAVKALGQKAEEEMGGVDILVNNAGITRDG--LFVRMSDEDWDAVLTVNLTSVFNLT 112 usage_00008.pdb 55 SDREAVKALGQKAEEEMGGVDILVNNAGITRDG--LFVRMSDEDWDAVLTVNLTSVFNLT 112 usage_00017.pdb 49 R--KDLDLLFEKVK----EVDILVLNAGGPKAG--FFDELTNEDFKEAIDSLFLNMIKIV 100 usage_00184.pdb 60 LDALQVRAFAEACERTLGCASILVNNAGQGRVS--TFAETTDEAWSEELQLKFFSVIHPV 117 usage_00255.pdb 55 SDRKSIKQLAEVAEREMEGIDILVNNAG-----VRM----QDQDWDDVLAVNLTAASTLT 105 usage_00256.pdb 55 SDRKSIKQLAEVAEREMEGIDILVNN--------------QDQDWDDVLAVNLTAASTLT 100 l dILVnN w usage_00003.pdb 107 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEH 166 usage_00004.pdb 113 RELTHPMMRRR----NGRIINITSIVGVTG-NPGQANYCASKAGLIGFSKSLAQEIASRN 167 usage_00005.pdb 112 RELTHPMMRRR----NGRIINITSIVGVTG-NPGQANYCASKAGLIGFSKSLAQEIASRN 166 usage_00006.pdb 114 RELTHPMMRRR----NGRIINITSIVGVTG-NPGQANYCASKAGLIGFSKSLAQEIASRN 168 usage_00007.pdb 113 RELTHPMMRRR----NGRIINITSIVGVTG-NPGQANYCASKAGLIGFSKSLAQEIASRN 167 usage_00008.pdb 113 RELTHPMMRRR----NGRIINITSIVGVTG-NPGQANYCASKAGLIGFSKSLAQEIASRN 167 usage_00017.pdb 101 RNYLPAMKEKG----WGRIVAITSFSVISP-IENLYTSNSARMALTGFLKTLSFEVAPYG 155 usage_00184.pdb 118 RAFLPQLESRA----DAAIVCVNSLLASQP-EPHMVATSAARAGVKNLVRSMAFEFAPKG 172 usage_00255.pdb 106 RELIHSMMRRR----YGRIINITSI--------GQTNYCAAKAGLIGFSKALAQEIASRN 153 usage_00256.pdb 101 RELIHSMMRRR----YGRIINITSI---------QTNYCAAKAGLIGFSKALAQEIASRN 147 r ri i S a l la E a usage_00003.pdb 167 INVNVIAPG- 175 usage_00004.pdb 168 VTVNCIAPG- 176 usage_00005.pdb 167 VTVNCIAPG- 175 usage_00006.pdb 169 VTVNCIAPG- 177 usage_00007.pdb 168 VTVNCIAPG- 176 usage_00008.pdb 168 VTVNCIAPG- 176 usage_00017.pdb 156 ITVNCVAPG- 164 usage_00184.pdb 173 VRVNGILIG- 181 usage_00255.pdb 154 ITVNCIAPGF 163 usage_00256.pdb 148 ITVNCIAPGF 157 VN iapG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################