################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:15 2021 # Report_file: c_1396_168.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00374.pdb # 2: usage_01214.pdb # 3: usage_01215.pdb # 4: usage_01216.pdb # 5: usage_01217.pdb # 6: usage_01218.pdb # 7: usage_01219.pdb # 8: usage_01220.pdb # 9: usage_01221.pdb # 10: usage_01405.pdb # 11: usage_01406.pdb # 12: usage_01407.pdb # 13: usage_01408.pdb # 14: usage_01409.pdb # 15: usage_01410.pdb # 16: usage_01411.pdb # # Length: 58 # Identity: 34/ 58 ( 58.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 58 ( 84.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 58 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00374.pdb 1 HPIIKELRRRVGAD-NDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLS 57 usage_01214.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGL- 57 usage_01215.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 58 usage_01216.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 58 usage_01217.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGL- 57 usage_01218.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 58 usage_01219.pdb 1 --IVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 56 usage_01220.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 58 usage_01221.pdb 1 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 58 usage_01405.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01406.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01407.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01408.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01409.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01410.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 usage_01411.pdb 1 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL- 57 I etLRqkaeAD NDK VKDLV LL eTaLLsSGFsLEDPqth nRIyRMIKLGL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################