################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:17 2021 # Report_file: c_1486_122.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00169.pdb # 3: usage_00245.pdb # 4: usage_00246.pdb # 5: usage_00313.pdb # 6: usage_01082.pdb # 7: usage_01085.pdb # 8: usage_01167.pdb # 9: usage_01940.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 34 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 34 ( 76.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 PAFQKSLAKVRE-ELND--------KNNL----- 20 usage_00169.pdb 1 F--EFEQMFTDA-LGID--------E-----Y-- 16 usage_00245.pdb 1 ---PRFQELESE-TLKS--------EEFQ-KRL- 20 usage_00246.pdb 1 ---PRFQELESE-TLKS--------EEFQ-KRL- 20 usage_00313.pdb 1 -----PSVVFDD-IVTN--------EQIQ-KRA- 18 usage_01082.pdb 1 ------DRKELEEDF-I--------KSEL-KKAG 18 usage_01085.pdb 1 --------VDPF-YEMLAARKKRISVKK-KQ--- 21 usage_01167.pdb 1 ----SKKLSENI-LKQQ--------SDER-VF-- 18 usage_01940.pdb 1 C--PRFQELESE-TLKS--------EEFQ-KRL- 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################