################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:50:21 2021 # Report_file: c_0277_19.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00007.pdb # 2: usage_00010.pdb # 3: usage_00031.pdb # 4: usage_00077.pdb # 5: usage_00088.pdb # 6: usage_00089.pdb # 7: usage_00103.pdb # 8: usage_00113.pdb # 9: usage_00140.pdb # 10: usage_00144.pdb # 11: usage_00152.pdb # 12: usage_00154.pdb # 13: usage_00156.pdb # 14: usage_00163.pdb # 15: usage_00175.pdb # 16: usage_00212.pdb # 17: usage_00246.pdb # # Length: 106 # Identity: 29/106 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/106 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/106 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ---QVESGGGLVQAGGSLRLSCAAS-GYAY-TY-I-YGWFRQAPGKEREGVAAD-SGGGG 52 usage_00010.pdb 1 QVQLQESGGGLVQAGGSLRLSCAAS-GSIF-SI-NSMDWDRQAPGKQRELVATITS-GGS 56 usage_00031.pdb 1 --QLQESGGGSVQAGGSLRLSCGAS-EY----T-SRMGWFRQAPGAEREGVACIHRQSNL 52 usage_00077.pdb 1 --QLQESGGGLVQPGGSLRLSCAAS-GSIS-SI-TTMGWYRQD--G-RELVALINS-VGD 51 usage_00088.pdb 1 --QLQASGGGSVQAGGSLRLSCAAS-GYTI-GP-YCMGWFRQAPGKEREGVAAINMGGGI 55 usage_00089.pdb 1 --QLQASGGGSVQAGGSLRLSCAAS-GYTI-GP-YCMGWFRQAPGKEREGVAAINMGGGI 55 usage_00103.pdb 1 -VQLQESGGGLVQPGGSLRLSCVVS-GD----Y-YAIGWFRQAPGKEREGVAAISSRDGS 53 usage_00113.pdb 1 --QLQASGGGSVQAGGSLRLSCAAS-GYTI-GP-YCMGWFRQAPGKEREGVAAINSGGGS 55 usage_00140.pdb 1 --QLVESGGGSVQAGGSLRLSCAVSGTY----SPCTTGWYRQAPGKEREWVSSIS-SPGT 53 usage_00144.pdb 1 --QLVESGGGLVQA-GSLRLSCAAS-GYPH-PY-LHMGWFRQAPGKEREGVAAMDSGGGG 54 usage_00152.pdb 1 --QLVESGGGSVQAGGSLRLSCTAS-GYTI-GP-YCMGWFRQAPGGEREAVAAINMGGGI 55 usage_00154.pdb 1 --QLVESGGGLVQAGGSLRLSCAAS-GRS-FSR-DAMGWFRQAPGKERDVVAAINLNGGR 55 usage_00156.pdb 1 --QLQESGGGLVQAGGSLRLSCAAS-ERT-FST-YAMGWFRQAPGREREFLAQINWSGTT 55 usage_00163.pdb 1 QVQLQESGGGLVQPGGSLRLSCAAS-GSIY-SL-IAMGWYRQAPGKEHELVATISS-GST 56 usage_00175.pdb 1 --QLQESGGGSVQAGGSLRLSCGAS-EY----T-SRMGWFRQAPGAEREGVACIHRQSNL 52 usage_00212.pdb 1 --QLQESGGGLVQAGGSLRLSCEAS-GRT-FSS-YAMGWFRQAP--ERDFVAVISWSGSN 53 usage_00246.pdb 1 --QLVESGGGLAQAGGSLRLSCAAS-GRT-FSM-DPMAWFRQPPGKEREFVAAGSSTGRT 55 l SGGG vQ GSLRLSC S W RQ r va usage_00007.pdb 53 TLYADSVKGR-TISRDKGKNTVYLQ-DSLKPEDTATYYCAAG---- 92 usage_00010.pdb 57 TNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANVK-- 100 usage_00031.pdb 53 SYYSDSVRGRFTISQDNAKTTAFLLMSSLKPEDTAIYYCA------ 92 usage_00077.pdb 52 TTYAGSVKGRFTISRDNAKNTVYLEMSSLKPEDTAVYYCNAFMSTN 97 usage_00088.pdb 56 TYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST-- 99 usage_00089.pdb 56 TYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST-- 99 usage_00103.pdb 54 TYYPDAVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADR--- 96 usage_00113.pdb 56 TYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST-- 99 usage_00140.pdb 54 IYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQC--- 96 usage_00144.pdb 55 TLYADSVKGRFTISRDKGKNTVYLQMDSLKPEDTATYYCAAG---- 96 usage_00152.pdb 56 TYYADSVKGRFTISRDNAKNTVTLQMNSLKPEDTAMYYCAADST-- 99 usage_00154.pdb 56 TYSADSVKGRFTISRDNDKNTVYLQMSNLKPEDTAVYYCAARE--- 98 usage_00156.pdb 56 TYYAESVKDRTTISRDNAKNTVYLEMNNLNADDTGIYFCAAH---- 97 usage_00163.pdb 57 TYYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAMYYCAAYSD-- 100 usage_00175.pdb 53 SYYSDSVRGRFTISQDNAKTTAFLLMSSLKPEDTAIYYCA------ 92 usage_00212.pdb 54 TYYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAAPGR-- 97 usage_00246.pdb 56 TYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAA---- 97 y sv gR TIS D K T L L eDT YyC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################