################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:06 2021 # Report_file: c_0753_62.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00035.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00415.pdb # 9: usage_00476.pdb # 10: usage_00477.pdb # # Length: 50 # Identity: 11/ 50 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 50 ( 48.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 50 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR-- 48 usage_00038.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSY-- 45 usage_00039.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLS--- 44 usage_00040.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDE 47 usage_00041.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSY-- 45 usage_00042.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSY-- 45 usage_00043.pdb 1 ---HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLS--- 44 usage_00415.pdb 1 ---DLCLVTHDLEASVEFYTTKLGYTLSSR-PGFADFEGPGVILALWD-- 44 usage_00476.pdb 1 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR-- 48 usage_00477.pdb 1 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLC----- 45 hLtLav DL S F lLG L aR gAyl g lw c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################