################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:02 2021 # Report_file: c_1277_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00297.pdb # 2: usage_00336.pdb # 3: usage_00337.pdb # 4: usage_00354.pdb # 5: usage_00355.pdb # 6: usage_00562.pdb # 7: usage_00563.pdb # 8: usage_00564.pdb # 9: usage_00565.pdb # 10: usage_00732.pdb # 11: usage_00905.pdb # # Length: 66 # Identity: 2/ 66 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 66 ( 10.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 66 ( 65.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00297.pdb 1 --DVIILLD---SITRLARAYNTVVPASGKVLTGGVDAN--------ALHRPKRFFGA-- 45 usage_00336.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00337.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00354.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00355.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00562.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00563.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00564.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQV 40 usage_00565.pdb 1 DLKVFVDADADERFIRRLKRDVLER--------------GR------SLEGVVAQYLEQ- 39 usage_00732.pdb 1 DVKIYLTASAQARAQRRN------------------------------LADVQRRDHLDS 30 usage_00905.pdb 1 DVKIFLTASAEERARRRNAQNVANG---------------LPDDYATVLADVQRRDHLDS 45 k a r Rr L v usage_00297.pdb ------ usage_00336.pdb 41 KPMHLH 46 usage_00337.pdb 41 KPMHLH 46 usage_00354.pdb 41 KPMHLH 46 usage_00355.pdb 41 KPMHLH 46 usage_00562.pdb 41 KPMHL- 45 usage_00563.pdb 41 KPMHLH 46 usage_00564.pdb 41 KPMHLH 46 usage_00565.pdb ------ usage_00732.pdb 31 T----- 31 usage_00905.pdb 46 T----- 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################