################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:35 2021 # Report_file: c_0886_4.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00078.pdb # 2: usage_00079.pdb # 3: usage_00137.pdb # 4: usage_00308.pdb # 5: usage_00361.pdb # 6: usage_00404.pdb # 7: usage_00423.pdb # 8: usage_00431.pdb # 9: usage_00432.pdb # 10: usage_00433.pdb # 11: usage_00434.pdb # 12: usage_00548.pdb # 13: usage_00587.pdb # 14: usage_00588.pdb # 15: usage_00589.pdb # 16: usage_00597.pdb # 17: usage_00631.pdb # # Length: 120 # Identity: 40/120 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/120 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/120 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 EVAFNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 60 usage_00079.pdb 1 -VAFNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00137.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV------QLVEGVQEQVNAA 53 usage_00308.pdb 1 ------LGDYFNELQNKLQDLKFDG-DYV-CKFLILLNPSVRGIVNRKTVSEGHDNVQAA 52 usage_00361.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00404.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00423.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00431.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00432.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV-KLENFQLVEGVQEQVNAA 58 usage_00433.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00434.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00548.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00587.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00588.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00589.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00597.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 usage_00631.pdb 1 -ATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAA 59 LmshaqELvaKLrsLqFDq efV lKFLvLfsldV qlVegvqeqVnAA usage_00078.pdb 61 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVP---LLIE--MLHA 115 usage_00079.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVP---LLIE--MLHA 114 usage_00137.pdb 54 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 111 usage_00308.pdb 53 LLDYTLTCYPSVNDKFRGLVNILPEIHA-AVRGEDHLYTKHCAGSAPTQTLLELHA---- 107 usage_00361.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00404.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLH- 116 usage_00423.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00431.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00432.pdb 59 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 116 usage_00433.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLH- 116 usage_00434.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00548.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00587.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00588.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00589.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00597.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIE--MLHA 117 usage_00631.pdb 60 LLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPNLLIEML--HA-- 115 LLDYTmcnYPqqteKFgqLllrLPEIrA smqaEeyLYyKHlnGdvP ll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################