################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:28 2021 # Report_file: c_1452_224.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00335.pdb # 2: usage_00926.pdb # 3: usage_01366.pdb # 4: usage_01665.pdb # 5: usage_01666.pdb # 6: usage_01669.pdb # 7: usage_02235.pdb # 8: usage_02263.pdb # 9: usage_02962.pdb # 10: usage_02963.pdb # 11: usage_03631.pdb # 12: usage_05035.pdb # 13: usage_05180.pdb # 14: usage_05494.pdb # # Length: 22 # Identity: 0/ 22 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 22 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 22 ( 72.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00335.pdb 1 -YKYIQEDEKTVE--------- 12 usage_00926.pdb 1 -RIKLHQEDNDYI---N----- 13 usage_01366.pdb 1 ---LKMHENAAWLD-------- 11 usage_01665.pdb 1 -RIKLHQEDNDYI---N----- 13 usage_01666.pdb 1 -RIKLHQEDNDYI---N----- 13 usage_01669.pdb 1 -RIKLHQEDNDYI---N----- 13 usage_02235.pdb 1 ---LKMHENAAWLD-------- 11 usage_02263.pdb 1 ---HIKFRDVEDMLLE------ 13 usage_02962.pdb 1 --RVPLKHE--------SKYIN 12 usage_02963.pdb 1 --RVPLKHE--------SKYIN 12 usage_03631.pdb 1 --IACHHRKPNYV---D----- 12 usage_05035.pdb 1 EVKVTKKDHL-YVG-------- 13 usage_05180.pdb 1 -RIKLHQEDNDYI---N----- 13 usage_05494.pdb 1 I--ACHHRKPNYV---D----- 12 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################