################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:22 2021 # Report_file: c_1484_92.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01915.pdb # 2: usage_01916.pdb # 3: usage_02135.pdb # 4: usage_02136.pdb # 5: usage_02137.pdb # 6: usage_02138.pdb # # Length: 90 # Identity: 37/ 90 ( 41.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 90 ( 41.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 90 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01915.pdb 1 NQKLIANKFNQALGAMQTGFTTTNEAFQKVQDAVNNNAQALSKLASEQ------------ 48 usage_01916.pdb 1 -QKLIANKFNQALGAMQTGFTTTNEAFQKVQDAVNNNAQALSKLASEQ------------ 47 usage_02135.pdb 1 -QKMIASAFNNALGAIQDGFDATNSALGKIQSVVNANAEALNNLLNQ-LSNRFGAIDLSL 58 usage_02136.pdb 1 NQKMIASAFNNALGAIQDGFDATNSALGKIQSVVNANAEALNNLLNQ-LSN-RFGADLSL 58 usage_02137.pdb 1 --KMIASAFNNALGAIQDGFDATNSALGKIQSVVNANAEALNNLLNQ-LSL--------- 48 usage_02138.pdb 1 -QKMIASAFNNALGAIQDGFDATNSALGKIQSVVNANAEALNNLLNQ-LS---------- 48 K IA FN ALGA Q GF TN A K Q VN NA AL L usage_01915.pdb 49 ----INTTLLDLTYEMLSLQQVVKALNESY 74 usage_01916.pdb 48 ----INTTLLDLTYEMLSLQQVVKALNES- 72 usage_02135.pdb 59 DFEKLNVTLLDLTYEMNRIQDAIKKLNESY 88 usage_02136.pdb 59 DFEKLNVTLLDLTYEMNRIQDAIKKLNESY 88 usage_02137.pdb 49 ----LNVTLLDLTYEMNRIQDAIKKLNESY 74 usage_02138.pdb 49 ---------LDLTYEMNRIQDAIKKLNESY 69 LDLTYEM Q K LNES #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################