################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:14 2021 # Report_file: c_0367_24.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00266.pdb # 2: usage_00267.pdb # 3: usage_00325.pdb # 4: usage_00326.pdb # 5: usage_00327.pdb # 6: usage_00328.pdb # 7: usage_00329.pdb # # Length: 99 # Identity: 59/ 99 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 99 ( 60.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 99 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00266.pdb 1 --TQREQEIIRLTQQLITSITAKDFDSYSKLVDPKITAFEPEALGNQVEGLEFHKFYFDN 58 usage_00267.pdb 1 --TQREQEIIRLTQQLITSITAKDFDSYSKLVDPKITAFEPEALGNQVEGLEFHKFYFDN 58 usage_00325.pdb 1 -AKVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFHKFYFDN 59 usage_00326.pdb 1 --KVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFHKFYFDN 58 usage_00327.pdb 1 TAKVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFHKFYFDN 60 usage_00328.pdb 1 -AKVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFHKFYFDN 59 usage_00329.pdb 1 -AKVREQEIIRLTQKLITSITTGDYDTYSKLVDPHVTCFEPFSNGNLVEGLEFHKFYFDN 59 REQEIIRLTQ LITSIT D D YSKLVDP T FEP GN VEGLEFHKFYFDN usage_00266.pdb 59 L--P--TTVNTTILAPHVQMLGEEGACISY--------- 84 usage_00267.pdb 59 LPNKRNTTVNTTILAPHVQMLGEEGACISY--------- 88 usage_00325.pdb 60 TLSK--VPINTTILSPHVHVLGEDAACICYMRLTQSVNS 96 usage_00326.pdb 59 TLSKRSVPINTTILSPHVHVLGEDAACICY--------- 88 usage_00327.pdb 61 TLSK--VPINTTILSPHVHVLGEDAACICY--------- 88 usage_00328.pdb 60 TLSKRSVPINTTILSPHVHVLGEDAACICY--------- 89 usage_00329.pdb 60 TLSKRSVPINTTILSPHVHVLGEDAACICY--------- 89 k NTTIL PHV LGE ACI Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################