################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:31 2021 # Report_file: c_0545_62.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00838.pdb # 9: usage_00900.pdb # 10: usage_00901.pdb # 11: usage_00902.pdb # 12: usage_00903.pdb # # Length: 171 # Identity: 93/171 ( 54.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/171 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 78/171 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -ITSDLKHLYDKRTTFFGIDCEIVSNLLNVLPYEEVSSIIKP-YPIVDSFGKDYDLTIQT 58 usage_00016.pdb 1 -ITSDLKHLYDKRTTFFGIDCEIVSNLLNVLPYEEVSSIIKP-YPIVDSFGKDYDLTIQT 58 usage_00021.pdb 1 ----------------------------------------K-PYPIVDSFGKDYDLTIQT 19 usage_00022.pdb 1 ------------------------------------SSIIK-PYPIVDSFGKDYDLTIQT 23 usage_00023.pdb 1 TITSDLKHLYDKRTTFFGIDYEIVSNLLNVLPYEEVSSIIKP-YPIVDSFGKDYDLTIQT 59 usage_00024.pdb 1 -----------------GIDYEIVSNLLNVLPYEEVSSIIKP-YPIVDSFGKDYDLTIQT 42 usage_00025.pdb 1 -----------------GIDCEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 43 usage_00838.pdb 1 ------------------IDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 42 usage_00900.pdb 1 -----------------GIDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 43 usage_00901.pdb 1 -----------------GIDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 43 usage_00902.pdb 1 -----------------GIDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 43 usage_00903.pdb 1 -----------------GIDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGKDYDLTIQT 43 K YPIVDSFGKDYDLTIQT usage_00015.pdb 59 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 117 usage_00016.pdb 59 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 117 usage_00021.pdb 20 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 78 usage_00022.pdb 24 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 82 usage_00023.pdb 60 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 118 usage_00024.pdb 43 VLKNALTISI-NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 101 usage_00025.pdb 44 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 103 usage_00838.pdb 43 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 102 usage_00900.pdb 44 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 103 usage_00901.pdb 44 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 103 usage_00902.pdb 44 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 103 usage_00903.pdb 44 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID 103 VLKNALTISI NRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNID usage_00015.pdb 118 SYLNAVNIINIFKIIG----------------------------------- 133 usage_00016.pdb 118 SYLNAVNIINIFKIIG----------------------------------- 133 usage_00021.pdb 79 SYLNAVNIINIFKIIGKEDIHRSLVEELTKISAKEKFTPPKEVTMYYE--- 126 usage_00022.pdb 83 SYLNAVNIINIFKIIGKEDIHRSLVEELTKISAKEKFTPPKEVTMYYENYV 133 usage_00023.pdb 119 SYLNAVNIINIFKIIG----------------------------------- 134 usage_00024.pdb 102 SYLNAVNIINIFKIIGKEDIHRSLVEELTKISAKEK--------------- 137 usage_00025.pdb 104 SYLNAVNIINIFKIIGKEDIHRSLVEELTKISAKEK--------------- 139 usage_00838.pdb 103 SYLNAVNIINIFKIIGKEDIHRSLVEELTKIS------------------- 134 usage_00900.pdb 104 SYLNAVNIINIFKIIGKEDIHRSLVEELTKIS------------------- 135 usage_00901.pdb 104 SYLNAVNIINIFKIIGKEDIHRSLVEELTKIS------------------- 135 usage_00902.pdb 104 SYLNAVNIINIFKIIGKEDIHRSLVEELTKIS------------------- 135 usage_00903.pdb 104 SYLNAVNIINIFKIIGKEDIHRSLVEELTKIS------------------- 135 SYLNAVNIINIFKIIG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################