################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:24 2021 # Report_file: c_1405_78.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00017.pdb # 2: usage_00046.pdb # 3: usage_00524.pdb # 4: usage_00545.pdb # 5: usage_00546.pdb # 6: usage_00547.pdb # 7: usage_00833.pdb # 8: usage_00941.pdb # 9: usage_01296.pdb # 10: usage_01437.pdb # 11: usage_01533.pdb # 12: usage_01534.pdb # 13: usage_01857.pdb # # Length: 53 # Identity: 39/ 53 ( 73.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 53 ( 73.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 53 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -KVADYCRDRLHFALAEEIERIKDE--TGEGRQVQWDKVFTSCFLTVDGEIEG 50 usage_00046.pdb 1 -KVADYCRDRLHFALAEEIERIKD-------RQVQWDKVFTSCFLTVDGEIEG 45 usage_00524.pdb 1 --VADYCRDRLHFALAEEIERIKDELC----RQVQWDKVFTSCFLTVDGEIEG 47 usage_00545.pdb 1 HKVADYCRDRLHFALAEEIERIKD-----EGRQVQWDKVFTSCFLTVDGEIEG 48 usage_00546.pdb 1 -KVADYCRDRLHFALAEEIERIKD--------QVQWDKVFTSCFLTVDGEIEG 44 usage_00547.pdb 1 HKVADYCRDRLHFALAEEIERIK--------RQVQWDKVFTSCFLTVDGEIEG 45 usage_00833.pdb 1 -KVADYCRDRLHFALAEEIERIK--------RQVQWDKVFTSCFLTVDGEIEG 44 usage_00941.pdb 1 -KVADYCRDRLHFALAEEIER----------RQVQWDKVFTSCFLTVDGEIEG 42 usage_01296.pdb 1 -KVADYCRDRLHFALAEEIERIK--------RQVQWDKVFTSCFLTVDGEIE- 43 usage_01437.pdb 1 -KVADYCRDRLHFALAEEIERIK-------GRQVQWDKVFTSCFLTVDGEIEG 45 usage_01533.pdb 1 -KVADYCRDRLHFALAEEIERIKD-------RQVQWDKVFTSCFLTVDGEIEG 45 usage_01534.pdb 1 -KVADYCRDRLHFALAEEIERIKD-------RQVQWDKVFTSCFLTVDGEIEG 45 usage_01857.pdb 1 -KVADYCRDRLHFALAEEIERIK---------QVQWDKVFTSCFLTVDGEIEG 43 VADYCRDRLHFALAEEIER QVQWDKVFTSCFLTVDGEIE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################