################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:03 2021 # Report_file: c_0164_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00026.pdb # 4: usage_00046.pdb # 5: usage_00068.pdb # 6: usage_00070.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # # Length: 161 # Identity: 39/161 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/161 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/161 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ---------KPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHT 51 usage_00003.pdb 1 ---------KPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHT 51 usage_00026.pdb 1 ---------KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYT 51 usage_00046.pdb 1 ---------KPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHT 51 usage_00068.pdb 1 ---------KPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKNHT 51 usage_00070.pdb 1 --------PKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYT 52 usage_00073.pdb 1 ETVVIQGK--PYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHT 58 usage_00074.pdb 1 ETVVIQGK--PYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHT 58 FDrV q vY a iv vl GyNGTIFAYGQT sGKt T usage_00002.pdb 52 MEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS-KTNL 110 usage_00003.pdb 52 MEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS-KTNL 110 usage_00026.pdb 52 MMGS--E-DHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGT-QKMK 106 usage_00046.pdb 52 MEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS-KTNL 110 usage_00068.pdb 52 MEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS-KTNL 110 usage_00070.pdb 53 MEGIRGDPEKRGVIPNSFDHIFTHISRS-QNQQYLVRASYLEIYQEEIRDLLSKDQTKRL 111 usage_00073.pdb 59 MEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFAIKVSYFEIYLDKIRDLLDVS-KTNL 117 usage_00074.pdb 59 MEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFAIKVSYFEIYLDKIRDLLDVS-KTNL 117 MeG d G IPr dIF I n ef vSY EIY IrDLL l usage_00002.pdb 111 SVHE-DKN-RVPYVKGCTERFVCSPDEVMDTIDEGKSNR-- 147 usage_00003.pdb 111 SVHE-DKN-RVPYVKGCTERFVCSPDEVMDTIDEGKSNR-- 147 usage_00026.pdb 107 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSR-- 145 usage_00046.pdb 111 SVHE-DKN-RVPYVKGATERFVSSPDEVMDTIDEGKSNR-- 147 usage_00068.pdb 111 SVHE-DKN-RVPYVKGCTERFVCSPDEVMDTIDEGKSNRHV 149 usage_00070.pdb 112 ELKE-RPD-TGVYVKDLSSFVTKSVKEIEHVMNVGNQNR-- 148 usage_00073.pdb 118 AVHE-DKN-RVPYVKGCTERFVSSPEEVMDVIDEGKSNR-- 154 usage_00074.pdb 118 AVHE-DKN-RVPYVKGCTERFVSSPEEVMDVIDEGKSNR-- 154 e r YVk te v s e i G nR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################