################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:28 2021 # Report_file: c_0004_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00097.pdb # # Length: 339 # Identity: 245/339 ( 72.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 245/339 ( 72.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 94/339 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 KVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKF 60 usage_00003.pdb 1 KVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKF 60 usage_00006.pdb 1 --------------------------------------EPTKVAEIKIGIEARSVESSKF 22 usage_00097.pdb 1 KVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKF 60 EPTKVAEIKIGIEARSVESSKF usage_00002.pdb 61 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 120 usage_00003.pdb 61 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 120 usage_00006.pdb 23 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 82 usage_00097.pdb 61 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 120 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP usage_00002.pdb 121 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 180 usage_00003.pdb 121 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 180 usage_00006.pdb 83 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 142 usage_00097.pdb 121 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 180 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID usage_00002.pdb 181 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 240 usage_00003.pdb 181 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 240 usage_00006.pdb 143 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 202 usage_00097.pdb 181 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 240 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK usage_00002.pdb 241 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD----------------- 283 usage_00003.pdb 241 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD----------------- 283 usage_00006.pdb 203 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA 262 usage_00097.pdb 241 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD----------------- 283 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD usage_00002.pdb --------------------------------------- usage_00003.pdb --------------------------------------- usage_00006.pdb 263 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 301 usage_00097.pdb --------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################