################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:35 2021 # Report_file: c_0920_9.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00085.pdb # 2: usage_00111.pdb # 3: usage_00161.pdb # 4: usage_00162.pdb # 5: usage_00167.pdb # 6: usage_00479.pdb # 7: usage_00480.pdb # 8: usage_00481.pdb # 9: usage_00611.pdb # 10: usage_00710.pdb # 11: usage_00711.pdb # 12: usage_00756.pdb # # Length: 41 # Identity: 2/ 41 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 41 ( 68.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 41 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00111.pdb 1 --GIKDIPYTFRGRKTVL-KGIHGLYCVH-----CEESIMN 33 usage_00161.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00162.pdb 1 ---YLSDCNVTSRPAKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00167.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00479.pdb 1 SEFYLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 40 usage_00480.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00481.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFSVTCENQAPVHFVG- 37 usage_00611.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVG- 37 usage_00710.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFAVTCENQAPVHFVG- 37 usage_00711.pdb 1 SEFYLSDCNVTSRPCKYKLKKSTNKFAVTCENQAPVHFVG- 40 usage_00756.pdb 1 ---YLSDCNVTSRPCKYKLKKSTNKFCVNCANQAPVHFVG- 37 ylsdcnvtsrp kyk Kkstnkf V pvhfvg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################