################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:53 2021 # Report_file: c_0047_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00032.pdb # 5: usage_00043.pdb # 6: usage_00103.pdb # 7: usage_00104.pdb # 8: usage_00105.pdb # 9: usage_00106.pdb # # Length: 250 # Identity: 112/250 ( 44.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 231/250 ( 92.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/250 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00030.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00031.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00032.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00043.pdb 1 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS 60 usage_00103.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00104.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00105.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 usage_00106.pdb 1 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 60 KVALvTGAGRGIGRemAmELGRRGckViVNYanStesAEEVVAaiKKnGsdaacvkAnvg usage_00029.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00030.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00031.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00032.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00043.pdb 61 KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 120 usage_00103.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00104.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00105.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 usage_00106.pdb 61 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 120 vvediVrmFeeAVkiFGkLDiVcSNSGvvsfghvkdVTpEeFDrVFtiNTRGQFFVArea usage_00029.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00030.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00031.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00032.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00043.pdb 121 LKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPG 180 usage_00103.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00104.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00105.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 usage_00106.pdb 121 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 180 yKHleiGGRlILmgSItgqakavPkHAvYsGSKgAiEtFaRcmAiDmadKkiTVNvvAPG usage_00029.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00030.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00031.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00032.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00043.pdb 181 GVKTDMFDENSWHYAPGGYKGMPQEK-IDEGLANMNPLKRIGYPADIGRAVSALCQEESE 239 usage_00103.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00104.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00105.pdb 181 GIKTDMYHAVCREYIPNGENLSNEEV-DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 239 usage_00106.pdb 181 GIKTDMYH------------------ADEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 222 GiKTDMyh deyaavqwsPLrRvGlPiDIaRvVcfLasndgg usage_00029.pdb 240 WVTGKVIGID 249 usage_00030.pdb 240 WVTGKVIGID 249 usage_00031.pdb 240 WVTGKVIGID 249 usage_00032.pdb 240 WVTGKVIGID 249 usage_00043.pdb 240 WINGQVIKLT 249 usage_00103.pdb 240 WVTGKVIGID 249 usage_00104.pdb 240 WVTGKVIGID 249 usage_00105.pdb 240 WVTGKVIGID 249 usage_00106.pdb 223 WVTGKVIGID 232 WvtGkVIgid #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################