################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:06 2021 # Report_file: c_0599_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00014.pdb # 3: usage_00016.pdb # 4: usage_00019.pdb # 5: usage_00023.pdb # 6: usage_00025.pdb # 7: usage_00036.pdb # 8: usage_00043.pdb # 9: usage_00049.pdb # # Length: 126 # Identity: 18/126 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/126 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/126 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00014.pdb 1 ------RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 54 usage_00016.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00019.pdb 1 ----PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 56 usage_00023.pdb 1 ------RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 54 usage_00025.pdb 1 -----LRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPP 55 usage_00036.pdb 1 ------------SEETSK--NQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPE 46 usage_00043.pdb 1 -----RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE 55 usage_00049.pdb 1 PPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGK 60 gik p I GP d P eGG f p usage_00005.pdb 56 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 103 usage_00014.pdb 55 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 102 usage_00016.pdb 56 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 103 usage_00019.pdb 57 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 104 usage_00023.pdb 55 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 102 usage_00025.pdb 56 DYPIHPPRVKLMTT-GNNTVRFNPNFY-RNGKVCLSILG-TWTGPAWSPAQSISSVLISI 112 usage_00036.pdb 47 TYPFNPPKVRFITKI------WHPNISSVTGAICLDILKD-----QWAAAMTLRTVLLSL 95 usage_00043.pdb 56 EYPMAAPKVRFMTKI------YHPNVD-KLGRICLDILKD-----KWSPALQIRTVLLSI 103 usage_00049.pdb 61 DFPASPPKGYFLTKI------FHPNVG-ANGEICVNVLKR-----DWTAELGIRHVLLTI 108 yP Pkv f Tk hPN G iCl iLk W a ir VLlsi usage_00005.pdb 104 QALLSA 109 usage_00014.pdb 103 QALLSA 108 usage_00016.pdb 104 QALLS- 108 usage_00019.pdb 105 QALLS- 109 usage_00023.pdb 103 QALLS- 107 usage_00025.pdb 113 QSL--- 115 usage_00036.pdb 96 QALLAA 101 usage_00043.pdb 104 QALLS- 108 usage_00049.pdb 109 KCLLIH 114 q L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################