################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:22:28 2021 # Report_file: c_0327_6.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00008.pdb # 8: usage_00009.pdb # 9: usage_00010.pdb # 10: usage_00022.pdb # 11: usage_00023.pdb # 12: usage_00039.pdb # 13: usage_00040.pdb # 14: usage_00041.pdb # 15: usage_00042.pdb # 16: usage_00047.pdb # 17: usage_00070.pdb # 18: usage_00072.pdb # 19: usage_00073.pdb # 20: usage_00078.pdb # # Length: 123 # Identity: 60/123 ( 48.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/123 ( 68.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/123 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGWILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00003.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00004.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00005.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00006.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00007.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00008.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00009.pdb 1 --DLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 58 usage_00010.pdb 1 -RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 59 usage_00022.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00023.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00039.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00040.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00041.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00042.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00047.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00070.pdb 1 --DLFQAFRSQAGEELVLQDNVFVEQVLPGWILRPLSEAEMAAYREPFLAAGEARRPTLS 58 usage_00072.pdb 1 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 60 usage_00073.pdb 1 VRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLS 60 usage_00078.pdb 1 -REMFQALRSPAGEEMVLEKNLFVEALVPGSILRDLTEEEMNEYRRPFANAGEDRRPTLT 59 FQafRS aGEe vL N FVE vlPG ILR Lse EM YR PF aGE RRPTLs usage_00002.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 119 usage_00003.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00004.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00005.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00006.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00007.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00008.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRIRDFCRTWPNQTEI 119 usage_00009.pdb 59 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRIRDFCRTWPNQTEI 118 usage_00010.pdb 60 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGHLTTGRMRDFCRTWPNQTEI 119 usage_00022.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00023.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00039.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00040.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00041.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00042.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00047.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00070.pdb 59 WPRQLPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 118 usage_00072.pdb 61 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 120 usage_00073.pdb 61 WPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQTEI 120 usage_00078.pdb 60 FPRQVPIEGQPKDVTELVDAYVDWLGQTSIPKLFINADPGVLITGEVRDRVRSWPNLTEV 119 wPRq PI G PadVva Y WL e iPKLFINAePG l TGr RD R WPNqTEi usage_00002.pdb 120 TVA 122 usage_00003.pdb 120 T-- 120 usage_00004.pdb 120 T-- 120 usage_00005.pdb 120 T-- 120 usage_00006.pdb 120 TVA 122 usage_00007.pdb 120 T-- 120 usage_00008.pdb 120 TVA 122 usage_00009.pdb 119 T-- 119 usage_00010.pdb 120 T-- 120 usage_00022.pdb 121 TVA 123 usage_00023.pdb 121 TVA 123 usage_00039.pdb 121 T-- 121 usage_00040.pdb 121 TVA 123 usage_00041.pdb 121 TVA 123 usage_00042.pdb 121 TVA 123 usage_00047.pdb 121 TVA 123 usage_00070.pdb 119 TVA 121 usage_00072.pdb 121 TVA 123 usage_00073.pdb 121 TVP 123 usage_00078.pdb 120 T-- 120 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################