################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:50 2021 # Report_file: c_1441_20.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01061.pdb # 2: usage_01062.pdb # 3: usage_01063.pdb # 4: usage_01100.pdb # 5: usage_01140.pdb # 6: usage_01376.pdb # 7: usage_01377.pdb # 8: usage_01378.pdb # 9: usage_01379.pdb # 10: usage_01380.pdb # 11: usage_01381.pdb # # Length: 23 # Identity: 0/ 23 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 23 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 23 ( 87.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01061.pdb 1 ----------DVDVAAP----AV 9 usage_01062.pdb 1 ----------DVDVAAP----AV 9 usage_01063.pdb 1 DVDV----------AAPAV---- 9 usage_01100.pdb 1 ----LPICKE----QVQ--SC-- 11 usage_01140.pdb 1 ----LPRISV----AAP--RL-- 11 usage_01376.pdb 1 ----LPRISV----AAP--RL-- 11 usage_01377.pdb 1 -----PRISV----AAP--RL-- 10 usage_01378.pdb 1 ----LPRISV----AAP--RL-- 11 usage_01379.pdb 1 -----PRISV----AAP--RL-- 10 usage_01380.pdb 1 -----PRISV----AAP--RL-- 10 usage_01381.pdb 1 -----PRISV----AAP--RL-- 10 aap #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################