################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:02 2021 # Report_file: c_0495_15.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00012.pdb # 2: usage_00036.pdb # 3: usage_00037.pdb # 4: usage_00056.pdb # 5: usage_00071.pdb # 6: usage_00115.pdb # 7: usage_00116.pdb # 8: usage_00117.pdb # 9: usage_00162.pdb # 10: usage_00163.pdb # 11: usage_00164.pdb # 12: usage_00165.pdb # # Length: 115 # Identity: 6/115 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/115 ( 14.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/115 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 --LANRQAWFDARARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00036.pdb 1 --LENRHQWLENRNRD--G-FPVLVAER-EGQVVGYASYG-P-FRPFEGFR-----HSSE 47 usage_00037.pdb 1 --LENRHQWLENRNRD--G-FPVLVAER-EGQVVGYASYG-P-FRPFEGFR-----HSSE 47 usage_00056.pdb 1 --LENRHQWLENRNRD--G-FPVLVAER-EGQVVGYASYG-P-FRPFEGFR-----HSSE 47 usage_00071.pdb 1 ASGRFYAQWIENAVRGTFD-HQCLILRAASGDIRGYVSLR---EL----NA-----TDAR 47 usage_00115.pdb 1 --LANRQAWFDARARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00116.pdb 1 --LANRQAWFDARARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00117.pdb 1 --LANRQAWFDARARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00162.pdb 1 --LENRKDWFAARTSR--G-FPVIVAIL-DGKVAGYASYG-D-WRAFDGYR-----HTRE 47 usage_00163.pdb 1 --LANRQAWFDTRARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00164.pdb 1 --LANRQAWFDTRARQ--G-YPILVASDAAGEVLGYASYG-D-WRPFEGFR-----GTVE 48 usage_00165.pdb 1 ---VSYVRAFKEIKKD--KNNELIVACN-GEEIVGMLQVTFTPYL------TYQGSWRAT 48 w va g Gy s usage_00012.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHV-VAAIESGNAASIGLHRRLG 100 usage_00036.pdb 48 -L-SVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQG 100 usage_00037.pdb 48 -L-SVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQG 100 usage_00056.pdb 48 -L-SVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQG 100 usage_00071.pdb 48 -IGLLAG------RGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSG 95 usage_00115.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLG 101 usage_00116.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLG 101 usage_00117.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLG 101 usage_00162.pdb 48 -H-SVYVHKDARGHGIGKRL-QALIDHAGGNDVHVLIAAIEAENTASIRLHESLG 99 usage_00163.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHV-VAAIESGNAASIGLHRRLG 100 usage_00164.pdb 49 -H-SVYVRDDQRGKGLGVQLLQALIERARAQGLHV-VAAIESGNAASIGLHRRLG 100 usage_00165.pdb 49 IE-GVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLG 102 v G G L i A h n a G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################