################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:57 2021 # Report_file: c_1440_96.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00177.pdb # 2: usage_00266.pdb # 3: usage_00267.pdb # 4: usage_00607.pdb # # Length: 87 # Identity: 6/ 87 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 87 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 87 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 DDLWIALRHKHIAEVSQEVTRSLKDFSSSKRMMRDLSQMLKKMPQ----Y---------- 46 usage_00266.pdb 1 DDLWVEMRHQHIAVVSQNVTKKLKQFADEKR----LSQ----MLKKMPQY---------- 42 usage_00267.pdb 1 DDLWVEMRHQHIAVVSQNVTKKLKQFADEKR----LSQ----MLKKMPQY---------- 42 usage_00607.pdb 1 DF-FWENSHLPFPEAAENVEAALNTYKEEAA-------------------EITRKTEVVK 40 Dd w e rH hia vsqnVt Lk f ekr usage_00177.pdb 47 -QKELSKYST---HLHLAEDCMKHY-- 67 usage_00266.pdb 43 -QKELSKYST---HLHLAEDCMKQYQ- 64 usage_00267.pdb 43 -QKELSKYST---HLHLAEDCMKQYQ- 64 usage_00607.pdb 41 KLPELTAKKNTIDTHNIFAALLSQLES 67 qkELskyst hlhlaedcmkqy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################