################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:18 2021 # Report_file: c_1378_32.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00118.pdb # 2: usage_00122.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_00127.pdb # 6: usage_00130.pdb # 7: usage_00328.pdb # 8: usage_00800.pdb # 9: usage_00801.pdb # 10: usage_00913.pdb # # Length: 43 # Identity: 31/ 43 ( 72.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 43 ( 74.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 43 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00118.pdb 1 GKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 43 usage_00122.pdb 1 GKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 43 usage_00124.pdb 1 -KVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 42 usage_00125.pdb 1 -KVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 42 usage_00127.pdb 1 -KVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 42 usage_00130.pdb 1 ---DFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 40 usage_00328.pdb 1 -KVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 42 usage_00800.pdb 1 KKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAI 43 usage_00801.pdb 1 KKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAI 43 usage_00913.pdb 1 GKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLA 43 DFLLSVIG AVDL NVWRFPY Cy NGGGAFL PY IM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################