################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:31 2021 # Report_file: c_0224_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00053.pdb # 2: usage_00110.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00118.pdb # 6: usage_00182.pdb # 7: usage_00183.pdb # # Length: 139 # Identity: 113/139 ( 81.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/139 ( 81.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/139 ( 18.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00110.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00116.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00117.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00118.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00182.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 usage_00183.pdb 1 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG 60 PFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFG usage_00053.pdb 61 EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 119 usage_00110.pdb 61 EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 119 usage_00116.pdb 61 EASPVGEVRYEAPFYDYETK-YTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 119 usage_00117.pdb 61 EASPVGEVRYEAPFY-------P-GRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 112 usage_00118.pdb 61 EASPVGEVRYEAPFY----TKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 116 usage_00182.pdb 61 EASPVGEVR------------------ELLIPAPLDPGTQETVQELALKAYKVLGVRGMA 102 usage_00183.pdb 61 EASPVGEVRYEA---------------ELLIPAPLD--TQETVQELALKAYKVLGVRGMA 103 EASPVGEVR ELLIPAPLD TQETVQELALKAYKVLGVRGMA usage_00053.pdb 120 RVDFFLAEGELYL------ 132 usage_00110.pdb 120 RVDFFLAEGELYL------ 132 usage_00116.pdb 120 RVDFFLAEGELYL------ 132 usage_00117.pdb 113 RVDFFLAEGELYL------ 125 usage_00118.pdb 117 RVDFFLAEGELYL------ 129 usage_00182.pdb 103 RVDFFLAEGELYL------ 115 usage_00183.pdb 104 RVDFFLAEGELYLNELNTI 122 RVDFFLAEGELYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################