################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:49 2021 # Report_file: c_1409_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00390.pdb # 2: usage_00886.pdb # 3: usage_01401.pdb # 4: usage_01402.pdb # 5: usage_01403.pdb # 6: usage_01458.pdb # # Length: 78 # Identity: 11/ 78 ( 14.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 78 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 78 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00390.pdb 1 -PVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTK--PLTYPVKRTTKMAGMMIAAAWV 57 usage_00886.pdb 1 -NILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCH--PVKALDFRTPRNAKIVNVCNWI 57 usage_01401.pdb 1 -NLACDLWLSIDYVASNASVMNLLVISFDRYFSITR--PLTYRAKRTTKRAGVMIGLAWV 57 usage_01402.pdb 1 GNLACDLWLSIDYVASNASVMNLLVISFDRYFSITR--PLTYRAKRTTKRAGVMIGLAWV 58 usage_01403.pdb 1 GNLACDLWLSIDYVASNASVMNLLVISFDRYFSITR--PLTYRAKRTTKRAGVMIGLAWV 58 usage_01458.pdb 1 -NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQS--LLTKNKARVIILMVWI 57 n C w siDy aS L is DRYf t p rT A i W usage_00390.pdb 58 LSFILWAPAILFWQFIVG 75 usage_00886.pdb 58 LSSAIGLPVMFM------ 69 usage_01401.pdb 58 ISFVLWAPAILFWQYFVG 75 usage_01402.pdb 59 ISFVLWAPAILFWQYFVG 76 usage_01403.pdb 59 ISFVLWAPAILFWQYFVG 76 usage_01458.pdb 58 VSGLTSFLPIQMH----- 70 S p i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################