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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:37:40 2021
# Report_file: c_0976_6.html
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#====================================
# Aligned_structures: 7
#   1: usage_00040.pdb
#   2: usage_00051.pdb
#   3: usage_00115.pdb
#   4: usage_00116.pdb
#   5: usage_00117.pdb
#   6: usage_00118.pdb
#   7: usage_00139.pdb
#
# Length:         62
# Identity:        4/ 62 (  6.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      6/ 62 (  9.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           17/ 62 ( 27.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00040.pdb         1  AVLIRSVAT---DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA-----   52
usage_00051.pdb         1  --CVESLPDKDGKKCLFLVKCF-----DKTFEISASDKKKKQEWIQAIHSTIHLLKLGS-   52
usage_00115.pdb         1  TCQVKPNAE---DKKSFDLISH-----NRTYHFQAEDEQDYIAWISVLTNSKEEALTMAF   52
usage_00116.pdb         1  -CQVKPNAE---DKKSFDLISH-----NRTYHFQAEDEQDYIAWISVLTNSKEEALTMAF   51
usage_00117.pdb         1  TCQVKPNAE---DKKSFDLISH-----NRTYHFQAEDEQDYIAWISVLTNSKEEALTM--   50
usage_00118.pdb         1  -CQVKPNAE---DKKSFDLISH-----NRTYHFQAEDEQDYIAWISVLTNSKEEALTM--   49
usage_00139.pdb         1  -LAVVNVKDNPPMKDMFKLLMF-----PESRIFQAENAKIKREWLEVLEETKRALSDKR-   53
                              v         K  F                 A        W   l            

usage_00040.pdb            --     
usage_00051.pdb            --     
usage_00115.pdb        53  RG   54
usage_00116.pdb        52  RG   53
usage_00117.pdb            --     
usage_00118.pdb            --     
usage_00139.pdb            --     
                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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