################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:26:08 2021 # Report_file: c_0145_29.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00096.pdb # 2: usage_00147.pdb # 3: usage_00213.pdb # 4: usage_00214.pdb # 5: usage_00236.pdb # 6: usage_00249.pdb # 7: usage_00272.pdb # 8: usage_00273.pdb # 9: usage_00274.pdb # 10: usage_00292.pdb # 11: usage_00313.pdb # 12: usage_00314.pdb # 13: usage_00315.pdb # 14: usage_00316.pdb # 15: usage_00327.pdb # 16: usage_00384.pdb # 17: usage_00385.pdb # 18: usage_00455.pdb # 19: usage_00487.pdb # 20: usage_00521.pdb # # Length: 148 # Identity: 40/148 ( 27.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/148 ( 39.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/148 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 -VQLVESGGGSVQAGGSLRLSCAASG-Y---TVST-YCMGWFRQAPGKEREGVATILG-- 52 usage_00147.pdb 1 --QLQESGGGLVQPGGSLRLSCAASG-R---TFSS-YAMGWFRQAPGKQREFVAAIRWSG 53 usage_00213.pdb 1 -VQLQESGGGLVQAGGSLRLSCTASR-R---T-GSNWCMGWFRQLAGKEPELVVALNFDY 54 usage_00214.pdb 1 --QLQESGGGLVQAGGSLRLSCTASR-R---T-GSNWCMGWFRQLAGKEPELVVALNFDY 53 usage_00236.pdb 1 --QLQESGGGLVQAGDSLRLSCAASG-FDFDNFDD-YAIGWFRQAPGQEREGVSCIDPSD 56 usage_00249.pdb 1 --QLQASGGGSVQAGGSLRLSCAASG-Y---TIGP-YCMGWFRQAPGKEREGVAAINMGG 53 usage_00272.pdb 1 QVQLVESGGGSVQAGGSLSLSCAAST-Y------T-DTVGWFRQAPGKEREGVAAIYRRT 52 usage_00273.pdb 1 QVQLVESGGGSVQAGGSLSLSCAAST-Y------T-DTVGWFRQAPGKEREGVAAIYRRT 52 usage_00274.pdb 1 QVQLVESGGGSVQAGGSLSLSCAAST-Y------T-DTVGWFRQAPGKEREGVAAIYRRT 52 usage_00292.pdb 1 --QLQESGGGLVPAGGSLRLSCVDSG-R------S-TVMAWFRQAPGKEREFVATIRWSG 50 usage_00313.pdb 1 --QLVESGGGSVQAGGSLRLSCAASG-F---TYSR-KYMGWFRQAPGKEREGVAAIFIDN 53 usage_00314.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASG-R---TFSS-DVMGWFRQAPGKEREFVAAVTRSG 54 usage_00315.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASG-R---TFSS-DVMGWFRQAPGKEREFVAAVTRSG 54 usage_00316.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASG-R---TFSS-DVMGWFRQAPGKEREFVAAVTRSG 54 usage_00327.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASG-Y---P-HPYLHMGWFRQAPGKEREGVAAMDSGG 55 usage_00384.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASG-R---TFSS-FVMGWFRQAPGKEREFVASISRSG 55 usage_00385.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASG-R---TFSS-FVMGWFRQAPGKEREFVASISRSG 55 usage_00455.pdb 1 --QLQESGGGLVQAGGSLRLSCTASG-R---TFSS-YAMGWFRQTPGKEREFVAAITWGG 53 usage_00487.pdb 1 --QLQESGGGTVQPGGSLKLSCSAAPER---AFSN-YAMGWFRQAPGQEREFVAGITGSG 54 usage_00521.pdb 1 --QLVETGGGLVQPGESLRLSCVASG-F---TLDH-SAVGWFRQVPGKEREKLLCINANG 53 QL esGGG Vq G SL LSC as gWFRQ G e E v usage_00096.pdb 53 GSTYY-GDSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAGSTV---A-S---TGWC 104 usage_00147.pdb 54 GYTYY-TDSVKGRFTISRD---TTVYLQMNSLKPEDTAVYYCAATYLS-SD-YSRYA--- 104 usage_00213.pdb 55 DMTYY-ADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG---G-F------- 102 usage_00214.pdb 54 DMTYY-ADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG---G-F------- 101 usage_00236.pdb 57 GSTIY-ADSAKGRFTISSDNAENTVYLQMNSLKPEDTAVYVCSAWTLFH----------- 104 usage_00249.pdb 54 GITYY-ADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST---IYA--SY--- 104 usage_00272.pdb 53 GYTYS-ADSVKGRFTLSQDNNKNTVYLQMNSLKPEDTGIYYCATGNS---V-R------- 100 usage_00273.pdb 53 GYTYS-ADSVKGRFTLSQDNNKNTVYLQMNSLKPEDTGIYYCATGNS---V-R------- 100 usage_00274.pdb 53 GYTYS-ADSVKGRFTLSQDNNKNTVYLQMNSLKPEDTGIYYCATGNS---V-R------- 100 usage_00292.pdb 51 GNTYY-ADSVKGRFTISRDNARNTVYLQMNSLKPEDTAVYYCAGGTY---Y-G------- 98 usage_00313.pdb 54 GNTIY-ADSVQGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAASSR---W-MD-YS--- 104 usage_00314.pdb 55 GK-SYNADSVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCAAGDT--AITS------- 104 usage_00315.pdb 55 GK-SYNADSVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCAAGDT--AITS------- 104 usage_00316.pdb 55 GK-SYNADSVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCAAGDT--AITS------- 104 usage_00327.pdb 56 GGTLY-ADSVKGRFTISRDKGKNTVYLQMDSLKPEDTATYYCAAG-G---Y--------- 101 usage_00384.pdb 56 SVTRY-ADSAKGRFTISKDNAKNTVSLQMDNLNPDDTAVYYCAADLH---RPY--GP--- 106 usage_00385.pdb 56 SVTRY-ADSAKGRFTISKDNAKNTVSLQMDNLNPDDTAVYYCAADLH---RPY--GP--- 106 usage_00455.pdb 54 STTLY-ADSVKGRFTMSRDNAKNTVYLQMNSLKPEDTAVYYCAADGS---Q-Y--RS--- 103 usage_00487.pdb 55 RSQYY-ADSVKGRFTISRDNAMNAVYLQMNSVKAEDTAVYYCAARVV---P-V------- 102 usage_00521.pdb 54 -VSLDYADSIKGRFTISRDNAKNTVYLQMNDLKPEDTATYSCAATRE---F--------- 100 DS kGRFT S D ntV LqM l p DT Y Ca usage_00096.pdb 105 S-----RL--RPYDYHYRGQGTQVTVSS 125 usage_00147.pdb 105 L-----PQ--RPLDYDYWGQGTQVTVS- 124 usage_00213.pdb 103 ------SS--NRELYDGWGQGTQVTV-- 120 usage_00214.pdb 102 ------SS--NRELYDGWGQGTQVTVS- 120 usage_00236.pdb 105 -------------SDEYWGQGTQVTV-- 117 usage_00249.pdb 105 YECGHGL-STGGYGYDSWGQGTQVTVS- 130 usage_00272.pdb 101 ------LA--SWEGYFYWGQGTQVTVS- 119 usage_00273.pdb 101 ------LA--SWEGYFYWGQGTQVTV-- 118 usage_00274.pdb 101 ------LA--SWEGYFYWGQGTQVTV-- 118 usage_00292.pdb 99 ------T---LSYKYDFWGRGTQVTVS- 116 usage_00313.pdb 105 ------AL--TAKAYNSWGQGTQVTV-- 122 usage_00314.pdb 105 ------W-----YGYDYWGQGTQVTV-- 119 usage_00315.pdb 105 ------W-----YGYDYWGQGTQVTV-- 119 usage_00316.pdb 105 ------W-----YGYDYWGQGTQVTV-- 119 usage_00327.pdb 102 ------EL--RDRTYGHWGQGTQVTVS- 120 usage_00384.pdb 107 G-----SQ--RTDDYDTWGQGTQVTV-- 125 usage_00385.pdb 107 G-----SQ--RTDDYDTWGQGTQVTVS- 126 usage_00455.pdb 104 --TYSFR--DK-PDYGSWGQGTQVTVS- 125 usage_00487.pdb 103 F-----SD--STKGYVYWGQGTQVTV-- 121 usage_00521.pdb 101 C-----SA--YVFLYEHWGQGTQVTVS- 120 y wGqGTQVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################