################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:11:11 2021 # Report_file: c_0413_9.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00047.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00050.pdb # 8: usage_00051.pdb # 9: usage_00052.pdb # 10: usage_00053.pdb # 11: usage_00054.pdb # 12: usage_00055.pdb # 13: usage_00056.pdb # 14: usage_00058.pdb # 15: usage_00072.pdb # 16: usage_00099.pdb # 17: usage_00149.pdb # 18: usage_00195.pdb # 19: usage_00202.pdb # # Length: 64 # Identity: 7/ 64 ( 10.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 64 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 64 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 MIDVHQLKKSFG---SLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGE 57 usage_00004.pdb 1 MIDVHQLKKSFG---SLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGE 57 usage_00005.pdb 1 MIDVHQLKKSFG---SLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGE 57 usage_00047.pdb 1 -----NVTKTYKGEEIIYALKNVNLNIKEGEFVSI-GPSGSGKST-LNIIGCLDKPTEGE 53 usage_00048.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00049.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00050.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00051.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00052.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00053.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00054.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00055.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00056.pdb 1 MIFVNDVYKNFG---SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGE 57 usage_00058.pdb 1 ILRTENIVKYFG---EFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGR 57 usage_00072.pdb 1 ILRTENIVKYFG---EFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGR 57 usage_00099.pdb 1 AVVVKDLRKRIG---KKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGI 57 usage_00149.pdb 1 IIRIRNLHKWFG---PLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGE 57 usage_00195.pdb 1 VLEVQSLHVYYG---AIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGK 57 usage_00202.pdb 1 IIRIRNLHKWFG---PLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGE 57 k g l g G Gp G GK T G usage_00003.pdb 58 III- 60 usage_00004.pdb 58 III- 60 usage_00005.pdb 58 III- 60 usage_00047.pdb 54 VYI- 56 usage_00048.pdb 58 VFID 61 usage_00049.pdb 58 VFID 61 usage_00050.pdb 58 VFID 61 usage_00051.pdb 58 VFID 61 usage_00052.pdb 58 VFID 61 usage_00053.pdb 58 VFID 61 usage_00054.pdb 58 VFID 61 usage_00055.pdb 58 VFI- 60 usage_00056.pdb 58 VFI- 60 usage_00058.pdb 58 VYF- 60 usage_00072.pdb 58 VYF- 60 usage_00099.pdb 58 VTV- 60 usage_00149.pdb 58 VVVD 61 usage_00195.pdb 58 IIF- 60 usage_00202.pdb 58 VVV- 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################