################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:29:25 2021 # Report_file: c_0148_2.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00017.pdb # 2: usage_00022.pdb # 3: usage_00026.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00051.pdb # 7: usage_00064.pdb # 8: usage_00091.pdb # 9: usage_00101.pdb # 10: usage_00109.pdb # 11: usage_00116.pdb # 12: usage_00139.pdb # 13: usage_00140.pdb # 14: usage_00141.pdb # 15: usage_00142.pdb # 16: usage_00169.pdb # 17: usage_00170.pdb # 18: usage_00172.pdb # 19: usage_00173.pdb # 20: usage_00190.pdb # 21: usage_00218.pdb # 22: usage_00223.pdb # 23: usage_00225.pdb # 24: usage_00274.pdb # 25: usage_00275.pdb # 26: usage_00280.pdb # 27: usage_00281.pdb # 28: usage_00290.pdb # 29: usage_00291.pdb # 30: usage_00298.pdb # 31: usage_00322.pdb # 32: usage_00325.pdb # 33: usage_00327.pdb # # Length: 114 # Identity: 31/114 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/114 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/114 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 DVLMTQTPLSLPVSLGDQASISCRSSQTIVHSNGNTYLEWYLQKPGQSPKLLIYKVTNRF 60 usage_00022.pdb 1 DVLMTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYLEWYLQKPGQSPNLLIYKLSNRF 60 usage_00026.pdb 1 DIVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRA 60 usage_00027.pdb 1 DIVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRA 60 usage_00028.pdb 1 -IVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRA 59 usage_00051.pdb 1 DIVMTQTPLSLSVTPGQPASISCRSSQSIVHSDGNIYLEWYLQKPGQSPKLLIYKVSYRF 60 usage_00064.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRF 59 usage_00091.pdb 1 -VLMTQAPLTLPVSLGDQASISCRSSQAIVHANGNTYLEWYLQKPGQSPALLIYKVANRF 59 usage_00101.pdb 1 -LVMTQSPLSLPVSLGDQASISCRSSQSLVHSSGNTYLHWYLQKPGQSPKLLIYKVSNRF 59 usage_00109.pdb 1 -VVMTQTPLSLPVSLGDPASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRF 59 usage_00116.pdb 1 DIVMTQTPLSLSVTPGQPASISCRSSQSIVHSNGNTYLEWYLQKPGQSPQLLIYKVSNRF 60 usage_00139.pdb 1 --LMNQTPLSLPVSLGDQASISCRSSQYIVHRNGNTYLEWYLQKPGQSPKLLIYKVSNRF 58 usage_00140.pdb 1 -ILMNQTPLSLPVSLGDQASISCRSSQYIVHRNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00141.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00142.pdb 1 -ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRF 59 usage_00169.pdb 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00170.pdb 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRF 60 usage_00172.pdb 1 EIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGNTYLNWFLQRPGQSPQLLIYRMSNLA 60 usage_00173.pdb 1 -IVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLA 59 usage_00190.pdb 1 --VMTQSPLSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTRA 58 usage_00218.pdb 1 -IVMTQTPSSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00223.pdb 1 -VVMTQTPLSLPVSLGDQASISCRSSQTIVHSNGYTYLDWYLQKPGQSPKLLIYKVSNRF 59 usage_00225.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSGQSLLYSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00274.pdb 1 --VMTQSPLSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTRA 58 usage_00275.pdb 1 -IVMTQSPLSLSVTPGEPASISCRSSQSLLRRDGHNDLEWYLQKPGQSPQPLIYLGSTRA 59 usage_00280.pdb 1 DIVMTQSPDSLAVSLGERATINCRSSQSIVHSTGNTYLEWYQQKPGQPPKLLIYKVSNRF 60 usage_00281.pdb 1 DIVMTQSPDSLAVSLGERATINCRSSQSIVHSTGNTYLEWYQQKPGQPPKLLIYKVSNRF 60 usage_00290.pdb 1 --LMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRF 58 usage_00291.pdb 1 --LMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRF 58 usage_00298.pdb 1 -LVMTQTPLSLPVSLGDQASISCRSSQSLVHSYGNTFLNWYLQKSGQSPKLLIYKVSNRF 59 usage_00322.pdb 1 -VVMTQTPITLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00325.pdb 1 -VLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRF 59 usage_00327.pdb 1 --VMTQTPLSLPVTPGEPASISCTSGQSLVHINGNTYLHWYLQKPGQSPKLLIYKVSNLF 58 M Q V G I C G L W Q pG P LIY usage_00017.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGTHAPYTFGGGTKLEIKRA 114 usage_00022.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPPTFGGGTKLEIKRA 114 usage_00026.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIK-RT 113 usage_00027.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIK-RT 113 usage_00028.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIK-RT 112 usage_00051.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQASHVPYTFGQGTKLEI--- 111 usage_00064.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPWTFGGGTKLEI--- 110 usage_00091.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGAHAPYTFGGGTKLEI--- 110 usage_00101.pdb 60 SGVPDRFSGSGSGTDFTLTISRVEAEDLGVYYCFQGSHVPLTFGAGTKLEL--- 110 usage_00109.pdb 60 SGVPDKFSGSGSGTDFTLKISRVEAEDQGVYFCSQSTHVPWTFGGGTKLEI--- 110 usage_00116.pdb 61 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPPTFGGGTKVEI--- 111 usage_00139.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEL--- 109 usage_00140.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEL--- 110 usage_00141.pdb 60 SGVPDRFSGSGSGTDFTLKINRVEAEDLGIYYCLQGSHVPLTFGAGTTLEL--- 110 usage_00142.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEI--- 110 usage_00169.pdb 61 SGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLEL--- 111 usage_00170.pdb 61 SGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLEL--- 111 usage_00172.pdb 61 SGVPDRFSGSGSETAFTLRTSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEL--- 111 usage_00173.pdb 60 SGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCLQHLEYPFTFGAGTKLEL--- 110 usage_00190.pdb 59 SGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEI--- 109 usage_00218.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSLVPPTFGAGTKLEL--- 110 usage_00223.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEI--- 110 usage_00225.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPRTFGGGTKLEI--- 110 usage_00274.pdb 59 SGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEI--- 109 usage_00275.pdb 60 SGVPDRFSGSGSGTDFTLKIIRVEAEDAGTYYCMQNKQTPLTFGQGTRLEI--- 110 usage_00280.pdb 61 SGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCFHGTHVPYTFGGGTKVEI--- 111 usage_00281.pdb 61 SGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCFHGTHVPYTFGGGTKVEI--- 111 usage_00290.pdb 59 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLES--- 109 usage_00291.pdb 59 SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLES--- 109 usage_00298.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQGTHVPYTFGGGTKLEI--- 110 usage_00322.pdb 60 SRVPDRFTGSGAGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTKLEI--- 110 usage_00325.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEI--- 110 usage_00327.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYFCSQSTHFPFTFGQGTKLEI--- 109 SgVPDrF GSGsgT FTL i ED Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################