################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:26 2021 # Report_file: c_1357_76.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00351.pdb # 2: usage_00495.pdb # 3: usage_00496.pdb # 4: usage_00596.pdb # # Length: 79 # Identity: 34/ 79 ( 43.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 79 ( 43.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 79 ( 17.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00351.pdb 1 -TSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPM--------NAR-FNPQ--AEF 48 usage_00495.pdb 1 GTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKD--SDNNKAATPL 58 usage_00496.pdb 1 GTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLD--RKPIKD--SDNNKAATPL 56 usage_00596.pdb 1 -TSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPM--------NAR-FNPQ--AEF 48 TSM PH GIA K P WSP AI SA MTTA P N usage_00351.pdb 49 AYGSGHVNPLKAVRPGLVY 67 usage_00495.pdb 59 DMGAGHVDPNRALDPGLVY 77 usage_00496.pdb 57 DMGAGHVDPNRALDPGLVY 75 usage_00596.pdb 49 AYGSGHVNPLKAVRPGLVY 67 G GHV P A PGLVY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################