################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:50:08 2021 # Report_file: c_1429_28.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00341.pdb # 2: usage_00342.pdb # 3: usage_00343.pdb # 4: usage_00344.pdb # 5: usage_00345.pdb # 6: usage_00615.pdb # 7: usage_00647.pdb # 8: usage_00680.pdb # 9: usage_00812.pdb # 10: usage_00974.pdb # 11: usage_00975.pdb # 12: usage_00984.pdb # 13: usage_01033.pdb # 14: usage_01034.pdb # 15: usage_01035.pdb # 16: usage_01036.pdb # 17: usage_01037.pdb # 18: usage_01038.pdb # 19: usage_01039.pdb # 20: usage_01058.pdb # 21: usage_01059.pdb # 22: usage_01645.pdb # # Length: 68 # Identity: 29/ 68 ( 42.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 68 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 68 ( 45.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00341.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_00342.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_00343.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_00344.pdb 1 DQKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 52 usage_00345.pdb 1 DQKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 52 usage_00615.pdb 1 DQKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 52 usage_00647.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_00680.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVMFGVPSVIV 59 usage_00812.pdb 1 -QKTATELLWKSYPIVNVSKELTPVATEKYLGGTDDPVKKKDLFLDMLADLL-------- 51 usage_00974.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLG-----VKKKDLFLDLIADVM-------- 46 usage_00975.pdb 1 ----AMSLLWKSYPLV-----LIPEATEKYLGGTDDTVKKKDLFLDLIADVMFGVPSVIV 51 usage_00984.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01033.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01034.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01035.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01036.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01037.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01038.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01039.pdb 1 DQKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADV--------- 51 usage_01058.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01059.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 usage_01645.pdb 1 -QKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVM-------- 51 AmsLLWKSYPlV LiPeATEKYLG VKKKDLFLDliADv usage_00341.pdb -------- usage_00342.pdb -------- usage_00343.pdb -------- usage_00344.pdb -------- usage_00345.pdb -------- usage_00615.pdb -------- usage_00647.pdb -------- usage_00680.pdb 60 ARNHRDAG 67 usage_00812.pdb -------- usage_00974.pdb -------- usage_00975.pdb 52 ARNHRDA- 58 usage_00984.pdb -------- usage_01033.pdb -------- usage_01034.pdb -------- usage_01035.pdb -------- usage_01036.pdb -------- usage_01037.pdb -------- usage_01038.pdb -------- usage_01039.pdb -------- usage_01058.pdb -------- usage_01059.pdb -------- usage_01645.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################