################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:23 2021 # Report_file: c_0835_78.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00034.pdb # 2: usage_00234.pdb # 3: usage_00251.pdb # 4: usage_00573.pdb # 5: usage_00700.pdb # 6: usage_00739.pdb # 7: usage_00741.pdb # 8: usage_00861.pdb # 9: usage_00862.pdb # 10: usage_00895.pdb # 11: usage_01259.pdb # 12: usage_01352.pdb # 13: usage_01353.pdb # # Length: 91 # Identity: 20/ 91 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 91 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 91 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -KVKRDRFVGSVKEFLQTWKFFDGVDIDWLFPGGKGANPNLGSP-QDGETYVLLMKELRA 58 usage_00234.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_00251.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWQFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_00573.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_00700.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_00739.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_00741.pdb 1 ---KRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 56 usage_00861.pdb 1 ---KRNVFVDSVKEFLQVWKFFDGVDVDWEFPGGKGANPSLGDAERDAKTYILLLEELRA 57 usage_00862.pdb 1 -VEKRNVFVDSVKEFLQVWKFFDGVDVDWEFPGGKGANPSLGDAERDAKTYILLLEELRA 59 usage_00895.pdb 1 -STSRLEFINSIILFLRNHN-FDGLDVSWIYPD----------Q-KENTHFTVLIHELAE 47 usage_01259.pdb 1 ----RDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 55 usage_01352.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 usage_01353.pdb 1 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRA 59 R Fv SvkeFLq wk FDGvD dW fPg d ty lL ELra usage_00034.pdb 59 MLDQLSVETGRK-YELTSAISAGKDKIDKVA 88 usage_00234.pdb 60 MLDQLSVETGRK-YELTSAISAGKDKIDKV- 88 usage_00251.pdb 60 MLDQLSVETGRK-YELTSAISAGKDKIDKVA 89 usage_00573.pdb 60 MLDQLSAETGRK-YELTSAISAGKDKIDKV- 88 usage_00700.pdb 60 MLDQLSVETGRK-YELTSAISAGKDKIDKV- 88 usage_00739.pdb 60 MLDQLSAETGRK-YELTSAISAGKDKIDKV- 88 usage_00741.pdb 57 MLDQLSAETGRK-YELTSAISAGKDKIDKVA 86 usage_00861.pdb 58 MLDDLEAQTGRV-YELTSAISAGYDKIAVV- 86 usage_00862.pdb 60 MLDDLEAQTGRV-YELTSAISAGYDKIAVV- 88 usage_00895.pdb 48 AFQKDFTKSTKERLLLTAGVSAGRQMIDNS- 77 usage_01259.pdb 56 MLDQLSTETGRK-YELTSAISAGKDKIDKV- 84 usage_01352.pdb 60 MLDQLSAETGRK-YELTSAISAGKDKIDKV- 88 usage_01353.pdb 60 MLDQLSAETGRK-YELTSAISAGKDKIDKV- 88 mld l tgr yeLTsaiSAG dkI v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################