################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:40 2021 # Report_file: c_1086_14.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00055.pdb # 6: usage_00056.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00128.pdb # # Length: 30 # Identity: 17/ 30 ( 56.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 30 ( 56.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 30 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAVK- 28 usage_00052.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAV-- 27 usage_00053.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAVKG 29 usage_00054.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAV-- 27 usage_00055.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAV-- 27 usage_00056.pdb 1 -AEHADVIVVGNAVYEDFDRALKTVAAVK- 28 usage_00064.pdb 1 -ARYADTVVVGNAIYDAFEQALATVAAVK- 28 usage_00065.pdb 1 -ARYADTVVVGNAIYDAFEQALATVAAVKQ 29 usage_00128.pdb 1 YAEHADVIVVGNAVYEDFDRALKTVAAVK- 29 A AD VVGNA Y F AL TVAAV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################