################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:04 2021 # Report_file: c_1403_170.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00667.pdb # 2: usage_00968.pdb # 3: usage_01220.pdb # 4: usage_01221.pdb # # Length: 69 # Identity: 1/ 69 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 69 ( 10.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 69 ( 63.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00667.pdb 1 EAW-LSKACATL-A--G-SPISWHLAYIQTQLG---TKLSLAQCFKW------ELTVSVN 46 usage_00968.pdb 1 ---SKEEIEALEQELREAPEK--RAAQKTLAEEVTKLVHGEEA----------LRQAIR- 44 usage_01220.pdb 1 ----DSEAMAQLGQP--QSATILAYLLEHL-----------------PAEPALTVAMGQQ 37 usage_01221.pdb 1 ----DSEAMAQLGQP--QSATILAYLLEHL-----------------PAEPALTVAMGQQ 37 sea A l s l usage_00667.pdb 47 VCA------ 49 usage_00968.pdb --------- usage_01220.pdb 38 LIQQAAKAA 46 usage_01221.pdb 38 LIQQAAKAA 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################