################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:18 2021 # Report_file: c_0617_41.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00192.pdb # 2: usage_00193.pdb # 3: usage_00234.pdb # 4: usage_00235.pdb # 5: usage_00239.pdb # # Length: 74 # Identity: 21/ 74 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 74 ( 43.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 74 ( 1.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00192.pdb 1 VALAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNY 60 usage_00193.pdb 1 VALAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNY 60 usage_00234.pdb 1 VSVAAGVAP-SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDL 59 usage_00235.pdb 1 VSVAAGVAP-SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDL 59 usage_00239.pdb 1 VSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRY 60 V Aa s V GFp G p Ka E A GA EiDMVi ga g usage_00192.pdb 61 DLVLEDIKAVVAAS 74 usage_00193.pdb 61 DLVLEDIKAVVAAS 74 usage_00234.pdb 60 DAVSADITAVRKAV 73 usage_00235.pdb 60 DAVSADITAVRKAV 73 usage_00239.pdb 61 TDVFQDIRAVRLAA 74 d V DI AV A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################