################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:27 2021 # Report_file: c_0737_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00077.pdb # 2: usage_00102.pdb # 3: usage_00124.pdb # 4: usage_00132.pdb # 5: usage_00357.pdb # # Length: 91 # Identity: 14/ 91 ( 15.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 91 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 91 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 KTISVRVTTMD-AELEFAIQPNTT-GKQLFDQVVKTIGLREVWFF-GLQYQDTKGFSTWL 57 usage_00102.pdb 1 KPINVRVTTMD-AELEFAIQPNTT-GKQLFDQVVKTVGLREVWFF-GLQYVDSKGYSTWL 57 usage_00124.pdb 1 --MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDN--ATSKTWL 56 usage_00132.pdb 1 ---SVRVTTMD-AELEFAIQPNTT-GKQLFDQVVKTIGLREVWFF-GLQYQDTKGFSTWL 54 usage_00357.pdb 1 KPINVRVTTMD-AELEFAIQPNTT-GKQLFDQVVKTVGLREVWFF-GLQYVDSKGYSTWL 57 vrVttmD aelEfaiqpntt gkqLfdqvvkt gLrEvwFf glqy kg sTWL usage_00077.pdb 58 KLNKKVTAQD--VRKESPLLFK-FR------ 79 usage_00102.pdb 58 KLNKKVTQQD--VKKENPLQFK-FR------ 79 usage_00124.pdb 57 DSAKEIKKQVRG----VPWNFTFNVKFYPPD 83 usage_00132.pdb 55 KLNKKVTAQD--VRKESPLLFK-FR------ 76 usage_00357.pdb 58 KLNKKVTQQD--VKKENPLQFK-FR------ 79 klnKkvt Qd Pl Fk fr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################