################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:21 2021 # Report_file: c_1492_79.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00326.pdb # 2: usage_01400.pdb # 3: usage_01496.pdb # 4: usage_01497.pdb # 5: usage_01498.pdb # # Length: 65 # Identity: 12/ 65 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 65 ( 33.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 65 ( 58.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00326.pdb 1 SA--EIQLHHQKHHQGYVNGANAALEKLEKFRKGEA--QIDIRAVLRDLSFHLNGHILHS 56 usage_01400.pdb 1 --ARTMEIHHTKHHQTYVDNANKALEG-----TEFADL---------------------- 31 usage_01496.pdb 1 --EEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEI--QIDVRAVMRDFSFNYAGHIMHT 56 usage_01497.pdb 1 --EEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEI--QIDVRAVMRDFSFNYAGHIMHT 56 usage_01498.pdb 1 --EEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEI--QIDVRAVMRDFSFNYAGHIMHT 56 m lHHqKHH tYV gANaALEk kge usage_00326.pdb 57 IFWPN 61 usage_01400.pdb ----- usage_01496.pdb 57 IFWPN 61 usage_01497.pdb 57 IFWPN 61 usage_01498.pdb 57 IFWPN 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################