################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:31 2021 # Report_file: c_0702_25.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00030.pdb # 2: usage_00056.pdb # 3: usage_00083.pdb # 4: usage_00088.pdb # # Length: 55 # Identity: 5/ 55 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 55 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 55 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 LVQLI------EPPFLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHIN 49 usage_00056.pdb 1 LKYF-KDQMSPEP-IRILDLTECSAVQFDY-SQERV-NCFCLVF--P-FRTFYLC 48 usage_00083.pdb 1 LIQIT------EPPFLVITLEDVEWAHLERVQFGLKNFDLVFVFKDFTRPVVHIN 49 usage_00088.pdb 1 LIQIT------EPPFLVITLEDVEWAHLERVQFGLKNFDLVFVFKDFTRPVVHIN 49 L q EP flvi Le ve ler qfglk fd vfVf f pv hin #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################