################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:12 2021 # Report_file: c_0581_50.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00187.pdb # 4: usage_00510.pdb # 5: usage_00541.pdb # # Length: 81 # Identity: 22/ 81 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 81 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 81 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 EEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIK 60 usage_00035.pdb 1 ----GTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIK 56 usage_00187.pdb 1 ----AVLVVIYDHHQRELNQRMIDIFHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQ 56 usage_00510.pdb 1 ESKIAVLVVIYDAHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQ 60 usage_00541.pdb 1 ----AVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQ 56 Y h D qH H HMDEHNCLE I G I usage_00034.pdb 61 MIADKLLSLKGVKHGKLVMTS 81 usage_00035.pdb 57 MIADKLLSLKGVKHGKLVMTS 77 usage_00187.pdb 57 RLQLEIGGLRGVKFAKLTK-- 75 usage_00510.pdb 61 RLQLEIGGLRGVKFAKLTK-- 79 usage_00541.pdb 57 RLQLEIGGLRGVKFAKLTKAS 77 L GVK KL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################