################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:13 2021 # Report_file: c_0728_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00099.pdb # 2: usage_00100.pdb # 3: usage_00143.pdb # 4: usage_00214.pdb # 5: usage_00216.pdb # 6: usage_00218.pdb # 7: usage_00220.pdb # # Length: 88 # Identity: 11/ 88 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 88 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 88 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00099.pdb 1 --EMLETDTFKLHCYQTLTGIKFVVLADP--------RQAGIDSLLRKIYEIYSDFALKN 50 usage_00100.pdb 1 ---VDKFNEWFVSAFVTAGHMRFIMLHDV----RQED---GIKNFFTDVYDLYIKF-AMN 49 usage_00143.pdb 1 GIEMLETDTFKLHCYQTLTGIKFVVLADP--------RQAGIDSLLRKIYEIYSDFALKN 52 usage_00214.pdb 1 --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD 54 usage_00216.pdb 1 --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD 54 usage_00218.pdb 1 --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD 54 usage_00220.pdb 1 --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD 54 l td f yqTltg kFv d lrk Y Ysd k usage_00099.pdb 51 PFYSLEMPIRCELFDQNLKLALEVAEKA 78 usage_00100.pdb 50 PFYEPNSPIRSSAFDRKVQFLGKK---- 73 usage_00143.pdb 53 PFYSLEMPIRCELFDQNLKLALEVA--- 77 usage_00214.pdb 55 PSYSMEMPIRSNLFDEKVKKMVENLQ-- 80 usage_00216.pdb 55 PSYSMEMPIRSNLFDEKVKKMVENLQ-- 80 usage_00218.pdb 55 PSYSMEMPIRSNLFDEKVKKMVENLQ-- 80 usage_00220.pdb 55 PSYSMEMPIRSNLFDEKVKKMVENLQ-- 80 P Ys emPIR lFD k e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################