################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:42 2021 # Report_file: c_0646_1.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00144.pdb # 2: usage_00310.pdb # 3: usage_00484.pdb # 4: usage_00485.pdb # # Length: 71 # Identity: 46/ 71 ( 64.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 71 ( 74.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 71 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00144.pdb 1 -SES----TVPGTNETVK-TFLPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAV 54 usage_00310.pdb 1 -SED----TIPGTNETVKTL-LPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAV 54 usage_00484.pdb 1 ----LSEDT------TVKTL-LPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAV 49 usage_00485.pdb 1 LSED----TIPGTNETVKTL-LPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAV 55 T TVK l LPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAV usage_00144.pdb 55 IAEGVRISP-- 63 usage_00310.pdb 55 IAEMGVRMISP 65 usage_00484.pdb 50 IAEGVRISP-- 58 usage_00485.pdb 56 IAEGVRISP-- 64 IAEgvrisp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################