################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:18 2021 # Report_file: c_0551_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00054.pdb # 4: usage_00055.pdb # 5: usage_00086.pdb # 6: usage_00145.pdb # 7: usage_00146.pdb # 8: usage_00147.pdb # 9: usage_00148.pdb # 10: usage_00186.pdb # # Length: 80 # Identity: 43/ 80 ( 53.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 80 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 80 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 ------SERMYPEDGALKSEIKKGLRLKDGGHYAAEVKTTYKAKKPVQLPGAYIVDIKLD 54 usage_00026.pdb 1 ------SERMYPEDGALKSEIKKGLRLKDGGHYAAEVKTTYKAKKPVQLPGAYIVDIKLD 54 usage_00054.pdb 1 ------TERLYPRDGVLKGEIHKALKLKGGGHYLCEFKSIYMAKKPVKLPGYYYVDSKLD 54 usage_00055.pdb 1 MGWEPSTERLYPRDGVLKGEIHKALKLKDGGHYLVEFKSIYMAKKPVQLPGYYYVDSKLD 60 usage_00086.pdb 1 MGWEASSERMYPEDGALKGEIKMRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYIVGIKLD 60 usage_00145.pdb 1 MGMEASSERMYPEDGALKGEDKLRLKLKDGGHYTSEVKTTYKAKKPVQLPGAYIVDIKLD 60 usage_00146.pdb 1 MGMEASSERMYPEDGALKGEDKLRLKLKDGGHYTSEVKTTYKAKKPVQLPGAYIVDIKLD 60 usage_00147.pdb 1 -----SSERMYPEDGALKGEIRMRLKLKDGGHYTSEVKTTYKAKKSVQLPGAYIVGIKLD 55 usage_00148.pdb 1 MGWEASSERMYPEDGALKGEIRMRLKLKDGGHYTSEVKTTYKAKKSVLLPGAYIVGIKLD 60 usage_00186.pdb 1 MGSEASSERMYPEDGALKGEIKLRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNANYKLD 60 ER YP DG LK E L LKdGGHY E K Y AKK V LPG Y v KLD usage_00025.pdb 55 IVSHNEDYTIVEQCERAEG- 73 usage_00026.pdb 55 IVSHNEDYTIVEQCERAEG- 73 usage_00054.pdb 55 ITSHNEDYTVVEQYERTEA- 73 usage_00055.pdb 61 ITSHNEDYTIVEQYERAEGR 80 usage_00086.pdb 61 ITSHNEDYTIVELYERAEG- 79 usage_00145.pdb 61 ITSHNEDYTIVEQYERAEG- 79 usage_00146.pdb 61 ITSHNEDYTIVEQYERAEG- 79 usage_00147.pdb 56 ITSHNEDYTIVEQYERAEGR 75 usage_00148.pdb 61 ITSHNEDYTIVEQYERSEA- 79 usage_00186.pdb 61 ITSHNEDYTIVEQYERCEG- 79 I SHNEDYTiVEq ER E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################