################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:35 2021 # Report_file: c_0952_195.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00322.pdb # 2: usage_00878.pdb # 3: usage_00879.pdb # 4: usage_01109.pdb # 5: usage_01687.pdb # # Length: 80 # Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 80 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/ 80 ( 87.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 ----------------PS-SKKGSPGQVL-D-----------VPLGHFD--GIEVRLNDA 29 usage_00878.pdb 1 ----MQTRVDS--AGT------------------TLFAHAVAADG--GG--VRLILVNT- 31 usage_00879.pdb 1 ----MQTRVDS--AGTTL-F-----AHAV-A-----------ADG--GG--VRLILVNT- 31 usage_01109.pdb 1 HQYPVFVANVDGQ---PKYI-----ALHGAGLWGPLWGYISVDSD--KNTIYGADFSHQ- 49 usage_01687.pdb 1 ----TV---------G------------------STSVVAVVF-P--SH--IFVANC--- 21 usage_00322.pdb 30 PRANEI-VAVAVT-----DS 43 usage_00878.pdb 32 -DANSGYDVAVDC-----S- 44 usage_00879.pdb 32 -DANSGYDVAVDC-----S- 44 usage_01109.pdb -------------------- usage_01687.pdb 22 --GDSRAVLCRGKTALPLS- 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################