################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1480_151.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00320.pdb # 2: usage_00721.pdb # 3: usage_00909.pdb # 4: usage_00972.pdb # 5: usage_01071.pdb # 6: usage_01293.pdb # 7: usage_01377.pdb # 8: usage_01734.pdb # 9: usage_01787.pdb # 10: usage_02706.pdb # 11: usage_03702.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 40 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 40 ( 62.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00320.pdb 1 --VSGMNG-D-NTDSQ-RLTLIISEIQALQEVVARFRQLR 35 usage_00721.pdb 1 -RNSAHSA-G-------VGAIFDRVLTELVSKMRDM--Q- 28 usage_00909.pdb 1 -RNSAHSA-G-------VGAIFDRVLT------------- 18 usage_00972.pdb 1 TRGQLKNG-G---LGVVSDAIFDLGMSLSS----FN---- 28 usage_01071.pdb 1 --NSAHSA-G-------VGAIFDRVLTELVSKMRDM--Q- 27 usage_01293.pdb 1 -RSSAHSA-G-------VGSIFDRVLTELVSKMKDM---- 27 usage_01377.pdb 1 -RNSALQA-G-------VGQIFDRVLSELSLKMRTL--R- 28 usage_01734.pdb 1 -RNSAHSA-G-------VGAIFDRVLTELVSKMRDM---- 27 usage_01787.pdb 1 -FTRMSNALQS---Q--GVAELLNEYLGEMTRAVFE--NQ 32 usage_02706.pdb 1 -VDDLH-S-G-------A-GDLLNSFEFSEKLNALQ---- 25 usage_03702.pdb 1 -RNSAHSA-G-------VGAIFDRVLTELVSKMRDM--Q- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################