################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:20 2021 # Report_file: c_1408_166.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00325.pdb # 2: usage_00899.pdb # 3: usage_00900.pdb # 4: usage_01063.pdb # 5: usage_01089.pdb # 6: usage_01090.pdb # # Length: 78 # Identity: 10/ 78 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 78 ( 24.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 78 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00325.pdb 1 LEDITLLRAEALCALN---RSTEAVSYLNI-RTNRGLREVSFKKDFGNNRES-------- 48 usage_00899.pdb 1 -SEAYLNAAEAAVQTG---DNAKAVKYLNSIVQRAN----------------PEN--SV- 37 usage_00900.pdb 1 -SEAYLNAAEAAVQTG---DNAKAVKYLNSIVQRAN----------------PEN--SV- 37 usage_01063.pdb 1 LSEVYLNAAEAGLKKGT-DI-EEAQGYLNDIISRRT----------------TDTSQQVS 42 usage_01089.pdb 1 --EVYLIAAEAGCKLGGDAA-VQGLGYLNEIVKRGN----------------PDN--EV- 38 usage_01090.pdb 1 -SEVYLIAAEAGCKLGGDAA-VQGLGYLNEIVKRGN----------------PDN--EV- 39 e yL aAEA g YLN r usage_00325.pdb 49 -----LIAEIFEERRREL 61 usage_00899.pdb 38 EGKTLTLENVLDERRKE- 54 usage_00900.pdb 38 EGKTLTLENVLDERRKE- 54 usage_01063.pdb 43 TETF-TLDRILKERRKE- 58 usage_01089.pdb 39 TADY-TLDRVLDERSKE- 54 usage_01090.pdb 40 TADY-TLDRVLDERSKE- 55 tl l ER kE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################