################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:55 2021 # Report_file: c_1208_50.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00342.pdb # 2: usage_01218.pdb # 3: usage_01219.pdb # 4: usage_01220.pdb # 5: usage_01221.pdb # 6: usage_01222.pdb # 7: usage_01800.pdb # 8: usage_02308.pdb # 9: usage_02309.pdb # # Length: 40 # Identity: 4/ 40 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 40 ( 42.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 40 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 NGSQGV-------WGPIPMPPNA-VSDDEAQTLAKWILS- 31 usage_01218.pdb 1 -GSSGV-------WGQIPMPPNVNVSDADAKALADWILTL 32 usage_01219.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 usage_01220.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 usage_01221.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 usage_01222.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 usage_01800.pdb 1 ------ILVGCGGQFSVSGG-VK-LSDEDAEKRADEMDDL 32 usage_02308.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 usage_02309.pdb 1 -GSSGV-------WGQIPMPPVN-VSDADAKALADWILTL 31 wg ipmp vSD dA lAdwil #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################