################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:30 2021 # Report_file: c_0194_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00081.pdb # 2: usage_00082.pdb # 3: usage_00642.pdb # 4: usage_00643.pdb # 5: usage_00644.pdb # # Length: 255 # Identity: 119/255 ( 46.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 119/255 ( 46.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 73/255 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 KAMIEKVREMGFNAVRVPVTWDTHIGPAPDYKIDEAWLNRVEEVVNYVLDCGMYAIINLH 60 usage_00082.pdb 1 KAMIEKVREMGFNAVRVPVTWDTHIGPAPDYKIDEAWLNRVEEVVNYVLDCGMYAIINLH 60 usage_00642.pdb 1 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLH 60 usage_00643.pdb 1 -----------------------------------TWMKRVEEIANYAFDNDMYVIINLH 25 usage_00644.pdb 1 ---------------------------------DQTWMKRVEEIANYAFDNDMYVIINLH 27 W RVEE NY D MY IINLH usage_00081.pdb 61 HDNTWIIPTYANEQRSKEKLVKVWEQIATRFKDYDDHLLFETMNEPREVGSPMEWMGGTY 120 usage_00082.pdb 61 HDNTWIIPTYANEQRSKEKLVKVWEQIATRFKDYDDHLLFETMNEPREVGSPMEWMGGTY 120 usage_00642.pdb 61 HENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSY 120 usage_00643.pdb 26 HENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSY 85 usage_00644.pdb 28 HENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSY 87 H N W P YANE K L KVW QIA FK Y DHL FETMNEPR VG W GG Y usage_00081.pdb 121 ENRDVINRFNLAVVNTIRASGGNNDKRFILVPTNAATGLDVALNDLVIPNNDSRVIVSIH 180 usage_00082.pdb 121 ENRDVINRFNLAVVNTIRASGGNNDKRFILVPTNAATGLDVALNDLVIPNNDSRVIVSIH 180 usage_00642.pdb 121 ENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLH 180 usage_00643.pdb 86 ENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLH 145 usage_00644.pdb 88 ENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLH 147 ENR V NR NL VN IRA GGNN R I VPT AA NDLVIPNNDS VIVS H usage_00081.pdb 181 AYSPYFFAMDVNGTSYWGSDYDKASLTSELDAIYNRFVKNG------------------- 221 usage_00082.pdb 181 AYSPYFFAMDVNGTSYWGSDYDKASLTSELDAIYNRFVKNG------------------- 221 usage_00642.pdb 181 MYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKF----------------------- 217 usage_00643.pdb 146 MYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTAAR 205 usage_00644.pdb 148 MYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTAAR 207 YSPYFFAMD NGTS WGSDYDK SL SE DA YN F usage_00081.pdb --------------- usage_00082.pdb --------------- usage_00642.pdb --------------- usage_00643.pdb 206 VTHAEYYAKSAKARG 220 usage_00644.pdb 208 VTHAEYYAKSAKARG 222 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################