################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:49 2021 # Report_file: c_1105_60.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00075.pdb # 2: usage_00251.pdb # 3: usage_00252.pdb # 4: usage_00539.pdb # 5: usage_00540.pdb # # Length: 89 # Identity: 16/ 89 ( 18.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 89 ( 29.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 89 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 FLIVALIAKWFGPWWGMLTAAVVDVIGTLMTG--GPFFIGFTVSAVLGSLIYAVFLYRQP 58 usage_00251.pdb 1 --PESLIGMIFGPFWAGIGTAVADVVGMLLFP-KAGYFPGFTLNAFLAGAIYGYFYYKKE 57 usage_00252.pdb 1 -IPESLIGMIFGPFWAGIGTAVADVVGMLLFP-KA-F-PGFTLNAFLAGAIYGYFY-MTW 55 usage_00539.pdb 1 FIGSVMLGYLFGPWWGFAGGALSDLVSSVIFGNLGGFFIGFTLTAALGPMIYGFFLYKQP 60 usage_00540.pdb 1 FIGSVMLGYLFGPWWGFAGGALSDLVSSVIFGNLGGFFIGFTLTAALGPMIYGFFLYKQP 60 g FGP W g A D v f f GFTl A L IYg F usage_00075.pdb 59 -VSWWRVIGASVLIALLVNTLLNTLWVT- 85 usage_00251.pdb 58 -MTWQRVILATLLVTVLINIILTPLWLSL 85 usage_00252.pdb 56 QR----VILATLLVTV------------- 67 usage_00539.pdb 61 -IQIWRVIASVICVTVICNIGLNTLWVSM 88 usage_00540.pdb 61 -IQIWRVIASVICVTVICNIGLNTLWVS- 87 VI vtv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################