################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:43 2021 # Report_file: c_0929_36.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00046.pdb # 2: usage_00208.pdb # 3: usage_00537.pdb # 4: usage_00682.pdb # 5: usage_00781.pdb # 6: usage_01162.pdb # 7: usage_01163.pdb # 8: usage_01361.pdb # 9: usage_01362.pdb # 10: usage_01363.pdb # 11: usage_01364.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 62 ( 8.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 62 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 DLQDTKYVVYESVENNES--DTFVKHPIKTGLNGKKY--------VETTNDDYWKDFVE- 49 usage_00208.pdb 1 GKYNIAFTVWKGDKDESSRMNRYFESPATLTV-----KNGKQYVSFKVKDSTSIKSFQVE 55 usage_00537.pdb 1 DLQEAHFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIVE 55 usage_00682.pdb 1 ----LNYEVYKYNTNDTSIANDYFNKPAKYIK-----KNGKLYVQITVNHSHWITGMSIE 51 usage_00781.pdb 1 -----HFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIVE 50 usage_01162.pdb 1 DLQEAHFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIVE 55 usage_01163.pdb 1 DLQEAHFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIVE 55 usage_01361.pdb 1 -----HFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIV- 49 usage_01362.pdb 1 -----HFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIV- 49 usage_01363.pdb 1 DLQEAHFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIVE 55 usage_01364.pdb 1 -----HFVVFESEENSESVMDGFVEHPFYTAT-----LNGQKYVVMKTKDDSYWKDLIV- 49 V n S P k usage_00046.pdb -- usage_00208.pdb 56 KD 57 usage_00537.pdb -- usage_00682.pdb -- usage_00781.pdb -- usage_01162.pdb -- usage_01163.pdb -- usage_01361.pdb -- usage_01362.pdb -- usage_01363.pdb -- usage_01364.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################