################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:56 2021 # Report_file: c_1222_120.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00242.pdb # 2: usage_00243.pdb # 3: usage_00667.pdb # 4: usage_01078.pdb # 5: usage_01819.pdb # 6: usage_01820.pdb # 7: usage_01941.pdb # 8: usage_01985.pdb # 9: usage_02345.pdb # # Length: 28 # Identity: 3/ 28 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 28 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 28 ( 32.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00242.pdb 1 -ATVENPFGQPPIHGREQIAAFYRQG-- 25 usage_00243.pdb 1 -ATVENPFGQPPIHGREQIAAFYRQG-- 25 usage_00667.pdb 1 -ATVENPFGQPPIHGREQIAAFFRQG-- 25 usage_01078.pdb 1 -ATVEDPFGQPPIHGREQIAAFSRQG-- 25 usage_01819.pdb 1 -ATVENPFGQPPIHGREQIAAFYRQGLG 27 usage_01820.pdb 1 -ATVENPFGQPPIHGREQIAAFYRQGLG 27 usage_01941.pdb 1 -ARLVDPLGTEPVVGRAALAAR------ 21 usage_01985.pdb 1 GEIIAPV--GRVYRGWDAIAAFIEAA-- 24 usage_02345.pdb 1 -ATVENPFGQPPIHGREQIAAFYRQG-- 25 a p p Gr iAAf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################