################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:15:59 2021 # Report_file: c_0767_32.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00085.pdb # 2: usage_00133.pdb # 3: usage_00181.pdb # 4: usage_00217.pdb # 5: usage_00218.pdb # 6: usage_00219.pdb # 7: usage_00223.pdb # 8: usage_00230.pdb # 9: usage_00369.pdb # 10: usage_00374.pdb # 11: usage_00375.pdb # 12: usage_00378.pdb # 13: usage_00379.pdb # 14: usage_00439.pdb # 15: usage_00440.pdb # 16: usage_00449.pdb # 17: usage_00450.pdb # 18: usage_00518.pdb # 19: usage_00546.pdb # # Length: 66 # Identity: 3/ 66 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 66 ( 6.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 66 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPAKMIKPFFHSLSEK--YSN-V 52 usage_00133.pdb 1 --AVEEVGSAGQFEELLR-LK--AKSLLVVHFWAPWAPQCAQMNEVMAELAKE--LPQ-V 52 usage_00181.pdb 1 ---VISVHSLEQWTMQIE-EANTAKKLVVIDFTASWCGPCRIMAPVFADLAKK--FPN-A 53 usage_00217.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEK--YSN-V 52 usage_00218.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEK--YSN-V 52 usage_00219.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEK--YSN-V 52 usage_00223.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEK--YSN-V 52 usage_00230.pdb 1 --MVTQFKTASEFDSAIA-QD----KLVVVDFYATWCGPCKMIAPMIEKFSEQ--YPQ-A 50 usage_00369.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEK--YSN-V 52 usage_00374.pdb 1 --MVYQVKDKADLDGQLT-KA--SGKLVVLDFFATWCGPCKMISPKLVELSTQ--FADNV 53 usage_00375.pdb 1 ---VYQVKDKADLDGQLT-KA--SGKLVVLDFFATWCGPCKMISPKLVELSTQ--FADNV 52 usage_00378.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPAKMIKPFFHSLSEK--YSN-V 52 usage_00379.pdb 1 --MVKQIESKTAFQEALD-AA--GDKLVVVDFSATWCGPAKMIKPFFHSLSEK--YSN-V 52 usage_00439.pdb 1 --NVHLITTKERWDQKLS-EASRDGKIVLANFSARWCGPCKQIAPYYIELSEN--YPS-L 54 usage_00440.pdb 1 --NVHLITTKERWDQKLS-EASRDGKIVLANFSARWCGPCKQIAPYYIELSEN--YPS-L 54 usage_00449.pdb 1 --PVIEINDQEQFTYLTTTAA--GDKLIVLYFHTSW--PCKALKQVFEAISNEPSNSN-V 53 usage_00450.pdb 1 --PVIEINDQEQFTYLTTTAA--GDKLIVLYFHTSW-----ALKQVFEAISNEPSNSN-V 50 usage_00518.pdb 1 EGQVIACHTVDTWKEHFE-KGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKK--FPN-V 56 usage_00546.pdb 1 ---VIACHNKDEFDAQMT-KAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKK--FPG-A 53 V k F W usage_00085.pdb 53 IFLEVD 58 usage_00133.pdb 53 SFVKLE 58 usage_00181.pdb 54 VFLKVD 59 usage_00217.pdb 53 IFLEVD 58 usage_00218.pdb 53 IFLEVD 58 usage_00219.pdb 53 IFLEVD 58 usage_00223.pdb 53 IFLEVD 58 usage_00230.pdb 51 DFYK-- 54 usage_00369.pdb 53 IFLEVD 58 usage_00374.pdb 54 VVLK-- 57 usage_00375.pdb 53 VVLKVD 58 usage_00378.pdb 53 IFLEVD 58 usage_00379.pdb 53 IFLEVD 58 usage_00439.pdb 55 MFLVID 60 usage_00440.pdb 55 MFLVID 60 usage_00449.pdb 54 SFLSID 59 usage_00450.pdb 51 SFLSID 56 usage_00518.pdb 57 TFLKVD 62 usage_00546.pdb 54 VFLK-- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################