################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:34:33 2021 # Report_file: c_0394_2.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00029.pdb # 2: usage_00030.pdb # 3: usage_00031.pdb # 4: usage_00032.pdb # 5: usage_00033.pdb # 6: usage_00054.pdb # 7: usage_00055.pdb # 8: usage_00077.pdb # 9: usage_00090.pdb # 10: usage_00118.pdb # 11: usage_00119.pdb # 12: usage_00128.pdb # 13: usage_00129.pdb # 14: usage_00131.pdb # 15: usage_00132.pdb # 16: usage_00133.pdb # 17: usage_00134.pdb # 18: usage_00165.pdb # 19: usage_00166.pdb # 20: usage_00171.pdb # 21: usage_00172.pdb # # Length: 87 # Identity: 43/ 87 ( 49.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 87 ( 51.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 87 ( 8.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 LGWEASTEMLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00030.pdb 1 LGWEASTEMLYPA--GLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 58 usage_00031.pdb 1 LGWEACTEMLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00032.pdb 1 LGWEACTEMLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00033.pdb 1 LGWEACTEMLYPA--GLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 58 usage_00054.pdb 1 KGWEPNTEMMYPADGGLRGYTHMALKVDGGGHLSCSFVTTYRSKKTVGNIKMPGIHAVSH 60 usage_00055.pdb 1 KGWEPNTEMMYPADGGLRGYTHMALKVDGGGHLSCSFVTTYRSKKTVGNIKMPGIHAVSH 60 usage_00077.pdb 1 LGWEASTEMLYPADGGLEGRCDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYFVDR 60 usage_00090.pdb 1 LGWEATTETLYPADGGLEGRCDMALKLDGGGHLHCNLKTTYRSKKPAGNLKMPGVYFVDR 60 usage_00118.pdb 1 LGWEANTEMLYPADGGLEGRSDMALKLVGGGHLICNFKTTYRSKKPAKNLKMPGVYYVDH 60 usage_00119.pdb 1 LGWEANTEMLYPADGGLEGRSDMALKLVGGGHLICNFKTTYRSKKPAKNLKMPGVYYVDH 60 usage_00128.pdb 1 LGWEASTEMLYPADGGLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00129.pdb 1 LGWEASTEMLYPADGGLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00131.pdb 1 LGWEAGTEMLYPADGGLEGRSDDALKLVGGGHLICNLKSTYRSKKPAKNLKVPGVYYVDR 60 usage_00132.pdb 1 LGWEAGTEMLYPADGGLEGRSDDALKLVGGGHLICNLKSTYRSKKPAKNLKVPGVYYVDR 60 usage_00133.pdb 1 LGWEAGTEMLYPADGGLEGRSDDALKLVGGGHLICNLKSTYRSKKPAKNLKVPGVYYVDR 60 usage_00134.pdb 1 LGWEAGTEMLYPADGGLEGRSDDALKLVGGGHLICNLKSTYRSKKPAKNLKVPGVYYVDR 60 usage_00165.pdb 1 LGWEACTEMLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00166.pdb 1 LGWEACTEMLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00171.pdb 1 LGWEASTEMLYPADGGLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 usage_00172.pdb 1 LGWEASTEMLYPADGGLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDR 60 GWE TEm YPA GL G ALK GGGHL C TYRSKK N K PG V usage_00029.pdb 61 RLERIKEADKETYVEQHEVAVAR---- 83 usage_00030.pdb 59 RLERIKEADKETYVEQHEVAVA----- 80 usage_00031.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00032.pdb 61 RLERIKEADKETYVEQHEVAVAR---- 83 usage_00033.pdb 59 RLERIKEADKETYVEQHEVAVA----- 80 usage_00054.pdb 61 RLERLEESDNEMFVVQREHAVA----- 82 usage_00055.pdb 61 RLERLEESDNEMFVVQREHAVA----- 82 usage_00077.pdb 61 RLERIKEADNETYVEQHEVAVA----- 82 usage_00090.pdb 61 RLERIKEADNETYVEQHEVAEA----- 82 usage_00118.pdb 61 RLERIKEADKETYVEQHEVAVARYCDL 87 usage_00119.pdb 61 RLERIKEADKETYVEQHEVAVAR---- 83 usage_00128.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00129.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00131.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00132.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00133.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00134.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00165.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00166.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 usage_00171.pdb 61 RLERIKEADKETYVEQHEVAVAR---- 83 usage_00172.pdb 61 RLERIKEADKETYVEQHEVAVA----- 82 RLER E D E V Q E AvA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################