################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:02 2021 # Report_file: c_0141_23.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00032.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00049.pdb # # Length: 155 # Identity: 29/155 ( 18.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 125/155 ( 80.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/155 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 -LKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVA 59 usage_00033.pdb 1 NLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVA 60 usage_00034.pdb 1 -LKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVA 59 usage_00049.pdb 1 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFES 60 LkgAitaavsVgneVDvIEaGTvcLlqvGselvevlrslfPdKiivADtKcaDaGgtva usage_00032.pdb 60 KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYG-DW-TYDQAQQWLDA 117 usage_00033.pdb 61 KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYG-DW-TYDQAQQWLDA 118 usage_00034.pdb 60 KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYG-DW-TYDQAQQWLDA 117 usage_00049.pdb 61 QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG---KQVVVDMICVD-DLPARVRLLEEA 116 knnavrGADwmTcicsatipTmkaarkAiedin geiqVelyg D tydqaqqwldA usage_00032.pdb 118 GISQAIYHQSRGE--------KDLNKVKKLIEM-- 142 usage_00033.pdb 119 GISQAIYHQSRTW--------GEKDLNKVKKLIEM 145 usage_00034.pdb 118 GISQAIYHQSRGE--------KDLNKVKKLIEMG- 143 usage_00049.pdb 117 GADMLAVHTG---TDQQAAGRKPIDDLITMLKV-- 146 GisqaiyHqs k k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################