################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:29:04 2021 # Report_file: c_0021_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00020.pdb # 2: usage_00038.pdb # 3: usage_00077.pdb # 4: usage_00098.pdb # 5: usage_00139.pdb # 6: usage_00191.pdb # 7: usage_00226.pdb # 8: usage_00255.pdb # 9: usage_00256.pdb # 10: usage_00260.pdb # 11: usage_00263.pdb # # Length: 297 # Identity: 59/297 ( 19.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/297 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 78/297 ( 26.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 --GLGTWRAG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEA--GIDRKD 55 usage_00038.pdb 1 --GLGTWKSEPGQVKAAIKYALT-VGYRHIDCAAIYGNELEIGEALQETVGPGKAVPREE 57 usage_00077.pdb 1 --GLGTWKSEPGQVKAAIKYALT-VGYRHIDCAAIYGNELEIGEALQETVGPGKAVPREE 57 usage_00098.pdb 1 --GLGTWRAG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEA--GIDRKD 55 usage_00139.pdb 1 --GLGTWKSEPGQVKAAIKYALT-VGYRHIDCAAIFGNELEIGEALQETVGPGKAVPREE 57 usage_00191.pdb 1 --GFGCWKLANATAGEQVYQAIK-AGYRLFDGAEDYGNEKEVGDGVKRAIDE-GLVKREE 56 usage_00226.pdb 1 LIGLGTWKSEPGQVKAAIKYALT-VGYRHIDCAAIYGNELEIGEALQETVGPGKAVPREE 59 usage_00255.pdb 1 --GLGSWQSDPGVVGNAVYAAVK-AGYRHIDCARVYGNEKEIGLALKKLFEE-GVVKRED 56 usage_00256.pdb 1 --GLGSWQSDPGVVGNAVYAAVK-AGYRHIDCARVYGNEKEIGLALKKLFEE-GVVKRED 56 usage_00260.pdb 1 --GLGTWKSEPGQVKAAIKHALS-AGYRHIDCASVYGNETEIGEALKESVGSGKAVPREE 57 usage_00263.pdb 1 LIGLGTWKSEPGQVKAAVKYALS-VGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREE 59 GlG W A GYRh D A yG E E G l R usage_00020.pdb 56 LFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGA----HMPP---E 108 usage_00038.pdb 58 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 110 usage_00077.pdb 58 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 110 usage_00098.pdb 56 LFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGA----HMPP---E 108 usage_00139.pdb 58 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 110 usage_00191.pdb 57 IFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFV-PIEEKYPPGFYC 115 usage_00226.pdb 60 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 112 usage_00255.pdb 57 MFITSKLWND---PEDVPEALNDSLNDLQLEYLDLYLIHW-------------------- 93 usage_00256.pdb 57 MFITSKLWNDHHAPEDVPEALNDSLNDLQLEYLDLYLIHW-------------------- 96 usage_00260.pdb 58 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 110 usage_00263.pdb 60 LFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-D---NPFP---K 112 F TSK W Pe V AL L DLql Y DLy Hw usage_00020.pdb 109 A-G---EVLEFD-M-EGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQM 162 usage_00038.pdb 111 NADGTIRYDATH-Y-KDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQV 168 usage_00077.pdb 111 NADGTIRYDATH-Y-KDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQV 168 usage_00098.pdb 109 A-G---EVLEFD-M-EGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQM 162 usage_00139.pdb 111 NADGTIRYDATH-Y-KDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQV 168 usage_00191.pdb 116 GDGNNFVYEDVP-I-LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQV 173 usage_00226.pdb 113 NADGTIRYDATH-Y-KDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQV 170 usage_00255.pdb 94 ------------PF-PATWGAMEKLYDAGKARAIGVSNFSSKKLGDLLAVARVPPAVDQV 140 usage_00256.pdb 97 ------------PFFPATWGAMEKLYDAGKARAIGVSNFSSKKLGDLLAVARVPPAVDQV 144 usage_00260.pdb 111 ---GTVRYDSTH-Y-KETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQV 165 usage_00263.pdb 113 NADGTICYDSTH-Y-KETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQV 170 W E L G G N L A PAV Q usage_00020.pdb 163 EMHPGWKNDKIFEACKKHGIHITAYSPLGS----S--------------EKNLAHDPVVE 204 usage_00038.pdb 169 ECHPYLAQNELIAHCQARGLEVTAYSPLGS----SDRAWR---DPN---EPVLLEEPVVQ 218 usage_00077.pdb 169 ECHPYLAQNELIAHCQARGLEVTAYSPLGS----SDRAWR---DPN---EPVLLEEPVVQ 218 usage_00098.pdb 163 EMHPGWKNDKIFEACKKHGIHITAYSPLGS----S--------------EKNLAHDPVVE 204 usage_00139.pdb 169 ECHPYLAQNELIAHCQARGLEVTAYSPLGS----SDRAWR---DPN---EPVLLEEPVVQ 218 usage_00191.pdb 174 EHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEMN---QGRALN---TPTLFAHDTIK 227 usage_00226.pdb 171 ECHPYLAQNELIAHCQARGLEVTAYSPLGS----SDRAWR---DPN---EPVLLEEPVVQ 220 usage_00255.pdb 141 ECHPGWQQTKLHSFCQSTGVHLTAYSPLGS----P-G---T-----TWMNGNVLKEPIII 187 usage_00256.pdb 145 ECHPGWQQTKLHSFCQSTGVHLTAYSPLG----------------------NVLKEPIII 182 usage_00260.pdb 166 ECHPYLAQNELIAHCHARGLEVTAYSPLG---------------PD---EPVLLEEPVVL 207 usage_00263.pdb 171 ECHPYLAQNELIAHCQARGLEVTAYSPLG----------------------VLLEEPVVL 208 E HP c G TAYSplG p usage_00020.pdb 205 KVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCS- 260 usage_00038.pdb 219 ALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQVFDFTFSPEEMKQLDAL 275 usage_00077.pdb 219 ALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQVFDFTFSPEEMKQLDA- 274 usage_00098.pdb 205 KVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCS- 260 usage_00139.pdb 219 ALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFDFTFSPEEMKQLDA- 274 usage_00191.pdb 228 AIAAKYNKTPAEVLLRWAAQRGIAVIPRSNLPERLVQNRSFNTF------------- 271 usage_00226.pdb 221 ALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQVFDFTFSPEEMKQLDA- 276 usage_00255.pdb 188 SIAEKLGKTSAQVALRWNIQMGHSVLPKSTNEERIKQNLDVYDWSIPDDLLAKFSE- 243 usage_00256.pdb 183 SIAEKLGKTSAQVALRWNIQMGHSVLPKSTNEERIKQNLDVYDWSIPDDLLAKFSEI 239 usage_00260.pdb 208 ALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDA- 263 usage_00263.pdb 209 ALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNA- 264 A K q W Q PkS Ri N v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################