################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:50 2021 # Report_file: c_0985_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00605.pdb # 2: usage_00606.pdb # 3: usage_00668.pdb # 4: usage_00669.pdb # 5: usage_00670.pdb # # Length: 70 # Identity: 62/ 70 ( 88.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 70 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 70 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00605.pdb 1 TKDNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA--- 57 usage_00606.pdb 1 -KDNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSR 59 usage_00668.pdb 1 --DNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA--- 55 usage_00669.pdb 1 --DNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA--- 55 usage_00670.pdb 1 --DNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEK---- 54 DNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEK usage_00605.pdb 58 --SIPLVLCA 65 usage_00606.pdb 60 PNSIPLVLCA 69 usage_00668.pdb 56 --SIPLVLCA 63 usage_00669.pdb 56 --SIPLVLCA 63 usage_00670.pdb 55 --SIPLVLCA 62 SIPLVLCA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################