################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:16 2021 # Report_file: c_1481_89.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00073.pdb # 2: usage_00074.pdb # 3: usage_00222.pdb # 4: usage_00413.pdb # 5: usage_00851.pdb # 6: usage_01051.pdb # 7: usage_01052.pdb # 8: usage_01053.pdb # 9: usage_01054.pdb # 10: usage_02985.pdb # 11: usage_03068.pdb # 12: usage_03069.pdb # # Length: 29 # Identity: 24/ 29 ( 82.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 29 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 29 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 -ESEISQEADDMAMEKGKYVGELRKALLS 28 usage_00074.pdb 1 SESEISQEADDMAMEKGKYVGELRKA--- 26 usage_00222.pdb 1 SESEISQEADDMAMEKGKYVGELRKA--- 26 usage_00413.pdb 1 -ESEISQEADDMAMEKGKYVGELRKALLS 28 usage_00851.pdb 1 SESEISQEADDMAMEKGKYVGELRKALLS 29 usage_01051.pdb 1 SESEISQEADDMEMEKGKYVGELRKA--- 26 usage_01052.pdb 1 SESEISQEADDMEMEKGKYVGELRKA--- 26 usage_01053.pdb 1 SESEISQEADDMEMEKGKYVGELRKA--- 26 usage_01054.pdb 1 SESEISQEADDMEMEKGKYVGELRKAL-- 27 usage_02985.pdb 1 SESEISQEADDMAMEKGKYVGELRKA--- 26 usage_03068.pdb 1 SESEISQEADDMAMEKGKYVGELRKALL- 28 usage_03069.pdb 1 SESEISQEADDMAMEKGKYVGELRKALL- 28 ESEISQEADDM MEKGKYVGELRKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################