################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:32 2021 # Report_file: c_0545_23.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00254.pdb # 2: usage_00255.pdb # 3: usage_00646.pdb # 4: usage_00647.pdb # 5: usage_00690.pdb # 6: usage_00691.pdb # 7: usage_00692.pdb # 8: usage_00693.pdb # 9: usage_00936.pdb # 10: usage_00937.pdb # 11: usage_00968.pdb # 12: usage_00969.pdb # # Length: 161 # Identity: 126/161 ( 78.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 126/161 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/161 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00254.pdb 1 -GEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLG----VSRLLR 55 usage_00255.pdb 1 -E-ARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 58 usage_00646.pdb 1 ----RLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 56 usage_00647.pdb 1 -GEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 59 usage_00690.pdb 1 AGEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 60 usage_00691.pdb 1 ----RLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 56 usage_00692.pdb 1 --EARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 58 usage_00693.pdb 1 -GEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 59 usage_00936.pdb 1 ------EEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 54 usage_00937.pdb 1 ------EEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 54 usage_00968.pdb 1 -GEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 59 usage_00969.pdb 1 -GEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR 59 EEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLG VSRLLR usage_00254.pdb 56 VMQCLSRIEEGENL--SFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 113 usage_00255.pdb 59 VMQCLSRIEEGEN---SFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 115 usage_00646.pdb 57 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 116 usage_00647.pdb 60 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 119 usage_00690.pdb 61 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 120 usage_00691.pdb 57 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 116 usage_00692.pdb 59 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 118 usage_00693.pdb 60 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 119 usage_00936.pdb 55 VMQCLSRIEEGENLDCSFDME-ELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 113 usage_00937.pdb 55 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 114 usage_00968.pdb 60 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 119 usage_00969.pdb 60 VMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV 119 VMQCLSRIEEGEN SFDME ELTPLESAINVLEMIKTEFTLTEAVVESSRKLVKEAAV usage_00254.pdb 114 IICIKNKEFEKASKILKKHM------R-NDLLNIIREKNL- 146 usage_00255.pdb 116 IICIKNKEFEKASKILKKHM------R-NDLLNIIRE---- 145 usage_00646.pdb 117 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIRE- 155 usage_00647.pdb 120 IICIKNKEFEKASKILKKHMSKDPT-TQ------------- 146 usage_00690.pdb 121 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIREK 160 usage_00691.pdb 117 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIR-- 154 usage_00692.pdb 119 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIRE- 157 usage_00693.pdb 120 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIRE- 158 usage_00936.pdb 114 IICIKNKEFEKASKILKKHMP-TT--Q-KL----------- 139 usage_00937.pdb 115 IICIKNKEFEKASKILKKHMSPTTQKL-RNDLLNIIR---- 150 usage_00968.pdb 120 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIRE- 158 usage_00969.pdb 120 IICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIRE- 158 IICIKNKEFEKASKILKKHM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################