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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:09:31 2021
# Report_file: c_0775_42.html
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#====================================
# Aligned_structures: 9
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00006.pdb
#   4: usage_00007.pdb
#   5: usage_00013.pdb
#   6: usage_00014.pdb
#   7: usage_00029.pdb
#   8: usage_00030.pdb
#   9: usage_00547.pdb
#
# Length:         67
# Identity:       28/ 67 ( 41.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     28/ 67 ( 41.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/ 67 ( 19.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  -NILIINGA-------KGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   52
usage_00005.pdb         1  -NILIINGA------N-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   52
usage_00006.pdb         1  SNILIINGA-------K-QLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   52
usage_00007.pdb         1  -NILIINGA-------K---NDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   49
usage_00013.pdb         1  -NVLIINAMKEFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA   58
usage_00014.pdb         1  -NVLIINAMKEFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA   58
usage_00029.pdb         1  -NILIINGAKKFAHSN-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   58
usage_00030.pdb         1  -NILIINGAKKFAHSN-GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA   58
usage_00547.pdb         1  -NVLIINAK-EFAHSK-GALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWA   57
                            N LIIN             N TLT VA   LR  GH V I   D  YD   E  N LWA

usage_00004.pdb        53  DVVIWQ-   58
usage_00005.pdb        53  DVVIWQ-   58
usage_00006.pdb        53  DVVIWQ-   58
usage_00007.pdb        50  DVVIWQ-   55
usage_00013.pdb        59  DTIIYQM   65
usage_00014.pdb        59  DTIIYQM   65
usage_00029.pdb        59  DVVIWQM   65
usage_00030.pdb        59  DVVIWQM   65
usage_00547.pdb        58  DTIIYQ-   63
                           D  I Q 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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