################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:43 2021 # Report_file: c_0190_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00015.pdb # 2: usage_00026.pdb # 3: usage_00027.pdb # 4: usage_00031.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00044.pdb # 8: usage_00045.pdb # 9: usage_00046.pdb # 10: usage_00087.pdb # # Length: 189 # Identity: 136/189 ( 72.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 136/189 ( 72.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/189 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00026.pdb 1 -EPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIF 59 usage_00027.pdb 1 -EPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIF 59 usage_00031.pdb 1 HEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00041.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00042.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00044.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00045.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00046.pdb 1 HEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIF 60 usage_00087.pdb 1 HEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIF 60 EPAVLHNL RF SKLIYTY GI LVA NPY QLPIYG II AYSGQNMGDMDPHIF usage_00015.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATV-S-----NVEEKVLASN 114 usage_00026.pdb 60 AVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSGS--HVEDKVLASN 117 usage_00027.pdb 60 AVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSGSNAHVEDKVLASN 119 usage_00031.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATV-S-----NVEEKVLASN 114 usage_00041.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASN 120 usage_00042.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASN 120 usage_00044.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATV-S-----NVEEKVLASN 114 usage_00045.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATV-S-----NVEEKVLASN 114 usage_00046.pdb 61 AVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGS---ANVEEKVLASN 117 usage_00087.pdb 61 AVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKS---AHVEDKVLASN 117 AVAEEAYKQMAR RNQSIIVSGESGAGKTVSA YAMRYFATV VE KVLASN usage_00015.pdb 115 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYH 174 usage_00026.pdb 118 PITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVV---------- 167 usage_00027.pdb 120 PITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVVFQSENERNYH 179 usage_00031.pdb 115 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYH 174 usage_00041.pdb 121 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYH 180 usage_00042.pdb 121 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV---------- 170 usage_00044.pdb 115 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV---------- 164 usage_00045.pdb 115 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV---------- 164 usage_00046.pdb 118 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYH 177 usage_00087.pdb 118 PITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVV---------- 167 PI E GNAKTTRNDNSSRFGKY EI FD IIGANM TYLLEKSRVV usage_00015.pdb 175 IFYQLCASA 183 usage_00026.pdb --------- usage_00027.pdb 180 IFYQLCASA 188 usage_00031.pdb 175 IFYQLCASA 183 usage_00041.pdb 181 IFYQLCASA 189 usage_00042.pdb --------- usage_00044.pdb --------- usage_00045.pdb --------- usage_00046.pdb 178 IFYQLCASA 186 usage_00087.pdb --------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################