################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:05 2021 # Report_file: c_0740_76.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00164.pdb # 2: usage_00169.pdb # 3: usage_00261.pdb # 4: usage_00489.pdb # 5: usage_00691.pdb # 6: usage_00715.pdb # 7: usage_00716.pdb # # Length: 63 # Identity: 17/ 63 ( 27.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 63 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 63 ( 15.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00164.pdb 1 GEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 58 usage_00169.pdb 1 GEVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 58 usage_00261.pdb 1 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 60 usage_00489.pdb 1 -EVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 57 usage_00691.pdb 1 GEVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 58 usage_00715.pdb 1 GVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 59 usage_00716.pdb 1 GVVKYGKWR-GQYDVAIKMI-------DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 52 V G w g VA K F EA vM l H LVqLy V Pi I usage_00164.pdb 59 ITE 61 usage_00169.pdb 59 VTE 61 usage_00261.pdb 61 ITE 63 usage_00489.pdb 58 VTE 60 usage_00691.pdb 59 VIE 61 usage_00715.pdb 60 ITE 62 usage_00716.pdb 53 ITE 55 tE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################