################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:24 2021 # Report_file: c_0796_10.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00046.pdb # 7: usage_00088.pdb # 8: usage_00089.pdb # 9: usage_00114.pdb # 10: usage_00128.pdb # 11: usage_00129.pdb # 12: usage_00130.pdb # 13: usage_00143.pdb # 14: usage_00144.pdb # 15: usage_00145.pdb # 16: usage_00204.pdb # # Length: 65 # Identity: 40/ 65 ( 61.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 65 ( 61.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 65 ( 36.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQST-------NG-GNVLQ 50 usage_00034.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQS--------NG-GNVLQ 51 usage_00035.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQS--------NG-GNVLQ 51 usage_00036.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQS--------NG-GNVLQ 51 usage_00037.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQS--------NG-GNVLQ 51 usage_00046.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN----ELTMEQKNG-GNVLQ 53 usage_00088.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCN-----------NG-GNVLQ 46 usage_00089.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCN-----------NG-GNVLQ 46 usage_00114.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-----------V---NVLQ 44 usage_00128.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS-------TMEQKNG-GNVLQ 52 usage_00129.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS------LTMEQKNG-GNVLQ 51 usage_00130.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-----LTMEQKNG-GNVLQ 54 usage_00143.pdb 1 --KKISIEGNIAAGKSTFVNILK-----WEVVPEPVARWCNV-----------QSTNVLQ 42 usage_00144.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNV-----------QSTNVLQ 47 usage_00145.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNV-----------QSTNVLQ 47 usage_00204.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-----LTMEQKNG-GNVLQ 54 KKISIEGNIAAGKSTFVNILK WEVVPEPVARW NVLQ usage_00033.pdb 51 MMYE- 54 usage_00034.pdb 52 MMYEK 56 usage_00035.pdb 52 MMYEK 56 usage_00036.pdb 52 MMYEK 56 usage_00037.pdb 52 MMYEK 56 usage_00046.pdb 54 MMYE- 57 usage_00088.pdb 47 MMYEK 51 usage_00089.pdb 47 MMYEK 51 usage_00114.pdb 45 MMYEK 49 usage_00128.pdb 53 MMYE- 56 usage_00129.pdb 52 MMYE- 55 usage_00130.pdb 55 MMYE- 58 usage_00143.pdb 43 MMYE- 46 usage_00144.pdb 48 MMYE- 51 usage_00145.pdb 48 MMYE- 51 usage_00204.pdb 55 MMYE- 58 MMYE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################