################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:46 2021 # Report_file: c_1184_239.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01420.pdb # 2: usage_01985.pdb # 3: usage_02318.pdb # 4: usage_02319.pdb # 5: usage_02336.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 28 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 28 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01420.pdb 1 -GPVTEITTTEY-ENGEAKKVKAK---- 22 usage_01985.pdb 1 ---VTAEITNKENSPVKASYQIKQTV-M 24 usage_02318.pdb 1 ---VEVTYAITNSWGSGASVNVTIKN-- 23 usage_02319.pdb 1 ---VEVTYAITNSWGSGASVNVTIKN-- 23 usage_02336.pdb 1 G--KVTQQVQD-E-H-RGTHWNMTVTN- 22 v a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################