################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:30 2021 # Report_file: c_0684_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00031.pdb # 2: usage_00081.pdb # 3: usage_00245.pdb # 4: usage_00352.pdb # 5: usage_00494.pdb # # Length: 71 # Identity: 52/ 71 ( 73.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 71 ( 74.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 71 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 --FSINASPGVVVDIASTWPLDPGVEVTLTMKVASGSTGDQKVQISYY-----PVKALLY 53 usage_00081.pdb 1 TSFSINASPGVVVDI--TWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLY 58 usage_00245.pdb 1 TSFSINASPGVVVDI--TWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLY 58 usage_00352.pdb 1 TSFSINASPGVVVDI--TWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLY 58 usage_00494.pdb 1 TSFSINASPGVVVDI--TWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTPPVKALLY 58 FSINASPGVVVDI TWPLDPGVEVTLTMKaASGSTGDQKVQISYY PVKALLY usage_00031.pdb 54 LTGVE------ 58 usage_00081.pdb 59 LT--------- 60 usage_00245.pdb 59 LTAVEISLCAD 69 usage_00352.pdb 59 LTAVE------ 63 usage_00494.pdb 59 LTAVEISLC-- 67 LT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################