################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:05 2021 # Report_file: c_1302_53.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00074.pdb # 2: usage_00095.pdb # 3: usage_00611.pdb # 4: usage_00640.pdb # 5: usage_00692.pdb # 6: usage_00693.pdb # 7: usage_00694.pdb # 8: usage_01067.pdb # 9: usage_01327.pdb # 10: usage_01390.pdb # 11: usage_01413.pdb # # Length: 61 # Identity: 6/ 61 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 61 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 61 ( 45.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM--DK--N-GR-VKL--------- 45 usage_00095.pdb 1 --------LRQIVSGLKYLHE-QEILHRDLKLGNFFI--NE--S-ME-LKV--------- 36 usage_00611.pdb 1 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL--NT--T-CD-LKI--------- 44 usage_00640.pdb 1 TEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIML--LDRNVPKP-RIKIIDFGLAHK 56 usage_00692.pdb 1 SEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSP--A-PRL------------ 44 usage_00693.pdb 1 SEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSP--A-PRL------------ 44 usage_00694.pdb 1 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL--NT--T-CD-LKI--------- 44 usage_01067.pdb 1 TDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMI--DH--E-HR-KLRL-------- 45 usage_01327.pdb 1 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL--NT--T-CD-LKI--------- 44 usage_01390.pdb 1 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL--NT--T-CD-LKI--------- 44 usage_01413.pdb 1 -DDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAV--NE--D-CE-LKI--------- 43 Y H HrD K N usage_00074.pdb - usage_00095.pdb - usage_00611.pdb - usage_00640.pdb 57 I 57 usage_00692.pdb - usage_00693.pdb - usage_00694.pdb - usage_01067.pdb - usage_01327.pdb - usage_01390.pdb - usage_01413.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################