################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:24:13 2021 # Report_file: c_0588_51.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00131.pdb # 8: usage_00408.pdb # 9: usage_00409.pdb # 10: usage_00427.pdb # # Length: 72 # Identity: 27/ 72 ( 37.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 72 ( 51.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 72 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHT 60 usage_00021.pdb 1 -KVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFY 59 usage_00050.pdb 1 --VVDLGCGRGGWSYYAATMNV--QEVRGYTGGPGHEEPMLMQSYGWNIVTMKSGVDVFY 56 usage_00051.pdb 1 --VVDLGCGRGGWSYYAATMNV--QEVRGYTGGPGHEEPMLMQSYGWNIVTMKSGVDVFY 56 usage_00052.pdb 1 -KVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFY 59 usage_00053.pdb 1 -KVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFY 59 usage_00131.pdb 1 -TVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK 59 usage_00408.pdb 1 -KVVDLGCGRGGWSYYAATIRKVQEVRGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH 59 usage_00409.pdb 1 -KVVDLGCGRGGWSYYAATIRKVQEVRGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH 59 usage_00427.pdb 1 -KVIDLGCGRGGWSYYAATLKKVQEVRGYTKGGAGHEEPMLMQSYGWNLVSLKSGVDVFY 59 V DLGCGRGgWsYYaA G GHE P l syGWN v KS VDv usage_00020.pdb 61 LPVERTDVIMCD 72 usage_00021.pdb 60 RPSECCDTLLCD 71 usage_00050.pdb 57 KPSEISDTLLCD 68 usage_00051.pdb 57 KPSEISDTLLCD 68 usage_00052.pdb 60 KPSEISDTLLCD 71 usage_00053.pdb 60 KPSEISDTLLCD 71 usage_00131.pdb 60 MEPFQADTVLCD 71 usage_00408.pdb 60 MAAEPCDTLLCD 71 usage_00409.pdb 60 MAAEPCDTLLCD 71 usage_00427.pdb 60 KPSEPSDTLFCD 71 e Dt CD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################