################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:01:33 2021 # Report_file: c_1426_18.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00292.pdb # 7: usage_00295.pdb # 8: usage_00297.pdb # 9: usage_00299.pdb # 10: usage_00300.pdb # 11: usage_00301.pdb # 12: usage_00304.pdb # 13: usage_00306.pdb # 14: usage_00314.pdb # 15: usage_00315.pdb # 16: usage_00318.pdb # 17: usage_00320.pdb # 18: usage_00322.pdb # 19: usage_00323.pdb # 20: usage_00359.pdb # 21: usage_00498.pdb # 22: usage_00680.pdb # 23: usage_00681.pdb # 24: usage_00684.pdb # 25: usage_00685.pdb # 26: usage_00687.pdb # 27: usage_00689.pdb # 28: usage_00693.pdb # 29: usage_00694.pdb # 30: usage_00770.pdb # 31: usage_00771.pdb # 32: usage_00772.pdb # 33: usage_00773.pdb # 34: usage_00774.pdb # 35: usage_00775.pdb # 36: usage_00776.pdb # 37: usage_00777.pdb # 38: usage_00780.pdb # 39: usage_00781.pdb # 40: usage_00785.pdb # 41: usage_00861.pdb # 42: usage_00864.pdb # # Length: 75 # Identity: 10/ 75 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 75 ( 34.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 75 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00017.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00018.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00019.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQR 42 usage_00020.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQR 43 usage_00292.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00295.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00297.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00299.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00300.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00301.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00304.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00306.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00314.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00315.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00318.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00320.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00322.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00323.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00359.pdb 1 -AYLRSGWNVLDFIIVF----LGVFTAILV---------KALRAFRVLRPLRLVSGVPSL 46 usage_00498.pdb 1 DPWSLFDFVVVIISIVG----MFLADLIE-TYFVSPTLFRVIRLARIGRILRLVTAVPQM 55 usage_00680.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00681.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00684.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00685.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00687.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00689.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00693.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00694.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00770.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00771.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00772.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00773.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00774.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00775.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00776.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00777.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00780.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 usage_00781.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00785.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00861.pdb 1 DPWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 43 usage_00864.pdb 1 -PWSLFDFFVVAISLVPTSSG--------F---------EILRVLRVLRLFRLVTAVPQM 42 pwslfdf Vv is V lR RvlR RLVtaVPq usage_00016.pdb 43 RKIVSALISVIPGM- 56 usage_00017.pdb 44 RKIVSALISVIP--- 55 usage_00018.pdb 43 RKIVSALISVIP--- 54 usage_00019.pdb 43 KIVSALISVIPG--- 54 usage_00020.pdb 44 KIVSALISVIPG--- 55 usage_00292.pdb 43 RKIVSALISVIPGML 57 usage_00295.pdb 44 RKIVSALISVIPGML 58 usage_00297.pdb 43 RKIVSALISVIPGML 57 usage_00299.pdb 44 RKIVSALISVIPGML 58 usage_00300.pdb 43 RKIVSALISVIPGML 57 usage_00301.pdb 44 RKIVSALISVIPGML 58 usage_00304.pdb 43 RKIVSALISVIPG-- 55 usage_00306.pdb 43 RKIVSALISVIPG-- 55 usage_00314.pdb 43 RKIVSALISVIPG-- 55 usage_00315.pdb 43 RKIVSALISVIP--- 54 usage_00318.pdb 44 RKIVSALISVIPGML 58 usage_00320.pdb 44 RKIVSALISVIPGML 58 usage_00322.pdb 43 RKIVSALISVIPGML 57 usage_00323.pdb 44 RKIVSALISVIPGML 58 usage_00359.pdb 47 QVVLNSIFKAMLPLF 61 usage_00498.pdb 56 RKIVSALISVIPGM- 69 usage_00680.pdb 44 RKIVSALISVIPGM- 57 usage_00681.pdb 44 RKIVSALISVIPGML 58 usage_00684.pdb 44 RKIVSALISVIPGM- 57 usage_00685.pdb 43 RKIVSALISVIPGM- 56 usage_00687.pdb 44 RKIVSALISVIPGML 58 usage_00689.pdb 44 RKIVSALISVIP--- 55 usage_00693.pdb 44 RKIVSALISVIPGML 58 usage_00694.pdb 44 RKIVSALISVIPGM- 57 usage_00770.pdb 43 RKIVSALISVIPGML 57 usage_00771.pdb 44 RKIVSALISVIPGML 58 usage_00772.pdb 44 RKIVSALISVIPGML 58 usage_00773.pdb 44 RKIVSALISV----- 53 usage_00774.pdb 44 RKIVSALISVIPGML 58 usage_00775.pdb 43 RKIVSALISVIPGML 57 usage_00776.pdb 43 RKIVSALISVIPGML 57 usage_00777.pdb 44 RKIVSALISVIPGML 58 usage_00780.pdb 43 RKIVSALISVIPGML 57 usage_00781.pdb 44 RKIVSALISVIPGML 58 usage_00785.pdb 44 RKIVSALISVIPGML 58 usage_00861.pdb 44 RKIVSALISVIPGML 58 usage_00864.pdb 43 RKIVSALISVIP--- 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################