################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:20:08 2021 # Report_file: c_0134_1.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00035.pdb # 9: usage_00036.pdb # 10: usage_00037.pdb # 11: usage_00038.pdb # 12: usage_00039.pdb # 13: usage_00040.pdb # 14: usage_00041.pdb # 15: usage_00080.pdb # # Length: 188 # Identity: 120/188 ( 63.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 160/188 ( 85.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/188 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00029.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00030.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00031.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00032.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00033.pdb 1 -ERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 59 usage_00034.pdb 1 -ERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 59 usage_00035.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00036.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00037.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00038.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00039.pdb 1 -ERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 59 usage_00040.pdb 1 GERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 60 usage_00041.pdb 1 -ERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVD 59 usage_00080.pdb 1 GERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTID 60 ERGLHHLIWEVVDNAVDEAMAGyATtVnVvlleDGgVEVaDDGRGIPVatHAsGiPTvD usage_00028.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00029.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00030.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00031.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00032.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00033.pdb 60 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 119 usage_00034.pdb 60 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 119 usage_00035.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00036.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00037.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00038.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00039.pdb 60 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 119 usage_00040.pdb 61 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 120 usage_00041.pdb 60 VVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLG 119 usage_00080.pdb 61 VVMTQLH----------------GV-GVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGK 103 VVMTQLH hg GVSVVNALSTRLEveikRDGYEWsQvYekSePlg usage_00028.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERV---- 176 usage_00029.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVAP-H 179 usage_00030.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTAPH 180 usage_00031.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERV---- 176 usage_00032.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERAP--H 178 usage_00033.pdb 120 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERV---- 175 usage_00034.pdb 120 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERP---H 176 usage_00035.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERTAP-H 179 usage_00036.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVP--H 178 usage_00037.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERHK--- 177 usage_00038.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVH--- 177 usage_00039.pdb 120 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVT--- 176 usage_00040.pdb 121 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVP--H 178 usage_00041.pdb 120 LKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVT--Q 177 usage_00080.pdb 104 LKQGGETKETGTTIRFWADPEIFETTDYNFETVARRLQEMAFLNKGLTIELTDERD---- 159 LKQGapTKkTGsTvRFWADPavFETTeYdFETVARRLQEMAFLNKGLTInLTDER usage_00028.pdb 177 -KSRTFH- 182 usage_00029.pdb 180 KVKSRTFH 187 usage_00030.pdb 181 KVKSRTFH 188 usage_00031.pdb 177 -VKSRTFH 183 usage_00032.pdb 179 KVKSRTFH 186 usage_00033.pdb 176 -VKSRTFH 182 usage_00034.pdb 177 KVKSRTFH 184 usage_00035.pdb 180 KVKSRTFH 187 usage_00036.pdb 179 KVKSRTFH 186 usage_00037.pdb 178 V-KSRTFH 184 usage_00038.pdb 178 KVKSRTFH 185 usage_00039.pdb 177 KVKSRTFH 184 usage_00040.pdb 179 KVKSRTFH 186 usage_00041.pdb 178 KVKSRTFH 185 usage_00080.pdb 160 -GKHRVFH 166 k r f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################