################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:14:26 2021 # Report_file: c_0405_13.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00039.pdb # 2: usage_00087.pdb # 3: usage_00102.pdb # 4: usage_00155.pdb # 5: usage_00177.pdb # 6: usage_00179.pdb # 7: usage_00183.pdb # 8: usage_00245.pdb # 9: usage_00301.pdb # 10: usage_00302.pdb # 11: usage_00307.pdb # 12: usage_00461.pdb # 13: usage_00462.pdb # 14: usage_00511.pdb # 15: usage_00520.pdb # 16: usage_00522.pdb # 17: usage_00528.pdb # 18: usage_00555.pdb # 19: usage_00570.pdb # # Length: 80 # Identity: 13/ 80 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 80 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 80 ( 28.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 --KKLKCLAYDFYPGKIDVHWTRAGEVQ-EP-ELRGDVLH-NGNGTYQSWVVVAVPPQDT 55 usage_00087.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00102.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00155.pdb 1 GEVTLRCWALGFYPADITLTWQLNGEEL-TQDMELVETRPA-GDGTFQKWASVVVPLGKE 58 usage_00177.pdb 1 -KKKLKCLAYDFYPGKIDVHWTRAGEVQ-EP-ELRGDVLH-NGNGTYQSWVVVAVPPQDT 56 usage_00179.pdb 1 GEVTLRCWALGFYPADITLTWQLNGEEL-TQDMELVETRPA-GDGTFQKWASVVVPLGKE 58 usage_00183.pdb 1 HEATLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDRTFQKWAAVVVPSGEE 58 usage_00245.pdb 1 GNITVTCRASSFYPRNITLTWRQDGVSLSHNTQQWGDVLPD-GNGTYQTWVATRIRQGEE 59 usage_00301.pdb 1 GEVTLRCWALGFYPADITLTW-----------MELVETRPA-GDGTFQKWASVVVPL--Q 46 usage_00302.pdb 1 GEVTLRCWALGFYPADITLTW-----------MELVETRPA-GDGTFQKWASVVV----Q 44 usage_00307.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00461.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00462.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00511.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWVAVVVPSGQE 58 usage_00520.pdb 1 GEVTLRCWALGFYPADITLTWQLNGEEL-TQDMELVETRPA-GDGTFQKWASVVVPLGKE 58 usage_00522.pdb 1 GEVTLRCWALGFYPADITLTWQLNGEEL-TQDMELVETRPA-GDGTFQKWASVVVPLGKE 58 usage_00528.pdb 1 HEATLRCWALSFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDGTFQKWAAVVVPSGQE 58 usage_00555.pdb 1 -DVTLRCWALGFYPADITLTWQLNGEEL-TQDMELVETRPA-GDGTFQKWAAVVVPLGKE 57 usage_00570.pdb 1 -EATLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPA-GDRTFQKWAAVVVPSGEE 57 l C A FYP I W G T Q W v v usage_00039.pdb 56 APYSCHVQHSSLAQPLVVPW 75 usage_00087.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00102.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00155.pdb 59 QNYTCRVYHEGLPEPLTLRW 78 usage_00177.pdb 57 APYSCHVQHSSLAQPLVVPW 76 usage_00179.pdb 59 QNYTCRVYHEGLPEPLTLR- 77 usage_00183.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00245.pdb 60 QRFTCYMEHSGNH--GTHPV 77 usage_00301.pdb 47 -NYTCRVYHEGLPEPLTLRW 65 usage_00302.pdb 45 -NYTCRVYHEGLPEPLTLRW 63 usage_00307.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00461.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00462.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00511.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00520.pdb 59 QNYTCRVYHEGLPEPLTLR- 77 usage_00522.pdb 59 QNYTCRVYHEGLPEPLTLR- 77 usage_00528.pdb 59 QRYTCHVQHEGLPKPLTLRW 78 usage_00555.pdb 58 QSYTCHVYHEGLPEPLILRW 77 usage_00570.pdb 58 QRYTCHVQHEGLPKPLTLRW 77 y C v H l l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################