################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:03 2021 # Report_file: c_1260_77.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00544.pdb # 2: usage_00729.pdb # 3: usage_01098.pdb # 4: usage_01099.pdb # 5: usage_01100.pdb # 6: usage_01101.pdb # 7: usage_01102.pdb # 8: usage_01103.pdb # 9: usage_01104.pdb # 10: usage_01533.pdb # 11: usage_01534.pdb # # Length: 29 # Identity: 4/ 29 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 29 ( 55.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 29 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00544.pdb 1 HSVKIYDTCIGCTQCVRACPLDVLE---M 26 usage_00729.pdb 1 KLQINNRECTRCMHCLNVMPRALRI---- 25 usage_01098.pdb 1 -LTIDNRECVRCMHCINKMPKALKPGDE- 27 usage_01099.pdb 1 -LTIDNRECVRCMHCINKMPKALKPGDE- 27 usage_01100.pdb 1 ELTIDNRECVRCMHCINKMPKALKP---- 25 usage_01101.pdb 1 ELTIDNRECVRCMHCINKMPKALKP---- 25 usage_01102.pdb 1 ELTIDNRECVRCMHCINKMPKALKPGDE- 28 usage_01103.pdb 1 ELTIDNRECVRCMHCINKMPKALKP---- 25 usage_01104.pdb 1 ELTIDNRECVRCMHCINKMPKALKPGDE- 28 usage_01533.pdb 1 -LTIDNRECVRCMHCINKMPKALKPGDE- 27 usage_01534.pdb 1 ELTIDNRECVRCMHCINKMPKALKPGDE- 28 l i nreC rCmhC n mP al #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################