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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:22:53 2021
# Report_file: c_0504_9.html
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#====================================
# Aligned_structures: 6
#   1: usage_00006.pdb
#   2: usage_00077.pdb
#   3: usage_00084.pdb
#   4: usage_00085.pdb
#   5: usage_00086.pdb
#   6: usage_00125.pdb
#
# Length:        164
# Identity:       26/164 ( 15.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/164 ( 32.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           41/164 ( 25.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00006.pdb         1  GKEGQAAVVAEAH-AVSGTEPESVTYVEAHGTATRLGDPVEVAALTDAFRR--GT----S   53
usage_00077.pdb         1  -PAAQRGV-ARAL-AKAGVAADDVTYIETNAAGSQIPDLIELKAIAAVYRDGS-------   50
usage_00084.pdb         1  SAKSQMDLERDIY-ETYGIHPESISYVEMHGTGTKQGDPIELEALSTVFQE--KT----D   53
usage_00085.pdb         1  SAKSQMDLERDIY-ETYGIHPESISYVEMHGTGTKQGDPIELEALSTVFQE--KT----D   53
usage_00086.pdb         1  SVKGQAEVIQKVI-DQTGIHPETIAYVEAHGTGTKLGDPIELSALQSVYGR--YT----D   53
usage_00125.pdb         1  -GKAQAALIQD--AR--GIDPDSIGYVEAHGTGTGLGDPVEVNALDSAYRA--LRTAEGG   53
                               Q            G  p    YvE hgtgt  gDp E  Al               

usage_00006.pdb        54  D-TG--FCAIGSLKSNVGHLDAAAGVAGVIKTAL-LRHRSLVPTLNHERPNPAIDFA-AT  108
usage_00077.pdb        51  -DT---PCSLGSVKPNIGHPQCAEGIAGVIKTVL-LRNRAIVPFLSGRQPLEHFDFA-AT  104
usage_00084.pdb        54  K-KQ--FCAIGSVKSNIGHTSAAAGVAGVQKVLLCMNHKTLVPTLN-------FEFE-HS  102
usage_00085.pdb        54  K-KQ--FCAIGSVKSNIGHTSAAAGVAGVQKVLLCMNHKTLVPTLNF------FEFE-HS  103
usage_00086.pdb        54  K-KQ--YCGIGSVKTNLGHLDTAAGMAGCIKVVMSLYHQEIAPSINYKEPNPNLHLE-DS  109
usage_00125.pdb        54  PPHAARPCALGSVKTNIGHAESAAGLAGVLKVLL-ARHRELPPALHCDRLNPHLP--LDG  110
                                  C  GSvK N GH   AaG AGv K  l   h    P l               

usage_00006.pdb       109  PFYVNTETRPWAGE-------GPLRAGVSSFGIGGTNAHAILQE  145
usage_00077.pdb       105  PLRFERALTPWPD--------APLLAAVSSFADGGTNAHAVLAG  140
usage_00084.pdb       103  PLYVNTELKPWETAD-----GKPRRACVSSFGYSGTNAHIVIEE  141
usage_00085.pdb       104  PLYVNTELKPWETAD-----GKPRRACVSSFGYSGTNAHIVIEE  142
usage_00086.pdb       110  PFFVAEEKKELT---------RAHRMALSSFGLGGTNTHAIFEQ  144
usage_00125.pdb       111  GFEVVRELRRWEPCTDATGRPWPLRAGVSSFGFGGANAHVVLEA  154
                           p  v  e   w           p ra vSSFg  GtNaH     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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