################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:29:17 2021 # Report_file: c_0026_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00035.pdb # 9: usage_00036.pdb # 10: usage_00061.pdb # 11: usage_00062.pdb # # Length: 201 # Identity: 66/201 ( 32.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/201 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/201 ( 8.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 ----RYGVINA-AEEKAALVDA-IDEKKTTIAGKLFHHGKIGHVDVVVVESGIGKVASAL 54 usage_00020.pdb 1 ----RYGVINA-AEEKAALVDA-IDEKKTTIAGKLFHHGKIGHVDVVVVESGIGKVASAL 54 usage_00030.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00031.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00032.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00033.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00034.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00035.pdb 1 -----IGIIAAMPEELAYLVQHLDNTQEQVVLGNTYHTGTIASHEVVLVESGIGKVMSAM 55 usage_00036.pdb 1 -----IGIIAAMPEELAYLVQHLDNAQEQVVLGNTYHTGTIVSHEVVLVESGIGKVMSAM 55 usage_00061.pdb 1 -GSMKIGIIAAMEEELSLLLANLLDAQEHQVLSKTYYTGRFGKHELILVQSGVGKVMSAM 59 usage_00062.pdb 1 MGSMKIGIIAAMEEELSLLLANLLDAQEHQVLSKTYYTGRFGKHELILVQSGVGKVMSAM 60 G I A EE L G V SG GKV SA usage_00019.pdb 55 TTTLLITNFGVDAVINSGSAGALGTDLRIGDIVIADYLAYADADARAFGYAYGQVPQQPA 114 usage_00020.pdb 55 TTTLLITNFGVDAVINSGSAGALGTDLRIGDIVIADYLAYADADARAFGYAYGQVPQQPA 114 usage_00030.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00031.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00032.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00033.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00034.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00035.pdb 56 SVAILADHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00036.pdb 56 SVAILAVHFQVDALINTGSAGAVAEGIAVGDVVIADKLAYHDVDVTAFGYAYGQMAQQPL 115 usage_00061.pdb 60 TVAILVEHFKAQAIINTGSAGAVASHLAIGDVVVADRLVYHDVDATAFGYAYGQMAGQPL 119 usage_00062.pdb 61 TVAILVEHFKAQAIINTGSAGAVASHLAIGDVVVADRLVYHDVDATAFGYAYGQMAGQPL 120 L F A IN GSAGA GD V AD L Y D D AFGYAYGQ QP usage_00019.pdb 115 RFKADTDLSNDLSESYEKVTDARLVRGLVVTSDSFIASNEQKQTILTHFPEAQSAE-EGA 173 usage_00020.pdb 115 RFKADTDLSNDLSESYEKVTDARLVRGLVVTSDSFIASNEQKQTILTHFPEAQSAE-EGA 173 usage_00030.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00031.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00032.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00033.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00034.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00035.pdb 116 YFESDKTFVAQIQESLSQLD-QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 174 usage_00036.pdb 116 YFESDKTFVAQIQESL-----QNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAVEMEGA 170 usage_00061.pdb 120 YYDCDPQFVAIFKQVLKHEK-TNGQVGLIATGDSFVAGQDKIDQIKTAFSNVLAVEMEGA 178 usage_00062.pdb 121 YYDCDPQFVAIFKQVLKHEK-TNGQVGLIATGDSFVAGQDKIDQIKTAFSNVLAVEMEGA 179 D GL T DSF A I F E EGA usage_00019.pdb 174 SIAQVANYFDVPFAVVRA--- 191 usage_00020.pdb 174 SIAQVANYFDVPFAVVRAISD 194 usage_00030.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00031.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00032.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00033.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00034.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00035.pdb 175 AIAQAAHTLNLPVLVIRA--- 192 usage_00036.pdb 171 AIAQAAHALNLPVLVIRAM-- 189 usage_00061.pdb 179 AIAQAAHTAGKPFIVVRA--- 196 usage_00062.pdb 180 AIAQAAHTAGKPFIVVRA--- 197 IAQ A P V RA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################