################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:37 2021 # Report_file: c_0659_38.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00021.pdb # 2: usage_00168.pdb # 3: usage_00197.pdb # 4: usage_00257.pdb # 5: usage_00263.pdb # 6: usage_00275.pdb # 7: usage_00293.pdb # 8: usage_00375.pdb # 9: usage_00389.pdb # 10: usage_00484.pdb # 11: usage_00489.pdb # # Length: 69 # Identity: 12/ 69 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 69 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 69 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 RFTISRDNAKNTVYLQMNNMKPEDTAVYYCAAGDN---YY-Y-T-RTY------EY-DYW 47 usage_00168.pdb 1 RFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG---GF-S-S-NRE------LY-DGW 47 usage_00197.pdb 1 RVTISVDTSKNQFSLKLSSVTAADTAVYYCARLGP--DDY-T-L-D--------GM-DVW 46 usage_00257.pdb 1 RFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANIE-AGTY-Y-G----------PGRDYW 47 usage_00263.pdb 1 RFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCG-V-RSI---------------REYW 43 usage_00275.pdb 1 --TISRDYVKNTAYLQMNNLKPDDTAVYICNAETR---G-----------------FMHW 38 usage_00293.pdb 1 --TISRDNAKNTVYLQMNGLAPEDTAVYYCAASDK---YNFD-T-SHA------GY-GYW 46 usage_00375.pdb 1 RFTISADTSKNTAYLQMNSLRAEDTAVYYCYYHYY-G-WH-P-G--Y-------GLSYSS 47 usage_00389.pdb 1 RFTMSRDNAKNTVYLQMNSLKPEDTAVYYCAADGS---QY-RSTYSFRDKP---DY-GSW 52 usage_00484.pdb 1 RLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVS-G--------D---YVRDF-DLW 47 usage_00489.pdb 1 RFTISRDTAGDILFLQMNSLRSEDSAIYYCVRDLY---GD-Y-V-G--------RY-AYW 45 T S D k L m Dta YyC w usage_00021.pdb 48 GQGTQVTVS 56 usage_00168.pdb 48 GQGTQVTV- 55 usage_00197.pdb 47 GQGTTVTV- 54 usage_00257.pdb 48 GQGTQVTVS 56 usage_00263.pdb 44 GQGTQVTVS 52 usage_00275.pdb 39 GQGTQVTVS 47 usage_00293.pdb 47 GQGTQVTV- 54 usage_00375.pdb 48 GQGTLVTVS 56 usage_00389.pdb 53 GQGTQVTVS 61 usage_00484.pdb 48 GRGTLVTVS 56 usage_00489.pdb 46 GQGTLVIVS 54 GqGT VtV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################