################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:07:36 2021 # Report_file: c_0538_2.html ################################################################################################ #==================================== # Aligned_structures: 44 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00004.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00009.pdb # 8: usage_00010.pdb # 9: usage_00011.pdb # 10: usage_00012.pdb # 11: usage_00013.pdb # 12: usage_00014.pdb # 13: usage_00015.pdb # 14: usage_00016.pdb # 15: usage_00018.pdb # 16: usage_00021.pdb # 17: usage_00022.pdb # 18: usage_00023.pdb # 19: usage_00028.pdb # 20: usage_00029.pdb # 21: usage_00030.pdb # 22: usage_00031.pdb # 23: usage_00032.pdb # 24: usage_00035.pdb # 25: usage_00036.pdb # 26: usage_00037.pdb # 27: usage_00038.pdb # 28: usage_00039.pdb # 29: usage_00040.pdb # 30: usage_00041.pdb # 31: usage_00042.pdb # 32: usage_00045.pdb # 33: usage_00046.pdb # 34: usage_00047.pdb # 35: usage_00048.pdb # 36: usage_00050.pdb # 37: usage_00052.pdb # 38: usage_00053.pdb # 39: usage_00054.pdb # 40: usage_00055.pdb # 41: usage_00056.pdb # 42: usage_00057.pdb # 43: usage_00058.pdb # 44: usage_00059.pdb # # Length: 140 # Identity: 27/140 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/140 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/140 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------------------GEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 40 usage_00002.pdb 1 -------------------GEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 40 usage_00004.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00006.pdb 1 SAADKNNVKGIFTKIAGHAEEYGAETLERMFITYPPTKTYFPH-FDLSHGSAQIKGHGKK 59 usage_00007.pdb 1 SAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGAK 59 usage_00008.pdb 1 SPADKTNIKSTWDKIGGHAGDYGGEALDRTFQSFPTTKTYFPH-FDLSPGSAQVKAHGKK 59 usage_00009.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00010.pdb 1 -----------------NAGAYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGEK 42 usage_00011.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00012.pdb 1 SADDKTNIKNCWGKIGGHGGEYGEEALQRMFAAFPTTKTYFSH-IDVSPGSAQVKAHGKK 59 usage_00013.pdb 1 SADDKTNIKNCWGKIGGHGGEYGEEALQRMFAAFPTTKTYFSH-IDVSPGSAQVKAHGKK 59 usage_00014.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00015.pdb 1 -----------------HAAEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGAK 42 usage_00016.pdb 1 -AADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGAK 58 usage_00018.pdb 1 -----------------HAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 42 usage_00021.pdb 1 -----------------HAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 42 usage_00022.pdb 1 -----------------HAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 42 usage_00023.pdb 1 SAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGAK 59 usage_00028.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00029.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00030.pdb 1 -------------------GEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 40 usage_00031.pdb 1 SDNDKTNVKATWSKVGDHASDYVAEALERMFFSFPTTKTYFPH-FDLSHGSGQVKGHGKK 59 usage_00032.pdb 1 SDNDKTNVKATWSKVGDHASDYVAEALERMFFSFPTTKTYFPH-FDLSHGSGQVKGHGKK 59 usage_00035.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00036.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00037.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00038.pdb 1 ------------------AGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 41 usage_00039.pdb 1 -------------------GEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 40 usage_00040.pdb 1 ------------------AGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 41 usage_00041.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00042.pdb 1 -------------------GEYGAEAVERMFLGFPTTKTYFPH-FDFTHGSEQIKAHGKK 40 usage_00045.pdb 1 -QEERDEIVKTFFSA--NSSAIGTKALERMFVVFPWTNAYFAKF--------SASIHAAI 49 usage_00046.pdb 1 -------------------ADYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGAK 40 usage_00047.pdb 1 SAADKSNVKACWGKIGSHAGEYGAEALERTFCSFPTTKTYFPH-FDLSHGSAQVKAHGQK 59 usage_00048.pdb 1 SADDKTNIKNCWGKIGGHGGEYGEEALQRMFAAFPTTKTYFSH-IDVSPGSAQVKAHGKK 59 usage_00050.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00052.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00053.pdb 1 -----------------HAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 42 usage_00054.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00055.pdb 1 SPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 59 usage_00056.pdb 1 -------------------GEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 40 usage_00057.pdb 1 -PADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 58 usage_00058.pdb 1 ------------------AGEYGAEALERMFLSFPTTKTYFPH-FDLSHGSAQVKGHGKK 41 usage_00059.pdb 1 SPADKTNIKSTWDKIGGHAGDYGGEALDRTFQSFPTTKTYFPH-FDLSPGSAQVKAHGKK 59 y eal R F fP TktYF h q k Hg k usage_00001.pdb 41 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 100 usage_00002.pdb 41 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 100 usage_00004.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00006.pdb 60 VVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPAALTPEV 119 usage_00007.pdb 60 VAAALTKAVEHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAV 119 usage_00008.pdb 60 VADALTTAVAHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPTEFTPAV 119 usage_00009.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00010.pdb 43 VAAALTKAVGHLDDLPGTLSDLSDLHA-KLRVDPVNFKLLSHSLLVTLACHLPNDFTPAV 101 usage_00011.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVAPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00012.pdb 60 VADALAKAADHVEDLPGALSTLSDLHAHKLRVDPVNFKFLSHCLLVTLACHHPGDFTPAM 119 usage_00013.pdb 60 VADALAKAADHVEDLPGALSTLSDLHAHKLRVDPVNFKFLSHCLLVTLACHHPGDFTPAM 119 usage_00014.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00015.pdb 43 VAAALTKAVEHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAV 102 usage_00016.pdb 59 VAAALTKAVEHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAV 118 usage_00018.pdb 43 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 102 usage_00021.pdb 43 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 102 usage_00022.pdb 43 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 102 usage_00023.pdb 60 VAAALTKAVEHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAV 119 usage_00028.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00029.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00030.pdb 41 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 100 usage_00031.pdb 60 VGEALTQAVGHLDDLPSALSALSDLHAHKLRVDPVNFKLLSHCLLVTLSSHQPTEFTPEV 119 usage_00032.pdb 60 VGEALTQAVGHLDDLPSALSALSDLHAHKLRVDPVNFKLLSHCLLVTLSSHQPTEFTPEV 119 usage_00035.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00036.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00037.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00038.pdb 42 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 101 usage_00039.pdb 41 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 100 usage_00040.pdb 42 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 101 usage_00041.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00042.pdb 41 VSEALTKAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPSEFTPAV 100 usage_00045.pdb 50 VVGALQDAVKHEDDVKAEFVNISKAHADKLHIDPGSFHLLTDSFIVELAHLKKVAFTPFV 109 usage_00046.pdb 41 VANALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPNDFTPAV 100 usage_00047.pdb 60 VADALTQAVAHMDDLPTAMSALSDLHAYKLRVDPVNFKFLSHCLLVTLACHHPAEFTPAV 119 usage_00048.pdb 60 VADALAKAADHVEDLPGALSTLSDLHAHKLRVDPVNFKFLSHCLLVTLACHHPGDFTPAM 119 usage_00050.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00052.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00053.pdb 43 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 102 usage_00054.pdb 60 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00055.pdb 60 MADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 119 usage_00056.pdb 41 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPWNFKLLSHCLLVTLAAHLPAEFTPAV 100 usage_00057.pdb 59 VADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 118 usage_00058.pdb 42 VADALTNAVAHVDDMPNALSALSDLHAHKLAVDPVNFKLLSHCLLVTLAAHLPAEFTPAV 101 usage_00059.pdb 60 VADALTTAVAHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPTEFTPAV 119 v AL A H D s lSdlHA KL vdP nFk L lV l h p fTP usage_00001.pdb 101 HASLDKFLASVSTVL----- 115 usage_00002.pdb 101 HASLDKFLASVSTVL----- 115 usage_00004.pdb 120 HASLDKFLASVSTVL----- 134 usage_00006.pdb 120 HASLDKFLCAVGTVLTA--- 136 usage_00007.pdb 120 HASLDKFLANVSTVLTSKYR 139 usage_00008.pdb 120 HASLDKFFAAVSTVLT---- 135 usage_00009.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00010.pdb 102 HASLDKFLANVSTVLTS--- 118 usage_00011.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00012.pdb 120 HASLDKFLASVSTVL----- 134 usage_00013.pdb 120 HASLDKFLASVSTVL----- 134 usage_00014.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00015.pdb 103 HASLDKFLANVSTVL----- 117 usage_00016.pdb 119 HASLDKFLANVSTVL----- 133 usage_00018.pdb 103 HASLDKFLASVSTVL----- 117 usage_00021.pdb 103 HASLDKFLASVSTVLT---- 118 usage_00022.pdb 103 HASLDKFLASVSTVL----- 117 usage_00023.pdb 120 HASLDKFLANVSTVLTSKYR 139 usage_00028.pdb 120 HASLDKFLASVSTVL----- 134 usage_00029.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00030.pdb 101 HASLDKFLASVSTVL----- 115 usage_00031.pdb 120 HASLDKFLSNVSTVLT---- 135 usage_00032.pdb 120 HASLDKFLSNVSTVLT---- 135 usage_00035.pdb 120 HASLDKFLASVSTVL----- 134 usage_00036.pdb 120 HASLDKFLASVSTVL----- 134 usage_00037.pdb 120 HASLDKFLASVSTVL----- 134 usage_00038.pdb 102 HASLDKFLASVSTVL----- 116 usage_00039.pdb 101 HASLDKFLASVSTVL----- 115 usage_00040.pdb 102 HASLDKFLASVSTVL----- 116 usage_00041.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00042.pdb 101 HASLDKFLANVSTVLTS--- 117 usage_00045.pdb 110 FAVWIKFFQVVIDAISS--- 126 usage_00046.pdb 101 HASLDKFLASVSTVL----- 115 usage_00047.pdb 120 HASLDKFFSAVSTVLTS--- 136 usage_00048.pdb 120 HASLDKFLASVSTVLT---- 135 usage_00050.pdb 120 HASLDKFLASVSTVL----- 134 usage_00052.pdb 120 HASLDKFLASVSTVLTS--- 136 usage_00053.pdb 103 HASLDKFLASVSTVLT---- 118 usage_00054.pdb 120 HASLDKFLASVSTV------ 133 usage_00055.pdb 120 HASLDKFLASVSTVL----- 134 usage_00056.pdb 101 HASLDKFLASVSTVL----- 115 usage_00057.pdb 119 HASLDKFLASVSTVLT---- 134 usage_00058.pdb 102 HASLDKFLASVSTVL----- 116 usage_00059.pdb 120 HASLDKFFAAVSTVL----- 134 hAsldKF V tv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################