################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:33 2021 # Report_file: c_1055_71.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00315.pdb # 2: usage_00323.pdb # 3: usage_00324.pdb # 4: usage_00554.pdb # 5: usage_00570.pdb # 6: usage_00730.pdb # 7: usage_00977.pdb # 8: usage_00978.pdb # 9: usage_01064.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 54 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 54 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00315.pdb 1 GTRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------VVNQV 42 usage_00323.pdb 1 --RHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------VVNQV 40 usage_00324.pdb 1 -TRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------VVNQV 41 usage_00554.pdb 1 ----EPLIRQLK---DGGKLLMPVGRYLQR-LVLAEKRGDEII------IK--- 37 usage_00570.pdb 1 -TVREFVEKAAKIAGFDIEWV--G----EGINEKGIDRN-TGKVIVEVS----- 41 usage_00730.pdb 1 -TRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------V---- 37 usage_00977.pdb 1 -TRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------VVNQV 41 usage_00978.pdb 1 GTRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------VVNQV 42 usage_01064.pdb 1 GTRHRTAERLAKQTGKVVIAVS-R----RR-NIISLYYKNYKY------V---- 38 er aK v r n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################