################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:34 2021 # Report_file: c_1079_71.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00294.pdb # 2: usage_00591.pdb # 3: usage_00621.pdb # 4: usage_00646.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 79 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 79 ( 39.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00294.pdb 1 -MYGLKAMLEGSA-ADY--AQVDDQVTFIDNHDME-----------RFHASNANRR-KLE 44 usage_00591.pdb 1 KMSYLKN-W--GE-GWGFV-PSDRALVFVDNHDNQR-GHGAGGAS--ILTF-WDAR-LYK 50 usage_00621.pdb 1 -MSYLKN-W--GE-GWGFM-PSDRALVFVDNHDNQR-GHGAGGAS--ILTF-WDAR-LYK 49 usage_00646.pdb 1 -MADLRN-A--GLVNSP--GYENRAVTFVDNHDTDRDEGSYT---VSIY-------SRKY 44 M Lkn g dra FvDNHD i usage_00294.pdb 45 QALAFTLTSRGVPAI-Y-- 60 usage_00591.pdb 51 MAVGFMLAHPYGFTRVMSS 69 usage_00621.pdb 50 MAVGFMLAHPYGFTRVMSS 68 usage_00646.pdb 45 QAYAYILTRAEGVPTVY-- 61 A f L g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################