################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:33 2021 # Report_file: c_1252_76.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00077.pdb # 2: usage_00531.pdb # 3: usage_00906.pdb # 4: usage_01127.pdb # 5: usage_01128.pdb # 6: usage_01129.pdb # 7: usage_01130.pdb # 8: usage_01131.pdb # # Length: 50 # Identity: 1/ 50 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 50 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 50 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 -TNILVPV-D-S-SDAAQAAFTEAVNIAQRHQ-----ANLTA-LYVVD-- 38 usage_00531.pdb 1 L-TIVLGV-ASN----DPTSVAVANTAADQLRNVGIDASVLA-LD----- 38 usage_00906.pdb 1 --GVEVWYYA-GDEKGRKLAVEISAKMAKALG-----LPNRGAKAT-K-- 39 usage_01127.pdb 1 --GIIVGI-D-D-SPAAQVAVRWAARDAELRK-----IPLTL-VHAVS-- 37 usage_01128.pdb 1 --GIIVGI-D-D-SPAAQVAVRWAARDAELRK-----IPLTL-VHAVS-- 37 usage_01129.pdb 1 ---VLVGV-D-G-SSASELATAIAFDEASRRN-----VDLVA-LHA---- 34 usage_01130.pdb 1 --PVLVGV-D-G-SSASELATAIAFDEASRRN-----VDLVA-LHA---- 35 usage_01131.pdb 1 --GIIVGI-D-D-SPAAQVAVRWAARDAELRK-----IPLTL-VHAVSPE 39 v a a A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################