################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:32 2021 # Report_file: c_1335_129.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00295.pdb # 2: usage_00296.pdb # 3: usage_00327.pdb # 4: usage_00328.pdb # 5: usage_00334.pdb # 6: usage_00335.pdb # 7: usage_00338.pdb # 8: usage_00339.pdb # 9: usage_01211.pdb # 10: usage_01212.pdb # 11: usage_01268.pdb # 12: usage_01288.pdb # # Length: 50 # Identity: 44/ 50 ( 88.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 50 ( 88.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 50 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00295.pdb 1 VGEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 50 usage_00296.pdb 1 VGEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 50 usage_00327.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_00328.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_00334.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_00335.pdb 1 VGEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 50 usage_00338.pdb 1 ------FLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 44 usage_00339.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_01211.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_01212.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 usage_01268.pdb 1 VGEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 50 usage_01288.pdb 1 -----LFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC 45 FLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNAC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################