################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:58 2021 # Report_file: c_1434_143.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00720.pdb # 2: usage_01020.pdb # 3: usage_02087.pdb # 4: usage_02846.pdb # # Length: 98 # Identity: 20/ 98 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/ 98 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 98 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00720.pdb 1 TEMEQCHVDAIVDTLDDFMSCF------PWAEKKQDVKE------QMFNELLTYNAPHLM 48 usage_01020.pdb 1 TEMEQCHVDAIVDTLDDFMSCF------PWAEKKQDVKE------QMFNELLTYNAPHLM 48 usage_02087.pdb 1 TPEEEAWVDAVHDLFKDFLAEFKKFAAE---------RRSGEVEKF-RSEFFLPARNTYF 50 usage_02846.pdb 1 TEMEQCHVDAIVDTLDDFMSCF------PWAE--QDVKE------QMFNELLTYNAPHLM 46 TemEqchVDAivDtldDFmscF ke q fnElltynaphlm usage_00720.pdb 49 QDLDTYLG--GREWLIGNSVTWADFYWEICSTTLL--- 81 usage_01020.pdb 49 QDLDTYLG--GREWLIGMSVTWADFYWEICSTTLL--- 81 usage_02087.pdb 51 NILNGLLEKSNSGFLIGSDITFADLVVVDNLLTLKNYG 88 usage_02846.pdb 47 QDLDTYLG--GREWLIGNSVTWADFYWEICSTTLL--- 79 qdLdtyLg grewLIG svTwADfyweicstTLl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################