################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:03 2021 # Report_file: c_1407_30.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00233.pdb # 2: usage_00410.pdb # 3: usage_00448.pdb # 4: usage_00458.pdb # 5: usage_00707.pdb # 6: usage_00728.pdb # 7: usage_00742.pdb # 8: usage_00743.pdb # 9: usage_00748.pdb # 10: usage_00749.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 75 ( 1.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/ 75 ( 81.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 ---------------TLAGI--LEQSSN---VGVIAGD---------------------- 18 usage_00410.pdb 1 KLYGRSRTDQNVSDA-IELYFNNPHL--SDARKHQLKKTFLKRLQLFYNTML-------- 49 usage_00448.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00458.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00707.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00728.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00742.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00743.pdb 1 ----------------YRQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 39 usage_00748.pdb 1 -----------------RQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 38 usage_00749.pdb 1 ----------------YRQW--FQNL--DDKSLKDVITLLIKRSLLYALAG-DSTGESQR 39 l usage_00233.pdb 19 K-TNEQRYNFISKFG 32 usage_00410.pdb --------------- usage_00448.pdb 39 AFIQTINTYF----- 48 usage_00458.pdb 39 AFIQTINTYF----- 48 usage_00707.pdb 39 AFIQTINTY------ 47 usage_00728.pdb 39 AFIQTINTYF----- 48 usage_00742.pdb 39 AFIQTINTYF----- 48 usage_00743.pdb 40 AFIQTINTYF----- 49 usage_00748.pdb 39 AFIQTINTYF----- 48 usage_00749.pdb 40 AFIQTINTYF----- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################