################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:58:53 2021 # Report_file: c_0004_64.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00231.pdb # 2: usage_00332.pdb # 3: usage_00346.pdb # # Length: 248 # Identity: 228/248 ( 91.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 232/248 ( 93.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/248 ( 6.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT 60 usage_00332.pdb 1 -WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL-------RGESAPT 52 usage_00346.pdb 1 -WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT 59 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL RGESAPT usage_00231.pdb 61 TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ----DRLSDVDTTPVVVNGVVFALAYN 116 usage_00332.pdb 53 TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ--DRLS-DVD-TTPVVVNGVVFALAYN 108 usage_00346.pdb 60 TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT---S-DVD-TTPVVVNGVVFALAYN 114 TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ s dvd TTPVVVNGVVFALAYN usage_00231.pdb 117 GNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH 176 usage_00332.pdb 109 GNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH 168 usage_00346.pdb 115 GNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH 174 GNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH usage_00231.pdb 177 RLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD 236 usage_00332.pdb 169 RLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD 228 usage_00346.pdb 175 RLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD 234 RLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD usage_00231.pdb 237 GTVYSIT- 243 usage_00332.pdb 229 GTVYSITR 236 usage_00346.pdb 235 GTVYSITR 242 GTVYSIT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################