################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:02 2021 # Report_file: c_1079_65.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00076.pdb # 2: usage_00135.pdb # 3: usage_00258.pdb # 4: usage_00274.pdb # 5: usage_00311.pdb # 6: usage_00353.pdb # 7: usage_00354.pdb # 8: usage_00355.pdb # 9: usage_00398.pdb # 10: usage_00399.pdb # 11: usage_00476.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 74 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 74 ( 59.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 ---------ATGRGVFVVGCEAAKKKGV---EIEGARIAVQG-F-GNVGGIA-AKLFQEA 45 usage_00135.pdb 1 -------TEEEYMWCMKQTLKGF-SGDG---YP--NMLLDD--GG------DLTNYVLDE 39 usage_00258.pdb 1 HDD----QQGTAVVVSAAFLNALKLTEK---------VVVNG-I-GAAGYNI-VKFLLDL 44 usage_00274.pdb 1 -------APITSLGVFLGIKAAVESRW-QSKRLDGMKVAVQG-L-GNVGKNL-CRHLHEH 49 usage_00311.pdb 1 ---------ATGFGVAVVVRESAKRFGI---KMEDAKIAVQG-F-GNVGTFT-VKNIERQ 45 usage_00353.pdb 1 ---------ATAKGVTICIKEAAKKRGI---DIKGARVVVQG-F-GNAGSYL-AKFMHDA 45 usage_00354.pdb 1 ---------ATAKGVTICIKEAAKKRGI---DIKGARVVVQG-F-GNAGSYL-AKFMHDA 45 usage_00355.pdb 1 --------TATAQGVTICIEEAVKKKGI---KLQNARIIIQG-F-GNAGSFL-AKFMHDA 46 usage_00398.pdb 1 ----------TGRGVFITAAAAAEKIGL---QVEGARVAIQG-F-GNVGNAA-ARAFHDH 44 usage_00399.pdb 1 ---------ATGRGVFITAAAAAEKIGL---QVEGARVAIQG-F-GNVGNAA-ARAFHDH 45 usage_00476.pdb 1 ---SFAQLEAQTRQLAAALRAIG----V----KREERVLLLMLD-GTDWPVA-FLGAIYA 47 usage_00076.pdb 46 GA----KVIAVQD- 54 usage_00135.pdb 40 -CELDGKIYGVSEE 52 usage_00258.pdb 45 GV----KNVVAVDR 54 usage_00274.pdb 50 DV----QLF----- 54 usage_00311.pdb 46 GG----KVCAIAEW 55 usage_00353.pdb 46 GA----KVVGISDA 55 usage_00354.pdb 46 GA----KVVGISDA 55 usage_00355.pdb 47 GA----KVIGISDA 56 usage_00398.pdb 45 GA----RVVAVQD- 53 usage_00399.pdb 46 GA----RVVAVQDH 55 usage_00476.pdb 48 GI----VPVAVN-- 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################