################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:14 2021 # Report_file: c_1115_51.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00016.pdb # 2: usage_00203.pdb # 3: usage_00338.pdb # 4: usage_00460.pdb # 5: usage_00463.pdb # 6: usage_00504.pdb # 7: usage_01222.pdb # 8: usage_01394.pdb # 9: usage_01442.pdb # 10: usage_01444.pdb # 11: usage_01557.pdb # # Length: 133 # Identity: 15/133 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/133 ( 21.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 95/133 ( 71.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -----------------------------------KELTAIFHKMD-KNGDGQLDRAELI 24 usage_00203.pdb 1 -----------------------------------KELTAIFHKMD-KNGDGQLDRAELI 24 usage_00338.pdb 1 ----------------------------------TKELTAIFHKMD-KNGDGQLDRAELI 25 usage_00460.pdb 1 -----------------------------------KELTAIFHKMD-KNGDGQLDRAELI 24 usage_00463.pdb 1 LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLD-NNGDGQLDRKELI 59 usage_00504.pdb 1 ---------------------------------ETKELTAIFHK-D-KNGDGQLDRAELI 25 usage_01222.pdb 1 ---------------------------------ETKELTAIFHK-D-KNGDGQLDRAELI 25 usage_01394.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMD-KNGDGQLDRAELI 59 usage_01442.pdb 1 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMD---GDG-QLRAELI 56 usage_01444.pdb 1 ---------------------------------ETKELTAIFK--MD---DGQL----DR 18 usage_01557.pdb 1 -DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMD-KNGDGQLDRAELI 58 KELTaIF d DG l li usage_00016.pdb 25 EGYKELMRMKGQDASMLDASAVEHEVDQVL--DAVDFDKNGYIEY-SEFVTVAMDRKTLL 81 usage_00203.pdb 25 EGYKELMRMKGQDASMLDASAVEHEVDQVL--DAVD-------EY-SEFVTVAMDRKTL- 73 usage_00338.pdb 26 EGYKELMRMKGQDASMLDASAVEHEVDQVL--DAVDFDKNGYIEY-SEFVTVAMDRKTLL 82 usage_00460.pdb 25 EGYKELMRMKGQDASMLDASAVEHEVDQVL--DAVDFDKNGYIEY-SEFVTVAMDRKTLL 81 usage_00463.pdb 60 EGYRKLMQW--------SSQIEAEVDHILQ--SVDF-R-NGYIEY-SEFVTVCMDKQLLL 106 usage_00504.pdb 26 EGYKELR--KGQDA-SLDASAVEHEVDQVL--DAVDFDKNGYIEY-SEFVTVA-DRKTLL 78 usage_01222.pdb 26 EGYKELR-----DA-SLDASAVEHEVDQVL--DAVDFDKNGYIEY-SEFVTVA-DRKTLL 75 usage_01394.pdb 60 EGYKELMRMKGQD-AMLDASAVEHEVDQVL--DAVI-------EY-SEFVTVAMDR---- 104 usage_01442.pdb 57 EGYKELM----------VEHEVDQVLDAVDEY--------------SEFVTVAMDRKTLL 92 usage_01444.pdb 19 AELIEGYKEL------------EHEVDQVL--DAVD------IEY-SEFVTVAMDRKTLL 57 usage_01557.pdb 59 EGYKELMRMKGQDASMLDASAVEHEVDQVL--DAVD---------FSEFVTVAMDRKTL- 106 egy el d v SEFVTVa Dr usage_00016.pdb 82 SRERLERAFRMFD 94 usage_00203.pdb ------------- usage_00338.pdb 83 SRERLERAFRMFD 95 usage_00460.pdb 82 SRERLERAFRMFD 94 usage_00463.pdb 107 SRERLLAAFQQF- 118 usage_00504.pdb 79 SRERLERAFRFD- 90 usage_01222.pdb 76 SRERLERAFRFD- 87 usage_01394.pdb ------------- usage_01442.pdb 93 SRERL-------- 97 usage_01444.pdb 58 SRERLERAFRMFD 70 usage_01557.pdb ------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################