################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:48 2021 # Report_file: c_0798_70.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00287.pdb # 4: usage_00288.pdb # # Length: 64 # Identity: 15/ 64 ( 23.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 64 ( 37.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 KLLLIDFDGTLFVDK-DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKK 59 usage_00013.pdb 1 KLIAIDLDGTLLNSKH--QVSLENENALRQAQRDGIEVVVSTGRAHFDVSIFEP------ 52 usage_00287.pdb 1 KLIAIDIDGTLLNEKN--ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLD------ 52 usage_00288.pdb 1 KLIAIDIDGTL----------QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLD------ 44 KLiaID DGTL idA A Gi Vv cTGR gv usage_00012.pdb 60 MN-- 61 usage_00013.pdb 53 --LG 54 usage_00287.pdb 53 --AD 54 usage_00288.pdb 45 --AD 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################