################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:13 2021 # Report_file: c_0791_59.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00347.pdb # 2: usage_00363.pdb # 3: usage_00501.pdb # 4: usage_00502.pdb # 5: usage_00587.pdb # 6: usage_00722.pdb # 7: usage_00723.pdb # 8: usage_00724.pdb # 9: usage_00725.pdb # 10: usage_00726.pdb # 11: usage_00796.pdb # 12: usage_01036.pdb # 13: usage_01037.pdb # # Length: 129 # Identity: 20/129 ( 15.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/129 ( 65.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/129 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00347.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 usage_00363.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLYLMPLFKCPE--- 44 usage_00501.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 usage_00502.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLYLMPLFKCPE--- 44 usage_00587.pdb 1 --VIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNE 58 usage_00722.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLYLMPLFKCPE--- 44 usage_00723.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLYLMPLFKCPE--- 44 usage_00724.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 usage_00725.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 usage_00726.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 usage_00796.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLYLMPLFKCPE--- 44 usage_01036.pdb 1 --VGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 42 usage_01037.pdb 1 KQVGGVCYVDLFA-------------GDLKGLKDKIPYFQELGLTYLHLMPLFKCPE--- 44 VggvcyVdlFa GdlkglkdKipYfqeLGlTyl LmPlfkcpe usage_00347.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00363.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00501.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00502.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00587.pdb 59 LKNHERLSDYASSNSNY-NWGYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGM 117 usage_00722.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00723.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00724.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00725.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00726.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_00796.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 usage_01036.pdb 43 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 79 usage_01037.pdb 45 ---------------GKSDGGYAVSSYRDVNPALG--------TIGDLREVIAALHEAGI 81 gk dgGYavssYrdvnpalg tIgdlrevIaalHeaGi usage_00347.pdb 82 SAVVDFIFN 90 usage_00363.pdb 82 SAVVDFIFN 90 usage_00501.pdb 82 SAVVDFIF- 89 usage_00502.pdb 82 SAVVDFIFN 90 usage_00587.pdb 118 GAILDVVYN 126 usage_00722.pdb 82 SAVVDFIFN 90 usage_00723.pdb 82 SAVVDFIFN 90 usage_00724.pdb 82 SAVVDFIF- 89 usage_00725.pdb 82 SAVVDFIF- 89 usage_00726.pdb 82 SAVVDFIFN 90 usage_00796.pdb 82 SAVVDFIFN 90 usage_01036.pdb 80 SAVVDFIFN 88 usage_01037.pdb 82 SAVVDFIFN 90 sAvvDfif #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################