################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:11 2021 # Report_file: c_1484_231.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00096.pdb # 2: usage_00097.pdb # 3: usage_03452.pdb # 4: usage_03453.pdb # # Length: 94 # Identity: 53/ 94 ( 56.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 94 ( 56.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 94 ( 39.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 ----DPHAMRDMAGRFEVHAQTVEDEARRMWASAQ---------------LDTMAQMNQA 41 usage_00097.pdb 1 -----PHAMRDMAGRFEVHAQTVEDEARRMWASAQ--------ATS----LDTMAQMNQA 43 usage_03452.pdb 1 -PHA------RDAGRFEVHAQTVEDEARRW-ASAQNISSGAEA-TSLDTA------QNQA 45 usage_03453.pdb 1 DPHA------RDAGRFEVHAQTVEDEARRW-ASAQ-----------T--A------QNQA 34 AGRFEVHAQTVEDEARR ASAQ NQA usage_00096.pdb 42 FRNIVNMLHGVRDGLVRDANNYEQQEQASQ---- 71 usage_00097.pdb 44 FRNIVNMLHGVRDGLVRDANNYEQQEQASQQ--- 74 usage_03452.pdb 46 FRNIVN-LHGVRDGLVRDANNYEQQEQASQQILS 78 usage_03453.pdb 35 FRNIVN-LHGVRDGLVRDANNYEQQEQASQQILS 67 FRNIVN LHGVRDGLVRDANNYEQQEQASQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################