################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:08:29 2021 # Report_file: c_0147_8.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00042.pdb # 2: usage_00050.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00111.pdb # 6: usage_00177.pdb # 7: usage_00223.pdb # 8: usage_00224.pdb # 9: usage_00275.pdb # 10: usage_00300.pdb # 11: usage_00301.pdb # 12: usage_00302.pdb # 13: usage_00303.pdb # 14: usage_00350.pdb # 15: usage_00351.pdb # 16: usage_00356.pdb # 17: usage_00360.pdb # 18: usage_00381.pdb # 19: usage_00400.pdb # 20: usage_00419.pdb # 21: usage_00463.pdb # 22: usage_00464.pdb # 23: usage_00465.pdb # 24: usage_00472.pdb # 25: usage_00487.pdb # 26: usage_00505.pdb # 27: usage_00591.pdb # 28: usage_00592.pdb # 29: usage_00593.pdb # 30: usage_00594.pdb # 31: usage_00641.pdb # 32: usage_00642.pdb # 33: usage_00646.pdb # 34: usage_00652.pdb # 35: usage_00655.pdb # 36: usage_00664.pdb # 37: usage_00702.pdb # 38: usage_00714.pdb # # Length: 127 # Identity: 29/127 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/127 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/127 ( 12.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 -QLQQSGPELVKPGASVKISCKDSGYAFNSSWMNWVKQRPGQGLEWIGRIYPGDGDSNYN 59 usage_00050.pdb 1 --LQQSGAELMKPGASVKISCKASGYTFSDYWIEWVKQRPGHGLEWIGEILPGSGSTNYH 58 usage_00073.pdb 1 VQLEQSGAELMKPGASVKISCKATGYTFTTYWIEWIKQRPGHSLEWIGEILPGSDSTYYN 60 usage_00074.pdb 1 VQLEQSGAELMKPGASVKISCKATGYTFTTYWIEWIKQRPGHSLEWIGEILPGSDSTYYN 60 usage_00111.pdb 1 -KLQESGGEVVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGDTNYN 59 usage_00177.pdb 1 AQLQQSGAELMKPGASVKISCKATGYTFSNYWIDWIKQRPGHGLEWIGEILPGSGSTNYN 60 usage_00223.pdb 1 VHLQQSGAELMKPGASVKISCKATGYTFTSYWIEWVKQRPGHGLEWLGEILPGSGYIHYN 60 usage_00224.pdb 1 VHLQQSGAELMKPGASVKISCKATGYTFTSYWIEWVKQRPGHGLEWLGEILPGSGYIHYN 60 usage_00275.pdb 1 VHLQQSGAELMKPGASVKISCKASGYTFITYWIEWVKQRPGHGLEWIGDILPGSGSTNYN 60 usage_00300.pdb 1 -QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYN 59 usage_00301.pdb 1 -QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYN 59 usage_00302.pdb 1 -QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYN 59 usage_00303.pdb 1 -QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYN 59 usage_00350.pdb 1 VQLQQSGPELVKPGTSVKMPCKASGYIFTDYVISWVKQRTGQGLEWIGEIFPRSGSTYYN 60 usage_00351.pdb 1 VQLQQSGPELVKPGTSVKMPCKASGYIFTDYVISWVKQRTGQGLEWIGEIFPRSGSTYYN 60 usage_00356.pdb 1 VQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYYN 60 usage_00360.pdb 1 MQLQQSGAELLRPGTSVKLSCKTSGYIFTSYWIHWVKQRSGQGLEWIARIYPGTGSTYYN 60 usage_00381.pdb 1 VQLQQSGSELMKPGASVQISCKATGYTFSDYWIEWVKQRPGHGLEWIGDILCGTGRTRYN 60 usage_00400.pdb 1 VQLQQSGPELMKPGASVKISCKATGYTFSTSWIEWIKQRPGHGLEWIGEVLPGSGKSNHN 60 usage_00419.pdb 1 -KLQQSGPEVVKPGASVKISCKASGYSFTNFYIHWVKQRPGQGLEWIGWIFHGSDNTEYN 59 usage_00463.pdb 1 VQLKQSGAELMKPGASVKISCKATGYKFSSYWIEWVKQRPGHGLEWIGEIFPGSGNTNYN 60 usage_00464.pdb 1 VQLKQSGAELMKPGASVKISCKATGYKFSSYWIEWVKQRPGHGLEWIGEIFPGSGNTNYN 60 usage_00465.pdb 1 VQLKQSGAELMKPGASVKISCKATGYKFSSYWIEWVKQRPGHGLEWIGEIFPGSGNTNYN 60 usage_00472.pdb 1 VQLEESGPELVKPGALVKISCKASGYTFTTYDINWVKQRPGQGLEWIGWIYPGDGSNKYN 60 usage_00487.pdb 1 VQLQQSGTELMKPGSSVKISCKATGYRFSSYWVEWVKQRPGHGLEWIGKILPGIGSTSYN 60 usage_00505.pdb 1 -QLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGRIYPGYGNTKYN 59 usage_00591.pdb 1 VQLQQSGTELKKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPEIGMTNYN 60 usage_00592.pdb 1 VQLQQSGTELKKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPEIGMTNYN 60 usage_00593.pdb 1 VQLQQSGTELKKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPEIGMTNYN 60 usage_00594.pdb 1 VQLQQSGTELKKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPEIGMTNYN 60 usage_00641.pdb 1 VKLHESGAGLVKPGASVEISCKATGYTFSSFWIEWVKQRPGHGLEWIGEILPGRGRTNYN 60 usage_00642.pdb 1 VKLHESGAGLVKPGASVEISCKATGYTFSSFWIEWVKQRPGHGLEWIGEILPGRGRTNYN 60 usage_00646.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGDTIFN 60 usage_00652.pdb 1 GQLQQSGAELVRPGSSVKISCKASGYAFSSFWVNWVKQRPGQGLEWIGQIYPGDGDNKYN 60 usage_00655.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYN 60 usage_00664.pdb 1 VHLQQSGAELMKPGASVKISCKATGYTFTSYWIEWVKQRPGHGLEWLGEILPGSGYIHYN 60 usage_00702.pdb 1 VQLQQSGDDLVKPGASVKLSCKASGYTFTTYYINWMRQRPGQGLEWIGRIAPASGTTYSS 60 usage_00714.pdb 1 VKLQQSGAELARPGTSVKLSCKASGYTFTNYWMQWIKQRPGQGLEWIGAVYPGDGDTRFS 60 L SG PG sV CK GY F W kQr G LEW g usage_00042.pdb 60 GKFEGKAILTADKSSSTAYMQLSSLTSVDSAVYFCARSGLL-R-------YAM--DYWGQ 109 usage_00050.pdb 59 ERFKGKATFTADTSSSTAYMQLNSLTSEDSGVYYCLHGN-----------YDF--DGWGQ 105 usage_00073.pdb 61 EKVKGKVTFTADASSNTAYMQLSSLTSEDSAVYYCARGD-----------GFY--VYWGQ 107 usage_00074.pdb 61 EKVKGKVTFTADASSNTAYMQLSSLTSEDSAVYYCARGD-----------GFY--VYWGQ 107 usage_00111.pdb 60 EKFKGKATLTADKSSSTAYMQLNSLTSDDSAVYFCARSGAAAPT---Y--YAM--DYWGQ 112 usage_00177.pdb 61 EKFRGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRRGYW-A-------YDF--DYWGQ 110 usage_00223.pdb 61 EKFKGKATFTTDTSSNTAYMQLSSLTSEDSAVYYCSRALAL---------YAM--DYWGQ 109 usage_00224.pdb 61 EKFKGKATFTTDTSSNTAYMQLSSLTSEDSAVYYCSRALAL---------YAM--DYWGQ 109 usage_00275.pdb 61 ENFKGKATFTADSSSNTAYMQLSSLTSEDSAVYYCARSGYY-G----N--SGF--AYWGQ 111 usage_00300.pdb 60 GKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGG---V--YAM--DYWGQ 112 usage_00301.pdb 60 GKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGG---V--YAM--DYWGQ 112 usage_00302.pdb 60 GKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGG---V--YAM--DYWGQ 112 usage_00303.pdb 60 GKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGG---V--YAM--DYWGQ 112 usage_00350.pdb 61 EKFKGKATLTADKSSNTAYMQLSSVTSEDSAVYFCARDYYG-T----S--FAM--DYWGQ 111 usage_00351.pdb 61 EKFKGKATLTADKSSNTAYMQLSSVTSEDSAVYFCARDYYG-T----S--FAM--DYWGQ 111 usage_00356.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGD-----------GNY--GYWGQ 107 usage_00360.pdb 61 EKFKGKATLTADKSSSTAYMQLSTLKSEDSAVYFCTRWGF-IPV---R--EDYVMDYWGQ 114 usage_00381.pdb 61 EKLKAMATFTADTSSNTAFMQLSSLTSEDSAVYYCARSASY-G-------DYA--DYWGH 110 usage_00400.pdb 61 ANFKGRATFTADTASNTAYMQLSSLTSEDSAVYYCAREGSN-N-------NAL--AYWGQ 110 usage_00419.pdb 60 EKFKDKATLTADTSSSTAYMQLSSLTSEDSAVYFCARWGPH---------WYF--DVWGQ 108 usage_00463.pdb 61 EKFKGKATLTADTSSNTAYMQLSSLTSEDSAVYYCARRGAFYSYGSSY--YAM--DFWGQ 116 usage_00464.pdb 61 EKFKGKATLTADTSSNTAYMQLSSLTSEDSAVYYCARRGAFYSYGSSY--YAM--DFWGQ 116 usage_00465.pdb 61 EKFKGKATLTADTSSNTAYMQLSSLTSEDSAVYYCARRGAFYSYGSSY--YAM--DFWGQ 116 usage_00472.pdb 61 EKFKDKATLTVDKSSSTAYMHLSSLTSENSAVYFCARGYGK-N----V--YAM--DYWGQ 111 usage_00487.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGYYG-P-------TWF--AYWGQ 110 usage_00505.pdb 60 DKFKGKATLTEDTSSNTAYMQLNSLTSEDTAVYFCARSL-----------TFF--DVWGA 106 usage_00591.pdb 61 ENFKGKATFTANTSSNTVYMQLSSLTSEDSAVYYCARPYDY---------SWF--AYWGQ 109 usage_00592.pdb 61 ENFKGKATFTANTSSNTVYMQLSSLTSEDSAVYYCARPYDY---------SWF--AYWGQ 109 usage_00593.pdb 61 ENFKGKATFTANTSSNTVYMQLSSLTSEDSAVYYCARPYDY---------SWF--AYWGQ 109 usage_00594.pdb 61 ENFKGKATFTANTSSNTVYMQLSSLTSEDSAVYYCARPYDY---------SWF--AYWGQ 109 usage_00641.pdb 61 EKFKGKATFTAETSSNTAYMQLSSLTSEDSAVYYCATGNTM---------VNM--PYWGQ 109 usage_00642.pdb 61 EKFKGKATFTAETSSNTAYMQLSSLTSEDSAVYYCATGNTM---------VNM--PYWGQ 109 usage_00646.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARWVLD-Y-------YGM--DYWGQ 110 usage_00652.pdb 61 GKFKGKATLTADKSSTTAYMQLYSLTSEDSAVYFCARSGNY-P-------YAM--DYWGQ 110 usage_00655.pdb 61 ERFKGKASFTADSSSNTAYMQLSSLTSEDSAVYYCTRTSYYFG--SS---YDF--DVWGA 113 usage_00664.pdb 61 EKFKGKATFTTDTSSNTAYMQLSSLTSEDSAVYYCSRALAL---------YAM--DYWGQ 109 usage_00702.pdb 61 EMFKDKATLTVDTSSNTAYIQLSSLSSEDSAVYFCARADYGFN--SG---EAM--DYWGQ 113 usage_00714.pdb 61 QKFKGKATLTADKSSSTAYMQLSSLSSEDSAVYFCARRRVYYGS---NYIYAL--DYWGQ 115 T sS T mq s S dsaVY C WG usage_00042.pdb 110 GTSVTVS 116 usage_00050.pdb 106 GTTLTVS 112 usage_00073.pdb 108 GTTLTVS 114 usage_00074.pdb 108 GTTLTVS 114 usage_00111.pdb 113 GVSVTVS 119 usage_00177.pdb 111 GTTLTVS 117 usage_00223.pdb 110 GTSVTV- 115 usage_00224.pdb 110 GTSVTV- 115 usage_00275.pdb 112 GTLVTVS 118 usage_00300.pdb 113 GTSVTVS 119 usage_00301.pdb 113 GTSVTVS 119 usage_00302.pdb 113 GTSVTVS 119 usage_00303.pdb 113 GTSVTVS 119 usage_00350.pdb 112 GTSVTVS 118 usage_00351.pdb 112 GTSVTVS 118 usage_00356.pdb 108 GTTLTVS 114 usage_00360.pdb 115 GTLVTVS 121 usage_00381.pdb 111 GTTLTVS 117 usage_00400.pdb 111 GTLVTVS 117 usage_00419.pdb 109 GTTVTVS 115 usage_00463.pdb 117 GTSVTVS 123 usage_00464.pdb 117 GTSVTVS 123 usage_00465.pdb 117 GTSVTVS 123 usage_00472.pdb 112 GTSVTVS 118 usage_00487.pdb 111 GTLVTVS 117 usage_00505.pdb 107 GTTVTV- 112 usage_00591.pdb 110 GTLVTVS 116 usage_00592.pdb 110 GTLVTV- 115 usage_00593.pdb 110 GTLVTVS 116 usage_00594.pdb 110 GTLVTVS 116 usage_00641.pdb 110 GTTVTV- 115 usage_00642.pdb 110 GTTVTV- 115 usage_00646.pdb 111 GTSLTVS 117 usage_00652.pdb 111 GTSVTVS 117 usage_00655.pdb 114 GTTVTVS 120 usage_00664.pdb 110 GTSVTV- 115 usage_00702.pdb 114 GTSVTVS 120 usage_00714.pdb 116 GTSVTV- 121 Gt TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################