################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:27 2021 # Report_file: c_1387_130.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01575.pdb # 2: usage_01876.pdb # 3: usage_02162.pdb # 4: usage_02163.pdb # 5: usage_02164.pdb # 6: usage_02192.pdb # 7: usage_02549.pdb # # Length: 79 # Identity: 6/ 79 ( 7.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 79 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 79 ( 58.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01575.pdb 1 ---------------ESILDELEEVLLVSDFGPKTALKIVDTIRKDILAGRLK----SGP 41 usage_01876.pdb 1 --------------DDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLR----DAE 42 usage_02162.pdb 1 HVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSG---------- 50 usage_02163.pdb 1 HVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSG---------- 50 usage_02164.pdb 1 -----------------VIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEE 43 usage_02192.pdb 1 --------------TDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLK----SGS 42 usage_02549.pdb 1 --------------TDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLK----SGS 42 ELee LL sD g t I l usage_01575.pdb 42 QIKEALKKNIFKLLTERV- 59 usage_01876.pdb 43 ALYGLLKEEMGEILAK-VD 60 usage_02162.pdb ------------------- usage_02163.pdb ------------------- usage_02164.pdb 44 IVINTLKKSITEIL----- 57 usage_02192.pdb 43 EIKDALKESVLEML----- 56 usage_02549.pdb 43 EIKDALKESVLEMLA---- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################