################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:58 2021 # Report_file: c_0868_33.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00102.pdb # 6: usage_00112.pdb # 7: usage_00193.pdb # 8: usage_00331.pdb # 9: usage_00342.pdb # # Length: 101 # Identity: 8/101 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/101 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/101 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 --------VEYGAACFAGEQ---------AG-HFY-----SR----------ISNPTLNL 27 usage_00037.pdb 1 --------VEYGAACFAGEQ---------AG-HFY-----SR----------ISNPTLNL 27 usage_00068.pdb 1 ---------GFATRAIHH-GYDPQDHGGALV-PPVYQTA--TFTFPTV-E---SNPTLNL 43 usage_00069.pdb 1 ---------GFATRAIHH-GYDPQDHGGALV-PPVYQTA--TFTF-PTVE--ISNPTLNL 44 usage_00102.pdb 1 -------SAEQGAARF-----------------------YTR----------LGNPTTDA 20 usage_00112.pdb 1 HPDVLDGGVEALRTWG-------------GGAGGS---R--L--------VTGNTELHEA 34 usage_00193.pdb 1 ---------EQGGRRFAGEE---------SG-YIY-----SR----------LGNPTSTE 26 usage_00331.pdb 1 -------TVEYGAACFAGEQ---------AG-HFY-----SR----------ISNPTLNL 28 usage_00342.pdb 1 -------SAEQGAARF------------------------------------LGNPTTDA 17 npt usage_00036.pdb 28 LEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLG 68 usage_00037.pdb 28 LEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLG 68 usage_00068.pdb 44 LEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLG 84 usage_00069.pdb 45 LEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLG 85 usage_00102.pdb 21 LEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSA 61 usage_00112.pdb 35 FEHQLASFLGAESALVFSSGYTANLGALVALSGPGSLIVSD 75 usage_00193.pdb 27 VENKLALLEGGEAAVVAASGMGAIAASLWSALKSGDHVVAS 67 usage_00331.pdb 29 LEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLG 69 usage_00342.pdb 18 LEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSA 58 E A le gEa l aSG Ai L l Gd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################