################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:06 2021 # Report_file: c_0934_31.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00035.pdb # 9: usage_00036.pdb # 10: usage_00037.pdb # 11: usage_00094.pdb # 12: usage_00691.pdb # # Length: 71 # Identity: 34/ 71 ( 47.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 71 ( 50.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 71 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00029.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00030.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00031.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00032.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00033.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00034.pdb 1 GVQELSVYEINERDRGSPVILPFGGKKDE-NGAHANSLGDLVPFSNKVYDGSLQRRLGIT 59 usage_00035.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSLKTRLGIT 60 usage_00036.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKK-----AHVNSLGDLVPFSNKIYDGSLKTRLGIT 55 usage_00037.pdb 1 HVQELFVYEINERDRGSPVFLPFGGKK-----QHVNSLGDLVPFSNKIYDGSLKTRLGIT 55 usage_00094.pdb 1 KVQELSVYEINELDRHSPKILKNAFSL--------FGLGDLVPFTNKLYTGDLKKRVGIT 52 usage_00691.pdb 1 --QELSVYEINELDRHSPKILKNAFSL-------MFGLGDLVPFTNKLYTGDLKKRVGIT 51 QEL VYEINE DR SP L LGDLVPF NK Y G Lk R GIT usage_00028.pdb 61 AGLCTLIS--- 68 usage_00029.pdb 61 AGLCTLIS--- 68 usage_00030.pdb 61 AGLCTLIS--- 68 usage_00031.pdb 61 AGLCTLIS--- 68 usage_00032.pdb 61 AGLCTLIS--- 68 usage_00033.pdb 61 AGLCTLIS--- 68 usage_00034.pdb 60 AGICTLISHNA 70 usage_00035.pdb 61 AGLCTLIS--- 68 usage_00036.pdb 56 AGLCTLIS--- 63 usage_00037.pdb 56 AGLCTLIS--- 63 usage_00094.pdb 53 AGLCVVIE--- 60 usage_00691.pdb 52 AGLCVVIE--- 59 AGlC I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################