################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:44 2021 # Report_file: c_1089_44.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00333.pdb # 2: usage_00717.pdb # 3: usage_01007.pdb # 4: usage_01024.pdb # 5: usage_01115.pdb # # Length: 87 # Identity: 17/ 87 ( 19.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 87 ( 86.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 87 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00333.pdb 1 ATDSIKNTIYITAKQNPVTPPELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDID--- 57 usage_00717.pdb 1 ATDSMKNFIQKHLASYTGTTIEGFLEYVATSFLKKYSHIEKISLIGEEI--PFETTFAVK 58 usage_01007.pdb 1 -TDSIKNTIYITAKQNPVTPPELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDID--- 56 usage_01024.pdb 1 ATDSIKNTIYITAKQNPVTPPELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDID--- 57 usage_01115.pdb 1 ATDSIKNTIYITAKQNPVTPPELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDID--- 57 TDSiKNtIyitakqnpvTppElFgsilgThFieKYnHIhaahvnivch trmdid usage_00333.pdb 58 ---GKPHPHSFIRDSEEKRNVQVDVVE 81 usage_00717.pdb 59 NGNRAASELVFKKSRNEYATAYLNMVR 85 usage_01007.pdb 57 ---GKPHPHSFIRDSEEKRNVQVD--- 77 usage_01024.pdb 58 ---GKPHPHSFIRDSEEKRNVQVDVVE 81 usage_01115.pdb 58 ---GKPHPHSFIRDSEEKRNVQVD--- 78 gkphphsFirdseEkrnvqvd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################