################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:16 2021 # Report_file: c_0635_8.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00005.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # # Length: 125 # Identity: 34/125 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/125 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/125 ( 11.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GAGNVTKLANQVIVALNIAA-SEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPV-D 58 usage_00009.pdb 1 -DGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL-GGFASSRILEVHGERIN 58 usage_00010.pdb 1 --GQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL-GGFASSRILEVHGERIN 57 usage_00016.pdb 1 GSGQLTKLANQ-IVGITIGAVAEALLFATKGGAD-AKVKEAITGGFADSRVLQLHGQRVE 58 usage_00017.pdb 1 -SGQLTKLANQ-IVGITIGAVAEALLFATKGGAD-AKVKEAITGGFADSRVLQLHGQRVE 57 Gq K ANQ IV I A EAL fA K Gad V A GGfA Sr L hg r usage_00005.pdb 59 RNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAV-E--QALRADGHGNDDHSALACYY 115 usage_00009.pdb 59 RTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSA-VQAL 117 usage_00010.pdb 58 RTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSA-VQAL 116 usage_00016.pdb 59 RDFAPRARLSIQLKD-RNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVEL 117 usage_00017.pdb 58 RDFAPRARLSIQLKD-RNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVEL 116 R F P KD AL a P T G lD S l usage_00005.pdb 116 EKLA- 119 usage_00009.pdb 118 ELA-- 120 usage_00010.pdb 117 ELA-- 119 usage_00016.pdb 118 ASR-- 120 usage_00017.pdb 117 ASRNG 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################