################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:55 2021 # Report_file: c_0545_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00078.pdb # 2: usage_00080.pdb # 3: usage_00603.pdb # 4: usage_00787.pdb # 5: usage_00946.pdb # # Length: 132 # Identity: 19/132 ( 14.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/132 ( 72.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/132 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 -YDKAVDCFTAAL-----SVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 54 usage_00080.pdb 1 -YDKAVDCFTAAL-----SVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 54 usage_00603.pdb 1 AVDRGTELLERSLADAPD-----NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFN 55 usage_00787.pdb 1 ------------------SVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 42 usage_00946.pdb 1 -YDKAVDCFTAAL-----SVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 54 dyllwnkLGaTlangnqseeAVaayrralElqPgyir usage_00078.pdb 55 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 114 usage_00080.pdb 55 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 114 usage_00603.pdb 56 VRFRLGVALDNLGRFDEAIDSFKIALGLRP-----------NEGKVHRAIAFSYEQMGRH 104 usage_00787.pdb 43 SRYNLGISCINLGAHREAVEHFLEALNMQRKS-------GAMSENIWSTLRLALSMLGQS 95 usage_00946.pdb 55 SRYNLGISCINLGAHREAVEHFLEALNMQRKSR-----GGAMSENIWSTLRLALSMLGQS 109 sRynLGisciNLGahrEAvehFleALnmqr mseniwstlrlalsmlGqs usage_00078.pdb 115 DAYGAADAR--- 123 usage_00080.pdb 115 DAYGAADAR--- 123 usage_00603.pdb 105 EEALPHFKKANE 116 usage_00787.pdb 96 DAYGAADAR--- 104 usage_00946.pdb 110 DAYGAADAR--- 118 daygaadar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################