################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:32 2021 # Report_file: c_1480_44.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00900.pdb # 2: usage_02232.pdb # 3: usage_02233.pdb # 4: usage_02312.pdb # 5: usage_02313.pdb # 6: usage_02314.pdb # # Length: 40 # Identity: 7/ 40 ( 17.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 40 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 40 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00900.pdb 1 --PDFSSKLMGYDTF-DQFTEERRSSILTETLRRF----- 32 usage_02232.pdb 1 -TLFLQTLSW---EIDDQVGIEVRNELLREVGRGMGTRIM 36 usage_02233.pdb 1 -TLFLQTLSW---EIDDQVGIEVRNELLREVGRGMGTRI- 35 usage_02312.pdb 1 -TLFLQTLSW---EIDDQVGIEVRNELLREVGRGGTRI-- 34 usage_02313.pdb 1 FTLFLQTLSW---EIDDQVGIEVRNELLREVGRGGTRI-- 35 usage_02314.pdb 1 FTLFLQTLSW---EIDDQVGIEVRNELLREVGRGGTRI-- 35 lflqtlsw ei DQvgiEvRnelLrEvgRg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################