################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:11:30 2021 # Report_file: c_0121_15.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00008.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00107.pdb # 7: usage_00108.pdb # 8: usage_00123.pdb # 9: usage_00146.pdb # 10: usage_00148.pdb # 11: usage_00149.pdb # 12: usage_00152.pdb # 13: usage_00153.pdb # 14: usage_00174.pdb # 15: usage_00175.pdb # 16: usage_00176.pdb # 17: usage_00181.pdb # 18: usage_00243.pdb # 19: usage_00252.pdb # 20: usage_00267.pdb # 21: usage_00268.pdb # 22: usage_00275.pdb # 23: usage_00316.pdb # 24: usage_00449.pdb # 25: usage_00484.pdb # # Length: 124 # Identity: 46/124 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/124 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/124 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --QLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 58 usage_00059.pdb 1 -VQLLESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 59 usage_00060.pdb 1 -VQLLESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 59 usage_00078.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGSTYYN 58 usage_00079.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGSTYYN 58 usage_00107.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00108.pdb 1 --KLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVSWVRQPPGKGLEWLGVIWGDGNTTYH 58 usage_00123.pdb 1 -VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00146.pdb 1 --KLLESGPGLVAPSESLSITCTISGFSLTDDGVSWIRQPPGKGLEWLGVIWGGGSTYFN 58 usage_00148.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 58 usage_00149.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 58 usage_00152.pdb 1 -VMLVESGPGLVAPSQSLSITCTVSGFSLSDYGVSWIRQPPGKGLEWLGVIWGDGSTYYA 59 usage_00153.pdb 1 -VMLVESGPGLVAPSQSLSITCTVSGFSLSDYGVSWIRQPPGKGLEWLGVIWGDGSTYYA 59 usage_00174.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00175.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00176.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00181.pdb 1 --HLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVHWFRQPPGKGLEWLGLIWAGGNTDYN 58 usage_00243.pdb 1 --QLKESGPVLVAPSQSLFISCTVSGFSLTRYGVHWVRQSPGKGLEWLGVIWAGGTTNYN 58 usage_00252.pdb 1 -VQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00267.pdb 1 QVQLVESGPGLVAPSQSLSITCTVSGISLSRYNVHWVRQSPGKGLEWLGMIWGGGSIEYN 60 usage_00268.pdb 1 QVQLVESGPGLVAPSQSLSITCTVSGISLSRYNVHWVRQSPGKGLEWLGMIWGGGSIEYN 60 usage_00275.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00316.pdb 1 --QLKQSGPGLVAPSQSLSITCTVSGFSLTGYSVIWVRQSPGKGLEWLGMIWGDGRTEYK 58 usage_00449.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 59 usage_00484.pdb 1 -VKLLESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYN 59 L SGPgLVaPSqsLsitCTvSG L V W RQ PGKGLEW g Iw G y usage_00008.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD-----YRL--DYWGQ-GTTV 110 usage_00059.pdb 60 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWGGYYIPYGM--DHWGQ-GTTV 116 usage_00060.pdb 60 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWGGYYIPYGM--DHWGQ-GTTV 116 usage_00078.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAKP----------G-DSWGQ-GTSV 106 usage_00079.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAKH----------T-DSWGQ-GTSV 106 usage_00107.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD-----YRL--DYWGQ-GTTL 111 usage_00108.pdb 59 SALISRLSISKDNSRSQVFLKLNSLHTDDTATYYCAGNYY------GM--DYWGQ-GTSV 109 usage_00123.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD-----YRL--DYWGQ-GTTL 111 usage_00146.pdb 59 SLFKSRLSITRDNSKSQVFLEMDSLQTDDTAMYYCAKHDG-----HET--MDYWGQGTSV 111 usage_00148.pdb 59 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWGGYYIPYGM--DHWGQ-GTTV 115 usage_00149.pdb 59 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWGGYYIPYGM--DHWGQ-GTTV 115 usage_00152.pdb 60 SALKFRLTISKDSSKSQVFLNMHSLQTDDSAMYYCAKHTY-----GGP--GDSWGQGTSV 112 usage_00153.pdb 60 SALKFRLTISKDSSKSQVFLNMHSLQTDDSAMYYCAKHTY-----GGP--GDSWGQGTSV 112 usage_00174.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY-----GSKPMDYWGQ-GTSV 113 usage_00175.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY-----GSKPMDYWGQ-GTSV 113 usage_00176.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY-----GSKPMDYWGQ-GTSV 113 usage_00181.pdb 59 SALMSRLSINKDNSKSQVFLKMNSLQADDTAMYYCARFRFASYYDYAV--DYWGQ-GTSV 115 usage_00243.pdb 59 SAFMSRLTISKDNSKSQVFLKMNSLQTDDTAIYYCVKAYR-----NAM--DYWGQ-GTSV 110 usage_00252.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD-----YRL--DYWGQ-GTTL 111 usage_00267.pdb 61 PALKSRLSISKDNSKSQIFLKMNSLQTDDSAMYYCVSYGYGG----DRF-SYWGQ-GTLV 114 usage_00268.pdb 61 PALKSRLSISKDNSKSQIFLKMNSLQTDDSAMYYCVSYGYGG----DRF-SYWGQ-GTLV 114 usage_00275.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY-----GSKPMDYWGQ-GTSV 113 usage_00316.pdb 59 SALKSRLSITKDNSKSQVFLKMNSLQTDDTARYFCASDSM-----DPGSFAYWGQ-GTLV 112 usage_00449.pdb 60 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY-----GSKPMDYWGQ-GTSV 113 usage_00484.pdb 60 SALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDG-----WNY--FDYWGPGTMV 112 a RL I D SkSQ FL m SL tdD A Y C GT usage_00008.pdb 111 TV-- 112 usage_00059.pdb 117 TV-- 118 usage_00060.pdb 117 TV-- 118 usage_00078.pdb 107 TV-- 108 usage_00079.pdb 107 TVS- 109 usage_00107.pdb 112 TVS- 114 usage_00108.pdb 110 TVS- 112 usage_00123.pdb 112 TVSS 115 usage_00146.pdb 112 TV-- 113 usage_00148.pdb 116 TVS- 118 usage_00149.pdb 116 TVS- 118 usage_00152.pdb 113 TVS- 115 usage_00153.pdb 113 TVS- 115 usage_00174.pdb 114 TV-- 115 usage_00175.pdb 114 TV-- 115 usage_00176.pdb 114 TV-- 115 usage_00181.pdb 116 TVS- 118 usage_00243.pdb 111 TVS- 113 usage_00252.pdb 112 TVSS 115 usage_00267.pdb 115 TVS- 117 usage_00268.pdb 115 TVS- 117 usage_00275.pdb 114 TV-- 115 usage_00316.pdb 113 TVS- 115 usage_00449.pdb 114 TV-- 115 usage_00484.pdb 113 TV-- 114 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################