################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:14 2021 # Report_file: c_1387_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00315.pdb # 2: usage_01109.pdb # 3: usage_01110.pdb # 4: usage_01471.pdb # 5: usage_01525.pdb # 6: usage_01621.pdb # 7: usage_01765.pdb # 8: usage_01766.pdb # 9: usage_01850.pdb # 10: usage_01993.pdb # 11: usage_02141.pdb # 12: usage_02161.pdb # 13: usage_02286.pdb # # Length: 106 # Identity: 26/106 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/106 ( 38.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 57/106 ( 53.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00315.pdb 1 TAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPL--Q--SR------DARQQRFAHFTEL 50 usage_01109.pdb 1 SPEQLGMIEKLVAAQQ-----------RVTPWP---PH-SR------EARQQRFAHFTEL 39 usage_01110.pdb 1 SPEQLGMIEKLVAAQQ------------VTPW--------R------EARQQRFAHFTEL 34 usage_01471.pdb 1 TAAQELMIQQLVAAQLQCNKR-------------------------------SFAHFTEL 29 usage_01525.pdb 1 --------EDLKRISN-------------------------TPSEGEDQSDLNFRHITEI 27 usage_01621.pdb 1 TAAQELMIQQLVAAQLQSNKRSFSDQPKVTPWPLGADPQSR------DARQQRFAHFTEL 54 usage_01765.pdb 1 SPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPIAPDPQSR------EARQQRFAHFTEL 54 usage_01766.pdb 1 -PEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPIAPDPQSR------EARQQRFAHFTEL 53 usage_01850.pdb 1 TAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP--------------DARQQRFAHFTEL 46 usage_01993.pdb 1 TAAQELMIQQLVAAQLQCNKR-----PKVTPWPL-------------DARQQRFAHFTEL 42 usage_02141.pdb 1 TAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP---PQ-SR------DARQQRFAHFTEL 50 usage_02161.pdb 1 TAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPASG------SASQQRFAHFTEL 54 usage_02286.pdb 1 TAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP-------R------DARQQRFAHFTEL 47 Lvaaq FaHfTEl usage_00315.pdb 51 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 83 usage_01109.pdb 40 AIVSVQEIVDFAKQLPGFLQLSREDQIALLKTS------------- 72 usage_01110.pdb 35 AIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 80 usage_01471.pdb 30 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 62 usage_01525.pdb 28 TILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMLRMARRY 73 usage_01621.pdb 55 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 87 usage_01765.pdb 55 AIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA------------ 88 usage_01766.pdb 54 AIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA------------ 87 usage_01850.pdb 47 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 79 usage_01993.pdb 43 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 75 usage_02141.pdb 51 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 83 usage_02161.pdb 55 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAST------------ 88 usage_02286.pdb 48 AIISVQEIVDFAKQVPGFLQLGREDQIALLKAS------------- 80 aI sVQeIVdFAKq PGFlqL REDQIALLK s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################