################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:29 2021 # Report_file: c_0484_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00033.pdb # 4: usage_00112.pdb # 5: usage_00113.pdb # 6: usage_00175.pdb # 7: usage_00301.pdb # 8: usage_00302.pdb # # Length: 86 # Identity: 11/ 86 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 86 ( 43.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 86 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -KAL-IVTDKTLVQCGVVAKVTDKMDAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 56 usage_00021.pdb 1 QKAL-IVTDKTLVQCGVVAKVTDKMDAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 57 usage_00033.pdb 1 -RVLITYGGGSVKKTGVLDQVLDALK----GMDVLEFGGIEPNPAYETLMNAVKLVREQK 55 usage_00112.pdb 1 QKAL-IVTDKTLVQCGVVAKVTDK-DAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 56 usage_00113.pdb 1 QKAL-IVTDKTLVQCGVVAKVTDK-DAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 56 usage_00175.pdb 1 -RAF-IVTDPGMVKLGYVDKVLYYLRRRPDYVHSEIFSEVEPDPSIETVMKGVDMMRSFE 58 usage_00301.pdb 1 -KAL-IVTDKTLVQCGVVAKVTDKMDAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 56 usage_00302.pdb 1 QKAL-IVTDKTLVQCGVVAKVTDKMDAA--GLAWAIYDGVVPNPTITVVKEGLGVFQNSG 57 al ivtd v Gvv kV d g i gv PnP i v g usage_00020.pdb 57 ADYLIAIGGGSPQDTCKAIGIISNNP 82 usage_00021.pdb 58 ADYLIAIGGGSPQDTCKAIGIISNNP 83 usage_00033.pdb 56 VTFLLAVGGGSVLDGTKFIAAAANY- 80 usage_00112.pdb 57 ADYLIAIGGGSPQDTCKAIGIISNNP 82 usage_00113.pdb 57 ADYLIAIGGGSPQDTCKAIGIISNNP 82 usage_00175.pdb 59 PDVIIALGGGSPMDAAKAMWLFYEHP 84 usage_00301.pdb 57 ADYLIAIGGGSPQDTCKAIGIISNN- 81 usage_00302.pdb 58 ADYLIAIGGGSPQDTCKAIGIISNN- 82 d liA GGGSp D Kai n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################