################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:00 2021 # Report_file: c_0142_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00007.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00023.pdb # 8: usage_00030.pdb # 9: usage_00031.pdb # 10: usage_00032.pdb # 11: usage_00033.pdb # # Length: 179 # Identity: 21/179 ( 11.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/179 ( 22.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/179 ( 25.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 K--RELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKP- 57 usage_00012.pdb 1 -ST-DTVLITEKLHFGSLTPIQSQALPAI-SGRDVIGISKTGSGKTISYLLPLLRQVK-A 56 usage_00013.pdb 1 ---PDLLKSIIRVGILKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLD-- 55 usage_00018.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 usage_00019.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 usage_00020.pdb 1 ---RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 56 usage_00023.pdb 1 ---PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEP- 56 usage_00030.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 usage_00031.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 usage_00032.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 usage_00033.pdb 1 K--RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL- 57 ll i g p piQ P G D ak G GK p l usage_00007.pdb 58 ------KLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLN- 109 usage_00012.pdb 57 QRPLSKHE-TGPGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGG-SEKKQITDLK- 113 usage_00013.pdb 56 -------N-GPGMLVLTPTRELALHVEAECSKYS--YKGLKSICIYG------QIEDIS- 98 usage_00018.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 usage_00019.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 usage_00020.pdb 57 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 109 usage_00023.pdb 57 ------VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKK 110 usage_00030.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 usage_00031.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 usage_00032.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 usage_00033.pdb 58 ------KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD- 110 pTRELAlq G i l usage_00007.pdb 110 ETVHILVGTPGRVLDLASR--K-VADLSDCSLFIMDEADKMLSR-DFKTIIEQILSFL- 163 usage_00012.pdb 114 RGTEIVVATPGRFIDILTLNDGKLLSTKRITFVV-DEADRLFDL--------------G 157 usage_00013.pdb 99 KGVDIIIATPGRLNDLQMN--N-SVNLRSITYLVIDEADKMLDM--------------E 140 usage_00018.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 164 usage_00019.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLS---------------- 150 usage_00020.pdb 110 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 163 usage_00023.pdb 111 NCPHIVVGTPGRILALARN--K-SLNLKHIKHFILDEADKMLEQLDMRRDVQEIFR--- 163 usage_00030.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 164 usage_00031.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 164 usage_00032.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 164 usage_00033.pdb 111 DTVHVVIATPGRILDLIKK--G-VAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTL- 164 TPGR dl DEADk l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################