################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:03 2021 # Report_file: c_1124_77.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00032.pdb # 2: usage_00228.pdb # 3: usage_00378.pdb # 4: usage_00547.pdb # 5: usage_00548.pdb # # Length: 88 # Identity: 1/ 88 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 88 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 88 ( 47.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 ----VRE-QQLDAAVDVFSDRG--------FHETSDAIAAKA-EIS-KPLYLYYG-SKDE 44 usage_00228.pdb 1 --P--------EASVLLASYAVQAKYGDYDPSVHKRGFLAQEELL-PKRVINLYQMTPEM 49 usage_00378.pdb 1 TRSARKDREIIQAATAAFISKG--------YDGTSEEIATKA-GASKQTVYKHFT-DKET 50 usage_00547.pdb 1 -----KRESIVQAAIAEFGDRG--------FEITSDRIAARA-EVSKRTVYNHFP-SKEE 45 usage_00548.pdb 1 ----QKRESIVQAAIAEFGDRG--------FEITSDRIAARA-EVSKRTVYNHFP-SKEE 46 Aa f g ts iaa a vy ke usage_00032.pdb 45 LFAA-CIQREGLRFVEALAPAGD----- 66 usage_00228.pdb 50 WEERIT--AWYAEHR------------- 62 usage_00378.pdb 51 LFGE-VVLSTASQVNDIIESVTTLLSEA 77 usage_00547.pdb 46 LFAE-L---QRLW--N------------ 55 usage_00548.pdb 47 LFAE-L-Q-RLWN--C------------ 57 lf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################