################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:28 2021 # Report_file: c_1120_59.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00045.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00111.pdb # 5: usage_00112.pdb # 6: usage_00113.pdb # 7: usage_00114.pdb # 8: usage_00115.pdb # 9: usage_00116.pdb # 10: usage_00276.pdb # 11: usage_00277.pdb # 12: usage_00569.pdb # 13: usage_00570.pdb # 14: usage_00571.pdb # # Length: 73 # Identity: 43/ 73 ( 58.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 73 ( 58.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 73 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 DVRGRYEILKVHARNKKLAKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITM 60 usage_00109.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00110.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00111.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00112.pdb 1 DMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 60 usage_00113.pdb 1 DMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 60 usage_00114.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00115.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00116.pdb 1 DMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 60 usage_00276.pdb 1 -VRGRYEILKVHARNKKLAKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITM 59 usage_00277.pdb 1 -VRGRYEILKVHARNKKLAKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITM 59 usage_00569.pdb 1 DMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 60 usage_00570.pdb 1 -MLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 59 usage_00571.pdb 1 DMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITM 60 GR IL H RNK LA DV LE A TPG GADLENL NEAALLAAR G ITM usage_00045.pdb 61 EEIEEALDRIT-- 71 usage_00109.pdb 60 KDFEEAIDRVIAG 72 usage_00110.pdb 60 KDFEEAIDRVI-- 70 usage_00111.pdb 60 KDFEEAIDRVI-- 70 usage_00112.pdb 61 KDFEEAIDRVIA- 72 usage_00113.pdb 61 KDFEEAIDRVI-- 71 usage_00114.pdb 60 KDFEEAIDRVI-- 70 usage_00115.pdb 60 KDFEEAIDRVI-- 70 usage_00116.pdb 61 KDFEEAIDRVI-- 71 usage_00276.pdb 60 EEIEEALDRIT-- 70 usage_00277.pdb 60 EEIEEALDRIT-- 70 usage_00569.pdb 61 KDFEEAIDRVIAG 73 usage_00570.pdb 60 KDFEEAIDRVIAG 72 usage_00571.pdb 61 KDFEEAIDRVI-- 71 EEA DR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################