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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:11:09 2021
# Report_file: c_0170_1.html
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#====================================
# Aligned_structures: 5
#   1: usage_00007.pdb
#   2: usage_00031.pdb
#   3: usage_00032.pdb
#   4: usage_00033.pdb
#   5: usage_00041.pdb
#
# Length:        176
# Identity:       76/176 ( 43.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    136/176 ( 77.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           40/176 ( 22.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00007.pdb         1  GKLVFLGLDNAGKTTLLHML-----------TSEELTI-A----GMTFTTF-DL-----R   38
usage_00031.pdb         1  GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR   59
usage_00032.pdb         1  GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR   59
usage_00033.pdb         1  GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR   59
usage_00041.pdb         1  GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG-HIQARR   59
                           GKLlFLGLDNAGKTTLLHML           whptsee A    kfTtfdl g      R

usage_00007.pdb        39  VWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISE   98
usage_00031.pdb        60  LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE  119
usage_00032.pdb        60  LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE  119
usage_00033.pdb        60  LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE  119
usage_00041.pdb        60  LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE  119
                           lWKdYfPevNGIVFLVDaADpeRfdEarVELdALfniaelkdVPfvILGNKIDapnAvSE

usage_00007.pdb        99  EKLREIFGLYGQTTGKGNVTLKE---LNARPMEVFMCSVLKRQGYGEGFRWLSQYI  151
usage_00031.pdb       120  AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS---  161
usage_00032.pdb       120  AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS---  161
usage_00033.pdb       120  AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS---  161
usage_00041.pdb       120  AELRSALGLLNT-----------TGIEGQRPVEVFMCSVVMRNGYLEAFQWLS---  161
                           aeLRsalGLlnt              egqRPvEVFMCSVvmRnGYlEaFqWLS   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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