################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:29 2021 # Report_file: c_0415_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00037.pdb # 2: usage_00043.pdb # 3: usage_00049.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00072.pdb # 7: usage_00111.pdb # 8: usage_00159.pdb # 9: usage_00179.pdb # # Length: 73 # Identity: 62/ 73 ( 84.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 73 ( 84.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 73 ( 15.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 EYIMSKTLGS----EVKLAFERKTCKKVAIKIISK-PALNVETEIEILKKLNHPCIIKIK 55 usage_00043.pdb 1 EYIMSKTLGSGA-GEVKLAFERKTCKKVAIKIISK--ALNVETEIEILKKLNHPCIIKIK 57 usage_00049.pdb 1 -YIMSKTLGSGA-GEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK 54 usage_00069.pdb 1 -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK 55 usage_00070.pdb 1 -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK 55 usage_00072.pdb 1 -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK---LNVETEIEILKKLNHPCIIKIK 56 usage_00111.pdb 1 EYIMSKTLGS----EVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK 52 usage_00159.pdb 1 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR---NVETEIEILKKLNHPCIIKIK 57 usage_00179.pdb 1 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK---LNVETEIEILKKLNHPCIIKIK 57 YIMSKTLGS EVKLAFERKTCKKVAIKIISK NVETEIEILKKLNHPCIIKIK usage_00037.pdb 56 NFFDAEDYYIV-- 66 usage_00043.pdb 58 NFFDAEDYYIV-- 68 usage_00049.pdb 55 NFFDAEDYYIV-- 65 usage_00069.pdb 56 NFFDAEDYYIV-- 66 usage_00070.pdb 56 NFFDAEDYYIV-- 66 usage_00072.pdb 57 NFFDAEDYYIV-- 67 usage_00111.pdb 53 NFFDAEDYYIV-- 63 usage_00159.pdb 58 NFFDAEDYYIVLE 70 usage_00179.pdb 58 NFFDAEDYYIV-- 68 NFFDAEDYYIV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################