################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:07 2021 # Report_file: c_0788_2.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00001.pdb # 2: usage_00101.pdb # 3: usage_00102.pdb # 4: usage_00103.pdb # 5: usage_00189.pdb # 6: usage_00278.pdb # 7: usage_00288.pdb # 8: usage_00348.pdb # 9: usage_00440.pdb # 10: usage_00441.pdb # 11: usage_00442.pdb # 12: usage_00445.pdb # 13: usage_00446.pdb # 14: usage_00447.pdb # # Length: 117 # Identity: 1/117 ( 0.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/117 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/117 ( 56.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----------NT-VYFG----FDKYDITGEYVQILDAHAAYLNATP---------A-AK 34 usage_00101.pdb 1 -MELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 44 usage_00102.pdb 1 HMELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 45 usage_00103.pdb 1 ------DLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 39 usage_00189.pdb 1 --NVNVTVQDKYKV----------------NYDEKVKSIKDTMDETMNNSEDLNH-L-YI 40 usage_00278.pdb 1 ------------P-IAFG----NDGASLIPADYEILNRVADKLKACP---------D-AR 33 usage_00288.pdb 1 ----PEVQTKHFT-LKSDVLFNFNKATLKPEGQAALDQLYSQLSNLD--------PKDGS 47 usage_00348.pdb 1 -----------NI-VYFG----FDKYDIGSDFAQ-LDAHAAFLRSNP---------S-DK 33 usage_00440.pdb 1 -MELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 44 usage_00441.pdb 1 --ELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 43 usage_00442.pdb 1 HMELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 45 usage_00445.pdb 1 -MELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 44 usage_00446.pdb 1 HMELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 45 usage_00447.pdb 1 HMELTEDLNMELR-VFFD----TNKSNIKDQYKPEIAKVAEKLSEYP---------N-AT 45 l usage_00001.pdb 35 VLVEGNTDERGTPEYNIALGQRRADAVKGYLAG-KG-------VDA-GKLGTVSYGE 82 usage_00101.pdb 45 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 90 usage_00102.pdb 46 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 91 usage_00103.pdb 40 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 85 usage_00189.pdb 41 NFTSLSS--GGTAWN-------SPYYYASYINPEIANDIKQKNP-TRVGWVIQD--- 84 usage_00278.pdb 34 VTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGV-------AGD-HI-ATVG--- 78 usage_00288.pdb 48 VVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISK-G-------IPA-DKISARG--- 92 usage_00348.pdb 34 VVVEGHADERGTPEYNIALGERRASAVKY-L-QGKG-------VSA-DQISIVS--- 77 usage_00440.pdb 45 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 90 usage_00441.pdb 44 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 89 usage_00442.pdb 46 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 91 usage_00445.pdb 45 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 90 usage_00446.pdb 46 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 91 usage_00447.pdb 46 ARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYN-------VDA-SRLSTQG--- 91 g G ra v l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################