################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:54 2021 # Report_file: c_1227_214.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00051.pdb # 2: usage_00905.pdb # 3: usage_00929.pdb # 4: usage_01412.pdb # 5: usage_01765.pdb # 6: usage_01766.pdb # 7: usage_01767.pdb # 8: usage_01769.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 41 ( 31.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -DLAYVIYT-S----PKGTMLEHKGISNLKVFFENSLN--- 32 usage_00905.pdb 1 -DIAYVMYT-S---KPKGVRIGHPSIINFLLSMNDRLQ--- 33 usage_00929.pdb 1 DRVGVVL-P-------GGVFFNPHQVLTTLALYRFRKG--- 30 usage_01412.pdb 1 RLWIEFESE-K----GLDYGGVAREWFFLLSKEMFNP-YYG 35 usage_01765.pdb 1 -DLVYVMYTSGSTGLAKGVMIEHHNLVNFCEWYRPYFG--- 37 usage_01766.pdb 1 -DLVYVMYTSGSTGLAKGVMIEHHNLVNFCEWYRPYF---- 36 usage_01767.pdb 1 -DLVYVMYT-S-TGLAKGVMIEHHNLVNFCEWYRPYFG--- 35 usage_01769.pdb 1 -DLVYVMYT-S----AKGVMIEHHNLVNFCEWYRPYF---- 31 v g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################