################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:12 2021 # Report_file: c_0710_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00175.pdb # 4: usage_00176.pdb # 5: usage_00177.pdb # 6: usage_00178.pdb # 7: usage_00307.pdb # # Length: 104 # Identity: 71/104 ( 68.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/104 ( 70.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/104 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 YLVSVGGALNSRGMNGEGLPWRVAIQKP-----QAVVDINGHGISTSGSY-R-N-Y---- 48 usage_00031.pdb 1 YLVSVGGALNSRGMNGEGLPWRVAIQKP------AVVDINGHGISTSGSY-R-N------ 46 usage_00175.pdb 1 YLVSVGGALNSRG-NGEGLPWRVAIQKPTDK--QAVVDINGHGISTSGSY-R-N------ 49 usage_00176.pdb 1 YLVSVGGALNSRG-NGEGLPWRVAIQ-------QAVVDINGHGISTSGSY-R-N-YYELD 49 usage_00177.pdb 1 YLVSVGGALNSRG-NGEGLPWRVAIQKP---TVQAVVDINGHGISTSGSY-R-N-YYELD 53 usage_00178.pdb 1 YLVSVGGALNSRG-NGEGLPWRVAIQK------QAVVDINGHGISTSGSY-RNYY--ELD 50 usage_00307.pdb 1 YLVSVGGALNSRGMNGEGLPWRVAIQK-------AVVDINGHGISTSG-SYR-N------ 45 YLVSVGGALNSRG NGEGLPWRVAIQ AVVDINGHGISTSG y R n usage_00030.pdb 49 K-RLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLMVLG 91 usage_00031.pdb 47 K-RLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLMVL- 88 usage_00175.pdb 50 --RLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLVL-- 89 usage_00176.pdb 50 GKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLVLG- 92 usage_00177.pdb 54 GKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLVL-- 95 usage_00178.pdb 51 GKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAW-------- 86 usage_00307.pdb 46 -----HVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLMVLG 84 HVIDPQTGRPIEHNLVSVTVIAPTALEADAW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################