################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:04:38 2021 # Report_file: c_0905_71.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00067.pdb # 2: usage_00113.pdb # 3: usage_00151.pdb # 4: usage_00233.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00236.pdb # 8: usage_00237.pdb # 9: usage_00238.pdb # 10: usage_00239.pdb # 11: usage_00240.pdb # 12: usage_00281.pdb # 13: usage_00864.pdb # 14: usage_00899.pdb # 15: usage_00900.pdb # 16: usage_00901.pdb # 17: usage_00902.pdb # 18: usage_01012.pdb # # Length: 77 # Identity: 11/ 77 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 77 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 77 ( 41.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 -------------VNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00113.pdb 1 -------------------VELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 39 usage_00151.pdb 1 ------------GTNTVLELLIAPTSCRKNETS-AGNCEAVS----NGTKQICTVAIWEK 43 usage_00233.pdb 1 -------------VNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00234.pdb 1 -------------------VELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 39 usage_00235.pdb 1 -------------VNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00236.pdb 1 -------------------VELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 39 usage_00237.pdb 1 -------------VNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00238.pdb 1 --------------------ELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 38 usage_00239.pdb 1 --------------------ELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 38 usage_00240.pdb 1 --------------------ELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 38 usage_00281.pdb 1 -------------VNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00864.pdb 1 -------------VNYFLDVEVGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00899.pdb 1 -------------VNYFLDVEVGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00900.pdb 1 -----------AGVNYFLDVEVGRTTCTKTQPNLD-NCPFH-----K-RKAFCSFQIYAV 42 usage_00901.pdb 1 -------------VNYFLDVEVGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_00902.pdb 1 -------------VNYFLDVEVGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 45 usage_01012.pdb 1 LQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLD-NCPFHDQPHLK-RKAFCSFQIYAV 58 e grTtCtKtqpn d NCpfh k rKafCsfqIyav usage_00067.pdb 46 PW--QGTMTLSKSTCQD 60 usage_00113.pdb 40 PW--QGTMTLSKSTCQ- 53 usage_00151.pdb 44 PWENFEEITIKECKS-- 58 usage_00233.pdb 46 PW--QGTMTLSKSTCQD 60 usage_00234.pdb 40 PW--QGTMTLSKSTCQ- 53 usage_00235.pdb 46 PW--QGTMTLSKSTCQD 60 usage_00236.pdb 40 PW--QGTMTLSKSTCQD 54 usage_00237.pdb 46 PW--QGTMTLSKSTCQ- 59 usage_00238.pdb 39 PW--QGTMTLSKSTCQD 53 usage_00239.pdb 39 PW--QGTMTLSKSTCQ- 52 usage_00240.pdb 39 PW--QGTMTLSKSTCQ- 52 usage_00281.pdb 46 PW--QGTMTLSKSTCQ- 59 usage_00864.pdb 46 PW--QGTMTLSKSTCQD 60 usage_00899.pdb 46 PW--QGTMTLSKSTCQ- 59 usage_00900.pdb 43 PW--QGTMTLSKSTCQ- 56 usage_00901.pdb 46 PW--QGTMTLSKSTCQ- 59 usage_00902.pdb 46 PW--QGTMTLSKSTCQD 60 usage_01012.pdb 59 PW--QGTMTLSKSTCQ- 72 PW qgtmTlskstc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################