################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:48 2021 # Report_file: c_1370_139.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00359.pdb # 2: usage_00360.pdb # 3: usage_00815.pdb # 4: usage_00865.pdb # 5: usage_00866.pdb # 6: usage_00867.pdb # 7: usage_00943.pdb # 8: usage_00944.pdb # 9: usage_01310.pdb # 10: usage_01673.pdb # # Length: 64 # Identity: 3/ 64 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 64 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 64 ( 45.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00359.pdb 1 -KHLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-----------S-I-TQKDVNQVKK 46 usage_00360.pdb 1 RKHLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-------------I-TQKDVNQVKK 46 usage_00815.pdb 1 ----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLT-GEGEDTRL-S--ASEMKQLIDN 52 usage_00865.pdb 1 ----SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK--------LTDEEVDQMIRE 47 usage_00866.pdb 1 ----SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK--------LTDEEVDQMIRE 47 usage_00867.pdb 1 ----SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK--------LTDEEVDQMIRE 47 usage_00943.pdb 1 -----KQEVREAFDLFDSDGSGTIDVKELKVAMRALG-FE--------PRKEEMKKMISE 46 usage_00944.pdb 1 -----KQEVREAFDLFDSDGSGTIDVKELKVAMRALG-FE--------PRKEEMKKMISE 46 usage_01310.pdb 1 -----VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ-----V-------GHRDIEE 43 usage_01673.pdb 1 ------HAITQEFENFDT-KTNTISREEFRAICNRRV-QI--------LTDEQFGRLWN- 43 aF FD g i el usage_00359.pdb 47 MIQ- 49 usage_00360.pdb 47 MIQ- 49 usage_00815.pdb 53 IL-- 54 usage_00865.pdb 48 AD-- 49 usage_00866.pdb 48 AD-- 49 usage_00867.pdb 48 AD-- 49 usage_00943.pdb 47 V--- 47 usage_00944.pdb 47 VD-- 48 usage_01310.pdb 44 IIRD 47 usage_01673.pdb 44 E--- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################