################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:09:32 2021 # Report_file: c_0151_6.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00046.pdb # 2: usage_00053.pdb # 3: usage_00059.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00076.pdb # 7: usage_00077.pdb # 8: usage_00078.pdb # 9: usage_00079.pdb # 10: usage_00081.pdb # 11: usage_00083.pdb # 12: usage_00084.pdb # 13: usage_00101.pdb # 14: usage_00102.pdb # 15: usage_00114.pdb # 16: usage_00195.pdb # 17: usage_00196.pdb # 18: usage_00203.pdb # 19: usage_00215.pdb # # Length: 125 # Identity: 36/125 ( 28.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/125 ( 35.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/125 ( 11.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 -QLVESGGGLVKPGGSLKLSCAASGFIFSDNYMYWVRQTPEKCLEWVATISDGGTYIDYS 59 usage_00053.pdb 1 -MLVESGGDLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGAYTYYP 59 usage_00059.pdb 1 VKLQESGGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYP 60 usage_00074.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGNYIYYP 60 usage_00075.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGNYIYYP 60 usage_00076.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGNYIYYP 60 usage_00077.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGNYIYYP 60 usage_00078.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGNYIYYP 60 usage_00079.pdb 1 VQLQESGGGLVQPGGSLKLSCAASGFTFRDYYMYWVRQTPEKRLEWVAFISNGGGSTYYP 60 usage_00081.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYP 60 usage_00083.pdb 1 VKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYS 60 usage_00084.pdb 1 VQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYP 60 usage_00101.pdb 1 VKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYA 60 usage_00102.pdb 1 VKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYA 60 usage_00114.pdb 1 VKLQESGGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYP 60 usage_00195.pdb 1 VKLQESGGDLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASITNGG-STYYS 59 usage_00196.pdb 1 VKLQESGGDLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASITNGG-STYYS 59 usage_00203.pdb 1 VQLQQSGVELVRAGSSVKMSCKASGYTFTSNGINWVKQRPGQGLEWIGYNNPGNGYIAYN 60 usage_00215.pdb 1 VQLQQSGVELVRAGSSVKMSCKASGYTFTSNGINWVKQRPGQGLEWIGYNNPGNGYITYN 60 L SG LV G S K SC aSG F WV Q p LEW G Y usage_00046.pdb 60 DSVKGRFTISRDNAKNNLYLQMSSLRSEDTGMYYCGRSPI--Y-Y-DYAPF--TYWGQGT 113 usage_00053.pdb 60 DSVKGRFTISDDNAESTLYLQMSSLRSEDTAMYYCVRRAF--D-S-D-VGF--ASWGHRT 112 usage_00059.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHE---Y-Y---YAM--DYWGQGT 111 usage_00074.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTREGAYSGSS-S-YPM--DYWGQGT 116 usage_00075.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTREGAYSGSS-S-YPM--DYWGQGT 116 usage_00076.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTREGAYSGSS-S-YPM--DYWGQGT 116 usage_00077.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTREGAYSGSS-S-YPM--DYWGQGT 116 usage_00078.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTREGAYSGSS-S-YPM--DYWGQGT 116 usage_00079.pdb 61 DTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGR---G-Y---VWF--AYWGQGT 111 usage_00081.pdb 61 DSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRER--Y-D-E-NGF--AYWGQGT 113 usage_00083.pdb 61 DNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYS--S-T-S-YAM--DYWGQGT 113 usage_00084.pdb 61 DSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRER--Y-D-E-NGF--AYWGQGT 113 usage_00101.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDY--Y-----G-SRGAYWGQGT 112 usage_00102.pdb 61 DTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDY--Y-----G-SRGAYWGQGT 112 usage_00114.pdb 61 DTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHE---Y-Y---YAM--DYWGQGT 111 usage_00195.pdb 60 DSVKGRFIISRDNARNILSLQMSSLRSEDTAMYYCERGEL--T-----YAM--DYWGQGT 110 usage_00196.pdb 60 DSVKGRFIISRDNARNILSLQMSSLRSEDTAMYYCERGEL--T-----YAM--DYWGQGT 110 usage_00203.pdb 61 EKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARSEY--Y-GGS-YKF--DYWGQGT 114 usage_00215.pdb 61 EKFKGKTTLTVDKSSNTAYMQLRSLTSEDSAVYFCARSEY--Y-GGS-YKF--DYWGQGT 114 KG d Q sL SED a Y C R yWGqgT usage_00046.pdb 114 LVTVS 118 usage_00053.pdb 113 LVTVS 117 usage_00059.pdb 112 TVTV- 115 usage_00074.pdb 117 SVTVS 121 usage_00075.pdb 117 SVTVS 121 usage_00076.pdb 117 SVTVS 121 usage_00077.pdb 117 SVTVS 121 usage_00078.pdb 117 SVTVS 121 usage_00079.pdb 112 TVTVS 116 usage_00081.pdb 114 LVTVS 118 usage_00083.pdb 114 TVTVS 118 usage_00084.pdb 114 LVTVS 118 usage_00101.pdb 113 LVTVS 117 usage_00102.pdb 113 LVTVS 117 usage_00114.pdb 112 TVTV- 115 usage_00195.pdb 111 TVTV- 114 usage_00196.pdb 111 TVTV- 114 usage_00203.pdb 115 TLTVS 119 usage_00215.pdb 115 TLTVS 119 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################