################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:09 2021 # Report_file: c_0877_20.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00134.pdb # 2: usage_00162.pdb # 3: usage_00163.pdb # 4: usage_00244.pdb # 5: usage_00245.pdb # 6: usage_00253.pdb # 7: usage_00254.pdb # 8: usage_00272.pdb # # Length: 110 # Identity: 11/110 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/110 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/110 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00134.pdb 1 PPENYEP------SIKHDIYSYAVITWEVLSRKQPFEDVTN-PLQIMYSV-SQGHRPVIN 52 usage_00162.pdb 1 APEALQKKPEDTNRRSA-DWSFAVLLWELVTREVPFADL-S-NEI-G-KVALEGLRPTIP 55 usage_00163.pdb 1 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-S-NMEIGMKVALEGLRPTIP 58 usage_00244.pdb 1 APEVLRD-E--PSNEKSDVYSFGVILWELATLQQPWGNL-N-PAQVVAAVGFKCKRLEIP 55 usage_00245.pdb 1 APEVLRD-E--PSNEKSDVYSFGVILWELATLQQPWGNL-N-PAQVVAAVGFKCKRLEIP 55 usage_00253.pdb 1 APEVLRD-E--PSNEKSDVYSFGVILWELATLQQPWGNL-N-PAQVVAAVGFKCKRLEIP 55 usage_00254.pdb 1 APEVLRD-E--PSNEKSDVYSFGVILWELATLQQPWGNL-N-PAQVVAAVGFKCKRLEIP 55 usage_00272.pdb 1 APEVFEG-S--NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGTRPPLI 56 aPE S v lWE t P V R i usage_00134.pdb 53 EESLPYDIPH--RARMISLI-ESGWAQNPDERPSFLKCLIELEPVLR--- 96 usage_00162.pdb 56 -----P----GISPHVSKLKI---CNEDPAKRPKFD-IVPILEKQ----- 87 usage_00163.pdb 59 -----P----GISPHVSKLM-KICMNEDPAKRPKFDMIVPILEKMQ---- 94 usage_00244.pdb 56 -----R----NLNPQVAAII-EGCWTNEPWKRPSFATIMDLLRPLIK--- 92 usage_00245.pdb 56 -----R----NLNPQVAAII-EGCWTNEPWKRPSFATIMDLLRPLIK--- 92 usage_00253.pdb 56 -----R----NLNPQVAAII-EGCWTNEPWKRPSFATIMDLLRPLI---- 91 usage_00254.pdb 56 -----R----NLNPQVAAII-EGCWTNEPWKRPSFATIMDLLRPLIK--- 92 usage_00272.pdb 57 -----K----NLPKPIESLM-TRCWSKDPSQRPSMEEIVKIMTHLMRYFP 96 P RP f i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################