################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:42 2021 # Report_file: c_0099_13.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00080.pdb # 2: usage_00092.pdb # 3: usage_00093.pdb # 4: usage_00104.pdb # # Length: 191 # Identity: 52/191 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 175/191 ( 91.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/191 ( 8.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 LVLVTGAGRGLGAAISSGAAEQGARVILVDIDGT-AAKAQADALTAKGFVAEGHALDVTD 59 usage_00092.pdb 1 LVLVTGAGRGLGAAISSGAAEQGARVILVDIDGT-AAKAQADALTAKGFVAEGHALDVTD 59 usage_00093.pdb 1 LVLVTGAGRGLGAAISSGAAEQGARVILVDIDGT-AAKAQADALTAKGFVAEGHALDVTD 59 usage_00104.pdb 1 RVLITGSTEGIGLATARLFARAGAKVGLNSHVDPANIDETIASMRADGGDAAFFAADLAT 60 lVLvTGagrGlGaAissgaAeqGArViLvdidgt aakaqadaltAkGfvAeghAlDvtd usage_00080.pdb 60 RDAVAALADDILSRFGGLDVLVNNAGVA-GRAAFDQPE-AVEVWDRVIGVNLEGAFNVSH 117 usage_00092.pdb 60 RDAVAALADDILSRFGGLDVLVNNAGVA-GRAAFDQPE-AVEVWDRVIGVNLEGAFNVSH 117 usage_00093.pdb 60 RDAVAALADDILSRFGGLDVLVNNAGVA-GRAAFDQPE-AVEVWDRVIGVNLEGAFNVSH 117 usage_00104.pdb 61 SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPE--IDDTFYDAVMDANIRSVVMTTK 118 rdAvaaLaDdilsrFGGlDVLvNNAGva GRaafdq avevwDrVigvNlegafnvsh usage_00080.pdb 118 ALVPALKAAK------GNVVHLCSVAGFVSGGS---TAGYVVSKGAIRSLTQVMARDLAP 168 usage_00092.pdb 118 ALVPALKAAK------GNVVHLCSVAGFVSGGS---TAGYVVSKGAIRSLTQVMARDLAP 168 usage_00093.pdb 118 ALVPALKAAK------GNVVHLCSVAGFVSGGS---TAGYVVSKGAIRSLTQVMARDLAP 168 usage_00104.pdb 119 FALPHLAAAAKASGQTSAVISTGSIAGHTGG--GPGAGLYGAAKAFLHNVHKNWVDFHTK 176 alvPaLkAAk gnVvhlcSvAGfvsG tagYvvsKgairsltqvmardlap usage_00080.pdb 169 HGIRVNAVAPG 179 usage_00092.pdb 169 HGIRVNAVAPG 179 usage_00093.pdb 169 HGIRVNAVAPG 179 usage_00104.pdb 177 DGVRFNIVSPG 187 hGiRvNaVaPG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################