################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:19 2021 # Report_file: c_1160_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00146.pdb # 2: usage_00177.pdb # 3: usage_00470.pdb # 4: usage_00471.pdb # 5: usage_00472.pdb # 6: usage_00947.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 39 ( 5.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 39 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 APTF----HNQPYSVR---IPENTPV-GTPIFIVNATDP 31 usage_00177.pdb 1 -VPL----AHTLVFPEWVP---------RPRLVASEV-- 23 usage_00470.pdb 1 APVF----QNTAFSTS---INETLPV-GSVVFSVLAV-- 29 usage_00471.pdb 1 APVF----QNTAFSTS---INETLPV-GSVVFSVLAV-- 29 usage_00472.pdb 1 APVF----QNTAFSTS---INETLPV-GSVVFSVLAV-- 29 usage_00947.pdb 1 ----DFADVITSTA-----------DTSTVLASYKAE-- 22 t a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################