################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:49 2021 # Report_file: c_1380_16.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00675.pdb # 2: usage_00676.pdb # 3: usage_00928.pdb # 4: usage_02166.pdb # 5: usage_02167.pdb # # Length: 98 # Identity: 3/ 98 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 98 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 98 ( 60.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00675.pdb 1 AAEEEDEVEWVVESIAGFLRGPDWSIPILDFVE--------------QKCEVFDDEEESK 46 usage_00676.pdb 1 ----EDEVEWVVESIAGFLRGPDWSIPILDFVE--------------QKCEVFDDEEESK 42 usage_00928.pdb 1 -----QRRLDV---------EKWIDGRLEELYRGREADMPDEVNIDELLE---------- 36 usage_02166.pdb 1 -------VEWVVESIAGFLRGPDWSIPILDFVE--------------QKCEVFDDEEESK 39 usage_02167.pdb 1 -AEEEDEVEWVVESIAGFLRGPDWSIPILDFVE--------------QKCEVFDDEEESK 45 vewV gpdwsipildfve qkc usage_00675.pdb 47 LTYT--EIHQEYKE----------LVEKLLESYLK--- 69 usage_00676.pdb 43 LTYT--EIHQEYKE----------LVEKLLESYLKEIG 68 usage_00928.pdb 37 ----LESEEERSRKIQGLLKSCTNPTENFVQELLVKL- 69 usage_02166.pdb 40 LTYT--EIHQEYKE----------LVEKLLESYLKE-- 63 usage_02167.pdb 46 LTYT--EIHQEYKE----------LVEKLLESYLKEI- 70 eihqeyke lvEkllesyLk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################