################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:08 2021 # Report_file: c_0146_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00010.pdb # 2: usage_00013.pdb # 3: usage_00099.pdb # 4: usage_00100.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00225.pdb # 8: usage_00253.pdb # 9: usage_00256.pdb # # Length: 116 # Identity: 29/116 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/116 ( 57.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/116 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKED-GR 59 usage_00013.pdb 1 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSNKKED-GR 59 usage_00099.pdb 1 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKED-GR 59 usage_00100.pdb 1 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKED-GR 59 usage_00110.pdb 1 QVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKED-GR 59 usage_00111.pdb 1 QVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKED-GR 59 usage_00225.pdb 1 QVKQNSPSLSVQEGRISILNCDYTNSMFDYFLWYKKYPAEGPTFLISISSIKDKNED-GR 59 usage_00253.pdb 1 QLNQSPQSMFIQEGEDVSMNCTSSSI-FNTWLWYKQDPGEGPVLLIALYKA-GELTSNGR 58 usage_00256.pdb 1 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKED-GR 59 Qv QspqSl v EGe ilNC y s F yf WY q PgEGP lLI i s k ed GR usage_00010.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN----A-YKVIFGKGTHLHVL- 109 usage_00013.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAASASF---GDNSKLIWGLGTSLVVNP 112 usage_00099.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAASANS----G-TYQRFGTGTKLQVVP 110 usage_00100.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAASANS----G-TYQRFGTGTKLQVVP 110 usage_00110.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAARYQG----G-RALIFGTGTTVSVSP 110 usage_00111.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAARYQG----G-RALIFGTGTTVSVSP 110 usage_00225.pdb 60 FTVFLNKSAKHLSLHIVPSQPGDSAVYFCAASVYAGGTSY-GKLTFGQGTILTVHP 114 usage_00253.pdb 59 LTAQFGITRKDSFLNISASIPSDVGIYFCAGGT------G-NQFYFGTGTSLTVIP 107 usage_00256.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAASKGA----D-RLTFGKGTQLIIQP- 109 fT ffnk K lsLhI SqPgDsa YFCAa g gt v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################