################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:29 2021 # Report_file: c_0461_98.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00219.pdb # 2: usage_00220.pdb # 3: usage_01031.pdb # 4: usage_01142.pdb # # Length: 142 # Identity: 17/142 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/142 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/142 ( 35.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00219.pdb 1 ---GLCIIINN-KN--FH-T--------DVDAANLRETFRNLKYEVRNKNDLTREEIVEL 45 usage_00220.pdb 1 ---GLCIIINNKN--------------TDVDAANLRETFRNLKYEVRNKNDLTREEIVEL 43 usage_01031.pdb 1 RRRGIALIFNHERF--FWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLK 58 usage_01142.pdb 1 SRTRLALIICNEEFDSIPR-RT----GAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTE 55 gl Iinn vD nl f nL yeV kndLt ee usage_00219.pdb 46 MRDVSKED-HSKRSSFVCVLLSHGEEGIIFGTN------GPV------DLK----KITNF 88 usage_00220.pdb 44 MRDVSKED-HSKRSSFVCVLLS-I-----FGTN------GPV------DLK----KITNF 80 usage_01031.pdb 59 IHEVSTVS-HADADCFVCVFLSH----------------GEGNHIYAYDAKIEIQTLTGL 101 usage_01142.pdb 56 LEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDIL------QLN----AIFNM 105 vs H sfvcV lS g dlk itn usage_00219.pdb 89 FRGDRCRSLTGKPKLFIIQAAR 110 usage_00220.pdb 81 FRGDRCRSLTGKPKLFIIQ--- 99 usage_01031.pdb 102 FKGDKCHSLVGKPKIFIIQ--- 120 usage_01142.pdb 106 LNTKNCPSLKDKPKVIIIQ--- 124 f gd C SL gKPK fIIQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################