################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:10 2021 # Report_file: c_1181_64.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00019.pdb # 2: usage_00134.pdb # 3: usage_00200.pdb # 4: usage_00279.pdb # 5: usage_00297.pdb # 6: usage_00298.pdb # 7: usage_00385.pdb # 8: usage_00472.pdb # 9: usage_00556.pdb # 10: usage_00828.pdb # 11: usage_00829.pdb # 12: usage_00879.pdb # 13: usage_00880.pdb # 14: usage_00881.pdb # 15: usage_00882.pdb # # Length: 24 # Identity: 4/ 24 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 24 ( 58.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 24 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 EFKKIKVLGS---GTVYKGLWIP- 20 usage_00134.pdb 1 EFKKIKVLG----GTVYKGLWIP- 19 usage_00200.pdb 1 EFKKIKVLSS---GTVYKGLWIP- 20 usage_00279.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00297.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00298.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00385.pdb 1 YVKIEEVIGAGEFGEVCRGRLKAP 24 usage_00472.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00556.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00828.pdb 1 -LRKVKVLGSGAFGTVYKGIWIP- 22 usage_00829.pdb 1 -LRKVKVLGSGAFGTVYKGIWIP- 22 usage_00879.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00880.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 usage_00881.pdb 1 EFKKIKVLGS-F-GTVYKGLWIP- 21 usage_00882.pdb 1 EFKKIKVLGSGAFGTVYKGLWIP- 23 k kVlg GtVykG wip #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################