################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:09 2021 # Report_file: c_0398_88.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00006.pdb # 2: usage_00078.pdb # 3: usage_00698.pdb # 4: usage_00707.pdb # 5: usage_00781.pdb # 6: usage_00783.pdb # # Length: 130 # Identity: 32/130 ( 24.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/130 ( 42.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/130 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 -SSLDLLLRNYYFNRDGK-RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT--- 55 usage_00078.pdb 1 DSSLDLLLRNYYFNRDD--RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT--- 55 usage_00698.pdb 1 -SSLDLLLRNYYFNRDD--RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTGNL 57 usage_00707.pdb 1 DSRASLALRNFYMNRDFRKSEEWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVR-L----- 54 usage_00781.pdb 1 GSSLQLLTRNYYFNHDR--SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLK-L----- 52 usage_00783.pdb 1 GSSLQLLTRNYYFNHDR---KEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLK-L----- 51 Ssl Ll RNyYfN D W QGF t SG T G vGfGvDa G LGlk usage_00006.pdb 56 -----DYSRAGGAVKVRISKTL--KWGEQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGL 108 usage_00078.pdb 56 ----DDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGL 111 usage_00698.pdb 58 PVPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFA----RLFPQTATGFQLQSSEFEGL 113 usage_00707.pdb 55 -----DYARLDATAKLRLSRSELKVGGLVPKLPTIQPNYGRLFPQVFQGALLTSGELSGL 109 usage_00781.pdb 53 ----DEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDL 108 usage_00783.pdb 52 ----DEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDL 107 s g a K R t g Pv a R PQt G L fe L usage_00006.pdb 109 DLEAGHFTE- 117 usage_00078.pdb 112 DLEAGHFTE- 120 usage_00698.pdb 114 DLEAGHFTE- 122 usage_00707.pdb 110 SLNLGRLTE- 118 usage_00781.pdb 109 TLTAGQVSF- 117 usage_00783.pdb 108 TLTAGQVSFT 117 L aG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################