################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:12 2021 # Report_file: c_0241_4.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00015.pdb # 7: usage_00016.pdb # 8: usage_00027.pdb # 9: usage_00028.pdb # 10: usage_00029.pdb # 11: usage_00030.pdb # 12: usage_00031.pdb # 13: usage_00037.pdb # # Length: 150 # Identity: 124/150 ( 82.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 125/150 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/150 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 usage_00003.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 usage_00010.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 usage_00011.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 usage_00012.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 usage_00015.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00016.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00027.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00028.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00029.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00030.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00031.pdb 1 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 60 usage_00037.pdb 1 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 60 QGVLFDCDGVLWNGER VPGAPELL RLARAGK LFVSNNSRRARPELALRFARLGF G usage_00002.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DAPGAVFVLGGEGLRAELRAAGLRLAGDPSA-- 116 usage_00003.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-----AVFVLGGEGLRAELRAAGLRLAGDPSAG- 113 usage_00010.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DAPGAVFVLGGEGLRAELRAAGLRLAGDPSA-- 116 usage_00011.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PPD---GAVFVLGGEGLRAELRAAGLRLAGDPSAGD 116 usage_00012.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-D--GAVFVLGGEGLRAELRAAGLRLAGDPSAGD 116 usage_00015.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00016.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00027.pdb 61 LRAEQLFSSALCAARLLRQRLSGP-----SGAVFVLGGEGLRAELRAAGLRLAGDPG--- 112 usage_00028.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00029.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00030.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00031.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DASGAVFVLGGEGLRAELRAAGLRLAGDPGE-- 116 usage_00037.pdb 61 LRAEQLFSSALCAARLLRQRLPG-PP-DAPGAVFVLGGEGLRAELRAAGLRLAGDPSAG- 117 LRAEQLFSSALCAARLLRQRLpG AVFVLGGEGLRAELRAAGLRLAGDP usage_00002.pdb 117 --APRVRAVLVGYDEHFSFAKLREACAHLR 144 usage_00003.pdb 114 --APRVRAVLVGYDEHFSFAKLREACAHLR 141 usage_00010.pdb 117 --APRVRAVLVGYDEHFSFAKLREACAHLR 144 usage_00011.pdb 117 GAAPRVRAVLVGYDEHFSFAKLREACAHLR 146 usage_00012.pdb 117 GAAPRVRAVLVGYDEHFSFAKLREACAHLR 146 usage_00015.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHL- 143 usage_00016.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHLR 144 usage_00027.pdb 113 -EDPRVRAVLVGYDEQFSFSRLTEACAHLR 141 usage_00028.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHLR 144 usage_00029.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHLR 144 usage_00030.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHLR 144 usage_00031.pdb 117 --DPRVRAVLVGYDEQFSFSRLTEACAHLR 144 usage_00037.pdb 118 --APRVRAVLVGYDEHFSFAKLREACAHLR 145 PRVRAVLVGYDE FSF L EACAHL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################