################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:32 2021 # Report_file: c_0226_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00004.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00025.pdb # 7: usage_00026.pdb # 8: usage_00030.pdb # # Length: 124 # Identity: 15/124 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/124 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/124 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 HAGLFDISHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTR 60 usage_00010.pdb 1 AVGIFDVSHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFN 60 usage_00011.pdb 1 SVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYK 60 usage_00012.pdb 1 SVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYK 60 usage_00013.pdb 1 SVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYK 60 usage_00025.pdb 1 AAGLFDVSH-GEVEVSGNDSLSFLQRL-TNDVSALTPGRAQYTA-CYPDGGTVDDLLIYQ 57 usage_00026.pdb 1 AAGLFDVSH-GEVEVSGNDSLSFLQRL-TNDVSALTPGRAQYTA-CYPDGGTVDDLLIYQ 57 usage_00030.pdb 1 SVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYK 60 G FDvSH ge v G F tnD s l g Y gg Ddl usage_00004.pdb 61 LAECRFMLVANAGNAQADFAELEKRA---F---GFECQVIAL--ERVLLALQGPQAAAVL 112 usage_00010.pdb 61 MGNNEYLMICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLA 120 usage_00011.pdb 61 VSPDEALMVVNAANIEKDFNWIKSHS---K---NFDVEVSNISDTTALIAFQGPKAQETL 114 usage_00012.pdb 61 VSPDEALMVVNAANIEKDFNWIKSHS---K---NFDVEVSNISDTTALIAFQGPKAQETL 114 usage_00013.pdb 61 VSPDEALMVVNAANIEKDFNWIKSHS---K---NFDVEVSNISDTTALIAFQGPKAQETL 114 usage_00025.pdb 58 KGENRYLLVINASNIDKDLAWK-EH----A---AGDVQIDNQSDQIALLAVQGPKAEAIL 109 usage_00026.pdb 58 KGENRYLLVINASNIDKDLAWK-EH----A---AGDVQIDNQSDQIALLAVQGPKAEAIL 109 usage_00030.pdb 61 VSPDEALMVVNAANIEKDFNWIKSHS---K---NFDVEVSNISDTTALIAFQGPKAQETL 114 l v na n kd w d al A QGPkA l usage_00004.pdb 113 ADAG 116 usage_00010.pdb 121 KDL- 123 usage_00011.pdb 115 QELV 118 usage_00012.pdb 115 QELV 118 usage_00013.pdb 115 QELV 118 usage_00025.pdb 110 KNLT 113 usage_00026.pdb 110 KNLT 113 usage_00030.pdb 115 QELV 118 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################