################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:32 2021 # Report_file: c_0126_4.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00012.pdb # 5: usage_00042.pdb # 6: usage_00043.pdb # 7: usage_00073.pdb # 8: usage_00074.pdb # 9: usage_00080.pdb # 10: usage_00081.pdb # 11: usage_00082.pdb # 12: usage_00090.pdb # 13: usage_00093.pdb # 14: usage_00094.pdb # 15: usage_00096.pdb # 16: usage_00097.pdb # 17: usage_00098.pdb # 18: usage_00099.pdb # 19: usage_00100.pdb # 20: usage_00101.pdb # 21: usage_00102.pdb # 22: usage_00123.pdb # 23: usage_00125.pdb # 24: usage_00126.pdb # # Length: 180 # Identity: 83/180 ( 46.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/180 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/180 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NANYIKNQ--L--L-----NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTRE---- 47 usage_00003.pdb 1 NANIIMP--------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 46 usage_00005.pdb 1 NANIIMPE--F---------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 49 usage_00012.pdb 1 NANYIKNQ--L--LGP----AKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKG 52 usage_00042.pdb 1 NANIIMP-------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00043.pdb 1 NANIIMP-------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00073.pdb 1 NADIIMPE-------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00074.pdb 1 NADIIMPE-------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00080.pdb 1 NANIIMPE--F--E-----PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 51 usage_00081.pdb 1 NANIIMPE------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 48 usage_00082.pdb 1 NANIIMP--------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 46 usage_00090.pdb 1 NANIIMPE-------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00093.pdb 1 NANIIMPE-------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00094.pdb 1 NANIIMPE-------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00096.pdb 1 NANIIMPE--FETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 58 usage_00097.pdb 1 NANIIMP-------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 47 usage_00098.pdb 1 NANIIMPE-----------PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 49 usage_00099.pdb 1 NANIIMPE--F---------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 49 usage_00100.pdb 1 NANIIMPE-----------PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 49 usage_00101.pdb 1 NANIIMPE------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 48 usage_00102.pdb 1 NANIIMPE------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 48 usage_00123.pdb 1 NANIIMPE------------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 48 usage_00125.pdb 1 NANIIMPEFK---------PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 51 usage_00126.pdb 1 NANIIMP--------------KSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 46 NA I K YIA QGCL TVNDFW M QENSRVIVMTT E usage_00001.pdb 48 ----VPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSW 103 usage_00003.pdb 47 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 106 usage_00005.pdb 50 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 109 usage_00012.pdb 53 RNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSW 112 usage_00042.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00043.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00073.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00074.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00080.pdb 52 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 111 usage_00081.pdb 49 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 108 usage_00082.pdb 47 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 106 usage_00090.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00093.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00094.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00096.pdb 59 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 118 usage_00097.pdb 48 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 107 usage_00098.pdb 50 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 109 usage_00099.pdb 50 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 109 usage_00100.pdb 50 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 109 usage_00101.pdb 49 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 108 usage_00102.pdb 49 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 108 usage_00123.pdb 49 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKV----TERTVWQYHFRTW 104 usage_00125.pdb 52 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 111 usage_00126.pdb 47 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 106 V YWP YG V N E Y LR L S R W Y W usage_00001.pdb 104 PDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKG 163 usage_00003.pdb 107 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 166 usage_00005.pdb 110 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 169 usage_00012.pdb 113 PDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKG 172 usage_00042.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00043.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00073.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00074.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIRE-- 165 usage_00080.pdb 112 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSTGIGRTGTFIVIDILIDIIREKG 171 usage_00081.pdb 109 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 168 usage_00082.pdb 107 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGMFIVIDILIDIIRE-- 164 usage_00090.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00093.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIRE-- 165 usage_00094.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00096.pdb 119 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 178 usage_00097.pdb 108 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 167 usage_00098.pdb 110 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 169 usage_00099.pdb 110 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 169 usage_00100.pdb 110 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 169 usage_00101.pdb 109 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 168 usage_00102.pdb 109 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 168 usage_00123.pdb 105 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIRE-- 162 usage_00125.pdb 112 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 171 usage_00126.pdb 107 PDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKG 166 PDHGVPS PGGVL FL QES AGP VHcSaGIGRTGt IVID L I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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