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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:10:33 2021
# Report_file: c_1050_62.html
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#====================================
# Aligned_structures: 9
#   1: usage_00019.pdb
#   2: usage_00252.pdb
#   3: usage_00411.pdb
#   4: usage_00447.pdb
#   5: usage_00448.pdb
#   6: usage_00542.pdb
#   7: usage_00638.pdb
#   8: usage_00639.pdb
#   9: usage_00821.pdb
#
# Length:         63
# Identity:        5/ 63 (  7.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/ 63 ( 30.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/ 63 ( 36.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00019.pdb         1  ---IAIDALNAIYQFLSTIRQ-KDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPVYVF   56
usage_00252.pdb         1  -RKVAIDASMSIYQFLI-----------------TTSHLMGMFYRTIRMMENGIKPVYVF   42
usage_00411.pdb         1  --KIAIDALNAIYQFLSTIRQ-EDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAYVF   57
usage_00447.pdb         1  --RMAVDASIWIYQFLKAVRD--QN-A-----V-KNSHITGFFRRICKLLYFGIRPVFVF   49
usage_00448.pdb         1  DKRMAVDASIWIYQFLKAVR------------V-KNSHITGFFRRICKLLYFGIRPVFVF   47
usage_00542.pdb         1  ---VAIDASMSIYQFLI-----------------TTSHLMGMFYRTIRMMENGIKPVYVF   40
usage_00638.pdb         1  -RKVAIDASMSIYQFLIAVRQ--GGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVF   57
usage_00639.pdb         1  -RKVAIDASMSIYQFLIAVRQ--GGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVF   57
usage_00821.pdb         1  GKTIAVNLSLWVCEAQTV-KKM-MG------SV-MKPHLRNLFFRISYLTQMDVKLVFVM   51
                               A da   iyqfl                    sH  g F R       gi pv Vf

usage_00019.pdb        57  DGE   59
usage_00252.pdb            ---     
usage_00411.pdb        58  DGK   60
usage_00447.pdb        50  DGG   52
usage_00448.pdb        48  DGG   50
usage_00542.pdb        41  DGK   43
usage_00638.pdb        58  DGK   60
usage_00639.pdb        58  DGK   60
usage_00821.pdb        52  EGE   54
                              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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