################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:01 2021 # Report_file: c_1250_72.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00248.pdb # 2: usage_00744.pdb # 3: usage_00745.pdb # 4: usage_00746.pdb # 5: usage_00747.pdb # 6: usage_00748.pdb # 7: usage_00749.pdb # 8: usage_01535.pdb # 9: usage_01536.pdb # 10: usage_01639.pdb # 11: usage_01640.pdb # # Length: 48 # Identity: 4/ 48 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 48 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 48 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00248.pdb 1 ---FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGI--RVVTIAPG-- 41 usage_00744.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDPK 40 usage_00745.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDP- 39 usage_00746.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDPK 40 usage_00747.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDPK 40 usage_00748.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDPK 40 usage_00749.pdb 1 HLLVAGTTGS-GASVGVNAMILSMLYKAQ-------PEDVRFIMIDP- 39 usage_01535.pdb 1 HLLVNGATGT-GKSVLLRELAYTGLLRGD-------R--MVIVDP--- 35 usage_01536.pdb 1 HLLVNGATGT-GKSVLLRELAYTGLLRGD-------R--MVIVDP--- 35 usage_01639.pdb 1 HLLVAGTTGS-GKSVGVNAMLLSILFKST-------PSEARLIMIDP- 39 usage_01640.pdb 1 HLLVAGTTGS-GKSVGVNAMLLSILFKST-------PSEARLIMIDP- 39 v G tG g Sv L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################