################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:54 2021 # Report_file: c_0706_32.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00088.pdb # 2: usage_00089.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00119.pdb # 6: usage_00129.pdb # 7: usage_00242.pdb # 8: usage_00243.pdb # 9: usage_00299.pdb # 10: usage_00403.pdb # 11: usage_00412.pdb # 12: usage_00501.pdb # 13: usage_00535.pdb # 14: usage_00586.pdb # 15: usage_00588.pdb # # Length: 45 # Identity: 35/ 45 ( 77.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 45 ( 80.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 45 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIAGFIK 42 usage_00089.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGFIK- 41 usage_00116.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00117.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIAGFIK 42 usage_00119.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGFIK- 41 usage_00129.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00242.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00243.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00299.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00403.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGGGFIK- 41 usage_00412.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGGFIK 42 usage_00501.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIAGFIK 42 usage_00535.pdb 1 RPLVTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGGGFIK- 44 usage_00586.pdb 1 ---VTIRIGGQLKEALLDTGADDTVIEENLPGWKPKIGGIGFIK- 41 usage_00588.pdb 1 ---VTIRIGGQLKEALLNTGADDTVIEENLPGWKPKIGGIGGFIK 42 VTIRIGGQLKEALLdTGADDTVIEENLPGWKPKIGG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################