################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:25 2021 # Report_file: c_1487_175.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_02566.pdb # 2: usage_02567.pdb # 3: usage_02570.pdb # 4: usage_02572.pdb # 5: usage_02573.pdb # 6: usage_02574.pdb # 7: usage_03578.pdb # 8: usage_03651.pdb # 9: usage_03750.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 33 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 33 ( 36.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02566.pdb 1 --DLSLADFGRKELRIAEHEMPGLMSL-RR--- 27 usage_02567.pdb 1 -------DFGRKELRIAEHEMPGLMSL-RREYA 25 usage_02570.pdb 1 ------ADFGRKELRIAEHEMPGLMSL-RR--- 23 usage_02572.pdb 1 --DLSLADFGRKELRIAEHEMPGLMSL-RREY- 29 usage_02573.pdb 1 --DLSLADFGRKELRIAEHEMPGLMSL-RR--- 27 usage_02574.pdb 1 --DLSLADFGRKELRIAEHEMPGLMSL-RR--- 27 usage_03578.pdb 1 AMDKLELVNDGLNIIDFIQKNQKEIQKTY---- 29 usage_03651.pdb 1 ------ADFGRKELRIAEHEMPGLMSL-RREY- 25 usage_03750.pdb 1 --DISLAEFGLQDMEIAKTDMMGLVEL-QRKYR 30 fg ia m gl l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################