################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:18 2021 # Report_file: c_0633_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00105.pdb # 2: usage_00140.pdb # 3: usage_00164.pdb # 4: usage_00165.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00168.pdb # 8: usage_00169.pdb # 9: usage_00170.pdb # 10: usage_00171.pdb # 11: usage_00199.pdb # # Length: 133 # Identity: 9/133 ( 6.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/133 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/133 ( 38.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 DTRERTEQLQWLFWQVAGFGPMLGQNHHFNRY-APE--V-VPYAIKRYTEESQRLYKVLN 56 usage_00140.pdb 1 DAAGRYEAIQWVMFQMGGIGPMFGQLGFFHK-FAGKEYE-DKRPRDRYVAESKRLLGVLE 58 usage_00164.pdb 1 DPARRWQTLQWLHFQMGGIGPMFGQLGFFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 58 usage_00165.pdb 1 ---------------------------FFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 31 usage_00166.pdb 1 ---------------------------FFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 31 usage_00167.pdb 1 ---------------------------FFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 31 usage_00168.pdb 1 DPARRWQTLQWLHFQMGGIGPMFGQLGFFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 58 usage_00169.pdb 1 ---------------------------FFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 31 usage_00170.pdb 1 -PARRWQTLQWLHFQMGGIGPMFGQLGFFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 57 usage_00171.pdb 1 -PARRWQTLQWLHFQMGGIGPMFGQLGFFHK-FAGREYE-DKRPLQRYVAESKRLLGVLE 57 usage_00199.pdb 1 -QLRRARTVAWMFAALNTIEPSILNFTTVWL-FE-RNEPWHEARLARTKEQLLKRLDELS 57 f a Ry es rll vL usage_00105.pdb 57 TQLEKTPYLGGNEYSIADIAVYPWAKCYE-HQ----KINLEDYPAVKKWLEKIQQRPATQ 111 usage_00140.pdb 59 QRLEGREWILGDQYSIADIATFPWVRNLIGFYEAGELVAIQDFPNVQRALAAFVARPAVV 118 usage_00164.pdb 59 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 118 usage_00165.pdb 32 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 91 usage_00166.pdb 32 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 91 usage_00167.pdb 32 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 91 usage_00168.pdb 59 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 118 usage_00169.pdb 32 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 91 usage_00170.pdb 58 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 117 usage_00171.pdb 58 ARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQ 117 usage_00199.pdb 58 AWLGDREWLEG-SFSAADILMICVLRRLES-SG-----ILKDYGNLLAYVERGKARPAFK 110 L r w y iADIa w r l v le aRPA usage_00105.pdb 112 AAYN--------- 115 usage_00140.pdb 119 RGLDS-------- 123 usage_00164.pdb 119 RGLEI-------- 123 usage_00165.pdb 92 RGLEI-------- 96 usage_00166.pdb 92 RGLEI-------- 96 usage_00167.pdb 92 RGLEI-------- 96 usage_00168.pdb 119 RGLEI-------- 123 usage_00169.pdb 92 RGLEI-------- 96 usage_00170.pdb 118 RGLEI-------- 122 usage_00171.pdb 118 RGLEI-------- 122 usage_00199.pdb 111 RAFDAQLAVFTAA 123 r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################