################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:35 2021 # Report_file: c_1148_65.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00611.pdb # 2: usage_00844.pdb # 3: usage_00846.pdb # 4: usage_01357.pdb # 5: usage_01992.pdb # 6: usage_03760.pdb # 7: usage_03936.pdb # # Length: 80 # Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 80 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/ 80 ( 77.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00611.pdb 1 -------YYYKVTA--EKIDKVPGVSY--DT-TSYTVQVH---VLW--NEE-QQKPVATY 42 usage_00844.pdb 1 GHDYVLDNVHFHAPMEFLINN-----K--TR-PLSAHFVH---KDA--K---G---R-LL 40 usage_00846.pdb 1 --DYVLDNVHFHAPMEFLINN-----K--TR-PLSAHFVH---KDA--K---G---R-LL 38 usage_01357.pdb 1 -------PFTVEV------------------------PVPNKV--VKGQ--TV---E-IR 21 usage_01992.pdb 1 -------QFHFHVPSENQIKG-----R--TF-PMEAHFVH---LDE--N---K---Q-PL 33 usage_03760.pdb 1 -------QFHFHVPSENQIKG-----R--TF-PMEAHFVH---LDE--N---K---Q-PL 33 usage_03936.pdb 1 -------DFEFYMG-----ES------LDMEAGIIYSYYK---G-E--E---------IT 27 v usage_00611.pdb 43 IVGYK--------------- 47 usage_00844.pdb 41 VLAIGFE------------- 47 usage_00846.pdb 39 VLAIGFE------------E 46 usage_01357.pdb 22 CELKKEGDFSGTLYTIRYFQ 41 usage_01992.pdb 34 VLAVLYE------------A 41 usage_03760.pdb 34 VLAVLYE------------- 40 usage_03936.pdb 28 PRFVYI-------------- 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################