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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:02:35 2021
# Report_file: c_0227_3.html
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#====================================
# Aligned_structures: 9
#   1: usage_00006.pdb
#   2: usage_00012.pdb
#   3: usage_00024.pdb
#   4: usage_00029.pdb
#   5: usage_00030.pdb
#   6: usage_00031.pdb
#   7: usage_00032.pdb
#   8: usage_00033.pdb
#   9: usage_00034.pdb
#
# Length:        123
# Identity:       15/123 ( 12.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     41/123 ( 33.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           28/123 ( 22.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00006.pdb         1  VVRIDGYKGVPHCNENALKKAVA-SQPSVVAIDASSKQFQHYKSGIFSGPC-GTKLNHGV   58
usage_00012.pdb         1  AVSIDGHENVPENDENALLKAVA-NQPVSVAIDAGGSDFQFYSEGVFTGSC-GTELDHGV   58
usage_00024.pdb         1  YVSIDTYENVPYNNEWALQTAVA-YQPVSVALEAAGYNFQHYSSGIFTGPC-GTAVDHAV   58
usage_00029.pdb         1  VVSIDSYENVPSHNEQSLQKAVA-NQPVSVTMDAAGRDFQLYRSGIFTGSC-NISANHAL   58
usage_00030.pdb         1  VVSIDSYENVPSHNEQSLQKAVA-NQPVSVTMDAAGRDFQLYRSGIFTGSC-NISANHAL   58
usage_00031.pdb         1  VVSIDSYENVPSHNEQSLQKAVA-NQPVSVTMDAAGRDFQLYRSGIFTGSC-NISANHAL   58
usage_00032.pdb         1  VVSIDSYENVPSHNEQSLQKAVA-NQPVSVTMDAAGRDFQLYRSGIFTGSC-NISANHAL   58
usage_00033.pdb         1  -WRVGDYGSL-S-GREKMMAEIYANGPISCGIMA-TERLANYTGGIYAEYQDTTYINHVV   56
usage_00034.pdb         1  VVSINGFQRVTRNNESALQSAVA-SQPVSVTVEAAGAPFQHYSSGIFTGPC-GTAQNHGV   58
                            v i     v    e  l  ava  qP sv   A    fq Y  Gif g c      H  

usage_00006.pdb        59  VIVGYWK-----DYWIVRNSWGRYWGEQGYIRMKRV-G-GCG----------LCGIARLP  101
usage_00012.pdb        59  AIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEG----------LCGIAMEA  108
usage_00024.pdb        59  TIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQ----------CGIAKKAS  107
usage_00029.pdb        59  TVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDG----------KCGITRFA  107
usage_00030.pdb        59  TVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDG----------KCGITRFA  107
usage_00031.pdb        59  TVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDG----------KCGITRFA  107
usage_00032.pdb        59  TVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDG----------KCGITRFA  107
usage_00033.pdb        57  SVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTS------TYKDGKGARYNLAIEEHC  109
usage_00034.pdb        59  VIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAG----------LCGIAQLP  107
                             vGyg        WiV NSWG  WGe Gy r  r                    i    

usage_00006.pdb       102  YYP  104
usage_00012.pdb       109  SYP  111
usage_00024.pdb       108  YP-  109
usage_00029.pdb       108  SYP  110
usage_00030.pdb       108  SYP  110
usage_00031.pdb       108  SYP  110
usage_00032.pdb       108  SYP  110
usage_00033.pdb       110  TFG  112
usage_00034.pdb       108  SYP  110
                              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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