################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:55 2021 # Report_file: c_0518_35.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00089.pdb # 2: usage_00091.pdb # 3: usage_00535.pdb # 4: usage_00569.pdb # 5: usage_00640.pdb # # Length: 93 # Identity: 31/ 93 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 93 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 93 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 -PE-LSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCL 58 usage_00091.pdb 1 -PE-LSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCL 58 usage_00535.pdb 1 SFEAARKR-------------------NKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQL 41 usage_00569.pdb 1 TFEQAQKK-------------------DRHYEMSSMVETQALNKLKDNPEDFVDYNKKQL 41 usage_00640.pdb 1 -VPELSDMIIYCKSVHFGGFSS----GQAFYEMASFSESRALRLLQESGNGFVRHNVSCL 55 e yEM Sf E Al L s FV N L usage_00089.pdb 59 SRIYPAGWRTDSSNYSPVEMWNGGCQIVALN-- 89 usage_00091.pdb 59 SRIYPAGWRTDSSNYSPVEMWNGGCQIVALN-- 89 usage_00535.pdb 42 SRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQ 74 usage_00569.pdb 42 TRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQ 74 usage_00640.pdb 56 SRIYPAGWRTDSSNYSPVEMWNGGCQIVALN-- 86 sRIYP G R DSSNY P WN GCQ VALN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################