################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:41 2021 # Report_file: c_0301_20.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00021.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00068.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00105.pdb # 8: usage_00106.pdb # 9: usage_00107.pdb # 10: usage_00108.pdb # 11: usage_00113.pdb # 12: usage_00123.pdb # 13: usage_00124.pdb # # Length: 134 # Identity: 39/134 ( 29.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/134 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/134 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -EFRVIIPARFD---LPGKALVDIAGKP-IQHVYESAIKSGAEEVVIATDDKRIRQVAED 55 usage_00066.pdb 1 -SFTVIIPAR-----------------P-IQHVFEKALQSGASRVIIATDNENVADVAKS 41 usage_00067.pdb 1 -SFTVIIPARFA--RLPGKPLADIKGKP-IQHVFEKALQSGASRVIIATDNENVADVAKS 56 usage_00068.pdb 1 --FTVIIPARFASSRLPGKPLADIKGKP-IQHVFEKALQSGASRVIIATDNENVADVAKS 57 usage_00069.pdb 1 ---TVIIPARFASSRLPGKPLADIKGKPMIQHVFEKALQSGASRVIIATDNENVADVAKS 57 usage_00070.pdb 1 -SFTVIIPARFASSRLPGKPLADIKGKPMIQHVFEKALQSGASRVIIATDNENVADVAKS 59 usage_00105.pdb 1 MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQA 60 usage_00106.pdb 1 MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQA 60 usage_00107.pdb 1 MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQA 60 usage_00108.pdb 1 -SFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQA 59 usage_00113.pdb 1 -SFTVIIPARFASSRLPGKPLADIKGKP-IQHVFEKALQSGASRVIIATDNENVADVAKS 58 usage_00123.pdb 1 QAFTVVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKSAASRVVVATDDERILAACQG 60 usage_00124.pdb 1 QAFTVVIPARY-------KPLQDIAGQPMIQRVWNQARKSAASRVVVATDDERILAACQG 53 tV IPAR P IQ V A A rV ATD e usage_00021.pdb 56 FGAVVC-TSSDHQSGTERIAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHD 114 usage_00066.pdb 42 FGAEVC-TSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 100 usage_00067.pdb 57 FGAEVC-TSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 115 usage_00068.pdb 58 FGAEVC-TSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 116 usage_00069.pdb 58 FGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 117 usage_00070.pdb 60 FGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 119 usage_00105.pdb 61 FGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACS 120 usage_00106.pdb 61 FGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACS 120 usage_00107.pdb 61 FGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACS 120 usage_00108.pdb 60 FGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACS 119 usage_00113.pdb 59 FGAEVC-TSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 117 usage_00123.pdb 61 FGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHP 120 usage_00124.pdb 54 FGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHP 113 FG T H SGT Rl Ev I Vn QGDEPLIPP qvA nLa usage_00021.pdb 115 -KV-A--SLCTP-- 122 usage_00066.pdb 101 -VN-A--SLAVK-- 108 usage_00067.pdb 116 -VN-A--SLAVKIH 125 usage_00068.pdb 117 -VN-A--SLAVKIH 126 usage_00069.pdb 118 -VNMA--SLAVK-- 126 usage_00070.pdb 120 -VNMA--SLAVK-- 128 usage_00105.pdb 121 -APMA--TLAVE-- 129 usage_00106.pdb 121 -APMA--TLAVE-- 129 usage_00107.pdb 121 -APMA--TLAVE-- 129 usage_00108.pdb 120 -APMA--TLAV--- 127 usage_00113.pdb 118 -VN-A--SL----- 122 usage_00123.pdb 121 -EA-AIATLAEP-- 130 usage_00124.pdb 114 EAAIA--TLAEP-- 123 A L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################