################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:11 2021 # Report_file: c_1442_816.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00877.pdb # 2: usage_01518.pdb # 3: usage_01519.pdb # 4: usage_02848.pdb # 5: usage_03484.pdb # 6: usage_03676.pdb # 7: usage_04681.pdb # 8: usage_05175.pdb # 9: usage_10837.pdb # 10: usage_11855.pdb # 11: usage_12750.pdb # 12: usage_13975.pdb # 13: usage_14690.pdb # 14: usage_15298.pdb # 15: usage_16292.pdb # 16: usage_16293.pdb # 17: usage_16294.pdb # 18: usage_17757.pdb # 19: usage_18159.pdb # 20: usage_18161.pdb # 21: usage_18358.pdb # 22: usage_19847.pdb # 23: usage_19959.pdb # 24: usage_20339.pdb # # Length: 21 # Identity: 1/ 21 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 21 ( 4.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 21 ( 38.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00877.pdb 1 --NWYQQVPGTA-PKLLIYS- 17 usage_01518.pdb 1 DSFYYESFPDRD-PKICFGD- 19 usage_01519.pdb 1 DSFYYESFPDRD-PKICFGD- 19 usage_02848.pdb 1 SVYWYQQFPGTT-PKVLIYN- 19 usage_03484.pdb 1 YVSWYQQHPGKA-PKLMIYE- 19 usage_03676.pdb 1 PVNWYQQLPGKA-PKLLIYS- 19 usage_04681.pdb 1 ----YVQHLNEA-PKLLL--- 13 usage_05175.pdb 1 -YFEWRHEGANKIPYYIY--V 18 usage_10837.pdb 1 --AWYQQKPGQS-PKLLIYW- 17 usage_11855.pdb 1 YAYWYQQKPGQA-PVLVIYK- 19 usage_12750.pdb 1 --NWIQQLPGRA-PELLMYD- 17 usage_13975.pdb 1 TVNWYQQVPGTA-PRLLIYK- 19 usage_14690.pdb 1 --AWYVQKPGRS-PQLLIYL- 17 usage_15298.pdb 1 --AWYQQKPGQS-PKLLIYW- 17 usage_16292.pdb 1 --SWFQQHPGKA-PKLMLYD- 17 usage_16293.pdb 1 --SWFQQHPGKA-PKLMLYD- 17 usage_16294.pdb 1 --SWFQQHPGKA-PKLMLYD- 17 usage_17757.pdb 1 YAYWYQQKPGRA-PVMVIYK- 19 usage_18159.pdb 1 --AWLQQHQGHP-PKLLS--- 15 usage_18161.pdb 1 --AWLQQHQGHP-PKLLS--- 15 usage_18358.pdb 1 YVSWYQQHPGKA-PKLIIHD- 19 usage_19847.pdb 1 --SWYQQHAGKA-PKVIIYE- 17 usage_19959.pdb 1 --HWYQQKPGQP-PKLLI--- 15 usage_20339.pdb 1 --SWYQQHSGTA-PRLLIYD- 17 P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################