################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:54 2021 # Report_file: c_0509_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00031.pdb # 2: usage_00079.pdb # 3: usage_00080.pdb # 4: usage_00089.pdb # 5: usage_00090.pdb # 6: usage_00165.pdb # # Length: 110 # Identity: 36/110 ( 32.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/110 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/110 ( 20.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 --KELAYLIDRALDMKKNPAKY------TARAANKTLLAFFAKPSLRTRVSLETAMTRLG 52 usage_00079.pdb 1 TKEEMHYLVDLSLKIKEA----IKNGYYPQLLKNKSLGMIFQQSSTRTRVSFETAMEQLG 56 usage_00080.pdb 1 TKEEMHYLVDLSLKIKEA----IKNGYYPQLLKNKSLGMIFQQSSTRTRVSFETAMEQLG 56 usage_00089.pdb 1 TKEEMHYLVDLSLKIKEA----IKNGYYPQLLKNKSLGMIFQQSSTGTRVSFETAMEQLG 56 usage_00090.pdb 1 TKEEMHYLVDLSLKIKEA----IKNGYYPQLLKNKSLGMIFQQSSTGTRVSFETAMEQLG 56 usage_00165.pdb 1 TKEEMHYLVDLSLKIKEA----IKNGYYPQLLKNKSLGMIFQQSSTRTRVSFETAMEQLG 56 eEmhYLvDlsLkiKea pqllkNKsLgmiFqqsSt TRVSfETAMeqLG usage_00031.pdb 53 GHAIYYEL---------TVQDTAEVFSRMVDICTARLATKEMMREMAQHA 93 usage_00079.pdb 57 GHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLAN-- 104 usage_00080.pdb 57 GHGEYLAPGQI----HETIEDTSRVLSRLVDILMARVERHHSIVDLANCA 102 usage_00089.pdb 57 GHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANC- 105 usage_00090.pdb 57 GHGEYLAPGQI-----ETIEDTSRVLSRLVDILMARVERHHSIVDLAN-- 99 usage_00165.pdb 57 GHGEYLAPGIQ-LGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANC- 104 GHgeYlap TieDTsrVlSRlVDIlmARverhhsivdlAn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################