################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:57 2021 # Report_file: c_0753_26.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00178.pdb # 2: usage_00179.pdb # 3: usage_00180.pdb # 4: usage_00362.pdb # 5: usage_00363.pdb # 6: usage_00483.pdb # 7: usage_00484.pdb # 8: usage_00485.pdb # 9: usage_00486.pdb # 10: usage_00487.pdb # 11: usage_00488.pdb # 12: usage_00489.pdb # 13: usage_00645.pdb # # Length: 59 # Identity: 30/ 59 ( 50.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 59 ( 55.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 59 ( 20.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00179.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00180.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00362.pdb 1 --LEIDVFLLF-P--EE--FSKEELRERGLEIGKAVLD---EHPYVHGVVKGVEVDVVP 49 usage_00363.pdb 1 GSLEIDVFLLFPE-EFS----KEELRERGLEIGKAVLDSY-EHPYVHGVVKGVEVDVVP 53 usage_00483.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00484.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00485.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00486.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00487.pdb 1 -SLEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 57 usage_00488.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00489.pdb 1 --LEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 56 usage_00645.pdb 1 -SLEIDVFLLF-PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVP 57 LEIDVFLLF p fs E E G EHPYVHGVVKGVEVDVVP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################