################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:58 2021 # Report_file: c_1012_22.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00058.pdb # 2: usage_00059.pdb # 3: usage_00123.pdb # 4: usage_00150.pdb # 5: usage_00173.pdb # 6: usage_00187.pdb # 7: usage_00582.pdb # # Length: 64 # Identity: 8/ 64 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 64 ( 32.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 64 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 FDFNIMVVGQSGLGKSTLVNTLFKSQV-------IPKTV-EIKAIGHVI---EKMKLTVI 49 usage_00059.pdb 1 FDFNIMVVGQSGLGKSTLVNTLFKSQV------KIPKTV-EIKAIGHVIEGGVKMKLTVI 53 usage_00123.pdb 1 FEFNIMVVGQSGLGKSTLINTLFKS--------RIPKTI-EIKSITHDI----RMKLTVI 47 usage_00150.pdb 1 FDFNIMVVGQSGLGKSTLVNTLFKSQ-NREE--KIPKTV-EIKAIGHVI---VKMKLTVI 53 usage_00173.pdb 1 KKLTIGLIGNPNSGKTTLFNQLTG----SRQRV--------RKEGQFST---TDHQVTLV 45 usage_00187.pdb 1 FVFNILCVGETGIGKSTLLETLFN---------QKFDFSPKLKAVTYDLK-EANVKLKLT 50 usage_00582.pdb 1 FEFNIMVVGQSGLGKSTLINTLFKSK----E--RIPKTI-EIKSITHDI---ERMKLTVI 50 f fnI vG g GKsTL ntLf K klt usage_00058.pdb 50 DTP- 52 usage_00059.pdb 54 DTPG 57 usage_00123.pdb 48 DT-- 49 usage_00150.pdb 54 DT-- 55 usage_00173.pdb 46 DLP- 48 usage_00187.pdb 51 VVE- 53 usage_00582.pdb 51 DT-- 52 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################