################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:11 2021 # Report_file: c_1227_198.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00046.pdb # 2: usage_00242.pdb # 3: usage_00727.pdb # 4: usage_01433.pdb # 5: usage_01692.pdb # 6: usage_01887.pdb # 7: usage_02087.pdb # # Length: 29 # Identity: 3/ 29 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 29 ( 17.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 29 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 HRL-FVVDENLKLEGILSLADILNYII-- 26 usage_00242.pdb 1 -RHVPVEE-NGRLAGIISIGDVVKARI-- 25 usage_00727.pdb 1 HRL-VVVDEHDVVKGIVSLSDILQALVLT 28 usage_01433.pdb 1 -YI-YVVDEKGRLKGVLSLRDLIVA---- 23 usage_01692.pdb 1 HRL-VVVDEHDVVKGIVSLSDILQALV-- 26 usage_01887.pdb 1 -HA-IVIDEFGGVSGLVTIEDILELI--- 24 usage_02087.pdb 1 -RL-VVVDEHDVVKGIVSLSDILQALVLT 27 V d G s D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################