################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:17 2021 # Report_file: c_0407_14.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00058.pdb # 2: usage_00095.pdb # 3: usage_00120.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00130.pdb # 7: usage_00131.pdb # 8: usage_00132.pdb # 9: usage_00182.pdb # 10: usage_00183.pdb # 11: usage_00184.pdb # 12: usage_00185.pdb # 13: usage_00186.pdb # 14: usage_00187.pdb # # Length: 84 # Identity: 6/ 84 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 84 ( 17.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 84 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 -------KPQVTDVTKNSVTLSWQPGT-P-GTLPASAYIIEAFSQSVSNSWQTVAN-HVK 50 usage_00095.pdb 1 ----APQHLTVEDVTDTTTTLKWRPPDRIGA-GGIDGYLVEYCLE-GSEEWVPANKEPVE 54 usage_00120.pdb 1 -TPGPPQDLKVKEVTKTSVTLTWDPPLLDGG-SKIKNYIVEKRES-TRKAYSTVATN-CH 56 usage_00128.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00129.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00130.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00131.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00132.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00182.pdb 1 ------LDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 52 usage_00183.pdb 1 -TPAAPLDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 57 usage_00184.pdb 1 STPAAPLDVKCLEANKDYIIISWKQPAVD---SPILGYFIDKCEV-GTDSWSQCNDTPVK 56 usage_00185.pdb 1 -TPAAPLDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 57 usage_00186.pdb 1 -TPAAPLDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 57 usage_00187.pdb 1 STPAAPLDVKCLEANKDYIIISWKQPAVDGG-SPILGYFIDKCEV-GTDSWSQCNDTPVK 58 k W p i Y w v usage_00058.pdb 51 TTLYTVRGLRPNTIYLFMVRAINP 74 usage_00095.pdb 55 RCGFTVKDLPTGARILFRVVGVNI 78 usage_00120.pdb 57 KTSWKVDQLQEGCSYYFRVLAENE 80 usage_00128.pdb 53 FARFPVTGLIEGRSYIFRVRAVNK 76 usage_00129.pdb 53 FARFPVTGLIEGRSYIFRVRA--- 73 usage_00130.pdb 53 FARFPVTGLIEGRSYIFRVRA--- 73 usage_00131.pdb 53 FARFPVTGLIEGRSYIFRVRA--- 73 usage_00132.pdb 53 FARFPVTGLIEGRSYIFRVRA--- 73 usage_00182.pdb 53 FARFPVTGLIEGRSYIFRVRAVN- 75 usage_00183.pdb 58 FARFPVTGLIEGRSYIFRVRAVN- 80 usage_00184.pdb 57 FARFPVTGLIEGRSYIFRVRAVNK 80 usage_00185.pdb 58 FARFPVTGLIEGRSYIFRVRA--- 78 usage_00186.pdb 58 FARFPVTGLIEGRSYIFRVRAVN- 80 usage_00187.pdb 59 FARFPVTGLIEGRSYIFRVRAVN- 81 V L g y FrV a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################