################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:46:27 2021 # Report_file: c_0274_5.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00038.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00047.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # 9: usage_00053.pdb # 10: usage_00062.pdb # 11: usage_00063.pdb # 12: usage_00064.pdb # 13: usage_00065.pdb # 14: usage_00066.pdb # 15: usage_00067.pdb # 16: usage_00086.pdb # 17: usage_00089.pdb # # Length: 190 # Identity: 162/190 ( 85.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 162/190 ( 85.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/190 ( 12.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00039.pdb 1 ----------------------SSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 38 usage_00040.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00047.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00049.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEIVRNYNVESTWFIEGYTPPV 60 usage_00050.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEIVRNYNVESTWFIEGYTPPV 60 usage_00051.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00052.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00053.pdb 1 ----------------------SSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 38 usage_00062.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00063.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00064.pdb 1 ----------------------SSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 38 usage_00065.pdb 1 ----------------------SSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 38 usage_00066.pdb 1 ----------------------SSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 38 usage_00067.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEIVRNYNVESTWFIEGYTPPV 60 usage_00086.pdb 1 PDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 60 usage_00089.pdb 1 ---------------------LSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPV 39 SSAGRSHIVCHAIERMKE VRNYNVESTWFIEGYTPPV usage_00038.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00039.pdb 39 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIIWRVIDDTATYEV 98 usage_00040.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIIWRVIDDTATYEV 120 usage_00047.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00049.pdb 61 SEYLSNALATTTYYLLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00050.pdb 61 SEYLSNALATTTYYLLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00051.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00052.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00053.pdb 39 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 98 usage_00062.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00063.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00064.pdb 39 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 98 usage_00065.pdb 39 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 98 usage_00066.pdb 39 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 98 usage_00067.pdb 61 SEYLSNALATTTYYLLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00086.pdb 61 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 120 usage_00089.pdb 40 SEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEV 99 SEYLSNALATTTYY LATTSYLGMKSATEQDFEWLSKNPKILEASVII RVIDDTATYEV usage_00038.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00039.pdb 99 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 158 usage_00040.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00047.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00049.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00050.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00051.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00052.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00053.pdb 99 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 158 usage_00062.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00063.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00064.pdb 99 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 158 usage_00065.pdb 99 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 158 usage_00066.pdb 99 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 158 usage_00067.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00086.pdb 121 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 180 usage_00089.pdb 100 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN 159 EKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILN usage_00038.pdb 181 LARIVEVTYI 190 usage_00039.pdb 159 LARIVEVT-- 166 usage_00040.pdb 181 LARIVEVTYI 190 usage_00047.pdb 181 LARIVEVTYI 190 usage_00049.pdb 181 LARIIEVTYI 190 usage_00050.pdb 181 LARIIEVTYI 190 usage_00051.pdb 181 LARIVEVTYI 190 usage_00052.pdb 181 LARIVEVTYI 190 usage_00053.pdb 159 LARIVEVTYI 168 usage_00062.pdb 181 LARIVEVTYI 190 usage_00063.pdb 181 LARIVEVTYI 190 usage_00064.pdb 159 LARIVEVTYI 168 usage_00065.pdb 159 LARIVEVTYI 168 usage_00066.pdb 159 LARIVEVTYI 168 usage_00067.pdb 181 LARIIEVTYI 190 usage_00086.pdb 181 LARIVEVTYI 190 usage_00089.pdb 160 LARIVEVTYI 169 LARI EVT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################