################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:23 2021 # Report_file: c_1442_672.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00315.pdb # 2: usage_00316.pdb # 3: usage_00319.pdb # 4: usage_00320.pdb # 5: usage_12522.pdb # 6: usage_12562.pdb # 7: usage_12563.pdb # 8: usage_12564.pdb # 9: usage_12565.pdb # 10: usage_13761.pdb # 11: usage_13762.pdb # 12: usage_14671.pdb # 13: usage_14672.pdb # 14: usage_19698.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 40 ( 17.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 40 ( 65.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00315.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_00316.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_00319.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_00320.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_12522.pdb 1 L-----SFTIPSLSK---PSV-------YHEPSKVVYS-- 23 usage_12562.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_12563.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_12564.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_12565.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_13761.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_13762.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_14671.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_14672.pdb 1 -KGTL-PVDIPSVTK---PG-NTLY-PLGYG-------LN 26 usage_19698.pdb 1 -----VIRAPIHFGFAANVG-NTI-YIDGLA-------IV 26 ips k pg g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################