################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:31 2021 # Report_file: c_1415_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00090.pdb # 2: usage_00141.pdb # 3: usage_00142.pdb # 4: usage_00977.pdb # 5: usage_00978.pdb # 6: usage_01185.pdb # 7: usage_01469.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 56 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 56 ( 60.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 LLD-----------RLRKHQGHF-L-LGTLSRYAVQVA-------EGMGYLESKR- 35 usage_00141.pdb 1 --------------SPQKLQ-QM-P-KMYLDVLASRLGKSVVDIYSLSGQMAAWS- 38 usage_00142.pdb 1 --------------SPQKLQ-QM-P-KMYLDVLASRLGKSVVDIYSLSGQMAAWS- 38 usage_00977.pdb 1 --------------SPQKLQ-QM-P-KMYLDVLASRLGKSVVDIYSLSGQMAAWS- 38 usage_00978.pdb 1 ---------------PQKLQ-QM-P-KMYLDVLASRLGKSVVDIYSLSGQMAAWS- 37 usage_01185.pdb 1 ---SPQVQPTLRRNQEQLYS-FLERHSPYFRSHSAQIR----------SA-----T 37 usage_01469.pdb 1 --------------SPQKLQ-QM-P-KMYLDVLASRLGKSVVDIYSLSGQMAAWS- 38 qk q yl a g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################