################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:38 2021 # Report_file: c_1434_106.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00554.pdb # 2: usage_00555.pdb # 3: usage_00563.pdb # 4: usage_00564.pdb # 5: usage_00566.pdb # 6: usage_00568.pdb # 7: usage_00861.pdb # 8: usage_01707.pdb # 9: usage_03179.pdb # 10: usage_03180.pdb # 11: usage_03183.pdb # 12: usage_03184.pdb # # Length: 64 # Identity: 9/ 64 ( 14.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 64 ( 68.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00554.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00555.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00563.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00564.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00566.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00568.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_00861.pdb 1 --------TGEAMQALFVSSD-YYNENDW-NCQQTLNTVLTEISQGAFSNPNAAAQVLPA 50 usage_01707.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_03179.pdb 1 -----CRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 46 usage_03180.pdb 1 -----CRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 46 usage_03183.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 usage_03184.pdb 1 ERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQ---------QPEAAAGVLEY 51 yakAlhykelefq gptpail slisinNklq qPeAAAgVLey usage_00554.pdb 52 AMKH 55 usage_00555.pdb 52 AMKH 55 usage_00563.pdb 52 AMKH 55 usage_00564.pdb 52 AMKH 55 usage_00566.pdb 52 AMKH 55 usage_00568.pdb 52 AMKH 55 usage_00861.pdb 51 LMG- 53 usage_01707.pdb 52 AMKH 55 usage_03179.pdb 47 AMKH 50 usage_03180.pdb 47 AMKH 50 usage_03183.pdb 52 AMKH 55 usage_03184.pdb 52 AMKH 55 aMk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################