################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:11:30 2021 # Report_file: c_0449_5.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00009.pdb # 2: usage_00087.pdb # 3: usage_00089.pdb # 4: usage_00090.pdb # 5: usage_00091.pdb # 6: usage_00092.pdb # 7: usage_00093.pdb # 8: usage_00094.pdb # 9: usage_00095.pdb # 10: usage_00096.pdb # 11: usage_00097.pdb # 12: usage_00098.pdb # 13: usage_00099.pdb # 14: usage_00100.pdb # 15: usage_00101.pdb # 16: usage_00102.pdb # 17: usage_00103.pdb # 18: usage_00104.pdb # 19: usage_00105.pdb # # Length: 124 # Identity: 96/124 ( 77.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/124 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/124 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RYGEGVYALRNMD-E-GFV--PELY 55 usage_00087.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPV---------------------PELY 39 usage_00089.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RYGEG--VYALRNMDEGFV--PELY 55 usage_00090.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVAIVAAEP-R-----------------V--PELY 40 usage_00091.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R----------------FV--PELY 41 usage_00092.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RYGEGVYALRNMD-E-GFV--PELY 55 usage_00093.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R---------------GFV--PELY 42 usage_00094.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R--------------------PELY 39 usage_00095.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R-----------------V--PELY 40 usage_00096.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R----------------FV--PELY 41 usage_00097.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R-----YALRNMD-E-GFV--PELY 50 usage_00098.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-R---------------GFV--PELY 42 usage_00099.pdb 1 THFVAGLGTTGTLMGTGRFLREHVA-VKIVAAEP-R--------------------PELY 38 usage_00100.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RYGEGVYALRNMD-E-GFV--PELY 55 usage_00101.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP------------------FV--PELY 40 usage_00102.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RY--------------------ELY 39 usage_00103.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RYGEGVYALRNMD-E-GFV--PELY 55 usage_00104.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP--------------------RYPELY 40 usage_00105.pdb 1 THFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP-RY--------------GFV--PELY 43 THFVAGLGTTGTLMGTGRFLREHVA VkIVAAEP ELY usage_00009.pdb 56 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 115 usage_00087.pdb 40 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 99 usage_00089.pdb 56 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 115 usage_00090.pdb 41 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 100 usage_00091.pdb 42 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 101 usage_00092.pdb 56 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 115 usage_00093.pdb 43 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 102 usage_00094.pdb 40 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 99 usage_00095.pdb 41 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 100 usage_00096.pdb 42 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 101 usage_00097.pdb 51 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 110 usage_00098.pdb 43 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 102 usage_00099.pdb 39 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 98 usage_00100.pdb 56 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 115 usage_00101.pdb 41 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 100 usage_00102.pdb 40 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 99 usage_00103.pdb 56 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 115 usage_00104.pdb 41 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 100 usage_00105.pdb 44 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL 103 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIAL usage_00009.pdb 116 VVAD 119 usage_00087.pdb 100 VVA- 102 usage_00089.pdb 116 VVAD 119 usage_00090.pdb 101 VVA- 103 usage_00091.pdb 102 VVAD 105 usage_00092.pdb 116 V--- 116 usage_00093.pdb 103 VVAD 106 usage_00094.pdb 100 VVA- 102 usage_00095.pdb 101 VVAD 104 usage_00096.pdb 102 VVA- 104 usage_00097.pdb 111 V--- 111 usage_00098.pdb 103 VVAD 106 usage_00099.pdb 99 VVA- 101 usage_00100.pdb 116 VVAD 119 usage_00101.pdb 101 VVAD 104 usage_00102.pdb 100 VVAD 103 usage_00103.pdb 116 VVAD 119 usage_00104.pdb 101 VVAD 104 usage_00105.pdb 104 VVAD 107 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################