################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:09 2021 # Report_file: c_1250_32.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00111.pdb # 2: usage_01288.pdb # 3: usage_01426.pdb # 4: usage_01427.pdb # 5: usage_01442.pdb # 6: usage_01454.pdb # 7: usage_01455.pdb # 8: usage_01456.pdb # 9: usage_01457.pdb # 10: usage_01458.pdb # 11: usage_01459.pdb # 12: usage_01476.pdb # 13: usage_01477.pdb # # Length: 45 # Identity: 1/ 45 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 45 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 45 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00111.pdb 1 ---YVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVID 42 usage_01288.pdb 1 -G----VEA-------DTQAAARTYNILA-E------GRRVVVAL 26 usage_01426.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01427.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01442.pdb 1 --AEVIVITSGKGGVGKTTLTANIGTALAKL------GKKVLLID 37 usage_01454.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01455.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01456.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01457.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01458.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01459.pdb 1 --ARIIVVTSGKGGVGKTTSSAAIATGLAQK------GKKTVVID 37 usage_01476.pdb 1 I-AKVITIHNFKGGVGKTTTTAIIAMGLGAM------GKRVLLID 38 usage_01477.pdb 1 I-AKVITIHNFKGGVGKTTTTAIIAMGLGAM------GKRVLLID 38 kT a l g id #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################