################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:37 2021 # Report_file: c_1473_14.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00109.pdb # 2: usage_00140.pdb # 3: usage_01070.pdb # 4: usage_01071.pdb # 5: usage_01288.pdb # 6: usage_01289.pdb # 7: usage_01290.pdb # 8: usage_01291.pdb # 9: usage_01292.pdb # 10: usage_01293.pdb # 11: usage_01363.pdb # 12: usage_02315.pdb # 13: usage_02316.pdb # 14: usage_02319.pdb # 15: usage_02320.pdb # 16: usage_03030.pdb # # Length: 26 # Identity: 1/ 26 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 26 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 26 ( 34.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00109.pdb 1 TVRDAINQGMDEELERDEKV-FLLGE 25 usage_00140.pdb 1 TMIQALRSAMDVMLERDDNV-VVYGQ 25 usage_01070.pdb 1 TMVQALNRALDEEMAKDPRV-VVLGE 25 usage_01071.pdb 1 TMVQALNRALDEEMAKDPRV-VVLGE 25 usage_01288.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01289.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01290.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01291.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01292.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01293.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_01363.pdb 1 -------KHIARLAENDPNKVIFTP- 18 usage_02315.pdb 1 -MVQAITDALRIELKNDPNV-LIFGE 24 usage_02316.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_02319.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_02320.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 usage_03030.pdb 1 TMVQAITDALRIELKNDPNV-LIFGE 25 D v g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################