################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:43 2021 # Report_file: c_0658_36.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00222.pdb # 2: usage_00502.pdb # 3: usage_00503.pdb # 4: usage_01294.pdb # # Length: 56 # Identity: 29/ 56 ( 51.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 56 ( 64.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 56 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00222.pdb 1 -------FLQPTDDFEKSGQYPAGTVFVEGLVYYRNKWYLYYGCADSFVAVAVSD- 48 usage_00502.pdb 1 ITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIYN- 55 usage_00503.pdb 1 ITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIYNP 56 usage_01294.pdb 1 LDRLDKPFFAPEAPFEKSGQYKDGTVFIEGLVYHKKKLYLYYGCADSQVAVAV--- 53 Ff P d FEKSGQY dGTVFiEG VYyk KwYLYYGCADS V A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################