################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:12 2021 # Report_file: c_0351_7.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00004.pdb # 2: usage_00007.pdb # 3: usage_00027.pdb # 4: usage_00057.pdb # 5: usage_00068.pdb # 6: usage_00091.pdb # 7: usage_00092.pdb # 8: usage_00096.pdb # # Length: 83 # Identity: 17/ 83 ( 20.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 83 ( 36.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 83 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS--KSNPGDFTLSVRRNGAVTHIKIQNTGGY 57 usage_00007.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS--KSNPGDFTLSVRRNGAVTHIKIQNTGDY 57 usage_00027.pdb 1 LWYAGPMERAGAESILAN-RSDGTFLVRQR--VKDAAEFAISIKYNVEVKHIKIMTAEGL 57 usage_00057.pdb 1 -WFAGNMERQQTDNLLKS-HASGTYLIRERPAEA-E-RFAISIKFNDEVKHIKVVEKDNW 56 usage_00068.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS--KSNPGDFTLSVRRNGAVTHIKIQNTGDY 57 usage_00091.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS--KSNPGDFTLSVRRNGAVTHIKIQNTGDY 57 usage_00092.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS-----PGDFTLSVRRNGAVTHIKIQNTGDY 54 usage_00096.pdb 1 -WFHPNITGVEAENLLLTRGVDGSFLARPS--KSNPGDFTLSVRRNGAVTHIKIQNTGDY 57 Wf n aenlL dG fL R F S N V HIKi usage_00004.pdb 58 YDLYGGEKFATLAELVQYYM--- 77 usage_00007.pdb 58 YDLYGGEKFATLAELVQYYME-- 78 usage_00027.pdb 58 YRITEKKAFRGLTELVEFYQQNS 80 usage_00057.pdb 57 IHITEAKKFDSLLELVEYYQCH- 78 usage_00068.pdb 58 YDLYGGEKFATLAELVQYYMEH- 79 usage_00091.pdb 58 YDLYGGEKFATLAELVQYYMEH- 79 usage_00092.pdb 55 YDLYGGEKFATLAELVQYYMEH- 76 usage_00096.pdb 58 YDLYGGEKFATLAQLVQYYMEH- 79 y kF L eLV yY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################