################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:10 2021 # Report_file: c_1242_111.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00343.pdb # 2: usage_00370.pdb # 3: usage_00570.pdb # 4: usage_00993.pdb # 5: usage_01076.pdb # 6: usage_01350.pdb # 7: usage_01351.pdb # 8: usage_01490.pdb # 9: usage_01772.pdb # 10: usage_02154.pdb # 11: usage_02155.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 34 ( 47.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 34 ( 32.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00343.pdb 1 SQFFICTTKCDWLDGKH-V--------VFGRVVD 25 usage_00370.pdb 1 IYWCTADVG-WVTGHSYLLYGPLACGATTLMFE- 32 usage_00570.pdb 1 SQFFLTCDKTDWLDGKH-V--------VFGEVTE 25 usage_00993.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_01076.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_01350.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_01351.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_01490.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_01772.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_02154.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 usage_02155.pdb 1 SQFFICTAKTEWLDGKH-V--------VFGKVKE 25 sqff k wldgkh v vfg v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################