################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:09 2021 # Report_file: c_1104_34.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00223.pdb # 2: usage_00224.pdb # 3: usage_00225.pdb # 4: usage_00226.pdb # 5: usage_00238.pdb # 6: usage_00239.pdb # 7: usage_00401.pdb # 8: usage_00402.pdb # 9: usage_00403.pdb # 10: usage_00404.pdb # 11: usage_00405.pdb # # Length: 83 # Identity: 45/ 83 ( 54.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 83 ( 54.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 83 ( 20.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 --------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 46 usage_00224.pdb 1 --------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 46 usage_00225.pdb 1 --------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 46 usage_00226.pdb 1 --------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 46 usage_00238.pdb 1 -----------------LAKSVCKATTEECIGPKKKHLDYLVHCANEPNVSIPHLANLLI 43 usage_00239.pdb 1 ---------------QGLAKSVCKATTEECIGPKKKHLDYLVHCANEPNVSIPHLANLLI 45 usage_00401.pdb 1 ---------------SAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 45 usage_00402.pdb 1 -------------TGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 47 usage_00403.pdb 1 SLTDRITAAQHSVTGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 60 usage_00404.pdb 1 -------------TGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 47 usage_00405.pdb 1 --------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLF 46 K VCKATT E GPKKKHLDYL C NE NV IP LA L usage_00223.pdb 47 ERTTNSSWVVVFKSLITTHHLMV 69 usage_00224.pdb 47 ERTTNSSWVVVFKSLITTHHLMV 69 usage_00225.pdb 47 ERTTNSSWVVVFKSLITTHHLMV 69 usage_00226.pdb 47 ERTTNSSWVVVFKSLITTHHLMV 69 usage_00238.pdb 44 ERSQNANWVVVYKSLITTHHLMA 66 usage_00239.pdb 46 ERSQNANWVVVYKSLITTHHLMA 68 usage_00401.pdb 46 ERTTNSSWVVVFKSLITTHHLMV 68 usage_00402.pdb 48 ERTTNSSWVVVFKSLITTHHLMV 70 usage_00403.pdb 61 ERTTNSSWVVVFKSLITTHHLMV 83 usage_00404.pdb 48 ERTTNSSWVVVFKSLITTHHLMV 70 usage_00405.pdb 47 ERTTNSSWVVVFKSLITTHHLMV 69 ER N WVVV KSLITTHHLM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################