################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:51 2021 # Report_file: c_1376_49.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00983.pdb # 2: usage_01118.pdb # 3: usage_01204.pdb # 4: usage_01205.pdb # 5: usage_01206.pdb # 6: usage_01207.pdb # # Length: 61 # Identity: 13/ 61 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 61 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 61 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00983.pdb 1 -----------------ETTTNLISNAMYSILE-TPGVYEELRSHPELMPQAVEEALRFR 42 usage_01118.pdb 1 ------------------TTSHLLANSFYSLLYDDKEVYQELHENLDLVPQAVEEMLRFR 42 usage_01204.pdb 1 TDEEIVGFSILLLIAGNETTTNLISNTIYCLME-DKASFERLKREKELLPSGIEEVLRYR 59 usage_01205.pdb 1 TDEEIVGFSILLLIAGNETTTNLISNTIYCLME-DKASFERLKREKELLPSGIEEVLRYR 59 usage_01206.pdb 1 -----------------ETTTNLISNTIYCLME-DKASFERLKREKELLPSGIEEVLRYR 42 usage_01207.pdb 1 TDEEIVGFSILLLIAGNETTTNLISNTIYCLME-DKASFERLKREKELLPSGIEEVLRYR 59 TTtnLisN Y l e dk e L eL P EE LR R usage_00983.pdb 43 A 43 usage_01118.pdb 43 F 43 usage_01204.pdb 60 S 60 usage_01205.pdb 60 S 60 usage_01206.pdb 43 S 43 usage_01207.pdb 60 S 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################