################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:47 2021 # Report_file: c_1414_27.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00082.pdb # 4: usage_00231.pdb # 5: usage_00260.pdb # 6: usage_00363.pdb # 7: usage_00498.pdb # 8: usage_00499.pdb # 9: usage_00500.pdb # 10: usage_00548.pdb # 11: usage_00574.pdb # 12: usage_00595.pdb # 13: usage_00648.pdb # 14: usage_00649.pdb # # Length: 111 # Identity: 52/111 ( 46.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/111 ( 51.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/111 ( 36.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 SPEQLGMIEKLVAAQQ--QCNRR--SFSDRLRVTPWP-----IAPD-PQSR-EARQQRFA 49 usage_00032.pdb 1 SPEQLGMIEKLVAAQQ--QCNRR--SFSDRLRVTPWP-----IAPD-PQSR-EARQQRFA 49 usage_00082.pdb 1 TAAQELMIQQLVAAQL--QCNKR--S------VTPW-------------SR-DARQQRFA 36 usage_00231.pdb 1 SPEQLGMIEKLVAAQQ--QCNRR--S-------------------------FEARQQRFA 31 usage_00260.pdb 1 -PEQLGMIEKLVAAQQ-R--------------VTPWP------------SR-EARQQRFA 31 usage_00363.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWP-----L-------G-DARQQRFA 43 usage_00498.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWPADPAS--------G-SASQQRFA 47 usage_00499.pdb 1 TAAQ-ELIQQLVAAQL--QCNKRPK-------VTPWP-----L---------DARQQRFA 36 usage_00500.pdb 1 SPEQLGMIEKLVAAQQLR--------------VTPWP------------SR-EARQQRFA 33 usage_00548.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWP-----L-------G-SASQQRFA 43 usage_00574.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWP-----LG-AD--PR-DARQQRFA 47 usage_00595.pdb 1 SPEQLGMIEKLVAAQQ-----------------TPWP---------------EARQQRFA 28 usage_00648.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWP-----L-------G-SASQQRFA 43 usage_00649.pdb 1 TAAQELMIQQLVAAQL--QCNKR--SFSDQPKVTPWP-----LGAD-PASG-SASQQRFA 49 Q mI LVAAQ A QQRFA usage_00031.pdb 50 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRR- 99 usage_00032.pdb 50 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRR- 99 usage_00082.pdb 37 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 87 usage_00231.pdb 32 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 82 usage_00260.pdb 32 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRR- 81 usage_00363.pdb 44 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARR- 93 usage_00498.pdb 48 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 98 usage_00499.pdb 37 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEILLETA-RR- 85 usage_00500.pdb 34 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 84 usage_00548.pdb 44 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 94 usage_00574.pdb 48 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARR- 97 usage_00595.pdb 29 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 79 usage_00648.pdb 44 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 94 usage_00649.pdb 50 HFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 100 HFTELAI SVQEIVDFAKQ PGFLQL REDQIALLK S IE mLlet RR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################