################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:26 2021 # Report_file: c_0175_65.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00152.pdb # 2: usage_00153.pdb # 3: usage_00154.pdb # 4: usage_00562.pdb # 5: usage_00563.pdb # # Length: 161 # Identity: 77/161 ( 47.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 77/161 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/161 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00152.pdb 1 -----RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV---SNIDKVQMLLYFKQLGA 52 usage_00153.pdb 1 DK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV---SNIDKVQMLLYFKQLGA 56 usage_00154.pdb 1 -----RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV---SNIDKVQMLLYFKQLGA 52 usage_00562.pdb 1 -----RILLIGATGYIGRHVAKASLDLGHPTFLLVRES--TASSNSEKAQLLESFKASGA 53 usage_00563.pdb 1 -GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES--TASSNSEKAQLLESFKASGA 57 R L G TGYIG AS LGHPT L R SN K Q L FK GA usage_00152.pdb 53 KLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEF 112 usage_00153.pdb 57 KLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEF 116 usage_00154.pdb 53 KLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEF 112 usage_00562.pdb 54 NIVHGSIDDHASLVEAVKNVDVVISTVGS----LQIESQVNIIKAIKEVGTVKRFFPSEF 109 usage_00563.pdb 58 NIVHGSIDDHASLVEAVKNVDVVISTVGS----LQIESQVNIIKAIKEVGTVKRFFPSEF 113 S DDH LV A K VDVVIS I Q AIKE G KRF PSEF usage_00152.pdb 113 GMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVS-- 151 usage_00153.pdb 117 GMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 157 usage_00154.pdb 113 GMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS- 152 usage_00562.pdb 110 GNDVDNV-HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 149 usage_00563.pdb 114 GNDVDNV-HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 153 G D D HA P F K KVRRAIEA IPYTYVS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################