################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:57 2021 # Report_file: c_1319_235.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00006.pdb # 2: usage_01822.pdb # 3: usage_01823.pdb # # Length: 52 # Identity: 3/ 52 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 52 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 52 ( 48.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 YQEWHSQLQSLYDSQIFHNW------ALSQDVHL-----NDE-KDGLLLR-- 38 usage_01822.pdb 1 --DAV---DDLEAMMAEW--YQDGKGIITGYVFS---DDENPPAEGDDHGLR 42 usage_01823.pdb 1 --------DDLEAMMAEW--YQDGKGIITGYVFSDDE---NPPAEGDDHG-- 37 ddLeammaew iitgyVfs np aeGddhg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################