################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:39:32 2021 # Report_file: c_1134_52.html ################################################################################################ #==================================== # Aligned_structures: 60 # 1: usage_00001.pdb # 2: usage_00204.pdb # 3: usage_00217.pdb # 4: usage_00218.pdb # 5: usage_00219.pdb # 6: usage_00220.pdb # 7: usage_00221.pdb # 8: usage_00222.pdb # 9: usage_00223.pdb # 10: usage_00224.pdb # 11: usage_00225.pdb # 12: usage_00226.pdb # 13: usage_00227.pdb # 14: usage_00228.pdb # 15: usage_00266.pdb # 16: usage_00267.pdb # 17: usage_00268.pdb # 18: usage_00269.pdb # 19: usage_00277.pdb # 20: usage_00278.pdb # 21: usage_00335.pdb # 22: usage_00338.pdb # 23: usage_00342.pdb # 24: usage_00346.pdb # 25: usage_00347.pdb # 26: usage_00348.pdb # 27: usage_00367.pdb # 28: usage_00372.pdb # 29: usage_00389.pdb # 30: usage_00390.pdb # 31: usage_00391.pdb # 32: usage_00392.pdb # 33: usage_00393.pdb # 34: usage_00395.pdb # 35: usage_00396.pdb # 36: usage_00397.pdb # 37: usage_00398.pdb # 38: usage_00401.pdb # 39: usage_00402.pdb # 40: usage_00403.pdb # 41: usage_00404.pdb # 42: usage_00405.pdb # 43: usage_00415.pdb # 44: usage_00453.pdb # 45: usage_00454.pdb # 46: usage_00455.pdb # 47: usage_00456.pdb # 48: usage_00457.pdb # 49: usage_00510.pdb # 50: usage_00511.pdb # 51: usage_00533.pdb # 52: usage_00537.pdb # 53: usage_00540.pdb # 54: usage_00552.pdb # 55: usage_00554.pdb # 56: usage_00559.pdb # 57: usage_00560.pdb # 58: usage_00561.pdb # 59: usage_00562.pdb # 60: usage_00563.pdb # # Length: 55 # Identity: 48/ 55 ( 87.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 55 ( 87.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 55 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00204.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00217.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 50 usage_00218.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00219.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 49 usage_00220.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 49 usage_00221.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00222.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMY---- 48 usage_00223.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 49 usage_00224.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 49 usage_00225.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 50 usage_00226.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00227.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMY---- 48 usage_00228.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 49 usage_00266.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00267.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00268.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00269.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00277.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00278.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00335.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00338.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00342.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00346.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00347.pdb 1 --HMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGG 53 usage_00348.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00367.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00372.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00389.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00390.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00391.pdb 1 --AMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00392.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMY---- 48 usage_00393.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00395.pdb 1 GMAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 53 usage_00396.pdb 1 GMAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 53 usage_00397.pdb 1 -MAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 52 usage_00398.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00401.pdb 1 --AMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00402.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00403.pdb 1 --AMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00404.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00405.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00415.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00453.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00454.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00455.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00456.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00457.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00510.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYS--- 50 usage_00511.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00533.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00537.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00540.pdb 1 --SMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 51 usage_00552.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00554.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDG- 51 usage_00559.pdb 1 GMAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 53 usage_00560.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 50 usage_00561.pdb 1 -MAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 52 usage_00562.pdb 1 -MAMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD-- 52 usage_00563.pdb 1 ---MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDF- 51 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################