################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:44 2021 # Report_file: c_0941_102.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00358.pdb # 2: usage_00359.pdb # 3: usage_00522.pdb # 4: usage_01480.pdb # 5: usage_01966.pdb # 6: usage_02019.pdb # # Length: 67 # Identity: 2/ 67 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 67 ( 26.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 67 ( 73.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00358.pdb 1 -------------------LSYHDGALVVTKAGYYYIYSKVQLGGVGCAST--IT--HG- 36 usage_00359.pdb 1 -------------------LSYHDGALVVTKAGYYYIYSKVQLGGVGCAST--IT--HG- 36 usage_00522.pdb 1 -------------------LSYHDGALVVTKAGYYYIYSKVQLGGVGCPLA--STITHG- 38 usage_01480.pdb 1 -------------------LSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLAST-ITH- 39 usage_01966.pdb 1 -------------------LSYHDGALVVTKAGYYYIYSKVQLGGVGCAST--IT--HG- 36 usage_02019.pdb 1 LVIAGLKGRTYGHVAVVISGPLYRQK-----------YPMCWCGSIAG-----------A 38 lsyhdga YskvqlGgvgc usage_00358.pdb ------- usage_00359.pdb ------- usage_00522.pdb ------- usage_01480.pdb 40 ------G 40 usage_01966.pdb ------- usage_02019.pdb 39 VGQSQG- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################