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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 01:03:20 2021
# Report_file: c_1105_68.html
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#====================================
# Aligned_structures: 13
#   1: usage_00219.pdb
#   2: usage_00221.pdb
#   3: usage_00223.pdb
#   4: usage_00224.pdb
#   5: usage_00226.pdb
#   6: usage_00228.pdb
#   7: usage_00359.pdb
#   8: usage_00361.pdb
#   9: usage_00363.pdb
#  10: usage_00365.pdb
#  11: usage_00395.pdb
#  12: usage_00946.pdb
#  13: usage_00950.pdb
#
# Length:        125
# Identity:       59/125 ( 47.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     95/125 ( 76.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           30/125 ( 24.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00219.pdb         1  ----------------PALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   44
usage_00221.pdb         1  LSYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   56
usage_00223.pdb         1  ---GLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   57
usage_00224.pdb         1  ----------------PALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   44
usage_00226.pdb         1  LSYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   56
usage_00228.pdb         1  ---GLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   57
usage_00359.pdb         1  ---------------APALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   45
usage_00361.pdb         1  -SYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   55
usage_00363.pdb         1  ---------------APALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   45
usage_00365.pdb         1  ----LSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   56
usage_00395.pdb         1  ----SSEEA-KGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT   55
usage_00946.pdb         1  --------------QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   46
usage_00950.pdb         1  --------------QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS   46
                                           paLYaLsllvVFLcLAALYESWSIPfsVmLVvPLGvIGAllats

usage_00219.pdb        45  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   93
usage_00221.pdb        57  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  105
usage_00223.pdb        58  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  106
usage_00224.pdb        45  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   93
usage_00226.pdb        57  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  105
usage_00228.pdb        58  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  106
usage_00359.pdb        46  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   94
usage_00361.pdb        56  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  104
usage_00363.pdb        46  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   94
usage_00365.pdb        57  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA  105
usage_00395.pdb        56  GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAALEA  115
usage_00946.pdb        47  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   95
usage_00950.pdb        47  MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA   95
                           mRg           lsNDvfFQVGllTtiGLSAKNAILIvEFAKeLheQGKgiVEAAiEA

usage_00219.pdb        94  CRMR-   97
usage_00221.pdb       106  CRMR-  109
usage_00223.pdb       107  CRM--  109
usage_00224.pdb        94  CRMR-   97
usage_00226.pdb       106  CRMR-  109
usage_00228.pdb       107  CRM--  109
usage_00359.pdb        95  CRM--   97
usage_00361.pdb       105  CRMR-  108
usage_00363.pdb        95  CRM--   97
usage_00365.pdb       106  CR---  107
usage_00395.pdb       116  ARLR-  119
usage_00946.pdb        96  CRMRL  100
usage_00950.pdb        96  CRM--   98
                           cR   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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