################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:39 2021 # Report_file: c_0656_163.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00194.pdb # 2: usage_00236.pdb # 3: usage_00615.pdb # 4: usage_00657.pdb # 5: usage_00733.pdb # 6: usage_00809.pdb # 7: usage_00842.pdb # 8: usage_01136.pdb # 9: usage_01219.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 74 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 74 ( 68.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00194.pdb 1 ----PSV----------SVAPGQTARITCGGN----------NI---G-SKSVHWYQQ-K 31 usage_00236.pdb 1 ------I----------SVSR--GDVRVFKFSLPVDLNSGDY-------LLSFGISAG-N 34 usage_00615.pdb 1 --PT--L----------VAQK-ATLRLRLLNA----------S-N----ARYYRLALQ-D 29 usage_00657.pdb 1 VS--YATDDGQNLSGKFKADKPGRYYIHLYMFN-----G--S-------YMPYRINIE-G 43 usage_00733.pdb 1 ----SSV----------SANPGGTVEITCSGG----------G-RYYDGSYYYGWYQQ-K 34 usage_00809.pdb 1 ----PSV----------SVAPGQTARISCSGD----------SL---G-SYFVHWYQQ-K 31 usage_00842.pdb 1 ----PLV----------SVALGQKATITCSGD----------KL---S-DVYVHWYQQ-K 31 usage_01136.pdb 1 ----PSV----------SVSPGQTATITCSGA------------S-----TNVCWYQV-K 28 usage_01219.pdb 1 ----SSV----------SANPGETVKITCSGG----------G----S-SSNYGWFQQKS 31 usage_00194.pdb 32 -PGQAPVLVVYD-- 42 usage_00236.pdb 35 -PQTDMTPLDRRYD 47 usage_00615.pdb 30 ---HPLYLIAAD-- 38 usage_00657.pdb -------------- usage_00733.pdb 35 SPGSAPVTVIYE-- 46 usage_00809.pdb 32 -PGQAPVLVIYD-- 42 usage_00842.pdb 32 -AGQAPVLVIYE-- 42 usage_01136.pdb 29 -PGQSPEVVIFE-- 39 usage_01219.pdb 32 -PGSAPVTVIYN-- 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################