################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:22 2021 # Report_file: c_1115_62.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00061.pdb # 2: usage_00063.pdb # 3: usage_00140.pdb # 4: usage_00180.pdb # 5: usage_00524.pdb # 6: usage_00858.pdb # 7: usage_01526.pdb # # Length: 87 # Identity: 3/ 87 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 87 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 87 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00061.pdb 1 SPEELKGIFEKYAAKEGDPNQLSKE-ELKLLLQTEFPSLLK-G-G-STLDELFEELDKNG 56 usage_00063.pdb 1 -PEELKGIFEKYAAKEGDPNQLSKE-ELKLLLQTEFPSLLK-G-G-STLDELFEELDKNG 55 usage_00140.pdb 1 SPAELKSIFEKYAAKEGDPNQLSKE-ELKQLIQAEFPSLLK-G-PR-TLDDLFQELDKNG 56 usage_00180.pdb 1 SPEELKGIFEKYAAKEGDPNQLSKE-ELKLLLQTEFPSLLK-G-G-STLDELFEELDKNG 56 usage_00524.pdb 1 ----VEEEINQAKQSSP--------KQLKTILVRLLP------------KKLVELWIE-Q 35 usage_00858.pdb 1 -PEELKGIFEKYAAKEGDPNQLSKE-ELKLLLQTEFPSLLK-G--MSTLDELFEELDKNG 55 usage_01526.pdb 1 SPEEIKGAFEVFAAKEGDPNQISKE-ELKLVMQTLG-PSLLKGM--STLDEMIEEVDKNG 56 k fe aakeg eLK q d l ee dk g usage_00061.pdb 57 D-G-------EVSFEEFQVLVKKI--- 72 usage_00063.pdb 56 D-G-------EVSFEEFQVLVKKI--- 71 usage_00140.pdb 57 D-G-------EVSFEEFQVLVK----- 70 usage_00180.pdb 57 D-G-------EVSFEEFQVLVKKISQ- 74 usage_00524.pdb 36 -GIVQDEVIANISKVRVKNLVDFIHHW 61 usage_00858.pdb 56 D-G-------EVSFEEFQVLVKKI--- 71 usage_01526.pdb 57 D-G-------EVSFEEFLVMMKKISQ- 74 g evSfeef vlvk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################