################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:17 2021 # Report_file: c_0937_68.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00131.pdb # 2: usage_00458.pdb # 3: usage_00559.pdb # 4: usage_00607.pdb # 5: usage_00608.pdb # 6: usage_00650.pdb # 7: usage_00706.pdb # 8: usage_01034.pdb # 9: usage_01087.pdb # # Length: 47 # Identity: 3/ 47 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 47 ( 34.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 47 ( 42.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00131.pdb 1 ---TAIATQGAIS-RET---QNGYYVKSYKLE-VSTNGEDWMV-Y-- 36 usage_00458.pdb 1 ---TAVGTQGAIS-KET---KKKYYVKTYKID-VSSNGEDWIT---- 35 usage_00559.pdb 1 ---TAIATQGAIS-RET---QNGYYVKSYKLE-VSTNGEDWMV---- 35 usage_00607.pdb 1 ---TAIATQGAIS-RET---QNGYYVKSYKLE-VSTNGEDWMV-YRH 38 usage_00608.pdb 1 ---TAIATQGAIS-RET---QNGYYVKSYKLE-VSTNGEDWMV---- 35 usage_00650.pdb 1 ---TAVGTQGAIS-KET---KKKYYVKTYKID-VSSNGEDWIT---- 35 usage_00706.pdb 1 ---------KVVNPDTGLEEDVLYDVRIVSTDRDS-K-GIGKVI--- 33 usage_01034.pdb 1 ---TAVGTQGAIS-KET---KKKYYVKTYRVD-ISSNGEDWIT-L-- 36 usage_01087.pdb 1 RFVTAVGTQGAIS-KET---KKKYYVKTYKID-VSSNGEDWIT---- 38 gais et YyVk y S n edw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################