################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:37 2021 # Report_file: c_1360_71.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00001.pdb # 2: usage_00041.pdb # 3: usage_00155.pdb # 4: usage_00156.pdb # 5: usage_00260.pdb # 6: usage_00342.pdb # 7: usage_00389.pdb # 8: usage_00465.pdb # 9: usage_00466.pdb # 10: usage_00537.pdb # 11: usage_00565.pdb # 12: usage_00594.pdb # 13: usage_00632.pdb # 14: usage_00773.pdb # 15: usage_00774.pdb # 16: usage_00775.pdb # 17: usage_00776.pdb # 18: usage_00777.pdb # 19: usage_00778.pdb # 20: usage_00826.pdb # 21: usage_00867.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 57 ( 71.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---SYD----AIKSAIKSASEGKL----K--G-IIGYVE------------------ 25 usage_00041.pdb 1 ---APE----KCNQVAEAVAGAG------------GKVTIT---------------- 22 usage_00155.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIPVE------------ 32 usage_00156.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00260.pdb 1 ---VSQQLDSFNQFVDYTLQDIICEDS--TLIIS-FGKIYVTK-------------- 37 usage_00342.pdb 1 ---SEP----FVKPTVEAILKAAR-----TGE-VGDGKIFVLPVE------------ 32 usage_00389.pdb 1 ---SEP----FVKPTVEAILKAAR-----TGE-VGDGKIFVLP-------------- 30 usage_00465.pdb 1 ---ADD----QLDEVIDIVSKAAY-----TGK-IGDGKIFVAE-------------- 30 usage_00466.pdb 1 ---ADD----QLDEVIDIVSKAAY-----TGK-IGDGKIFVAE-------------- 30 usage_00537.pdb 1 ---DDS----IVDKVVDSIVRAAR-----TGK-IGDGKVWVS--------------- 29 usage_00565.pdb 1 --RGDN----KTEVWDALANSIR----------------------SIDKGHLTFHPR 29 usage_00594.pdb 1 ---DDS----IVDKVVDSIVRAAR-----TGK-IGDGKVWVSP-------------- 30 usage_00632.pdb 1 ---SDD----QYEQVVEAIQKAAN-----TGR-IGDGKIFVLD-------------- 30 usage_00773.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00774.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00775.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00776.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00777.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00778.pdb 1 ---SDD----AVDEVVEAIVSSAR-----TGK-FGDGRIFVIP-------------- 30 usage_00826.pdb 1 GS-IGA----AKKDLDQKVLAIRE-SLA-AHG-GGDARVSVLK-------------- 35 usage_00867.pdb 1 ---SDD----QYEQVVEAIQKAAN-----TGR-IGDGKIFVLD-------------- 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################