################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:18 2021 # Report_file: c_1095_10.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00071.pdb # 2: usage_00221.pdb # 3: usage_00559.pdb # 4: usage_00560.pdb # 5: usage_00566.pdb # 6: usage_00567.pdb # 7: usage_00568.pdb # 8: usage_00569.pdb # 9: usage_00570.pdb # 10: usage_00618.pdb # 11: usage_00619.pdb # 12: usage_00620.pdb # 13: usage_00781.pdb # 14: usage_00782.pdb # # Length: 91 # Identity: 9/ 91 ( 9.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 91 ( 20.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 91 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNFLS 60 usage_00221.pdb 1 ----CDIWSAGVVMYFLLTGCLPFT-GTSLEEVQQKATY-K----------------PLT 38 usage_00559.pdb 1 DGSAADIWSCGVILFVILAGYLPFS-ETDLPGLYRKINAAEFDCPP-----------WFS 48 usage_00560.pdb 1 -GSAADIWSCGVILFVILAGYLPFS-ETDLPGLYRKINAAEFDCPP-----------WFS 47 usage_00566.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00567.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00568.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00569.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00570.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00618.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00619.pdb 1 -GSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 47 usage_00620.pdb 1 LGSEADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 48 usage_00781.pdb 1 ---EADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 45 usage_00782.pdb 1 ---EADVWSMGILLYVLMCGFLPFD-DDTAAALVAKIMRGKYDVPK-----------WLS 45 D WS G l v g lPF l ki s usage_00071.pdb 61 NEDIDFLKLFLRKNPAERITSEDALKHEWLA 91 usage_00221.pdb 39 PQAVDLLKQMLTKDPERRPSAAQVLHH---- 65 usage_00559.pdb 49 AEVKFLIHRILDPNPKTRIQIQGIKKD---- 75 usage_00560.pdb 48 AEVKFLIHRILDPNPKTRIQIQGIKKD---- 74 usage_00566.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00567.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00568.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00569.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00570.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00618.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00619.pdb 48 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 78 usage_00620.pdb 49 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 79 usage_00781.pdb 46 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 76 usage_00782.pdb 46 PSSILLLQQMLQVDPKKRISMKNLLNHPWIM 76 l L P Ri #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################