################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:34 2021 # Report_file: c_1460_139.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00006.pdb # 2: usage_00620.pdb # 3: usage_00695.pdb # 4: usage_00849.pdb # 5: usage_00850.pdb # 6: usage_00851.pdb # 7: usage_00852.pdb # 8: usage_01209.pdb # 9: usage_01253.pdb # 10: usage_01728.pdb # 11: usage_02049.pdb # 12: usage_02129.pdb # 13: usage_02130.pdb # 14: usage_02301.pdb # # Length: 17 # Identity: 1/ 17 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 17 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 17 ( 41.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 DILTPNIPECYKL---- 13 usage_00620.pdb 1 DYLFPNFAEAKLL---- 13 usage_00695.pdb 1 DLVTPNRLEAEAL---- 13 usage_00849.pdb 1 SLITPNLPEAAALL--- 14 usage_00850.pdb 1 SLITPNLPEAAALL--- 14 usage_00851.pdb 1 SLITPNLPEAAALL--- 14 usage_00852.pdb 1 SLITPNLPEAAALL--- 14 usage_01209.pdb 1 HTIKPNRHEAEIL---- 13 usage_01253.pdb 1 ---SLNGEYIPQSLAVL 14 usage_01728.pdb 1 SLITPNRAELREV---- 13 usage_02049.pdb 1 -IITPNQFEAELLS--- 13 usage_02129.pdb 1 TVIKPNISELYQLLN-- 15 usage_02130.pdb 1 TVIKPNISELYQLLN-- 15 usage_02301.pdb 1 SLITPNRAELREVVG-- 15 pN e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################