################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:04:53 2021 # Report_file: c_0970_16.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00549.pdb # 2: usage_00550.pdb # 3: usage_00551.pdb # 4: usage_00552.pdb # 5: usage_00760.pdb # 6: usage_00761.pdb # 7: usage_00762.pdb # 8: usage_00763.pdb # 9: usage_00764.pdb # 10: usage_00765.pdb # 11: usage_00884.pdb # 12: usage_00885.pdb # 13: usage_00886.pdb # 14: usage_00944.pdb # 15: usage_00945.pdb # 16: usage_00962.pdb # 17: usage_00963.pdb # 18: usage_01010.pdb # # Length: 68 # Identity: 36/ 68 ( 52.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 68 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 68 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00549.pdb 1 NLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 57 usage_00550.pdb 1 NLIGKSGTAELK-------RQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 50 usage_00551.pdb 1 NLIGKSGTAELK------GRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 51 usage_00552.pdb 1 --IGKSGTAELK------GRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 49 usage_00760.pdb 1 NLIGKSGTAELK--------QIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 49 usage_00761.pdb 1 NLIGKSGTAELK------GRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 51 usage_00762.pdb 1 NLIGKSGTAEL------G-RQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 50 usage_00763.pdb 1 NLIGKSGTAEL--------RQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 49 usage_00764.pdb 1 NLIGKSGTAEL---------QIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 48 usage_00765.pdb 1 NLIGKS---------------IGWFISYDKDNPNMMMAINV-----------ASYNAKIS 34 usage_00884.pdb 1 NLIGKSGTAELK------GRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 51 usage_00885.pdb 1 NLIGKSGTAELK-----TGRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 52 usage_00886.pdb 1 NLIGKSGTAELKMK----GRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 53 usage_00944.pdb 1 NLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 57 usage_00945.pdb 1 -----SGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKDVQD---KGMASYNAKIS 52 usage_00962.pdb 1 NLIGKSGTAELK-----TGRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 52 usage_00963.pdb 1 NLIGKSGTAEL------TGRQIGWFISYDKDNPNMMMAINVKD---VQDKGMASYNAKIS 51 usage_01010.pdb 1 NLIGKSGTAELK-------RQIGWFISYDKDNPNMMMAINVKD---V----MASYNAKIS 46 S IGWFISYDKDNPNMMMAINV ASYNAKIS usage_00549.pdb 58 GKVYDEL- 64 usage_00550.pdb 51 GKVYDEL- 57 usage_00551.pdb 52 GKVYDEL- 58 usage_00552.pdb 50 GKVYDEL- 56 usage_00760.pdb 50 GKVYDEL- 56 usage_00761.pdb 52 GKVYDEL- 58 usage_00762.pdb 51 GKVYDEL- 57 usage_00763.pdb 50 GKVYDELY 57 usage_00764.pdb 49 GKVYDEL- 55 usage_00765.pdb 35 GKVYDEL- 41 usage_00884.pdb 52 GKVYDEL- 58 usage_00885.pdb 53 GKVYDEL- 59 usage_00886.pdb 54 GKVYDEL- 60 usage_00944.pdb 58 GKVYDEL- 64 usage_00945.pdb 53 GKVYDEL- 59 usage_00962.pdb 53 GKVYDEL- 59 usage_00963.pdb 52 GKVYDEL- 58 usage_01010.pdb 47 GKVYDEL- 53 GKVYDEL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################