################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:36:30 2021 # Report_file: c_1396_110.html ################################################################################################ #==================================== # Aligned_structures: 47 # 1: usage_00024.pdb # 2: usage_00042.pdb # 3: usage_00049.pdb # 4: usage_00093.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00120.pdb # 8: usage_00121.pdb # 9: usage_00171.pdb # 10: usage_00191.pdb # 11: usage_00215.pdb # 12: usage_00244.pdb # 13: usage_00281.pdb # 14: usage_00295.pdb # 15: usage_00298.pdb # 16: usage_00321.pdb # 17: usage_00322.pdb # 18: usage_00323.pdb # 19: usage_00324.pdb # 20: usage_00325.pdb # 21: usage_00451.pdb # 22: usage_00452.pdb # 23: usage_00453.pdb # 24: usage_00454.pdb # 25: usage_00460.pdb # 26: usage_00461.pdb # 27: usage_00465.pdb # 28: usage_00531.pdb # 29: usage_00571.pdb # 30: usage_00572.pdb # 31: usage_00601.pdb # 32: usage_00801.pdb # 33: usage_00802.pdb # 34: usage_00804.pdb # 35: usage_00820.pdb # 36: usage_00821.pdb # 37: usage_00857.pdb # 38: usage_00868.pdb # 39: usage_00869.pdb # 40: usage_00894.pdb # 41: usage_00941.pdb # 42: usage_01204.pdb # 43: usage_01205.pdb # 44: usage_01529.pdb # 45: usage_01690.pdb # 46: usage_01725.pdb # 47: usage_01776.pdb # # Length: 117 # Identity: 14/117 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/117 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 62/117 ( 53.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -------EWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 52 usage_00042.pdb 1 -------EWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 52 usage_00049.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00093.pdb 1 --------WIWLALGTALMGLGTLYFLVKGMG-----DAKKFYAITTLVPAIAFTMYLSM 47 usage_00110.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00111.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00120.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00121.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00171.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00191.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLAPAIAFTMYLSM 51 usage_00215.pdb 1 -----RPEWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 54 usage_00244.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00281.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00295.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00298.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00321.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00322.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00323.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00324.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00325.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00451.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMFLSM 51 usage_00452.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVAAIAFTMFLSM 51 usage_00453.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAIATLVPAIAFTMYLSM 51 usage_00454.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAIATLVAAIAFTMYLSM 51 usage_00460.pdb 1 --------WIWLALGTALMGLGVLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00461.pdb 1 --------WIWLALGTALMGLGVLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00465.pdb 1 ------PEWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 53 usage_00531.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00571.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKPFYAITTLVPAIAFTMYLSM 51 usage_00572.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKPFYAITTLVPAIAFTMYLSM 51 usage_00601.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM--G---DAKKFYAITTLVPAIAFTMYLSM 47 usage_00801.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00802.pdb 1 -------EWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 52 usage_00804.pdb 1 SFGEYWLVFNMLSLTIAGMLAAFVFFLLARS--YVAPRYHIALYLSALIVFIAGYHYLRI 58 usage_00820.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00821.pdb 1 -----RPEWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 54 usage_00857.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00868.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00869.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_00894.pdb 1 ------------ALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 47 usage_00941.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_01204.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_01205.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_01529.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_01690.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 usage_01725.pdb 1 ------PEWIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 53 usage_01776.pdb 1 --------WIWLALGTALMGLGTLYFLVKGM-GVSDPDAKKFYAITTLVPAIAFTMYLSM 51 aLgtAlMglg lyFLvkgm dak fyai tL aIAftm Lsm usage_00024.pdb 53 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 93 usage_00042.pdb 53 LL-----G--YGLTM------VP-FGGEQNPIYWARYADWLFTTPLLLLDLALLVD- 94 usage_00049.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00093.pdb 48 LLGEQNP------------------------IYWARYADWLFTTPLLLLDLA----- 75 usage_00110.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00111.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00120.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00121.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00171.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00191.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00215.pdb 55 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 96 usage_00244.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLF--------------- 79 usage_00281.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00295.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00298.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00321.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLALDLALLV-- 92 usage_00322.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00323.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00324.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00325.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00451.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00452.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00453.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00454.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00460.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00461.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00465.pdb 54 LL-----GY----------------------IYWARYASWLF--------------- 68 usage_00531.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLALLDLALLV-- 92 usage_00571.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00572.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00601.pdb 48 LL-----G--YGLTMVP----F------QNPIYWARYADWLFTTPLLLLDLALLV-- 85 usage_00801.pdb 52 LL-----G-----------------------IYWARYASWLFTTPLLLLDLALLVD- 79 usage_00802.pdb 53 LL-----G-----------------------IYWARYASWLFTTPLLLLDLALLVD- 80 usage_00804.pdb 59 FE-----SWVGAYQLQDGVYVPT--G--KPFNDFYRYADWLLTVPLLLLELILVLG- 105 usage_00820.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_00821.pdb 55 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 95 usage_00857.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00868.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00869.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_00894.pdb 48 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPL----------L 80 usage_00941.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 usage_01204.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTAPLLLLDLALLVD- 93 usage_01205.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTAPLLLLDLALLVD- 93 usage_01529.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_01690.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLVD- 93 usage_01725.pdb 54 LL-----GY----------------------IYWARYASWLF--------------- 68 usage_01776.pdb 52 LL-----G--YGLTMVP----FGG-E--QNPIYWARYADWLFTTPLLLLDLALLV-- 92 ll iywaRYA WLf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################