################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:55 2021 # Report_file: c_0820_11.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00063.pdb # 4: usage_00108.pdb # 5: usage_00239.pdb # # Length: 82 # Identity: 8/ 82 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 82 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 82 ( 42.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 ---------LFDATLDALYSALERASGGSLEVVVSESGWPSAGAF-AATFDNGRTYLSNL 50 usage_00032.pdb 1 ---------LFDATLDALYSALERASGGSLEVVVSESGWPSAGAF-AATFDNGRTYLSNL 50 usage_00063.pdb 1 --N------LFDATLDALYSALERASGGSLEVVVSESGWPSAGAF-AATFDNGRTYLSNL 51 usage_00108.pdb 1 ---------LFDAIVDAVFAALERVGGANVAVVVSESGWPSAGGGAEASTSNAQTYNQNL 51 usage_00239.pdb 1 RLDLFIDRVSQRACLEHAIAQTAGLS--GPVYELG-LG--------------NGRTYHHL 43 lfdA lda aler s vvvs sG ty nL usage_00031.pdb 51 IQHVKRGTPKRPKRAIETYLFA 72 usage_00032.pdb 51 IQHVKRGTPKRPKRAIETYLFA 72 usage_00063.pdb 52 IQHVKRGTPKRPKRAIETYLFA 73 usage_00108.pdb 52 IRHVGGGTPRRPGKEIEAYIFE 73 usage_00239.pdb 44 RQHV-Q--------GREIYVFE 56 iqHV iE Y F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################