################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:24 2021 # Report_file: c_0245_15.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00178.pdb # 2: usage_00179.pdb # 3: usage_00180.pdb # # Length: 132 # Identity: 112/132 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 113/132 ( 85.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/132 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00178.pdb 1 IRVRSNRGVAGIDGTVSTAIGAALAYEGAHERTGSPDSPPRTIALIGDLTFVHDSSGLLI 60 usage_00179.pdb 1 -RVRSNRGVAGIDGTVSTAIGAALAYEGAHERT---DSPPRTIALIGDLTFVHDSSGLLI 56 usage_00180.pdb 1 IRVRSNRGVAGIDGTVSTAIGAALAYEGAHERTG--SSPPRTIALIGDLTFVHDSSGLLI 58 RVRSNRGVAGIDGTVSTAIGAALAYEGAHERT dSPPRTIALIGDLTFVHDSSGLLI usage_00178.pdb 61 GPTEPIPRSLTIVVSNDNGGGDVSSRIFGTPHDVDVGALCRAYHVESRQIEVDELGPTLD 120 usage_00179.pdb 57 GPTEPIPRSLTIVVSND------------P-HDVDVGALCRAYHVESRQIEVDELGPTLD 103 usage_00180.pdb 59 GPTEPIPRSLTIVVSNDNG------------HDVDVGALCRAYHVESRQIEVDELGPTLD 106 GPTEPIPRSLTIVVSND HDVDVGALCRAYHVESRQIEVDELGPTLD usage_00178.pdb 121 QPGAGMRVLEV- 131 usage_00179.pdb 104 QPGAGMRVLEVK 115 usage_00180.pdb 107 QPGAGMRVLEV- 117 QPGAGMRVLEV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################