################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:20 2021 # Report_file: c_1409_239.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01209.pdb # 2: usage_01299.pdb # 3: usage_01300.pdb # 4: usage_01429.pdb # 5: usage_01439.pdb # 6: usage_01464.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 65 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 65 ( 46.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01209.pdb 1 --SPYILSRSLEDYVRSFDSHKAYL-------TQDEVFSHAF--------SEEATHPLFK 43 usage_01299.pdb 1 AEQALYVYKRCYEDHL----P----SGSDRKTYMTLWNAW--RLEPNDA-ITHCYAKCVL 49 usage_01300.pdb 1 AEQALYVYKRCYEDHL----P----SGSDRKTYMTLWNAW--RLEPNDA-ITHCYAKCVL 49 usage_01429.pdb 1 PEEMLFIFTRCMEDNL----E----DGANRLPMLAKWKEW--INEPVDSPATQCFGKCVL 50 usage_01439.pdb 1 PEEMLFIFTRCMEDNL----E----DGANRLPMLAKWKEW--INEPVDSPATQCFGKCVL 50 usage_01464.pdb 1 ---NESVIESCSNAVQ-----GA-A----NDELKVHYRAN--EFP-DDP-VTHCFVRCIG 43 c t c c usage_01209.pdb 44 QYQED 48 usage_01299.pdb 50 TGLQ- 53 usage_01300.pdb 50 TGLQ- 53 usage_01429.pdb 51 VRTG- 54 usage_01439.pdb 51 VRTG- 54 usage_01464.pdb 44 LELN- 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################