################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:14 2021 # Report_file: c_0263_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # # Length: 132 # Identity: 15/132 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/132 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/132 ( 6.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -PKQVYDAMR-QGHTVKTAQPSPLAMKELFLPYAKENR-PCLYIAFSSKLSGTYQTAMAV 57 usage_00005.pdb 1 -PKQVYDAMR-QGHTVKTAQPSPLAMKELFLPYAKENR-PCLYIAFSSKLSGTYQTAMAV 57 usage_00014.pdb 1 TSRVLLEKIA-AGSKPTTSQVNVGQFESYFRQSAENGQ-EVLYIAFSSVLSGTYQSAVMA 58 usage_00015.pdb 1 TLDQYYDKLAASKELPKTSQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFL 60 q yd g kT Qps lf ake Lyiafss lSGtyQ a usage_00004.pdb 58 RSELLDEYPEFRLTIIDSKCASLGQGLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIF 117 usage_00005.pdb 58 RSELLDEYPEFRLTIIDSKCASLGQGLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIF 117 usage_00014.pdb 59 RDIVLEEYPQASIEIVDTLAATGGEGYLAMLAAQAREEGKSLKETKELILDVGPRLRTFF 118 usage_00015.pdb 61 IEEHP--N--LTIAFPDTKITSAPQGNLVRNALC-SRE-GDFDVIVNKIQSQIEKIEGFI 114 r e l y i D k as gqG vm A e I s e f usage_00004.pdb 118 TVDNLDYLARGG 129 usage_00005.pdb 118 TVDNLDYLARGG 129 usage_00014.pdb 119 LVDNLYHLMRGG 130 usage_00015.pdb 115 VVNDLNHLVKGG 126 VdnL L rGG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################