################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:58 2021 # Report_file: c_1391_8.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00107.pdb # 2: usage_00108.pdb # 3: usage_00128.pdb # 4: usage_00129.pdb # 5: usage_00130.pdb # 6: usage_00131.pdb # 7: usage_00133.pdb # 8: usage_00433.pdb # 9: usage_00434.pdb # 10: usage_00435.pdb # 11: usage_00436.pdb # 12: usage_00437.pdb # 13: usage_00438.pdb # 14: usage_00440.pdb # 15: usage_00441.pdb # 16: usage_00700.pdb # 17: usage_00701.pdb # # Length: 54 # Identity: 38/ 54 ( 70.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 54 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 54 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 ------LPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 48 usage_00108.pdb 1 ------LPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 38 usage_00128.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00129.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYEND- 53 usage_00130.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00131.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 usage_00133.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 usage_00433.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00434.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 usage_00435.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00436.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 usage_00437.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00438.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00440.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00441.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 usage_00700.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYENDQ 54 usage_00701.pdb 1 NIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR---------- 44 LPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################