################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:58 2021 # Report_file: c_1300_43.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00025.pdb # 2: usage_00227.pdb # 3: usage_00253.pdb # 4: usage_00298.pdb # 5: usage_00491.pdb # 6: usage_00530.pdb # 7: usage_00617.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 54 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 54 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 -VLTLVLYSLQICKA----------MAYLESINCVHRDIAVRNILVASPECVKL 43 usage_00227.pdb 1 GSQYLLNWCVQIAKG----------MNYLEDRRLVHRDLAARNVLVKTPQHVKI 44 usage_00253.pdb 1 --------AYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV------- 39 usage_00298.pdb 1 --QYLLNWCVQIAKG----------MNYLEDRRLVHRDLAARNVLVKTPQHVKI 42 usage_00491.pdb 1 -HIKLLQYTSQICKG----------MEYLGTKRYIHRDLATRNILVENENRVKI 43 usage_00530.pdb 1 ---YLLNWCVQIAKG----------MNYLEDRRLVHRDLAARNVLVKTPQHVKI 41 usage_00617.pdb 1 -SQYLLNWCVQIAKG----------MNYLEDRRLVHRDLAARNVLVKTPQHVKI 43 qi k m yL hrd a rn lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################