################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:37 2021 # Report_file: c_0592_62.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00090.pdb # 2: usage_00190.pdb # 3: usage_00424.pdb # 4: usage_00450.pdb # 5: usage_00525.pdb # 6: usage_00657.pdb # 7: usage_00660.pdb # # Length: 80 # Identity: 3/ 80 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 80 ( 11.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 80 ( 35.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 ---DFIIVDDSVFDLFTQEKLLLKSGLTTSVRTFNSAQAAIDHLRSQGADIPD--TVILL 55 usage_00190.pdb 1 ---RVLIVDDAAFMRMMLKDIITKAG-YEVAGEATNGREAVEKYKEL------KPDIVTM 50 usage_00424.pdb 1 ---RVLVVDDDSDVLASLERGLRLSG-FE-VATAVDGAEALRSATEN------RPDAIVL 49 usage_00450.pdb 1 ---RVLIVDDAAFMRMMLKDIITKAG-YEVAGEATNGREAVEKYKEL------KPDIVTM 50 usage_00525.pdb 1 ---RVLIVDDAAFMRMMLKDIITKAG-YEVAGEATNGREAVEKYKEL------KPDIVTM 50 usage_00657.pdb 1 ---RVLIAEDEALIRMDLAEMLREEG-YEIVGEAGDGQEAVELAELH------KPDLVIM 50 usage_00660.pdb 1 SMISIFIAEDQQMLLGALGSLLNLEDDMEVVGKGTTGQDAVDFVKKR------QPDVCIM 54 i D l g e g A d usage_00090.pdb 56 DLQ---INGFEFTEHYGLP- 71 usage_00190.pdb 51 DITMPEMNGIDAIKEIMKID 70 usage_00424.pdb 50 DINMPVLDGVSVVTALRAMD 69 usage_00450.pdb 51 DITMPEMN------------ 58 usage_00525.pdb 51 DITMPEMNGIDAIKEIMKI- 69 usage_00657.pdb 51 DVKMPRRDGIDAASEIASKR 70 usage_00660.pdb 55 DIEMPGKTGLEAAEEL---- 70 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################