################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:57 2021 # Report_file: c_0001_11.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # # Length: 244 # Identity: 30/244 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 119/244 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 121/244 ( 49.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 CWIYDEN--AAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADIS------D------ 46 usage_00012.pdb 1 -------SSSVREE------------------CAIYGDARV----LNQSEILAI------ 25 usage_00035.pdb 1 -------------------------------------QSEI----LA------IQGLTHE 13 usage_00036.pdb 1 --------------------------------ARVLNQSEI----LA------I------ 12 i l i usage_00011.pdb 47 ---GARISDNVTIQSSSVREECAIYGDARVLNQSEILAAQILQIYDRATVNH-----SRI 98 usage_00012.pdb 26 --QILQIYDRATVNHSRIVHQVQLYGNATITH-AFIEH--RAEVFDFALIEGDKDNNVWI 80 usage_00035.pdb 14 HAQILQIYDRATVNHSRIVHQVQLYGNATITH-AFIEH--RAEVFDFALIEGDKDNNVWI 70 usage_00036.pdb 13 ---ILQIYDRATVNHSRIVHQVQLYGNATITH-AFIEH--RAEVFDFALIEGDKDNNVWI 66 ilqIyDraTvnhSrivhqvqlYGnAtith afIeh raevfDfAlieg vwI usage_00011.pdb 99 VHQVQLYGNATITH-------AFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARVIA 151 usage_00012.pdb 81 CDCAKVYGHARVIAGTEEDAIPTLRYSSQVAEHALIEG----NCVLKHHVLVGGHAEVRG 136 usage_00035.pdb 71 CDCAKVYGHARVIAGTEEDAIPTLRYSSQVAEHALIEG----NCVLKHHVLVGGHAEVRG 126 usage_00036.pdb 67 CDCAKVYGHARVIAGTEEDAIPTLRYSSQVAEHALIEG----NCVLKHHVLVGGHAEVRG 122 cdcakvYGhArvia ptlryssqVaehALIEG NcvlkhhvlVgGHAeVrg usage_00011.pdb 152 GTEEDAIPTLRYSSQVAEHALIE------------------------------------- 174 usage_00012.pdb 137 -----GPILLDDRVLIEGHACIQGEILIERQVEISGRAAVIAFDNTIHLRG--------- 182 usage_00035.pdb 127 -----GPILLDDRVLIEGHACIQGEILIERQVEISGRAAVIAFDDNTIHLRGPKVINGED 181 usage_00036.pdb 123 -----GPILLDDRVLIEGHACIQGEILIERQVEISGRAAVIAFDDNTIHLRGPKVINGED 177 gpilLddrvliegHAcIq usage_00011.pdb ---- usage_00012.pdb ---- usage_00035.pdb 182 RITR 185 usage_00036.pdb 178 RIT- 180 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################