################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:27:39 2021 # Report_file: c_0378_50.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00146.pdb # 2: usage_00707.pdb # 3: usage_00828.pdb # 4: usage_00829.pdb # 5: usage_00841.pdb # 6: usage_00945.pdb # # Length: 114 # Identity: 31/114 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/114 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/114 ( 43.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00146.pdb 1 -----SVFIFPPSD--EQLKSGTASVVCLLNNFYPREAKVQWKVDN---ALQSGNSQESV 50 usage_00707.pdb 1 -----TVSIFPPSS--EQLTSGGASVVCFLNNFYPKDINVKWKIDG---SERQNGVLNSW 50 usage_00828.pdb 1 -----TVSIFPPSS--EQLTS-GASVVCFLNNFYPK-INVKWKIDG-SERQN-GVLNSWT 49 usage_00829.pdb 1 -----TVSIFPPSS--EQLTS-GASVVCFLNNFYPK-INVKWKIDG-SERQN-GVLNSWT 49 usage_00841.pdb 1 -----TVSIFPPSS--EQLTSGGASVVCFLNNFYPKDINVKWKIDG---SERQNGVLNSW 50 usage_00945.pdb 1 TVAAPSVFIFPPSDSQ--------SVVCLLNNFYPR-EKVQWKVDNA---------QESV 42 V IFPPS SVVC LNNFYP V WK D usage_00146.pdb 51 TEQDSKDSTYSLSS---TLTLSKADYEKHKVYACEVTHQGLSSPVTK---S--- 95 usage_00707.pdb 51 TDQDSKDSTYSMSS---TLTLTKDEYERHNSYTCEATHKTSTSPIVK---SFN- 97 usage_00828.pdb 50 DQ-DSKD-STYSMS---STLTLY-E--RHNSYTCEATHKT--STSPI---VKS- 89 usage_00829.pdb 50 DQ-DSKD-STYSMS---STLTLY-E--RHNSYTCEATHKT--STSPI---VKS- 89 usage_00841.pdb 51 TDQDSKDSTYSMSS---TLTLTKDEYERHNSYTCEATHKTSTSPIVK---SFNR 98 usage_00945.pdb 43 TEQDSKDSTYSLSSSKA----DE-K----HVYACEVTHQS--SPVKSFNR---- 81 DSKD S Y CE TH S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################