################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:33 2021 # Report_file: c_1157_144.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00324.pdb # 2: usage_00350.pdb # 3: usage_00670.pdb # 4: usage_00944.pdb # 5: usage_01018.pdb # 6: usage_01068.pdb # 7: usage_01422.pdb # 8: usage_01462.pdb # 9: usage_01772.pdb # 10: usage_01841.pdb # # Length: 34 # Identity: 1/ 34 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 34 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 34 ( 41.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00324.pdb 1 GKINCVS--NITGILLTRDGGANNTSNETFRP-- 30 usage_00350.pdb 1 -----SS--NITGLILTRDGGVSNDETEIFR--- 24 usage_00670.pdb 1 GQIRCSS--NITGLLLTRDGGKDTNGTEIFRP-- 30 usage_00944.pdb 1 GQIRCSS--NITGLLLTRDGGNSNNESEIFR--- 29 usage_01018.pdb 1 GKINCVS--NITGILLTRDGGANNTSNETFRP-- 30 usage_01068.pdb 1 ---TDINPNVILAQDTLTNNT-N---EPFTTT-- 25 usage_01422.pdb 1 GKINCVS--NITGILLTRDGGANNTSNETFRP-- 30 usage_01462.pdb 1 GQIRCSS--NITGLLLTRDGCINENGTEIFRP-- 30 usage_01772.pdb 1 ----CSS--NITGLLLTRDGGVDTTKETFRPGGG 28 usage_01841.pdb 1 GNITCKS--IITGLLLTRDGGNDDNDTETFRP-- 30 s Itg ltrdg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################