################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:07 2021 # Report_file: c_0129_25.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00068.pdb # 4: usage_00069.pdb # 5: usage_00109.pdb # 6: usage_00110.pdb # 7: usage_00111.pdb # # Length: 181 # Identity: 111/181 ( 61.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/181 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/181 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 60 usage_00067.pdb 1 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS---DHVSTWLMHERDAGRDFKAYAVDVA 57 usage_00068.pdb 1 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 60 usage_00069.pdb 1 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS-----VSTWLMHERDAGRDFKAYAVDVA 55 usage_00109.pdb 1 RIAVVTGGMGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVA 60 usage_00110.pdb 1 -IAVVTGGMGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVA 59 usage_00111.pdb 1 RIAVVTGGMGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVA 60 A VTGGMGGLG A S RL DAG V V S WL AGR F AY VDVA usage_00066.pdb 61 DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 120 usage_00067.pdb 58 DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 117 usage_00068.pdb 61 DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 120 usage_00069.pdb 56 DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 115 usage_00109.pdb 61 DHDSCQQCIEKIVRDVGPVDILVNNAGITRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPV 120 usage_00110.pdb 60 DHDSCQQCIEKIVRDVGPVDILVNNAGITRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPV 119 usage_00111.pdb 61 DHDSCQQCIEKIVRDVGPVDILVNNAGITRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPV 120 D SC C EK D G VD L NNAGITRD T K K WDAV RT LD FN TK usage_00066.pdb 121 IAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSP 180 usage_00067.pdb 118 IAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSP 177 usage_00068.pdb 121 IAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSP 180 usage_00069.pdb 116 IAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSP 175 usage_00109.pdb 121 CDGMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIARKGVTVNTVSP 180 usage_00110.pdb 120 CDGMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIARKGVTVNTVSP 179 usage_00111.pdb 121 CDGMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIARKGVTVNTVSP 180 GMVER GRIVNI SVNGS G GQ NYA AKAG HGFTK LALE A G TVNTVSP usage_00066.pdb 181 G 181 usage_00067.pdb 178 G 178 usage_00068.pdb 181 G 181 usage_00069.pdb 176 G 176 usage_00109.pdb 181 G 181 usage_00110.pdb 180 G 180 usage_00111.pdb 181 G 181 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################