################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:53 2021 # Report_file: c_0043_5.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00031.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00143.pdb # 5: usage_00197.pdb # 6: usage_00198.pdb # 7: usage_00199.pdb # 8: usage_00238.pdb # 9: usage_00240.pdb # 10: usage_00241.pdb # 11: usage_00263.pdb # 12: usage_00264.pdb # 13: usage_00277.pdb # 14: usage_00291.pdb # 15: usage_00301.pdb # 16: usage_00302.pdb # # Length: 210 # Identity: 172/210 ( 81.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 172/210 ( 81.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/210 ( 5.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00077.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00078.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00143.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00197.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00198.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00199.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00238.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00240.pdb 1 QVSLNSGYHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00241.pdb 1 QVSLNSGYHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00263.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00264.pdb 1 QVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHP 60 usage_00277.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00291.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00301.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 usage_00302.pdb 1 QVSLNSGSHFCGGSLISEQWVVSAAHCYKTRIQVRLGEHNIKVLEGNEQFINAAKIIRHP 60 QVSLNSG HFCGGSLI EQWVVSA HCYK RIQVRLGEHNI VLEGNEQFINAAKIIRHP usage_00031.pdb 61 QYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAPPATGTKCLISGWGNTASSGADYPDE 120 usage_00077.pdb 61 QYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAPPATGTKCLISGWGNTASSGADYPDE 120 usage_00078.pdb 61 QYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAPPATGTKCLISGWGNTASSGADYPDE 120 usage_00143.pdb 61 QYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGAD-PDE 119 usage_00197.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00198.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00199.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00238.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00240.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00241.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00263.pdb 61 QYDRDTLNNDIMLIKLSSRAVINAHVSTISLPTAPPATGTKCLISGWGNTASSGADYPDE 120 usage_00264.pdb 61 QYDRDTLNNDIMLIKLSSRAVINAHVSTISLPTAPPATGTKCLISGWGNTASSGADYPDE 120 usage_00277.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00291.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00301.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 usage_00302.pdb 61 KYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPAAGTECLISGWGNTLSFGADYPDE 120 Y R TL NDIMLIKLSS AVINA VSTISLPTAPPA GT CLISGWGNT S GAD PDE usage_00031.pdb 121 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQRDSGGPVVCNGQLQGVVSWG 180 usage_00077.pdb 121 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDAGGPVVCNGQLQGVVSWG 180 usage_00078.pdb 121 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDAGGPVVCNGQLQGVVSWG 180 usage_00143.pdb 120 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWG 179 usage_00197.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00198.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00199.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00238.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00240.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00241.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00263.pdb 121 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDAGGPVVCNGQLQGVVSWG 180 usage_00264.pdb 121 LQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDAGGPVVCNGQLQGVVSWG 180 usage_00277.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00291.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00301.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 usage_00302.pdb 121 LKCLDAPVLTQAECKASYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQLQGVVSWG 180 L CLDAPVL QA C ASYPGKIT MFCVGFLEGGKDSCQ D GGPVVCNGQLQGVVSWG usage_00031.pdb 181 DGCAQKNKPGVYTKVYNYV----------- 199 usage_00077.pdb 181 DGCAQKNKPGVYTKVYNYV----------- 199 usage_00078.pdb 181 DGCAQKNKPGVYTKVYNYVKWIKNTIAAN- 209 usage_00143.pdb 180 DGCAQKNKPGVYTKVYNYVKWIKNTIAANS 209 usage_00197.pdb 181 HGCAWKNRPGVYTKVYNYV----------- 199 usage_00198.pdb 181 HGCAWKNRPGVYTKVYNYV----------- 199 usage_00199.pdb 181 HGCAWKNRPGVYTKVYNYVDWIKDTIAAN- 209 usage_00238.pdb 181 HGCAWKNRPGVYTKVYNYVDWIKDTIAANS 210 usage_00240.pdb 181 HGCAWKNRPGVYTKVYNYVDWIKDTIAANS 210 usage_00241.pdb 181 HGCAWKNRPGVYTKVYNYV----------- 199 usage_00263.pdb 181 DGCAQKNKPGVYTKVYNYVKWIKNTIAANS 210 usage_00264.pdb 181 DGCAQKNKPGVYTKVYNYVKWIKNTIAANS 210 usage_00277.pdb 181 HGCAWKNRPGVYTKVYNYVDWIKDTIAAN- 209 usage_00291.pdb 181 HGCAWKNRPGVYTKVYNYV----------- 199 usage_00301.pdb 181 HGCAWKNRPGVYTKVYNYVDWIKDTIAANS 210 usage_00302.pdb 181 HGCAWKNRPGVYTKVYNYV----------- 199 GCA KN PGVYTKVYNYV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################