################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:43 2021 # Report_file: c_1405_65.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00910.pdb # 2: usage_00986.pdb # 3: usage_00987.pdb # 4: usage_00988.pdb # # Length: 84 # Identity: 2/ 84 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 84 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 84 ( 56.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00910.pdb 1 VFVFETISVILQIIYFRWTGGKRLFKRAPFHHHLELNGLPEPKIVVRMWIISILL----- 55 usage_00986.pdb 1 --TLIYT---------------------AKFGIVFPL--MYHTWNGIRHLIWDLGKGLTI 35 usage_00987.pdb 1 GPTLIYT---------------------AKFGIVFPL--MYHTWNGIRHLIWDLGKGLTI 37 usage_00988.pdb 1 -PTLIYT---------------------AKFGIVFPL--MYHTWNGIRHLIWDLGKGLTI 36 tliyt akfgivfpl myhtwngirhlIwdLg usage_00910.pdb 56 -------------AIIAISM---- 62 usage_00986.pdb 36 PQLTQSGVVVLILTVLSSVGLAAM 59 usage_00987.pdb 38 PQLTQSGVVVLILTVLSSVGLAAM 61 usage_00988.pdb 37 PQLTQSGVVVLILTVLSSVGLAAM 60 tvlssvg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################