################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:26 2021 # Report_file: c_0671_96.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00053.pdb # 2: usage_00144.pdb # 3: usage_00162.pdb # 4: usage_00722.pdb # 5: usage_00723.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 62 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 62 ( 51.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 -ATLTV---STAYMQL----SSL--------DSAVYY--CARMWYYGTYYFDYWGQGTTL 42 usage_00144.pdb 1 G------FVNYPAK---PTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASC 51 usage_00162.pdb 1 ------ATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECREVK 54 usage_00722.pdb 1 ------ATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECREVK 54 usage_00723.pdb 1 -----------------PTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASC 43 y i ct gnw p c usage_00053.pdb -- usage_00144.pdb 52 K- 52 usage_00162.pdb 55 CP 56 usage_00722.pdb 55 CP 56 usage_00723.pdb 44 K- 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################