################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:14 2021 # Report_file: c_1409_243.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00018.pdb # 2: usage_00638.pdb # 3: usage_00639.pdb # 4: usage_01372.pdb # 5: usage_01662.pdb # 6: usage_01716.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 68 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 68 ( 73.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -----SNDMTQLTLGLDR--D---SGLVSESFDER--NPAVKVMLHLAI--------SAC 40 usage_00638.pdb 1 GTGSRLEEVLQALRA---SGL---PDD--------EIPARYHRLVILIS--------SLI 38 usage_00639.pdb 1 -TGSRLEEVLQALRA---SGL---PDD--------EIPARYHRLVILIS--------SLI 37 usage_01372.pdb 1 -----------------------------------TPGELPEVINELFDIELPGPDLDAL 25 usage_01662.pdb 1 ------TKLQLEVKK---R-V---PDK--------YSLIMYRRSMFRIA--------EKI 31 usage_01716.pdb 1 -----TSHLLAPIKE---V-DTSGKHD--------VAQRLQQRVTAIMR--------YAV 35 usage_00018.pdb 41 RKQN---- 44 usage_00638.pdb 39 TAE----- 41 usage_00639.pdb 38 TAEG---- 41 usage_01372.pdb 26 TTGSWLER 33 usage_01662.pdb 32 AEET---- 35 usage_01716.pdb 36 QND----- 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################