################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:46 2021 # Report_file: c_1191_274.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00260.pdb # 2: usage_00549.pdb # 3: usage_01343.pdb # 4: usage_02029.pdb # 5: usage_02420.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 40 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 40 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00260.pdb 1 RFMM--FFTRVFGF--K-VCTIID-RAMTVYL-------- 26 usage_00549.pdb 1 --TF--LRIR-SKK--NEIMVAP-DKDYFL--IVIQNPT- 29 usage_01343.pdb 1 ----PYLRIY-AQD---GHLAFARG-PYLA--VVNA---S 26 usage_02029.pdb 1 ------NKRE-KVIERYEASFRPENGGLEV--VFR----- 26 usage_02420.pdb 1 --TF--LRIR-SKK--N-EIMVAPDKDYFL--IVIQ---- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################