################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:02 2021 # Report_file: c_0842_21.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00542.pdb # 2: usage_00544.pdb # 3: usage_00554.pdb # 4: usage_00890.pdb # 5: usage_00891.pdb # # Length: 77 # Identity: 53/ 77 ( 68.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 77 ( 68.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 77 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00542.pdb 1 -L--G-SLRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAELIGKGY 56 usage_00544.pdb 1 PL--G-SLRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAELIGKGY 57 usage_00554.pdb 1 PL--G-SLRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAELIGKGY 57 usage_00890.pdb 1 --MLGSLMRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKG 58 usage_00891.pdb 1 --MLGSLMRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKG 58 G RSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAE usage_00542.pdb 57 ELRIFDR-NVEYAR--- 69 usage_00544.pdb 58 ELRIFDR-NVEYARVHG 73 usage_00554.pdb 58 ELRIFDR-NVEYAR--- 70 usage_00890.pdb 59 YELRIFDRNVEYAR--- 72 usage_00891.pdb 59 YELRIFDRNVEYAR--- 72 NVEYAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################