################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:54 2021 # Report_file: c_1393_45.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00370.pdb # 2: usage_00446.pdb # 3: usage_00447.pdb # 4: usage_00448.pdb # 5: usage_00449.pdb # # Length: 50 # Identity: 3/ 50 ( 6.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 50 ( 52.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 50 ( 48.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00370.pdb 1 ------VLPNLGTLTTP-------GLDIQLEVLKLLAEMSSFC------- 30 usage_00446.pdb 1 DPRAKIMQQTCHE----VLTELGIKDDPLLDLAVELEKIALSDDYFVQRK 46 usage_00447.pdb 1 DPRAKIMQQTCHE----VLTELGIKDDPLLDLAVELEKIALSDDYFVQRK 46 usage_00448.pdb 1 DPRAKIMQQTCHE----VLTELGIKDDPLLDLAVELEKIALSDDYFVQRK 46 usage_00449.pdb 1 --RAKIMQQTCHE----VLTELGIKDDPLLDLAVELEKIALSDDYFVQRK 44 mqqtche kdDplLdlaveLekialsd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################