################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:24 2021 # Report_file: c_0012_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00036.pdb # # Length: 285 # Identity: 96/285 ( 33.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 263/285 ( 92.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/285 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -GFGTALPLECPKS-KAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRRE 58 usage_00016.pdb 1 -GFGTALPLECPKS-KAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRRE 58 usage_00017.pdb 1 LGFGTALPLECPKS-KAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRRE 59 usage_00018.pdb 1 -GFGTALPLECPKS-KAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRRE 58 usage_00019.pdb 1 LGFGTALPLECPKS-KAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRRE 59 usage_00036.pdb 1 -GMGSAPDFTCK--KDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRD 57 GfGtAlpleCp kaKeltkiAIdaGfhHFDsAsvYntEdhvGEAirskIadGtVrRe usage_00002.pdb 59 DIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPG-EENFPVDEHGK 117 usage_00016.pdb 59 DIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPG-EENFPVDEHGK 117 usage_00017.pdb 60 DIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPG-EENFPVDEHGK 118 usage_00018.pdb 59 DIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPG-EENFPVDEHGK 117 usage_00019.pdb 60 DIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPG-EENFPVDEHGK 118 usage_00036.pdb 58 DLFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDV---- 113 DiFyTSKvWcTslHPeLVrasLerSLqkLQfDYvDLYLIHyPmalkPG eenfpvd usage_00002.pdb 118 LIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPY 177 usage_00016.pdb 118 LIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPY 177 usage_00017.pdb 119 LIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPY 178 usage_00018.pdb 118 LIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPY 177 usage_00019.pdb 119 LIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPY 178 usage_00036.pdb 114 ADLLPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSV--ATVLPAVNQVEMNLA 171 lifdrvDlcatWEaMEkckdaGLTKsIGVSNFnyrqLEmiLnk lkykPvcNQVEchpy usage_00002.pdb 178 LNQMKLLDFCKSKDIVLVAYGVLGTQRYG-GWVDQNSP-VLLDEPVLGSMAKKYNRTPAL 235 usage_00016.pdb 178 LNQMKLLDFCKSKDIVLVAYGVLGTQ-RYGGWVDQNSP-VLLDEPVLGSMAKKYNRTPAL 235 usage_00017.pdb 179 LNQMKLLDFCKSKDIVLVAYGVLGTQ-RYGGWVDQNSP-VLLDEPVLGSMAKKYNRTPAL 236 usage_00018.pdb 178 LNQMKLLDFCKSKDIVLVAYGVLGT-----GWVDQNSP-VLLDEPVLGSMAKKYNRTPAL 231 usage_00019.pdb 179 LNQMKLLDFCKSKDIVLVAYGVLGTQ-RYGGWVDQNSP-VLLDEPVLGSMAKKYNRTPAL 236 usage_00036.pdb 172 WQQKKLREFCNAHGIVLTAFSPVRKG-------ASRGPNEVMENDMLKEIADAHGKSVAQ 224 lnQmKLldFCkskdIVLvAygvlgt dqnsP vlldepvLgsmAkkynrtpAl usage_00002.pdb 236 IALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLD-- 278 usage_00016.pdb 236 IALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLDG- 279 usage_00017.pdb 237 IALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLDGL 281 usage_00018.pdb 232 IALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLDGL 276 usage_00019.pdb 237 IALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLD-- 279 usage_00036.pdb 225 ISLRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQI 269 IaLRyqlqrGivvlntSlkeERikeNmqvFefqLssEDmkvld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################