################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:12 2021 # Report_file: c_0777_176.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00130.pdb # 2: usage_00131.pdb # 3: usage_00719.pdb # 4: usage_00864.pdb # # Length: 68 # Identity: 5/ 68 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 68 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 68 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00130.pdb 1 GTVLITGGTGGL--GGHVARRVAEQG---SA-DRILLLS-RQGSAAP-GATELLEGIRAF 52 usage_00131.pdb 1 GTVLITGGTGGL--GGHVARRVAEQG---SA-DRILLLS-RQGSAAP-GATELLEGIRAF 52 usage_00719.pdb 1 EAIIIAR-----GVSEREIEQAAKLAREKGFEALAFLAEYERRDRQFDDIIEYFERYG-- 53 usage_00864.pdb 1 GTVLITGGMGAI--GRRLARRLAAE----GA-ERLVLTS-RRGPEAP-GAAELAEELRGH 51 gtvlItg g arr A a r L s r g ap ga El E r usage_00130.pdb 53 GATAEAVA 60 usage_00131.pdb 53 GATAEAVA 60 usage_00719.pdb 54 FKAVIVA- 60 usage_00864.pdb 52 GCEVVHAA 59 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################