################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:01:52 2021 # Report_file: c_1195_31.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00006.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00012.pdb # 5: usage_00013.pdb # 6: usage_00070.pdb # 7: usage_00090.pdb # 8: usage_00107.pdb # 9: usage_00108.pdb # 10: usage_00163.pdb # 11: usage_00201.pdb # 12: usage_00205.pdb # 13: usage_00255.pdb # 14: usage_00294.pdb # 15: usage_00295.pdb # 16: usage_00296.pdb # 17: usage_00297.pdb # 18: usage_00316.pdb # 19: usage_00317.pdb # 20: usage_00318.pdb # 21: usage_00402.pdb # 22: usage_00436.pdb # 23: usage_00437.pdb # 24: usage_00488.pdb # 25: usage_00489.pdb # 26: usage_00582.pdb # 27: usage_00594.pdb # 28: usage_00598.pdb # 29: usage_00607.pdb # # Length: 52 # Identity: 0/ 52 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 52 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 52 ( 82.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 AVYYCARRD-------D------Y-Y-------F-DFWGQGTSLTVS----- 25 usage_00009.pdb 1 AIYFCARQR-------SD----FW-D-------F-DVWGSGTQVTVS----- 27 usage_00010.pdb 1 AIYFCARQR-------SD----FW-D-------F-DVWGSGTQVTVS----- 27 usage_00012.pdb 1 -VYYCTRR-----------------D-------M-DYWGAGTTVTVS----- 21 usage_00013.pdb 1 -VYYCTRR-----------------D-------M-DYWGAGTTVTVS----- 21 usage_00070.pdb 1 -VYYCTRR-----------------D-------M-DYWGAGTTVTVS----- 21 usage_00090.pdb 1 -VYFCARENADYGSDYY------F-G-------M-DVWG------------- 23 usage_00107.pdb 1 GIYYCTGIY-------YH----YP-W-------F-AYWGQGTLVTVS----- 27 usage_00108.pdb 1 -VYYCARGR-------WY----RR-A-------L-DYWGQGTLVTVS----- 26 usage_00163.pdb 1 ATYYCARGD-------YY----GA-W-------F-AYWGQGTLVTVS----- 27 usage_00201.pdb 1 AVFYCVRWV-------YG--NFDS-A-------L-DYWGQGTSVTVS----- 29 usage_00205.pdb 1 -VYLAVMNQ-------AG--R-Y--D-------Y-SN--PATLFTLS----- 24 usage_00255.pdb 1 AVYYCVRNY-------GS--S-YG-Y-------F-DVWGAGTTVTVS----- 28 usage_00294.pdb 1 AVYYCARTY-------AG-YY-VG-Y-------F-DYWGQGTTLTVS----- 29 usage_00295.pdb 1 AVYYCARTY-------AG-YY-VG-Y-------F-DYWGQGTTLTVS----- 29 usage_00296.pdb 1 AVYYCARTY-------AG-YY-VG-Y-------F-DYWGQGTTLTVS----- 29 usage_00297.pdb 1 AVYYCARTY-------AG-YY-VG-Y-------F-DYWGQGTTLTVS----- 29 usage_00316.pdb 1 ATYFCAARY-------QG----GR-A---------LIFGTGTTVSVS----- 26 usage_00317.pdb 1 AVYYCARQN-------KK----LT-W-------F-DYWGQGTLVTVS----- 27 usage_00318.pdb 1 --YYCAARA-------PV-------D-------Y-DYWGQGTQVTVS----- 23 usage_00402.pdb 1 AVYYCSRGG-------A------G-I-------M-AYWGQGTSVTVS----- 25 usage_00436.pdb 1 AIYYCARDW-------ER----GD-F-------F-DYWGQGTLVTVS----- 27 usage_00437.pdb 1 AVYYCASRD-------YDY-D-GR-Y-------F-DYWGQGTLVTVS----- 29 usage_00488.pdb 1 -VYYCARFA-------GG----WG-A-------Y-DVWGQGTLVTVS----- 26 usage_00489.pdb 1 -VYYCARFA-------GG----WG-A-------Y-DVWGQGTLVTVS----- 26 usage_00582.pdb 1 -TYYCARYY-------YG----YW-Y-------F-DVWGQGTTLTVS----- 26 usage_00594.pdb 1 -VYYCARGD--------------G-F-------Y-VYWGQGTTLTVS----- 23 usage_00598.pdb 1 AVYFCARD--------Y------E-G-------F-AYWG--------LVTVS 21 usage_00607.pdb 1 GTYRCGLGV-------A-----GGYCDYALCSSRYAECGDGTAVTVN----- 35 y c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################