################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:00 2021 # Report_file: c_0932_320.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00093.pdb # 2: usage_00672.pdb # 3: usage_01201.pdb # 4: usage_02009.pdb # 5: usage_02126.pdb # 6: usage_02246.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 63 ( 4.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 63 ( 65.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 ------TV-----ALRGYAFSED--GEYFAYGLSA---SGSDWVTIKFMKVDGAKELPDV 44 usage_00672.pdb 1 -------------PLMSPAWSPD--GSKLAYVTFE---SG--RSALVIQTLANGAVRQV- 39 usage_01201.pdb 1 ---------------KAISWHRR--GDHFATVSPSGQRS-----SVAIHTLSKHLTQI-- 36 usage_02009.pdb 1 AEATSGGSTVGPSDATVMDIEQDGSV--LTETSVS----G----DSVTVTY--------- 41 usage_02126.pdb 1 -------Q-----PLMSPAWSPD--GSKLAYVTFE---SG--RSALVIQTLANGAVRQV- 40 usage_02246.pdb 1 ----------------APAFSPD--GTKLAFALSK---SG--SLNLYVDLA-SGQISQV- 35 d g a usage_00093.pdb 45 LER 47 usage_00672.pdb 40 -A- 40 usage_01201.pdb --- usage_02009.pdb --- usage_02126.pdb 41 -A- 41 usage_02246.pdb 36 -T- 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################