################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:17 2021 # Report_file: c_0661_22.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00060.pdb # 2: usage_00136.pdb # 3: usage_00137.pdb # 4: usage_00138.pdb # 5: usage_00139.pdb # 6: usage_00140.pdb # 7: usage_00141.pdb # 8: usage_00512.pdb # # Length: 53 # Identity: 8/ 53 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 53 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 53 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 -ATHDDDTVDVFT-SGRKMRLTCSPNIDAASLKKGQTVRLNE-ALTVVEAGT- 49 usage_00136.pdb 1 VDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLP- 52 usage_00137.pdb 1 VDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPE 53 usage_00138.pdb 1 -DKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLP- 51 usage_00139.pdb 1 VDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPE 53 usage_00140.pdb 1 VDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLP- 52 usage_00141.pdb 1 VDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPE 53 usage_00512.pdb 1 EEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLM- 52 v V G v s fv d L pG V LN ltVv vl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################