################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:45 2021 # Report_file: c_0299_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00060.pdb # 2: usage_00146.pdb # 3: usage_00147.pdb # 4: usage_00250.pdb # 5: usage_00251.pdb # # Length: 183 # Identity: 91/183 ( 49.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/183 ( 49.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/183 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 PVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSI 60 usage_00146.pdb 1 PVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSI 60 usage_00147.pdb 1 PVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSI 60 usage_00250.pdb 1 ------VNVFGFETGNHVMHGLWARNWKDMIVQMQGLGFNAVRLPFCPATLRSDTMPASI 54 usage_00251.pdb 1 ----KGVNVFGFETGNHVMHGLWARNWKDMIVQMQGLGFNAVRLPFCPATLRSDTMPASI 56 N FGFET N V HGLW R M Q LG N RLP L TMP SI usage_00060.pdb 61 NFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWIS 120 usage_00146.pdb 61 NFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWIS 120 usage_00147.pdb 61 NFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWIS 120 usage_00250.pdb 55 DYS-RNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLA 113 usage_00251.pdb 57 DYS-RNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLA 115 N DLQGLTSLQ DK A G LD H PDC G S LWYT S EA W usage_00060.pdb 121 DLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIF 180 usage_00146.pdb 121 DLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIF 180 usage_00147.pdb 121 DLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIF 180 usage_00250.pdb 114 DLRFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIA 173 usage_00251.pdb 116 DLRFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIA 175 DL A RYK P V G DL NEPH A WG G DW AAER AVL V P LI usage_00060.pdb 181 VE- 182 usage_00146.pdb 181 VE- 182 usage_00147.pdb 181 VE- 182 usage_00250.pdb 174 VEG 176 usage_00251.pdb 176 VEG 178 VE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################