################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:29:07 2021 # Report_file: c_1159_145.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00030.pdb # 2: usage_00046.pdb # 3: usage_00101.pdb # 4: usage_00106.pdb # 5: usage_00220.pdb # 6: usage_00221.pdb # 7: usage_00222.pdb # 8: usage_00223.pdb # 9: usage_00234.pdb # 10: usage_00249.pdb # 11: usage_00250.pdb # 12: usage_00431.pdb # 13: usage_00461.pdb # 14: usage_00462.pdb # 15: usage_00692.pdb # 16: usage_00882.pdb # 17: usage_00888.pdb # 18: usage_00889.pdb # 19: usage_00992.pdb # 20: usage_01018.pdb # 21: usage_01019.pdb # 22: usage_01187.pdb # 23: usage_01246.pdb # 24: usage_01280.pdb # 25: usage_01281.pdb # 26: usage_01415.pdb # 27: usage_01590.pdb # 28: usage_01641.pdb # 29: usage_01643.pdb # 30: usage_01654.pdb # 31: usage_01837.pdb # 32: usage_01878.pdb # # Length: 28 # Identity: 5/ 28 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 28 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 28 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00046.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00101.pdb 1 RLPACVVDCGTGYTKLGYAGNTEPQFII 28 usage_00106.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00220.pdb 1 ---ALVCDNGSGLVKAGFAGDDAPRAVF 25 usage_00221.pdb 1 ---ALVCDNGSGLVKAGFAGDDAPRAVF 25 usage_00222.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_00223.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_00234.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_00249.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_00250.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_00431.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00461.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00462.pdb 1 ----LVCDNGSGLVKAGFAGDDAPRAVF 24 usage_00692.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_00882.pdb 1 DIAALVVDNGSGMCKAGFAGDDAPRAVF 28 usage_00888.pdb 1 ----LVCDNGSGLVKAGFAGDDAPRAVF 24 usage_00889.pdb 1 ----LVCDNGSGLVKAGFAGDDAPRAVF 24 usage_00992.pdb 1 ---ALVCDNGSGLVKAGFAGDDAPRAVF 25 usage_01018.pdb 1 ---ALVVDNGSGMCKAGFAGDDAPRAVF 25 usage_01019.pdb 1 ---ALVVDNGSGMCKAGFAGDDAPRAVF 25 usage_01187.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_01246.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_01280.pdb 1 ---ALVCDNGSGLVKAGFAGDDAPRAVF 25 usage_01281.pdb 1 ---ALVCDNGSGLVKAGFAGDDAPRAVF 25 usage_01415.pdb 1 ETTALVCDNGSGLVKAGFAGDDAPRAVF 28 usage_01590.pdb 1 -----VIHPGSTTLRIGRATDTLPASI- 22 usage_01641.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_01643.pdb 1 -TTALVCDNGSGLVKAGFAGDDAPRAVF 27 usage_01654.pdb 1 ETTALVCDNGSGLVKAGFAGDDAPRAVF 28 usage_01837.pdb 1 --TALVCDNGSGLVKAGFAGDDAPRAVF 26 usage_01878.pdb 1 -VQALVIDNGSGMCKAGFAGDDAPRAVF 27 V d Gsg k G Agd P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################