################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:40 2021 # Report_file: c_1208_21.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00018.pdb # 2: usage_00074.pdb # 3: usage_00087.pdb # 4: usage_00257.pdb # 5: usage_00390.pdb # 6: usage_00391.pdb # 7: usage_00849.pdb # 8: usage_01619.pdb # 9: usage_02154.pdb # 10: usage_02155.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 69 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 69 ( 62.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -----LIVASSYSKNFGLYNERVGACTLVAA-------------------DSETVDRAFS 36 usage_00074.pdb 1 ----ELIVASSYSKNFGLYNERVGACTLVAA-------------------DSETVDRAFS 37 usage_00087.pdb 1 ----EVLIAASCSKNFGIYRERTGCLLALCA-------------------DAATRELAQG 37 usage_00257.pdb 1 GII----------------FAA--N-YLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQK 41 usage_00390.pdb 1 ---KELIVASSYSKNFGLYNERVGACTLVAA-------------------DSETVDRAFS 38 usage_00391.pdb 1 ---KELIVASSYSKNFGLYNERVGACTLVAA-------------------DSETVDRAFS 38 usage_00849.pdb 1 ---KELIVASSYS-NFALYNERVGACTLVAA-------------------DSETVDRAFG 37 usage_01619.pdb 1 -----LIVASSYSANFGLYNERVGACTLVAA-------------------DSETVDRAFS 36 usage_02154.pdb 1 -----LIVASSYSHNFGLYNERVGACTLVAA-------------------DSETVDRAFS 36 usage_02155.pdb 1 -----VLIAASCSKNFGIYRERTGCLLALCA-------------------DAATRELAQG 36 er a d t a usage_00018.pdb 37 QMKAAIRAN 45 usage_00074.pdb 38 QMKAAIRAN 46 usage_00087.pdb 38 AMAFLNRQT 46 usage_00257.pdb 42 AAKIKKK-- 48 usage_00390.pdb 39 QMKAAIRVN 47 usage_00391.pdb 39 QMKAAIRVN 47 usage_00849.pdb 38 QMKAAIRDN 46 usage_01619.pdb 37 QMKAAIRAN 45 usage_02154.pdb 37 QMKAAIRAN 45 usage_02155.pdb 37 AMAFLNRQT 45 m r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################