################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:43 2021 # Report_file: c_0464_74.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00224.pdb # 2: usage_00770.pdb # 3: usage_00863.pdb # 4: usage_00986.pdb # 5: usage_00987.pdb # 6: usage_00988.pdb # 7: usage_01032.pdb # # Length: 88 # Identity: 5/ 88 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 88 ( 10.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 88 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00224.pdb 1 ------GTAYNGQDCLQMLEEK--RPDILLLDIIMPHL-DGLAVLERIRA--GFEHQPNV 49 usage_00770.pdb 1 ----QLEFVDNGAKALYQVQQA--KYDLIILDIGLPIA-NGF-EVSAVRKPGANQ-HTPI 51 usage_00863.pdb 1 ----RVEWAKTISEAENLYR--PNAFDLVVLDLRLPDG-NGFDLAEMIVK--KEK-DLPF 50 usage_00986.pdb 1 KRVLIVDDATNGREAVEKYKEL--KPDIVTMDITMP-EMNGIDAIKEIMK--IDP-NAKI 54 usage_00987.pdb 1 -----VAEAADAGEAYRLYRET--TPDIVVMDLTLPGP-GGIEATRHIRQ--WDG-AARI 49 usage_00988.pdb 1 -----VAEAADAGEAYRLYRET--TPDIVVMDLTLPGP-GGIEATRHIRQ--WDG-AARI 49 usage_01032.pdb 1 -----IGEAENGRQGYEKAMAL--RPDVILMDLVMEEM-DGIESTKAILK--DWP-KAKI 49 a D D p G i usage_00224.pdb 50 IMLTAFG-QEDVTKKAVELGASYFIL-K 75 usage_00770.pdb 52 VILTDN-VSDDRAKQC-AAGASSVVDKS 77 usage_00863.pdb 51 LFLTAQ-AGAQERLRGFELGAAEFIPKP 77 usage_00986.pdb 55 IVCSAMG-QQAMVIEAIKAGAKDFIV-N 80 usage_00987.pdb 50 LIFTMH-QGSAFALKAFEAGASGYVTKS 76 usage_00988.pdb 50 LIFTMH-QGSAFALKAFEAGASGYVTKS 76 usage_01032.pdb 50 IIVTSF-IDDEKVYPAIEAGAAGYLL-- 74 t GA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################