################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:20 2021 # Report_file: c_0392_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00106.pdb # # Length: 84 # Identity: 17/ 84 ( 20.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 84 ( 20.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 84 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 RAKIMFARHAIVRPFNGRMTLMVRAANAR-QNV-IAEARAKMRLM---------LMKIHD 49 usage_00025.pdb 1 RAKIMFARHAIVRPFNGRMTLMVRAANAR-QNV-IAEARAKMRLM---------LMKIHD 49 usage_00056.pdb 1 --GVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDL 58 usage_00057.pdb 1 --GVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSE--------RRFHDL 50 usage_00058.pdb 1 --GVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDL 58 usage_00059.pdb 1 --GVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDL 58 usage_00106.pdb 1 --GVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDL 58 F F G TLM R AN R A usage_00024.pdb 50 LKLVRNEHPI-FL-LGWNMMHVID 71 usage_00025.pdb 50 LKLVRNEHPI-FL-LGWNMMHVID 71 usage_00056.pdb 59 T---RTRSRSPIFSLSWTVMHPID 79 usage_00057.pdb 51 T---LTRSRSPIFSLSWTVMHPID 71 usage_00058.pdb 59 T---LTRSRSPIFSLSWTVMHPID 79 usage_00059.pdb 59 T---LTRSRSPIFSLSWTVMHPID 79 usage_00106.pdb 59 T---LTRSRSPIFSLSWTVMHPID 79 L W MH ID #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################