################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:37 2021 # Report_file: c_0476_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00010.pdb # 2: usage_00024.pdb # 3: usage_00043.pdb # 4: usage_00045.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00060.pdb # 8: usage_00061.pdb # 9: usage_00074.pdb # # Length: 85 # Identity: 11/ 85 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 85 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 85 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 HIVIGTPGRINDFIRE---Q-ALDVHTAHILVVDEADL-LD-G-FITDVDQIAARP---K 50 usage_00024.pdb 1 EIVVATPGRFIDILTLND-GKLLSTKRITFVVMDEADRLFDLG-FEPQITQIMKTVR--- 55 usage_00043.pdb 1 EICIATPGRLIDFLEC---G-KTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQIR--- 52 usage_00045.pdb 1 EIIVATPGRLVDCIER---R-LLVFSQCCYVIMDEADRMIDQG-FEEPLTKIL-DA---- 50 usage_00058.pdb 1 HMMVATPGRLMDLLQK---K-MVSLDICRYLALDEADRMIDMG-FEGDIRTIFSYFK--- 52 usage_00059.pdb 1 HMMVATPGRLMDLLQK---K-MVSLDICRYLALDEADRMIDMG-FEGDIRTIFSYFK--- 52 usage_00060.pdb 1 HMMVATPGRLMDLLQK---K-MVSLDICRYLALDEADRMIDMG-FEGDIRTIFSYFK--- 52 usage_00061.pdb 1 HMMVATPGRLMDLLQK---K-MVSLDICRYLALDEADRMIDMG-FEGDIRTIFSYFK--- 52 usage_00074.pdb 1 DILVTTPNRLIYLLKQD-PP-GIDLASVEWLVVDESDKLFEDGGFRDQLASIFLACTSH- 57 TPgR d DEaD d G F I usage_00010.pdb 51 --DLQLVFSATIPEKLKPFLKKY-- 71 usage_00024.pdb 56 PDKQCVLFSATFPNKLRSFAVRV-- 78 usage_00043.pdb 53 PDRQTLMWSATWPKEVRQLAEDF-- 75 usage_00045.pdb 51 L-RQTMMYTATMPPTVEKIAKKYL- 73 usage_00058.pdb 53 GQRQTLLFSATMPKKIQNFAKSA-- 75 usage_00059.pdb 53 GQRQTLLFSATMPKKIQNFAKSALV 77 usage_00060.pdb 53 GQRQTLLFSATMPKKIQNFAKSA-- 75 usage_00061.pdb 53 GQRQTLLFSATMPKKIQNFAK---- 73 usage_00074.pdb 58 K-VRRAMFSATFAYDVEQWCKL--- 78 sAT p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################