################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:25 2021 # Report_file: c_1261_74.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00642.pdb # 2: usage_00643.pdb # 3: usage_00644.pdb # 4: usage_00645.pdb # 5: usage_01253.pdb # 6: usage_01255.pdb # 7: usage_01547.pdb # 8: usage_01548.pdb # 9: usage_01549.pdb # 10: usage_03029.pdb # 11: usage_04606.pdb # 12: usage_04607.pdb # # Length: 35 # Identity: 4/ 35 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 35 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 35 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00642.pdb 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 34 usage_00643.pdb 1 ---RVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 31 usage_00644.pdb 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 34 usage_00645.pdb 1 ---RVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 31 usage_01253.pdb 1 --MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 usage_01255.pdb 1 --MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 usage_01547.pdb 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 34 usage_01548.pdb 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 34 usage_01549.pdb 1 ---RVLVCGGAGYIGSHFVRALLRDTNHSVVIVD- 31 usage_03029.pdb 1 ---RVLLAGATGLTGEHLLDRILSEPTLAKVIAP- 31 usage_04606.pdb 1 --TRVLILGVNGFIGNHLTERLLREDHYEVYGLD- 32 usage_04607.pdb 1 --TRVLILGVNGFIGNHLTERLLREDHYEVYGLD- 32 L G G iG v d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################