################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:34 2021 # Report_file: c_1477_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00166.pdb # 2: usage_00171.pdb # 3: usage_00384.pdb # 4: usage_00385.pdb # 5: usage_01131.pdb # 6: usage_01207.pdb # 7: usage_01208.pdb # 8: usage_01475.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 57 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 57 ( 63.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 HPLAQLSLRILGV------KTAQALAEIAVAVGLAQNLGAMRA--LAT--------- 40 usage_00171.pdb 1 HPLAQLSLRILGV------KTAQALAEIAVAVGLAQNLGAMRA--LAT--------- 40 usage_00384.pdb 1 HPLAQLSLRILGV------KTAQALAEIAVAVGLAQNLGAMRA--LAT--------- 40 usage_00385.pdb 1 HPLAQLSLRILGV------KTAQALAEIAVAVGLAQNLGAMRA--LAT--------- 40 usage_01131.pdb 1 ------APIRHTTMGVGAHRCVGA-GLARMEVIVFLREWLGGM-------------- 36 usage_01207.pdb 1 -PRVALSHDLLGN------PSARELAQIIVSIGLAQNFAALKA--LV---------- 38 usage_01208.pdb 1 NPRVALSHDLLGN------PSARELAQIIVSIGLAQNFAALKA--LVS--------- 40 usage_01475.pdb 1 ---------------------PETEAWVKAQNAVTQDYLAQIPYRAAIKEKLAASWN 36 a q a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################