################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:15 2021 # Report_file: c_1411_73.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00425.pdb # 2: usage_00488.pdb # 3: usage_00652.pdb # 4: usage_00653.pdb # 5: usage_00763.pdb # 6: usage_00764.pdb # 7: usage_00911.pdb # 8: usage_00912.pdb # # Length: 76 # Identity: 52/ 76 ( 68.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 76 ( 68.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 76 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00425.pdb 1 ----------------LGVQRVTRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKF 44 usage_00488.pdb 1 -------------------QRVTRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKF 41 usage_00652.pdb 1 -------------------GHVTRIENLENAKKLWDNANS-LEKGNISGYLKAANELHKF 40 usage_00653.pdb 1 ----------------------TRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKF 38 usage_00763.pdb 1 -----KALDEVAKIRELGVQRVTRIENLENAKKLWDNANS-LEKGNISGYLKAANELHKF 54 usage_00764.pdb 1 PYSDAKALDEVAKIRELGVQRVTRIENLENAKKLWDNANS-LEKGNISGYLKAANELHKF 59 usage_00911.pdb 1 ----------------------TRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKF 38 usage_00912.pdb 1 --------------------MVTRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKF 40 TRIENLENAKKLWDNANS LEKGNISGYLKAANELHKF usage_00425.pdb 45 MKEKNLKEDDLRPELS 60 usage_00488.pdb 42 MKEKNLKEDDLRPELS 57 usage_00652.pdb 41 -KEKNLKEDDLRPELS 55 usage_00653.pdb 39 MKEKNLKEDDLRPELS 54 usage_00763.pdb 55 -KEKNLKEDDLRPELS 69 usage_00764.pdb 60 -KEKNLKEDDLRPELS 74 usage_00911.pdb 39 MKEKNLKEDDLRPELS 54 usage_00912.pdb 41 MKEKNLKEDDLRPELS 56 KEKNLKEDDLRPELS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################