################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:15 2021 # Report_file: c_1479_189.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00365.pdb # 2: usage_00849.pdb # 3: usage_01389.pdb # 4: usage_01442.pdb # 5: usage_01443.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 57 ( 78.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00365.pdb 1 TLRTWM---RWN-QAKS-LDEFIAIQKEEA--------------------------- 25 usage_00849.pdb 1 ------SWDEFR-QL----KKTLKETFP---------------VEAGLLRRSDRVLP 31 usage_01389.pdb 1 ----TS---LLHE--IPECMQTCFKVWFKLMEEVNNDVVKVQG-------------- 34 usage_01442.pdb 1 ----IN---EIDR--LPDYMKISYKAILDLYKDYEKELS------------------ 30 usage_01443.pdb 1 ----IN---EIDR--LPDYMKISYKAILDLYKDYEKELS------------------ 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################