################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:23 2021 # Report_file: c_0578_16.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00009.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00072.pdb # 5: usage_00073.pdb # 6: usage_00074.pdb # 7: usage_00075.pdb # 8: usage_00102.pdb # 9: usage_00134.pdb # 10: usage_00197.pdb # 11: usage_00201.pdb # 12: usage_00220.pdb # 13: usage_00221.pdb # # Length: 83 # Identity: 7/ 83 ( 8.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 83 ( 26.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 83 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -EVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMD-EHNCLEVIVVKGEAKKI 58 usage_00015.pdb 1 ESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 59 usage_00016.pdb 1 ESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 59 usage_00072.pdb 1 ESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTAIAMD-EHNSLETIILQGNSFEI 59 usage_00073.pdb 1 ----AVLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 usage_00074.pdb 1 -SKIAVLVVIYDHHQRELNQRMIDIFHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 58 usage_00075.pdb 1 ----AVLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 usage_00102.pdb 1 EKRFYILTIVVEDR-EKAYRQVNELLHNFSEDILLRVGYPVREE-NAIIFLVLKTDNDTI 58 usage_00134.pdb 1 ----AVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 usage_00197.pdb 1 ----AVLVVIYDAHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 usage_00201.pdb 1 ----AVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 usage_00220.pdb 1 ESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 59 usage_00221.pdb 1 ----AVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMD-EHNCLETIILQGNSFEI 55 l y d H l md E N le i l g I usage_00009.pdb 59 KMIADKLLSLKGVKHGKLVMTS- 80 usage_00015.pdb 60 QRLQLEIGGLRGVKFAKLTKASS 82 usage_00016.pdb 60 QRLQLEIGGLRGVKFAKLTKAS- 81 usage_00072.pdb 60 QRLQLEIGGLRGVKFAKLTK--- 79 usage_00073.pdb 56 QRLQLEIGGLRGVKFAKLTK--- 75 usage_00074.pdb 59 QRLQLEIGGLRGVKFAKLTK--- 78 usage_00075.pdb 56 QRLQLEIGGLRGVKFAKLTKAS- 77 usage_00102.pdb 59 GALSGKLGQISGV-RVKTVP--- 77 usage_00134.pdb 56 QRLQLEIGGLRGVKFAKLTK--- 75 usage_00197.pdb 56 QRLQLEIGGLRGVKFAKLTKASS 78 usage_00201.pdb 56 QRLQLEIGGLRGVKFAKLTK--- 75 usage_00220.pdb 60 QRLQLEIGGLRGVKFAKLTK--- 79 usage_00221.pdb 56 QRLQLEIGGLRGVKFAKLTKASS 78 l g l GV Kl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################