################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:32 2021 # Report_file: c_1479_20.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01086.pdb # 2: usage_01087.pdb # 3: usage_01088.pdb # 4: usage_01089.pdb # 5: usage_01539.pdb # 6: usage_01808.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 43 ( 11.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 43 ( 46.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01086.pdb 1 QEELVEDLITIVSHFAGKLYGH----SHKYKKLTKTVKEIV-- 37 usage_01087.pdb 1 QEELVEDLITIVSHFAGKLYGH----SHKYKKLTKTVKEIV-- 37 usage_01088.pdb 1 QEELVEDLITIVSHFAGKLYGH----SHKYKKLTKTVKEIVR- 38 usage_01089.pdb 1 QEELVEDLITIVSHFAGKLYGH----SHKYKKLTKTVKEIVRE 39 usage_01539.pdb 1 -EENIQEKIAFIFNNLS-----QSN-MTQKVEELKE------- 29 usage_01808.pdb 1 ----REALQKDLDDNLF-----G--QHLAKKIILNAVFGFINN 32 e li k k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################