################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:23:43 2021 # Report_file: c_1281_70.html ################################################################################################ #==================================== # Aligned_structures: 58 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00026.pdb # 7: usage_00053.pdb # 8: usage_00064.pdb # 9: usage_00065.pdb # 10: usage_00084.pdb # 11: usage_00085.pdb # 12: usage_00188.pdb # 13: usage_00189.pdb # 14: usage_00190.pdb # 15: usage_00191.pdb # 16: usage_00192.pdb # 17: usage_00193.pdb # 18: usage_00232.pdb # 19: usage_00233.pdb # 20: usage_00313.pdb # 21: usage_00314.pdb # 22: usage_00315.pdb # 23: usage_00316.pdb # 24: usage_00324.pdb # 25: usage_00334.pdb # 26: usage_00335.pdb # 27: usage_00345.pdb # 28: usage_00346.pdb # 29: usage_00350.pdb # 30: usage_00351.pdb # 31: usage_00357.pdb # 32: usage_00358.pdb # 33: usage_00368.pdb # 34: usage_00369.pdb # 35: usage_00578.pdb # 36: usage_00609.pdb # 37: usage_00722.pdb # 38: usage_00727.pdb # 39: usage_00728.pdb # 40: usage_00853.pdb # 41: usage_00854.pdb # 42: usage_00899.pdb # 43: usage_00900.pdb # 44: usage_00901.pdb # 45: usage_00902.pdb # 46: usage_00903.pdb # 47: usage_00904.pdb # 48: usage_00905.pdb # 49: usage_00906.pdb # 50: usage_00907.pdb # 51: usage_00908.pdb # 52: usage_00909.pdb # 53: usage_00971.pdb # 54: usage_00972.pdb # 55: usage_00973.pdb # 56: usage_00974.pdb # 57: usage_01041.pdb # 58: usage_01042.pdb # # Length: 52 # Identity: 3/ 52 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 52 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 52 ( 38.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAF- 44 usage_00013.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00018.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00019.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00020.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00026.pdb 1 --EVAEISYAKFRELSQQ-----DSEILYTLGSQMADRLRKTTRKVGDLA-- 43 usage_00053.pdb 1 -SKILSIPKEVFLDLLMK-----DRELLLFFLKDVSEHFRVVSEKLFFLT-- 44 usage_00064.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAFL 45 usage_00065.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00084.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSE-------- 37 usage_00085.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEK------- 38 usage_00188.pdb 1 -CEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSE-------- 38 usage_00189.pdb 1 ---VAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVT---------- 34 usage_00190.pdb 1 -CEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEK------- 39 usage_00191.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEK------- 38 usage_00192.pdb 1 ---VAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEK------- 37 usage_00193.pdb 1 -CEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSE-------- 38 usage_00232.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00233.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAF- 44 usage_00313.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00314.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00315.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00316.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00324.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAF- 44 usage_00334.pdb 1 --ELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFL 50 usage_00335.pdb 1 QCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLA-- 50 usage_00345.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAFL 45 usage_00346.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAF- 44 usage_00350.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVLAEKVGNLAFL 45 usage_00351.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVLAEKVGNLAFL 45 usage_00357.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00358.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00368.pdb 1 ACEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAFL 47 usage_00369.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAFL 45 usage_00578.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00609.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00722.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00727.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00728.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00853.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00854.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00899.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00900.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00901.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00902.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00903.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00904.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00905.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00906.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00907.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLA-- 43 usage_00908.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKLGNLAFL 45 usage_00909.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKLGN---- 41 usage_00971.pdb 1 --EVAEISYKKFRQLIQV-----NPDILR-LSA-QARRLQVT---------- 33 usage_00972.pdb 1 --EVAEISYKKFRQLIQV-----NPDILR-LSA-QARRLQVTSE-------- 35 usage_00973.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKV------ 39 usage_00974.pdb 1 --EVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKV------ 39 usage_01041.pdb 1 ACEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNLAFL 47 usage_01042.pdb 1 ACEVAEISYKKFRQLIQV-----NPDILMRLSAQMARRLQVTSEKVGNL--- 44 aeIsy L q iL rl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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