################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:35 2021 # Report_file: c_0035_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # # Length: 224 # Identity: 88/224 ( 39.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/224 ( 44.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/224 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 GEGDLRDFDRRVRQ-EVGEAAYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITEN 59 usage_00002.pdb 1 SKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITEN 60 usage_00003.pdb 1 SKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITEN 60 usage_00004.pdb 1 SKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITEN 60 usage_00005.pdb 1 -REELDAFDARVRK-EVAHPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITEN 58 usage_00006.pdb 1 SREELDAFDARVRK-EVAHPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITEN 59 usage_00007.pdb 1 -EDDLRKFDQRIRE-QIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITEN 58 usage_00008.pdb 1 --DDLRKFDQRIRE-QIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITEN 57 usage_00009.pdb 1 -EDDLRKFDQRIRE-QIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITEN 58 FD R R Y CELkIDGL Sl Y G V G TRGDG GE ITEN usage_00001.pdb 60 LKTIRSLPLRLKEPVSLEARGEAFMPKASFLRLNEERKAR--ELFANPRNAAAGSLRQLD 117 usage_00002.pdb 61 LRTVRSVPMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLD 120 usage_00003.pdb 61 LRTVRSVPMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLD 120 usage_00004.pdb 61 LRTVRSVPMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLD 120 usage_00005.pdb 59 LKRVKDIPLTLPEELDITVRGECYMPRASFDQVNQARQENGEPEFANPRNAAAGTLRQLD 118 usage_00006.pdb 60 LKRVKDIPLTLPEELDITVRGECYMPRASFDQVNQARQENGEPEFANPRNAAAGTLRQLD 119 usage_00007.pdb 59 LKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLD 118 usage_00008.pdb 58 LKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKN-EQLFANPRNAAAGSLRQLD 116 usage_00009.pdb 59 LKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLD 118 L P E vRGE yMP SF N n FANPRNAAAG LRQLD usage_00001.pdb 118 PKVAASRQLDLFVYGLADAEALGIASHSEALDYLQALGFKVNPERRRCANIDEVIAFVSE 177 usage_00002.pdb 121 TKIVAKRNLNTFLYTVADFGPMKAKTQFEALEELSAIGFRTNPERQLCQSIDEVWAYIEE 180 usage_00003.pdb 121 TKIVAKRNLNTFLYTVADFGPMKAKTQFEALEELSAIGFRTNPERQLCQSIDEVWAYIEE 180 usage_00004.pdb 121 TKIVAKRNLNTFLYTVADFGPMKAKTQFEALEELSAIGFRTNPERQLCQSIDEVWAYIEE 180 usage_00005.pdb 119 TAVVAKRNLATFLYQEASP--STRDSQEKGLKYLEQLGFVVNPKRILAENIDEIWNFIQE 176 usage_00006.pdb 120 TAVVAKRNLATFLYQEASP--STRDSQEKGLKYLEQLGFVVNPKRILAENIDEIWNFIQE 177 usage_00007.pdb 119 SKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEK 178 usage_00008.pdb 117 SKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEK 176 usage_00009.pdb 119 SKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEK 178 AkR L F Y q L L GF N R ID i usage_00001.pdb 178 WHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYK-- 219 usage_00002.pdb 181 YHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYK-- 222 usage_00003.pdb 181 YHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP 224 usage_00004.pdb 181 YHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP 224 usage_00005.pdb 177 VGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYK-- 218 usage_00006.pdb 178 VGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP 221 usage_00007.pdb 179 WTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYK-- 220 usage_00008.pdb 177 WTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYK-- 218 usage_00009.pdb 179 WTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYK-- 220 R LPY IDG VIKVn Q e GfT K P WA AYK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################