################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:26 2021 # Report_file: c_1442_1179.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_01370.pdb # 2: usage_04624.pdb # 3: usage_04626.pdb # 4: usage_07550.pdb # 5: usage_07551.pdb # 6: usage_08146.pdb # 7: usage_09716.pdb # 8: usage_10247.pdb # 9: usage_10248.pdb # 10: usage_19510.pdb # 11: usage_19511.pdb # 12: usage_19512.pdb # 13: usage_19962.pdb # # Length: 22 # Identity: 2/ 22 ( 9.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 22 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 22 ( 40.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01370.pdb 1 -I-QATITTDDVLVIEAP---- 16 usage_04624.pdb 1 -V-TSALSPEGVLSIQAA---- 16 usage_04626.pdb 1 -V-TSALSPEGVLSIQAAPA-- 18 usage_07550.pdb 1 ---TSSLSSDGVLTVNGPRK-- 17 usage_07551.pdb 1 ---TSSLSSDGVLTVNGP---- 15 usage_08146.pdb 1 -I-TSSLSSDGVLTVNGPRK-- 18 usage_09716.pdb 1 -I-TSSMSSDGVLTVNGPRKQ- 19 usage_10247.pdb 1 ---TSSLSSDGVLTVDGP---- 15 usage_10248.pdb 1 ---TSSLSSDGVLTVDGP---- 15 usage_19510.pdb 1 -IT--SSSSDGVLTVNGP---- 15 usage_19511.pdb 1 --T--SSSSDGVLTVNGP---- 14 usage_19512.pdb 1 --T--SSSSDGVLTVNGPR--- 15 usage_19962.pdb 1 TI-TSSLSSDGVLTVNGPRKQV 21 s gVL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################