################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:00 2021 # Report_file: c_1371_207.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00006.pdb # 2: usage_00660.pdb # 3: usage_00661.pdb # # Length: 85 # Identity: 2/ 85 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 85 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 85 ( 61.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGK--WPTLLDVAT------ACYFL 52 usage_00660.pdb 1 -------------------D-VPAMAIGSAFAFTIM-MFNVPIPGG---TTAHAIGATLL 36 usage_00661.pdb 1 ----------------DKKD-VPAMAIGSAFAFTIM-MFNVPIPGG---TTAHAIGATLL 39 d vpamaigsafaftim m vPipgg gatlL usage_00006.pdb 53 KVFYP-------------------- 57 usage_00660.pdb 37 ATTLGPWAASISLTLALFIQALLFG 61 usage_00661.pdb 40 ATTLGPWAASISLTLALFIQALLFG 64 attlg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################