################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:55 2021 # Report_file: c_1219_141.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00515.pdb # 2: usage_01022.pdb # 3: usage_01023.pdb # 4: usage_01024.pdb # 5: usage_01025.pdb # 6: usage_01043.pdb # 7: usage_01050.pdb # 8: usage_01132.pdb # 9: usage_01226.pdb # 10: usage_01227.pdb # 11: usage_01228.pdb # 12: usage_01392.pdb # 13: usage_02035.pdb # # Length: 29 # Identity: 11/ 29 ( 37.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 29 ( 58.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 29 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00515.pdb 1 -SMVEYLDGSILAQIGSPDMRTPIGHTL- 27 usage_01022.pdb 1 -SMVTFIDGSTIAQASPPDMKLPISLALG 28 usage_01023.pdb 1 -SMVTFIDGSTIAQASPPDMKLPISLALG 28 usage_01024.pdb 1 -SMVTFIDGSTIAQASPPDMKLPISLALG 28 usage_01025.pdb 1 -SMVTFIDGSTIAQASPPDMKLPISLALG 28 usage_01043.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 usage_01050.pdb 1 -SMVTFIDGSTIAQASPPDMKLPISLALG 28 usage_01132.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 usage_01226.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 usage_01227.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 usage_01228.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 usage_01392.pdb 1 -SCVEFIDKSVISQMYYPDMQIPILYSLT 28 usage_02035.pdb 1 HSMVTFIDGSTIAQASPPDMKLPISLALG 29 SmV fiDgS iaQ PDM PI L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################