################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:48 2021 # Report_file: c_0926_48.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00095.pdb # 2: usage_00229.pdb # 3: usage_00364.pdb # 4: usage_00423.pdb # # Length: 48 # Identity: 2/ 48 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 48 ( 37.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 48 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 -G-SVKLNDHFALAAMDFTNWDRT-LTAQKGWVILNDK---IVFLGSN 42 usage_00229.pdb 1 -G-SVKLNDHFALAAMDFTNWDRT-LTAQKGWVILNDK---IVFLGS- 41 usage_00364.pdb 1 --GLVRLA--KHVAVGC-------MN-DVVHAYTP-TGHKSWSLYLP- 34 usage_00423.pdb 1 VG-TSKLDDANATATMDFTNWNQT-LTAHKSWFMLKDK---IAFLG-- 41 vkL a A md l a k w l dk i flg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################