################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:41:00 2021 # Report_file: c_1034_10.html ################################################################################################ #==================================== # Aligned_structures: 48 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00009.pdb # 8: usage_00010.pdb # 9: usage_00011.pdb # 10: usage_00015.pdb # 11: usage_00016.pdb # 12: usage_00017.pdb # 13: usage_00018.pdb # 14: usage_00021.pdb # 15: usage_00022.pdb # 16: usage_00023.pdb # 17: usage_00026.pdb # 18: usage_00027.pdb # 19: usage_00028.pdb # 20: usage_00029.pdb # 21: usage_00030.pdb # 22: usage_00031.pdb # 23: usage_00032.pdb # 24: usage_00049.pdb # 25: usage_00050.pdb # 26: usage_00051.pdb # 27: usage_00054.pdb # 28: usage_00055.pdb # 29: usage_00056.pdb # 30: usage_00063.pdb # 31: usage_00064.pdb # 32: usage_00065.pdb # 33: usage_00066.pdb # 34: usage_00079.pdb # 35: usage_00080.pdb # 36: usage_00090.pdb # 37: usage_00091.pdb # 38: usage_00092.pdb # 39: usage_00093.pdb # 40: usage_00094.pdb # 41: usage_00095.pdb # 42: usage_00097.pdb # 43: usage_00098.pdb # 44: usage_00106.pdb # 45: usage_00107.pdb # 46: usage_00108.pdb # 47: usage_00109.pdb # 48: usage_00110.pdb # # Length: 55 # Identity: 25/ 55 ( 45.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 55 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 55 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00004.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00005.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE 55 usage_00006.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00007.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00008.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00009.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00010.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00011.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00015.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00016.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFS-- 53 usage_00017.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00018.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00021.pdb 1 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLY----- 50 usage_00022.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00023.pdb 1 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLY----- 50 usage_00026.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE 55 usage_00027.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS- 54 usage_00028.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00029.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS- 54 usage_00030.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00031.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00032.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00049.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00050.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00051.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00054.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00055.pdb 1 RHVAIIMAGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00056.pdb 1 RHVAIIMAGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00063.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00064.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00065.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00066.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00079.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS- 54 usage_00080.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00090.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00091.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00092.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE 55 usage_00093.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00094.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 usage_00095.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00097.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE 55 usage_00098.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00106.pdb 1 RHVAI-IDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 50 usage_00107.pdb 1 RHVAI-IDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 49 usage_00108.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYA---- 51 usage_00109.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS- 54 usage_00110.pdb 1 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY----- 50 H AI GNGRWAK K RA GHK G K AN E LTLY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################