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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:26:59 2021
# Report_file: c_1276_50.html
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#====================================
# Aligned_structures: 10
#   1: usage_00561.pdb
#   2: usage_00562.pdb
#   3: usage_00808.pdb
#   4: usage_00809.pdb
#   5: usage_00814.pdb
#   6: usage_00815.pdb
#   7: usage_00843.pdb
#   8: usage_01074.pdb
#   9: usage_01075.pdb
#  10: usage_01424.pdb
#
# Length:         52
# Identity:        1/ 52 (  1.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/ 52 ( 36.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/ 52 ( 51.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00561.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYTN   42
usage_00562.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYTN   42
usage_00808.pdb         1  NIVPLNEEIAIKAAQIE--------ADLR-----KGPDIEDVLTAATAIYTK   39
usage_00809.pdb         1  NIVPLNEEIAIKAAQIE--------ADLR-----KGPDIEDVLTAATAIY--   37
usage_00814.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYT-   41
usage_00815.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYTN   42
usage_00843.pdb         1  ELV----DFLSLKNTMIELEKSGKD-----------T-NLNDVLYAIDN---   33
usage_01074.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYT-   41
usage_01075.pdb         1  NIVPLLDDIAIKAAQIE--------ANL--------LDMEDIITATTAIYTN   36
usage_01424.pdb         1  NIVPLLDDIAIKAAQIE--------ANLIKKEIT--LDMEDIITATTAIYT-   41
                           niV     iaikaaqie                      ed  ta tai   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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