################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:53 2021 # Report_file: c_1411_141.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00173.pdb # 2: usage_00779.pdb # 3: usage_00780.pdb # 4: usage_00953.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 43 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 43 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00173.pdb 1 -TVYDIA----LEDEERDEILTLT--DSQLAQVAAFVNNY--- 33 usage_00779.pdb 1 -VYAAFEDAAKDGIDVLKGH--VP--DEWLPVLKEIIDNY--- 35 usage_00780.pdb 1 --YAAFEDAAKDGIDVLKGH--VP--DEWLPVLKEIIDNY--- 34 usage_00953.pdb 1 DPITAIEKAVKEGEKILIDA--GVPEIWVKPLLEEASKHAEER 41 a e g l d lp l e ny #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################