################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:50 2021 # Report_file: c_0464_152.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00071.pdb # 2: usage_00201.pdb # 3: usage_00306.pdb # 4: usage_00317.pdb # 5: usage_00688.pdb # 6: usage_00975.pdb # 7: usage_01171.pdb # # Length: 170 # Identity: 6/170 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/170 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 73/170 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 --ITVQADLSNVATAPAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF------YPTP- 51 usage_00201.pdb 1 EVLGFAPDLT----------SRDAV-AAVGQVAQKYGRLDV-INNAGIT------SNNVF 42 usage_00306.pdb 1 EAIAVKGDVT----------VESDVINLVQSAIKEFGKLDVMINNAGLA------NPVSS 44 usage_00317.pdb 1 EAIAVKGDVT----------VESDVINLVQSAIKEFGKLDVMINNAGLE------NPVSS 44 usage_00688.pdb 1 --LAVKCDIT----------DTEQVEQAYKEIEETHGPVEVLIANAG-VT-KDQL--MSE 44 usage_00975.pdb 1 HSKAYKCNIS----------DPKSVEETISQQEKDFGTIDVFVANAG---VTWTQEIDV- 46 usage_01171.pdb 1 DHHALRADLA----------DPKQIAELFQEVGRRFGTLDVVVNNAGVI------SHVPY 44 d G dV NAg usage_00071.pdb 52 ---LLRGDREAM-ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 107 usage_00201.pdb 43 SRV--------S-EEEFKHI-DINVTGVFNGAWCAYQCK-DA------KKGVIINTASVT 85 usage_00306.pdb 45 HEM--------S-LSDWNKVIDTNLTGAFLGSREAIKYFVEND-----IKGTVINMSSVH 90 usage_00317.pdb 45 HEM--------S-LSDWNKVIDTNLTGAFLGSREAIKYFVEND-----IKGTVINMSSVH 90 usage_00688.pdb 45 EDF--------TSVV------ETNLTGTFRVVKRANRAMLRA------KKGRVVLISSV- 83 usage_00975.pdb 47 ---D-------N-YDSWNKIISVDLNGVYYCSHNIGKIFKKN------GKGSLIITSSIS 89 usage_01171.pdb 45 AEL--------P-VAEWQRIVDVNLTGAHLVIQHAIPLLG--------DKGSVISIGSKS 87 n g kg i s usage_00071.pdb 108 ---TNQPL--LG--YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 150 usage_00201.pdb 86 GIF---------------PASKASVIGLTHGLGREIIRKNIRVVGVAPG- 119 usage_00306.pdb 91 ---EKIPW--PL--FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG- 132 usage_00317.pdb 91 ---EKIPW--PL--FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG- 132 usage_00688.pdb 84 V---GL-LG--SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGF 127 usage_00975.pdb 90 ---GK----IVQ-LQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPG-- 129 usage_01171.pdb 88 ---SEVGI--PL--RAHYTATKHALRGLTRSLAKEYGRSGLRFNVLALG- 129 K la E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################