################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:58 2021 # Report_file: c_1227_62.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00991.pdb # 2: usage_00992.pdb # 3: usage_00993.pdb # 4: usage_00994.pdb # 5: usage_01016.pdb # 6: usage_01017.pdb # 7: usage_01018.pdb # 8: usage_01095.pdb # 9: usage_02121.pdb # 10: usage_02516.pdb # 11: usage_02517.pdb # 12: usage_02518.pdb # 13: usage_02519.pdb # 14: usage_02520.pdb # 15: usage_02521.pdb # # Length: 60 # Identity: 1/ 60 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 60 ( 5.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 60 ( 83.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00991.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_00992.pdb 1 -----------VGIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 41 usage_00993.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAF- 39 usage_00994.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_01016.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_01017.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_01018.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAF- 39 usage_01095.pdb 1 DITPAKNSGSL-VRVTSSATAGTEVSGTVLFNVRNATELP-------------------- 39 usage_02121.pdb 1 --------------AKVNI----G--AAEL-----------KGMALATIVGIGLSLIFKL 29 usage_02516.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAF- 39 usage_02517.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_02518.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_02519.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_02520.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 usage_02521.pdb 1 ------------GIKSTYL----DSGYAELSGTAMA----APHVAGALALIINLAEDAFK 40 aeL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################