################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:03 2021 # Report_file: c_0322_10.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00052.pdb # 4: usage_00056.pdb # 5: usage_00064.pdb # 6: usage_00070.pdb # 7: usage_00075.pdb # 8: usage_00076.pdb # 9: usage_00078.pdb # 10: usage_00088.pdb # 11: usage_00101.pdb # 12: usage_00178.pdb # 13: usage_00182.pdb # 14: usage_00184.pdb # # Length: 150 # Identity: 111/150 ( 74.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/150 ( 74.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/150 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -CEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 59 usage_00002.pdb 1 PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDL 60 usage_00052.pdb 1 --EDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDL 58 usage_00056.pdb 1 ----QIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 56 usage_00064.pdb 1 PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDL 60 usage_00070.pdb 1 ---DQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 57 usage_00075.pdb 1 -CEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 59 usage_00076.pdb 1 ---DQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 57 usage_00078.pdb 1 ---DQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 57 usage_00088.pdb 1 -CEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVTRGQLKNGGLGVVSDAIFDL 59 usage_00101.pdb 1 --EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 58 usage_00178.pdb 1 -CEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDL 59 usage_00182.pdb 1 ---DQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFEL 57 usage_00184.pdb 1 -CEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDL 59 QIILLKGCCMEIMSLRAAVRYDPES TLTL GEMAV R QLKNGGLGVVSDAIF L usage_00001.pdb 60 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 119 usage_00002.pdb 61 GMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH 120 usage_00052.pdb 59 GKSLSAFNLDDTEVALLQAVLLMSSDRTGLICVDKIEKCQETYLLAFEHYINYRKHNIPH 118 usage_00056.pdb 57 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 115 usage_00064.pdb 61 GMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH 120 usage_00070.pdb 58 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 116 usage_00075.pdb 60 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 118 usage_00076.pdb 58 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 116 usage_00078.pdb 58 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 116 usage_00088.pdb 60 GMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH 119 usage_00101.pdb 59 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 117 usage_00178.pdb 60 GMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH 119 usage_00182.pdb 58 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLL-VDKIEKSQEAYLLAFEHYVNHRKHNIPH 116 usage_00184.pdb 60 GMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH 119 G SLS FNLDDTEVALLQAVLLMS DR GL V IEK Q LLAFEHY N RKH H usage_00001.pdb 120 FWPKLLMKVTDLRMIGACHASRFLHMKVE- 148 usage_00002.pdb 121 FWPKLLMKVTDLRMIGACHASRFLHMKVE- 149 usage_00052.pdb 119 FWPKLLMKVTDLRMIGACHASRFLHMKVEC 148 usage_00056.pdb 116 FWPKLLMKVTDLRMIGAHASRFLHMKVE-- 143 usage_00064.pdb 121 FWPKLLMKVTDLRMIGACHASRFLHMKVE- 149 usage_00070.pdb 117 FWPKLLMKVTDLRMIGAHASRFLH------ 140 usage_00075.pdb 119 FWPKLLMKVTDLRMIGA------------- 135 usage_00076.pdb 117 FWPKLLMKVTDLRMIGAHASRFLH------ 140 usage_00078.pdb 117 FWPKLLMKVTDLRMIGAHASRFLHMKVE-- 144 usage_00088.pdb 120 FWPKLLMKVTDLRMIGACHASRFLHMKVE- 148 usage_00101.pdb 118 FWPKLLMKVTDLRMIGAHASRFLHMKVE-- 145 usage_00178.pdb 120 FWPKLLMKVTDLRMIGACHASRFLHMKVEC 149 usage_00182.pdb 117 FWPKLLMKVTDLRMIGAHASRFLHMKVE-- 144 usage_00184.pdb 120 FWPKLLMKVTDLRMIGACHASRFLHMKVE- 148 FWPKLLMKVTDLRMIGA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################