################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:44 2021 # Report_file: c_1059_4.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00007.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00068.pdb # 12: usage_00116.pdb # 13: usage_00122.pdb # 14: usage_00155.pdb # 15: usage_00196.pdb # 16: usage_00198.pdb # 17: usage_00199.pdb # # Length: 31 # Identity: 11/ 31 ( 35.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 31 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 31 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -PEDFATYYCQQISGNPWTFGQGTKVEI--- 27 usage_00016.pdb 1 QPEDFATYYCHQSKEAPYAFGQGTKVEIKRT 31 usage_00017.pdb 1 -PEDFATYYCQQSYSTPNTFGQGTKVEI--- 27 usage_00061.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEIKRT 30 usage_00062.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEIKRT 30 usage_00063.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEIKRT 30 usage_00064.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEIKRT 30 usage_00065.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEI--- 27 usage_00066.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEIKRT 30 usage_00067.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEI--- 27 usage_00068.pdb 1 -PEDFATYYCQHSWGIPRTFGQGTKVEI--- 27 usage_00116.pdb 1 -PEDSAVYFCQQYYRSPLTFGGGTKVEIKRT 30 usage_00122.pdb 1 QPEDFGSYYCQHHYGTPYTFGGGTKLEIKRA 31 usage_00155.pdb 1 QPEDAAVYYCQHYYTTHRTFGQGTRVEIRRT 31 usage_00196.pdb 1 -PEDFATYYCQQS----RTFGQGTKVEI--- 23 usage_00198.pdb 1 -PEDFATYYCQQS----RTFGQGTKVEI--- 23 usage_00199.pdb 1 -PEDFATYYCQQS----RTFGQGTKVEI--- 23 PED a YyCq tFG GTkvEI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################