################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:28 2021 # Report_file: c_0331_2.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00067.pdb # 2: usage_00111.pdb # 3: usage_00120.pdb # 4: usage_00131.pdb # 5: usage_00132.pdb # 6: usage_00133.pdb # 7: usage_00134.pdb # 8: usage_00266.pdb # 9: usage_00273.pdb # 10: usage_00274.pdb # 11: usage_00276.pdb # 12: usage_00284.pdb # 13: usage_00296.pdb # 14: usage_00297.pdb # 15: usage_00337.pdb # 16: usage_00338.pdb # # Length: 140 # Identity: 78/140 ( 55.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/140 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/140 ( 2.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 59 usage_00111.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAH 60 usage_00120.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 59 usage_00131.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 60 usage_00132.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 60 usage_00133.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 59 usage_00134.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAH 59 usage_00266.pdb 1 -DFERATIKDIFSKLEYDVVGPATLARCLVVYPWTQRYFGKFGNLYNAAAIAQNAMVSKH 59 usage_00273.pdb 1 TDFERATIADIFSKLDYEAVGGATLARCLIVYPWTQRYFGNFGNLYNAAAIMGNPMIAKH 60 usage_00274.pdb 1 TDFERATIADIFSKLDYEAVGGATLARCLIVYPWTQRYFGNFGNLYNAAAIMGNPMIAKH 60 usage_00276.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAH 60 usage_00284.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAH 60 usage_00296.pdb 1 TDQERATISSIFGSLDYDDIGPKALSRCLIVYPWTQRHFGSFGNLYNAEAIIGNQKVAAH 60 usage_00297.pdb 1 --QERATISSIFGSLDYDDIGPKALSRCLIVYPWTQRHFGSFGNLYNAEAIIGNQKVAAH 58 usage_00337.pdb 1 -DKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAH 59 usage_00338.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAH 60 ER I IF dY G L RCL VYPWTQR F FGNLYNA I N a H usage_00067.pdb 60 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00111.pdb 61 GIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 usage_00120.pdb 60 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00131.pdb 61 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 usage_00132.pdb 61 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 usage_00133.pdb 60 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00134.pdb 60 GIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00266.pdb 60 GTTILNGLDRAVKNMDDITNTYAELSVLHSEKLHVDPDNFKLLADCLTIVVAARFGSAFT 119 usage_00273.pdb 61 GTTILHGLDRAVKNMDNIKATYAELSVLHSEKLHVDPDNFKLLSDCLTIVVAAQLGKAFS 120 usage_00274.pdb 61 GTTILHGLDRAVKNMDNIKATYAELSVLHSEKLHVDPDNFKLLSDCLTIVVAAQLGKAFS 120 usage_00276.pdb 61 GIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 usage_00284.pdb 61 GIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 usage_00296.pdb 61 GIKVLHGLDRAVKNMDNIKEIYAELSILHSEKLHVDPDNFKLLADCLTIVVAAKMGSGFN 120 usage_00297.pdb 59 GIKVLHGLDRAVKNMDNIKEIYAELSILHSEKLHVDPDNFKLLADCLTIVVAAKMGSGFN 118 usage_00337.pdb 60 GIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 119 usage_00338.pdb 61 GIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFT 120 G LhGLDR KNMDnI Y LS LHSEKLHVDPDNFKLL DC TIV AA G F usage_00067.pdb 120 AETQGAFQKFLAVVVSALGK 139 usage_00111.pdb 121 AETQGAFQKFLAAVVSALG- 139 usage_00120.pdb 120 AETQGAFQKFLAVVVSALGK 139 usage_00131.pdb 121 AETQGAFQKFLAVVVSALGK 140 usage_00132.pdb 121 AETQGAFQKFLAVVVSALG- 139 usage_00133.pdb 120 AETQGAFQKFLAVVVSALGK 139 usage_00134.pdb 120 AETQGAFQKFLAVVVSALGK 139 usage_00266.pdb 120 GEVQAAFQKFMAVVVSSLG- 138 usage_00273.pdb 121 GEVQAAFQKFLSVVVSALG- 139 usage_00274.pdb 121 GEVQAAFQKFLSVVVSALG- 139 usage_00276.pdb 121 AETQGAFQKFLAAVVSALG- 139 usage_00284.pdb 121 AETQGAFQKFLAAVVSALGK 140 usage_00296.pdb 121 PGTQATFQKFLAVVVSALG- 139 usage_00297.pdb 119 PGTQATFQKFLAVVVSALG- 137 usage_00337.pdb 120 AETQGAFQKFLAAVVSALGK 139 usage_00338.pdb 121 AETQGAFQKFLAAVVSALGK 140 Q FQKFl VVSaLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################