################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:47:32 2021 # Report_file: c_1172_219.html ################################################################################################ #==================================== # Aligned_structures: 78 # 1: usage_00183.pdb # 2: usage_00184.pdb # 3: usage_00299.pdb # 4: usage_00318.pdb # 5: usage_00344.pdb # 6: usage_00372.pdb # 7: usage_00377.pdb # 8: usage_00449.pdb # 9: usage_00452.pdb # 10: usage_00453.pdb # 11: usage_00467.pdb # 12: usage_00468.pdb # 13: usage_00498.pdb # 14: usage_00499.pdb # 15: usage_00514.pdb # 16: usage_00530.pdb # 17: usage_00649.pdb # 18: usage_00668.pdb # 19: usage_00814.pdb # 20: usage_00815.pdb # 21: usage_01099.pdb # 22: usage_01352.pdb # 23: usage_01468.pdb # 24: usage_01469.pdb # 25: usage_01536.pdb # 26: usage_01537.pdb # 27: usage_01538.pdb # 28: usage_01539.pdb # 29: usage_01543.pdb # 30: usage_01544.pdb # 31: usage_01545.pdb # 32: usage_01546.pdb # 33: usage_01617.pdb # 34: usage_01689.pdb # 35: usage_01745.pdb # 36: usage_01794.pdb # 37: usage_01874.pdb # 38: usage_01953.pdb # 39: usage_01954.pdb # 40: usage_02032.pdb # 41: usage_02081.pdb # 42: usage_02082.pdb # 43: usage_02179.pdb # 44: usage_02180.pdb # 45: usage_02201.pdb # 46: usage_02202.pdb # 47: usage_02410.pdb # 48: usage_02411.pdb # 49: usage_02776.pdb # 50: usage_02777.pdb # 51: usage_03053.pdb # 52: usage_03332.pdb # 53: usage_03406.pdb # 54: usage_03407.pdb # 55: usage_03455.pdb # 56: usage_03593.pdb # 57: usage_03652.pdb # 58: usage_03653.pdb # 59: usage_03654.pdb # 60: usage_03816.pdb # 61: usage_04085.pdb # 62: usage_04086.pdb # 63: usage_04325.pdb # 64: usage_04332.pdb # 65: usage_04333.pdb # 66: usage_04604.pdb # 67: usage_04760.pdb # 68: usage_04782.pdb # 69: usage_04862.pdb # 70: usage_04863.pdb # 71: usage_05117.pdb # 72: usage_05121.pdb # 73: usage_05122.pdb # 74: usage_05163.pdb # 75: usage_05164.pdb # 76: usage_05229.pdb # 77: usage_05248.pdb # 78: usage_05294.pdb # # Length: 35 # Identity: 3/ 35 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 35 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 35 ( 48.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00183.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00184.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_00299.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_00318.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00344.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00372.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00377.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00449.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00452.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00453.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00467.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00468.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00498.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00499.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00514.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_00530.pdb 1 ----IGNGAYGVVSSARRRLTGQQVAIKKI----- 26 usage_00649.pdb 1 -----G-EGTGVVYKARNKLTGEVVALKKIR---- 25 usage_00668.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_00814.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_00815.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01099.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01352.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKI----- 26 usage_01468.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_01469.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKI----- 26 usage_01536.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01537.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01538.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01539.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01543.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01544.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIRLD-- 28 usage_01545.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01546.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01617.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01689.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_01745.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01794.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01874.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01953.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01954.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_02032.pdb 1 GLEKIGEGTYGVVYKAQNNYGE-TFA--------- 25 usage_02081.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_02082.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIRLDTE 30 usage_02179.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_02180.pdb 1 -E-KIGEGTYGVVYKARNKLTGEVVALKKIR---- 29 usage_02201.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_02202.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_02410.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_02411.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_02776.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_02777.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_03053.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_03332.pdb 1 ----IGAGSYGVVIRARDTKSDN-RLVAMKR---- 26 usage_03406.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_03407.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_03455.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_03593.pdb 1 ----IGRGSYGYVYLAYDKNANKNVAIKKVNR--- 28 usage_03652.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_03653.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_03654.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_03816.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_04085.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_04086.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_04325.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_04332.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_04333.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_04604.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_04760.pdb 1 ----LGAGNGGVVTKVQHRPSGLIMARKLIH---- 27 usage_04782.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_04862.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_04863.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_05117.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKI----- 26 usage_05121.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIRLD-- 29 usage_05122.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_05163.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_05164.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_05229.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKI----- 26 usage_05248.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_05294.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR---- 27 G g GvV a a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################