################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:39 2021 # Report_file: c_0505_59.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00005.pdb # 2: usage_00219.pdb # 3: usage_00253.pdb # 4: usage_00254.pdb # # Length: 80 # Identity: 28/ 80 ( 35.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 80 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 80 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 AINEIDNTDLVFVFGYNPADSHPIVANHVINAKR-NGAKIIVCDPRKIETARIADMHIAL 59 usage_00219.pdb 1 AINEIDNTDLVFVFGYNPADSHPIVANHVINAKR-NGAKIIVCDPRKIETARIADMHIAL 59 usage_00253.pdb 1 -WVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPI 59 usage_00254.pdb 1 HWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPI 60 I N V V G N A HP AK N A IV DPR TA AD usage_00005.pdb 60 KNGSNIALLNAMGHVIIEEN 79 usage_00219.pdb 60 KNGSNIALLNAMGHVIIEEN 79 usage_00253.pdb 60 RSGTDITFLSGVLRYLIENN 79 usage_00254.pdb 61 RSGTDITFLSGVLRYLIENN 80 G I L IE N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################