################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:44 2021 # Report_file: c_1373_181.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00641.pdb # 4: usage_01429.pdb # # Length: 69 # Identity: 1/ 69 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 69 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 69 ( 53.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -----DRLSFLLAVATLN------M-----SEGELVDAFRHVSDAF-----T-IGVRANN 38 usage_00019.pdb 1 -----DRLSFLLAVATLNG-----M-----SEGELVDAFRHVSDAF--------GVRANN 37 usage_00641.pdb 1 V----DRLSFLLAVATLNGERLDGE-----SEGELVDAFRHVSDAFEQTSET-IGVRANN 50 usage_01429.pdb 1 LAHLEQVRAAAARLP----------GLDVYALHRIYRRVADVVG---ANIV-SRVKTVDR 46 drlsfllava segelvdafrhVsd gvrann usage_00018.pdb 39 AINDMVRQR 47 usage_00019.pdb 38 AINDMVRQR 46 usage_00641.pdb 51 AINDVRQR- 58 usage_01429.pdb 47 VF------- 48 ai #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################