################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:32 2021 # Report_file: c_0454_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00137.pdb # 2: usage_00138.pdb # 3: usage_00140.pdb # 4: usage_00248.pdb # 5: usage_00256.pdb # 6: usage_00257.pdb # 7: usage_00340.pdb # 8: usage_00343.pdb # # Length: 146 # Identity: 25/146 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/146 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/146 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00137.pdb 1 --DLWAYKVLLDSGSGYSDDIAAAIRHAADQAT-ATGTK-TIISMSLGSSANNSLISSAV 56 usage_00138.pdb 1 --DLWAYKVLLDSGSGYSDDIAAAIRHAADQAT-ATGTK-TIISMSLGSSANNSLISSAV 56 usage_00140.pdb 1 KADLFIIKALSGDGSGEMGWIAKAIRYAVDWR-GPKGEQMRIITMSLGGPTDSEELHDAV 59 usage_00248.pdb 1 --KLWAYKVLGDNGSGYSDDIAAAIRHVADEAS-RTGSK-VVINMSLGSSAKDSLIASAV 56 usage_00256.pdb 1 --DLWAYKVLLDSGSGYSDDIAAAIRHAADQAT-ATGTK-TIISMSLGSSANNSLISSAV 56 usage_00257.pdb 1 --DLWAYKVLLDSGSGYSDDIAAAIRHAADQAT-ATGTK-TIISMSLGSSANNSLISSAV 56 usage_00340.pdb 1 --DLWAYKVLGDDGSGYADDIAEAIRHAGDQAT-ALNTK-VVINMSLGSSGESSLITNAV 56 usage_00343.pdb 1 --ELYAVKVLGASGSGSVSSIAQGLEWAGNNG-----M--HVANLSLGSPSPSATLEQAV 51 L a KvL GSG IA air a d i mSLGs AV usage_00137.pdb 57 NYAYSKGVLIVAAAGNSGY-S--QGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRG 113 usage_00138.pdb 57 NYAYSKGVLIVAAAGNSGY-S--QGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRG 113 usage_00140.pdb 60 KYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD-----LRLSDFTNTN 114 usage_00248.pdb 57 DYAYGKGVLIVAAAGNSGS-G--SNTIGFPGGLVNAVAVAALENVQQNGTYRVADFSSRG 113 usage_00256.pdb 57 NYAYSKGVLIVAAAGNSGY-S--QGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRG 113 usage_00257.pdb 57 NYAYSKGVLIVAAAGNSGY-S--QGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRG 113 usage_00340.pdb 57 DYAYDKGVLIIAAAGNSGP-K--PGSIGYPGALVNAVAVAALENTIQNGTYRVADFSSRG 113 usage_00343.pdb 52 NSATSRGVLVVAASGNSGA----GS-ISYPARYANAMAVGATDQN-----NNRASFSQYG 101 yA gVl vaAaGNsG i yP na AV A r ad s g usage_00137.pdb 114 YISTAGDYVIQEGDIEISAP------ 133 usage_00138.pdb 114 YISTAGDYVIQEGDIEISAP------ 133 usage_00140.pdb 115 E------------EIDIVAPGVGIKS 128 usage_00248.pdb 114 NPATAGDYIIQERDIEVSAP------ 133 usage_00256.pdb 114 YISTAGDYVIQEGDIEISAP------ 133 usage_00257.pdb 114 YISTAGDYVIQEGDIEISAP------ 133 usage_00340.pdb 114 HKRTAGDYVIQKGDVEISAP------ 133 usage_00343.pdb 102 A------------GLDIVAP------ 109 i AP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################