################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:07 2021 # Report_file: c_1420_22.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00625.pdb # 2: usage_00938.pdb # 3: usage_00939.pdb # 4: usage_00940.pdb # 5: usage_00941.pdb # # Length: 76 # Identity: 34/ 76 ( 44.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 76 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 76 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00625.pdb 1 ---VIPYQWGVMNDEIDTTVPDDPAGNQLAD-SKSHAVANLKVAAGELDDEFHGMVFQDS 56 usage_00938.pdb 1 RHEVIPYQWEALNDRIPD-------------AEPSHAIENFRIAAGESDGEFYGMVFQDS 47 usage_00939.pdb 1 ----IPYQWEALNDRIPD-------------AEPSHAIENFRIAAGESDGEFYGMVFQDS 43 usage_00940.pdb 1 RHEVIPYQWEALNDRIPD-------------AEPSHAIENFRIAAGESDGEFYG-VFQDS 46 usage_00941.pdb 1 RHEVIPYQWEALNDRIPD-------------AEPSHAIENFRIAAGESDGEFYG-VFQDS 46 IPYQWealNDrIpd epSHAieNfriAAGEsDgEFyG VFQDS usage_00625.pdb 57 DVYKWLEEAAYALAYH 72 usage_00938.pdb 48 DVAKWLEAVAYLLETK 63 usage_00939.pdb 44 DVAKWLEAVAYLLETK 59 usage_00940.pdb 47 DVAKWLEAVAYLLETK 62 usage_00941.pdb 47 DVAKWLEAVAYLLETK 62 DVaKWLEavAYlLetk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################