################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:51 2021 # Report_file: c_1172_388.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00692.pdb # 2: usage_00874.pdb # 3: usage_00904.pdb # 4: usage_01453.pdb # 5: usage_02444.pdb # 6: usage_02510.pdb # 7: usage_02863.pdb # 8: usage_03129.pdb # 9: usage_04276.pdb # # Length: 27 # Identity: 3/ 27 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 27 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 27 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00692.pdb 1 IGNGSFGVVYQAKLCDSGELVAIKKVL 27 usage_00874.pdb 1 IGNGSFGVVYQAKLCDSGELVAIKKVL 27 usage_00904.pdb 1 LGRGGFGKVYKGRLADGTLVAVKRL-- 25 usage_01453.pdb 1 IGNGSFGVVYQAKLCDSGELVAIKKVL 27 usage_02444.pdb 1 IGNGSFGVVYQAKLCDSGELVAIKKVL 27 usage_02510.pdb 1 -GEGSTGIVCIATVRSSGKLVAVKKMD 26 usage_02863.pdb 1 IGNGSFGVVYQAKLCDSGELVAIKKVL 27 usage_03129.pdb 1 -ARGRFGCVWKAQL-L-NEYVAVKIFP 24 usage_04276.pdb 1 -GEGSTGIVCIATVRSSGKLVAVKKMD 26 g G G V a va k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################