################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:12 2021 # Report_file: c_1070_52.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00023.pdb # 2: usage_00117.pdb # 3: usage_00118.pdb # 4: usage_00119.pdb # 5: usage_00133.pdb # 6: usage_00134.pdb # 7: usage_00135.pdb # 8: usage_00136.pdb # 9: usage_00137.pdb # 10: usage_00239.pdb # 11: usage_00293.pdb # 12: usage_00720.pdb # 13: usage_00721.pdb # 14: usage_00839.pdb # 15: usage_00877.pdb # 16: usage_00879.pdb # 17: usage_00881.pdb # 18: usage_00882.pdb # # Length: 56 # Identity: 8/ 56 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 56 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 56 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -PELAKAVVEA-LKHNSVLLTNHGQVVCGKDFDQVYERATFFE-ACRIIVQSG--- 50 usage_00117.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI- 55 usage_00118.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00119.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI- 54 usage_00133.pdb 1 --ELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 54 usage_00134.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00135.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00136.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00137.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00239.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00293.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 56 usage_00720.pdb 1 TKELAVNAAKAMEGRRAVLLANHGILAGAQNLLNAFNIVEEVEYCAKIYCLAKNF- 55 usage_00721.pdb 1 -KELAVNAAKAMEGRRAVLLANHGILAGAQNLLNAFNIVEEVEYCAKIYCLAKNF- 54 usage_00839.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 56 usage_00877.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 56 usage_00879.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 56 usage_00881.pdb 1 -RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 55 usage_00882.pdb 1 TRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI- 55 EL a A r a LL HG a nl a evE a y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################