################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:54 2021 # Report_file: c_1121_32.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00057.pdb # 2: usage_00058.pdb # 3: usage_00225.pdb # 4: usage_00234.pdb # 5: usage_00349.pdb # 6: usage_00350.pdb # 7: usage_00377.pdb # 8: usage_00483.pdb # 9: usage_00517.pdb # # Length: 136 # Identity: 100/136 ( 73.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/136 ( 75.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/136 ( 22.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 -------KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 53 usage_00058.pdb 1 ------DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 54 usage_00225.pdb 1 ------DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 54 usage_00234.pdb 1 NLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDESLPVL 60 usage_00349.pdb 1 ------DKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 54 usage_00350.pdb 1 --------VYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 52 usage_00377.pdb 1 -------KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPAL 53 usage_00483.pdb 1 ----------------------MSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLL 38 usage_00517.pdb 1 -------KVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPAL 53 MSSKIQPAPPEEYVPMVKEVGLALRTLLATVDEtiP L usage_00057.pdb 54 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 111 usage_00058.pdb 55 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 112 usage_00225.pdb 55 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 112 usage_00234.pdb 61 PASTH--REIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 118 usage_00349.pdb 55 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 112 usage_00350.pdb 53 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 110 usage_00377.pdb 54 PAS--THREIEMAQKLLNSDLGELISKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 111 usage_00483.pdb 39 PAS--THREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 96 usage_00517.pdb 54 PAS--THREIEMAQKLLNSDLGELISKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN 111 PAS REIEMAQKLLNSDLgELI KMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKN usage_00057.pdb 112 LLDVIDQARLKMLG-- 125 usage_00058.pdb 113 LLDVIDQARLKML--- 125 usage_00225.pdb 113 LLDVIDQARLKML--- 125 usage_00234.pdb 119 LLDVIDQARLKMISQS 134 usage_00349.pdb 113 LLDVIDQARLKMLG-- 126 usage_00350.pdb 111 LLDVIDQARLKML--- 123 usage_00377.pdb 112 LLDVIDQARLKML--- 124 usage_00483.pdb 97 LLDVIDQARLKMLG-- 110 usage_00517.pdb 112 LLDVIDQARLK----- 122 LLDVIDQARLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################