################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:41 2021 # Report_file: c_0496_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00059.pdb # 8: usage_00114.pdb # 9: usage_00127.pdb # # Length: 94 # Identity: 8/ 94 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 94 ( 23.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 94 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 58 usage_00006.pdb 1 -PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 58 usage_00007.pdb 1 -PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 58 usage_00008.pdb 1 -PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 58 usage_00009.pdb 1 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 59 usage_00010.pdb 1 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 59 usage_00059.pdb 1 SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR-----HGVIYDFIMKLRRNPN 55 usage_00114.pdb 1 SSYAISKSANEDYLEYSG----LDFVTFRLANVVGPRNV-----SGPLPIFFQRLSEG-K 50 usage_00127.pdb 1 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-D 59 Ya K nE y ya Ry NV G R vip g usage_00005.pdb 59 DVYINGDGETSRDFCYIDNVIQMNILSAL----- 87 usage_00006.pdb 59 DVYINGDGETSRDFCYIDNVIQMNILSAL----- 87 usage_00007.pdb 59 DVYINGDGETSRDFCYIDNVIQMNILSALA---- 88 usage_00008.pdb 59 DVYINGDGETSRDFCYIDNVIQMNILSALA---- 88 usage_00009.pdb 60 DVYINGDGETSRDFCYIDNVIQMNILSAL----- 88 usage_00010.pdb 60 DVYINGDGETSRDFCYIDNVIQMNILSAL----- 88 usage_00059.pdb 56 VLE------QRKSYLYVRDAVEATLAAWKKFEEM 83 usage_00114.pdb 51 KCFV---TKARRDFVFVKDLARATVRAVDG---- 77 usage_00127.pdb 60 DVYINGDGETSRDFCYIDNVIQMNILSALA---- 89 rdf y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################