################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:44 2021 # Report_file: c_0051_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00074.pdb # 2: usage_00075.pdb # 3: usage_00076.pdb # 4: usage_00077.pdb # 5: usage_00078.pdb # # Length: 206 # Identity: 144/206 ( 69.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 162/206 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/206 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 DKFRTKLVWQQTGVPTPPFETVMRGDDYAARATDIVAKLGLPLFVKPAS--AVLKVKTAD 58 usage_00075.pdb 1 -KFRTKLVWQQTGVPTPPFETVMRGDDYAARATDIVAKLGLPLFVKPAS---VLKVKTAD 56 usage_00076.pdb 1 -KFRTKLVWQQLGIPTPPFEAVLRGDDYEARAKEIVAKLGLPLFVKPAS----IKVKSAD 55 usage_00077.pdb 1 DKFRTKLVWQQTGIPTPPFETVMRGDDYAARAQDIVAKLGVPLFVKPASSVAVEKVKSAD 60 usage_00078.pdb 1 DKFRTKLVWQQTGIPTPPFETVMRGDDYAARAQDIVAKLGVPLFVKPA---AVEKVKSAD 57 KFRTKLVWQQtG PTPPFEtVmRGDDYaARA dIVAKLG PLFVKPA KVK AD usage_00074.pdb 59 ALPAALSEAATHDKIVIVEKSIEGGGEYTACIAGDLDLPLIKIVP--------------- 103 usage_00075.pdb 57 ALPAALSEA--HDKIVIVEKSIEGGGEYTACIAGDLDLPLIKIVPAGEFY---------D 105 usage_00076.pdb 56 ALPAALIEAVKFDRIVVVEKSIEGGGEYTACIAGNLDLPVIRIVP--------------- 100 usage_00077.pdb 61 ALPAALEEAAKHDKIVIVEKSIEGGGEYTACIAADLDLPLIRIVP--------------- 105 usage_00078.pdb 58 ALPAALEEAAKHDKIVIVEKSIEGGGEYTACIAADLDLPLIRIVPAGEFYDYHAKYIAND 117 ALPAAL EA hDkIViVEKSIEGGGEYTACIA dLDLPlI IVP usage_00074.pdb 104 TQYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDH 163 usage_00075.pdb 106 TQYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDH 165 usage_00076.pdb 101 -QYLIPCGLTADEEARLKVLARRAFDVLGCTDWGRADFMLDADGNPYFLEVNTAPGMTDH 159 usage_00077.pdb 106 --YLIPCGLDAAKEAEFKRIARRAFDVLGCTDWGRADFMLDAAGNPYFLEVNTAPGMTDH 163 usage_00078.pdb 118 TQYLIPCGLDAAKEAEFKRIARRAFDVLGCTDWGRADFMLDAAGNPYFLEVNTAPGMTDH 177 YLIPCGL A E e KriARRAFDVLGCTDWGRADFMLDAaGN YFLEVNTAPGMTDH usage_00074.pdb 164 SLPPKAARSIGIGYSELVVKVLSL-- 187 usage_00075.pdb 166 SLPPKAARSIGIGYSELVVKVLSLTL 191 usage_00076.pdb 160 SLPPKAARAVGISYQELVVAVLA--- 182 usage_00077.pdb 164 SLPPKAARAVGIGYSELVVKVLSLTL 189 usage_00078.pdb 178 SLPPKAARAVGIGYSELVVKVLSLTL 203 SLPPKAAR GIgYsELVVkVLs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################