################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:24 2021 # Report_file: c_1399_120.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00531.pdb # 2: usage_00532.pdb # 3: usage_00533.pdb # 4: usage_00534.pdb # 5: usage_00535.pdb # 6: usage_00630.pdb # 7: usage_00631.pdb # 8: usage_00652.pdb # 9: usage_00824.pdb # 10: usage_01376.pdb # # Length: 70 # Identity: 30/ 70 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 70 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 70 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00531.pdb 1 -PADIVKNLKDNMTILEK---D-KKAE-KASEEVSKSLLSMKEILYG-T----Q-TEAVA 48 usage_00532.pdb 1 -PADIVKNLKDNMTILEK---SDKKAE-KASEEVSKSLLSMKEILYG-T---PQ-TEAVA 50 usage_00533.pdb 1 -PADIVKNLKDNMTILEK--QSDKKAE-KASEEVSKSLLSMKEILY-----EPQ-TEAVA 50 usage_00534.pdb 1 -PADIVKNLKDNMTILEK---SDKKAE-KASEEVSKSLLSMKEILYG-TN--PQ-TEAVA 51 usage_00535.pdb 1 APADIVKNLKDNMTILEK-----KKAE-KASEEVSKSLLSMKEILY------GQ-TEAVA 47 usage_00630.pdb 1 --ADIVKNLKESMAVLEK-QISDKKAE-KATEEVSKNLVAMKEILY--NEKEPQ-TEAVA 53 usage_00631.pdb 1 SPADIVKNLKESMAVLEKQDISDKKAE-KATEEVSKNLVAMKEILYG-TNKEPQ-TEAVA 57 usage_00652.pdb 1 SPADIVKNLKESA--------------VLETEEVSKNLVAK-EILY----KEPQ-TEAVA 40 usage_00824.pdb 1 ---DIVKNLKESMAVLEKQDISDKKAE-KATEEVSKNLVAMKEILYG-TNEKEPQTEAVA 55 usage_01376.pdb 1 -PADIVKNLKESMAVLEKQDISDKKAE-KATEEVSKNLVAMKEILYGTNEKEPQ-TEAVA 57 DIVKNLK m ka EEVSK L m EILY q TEAVA usage_00531.pdb 49 QLAQELYN-- 56 usage_00532.pdb 51 QLAQELYNSG 60 usage_00533.pdb 51 QLAQELYNSG 60 usage_00534.pdb 52 QLAQELYNSG 61 usage_00535.pdb 48 QLAQELYN-- 55 usage_00630.pdb 54 QLAQELYN-- 61 usage_00631.pdb 58 QLAQELYN-- 65 usage_00652.pdb 41 QLAQELYN-- 48 usage_00824.pdb 56 QLAQELYN-- 63 usage_01376.pdb 58 QLAQELYN-- 65 QLAQELYN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################