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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:01:47 2021
# Report_file: c_0545_2.html
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#====================================
# Aligned_structures: 4
#   1: usage_00389.pdb
#   2: usage_00391.pdb
#   3: usage_00393.pdb
#   4: usage_00395.pdb
#
# Length:        191
# Identity:      134/191 ( 70.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    134/191 ( 70.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           57/191 ( 29.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00389.pdb         1  TVENPFILFLYIKKFQSPLKKHIDNDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL   60
usage_00391.pdb         1  ---NPFILFLYIKKFQSPLKKHIDNDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL   57
usage_00393.pdb         1  ------------------------NDDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL   36
usage_00395.pdb         1  -------------------------DDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL   35
                                                    DDLYLKFGQNVLLKAKFPTASETNDEALEHFNVFL

usage_00389.pdb        61  QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE  120
usage_00391.pdb        58  QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE  117
usage_00393.pdb        37  QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE   96
usage_00395.pdb        36  QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE   95
                           QYYFKFTHIKKIKVNPSWYNFIISSEKTFQSIEVSKTAFLFQNLSDNSNDEIKKKTFKRE

usage_00389.pdb       121  SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNS--------------------  160
usage_00391.pdb       118  SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQN---------------------  156
usage_00393.pdb        97  SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNSSKTDSIENVFDYDNTVSTFA  156
usage_00395.pdb        96  SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQNSSKTDSIENVFDYDNTVSTFA  155
                           SILNFVNFVKYNDKYYQLHDNSHRDIISFIDAYSFILQN                     

usage_00389.pdb            -----------     
usage_00391.pdb            -----------     
usage_00393.pdb       157  TSLNSFYKEYN  167
usage_00395.pdb       156  TSLNSFYKEYN  166
                                      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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