################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:34 2021 # Report_file: c_1142_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00132.pdb # 2: usage_00249.pdb # 3: usage_00364.pdb # 4: usage_00635.pdb # 5: usage_00926.pdb # 6: usage_00927.pdb # 7: usage_00928.pdb # 8: usage_01518.pdb # # Length: 53 # Identity: 0/ 53 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 53 ( 9.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 53 ( 73.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 --SENLYF-QGSASATCERCKGGFA-----PA---EKIVNSN----GELYH-- 36 usage_00249.pdb 1 V--NVYN-----------------------EI---RTLGSGVIDQRG-YII-T 23 usage_00364.pdb 1 -VNVYNRGLN-------------------LEI---RTLGSGVIMDQRGYII-T 29 usage_00635.pdb 1 --VNVYNR-G--LNTN---------SHNQLEI---RTLGSGVIMDQRGYII-T 35 usage_00926.pdb 1 --VNVYNR-G--LNTN---------SHNQLEI---RTLGSGVIMDQRGYII-T 35 usage_00927.pdb 1 --VNVYNR-G--LNTN---------SHNQLEI---RTLGSGVIMDQRGYII-T 35 usage_00928.pdb 1 --VNVYNR-G--LNTN---------SHNQLEI---RTLGSGVIMDQRGYII-T 35 usage_01518.pdb 1 --S-INVE-G--ST------------------TKFMALGSGVIIDADKGYVVT 29 lgsgv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################