################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:21 2021 # Report_file: c_0974_132.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00357.pdb # 2: usage_00590.pdb # 3: usage_00792.pdb # 4: usage_01182.pdb # # Length: 76 # Identity: 0/ 76 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 76 ( 3.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 76 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00357.pdb 1 --NMTVHFKVLREEGPAHMKN-----FITACIVG-----SIVTEGEGN--------GKKV 40 usage_00590.pdb 1 --DCEFKRV-P----------QCPSGRVYVLKFKA---GSKRLFFWMQEPKTD---QDEE 41 usage_00792.pdb 1 D--CTFDITC---AR----------SKGGAHLIKTPNGSIVIALYDEE-----KEQDKGN 40 usage_01182.pdb 1 -YNFDVATCA---K-----------LKGGLHLVKVPGGNILVVLYDEE-----KEQDRGN 40 k usage_00357.pdb 41 SKKRAAEKMLVEL--- 53 usage_00590.pdb 42 HCRKVNECLNN----- 52 usage_00792.pdb 41 SRTSALAFAEYLHQSG 56 usage_01182.pdb 41 SKIAALTFAKELAESS 56 s a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################