################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:13 2021 # Report_file: c_0612_15.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00272.pdb # 2: usage_00347.pdb # 3: usage_00527.pdb # 4: usage_00529.pdb # 5: usage_00530.pdb # 6: usage_00531.pdb # 7: usage_00532.pdb # 8: usage_00533.pdb # 9: usage_00951.pdb # 10: usage_00952.pdb # 11: usage_01007.pdb # # Length: 93 # Identity: 88/ 93 ( 94.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/ 93 ( 94.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 93 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00272.pdb 1 ESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 60 usage_00347.pdb 1 ---WGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 57 usage_00527.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 56 usage_00529.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 56 usage_00530.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 56 usage_00531.pdb 1 -SFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 59 usage_00532.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 56 usage_00533.pdb 1 --FWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 58 usage_00951.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYALPNLTNKVTRVKVIVLH 56 usage_00952.pdb 1 ----GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYALPNLTNKVTRVKVIVLH 56 usage_01007.pdb 1 --FWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLH 58 GMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKY LPNLTNKVTRVKVIVLH usage_00272.pdb 61 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 93 usage_00347.pdb 58 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 90 usage_00527.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_00529.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_00530.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_00531.pdb 60 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 92 usage_00532.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_00533.pdb 59 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 91 usage_00951.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_00952.pdb 57 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 89 usage_01007.pdb 59 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE 91 RLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################