################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:18 2021 # Report_file: c_1445_503.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00453.pdb # 2: usage_03821.pdb # 3: usage_05818.pdb # 4: usage_11999.pdb # 5: usage_14114.pdb # 6: usage_14115.pdb # # Length: 27 # Identity: 0/ 27 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 27 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 27 ( 74.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00453.pdb 1 NVFTPQKTLE-----EFQDVYLV--M- 19 usage_03821.pdb 1 NVFTPQKSLE-----EFQDVYIV--ME 20 usage_05818.pdb 1 ----------LDSYLELWVVME----- 12 usage_11999.pdb 1 NIIQPYQDGD-----PRGYPTILIQ-- 20 usage_14114.pdb 1 NVFTPQKSLE-----EFQDVYIV--ME 20 usage_14115.pdb 1 NVFTPQKSLE-----EFQDVYIV--M- 19 e v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################