################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:47 2021 # Report_file: c_0545_99.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00098.pdb # 2: usage_00263.pdb # 3: usage_00265.pdb # 4: usage_00587.pdb # # Length: 134 # Identity: 80/134 ( 59.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/134 ( 59.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/134 ( 14.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 PSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEK 60 usage_00263.pdb 1 ---KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKK 56 usage_00265.pdb 1 ----DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKK 55 usage_00587.pdb 1 ----QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEK 56 YA LK GN FF K AIKYY A EL PVFYSN SACY S GDL K usage_00098.pdb 61 VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLS-----------PMLERN 109 usage_00263.pdb 57 VVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN 116 usage_00265.pdb 56 VVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN 115 usage_00587.pdb 57 VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLSL-N------IEPMLERN 109 V E TKALE KPD SK LLRRASANE LG F DAMFDLSVLS PMLERN usage_00098.pdb 110 LNKQAMKVLNENL- 122 usage_00263.pdb 117 LNKQAMSKLKE--- 127 usage_00265.pdb 116 LNKQAMSKLKEK-- 127 usage_00587.pdb 110 LNKQAMKVLNENLS 123 LNKQAM L E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################