################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:16 2021 # Report_file: c_0061_5.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00025.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00049.pdb # 5: usage_00060.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00070.pdb # 9: usage_00088.pdb # 10: usage_00089.pdb # 11: usage_00090.pdb # # Length: 210 # Identity: 105/210 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/210 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/210 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 -----------------FAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 43 usage_00043.pdb 1 PDMKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 60 usage_00044.pdb 1 PDMKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 60 usage_00049.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 58 usage_00060.pdb 1 -EMKIKLRMEGAVNGHKFVIEGEGIGKPYEGTQTLDLTVKEGAPLPFSYDILTPAFNRAF 59 usage_00066.pdb 1 -DMKIKLKMEGNVNGYAFVIEGEGEGKPYDGTNTINLEVKEGAPLPFSYDILTTAFNRAF 59 usage_00067.pdb 1 -----------------FVIEGEGEGKPYDGTNTINLEVKEGAPLPFSYDILTTAFNRAF 43 usage_00070.pdb 1 --MRVKVHMEGNVNGHAFVIEGEGKGKPYEGTQTLNLTVKEGAPLPFSYDILTTALNRVF 58 usage_00088.pdb 1 -----------------FVIEGEGEGKPYEGTQTMNLKVKEGAPLPFAYDILTTAFNRVF 43 usage_00089.pdb 1 PDMKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 60 usage_00090.pdb 1 --MKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFNRVF 58 F IEG G GKP G L VKEG PLPF YDILTt fNR F usage_00025.pdb 44 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 103 usage_00043.pdb 61 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 120 usage_00044.pdb 61 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 120 usage_00049.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 118 usage_00060.pdb 60 VKYPKDIPDYFKQAFPEGYSWERSMTYEDQGICIATSDITMEGDCFFYKIRFDGTNFPPN 119 usage_00066.pdb 60 TKYPDDIPNYFKQSFPEGYSWERTMTFEDKGIVKVKSDISLEEDSFIYEIYLKGENFPPN 119 usage_00067.pdb 44 TKYPDDIPNYFKQSFPEGYSWERTMTFEDKGIVKVKSDISLEEDSFIYEIYLKGENFPPN 103 usage_00070.pdb 59 TKYPEDIPDYFKQSFPEGYSWERTMTYEDKGICTIRSDISLEGDCFFQNVRFNGMNFPPN 118 usage_00088.pdb 44 TKYPKDIPDYFKQSFPEGYSWERSMTFEDGGICTATSDITLEGDCFFYEIRFDGVNFPPN 103 usage_00089.pdb 61 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 120 usage_00090.pdb 59 AKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPAN 118 KYP I YFKQsFPEGYSWER M ED GI DI l D y i G NFP N usage_00025.pdb 104 GPVMQKRTVKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 163 usage_00043.pdb 121 GPVMQKRTVKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 180 usage_00044.pdb 121 GPVMQKRTVKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 180 usage_00049.pdb 119 GPVMQKRTVKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 178 usage_00060.pdb 120 GPVMQKKTLKWEPSTEKMYVRDGVLKGDVNMALLLEGGGHYRCDFKTTYKAKKDVRLPDA 179 usage_00066.pdb 120 GPVMQKKTTGWDASTERMYVRDGVLKGDVKHKLLLEGGGYYRVDFKTIYRAKKAVKLPDY 179 usage_00067.pdb 104 GPVMQKKTTGWDASTERMYVRDGVLKGDVKHKLLLEGGGYYRVDFKTIYRAKKAVKLPDY 163 usage_00070.pdb 119 GPVMQKKTLKWEPSTEKLHVRDGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVVQLPDY 178 usage_00088.pdb 104 GPVMQKKTLKWEPSTEKMYVRDGVLMGDVNMALLLEGGGHYRCDFKTTYKAKKGVQLPDY 163 usage_00089.pdb 121 GPVMQKRTVKWEPSTENLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 180 usage_00090.pdb 119 GPVMQKRTVKWEPSTENLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDY 178 GPVMQK T W STE yVRDGvL Gdv L LEGGG Yr DFKT Y AKK V LPDy usage_00025.pdb 164 HFVDHHIEIKSHDKDYSNVNLHEHAEAHS- 192 usage_00043.pdb 181 HFVDHHIEIKSHDKDYSNVNLHEHAEAHS- 209 usage_00044.pdb 181 HFVDHHIEIKSHDKDYSNVNLHEHAEAHS- 209 usage_00049.pdb 179 HFVDHHIEIKSHDKDYSNVNLHEHAEAHS- 207 usage_00060.pdb 180 HEVDHRIEILSHDKDYNKVRLYEHAEA--- 206 usage_00066.pdb 180 HFVDHRIEILNYDKDYNKVTVYESAVA--- 206 usage_00067.pdb 164 HFVDHRIEILNYDKDYNKVTVYESAVA--- 190 usage_00070.pdb 179 HFVDHRIEILSNDSDYNKVKLYEHGVAR-- 206 usage_00088.pdb 164 HFVDHRIEILSHDKDYNNVKLYEHAVA--- 190 usage_00089.pdb 181 HFVDHHIEIKSHDKDYSNVNLHEHAEAHSE 210 usage_00090.pdb 179 HFVDHHIEIKSHDKDYSNVNLHEHAEAHS- 207 HfVDH IEI DkDY V E a A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################