################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:19 2021 # Report_file: c_0168_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00122.pdb # 2: usage_00172.pdb # 3: usage_00173.pdb # 4: usage_00174.pdb # 5: usage_00175.pdb # 6: usage_00178.pdb # 7: usage_00248.pdb # 8: usage_00249.pdb # 9: usage_00250.pdb # 10: usage_00251.pdb # 11: usage_00252.pdb # 12: usage_00253.pdb # # Length: 195 # Identity: 46/195 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 160/195 ( 82.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/195 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 DSISWDAHKWLFQTYGCAMVLVKDIRNLFHSFHVNPEYLKDLE--------DNVNTWDIG 52 usage_00172.pdb 1 DSITFNPQ-WLYVAKTCA-VLFRDAGVLERAFRIP--------A-------GFINLGEIG 43 usage_00173.pdb 1 DSITFNPQ-WLYVAKTCA-VLFRDAGVLERAFRIP--------A--------FINLGEIG 42 usage_00174.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APNMRATDGFINLGEIG 51 usage_00175.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------AP------GFINLGEIG 45 usage_00178.pdb 1 DSITFNPQ-WLYVAKTCA-VLFRDAGVLERAFRIP--------A--------FINLGEIG 42 usage_00248.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 usage_00249.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 usage_00250.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 usage_00251.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 usage_00252.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 usage_00253.pdb 1 DSITFNPQ-WLYVAKTCAMVLFRDAGVLERAFRIP--------APQMRATDGFINLGEIG 51 DSItfnpq WLyvaktCA VLfrDagvLeraFrip fiNlgeIG usage_00122.pdb 53 MELTRPARGLKLWLTLQVLGSDLIGSAIEHGFQLAVWAEEALNPKKDWEIVSPAQMAMIN 112 usage_00172.pdb 44 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 103 usage_00173.pdb 43 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 102 usage_00174.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00175.pdb 46 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 105 usage_00178.pdb 43 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 102 usage_00248.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00249.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00250.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00251.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00252.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 usage_00253.pdb 52 VQGTRHADVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTNIVC 111 vqgTRhAdvvKLWLTLQhiGqqgyarlIddGyrLAervvEgvrqrpflrlageidtnivc usage_00122.pdb 113 FRYAPKDLTKEEQDILNEKISHRILESGYAAIFTTVLNGKTVLRICAIHPEATQEDMQHT 172 usage_00172.pdb 104 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAF 163 usage_00173.pdb 103 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAF 162 usage_00174.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00175.pdb 106 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 165 usage_00178.pdb 103 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAF 162 usage_00248.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00249.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00250.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00251.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00252.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 usage_00253.pdb 112 FRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVLLNPYTTDAVIDAM 171 FRgePdwLpaErwDdwNaalqallLreGkiflslpVyrGgrwLRavllnPytTdavida usage_00122.pdb 173 IDLLDQYGREIYTEM 187 usage_00172.pdb 164 KQIDRFAG------- 171 usage_00173.pdb 163 KQIDRFAG------- 170 usage_00174.pdb 172 FKQIDRFA------- 179 usage_00175.pdb 166 FKQIDRFA------- 173 usage_00178.pdb 163 KQIDRFAGR------ 171 usage_00248.pdb 172 FKQIDRFA------- 179 usage_00249.pdb 172 FKQIDRFAG------ 180 usage_00250.pdb 172 FKQIDRFAG------ 180 usage_00251.pdb 172 FKQIDRFA------- 179 usage_00252.pdb 172 FKQIDRFA------- 179 usage_00253.pdb 172 FKQIDRFAG------ 180 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################