################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:46 2021 # Report_file: c_1380_104.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00517.pdb # 2: usage_01344.pdb # 3: usage_01345.pdb # 4: usage_01346.pdb # # Length: 62 # Identity: 19/ 62 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 62 ( 69.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 62 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00517.pdb 1 --TTAQAILWALGYEN------------PQELKEKVIKEGFKRVGIEKGGLKDKPLEALK 46 usage_01344.pdb 1 GTTTALGVLLGLGYD-AEGKVSSGSINNPHELKIKVVREGLKKAGINEKS---SVFDVLN 56 usage_01345.pdb 1 GTTTALGVLLGLGYD-AEGKV----INNPHELKIKVVREGLKKAGINEKS---SVFDVLN 52 usage_01346.pdb 1 GTTTALGVLLGLGYD-AEGKV-----NNPHELKIKVVREGLKKAGINEKS---SVFDVLN 51 TTAlgvLlgLGYd PhELKiKVvrEGlKkaGIneks svfdvLn usage_00517.pdb 47 E- 47 usage_01344.pdb 57 AV 58 usage_01345.pdb 53 A- 53 usage_01346.pdb 52 AV 53 a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################