################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:10:17 2021 # Report_file: c_0490_4.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00040.pdb # 8: usage_00041.pdb # 9: usage_00062.pdb # 10: usage_00063.pdb # 11: usage_00064.pdb # 12: usage_00065.pdb # 13: usage_00066.pdb # 14: usage_00067.pdb # 15: usage_00068.pdb # 16: usage_00069.pdb # 17: usage_00071.pdb # 18: usage_00087.pdb # 19: usage_00102.pdb # 20: usage_00103.pdb # 21: usage_00104.pdb # 22: usage_00126.pdb # 23: usage_00140.pdb # 24: usage_00141.pdb # 25: usage_00142.pdb # # Length: 85 # Identity: 17/ 85 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 85 ( 44.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 85 ( 22.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -SRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITT--QGEVVKHYKIRSLDNG- 56 usage_00014.pdb 1 -SRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITT--QGEVVKHYKIRSLDNG- 56 usage_00016.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00017.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00018.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00019.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00040.pdb 1 -SRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQN-QGEVVKHYKIRNLDNG- 57 usage_00041.pdb 1 -SRDKAEKLLLDT-GKEGAFMVRDSR-TPGTYTVSVFTKAIISENPCIKHYHIKETNDSP 57 usage_00062.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRT----- 53 usage_00063.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRT----- 53 usage_00064.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00065.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTL---- 54 usage_00066.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00067.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00068.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRT----- 53 usage_00069.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00071.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRT----- 53 usage_00087.pdb 1 -SRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQN-QGEVVKHYKIRNLDNG- 57 usage_00102.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00103.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00104.pdb 1 -SRKDAERQLLAPGNMLGSFMIRD-----GSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 52 usage_00126.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRT----- 53 usage_00140.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00141.pdb 1 -SRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPR-QGDTVKHYKIRTLDNG- 57 usage_00142.pdb 1 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDM-KGDHVKHYKIRKLDNG- 58 sRkdAErqLL n G F iR G lSv d g vKHYkIr usage_00013.pdb 57 -GYYISPRITFPTLQALVQHYSKKG 80 usage_00014.pdb 57 -GYYISPRITFPTLQALVQHYSKK- 79 usage_00016.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00017.pdb 58 -GFYISPRSTFSTLQELVDHYKK-- 79 usage_00018.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00019.pdb 58 -GFYISPRSTFSTLQELVDHYKK-- 79 usage_00040.pdb 58 -GFYISPRITFPGLHELVRHYTNA- 80 usage_00041.pdb 58 KRYYVAEKYVFDSIPLLIQYHQYN- 81 usage_00062.pdb 54 -GFYISPRSTFSTLQELVDHYKKG- 76 usage_00063.pdb 54 -GFYISPRSTFSTLQELVDHYKKG- 76 usage_00064.pdb 58 -GFYISPRSTFSTLQELVDHY---- 77 usage_00065.pdb 55 -GFYISPRSTFSTLQELVDHYKKG- 77 usage_00066.pdb 58 -GFYISPRSTFSTLQELVDHYK--- 78 usage_00067.pdb 58 -GFYISPRSTFSTLQELVDHYK--- 78 usage_00068.pdb 54 -GFYISPRSTFSTLQELVDHYKKG- 76 usage_00069.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00071.pdb 54 -GFYISPRSTFSTLQELVDHYKKG- 76 usage_00087.pdb 58 -GFYISPRITFPGLHELVRHYTNA- 80 usage_00102.pdb 58 -GFYISPRSTFSTLQELVDHYKK-- 79 usage_00103.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00104.pdb 53 -GFYISPRSTFSTLQELVDHYKKG- 75 usage_00126.pdb 54 -GFYISPRSTFSTLQELVDHYKKG- 76 usage_00140.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00141.pdb 58 -GFYISPRSTFSTLQELVDHYKKG- 80 usage_00142.pdb 59 -GYYITTRAQFETLQQLVQHYS--- 79 g Yi r F l Lv hy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################