################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:59 2021 # Report_file: c_0876_24.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00021.pdb # 2: usage_00052.pdb # 3: usage_00066.pdb # 4: usage_00157.pdb # 5: usage_00339.pdb # 6: usage_00374.pdb # # Length: 112 # Identity: 30/112 ( 26.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/112 ( 41.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/112 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 --AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY--KP 56 usage_00052.pdb 1 --AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY--KP 56 usage_00066.pdb 1 --SVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDW--KQ 56 usage_00157.pdb 1 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY--DP 58 usage_00339.pdb 1 --SVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDW--KQ 56 usage_00374.pdb 1 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP--------------NYIQ 46 vDIWS CI AEm LFPG seiDQL If lG P usage_00021.pdb 57 SFPKWARQDFSKVV-PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 107 usage_00052.pdb 57 SFPKWARQDFSKVV-PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 106 usage_00066.pdb 57 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH- 107 usage_00157.pdb 59 NFTVYEPLPWESFL-KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE- 108 usage_00339.pdb 57 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH- 107 usage_00374.pdb 47 SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA-- 95 sf v ld g LL ML Dp kRI Ak AL H F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################