################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:37 2021 # Report_file: c_0121_19.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00030.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00171.pdb # 5: usage_00172.pdb # 6: usage_00185.pdb # 7: usage_00260.pdb # 8: usage_00272.pdb # 9: usage_00286.pdb # 10: usage_00301.pdb # 11: usage_00342.pdb # 12: usage_00402.pdb # 13: usage_00406.pdb # 14: usage_00435.pdb # 15: usage_00436.pdb # 16: usage_00451.pdb # 17: usage_00499.pdb # 18: usage_00528.pdb # 19: usage_00532.pdb # # Length: 153 # Identity: 31/153 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/153 ( 32.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/153 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 ---QVESGGGLVQAGGSLRLSCAASGYAYTY---I-YGWFRQAPGKEREGVAADSG---- 49 usage_00040.pdb 1 DVQLVESGGGLVQPGGSLRLSCAASGS--I-FSIYAMGWYRQAPGKQRELVASI--SS-- 53 usage_00041.pdb 1 --QLQESGGGLVQAGGSLRLSCTASRR--T-GSNWCMGWFRQLAGKEPELVVAL--NFD- 52 usage_00171.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASGR--T-FSTYAVGWFRQAPGKEREFVGYF--GTR- 53 usage_00172.pdb 1 -VQLQESGGGLVQAGGSLRLSCAASGR--T-FSTYAVGWFRQAPGKEREFVGYF--GTR- 53 usage_00185.pdb 1 QVQLQESGGGLVQPGGSLRLSCAASGS--I-SSITTMGWYRQDPGKGRELVALI--NS-- 53 usage_00260.pdb 1 QVQLVESGGGSVQAGGSLSLSCAAST---Y---TDTVGWFRQAPGKEREGVAAI--YRR- 51 usage_00272.pdb 1 --QLQESGGGLVPAGGSLRLSCVDSGRTFS---STVMAWFRQAPGKEREFVATI--RWS- 52 usage_00286.pdb 1 -VQLQESGGGLVQAGDSLRLSCVASGR--A-FSSYGMGWFRQAPGKERAFVAAI--SRS- 53 usage_00301.pdb 1 -VQLQASGGGSVQAGGSLRLSCAASGY--T-IGPYCMGWFRQAPGKEREGVAAI--NMG- 53 usage_00342.pdb 1 --QLVESGGGLVQAGGSLRLSCAASGR--S-FSRDAMGWFRQAPGKERDVVAAI--NLN- 52 usage_00402.pdb 1 --QLVESGGRLVQAGDSLRLSCAASGR--T-FTTYLMGWFRQAPGKEREFVAAI--RWS- 52 usage_00406.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGS--I-FSINTMGWYRQAPGKQRELVAAI--HS-- 51 usage_00435.pdb 1 --QLQESGGGLVQAGGSLRLSCTASGR--T-FSSYAMGWFRQTPGKEREFVAAI--TWG- 52 usage_00436.pdb 1 -VQLQESGGGLVQAGGSLRLSCTASVN--I-IGGNHWAWYRQAPGQQRDLVASL--S--- 51 usage_00451.pdb 1 -VQLQESGGGSVQAGGSLRLSCTASGY--T-YRKYCMGWFRQAPGKEREGVACI--NSG- 53 usage_00499.pdb 1 QVQLQESGGGLVQAGGSLRLSCQASGN--I-FRINDMGWYRQAPGTQRELVAAI--TS-- 53 usage_00528.pdb 1 DVQLVESGGGLVQPGGSLRLSCAYSGS--L-FSILRMDWYRQAPGKERELVAGI--TRDA 55 usage_00532.pdb 1 --QLQESGGGSVQAGGSLTLSCTASGL--L-FRLASMGWYRQAPGKERELIATI--TV-- 51 l eSGGg Vq G SL LSC S W RQ pG r v usage_00030.pdb 50 ---GGGTLYADSVKGRT-ISRDKGKNTVYLQ-DSLKPEDTATYYCAAG-G---------- 93 usage_00040.pdb 54 ---GGGTNYADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDY-SA---Y-AP 105 usage_00041.pdb 53 ---YDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG--G------- 100 usage_00171.pdb 54 ---GGRTYYADSVKGRFTIAIDNAKNTVYLQMNSLKLDDTAVYYCAVRMP-Y----S--G 103 usage_00172.pdb 54 ---GGRTYYADSVKGRFTIAIDNAKNTVYLQMNSLKLDDTAVYYCAVRMP-Y----S--G 103 usage_00185.pdb 54 ---VGDTTYAGSVKGRFTISRDNAKNTVYLEMSSLKPEDTAVYYCNAFMS-TN---S-GR 105 usage_00260.pdb 52 ---TGYTYSADSVKGRFTLSQDNNKNTVYLQMNSLKPEDTGIYYCATGNS--V------- 99 usage_00272.pdb 53 ---GGNTYYADSVKGRFTISRDNARNTVYLQMNSLKPEDTAVYYCAGGTY--Y------- 100 usage_00286.pdb 54 ---GGLTQYAESLKGRFAISRDNAKNTVYLQMGSLKPEDTAVYYCAGDLY--G-L----- 102 usage_00301.pdb 54 ---GGITYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADSTIYA---S-YY 106 usage_00342.pdb 53 ---GGRTYSADSVKGRFTISRDNDKNTVYLQMSNLKPEDTAVYYCAAREG--D-VGL--- 103 usage_00402.pdb 53 ---GGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAAAARPSY---SGDY 106 usage_00406.pdb 52 ---GGSTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDY-GA---V-LY 103 usage_00435.pdb 53 ---GSTTLYADSVKGRFTMSRDNAKNTVYLQMNSLKPEDTAVYYCAADGSQ---Y----R 102 usage_00436.pdb 52 ---RYNANYADSVKGRFTISRDNAKNAAYLQMNSLKPEDTAIYFCALE------------ 96 usage_00451.pdb 54 ---GGTSYYADSVKGRFTISQDNAKDTVFLRMNSLKPEDTAIYYCALSSN--S------- 101 usage_00499.pdb 54 ---GGSTKYADSVKGRFTISKDNAKNTVYLQMNSLKPEDTAVYYCAAEDR-H-R--I-G- 104 usage_00528.pdb 56 AGYADSTNYADSVKGRFTISRDSAKNTVYLQMNSLKPEDTAVYYCNADAR-TIT----G- 109 usage_00532.pdb 52 ---GGKTNYKDSVQGRFIITRDNTKSTVTLQMNRLKPEDTAVYYCNTAS----------- 97 a SvkGRf D tv L Lk DTa YyC usage_00030.pdb 94 -Y--ELR-----D---R-TYGQWGQGTQVTVS- 113 usage_00040.pdb 106 ------------------PSGSRGRGTQVTV-- 118 usage_00041.pdb 101 -F--SSN-----R---E-LYDGWGQGTQVTVSS 121 usage_00171.pdb 104 -D--YRS-----S---G-TYDYWGQGTQVTVS- 123 usage_00172.pdb 104 -D--YRS-----S---G-TYDYWGQGTQVTVS- 123 usage_00185.pdb 106 ------------------TGSFWGQGTQVTVS- 119 usage_00260.pdb 100 -R--LAS-----W---E-GYFYWGQGTQVTVS- 119 usage_00272.pdb 101 ----GTL-----S---Y-KYDFWGRGTQVTVS- 119 usage_00286.pdb 103 -G--SHM-----E---N-EYDSWGQGTQVTVS- 122 usage_00301.pdb 107 -E--CGHGLSTGG---Y-GYDSWGQGTQVTVS- 131 usage_00342.pdb 104 VS--YKR-----S---S-NYPYWGQGTQVTV-- 123 usage_00402.pdb 107 -G--YTE-----A---L-RYDYWGQGTQVTV-- 125 usage_00406.pdb 104 ------------------EYDYWGQGTQVTV-- 116 usage_00435.pdb 103 -S--TYS-----FRDKP-DYGSWGQGTQVTVS- 125 usage_00436.pdb 97 -------------------NYYWGQGTQVTVS- 109 usage_00451.pdb 102 -VCPPGH-----V---A-WYNDWGQGTQVTVS- 123 usage_00499.pdb 105 ------------------TVGYWGQGTQVTVS- 118 usage_00528.pdb 110 ------------------RADYWGQGTQVTV-- 122 usage_00532.pdb 98 ------------P---AVGADTWGQGTRVTVS- 114 wG GTqVTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################