################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:57:20 2021 # Report_file: c_0207_11.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00013.pdb # 2: usage_00033.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00040.pdb # 6: usage_00042.pdb # 7: usage_00043.pdb # 8: usage_00046.pdb # 9: usage_00047.pdb # 10: usage_00058.pdb # 11: usage_00064.pdb # 12: usage_00094.pdb # 13: usage_00096.pdb # 14: usage_00098.pdb # 15: usage_00100.pdb # 16: usage_00103.pdb # 17: usage_00106.pdb # 18: usage_00107.pdb # 19: usage_00108.pdb # 20: usage_00139.pdb # 21: usage_00140.pdb # 22: usage_00141.pdb # 23: usage_00142.pdb # 24: usage_00143.pdb # 25: usage_00151.pdb # 26: usage_00152.pdb # 27: usage_00182.pdb # 28: usage_00196.pdb # 29: usage_00208.pdb # # Length: 154 # Identity: 20/154 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/154 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/154 ( 41.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 QVQLQESGPGLVRPSQTLSLTCTVSGFTFT-------DFYMNWVRQPPGRGLEWIGFIRD 53 usage_00033.pdb 1 QLQLQESGPGLVKPSETLSLTCTVSGASISA-----NSYYGVWVRQSPGKGLEWVGSIAY 55 usage_00035.pdb 1 QLQLQESGPGLVKPSETLSLTCTVSGASISA-----NSYYGVWVRQSPGKGLEWVGSIAY 55 usage_00036.pdb 1 --QLQESGPSLVKPSQTLSLTCSVTGDSIT-------SDAWSWIRKFPGNRLEYMGYVSA 51 usage_00040.pdb 1 QLQMQESGPGLVKPSETLSLSCTVSGDSIRGGEWGDKDYHWGWVRHSAGKGLEWIGSIHW 60 usage_00042.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSIS-------SYYWSWIRQPPGKGLEWIGYIYY 53 usage_00043.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSIS-------SYYWSWIRQPPGKGLEWIGYIYY 53 usage_00046.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSIS-------SHYWSWIRQSPGKGLQWIGYIYY 53 usage_00047.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSIS-------SHYWSWIRQSPGKGLQWIGYIYY 53 usage_00058.pdb 1 -VQLLESGPGLVKPAQTLSLSCAVSGGSIRS-----GGYYWSWIRQHPGKGLEWIGYIYH 54 usage_00064.pdb 1 -VQLQESGPGLVKPSETLSLTCTVSGGSIS-------SHYWSWIRQSPGKGLQWIGYIYY 52 usage_00094.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGGSISR-----GSHYWGWIRQPPGKGLEWIGSIYY 53 usage_00096.pdb 1 --QLQESGPGLVKPSQTLSLTCTVSGGSISS-----GDYFWSWIRQLPGKGLEWIGHIHN 53 usage_00098.pdb 1 -VQLQESGPGLVKPSETLSLTCAVSGYSISS------GYYWGWIRQPPGKGLEWIGSIYH 53 usage_00100.pdb 1 --QLQQWGAGLLKPSETLSLTCAVYGESFS-------AFSWSWIRQPPGKGLEWIGEIDH 51 usage_00103.pdb 1 QLQLQESGPGLVKPSETLSLTCTVSGASIDR-----STYYWGWIRQPPGKGLEWIANIYY 55 usage_00106.pdb 1 QVQLQESGPGLMKPSETLSLTCSVSGDSIR-------SDYWSWIRKPPGKGLEYIGYVSY 53 usage_00107.pdb 1 -VQLRESGPDLVTPSQSLSLTCTVTGYSITS------GYSWHWNRQFPGNKLEWMGYIHY 53 usage_00108.pdb 1 -VQLRESGPDLVTPSQSLSLTCTVTGYSITS------GYSWHWNRQFPGNKLEWMGYIHY 53 usage_00139.pdb 1 -VQLQESGPGLVKPSQTLSLTCTVSGGSISS-----GDYYWSWIRQPPGKGLEWIGYIYY 54 usage_00140.pdb 1 -VQLQESGPGLVKPSQTLSLTCTVSGGSISS-----GDYYWSWIRQPPGKGLEWIGYIYY 54 usage_00141.pdb 1 -VQLQESGPGLVKPSQTLSLTCTVSGGSISS-----GDYYWSWIRQPPGKGLEWIGYIYY 54 usage_00142.pdb 1 -VQLQESGPGLVKPSQTLSLTCTVSGGSISS-----GDYYWSWIRQPPGKGLEWIGYIYY 54 usage_00143.pdb 1 QVQLQESGPGLVKSSETLSLTCTVSGGSMG-------GYYWSWLRQSPVKGLEWIGYIFH 53 usage_00151.pdb 1 --QLQQWGAGLLKPSETLSLTCGVYGESLS-------GHYWSWVRQPPGKRLEWIGEIKH 51 usage_00152.pdb 1 --QLVESGPGLVKPLETLSLTCAVPGGSIR-------RNYWSWIRQPPGKGLEWIGHSYG 51 usage_00182.pdb 1 ELQLQESGPGLVKPSETLSLTCTVSGGSISS-----GSYYWDWIRQPPGKGLEWIGNIYK 55 usage_00196.pdb 1 -VQLLESGPGVVKPSETLSLTCTVSGASVNN-------YYWTWVRQPPGKGLEWIGNVYD 52 usage_00208.pdb 1 QVQLQESGPGVVKSSETLSLTCTVSGGSMG-------GTYWSWLRLSPGKGLEWIGYIFH 53 Ql G LSL C V G s W R pg L g usage_00013.pdb 54 K-AK-GY-TTEYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREGH-T----- 104 usage_00033.pdb 56 RGNSNSG-STYYNPSLKSRATVSVDSSKNQVSLRLTSVTAADTALYYCARRQL-L---D- 109 usage_00035.pdb 56 RGNSNSG-STYYNPSLKSRATVSVDTSKNQVSLRLTSVTAADTALYYCARRQL-L---D- 109 usage_00036.pdb 52 -----SG-STYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANW--------- 96 usage_00040.pdb 61 -----RG-TTHYKESLRRRVSMSIDTSRNWFSLRLASVTAADTAVYFCARHRH-HDVF-- 111 usage_00042.pdb 54 -----SG-STDYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRRS-D---FE 103 usage_00043.pdb 54 -----SG-STDYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRRS-D---FE 103 usage_00046.pdb 54 -----SG-STNYSPSLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGP--V---PA 102 usage_00047.pdb 54 -----SG-STNYSPSLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGP--V---PA 102 usage_00058.pdb 55 -----SG-NTYYNPSLKSRIAMSVDTSENKFSLRLNSVTAADTAVYYCARLDG------- 101 usage_00064.pdb 53 -----SG-STNYSPSLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGP--V---PA 101 usage_00094.pdb 54 -----SG-NTYFNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARLGP-D----- 101 usage_00096.pdb 54 -----SG-TTYYNPSLKSRVTISVDTSKKQFSLRLSSVTAADTAVYYCARDRG-G----- 101 usage_00098.pdb 54 -----SG-STYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAGLTQ------- 100 usage_00100.pdb 52 -----TG-SANYNPSLKSRISMSVDTSMNQFSLELLSMTVADTAVYYCARGGRKV----- 100 usage_00103.pdb 56 -----NG-RAVYSPSLKSRVTISVDTSKNQFSLKVR-----DTAVYYCATRWN-Y----- 98 usage_00106.pdb 54 -----SG-STYYNPSLKSRVTISVDTSKNRFSLKLNSVTAADTAVYYCARW--------- 98 usage_00107.pdb 54 -----SG-STNYNPSLRGRISITRDTSKNQFFLQLNSVTTEDTATYYCARYG-------- 99 usage_00108.pdb 54 -----SG-STNYNPSLRGRISITRDTSKNQFFLQLNSVTTEDTATYYCARYG-------- 99 usage_00139.pdb 55 -----SG-STDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSI-F----- 102 usage_00140.pdb 55 -----SG-STDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSI-F----- 102 usage_00141.pdb 55 -----SG-STDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSI-F----- 102 usage_00142.pdb 55 -----SG-STDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSI-F----- 102 usage_00143.pdb 54 -----TG-HTNYNPSLESRVTVSVDTSENQFSLRLRSVTAADTAVYYCASLPR-G----- 101 usage_00151.pdb 52 -----NG-SPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSN-W----- 99 usage_00152.pdb 52 -----SGGSTNYNPSLESRVTLSVDTSKNLFSLKLTSVTAADTAVYYCARTVW-Y----- 100 usage_00182.pdb 56 -----SG-STYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARERG-M----- 103 usage_00196.pdb 53 -----SG-DTNYNPSLSSRLSLSMDTSKNQFSLRLSSVTAADTATYYCARYHR-H----- 100 usage_00208.pdb 54 -----TG-ETNYSPSLKGRVSISVDTSEDQFSLRLRSVTAADTAVYFCASLPR-G----- 101 g y pSl R L DTA Y CA usage_00013.pdb 105 ---------A-----AP-F-DYWGQGSLVTVS-- 120 usage_00033.pdb 110 -D-------G--T--GY---QWA----------- 117 usage_00035.pdb 110 -D-------G--T--GY---QWA----------- 117 usage_00036.pdb 97 ----------------D-G-DYWGQGTLVT---- 108 usage_00040.pdb 112 -M-------LVP-IAGW-F-DVWGPGVQVTVS-- 132 usage_00042.pdb 104 TV-------DFI-Y-HY-M-DVWGKGTTVT---- 122 usage_00043.pdb 104 TV-------DFI-Y-HY-M-DVWGKGTTVTVS-- 124 usage_00046.pdb 103 VFY------G--D--YR-L-DPWGQGTLVT---- 120 usage_00047.pdb 103 VFY------G--D--YR-L-DPWGQGTLVT---- 120 usage_00058.pdb 102 ---------------YT-L-DIWGQGTLVT---- 114 usage_00064.pdb 102 VFY------G--D--YR-L-DPWGQGTLVT---- 119 usage_00094.pdb 102 -D-------Y--TL-DG-M-DVWGQGTTVTV--- 119 usage_00096.pdb 102 ---------D--YY-YG-M-DVWGQGTTVTVS-- 119 usage_00098.pdb 101 -S-------S--H--ND---ANWGQGTLVTVS-- 117 usage_00100.pdb 101 -YHAYWSGYV--N--NC-F-DPWGQGTLVTV--- 124 usage_00103.pdb 99 ---------F-----FD-F-DYWGRGTLVTV--- 113 usage_00106.pdb 99 ----------------D-G-DYWGQGILVT---- 110 usage_00107.pdb 100 --------------------GYWGQGTSVTVS-- 111 usage_00108.pdb 100 --------------------GYWGQGTSVTVS-- 111 usage_00139.pdb 103 ---------G--V--GT-F-DYWGQGTLVTVS-- 119 usage_00140.pdb 103 ---------G--V--GT-F-DYWGQGTLVTVS-- 119 usage_00141.pdb 103 ---------G--V--GT-F-DYWGQGTLVTVS-- 119 usage_00142.pdb 103 ---------G--V--GT-F-DYWGQGTLVTVS-- 119 usage_00143.pdb 102 QL-------V--N--AF-F-DNWGQGTLVTVASA 122 usage_00151.pdb 100 ---------P--Y--LP-F-DPWGQGTLVT---- 114 usage_00152.pdb 101 -YT-S----G--T--HY-F-DHWGQGVLVTVSS- 121 usage_00182.pdb 104 ---------------HY-M-DVWGKGTTVTVS-- 118 usage_00196.pdb 101 -F-------I-----RGPLS-------------- 107 usage_00208.pdb 102 QL-------V--N--AY-F-RNWGRGSLVS---- 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################