################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:44 2021 # Report_file: c_0265_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00028.pdb # 7: usage_00041.pdb # # Length: 172 # Identity: 86/172 ( 50.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/172 ( 71.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/172 ( 4.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -------LDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVH 53 usage_00024.pdb 1 LQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVH 60 usage_00025.pdb 1 -------LDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMH 53 usage_00026.pdb 1 LQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVH 60 usage_00027.pdb 1 LQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVH 60 usage_00028.pdb 1 -------LDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVH 53 usage_00041.pdb 1 -------LDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAK 53 LDY k LG DvIWLSPV SP dDNGYDISDY fGT eDm Li e h usage_00023.pdb 54 KRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSA 113 usage_00024.pdb 61 KRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSA 120 usage_00025.pdb 54 ERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRPGK-EGKEPNNWGAAFSGSA 112 usage_00026.pdb 61 KRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSA 120 usage_00027.pdb 61 KRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSA 120 usage_00028.pdb 54 KRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSA 113 usage_00041.pdb 54 EHHIKIVMDLVVNHTSDQHKWFVEAKKGKDNQYRDYYIWRDPV-DEHEPNDLKSAFSGSA 112 r mKivMDLVVNHTSDeH WF EsrKsKDN YRDYY W dpk dg EPNnwgs FSGSA usage_00023.pdb 114 WTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDV 165 usage_00024.pdb 121 WTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDV 172 usage_00025.pdb 113 WQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMMKFWLEKGIDGFRMDV 164 usage_00026.pdb 121 WTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDA 172 usage_00027.pdb 121 WTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDS 172 usage_00028.pdb 114 WTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDV 165 usage_00041.pdb 113 WKYDERSGQYYLHFFADQQPDLNWQNTELRQKIYNMMNFWLDKGIGGFRMDV 164 W YDE tgqYYLH FskkQPDLNW Ne vR vY M FW d G dG RMD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################