################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:36 2021 # Report_file: c_1467_8.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00309.pdb # 2: usage_00310.pdb # 3: usage_00312.pdb # 4: usage_00313.pdb # 5: usage_00314.pdb # 6: usage_00315.pdb # 7: usage_00513.pdb # 8: usage_00813.pdb # 9: usage_01196.pdb # 10: usage_01483.pdb # 11: usage_01732.pdb # # Length: 32 # Identity: 2/ 32 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 32 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 32 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00309.pdb 1 ------PLSWMKEKIFSEVTPKCEDCQSLVKP 26 usage_00310.pdb 1 -------LSWMKEKIFSEVTPKCEDCQSLVKP 25 usage_00312.pdb 1 ------PLSWMKEKIFSEVTPKCEDCQSLVKP 26 usage_00313.pdb 1 -------LSWMKEKIFSEVTPKCEDCQSLVKP 25 usage_00314.pdb 1 -------LSWMKEKIFSEVTPKCEDCQSLVKP 25 usage_00315.pdb 1 ------PLSWMKEKIFSEVTPKCEDCQSLVKP 26 usage_00513.pdb 1 ------PLSWMKEKIFSEVTPKCEDCQSLVKP 26 usage_00813.pdb 1 ------PLSWMKEKIFSEVTPKCEDCQSLVKP 26 usage_01196.pdb 1 -------LSWMKEKIFSEVTPKCEDCQSLVKP 25 usage_01483.pdb 1 SSVKEQLISNLALLMEKGQV---------AVP 23 usage_01732.pdb 1 -------LSWMKEKIFSEVTPKCEDCQSLVKP 25 lSwmkekifsevt vkP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################