################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:16 2021 # Report_file: c_0875_125.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00853.pdb # 2: usage_00856.pdb # 3: usage_00859.pdb # 4: usage_01030.pdb # # Length: 121 # Identity: 37/121 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/121 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/121 ( 61.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00853.pdb 1 -----------KLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKS 49 usage_00856.pdb 1 ----------------------------------CKHYRAIYDTPCIQAESEKWQQALKS 26 usage_00859.pdb 1 ----------------------------------CKHYRAIYDTPCIQAESEKWQQALKS 26 usage_01030.pdb 1 NTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKS 60 CKHYRAIYDTPCIQAESEKWQQALKS usage_00853.pdb 50 VVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLF-------------------- 89 usage_00856.pdb 27 VVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELR 86 usage_00859.pdb 27 VVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELR 86 usage_01030.pdb 61 VVLYVILAP-------------------FDNEQSDLVHRISGD----------------- 84 VVLYVILAP eipkykDLlklf usage_00853.pdb - usage_00856.pdb 87 K 87 usage_00859.pdb 87 K 87 usage_01030.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################