################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:56 2021 # Report_file: c_1148_198.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00425.pdb # 2: usage_02376.pdb # 3: usage_02377.pdb # 4: usage_02378.pdb # 5: usage_02379.pdb # 6: usage_02380.pdb # # Length: 28 # Identity: 2/ 28 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 28 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 28 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00425.pdb 1 -GQISFDDHS-LHLSHVQDEAHFVFWC- 25 usage_02376.pdb 1 DIRFTAR----THFTNEGQGKQHVAFAA 24 usage_02377.pdb 1 -IRFTAR----THFTNEGQGKQHVAFAA 23 usage_02378.pdb 1 DIRFTAR----THFTNEGQGKQHVAFAA 24 usage_02379.pdb 1 -IRFTARGSVFTHFTNEGQGKQHVAFAA 27 usage_02380.pdb 1 -IRFTAR----THFTNEGQGKQHVAFAA 23 irftar tHftnegqgkqhVafa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################