################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:50 2021 # Report_file: c_0377_18.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00139.pdb # 2: usage_00140.pdb # 3: usage_00198.pdb # # Length: 141 # Identity: 137/141 ( 97.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 139/141 ( 98.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/141 ( 1.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 -EAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 59 usage_00140.pdb 1 -EAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 59 usage_00198.pdb 1 MEAVKTFNSELYSLMDMKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60 EAVKTFNSELYSLnDyKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV usage_00139.pdb 60 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 119 usage_00140.pdb 60 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 119 usage_00198.pdb 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN usage_00139.pdb 120 NVFKSEIIQPLLDMAAALEHH 140 usage_00140.pdb 120 NVFKSEIIQPLLDMAAALEHH 140 usage_00198.pdb 121 NVFKSEIIQPLLDMAAALEH- 140 NVFKSEIIQPLLDMAAALEH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################