################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:59 2021 # Report_file: c_1056_22.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00452.pdb # 2: usage_00453.pdb # 3: usage_00477.pdb # 4: usage_00478.pdb # 5: usage_00666.pdb # 6: usage_00667.pdb # 7: usage_00668.pdb # 8: usage_00669.pdb # 9: usage_00670.pdb # 10: usage_00671.pdb # 11: usage_00807.pdb # # Length: 57 # Identity: 12/ 57 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 57 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 57 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00452.pdb 1 --KKLVKLLKD--MHETMLIADGVGLAAPQVGVSLQVAVVDVDDD-T--GKIELIN- 49 usage_00453.pdb 1 --KKLVKLLKD--MHETMLIADGVGLAAPQVGVSLQVAVVDVDDD-T--GKIELIN- 49 usage_00477.pdb 1 --ENLKKTIER--MIETMYHYDGVGLAAPQVGISQRFFVMDVGNG-P-----VAVIN 47 usage_00478.pdb 1 --ENLKKTIER--MIETMYHYDGVGLAAPQVGISQRFFVMDVGNG-P-----VAVI- 46 usage_00666.pdb 1 --DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 52 usage_00667.pdb 1 D-DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 53 usage_00668.pdb 1 D-DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 53 usage_00669.pdb 1 D-DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 53 usage_00670.pdb 1 D-DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 53 usage_00671.pdb 1 D-DELRQTIRQ--MLQTMYSADGIGLAAPQVGINKQLIVIDLELE-DEQAPPLVLIN 53 usage_00807.pdb 1 -K-KESELYDQCE----AWASDGIGLAAPQVGINKRVIVVDETTEEH-GKYAHLVN- 49 l m DG GLAAPQVG V D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################