################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:46 2021 # Report_file: c_0110_28.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00017.pdb # 2: usage_00135.pdb # 3: usage_00159.pdb # 4: usage_00160.pdb # # Length: 224 # Identity: 38/224 ( 17.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/224 ( 43.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/224 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 PQDRRDGFRALVDGVFDTTLD--QAEA-QANTARLYEVLDQLIAAKRATPGDDMTSLLIA 57 usage_00135.pdb 1 ----QADLARSLHASRTE-RS-GKRR--TAAGNKFMTYMNKMTARTRRDPGDDMFGVVVR 52 usage_00159.pdb 1 PAERRAEFQEIAEAMMRV--DQ-DAAATEAAGMRLGGLLYQLVQERRANPGDDLISALIT 57 usage_00160.pdb 1 PAERRAEFQEIAEAMMRV--DQ-DAAATEAAGMRLGGLLYQLVQERRANPGDDLISALIT 57 ra f a d a Aag rl l ql Ra PGDD s li usage_00017.pdb 58 A-----RDDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVT-W 111 usage_00135.pdb 53 E-----YGDEITDAELTGVAAFVMGAGADQVARFLAAGAWLMADDPEQFALLREKPD-TV 106 usage_00159.pdb 58 TEDPDG---VIDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDRPDQLALLQKDPSL-I 113 usage_00160.pdb 58 TEDPDG---VIDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDRPDQLALLQKDPSL-I 113 i d L a A dtta i g llldrPdQlALl k p usage_00017.pdb 112 ADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHE---DA 168 usage_00135.pdb 107 PDWLDEVIRYLTTDEKTHPRVATDDVRIG-DHLIKAGDTVTCSLLAANRRN----FPRPE 161 usage_00159.pdb 114 GNAVEELLRYLTIGQFGAERVATQDGEIG-GVRIAKGEQVVTHLLSADFDPAFVE---DP 169 usage_00160.pdb 114 GNAVEELLRYLTIGQFGAERVATQDGEIG-GVRIAKGEQVVTHLLSADFDPAFVE---DP 169 veE lRylt RvAt D ig g Ia Ge v ll A p d usage_00017.pdb 169 DTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF- 211 usage_00135.pdb 162 DRFDITRVRPEHLAFGHGIHHCLGRSLAELVFRTAIPALAHRF- 204 usage_00159.pdb 170 ERFDITRRPAPHLAFGFGAHQCIGQQLARIELQIVFGTLFRRFP 213 usage_00160.pdb 170 ERFDITRRPAPHLAFGFGAHQCIGQQLARIELQIVFGTLFRRFP 213 rFDiTR HLAFG G H C G LAr e Lf RF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################