################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:11 2021 # Report_file: c_0066_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00004.pdb # 3: usage_00010.pdb # 4: usage_00039.pdb # 5: usage_00133.pdb # 6: usage_00203.pdb # 7: usage_00205.pdb # # Length: 202 # Identity: 156/202 ( 77.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 185/202 ( 91.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/202 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 56 usage_00004.pdb 1 ----LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 56 usage_00010.pdb 1 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP----------PSLSKMIQMAGEIAD 50 usage_00039.pdb 1 -----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 55 usage_00133.pdb 1 ----LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 56 usage_00203.pdb 1 -----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 55 usage_00205.pdb 1 -----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 55 GVVSkGQPTLVvMELMahGDLKSYLRSLRP PtLqeMIQMAaEIAD usage_00002.pdb 57 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 116 usage_00004.pdb 57 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 116 usage_00010.pdb 51 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMSPESL 110 usage_00039.pdb 56 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 115 usage_00133.pdb 57 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 116 usage_00203.pdb 56 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 115 usage_00205.pdb 56 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMAPESL 115 GMAYLNAkKFVHRDLAARNCMVAhDFTVKIGDFGMTRDIETDRKGGKGLLPVRWMaPESL usage_00002.pdb 117 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 176 usage_00004.pdb 117 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 176 usage_00010.pdb 111 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 170 usage_00039.pdb 116 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 175 usage_00133.pdb 117 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 176 usage_00203.pdb 116 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 175 usage_00205.pdb 116 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 175 KDGVFTTsSDmWSFGVVLWEItsLAEQPYQGLSNEQVLkFVMdGGyLDqPDNCPervtdL usage_00002.pdb 177 MRMCWQFNPNMRPTFLEIVNL- 197 usage_00004.pdb 177 MRMCWQFNPNMRPTFLEIVNLL 198 usage_00010.pdb 171 MRMCWQYNPKMRPSFLEIISSI 192 usage_00039.pdb 176 MRMCWQFNPNMRPTFLEIVNL- 196 usage_00133.pdb 177 MRMCWQFNPNMRPTFLEIVNLL 198 usage_00203.pdb 176 MRMCWQFNPKMRPTFLEIVNL- 196 usage_00205.pdb 176 MRMCWQFNPNMRPTFLEIVNLL 197 MRMCWQfNP MRPtFLEIvnl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################