################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:20 2021 # Report_file: c_1200_400.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00728.pdb # 2: usage_01461.pdb # 3: usage_01544.pdb # 4: usage_01607.pdb # 5: usage_03700.pdb # 6: usage_03701.pdb # 7: usage_04217.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 60 ( 5.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 60 ( 76.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00728.pdb 1 -DATFLYSFED-S--G-V-GDV--TGFLALDNTN-KLIVLSFR----------------- 34 usage_01461.pdb 1 ADATFLYSFED-S--G-V-GDV--TGFLALDNTN-KLIVLSFRGS--------------- 37 usage_01544.pdb 1 -DATFLYSFED-S--G-V-GDV--TGFLALDNTN-KLIVLSFR----------------- 34 usage_01607.pdb 1 --SDSSSLSGGFF--G-PQGEELGFRFLSDD--Q-KVAVVGSAKT--------------- 37 usage_03700.pdb 1 -GATIVASF---T--GSK-TGI--GGYVATDPTR-KEIVVSFRGS--------------- 35 usage_03701.pdb 1 -GATIVASFTG-----SK-TGI--GGYVATDPTR-KEIVVSFRGS--------------- 35 usage_04217.pdb 1 -----KTTTTN-SKRE-E-K--------------LFNVTSTLR-INTTTNEIFYCTFRRL 37 k v r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################