################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:04 2021 # Report_file: c_1297_213.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00124.pdb # 4: usage_01667.pdb # 5: usage_01979.pdb # 6: usage_01980.pdb # 7: usage_02014.pdb # 8: usage_02114.pdb # 9: usage_02210.pdb # 10: usage_02964.pdb # 11: usage_03253.pdb # # Length: 41 # Identity: 2/ 41 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 41 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 -DGNCAALA-ERKFG--QGKGLENFVTLITGTGIGGGIIHQ 37 usage_00123.pdb 1 -DGNCAALA-ERKFG--QGKGLENFVTLITGTGIGGGIIHQ 37 usage_00124.pdb 1 -DGNCAALA-ERKFG--QGKGLENFVTLITGTGIGGGIIHQ 37 usage_01667.pdb 1 TDVNAAALG-EFLFG--EAKGLDSCLYITIGTGIGAGAIV- 37 usage_01979.pdb 1 HDISAW-TA-EALFG--ASRGARDVIQVVIDHNVGAGVIT- 36 usage_01980.pdb 1 HDISAW-TA-EALFG--ASRGARDVIQVVIDHNVGAGVITD 37 usage_02014.pdb 1 TDVNAAALG-EFLFG--EAKGLDSCLYITIGTGIGAGAIV- 37 usage_02114.pdb 1 NDAQAA-AWAEFQAL---DGDITDMVFITVSTGVGGGVVSG 37 usage_02210.pdb 1 KNINCYTLA-ELWLG--EGKQSNNFATVSVGAGLGLSVVIN 38 usage_02964.pdb 1 -EANLSALY-ERNFNHN--LSYNNLIALSIHKGIGAGL--- 34 usage_03253.pdb 1 -NINCYTLA-ELWLG--EGKQSNNFATVSVGAGLGLSVVI- 36 E G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################