################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:15 2021 # Report_file: c_0182_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00007.pdb # 4: usage_00012.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00029.pdb # # Length: 196 # Identity: 87/196 ( 44.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 155/196 ( 79.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/196 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----QRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWS 56 usage_00004.pdb 1 ----QRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWS 56 usage_00007.pdb 1 QNLPQRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWS 60 usage_00012.pdb 1 ----QTSIELFLIVDHSMYAKYNSNSSKITTTLKARVNIMNAIYSSLNLVITLSGIEMWS 56 usage_00021.pdb 1 ---PQRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWS 57 usage_00022.pdb 1 ---PQRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWS 57 usage_00029.pdb 1 ---PQRYIELVVVADRRVFMKYNSDLNIIRTRVHEIVNIINEFYRSLNIRVSLTDLEIWS 57 QryIELvvvaDhrvfmKYNSdln IrTrvheiVN iN fYrSLNi vsLtdlEiWS usage_00003.pdb 57 NEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPK 116 usage_00004.pdb 57 NEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPK 116 usage_00007.pdb 61 NEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPK 120 usage_00012.pdb 57 AADLITVQSSSRNTLKLFASWRETDLLKRTSNDNAQLLTATNFNGNTVGLAYLKTMCNSK 116 usage_00021.pdb 58 NEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPK 117 usage_00022.pdb 58 NEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPK 117 usage_00029.pdb 58 GQDFITIQSSSSNTLNSFGEWRERVLLTRKRHDNAQLLTAINFEGKIIGKAYTSSMCNPR 117 D I iQS Ss TLn FaeWREtdLL RkshDNAQLLTAi t GlA l tMC pk usage_00003.pdb 117 LSIGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTKGRSYEF 174 usage_00004.pdb 117 LSIGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTKGRSYEF 174 usage_00007.pdb 121 LSIGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTKGRSYEF 178 usage_00012.pdb 117 YSVGLIQDHSAIPLLMAVTMAHELGHNLGMNHDGA----GCSCATCIMAPVLSSGPAKSF 172 usage_00021.pdb 118 LSIGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTKGRSYEF 175 usage_00022.pdb 118 LSIGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTKGRSYEF 175 usage_00029.pdb 118 SSVGIVKDHSPINLLVAVTMAHELGHNLGMEHDGKDCLRGAS--LCIMRPGLTPGRSYEF 175 S GivqDHSpInLLm VTMAHELGHNLGMeHDGk GaS lCIMrPgLt GrsyeF usage_00003.pdb 175 SDDSMHYYERFLKQYK 190 usage_00004.pdb 175 SDDSMHYYERFLKQYK 190 usage_00007.pdb 179 SDDSMHYYERFLKQYK 194 usage_00012.pdb 173 SDCSKHDYQSFLTIH- 187 usage_00021.pdb 176 SDDSMHYYERFLKQYK 191 usage_00022.pdb 176 SDDSMHYYERFLK--- 188 usage_00029.pdb 176 SDDSMGYYQKFLNQYK 191 SDdSmhyY FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################