################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:00 2021 # Report_file: c_1382_164.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00683.pdb # 2: usage_01104.pdb # 3: usage_01384.pdb # 4: usage_01678.pdb # 5: usage_01679.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 61 ( 8.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 61 ( 55.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00683.pdb 1 ----PEEDIDKIVDNVMLLVEKNLKPKGASLGRIMV-------L-EREDVREILKLA--- 45 usage_01104.pdb 1 SLEKLKAALDRG--DLTRLK---------G-----FGP------KRAERIREGLALA--Q 36 usage_01384.pdb 1 ----TVDAYESE--QVTAQV---------N--------PYFNNAPVGKIFVNRANNV--- 34 usage_01678.pdb 1 ----REEDLDRAADIALASP---------Y-WNPRP-------I-EREPIRALLQAAYE- 37 usage_01679.pdb 1 ----REEDLDRAADIALASP---------Y-WNPRP-------I-EREPIRALLQAAYE- 37 d e r l a usage_00683.pdb - usage_01104.pdb 37 A 37 usage_01384.pdb - usage_01678.pdb - usage_01679.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################