################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:37 2021 # Report_file: c_0406_76.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00030.pdb # 2: usage_00031.pdb # 3: usage_00037.pdb # 4: usage_00048.pdb # 5: usage_00085.pdb # # Length: 95 # Identity: 8/ 95 ( 8.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 95 ( 16.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 95 ( 43.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 ---EAYVVAP-------GESLELQCMLKD-A--AVISWTKDGVHLGPNNR-TVLI-GEYL 45 usage_00031.pdb 1 ---EAYVVAP-------GESLELQCML------AVISWTKDGVHLGPNNR-TVLI-GEYL 42 usage_00037.pdb 1 GSYRQHFFKH-------GGTAELKCSQKSNL--ARVFWKFQNGVLKAESPKYGLMGRKNL 51 usage_00048.pdb 1 --VESLLVHP-------GDLLQLRCRLRD-DV-QSINWLRDGVQLVESNR-TRIT-GEEV 47 usage_00085.pdb 1 ---DVYVVELDWYPDAPGEMVVLTCDTPE---EDGITWTLDQSSEV------LGS-GKTL 47 v G L C i W d l g l usage_00030.pdb 46 QIKGATPRDSGLYACTAARTV--DSETWIFMVNVT 78 usage_00031.pdb 43 QIKGATPRDSGLYACTA-------SETWIFMVNVT 70 usage_00037.pdb 52 LIFNLSEGDSGVYQCLSEERVKNKTVFQV------ 80 usage_00048.pdb 48 EVRDSIPADSGLYACVTSSPS--GSDTTYFSVN-- 78 usage_00085.pdb 48 TIQVKEFGDAGQYTC------------SHSLLL-- 68 i DsG Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################