################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:34 2021 # Report_file: c_1292_51.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00112.pdb # 2: usage_00122.pdb # 3: usage_00123.pdb # 4: usage_00124.pdb # 5: usage_00125.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 30 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 30 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 --SPDFRQRVSLTRDRDLFTAHMDIRG--- 25 usage_00122.pdb 1 -GPQWWAR-CKQMNVL-D--SFINYYDSEK 25 usage_00123.pdb 1 TGPQWWAR-CKQMNVL-D--SFINYYDSEK 26 usage_00124.pdb 1 TGPQWWAR-CKQMNVL-D--SFINYYDSEK 26 usage_00125.pdb 1 TGPQWWAR-CAQMNVL-D--SFINYYDS-- 24 pqwwar c qmnvl d sfinyyd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################