################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:22 2021 # Report_file: c_1422_26.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00004.pdb # 2: usage_00110.pdb # 3: usage_00112.pdb # 4: usage_00170.pdb # 5: usage_00376.pdb # 6: usage_00543.pdb # 7: usage_00547.pdb # 8: usage_00549.pdb # 9: usage_00561.pdb # 10: usage_00570.pdb # 11: usage_00614.pdb # 12: usage_00681.pdb # 13: usage_00709.pdb # 14: usage_00826.pdb # 15: usage_00943.pdb # 16: usage_00944.pdb # 17: usage_01169.pdb # # Length: 78 # Identity: 25/ 78 ( 32.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 78 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 78 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ARVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 60 usage_00110.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00112.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00170.pdb 1 ------------LPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNP 48 usage_00376.pdb 1 ------------LPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRP 48 usage_00543.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00547.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRR- 58 usage_00549.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRR- 58 usage_00561.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00570.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00614.pdb 1 DANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNP 60 usage_00681.pdb 1 ------------LPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRP 48 usage_00709.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRV 59 usage_00826.pdb 1 -RVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRR- 58 usage_00943.pdb 1 ------------LPGTDINPNSFWSGVAKVVADLTPQNQSLLNSRDELQAQIDKWHRHRV 48 usage_00944.pdb 1 ------------LPGTDINPNSFWSGVAKVVADLTPQNQSLLNSRDELQAQIDKWHRHRV 48 usage_01169.pdb 1 ARVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRR- 59 LPGT FW V DL P N LL RD QA D WHR usage_00004.pdb 61 IEPID-MDAYRQFLTEIG 77 usage_00110.pdb 60 IEPID-MDAYRQFLTEIG 76 usage_00112.pdb 60 IEPID-MDAYRQFLTEIG 76 usage_00170.pdb 49 GPVKD-KAAYKSFLRELG 65 usage_00376.pdb 49 ---ID-MDAYRQFLTEIG 62 usage_00543.pdb 60 IPI-D-MDAYRQFLTEIG 75 usage_00547.pdb 59 ---ID-MDAYRQFLTEIG 72 usage_00549.pdb 59 --PID-MDAYRQFLTEIG 73 usage_00561.pdb 60 IEPID-MDAYRQFLTEIG 76 usage_00570.pdb 60 IEPID-MDAYRQFLTEIG 76 usage_00614.pdb 61 GPVKD-KAAYKSFLRE-- 75 usage_00681.pdb 49 ---ID-MDAYRQFLTEIG 62 usage_00709.pdb 60 IEPID-MDAYRQFLTEIG 76 usage_00826.pdb 59 ---ID-MDAYRQFLTEIG 72 usage_00943.pdb 49 ---IFDVDAYRQFLIDIG 63 usage_00944.pdb 49 IEPFD-VDAYRQFLIDIG 65 usage_01169.pdb 60 --PID-MDAYRQFLTEIG 74 d AY FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################