################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:20 2021 # Report_file: c_1105_68.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00219.pdb # 2: usage_00221.pdb # 3: usage_00223.pdb # 4: usage_00224.pdb # 5: usage_00226.pdb # 6: usage_00228.pdb # 7: usage_00359.pdb # 8: usage_00361.pdb # 9: usage_00363.pdb # 10: usage_00365.pdb # 11: usage_00395.pdb # 12: usage_00946.pdb # 13: usage_00950.pdb # # Length: 125 # Identity: 59/125 ( 47.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/125 ( 76.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/125 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00219.pdb 1 ----------------PALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 44 usage_00221.pdb 1 LSYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 56 usage_00223.pdb 1 ---GLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 57 usage_00224.pdb 1 ----------------PALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 44 usage_00226.pdb 1 LSYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 56 usage_00228.pdb 1 ---GLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 57 usage_00359.pdb 1 ---------------APALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 45 usage_00361.pdb 1 -SYEERLSGS----QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 55 usage_00363.pdb 1 ---------------APALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 45 usage_00365.pdb 1 ----LSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 56 usage_00395.pdb 1 ----SSEEA-KGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT 55 usage_00946.pdb 1 --------------QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 46 usage_00950.pdb 1 --------------QAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATS 46 paLYaLsllvVFLcLAALYESWSIPfsVmLVvPLGvIGAllats usage_00219.pdb 45 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 93 usage_00221.pdb 57 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 105 usage_00223.pdb 58 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 106 usage_00224.pdb 45 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 93 usage_00226.pdb 57 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 105 usage_00228.pdb 58 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 106 usage_00359.pdb 46 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 94 usage_00361.pdb 56 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 104 usage_00363.pdb 46 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 94 usage_00365.pdb 57 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 105 usage_00395.pdb 56 GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAALEA 115 usage_00946.pdb 47 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 95 usage_00950.pdb 47 MRG-----------LSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEA 95 mRg lsNDvfFQVGllTtiGLSAKNAILIvEFAKeLheQGKgiVEAAiEA usage_00219.pdb 94 CRMR- 97 usage_00221.pdb 106 CRMR- 109 usage_00223.pdb 107 CRM-- 109 usage_00224.pdb 94 CRMR- 97 usage_00226.pdb 106 CRMR- 109 usage_00228.pdb 107 CRM-- 109 usage_00359.pdb 95 CRM-- 97 usage_00361.pdb 105 CRMR- 108 usage_00363.pdb 95 CRM-- 97 usage_00365.pdb 106 CR--- 107 usage_00395.pdb 116 ARLR- 119 usage_00946.pdb 96 CRMRL 100 usage_00950.pdb 96 CRM-- 98 cR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################