################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:58 2021 # Report_file: c_0621_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00097.pdb # 4: usage_00227.pdb # 5: usage_00228.pdb # 6: usage_00229.pdb # 7: usage_00230.pdb # # Length: 78 # Identity: 13/ 78 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 78 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 78 ( 28.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 SEEELCSWYQSFLKDCPTGRITQQQFQSI-Y-----AKFFPDTDP-KAYAQHVFRSFDSN 53 usage_00049.pdb 1 ----CHQWYKKFMTECPSGQLTLYEFKQFFGLKNLS-------PSANKYVEQMFETFDFN 49 usage_00097.pdb 1 DRREIQQWHKGFLRDCPSGQLAREDFVKI-Y-----KQFFPFGSP-EDFANHLFTVFDKD 53 usage_00227.pdb 1 TEEELSSWYQSFLKECPSGRITRQEFQTI-Y-----SKFFPEADP-KAYAQHVFRSFDAN 53 usage_00228.pdb 1 TEEELSSWYQSFLKECPSGRITRQEFQTI-Y-----SKFFPEADP-KAYAQHVFRSFDAN 53 usage_00229.pdb 1 TEEELSSWYQSFLKECPSGRITRQEFQTI-Y-----SKFFPEADP-KAYAQHVFRSFDAN 53 usage_00230.pdb 1 TEEELSSWYQSFLKECPSGRITRQEFQTI-Y-----SKFFPEADP-KAYAQHVFRSFDAN 53 Wy Fl CPsG t F i y p ya h F FD n usage_00048.pdb 54 LDGTLDFKEYVIALH--- 68 usage_00049.pdb 50 KDGYIDFMEYVAAL-SLV 66 usage_00097.pdb 54 NNGFIHFEEFITVLSTTS 71 usage_00227.pdb 54 SDGTLDFKEYVIALHMTS 71 usage_00228.pdb 54 SDGTLDFKEYVIALHMTS 71 usage_00229.pdb 54 SDGTLDFKEYVIALHMTS 71 usage_00230.pdb 54 SDGTLDFKEYVIALHMTS 71 dG dF Eyv aL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################