################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:28:59 2021 # Report_file: c_1137_41.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00067.pdb # 4: usage_00217.pdb # 5: usage_00218.pdb # 6: usage_00219.pdb # 7: usage_00220.pdb # 8: usage_00221.pdb # 9: usage_00229.pdb # 10: usage_00230.pdb # 11: usage_00231.pdb # 12: usage_00232.pdb # 13: usage_00233.pdb # 14: usage_00234.pdb # 15: usage_00238.pdb # 16: usage_00239.pdb # 17: usage_00240.pdb # 18: usage_00359.pdb # 19: usage_00364.pdb # 20: usage_00365.pdb # 21: usage_00366.pdb # 22: usage_00367.pdb # 23: usage_00409.pdb # 24: usage_00410.pdb # 25: usage_00671.pdb # 26: usage_00672.pdb # 27: usage_00716.pdb # 28: usage_00717.pdb # 29: usage_00718.pdb # 30: usage_00719.pdb # # Length: 58 # Identity: 25/ 58 ( 43.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 58 ( 43.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 58 ( 13.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -LEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMK------ 51 usage_00020.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQ---- 54 usage_00067.pdb 1 -LEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQK--- 54 usage_00217.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKE-- 56 usage_00218.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKE-- 56 usage_00219.pdb 1 -LEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ- 56 usage_00220.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ- 57 usage_00221.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQA 58 usage_00229.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKK----- 53 usage_00230.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQ---- 54 usage_00231.pdb 1 TLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELLKKQ---- 54 usage_00232.pdb 1 TLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELLKK----- 53 usage_00233.pdb 1 -LEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELLKKQ---- 53 usage_00234.pdb 1 TLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELL------- 51 usage_00238.pdb 1 TLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKE-- 56 usage_00239.pdb 1 TLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ- 57 usage_00240.pdb 1 TLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQA 58 usage_00359.pdb 1 SLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQAQQA-- 56 usage_00364.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ- 57 usage_00365.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQ---- 54 usage_00366.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKE-- 56 usage_00367.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ- 57 usage_00409.pdb 1 TLEDLKSISPLFSSDVSQVFNFVNSVEQYTAMGGTAKSSVTTQIEHLRELMKKQK--- 55 usage_00410.pdb 1 -LEDLKSISPLFSSDVSQVFNFVNSVEQYTAMGGTAKSSVTTQIEHLRELMKK----- 52 usage_00671.pdb 1 SLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQA----- 53 usage_00672.pdb 1 SLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQA----- 53 usage_00716.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ- 57 usage_00717.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKE-- 56 usage_00718.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQA 58 usage_00719.pdb 1 SLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ- 57 L L ISP F DV V SVEQY A GTA SSV QI R L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################