################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:21 2021 # Report_file: c_1484_370.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01337.pdb # 2: usage_01338.pdb # 3: usage_01339.pdb # 4: usage_02208.pdb # 5: usage_02312.pdb # 6: usage_02369.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 61 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 61 ( 59.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01337.pdb 1 ---ALDFAGLKKYIMA------A--Y-VKNLDVNLDNEVNSTDLAILKKYLLG------- 41 usage_01338.pdb 1 ---ALDFAGLKKYIMA------A--Y-VKNLDVNLDNEVNSTDLAILKKYLLG------- 41 usage_01339.pdb 1 ---STDFAGLKKYIMA---ADHA--Y-VKNLDVNLDNEVNAFDLAILKKYLLG------- 44 usage_02208.pdb 1 ---QVIRAYVMSNYTD---H-----Q----------L--IETTNRAISLYMANLEHHHH- 36 usage_02312.pdb 1 ----TDAVALKRYVLRSGI-----SINTDNADLNEDGRVNSTDLGILKRYILK------- 44 usage_02369.pdb 1 PAIATTYGTLKKQLAQ---A---HPD-SID------K--Y---KDAFIKKIEKEALKKYW 42 lk y usage_01337.pdb - usage_01338.pdb - usage_01339.pdb - usage_02208.pdb - usage_02312.pdb - usage_02369.pdb 43 E 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################