################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:56:54 2021 # Report_file: c_0143_13.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00051.pdb # 2: usage_00062.pdb # 3: usage_00095.pdb # 4: usage_00096.pdb # 5: usage_00097.pdb # 6: usage_00119.pdb # 7: usage_00120.pdb # 8: usage_00128.pdb # 9: usage_00130.pdb # 10: usage_00131.pdb # 11: usage_00132.pdb # 12: usage_00136.pdb # 13: usage_00144.pdb # 14: usage_00192.pdb # 15: usage_00193.pdb # 16: usage_00213.pdb # 17: usage_00214.pdb # 18: usage_00215.pdb # 19: usage_00219.pdb # 20: usage_00237.pdb # 21: usage_00238.pdb # 22: usage_00239.pdb # 23: usage_00240.pdb # 24: usage_00241.pdb # 25: usage_00242.pdb # 26: usage_00267.pdb # 27: usage_00300.pdb # 28: usage_00359.pdb # 29: usage_00364.pdb # # Length: 114 # Identity: 46/114 ( 40.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/114 ( 61.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/114 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00062.pdb 1 --VMTQTPLSLSVTIGQPASISCKSSQSLLDSDGKTYLIWVFQRPGQSPKRLIFLVSKRD 58 usage_00095.pdb 1 -VQMTQTPLTLSVTIGQPASISCESSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00096.pdb 1 -VQMTQTPLTLSVTIGQPASISCESSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00097.pdb 1 --QMTQTPLSLSVTPGQPASISCKSSQSLLYSNGKTYLNWLLQKPGQSPKRLIYLVSKLD 58 usage_00119.pdb 1 -VVMTQTPLTLSVTIGQPASISCRSSQSLLYINGKTHLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00120.pdb 1 -VVMTQTPLTLSVTIGQPASISCRSSQSLLYINGKTHLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00128.pdb 1 -IVLTQSPASLAVSLGQPATISCGASKSVRT-SGYSYMDWNQQKPGQPPRRLIYLVSNLE 58 usage_00130.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00131.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00132.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00136.pdb 1 -VVMSQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSRLD 59 usage_00144.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00192.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 59 usage_00193.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 59 usage_00213.pdb 1 DVVMTQTPITLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 60 usage_00214.pdb 1 -VVMTQTPITLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00215.pdb 1 -VVMTQSPLSLPVTPGEPASISCKSSQSLLDSDGKTYLNWLLQKPGQSPQRLIYLVSKLD 59 usage_00219.pdb 1 -VVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00237.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLSWLLQRPGQSPKRLIYLVSKLD 59 usage_00238.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 59 usage_00239.pdb 1 --VMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 58 usage_00240.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 59 usage_00241.pdb 1 -IVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 59 usage_00242.pdb 1 -VVMTQSPSSLSVTIGQPASISCKSSQSLLDSDGGTYLNWLLQRPGQSPKRLIYLVSKLD 59 usage_00267.pdb 1 -LEMTQSPLTLSVTTGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKVD 59 usage_00300.pdb 1 -IVMTQTPLSLSVTPGQPASISCKSSQSLLESDGKTYLNWYLQKPGQSPQLLIYLVSILD 59 usage_00359.pdb 1 --VMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLD 58 usage_00364.pdb 1 --VMTQTPLSLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLA 58 mtQ P L Vt GqPAsISC sSqSll G t l W Q PGQsP rLI LVS usage_00051.pdb 60 SGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLEL--- 110 usage_00062.pdb 59 SGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCWQGTHFPHTVGGGTKLEI--- 109 usage_00095.pdb 60 SGVPDRFTGSGSGTDFTLRISRVEAEDLGVYYCVQGTHFPRTFGGGTKLEI--- 110 usage_00096.pdb 60 SGVPDRFTGSGSGTDFTLRISRVEAEDLGVYYCVQGTHFPRTFGGGTKLEI--- 110 usage_00097.pdb 59 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCVQGTHFPQTFGGGTKVEIKRT 112 usage_00119.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCLQSTHFPLTFGAGTKLELKRA 113 usage_00120.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCLQSTHFPLTFGAGTKLEL--- 110 usage_00128.pdb 59 SGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEI--- 109 usage_00130.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPLTFGAGTKLEL--- 110 usage_00131.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPLTFGAGTKLEL--- 110 usage_00132.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPLTFGAGTKLEL--- 110 usage_00136.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGIYFCWQGSHFPQTFGGGTKLEI--- 110 usage_00144.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGTHFPYTFGGGTKLEIKRA 113 usage_00192.pdb 60 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00193.pdb 60 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00213.pdb 61 SRVPDRFTGSGAGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTKLEI--- 111 usage_00214.pdb 60 SRVPDRFTGSGAGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTKLEIKRA 113 usage_00215.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCWQGTHFPRTFGQGTKVEI--- 110 usage_00219.pdb 60 SGVPDRFTGSGSGTDFTLKISRIEAEDLGLYYCWQGTHFPRTFGGGTKLEI--- 110 usage_00237.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAADLGLYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00238.pdb 60 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00239.pdb 59 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 109 usage_00240.pdb 60 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00241.pdb 60 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 110 usage_00242.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGAHFPYTFGGGTKLEI--- 110 usage_00267.pdb 60 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHSPLTFGAGTKLELKRA 113 usage_00300.pdb 60 SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQATHFPQTFGGGTKVEIKRT 113 usage_00359.pdb 59 SGVPDRITGSGSGTDFTLKISRVEAADLGVYYCVQGTHFPYTFGGGTKLEI--- 109 usage_00364.pdb 59 SGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPWTFGGYTKLEI--- 109 S vPdR GSG GTDFTL IsrvEa D g Y C q h P t G gTK E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################