################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:13 2021 # Report_file: c_1261_418.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01229.pdb # 2: usage_03212.pdb # 3: usage_03486.pdb # 4: usage_03487.pdb # 5: usage_03490.pdb # 6: usage_03601.pdb # 7: usage_04025.pdb # # Length: 59 # Identity: 0/ 59 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 59 ( 1.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 59 ( 61.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01229.pdb 1 --EAVYLI----TP--TEESVKCLMADF---QNPDNPQYR----------GAHIF-FTE 37 usage_03212.pdb 1 --NAQLMPHNWKTGITAAAARHFGIVCHISE---------------------YVEYLH- 35 usage_03486.pdb 1 -KAIAVLTS-G-GD--AQGMNAAVRAVV---R--------VGIFT-----GARVF-FVH 37 usage_03487.pdb 1 -KAIAVLTS-G-GD--AQGMNAAVRAVV---R--------VGIFT-----GARVF-FVH 37 usage_03490.pdb 1 GKAIAVLTS-G-GD--AQGMNAAVRAVV---R--------VGIFT-----GARVF-FVH 38 usage_03601.pdb 1 --AIGVLTS-G-GD--AQGMNAAVRAVV---R--------MGIYV-----GAKVY-FIY 36 usage_04025.pdb 1 -KSVGMIA----G---GT-GITPMLQVI---R--------AIMKDPDDHTVCHLL-FAN 38 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################