################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:07:13 2021 # Report_file: c_1207_139.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00021.pdb # 2: usage_00026.pdb # 3: usage_00070.pdb # 4: usage_00104.pdb # 5: usage_00106.pdb # 6: usage_00117.pdb # 7: usage_00337.pdb # 8: usage_00575.pdb # 9: usage_00750.pdb # 10: usage_00827.pdb # 11: usage_00840.pdb # 12: usage_00984.pdb # 13: usage_01043.pdb # 14: usage_01146.pdb # 15: usage_01221.pdb # 16: usage_01319.pdb # 17: usage_01397.pdb # 18: usage_01438.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 66 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/ 66 ( 90.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 A-VYYCARYDY------------Y-GSS-YFDYWGQG--------TTVTVS--------- 28 usage_00026.pdb 1 --VYYCARELL--MDYYD-----HIG-YSPGPTWGQG--------TLVTVS--------- 33 usage_00070.pdb 1 --VYYCARGIYF-Y---------G-T-T-YFDYWGQG--------TLVTVS--------- 28 usage_00104.pdb 1 --VYYCAQGPI------------V-G-A-PTDYWGKG--------TLVTVS--------- 26 usage_00106.pdb 1 --VYYCAKDGK------------S---G-LLDYWGQG--------TLVTVS--------- 25 usage_00117.pdb 1 --LYYCARYYR------------Y-E-A-WFASWGQG--------TLVTVS--------- 26 usage_00337.pdb 1 --TYYCARVSDF-----------G-D-Y-GPDFWGQG--------TLVSVT--------- 27 usage_00575.pdb 1 A-VYFCAREGG----------------ARGFDYWGQG--------TLVTVS--------- 26 usage_00750.pdb 1 G-VYYCARGRY--D------Y--W-S-G-YLSPWGQG--------TLVTVS--------- 29 usage_00827.pdb 1 A-LYYCAKDSP------------R-G-ELPFDYWGQG--------TLVTVS--------- 28 usage_00840.pdb 1 A-MYYCARHEDG-----------N-W-N-YFDYWGQG--------TTLTV---------- 27 usage_00984.pdb 1 -SV------------------------Y-YVSDAKYV--------VNNGH-TIKVVMGGR 25 usage_01043.pdb 1 G-LYICKVELMY-P---------P---P-YYLGIGNG--------TQIYVI--------- 28 usage_01146.pdb 1 ---DFWFCES--------------------CQEYFVDECPNHGPPVFVSDT--------- 28 usage_01221.pdb 1 A-VYYCAAKWRPLR--YS-DYP-S-N-S-DYYDWGQ------------------------ 28 usage_01319.pdb 1 A-MYYCVRDG-----------------N-SMDYWGQG--------TSVTV---------- 23 usage_01397.pdb 1 A-MYYCAYHRRG-H--FYGSGSA--W-D-WFESWGQG--------TLVTVS--------- 35 usage_01438.pdb 1 --VYYCAREYYR-----------W-Y-T-AIDYWGQG--------TLVTV---------- 26 usage_00021.pdb ------ usage_00026.pdb ------ usage_00070.pdb ------ usage_00104.pdb ------ usage_00106.pdb ------ usage_00117.pdb ------ usage_00337.pdb ------ usage_00575.pdb ------ usage_00750.pdb ------ usage_00827.pdb ------ usage_00840.pdb ------ usage_00984.pdb 26 GYVVVD 31 usage_01043.pdb 29 -----D 29 usage_01146.pdb ------ usage_01221.pdb ------ usage_01319.pdb ------ usage_01397.pdb ------ usage_01438.pdb ------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################