################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:38 2021 # Report_file: c_0007_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00014.pdb # # Length: 246 # Identity: 146/246 ( 59.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 147/246 ( 59.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/246 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --DVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAK 58 usage_00004.pdb 1 QVTVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAE 60 usage_00005.pdb 1 QVTVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAE 60 usage_00006.pdb 1 --TVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAE 58 usage_00007.pdb 1 QVTVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAE 60 usage_00008.pdb 1 --TVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAE 58 usage_00014.pdb 1 --DVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAK 58 V IGA I GV DL ATV AI AAL HKVIFF GQ HLDD Q FA usage_00001.pdb 59 LLGEPVLLQL---RANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELPE 115 usage_00004.pdb 61 LLGTPT-----V--ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPA 113 usage_00005.pdb 61 LLGTPT--------ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPA 112 usage_00006.pdb 59 LLGTPT-----V--ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPA 111 usage_00007.pdb 61 LLGTPT--------ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPA 112 usage_00008.pdb 59 LLGTPT--------ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPA 110 usage_00014.pdb 59 LLGEP-----VAHRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELPE 113 LLG P ANSWHTDVTFV PKAS LR V P GG T WA T AAYQ LP usage_00001.pdb 116 PLRELADKLWAVHSNE--YETEHPVVRVHPISGERALQLGHFVKRIKGYSLADSQHLFAV 173 usage_00004.pdb 114 PLRTLADNLWAVHTNRDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRL 173 usage_00005.pdb 113 PLRTLADNLWAVHTNRDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRL 172 usage_00006.pdb 112 PLRTLADNLWAVHTNRDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRL 171 usage_00007.pdb 113 PLRTLADNLWAVHTNRDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRL 172 usage_00008.pdb 111 PLRTLADNLWAVHTNRDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRL 170 usage_00014.pdb 114 PLRELADKLWAVHSNR--YETEHPVVRVHPISGERALQLGHFVKRIKGYSLADSQHLFAV 171 PLR LAD LWAVH Nr YE EHPVVRVHP GER L LGHFVK G S LF usage_00001.pdb 174 LQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAGEVPVGVDGQ 233 usage_00004.pdb 174 FQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGE 233 usage_00005.pdb 173 FQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGE 232 usage_00006.pdb 172 FQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGE 231 usage_00007.pdb 173 FQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGE 232 usage_00008.pdb 171 FQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGE 230 usage_00014.pdb 172 LQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAGEVPVGVDGQ 231 Q TRLENTVRW W GD AIWDNRATQHYAV DY Q R RVTLAG PV V G usage_00001.pdb 234 LSRTTR 239 usage_00004.pdb 234 RSRVIA 239 usage_00005.pdb 233 RSRVIA 238 usage_00006.pdb 232 RSRVIA 237 usage_00007.pdb 233 RSRVIA 238 usage_00008.pdb 231 RSRVIA 236 usage_00014.pdb 232 LSRTTR 237 SR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################