################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:06 2021 # Report_file: c_1413_119.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00374.pdb # 2: usage_00393.pdb # 3: usage_00733.pdb # 4: usage_01039.pdb # 5: usage_01099.pdb # # Length: 79 # Identity: 42/ 79 ( 53.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 79 ( 68.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 79 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00374.pdb 1 SDE--EMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLL 58 usage_00393.pdb 1 ---SDEESLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI-KNHPNEASIFTKLLL 56 usage_00733.pdb 1 -DE--EMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLL 57 usage_01039.pdb 1 -EE--ELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLL 57 usage_01099.pdb 1 ----DEESLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI-KNHPNEASIFTKLLL 55 E sLFTAVVLVSADRSGiENvnSVEaLQETLiRALRtLi KNhPnEaSiFTKLLL usage_00374.pdb 59 K------------------ 59 usage_00393.pdb 57 KLPDLRSLNN--------- 66 usage_00733.pdb 58 KLPDLRSLNNMHSEELLAF 76 usage_01039.pdb 58 KLPDLRTLNNMHS------ 70 usage_01099.pdb 56 KLPDLRSLNN--------- 65 K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################