################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:50 2021 # Report_file: c_1242_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00222.pdb # 2: usage_00983.pdb # 3: usage_01493.pdb # 4: usage_01535.pdb # 5: usage_02182.pdb # 6: usage_02183.pdb # 7: usage_02242.pdb # # Length: 61 # Identity: 1/ 61 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 61 ( 62.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00222.pdb 1 -VYVAL---KEVK--LDSEEGTPSTA------IR-EISLMKELK-HENIVRLYDVIH--T 44 usage_00983.pdb 1 GELVAI---KKVL--QD---------KRFK--NR-ELQIMRKLD-HCNIVRLRYFFY--S 40 usage_01493.pdb 1 -QTPEM---FVFHTFED---------DLVP--LSHPLYIVEELSK-A-NIPVE-FHLFK- 41 usage_01535.pdb 1 -ELVAI---KKVL--QD---------KRFK--NR-ELQIMRKLD-HCNIVRLRYFFY--- 38 usage_02182.pdb 1 -ELVAI---KKVL--QD---------KRFK--NR-ELQIMRKLD-HCNIVRLRYFFY--S 39 usage_02183.pdb 1 -ELVAI---KKVL--QD---------KRFK--NR-ELQIMRKLD-HCNIVRLRYFFY--- 38 usage_02242.pdb 1 ------KLNLEDN--G--------------SLRE-HIDLLRALT-HGDFK--NAYFY--D 32 L usage_00222.pdb - usage_00983.pdb - usage_01493.pdb - usage_01535.pdb - usage_02182.pdb - usage_02183.pdb - usage_02242.pdb 33 E 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################