################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:52:47 2021 # Report_file: c_0886_14.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00018.pdb # 4: usage_00039.pdb # 5: usage_00043.pdb # 6: usage_00116.pdb # 7: usage_00117.pdb # 8: usage_00119.pdb # 9: usage_00120.pdb # 10: usage_00177.pdb # 11: usage_00279.pdb # 12: usage_00280.pdb # 13: usage_00281.pdb # 14: usage_00355.pdb # 15: usage_00385.pdb # 16: usage_00550.pdb # 17: usage_00643.pdb # # Length: 112 # Identity: 49/112 ( 43.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/112 ( 88.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/112 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---EPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 57 usage_00002.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00018.pdb 1 ---EPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 57 usage_00039.pdb 1 ---EPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 57 usage_00043.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00116.pdb 1 -----MLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 55 usage_00117.pdb 1 -----MLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 55 usage_00119.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00120.pdb 1 ---EPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 57 usage_00177.pdb 1 -----MLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 55 usage_00279.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00280.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00281.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00355.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00385.pdb 1 EFLELLFHFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYI 60 usage_00550.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 usage_00643.pdb 1 ----PMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYI 56 mlkFHymLkKLQLhEeEYVLmqAisLFSPDRPGVlQhrvvDQLQEqfAiTLkSYI usage_00001.pdb 58 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 108 usage_00002.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00018.pdb 58 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 108 usage_00039.pdb 58 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 108 usage_00043.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00116.pdb 56 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 107 usage_00117.pdb 56 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 107 usage_00119.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00120.pdb 58 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 109 usage_00177.pdb 56 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 107 usage_00279.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 107 usage_00280.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 107 usage_00281.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00355.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00385.pdb 61 KGQQRRPRDRFLYAKLLGLLAELRSINEAYGYQIQHIQ-------GLSAMMP 105 usage_00550.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELF 108 usage_00643.pdb 57 ECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQEL- 107 ecnrpqPahRFLflKimamLtELRSINaqhtqrllrIQ pLmqel #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################