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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 22:55:46 2021
# Report_file: c_0039_28.html
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#====================================
# Aligned_structures: 3
#   1: usage_00020.pdb
#   2: usage_00030.pdb
#   3: usage_00031.pdb
#
# Length:        251
# Identity:       57/251 ( 22.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    225/251 ( 89.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           26/251 ( 10.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00020.pdb         1  --LLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFF   58
usage_00030.pdb         1  NDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFY   60
usage_00031.pdb         1  NDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFY   60
                             eflaAiAhwfstqhytaidsqtvvygPsViymvselIrqwsetgegVvihTPAYdaFy

usage_00020.pdb        59  HLLSATQREGIFIDATG-----GINLHDVEKGFQAG-ARSILLCNPYNPLG-VFAPEWLN  111
usage_00030.pdb        61  KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE  120
usage_00031.pdb        61  KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE  120
                           kaiegnQRtvmpvalek     fcdmgklEavlakp ckimLLCsPqNPtG VwtcdeLe

usage_00020.pdb       112  ELCDLAHRYDARVLVDEIHAPLVFD-GQHTVAAGVSDTA-ASVCITITAPS-AWNIAGLK  168
usage_00030.pdb       121  IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV----ARGDWALLTSGSKSFNIPALT  176
usage_00031.pdb       121  IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV----ARGDWALLTSGSKSFNIPALT  176
                           imaDLceRhgvRVisDEIHmdmVwg qpHipwsnV     rgdwallTsgS sfNIpaLt

usage_00020.pdb       169  CAQIIFSNPSDAEHWQQLSPV---IK-DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNH  224
usage_00030.pdb       177  GAYGIIENSSSRDAYLSAL--KGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNL  234
usage_00031.pdb       177  GAYGIIENSSSRDAYLSAL--KGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNL  234
                           gAygIieNsSsrdaylsal     dg sspSvLaLtAhiAAYqqGapwLdalriYLKdNl

usage_00020.pdb       225  DFLLHEI----  231
usage_00030.pdb       235  TYIADKMNAAF  245
usage_00031.pdb       235  TYIADKMNAAF  245
                           tyiadkm    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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