################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:55 2021 # Report_file: c_0395_68.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00056.pdb # 2: usage_00079.pdb # 3: usage_00586.pdb # # Length: 85 # Identity: 14/ 85 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 85 ( 72.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 85 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 AAYEHPSHDLIFIFRGRKFWALNG----YDILEGYPKKISELGLPKEVKKISAAVHFED- 55 usage_00079.pdb 1 AAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWT-ELPWP--------HEKVDGALCMEKP 51 usage_00586.pdb 1 AAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWT-ELPWP--------HEKVDGALCMEKP 51 AAfvcPgssrlhImaGRrlWwLdl qatwt elpwp heKvdgAlcmEk usage_00056.pdb 56 --------T-GKTLLFSGNQVWRYD 71 usage_00079.pdb 52 LGPNSCSTSGPNLYLIHGPNLYCYR 76 usage_00586.pdb 52 LGPNSCSTSGPNLYLIHGPNLYCYR 76 s pnlyLihGpnlycYr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################