################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:14 2021 # Report_file: c_1332_49.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00200.pdb # 2: usage_00239.pdb # 3: usage_00240.pdb # 4: usage_00241.pdb # 5: usage_00480.pdb # 6: usage_00481.pdb # 7: usage_00482.pdb # 8: usage_00483.pdb # 9: usage_00484.pdb # 10: usage_00485.pdb # 11: usage_00486.pdb # 12: usage_00487.pdb # 13: usage_00488.pdb # 14: usage_00489.pdb # 15: usage_00496.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 43 ( 18.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 43 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00200.pdb 1 -RERLRETLVKEAKVPTSRYMYAT---TLDELYEACEKIG--- 36 usage_00239.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00240.pdb 1 ----IRRLAAEELQLPTSTYRFAD---SESLFREAVADI---- 32 usage_00241.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00480.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00481.pdb 1 ----IRRLAAEELQLPTSTYRFAD---SESLFREAVADIG--- 33 usage_00482.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00483.pdb 1 NREGIRRLAAEELQLPTSTYRFAD---SESLFREAVADIG--- 37 usage_00484.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00485.pdb 1 ----IRRLAAEELQLPTSTYRFAD---SESLFREAVADI---- 32 usage_00486.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 34 usage_00487.pdb 1 -REGIRRLAAEELQLPTSTYRFAD---SESLFREAVADI---- 35 usage_00488.pdb 1 ----IRRLAAEELQLPTSTYRFAD---SESLFREAVAD----- 31 usage_00489.pdb 1 ----IRRLAAEELQLPTSTYRFAD---SESLFREAVADI---- 32 usage_00496.pdb 1 --KEQVQSMG-----AEFLELD--SDAFIKAEMELFAAQAKEV 34 r pts y Ea a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################