################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:51 2021 # Report_file: c_1369_74.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00951.pdb # 2: usage_01016.pdb # 3: usage_01017.pdb # 4: usage_01018.pdb # 5: usage_01019.pdb # 6: usage_01020.pdb # 7: usage_01029.pdb # 8: usage_01361.pdb # # Length: 106 # Identity: 29/106 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/106 ( 27.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/106 ( 52.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00951.pdb 1 ---------THLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNER-------- 43 usage_01016.pdb 1 IASQ-----TTFFDLALQDNDEKLFHLAREVENG---RIARSL-KLLTILER-------- 43 usage_01017.pdb 1 IASQ-----TTFFDLALQDNDEKLFHLAREVENG---RIARSL-KLLTILERG------- 44 usage_01018.pdb 1 ----IAS----QTTFFDLALQDNDEKLFHLAREVENGRIARSL-KLLTILERGDV----P 47 usage_01019.pdb 1 -----------------------------------NGRIARSLMKLLTILERG------- 18 usage_01020.pdb 1 -----------------------------------NGRIARSLMKLLTILERG------- 18 usage_01029.pdb 1 -------------------------------------RIARSLMKLLTILERGD-YDGVP 22 usage_01361.pdb 1 -------ITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGD-S---H 49 RIAR KL ER usage_00951.pdb 44 ---E-TGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDAS 85 usage_01016.pdb 44 -------DRYQLKLFRDYVFHRVDADGKPNLSIGHLTCSK--LEA- 79 usage_01017.pdb 45 -------DRYQLKLFRDYVFHRVDADGKPNLSIGHLTCSK--LEA- 80 usage_01018.pdb 48 -SWSETGDRYQLKLFRDYVFHRVDADGKPNLSIGHLTCSK--LEA- 89 usage_01019.pdb 19 -------DRYQLKLFRDYVFHRVDADGKPNLSIGHMLTCMSKLEAG 57 usage_01020.pdb 19 ------GDRYQLKLFRDYVFHRVDADGKPNLSIGHMLTCMSKLEA- 57 usage_01029.pdb 23 -SWSETGDRYQLKLFRDYVFHRVDADGKPNLSIGHMLTCMSKLEAG 67 usage_01361.pdb 50 NWSE-TGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDAS 94 R LKLFRDYVFH VDADGK L H L A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################