################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:54 2021 # Report_file: c_1140_3.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00074.pdb # 5: usage_00075.pdb # 6: usage_00412.pdb # 7: usage_00413.pdb # 8: usage_00608.pdb # 9: usage_00641.pdb # 10: usage_00655.pdb # 11: usage_00656.pdb # # Length: 109 # Identity: 12/109 ( 11.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/109 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/109 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 --KKVAKETAITLQSYLTYQAVRLISQALSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 58 usage_00044.pdb 1 --KKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 58 usage_00045.pdb 1 -FKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 59 usage_00074.pdb 1 -TKHIAQATVKVLQSYLTYQAVLRIQSELGETNPPQAIWLNQYLASHSIQNGETFLTELL 59 usage_00075.pdb 1 --KHIAQATVKVLQSYLTYQAVLRIQSELGETNPPQAIWLNQYLASHSIQNGETFLTELL 58 usage_00412.pdb 1 -FKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 59 usage_00413.pdb 1 -FKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 59 usage_00608.pdb 1 DVKHIAKQTTKTLISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALF 60 usage_00641.pdb 1 -----FGDVQKQIVNYFTYKAVRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALG 55 usage_00655.pdb 1 ---KVAKETAITLQSALTLQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 57 usage_00656.pdb 1 ---KVAKETAITLQSALTLQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMM 57 a t l s lT qAV L EtnP q Wl iq L usage_00043.pdb 59 LENKELVLRILTVRENLAEG----------------------------- 78 usage_00044.pdb 59 LENKELVLRILTVRENLAEG----------------------------- 78 usage_00045.pdb 60 LENKELVLRILTVRENLAEG----------------------------- 79 usage_00074.pdb 60 DENKELVLRILAVREDIAESVLDFLP----------------------- 85 usage_00075.pdb 59 DENKELVLRILAVREDIAESV---------------------------- 79 usage_00412.pdb 60 LENKELVLRILTVRENLAEG----------------------------- 79 usage_00413.pdb 60 LENKELVLRILTVRENLAEG----------------------------- 79 usage_00608.pdb 61 REQPDLGFRILTVREHLAEMV---------------------------- 81 usage_00641.pdb 56 KESQELAERVMITRLHLYGKWIKK------------------------- 79 usage_00655.pdb 58 LENKELVLRILTVRENLAEG----------------------------- 77 usage_00656.pdb 58 LENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLT 106 E eL Ril vRe ae #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################