################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:40:03 2021 # Report_file: c_1218_118.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00004.pdb # 2: usage_00047.pdb # 3: usage_00225.pdb # 4: usage_00226.pdb # 5: usage_00227.pdb # 6: usage_00228.pdb # 7: usage_00229.pdb # 8: usage_00240.pdb # 9: usage_00306.pdb # 10: usage_00307.pdb # 11: usage_00460.pdb # 12: usage_00488.pdb # 13: usage_00512.pdb # 14: usage_00581.pdb # 15: usage_00609.pdb # 16: usage_00615.pdb # 17: usage_00715.pdb # 18: usage_00735.pdb # 19: usage_00736.pdb # 20: usage_00744.pdb # 21: usage_00745.pdb # 22: usage_00746.pdb # 23: usage_00793.pdb # 24: usage_00817.pdb # 25: usage_00885.pdb # 26: usage_00896.pdb # 27: usage_00903.pdb # # Length: 57 # Identity: 9/ 57 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 57 ( 29.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 57 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 LAVNEDCELKILDF-GL---VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00047.pdb 1 LAVNED-ELKILDF-GLAY-VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 52 usage_00225.pdb 1 LAVNEDCELKILDF-GLA--VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 52 usage_00226.pdb 1 LAVNEDCELKILDF-GLA---ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 52 usage_00227.pdb 1 LAVNEDCELKILDF-GLA---ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00228.pdb 1 LAVNEDCELKILDF-GLA---ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00229.pdb 1 LAVNEDCELKILDF-GL---VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00240.pdb 1 LAVNEDCELKILD--------ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 47 usage_00306.pdb 1 LAVNEDSELKILDF-GL---VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 52 usage_00307.pdb 1 LAVNEDSELKILDF-GL----ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 50 usage_00460.pdb 1 LAVNEDCELKILDF-GL-----TRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 49 usage_00488.pdb 1 LAVNEDCELKILDF-------ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 49 usage_00512.pdb 1 LAVNEDCELKILDF-----GVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 50 usage_00581.pdb 1 LAVNEDSELKILDF-----G-ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 50 usage_00609.pdb 1 IFIDESRNVKIGDFG----L-GTAMYVATEVL----HY-NEKIDMYSLGIIFFEMI- 46 usage_00615.pdb 1 LAVNEDCELKILDF-GLA---ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00715.pdb 1 LAVNEDCELKILDF-----G-ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 50 usage_00735.pdb 1 LAVNEDCELKILDF---------RWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 46 usage_00736.pdb 1 LAVNEDCELKILDF--------TRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 47 usage_00744.pdb 1 LAVNEDCELKILD--------ATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLT 48 usage_00745.pdb 1 LAVNEDCELKILDF-GL---VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00746.pdb 1 LAVNEDCELKILDF-GL---VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 51 usage_00793.pdb 1 VFLDGKQNVKLGD---------TPYYMSPEQM------NNEKSDIWSLGCLLYELC- 41 usage_00817.pdb 1 LAVNEDCELKILDF-----GVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 50 usage_00885.pdb 1 LAVNEDCELKILDF-------VTRWYRAPEVILSWMHY-NQTVDIWSVGCIMAEMLT 49 usage_00896.pdb 1 LAVNEDCELKILDF-GLA--VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELL- 52 usage_00903.pdb 1 LAVNEDCELKILDF-------ATRWYRAPEIMLNAMHY-NQTVDIWSVGCIMAELL- 48 e Ki D Y apE N DiwS Gci E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################