################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:42 2021 # Report_file: c_1117_104.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00107.pdb # 2: usage_00272.pdb # 3: usage_00275.pdb # # Length: 97 # Identity: 20/ 97 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 97 ( 69.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 97 ( 16.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00107.pdb 1 -RPLLTKLVIADVIMIVGGYIGESSINIAGGFTQLGLWSYLIGCFAWIYIIYLLFTN-VT 58 usage_00272.pdb 1 -TSVAASLFKKLLAGSLV-LGAGFAGEAG-LA--PVLPAFIIGA-GWL-YIYELYGE-GK 52 usage_00275.pdb 1 AASLFKKLLAGSLVMLG----AGFAGEAG-LA--PVLPAFIIGMAGWLYMIYELYMGEGK 53 sl kL l m agfageag la pvLpafiIG gWl IYeLy gk usage_00107.pdb 59 KAAENKPAPIRDALLKMRLFILIGWAIYPIGYAVTLF 95 usage_00272.pdb 53 AAVSTASPAVNSAYNA---IIVVGWAIYPAGYAAG-- 84 usage_00275.pdb 54 AAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAG-- 88 aAvstaspavnsAyna iIvvGWAIYPaGYAag #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################