################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:54 2021 # Report_file: c_0592_81.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00047.pdb # 2: usage_00122.pdb # 3: usage_00123.pdb # 4: usage_00162.pdb # 5: usage_00282.pdb # 6: usage_00489.pdb # # Length: 70 # Identity: 9/ 70 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 70 ( 34.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 70 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 ---KVVTATNFLGTLEQLAGQFAKQTG-HAVVISSGSSGPVYAQIV-NGAPYNVFFSADE 55 usage_00122.pdb 1 -KITVFAAASLTNAMQDIATQFKKEKG-VDVVSSFASSSTLARQIE-AGAPADLFISADQ 57 usage_00123.pdb 1 -KITVFAAASLTNAMQDIATQFKKEKG-VDVVSSFASSSTLARQIE-AGAPADLFISADQ 57 usage_00162.pdb 1 ---TVFAAASLKESMDEAATAYEKATG-TPVRVSYAASSALARQIE-QGAPADVFLSADL 55 usage_00282.pdb 1 --VTVFAAASLKESMDEAATAYEKATG-TPVRVSYAASSALARQIE-QGAPADVFLSADL 56 usage_00489.pdb 1 IVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVRKIIDLGKKADILASADY 60 vf A sl a K g V s a S rqI Gapad f SAD usage_00047.pdb 56 KSPEKLDNQ- 64 usage_00122.pdb 58 KWMDYAVDK- 66 usage_00123.pdb 58 KWMDYAVDK- 66 usage_00162.pdb 56 EWMDYLQQHG 65 usage_00282.pdb 57 EWMDYLQQHG 66 usage_00489.pdb 61 SLIPQM-M-- 67 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################