################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:43 2021 # Report_file: c_0886_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00135.pdb # 2: usage_00136.pdb # 3: usage_00144.pdb # 4: usage_00145.pdb # 5: usage_00227.pdb # 6: usage_00591.pdb # 7: usage_00592.pdb # 8: usage_00654.pdb # 9: usage_00681.pdb # # Length: 113 # Identity: 85/113 ( 75.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/113 ( 77.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/113 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00135.pdb 1 ----DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 56 usage_00136.pdb 1 GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 60 usage_00144.pdb 1 --LTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIY 58 usage_00145.pdb 1 ----DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 56 usage_00227.pdb 1 --LTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 58 usage_00591.pdb 1 -----LVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVY 55 usage_00592.pdb 1 ---TDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVY 57 usage_00654.pdb 1 ---TDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 57 usage_00681.pdb 1 ---TDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY 57 LVFaFA QLLPLEMDD ETGLLSAICLICGDR DLE P VD LQEPLLEAL Y usage_00135.pdb 57 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 109 usage_00136.pdb 61 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 113 usage_00144.pdb 59 IRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMM- 110 usage_00145.pdb 57 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 109 usage_00227.pdb 59 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 111 usage_00591.pdb 56 VRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML- 107 usage_00592.pdb 58 VRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML- 109 usage_00654.pdb 58 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 110 usage_00681.pdb 58 ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE 110 R RRPS P MFP mLMKITDLR IS KGAER ITLKMEIPG MPPLI EMl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################