################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:40 2021 # Report_file: c_1200_165.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00863.pdb # 2: usage_03991.pdb # 3: usage_04215.pdb # 4: usage_05178.pdb # 5: usage_05179.pdb # 6: usage_05180.pdb # 7: usage_05266.pdb # 8: usage_05267.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 51 ( 3.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 51 ( 72.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00863.pdb 1 ------RQYQA-IRLDNGMVVLLVSDPQ----AVKSLSALVVP-------- 32 usage_03991.pdb 1 GVVITQFHTGQ-ID--NKPYFCIEGKQS---AG-S--------SISACSMK 36 usage_04215.pdb 1 ----FGITLGDRDS--EGNRPAYYLAGS----A----------IKVYSVN- 30 usage_05178.pdb 1 GVVITQFHTGQ-ID--NKPYFCIEGKQ----------------SISACSMK 32 usage_05179.pdb 1 ----TQFHTGQ-ID--N--KPYFCIE-----------------SACSMK-- 23 usage_05180.pdb 1 ----TQFHTGQ-ID----NKPYFCIEGKQGSS--I--------SACSMK-- 30 usage_05266.pdb 1 GVVITQFHTGQ-ID--NKPYFCIEGKQS---AG-S--------SISACSMK 36 usage_05267.pdb 1 GVVITQFHTGQ-ID--NKPYFCIEGKQS---AG-S--------SISACSMK 36 g i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################