################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:58 2021 # Report_file: c_0840_59.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00141.pdb # 4: usage_00185.pdb # 5: usage_00677.pdb # 6: usage_00678.pdb # 7: usage_01175.pdb # 8: usage_01176.pdb # # Length: 62 # Identity: 8/ 62 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 62 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 62 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -LEEISKLKPDLIIADSSRHKGINKELNKI-APTLSLKSFDGDYK---QNINSFKTIAKA 55 usage_00036.pdb 1 -LEEISKLKPDLIIADSSRHKGINKELNKI-APTLSLKSFDGDYK---QNINSFKTIAKA 55 usage_00141.pdb 1 -VELLKKLSPDLVVTFV-GNPKAVEHAKKFGISFLSFQ-----EKTIAEVMEDIDTQAKA 53 usage_00185.pdb 1 -VETIASLKPDLIIGNKMRHEKVYEQLKAI-APTVFSET----LR-G-EWKDNFKFYAKA 52 usage_00677.pdb 1 -LEEISKLKPDLIIADSSRHKGINKELNKI-APTLSLKSFDGDYK---QNINSFKTIAKA 55 usage_00678.pdb 1 NLEEISKLKPDLIIADSSRHKGINKELNKI-APTLSLKSFDGDYK---QNINSFKTIAKA 56 usage_01175.pdb 1 -LEEISKLKPDLIVASKVRNEKVYDQLSKI-APTVSTDT----VF----KFKDTTKLGKA 50 usage_01176.pdb 1 -LEEISKLKPDLIVASKVRNEKVYDQLSKI-APTVSTDT----VF----KFKDTTKLGKA 50 E i kLkPDLi r l ki apt s KA usage_00035.pdb 56 LN 57 usage_00036.pdb 56 LN 57 usage_00141.pdb 54 LE 55 usage_00185.pdb 53 LN 54 usage_00677.pdb 56 LN 57 usage_00678.pdb 57 LN 58 usage_01175.pdb 51 LG 52 usage_01176.pdb 51 LG 52 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################