################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:00 2021 # Report_file: c_1066_31.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00094.pdb # 2: usage_00117.pdb # 3: usage_00118.pdb # 4: usage_00238.pdb # 5: usage_00239.pdb # 6: usage_00248.pdb # 7: usage_00249.pdb # 8: usage_00294.pdb # 9: usage_00402.pdb # 10: usage_00532.pdb # 11: usage_00533.pdb # # Length: 50 # Identity: 6/ 50 ( 12.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 50 ( 14.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 50 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 GNTELIYGAGTMK-EEQVMGG--ENNYSLASHHIFGITGSSQMLFSPLER 47 usage_00117.pdb 1 SEDILQKGAGLLE-GASLPVGGENTHTVITAHRG--LPTA--ELFSQLDK 45 usage_00118.pdb 1 SEDILQKGAGLLE-GASLPVGGENTHTVITAHRG--LPTA--ELFSQLDK 45 usage_00238.pdb 1 AEEVLQQGAGHLE-GTSLPIGGNSTHAVITAHTG--LPTA--KMFTDLTK 45 usage_00239.pdb 1 AEEVLQQGAGHLE-GTSLPIGGNSTHAVITAHTG--LPTA--KMFTDLTK 45 usage_00248.pdb 1 AEEVLQQGAGHLE-GTSLPIGGNSTHAVITADTG--LPTA--KMFTDLTK 45 usage_00249.pdb 1 AEEVLQQGAGHLE-GTSLPIGGNSTHAVITADTG--LPTA--KMFTDLTK 45 usage_00294.pdb 1 DNVNLFYGAGTMKRE-QVMGE---GNYSLASHHIFGVDNANKMLFSPLDN 46 usage_00402.pdb 1 SQEVLSKGAGHLE-GTSLPIGGNSTHTVITAHSG--IPDK--ELFSNLKK 45 usage_00532.pdb 1 SEDILQKGAGLLE-GASLPVGGENTHTVITAHRG--LPTA--ELFSQLDK 45 usage_00533.pdb 1 SEDILQKGAGLLE-GASLPVGGENTHTVITAHRG--LPTA--ELFSQLDK 45 L GAG g F L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################