################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:34 2021 # Report_file: c_1015_64.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00084.pdb # 2: usage_00154.pdb # 3: usage_00217.pdb # 4: usage_00282.pdb # 5: usage_00548.pdb # # Length: 80 # Identity: 6/ 80 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 80 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 80 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 PVHFLVIPKKPIPRISQAEEE-DQQLLGHLLLVAKQTAKAEG----LGDGYRLVI-NDGK 54 usage_00154.pdb 1 --HVLVSPKRVVPRLT-D---LTDAETADLFIVAKKVQAMLEKHHNVT-ST-TICVQDGK 52 usage_00217.pdb 1 --HVLVCPLRPVERFH-D---LRPDEVADLFQTTQRVGTVVEKHFHGT-SL-TFS-QDGP 51 usage_00282.pdb 1 --ETLLLPKAHVLRIT-D---LTDAQRSDLALALKKLTSRYDNLFQCSFPY-SMGWHGAP 53 usage_00548.pdb 1 --HVLVCPLRPVERFH-D---LRPDEVADLFQTTQRVGTVVEKHFHGT-SL-TFS-QDGP 51 h Lv P v R d dL dg usage_00084.pdb 55 --LGAQSVYHLHIHVLG--- 69 usage_00154.pdb 53 --DAGQTVPHVHIHILPRRA 70 usage_00217.pdb 52 --EAGQTVKHVHVHVLPRKA 69 usage_00282.pdb 54 FNGEENQHWQLHAHFYPP-- 71 usage_00548.pdb 52 --EAGQTVKHVHVHVLP--- 66 q v h H H lp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################