################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:23 2021 # Report_file: c_0827_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00236.pdb # 2: usage_00237.pdb # 3: usage_00300.pdb # 4: usage_00301.pdb # 5: usage_00302.pdb # 6: usage_00303.pdb # 7: usage_00304.pdb # # Length: 108 # Identity: 47/108 ( 43.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/108 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/108 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00236.pdb 1 --------------DAIDVTPVKAALSALGAEAGEATIVLAKAEPSRSGRIRGKRHT-LD 45 usage_00237.pdb 1 -------------------TPVKAALSALGAEAGEATIVLAKAEPSRSGRIRGKRHT-LD 40 usage_00300.pdb 1 ASVRRTIESLGIRS---D-DEMDRI-----------VNVFAKAEASPDGVVRGMRHTMLS 45 usage_00301.pdb 1 -------------S---D-DEMDRI-----------VNVFAKAEASPDGVVRGMRHTMLS 32 usage_00302.pdb 1 -------------S---D-DEMDRI-----------VNVFAKAEASPDGVVRGMRHTMLS 32 usage_00303.pdb 1 -------------S---D-DEMDRI-----------VNVFAKAEASPDGVVRGMRHTMLS 32 usage_00304.pdb 1 -------------S---D-DEMDRI-----------VNVFAKAEASPDGVVRGMRHTMLS 32 V AKAE S G RG RHT L usage_00236.pdb 46 DSDISPTRHARAFVAGALAGVVGHTEIYVSGGGEHQGPDGGGPVAVIA 93 usage_00237.pdb 41 DSDISPTRHARAFVAGALAGVVGHTEIYVSGGGEHQGPDGGGPVAVIA 88 usage_00300.pdb 46 DSDINSTRHARAVTGAAIASVVGHGMVYVSGGAEHQGPAGGGPFAVIA 93 usage_00301.pdb 33 DSDINSTRHARAVTGAAIASVVGHGMVYVSGGAEHQGPAGGGPFAVIA 80 usage_00302.pdb 33 DSDINSTRHARAVTGAAIASVVGHGMVYVSGGAEHQGPAGGGPFAVIA 80 usage_00303.pdb 33 DSDINSTRHARAVTGAAIASVVGHGMVYVSGGAEHQGPAGGGPFAVIA 80 usage_00304.pdb 33 DSDINSTRHARAVTGAAIASVVGHGMVYVSGGAEHQGPAGGGPFAVIA 80 DSDI TRHARA A A VVGH YVSGG EHQGP GGGP AVIA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################