################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:21 2021 # Report_file: c_0300_50.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00110.pdb # 2: usage_00111.pdb # 3: usage_00112.pdb # 4: usage_00116.pdb # 5: usage_00117.pdb # 6: usage_00118.pdb # 7: usage_00119.pdb # 8: usage_00127.pdb # 9: usage_00251.pdb # 10: usage_00252.pdb # 11: usage_00253.pdb # 12: usage_00254.pdb # # Length: 151 # Identity: 59/151 ( 39.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/151 ( 69.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/151 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00110.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00111.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00112.pdb 1 -VAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 59 usage_00116.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00117.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00118.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00119.pdb 1 LVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKE 60 usage_00127.pdb 1 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDI--RG-EDVVADLGDRARFAAADVTDEAA 57 usage_00251.pdb 1 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKD 60 usage_00252.pdb 1 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKD 60 usage_00253.pdb 1 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKD 60 usage_00254.pdb 1 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKD 60 VAViTGGASGLGL Ta RLvgqGA aVlLD s E akkLG nc FApA VTsEk usage_00110.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00111.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00112.pdb 60 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 115 usage_00116.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00117.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00118.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00119.pdb 61 VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH----TLEDFQRVINVNLIGTF 116 usage_00127.pdb 58 VASALDLAETMGT-LRIVVNCAGTG--------------NAIRSLAAFRKIVDINLVGSF 102 usage_00251.pdb 61 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTH----TLEDFQRVLDVNLMGTF 116 usage_00252.pdb 61 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTH----TLEDFQRVLDVNLMGTF 116 usage_00253.pdb 61 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTH----TLEDFQRVLDVNLMGTF 116 usage_00254.pdb 61 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTH----TLEDFQRVLDVNLMGTF 116 Vq AL LAk kfg dvaVNCAGia tLedFqrv vNL GtF usage_00110.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00111.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00112.pdb 116 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 142 usage_00116.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00117.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00118.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00119.pdb 117 NVIRLVAGVMGQNEPDQGGQRGVIINT---- 143 usage_00127.pdb 103 NVLRLAAERIAKTEPVNAEERGVIINTASVA 133 usage_00251.pdb 117 NVIRLVAGEMGQNEPDQGGQRGVIINT---- 143 usage_00252.pdb 117 NVIRLVAGEMGQNEPDQGGQRGVIINT---- 143 usage_00253.pdb 117 NVIRLVAGEMGQNEPDQGGQRGVIINT---- 143 usage_00254.pdb 117 NVIRLVAGEMGQNEPDQGGQRGVIINT---- 143 NViRLvAg mgqnEPdqggqRGVIINT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################