################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:30 2021 # Report_file: c_0777_217.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00303.pdb # 2: usage_00543.pdb # 3: usage_01113.pdb # 4: usage_01114.pdb # 5: usage_01260.pdb # # Length: 67 # Identity: 3/ 67 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 67 ( 13.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 67 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00303.pdb 1 -KIAVLGATGRAGSA---IVAEARRRGHEVLAVVRDPQ-----KAADRLG-------A-T 43 usage_00543.pdb 1 -RVLVTGGSGYIGSH---TCVQLLQNGHDVIILDNL---CNS-KR-SVLPVIE--RLGGK 49 usage_01113.pdb 1 ETVCVTGASGFIGSW---LVMRLLERGYTVRATVRDPTN-V-KKV-KHLLDLPKA--E-T 51 usage_01114.pdb 1 ETVCVTGASGFIGSW---LVMRLLERGYTVRATVRDPTN-V-KKV-KHLLDLPKA--E-T 51 usage_01260.pdb 1 -KITFLGTG------SGLPARRLCEAGYALQVWNRT----P-ARA-ASLAALG------- 40 v G l G v r k L usage_00303.pdb 44 -VATLVK 49 usage_00543.pdb 50 HPTFVE- 55 usage_01113.pdb 52 HLTLW-- 56 usage_01114.pdb 52 HLTLWK- 57 usage_01260.pdb 41 -ATIHE- 45 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################