################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:11 2021 # Report_file: c_0328_20.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00051.pdb # 2: usage_00053.pdb # 3: usage_00089.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00204.pdb # 7: usage_00210.pdb # 8: usage_00510.pdb # # Length: 197 # Identity: 52/197 ( 26.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/197 ( 35.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/197 ( 12.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -KVGEARALYNLGNVYHAKGKSF---FPEEVRDALQAAVDFYEENLSLVTALGDRAAQGR 56 usage_00053.pdb 1 -KVGEARALYNLGNVYHAKGKSFGGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGR 59 usage_00089.pdb 1 -RAAQGRAFGNLGNTHYLLG-------------NFRDAVIAHEQRLLIAKEFGDKAAERR 46 usage_00128.pdb 1 -KVGEARALYNLGNVYHAKGKS-----E-DVRNALQAAVDLYEENLSLVTALGDRAAQGR 53 usage_00129.pdb 1 -KVGEARALYNLGNVYHAKGKSF----E-DVRNALQAAVDLYEENLSLVTALGDRAAQGR 54 usage_00204.pdb 1 -RGAQGRACGNLGNTYYLLG-------------DFQAAIEHHQERLRIAREFGDRAAERR 46 usage_00210.pdb 1 DRGAQGRACGNLGNTYYLLG-------------DFQAAIEHHQERLRIAREFGDRAAERR 47 usage_00510.pdb 1 -KVGEARALYNLGNVYHAKGKSF----PEDVRNALQAAVDLYEENLSLVTALGDRAAQGR 55 RA NLGN y G qaA e L GDrAA R usage_00051.pdb 57 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 116 usage_00053.pdb 60 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 119 usage_00089.pdb 47 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAID 106 usage_00128.pdb 54 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 113 usage_00129.pdb 55 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 114 usage_00204.pdb 47 ANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIE 106 usage_00210.pdb 48 ANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIE 107 usage_00510.pdb 56 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 115 A NLGN h LG F dA L A e g E LGN Y L ef tA e usage_00051.pdb 117 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGR 176 usage_00053.pdb 120 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGR 179 usage_00089.pdb 107 YHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELT 166 usage_00128.pdb 114 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 173 usage_00129.pdb 115 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 174 usage_00204.pdb 107 YHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAKELHDPVGEST 166 usage_00210.pdb 108 YHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAKELHDPVGEST 167 usage_00510.pdb 116 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 175 Y L A L DR Ea C SLGN e A y HL a El D GE usage_00051.pdb 177 ACWSLGNAYTALG---- 189 usage_00053.pdb 180 ACWSLGNAYTALG---- 192 usage_00089.pdb 167 ARLNLSDLQMVLGLSYS 183 usage_00128.pdb 174 ACWSLGNAYTALG---- 186 usage_00129.pdb 175 ACWSLGNAYTALG---- 187 usage_00204.pdb 167 ARVNISD---------- 173 usage_00210.pdb 168 ARVNISD---------- 174 usage_00510.pdb 176 ACWSLGNAYTALG---- 188 A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################