################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:54 2021 # Report_file: c_0840_19.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00297.pdb # 2: usage_01207.pdb # 3: usage_01208.pdb # 4: usage_01209.pdb # # Length: 81 # Identity: 22/ 81 ( 27.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 81 ( 85.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 81 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00297.pdb 1 DYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPI----NHAKKVKGYKRALTESGLPVRDSY 56 usage_01207.pdb 1 DNHAGASLAVKRLLELGHQRIAFVSTD-----ARISYVDQRLQGYVQTS-EAG-LPLAGY 53 usage_01208.pdb 1 -NHAGASLAVKRLLELGHQRIAFVSTD-----ARISYVDQRLQGYVQTS-EAG-LPLAGY 52 usage_01209.pdb 1 -NHAGASLAVKRLLELGHQRIAFVSTD-----ARISYVDQRLQGYVQTS-EAG-LPLAGY 52 nhagAslAVkrLlelGHqrIAFVStd yvdqrlqGYvqts EaG lplagY usage_00297.pdb 57 IVEGDYTYDSGIEAVEKLLEE 77 usage_01207.pdb 54 LQKADPTRPGGYLAASRLLAL 74 usage_01208.pdb 53 LQKADPTRPGGYLAASRLLAL 73 usage_01209.pdb 53 LQKADPTRPGGYLAASRLLAL 73 lqkaDpTrpgGylAasrLLal #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################