################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:50:32 2021 # Report_file: c_0039_24.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00126.pdb # 4: usage_00127.pdb # 5: usage_00131.pdb # 6: usage_00132.pdb # 7: usage_00186.pdb # 8: usage_00187.pdb # # Length: 263 # Identity: 97/263 ( 36.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/263 ( 37.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/263 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 LPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQ-TPK-IVT 58 usage_00018.pdb 1 LPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQ-TPK-IVT 58 usage_00126.pdb 1 -VDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICP 59 usage_00127.pdb 1 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICP 60 usage_00131.pdb 1 IVDIRQIWADLLGVPVEQVLAGDASSLNI-FDVISWSYIFGNNDSVQPWSKEETVKWICP 59 usage_00132.pdb 1 -VDIRQIWADLLGVPVEQVLAGDASSLNI-FDVISWSYIFGNNDSVQPWSKEETVKWICP 58 usage_00186.pdb 1 -VDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICP 59 usage_00187.pdb 1 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICP 60 R A L V E VL SSL V G S PW T K I usage_00017.pdb 59 VPGYDRHFLLLQTLGFELLTVD-QSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETI 117 usage_00018.pdb 59 VPGYDRHFLLLQTLGFELLTVD-QSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETI 117 usage_00126.pdb 60 VPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELV-KNPQVKGMWVVPVFSNPTGFTV 118 usage_00127.pdb 61 VPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELV-KNPQVKGMWVVPVFSNPTGFTV 119 usage_00131.pdb 60 VPGYDRHFSITERFGFE-ISVP-NEDGPD-DAVEELV-KNPQVKG-WVVPVFSNPTGFTV 114 usage_00132.pdb 59 VPGYDRHFSITERFGFE-ISVP-NEDGPD-DAVEELV-KNPQVKG-WVVPVFSNPTGFTV 113 usage_00186.pdb 60 VPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELV-KNPQVKGMWVVPVFSNPTGFTV 118 usage_00187.pdb 61 VPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELV-KNPQVKGMWVVPVFSNPTGFTV 119 VPGYDRHF GFE V DGPD DAVE L P VKG VP SNP G T usage_00017.pdb 118 SLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFAS 177 usage_00018.pdb 118 SLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFAS 177 usage_00126.pdb 119 TEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 177 usage_00127.pdb 120 TEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 178 usage_00131.pdb 115 TEDVAKRLSA-ETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 172 usage_00132.pdb 114 TEDVAKRLSA-ETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 171 usage_00186.pdb 119 TEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 177 usage_00187.pdb 120 TEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD-EFPEVIDIVGLGEAAGNPNRFWAFTS 178 A RL AAPDF D AY VH L E V L AG P R F S usage_00017.pdb 178 TSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLT--EYPGGLEGLR 235 usage_00018.pdb 178 TSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLT--EYPGGLEGLR 235 usage_00126.pdb 178 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVM 234 usage_00127.pdb 179 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVM 235 usage_00131.pdb 173 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVR 229 usage_00132.pdb 172 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVR 228 usage_00186.pdb 178 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVM 234 usage_00187.pdb 179 TSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDA---EGVRAVM 235 TSKIT AGAG F S N W G IGPNKV Q H G usage_00017.pdb 236 -DHAAIIAPKFRAVDEVLRAELG 257 usage_00018.pdb 236 -DHAAIIAPKFRAVDEVLRAELG 257 usage_00126.pdb 235 RKHAASLAPKFNKVLEILDSRL- 256 usage_00127.pdb 236 RKHAASLAPKFNKVLEILDSRL- 257 usage_00131.pdb 230 KHAASLAPKFNKVLEILDSRL-- 250 usage_00132.pdb 229 -KHAAS----------------- 233 usage_00186.pdb 235 RKHAASLAPKFNKVLEILDSRL- 256 usage_00187.pdb 236 RKHAASLAPKFNKVLEILDSRL- 257 hAa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################