################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:20 2021 # Report_file: c_0183_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00020.pdb # 4: usage_00030.pdb # 5: usage_00033.pdb # 6: usage_00034.pdb # 7: usage_00037.pdb # 8: usage_00038.pdb # 9: usage_00048.pdb # # Length: 190 # Identity: 5/190 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/190 ( 9.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/190 ( 36.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 CRTVYVEH-DIDGTHSDT-SVLDFVFESG-----------VG----TKEAIKDKLIEFGF 43 usage_00018.pdb 1 QVAAVGQE-PQV---FGR-SLQENIAYGLT--------Q-KP----TMEEITAAAVKSGA 42 usage_00020.pdb 1 GIFMAFQY-PVE---IPGVSNQFFLQTALNAVRSYRGQE-TLDRFDFQDLMEEKIALLKM 55 usage_00030.pdb 1 QIGFVSQDSAI----MAG-TIRENLTYGL--------EG-DY----TDEDLWQVLDLAFA 42 usage_00033.pdb 1 KIGTVSQE-PIL---FSC-SIAENIAYGAD-------DPSSV----TAEEIQRVAEVANA 44 usage_00034.pdb 1 -IGVVSQE-PVL---FAT-TIAENIRYGR---------E-DV----TMDEIEKAVKEANA 40 usage_00037.pdb 1 -CAVVSQQ-VHL---FND-TIANNIAYAAQ--------D-KY----SREEIIAAAKAAYA 41 usage_00038.pdb 1 NCAVVSQQ-VHL---FND-TIANNIAY-----------D-KY----SREEIIAAAKAAYA 39 usage_00048.pdb 1 -IGVVSQE-PVL---FAT-TIAENIRYGR---------E-DV----TMDEIEKAVKEANA 40 q usage_00017.pdb 44 T----------DEIAP-I-----SALSGGWK-KLALARAVLRNADILLLDEPTN-HLD-T 84 usage_00018.pdb 43 H-SFISGLPQGYDTE-V-DEAG-SQLSGGQRQAVALARALIRKPCVLILDDATS-AL--- 94 usage_00020.pdb 56 PED-------LLTRS-VN-----VGFSGGEKKRNDILQMAVLEPELCILDESDS-GLD-I 100 usage_00030.pdb 43 R-SFVENMPDQLNTE-V-GE-RGVKISGGQRQRLAIARAFLRNPKILMLDEA-TASLD-S 96 usage_00033.pdb 45 V-AFIRNFPQGFNTV-V-GE-KGVLLSGGQKQRIAIARALLKNPKILLLDEATS-ALD-A 98 usage_00034.pdb 41 Y-DFIMKLPHQFDTL-V-GE-RGAQLSGGQKQRIAIARALVRNPKILLLDEATS-ALD-T 94 usage_00037.pdb 42 L-EFIEKLPQGFDTV-I-GENG-ASLSGGQRQRLAIARALLRNSPVLILDEA------TT 91 usage_00038.pdb 40 L-EFIEKLPQGFDTV-I-GENG-ASLSGGQRQRLAIARALLRNSPVLILDEA------TT 89 usage_00048.pdb 41 Y-DFIMKLPHQFDTL-V-GE-RGAQLSGGQKQRIAIARALVRNPKILLLDEATS-ALD-T 94 SGG a ara l LDe usage_00017.pdb 85 VNVAWLVNYLNTC--------G-ITSITISHDSVFLD--NVCEYIINYEGLKLRKYKGNF 133 usage_00018.pdb 95 --DANSQLQVEQLLYESPERYS-RSVLLITQHLSLVE--Q-ADHILFLEGGAIREGGTH- 147 usage_00020.pdb 101 DALKVVADGVNSLR-----D-GKRSFIIVTHYQRILDYIK-PDYVHVLYQGRIVKSGDF- 152 usage_00030.pdb 97 ESESMVQKALDSLM-----K-G-RTTLVIAHRLSTIV--D-ADKIYFIEKGQITGSGKH- 145 usage_00033.pdb 99 ENEYLVQEALDRLM-----D-G-RTVLVIAHRLSTIK--N-ANMVAVLDQGKITEYGKH- 147 usage_00034.pdb 95 ESEAVVQAALDKAR-----E-G-RTTIVIAHRLSTVR--N-ADVIAGFDGGVIVEQGNH- 143 usage_00037.pdb 92 ESERAIQSALEELK-----K-D-RTVVVIAHRLSTIE--N-ADEILVIDHGEIRERGNH- 140 usage_00038.pdb 90 ESERAIQSALEELK-----K-D-RTVVVIAHRLSTIE--N-ADEILVIDHGEIRERGNH- 138 usage_00048.pdb 95 ESEAVVQAALDKAR-----E-G-RTTIVIAHRLSTVR--N-ADVIAGFDGGVIVEQGNH- 143 r i h g i g usage_00017.pdb 134 TEFVKKC--P 141 usage_00018.pdb 148 QQLMEKK--- 154 usage_00020.pdb 153 TLVKQLEEQG 162 usage_00030.pdb 146 NELVAT---- 151 usage_00033.pdb 148 EELLSK---- 153 usage_00034.pdb 144 DELMREK--- 150 usage_00037.pdb 141 KTLLEQN--- 147 usage_00038.pdb 139 KTLLEQN--- 145 usage_00048.pdb 144 DELMREK--- 150 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################