################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:32:58 2021 # Report_file: c_0230_8.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00008.pdb # 2: usage_00034.pdb # 3: usage_00052.pdb # 4: usage_01015.pdb # 5: usage_01021.pdb # 6: usage_01211.pdb # 7: usage_01215.pdb # 8: usage_01223.pdb # 9: usage_01241.pdb # 10: usage_01836.pdb # 11: usage_01842.pdb # 12: usage_01879.pdb # 13: usage_01949.pdb # 14: usage_02868.pdb # 15: usage_02885.pdb # 16: usage_02892.pdb # # Length: 143 # Identity: 116/143 ( 81.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 116/143 ( 81.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/143 ( 18.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_00034.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_00052.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_01015.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01021.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01211.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01215.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01223.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01241.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_01836.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01842.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_01879.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_01949.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_02868.pdb 1 KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 60 usage_02885.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 usage_02892.pdb 1 -IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL 59 IQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTL usage_00008.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_00034.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_00052.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_01015.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01021.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01211.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01215.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01223.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01241.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDH--- 117 usage_01836.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01842.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_01879.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_01949.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_02868.pdb 61 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 120 usage_02885.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 usage_02892.pdb 60 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE 119 YNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDH usage_00008.pdb 121 G---------------------- 121 usage_00034.pdb 121 G---------------------- 121 usage_00052.pdb 121 GLSAREAVKQAAKIIYLAHEDNK 143 usage_01015.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 usage_01021.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 usage_01211.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 usage_01215.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 usage_01223.pdb 120 G---------------------- 120 usage_01241.pdb ----------------------- usage_01836.pdb 120 GLSAREAVKQAAKIIYLAHEDN- 141 usage_01842.pdb 120 GLSAREAVKQAAKIIYLAHEDN- 141 usage_01879.pdb 121 GLSAREAVKQAAKIIYLAHEDNK 143 usage_01949.pdb 121 GLSAREAVKQAAKIIYLAHEDNK 143 usage_02868.pdb 121 GLSAREAVKQAAKIIYLAHEDNK 143 usage_02885.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 usage_02892.pdb 120 GLSAREAVKQAAKIIYLAHEDNK 142 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################