################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:42 2021 # Report_file: c_1363_69.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00256.pdb # 2: usage_01448.pdb # 3: usage_01618.pdb # 4: usage_01619.pdb # 5: usage_01620.pdb # # Length: 69 # Identity: 4/ 69 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 69 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 69 ( 55.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00256.pdb 1 ALYGFAQGLIQEAGIRIKQL-------MEQNLN-PNDLVTNVDKATEDFIFDTILETYPN 52 usage_01448.pdb 1 -----------SAMGISQMLKTKEQKV-------------NPREIAENITKHLP--DNEC 34 usage_01618.pdb 1 ALYGFAQGLIQEAGIRIKQL-------MEQNL---NDLVTNVDKATEDFIFDTILETYPN 50 usage_01619.pdb 1 ALYGFAQGLIQEAGIRIKQL-------MEQNL-TPNDLVTNVDKATEDFIFDTILETYPN 52 usage_01620.pdb 1 ALYGFAQGLIQEAGIRIKQL-------MEQN------LVTNVDKATEDFIFDTILETYPN 47 eAgirikqL NvdkatEdfifdti typn usage_00256.pdb 53 HQV---LG- 57 usage_01448.pdb 35 IEKVEI-AG 42 usage_01618.pdb 51 HQV---LG- 55 usage_01619.pdb 53 HQV---LG- 57 usage_01620.pdb 48 HQV---LG- 52 hqv g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################