################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:44 2021 # Report_file: c_0751_15.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00032.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00039.pdb # 5: usage_00040.pdb # 6: usage_00041.pdb # 7: usage_00110.pdb # 8: usage_00111.pdb # 9: usage_00202.pdb # 10: usage_00203.pdb # 11: usage_00308.pdb # 12: usage_00309.pdb # 13: usage_00311.pdb # 14: usage_00312.pdb # # Length: 85 # Identity: 49/ 85 ( 57.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/ 85 ( 57.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 85 ( 2.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00033.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00034.pdb 1 -LRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 59 usage_00039.pdb 1 IVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLLKGQPADNLNALTARMN 60 usage_00040.pdb 1 IVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLLKGQPADNLNALTARMN 60 usage_00041.pdb 1 IVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLLKGQPADNLNALTARMN 60 usage_00110.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00111.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00202.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00203.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00308.pdb 1 -LRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 59 usage_00309.pdb 1 VLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00311.pdb 1 VLRVRCSDGVEGIGEATTVGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 usage_00312.pdb 1 VLRVRCSDGVEGIGEATTVGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD 60 R SDG GIGEATT GGL YG ESPE I I L P L G ADN NA usage_00032.pdb 61 KLAKGNTFAKSGIESALLDAQGKR- 84 usage_00033.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 usage_00034.pdb 60 KLAKGNTFAKSGIESALLDAQGKRL 84 usage_00039.pdb 61 GAIKGNTFAKSAIETALLDAQGKAL 85 usage_00040.pdb 61 GAIKGNTFAKSAIETALLDAQGKAL 85 usage_00041.pdb 61 GAIKGNTFAKSAIETALLDAQGKAL 85 usage_00110.pdb 61 ALAKGNTFAKSGIESALLDAQGKR- 84 usage_00111.pdb 61 ALAKGNTFAKSGIESALLDAQGKR- 84 usage_00202.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 usage_00203.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 usage_00308.pdb 60 KLAKGNTFAKSGIESALLDAQGKRL 84 usage_00309.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 usage_00311.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 usage_00312.pdb 61 KLAKGNTFAKSGIESALLDAQGKRL 85 KGNTFAKS IE ALLDAQGK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################