################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:50 2021 # Report_file: c_1155_34.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00066.pdb # 2: usage_00296.pdb # 3: usage_00454.pdb # 4: usage_00560.pdb # 5: usage_00561.pdb # 6: usage_00728.pdb # 7: usage_00750.pdb # 8: usage_00751.pdb # 9: usage_00797.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 33 ( 6.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 33 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 RTDSPKAHVTHHSRPEDKVTL-RCWA-LG---- 27 usage_00296.pdb 1 -------HMTHHAVSDHEATL-RCWA-LS---- 20 usage_00454.pdb 1 ------VSVKGNRSKENHADL-GIFVKS-IING 25 usage_00560.pdb 1 -------HVTHHPRSKGEVTL-RCWA-LG---- 20 usage_00561.pdb 1 -------HVTHHPRSKGEVTL-RCWA-LG---- 20 usage_00728.pdb 1 --DSPKAHVTHHPRSKGEVTL-RCWA-LG---- 25 usage_00750.pdb 1 ---PPKTHVTHHPGSEGDVTL-RCWA-LG---- 24 usage_00751.pdb 1 --DPPKTHVTHHPGSEGDVTL-RCWA-LG---- 25 usage_00797.pdb 1 ---AI--TIEAEPRADGSRRTTRYDI-D----- 22 l r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################