################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:35 2021 # Report_file: c_1068_23.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00026.pdb # 2: usage_00033.pdb # 3: usage_00034.pdb # 4: usage_00093.pdb # 5: usage_00255.pdb # 6: usage_00267.pdb # 7: usage_00332.pdb # 8: usage_00498.pdb # 9: usage_00502.pdb # # Length: 56 # Identity: 6/ 56 ( 10.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 56 ( 76.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 56 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 -MGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTML--- 50 usage_00033.pdb 1 -MGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTML--- 50 usage_00034.pdb 1 TMGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLEN- 53 usage_00093.pdb 1 -MGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLE-- 51 usage_00255.pdb 1 TMGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLEN- 53 usage_00267.pdb 1 -MGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTML--- 50 usage_00332.pdb 1 TMGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLE-- 52 usage_00498.pdb 1 TSRQILDRLNKELVHNVALRVEET-EDA--DAFRVSGR--GELHLSVLIENMRREG 51 usage_00502.pdb 1 TMGQVGERIKQTFK--NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENT----- 49 mgQvgeRikqtfk ndLfViws dnd liiRcrvv edhmLkkient #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################