################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:42 2021 # Report_file: c_1076_9.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00216.pdb # 2: usage_00286.pdb # 3: usage_00287.pdb # 4: usage_00382.pdb # 5: usage_00688.pdb # 6: usage_00691.pdb # 7: usage_00724.pdb # 8: usage_00815.pdb # 9: usage_00816.pdb # 10: usage_00817.pdb # 11: usage_01430.pdb # 12: usage_01446.pdb # # Length: 81 # Identity: 10/ 81 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 81 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 81 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 -GYIKKTLGANILYLNPIFKAP-----------TNHKYDTQDYMAVDPAFGDNSTLQTLI 48 usage_00286.pdb 1 LPY-LKQLGVTTIWLSPVLDNL--DTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLV 57 usage_00287.pdb 1 LPY-LKQLGVTTIWLSPVLDNL--DTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLV 57 usage_00382.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_00688.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_00691.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_00724.pdb 1 LDY-VASLNVDGIWLSPFFTSPML----------DFGYDVSDYRDVDPMFGTLEDFKALL 49 usage_00815.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_00816.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_00817.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_01430.pdb 1 LPY-LEELGVTALYFTPIFASP-----------SHHKYDTADYLAIDPQFGDLPTFRRLV 48 usage_01446.pdb 1 -DH-LSKLGVNAVYFTPLFKAT-----------TNHKYDTEDYFQIDPQFGDKDTLKKLV 47 y Lgv P h Y t D FG t L usage_00216.pdb 49 NDIHSTANGPKGYLILDGVFN 69 usage_00286.pdb 58 NDAHQN----GIKVIVDFVPN 74 usage_00287.pdb 58 NDAHQN----GIKVIVDFVPN 74 usage_00382.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_00688.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_00691.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_00724.pdb 50 EKAHSL----GLKVMIDQVIS 66 usage_00815.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_00816.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_00817.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_01430.pdb 49 DEAHRR----GIKIILDAVFN 65 usage_01446.pdb 48 DLCHER----GIRVLLDAVFN 64 H g D V n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################