################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:41 2021 # Report_file: c_1028_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00108.pdb # 2: usage_00109.pdb # 3: usage_00110.pdb # 4: usage_00111.pdb # 5: usage_00123.pdb # 6: usage_00124.pdb # 7: usage_00178.pdb # 8: usage_00179.pdb # 9: usage_00281.pdb # 10: usage_00536.pdb # 11: usage_00537.pdb # 12: usage_00558.pdb # # Length: 72 # Identity: 7/ 72 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 72 ( 31.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 72 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00109.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00110.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00111.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00123.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00124.pdb 1 LPVALRA--PVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPF 58 usage_00178.pdb 1 LPVSLRA--PAISGQLTVENGPYVVETLARACDGCLNGEFAALITGPVHKGVINDAGISF 58 usage_00179.pdb 1 LPVSLRA--PAISGQLTVENGPYVVETLARACDGCLNGEFAALITGPVHKGVINDAGISF 58 usage_00281.pdb 1 IDEPLAQPEALEAGKVQAQAGDLAYRCVKRATELALRGDVQAIATAPLNKEALHLA---- 56 usage_00536.pdb 1 WDTPLAA--PVRPGQLDRANAAYVLETLTRAGQGCLDGHFAG-ITAPVHKGVINEAGIPF 57 usage_00537.pdb 1 WDTPLAA--PVRPGQLDRANAAYVLETLTRAGQGCLDGHFAG-ITAPVHKGVINEAGIPF 57 usage_00558.pdb 1 LPVKTAV--NVVPGKLDVGNSHYVVETLAKACDGAISGEFAALVTGPVQKSIINDAGIPF 58 l G l n yv etl rA g l G fa T Pv K in A usage_00108.pdb 59 TGHTEFFEERSQ 70 usage_00109.pdb 59 TGHTEFFEERSQ 70 usage_00110.pdb 59 TGHTEFFEERSQ 70 usage_00111.pdb 59 TGHTEFFEERSQ 70 usage_00123.pdb 59 TGHTEFFEERSQ 70 usage_00124.pdb 59 TGHTEFFEERSQ 70 usage_00178.pdb 59 TGHTEFFEERSQ 70 usage_00179.pdb 59 TGHTEFFEERSQ 70 usage_00281.pdb ------------ usage_00536.pdb 58 SGHTEFLADLTH 69 usage_00537.pdb 58 SGHTEFLADLTH 69 usage_00558.pdb 59 IGHTEFFADRSH 70 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################