################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:09:44 2021 # Report_file: c_0311_6.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00015.pdb # 8: usage_00016.pdb # 9: usage_00017.pdb # 10: usage_00020.pdb # 11: usage_00027.pdb # 12: usage_00028.pdb # 13: usage_00029.pdb # 14: usage_00037.pdb # 15: usage_00051.pdb # 16: usage_00054.pdb # 17: usage_00057.pdb # 18: usage_00058.pdb # 19: usage_00062.pdb # 20: usage_00063.pdb # 21: usage_00065.pdb # 22: usage_00066.pdb # 23: usage_00067.pdb # 24: usage_00069.pdb # 25: usage_00070.pdb # 26: usage_00072.pdb # 27: usage_00073.pdb # 28: usage_00077.pdb # 29: usage_00084.pdb # 30: usage_00089.pdb # 31: usage_00093.pdb # 32: usage_00094.pdb # 33: usage_00095.pdb # 34: usage_00096.pdb # 35: usage_00097.pdb # 36: usage_00098.pdb # 37: usage_00099.pdb # 38: usage_00100.pdb # # Length: 155 # Identity: 34/155 ( 21.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/155 ( 47.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/155 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 -------LKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 52 usage_00004.pdb 1 ------ALKRINKELNDLSKDPPTNCSA-GPVGDDMFHWQATIMGPEDSPYSGGVFFLNI 53 usage_00005.pdb 1 -----MALKRIQKELQDLQRDPPAQCSA-GPVGDDLFHWQATIMGPSDSPYQGGVFFLTI 54 usage_00006.pdb 1 -----MALKRIQKELQDLQRDPPAQCSA-GPVGDDLFHWQATIMGPSDSPYQGGVFFLTI 54 usage_00011.pdb 1 ----TMASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPAESPYSGGVFLVTI 55 usage_00012.pdb 1 ----TMASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPAESPYSGGVFLVTI 55 usage_00015.pdb 1 -----AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPD-NPPYDKGAFRIEI 54 usage_00016.pdb 1 ------ALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00017.pdb 1 ----SMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 55 usage_00020.pdb 1 GAMGSMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 59 usage_00027.pdb 1 ----AMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 55 usage_00028.pdb 1 ----AMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATAMGPNDSPYQGGVFFLTI 55 usage_00029.pdb 1 ---GAMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 56 usage_00037.pdb 1 -----MALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 54 usage_00051.pdb 1 ------ASKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00054.pdb 1 -------LKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 52 usage_00057.pdb 1 -----MALKRIHKELNDLARDPPAQSRA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 54 usage_00058.pdb 1 ---GSMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 56 usage_00062.pdb 1 ----SMALKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 55 usage_00063.pdb 1 ----HMALKRIQKELQDLGRDPPAQCSA-GPVGDDLFHWQATIMGPPESPYQGGVFFLTI 55 usage_00065.pdb 1 -------LKRIHKELNDLARDPPAQCRA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 52 usage_00066.pdb 1 -----GALKRIHKELNDLARDPPAQCRA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 54 usage_00067.pdb 1 ------ALKRIHKELNDLARDPPAQCRA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00069.pdb 1 ---HAMALKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 56 usage_00070.pdb 1 ----AMALKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 55 usage_00072.pdb 1 SKLLSTSAKRIQKELADITLDPPPNCSA-GPKGDNIYEWRSTILGPPGSVYEGGVFFLDI 59 usage_00073.pdb 1 ------ALKRINKELSDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00077.pdb 1 -----SALKRINKELSDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 54 usage_00084.pdb 1 -HMLEMALKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 58 usage_00089.pdb 1 ------ALKRINRELADLGKDPPSSSSA-GPVGDDLFHWQATIMGPADSPYAGGVFFLSI 53 usage_00093.pdb 1 ----FMALKRINKELSDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 55 usage_00094.pdb 1 ------ALKRINKELSDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00095.pdb 1 -------LKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 52 usage_00096.pdb 1 -------LKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 52 usage_00097.pdb 1 -------LKRIQKELSDLQRDPPAHCSA-GPVGDDLFHWQATIMGPPDSAYQGGVFFLTV 52 usage_00098.pdb 1 ------ASKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 53 usage_00099.pdb 1 -------LKRIHKELNDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 52 usage_00100.pdb 1 HHMNSMALKRINKELSDLARDPPAQCSA-GPVGDDMFHWQATIMGPNDSPYQGGVFFLTI 59 kRi kEL d dpp a gp Wq ti gp s Y gGvF usage_00003.pdb 53 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 110 usage_00004.pdb 54 HFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILK--DQWSPALTISKVLLSISSLLTD 111 usage_00005.pdb 55 HFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 112 usage_00006.pdb 55 HFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 112 usage_00011.pdb 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPALTISKVLLSICSLLTD 113 usage_00012.pdb 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPALTISKVLLSICSLLTD 113 usage_00015.pdb 55 NFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAEN-WKPATKTDQVIQSLIALVND 113 usage_00016.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSI-LDILR--SQWSPALTISKVLLSICSLLCD 110 usage_00017.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00020.pdb 60 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 117 usage_00027.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00028.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00029.pdb 57 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDALR--SQWSPALTISKVLLSICSLLCD 114 usage_00037.pdb 55 HFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQWSPALTISKVLLSICSLLCD 112 usage_00051.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQWSPALKISKVLLSICSLLCD 111 usage_00054.pdb 53 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 110 usage_00057.pdb 55 HFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILR--SQWSPALTISKVLLSISSLLSD 112 usage_00058.pdb 57 HFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQWSPALTISKVLLSICSLLCD 114 usage_00062.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00063.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00065.pdb 53 HFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILR--SQWSPALTISKVLLSICSLLCD 110 usage_00066.pdb 55 HFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILR--SQWSPALTISKVLLSICSLLCD 112 usage_00067.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILR--SQWSPALTISKVLLSICSLLCD 111 usage_00069.pdb 57 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 114 usage_00070.pdb 56 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 113 usage_00072.pdb 60 TFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILK--DNWSPALTISKVLLSICSLLTD 117 usage_00073.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQWSPALTISKVLLSICSLLCD 111 usage_00077.pdb 55 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 112 usage_00084.pdb 59 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 116 usage_00089.pdb 54 HFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR--DQWSPALTISKVLLSISSLLTD 111 usage_00093.pdb 56 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 113 usage_00094.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 111 usage_00095.pdb 53 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 110 usage_00096.pdb 53 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 110 usage_00097.pdb 53 HFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLLCD 110 usage_00098.pdb 54 HFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQWSPALKISKVLLSICSLLCD 111 usage_00099.pdb 53 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 110 usage_00100.pdb 60 HFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLLCD 117 Fp YPFKPPK F T HpNIns G i Ld l WsPAl skVllSi sLl D usage_00003.pdb 111 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 142 usage_00004.pdb 112 PNPDDPLVPEIAHLYKSDRMRYDQTAREWSQK--- 143 usage_00005.pdb 113 PNPDDPLVPDIAHIYKSDKEKYNRLAREWTQKYAM 147 usage_00006.pdb 113 PNPDDPLVPDIAHIYKSDKEKYNRLAREWTQK--- 144 usage_00011.pdb 114 PNPDDPLVPEIAHMYKTD----------------- 131 usage_00012.pdb 114 PNPDDPLVPEIAHMYKTD----------------- 131 usage_00015.pdb 114 PQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK--- 145 usage_00016.pdb 111 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 142 usage_00017.pdb 114 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 145 usage_00020.pdb 118 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 149 usage_00027.pdb 114 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 145 usage_00028.pdb 114 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 145 usage_00029.pdb 115 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 146 usage_00037.pdb 113 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 144 usage_00051.pdb 112 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 143 usage_00054.pdb 111 PNPDDPLVPEIARIYKT------------------ 127 usage_00057.pdb 113 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 144 usage_00058.pdb 115 PNPDDPLVPEIARIYK------------------- 130 usage_00062.pdb 114 PNPDDPLVPEIARIYQTDREKYNRIAREWTQK--- 145 usage_00063.pdb 114 PNPDDPLVPEIARIYKTDRERYNQLAREWTQK--- 145 usage_00065.pdb 111 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 142 usage_00066.pdb 113 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 144 usage_00067.pdb 112 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 143 usage_00069.pdb 115 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 146 usage_00070.pdb 114 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 145 usage_00072.pdb 118 CNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 152 usage_00073.pdb 112 PNPDDPLVPEIARIYKTDRDKYNRISREWTQK--- 143 usage_00077.pdb 113 PNPDDPLVPEIARIYKTDRDKYNRISREWTQK--- 144 usage_00084.pdb 117 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 148 usage_00089.pdb 112 PNPDDPLVPEIAHVYKTDRSRYELSAREWTRK--- 143 usage_00093.pdb 114 PNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 148 usage_00094.pdb 112 PNPDDPLVPEIARIYKTDRDKYNRISREWTQK--- 143 usage_00095.pdb 111 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 142 usage_00096.pdb 111 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 142 usage_00097.pdb 111 PNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK--- 142 usage_00098.pdb 112 PNPDDPLVPEIARIYKTDREKYNRIAREWTQK--- 143 usage_00099.pdb 111 PNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 145 usage_00100.pdb 118 PNPDDPLVPEIARIYK------------------- 133 pnP dPLv iA Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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