################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:07 2021 # Report_file: c_1056_43.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00155.pdb # 2: usage_00546.pdb # 3: usage_00592.pdb # 4: usage_00625.pdb # 5: usage_00711.pdb # 6: usage_00712.pdb # 7: usage_00714.pdb # 8: usage_00715.pdb # 9: usage_00716.pdb # 10: usage_00717.pdb # 11: usage_00719.pdb # 12: usage_00720.pdb # 13: usage_00721.pdb # 14: usage_00722.pdb # 15: usage_00723.pdb # 16: usage_00725.pdb # 17: usage_00884.pdb # 18: usage_00898.pdb # # Length: 76 # Identity: 5/ 76 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 76 ( 28.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 76 ( 64.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00155.pdb 1 PWPTLVTTFVQCFS---RYPDHMKRHDFFKSAMPEGYVQE-RTISFKDDGNYKTR-AEVK 55 usage_00546.pdb 1 -WPTLVTTLVQCFS---RYPDHMKRHDFFKSAMPEGYVQE-RTISFKDDGTYKTR-AEVK 54 usage_00592.pdb 1 SYDILTTALNRVFT---KYPEDI-P-DYFKQSFPEGYSWE-RTMTYEDKGICTIR-SDIS 53 usage_00625.pdb 1 -WPTLKTTLMQCFA---RYPDHMKQHDFFKSAMPEGYVQE-RTIFFKDDGNYKTR-AEVK 54 usage_00711.pdb 1 -WPTLVTTLVQAFS-------------FFKSAMPEGYVQE-RTIYFKDDGTYKTR-AEVK 44 usage_00712.pdb 1 PWPTLVTTLVQAFS------------DFFKSAMPEGYVQE-RTIYFKDDGTYKTR-AEVK 46 usage_00714.pdb 1 -WPTLVTTLVQAFS---R-D-HMKRHDFFKSAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 52 usage_00715.pdb 1 -WPTLVTTLVQAFS---R--------DFFKSAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 46 usage_00716.pdb 1 -WPTLVTTLVQAFSVQE------------------------RTIYFKCDGTYKTAE---- 31 usage_00717.pdb 1 PWPTLVTTLVQC------YPDHMKRHDFFKSA-PEGYVQE-RTIYFKCDGTYKTR-AEVK 51 usage_00719.pdb 1 -WPTLVTTLVQCFS---RYPDHMK----FKSAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 50 usage_00720.pdb 1 PWPTLVTTLVQCFS---------KRHDFFKSAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 49 usage_00721.pdb 1 PWPTLVTTLVQCFS---RYPDHMK----------------RRTIYFKCDGTYKTR-AE-- 38 usage_00722.pdb 1 PWPTLVTTL---------------------SAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 37 usage_00723.pdb 1 PWPTLVTTL---------YPDHMKRHDFFKSAMPEGYVQE-RTIYFKCDGTYKTR-AEVK 49 usage_00725.pdb 1 -WPTLVTTLVQCFS---R-PDHMKR--FFKSAMPEGYVQE-RTIYFKDDGTYKTR-AEVK 51 usage_00884.pdb 1 PWPTLVTTLVQCFS---RYPDHMKQHDFFKSAMPEGYVQE-RTIFFKDDGTYKTR-AEVK 55 usage_00898.pdb 1 -WPTLVTTLLKCFA---RYPDHMKQHDFFKSAMPEGYVQE-RTIFFKDDGNYKTR-AEVK 54 wptL Ttl RTi fk dG yktr usage_00155.pdb 56 FEGDTLVNRIELKGID 71 usage_00546.pdb 55 FEGDTLVNRIELKGID 70 usage_00592.pdb 54 LEGDCFFQN------- 62 usage_00625.pdb 55 FEGDTLVNRIELKGVD 70 usage_00711.pdb 45 FEGCTLVNRIELKG-- 58 usage_00712.pdb 47 FEGCTLVNRIELKGID 62 usage_00714.pdb 53 FEGDTLVNRIELKGID 68 usage_00715.pdb 47 FEGDTLVNRIELKGID 62 usage_00716.pdb 32 ----TLVNRIELKGID 43 usage_00717.pdb 52 FEGDTLVNRIELKGID 67 usage_00719.pdb 51 F---TLVNRIELKGID 63 usage_00720.pdb 50 FEGDTLVNRIELKGID 65 usage_00721.pdb 39 ---DTLVNRIELKGID 51 usage_00722.pdb 38 FEGDTLVNRIELKGID 53 usage_00723.pdb 50 FEGDTLVNRIELKGID 65 usage_00725.pdb 52 F---ELVNRIELKGID 64 usage_00884.pdb 56 FEGDTLVNRIELKGID 71 usage_00898.pdb 55 FEGDTLVNRIELKGI- 69 lvnr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################