################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:09 2021 # Report_file: c_0557_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00030.pdb # 2: usage_00072.pdb # 3: usage_00074.pdb # 4: usage_00098.pdb # 5: usage_00124.pdb # 6: usage_00152.pdb # # Length: 55 # Identity: 15/ 55 ( 27.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 55 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 55 ( 9.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 -VKLLESGAVLVKPGASVKLSCKTSGFTFSS-SYINWLKQKPGQSLEWIAWIYAG 53 usage_00072.pdb 1 --QVLESGGGLVKPGGSLRLSCAASGFTFSP-YSVFWVRQAPGKGLEWVSSIN-- 50 usage_00074.pdb 1 DVQLQESGPSLVKPSQTLSLTCSVTGDSITS-AYWSWIRKFPGNRLEYMGYVSY- 53 usage_00098.pdb 1 --HLQESGPGLVKPSQSLSLTCYVTGYSITSGYYWTWIRQFPGNKLEWMGYISY- 52 usage_00124.pdb 1 DVQLQESGPSLVKPSQTLSLTCSVTGDSITS-DYWSWIRKFPGNRLEYMGYVSY- 53 usage_00152.pdb 1 DVQLQESGPSLVKPSQTLSLTCSVTGDSITS-DYWSWIRKFPGNRLEYMGYVSY- 53 l ESG LVKP l L C G s y W r PG LE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################