################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:34:40 2021 # Report_file: c_0634_5.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00024.pdb # 6: usage_00025.pdb # 7: usage_00026.pdb # 8: usage_00027.pdb # 9: usage_00030.pdb # 10: usage_00031.pdb # 11: usage_00032.pdb # 12: usage_00063.pdb # 13: usage_00064.pdb # 14: usage_00076.pdb # 15: usage_00077.pdb # 16: usage_00080.pdb # # Length: 117 # Identity: 96/117 ( 82.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 96/117 ( 82.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/117 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -----IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKR-YRKYHQRPT 54 usage_00005.pdb 1 --WKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKR-YRKYHQRPT 57 usage_00006.pdb 1 --WKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKR-YRKYHQRPT 57 usage_00007.pdb 1 ----KIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKR-YRKYHQRPT 55 usage_00024.pdb 1 APWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 60 usage_00025.pdb 1 -----IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 55 usage_00026.pdb 1 -----IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 55 usage_00027.pdb 1 -----IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 55 usage_00030.pdb 1 APWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPT 60 usage_00031.pdb 1 -----IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 55 usage_00032.pdb 1 -----IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 55 usage_00063.pdb 1 -PWKKIQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPT 59 usage_00064.pdb 1 ---KKIQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPT 57 usage_00076.pdb 1 APWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 60 usage_00077.pdb 1 APWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPT 60 usage_00080.pdb 1 --WKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPT 58 IQQNTFTRWCNEHLK V KRI NLQTDLSDGLRLIALLEVLSQK RK QRPT usage_00004.pdb 55 FRQ-QLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSI----- 105 usage_00005.pdb 58 FRQ-QLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISP--- 110 usage_00006.pdb 58 FRQ-QLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYS------ 107 usage_00007.pdb 56 FRQ-QLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISP--- 108 usage_00024.pdb 61 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISM--- 114 usage_00025.pdb 56 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPM- 111 usage_00026.pdb 56 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSI----- 107 usage_00027.pdb 56 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMW 112 usage_00030.pdb 61 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSI----- 112 usage_00031.pdb 56 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPM- 111 usage_00032.pdb 56 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPM- 111 usage_00063.pdb 60 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSI----- 111 usage_00064.pdb 58 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMP-- 112 usage_00076.pdb 61 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMW 117 usage_00077.pdb 61 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSI----- 112 usage_00080.pdb 59 FRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSI----- 110 FRQ QLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGL WTLILHYS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################