################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:46:40 2021 # Report_file: c_0284_3.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00004.pdb # 3: usage_00005.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00027.pdb # 7: usage_00028.pdb # 8: usage_00032.pdb # 9: usage_00040.pdb # 10: usage_00050.pdb # 11: usage_00070.pdb # 12: usage_00097.pdb # 13: usage_00098.pdb # 14: usage_00118.pdb # 15: usage_00125.pdb # 16: usage_00126.pdb # 17: usage_00127.pdb # # Length: 87 # Identity: 20/ 87 ( 23.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/ 87 ( 89.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 87 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --VKLEITQNHISAHVNSP-EVGKVNEDLDIVSQSGSDLTISFNPTYLIESLKAIKSETV 57 usage_00004.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00005.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00009.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00010.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00027.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00028.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00032.pdb 1 --VRLYVSENQLKITANNPEQE-EAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 56 usage_00040.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00050.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00070.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00097.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEECLDV-TYSGAEMEIGFNVSYVLDVLNALKSENV 58 usage_00098.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00118.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00125.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00126.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 usage_00127.pdb 1 RGVRLYVSENQLKITANNP-EQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENV 58 VrLyvseNqlkitaNnP e eaeE LDv tySGaemeIgFNvsYvldvLnAlK EnV usage_00001.pdb 58 KIHFLSPVRPFTLTPGDEEESFIQLIT 84 usage_00004.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00005.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00009.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00010.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00027.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00028.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00032.pdb 57 RMMLTDSVSSVQIEDAASQSAAYVVM- 82 usage_00040.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00050.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00070.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00097.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00098.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00118.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00125.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00126.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 usage_00127.pdb 59 RMMLTDSVSSVQIEDAASQSAAYVVM- 84 rmmltdsVssvqiedaasqsaayvvm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################