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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:59:01 2021
# Report_file: c_1121_9.html
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#====================================
# Aligned_structures: 13
#   1: usage_00039.pdb
#   2: usage_00040.pdb
#   3: usage_00041.pdb
#   4: usage_00042.pdb
#   5: usage_00043.pdb
#   6: usage_00044.pdb
#   7: usage_00045.pdb
#   8: usage_00046.pdb
#   9: usage_00047.pdb
#  10: usage_00048.pdb
#  11: usage_00049.pdb
#  12: usage_00488.pdb
#  13: usage_00489.pdb
#
# Length:        112
# Identity:       93/112 ( 83.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     93/112 ( 83.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/112 ( 17.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00039.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00040.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00041.pdb         1  PLPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   55
usage_00042.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00043.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00044.pdb         1  PLPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   55
usage_00045.pdb         1  PLPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   55
usage_00046.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00047.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF---   54
usage_00048.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLAER---GAFVMGMGDLIMPSILVVSSHVFAVL   56
usage_00049.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--E--GAFVMGMGDLIMPSILVVSSHVF-VL   54
usage_00488.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--E--GAFVMGMGDLIMPSILVVSSHVF-VL   54
usage_00489.pdb         1  -LPVLVLLVLLAVYDAISVYRTKHMITLA--EGVGAFVMGMGDLIMPSILVVSSHVF-V-   55
                            LPVLVLLVLLAVYDAISVYRTKHMITLA     GAFVMGMGDLIMPSILVVSSHVF   

usage_00039.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  104
usage_00040.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  104
usage_00041.pdb        56  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  105
usage_00042.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  104
usage_00043.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  104
usage_00044.pdb        56  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  105
usage_00045.pdb        56  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGA---  102
usage_00046.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAA--  102
usage_00047.pdb        55  --LSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  104
usage_00048.pdb        57  WTLSAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAALA  108
usage_00049.pdb        55  WTLSAPTLGAMVGSLVGLAVLLYFVN----QAGLPPLNGGAILGFLVGA---   99
usage_00488.pdb        55  WTLSAPTLGAMVGSLVGLAVLLYFVN----QAGLPPLNGGAILGFLVGA---   99
usage_00489.pdb        56  ---SAPTLGAMVGSLVGLAVLLYFVNKGNPQAGLPPLNGGAILGFLVGAA--  102
                              SAPTLGAMVGSLVGLAVLLYFVN    QAGLPPLNGGAILGFLVGA   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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