################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:23 2021 # Report_file: c_0709_90.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00231.pdb # 2: usage_00398.pdb # 3: usage_00464.pdb # 4: usage_00465.pdb # 5: usage_00532.pdb # 6: usage_00533.pdb # # Length: 86 # Identity: 12/ 86 ( 14.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 86 ( 19.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 86 ( 37.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00231.pdb 1 ---GAPWPRP-AD----GGPRRAGISSFGAGGANAHVIVAEYRSATPAPATPAPSARPVL 52 usage_00398.pdb 1 ---KQEWKSV--------LPRRAGISSFGIGGVNAHIVIEEYMP----------E-QPNV 38 usage_00464.pdb 1 ---LAPWTPR-VDATGRALPRTAAISAFGAGGSNAHVILEESVPP-TQTP-A-QE-PPYV 52 usage_00465.pdb 1 ---LAPWT----------PPRTAAISAFGAGGSNAHVILEESVP---------QE-PPYV 37 usage_00532.pdb 1 ---KKELTREN-------RAHRMALSSFGLGGTNTHAIFEQYP-----------A-GPFI 38 usage_00533.pdb 1 KKE---LT-----------AHRMALSSFGLGGTNTHAIFEQYPDA-SEAAD--AA-GPFI 42 S FG GG N H i e P usage_00231.pdb 53 LPLSARTTEDLHARAGQLSDLLR--- 75 usage_00398.pdb 39 IVLSAKNKSRLIDRASQLLEVIRNK- 63 usage_00464.pdb 53 CALSARDAERLHEHTARTAEFLRG-- 76 usage_00465.pdb 38 CALSARDAERLHEHTARTAEFLRG-- 61 usage_00532.pdb 39 IPLSARKKDRLKEYAKQLLAFLER-- 62 usage_00533.pdb 43 IPLSARKKDRLKEYAKQLLAFLERKT 68 LSAr rL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################