################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:28 2021 # Report_file: c_0745_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00025.pdb # 5: usage_00040.pdb # # Length: 71 # Identity: 14/ 71 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 71 ( 87.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 71 ( 9.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 KNYTLSGHFITPE-LLYSK-VKWDKLTADEQQKILTLAREAQFEQRKLWDAYNQEALAKK 58 usage_00002.pdb 1 KNYTLSGHFITPE-LLYSK-VKWDKLTADEQQKILTLAREAQFEQRKLWDAYNQEALAKK 58 usage_00003.pdb 1 KNYTLSGHFITPE-LLYSK-VKWDKLTADEQQKILTLAREAQFEQRKLWDAYNQEALAKK 58 usage_00025.pdb 1 KNYTLSGHFITPEMLLYSK-VKWDKLTADEQQKILTLAREAQFEQRKLWDAYNQEALAKM 59 usage_00040.pdb 1 KYLSKVGYLTNVA-LIVGGEAFFSTLPEDQLK-IHESAYDAGLYSQKLTIEKDNE-IEKK 57 KnytlsGhfitpe Llysk vkwdkLtaDeqq IltlAreAqfeqrKLwdaynqE laKk usage_00001.pdb 59 AGG-VQFHEID 68 usage_00002.pdb 59 AGG-VQFHEID 68 usage_00003.pdb 59 AGG-VQFHE-- 66 usage_00025.pdb 60 KAGGVQFHE-- 68 usage_00040.pdb 58 EAG-VEIIDVD 67 G Vqfhe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################