################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:51:27 2021 # Report_file: c_0648_16.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00006.pdb # 2: usage_00055.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00058.pdb # 6: usage_00130.pdb # 7: usage_00131.pdb # 8: usage_00137.pdb # 9: usage_00173.pdb # 10: usage_00174.pdb # 11: usage_00175.pdb # 12: usage_00228.pdb # 13: usage_00289.pdb # 14: usage_00290.pdb # 15: usage_00291.pdb # 16: usage_00292.pdb # 17: usage_00293.pdb # # Length: 52 # Identity: 22/ 52 ( 42.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 52 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 52 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 ---LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGF- 48 usage_00055.pdb 1 ------VRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFG 46 usage_00056.pdb 1 ---LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFG 49 usage_00057.pdb 1 ------VRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFG 46 usage_00058.pdb 1 ---LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFG 49 usage_00130.pdb 1 --NLKIVRMDRTAGCVTGGEEIWLLCDKVQKDDIQIRFYEEEVW--EGF--- 45 usage_00131.pdb 1 --NLKIVRMDRTAGCVTGGEEIMLLCDKVQKDDIQIRFYEEVW---EGF--- 44 usage_00137.pdb 1 ---LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFG 49 usage_00173.pdb 1 --NLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENG-WQAF-- 47 usage_00174.pdb 1 --NLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENG-WQAF-- 47 usage_00175.pdb 1 ASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENG-WQAF-- 49 usage_00228.pdb 1 ---LKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENG-WQAFG- 47 usage_00289.pdb 1 --NLKIVRMDRTAGCVTGGEEIILLCDKVQKDDIQIRFYEVWE---GF---- 43 usage_00290.pdb 1 --NLKIVRMDRTAGCVTGGEEIMLLCDKVQKDDIQIRFYEEEENGGVWEG-- 48 usage_00291.pdb 1 --NLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIIRFYEEEENGG-VWEG-- 47 usage_00292.pdb 1 --NLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEGVW-EGF--- 46 usage_00293.pdb 1 ---LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEGVW-EGF--- 45 RMD TAG V GG E LLCDKVQKDDI rfyE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################