################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:09 2021 # Report_file: c_1330_51.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00351.pdb # 2: usage_00352.pdb # 3: usage_00353.pdb # 4: usage_00354.pdb # 5: usage_00355.pdb # 6: usage_00356.pdb # 7: usage_00357.pdb # 8: usage_00358.pdb # 9: usage_00360.pdb # 10: usage_00938.pdb # 11: usage_01107.pdb # # Length: 69 # Identity: 18/ 69 ( 26.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 69 ( 26.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 69 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00351.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWKSVCV--------DM-VLEQFRKSVVHVREILL 48 usage_00352.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWK--------------SVLEQFRKSVVHVREILL 43 usage_00353.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWK----------CVDM-VLEQFRKSVVHVREILL 46 usage_00354.pdb 1 --PEVSLAREAGLSYASIAIVTDFDCWKS---------CVDM-VLEQFRKSVVHVREILL 48 usage_00355.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWK--------------S-LEQFRKSVVHVREILL 42 usage_00356.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWK------------DM-VLEQFRKSVVHVREILL 44 usage_00357.pdb 1 ---EVSLAREAGLSYASIAIVTD---------------CVDM-VLEQFRKSVVHVREILL 41 usage_00358.pdb 1 ---EVSLAREAGLSYASIAIVTDFDCWK-------------M-VLEQFRKSVVHVREILL 43 usage_00360.pdb 1 ---EVSLAREAGLSYASIAIVTDF-------------DCVDM-VLEQFRKSVVHVREILL 43 usage_00938.pdb 1 NMPEAKLAREASIAYATLALVTDFDCWHP---NEQAV-SADY-AIQNLMKNADNAQQVIK 55 usage_01107.pdb 1 NMPEAKLAREASIAYATLALVTDFDCWHP---NEQAV-SADY-AIQNLMKNADNAQQVIK 55 E LAREA YA A VTD K usage_00351.pdb 49 EAVALIGAE 57 usage_00352.pdb 44 EAVALIGAE 52 usage_00353.pdb 47 EAVALIGA- 54 usage_00354.pdb 49 EAVALIGAE 57 usage_00355.pdb 43 EAVALIGAE 51 usage_00356.pdb 45 EAVALIGAE 53 usage_00357.pdb 42 EAVALIGAE 50 usage_00358.pdb 44 EAVALIGAE 52 usage_00360.pdb 44 EAVALIGA- 51 usage_00938.pdb 56 QAVALIASE 64 usage_01107.pdb 56 QAVALIASE 64 AVALI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################