################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:47 2021 # Report_file: c_1140_48.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00424.pdb # 2: usage_00425.pdb # 3: usage_00525.pdb # 4: usage_00526.pdb # 5: usage_00527.pdb # 6: usage_00528.pdb # 7: usage_00529.pdb # 8: usage_00530.pdb # 9: usage_00531.pdb # 10: usage_00532.pdb # 11: usage_00533.pdb # 12: usage_00534.pdb # 13: usage_00535.pdb # 14: usage_00536.pdb # 15: usage_00537.pdb # 16: usage_00538.pdb # 17: usage_00716.pdb # 18: usage_00736.pdb # # Length: 75 # Identity: 2/ 75 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 75 ( 22.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 75 ( 52.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00424.pdb 1 -----------------KQAGDLYRSYSAKEKTDLVQKFGESLADTLTESKNIMLSYLY- 42 usage_00425.pdb 1 ----------------FKQAGDLYRSYSAKEKTDLVQKFGESLADTLTESKNIMLSYLY- 43 usage_00525.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00526.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00527.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00528.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00529.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00530.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00531.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00532.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00533.pdb 1 -----------------KQAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 42 usage_00534.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00535.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00536.pdb 1 -----------------KQAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 42 usage_00537.pdb 1 -----------------KQAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 42 usage_00538.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 usage_00716.pdb 1 FKRNYMSDNEGHNQFNINAFRKAIKDFNSNERSILLMQLRESG----------------L 44 usage_00736.pdb 1 ------------------QAGEKYRSYSEEEKQALIKNLTADLKGVNEKTKLLAICNFY- 41 qag yrsys Ek L l usage_00424.pdb 43 KEDPNYGTRVAEVAK 57 usage_00425.pdb 44 KEDPNYGTRVAEVAK 58 usage_00525.pdb 42 RADEDYGQRLADSL- 55 usage_00526.pdb 42 RADEDYGQRLADSLG 56 usage_00527.pdb 42 RADEDYGQRLADSLG 56 usage_00528.pdb 42 RADEDYGQRLADSLG 56 usage_00529.pdb 42 RADEDYGQRLADSLG 56 usage_00530.pdb 42 RADEDYGQRLADSLG 56 usage_00531.pdb 42 RADEDYGQRLADSLG 56 usage_00532.pdb 42 RADEDYGQRLADSLG 56 usage_00533.pdb 43 RADEDYGQRLADSLG 57 usage_00534.pdb 42 RADEDYGQRLADSLG 56 usage_00535.pdb 42 RADEDYGQRLADSL- 55 usage_00536.pdb 43 RADEDYGQRLADSLG 57 usage_00537.pdb 43 RADEDYGQRLADSLG 57 usage_00538.pdb 42 RADEDYGQRLADSLG 56 usage_00716.pdb 45 HLPEDLLEQLG---- 55 usage_00736.pdb 42 RADEDYGQRLADSLG 56 d yg r a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################