################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:43:24 2021 # Report_file: c_0067_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00008.pdb # 5: usage_00011.pdb # 6: usage_00029.pdb # 7: usage_00034.pdb # 8: usage_00037.pdb # 9: usage_00039.pdb # 10: usage_00040.pdb # 11: usage_00041.pdb # 12: usage_00042.pdb # 13: usage_00047.pdb # 14: usage_00048.pdb # 15: usage_00051.pdb # 16: usage_00052.pdb # 17: usage_00053.pdb # # Length: 160 # Identity: 37/160 ( 23.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/160 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/160 ( 5.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --VRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00003.pdb 1 --VELNDAAHSDTPILCLSLSPASDPRLAHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00004.pdb 1 --VRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00008.pdb 1 --VELNDAAHSDTPILCLSLSPASDPRLAHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00011.pdb 1 --VELSTNTNAGTQVFGFQLNPGAESVMNRTLMGEILNYYAHWSGSIKITFVFCGSAMTT 58 usage_00029.pdb 1 YRIPVQSGNHQSSQVFGFQVQPGLDGVFKHTLLGEILNYYAHWSGSIKLTFVFCGSAMAT 60 usage_00034.pdb 1 YRIPVQSGNHQSSQVFGFQVQPGLDGVFKHTLLGEILNYYAHWSGSIKLTFVFCGSAMAT 60 usage_00037.pdb 1 --VRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00039.pdb 1 YRVRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 60 usage_00040.pdb 1 YRVRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 60 usage_00041.pdb 1 --VRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00042.pdb 1 --IPLD-DKGSATPIFSISLSPASDKRLQYTMLGEILNYYTHWTGSLRFTFLFCGSMMAT 57 usage_00047.pdb 1 --IPVRSNEGSGTQVFGFPLQPGYSSVFSRTLLGEILNYYTHWSGSIKLTFMFCGSAMAT 58 usage_00048.pdb 1 --IPVQSNPTNGSQVFGFPLTPGANSVLNRTLLGEILNYYAHWSGSIKLTFMFCGSAMAT 58 usage_00051.pdb 1 YRVRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 60 usage_00052.pdb 1 --VRLSDKPHTDDPILCLSLSPASDPRLSHTMLGEILNYYTHWAGSLKFTFLFCGSMMAT 58 usage_00053.pdb 1 -YVAVP-TQFDDRPLISFPITL-SDPVYQNTLVGAISSNFANYRGCIQITLTFCGPMMAR 57 p T GeIlnyy hw Gs Tf FCGs Mat usage_00002.pdb 59 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 115 usage_00003.pdb 59 GKLLVSYAPPGAEAPKSRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTIN---DSF 115 usage_00004.pdb 59 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 115 usage_00008.pdb 59 GKLLVSYAPPGAEAPKSRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTIN---DSF 115 usage_00011.pdb 59 GKFLLSYAPPGAGAPKTRKDAMLGTHVVWDVGLQSSCVLCIPWISQTHYRFVEK---DPY 115 usage_00029.pdb 61 GKFLLAYAPPGANAPKSRKDAMLGTHIIWDVGLQSSCVLCIPWISQTHYRLVQQ---DEY 117 usage_00034.pdb 61 GKFLLAYAPPGANAPKSRKDAMLGTHIIWDVGLQSSCVLCIPWISQTHYRLVQQ---DEY 117 usage_00037.pdb 59 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 115 usage_00039.pdb 61 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 117 usage_00040.pdb 61 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 117 usage_00041.pdb 59 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 115 usage_00042.pdb 58 GKILLSYSPPGAKPPTTRKDAMLGTHIIWDLGLQSSCTMLAPWISNTVYRRCIK---DDF 114 usage_00047.pdb 59 GKFLLAYSPPGAGAPTKRVDAMLGTHVVWDVGLQSSCVLCIPWISQTHYRYVAS---DEY 115 usage_00048.pdb 59 GKFLLAYSPPGAGAPTTRKEAMLGTHVIWDVGLQSSCVLCIPWISQTHYRYVVM---DEY 115 usage_00051.pdb 61 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 117 usage_00052.pdb 59 GKLLVSYAPPGADPPKKRKEAMLGTHVIWDIGLQSSCTMVVPWISNTTYRQTID---DSF 115 usage_00053.pdb 58 GKFLLSYSPPNGTQPQTLSEAMQCTYSIWDIGLNSSWTFVVPYISPSDYRETRAITNSVY 117 GK L Y PPga P r AMlgTh WD GLqSSc PwIS t YR d usage_00002.pdb 116 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVR- 154 usage_00003.pdb 116 TEGGYISMFYQTRVVVPLSTPRKMDILGFVSACNDFSVRL 155 usage_00004.pdb 116 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVR- 154 usage_00008.pdb 116 TEGGYISMFYQTRVVVPLSTPRKMDILGFVSACNDFSVRL 155 usage_00011.pdb 116 TNAGFVTCWYQTSVVSPASNQPKCYMMCMVSACNDFSVRM 155 usage_00029.pdb 118 TSAGNVTCWYQTGIVVPAGTPTSCSIMCFVSACNDFSVRL 157 usage_00034.pdb 118 TSAGNVTCWYQTGIVVPAGTPTSCSIMCFVSACNDFSVRL 157 usage_00037.pdb 116 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 155 usage_00039.pdb 118 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 157 usage_00040.pdb 118 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 157 usage_00041.pdb 116 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 155 usage_00042.pdb 115 TEGGYITCFYQTRIVVPSGTPTSMFMLAFVSACPDFSVRL 154 usage_00047.pdb 116 TAGGFITCWYQTNIVVPADAQSSCYIMCFVSACNDFSVRL 155 usage_00048.pdb 116 TAGGYITCWYQTNIVVPADAQSDCKILCFVSACNDFSVRM 155 usage_00051.pdb 118 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 157 usage_00052.pdb 116 TEGGYISVFYQTRIVVPLSTPREMDILGFVSACNDFSVRL 155 usage_00053.pdb 118 SADGWFSLHKLTKITLPPDCPQSPCILFFASAGEDYTLRL 157 t G yqT v P fvSAc DfsvR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################