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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:14:37 2021
# Report_file: c_0233_13.html
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#====================================
# Aligned_structures: 5
#   1: usage_00066.pdb
#   2: usage_00076.pdb
#   3: usage_00077.pdb
#   4: usage_00078.pdb
#   5: usage_00125.pdb
#
# Length:        179
# Identity:      150/179 ( 83.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    151/179 ( 84.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           28/179 ( 15.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00066.pdb         1  -NILKVIILGDSGVGKTSLMHRYVNDKYSQ--QY---IGADFLTKEVTVDGDKVATMQVW   54
usage_00076.pdb         1  -NILKVIILGDSGVGKTSLMHRYVNDKYSC------TIGADFLTKEVTVDGDKVATMQVW   53
usage_00077.pdb         1  --ILKVIILGDSGVGKTSLMHRYVNDKYSC--QYKATIGADFLTKEVTVDGDKVATMQVW   56
usage_00078.pdb         1  -NILKVIILGDSGVGKTSLMHRYVNDKYSCKA----TIGADFLTKEVT-----VATMQVW   50
usage_00125.pdb         1  KNILKVIILGDSGVGKTSLMHRYVNDKYSC--QYIATIGADFLTKEVTVDGDKVATMQVW   58
                             ILKVIILGDSGVGKTSLMHRYVNDKYSc       IGADFLTKEVT     VATMQVW

usage_00066.pdb        55  DTA----------AFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI  104
usage_00076.pdb        54  DT---------GVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI  104
usage_00077.pdb        57  DTAGQERFQ--SVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI  114
usage_00078.pdb        51  DTAGQER----GVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI  106
usage_00125.pdb        59  DTAGLERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI  118
                           DT           AFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI

usage_00066.pdb       105  LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ-  162
usage_00076.pdb       105  LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA  163
usage_00077.pdb       115  LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ---  170
usage_00078.pdb       107  LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA  165
usage_00125.pdb       119  LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ-  176
                           LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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