################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:59 2021 # Report_file: c_0840_24.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00391.pdb # 2: usage_00392.pdb # 3: usage_00543.pdb # 4: usage_00544.pdb # 5: usage_00545.pdb # 6: usage_00546.pdb # 7: usage_00547.pdb # 8: usage_00548.pdb # # Length: 81 # Identity: 32/ 81 ( 39.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 81 ( 39.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 81 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00391.pdb 1 -FRPAFCYLLASLKQLYPAARIYNITNSELSEEVTDS-DEICRHYGIENIRLHDIDKQWG 58 usage_00392.pdb 1 --RPAFCYLLASLKQLYPAARIYNITNSELSEEVTDS-DEICRHYGIENIRLHDIDKQWG 57 usage_00543.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 usage_00544.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 usage_00545.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 usage_00546.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 usage_00547.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 usage_00548.pdb 1 R---PAAYLLDH-IDRYPNVEIYFLLNSGLKEEFNESVRAICNHYNIDCIELHDIDKKSG 56 YLL YP IY NS L EE S IC HY I I LHDIDK G usage_00391.pdb 59 HPSVQGQSIDAQVWESV-SPI 78 usage_00392.pdb 58 HPSVQGQSIDAQVWESV-SPI 77 usage_00543.pdb 57 HPSIKGEQISEQIKFR----- 72 usage_00544.pdb 57 HPSIKGEQISEQIKFR----- 72 usage_00545.pdb 57 HPSIKGEQISEQIKFRKT--- 74 usage_00546.pdb 57 HPSIKGEQISEQIKFR----- 72 usage_00547.pdb 57 HPSIKGEQISEQIKFRK---- 73 usage_00548.pdb 57 HPSIKGEQISEQIKFRKT--- 74 HPS G I Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################