################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:54 2021 # Report_file: c_1142_194.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00300.pdb # 2: usage_00307.pdb # 3: usage_00681.pdb # 4: usage_00778.pdb # 5: usage_01109.pdb # 6: usage_01110.pdb # 7: usage_01139.pdb # 8: usage_01140.pdb # 9: usage_01156.pdb # 10: usage_01207.pdb # 11: usage_01786.pdb # 12: usage_01817.pdb # 13: usage_01818.pdb # 14: usage_01819.pdb # 15: usage_01820.pdb # 16: usage_02211.pdb # 17: usage_02347.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 63 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 63 ( 88.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00300.pdb 1 --VITIEPGIY--------GGVRIEDTVLITENGAKRLT--------------------- 29 usage_00307.pdb 1 -------------------------------QRKLDPNTPFLTGMRILDVLFPVAMGGTA 29 usage_00681.pdb 1 ---FSNEPGIYIPG----KVGVRIEDCLYVTENGCESFT--------------------- 32 usage_00778.pdb 1 GMTFTIEPGIYVPG----LGGVRIEDDIVVDEGKGRRLT--------------------- 35 usage_01109.pdb 1 --TFTIEPGIYVPG----LGGVRIEDDIVVDEGKGRRLT--------------------- 33 usage_01110.pdb 1 --TFTIEPGIYVPG----LGGVRIEDDIVVDEGKGRRLT--------------------- 33 usage_01139.pdb 1 --VITIEPGIYIPK----IGGVRIEDTILITKNGSKRLT--------------------- 33 usage_01140.pdb 1 --VITIEPGIYIPK----IGGVRIEDTILITKNGSKRLT--------------------- 33 usage_01156.pdb 1 --VVSMEPMVMBPEGEPGAGGYREHDILVIKENBTENIT--------------------- 37 usage_01207.pdb 1 --VITIEPGAYLPG----VGGVRIEDLILVTEDGYEVLS--------------------- 33 usage_01786.pdb 1 --AFSIEPGIYFPG----RWGARIEDIVVVTENGALSV---------------------- 32 usage_01817.pdb 1 --AVTVEPGIYIPG----IGGVRIEDDIIVTSEGNEVIT--------------------- 33 usage_01818.pdb 1 --AVTVEPGIYIPG----IGGVRIEDDIIVTSEGNEVIT--------------------- 33 usage_01819.pdb 1 --AVTVEPGIYIPG----IGGVRIEDDIIVTSEGNEVIT--------------------- 33 usage_01820.pdb 1 --AVTVEPGIYIPG----IGGVRIEDDIIVTSEGNEVIT--------------------- 33 usage_02211.pdb 1 --VITIEPGAYLPG----VGGVRIEDLILVTEDGYEVLS--------------------- 33 usage_02347.pdb 1 ---FTIEPGIYLQG----KFGVRIEDDVALVDKKGIRLT--------------------- 32 usage_00300.pdb --- usage_00307.pdb 30 AIP 32 usage_00681.pdb --- usage_00778.pdb --- usage_01109.pdb --- usage_01110.pdb --- usage_01139.pdb --- usage_01140.pdb --- usage_01156.pdb --- usage_01207.pdb --- usage_01786.pdb --- usage_01817.pdb --- usage_01818.pdb --- usage_01819.pdb --- usage_01820.pdb --- usage_02211.pdb --- usage_02347.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################