################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:12 2021 # Report_file: c_1401_18.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00363.pdb # 4: usage_00368.pdb # 5: usage_00369.pdb # 6: usage_00374.pdb # 7: usage_00441.pdb # 8: usage_00550.pdb # 9: usage_00551.pdb # 10: usage_00552.pdb # 11: usage_00553.pdb # 12: usage_00763.pdb # 13: usage_00764.pdb # 14: usage_00816.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 61 ( 45.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 61 ( 54.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00042.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00363.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00368.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00369.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00374.pdb 1 ----PELYATFVSSSPSNDPA---AAAAVDALVEAFIEEKERGAAG-------------- 39 usage_00441.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00550.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00551.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00552.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00553.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00763.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 45 usage_00764.pdb 1 ------GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAA- 44 usage_00816.pdb 1 QGRD--GTVHKVVYGL-----MSGDSSALQGQIDALLKAVDP----SLSINSTFDQLAAA 49 gtvhkVvygl dssAlqgqidAllkavdp usage_00041.pdb 46 G 46 usage_00042.pdb 46 G 46 usage_00363.pdb 46 G 46 usage_00368.pdb 46 G 46 usage_00369.pdb 46 G 46 usage_00374.pdb - usage_00441.pdb 46 G 46 usage_00550.pdb 46 G 46 usage_00551.pdb 46 G 46 usage_00552.pdb 46 G 46 usage_00553.pdb 46 G 46 usage_00763.pdb 46 G 46 usage_00764.pdb - usage_00816.pdb 50 G 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################