################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:03 2021 # Report_file: c_1442_1512.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_02080.pdb # 2: usage_03737.pdb # 3: usage_04668.pdb # 4: usage_04669.pdb # 5: usage_06731.pdb # 6: usage_07313.pdb # 7: usage_20466.pdb # 8: usage_20991.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 55 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 55 ( 87.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02080.pdb 1 --VIVS-----CG--------S---SAR-------HSV-ID--AAVVGIVD-T-- 24 usage_03737.pdb 1 --HLVS-----IK--------K------N------GNH-VANSPVSIM-VV--Q- 23 usage_04668.pdb 1 --VLVS-----RG--------S---AAR-HIINGTDKP-ID--AAVVA------- 26 usage_04669.pdb 1 --VLVS-----RG--------S---AAR-HIINGTDKP-ID--AAVVA------- 26 usage_06731.pdb 1 --VLANGGHAAIV--------EIDA------------S-TY--ATRV-------- 22 usage_07313.pdb 1 --VLLV-----SG--------S---SAR-Q-----TSP-VD--LCVIG------- 21 usage_20466.pdb 1 -------------ALVSDGVLN---REI-SRA----A--AQ--ALTFV---YP-F 26 usage_20991.pdb 1 GKRIAR-----LI--------D-----------APH--LPE--GEAVFS------ 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################