################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:54:12 2021 # Report_file: c_0620_9.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # 4: usage_00015.pdb # 5: usage_00019.pdb # 6: usage_00028.pdb # 7: usage_00033.pdb # 8: usage_00042.pdb # 9: usage_00043.pdb # 10: usage_00044.pdb # 11: usage_00045.pdb # 12: usage_00048.pdb # 13: usage_00061.pdb # 14: usage_00063.pdb # 15: usage_00077.pdb # 16: usage_00078.pdb # 17: usage_00086.pdb # 18: usage_00098.pdb # 19: usage_00099.pdb # 20: usage_00114.pdb # 21: usage_00115.pdb # 22: usage_00121.pdb # 23: usage_00134.pdb # # Length: 96 # Identity: 3/ 96 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 96 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 96 ( 39.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --DQVSEFKEAFELFDS---ER-TGFITKEGLQTVLKQFGV-RVEPAAFNEMFNEADATG 53 usage_00003.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00006.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00015.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00019.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00028.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00033.pdb 1 -EEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 54 usage_00042.pdb 1 TEEQVTEFKEAFSLFDK---DG-DGCITTRELGTVMRSLGQ-NPTEAELRDMMSEIDRDG 55 usage_00043.pdb 1 LPSKLEGFKEKYMEFDL---NG-NGDIDIMSLKRMLEKLGV-PKTHLELKKLIGEVSSGS 55 usage_00044.pdb 1 ---QIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 52 usage_00045.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00048.pdb 1 SEEMIAEFKAAFDMFDA---DG-GGDISTKELGTVMRMLGQ-NPTKEELDAIIEEVDEDG 55 usage_00061.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00063.pdb 1 ---LSDDKIGLKVLYKLMDVDG-DGKLTKEEVTSFFKKHGI-EK----VAEQVMKADANG 51 usage_00077.pdb 1 --EQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 53 usage_00078.pdb 1 TEEQKNEFKAAFDIFVL---GAEDGSISTKELGKVMRMLGQ-NPTPEELQEMIDEVDEDG 56 usage_00086.pdb 1 TEEQKNEFKAAFDIFVL---GAEDGCISTKELGKVMRMLGQ-NPTPEELQEMIDEVDEDG 56 usage_00098.pdb 1 -EEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 54 usage_00099.pdb 1 TEEQKNEFKAAFDIFVL---GAEDGCISTKELGKVMRMLGQ-NPTPEELQEMIDEVDEDG 56 usage_00114.pdb 1 ---QIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 52 usage_00115.pdb 1 ------EILRAFKVFDA---NG-DGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDG 50 usage_00121.pdb 1 TEEQIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 55 usage_00134.pdb 1 ---QIAEFKEAFSLFDK---DG-DGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADG 52 f G i G e d g usage_00001.pdb 54 NGKIQFPEFLSMMGRR-------------------- 69 usage_00003.pdb 56 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK- 90 usage_00006.pdb 56 NGTIDFPEFLTMM----------------------- 68 usage_00015.pdb 56 NGTIDFPEFLTMM----------------------- 68 usage_00019.pdb 56 DGTIDFPEFLIMMARK-------------------- 71 usage_00028.pdb 56 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV-F-- 88 usage_00033.pdb 55 NGTIDFPEFLTMMARKMKD----------------- 73 usage_00042.pdb 56 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRV-F-D 89 usage_00043.pdb 56 GETFSYPDFLRMMLGK-------------------- 71 usage_00044.pdb 53 NGTIDFPEFLTMMA---------------------- 66 usage_00045.pdb 56 NGTIDFPEFLTMMARK-------------------- 71 usage_00048.pdb 56 SGTIDFEEFLVMMVRQMK------------------ 73 usage_00061.pdb 56 DGTIDFPEFLTMM----------------------- 68 usage_00063.pdb 52 DGYITLEEFLEFSL---------------------- 65 usage_00077.pdb 54 NGTIDFPEFLTMMARK-------------------- 69 usage_00078.pdb 57 SGTVDFDEFLVMMVRS-------------------- 72 usage_00086.pdb 57 SGTVDFDEFLVMMVRCM------------------- 73 usage_00098.pdb 55 NGTIDFPEFLTMM----------------------- 67 usage_00099.pdb 57 SGTVDFDEFLVMMVRCM------------------- 73 usage_00114.pdb 53 NGTIDFPEFLTMMAR--------------------- 67 usage_00115.pdb 51 NGVIDIPEFMDLIKK--------------------- 65 usage_00121.pdb 56 NGTIDFPEFLTMM----------------------- 68 usage_00134.pdb 53 NGTIDFPEFLTMM----------------------- 65 g eFl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################