################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:08:56 2021 # Report_file: c_0101_7.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00027.pdb # 2: usage_00041.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00048.pdb # 6: usage_00049.pdb # 7: usage_00052.pdb # 8: usage_00053.pdb # 9: usage_00054.pdb # 10: usage_00061.pdb # 11: usage_00078.pdb # 12: usage_00079.pdb # 13: usage_00148.pdb # 14: usage_00213.pdb # 15: usage_00214.pdb # 16: usage_00244.pdb # 17: usage_00315.pdb # 18: usage_00316.pdb # 19: usage_00325.pdb # # Length: 257 # Identity: 87/257 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/257 ( 57.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/257 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARR-- 57 usage_00041.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00043.pdb 1 --KDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 56 usage_00044.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00048.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRP- 58 usage_00049.pdb 1 -EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRP- 57 usage_00052.pdb 1 TEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00053.pdb 1 --EDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 56 usage_00054.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00061.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRP- 58 usage_00078.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARR-- 57 usage_00079.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARR-- 57 usage_00148.pdb 1 -PSELRDLLSEFNVLKQ-VNHPHVIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRK- 56 usage_00213.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00214.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00244.pdb 1 -HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 59 usage_00315.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 58 usage_00316.pdb 1 --KDLSDLVSEMEMMKMIGKHKNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRP- 56 usage_00325.pdb 1 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARR-- 57 l dL SE k g H n i LlGACtq dGPL vIV ya GnLr yLR R usage_00027.pdb 58 ----------------EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 101 usage_00041.pdb 59 ---------PGMEVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 109 usage_00043.pdb 57 ----------------EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 100 usage_00044.pdb 59 ---------P-----GEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 104 usage_00048.pdb 59 ---------------EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 103 usage_00049.pdb 58 ---------PG----EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 104 usage_00052.pdb 59 ---------------EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 103 usage_00053.pdb 57 ---------PG----EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 103 usage_00054.pdb 59 ---------P-----EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 104 usage_00061.pdb 59 ---------P-----EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 104 usage_00078.pdb 58 ----------------PQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 101 usage_00079.pdb 58 -----------------QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 100 usage_00148.pdb 57 ----------------RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 100 usage_00213.pdb 59 ----------------PQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV 102 usage_00214.pdb 59 ----------------PQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV 102 usage_00244.pdb 60 FVPYKDLYK-------DFLTLEHLICYSFQVAKGMEFLASRK-IHRDLAARNILLSEKNV 111 usage_00315.pdb 59 ---------------EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 103 usage_00316.pdb 57 ---------P------EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 101 usage_00325.pdb 58 ----------------EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 101 T dL s Q a GMeyLAs K iHRDL ARN Lv E nv usage_00027.pdb 102 MKIADFGLARDINNI----DYYKK-TTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 152 usage_00041.pdb 110 MKIADFGLARDINN-YYKN-------------GRLPVKWMAPEALFDRVYTHQSDVWSFG 155 usage_00043.pdb 101 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 151 usage_00044.pdb 105 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 155 usage_00048.pdb 104 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 154 usage_00049.pdb 105 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 155 usage_00052.pdb 104 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 154 usage_00053.pdb 104 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 154 usage_00054.pdb 105 MRIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 155 usage_00061.pdb 105 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 155 usage_00078.pdb 102 MKIADFGLARDIN-------DYYK--TN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 148 usage_00079.pdb 101 MKIADFGLARDINN-----ID-------YYKTGRLPVKWMAPEALFDRVYTHQSDVWSFG 148 usage_00148.pdb 101 MKISDFGLSRDV--------------------GRIPVKWMAIESLFDHIYTTQSDVWSFG 140 usage_00213.pdb 103 MKIADFGLARDINNI----DYYKK-TTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 153 usage_00214.pdb 103 MKIADFGLARDINNI----DYYKK-TTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 153 usage_00244.pdb 112 VKICDFGLARDI-----------------------PLKWMAPETIFDRVYTIQSDVWSFG 148 usage_00315.pdb 104 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 154 usage_00316.pdb 102 MKIADFGLARDI-NN----IDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 152 usage_00325.pdb 102 MKIADFGLARDINNI----DYYKK-TTN----GRLPVKWMAPEALFDRVYTHQSDVWSFG 152 mkI DFGLaRDi PvKWMApE lFDrvYT QSDVWSFG usage_00027.pdb 153 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 211 usage_00041.pdb 156 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 214 usage_00043.pdb 152 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 210 usage_00044.pdb 156 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 214 usage_00048.pdb 155 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 213 usage_00049.pdb 156 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 214 usage_00052.pdb 155 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 213 usage_00053.pdb 155 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 213 usage_00054.pdb 156 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 214 usage_00061.pdb 156 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 214 usage_00078.pdb 149 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 207 usage_00079.pdb 149 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 207 usage_00148.pdb 141 VLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 199 usage_00213.pdb 154 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 212 usage_00214.pdb 154 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 212 usage_00244.pdb 149 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 208 usage_00315.pdb 155 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 213 usage_00316.pdb 153 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 211 usage_00325.pdb 153 VLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT 211 VL WEIftLGgsPYPGip e elf lLKeGhRM P nct E Y M dCWh PsqRPt usage_00027.pdb 212 FKQLVEDLDRILTLT-- 226 usage_00041.pdb 215 FKQLVEDLDRILTLT-- 229 usage_00043.pdb 211 FKQLVEDLDRILTLT-- 225 usage_00044.pdb 215 FKQLVEDLDRILTLTT- 230 usage_00048.pdb 214 FKQLVEDLDRILTLTT- 229 usage_00049.pdb 215 FKQLVEDLDRILTLTTN 231 usage_00052.pdb 214 FKQLVEDLDRILTLTTN 230 usage_00053.pdb 214 FKQLVEDLDRILTLTTN 230 usage_00054.pdb 215 FKQLVEDLDRILTLTT- 230 usage_00061.pdb 215 FKQLVEDLDRILTLTTN 231 usage_00078.pdb 208 FKQLVEDLDRILTLT-- 222 usage_00079.pdb 208 FKQLVEDLDRILTLT-- 222 usage_00148.pdb 200 FADISKDLEKMMVKR-- 214 usage_00213.pdb 213 FKQLVEDLDRILTLTT- 228 usage_00214.pdb 213 FKQLVEDLDRILTLT-- 227 usage_00244.pdb 209 FSELVEHLGNLLQANA- 224 usage_00315.pdb 214 FKQLVEDLDRILTLTTN 230 usage_00316.pdb 212 FKQLVEDLDRILTLTTN 228 usage_00325.pdb 212 FKQLVEDLDRILTLT-- 226 F lvedL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################