################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:04 2021 # Report_file: c_0545_29.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00123.pdb # 2: usage_00124.pdb # 3: usage_00125.pdb # 4: usage_00173.pdb # 5: usage_00174.pdb # 6: usage_00175.pdb # 7: usage_00955.pdb # 8: usage_00956.pdb # # Length: 168 # Identity: 69/168 ( 41.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/168 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/168 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00124.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00125.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00173.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00174.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00175.pdb 1 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF---SNEEAQKAQALR 57 usage_00955.pdb 1 DTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGL---SEKESKASESFL 57 usage_00956.pdb 1 DTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAA 60 EKLEQ IVKE GTVYFK GKY QA QY KIVSWLE E s e usage_00123.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQK 117 usage_00124.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQK 117 usage_00125.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQK 117 usage_00173.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQK 117 usage_00174.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQK 117 usage_00175.pdb 58 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQK 117 usage_00955.pdb 58 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEK 117 usage_00956.pdb 61 FLNLAMCYLKLR---EYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEK 117 la lnlamc l A E C KAL LDS NEKGL RRGEA L N FE A DF K usage_00123.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAK 165 usage_00124.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA- 164 usage_00125.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA- 164 usage_00173.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEEN--- 162 usage_00174.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEEN--- 162 usage_00175.pdb 118 VLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA- 164 usage_00955.pdb 118 VLEVN----AARLQISMCQKKAKEHNERDRRIYANM------------ 149 usage_00956.pdb 118 VLEVNPQNKAARLQIFMCQKKAKEHNERDRRTYANMFKKFAEQD---- 161 VL AA Q CQ R YANM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################