################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:42:13 2021 # Report_file: c_0095_4.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00003.pdb # 2: usage_00008.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00061.pdb # 7: usage_00062.pdb # 8: usage_00063.pdb # 9: usage_00064.pdb # 10: usage_00065.pdb # 11: usage_00066.pdb # 12: usage_00067.pdb # 13: usage_00068.pdb # 14: usage_00069.pdb # 15: usage_00070.pdb # 16: usage_00071.pdb # 17: usage_00072.pdb # 18: usage_00073.pdb # 19: usage_00074.pdb # 20: usage_00078.pdb # 21: usage_00102.pdb # 22: usage_00103.pdb # # Length: 177 # Identity: 98/177 ( 55.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/177 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/177 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 DLYVERSSASSNCY--PYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGESGACKRG 58 usage_00008.pdb 1 DVFIERPTAVDTCY--PFDVPDYQSLRSILASSGSLEFIAEQFTWNGVKVDGSSSACLRG 58 usage_00058.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00059.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00060.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00061.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00062.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00063.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00064.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00065.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00066.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00067.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00068.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00069.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00070.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00071.pdb 1 DLFIERSNAFSN--CYPYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00072.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00073.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00074.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 usage_00078.pdb 1 DVFIERPTAVDTCY--PFDVPDYQSLRSILASSGSLEFIAEQFTWNGVKVDGSSSACLRG 58 usage_00102.pdb 1 DLFIERSSAFSNCY--PYDIPDYASLRSIVASSGTLEFTAEGFTWTGVTQNGGSGACKRG 58 usage_00103.pdb 1 DLFIERSNAFSNCY--PYDIPDYASLRSIVASSGTVEFTAEGFTWTGVTQNGRSGACKRG 58 D fiER A P D PDY SLRSi ASSG EF aE FTW GV G S AC RG usage_00003.pdb 59 PANGFFSRLNWLTKSG-SVYPL-LNVTMPNNDNF-DKLYVWGVHHPSTNQEQTNLYVQAS 115 usage_00008.pdb 59 GRNSFFSRLNWLTKATNGNYGP-INVTKENTGSY-VRLYLWGVHHPSSDNEQTDLYKVAT 116 usage_00058.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00059.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00060.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00061.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00062.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00063.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00064.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00065.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00066.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00067.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00068.pdb 59 SADSFFSRLNWLTKSG-NSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00069.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00070.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00071.pdb 59 SADSFFSRLNWLTKSG-SSYP-TLNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00072.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKN-FDKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00073.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00074.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 usage_00078.pdb 59 GRNSFFSRLNWLTKATNGNYGP-INVTKENTGSY-VRLYLWGVHHPSSDNEQTDLYKVAT 116 usage_00102.pdb 59 SADSFFSRLNWLTKSG-NSYPI-LNVTMPNNKNF-DKLYIWGIHHPSSNKEQTKLYIQES 115 usage_00103.pdb 59 SADSFFSRLNWLTKSG-SSYPT-LNVTMPNNKNF-DKLYIWGIHHPSSNQEQTKLYIQES 115 sFFSRLNWLTK Y NVT N LY WG HHPSs EQT LY usage_00003.pdb 116 GRVTVSTRRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00008.pdb 117 GRVTVSTRSDQISIVPNIGSRPRVRNQSGRISIYWTLVNPGDSIIFNSIGNLIAPRG 173 usage_00058.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPR- 171 usage_00059.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPR- 171 usage_00060.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPR- 171 usage_00061.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00062.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00063.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00064.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPR- 171 usage_00065.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00066.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00067.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00068.pdb 116 GRVTVSTKRSQQTIIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00069.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00070.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00071.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00072.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00073.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00074.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00078.pdb 117 GRVTVSTRSDQISIVPNIGSRPRVRNQSGRISIYWTLVNPGDSIIFNSIGNLIAPRG 173 usage_00102.pdb 116 GRVTVSTERSQQTVIPNIGSRPWVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 usage_00103.pdb 116 GRVTVSTKRSQQTIIPNIGSRPLVRGQSGRISIYWTIVKPGDILMINSNGNLVAPRG 172 GRVTVST Q PNIGSRP VR QSGRISIYWT V PGD NS GNL APR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################