################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:47 2021 # Report_file: c_0852_64.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00114.pdb # 2: usage_00115.pdb # 3: usage_00116.pdb # 4: usage_00117.pdb # 5: usage_00118.pdb # 6: usage_00120.pdb # 7: usage_00121.pdb # 8: usage_00325.pdb # 9: usage_00388.pdb # 10: usage_00389.pdb # 11: usage_00391.pdb # 12: usage_00487.pdb # # Length: 84 # Identity: 15/ 84 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 84 ( 60.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 84 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 GKWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 58 usage_00115.pdb 1 GKWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 58 usage_00116.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00117.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00118.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00120.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00121.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00325.pdb 1 SLAEMVSRIEEDIKSFA-----DDETVVINVASTEPLPNYSEEYHGSLEGFERMIDEDRK 55 usage_00388.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00389.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH- 57 usage_00391.pdb 1 -KLEHLEHIRADIRKFKQEHELEC-VIVLWTANTERYTDVRQGLNATADEIMESIRVNE- 57 usage_00487.pdb 1 -KWTHLQRIRRDIQNFKEENALDK-VIVLWTANTERYVEVSPGVNDT-ENLLQSIKNDH- 56 k hl rIr DI Fk d viVlwtAnTEry vs g n t e sI d usage_00114.pdb 59 EEIAPSTIFAAASILEGVPYINGS 82 usage_00115.pdb 59 EEIAPSTIFAAASILEGVPYINGS 82 usage_00116.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00117.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00118.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00120.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00121.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00325.pdb 56 EYASASMLYAYAALKLGLPYANFT 79 usage_00388.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00389.pdb 58 EEIAPSTIFAAASILEGVPYINGS 81 usage_00391.pdb 58 DEVSPSNIFAVASILEGAHYINGS 81 usage_00487.pdb 57 EEIAPSTIFAAASILEGVPYINGS 80 ee pS ifA AsileG pYiNgs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################