################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:20 2021 # Report_file: c_0725_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00008.pdb # 5: usage_00011.pdb # 6: usage_00015.pdb # 7: usage_00016.pdb # 8: usage_00017.pdb # 9: usage_00021.pdb # 10: usage_00024.pdb # 11: usage_00038.pdb # # Length: 65 # Identity: 3/ 65 ( 4.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 65 ( 15.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 65 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -MYEYEEITLERGN-SGLGFSIAG-GTD-NPH---D-SSIFITKIITGGAAAQDGRLRVN 52 usage_00002.pdb 1 --YEYEEITLERGN-SGLGFSIAG-GTD-NPHIGDD-SSIFITKIITGGAAAQDGRLRVN 54 usage_00003.pdb 1 --YEYEEITLERGN-SGLGFSIAG-G-----------SSIFITKIITGGAAAQDGRLRVN 45 usage_00008.pdb 1 --MEYEEITLERGN-SGLGFSIAG-GTD-NPHIGDD-PSIFITKIIPGGAAAQDGRLRVN 54 usage_00011.pdb 1 ---KIMEIKLIKGP-KGLGFSIAG-GVG-NQHIPGD-NSIYVTKIIEGGAAHKDGKLQIG 53 usage_00015.pdb 1 ---EYEEITLERGN-SGLGFSIAG-GTD-NPHIGDD-PSIFITKIIPGGAAAQDGRLRVN 53 usage_00016.pdb 1 SMSETFDVELTKNV-QGLGITIAGYI-GD------P-SGIFVKSITKSSAVEHDGRIQIG 51 usage_00017.pdb 1 ----LRTVEMKK----SLGISIAG-GVG-SPL---GDVPIFIAMMHPTGVAAQTQKLRVG 47 usage_00021.pdb 1 --GKFIHTKLRKSS-RGFGFTVVG-GD-----E--PDEFLQIKSLVLDGPAALDGKMETG 49 usage_00024.pdb 1 ----IMEIKLIKGP-KGLGFSIAG-GVG-NQHIPGD-NSIYVTKIIEGGAAHKDGKLQIG 52 usage_00038.pdb 1 ---NIITVTLNMERHHFLGISIVG--Q---SND-RGDGGIYIGSIMKGGAVAADGRIEPG 51 l lG i G i g dg usage_00001.pdb 53 DCILR 57 usage_00002.pdb 55 DCILR 59 usage_00003.pdb 46 DCILR 50 usage_00008.pdb 55 DSILF 59 usage_00011.pdb 54 DKLLA 58 usage_00015.pdb 54 DSILF 58 usage_00016.pdb 52 DQIIA 56 usage_00017.pdb 48 DRIVT 52 usage_00021.pdb 50 DVIVS 54 usage_00024.pdb 53 DKLLA 57 usage_00038.pdb 52 DMLLQ 56 D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################