################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:20 2021 # Report_file: c_1488_91.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_02348.pdb # 2: usage_02349.pdb # 3: usage_02350.pdb # 4: usage_04319.pdb # 5: usage_04805.pdb # 6: usage_04806.pdb # 7: usage_04807.pdb # 8: usage_04808.pdb # 9: usage_05509.pdb # 10: usage_05881.pdb # 11: usage_05882.pdb # 12: usage_07526.pdb # 13: usage_07527.pdb # 14: usage_07528.pdb # 15: usage_07529.pdb # 16: usage_07845.pdb # 17: usage_07846.pdb # 18: usage_08531.pdb # # Length: 59 # Identity: 5/ 59 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 59 ( 55.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 59 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02348.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRRV-------- 44 usage_02349.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 43 usage_02350.pdb 1 -DELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRRV-------- 45 usage_04319.pdb 1 -DELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_04805.pdb 1 -MDLYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_04806.pdb 1 -MDLYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_04807.pdb 1 -MDLYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_04808.pdb 1 -MDLYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_05509.pdb 1 -DPLRERTELLLADYLGYSAREPGTP-EPAPS-----TPEAAVLRSAAARL----RQIH 48 usage_05881.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDT--MG---RSGATSRKALETLRR--------- 41 usage_05882.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDT--MG---RSGATSRKALETLRR--------- 41 usage_07526.pdb 1 GDELYRQSLEIISRYLREQAT--GAKDT----KPMS-GATSRKALETLRRV-------- 44 usage_07527.pdb 1 -DELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_07528.pdb 1 -DELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_07529.pdb 1 -DELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRR--------- 44 usage_07845.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLR---------- 42 usage_07846.pdb 1 --ELYRQSLEIISRYLREQAT--GAKDTKPMG---RSGATSRKALETLRRVGDGVQRN- 51 usage_08531.pdb 1 --ELYRQSLEIISRYLREQAT--GAK-----------GATSRKALETLRR--------- 35 LyrqsleiisrYLreqAt Gak gatsrkaletlr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################