################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:26:01 2021 # Report_file: c_0212_7.html ################################################################################################ #==================================== # Aligned_structures: 53 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00017.pdb # 4: usage_00050.pdb # 5: usage_00051.pdb # 6: usage_00064.pdb # 7: usage_00065.pdb # 8: usage_00066.pdb # 9: usage_00068.pdb # 10: usage_00069.pdb # 11: usage_00072.pdb # 12: usage_00073.pdb # 13: usage_00074.pdb # 14: usage_00115.pdb # 15: usage_00127.pdb # 16: usage_00128.pdb # 17: usage_00147.pdb # 18: usage_00148.pdb # 19: usage_00178.pdb # 20: usage_00179.pdb # 21: usage_00180.pdb # 22: usage_00185.pdb # 23: usage_00225.pdb # 24: usage_00226.pdb # 25: usage_00227.pdb # 26: usage_00228.pdb # 27: usage_00231.pdb # 28: usage_00232.pdb # 29: usage_00233.pdb # 30: usage_00241.pdb # 31: usage_00245.pdb # 32: usage_00246.pdb # 33: usage_00249.pdb # 34: usage_00250.pdb # 35: usage_00251.pdb # 36: usage_00257.pdb # 37: usage_00258.pdb # 38: usage_00259.pdb # 39: usage_00260.pdb # 40: usage_00261.pdb # 41: usage_00262.pdb # 42: usage_00276.pdb # 43: usage_00277.pdb # 44: usage_00285.pdb # 45: usage_00315.pdb # 46: usage_00316.pdb # 47: usage_00342.pdb # 48: usage_00378.pdb # 49: usage_00379.pdb # 50: usage_00385.pdb # 51: usage_00388.pdb # 52: usage_00389.pdb # 53: usage_00390.pdb # # Length: 108 # Identity: 22/108 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/108 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/108 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -VHLVESGGDLVKPGGSLKLSCAASGFTFSH-YGMSWVRQTPDKRLEWVATIGSRGTYTH 58 usage_00013.pdb 1 -VHLVESGGDLVKPGGSLKLSCAASGFTFSH-YGMSWVRQTPDKRLEWVATIGSRGTYTH 58 usage_00017.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGYSFTG-HWMNWVRQAPGKGLEWVGMIHPSDSETR 58 usage_00050.pdb 1 -VQLVQSGGGLVNPGRSLKLSCAASGFTFSS-YGMSWVRQTPEKRLEWVAAISGGGTYIH 58 usage_00051.pdb 1 --QLVQSGGGLVKPGGSLRLSCAASGFTFSS-YAMSWVRQAPGKGLEWVSAISGSGGSTY 57 usage_00064.pdb 1 --QLVQSGGGLVQPGGSLRLSCAAFGFNFSS-YVMHWVRQAPGQGLEYLSAISSDGETTY 57 usage_00065.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWNGGDSR 57 usage_00066.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWNGGDSR 57 usage_00068.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFSN-YAMSWVRQTPEKRLEWVVSISSGG-SIY 57 usage_00069.pdb 1 --KLVESGGGLVKPGGSLKLSCAASGFTFSN-YAMSWVRQTPEKRLEWVVSISSGG-SIY 56 usage_00072.pdb 1 -VQLSESGGGFVKPGGSLRLSCEASGFTFNN-YAMGWVRQAPGKGLEWVSVTSAHGGSAY 58 usage_00073.pdb 1 --QLVQSGGGVFKPGGSLRLSCEASGFTFTE-YYMTWVRQAPGKGLEWLAYISKNGEYSK 57 usage_00074.pdb 1 --QLVQSGGGVFKPGGSLRLSCEASGFTFTE-YYMTWVRQAPGKGLEWLAYISKNGEYSK 57 usage_00115.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTLDD-YAIGWFRQVPGKEREGVACVK--DGSTY 55 usage_00127.pdb 1 -VKLVESGGGLVQPGGSRKLSCAASGFTFSS-FGMHWVRQAPEKGLEWVAYISSGSSTIY 58 usage_00128.pdb 1 -VKLVESGGGLVQPGGSRKLSCAASGFTFSS-FGMHWVRQAPEKGLEWVAYISSGSSTIY 58 usage_00147.pdb 1 -VQLVESGGGLVQPGGSRKLSCAASGFTFMR-FGMHWVRQAPEKGLEWVAYISSGSSTIY 58 usage_00148.pdb 1 -VQLVESGGGLVQPGGSRKLSCAASGFTFMR-FGMHWVRQAPEKGLEWVAYISSGSSTIY 58 usage_00178.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSS-YAMGWVRQAPGKGPEVVSLISGSGGSTW 58 usage_00179.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSS-YAMGWVRQAPGKGPEVVSLISGSGGSTW 58 usage_00180.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSS-YAMSWVRQAPGKGLEWVSAISGSGGSTY 58 usage_00185.pdb 1 QVQLQESGGGLVQPGGSLRLSCAASGFTFSN-YAMSWVRQAPGKGLEVVSDIGSGGDRIT 59 usage_00225.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFRD-YEMWWVRQAPGKGLERVSAINPQGTRTY 58 usage_00226.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFRD-YEMWWVRQAPGKGLERVSAINPQGTRTY 58 usage_00227.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFRD-YEMWWVRQAPGKGLERVSAINPQGTRTY 58 usage_00228.pdb 1 -VKLVESGGDLVKPGGSLKLSCAASGFSFSS-HGMSWVRQTPDKRLEWVALISRGGSYTY 58 usage_00231.pdb 1 -EQLVESGGGVVQPGGSLRLSCLASGFTFHK-YGMHWVRQAPGKGLEWVALISDDGMRKY 58 usage_00232.pdb 1 --QLVESGGGLAQPGGSLRLSCAASGSTISS-VAVGWYRQTPGNQREWVATSSTSSTTAT 57 usage_00233.pdb 1 -VQLVESGGGLAQPGGSLRLSCAASGSTISS-VAVGWYRQTPGNQREWVATSSTSSTTAT 58 usage_00241.pdb 1 --QLVESGGGLVQPGGSRKLSCAASGFTFSS-FGMHWVRQAPEKGLEWVAYISSDSSNIY 57 usage_00245.pdb 1 -EQLVESGGGVVQPGGSLRLSCLASGFTFHK-YGMHWVRQAPGKGLEWVALISDDGMRKY 58 usage_00246.pdb 1 -EQLVESGGGVVQPGGSLRLSCLASGFTFHK-YGMHWVRQAPGKGLEWVALISDDGMRKY 58 usage_00249.pdb 1 --QLVESGGGVVRPGGSLRLSCAASGFIFEN-YGLTWVRQVPGKGLHWVSGMNWNGGDTR 57 usage_00250.pdb 1 --QLVESGGGVVRPGGSLRLSCAASGFIFEN-YGLTWVRQVPGKGLHWVSGMNWNGGDTR 57 usage_00251.pdb 1 --QLVESGGGLIRPGGSLRLSCKGSGFIFEN-FGFGWVRQGPGKGLEWVSGTNWNGGDSR 57 usage_00257.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 58 usage_00258.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 58 usage_00259.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 58 usage_00260.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 57 usage_00261.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 57 usage_00262.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFSN-SGMIWVRQAPGKGLEWVSYISLSGANTY 57 usage_00276.pdb 1 --QLQESGGGLVQPGGSLRLSCAASGFAFSG-YAMSWVRQAPGKGLEWVSGINRDG-STS 56 usage_00277.pdb 1 --QLQESGGGLVQPGGSLRLSCAASGFAFSG-YAMSWVRQAPGKGLEWVSGINRDG-STS 56 usage_00285.pdb 1 -VQLLVSGGGLVQPGGSLRLSCAASGFTFKA-YPMMWVRQAPGKGLEWVSEISPSGSYTY 58 usage_00315.pdb 1 -VQLVESGGNVVQPGGSLRLSCTASGFSFDD-STMHWVRQAPGKGLQWVSLISWNGGRTY 58 usage_00316.pdb 1 -VQLVESGGNVVQPGGSLRLSCTASGFSFDD-STMHWVRQAPGKGLQWVSLISWNGGRTY 58 usage_00342.pdb 1 QVQLVESGGGLFQPGRSLRLSCVASGFSFNE-KAMHWVRQAPGKGLEWVAIIWYNSIHKN 59 usage_00378.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSS-YAMSWVRQTPEKRLEWVATISSGGSYTS 58 usage_00379.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFTFSS-YAMSWVRQTPEKRLEWVATISSGGSYTS 58 usage_00385.pdb 1 -VKLVESGGGVVQPGGSRKLSCAASGFTFSD-YGMAWVRQAPGKGPEWVTFISNMAYSIY 58 usage_00388.pdb 1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYDG-STN 59 usage_00389.pdb 1 -VQLVESGGNVVQPGGSLRLSCTASGFSFDD-STMHWVRQAPGKGLQWVSLISWNGGRTY 58 usage_00390.pdb 1 -VQLVESGGNVVQPGGSLRLSCTASGFSFDD-STMHWVRQAPGKGLQWVSLISWNGGRTY 58 L SGG PG S LSC sG W RQ P usage_00012.pdb 59 YPDSVKGRFTISRDNDKNALYLQMNSLKSEDTAMYYCARRSEFYYY-- 104 usage_00013.pdb 59 YPDSVKGRFTISRDNDKNALYLQMNSLKSEDTAMYYCARRSE------ 100 usage_00017.pdb 59 YNQKFKDRFTISVDKSKNTLYLQMNSLRAEDTAVYYCARGIYF----- 101 usage_00050.pdb 59 YPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYCTRHP------- 99 usage_00051.pdb 58 YADSVKGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKDLG------ 99 usage_00064.pdb 58 HANSVKGRFTSSRDNSKNTLFLQMGSLRTEDVAVYYCARDRYY----- 100 usage_00065.pdb 58 YGDSVKGRFTISRDNSNNFVYLQMNSLRPEDTAIYYCA---------- 95 usage_00066.pdb 58 YGDSVKGRFTISRDNSNNFVYLQMNSLRPEDTAIYYCARGT------- 98 usage_00068.pdb 58 YLDSVKGRFTVSRDNARNILYLQMTSLRSEDTAMYFCARVS------- 98 usage_00069.pdb 57 YLDSVKGRFTVSRDNARNILYLQMTSLRSEDTAMYFCAR--------- 95 usage_00072.pdb 59 FGEFVKGRFTMSRDHFIDTVYLEMNRLTVEDTAVYYCVRVTF------ 100 usage_00073.pdb 58 YSPSSNGRFTISRDNAKNSVFLQLDRLSADDTAVYYCARADG------ 99 usage_00074.pdb 58 YSPSSNGRFTISRDNAKNSVFLQLDRLSADDTAVYYCARADG------ 99 usage_00115.pdb 56 YADSVKGRFTISRD--NGAVYLQMNSLKPEDTAVYYCA---------- 91 usage_00127.pdb 59 YADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCAR--------- 97 usage_00128.pdb 59 YADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCAR--------- 97 usage_00147.pdb 59 YADTVKGRFTISRDNPKNTLFLQMTSLRSEDTALYYCAR--------- 97 usage_00148.pdb 59 YADTVKGRFTISRDNPKNTLFLQMTSLRSEDTALYYCARSGGIERY-- 104 usage_00178.pdb 59 YDDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC----------- 95 usage_00179.pdb 59 YDDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC----------- 95 usage_00180.pdb 59 YADSVKGRFTISRDNSKNLLYLQMNSLRAEDTAVYYCARHA------- 99 usage_00185.pdb 60 YADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCA---------- 97 usage_00225.pdb 59 YADSVMGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK--------- 97 usage_00226.pdb 59 YADSVMGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK--------- 97 usage_00227.pdb 59 YADSVMGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK--------- 97 usage_00228.pdb 59 YSDSVKGRFTISRDNAKNTLYLQMSGLRSEDTAIYYCTRHKGL----- 101 usage_00231.pdb 59 HSDSMWGRVTISRDNSKNTLYLQFSSLKVEDTAMFFCAREAGGP---- 102 usage_00232.pdb 58 YADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCKT--------- 96 usage_00233.pdb 59 YADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCKT--------- 97 usage_00241.pdb 58 YADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARSNYVG---- 101 usage_00245.pdb 59 HSDSMWGRVTISRDNSKNTLYLQFSSLKVEDTAMFFCAREAGGPIWHD 106 usage_00246.pdb 59 HSDSMWGRVTISRDNSKNTLYLQFSSLKVEDTAMFFCAREAGGPIWHD 106 usage_00249.pdb 58 YADSVRGRFSMSRDNSNNIAYLQMKNLRVDDTALYYCAR--------- 96 usage_00250.pdb 58 YADSVRGRFSMSRDNSNNIAYLQMKNLRVDDTALYYCARGT------- 98 usage_00251.pdb 58 YGDSVKGRFTISRDNSNNFVYLQMNSLRPEDTAIYYCAR--------- 96 usage_00257.pdb 59 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCA---------- 96 usage_00258.pdb 59 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCAKEGW------ 100 usage_00259.pdb 59 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCAKEGW------ 100 usage_00260.pdb 58 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCA---------- 95 usage_00261.pdb 58 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCA---------- 95 usage_00262.pdb 58 YADSVKGRFTISRDNSQNTLSLQMNSLRVEDTAMYYCAK--------- 96 usage_00276.pdb 57 YTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCA---------- 94 usage_00277.pdb 57 YTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCA---------- 94 usage_00285.pdb 59 YADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC----------- 95 usage_00315.pdb 59 YADSVKGRFTISRDNSKNSLYLQMNSLKTEDTAFYFCAK--------- 97 usage_00316.pdb 59 YADSVKGRFTISRDNSKNSLYLQMNSLKTEDTAFYFCAK--------- 97 usage_00342.pdb 60 YADSVKGRFTISRDNSKNTLYLQMNSLRADDTAVYYCAN--------- 98 usage_00378.pdb 59 YPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCAR--------- 97 usage_00379.pdb 59 YPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCAR--------- 97 usage_00385.pdb 59 YADTVTGRFTISRENAKNTLHLEMSSLRSEDTAMYYCTRAIFDY---- 102 usage_00388.pdb 60 YNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSH------ 101 usage_00389.pdb 59 YADSVKGRFTISRDNSKNSLYLQMNSLKTEDTAFYFCAKDKGDSD--- 103 usage_00390.pdb 59 YADSVKGRFTISRDNSKNSLYLQMNSLKTEDTAFYFCAKDKGDSD--- 103 gR Srd L L DtA C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################