################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:27 2021 # Report_file: c_1445_465.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_01381.pdb # 2: usage_05486.pdb # 3: usage_05641.pdb # 4: usage_12889.pdb # 5: usage_12890.pdb # 6: usage_12891.pdb # 7: usage_12892.pdb # 8: usage_12893.pdb # 9: usage_12894.pdb # 10: usage_12895.pdb # 11: usage_12896.pdb # 12: usage_12897.pdb # 13: usage_12898.pdb # # Length: 21 # Identity: 2/ 21 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 21 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 21 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01381.pdb 1 FPVVLVINCGSSSIKFSVLD- 20 usage_05486.pdb 1 --VVAGIDPGITHLGLGVVA- 18 usage_05641.pdb 1 --MIFVLDVGNTNAVLGVFEE 19 usage_12889.pdb 1 --LILCIDVGNSHIYGGVFD- 18 usage_12890.pdb 1 -SLILCIDVGNSHIYGGV--- 17 usage_12891.pdb 1 ----LCIDVGNSHIYGGVFD- 16 usage_12892.pdb 1 --LILCIDVGNSHIYGGV--- 16 usage_12893.pdb 1 --LILCIDVGNSHIYGGV--- 16 usage_12894.pdb 1 ---ILCIDVGNSHIYGGVFD- 17 usage_12895.pdb 1 --LILCIDVGNSHIYGGVF-- 17 usage_12896.pdb 1 --LILCIDVGNSHIYGGVFD- 18 usage_12897.pdb 1 --LILCIDVGNSHIYGGVF-- 17 usage_12898.pdb 1 --LILCIDVGNSHIYGGVF-- 17 id G gV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################