################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:12 2021 # Report_file: c_0780_138.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00513.pdb # 2: usage_00582.pdb # 3: usage_00583.pdb # 4: usage_00886.pdb # # Length: 62 # Identity: 6/ 62 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 62 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 62 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00513.pdb 1 RVLIVGGGDSAVDWALNLLDT--ARRITLIHRRPQF-RAHEASVKELKAHEEGR--LEVL 55 usage_00582.pdb 1 RVAILGGGDSAVDWALMLEPI--AKEVSIIHRRDKF-RAHEHSVENLHAS---K--VNVL 52 usage_00583.pdb 1 RVAILGGGDSAVDWALMLEPI--AKEVSIIHRRDKF-RAHEHSVENLHAS---K--VNVL 52 usage_00886.pdb 1 RVVTLYQ--GATDVAVSLG--VKP-VGAVESWTQ--KPK-F---EYIKND---LKDTKIV 46 RV ilgg sAvDwAl L a ihrr ra e e l a vl usage_00513.pdb 56 TP 57 usage_00582.pdb 53 TP 54 usage_00583.pdb 53 TP 54 usage_00886.pdb 47 G- 47 t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################