################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:17:06 2021 # Report_file: c_1117_53.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00406.pdb # 2: usage_00407.pdb # 3: usage_00556.pdb # 4: usage_00557.pdb # 5: usage_00558.pdb # 6: usage_00559.pdb # 7: usage_00562.pdb # 8: usage_00627.pdb # 9: usage_00628.pdb # 10: usage_00675.pdb # 11: usage_00676.pdb # 12: usage_00677.pdb # 13: usage_00678.pdb # 14: usage_00792.pdb # 15: usage_00822.pdb # 16: usage_00823.pdb # 17: usage_00979.pdb # 18: usage_00987.pdb # 19: usage_00988.pdb # # Length: 95 # Identity: 66/ 95 ( 69.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 95 ( 72.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 95 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00406.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00407.pdb 1 EAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 59 usage_00556.pdb 1 EAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 59 usage_00557.pdb 1 -----QEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 54 usage_00558.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00559.pdb 1 -----QEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 54 usage_00562.pdb 1 ----RQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 55 usage_00627.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00628.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIG---- 55 usage_00675.pdb 1 ---FRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 56 usage_00676.pdb 1 EAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 59 usage_00677.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00678.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00792.pdb 1 EAAFRQEGVAVLLAVVIACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEY- 59 usage_00822.pdb 1 EAAFRQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 59 usage_00823.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 usage_00979.pdb 1 -------------CVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEY- 46 usage_00987.pdb 1 --AFRQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEY- 57 usage_00988.pdb 1 -AAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE-Y 58 VVIA WLDVDA TRVLLISSVMLVMIVElLNSAIEAVVDRIG usage_00406.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 92 usage_00407.pdb 60 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 93 usage_00556.pdb 60 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG 94 usage_00557.pdb 55 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG 89 usage_00558.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSH-- 91 usage_00559.pdb 55 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG 89 usage_00562.pdb 56 HELSGRAKDLGSAAVLIAIIDAVITWCILLWSH-- 88 usage_00627.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILL----- 88 usage_00628.pdb 56 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 89 usage_00675.pdb 57 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG 91 usage_00676.pdb 60 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 93 usage_00677.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 92 usage_00678.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 92 usage_00792.pdb 60 HELSGRAKDMGSAAVLIAIIVAVITWCILLWSHF- 93 usage_00822.pdb 60 HELSGRAKDLGSAAVLIAIIDAVITWCILLWSH-- 92 usage_00823.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG 93 usage_00979.pdb 47 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 80 usage_00987.pdb 58 HELSGRAKDLGSAAVLIAIIDAVITWCILLWSHF- 91 usage_00988.pdb 59 HELSGRAKDLGSAAVLIAIIDAVITWAILLWSHF- 92 HELSGRAKDlGSAAVLIAIIdAVITW ILL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################