################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:13 2021 # Report_file: c_0786_125.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00399.pdb # 2: usage_00408.pdb # 3: usage_00733.pdb # 4: usage_00859.pdb # # Length: 77 # Identity: 1/ 77 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 77 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 77 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00399.pdb 1 ----DGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIK 56 usage_00408.pdb 1 KFLRRISFIDAPGH-----EVLMATMLSGAA-LM--DGAILVVAANEPFP--QPQTREHF 50 usage_00733.pdb 1 KFLRRISFIDAPGH-----EVLMATMLSGAA-LM--DGAILVVAANEPFP--QPQTREHF 50 usage_00859.pdb 1 ---PGLLIIDTPGH-----ESFSNLRSRGSS-LC--NIAILVVDIMHG-L--EPQTIESL 46 id pgh e g l ailvv pQtre usage_00399.pdb 57 QFTKGTWAENVPIIPVS 73 usage_00408.pdb 51 VALGIIGVKNLIIVQ-- 65 usage_00733.pdb 51 VALGIIGVKNLIIVQ-- 65 usage_00859.pdb 47 RLLRERKT-PFVVAL-- 60 l n i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################