################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:05 2021 # Report_file: c_0578_43.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00110.pdb # 4: usage_00111.pdb # # Length: 76 # Identity: 20/ 76 ( 26.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 76 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 76 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 MITAFVLIRPRGNRVQALGEAIAELPQVAEVYSVTGPYDLVALVRLKDVEELDDVVTQGI 60 usage_00026.pdb 1 MITAFVLIRPRGNRVQALGEAIAELPQVAEVYSVTGPYDLVALVRLKDVEELDDVVTQGI 60 usage_00110.pdb 1 SMLAFILVKVKAGKYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIG 60 usage_00111.pdb 1 SMLAFILVKVKAGKYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIG 60 AF L A P EVY TG YD V R K EEL usage_00025.pdb 61 LSLEGVERTETLLAF- 75 usage_00026.pdb 61 LSLEGVERTETLLAF- 75 usage_00110.pdb 61 SIPGVEG-THTMI--- 72 usage_00111.pdb 61 SIPGVEG-THTMIVLK 75 T T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################