################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:44 2021 # Report_file: c_1297_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00619.pdb # 2: usage_01706.pdb # 3: usage_01707.pdb # 4: usage_01708.pdb # 5: usage_01709.pdb # 6: usage_01710.pdb # 7: usage_01711.pdb # 8: usage_02851.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 45 ( 37.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 45 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00619.pdb 1 TTENIALWIGERIRDKL-P-PYVKLKRVVLWE---GKDNGVELEW 40 usage_01706.pdb 1 TSESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 40 usage_01707.pdb 1 TSESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 40 usage_01708.pdb 1 TSESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 40 usage_01709.pdb 1 TSESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 40 usage_01710.pdb 1 TSESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 40 usage_01711.pdb 1 -SESIASWLLELLRSRIQPLG-VKVSSVEFLE---TPKSRARVY- 39 usage_02851.pdb 1 -NESINEDIKNYIQRRIKAYG-DLRYSYLV--NKKTPLHPTIIS- 40 EsIa w e r ri p g vk sv tp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################