################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:42 2021 # Report_file: c_1419_34.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00400.pdb # 2: usage_00401.pdb # 3: usage_00402.pdb # 4: usage_00403.pdb # 5: usage_00404.pdb # 6: usage_00405.pdb # 7: usage_00485.pdb # 8: usage_00486.pdb # 9: usage_00487.pdb # 10: usage_00488.pdb # # Length: 53 # Identity: 50/ 53 ( 94.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 53 ( 94.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 53 ( 5.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00400.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 52 usage_00401.pdb 1 PPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 53 usage_00402.pdb 1 PPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 53 usage_00403.pdb 1 PPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 53 usage_00404.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAA-- 50 usage_00405.pdb 1 PPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQ- 52 usage_00485.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 52 usage_00486.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 52 usage_00487.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 52 usage_00488.pdb 1 -PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQG 52 PDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################