################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:00 2021 # Report_file: c_1004_15.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00124.pdb # 2: usage_00129.pdb # 3: usage_00135.pdb # 4: usage_00136.pdb # 5: usage_00137.pdb # 6: usage_00138.pdb # 7: usage_00139.pdb # 8: usage_00153.pdb # 9: usage_00278.pdb # 10: usage_00390.pdb # 11: usage_00391.pdb # 12: usage_00392.pdb # 13: usage_00393.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 62 ( 46.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00124.pdb 1 ----ALKKIRL---V----PST------AIREISLLKELNHPNIVKLLDVIHTENKLYLV 43 usage_00129.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00135.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00136.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00137.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00138.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00139.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00153.pdb 1 ----AVKMLNV-TAPTPQQLQA------FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIV 48 usage_00278.pdb 1 ----------------------ALKIINIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 38 usage_00390.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00391.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00392.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 usage_00393.pdb 1 HTKVAVKTMKPGS-M---SVEA------FLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 49 E l H kl v usage_00124.pdb 44 FE 45 usage_00129.pdb 50 TE 51 usage_00135.pdb 50 TE 51 usage_00136.pdb 50 TE 51 usage_00137.pdb 50 TE 51 usage_00138.pdb 50 TE 51 usage_00139.pdb 50 TE 51 usage_00153.pdb 49 TQ 50 usage_00278.pdb 39 IE 40 usage_00390.pdb 50 TE 51 usage_00391.pdb 50 TE 51 usage_00392.pdb 50 TE 51 usage_00393.pdb 50 TE 51 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################