################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:54:47 2021 # Report_file: c_0147_18.html ################################################################################################ #==================================== # Aligned_structures: 50 # 1: usage_00003.pdb # 2: usage_00040.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00063.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00116.pdb # 9: usage_00117.pdb # 10: usage_00118.pdb # 11: usage_00145.pdb # 12: usage_00146.pdb # 13: usage_00149.pdb # 14: usage_00150.pdb # 15: usage_00156.pdb # 16: usage_00188.pdb # 17: usage_00203.pdb # 18: usage_00219.pdb # 19: usage_00225.pdb # 20: usage_00234.pdb # 21: usage_00235.pdb # 22: usage_00316.pdb # 23: usage_00324.pdb # 24: usage_00325.pdb # 25: usage_00328.pdb # 26: usage_00334.pdb # 27: usage_00365.pdb # 28: usage_00366.pdb # 29: usage_00379.pdb # 30: usage_00389.pdb # 31: usage_00420.pdb # 32: usage_00428.pdb # 33: usage_00431.pdb # 34: usage_00469.pdb # 35: usage_00476.pdb # 36: usage_00477.pdb # 37: usage_00481.pdb # 38: usage_00482.pdb # 39: usage_00486.pdb # 40: usage_00497.pdb # 41: usage_00533.pdb # 42: usage_00564.pdb # 43: usage_00589.pdb # 44: usage_00590.pdb # 45: usage_00656.pdb # 46: usage_00671.pdb # 47: usage_00672.pdb # 48: usage_00703.pdb # 49: usage_00705.pdb # 50: usage_00723.pdb # # Length: 162 # Identity: 16/162 ( 9.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/162 ( 15.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/162 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --QLVESGGGLVQPGGSLRLSCAAS-G-FTLD-DYAIAWFRQAPGKEREGVSGIDSG-D- 53 usage_00040.pdb 1 EVQLVESGGGLVQPGGSLRLSCAAS-G-FTFS-TYAMSWVRQAPGKGLEWVSSINNS-G- 55 usage_00047.pdb 1 QVQLQESGGGLVQAGGSLRLSCAAS-G-SI-FSINSMDWDRQAPGKQRELVATITSG-G- 55 usage_00048.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FTFS-SYGMHWVRQAPGKGLEWVAVISYD-G- 54 usage_00063.pdb 1 --QLQESGGGSVQAGGSLRLSCEAS-G-LS---TTVMAWFRQAPGKEREGVAAIYTG-D- 51 usage_00066.pdb 1 QVQLQESGGGSVQAGGSLRLSCSAS-G-YT----YISGWFRQAPGKEREGVAAIRSS-D- 52 usage_00067.pdb 1 -VQLQESGGGLVQPRGSLKLSCAAS-G-FTFN-TDAMNWVRQAPGKGLEWVARIRSKGFN 56 usage_00116.pdb 1 -VQLVESGGGLVQPGGSLRLSCAAS-G-FTFS-TYAMSWVRQAPGKGLEWVSSINNS-G- 54 usage_00117.pdb 1 -VQLVESGGGLVQPGGSLRLSCVTS-G-FTFR-KFGMSWVRQAPGKGLEWVASIVTG-G- 54 usage_00118.pdb 1 -VQLVESGGGLVQPGGSLRLSCVTS-G-FTFR-KFGMSWVRQAPGKGLEWVASIVTG-G- 54 usage_00145.pdb 1 --QLVETGGGVVQPGRSLRLSCTAS-G-FTFR-DYWMSWVRQAPGKGLEWVADINPD-G- 53 usage_00146.pdb 1 --QLVETGGGVVQPGRSLRLSCTAS-G-FTFR-DYWMSWVRQAPGKGLEWVADINPD-G- 53 usage_00149.pdb 1 --QLVETGGGVVQPGRSLRLSCTAS-G-FTFR-DYWMSWVRQAPGKGLEWVADINPD-G- 53 usage_00150.pdb 1 --QLVETGGGVVQPGRSLRLSCTAS-G-FTFR-DYWMSWVRQAPGKGLEWVADINPD-G- 53 usage_00156.pdb 1 -VQLLESGGGLVQPGGSLRLSCAAS-G-FTFS-AYGMGWVRQAPGKGLEWVSSIGSS-G- 54 usage_00188.pdb 1 QVQLVESGGGLVKPGGSKKLSCAAS-G-FTFS-SYAMEWVRQTPEKRLEWVAYISTG-G- 55 usage_00203.pdb 1 --QLVESGGGLVQPGGSLRLSCAAS-G-FTFS-DYGIAWVRQAPGKGLEWVAFISDL-A- 53 usage_00219.pdb 1 -VQLQESGGGLVQPGGSLRLSCAAS-G-FTFS-DYYMYWVRQAPGKGLEWVATISDG-G- 54 usage_00225.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FTFR-NYAMHWVRQAPGKGLEWVALIKYD-G- 54 usage_00234.pdb 1 --QLLESGGGLVKPGGSLRLSCAAS-G-FTLI-NYRMNWVRQAPGKGLEWVSSISSS-S- 53 usage_00235.pdb 1 --QLLESGGGLVKPGGSLRLSCAAS-G-FTLI-NYRMNWVRQAPGKGLEWVSSISSS-S- 53 usage_00316.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FTFS-VYGMNWVRQAPGKGLEWVAIIWYD-G- 54 usage_00324.pdb 1 -QSVEESGGRLVTPGTPLTLTCTVS-G-FSLS-TYYMSWVRQAPGKGLEWIGIIYPS-G- 54 usage_00325.pdb 1 -QSVEESGGRLVTPGTPLTLTCTVS-G-FSLS-TYYMSWVRQAPGKGLEWIGIIYPS-G- 54 usage_00328.pdb 1 -VQLVESGGGLVQPGRSLRLSCAAS-G-FTFD-DYAMHWVRQAPGKGLEWVSAITWN-S- 54 usage_00334.pdb 1 --QLQESGGGLVPAGGSLRLSCVDSGRTFS---STVMAWFRQAPGKEREFVATIRWS-G- 53 usage_00365.pdb 1 --QLLESGGGLVQPGGSLRLSCAAS-G-FTFS-IYPMFWVRQAPGKGLEWVSWIGPS-G- 53 usage_00366.pdb 1 --QLLESGGGLVQPGGSLRLSCAAS-G-FRF---EDMGWVRQ---KGLEWVSSIYGP-S- 48 usage_00379.pdb 1 --QLKESGGRLVAPGTPLTLTCTVS-G-FDIS-DYAMIWVRQAPGKGLEWIGIIYGV-I- 53 usage_00389.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FTFS-RYGMHWVRQAPGKGLEWVAVMSYD-G- 54 usage_00420.pdb 1 --QLVQSGGGLVQPGGSLRLSCAAS-G-FNFS-SYEMNWVRQAPGKGLEWVSYISSS-G- 53 usage_00428.pdb 1 -VQLVESGGGLIQPGGSLRLSCAAS-G-FALR-MYDMHWVRQTIDKRLEWVSAVGPS-G- 54 usage_00431.pdb 1 -VQLVESGGGLIQPGGSLRLSCAAS-G-FALR-MYDMHWVRQTIDKRLEWVSAVGPS-G- 54 usage_00469.pdb 1 --QLVESGGGVVQPGKSVRLSCVVS-D-FPFS-KYPMYWVRQAPGKGLEWVAAISGD-A- 53 usage_00476.pdb 1 -VQLVESGGGLVQPGGSLRLSCAAS-G-FNFN-DYFMNWVRQAPGKGLEWVAQMRNKNYQ 56 usage_00477.pdb 1 -VQLQESGGGLVQAGGSLRLSCAAS-G-RTFS-SFVMGWFRQAPGKEREFVASISRS-G- 54 usage_00481.pdb 1 --QLVESGGGVVQPGRSLRLSCAAS-G-FTFS-SYGMHWVRQAPGKGLEWVAVIWYD-G- 53 usage_00482.pdb 1 -VQLVESGGGLVKPGGSLRLSCSAS-G-FDFD-NAWMTWVRQPPGKGLEWVGRITGPGEG 56 usage_00486.pdb 1 --QLVESGGGLVQCGGSLRLSCAAS-G-FTFR-NSAMHWVRQAPGKGLEWVSSIWYS-G- 53 usage_00497.pdb 1 --QLVETGGGLIQPGGSLRLSCAAS-G-FTVS-SNYMSWVRQAPGKGLEWVSVIYSG-G- 53 usage_00533.pdb 1 -VQLLESGGGLVQPGGSLRLSCAAS-G-FTFS-SYAMSWVRQAPGKGLEWVSAISGS-G- 54 usage_00564.pdb 1 -VQLVESGGGVVQPGGSLRLSCVAS-G-FSFS-DFGMNWVRQAPGKGLEWVAFVPFD-R- 54 usage_00589.pdb 1 -VTLDESGGGLQTPGGGLSLVCKAS-G-FTLS-SYQMMWVRQAPGKGLEWVAGITSR-G- 54 usage_00590.pdb 1 -VTLDESGGGLQTPGGGLSLVCKAS-G-FTLS-SYQMMWVRQAPGKGLEWVAGITSR-G- 54 usage_00656.pdb 1 -VQLLESGGGLVQPGGSLRLSAAAS-G-FTFS-TFSMNWVRQAPGKGLEWVSYISRT-S- 54 usage_00671.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FSFS-HYAMHWVRQAPGKGLEWVAVISYD-G- 54 usage_00672.pdb 1 -VQLVESGGGVVQPGRSLRLSCAAS-G-FSFS-HYAMHWVRQAPGKGLEWVAVISYD-G- 54 usage_00703.pdb 1 -VTLDESGGGLQTPGGALSLVCKAS-G-FTFS-VYDMMWVRQAPSKGLEWVAGIGIT-G- 54 usage_00705.pdb 1 -VQLVESGGGLVQPGGSLRLSCSAS-G-FSFN-SFWMHWVRQVPGKGLVWISFTNNE-G- 54 usage_00723.pdb 1 -VQLVESGGGLVQPGGSLRLSCAAS-G-FTFS-TYGMSWVRQAPGKGLEWVSYISIS-G- 54 e GG g L c S W RQ K e usage_00003.pdb 54 GSAYYADSVKGRFTISSDNAKNTVYLQMNSLRPEDTAVYYCARVRT--G-W--------- 101 usage_00040.pdb 56 RNTFSADSVKGRFTISRDNSKNTLFLVMNSLRAEDTAVYYCAKDLR--L----------- 102 usage_00047.pdb 56 -STNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANVK--T----------- 101 usage_00048.pdb 55 SNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGS-------------- 100 usage_00063.pdb 52 GFPYYADSVKGRFTISQDNAKNRMYLQMNSLEPEDTAMYYCAAKTG--A-F--------- 99 usage_00066.pdb 53 GTTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAATEV--A-G--------- 100 usage_00067.pdb 57 FATYYADSVRDRFTISRDDSQSMLYLQMNNLKTEDTGIYYCVRGRD--G----------- 103 usage_00116.pdb 55 RNTFSADSVKGRFTISRDNSKNTLFLVMNSLRAEDTAVYYCAKDLR--L----------- 101 usage_00117.pdb 55 RKTYYSDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGYS--S----------- 101 usage_00118.pdb 55 RKTYYSDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGYS--S----------- 101 usage_00145.pdb 54 ITRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCAREFH--S----------- 100 usage_00146.pdb 54 ITRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCAREFH--S----------- 100 usage_00149.pdb 54 ITRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCAREFH--S----------- 100 usage_00150.pdb 54 ITRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCAREFH--S----------- 100 usage_00156.pdb 55 GGTAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGELL--P----------- 101 usage_00188.pdb 56 GSTYYADSVKGRFTISRDNAKNTLYLQMTSLRSEDTAMYYCARHNYYGG-R--------- 105 usage_00203.pdb 54 YTIYYADTVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDNW-------------- 99 usage_00219.pdb 55 SYTYYPDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCSRYRY--D----------- 101 usage_00225.pdb 55 RNKYYADSVKGRFSISRDNSKNTLYLEMNSLRAEDTAVYYCARDIG--L--------KGE 104 usage_00234.pdb 54 SYIHYADSVKGRFTISRDNAENSLYLQMNSLRAEDTAVYYCVREGP--R-A--------- 101 usage_00235.pdb 54 SYIHYADSVKGRFTISRDNAENSLYLQMNSLRAEDTAVYYCVREGP--R-A--------- 101 usage_00316.pdb 55 DNQYYADSVKGRFTISRDNSKNTLYLQMNGLRAEDTAVYYCARDLR--T----------- 101 usage_00324.pdb 55 -STYCASWAKGRFTISKAS--TTVDLKITSPTTEDTATYFCARPDN--DGT--------- 100 usage_00325.pdb 55 -STYCASWAKGRFTISKAS--TTVDLKITSPTTEDTATYFCARPDN--DGT--------- 100 usage_00328.pdb 55 GHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSY--L-S--------- 102 usage_00334.pdb 54 GNTYYADSVKGRFTISRDNARNTVYLQMNSLKPEDTAVYYCAGGTY-------------- 99 usage_00365.pdb 54 GITKYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTATYYCAREGH--N----------- 100 usage_00366.pdb 49 GSTYYADSVKGRFTISR----NTLYLQMNSLRAEDTAVYYCAKYTS--P----------- 91 usage_00379.pdb 54 NDLAYAKWAKGRFTISRTS--TTVDLKITSPTTEDTATYFCARGYG--S----------- 98 usage_00389.pdb 55 STKYYADSVKGRFAISRDNPKNTLFLQMNSLRPDDTAVYYCAKGGA--A----------- 101 usage_00420.pdb 54 STIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCRLLWF--G----------- 100 usage_00428.pdb 55 -DTYYADSVKGRFAVSRENAKNSLSLQMNSLTAGDTAIYYCVRSDR--G----------- 100 usage_00431.pdb 55 -DTYYADSVKGRFAVSRENAKNSLSLQMNSLTAGDTAIYYCVRSDR--G----------- 100 usage_00469.pdb 54 WHVVYSNSVQGRFLVSRDNVKNTLYLEMNSLKIEDTAVYRCARMFQ--E-SGPPRLDRWS 110 usage_00476.pdb 57 YGTYYAESLEGRFTISRDDSKNSLYLQMNSLKTEDTAVYYCARESY--Y----------- 103 usage_00477.pdb 55 SVTRYADSAKGRFTISKDNAKNTVSLQMDNLNPDDTAVYYCAADLH--RPY--------- 103 usage_00481.pdb 54 SNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDPR-GA-T--------- 102 usage_00482.pdb 57 WSVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGK--Y----------- 103 usage_00486.pdb 54 SNTYYADSVCGRFTISRDNSKNTLYLQMNSLTAEDTAVYYCARFAG--G----------- 100 usage_00497.pdb 54 -STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYDG--I----------- 99 usage_00533.pdb 55 GSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDDD--Y----------- 101 usage_00564.pdb 55 RINYYAESVRGRFTISRDDSKNTVFLQMDSLRPEDTAIYYCAKHRS--Q-W--------- 102 usage_00589.pdb 55 GVTGYGSAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKPAL--D-S--------- 102 usage_00590.pdb 55 GVTGYGSAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKPAL--D-S--------- 102 usage_00656.pdb 55 KTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYVARGR--------------- 99 usage_00671.pdb 55 ENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRI--V-D--------- 102 usage_00672.pdb 55 ENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRI--V-D--------- 102 usage_00703.pdb 55 -STYYASAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCARGG-----A--------- 99 usage_00705.pdb 55 TTTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARGD--------------- 99 usage_00723.pdb 55 GSTYYTDSVKGRFTISRDNSKNTLSLQINSLRPEDTAVYYCAKEGW-------------- 100 gR S L Dt Y c usage_00003.pdb 102 ----GLNAP----------D------YAMDYWGKGTLVTV-- 121 usage_00040.pdb 103 -------------------G------GGSDYWGQGTLVTV-- 117 usage_00047.pdb 102 -------W--A--------G---M--TR-DYWGQGTQVTVSS 120 usage_00048.pdb 101 --------------------------GLLDYWGQGTLVTVS- 115 usage_00063.pdb 100 ----S--Y--G--------SL-WWMSRAYNHWGQGTQVTVS- 123 usage_00066.pdb 101 -------------------W--PLDIGIYDYWGQGTEVTVS- 120 usage_00067.pdb 104 --------------------------EAMDYWGQGTTLTVS- 118 usage_00116.pdb 102 -------------------G------GGSDYWGQGTLVTV-- 116 usage_00117.pdb 102 ----------T--------S------YAMDYWGQGTLVTVS- 118 usage_00118.pdb 102 ----------T--------S------YAMDYWGQGTLVTVS- 118 usage_00145.pdb 101 -------G--L--------G------WHFDLWGRGTLVTV-- 117 usage_00146.pdb 101 -------G--L--------G------WHFDLWGRGTLVTV-- 117 usage_00149.pdb 101 -------G--L--------G------WHFDLWGRGTLVTV-- 117 usage_00150.pdb 101 -------G--L--------G------WHFDLWGRGTLVTV-- 117 usage_00156.pdb 102 -------------------Y------YGMDVWGQGTTVTV-- 116 usage_00188.pdb 106 -------------------I------YSMDYWGQGTSVTT-- 120 usage_00203.pdb 100 --------------------------DAMDYWGQGTLVTVS- 114 usage_00219.pdb 102 --------------------------DAMDYWGQGTLVTV-- 115 usage_00225.pdb 105 H---Y--D-IL-------TA------YGPDYWGQGALVTV-- 125 usage_00234.pdb 102 ----T-GY--S-------MA------DVFDIWGQGTMVTVS- 122 usage_00235.pdb 102 ----T-GY--S-------MA------DVFDIWGQGTMVTVS- 122 usage_00316.pdb 102 --------------------------GPFDYWGQGTLVTVS- 116 usage_00324.pdb 101 -------S--G----Y---L------SGFGLWGQGTLVTVS- 119 usage_00325.pdb 101 -------S--G----Y---L------SGFGLWGQGTLVTVS- 119 usage_00328.pdb 103 ----------T--------A------SSLDYWGQGTLVTV-- 118 usage_00334.pdb 100 -------------------Y--GTLSYKYDFWGRGTQVTVS- 119 usage_00365.pdb 101 -------------------D------WYFDLWGRGTLVTVS- 116 usage_00366.pdb 92 ------PQ-----------N------HGFDYWGQGTLVTVS- 109 usage_00379.pdb 99 ---------MD-------GY------DRLNLWGQGTLVTVS- 117 usage_00389.pdb 102 -------------------A------AVMDVWGKGTTVTVS- 117 usage_00420.pdb 101 -------------------E------LFFDYWGQGTLVTV-- 115 usage_00428.pdb 101 ----------V--------A------GLFDSWGQGILVTVS- 117 usage_00431.pdb 101 ----------V--------A------GLFDSWGQGILVTV-- 116 usage_00469.pdb 111 GRNY------Y-------YY------SGMDVWGQGTTVTVS- 132 usage_00476.pdb 104 --------------------------GFTSYWGQGTLVTVS- 118 usage_00477.pdb 104 -------------------GPGSQRTDDYDTWGQGTQVTVS- 125 usage_00481.pdb 103 ----L--Y--Y-------YY------YGMDVWGQGTTVTV-- 121 usage_00482.pdb 104 -------Y--DFWSGYPPGE------EYFQDWGRGTLVTVS- 129 usage_00486.pdb 101 -------------------W------GAYDVWGQGTLVTVS- 116 usage_00497.pdb 100 -------------------Y------GELDFWGQGTLVTV-- 114 usage_00533.pdb 102 -------E--E----WP-WY------YGMDVWGQGTMVTVS- 122 usage_00564.pdb 103 ----N-FW--P-------RE------GGLDHWGQGTLVTVS- 123 usage_00589.pdb 103 -------D--Q--------CG-FPEAGCIDAWGHGTEVIV-- 124 usage_00590.pdb 103 -------D--Q--------CG-FPEAGCIDAWGHGTEVIV-- 124 usage_00656.pdb 100 ---------------------------FFDYWGQGTLVTVS- 113 usage_00671.pdb 103 -------D--Y-------YY------YGMDVWGQGATVTVS- 121 usage_00672.pdb 103 -------D--Y-------YY------YGMDVWGQGATVTVS- 121 usage_00703.pdb 100 -------Y--S----I---N-------KLDTWGQGTEVIV-- 116 usage_00705.pdb 100 --------------------------GGLDDWGQGTLVTV-- 113 usage_00723.pdb 101 --------------------------AYFDYWGQGVLVTVS- 115 WG G v v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################