################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:12 2021 # Report_file: c_0183_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00007.pdb # 4: usage_00043.pdb # 5: usage_00052.pdb # # Length: 157 # Identity: 48/157 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/157 ( 70.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/157 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 EVGMVFQRFNLFPH-----MTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHA 55 usage_00005.pdb 1 -VGMVFQRFNLFPH-----MTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHA 54 usage_00007.pdb 1 -IGMIFQNPD----NQFVGATVEDDVAFGLE-NRQISRDEMVPRVQAALAQVGMTSFAQR 54 usage_00043.pdb 1 EVGMVFQQFNLFPH-----MTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARK 55 usage_00052.pdb 1 EVGMVFQQFNLFPH-----MTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARK 55 vGMvFQ fn mTVl n tlapm vR wpRekae ka elL VG d A usage_00004.pdb 56 YPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVV 114 usage_00005.pdb 55 YPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVV 113 usage_00007.pdb 55 EPSSLSGGQKQRVALAGIVAIAPKILILDEATSMLDPQGRIEMLAIVRQLRQQQNLTVIS 114 usage_00043.pdb 56 YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVV 114 usage_00052.pdb 56 YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVV 114 yP LSGGQ QRVAiAralAmePKImlfDEpTSaLDPemvgEvL vm La gmTmvv usage_00004.pdb 115 VTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRP- 150 usage_00005.pdb 114 VTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRP- 149 usage_00007.pdb 115 ITHDIDEAAS-ADRVLVIDDGRLVDEAVPSQIFER-G 149 usage_00043.pdb 115 VTHEMGFAREVADRVVFMDGGQIVEEGRPEEI----- 146 usage_00052.pdb 115 VTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFT--- 148 vTHemgfAre DRV fmDgG i eEg Pe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################