################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:17 2021 # Report_file: c_1141_12.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00292.pdb # 2: usage_00342.pdb # 3: usage_00343.pdb # 4: usage_00344.pdb # 5: usage_00539.pdb # 6: usage_00540.pdb # 7: usage_00541.pdb # 8: usage_00542.pdb # # Length: 122 # Identity: 49/122 ( 40.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/122 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 73/122 ( 59.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00292.pdb 1 EDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 60 usage_00342.pdb 1 -----------------KKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 43 usage_00343.pdb 1 -----------------KKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 43 usage_00344.pdb 1 ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 42 usage_00539.pdb 1 ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 42 usage_00540.pdb 1 ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 42 usage_00541.pdb 1 ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 42 usage_00542.pdb 1 ------------------KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN 42 KENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQN usage_00292.pdb 61 LELIQNG----------------------------------------------------- 67 usage_00342.pdb 44 LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 103 usage_00343.pdb 44 LELIQNGVENLSQEESKSLL-QIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 102 usage_00344.pdb 43 LELIQNGVENLSQEESKSLLQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNK 102 usage_00539.pdb 43 LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 102 usage_00540.pdb 43 LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 102 usage_00541.pdb 43 LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 102 usage_00542.pdb 43 LELIQNGVENLSQEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFN 102 LELIQNG usage_00292.pdb -- usage_00342.pdb 104 K- 104 usage_00343.pdb 103 KY 104 usage_00344.pdb 103 Y- 103 usage_00539.pdb 103 K- 103 usage_00540.pdb 103 K- 103 usage_00541.pdb 103 K- 103 usage_00542.pdb 103 K- 103 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################