################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:42 2021 # Report_file: c_1476_163.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00048.pdb # 4: usage_00049.pdb # 5: usage_00050.pdb # 6: usage_00052.pdb # 7: usage_00053.pdb # 8: usage_00973.pdb # 9: usage_00974.pdb # 10: usage_02257.pdb # 11: usage_02601.pdb # 12: usage_02602.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 28 ( 53.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 28 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00047.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00048.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00049.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00050.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00052.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00053.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00973.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_00974.pdb 1 --SQQ-RAAQDLVRKLANWRKNQPVIHN 25 usage_02257.pdb 1 SDEMRAN-FKLMRSLDVHT--------- 18 usage_02601.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 usage_02602.pdb 1 -TSQQ-RAAQDLVRKLANWRKNQPVIHN 26 sqq r aqdlvrklanw #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################