################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:09:51 2021 # Report_file: c_0411_1.html ################################################################################################ #==================================== # Aligned_structures: 25 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00008.pdb # 7: usage_00009.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # 10: usage_00017.pdb # 11: usage_00026.pdb # 12: usage_00027.pdb # 13: usage_00028.pdb # 14: usage_00039.pdb # 15: usage_00040.pdb # 16: usage_00041.pdb # 17: usage_00042.pdb # 18: usage_00043.pdb # 19: usage_00049.pdb # 20: usage_00050.pdb # 21: usage_00053.pdb # 22: usage_00054.pdb # 23: usage_00058.pdb # 24: usage_00059.pdb # 25: usage_00061.pdb # # Length: 122 # Identity: 24/122 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/122 ( 48.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/122 ( 29.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -----ENYELVDE-GG---------SGTVRHVTFDIS-EGDLRYLEGQSIGIIPPGEDK- 43 usage_00002.pdb 1 -----ENYELVDE-GG---------SGTVRHVTFDIS-EGDLRYLEGQSIGIIPPGEDK- 43 usage_00003.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00006.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00007.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00008.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00009.pdb 1 -----SNVLLTPETGTGKRPKKEGE-ALVHRIVLAIDHS-AYPYVIGQSGGVIPPGEDPE 53 usage_00015.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00016.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00017.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00026.pdb 1 IGKVISNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 48 usage_00027.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00028.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00039.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00040.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00041.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00042.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00043.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00049.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00050.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00053.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00054.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00058.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 usage_00059.pdb 1 IGKVISNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 48 usage_00061.pdb 1 -----SNEPLVKE-GG---------IGIVQHIKFDLT-GGNLKYIEGQSIGIIPPGVDK- 43 N Lv E Gg g V h fd l Y eGQSiGiIPPG Dk usage_00001.pdb 44 ----NGKPHKLRLYSIASTRH-GDMEDNKTVSLCVRQLEYQDPES-GE-TVYGVCSTYLC 96 usage_00002.pdb 44 ----NGKPHKLRLYSIASTRH-GDMEDNKTVSLCVRQLEYQDPES-GE-TVYGVCSTYLC 96 usage_00003.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00006.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00007.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00008.pdb 44 ----NGKPEQLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00009.pdb 54 KKAKD-VGYTVRLYSIASPSYM----KEDNIEFIIKRDNIYDENGNI--QFKGVCSNYMC 106 usage_00015.pdb 44 ----NGKPEELRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00016.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00017.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00026.pdb 49 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 101 usage_00027.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00028.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00039.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00040.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00041.pdb 44 ----NGKPEKLRLYAIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00042.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00043.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00049.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00050.pdb 44 ----NGKPERLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00053.pdb 44 ----NGKPEKLRDYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00054.pdb 44 ----NGKPEKDRDYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00058.pdb 44 ----NGKPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 96 usage_00059.pdb 49 ----NGEPEKLRLYSIASTRH-GDDVDDKTISLCVRQLEYKHPES-GE-TVYGVCSTYLT 101 usage_00061.pdb 44 ----NGKPEKLRLFSIASTRH-GDDVDDKTISLCVRQLEYKH------PTVYGVCSTYLT 92 n p R ysIAStrh d kt slcvrqley tvyGVCStYl usage_00001.pdb 97 NL 98 usage_00002.pdb 97 NL 98 usage_00003.pdb 97 HI 98 usage_00006.pdb 97 HI 98 usage_00007.pdb 97 HI 98 usage_00008.pdb 97 HI 98 usage_00009.pdb 107 DL 108 usage_00015.pdb 97 HI 98 usage_00016.pdb 97 HI 98 usage_00017.pdb 97 HI 98 usage_00026.pdb 102 HI 103 usage_00027.pdb 97 HI 98 usage_00028.pdb 97 HI 98 usage_00039.pdb 97 HI 98 usage_00040.pdb 97 HI 98 usage_00041.pdb 97 HI 98 usage_00042.pdb 97 HI 98 usage_00043.pdb 97 HI 98 usage_00049.pdb 97 HI 98 usage_00050.pdb 97 HI 98 usage_00053.pdb 97 HI 98 usage_00054.pdb 97 HI 98 usage_00058.pdb 97 HI 98 usage_00059.pdb 102 HI 103 usage_00061.pdb 93 HI 94 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################