################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:19:28 2021 # Report_file: c_0078_2.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00004.pdb # 2: usage_00010.pdb # 3: usage_00022.pdb # 4: usage_00049.pdb # 5: usage_00050.pdb # 6: usage_00054.pdb # 7: usage_00055.pdb # 8: usage_00058.pdb # 9: usage_00075.pdb # 10: usage_00076.pdb # 11: usage_00079.pdb # 12: usage_00080.pdb # 13: usage_00084.pdb # 14: usage_00087.pdb # 15: usage_00089.pdb # # Length: 186 # Identity: 53/186 ( 28.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/186 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/186 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ----IPLVQAKL-R--NPKYVISAENAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00010.pdb 1 PFTDLRSVQTLV-DGDKLKIKYGAQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERR 59 usage_00022.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00049.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00050.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00054.pdb 1 ----IPMVQAKL----NPKYAVSAENAI-AKSGAFTGEVSMPILKDLGVSWVILGHSERR 51 usage_00055.pdb 1 ----IPMVQAKL----NPKYAVSAENAI-AKSGAFTGEVSMPILKDLGVSWVILGHSERR 51 usage_00058.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00075.pdb 1 ----IPMVQAKL-C--NPKYAVSAENAI-AKSGAFTGEVSMPILKDLGVSWVILGHSERR 52 usage_00076.pdb 1 ----IPMVQAKL-C--NPKYAVSAENAI-AKSGAFTGEVSMPILKDLGVSWVILGHSERR 52 usage_00079.pdb 1 ----LDRLVQAADG---TDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERR 53 usage_00080.pdb 1 ----LDRLVQAADG---TDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERR 53 usage_00084.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00087.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 usage_00089.pdb 1 ----IPLVQAKL-R--NPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERR 52 A a GA TGEvS Lkd gv VilGHSERR usage_00004.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00010.pdb 60 QYHAETDEIVNAKVKAAYKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGLKDLAAEQA 119 usage_00022.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00049.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00050.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00054.pdb 52 TYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAW 111 usage_00055.pdb 52 TYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAW 111 usage_00058.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00075.pdb 53 TYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAW 112 usage_00076.pdb 53 TYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAW 112 usage_00079.pdb 54 QMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQV 113 usage_00080.pdb 54 QMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQV 113 usage_00084.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00087.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 usage_00089.pdb 53 TYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 112 ETD V KV A G I C GE L REA qt vv sQ a L usage_00004.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00010.pdb 120 ESVVIAYEPVWAIGTGKVCGADDAQEVCAAIRGKLAELYSQELADKVRIQYGGSVKSGNV 179 usage_00022.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00049.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00050.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00054.pdb 112 SQIVLAYEPVWAI----VATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNA 167 usage_00055.pdb 112 SQIVLAYEPVWAI---KVATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNA 168 usage_00058.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00075.pdb 113 SQIVLAYEPVWAIGT-KVATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNA 171 usage_00076.pdb 113 SQIVLAYEPVWAIG--KVATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNA 170 usage_00079.pdb 114 KQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNI 173 usage_00080.pdb 114 KQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNI 173 usage_00084.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00087.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 usage_00089.pdb 113 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANA 172 q V AYEP WAI tpe A V R vs g A RI YGGSV N usage_00004.pdb 173 ATLYA- 177 usage_00010.pdb 180 AEIMAK 185 usage_00022.pdb 173 ATLYA- 177 usage_00049.pdb 173 ATLYA- 177 usage_00050.pdb 173 ATLYA- 177 usage_00054.pdb 168 KTLYM- 172 usage_00055.pdb 169 KTLYM- 173 usage_00058.pdb 173 ATLYA- 177 usage_00075.pdb 172 KTLYMK 177 usage_00076.pdb 171 KTLYM- 175 usage_00079.pdb 174 RDFLAQ 179 usage_00080.pdb 174 RDFLAQ 179 usage_00084.pdb 173 ATLYA- 177 usage_00087.pdb 173 ATLYA- 177 usage_00089.pdb 173 ATLYA- 177 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################