################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:50:12 2021 # Report_file: c_0730_32.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00035.pdb # 2: usage_00038.pdb # 3: usage_00095.pdb # 4: usage_00096.pdb # 5: usage_00107.pdb # 6: usage_00108.pdb # 7: usage_00157.pdb # 8: usage_00158.pdb # 9: usage_00160.pdb # 10: usage_00161.pdb # 11: usage_00162.pdb # 12: usage_00163.pdb # 13: usage_00223.pdb # 14: usage_00236.pdb # 15: usage_00237.pdb # 16: usage_00238.pdb # 17: usage_00263.pdb # 18: usage_00264.pdb # 19: usage_00265.pdb # 20: usage_00266.pdb # 21: usage_00267.pdb # 22: usage_00268.pdb # 23: usage_00269.pdb # 24: usage_00270.pdb # 25: usage_00271.pdb # 26: usage_00272.pdb # 27: usage_00273.pdb # 28: usage_00337.pdb # 29: usage_00338.pdb # 30: usage_00339.pdb # 31: usage_00340.pdb # 32: usage_00368.pdb # 33: usage_00369.pdb # 34: usage_00370.pdb # 35: usage_00371.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 42 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 42 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00038.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00095.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVACLFIKRT- 40 usage_00096.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00107.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00108.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00157.pdb 1 NVLIVEDVVG-TGRTMKALLSNIEKYKPNMIKVASLLVKRT- 40 usage_00158.pdb 1 NVLIVEDVVG-TGRTMKALLSNIEKYKPNMIKVASLLVKR-- 39 usage_00160.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00161.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKR-- 38 usage_00162.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00163.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00223.pdb 1 -NV-TLQHIETTWKCSVKLFQFFWPRPV--EYLNIYNLTITE 38 usage_00236.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00237.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00238.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00263.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00264.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00265.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00266.pdb 1 -VLIVEDIID-TGKTMQTLLSLVR--NPKMVKVASLLVKR-- 36 usage_00267.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00268.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00269.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00270.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00271.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00272.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00273.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00337.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00338.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00339.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00340.pdb 1 NVLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 40 usage_00368.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00369.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00370.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKRT- 39 usage_00371.pdb 1 -VLIVEDIID-TGKTMQTLLSLVRQYNPKMVKVASLLVKR-- 38 vl ved Tg tm Lls p kva l kr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################