################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:51 2021 # Report_file: c_0787_97.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00102.pdb # 2: usage_00232.pdb # 3: usage_00698.pdb # 4: usage_01071.pdb # 5: usage_01073.pdb # # Length: 71 # Identity: 8/ 71 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 71 ( 26.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 71 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 GFDIIPY-N----DLPALERALQ-D--PNVAAFMVEPIQGEA-GVVVPDPGYLMGVRELC 51 usage_00232.pdb 1 NTLTTPY-N----DLEAVKALFAENP-GEIAGVILEPIVGNS-GFIVPDAGFLEGLREIT 53 usage_00698.pdb 1 DFLVLPY-N----DAQTARAQIERHG-PEIAVVLVEPMQGAS-GCIPGQPDFLQALRESA 53 usage_01071.pdb 1 NTLTTPY-N----DLEAVKALFAENP-GEIAGVILEPIVGNS-GFIVPDAGFLEGLREIT 53 usage_01073.pdb 1 ---KPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDIC 57 py n D a A EP G s g p g l Re usage_00102.pdb 52 TRHQVLFIADE 62 usage_00232.pdb 54 LEHDALLVFDE 64 usage_00698.pdb 54 TQVGALLVFDE 64 usage_01071.pdb 54 LEHDALLVFDE 64 usage_01073.pdb 58 DEAGIIFIADE 68 l DE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################