################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:47 2021 # Report_file: c_0896_2.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00007.pdb # 2: usage_00170.pdb # 3: usage_00171.pdb # 4: usage_00172.pdb # 5: usage_00203.pdb # 6: usage_00204.pdb # 7: usage_00205.pdb # 8: usage_00206.pdb # 9: usage_00207.pdb # # Length: 133 # Identity: 115/133 ( 86.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/133 ( 88.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/133 ( 3.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 DPVKQARVNSALHFESGVLFARMRFTFERILFFGKSDIPEDRVEYVQKSYELLEDTLVDD 60 usage_00170.pdb 1 DPVKQARVNSALHFESGVLFARMRFIFERILFFGKSDIPEDRVEYVQKSYELLEDTLVDD 60 usage_00171.pdb 1 DPVKQARVNSALHFESGVLFARMRFIFERILFFGKSDIPEDRVEYVQKSYELLEDTLVDD 60 usage_00172.pdb 1 DPVKQARVNSALHFESGVLFARMRFIFERILFFGKSDIPEDRVEYVQKSYELLEDTLVDD 60 usage_00203.pdb 1 DPVQQARVNAALHFESGVLFARMRFIFERIFFYGKSDIPEDRVEYVQKSYRLLEDTLKDD 60 usage_00204.pdb 1 DPVQQARVNAALHFESGVLFARMRFIFERIFFYGKSDIPEDRVEYVQKSYRLLEDTLKDD 60 usage_00205.pdb 1 DPVQQARVNAALHFESGVLFARMRFIFERIFFYGKSDIPEDRVEYVQKSYRLLEDTLKDD 60 usage_00206.pdb 1 -PVQQARVNAALHFESGVLFARMRFIFERILFYGKSDIPEDRIEYVQKSYRLLEDTLKDD 59 usage_00207.pdb 1 DPVQQARVNAALHFESGVLFARMRFIFERILFYGKSDIPEDRIEYVQKSYRLLEDTLKDD 60 PV QARVN ALHFESGVLFARMRFiFERI F GKSDIPEDR EYVQKSY LLEDTL DD usage_00007.pdb 61 FVAGPTMTIADFSCISTVSSIMGVVPLEQSKHPRIYAWIDRLKQLPYYEEVNGGGGTDLG 120 usage_00170.pdb 61 FVAGPTMTIADFSCISTISSIMGVVPLEQSKHPRIYAWIDRLKQLPYYEEANGGGGTDLG 120 usage_00171.pdb 61 FVAGPTMTIADFSCISTISSIMGVVPLEQSKHPRIYAWIDRLKQLPYYEEANGGGGTDLG 120 usage_00172.pdb 61 FVAGPTMTIADFSCISTISSIMGVVPLEQSKHPRIYAWIDRLKQLPYYEEANGGGGTDLG 120 usage_00203.pdb 61 FVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLG 120 usage_00204.pdb 61 FVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLG 120 usage_00205.pdb 61 FVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLG 120 usage_00206.pdb 60 FVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLG 119 usage_00207.pdb 61 FVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLG 120 FVAG MTIADFSCISTiSSIMGVVPLEQS HPRIY WIDRLKQLPYYEEaNGGGGTDLG usage_00007.pdb 121 KFVLAKKEENAKA 133 usage_00170.pdb 121 KFVLAKKEENAKA 133 usage_00171.pdb 121 KFVLAKKEENA-- 131 usage_00172.pdb 121 KFVLAKKEENAKA 133 usage_00203.pdb 121 KFVLAKKEEN--- 130 usage_00204.pdb 121 KFVLAKKEENAK- 132 usage_00205.pdb 121 KFVLAKKEENAKA 133 usage_00206.pdb 120 KFVLAKKEENA-- 130 usage_00207.pdb 121 KFVLAKKEENAKA 133 KFVLAKKEEN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################