################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:39 2021 # Report_file: c_0518_29.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00249.pdb # 2: usage_00464.pdb # 3: usage_00465.pdb # 4: usage_00466.pdb # 5: usage_00467.pdb # 6: usage_00468.pdb # 7: usage_00469.pdb # 8: usage_00470.pdb # 9: usage_00655.pdb # 10: usage_00695.pdb # 11: usage_00696.pdb # # Length: 78 # Identity: 46/ 78 ( 59.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 78 ( 59.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 78 ( 1.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00249.pdb 1 -LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVA 59 usage_00464.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00465.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00466.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00467.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00468.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00469.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00470.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00655.pdb 1 NLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVA 60 usage_00695.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 usage_00696.pdb 1 -LPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIAN 59 L ILDVEG DGVFIGPADLSA GY N HPEVQ IE I IR GKA G L usage_00249.pdb 60 PDMAQQCLAWGANFVAVG 77 usage_00464.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00465.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00466.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00467.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00468.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00469.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00470.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00655.pdb 61 PDMAQQCLAWGANFVAVG 78 usage_00695.pdb 60 EQLAKRYLELGALFVAVG 77 usage_00696.pdb 60 EQLAKRYLELGALFVAVG 77 A L GA FVAVG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################