################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:48 2021 # Report_file: c_0224_9.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00071.pdb # 2: usage_00091.pdb # 3: usage_00092.pdb # 4: usage_00093.pdb # 5: usage_00096.pdb # 6: usage_00097.pdb # 7: usage_00098.pdb # 8: usage_00137.pdb # 9: usage_00178.pdb # 10: usage_00179.pdb # 11: usage_00180.pdb # 12: usage_00181.pdb # # Length: 146 # Identity: 18/146 ( 12.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/146 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/146 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 ----PLVVKPVN---G--VVRVDDRKELEEAVRKV----TGIVAEQFID-GPEFAIETLS 46 usage_00091.pdb 1 ----PLIVKPSHE--SVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 53 usage_00092.pdb 1 ----PLIVKPSH---SVGMSKVDHASELQKALVEAFQ-DSDVLIEKWLS-GPEFTVAILG 51 usage_00093.pdb 1 ----PLIVKPSHEGSSVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 55 usage_00096.pdb 1 ----PLIVKPSH----VGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 51 usage_00097.pdb 1 ----PLIVKPSHEGSSVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 55 usage_00098.pdb 1 ----PLIVKPSHE--SVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 53 usage_00137.pdb 1 PLFV--------------KIKVKSADALPAALIEAVKFDRIVVVEKSIEGGGEYTACIAG 46 usage_00178.pdb 1 ----PLIVKPSH---SVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 52 usage_00179.pdb 1 ----PLIVKPSH----VGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 51 usage_00180.pdb 1 ----PLIVKPSHEGSSVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 55 usage_00181.pdb 1 ----PLIVKPSH---EVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS-GPEFTVAILG 52 kVd a eL Al ea v Ek GpEft ilg usage_00071.pdb 47 IQGNVHVLSIGYKGNSKGPFFEE--------GVYIAPAQLKEETRLAIVKEVTGAVSALG 98 usage_00091.pdb 54 ----DEVLPSIRIQPP--------------KTQYFCPSGLSDESEQQLAALALQAYHALD 95 usage_00092.pdb 52 ----DEVLPSIRIQPP-GVFYDYDAK-LSDKTQYFCPSGLSDESEQQLAALALQAYHALD 105 usage_00093.pdb 56 ----DEVLPSIRIQPP-GVFYDYDAKYLSDKTQYFCPSGLSDESEQQLAALALQAYHALD 110 usage_00096.pdb 52 ----DEVLPSIRIQPP-GVFYDY-----SDKTQYFCPSGLSDESEQQLAALALQAYHALD 101 usage_00097.pdb 56 ----DEVLPSIRIQPP-GVFYDYDAKYLSDKTQYFCPSGLSDESEQQLAALALQAYHALD 110 usage_00098.pdb 54 ----DEVLPSIRIQPP-GVF--------D-KTQYFCPSGLSDESEQQLAALALQAYHALD 99 usage_00137.pdb 47 ----NLDLPVIRIVPA-GE---------N-DTQYLIPCGLTADEEARLKVLARRAFDVLG 91 usage_00178.pdb 53 ----DEVLPSIRIQP---------------KTQYFCPSGLSDESEQQLAALALQAYHALD 93 usage_00179.pdb 52 ----DEVLPSIRIQPP-GVFYDYDA---K-KTQYFCPSGLSDESEQQLAALALQAYHALD 102 usage_00180.pdb 56 ----DEVLPSIRIQPP-GVFYDYDAKYLSDKTQYFCPSGLSDESEQQLAALALQAYHALD 110 usage_00181.pdb 53 ----DEVLPSIRIQPP-GVFYDYDAKYLSDKTQYFCPSGLSDESEQQLAALALQAYHALD 107 vLp iri p tqY P gL e e l la A aL usage_00071.pdb 99 IHQGPAHTELRLDKDGTPYVIEVGA- 123 usage_00091.pdb 96 C-SGWGRVDVMQDRDGHFYLLEVNTS 120 usage_00092.pdb 106 C-SGWGRVDVMQDRDGHFYLLEVNTS 130 usage_00093.pdb 111 C-SGWGRVDVMQDRDGHFYLLEVNTS 135 usage_00096.pdb 102 C-SGWGRVDVMQDRDGHFYLLEVNTS 126 usage_00097.pdb 111 C-SGWGRVDVMQDRDGHFYLLEVNTS 135 usage_00098.pdb 100 C-SGWGRVDVMQDRDGHFYLLEVNT- 123 usage_00137.pdb 92 C-TDWGRADFMLDADGNPYFLEVNTA 116 usage_00178.pdb 94 C-SGWGRVDVMQDRDGHFYLLEVNTS 118 usage_00179.pdb 103 C-SGWGRVDVMQDRDGHFYLLEVNTS 127 usage_00180.pdb 111 C-SGWGRVDVMQDRDGHFYLLEVNTS 135 usage_00181.pdb 108 C-SGWGRVDVMQDRDGHFYLLEVNTS 132 c gwgr d m D DG Y lEVnt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################