################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:23 2021 # Report_file: c_0680_125.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00082.pdb # 2: usage_00498.pdb # 3: usage_00663.pdb # # Length: 102 # Identity: 35/102 ( 34.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/102 ( 56.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/102 ( 43.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 --EPVWKQRLEFDISVCDLPRMARLCFALY--AVV-CPIAWANLMLFDYKDQLKTGERCL 55 usage_00498.pdb 1 --EPVWKQRLEFDISVCDLPRMARLCFALY--AVVDCPIAWANLMLFDYKDQLKTGERCL 56 usage_00663.pdb 1 ND-HIWNEQLEFDINICDLPRMARLCFAVYAV------VAWVNTMVFDFKGQLRSGDVIL 53 pvWkqrLEFDIsvCDLPRMARLCFAlY iAWaNlMlFDyKdQLktGercL usage_00082.pdb 56 YMWPS--------VLLNPAGTVRGNPNTESAAALVIYLPEVA 89 usage_00498.pdb 57 YMWPS--------VLLNPA----------------------- 67 usage_00663.pdb 54 HSWSSFPDELEEM--LNPMGTVQTNPYAENATALHITFP--- 90 ymWpS LNPa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################