################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:31 2021 # Report_file: c_1255_121.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00151.pdb # 2: usage_00246.pdb # 3: usage_00318.pdb # 4: usage_00571.pdb # 5: usage_00572.pdb # 6: usage_00633.pdb # 7: usage_00797.pdb # 8: usage_00798.pdb # 9: usage_00911.pdb # 10: usage_01003.pdb # 11: usage_01004.pdb # 12: usage_01005.pdb # 13: usage_01288.pdb # 14: usage_01430.pdb # 15: usage_01772.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 42 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 42 ( 52.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00151.pdb 1 -----M-ILVTGGAR--SGKSRHAEALIGD--APQVLYIATS 32 usage_00246.pdb 1 --------GYNPPGD--G--ACGYRCLAFMNGA-TVVSA--- 26 usage_00318.pdb 1 --KTIQ-IAIDGPAS--SGKSTVAKIIAKDFGF-TYLDT--- 33 usage_00571.pdb 1 ---AIN-IALDGPAA--AGKSTIAKRVASELSM-IYVDTG-- 33 usage_00572.pdb 1 ---AIN-IALDGPAA--AGKSTIAKRVASELSM-IYVDTG-- 33 usage_00633.pdb 1 ----GI-VTIDGPSA--SGKSSVARRVAAALGV-PYLSS--- 31 usage_00797.pdb 1 ---APV-ITIDGPSG--AGKGTLCKAMAEALQW-HLLDS--- 32 usage_00798.pdb 1 AI-APV-ITIDGPSG--AGKGTLCKAMAEALQW-HLLDS--- 34 usage_00911.pdb 1 -----QVAHLHAPTGSGK--STKVPAAYAAQGY-KVLVLN-- 32 usage_01003.pdb 1 ----GI-VTIDGPSA--SGKSSVARRVAAALGV-PYLSSG-- 32 usage_01004.pdb 1 -------VTIDGPSA--SGKSSVARRVAAALGV-PYLSSG-- 30 usage_01005.pdb 1 -------VTIDGPSA--SGKSSVARRVAAALGV-PYLSSG-- 30 usage_01288.pdb 1 ---SMV-VAVDGPSG--TGKSSVAKELARQLGA-SYLDTG-- 33 usage_01430.pdb 1 -----G-NFE-F-----HDPNALLEKLSLQLGL-IWYFDG-- 27 usage_01772.pdb 1 ---SLV-VAVDGPAG--TGKSSVSRGLARALGA-RYLDTG-- 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################