################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:55 2021 # Report_file: c_0580_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00166.pdb # 2: usage_00203.pdb # 3: usage_00212.pdb # 4: usage_00213.pdb # 5: usage_00311.pdb # 6: usage_00312.pdb # 7: usage_00313.pdb # 8: usage_00314.pdb # 9: usage_00315.pdb # 10: usage_00316.pdb # 11: usage_00317.pdb # # Length: 112 # Identity: 9/112 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/112 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/112 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00166.pdb 1 -MITVFGLKSKL-APRREKLAEVIYNSLHLGLDIPK-G-KHAIRFLCLEKEDFYYPF--- 53 usage_00203.pdb 1 -VYMVYVSQDRLTPSAKHAVAKAITDAHRGLTG--TQHFLAQVNFQEQPAGNVF-L-GGV 55 usage_00212.pdb 1 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 56 usage_00213.pdb 1 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 56 usage_00311.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00312.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00313.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00314.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00315.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00316.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 usage_00317.pdb 1 -TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPK-Y-LVQVIFNEVEPDSYF-I-AAQ 55 yt r ak AeaItdahh l k l qv F e e f usage_00166.pdb 54 DRSDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIRAHDVEITIKEQP 105 usage_00203.pdb 56 QQGGDTIFVHGLHREGRSADLKGQLAQRIVDDVSVAAEIDRKHIWVYFGEMP 107 usage_00212.pdb 57 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIP 108 usage_00213.pdb 57 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 106 usage_00311.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 105 usage_00312.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 105 usage_00313.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIP 107 usage_00314.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 105 usage_00315.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 105 usage_00316.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIP 107 usage_00317.pdb 56 SASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITE-- 105 s i v r GR e K L rl e lgI vwvyi E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################