################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:27 2021 # Report_file: c_0677_141.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00555.pdb # 2: usage_00657.pdb # 3: usage_00839.pdb # 4: usage_01082.pdb # 5: usage_01129.pdb # # Length: 62 # Identity: 20/ 62 ( 32.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 62 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 62 ( 45.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00555.pdb 1 ADAAPTVSIFPPSSEQLTS---GGASVVCFLNNFYPKDINVKWKIDGS-ERQNGVLNSWT 56 usage_00657.pdb 1 ADAAPTVSIF----------------VVCFLNNFYPKDINVKWK----G-----VLNSWT 35 usage_00839.pdb 1 TVAAPSVFIFPP-------SQLKTASVVCLLNNFYPREAKVQWK-----LQSGNSQESVT 48 usage_01082.pdb 1 TVAAPSVFIFPPSDEQLKS---GTASVVCLLNNFYPREAKVQWKVDNA-LQSGNSQESVT 56 usage_01129.pdb 1 ADAAPTVSIFPPSSEQLTS---GGASVVCFLNNFYPKDINVKWKIDGS-ERQNGVLNSWT 56 AAP V IF VVC LNNFYP V WK S T usage_00555.pdb 57 -D 57 usage_00657.pdb 36 D- 36 usage_00839.pdb -- usage_01082.pdb -- usage_01129.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################