################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:58 2021 # Report_file: c_1262_204.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00311.pdb # 2: usage_00348.pdb # 3: usage_01147.pdb # 4: usage_01148.pdb # 5: usage_01170.pdb # 6: usage_02137.pdb # # Length: 51 # Identity: 1/ 51 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 51 ( 3.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 51 ( 76.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00311.pdb 1 ----------KILAPGIGAQGG--------KAKDAVKAGADYI-IVGR--- 29 usage_00348.pdb 1 ------FTDD---GVGVQ------TASYE--GIEAAKVNKAIVA------- 27 usage_01147.pdb 1 ----------KLVTPGIRPQ--IM------TPEQALSAGVDYM-VIGR--- 29 usage_01148.pdb 1 ----------KLVTPGIRPQ--IM------TPEQALSAGVDYM-VIGR--- 29 usage_01170.pdb 1 FLAVTV------------------------TPRKARALGSDYI-VIGR--- 23 usage_02137.pdb 1 ----------INYPVLTP------NL---KGFEAAVAAGAKEV-VIFGAAS 31 A g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################