################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:58 2021 # Report_file: c_1010_35.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00010.pdb # 2: usage_00196.pdb # 3: usage_00237.pdb # 4: usage_00240.pdb # 5: usage_00241.pdb # 6: usage_00276.pdb # 7: usage_00607.pdb # # Length: 70 # Identity: 26/ 70 ( 37.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 70 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 70 ( 21.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 ---IKFSTEGATSQSYKQFIEALRERLR--GGLIHDIPVLPDPTTLQERNRYITVELSNS 55 usage_00196.pdb 1 ---INFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNH 57 usage_00237.pdb 1 ---INFTTAGATVQSYTNFIRAVRGRLT--ADVRHEIPVLPNRVGLPINQRFILVELSNH 55 usage_00240.pdb 1 ---INFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNH 57 usage_00241.pdb 1 YPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNH 60 usage_00276.pdb 1 YPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNH 60 usage_00607.pdb 1 -PIINFTTAGATVQSYTNFIRAVRGRLT---------V-LPNRVGLPINQRFILVELSNH 49 InFtTaGATvQSYtnFIrAvRgRLt p LPnrvgLpinqRfIlVELSNh usage_00010.pdb 56 DTESIEVGID 65 usage_00196.pdb 58 AELSVTLALD 67 usage_00237.pdb 56 AELSVTLA-- 63 usage_00240.pdb 58 AELSVTLALD 67 usage_00241.pdb 61 AELSVTLALD 70 usage_00276.pdb 61 AELSVTLA-- 68 usage_00607.pdb 50 AELSVTLALD 59 aelSvtla #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################