################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:12:02 2021 # Report_file: c_0673_146.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00277.pdb # 2: usage_00431.pdb # 3: usage_00432.pdb # 4: usage_00433.pdb # 5: usage_00449.pdb # 6: usage_00450.pdb # 7: usage_00451.pdb # 8: usage_00539.pdb # 9: usage_00777.pdb # 10: usage_00785.pdb # 11: usage_00793.pdb # 12: usage_01116.pdb # 13: usage_01117.pdb # 14: usage_01778.pdb # 15: usage_01962.pdb # 16: usage_01963.pdb # # Length: 67 # Identity: 1/ 67 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 67 ( 40.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 67 ( 59.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00277.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00431.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00432.pdb 1 -T-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 44 usage_00433.pdb 1 -T-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 44 usage_00449.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00450.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00451.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00539.pdb 1 ----------------FEVGFIQPGSVKVYSYYNLDEKCTKFYHP----DKGTGLLNKIC 40 usage_00777.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00785.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_00793.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_01116.pdb 1 ---TVLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 43 usage_01117.pdb 1 --ETVLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 44 usage_01778.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_01962.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 usage_01963.pdb 1 ET-VMLSPRSEQTVKSANY-NTPYLSYIND----Y--GGRPVLSFICNGSRCS------- 45 any ntpylSyind y ggrpvlsf srcs usage_00277.pdb 46 ------V 46 usage_00431.pdb 46 ------V 46 usage_00432.pdb 45 ------V 45 usage_00433.pdb 45 ------V 45 usage_00449.pdb 46 ------V 46 usage_00450.pdb 46 ------V 46 usage_00451.pdb 46 ------V 46 usage_00539.pdb 41 IGNVCRC 47 usage_00777.pdb 46 ------V 46 usage_00785.pdb 46 ------V 46 usage_00793.pdb 46 ------V 46 usage_01116.pdb 44 ------V 44 usage_01117.pdb 45 ------V 45 usage_01778.pdb 46 ------V 46 usage_01962.pdb 46 ------V 46 usage_01963.pdb 46 ------V 46 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################