################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:01 2021 # Report_file: c_0100_18.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00006.pdb # # Length: 198 # Identity: 47/198 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 169/198 ( 85.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/198 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 QTSFIFDLDGTLTDSVYQNVAAWKEALDAEN-IP-LAWRIHRKIG-SGGLLKSLSRE--- 54 usage_00003.pdb 1 QTSFIFDLDGTLTDSVYQNVAAWKEALDAEN-IP-LAWRIHRKIG-SGGLLKSLSRETGS 57 usage_00006.pdb 1 -NAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGW---RTYDAIAK--- 52 tsfiFDlDGTltdSvyqnvAaWkealdaen p lawrIHrkiG llkslsre usage_00002.pdb 55 IT----DEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENL-KWCIATSGGIDTA 109 usage_00003.pdb 58 IT----DEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENL-KWCIATSGGIDTA 112 usage_00006.pdb 53 FAPDFA--DEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMA 110 it qaErlsekhaqayErlqhqiIalPGAVeLletLdkenl KWciATSGgiDtA usage_00002.pdb 110 TINLKALKLDI-NKINIVTRDDVSYGKPDPDLFLAAAKKIGAPID-------ECLVIGDA 161 usage_00003.pdb 113 TINLKALKLDI-NKINIVTRDDVSYGKPDPDLFLAAAKKIGAPID-------ECLVIGDA 164 usage_00006.pdb 111 KKWFDILKIKRP--EYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDA 168 tinlkaLKldi inivTrdDVsyGKPdPdlfLaaakkiGaPId eclVigDA usage_00002.pdb 162 IWD-LAARRCKATGVGLL 178 usage_00003.pdb 165 IWD-LAARRCKATGVGLL 181 usage_00006.pdb 169 PAGIAAGKAAGCKIVGIA 186 iwd lAarrckatgVGll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################