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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:56:43 2021
# Report_file: c_0778_40.html
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#====================================
# Aligned_structures: 8
#   1: usage_00085.pdb
#   2: usage_00086.pdb
#   3: usage_00094.pdb
#   4: usage_00097.pdb
#   5: usage_00098.pdb
#   6: usage_00372.pdb
#   7: usage_00394.pdb
#   8: usage_00722.pdb
#
# Length:         75
# Identity:        8/ 75 ( 10.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/ 75 ( 49.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/ 75 ( 30.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00085.pdb         1  GIRMDAVKHM--------PFGWQKSFMAAVNNYK--------PVFTFGEWFLGVNEVSPE   44
usage_00086.pdb         1  GIRMNAVKHM--------PFGWQKSFMAAVNNYK--------PVFTFGQWFLGVNEVSPE   44
usage_00094.pdb         1  GIRVDAVKHM--------PFGWQKSFMATINNYK--------PVFTFGEWFLGVNEISPE   44
usage_00097.pdb         1  GIRVDAVKNM--------PFGWQKSFMATINNYK--------PVFTFGEWFLGVNEISPE   44
usage_00098.pdb         1  GIRVDAVKNM--------PFGWQKSFMATINNYK--------PVFTFGEWFLGVNEISPE   44
usage_00372.pdb         1  GIRVAAVKHM--------PLGWQKSWMSSIYAHK--------PVFTFGEWFLGSAASDAD   44
usage_00394.pdb         1  GLRLDAVKHIYHSETSEENPRFLKMFYEDMNAYYKQKGHTDDF-YMIGEVLSE----YDK   55
usage_00722.pdb         1  GIRMDAVKHM--------PFGWQKSFMAAVNNYK--------PVFTFGEWFLGVNEVSPE   44
                           GiR  AVK m        p gwqKsfm   n yk        p ftfGewflg       

usage_00085.pdb        45  NHKFANESGMSLLD-   58
usage_00086.pdb        45  NHKFANESGMSLLD-   58
usage_00094.pdb        45  YHQFANESGMSLLD-   58
usage_00097.pdb        45  YHQFANESGMSLLD-   58
usage_00098.pdb        45  YHQFANESGMSLLD-   58
usage_00372.pdb        45  NTDFANKSGMSLLDF   59
usage_00394.pdb        56  VAPYY-KGLPALFEF   69
usage_00722.pdb        45  NHKFANESGMSLLD-   58
                              fa  sgmsLld 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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