################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:55:50 2021 # Report_file: c_0489_12.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00050.pdb # 7: usage_00051.pdb # 8: usage_00053.pdb # 9: usage_00054.pdb # 10: usage_00055.pdb # 11: usage_00056.pdb # 12: usage_00057.pdb # 13: usage_00117.pdb # 14: usage_00119.pdb # 15: usage_00121.pdb # 16: usage_00123.pdb # 17: usage_00124.pdb # 18: usage_00125.pdb # 19: usage_00142.pdb # 20: usage_00143.pdb # 21: usage_00179.pdb # 22: usage_00196.pdb # 23: usage_00197.pdb # # Length: 79 # Identity: 3/ 79 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 79 ( 6.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 79 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----------LISNATQN----GTVKLEITQ-NHISAHVNSPEVGKVNEDLDIVSQS--G 43 usage_00002.pdb 1 ----------LLSSATQN----GTVKLEIKD-GVVSAHVHSPEVGKVNEEIDTDQVT--G 43 usage_00047.pdb 1 -VAELIEAIKLVALVA------AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 49 usage_00048.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00049.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00050.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00051.pdb 1 -VAELTEAIKRVALVADR-G--AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 52 usage_00053.pdb 1 --AELTEAIKRVALVADR-G--AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 51 usage_00054.pdb 1 GVAELTEAIKRVALVADR----AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 52 usage_00055.pdb 1 GVAELTEAIKRVALVADR-G--AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 53 usage_00056.pdb 1 -VAELTEAIKRVALVADR-G--AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 52 usage_00057.pdb 1 -VAELTEAIKRVALVADR-G--AQIRMEFSD-DTLKLSAGADDVGRAEEDLPV-DFA--G 52 usage_00117.pdb 1 -ATALKEAVNRVAVLADKNA-NNRVEFLVSE-GTLRLAAEGDY-GRAQDTLSV-TQGGTE 55 usage_00119.pdb 1 ------------AVLADKNA-NNRVEFLVSE-GTLRLAAEGDY-GRAQDTLSV-TQGGTE 44 usage_00121.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00123.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00124.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00125.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00142.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00143.pdb 1 -VAELIEAIKLVALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 52 usage_00179.pdb 1 --------VMVIASKG-S----ESVKFEIEE-NVMRLVSKSPDYGEVVDEVEV-QKE--G 43 usage_00196.pdb 1 --KEFLQAIDRASLLARE-GRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIE--G 55 usage_00197.pdb 1 -----------VALVADR-G--AQVRMEFAD-GSVRLSAGADDVGRAEEDLVV-DYA--G 42 G usage_00001.pdb 44 SDLTISFNPTYLIESLKAI 62 usage_00002.pdb 44 EDLTISFNPTYLIDSLKAL 62 usage_00047.pdb 50 EPLTIAFNPTYLTDGLSSL 68 usage_00048.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00049.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00050.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00051.pdb 53 EPLTIAFNPTYLTDGLGSL 71 usage_00053.pdb 52 EPLTIAFNPTYLTDGLGSL 70 usage_00054.pdb 53 EPLTIAFNPTYLTDGLGSL 71 usage_00055.pdb 54 EPLTIAFNPTYLTDGLGSL 72 usage_00056.pdb 53 EPLTIAFNPTYLTDGLGSL 71 usage_00057.pdb 53 EPLTIAFNPTYLTDGLGSL 71 usage_00117.pdb 56 QAMSLAFNARHVLDAL--- 71 usage_00119.pdb 45 QAMSLAFNARHVLDAL--- 60 usage_00121.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00123.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00124.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00125.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00142.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00143.pdb 53 EPLTIAFNPTYLTDGLSSL 71 usage_00179.pdb 44 EDLVIAFNPKFIEDVLKHI 62 usage_00196.pdb 56 EELNISFSPKYMLDALKVL 74 usage_00197.pdb 43 EPLTIAFNPTYLTDGLSSL 61 Fn d L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################