################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:25 2021 # Report_file: c_0680_85.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00205.pdb # 2: usage_00206.pdb # 3: usage_00207.pdb # 4: usage_00665.pdb # # Length: 66 # Identity: 7/ 66 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/ 66 ( 81.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 66 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00205.pdb 1 VT-VTF-SGQYQISWRSDYEDPAFY--MLKGKLQYELQYRNRGDP-WAVSPRRKLISVDS 55 usage_00206.pdb 1 VT-VTF-SGQYQISWRSDYEDPAFY--MLKGKLQYELQYRNRGDP-WAVSPRRKLISVDS 55 usage_00207.pdb 1 VT-VTF-SGQYQISWRSDYEDPAFY--MLKGKLQYELQYRNRGDP-WAVSPRRKLISVDS 55 usage_00665.pdb 1 --QISTDQDHFLLTWSVAL-GSPQSHWLSPGDLEFEVVYKRLQDSWE--DAAI--LLSNT 53 vtf sgqyqisWrsdy dpafy mlkGkLqyElqYrnrgDp w sprr isvds usage_00205.pdb 56 RSVSLL 61 usage_00206.pdb 56 RSVSLL 61 usage_00207.pdb 56 RSVSLL 61 usage_00665.pdb 54 SQATLG 59 rsvsLl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################