################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:34 2021 # Report_file: c_1038_20.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00187.pdb # 4: usage_00220.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # 7: usage_00223.pdb # 8: usage_00224.pdb # 9: usage_00248.pdb # 10: usage_00249.pdb # 11: usage_00250.pdb # 12: usage_00251.pdb # 13: usage_00252.pdb # 14: usage_00253.pdb # 15: usage_00254.pdb # 16: usage_00255.pdb # 17: usage_00256.pdb # 18: usage_00257.pdb # 19: usage_00258.pdb # 20: usage_00259.pdb # 21: usage_00394.pdb # # Length: 41 # Identity: 18/ 41 ( 43.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 41 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 41 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALS- 40 usage_00105.pdb 1 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSC 41 usage_00187.pdb 1 WGILFSH--DFTPVCTTELGRAAKLAPEFAKRNVKLIALSI 39 usage_00220.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00221.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00222.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00223.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00224.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00248.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00249.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00250.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLS- 40 usage_00251.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00252.pdb 1 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00253.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00254.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLS- 40 usage_00255.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00256.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00257.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00258.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSV 41 usage_00259.pdb 1 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLS- 40 usage_00394.pdb 1 WFILFSHPADFTPVCTTEFYGMQKRVEEFRKLGVEPIGLSV 41 W LFSH DFTPV TTE F gV lI LS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################