################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:07:23 2021 # Report_file: c_0143_2.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00018.pdb # 2: usage_00042.pdb # 3: usage_00070.pdb # 4: usage_00071.pdb # 5: usage_00074.pdb # 6: usage_00075.pdb # 7: usage_00109.pdb # 8: usage_00110.pdb # 9: usage_00111.pdb # 10: usage_00143.pdb # 11: usage_00167.pdb # 12: usage_00284.pdb # 13: usage_00285.pdb # 14: usage_00298.pdb # # Length: 108 # Identity: 57/108 ( 52.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/108 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/108 ( 2.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 IVMTQSPFSMYATLGERVTITCKASQDIYSYLSWLQQKPGKSLKTLIYRANRLITGVPSR 60 usage_00042.pdb 1 IELTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPSR 60 usage_00070.pdb 1 ILMTQSPVSMSLSLGDTVSITCHSSQDISSNIGWLQQAPGKSFKGLIYHGTNLEDGVPGR 60 usage_00071.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQDIISNIGWLQQKPGKSFAGLIYHGTNLSDGVPSR 60 usage_00074.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00075.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00109.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00110.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00111.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00143.pdb 1 IQMTQSPSSLSASLGERVSLTCRASQDIGGNLYWLQQGPDGTIKRLIYATSSLDPGVPKR 60 usage_00167.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00284.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00285.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 usage_00298.pdb 1 ILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSR 60 I mTQSP Sms sLG VsiTC aSQ I sn WLQQ Pgks LIY L GVP R usage_00018.pdb 61 FSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEM--- 105 usage_00042.pdb 61 FSGSGSGADYSLTISSLESEDFADYYCVQYVQFPFTFGSGTKLEI--- 105 usage_00070.pdb 61 FSGSGSGADYSLTISSLSSEDFVDYYCVQYGQFPWTFGGGTSLEIKRA 108 usage_00071.pdb 61 FSGSGSGADYSLTISSLESEDFADYYCVQYAQFPWTFGGGTKLEI--- 105 usage_00074.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00075.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00109.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00110.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00111.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00143.pdb 61 FSGSRSGSDYSLTISSLKSEDFVDYYCLQYSSSPWTFGGGTKLEI--- 105 usage_00167.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00284.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00285.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 usage_00298.pdb 61 FSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEI--- 105 FSGSgSG DYSLTISSL sEDf dYYC QY P TFGgGTkLEi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################