################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:54 2021 # Report_file: c_0559_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00098.pdb # 2: usage_00099.pdb # 3: usage_00111.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00143.pdb # 7: usage_00144.pdb # 8: usage_00152.pdb # # Length: 77 # Identity: 16/ 77 ( 20.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 77 ( 67.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 77 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 AAPVTTGDIVTFFSSALNLSAGAG-SPNNTALNLLSEN-GAYLLHIAFRLQ----ENVIV 54 usage_00099.pdb 1 AAPVTTGDIVTFFSSALNLS---G-SPANTALNLLSEN-GAYLLHIAFRLQ----ENVIV 51 usage_00111.pdb 1 AAPVTTGDIVTFFSSALNLSAGAGSPN-NTALNLLSEN-GAYLLHIAFRLQ----ENVIV 54 usage_00128.pdb 1 AAPVTTGDIVTFFSSAANLNAGAGNPN-NTTLNLFAEN-GAYLLHIAFRLQ----ENVII 54 usage_00129.pdb 1 AAPVTTGDIVTFFSSAANLNAGAGNPN-NTTLNLFAEN-GAYLLHIAFRLQ----ENVII 54 usage_00143.pdb 1 AAPVTTGDIVTFFSSALNLNAGAGNPN-NTTLNLFAEN-GAYLLHIAFRLQ----ENVII 54 usage_00144.pdb 1 -ITFKLGMYLTVGGVV-NS------NAKRFSINVGE-STDSIALHIDHRFSYGADQNTIV 51 usage_00152.pdb 1 AAPVTTGDIVTFFSSALNLNAGAGNPN-NTTLNLFAEN-GAYLLHIAFRLQ----ENVII 54 apvttGdivTffssa Nl nt lNl n gaylLHIafRlq eNvI usage_00098.pdb 55 FNSRQPNAPWLVEQRV- 70 usage_00099.pdb 52 FNSRQPNAPWLVEQRV- 67 usage_00111.pdb 55 FNSRQPNAPWLVEQRVS 71 usage_00128.pdb 55 FNSRQPDGPWLVEQRV- 70 usage_00129.pdb 55 FNSRQPDGPWLVEQRVS 71 usage_00143.pdb 55 FNSRQPDGPWLVEQRV- 70 usage_00144.pdb 52 LNSMV-DDGWQQEQRSK 67 usage_00152.pdb 55 FNSRQPDGPWLVEQRVS 71 fNSrq pWlvEQRv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################