################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:53:00 2021 # Report_file: c_0270_23.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00087.pdb # 2: usage_00088.pdb # 3: usage_00091.pdb # 4: usage_00154.pdb # 5: usage_00158.pdb # 6: usage_00159.pdb # 7: usage_00200.pdb # 8: usage_00201.pdb # # Length: 333 # Identity: 28/333 ( 8.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 94/333 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 161/333 ( 48.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 DSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMALAATT 60 usage_00088.pdb ------------------------------------------------------------ usage_00091.pdb 1 ----------------------------------------SAQLTATYRRLEDLAKQITN 20 usage_00154.pdb 1 -----------------------------------------AGITFAYGRLWTMTEAYVQ 19 usage_00158.pdb 1 DSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMALAATT 60 usage_00159.pdb ------------------------------------------------------------ usage_00200.pdb ------------------------------------------------------------ usage_00201.pdb ------------------------------------------------------------ usage_00087.pdb 61 VGSSLYGNADLKEDILDALDWLYVNSYNSTRSRS---AYNWWHWQLGIPMSLNDIAVLLY 117 usage_00088.pdb 1 -------NADLKEDILDALDWLYVNSYNSTRSRSA---YNWWHWQLGIPMSLNDIAVLLY 50 usage_00091.pdb 21 PHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIE-GS-ANWWDFEIGVPRSITGTLSLMN 78 usage_00154.pdb 20 EGTGATGDPALLADILRGLDHLSATVYHPATTRY----GNWWEWQIGSPRLLMDITAALY 75 usage_00158.pdb 61 VGSSLYGNADLKEDILDALDWLYVNSYNSTRSRS---AYNWWHWQLGIPMSLNDTAVLLY 117 usage_00159.pdb 1 --------ADLKEDILDALDWLYVNSYNSTRSRSA---YNWWHWQLGIPMSLNDTAVLLY 49 usage_00200.pdb 1 -------NADLKEDILDALDWLYVNSYNSTRSRSA---YNWWHWQLGIPMSLNDIAVLLY 50 usage_00201.pdb 1 --------ADLKEDILDALDWLYVNSYNSTRSRSA---YNWWHWQLGIPMSLNDIAVLLY 49 l dil LdwL n Yn r NWW wq G P sl d lly usage_00087.pdb 118 DDISAARMATYMDTIDYFTPS-I--------------GLTGANRAWQAIVVGVRAVIVKD 162 usage_00088.pdb 51 DDISAARMATYMDTIDYFTPS-I---G-----------LTGANRAWQAIVVGVRAVIVKD 95 usage_00091.pdb 79 NYFTDAEIKTYTDPIEHFVPDAE---YFRKTLVNPFK-ALGGNLVDMGRVKIIEGLLRKD 134 usage_00154.pdb 76 DHLGADRVAAACAAVDHFVPD-AMLGAYTG------T-STGANRVDLCRSVALRGVLGRA 127 usage_00158.pdb 118 DDISAARMATYMDTIDYFTPS-I--------------GLTGANRAWQAIVVGVRAVIVKD 162 usage_00159.pdb 50 DDISAARMATYMDTIDYFTPS-I---G-----------LTGANRAWQAIVVGVRAVIVKD 94 usage_00200.pdb 51 DDISAARMATYMDTIDYFTPS-I---G-----------LTGAARAWQAIVVGVRAVIVKD 95 usage_00201.pdb 50 DDISAARMATYMDTIDYFTPS-I---G-----------LTGAARAWQAIVVGVRAVIVKD 94 d aar aty d id F P tGa r vv r v kd usage_00087.pdb 163 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 222 usage_00088.pdb 96 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 155 usage_00091.pdb 135 NTIIEKTSHSLKN--LFTTATKAEGFYADGSYIDHTNVAYTGAYGNVLIDGLTQLLPIIQ 192 usage_00154.pdb 128 PAKIALARDALSP--VFPYVTKGDGLYADGSFVQHTWVAYSGTAGQVMLDGLGRLFTLLA 185 usage_00158.pdb 163 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 222 usage_00159.pdb 95 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 154 usage_00200.pdb 96 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 155 usage_00201.pdb 95 AVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLS 154 k a ar Ls FpyaT gdGfYADGSfvqHT AYtG yG l L ll usage_00087.pdb 223 GSTWSVSDPNQSNVWQWIYEAY-------------------------------------- 244 usage_00088.pdb 156 GSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRS----------YAQDHAV 205 usage_00091.pdb 193 ETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISRE----------AASSHAA 242 usage_00154.pdb 186 GSEWEVTDPGRQLVLDSVEHAYAPLIHDGLVMDTVNGRAISRGYLKSDDLHVMR-SDHFH 244 usage_00158.pdb 223 GSTWSVSDPNQSNVWQWIYEAY-------------------------------------- 244 usage_00159.pdb 155 GSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRS----------YAQDHAV 204 usage_00200.pdb 156 GSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRS----------YAQDHAV 205 usage_00201.pdb 155 GSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRS----------YAQDHAV 204 gs w vsdp V wi ay usage_00087.pdb --------------------------------- usage_00088.pdb 206 GHGIVASIVRLAQFAPAPHAAAFKQIAKRVIQE 238 usage_00091.pdb 243 AVE------------------------------ 245 usage_00154.pdb 245 GQQLIAAMAVLAGGA------------------ 259 usage_00158.pdb --------------------------------- usage_00159.pdb 205 GHGIVASIVRLAQFAPAPHAAAFKQIAKRVIQE 237 usage_00200.pdb 206 GHGIVASIVRLAQFAPAPHAAAFKQIAKRVIQE 238 usage_00201.pdb 205 GHGIVASIVRLAQFAPAPHAAAFKQIAKRVIQE 237 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################