################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:44 2021 # Report_file: c_0219_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # # Length: 137 # Identity: 40/137 ( 29.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/137 ( 42.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/137 ( 19.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -----IVTFQGPDTCTVD-SK------EA--QGSFTFDRVFDMSCKQSDIFDFSIKPTVD 46 usage_00020.pdb 1 NALNIIRMDEASAQVIVDP------------PRTFTFDAVYDQTSCNYGIFQASFKPLID 48 usage_00021.pdb 1 NALNIIRMDEASAQVIVD-PP--------E-PRTFTFDAVYDQTSCNYGIFQASFKPLID 50 usage_00040.pdb 1 ----VVDVDVKLGQVSVK-NPKGTA--HE-MPKTFTFDAVYDWNAKQFELYDETFRPLVD 52 usage_00041.pdb 1 GHEQILTMDVKLGQVTLR-NPRA--APGE-LPKTFTFDAVYDASSKQADLYDETVRPLID 56 usage_00042.pdb 1 ----ILTMDVKLGQVTLR-NPRA--APGE-LPKTFTFDAVYDASSKQADLYDETVRPLID 52 d qv p tFTFDaVyD Pl D usage_00019.pdb 47 DILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPD-GRGVIPRIVEQIFTSILSSAANIEYT 105 usage_00020.pdb 49 AVLEGFNSTIFAYGQTGAGKTWTMGG-N-K---EEPGAIPNSFKHLFDAINSSSSNQNFL 103 usage_00021.pdb 51 AVLEGFNSTIFAYGQTGAGKTWTMGG-N-K---EEPGAIPNSFKHLFDAINSSSSNQNFL 105 usage_00040.pdb 53 SVLQGFNGTIFAYGQTGTGKTYTMEGIR-GDP-EKRGVIPNSFDHIFTHISRSQ-NQQYL 109 usage_00041.pdb 57 SVLQGFNGTVFAYGQTGTGKTYTMQGTW-VEP-ELRGVIPNAFEHIFTHISRSQ-NQQYL 113 usage_00042.pdb 53 SVLQGFNGTVFAYGQTGTGKTYTMQGTW-VEP-ELRGVIPNAFEHIFTHISRSQ-NQQYL 109 vL GfN T FAYGQTG GKt TM G G IPn f h F I S Nq l usage_00019.pdb 106 VRVSYMEIYMERIRD-- 120 usage_00020.pdb 104 VIGSYLELYNEEIRD-- 118 usage_00021.pdb 106 VIGSYLELYNEEIRD-- 120 usage_00040.pdb 110 VRASYLEIYQEEIRDLL 126 usage_00041.pdb 114 VRASYLEIYQEEIRDLL 130 usage_00042.pdb 110 VRASYLEIYQEEIRDLL 126 V SYlE Y EeIRD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################