################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:28 2021 # Report_file: c_0016_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # # Length: 274 # Identity: 268/274 ( 97.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 268/274 ( 97.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/274 ( 2.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RAVLDAQGSVLTNKYAEG-ADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK 59 usage_00002.pdb 1 RAVLDAQGSVLTNKYAEGYADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK 60 usage_00003.pdb 1 RAVLDAQGSVLTNKYAEGY-DEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK 59 usage_00004.pdb 1 RAVLDAQGSVLTNKYA----DEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK 56 RAVLDAQGSVLTNKYA DEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK usage_00001.pdb 60 PGDTVLGMSLFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRA 119 usage_00002.pdb 61 PGDTVLGMSLFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRA 120 usage_00003.pdb 60 PGDTVLGMSLFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRA 119 usage_00004.pdb 57 PGDTVLGMSLFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRA 116 PGDTVLGMSLFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRA usage_00001.pdb 120 IADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAK 179 usage_00002.pdb 121 IADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAK 180 usage_00003.pdb 120 IADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAK 179 usage_00004.pdb 117 IADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAK 176 IADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAK usage_00001.pdb 180 KINSAVF-GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGT 238 usage_00002.pdb 181 KINSAVFPGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGT 240 usage_00003.pdb 180 KINSAV--GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGT 237 usage_00004.pdb 177 KINSAV--GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGT 234 KINSAV GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGT usage_00001.pdb 239 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG 272 usage_00002.pdb 241 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG 274 usage_00003.pdb 238 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG 271 usage_00004.pdb 235 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG 268 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################