################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:28 2021 # Report_file: c_0376_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00110.pdb # # Length: 150 # Identity: 95/150 ( 63.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/150 ( 63.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/150 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 SMTDCEFGYIYRLAQDYLQCVLQIP------SKTSRVLQNVAFSVQKEVEKNLKSCLDNV 54 usage_00017.pdb 1 -SAES-ELHIHSLAEHYLQYVLQVPAF-EAPSQACRVLQRVAFSVQKEVEKNLKSYLDDF 57 usage_00018.pdb 1 SMAESELMHIHSLAEHYLQYVLQVPAFESAPSQACRVLQRVAFSVQKEVEKNLKSYLDDF 60 usage_00019.pdb 1 -MAESELMHIHSLAEHYLQYVLQVP------SQACRVLQRVAFSVQKEVEKNLKSYLDDF 53 usage_00020.pdb 1 -MAESELMHIHSLAEHYLQYVLQVPAFESAPSQACRVLQRVAFSVQKEVEKNLKSYLDDF 59 usage_00110.pdb 1 -------GYIYRLAQDYLQCVLQIPQPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNV 53 I LA YLQ VLQ P S RVLQ VAFSVQKEVEKNLKS LD usage_00016.pdb 55 NVVSVDTARTLFNQVMEKEFEDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEIS 114 usage_00017.pdb 58 HVESIDTARIIFNQV-EKEFEDGIINWGRIVTIFAFGGVLLKKLKQE------SAYKQVS 110 usage_00018.pdb 61 HVESIDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKLKQEQIALDVSAYKQVS 120 usage_00019.pdb 54 HVESIDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKLKQEQIALDVSAYKQVS 113 usage_00020.pdb 60 HVESIDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKLKQEQIALDVSAYKQVS 119 usage_00110.pdb 54 NVVSVDTARTLFNQVMEKEFEDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEIS 113 V S DTAR FNQV EKEFEDGIINWGRIVTIFAF G L KKL YK S usage_00016.pdb 115 YFVAEFIMNNTGEWIRQNGGWENGFVKKFE 144 usage_00017.pdb 111 SFVAEFI-NNTGEWIRQNGGWEDGFIKKFE 139 usage_00018.pdb 121 SFVAEFIMNNTGEWIRQNGGWEDGFIKKF- 149 usage_00019.pdb 114 SFVAEFIMNNTGEWIRQNGGWEDGFIKKFE 143 usage_00020.pdb 120 SFVAEFIMNNTGEWIRQNGGWEDGFIKKF- 148 usage_00110.pdb 114 YFVAEFIMNNTGEWIRQNGGWENGFVKKFE 143 FVAEFI NNTGEWIRQNGGWE GF KKF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################