################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:54 2021 # Report_file: c_0031_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00035.pdb # 2: usage_00112.pdb # 3: usage_00140.pdb # 4: usage_00177.pdb # 5: usage_00178.pdb # 6: usage_00179.pdb # 7: usage_00180.pdb # # Length: 220 # Identity: 64/220 ( 29.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 179/220 ( 81.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/220 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -QKVIGVSISNLDEFLTYQDAKEEAAN-YP--DFEFIFSDAQNDSTQQ-AQVENFISRNV 55 usage_00112.pdb 1 -TKRIGVTVYD-SSFITE--GKEG-DTYAKANNIELVWNSANNDVSTQASQVDSLINQGV 55 usage_00140.pdb 1 -TKRIGVTVYDMSSFITE--GKEGMDTYAKANNIELVWNSANNDVSTQASQVDSLINQGV 57 usage_00177.pdb 1 DTTRIGVTVYDMSSFITA--GKEGMDAYAKDNNIELIWNSANLDVSTQASQVDSMINQGV 58 usage_00178.pdb 1 DTTRIGVTVYDMSSFITA--GKEGMDAYAKDNNIELIWNSANLDVSTQASQVDSMINQGV 58 usage_00179.pdb 1 DTTRIGVTVYDMSSFITA--GKEGMDAYAKDNNIELIWNSANLDVSTQASQVDSMINQGV 58 usage_00180.pdb 1 -TTRIGVTVYDMSSFITA--GKEGMDAYAKDNNIELIWNSANLDVSTQASQVDSMINQGV 57 t rIGVtvyd ssFiT gKEg d ak niEl wnsAn DvstQ sQVds InqgV usage_00035.pdb 56 DAIIVNPVDTTSAVDIV-NVNDAGIPIIIANRTFDGVDQATAFVGSESIQSGLLQ-EEVA 113 usage_00112.pdb 56 DAIIVVPVQADSLGPQVASAKSKGIPLLAVNAALET-PDLAGNVQPDDVAAGAQE-Q--A 111 usage_00140.pdb 58 DAIIVVPVQADSLGPQVASAKSKGIPLLAVNAALET-PDLAGNVQPDDVAAGAQEMQMMA 116 usage_00177.pdb 59 DAIIVVPVQADSLAPQVASAKAKGIPLVPVNAALDS-KDIAGNVQPDDVAAGAQEMQMMA 117 usage_00178.pdb 59 DAIIVVPVQADSLAPQVASAKAKGIPLVPVNAALDS-KDIAGNVQPDDVAAGAQEMQMMA 117 usage_00179.pdb 59 DAIIVVPVQADSLAPQVASAKAKGIPLVPVNAALDS-KDIAGNVQPDDVAAGAQEMQMMA 117 usage_00180.pdb 58 DAIIVVPVQADSLAPQVASAKAKGIPLVPVNAALDS-KDIAGNVQPDDVAAGAQEMQMMA 116 DAIIVvPVqadSl pqV sak kGIPl vNaal d agnVqpddvaaGaqe q A usage_00035.pdb 114 KLLNNEGNIAI-DGELGHEAQI-RTEGNKQIIEEHDGLEVVLQGTAKFDRSEG-RL-ENW 169 usage_00112.pdb 112 DRLGGKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTANWKRDEAVNK-KNW 170 usage_00140.pdb 117 DRLGGKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTANWKRDEAVNKMKNW 176 usage_00177.pdb 118 DRLGGKGNIVILQGPLGQSGELDRSKGIEQVLAKYPDIKVLAKDTANWKRDEAVNKMKNW 177 usage_00178.pdb 118 DRLGGKGNIVILQGPLGQSGELDRSKGIEQVLAKYPDIKVLAKDTANWKRDEAVNKMKNW 177 usage_00179.pdb 118 DRLGGKGNIVILQGPLGQSGELDRSKGIEQVLAKYPDIKVLAKDTANWKRDEAVNKMKNW 177 usage_00180.pdb 117 DRLGGKGNIVILQGPLGQSGELDRSKGIEQVLAKYPDIKVLAKDTANWKRDEAVNKMKNW 176 drLggkGNIvI qGpLG sge R kGi QvlakypdikVlakdTAnwkRdEa nk kNW usage_00035.pdb 170 LNSG-TEIDAVVANNDE-ALGAILALEAVGKLDDVIVAGI 207 usage_00112.pdb 171 ISSFGPQIDGVVAQNDD-GLGALQALKEAGRTGV-PIVGI 208 usage_00140.pdb 177 ISSFGPQIDGVVAQNDDMGLGALQALKEAGRTGV-PIVGI 215 usage_00177.pdb 178 ISGFGPQIDGVVAQNDDMGLGALQALKESGRTGV-PIVGI 216 usage_00178.pdb 178 ISGFGPQIDGVVAQNDDMGLGALQALKESGRTGV-PIVGI 216 usage_00179.pdb 178 ISGFGPQIDGVVAQNDDMGLGALQALKESGRTGV-PIVGI 216 usage_00180.pdb 177 ISGFGPQIDGVVAQNDDMGLGALQALKESGRTGV-PIVGI 215 is f pqIDgVVAqNDd gLGAlqALke Grtgv pivGI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################