################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:31 2021 # Report_file: c_0435_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00014.pdb # 2: usage_00090.pdb # 3: usage_00125.pdb # 4: usage_00189.pdb # 5: usage_00464.pdb # 6: usage_00513.pdb # 7: usage_00567.pdb # 8: usage_00601.pdb # 9: usage_00727.pdb # # Length: 114 # Identity: 24/114 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/114 ( 69.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/114 ( 30.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 GCVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 57 usage_00090.pdb 1 -----GVYTNHKGEKINVAVKTCKKDCTL---DNKEKFMSEAVIMKNLDHPHIVKLIGII 52 usage_00125.pdb 1 ------------GKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 45 usage_00189.pdb 1 ----HGTLLDNDGKKIHCAVKSLNR--------EVSQFLTEGIIMKDFSHPNVLSLLGIC 48 usage_00464.pdb 1 -----GTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 52 usage_00513.pdb 1 GCVYHGTL------KIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 51 usage_00567.pdb 1 -----GTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 52 usage_00601.pdb 1 GCVYHGTLLDNDGKKIHCAVKSLNRITDIQFL-------TEGIIMKDFSHPNVLSLLGIC 53 usage_00727.pdb 1 -CVYHGTLLDNDGKKIHCAVKSLNRITDI---GEVSQFLTEGIIMKDFSHPNVLSLLGIC 56 KIhcAVKslnr tEgiIMKdfsHPnvlsLlGIc usage_00014.pdb 58 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 110 usage_00090.pdb 53 EE--EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN 103 usage_00125.pdb 46 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 98 usage_00189.pdb 49 L-----PLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 96 usage_00464.pdb 53 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK 105 usage_00513.pdb 52 LR---SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 101 usage_00567.pdb 53 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 105 usage_00601.pdb 54 LR---SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 103 usage_00727.pdb 57 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK 109 l plvvlpymkhGdLrnfirne hnptVkdLigfgLQvaKgMkyLaSkk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################