################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:33 2021 # Report_file: c_0809_32.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00077.pdb # 2: usage_00148.pdb # 3: usage_00149.pdb # 4: usage_00153.pdb # 5: usage_00200.pdb # 6: usage_00201.pdb # 7: usage_00260.pdb # 8: usage_00322.pdb # 9: usage_00351.pdb # 10: usage_00352.pdb # 11: usage_00353.pdb # 12: usage_00703.pdb # # Length: 72 # Identity: 59/ 72 ( 81.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 72 ( 81.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 72 ( 18.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 -RAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFY----RGSAHLWF 55 usage_00148.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGAY----RGSAHLWF 56 usage_00149.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGAY----RGSAHLWF 56 usage_00153.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYS-----TGFYRGSAHLWF 55 usage_00200.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFY----RGSAHLWF 56 usage_00201.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFY----RGSAHLWF 56 usage_00260.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGAA----RGSAHLWF 56 usage_00322.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFY----RGSAHLWF 56 usage_00351.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYS---------RGSAHLWF 51 usage_00352.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYS-TGFY----RGSAHLWF 55 usage_00353.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDG------------GSAHLWF 48 usage_00703.pdb 1 TRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFY----RGSAHLWF 56 RAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDG GSAHLWF usage_00077.pdb 56 TDGVLQGKRQWD 67 usage_00148.pdb 57 TDGVLQGKRQWD 68 usage_00149.pdb 57 TDGVLQGKRQWD 68 usage_00153.pdb 56 TDGVLQGKRQWD 67 usage_00200.pdb 57 TDGVLQGKRQWD 68 usage_00201.pdb 57 TDGVLQGKRQWD 68 usage_00260.pdb 57 TDGVLQGKRQWD 68 usage_00322.pdb 57 TDGVLQGKRQWD 68 usage_00351.pdb 52 TDGVLQGKRQWD 63 usage_00352.pdb 56 TDGVLQGKRQWD 67 usage_00353.pdb 49 TDGVLQGKRQWD 60 usage_00703.pdb 57 TDGVLQGKRQWD 68 TDGVLQGKRQWD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################