################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:51 2021 # Report_file: c_1432_68.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00409.pdb # 2: usage_00412.pdb # 3: usage_00413.pdb # 4: usage_00462.pdb # 5: usage_00463.pdb # 6: usage_00641.pdb # 7: usage_00645.pdb # 8: usage_00655.pdb # 9: usage_00770.pdb # 10: usage_01268.pdb # # Length: 63 # Identity: 57/ 63 ( 90.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/ 63 ( 92.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 63 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00409.pdb 1 PLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 60 usage_00412.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 usage_00413.pdb 1 PLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 60 usage_00462.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 usage_00463.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 usage_00641.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 usage_00645.pdb 1 PLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 60 usage_00655.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 usage_00770.pdb 1 PLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLAGLLGF 60 usage_01268.pdb 1 -----WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 55 WLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLcGLLGF usage_00409.pdb 61 VAP 63 usage_00412.pdb 56 VAP 58 usage_00413.pdb 61 VAP 63 usage_00462.pdb 56 VAP 58 usage_00463.pdb 56 VAP 58 usage_00641.pdb 56 VAP 58 usage_00645.pdb 61 VAP 63 usage_00655.pdb 56 VAP 58 usage_00770.pdb 61 VAP 63 usage_01268.pdb 56 VAP 58 VAP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################