################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:39:28 2021 # Report_file: c_0834_71.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00009.pdb # 2: usage_00223.pdb # 3: usage_00241.pdb # 4: usage_00261.pdb # 5: usage_00430.pdb # 6: usage_00431.pdb # 7: usage_00604.pdb # 8: usage_00605.pdb # 9: usage_00606.pdb # 10: usage_00607.pdb # 11: usage_00608.pdb # 12: usage_00638.pdb # 13: usage_00849.pdb # 14: usage_00850.pdb # 15: usage_00851.pdb # 16: usage_00852.pdb # # Length: 78 # Identity: 27/ 78 ( 34.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 78 ( 94.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 78 ( 1.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 PKVVEELHGAARFWLDLGLDGFRVDAVPYLIEREGTSCENLPETHEILKGFRAMVDREYP 60 usage_00223.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00241.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00261.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00430.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00431.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00604.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00605.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00606.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00607.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00608.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00638.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00849.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVPCIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00850.pdb 1 PWVFRAMAGEMLFLANLGVDILRMDAVPIIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 60 usage_00851.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVPLIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 usage_00852.pdb 1 -WVFRAMAGEMLFLANLGVDILRMDAVAKIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 59 wVframaGemlFlanLGvDilRmDAV iwkqmGTSCENLPqaHaliraFnAvmriaaP usage_00009.pdb 61 GRLLLAEAAQWPEEVVEY 78 usage_00223.pdb 61 AVFFKSEAIVHPDQVVQY 78 usage_00241.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00261.pdb 60 AVFFKSQAIVHPDQVVQY 77 usage_00430.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00431.pdb 61 AVFFKSQAIVHPDQVVQY 78 usage_00604.pdb 61 AVFFKSQAIVHPDQVVQY 78 usage_00605.pdb 61 AVFFKSQAIVHPDQVVQY 78 usage_00606.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00607.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00608.pdb 61 AVFFKSEAIVHPDQVVQY 78 usage_00638.pdb 61 AVFFKSQAIVHPDQVVQY 78 usage_00849.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00850.pdb 61 AVFFKSEAIVHPDQVVQY 78 usage_00851.pdb 60 AVFFKSEAIVHPDQVVQY 77 usage_00852.pdb 60 AVFFKSQAIVHPDQVVQY 77 avffks AivhPdqVVqY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################