################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:34:43 2021 # Report_file: c_0406_38.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00007.pdb # 2: usage_00016.pdb # 3: usage_00042.pdb # 4: usage_00045.pdb # 5: usage_00090.pdb # 6: usage_00102.pdb # 7: usage_00136.pdb # 8: usage_00137.pdb # 9: usage_00180.pdb # 10: usage_00217.pdb # 11: usage_00230.pdb # 12: usage_00289.pdb # 13: usage_00312.pdb # 14: usage_00316.pdb # 15: usage_00342.pdb # 16: usage_00343.pdb # 17: usage_00394.pdb # 18: usage_00419.pdb # 19: usage_00434.pdb # 20: usage_00448.pdb # 21: usage_00449.pdb # 22: usage_00454.pdb # 23: usage_00460.pdb # 24: usage_00461.pdb # 25: usage_00462.pdb # 26: usage_00463.pdb # 27: usage_00464.pdb # # Length: 129 # Identity: 3/129 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/129 ( 10.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/129 ( 54.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GP------SVFLFPPKPKDT--LMISRTPEVTCVVVDVSHEDPQVKFNWYVD--GV-Q-- 47 usage_00016.pdb 1 --------SVFPLA-------------TAALGCLVKDYFPE----PVTVSWN--SGAL-- 31 usage_00042.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00045.pdb 1 --------SVFPLAPSS-------G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 36 usage_00090.pdb 1 --------EVYAFATPEW--PGS-R-DKRTLACLIQNFMPE----DISVQWL------HN 38 usage_00102.pdb 1 --SKSTSG------------------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 32 usage_00136.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00137.pdb 1 --------SVFPLA-------------TAALGCLVKDYFPE----PVTVSWN--SGAL-- 31 usage_00180.pdb 1 --------SVYPLVP------------SVTLGCLVKGYFPE----PVTVKWN--YGAL-- 32 usage_00217.pdb 1 --------SVFPLAP------------TAALGCLVKDYFPE----PVTVSWN--SGAL-- 32 usage_00230.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00289.pdb 1 --------SVFPLAPS----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 34 usage_00312.pdb 1 --------SVFPLAPSS-------G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 36 usage_00316.pdb 1 ----------FPLAPS----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 32 usage_00342.pdb 1 --------SVFPLAPS-----------TAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00343.pdb 1 --------SVFPLAP-------------AALGCLVKDYFPE----PVTVSWN--SGAL-- 31 usage_00394.pdb 1 --------SVFPLAP------------TAALGCLVKDYFPE----PVTVSWN--SGAL-- 32 usage_00419.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00434.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00448.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00449.pdb 1 --------SVTLFPPSSEEL--Q-A-NKATLVCLISDFYPG----AVTVAWKADSSPV-- 42 usage_00454.pdb 1 --------SVFPLAPSSKST--S-G-GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 40 usage_00460.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00461.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00462.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00463.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 usage_00464.pdb 1 --------SVFPLAP-----------GTAALGCLVKDYFPE----PVTVSWN--SGAL-- 33 l Cl pe v w usage_00007.pdb 48 -----VHNAKTKPRE-QQYN-STYRVVSVLTVLHQNWLDG--K-EYKCKVSNK---ALPA 94 usage_00016.pdb 32 -----TS--GVHTFPAVLQSSGLYSLSSVVTVP---------Q-TYTCNVDHK---PSNT 71 usage_00042.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00045.pdb 37 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 82 usage_00090.pdb 39 EVQLPDA--RHSTTQPRKTKGSGFFVFSRLEVTRAEW--EQKD-EFICRAVHEAASPS-Q 92 usage_00102.pdb 33 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 78 usage_00136.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00137.pdb 32 -----TS--GVHTFPAVLQSSGLYSLSSVVT-V-----------TYTCNVNHK---PSNT 69 usage_00180.pdb 33 -----SS--GVRTVSSVLQS-GFYSLSSLVTVPSSTW--PS-Q-TVICNVAHP---ASKT 77 usage_00217.pdb 33 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 78 usage_00230.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00289.pdb 35 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 80 usage_00312.pdb 37 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 82 usage_00316.pdb 33 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 78 usage_00342.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00343.pdb 32 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 77 usage_00394.pdb 33 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 78 usage_00419.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00434.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00448.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00449.pdb 43 -----KA--GVETTTPSKQSNNKYAASSYLSLTPEQW--KS-HRSYSCQVTHE----GS- 87 usage_00454.pdb 41 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 86 usage_00460.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00461.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00462.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00463.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 usage_00464.pdb 34 -----TS--GVHTFPAVLQSSGLYSLSSVVTVPSSSL--GT-Q-TYICNVNHK---PSNT 79 t y S C v h usage_00007.pdb 95 PIEKTISKA 103 usage_00016.pdb 72 KVDKTV--- 77 usage_00042.pdb 87 KVDKKVEP- 94 usage_00045.pdb 83 KVDKKVEP- 90 usage_00090.pdb 93 TVQRAVSVN 101 usage_00102.pdb 79 KVDKKVEP- 86 usage_00136.pdb 87 KVDKKVEP- 94 usage_00137.pdb 70 KVDKRVEP- 77 usage_00180.pdb 78 ELIKRIEP- 85 usage_00217.pdb 79 KVDKRVEP- 86 usage_00230.pdb 87 KVDKKVEP- 94 usage_00289.pdb 81 KVDKKVEP- 88 usage_00312.pdb 83 KVDKRVEP- 90 usage_00316.pdb 79 KVDKKVEP- 86 usage_00342.pdb 80 KVDKRVEP- 87 usage_00343.pdb 78 KVDKRVEP- 85 usage_00394.pdb 79 KVDKKVEP- 86 usage_00419.pdb 87 KVDKKVEP- 94 usage_00434.pdb 87 KVDKKVEP- 94 usage_00448.pdb 80 KVDKRVEP- 87 usage_00449.pdb 88 TVEKTVA-- 94 usage_00454.pdb 87 KVDKKVEP- 94 usage_00460.pdb 80 KVDKRVEP- 87 usage_00461.pdb 80 KVDKRVEP- 87 usage_00462.pdb 80 KVDKRVEP- 87 usage_00463.pdb 80 KVDKRVEP- 87 usage_00464.pdb 80 KVDKRVEP- 87 k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################