################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:44 2021 # Report_file: c_0203_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00063.pdb # 2: usage_00064.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00071.pdb # 10: usage_00072.pdb # # Length: 145 # Identity: 40/145 ( 27.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/145 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/145 ( 20.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 SRDDIA-KAGNIGGAQTLQAVLDLESAFRERGFSQADIVKIAGNNGGAQALYSVLDVEPT 59 usage_00064.pdb 1 SQATIA-KAGNNGGAQALQTVLDLEPALRKRDFRQADIIKIAGNDGGAQALQAVIEHGPT 59 usage_00065.pdb 1 -QPDIVKIAGNTGGAQALQAVLDLELTLVEHGFSQPDIVRITGNRGGAQALQAVLALELT 59 usage_00066.pdb 1 SRADIVNVAGNNGGAQALKAVLEHEATLNERGFSRADIVKIAGNGGGAQALKAVLEHEAT 60 usage_00067.pdb 1 SPLERSKIEKQYGGATTLAFISNKQNELAQ-ILSRADILKIASYDCAAHALQAVLDCGP- 58 usage_00068.pdb 1 -QATIA-KAGNNGGAQALQTVLDLEPALRKRDFRQADIIKIAGNDGGAQALQAVIEHGPT 58 usage_00069.pdb 1 SQPDIVKIAGNSGGAQALQAVLDLELTFRERGFSQADIVKIAGNDGGTQALHAVLDLER- 59 usage_00070.pdb 1 SQATIAKMAGNNGGAQALQTVLDLEPALRKRDFRQADIIKIAGNDGGAQALQAVIEHGPT 60 usage_00071.pdb 1 SQPDIVKIAGNTGGAQALQAVLDLELTLVEHGFSQPDIVRITGNRGGAQALQAVLALELT 60 usage_00072.pdb 1 SRADIVNVAGNNGGAQALKAVLEHEATLNERGFSRADIVKIAGNGGGAQALKAVLEHEAT 60 i agn GGAq L vl e f DI I gn ggaqAL aV usage_00063.pdb 60 LGKRGFSRADIVKIAGNTGGAQALHTVLDLEPALGKRGFSRIDIVKIAANNGGAQALHAV 119 usage_00064.pdb 60 LRQHGFNLADIVK-AGNIGGAQALQAVLDLKPVLDEHGFSQPDIVK-AGNIGGAQALQAV 117 usage_00065.pdb 60 LRERGFSQPDIVKIAGNSGGAQALQAVLDLELTFRERGFSQADIVKIAGNDGGTQALHAV 119 usage_00066.pdb 61 LDERGFSRADIVRIAGNGGGAQALKAVLEHGPTLNERGFNLTDIVE-AANSGGAQALKAV 119 usage_00067.pdb 59 LGKRGFSQSDIVKIAGNIGGAQALQAVLDLES-LGKRGFSRDDIAK-AGNIGGAQTLQAV 116 usage_00068.pdb 59 LRQHGFNLADIVK-AGNIGGAQALQAVLDLKPVLDEHGFSQPDIVK-AGNIGGAQALQAV 116 usage_00069.pdb 60 LGERGFSRADIVNVAGNNGGAQALKAVLEHEATLNERGFSRADIVKIAGNGGGAQALKAV 119 usage_00070.pdb 61 LRQHGFNLADIVKMAGNIGGAQALQAVLDLKPVLDEHGFSQPDIVKMAGNIGGAQALQAV 120 usage_00071.pdb 61 LRERGFSQPDIVKIAGNSGGAQALQAVLDLELTFRERGFSQADIVKIAGNDGGTQALHAV 120 usage_00072.pdb 61 LDERGFSRADIVRIAGNGGGAQALKAVLEHGPTLNERGFNLTDIVEMAANSGGAQALKAV 120 L GF DIV AGN GGAQAL aVL GF DIv A N GG QaL AV usage_00063.pdb 120 LDLGPTLRECG-------------- 130 usage_00064.pdb 118 LSLGPALRERG-------------- 128 usage_00065.pdb 120 LD----------------------- 121 usage_00066.pdb 120 LEHGPTLRQRGLSLIDIVEIASNGG 144 usage_00067.pdb 117 LD----------------------- 118 usage_00068.pdb 117 LSLGPALRERG-------------- 127 usage_00069.pdb 120 LEHE--------------------- 123 usage_00070.pdb 121 LSLGPALRERG-------------- 131 usage_00071.pdb 121 LDL---------------------- 123 usage_00072.pdb 121 LEHGPTLRQRG-------------- 131 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################