################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:17:59 2021 # Report_file: c_1327_17.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00043.pdb # 4: usage_00103.pdb # 5: usage_00104.pdb # 6: usage_00106.pdb # 7: usage_00107.pdb # 8: usage_00110.pdb # 9: usage_00181.pdb # 10: usage_00243.pdb # 11: usage_00332.pdb # 12: usage_00370.pdb # 13: usage_00456.pdb # 14: usage_00870.pdb # 15: usage_00878.pdb # 16: usage_00989.pdb # 17: usage_00997.pdb # 18: usage_01090.pdb # 19: usage_01110.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 61 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 61 ( 78.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00029.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00043.pdb 1 ----SPEKKQEGKAVGA------T-GWLVKP---F---------NPETLLKTLQRVL--- 34 usage_00103.pdb 1 -----KENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 36 usage_00104.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00106.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00107.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00110.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00181.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00243.pdb 1 ----KEEDLI---AGGEHVLCAYI-MKPKAG---Y----GY---VATAAHFAAESS---- 38 usage_00332.pdb 1 DNEEQEKLLKKS-----------C-TL-YVGN--LSFYT-T---EEQIYELFSKS----- 36 usage_00370.pdb 1 --GKTMTLTSTLRAFPDF-----E-VVSLNF----SSAT-TPELLLKTFDHH-------- 39 usage_00456.pdb 1 CALSLAAISG------Q------A-VKTMAD-QHF---------KQVLWNW--------- 28 usage_00870.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00878.pdb 1 ---------IAQPRAGA------STAWVPSP---T---------AATLHA---------- 23 usage_00989.pdb 1 ----KKENIIAAAQAGA------S-GWVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00997.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_01090.pdb 1 -----KENIIAAAQAGA------S-GWVVKP---F---------TAATLEEKLNKIFEKL 36 usage_01110.pdb 1 ----KKENIIAAAQAGA------S-GYVVKP---F---------TAATLEEKLNKIFEKL 37 usage_00028.pdb - usage_00029.pdb 38 G 38 usage_00043.pdb - usage_00103.pdb - usage_00104.pdb - usage_00106.pdb - usage_00107.pdb - usage_00110.pdb - usage_00181.pdb - usage_00243.pdb - usage_00332.pdb - usage_00370.pdb - usage_00456.pdb - usage_00870.pdb - usage_00878.pdb - usage_00989.pdb 38 G 38 usage_00997.pdb - usage_01090.pdb 37 G 37 usage_01110.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################