################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:41 2021 # Report_file: c_1115_45.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00216.pdb # 2: usage_00230.pdb # 3: usage_00578.pdb # 4: usage_00658.pdb # 5: usage_00780.pdb # 6: usage_00781.pdb # 7: usage_00782.pdb # 8: usage_00814.pdb # 9: usage_00839.pdb # 10: usage_00849.pdb # 11: usage_00871.pdb # 12: usage_01090.pdb # 13: usage_01302.pdb # 14: usage_01308.pdb # 15: usage_01309.pdb # 16: usage_01441.pdb # 17: usage_01481.pdb # 18: usage_01482.pdb # 19: usage_01520.pdb # 20: usage_01605.pdb # 21: usage_01689.pdb # # Length: 109 # Identity: 0/109 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/109 ( 0.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/109 ( 56.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00216.pdb 1 ---------EERVKKIIGEQLGV-K-QE-EVTNNASFV-ED-----LGADSLDTVELVMA 42 usage_00230.pdb 1 ------------LVEAVAHILGI-RDLA-AVNLDSSLA-DL------GLDALMSVEVRQT 39 usage_00578.pdb 1 ------ADTLERVTKIIVDRLGV-D-EA-DVKLEASFK-ED-----LGADSLDVVELVME 45 usage_00658.pdb 1 -----RKKLIAKFVEIASEKGKD-L--E-TVDEENTFK-E------LGFDSIDVIDLV-F 43 usage_00780.pdb 1 ------STIEERVKKIIGQQLGV-K-QE-EVTNNASFV-ED-----LGADSLDTVELVMA 45 usage_00781.pdb 1 -------TIEERVKKIIGQQLGV-K-QE-EVTNNASFV-ED-----LGADSLDTVELVMA 44 usage_00782.pdb 1 ------ERVKKIIGQQLG----V-K-QE-EVTNNASFV-ED-----LGADSLDTVELVMA 41 usage_00814.pdb 1 ---------AQFLRQSLAAMLYC-E-PG-QIRDGSRFL-EL------GLDSVIAAQWIRE 41 usage_00839.pdb 1 --------MEDHLLTVLSVASGV-P-KE-EISRDSRMEDLA-------FDSLVVSELSLK 42 usage_00849.pdb 1 -----MNDVLTRVLEVVKNFEKV-D-AS-KVTPESHFV-KD-----LGLNSLDVVEVVFA 46 usage_00871.pdb 1 ------EEVLQKVAKIISNHFDI-E-AD-QVTDQLNIK-DD-----LNADSISVMEFVLE 45 usage_01090.pdb 1 -------STFDRVATIIAETCDI-P-RE-TITPESHAI-DD-----LGIDSLDFLDIAFA 44 usage_01302.pdb 1 SPQQQQQTLATLVAAATATVLGHHT-PE-SISPATAFK-D------LGIDSLTALELRNT 51 usage_01308.pdb 1 --------NFDKVKDIIVDRLGV-D-AD-KVTEDASFK-DD-----LGADSLDIAELVME 43 usage_01309.pdb 1 ------MENFDKVKDIIVDRLGV-D-AD-KVTEDASFK-DD-----LGADSLDIAELVME 45 usage_01441.pdb 1 ----TLEGIKDRVLYVLKLYDKI-D-PE-KLSVNSHFM-KD-----LGLDSLDQVEIIMA 47 usage_01481.pdb 1 -------TIEERVKKIIGEQLGV-K-QE-EVTNNASFV-ED-----LGADSLDTVELVMA 44 usage_01482.pdb 1 -------TIEERVKKIIGEQL--------------SFV-ED-----LGADSLDTVELVMA 33 usage_01520.pdb 1 ---SSLKSTFDDIKKIISKQLSV-E-ED-KIQMNSNFT-KD-----LGADSLDLVELIMA 48 usage_01605.pdb 1 -----QEEIVAGLAEIVNEIAGI-P-VE-DVKLDKSFT-DD-----LDVDSLSMVEVVVA 46 usage_01689.pdb 1 ----DINAVTNYIVGMCQKFLQ----KGEKVTPSSKLE-ELRTREDRLWDCLDTVEFVLD 51 d usage_00216.pdb 43 LEEEFDTEIPDE-EAE----------KITTVQAAIDYIN---------- 70 usage_00230.pdb 40 LERELNLVLSVR-EVR----------QL-TLRKLQELSSK--------- 67 usage_00578.pdb 46 LEDEFDMEISDE-DAE----------KIATVGDAVNYIQNQQ------- 76 usage_00658.pdb 44 FEDEFALRIEDE-EIS----------KIRKVKDLIDIVIKKLEEI---- 77 usage_00780.pdb 46 LEEEFDTEIPDE-EAE----------KITTVQAAIDYINGHQ------- 76 usage_00781.pdb 45 LEEEFDTEIPDE-EAE----------KITTVQAAIDYINGHQA------ 76 usage_00782.pdb 42 LEEEFDTEIPDE-EAE----------KITTVQAAIDYIN---------- 69 usage_00814.pdb 42 INKHYQLKIPAD-GIY----------TYPVFKAFTQWVGTQL------- 72 usage_00839.pdb 43 LRKEFGVTGVDD-ELD----------LLETVDELFQLVEKHRAA----- 75 usage_00849.pdb 47 IEQEFILDIPDH-DAE----------KIQSIPDAVEYIAQNPMAK---- 80 usage_00871.pdb 46 LEDEFGTEISDE-DAE----------KIETVGAAVDYIVSNS------- 76 usage_01090.pdb 45 IDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDELVAAKGALE 93 usage_01302.pdb 52 LTHNTGLDLPPT-LIF----------DHPTPHALTQHLHTRLTQ----- 84 usage_01308.pdb 44 LEDEFGTEIPDE-EAE----------KINTVGDAVKFIN---------- 71 usage_01309.pdb 46 LEDEFGTEIPDE-EAE----------KINTVGDAVKFINS--------- 74 usage_01441.pdb 48 MEDEFGFEIPDI-DAE----------KLMCPQEIVDYIADKK------- 78 usage_01481.pdb 45 LEEEFDTEIPDE-EAE----------KITTVQAAIDYIN---------- 72 usage_01482.pdb 34 LEEEFDTEIPDE-EAE----------KITTVQAAIDYIN---------- 61 usage_01520.pdb 49 LEEKFNVTISDQ-DAL----------KINTVQDAIDYIEKN-------- 78 usage_01605.pdb 47 AEERFDVKIPDD-DVK----------NLKTVGDATKYILDHQ------- 77 usage_01689.pdb 52 VEEIFDVTVPDE-VAD----------NFQTLQEIADFVVSERAK----- 84 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################