################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:03 2021 # Report_file: c_0494_7.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00018.pdb # 5: usage_00039.pdb # 6: usage_00040.pdb # 7: usage_00058.pdb # 8: usage_00059.pdb # 9: usage_00095.pdb # 10: usage_00096.pdb # 11: usage_00097.pdb # 12: usage_00098.pdb # 13: usage_00099.pdb # # Length: 106 # Identity: 26/106 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/106 ( 35.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/106 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -IFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFS 59 usage_00016.pdb 1 -IFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFS 59 usage_00017.pdb 1 -IFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFS 59 usage_00018.pdb 1 -IFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFS 59 usage_00039.pdb 1 CIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGV 60 usage_00040.pdb 1 -LFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFA 59 usage_00058.pdb 1 CVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAA 60 usage_00059.pdb 1 CVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAA 60 usage_00095.pdb 1 CIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFH 60 usage_00096.pdb 1 -IFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFH 59 usage_00097.pdb 1 CIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFH 60 usage_00098.pdb 1 -IFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFH 59 usage_00099.pdb 1 -IFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFH 59 FC I G yEde L lDI t GHtLVIPK H e usage_00015.pdb 60 VVPKIANAIKAE--FNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYG 103 usage_00016.pdb 60 VVPKIANAIKAE--FNPVGFNLLNNNGEKAGQTVFHFHLHLIP--- 100 usage_00017.pdb 60 VVPKIANAIKAE--FNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYG 103 usage_00018.pdb 60 VVPKIANAIKAE--FNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYG 103 usage_00039.pdb 61 LLAKASRAVAGP--DGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTD 104 usage_00040.pdb 60 RIPKIARALQKA--TKADGLNIINNNEETAGQTVFHAHVHLVPRFA 103 usage_00058.pdb 61 VGQRIARAARESGLH-ADGNNIAINDGKAAFQTVFHIHLHVVPRRN 105 usage_00059.pdb 61 VGQRIARAARESGLH-ADGNNIAINDGKAAFQTVFHIHLHVVPRRN 105 usage_00095.pdb 61 AVPKIARAIRDE--FEPIGLNTLNNNGEKAGQSVFHYHMHIIP--- 101 usage_00096.pdb 60 AVPKIARAIRDE--FEPIGLNTLNNNGEKAGQSVFHYHMHIIP--- 100 usage_00097.pdb 61 AVPKIARAIRDE--FEPIGLNTLNNNGEKAGQSVFHYHMHIIP--- 101 usage_00098.pdb 60 AVPKIARAIRDE--FEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYG 103 usage_00099.pdb 60 AVPKIARAIRDE--FEPIGLNTLNNNGEKAGQSVFHYHMHIIP--- 100 ia A g N N g A Q VfH H H P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################