################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:30 2021 # Report_file: c_0182_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00028.pdb # # Length: 197 # Identity: 48/197 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/197 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/197 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -----ELYIVADHTLFLTRHRNLQHTKQRLLEVANYVDQLLRTLDIQVALTGLEVWTERD 55 usage_00014.pdb 1 -----KLFLVADYIMYLKYGRNLTAVRTRMYDIVNVITPIYHRMNIHVALVGLEIWSNTD 55 usage_00015.pdb 1 --KYVKLFLVADYIMYLKYGRNLTAVRTRMYDIVNVITPIYHRMNIHVALVGLEIWSNTD 58 usage_00016.pdb 1 --KYVKLFLVADYIMYLKYGRNLTAVRTRMYDIVNVITPIYHRMNIHVALVGLEIWSNTD 58 usage_00017.pdb 1 --KYVKLFLVADYIMYLKYGRNLTAVRTRMYDIVNVITPIYHRMNIHVALVGLEIWSNTD 58 usage_00028.pdb 1 AKKYIEFYVVVDNIMYRHYKRDQPVIKRKVYEMINTMNMIYRRLNFHIALIGLEIWSNIN 60 l VaD imyl y Rnl r y N iy r nihvAL GLEiWsn d usage_00013.pdb 56 RSRVTQDANATLWAFLQWR-RGLWAQRPHDSAQLLTGRAFQGATVGLAPVEGMCRAESSG 114 usage_00014.pdb 56 KIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFNGPTAGLGYLGGICNTMYSA 115 usage_00015.pdb 59 KIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFNGPTAGLGYLGGICNTMYSA 118 usage_00016.pdb 59 KIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFNGPTAGLGYLGGICNTMYSA 118 usage_00017.pdb 59 KIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFNGPTAGLGYLGGICNTMYSA 118 usage_00028.pdb 61 EINVQSDVRATLNLFGEWREKKLLPRKRNDNAQLLTGIDFNGTPVGLAYIGSICNPKTSA 120 i Vqs a TL lF WR Ll rk hDnAQLLTGi FnG t GL y ggiCn Sa usage_00013.pdb 115 GVSTDHSELPIGAAATMAHEIGHSLGLSHDPDG-CCVEAAAESGGCVMAAATGHPFP-RV 172 usage_00014.pdb 116 GIVQDHSKIHHLVAIAMAHEMGHNLGMDHDKDT-CT-C--G-TRPCVMAGALSCEAS-FL 169 usage_00015.pdb 119 GIVQDHSKIHHLVAIAMAHEMGHNLGMDHDKDT-CT-C--G-TRPCVMAGALSCEAS-FL 172 usage_00016.pdb 119 GIVQDHSKIHHLVAIAMAHEMGHNLGMDHDKDT-CT-C--G-TRPCVMAGALSCEAS-FL 172 usage_00017.pdb 119 GIVQDHSKIHHLVAIAMAHEMGHNLGMDHDKDT-CT-C--G-TRPCVMAGALSCEAS-FL 172 usage_00028.pdb 121 AVVQDYSSRTRMVAITMAHEMGHNLGMNHD-RGFCT-C--G----------------FYQ 160 g vqDhS vAi MAHEmGHnLGm HD d Ct c g usage_00013.pdb 173 FSACSRRQLRAFFRKG- 188 usage_00014.pdb 170 FSDCSQKDHREFLIK-- 184 usage_00015.pdb 173 FSDCSQKDHREFLI--- 186 usage_00016.pdb 173 FSDCSQKDHREFLIKNM 189 usage_00017.pdb 173 FSDCSQKDHREFLIK-- 187 usage_00028.pdb 161 FSSCSVREHQRYLLRDR 177 FS CS hr fl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################