################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:44 2021 # Report_file: c_0270_26.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00276.pdb # 2: usage_00277.pdb # 3: usage_00278.pdb # 4: usage_00385.pdb # 5: usage_00387.pdb # 6: usage_00388.pdb # # Length: 257 # Identity: 9/257 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/257 ( 8.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 137/257 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00276.pdb 1 ----S-DTFKAWISKIADISPDVRVEWTESIPQIIATREDI-----SKELNQALAKTFID 50 usage_00277.pdb 1 ----S-DTFKAWISKIADISPDVRVEWTESIPQIIATREDI-----SKELNQALAKTFID 50 usage_00278.pdb 1 ------------------------------IPQIIATREDI-----SKELNQALAKTFID 25 usage_00385.pdb 1 APELVGSVTGLLYQLLCSDNELFRESATKCVSKMLGTHSLINFAVAHSDTYKIWLSKMAD 60 usage_00387.pdb 1 --------IGFIYHELSSENELFRKEATKLIGQILTSYSDLNFVSTHSDTFKAWISKIAD 52 usage_00388.pdb 1 --------------------------------------EDI-----SKELNQALAKTFID 17 di a D usage_00276.pdb 51 SDPRVRRTSVMIFNKVPVTEIWKNIT-NKAIYTSLLHLAREKHKEVRELCINTMAKFYSN 109 usage_00277.pdb 51 SDPRVRRTSVMIFNKVPVTEIWKNIT-NKAIYTSLLHLAREKHKEVRELCINTMAKFYSN 109 usage_00278.pdb 26 SDPRVRRTSVMIFNKVPVTEIWKNIT-NKAIYTSLLHLAREKHKEVRELCINTMAKFYSN 84 usage_00385.pdb 61 ISPHVRQAWVSEIPS----ILMSRSDLSDDISKGLAKALIDSDHTVRLSAIQTFH----E 112 usage_00387.pdb 53 ISPDVRVEWTESIPQ----IIATREDISKELNQALAKTFIDSDPRVRRTSVMIFN----K 104 usage_00388.pdb 18 SDPRVRRTSVMIFNKVPVTEIWKNIT-NKAIYTSLLHLAREKHKEVRELCINTMAKFYSN 76 P VR v i k i L VR i t usage_00276.pdb 110 SLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLP-------FEP 162 usage_00277.pdb 110 SLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLP-------FEP 162 usage_00278.pdb 85 SLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLP-------FEP 137 usage_00385.pdb 113 VP-----VKRLWECLP-NAAVFAGLVHLTRETRRDLRDECIDAVARIY--TESIESIPK- 163 usage_00387.pdb 105 VP-----VTEIWKNIT-NKAIYTSLLHLAREKHKEVRELCINTMAKFY--SNSLNEIER- 155 usage_00388.pdb 77 SLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLP-------FEP 129 e i L L e usage_00276.pdb 163 DNDKRVHRLLTVLS---------------------------------------------- 176 usage_00277.pdb 163 DNDKRVHRLLTVLS---------------------------------------------- 176 usage_00278.pdb 138 DNDKRVHRLLTVLSHFDKKAFTSFFAFNARQIKISFAISKYIDFSKFLNNQESMSSSQGP 197 usage_00385.pdb 164 -----TNENKEIWG-------------------VVE------------------------ 175 usage_00387.pdb 156 -----TYQNKEIW----------------------------------------------- 163 usage_00388.pdb 130 DNDKRVHRLLTVLSHFDKKAFTSFFAFNARQIKISFAISKYIDFSK-------------- 175 usage_00276.pdb ----------------- usage_00277.pdb ----------------- usage_00278.pdb 198 -IVMNKYNQTLQWLA-- 211 usage_00385.pdb ----------------- usage_00387.pdb ----------------- usage_00388.pdb 176 FIVMNKYNQTLQWLASG 192 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################