################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:31:52 2021 # Report_file: c_0121_13.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00048.pdb # 2: usage_00109.pdb # 3: usage_00124.pdb # 4: usage_00125.pdb # 5: usage_00126.pdb # 6: usage_00141.pdb # 7: usage_00142.pdb # 8: usage_00187.pdb # 9: usage_00188.pdb # 10: usage_00189.pdb # 11: usage_00212.pdb # 12: usage_00231.pdb # 13: usage_00264.pdb # 14: usage_00269.pdb # 15: usage_00271.pdb # 16: usage_00300.pdb # 17: usage_00307.pdb # 18: usage_00371.pdb # 19: usage_00372.pdb # 20: usage_00373.pdb # 21: usage_00377.pdb # 22: usage_00385.pdb # 23: usage_00408.pdb # 24: usage_00409.pdb # 25: usage_00416.pdb # 26: usage_00417.pdb # 27: usage_00424.pdb # 28: usage_00425.pdb # 29: usage_00454.pdb # 30: usage_00483.pdb # 31: usage_00498.pdb # 32: usage_00518.pdb # 33: usage_00539.pdb # # Length: 144 # Identity: 34/144 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/144 ( 31.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/144 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTASY 60 usage_00109.pdb 1 QVQLVQSGAEVKKPGSSVKVSCEASGG-T--YVITWVRQAPGQGLEWMGGFIPTFRTAMY 57 usage_00124.pdb 1 -VQLVQSGAEVNKPGSSVKVSCQASGATLNSHAFSWVRQAPGQGLEWMAGIIPIFGSSHY 59 usage_00125.pdb 1 --QLLQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPVFGSANY 58 usage_00126.pdb 1 -VQLLQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPVFGSANY 59 usage_00141.pdb 1 -VQLQQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGITPILGIANY 59 usage_00142.pdb 1 -VQLQQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGITPILGIANY 59 usage_00187.pdb 1 --TLKQSGAEVKKPGSSVKVSCTASGGTLRTYGVSWVRQAPGQGLEWLGRTIPLFGKTDY 58 usage_00188.pdb 1 --TLKQSGAEVKKPGSSVKVSCTASGGTLRTYGVSWVRQAPGQGLEWLGRTIPLFGKTDY 58 usage_00189.pdb 1 --TLKQSGAEVKKPGSSVKVSCTASGGTLRTYGVSWVRQAPGQGLEWLGRTIPLFGKTDY 58 usage_00212.pdb 1 -VQLQESGAEVKKPGSSVRVSCKASGGTFDSYSIHWVRQAPGQGLEWMGGIIPAFGTLSS 59 usage_00231.pdb 1 --QLVQSGAEVKKPGSSVKVSCKA-----SNYAINWVRQAPGQGLEWMGNIEPYFGTANY 53 usage_00264.pdb 1 --QLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAY 58 usage_00269.pdb 1 EVQLVESGAEVKKPGSSVKVSCRASG-TFYKYAINWVRQAPGQGLEWMGGIIPFFGTTNY 59 usage_00271.pdb 1 -VQLVQSGAEVKKPGSSVKVSCEASGVTSSSYTISWVRLAPGQGLEWMGRITPIFDITNY 59 usage_00300.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGWIKPRWGAAHY 59 usage_00307.pdb 1 QVQLVQSGAEVKKPASSVKVSCQASGGSFSTRTISWLRQAPGQGLEWMGGISPIFGAANY 60 usage_00371.pdb 1 -VQLVQPGVELRNPGASVKVSCKASGYIFTMNSIDWVRQAPGQGLEWMGRIDPEDGGTKY 59 usage_00372.pdb 1 -VQLVQPGVELRNPGASVKVSCKASGYIFTMNSIDWVRQAPGQGLEWMGRIDPEDGGTKY 59 usage_00373.pdb 1 -VQLVQPGVELRNPGASVKVSCKASGYIFTMNSIDWVRQAPGQGLEWMGRIDPEDGGTKY 59 usage_00377.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGYTFTSYRMHWVRQAPGQGLEWIGYINPSTGYTEY 59 usage_00385.pdb 1 EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQA-GQGLEWMGGIIPIFGTANY 59 usage_00408.pdb 1 --QLVQSGAEVKKAGSSVRVSCKASGATFSSYSISWVRQAPGQGPQWMGGIVPSSGAAKY 58 usage_00409.pdb 1 --ELVQSGAEVKKPGSSVKVSCKASGGTFSSYGISWVRQAPGQGLEWMGGIIPIFGTANY 58 usage_00416.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANY 59 usage_00417.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANY 59 usage_00424.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGYAFSYSWINWVRQAPGQGLEWMGRIFPGDGDTDY 59 usage_00425.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGYAFSYSWINWVRQAPGQGLEWMGRIFPGDGDTDY 59 usage_00454.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAY 59 usage_00483.pdb 1 -VQLVESGAEVKKPGSSVKVSCKASGGTFITHVFTWVRQAPGQGLEWVGGFIAIFGTSNY 59 usage_00498.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGSIIPWFGTTNY 59 usage_00518.pdb 1 EVQLVESGAEVKKPGSSVKVSCRASG-TFYKYAINWVRQAPGQGLEWMGGIIPFFGTTNY 59 usage_00539.pdb 1 -VELVQSGAEVKKPGSSVKVSCKASGGTFSSYGISWVRQAPGQGLEWMGGIIPIFGTANY 59 L G E pg SV VSC WvRqA GQGl W g p y usage_00048.pdb 61 AQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVGY-C--SST-----------S 106 usage_00109.pdb 58 AQGFQGRVTITADESTSIAYMELTNLRSEDTAVYYCARGPL-S----------------- 99 usage_00124.pdb 60 AQKFRGRVTISADESTRTVYLHLRGLRSDDTAVYYCASNSI-AGG--------------- 103 usage_00125.pdb 59 AQKFQGRVTITADEATSTTYMELSSLRSEDTAVYFCAKGG-------------------- 98 usage_00126.pdb 60 AQKFQGRVTITADEATSTTYMELSSLRSEDTAVYFCAKGG-------------------- 99 usage_00141.pdb 60 AQKFQGRVTITTDESTSTAYMELSSLRSEDTAVYYCARDTV-M----------------- 101 usage_00142.pdb 60 AQKFQGRVTITTDESTSTAYMELSSLRSEDTAVYYCARDTV-M----------------- 101 usage_00187.pdb 59 AQKFQGRVTITADKSMDTSFMELTSLTSEDTAVYYCARDLT-T--L-T------------ 102 usage_00188.pdb 59 AQKFQGRVTITADKSMDTSFMELTSLTSEDTAVYYCARDLT-T--L-T------------ 102 usage_00189.pdb 59 AQKFQGRVTITADKSMDTSFMELTSLTSEDTAVYYCARDLT-T--L-T------------ 102 usage_00212.pdb 60 AQDFQARVTISADKSTSTAYMELSGLRSEDTAVYYCARGSF-D--YYFWSASHP------ 110 usage_00231.pdb 54 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFM-S----------------- 95 usage_00264.pdb 59 AQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGN-Y--Y-------------- 101 usage_00269.pdb 60 AQKFQGRLTITADGSTNTAYMQLDSLRSEDTAVYYCAGPSI-T--ESHYCLDC----AAK 112 usage_00271.pdb 60 AQKFQGRVTLTADKSTGTTYMELSSLRSDDTAVYYCARDKS-D--V--VV----VTSIRP 110 usage_00300.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGS-------------------- 99 usage_00307.pdb 61 AQRFQGRVTITADKSTSTAYMELTSLTSEDTAVYYCARDRP-P----------------- 102 usage_00371.pdb 60 AQKFQGRVTFTADTSTSTAYVELNSLRSEDTAVYYCARVDD-Y----------------- 101 usage_00372.pdb 60 AQKFQGRVTFTADTSTSTAYVELNSLRSEDTAVYYCARVDD-Y----------------- 101 usage_00373.pdb 60 AQKFQGRVTFTADTSTSTAYVELNSLRSEDTAVYYCARVDD-Y----------------- 101 usage_00377.pdb 60 NQKFKDKATITADESTNTAYMELSSLRSEDTAVYYCARGG-------------------- 99 usage_00385.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARTFHIR----------------- 102 usage_00408.pdb 59 AQQFQGRLTITADTSTNTAYLELSSLRYDDTAVYYCTRDRS-R--V-RYF---------D 105 usage_00409.pdb 59 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDG-I----------------- 100 usage_00416.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDG-I----------------- 101 usage_00417.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDG-I----------------- 101 usage_00424.pdb 60 NGKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARNVF-D----------------- 101 usage_00425.pdb 60 NGKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARNVF-D----------------- 101 usage_00454.pdb 60 AQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGN-Y--Y-------------- 102 usage_00483.pdb 60 AQKFQGRVTITADESTSTAYMELTSLTSEDTAVYYCARGIS-G----------------- 101 usage_00498.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDSE------------------- 100 usage_00518.pdb 60 AQKFQGRLTITADGSTNTAYMQLDSLRSEDTAVYYCAGPSI-T--ESHYCLDC----AAK 112 usage_00539.pdb 60 AQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDG-I----------------- 101 F r T D t L L s DTAVY Ca usage_00048.pdb 107 CN-----RGAF-DIWGQGTMVTVS 124 usage_00109.pdb 100 -R------GYY-DYWGQGTLVTVS 115 usage_00124.pdb 104 -Y-----YYDM-DVWGQGTTVTVS 120 usage_00125.pdb 99 --------HGM-DVWGQGTTVTVA 113 usage_00126.pdb 100 --------HGM-DVWGQGTTVTVA 114 usage_00141.pdb 102 --------GGM-DVWGQGTTVTVS 116 usage_00142.pdb 102 --------GGM-DVWGQGTTVTVS 116 usage_00187.pdb 103 -S-----YNWW-DLWGQGTLVTVS 119 usage_00188.pdb 103 -S-----YNWW-DLWGQGTLVTVS 119 usage_00189.pdb 103 -S-----YNWW-DLWGQGTLVTVS 119 usage_00212.pdb 111 P------NDAL-AIWGQGTLVTVS 127 usage_00231.pdb 96 -Y------KHLSDYWGQGTLVTVS 112 usage_00264.pdb 102 -Y-----YSGM-DVWGQGTTVTVS 118 usage_00269.pdb 113 DY-----YYGL-DVWGQGTTVTVS 130 usage_00271.pdb 111 AY-----YYGM-DVWGQGTTVTVS 128 usage_00300.pdb 100 --------FWF-GYWGQGTLVTVS 114 usage_00307.pdb 103 -G------AQF-DTWGQGTLVTVS 118 usage_00371.pdb 102 -Y------LGY-DYWGQGTQVTV- 116 usage_00372.pdb 102 -Y------LGY-DYWGQGTQVTV- 116 usage_00373.pdb 102 -Y------LGY-DYWGQGTQVTV- 116 usage_00377.pdb 100 --------GVF-DYWGQGTLVTVS 114 usage_00385.pdb 103 -RYRSGYYDKM-DHWGQGTLVTVS 124 usage_00408.pdb 106 RE-----SGWF-DPWGQGTLVTVS 123 usage_00409.pdb 101 -Y------GEL-DFWGQGTLVTVS 116 usage_00416.pdb 102 -Y------GEL-DFWGQGTLVTVS 117 usage_00417.pdb 102 -Y------GEL-DFWGQGTLVTVS 117 usage_00424.pdb 102 -G------YWL-VYWGQGTLVTVS 117 usage_00425.pdb 102 -G------YWL-VYWGQGTLVTVS 117 usage_00454.pdb 103 -Y-----YSGM-DVWGQGTTVTVS 119 usage_00483.pdb 102 -S-----YGWF-DPWGQGTLVTV- 117 usage_00498.pdb 101 --------YYF-DHWGQGTLVTVS 115 usage_00518.pdb 113 DY-----YYGL-DVWGQGTTVTVS 130 usage_00539.pdb 102 -Y------GEL-DFWGQGTLVTVS 117 WGQGT VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################