################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:17 2021 # Report_file: c_0928_14.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00057.pdb # 2: usage_00540.pdb # 3: usage_00541.pdb # 4: usage_00543.pdb # 5: usage_00544.pdb # 6: usage_00545.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 45 ( 73.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 45 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 VDVLVVAHHPVV-PGSVIKCRAIGVLMMED-ESGLDEKIIAVP-- 41 usage_00540.pdb 1 VLCFEPDPT---KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNG 42 usage_00541.pdb 1 VLCFEPDPT---KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFN- 41 usage_00543.pdb 1 VLCFEPDPT---KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFN- 41 usage_00544.pdb 1 VLCFEPDPT---KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFN- 41 usage_00545.pdb 1 VLCFEPDPT---KARVLYDAKIVDVIVG------KIPEYLIHFN- 35 Vlcfepdpt arvlydakivdVivg kipeylihf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################