################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:31 2021 # Report_file: c_1288_124.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00578.pdb # 2: usage_00648.pdb # 3: usage_00649.pdb # 4: usage_00650.pdb # 5: usage_00716.pdb # 6: usage_00787.pdb # 7: usage_00821.pdb # 8: usage_00841.pdb # 9: usage_00868.pdb # 10: usage_01040.pdb # 11: usage_01252.pdb # 12: usage_01253.pdb # # Length: 65 # Identity: 1/ 65 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 65 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 65 ( 73.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00578.pdb 1 -NITILATGG-TIAGGGDSATKSNYTVG--------KVGVENLVNAV------PQLKDI- 43 usage_00648.pdb 1 -NIVILATGG-T-IAGSA-AA----------------LGVETLIQAV------PELKT-- 32 usage_00649.pdb 1 -NIVILATGG-T-IA----------------------LGVETLIQAV------PELKT-- 27 usage_00650.pdb 1 -NIVILATGG-T-IAGS-----------G-------ALGVETLIQAV------PELKT-- 31 usage_00716.pdb 1 PSVLLIGPSG---------------------------AGKTALLTLFERG----PL---- 25 usage_00787.pdb 1 -NVVILATGG-T-IAGAG-ASAAN-----SATYQAAKVGVDKLIAGV------PELAD-- 43 usage_00821.pdb 1 -NIVILATGG-T-IAGSA-AANTQ-----TTGYKAGALGVETLIQAV------PELKT-- 43 usage_00841.pdb 1 D-YVDGIS-GGT-I------------------------TSKGVDELFNSLSGYVKFLT-S 32 usage_00868.pdb 1 -NVMILGPSG---------------------------SGKEVMSRYIHNA----S----- 23 usage_01040.pdb 1 -NVVILATGG-T-IAGAG-ASAAN-----SATYQAAKVGVDKLIAGV------PELAD-- 43 usage_01252.pdb 1 -NIVILATGG-T-IA-----------------------GVETLIQAV------PELKT-- 26 usage_01253.pdb 1 -NIVILATGG-T-IA-----------------------GVETLIQAV------PELKT-- 26 G g usage_00578.pdb ----- usage_00648.pdb ----- usage_00649.pdb ----- usage_00650.pdb ----- usage_00716.pdb 26 L---- 26 usage_00787.pdb ----- usage_00821.pdb 44 L---- 44 usage_00841.pdb ----- usage_00868.pdb 24 PRKEG 28 usage_01040.pdb ----- usage_01252.pdb ----- usage_01253.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################