################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:52 2021 # Report_file: c_0722_28.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00052.pdb # 2: usage_00092.pdb # 3: usage_00106.pdb # 4: usage_00107.pdb # 5: usage_00302.pdb # 6: usage_00303.pdb # 7: usage_00334.pdb # 8: usage_00341.pdb # 9: usage_00381.pdb # 10: usage_00474.pdb # 11: usage_00593.pdb # # Length: 71 # Identity: 6/ 71 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 71 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 71 ( 19.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 EKTVEVLDTDYKSYAVIFATRVKDG--RTLHMMRLYSRSREVSPTAMAIFRKLARERNYT 58 usage_00092.pdb 1 -YSVSVVETDYDQYALLYSQGSK-GPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFT 58 usage_00106.pdb 1 ------VEANYDEYALLFSRGTKGPG-QDFRMATLYSRTQTLKDELKEKFTTFSKAQGLT 53 usage_00107.pdb 1 ------VEANYDEYALLFSRGTKGPG-QDFRMATLYSRTQTLKDELKEKFTTFSKAQGLT 53 usage_00302.pdb 1 -YSVSVVETDYDQYALLYSQGSK-GPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFT 58 usage_00303.pdb 1 -YSVSVVETDYDQYALLYSQGSK-GPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFT 58 usage_00334.pdb 1 -LDVRIVDTDYSSFAVLYIYKELEG--ALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLP 57 usage_00341.pdb 1 ------VEANYDEYALLFSRGTKGPG-QDFRMATLYSRTQTLKDELKEKFTTFSKAQGLT 53 usage_00381.pdb 1 FNTFTILKTDYDNYIMFHLINEKDG--KTFQLMELYGRKADLNSDIKEKFVKLCEEHGII 58 usage_00474.pdb 1 -YSVSVVETDYDQYALLYSQGSK-GPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFT 58 usage_00593.pdb 1 ------VETDYDQYALLYSQGSKG-PGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFT 53 Y ya k m LYsR F g usage_00052.pdb 59 DEMVAVLP--- 66 usage_00092.pdb 59 EDTIVFLPQ-- 67 usage_00106.pdb 54 EEDIVFLPQ-- 62 usage_00107.pdb 54 EEDIVFLPQ-- 62 usage_00302.pdb 59 EDTIVFLPQ-- 67 usage_00303.pdb 59 EDTIVFLPQ-- 67 usage_00334.pdb 58 KDMMVMLPQ-- 66 usage_00341.pdb 54 EEDIVFL---- 60 usage_00381.pdb 59 KENIIDLT--- 66 usage_00474.pdb 59 EDTIVFLPQTD 69 usage_00593.pdb 54 EDTIVFLPQ-- 62 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################