################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:55 2021 # Report_file: c_0740_107.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00005.pdb # 2: usage_00202.pdb # 3: usage_00269.pdb # 4: usage_00274.pdb # 5: usage_00455.pdb # 6: usage_00744.pdb # 7: usage_00830.pdb # # Length: 74 # Identity: 8/ 74 ( 10.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 74 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 74 ( 35.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ----KRCVH--NMEYAVKVIDKSKRD---------PSEEIEILLRYGQHPNIITLKDVYD 45 usage_00202.pdb 1 GNVYLAREKQSKFILALKVLFKAQLEKA--GVEHQLRREVEIQSHL-RHPNILRLYGYFH 57 usage_00269.pdb 1 GDVHLVEERSSGLERVIKTINKDRS----QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFE 55 usage_00274.pdb 1 GEVLKCKDRITQQEYAVKVINKASA---KNKDTSTILREVELLKKL-DHPNIMKLFEILE 56 usage_00455.pdb 1 GEVILCKDKITGQECAVKVISKRQVK--QKTDKESLLREVQLLKQL-DHPNIMKLYEFFE 57 usage_00744.pdb 1 SEVILAEDKRTQKLVAIKCIAK------------SMENEIAVLHKI-KHPNIVALDDIYE 47 usage_00830.pdb 1 GEVILCKDKITGQECAVKVISKRQVK--QKTDKESLLREVQLLKQL-DHPNIMKLYEFFE 57 a K i K E l HPNI l usage_00005.pdb 46 DGKHVYLVTE---- 55 usage_00202.pdb 58 DATRVYLI------ 65 usage_00269.pdb 56 DYHNMYIVME---- 65 usage_00274.pdb 57 DSSSFYIVG----- 65 usage_00455.pdb 58 DKGYFYLVGE---- 67 usage_00744.pdb 48 SGGHLYLIMQLVSG 61 usage_00830.pdb 58 DKGYYYLVG----- 66 d Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################