################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:45 2021 # Report_file: c_0821_67.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00060.pdb # 2: usage_00554.pdb # 3: usage_00653.pdb # 4: usage_00941.pdb # 5: usage_01186.pdb # 6: usage_01371.pdb # # Length: 69 # Identity: 0/ 69 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 69 ( 14.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 69 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 PEEYMGDVIGDLNARRGQILGMEPRG-----NAQVIRAFVPLAEMF-G--YATDLRSKTQ 52 usage_00554.pdb 1 -----GDVIGDLNARRGQILGMEPRG-----NAQVIRAFVPLAEMF-G--YATDLRSKTQ 47 usage_00653.pdb 1 ----MGDVIGDLNARRGQILGMEPRG-----NAQVIRAFVPLAEMF-G--YATDLRSKTQ 48 usage_00941.pdb 1 ----LGNVITLCVEKRGVQTNMVYHG-----NQVALTYEIPMAEVVLD--FFDRLKSTSR 49 usage_01186.pdb 1 ----MGDVMGDLNRRRGLIQGMEDTV-----SGKVIRAEVPLGEMF-G--YATDVRSMSQ 48 usage_01371.pdb 1 -------MAKAIDQ---AGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQP--- 47 v m ra p e a s usage_00060.pdb 53 GRGSFVMFF 61 usage_00554.pdb 48 GRGSFVMFF 56 usage_00653.pdb 49 GRGSFVMFF 57 usage_00941.pdb 50 GYASLDYNF 58 usage_01186.pdb 49 GRASYSM-- 55 usage_01371.pdb 48 NLMI-FQ-- 53 g s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################