################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:59 2021 # Report_file: c_0611_58.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00047.pdb # 2: usage_00049.pdb # 3: usage_00107.pdb # 4: usage_00108.pdb # 5: usage_00109.pdb # 6: usage_00582.pdb # # Length: 70 # Identity: 10/ 70 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 70 ( 24.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 70 ( 10.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKS-I- 58 usage_00049.pdb 1 SEAHLRRIVEAARPF-TGPVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLS 58 usage_00107.pdb 1 -SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYN 58 usage_00108.pdb 1 -SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYN 58 usage_00109.pdb 1 -SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYN 58 usage_00582.pdb 1 DLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSILNANVAELLVVEKDTRFIPGLQL-SD 59 l kIv E GpG G lT lL l E D L usage_00047.pdb 59 G-DERLEVIN 67 usage_00049.pdb 59 G-LP-VRLVF 66 usage_00107.pdb 59 Q-QKNITIYQ 67 usage_00108.pdb 59 Q-QKNITIYQ 67 usage_00109.pdb 59 Q-QKNITIYQ 67 usage_00582.pdb 60 AAPGKLRIVH 69 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################