################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:34:36 2021 # Report_file: c_0100_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00030.pdb # 6: usage_00034.pdb # 7: usage_00040.pdb # # Length: 209 # Identity: 33/209 ( 15.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/209 ( 76.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/209 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 RAVFFDLDNTLIDTAGASRRG-LEVIKLLQSKYHY--KEEAEIICDKVQVKLSKECF-HP 56 usage_00024.pdb 1 RAVFFDLDNTLIDTAGASRRG-LEVIKLLQSKYHY--KEEAEIICDKVQVKLSKE----- 52 usage_00025.pdb 1 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY--KEEAEIICDKVQVKLSKECF-HP 57 usage_00026.pdb 1 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY--KEEAEIICDKVQVKLSKECF-HP 57 usage_00030.pdb 1 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY--KEEAEIICDKVQVKLSKECFH-- 56 usage_00034.pdb 1 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY--KEEAEIICDKVQVKLSKECF-HP 57 usage_00040.pdb 1 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHG-LPV--DFETAYSELIELIKEYG---- 53 ravFFDLDnTLiDTagasrrg levIkllqsky y eaEiicdkvqvklske usage_00023.pdb 57 YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQH-TLAEDVKA-LTELRK 114 usage_00024.pdb 53 ---CITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQH-TLAEDVKA-LTELRK 107 usage_00025.pdb 58 YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRK 117 usage_00026.pdb 58 YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRK 117 usage_00030.pdb 57 ---CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK 113 usage_00034.pdb 58 YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRK 117 usage_00040.pdb 54 --SNF----PYHF-DYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKE 106 ci tsHw eaiqetkgga NrKlaeecyflwksTrlqh la dvka LteLrk usage_00023.pdb 115 -EVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPG 173 usage_00024.pdb 108 -EVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPG 166 usage_00025.pdb 118 -EVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPG 176 usage_00026.pdb 118 -EVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPG 176 usage_00030.pdb 114 -EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG 172 usage_00034.pdb 118 -EVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPG 176 usage_00040.pdb 107 LGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPE 166 evrLlllTnGdrqtQrEKIeacacqsyFdavv ggeq eeKPaPsIFy cc llgVqPg usage_00023.pdb 174 DCVVGDTLETDIQGGLNAGLKA-TVWINK 201 usage_00024.pdb 167 DCVVGDTLETDIQGGLNAGLKA-TVWI-- 192 usage_00025.pdb 177 DCVMVGDTLETDIQGGLNAGLKATVWINK 205 usage_00026.pdb 177 DCVMVGDTLETDIQGGLNAGLKATVWI-- 203 usage_00030.pdb 173 DCVMVGDTLETDIQGGLNAGLKATVWIN- 200 usage_00034.pdb 177 DCVMVGDTLETDIQGGLNAGLKATVWIN- 204 usage_00040.pdb 167 EALMVGDRLYSDIYGAKRVGMKTVWFR-- 193 dcv G tvwi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################