################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:16 2021 # Report_file: c_0328_72.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00189.pdb # 2: usage_00404.pdb # 3: usage_00406.pdb # 4: usage_00420.pdb # 5: usage_00635.pdb # # Length: 166 # Identity: 145/166 ( 87.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/166 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/166 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00189.pdb 1 -AFNLQKAAAEGLMSLLREMGKGYLSLCSYNCKESINILSHLPSHHYNTGWVLCQIGRAY 59 usage_00404.pdb 1 ---------AEGLMSLLREMGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAY 51 usage_00406.pdb 1 E-----------GLSLLR-EGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAY 48 usage_00420.pdb 1 ----------EGLMSLLREMGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAY 50 usage_00635.pdb 1 -AFNLQKAAAEGLMSLLREMGKGYLSLCSYNCKESINILSHLPSHHYNTGWVLCQIGRAY 59 lmSLLR mGKGYL LCSYNCKE INILSHLPSHHYNTGWVLCQIGRAY usage_00189.pdb 60 FELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEA 119 usage_00404.pdb 52 FELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEA 111 usage_00406.pdb 49 FELSEY-QAERIFSEVRRIENYRVEG-EIYSTTLWHLQKDVALSVLSKDLTD-DKNSPEA 105 usage_00420.pdb 51 FELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEA 110 usage_00635.pdb 60 FELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEA 119 FELSEY QAERIFSEVRRIENYRVEG EIYSTTLWHLQKDVALSVLSKDLTD DKNSPEA usage_00189.pdb 120 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE 165 usage_00404.pdb 112 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE 157 usage_00406.pdb 106 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE 151 usage_00420.pdb 111 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE 156 usage_00635.pdb 120 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE 165 WCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################