################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:49 2021 # Report_file: c_0790_36.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00088.pdb # 5: usage_00343.pdb # 6: usage_00467.pdb # 7: usage_00792.pdb # 8: usage_00958.pdb # # Length: 87 # Identity: 5/ 87 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 87 ( 17.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 87 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -NTNFIFIATGTGISPYISFLKKLFAYDKNNLY--NS-----NYTGYITIYYGVYNE-DS 51 usage_00019.pdb 1 -NTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNS-----NYTGYITIYYGVYNE-DS 53 usage_00020.pdb 1 -NTNFIFIATGTGISPYISFLKKLFAYD------RNS-----NYTGYITIYYGVYNE-DS 47 usage_00088.pdb 1 ---PIVLISGGVGLTPMVSMLKVALQ----------------APPRQVVFVHGARNS-AV 40 usage_00343.pdb 1 --TPVIMVGPGTGIAPFMGFIQERAW-----------LREQGKEVGETLLYYGCRRSDED 47 usage_00467.pdb 1 -NTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNS-----NYTGYITIYYGVYNE-DS 53 usage_00792.pdb 1 --TPLIMVGPGTGVAPFRGFVQARKQ-----------LKEQGQSLGEAHLYFGCRSPHED 47 usage_00958.pdb 1 KNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNS-----NYTGYITIYYGVYNE-DS 54 i GtG P f g y G usage_00018.pdb 52 ILYLNELEYFQKMYPNN-INIHYVFS- 76 usage_00019.pdb 54 ILYLNELEYFQKMYPNN-INIHYVFS- 78 usage_00020.pdb 48 ILYLNELEYFQKMYPNN-INIHYVFSY 73 usage_00088.pdb 41 HAMRDRLREAAKTYE-N-LDLFVFYD- 64 usage_00343.pdb 48 YLYREELARFHKDG--ALTQLNVAF-- 70 usage_00467.pdb 54 ILYLNELEYFQKMYPNN-INIHYVFS- 78 usage_00792.pdb 48 YLYQEELENAQSEG--I-ITLHTAFSR 71 usage_00958.pdb 55 ILYLNELEYFQKMYPNN-INIHYVFS- 79 ly eL k f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################