################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:28 2021 # Report_file: c_0850_41.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00092.pdb # 2: usage_00259.pdb # 3: usage_00388.pdb # 4: usage_00561.pdb # 5: usage_00562.pdb # 6: usage_00563.pdb # 7: usage_00564.pdb # # Length: 94 # Identity: 20/ 94 ( 21.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 94 ( 37.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 94 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00092.pdb 1 -SASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHL 59 usage_00259.pdb 1 ATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHL 60 usage_00388.pdb 1 ATATVFAEYADIVVRQLGDRVTHWATLNEPWCSAMLGYYLGVHAPGHTDLKRGLEASHNL 60 usage_00561.pdb 1 DSVDWFLDFARVCFEELDGIVDSWITHNEPWCAGFLSYHLGQHAPGHTDMNEAVRAVHHM 60 usage_00562.pdb 1 DSVDWFLDFARVCFEELDGIVDSWITHNEPWCAGFLSYHLGQHAPGHTDMNEAVRAVHHM 60 usage_00563.pdb 1 DSVDWFLDFARVCFEELDGIVDSWITHNEPWCAGFLSYHLGQHAPGHTDMNEAVRAVHHM 60 usage_00564.pdb 1 -SVDWFLDFARVCFEELDGIVDSWITHNEPWCAGFLSYHLGQHAPGHTDMNEAVRAVHHM 59 F a L v W T NEPwc l Y G hAPG tD ra Hh usage_00092.pdb 60 LLSHGQALQAFRALSPAGSQMGITLNFNTIY--- 90 usage_00259.pdb 61 NLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLT 94 usage_00388.pdb 61 LLGHGLAVQAMRAAAPQPLQIGIVLNLTPTYP-- 92 usage_00561.pdb 61 LLSHGKAVEMLKGEFNSATPIGITLN-------- 86 usage_00562.pdb 61 LLSHGKAVEMLKGEFNSATPIGITLN-------- 86 usage_00563.pdb 61 LLSHGKAVEMLKGEFNSATPIGITLN-------- 86 usage_00564.pdb 60 LLSHGKAVEMLKGEFNSATPIGITLN-------- 85 lL HG Av gitLN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################