################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:20 2021 # Report_file: c_1404_42.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00042.pdb # 2: usage_00044.pdb # 3: usage_00048.pdb # 4: usage_00062.pdb # 5: usage_00084.pdb # 6: usage_00087.pdb # 7: usage_00348.pdb # 8: usage_00470.pdb # 9: usage_00487.pdb # 10: usage_00490.pdb # 11: usage_00493.pdb # 12: usage_00495.pdb # 13: usage_00637.pdb # 14: usage_00790.pdb # 15: usage_00792.pdb # 16: usage_00895.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 39 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 39 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVL- 35 usage_00044.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00048.pdb 1 -NS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 35 usage_00062.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00084.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00087.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00348.pdb 1 -DESLLEDAIMELREEVVK--VNPS--MASLYNLAR--- 31 usage_00470.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00487.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00490.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00493.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00495.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEA----- 31 usage_00637.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00790.pdb 1 DNS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 36 usage_00792.pdb 1 -NS-TLQSEVKPILEKLTQ--DQDVDVKYFAQEALTVLS 35 usage_00895.pdb 1 -DN-EQSDLVHRISGDK--KLEEIPKYKDLLKLFT---- 31 l v i e k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################