################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:33 2021 # Report_file: c_0653_26.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00040.pdb # 2: usage_00240.pdb # 3: usage_00919.pdb # 4: usage_00922.pdb # 5: usage_00923.pdb # 6: usage_00925.pdb # 7: usage_00999.pdb # 8: usage_01068.pdb # 9: usage_01070.pdb # 10: usage_01071.pdb # 11: usage_01442.pdb # 12: usage_01443.pdb # 13: usage_01645.pdb # # Length: 56 # Identity: 4/ 56 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 56 ( 58.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 56 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 HMNVIVPEGAKVQAGEKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_00240.pdb 1 -AVLAKGDGE----GETVANWDPHT--PVITEV-SGFVRFTDIDGQTITRQ----- 43 usage_00919.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_00922.pdb 1 -MNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 47 usage_00923.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_00925.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_00999.pdb 1 -MNVIVPEGAKVQAGEKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 47 usage_01068.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_01070.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 usage_01071.pdb 1 -MNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 47 usage_01442.pdb 1 -MNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 47 usage_01443.pdb 1 -MNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 47 usage_01645.pdb 1 HMNVVVPEGARVEAGDKIVAAID--PEEEVIAEAEGVVHLHEPAS------ILVVK 48 mnv vpeGa G kivaaid eeviae eGvVhlhepas #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################