################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:18:14 2021 # Report_file: c_1399_77.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00083.pdb # 2: usage_00085.pdb # 3: usage_00089.pdb # 4: usage_00091.pdb # 5: usage_00095.pdb # 6: usage_00097.pdb # 7: usage_00178.pdb # 8: usage_00259.pdb # 9: usage_00671.pdb # 10: usage_00978.pdb # 11: usage_01048.pdb # 12: usage_01370.pdb # 13: usage_01386.pdb # 14: usage_01390.pdb # 15: usage_01421.pdb # 16: usage_01423.pdb # 17: usage_01425.pdb # 18: usage_01547.pdb # 19: usage_01575.pdb # # Length: 62 # Identity: 1/ 62 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 62 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 62 ( 53.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00083.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_00085.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_00089.pdb 1 -PRFLKAHW----NFLR------------TVILQLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_00091.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_00095.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_00097.pdb 1 YPRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 44 usage_00178.pdb 1 -FPALLKLDN---RQFK------------FVIDSCMWASKHDNRDVETAGLNMCLELINN 44 usage_00259.pdb 1 -PRFLRAHW----KFLK------------TVVNKLFEFMHETHDGVQDMACDTFIKIAQK 43 usage_00671.pdb 1 -SSPLQQYW-QTVVERLPEPLAEESLSAQAKSVLTF-------------SDFVQDSVIAH 45 usage_00978.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01048.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01370.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01386.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01390.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01421.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01423.pdb 1 -PRFLKAHW----NFLR------------TVILALFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01425.pdb 1 -PRFLKAHW----NFLR------------TVILQLFEFMHETHEGVQDMACDTFIKIVQK 43 usage_01547.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQ- 42 usage_01575.pdb 1 -PRFLKAHW----NFLR------------TVILKLFEFMHETHEGVQDMACDTFIKIVQK 43 L w v f usage_00083.pdb 44 CK 45 usage_00085.pdb 44 CK 45 usage_00089.pdb 44 CK 45 usage_00091.pdb 44 CK 45 usage_00095.pdb 44 CK 45 usage_00097.pdb 45 CK 46 usage_00178.pdb 45 IA 46 usage_00259.pdb 44 CR 45 usage_00671.pdb -- usage_00978.pdb 44 CK 45 usage_01048.pdb 44 CK 45 usage_01370.pdb 44 CK 45 usage_01386.pdb 44 CK 45 usage_01390.pdb 44 CK 45 usage_01421.pdb 44 CK 45 usage_01423.pdb 44 CK 45 usage_01425.pdb 44 CK 45 usage_01547.pdb -- usage_01575.pdb 44 CK 45 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################