################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:21 2021 # Report_file: c_1121_43.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00116.pdb # 2: usage_00117.pdb # 3: usage_00118.pdb # 4: usage_00119.pdb # 5: usage_00120.pdb # 6: usage_00121.pdb # 7: usage_00122.pdb # 8: usage_00210.pdb # 9: usage_00211.pdb # 10: usage_00513.pdb # 11: usage_00514.pdb # # Length: 97 # Identity: 35/ 97 ( 36.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/ 97 ( 90.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 97 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 --AKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 54 usage_00117.pdb 1 -NAKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 55 usage_00118.pdb 1 --AKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 54 usage_00119.pdb 1 --AKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 54 usage_00120.pdb 1 ---KYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 53 usage_00121.pdb 1 --AKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 54 usage_00122.pdb 1 -NAKYVAEATGNFITV-DALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 55 usage_00210.pdb 1 --AKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 55 usage_00211.pdb 1 NLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLP-PDFEGREKVSQ 59 usage_00513.pdb 1 --AKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 55 usage_00514.pdb 1 --AKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT---RDDFENRSKLID 55 kyvAeatgnFITV DaLkLnynAkDqlhPlLaELlisiNRvt dDFEnRsKlid usage_00116.pdb 55 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 91 usage_00117.pdb 56 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYAL- 91 usage_00118.pdb 55 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 91 usage_00119.pdb 55 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 91 usage_00120.pdb 54 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 90 usage_00121.pdb 55 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 91 usage_00122.pdb 56 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 92 usage_00210.pdb 56 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 92 usage_00211.pdb 60 WLQKLSSMSASDELDDSQVRQMLFDLESAYNAFNRFL 96 usage_00513.pdb 56 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 92 usage_00514.pdb 56 WIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 92 WivrinklSigDtLtetQiRelLFDLElAYksFyal #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################