################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:14 2021 # Report_file: c_0922_37.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00193.pdb # 2: usage_00258.pdb # 3: usage_00394.pdb # 4: usage_00567.pdb # # Length: 61 # Identity: 18/ 61 ( 29.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 61 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 61 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00193.pdb 1 GPVAVAVDAS---SWMTYTGGVMT--SCVSEQLDHGVLLVGYN-DS-AA---VPYWIIK- 49 usage_00258.pdb 1 GPISVAIDAGHESF-LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTE-SDNNKYWLVKN 58 usage_00394.pdb 1 GPVSVGIDASHSSF-FFYKSGVYDDPSCTG-NVNHGVLVVGYGTLD--G---KDYWLVK- 52 usage_00567.pdb 1 GPISVAIDAGHESF-LFYKEGIYFEPDCSSEDMDHGVLVVGYGFES-----NNKYWLVKN 54 GP sVaiDA f fYk G y C s dHGVLvVGYg s YWlvK usage_00193.pdb - usage_00258.pdb 59 S 59 usage_00394.pdb - usage_00567.pdb 55 S 55 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################