################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:16 2021 # Report_file: c_0669_146.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00911.pdb # 2: usage_01132.pdb # 3: usage_01535.pdb # 4: usage_01537.pdb # 5: usage_01677.pdb # 6: usage_01685.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 60 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 60 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00911.pdb 1 -IRQKTKKAVVSILDS-------EEVCVELVKEYA--SQEYVKEVLQISSDGNTITIY-- 48 usage_01132.pdb 1 VNIEVKDRVLTIA-FKGAKVDHFTKFIVKTNS-------KWLAAAKVSGN----ANFVNS 48 usage_01535.pdb 1 -TRYKTKNAIMSILRN-------GEVVLEFLKFRPTYNEDRINDICRISDDGQRIIIYQ- 51 usage_01537.pdb 1 -TRYKTKNAIMSILRN-------GEVVLEFLKFRPTYNEDRINDICRISDDGQRIIIYQ- 51 usage_01677.pdb 1 PIRQKTKKAVVSILDS-------EEVCVELVKEYA--SQEYVKEVLQISSDGNTITIYY- 50 usage_01685.pdb 1 PTRYKTKNAIMSILRN-------GEVVLEFLKFRPTYNEDRINDICRISDDGQRIIIY-- 51 r ktk a si ev e k is i iy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################