################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:39 2021 # Report_file: c_1076_141.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00411.pdb # 2: usage_01124.pdb # 3: usage_01353.pdb # 4: usage_01354.pdb # 5: usage_01355.pdb # # Length: 80 # Identity: 34/ 80 ( 42.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 80 ( 53.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 80 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00411.pdb 1 FFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPL 60 usage_01124.pdb 1 -LRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPL 59 usage_01353.pdb 1 LFKDVVYAIAESAFKVS-DYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPL 59 usage_01354.pdb 1 QFKDVVHAIAECAFKVS-EYPVILSFENHCSVPQQKLLAQYCHEAFGELLLDNPIDGHPL 59 usage_01355.pdb 1 QFKDVVHAIAECAFKVS-EYPVILSFENHCSVPQQKLLAQYCHEAFGELLLDNPIDGHPL 59 fkdv AIAE AFK S S QQ A YC FG LL P d PL usage_00411.pdb 61 KPGVPLPSPEDLRGKILIKN 80 usage_01124.pdb 60 APGVPLPSPQDLMGRILVKN 79 usage_01353.pdb 60 KPGVPLPTPYDLRKKILIKN 79 usage_01354.pdb 60 KPGVPLPTPYDLRKKILIKN 79 usage_01355.pdb 60 KPGVPLPTPYDLRKKILIKN 79 kPGVPLP P DLr kILiKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################