################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:25 2021 # Report_file: c_0101_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00180.pdb # 5: usage_00182.pdb # 6: usage_00220.pdb # 7: usage_00232.pdb # 8: usage_00260.pdb # 9: usage_00261.pdb # 10: usage_00304.pdb # 11: usage_00307.pdb # 12: usage_00308.pdb # # Length: 255 # Identity: 158/255 ( 62.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 161/255 ( 63.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/255 ( 34.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -HQ--TYQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00031.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00032.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00180.pdb 1 H--QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 58 usage_00182.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00220.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00232.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00260.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00261.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00304.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00307.pdb 1 ---QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 57 usage_00308.pdb 1 H--QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT 58 ycQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT usage_00001.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-DLKICDFGLARVADPDH 116 usage_00031.pdb 58 QHLSND-ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 116 usage_00032.pdb 58 QHLSND-ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 116 usage_00180.pdb 59 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV----- 113 usage_00182.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 117 usage_00220.pdb 58 QHLSND-ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 116 usage_00232.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 117 usage_00260.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 117 usage_00261.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFDLARVADPDH 117 usage_00304.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-DLKICDFGLARVADPDH 116 usage_00307.pdb 58 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-DLKICDFGLARVADPDH 116 usage_00308.pdb 59 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 118 QHLSND ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT DLKICDFgLARV usage_00001.pdb 117 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 175 usage_00031.pdb 117 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 175 usage_00032.pdb 117 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 175 usage_00180.pdb 114 -------------RWYRAPEIM------TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 154 usage_00182.pdb 118 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 176 usage_00220.pdb 117 DH----LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 172 usage_00232.pdb 118 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 176 usage_00260.pdb 118 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 176 usage_00261.pdb 118 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 176 usage_00304.pdb 117 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 175 usage_00307.pdb 117 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 175 usage_00308.pdb 119 D-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 177 RWYRAPEIM TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL usage_00001.pdb 176 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS--------------- 204 usage_00031.pdb 176 NHILGILGSPSQEDLNCIIN--KARNYLLSLPHKNKVPWNRLFP-NADSKALDLLDKMLT 232 usage_00032.pdb 176 NHILGILGSPSQ--------EDKARNYLLSLPHKNKVPWNRLFP-NADSKALDLLDKMLT 226 usage_00180.pdb 155 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS--------------- 183 usage_00182.pdb 177 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS--------------- 205 usage_00220.pdb 173 NHILGILGSPSQEDLNC-----------LSLPHKNKVPWNRLFP-NADSKALDLLDKMLT 220 usage_00232.pdb 177 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS-------------L- 206 usage_00260.pdb 177 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS-------------L- 206 usage_00261.pdb 177 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS-------------L- 206 usage_00304.pdb 176 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS--------------- 204 usage_00307.pdb 176 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS--------------- 204 usage_00308.pdb 178 NHILGILGSPSQEDLNCIIN--LK--------------ARNYLLS-------------L- 207 NHILGILGSPSQ usage_00001.pdb --------------- usage_00031.pdb 233 FNPHKRIEVEQALAH 247 usage_00032.pdb 227 FNPHKRIEVEQALAH 241 usage_00180.pdb --------------- usage_00182.pdb --------------- usage_00220.pdb 221 FNPHKRIEVEQALAH 235 usage_00232.pdb --------------- usage_00260.pdb --------------- usage_00261.pdb --------------- usage_00304.pdb --------------- usage_00307.pdb --------------- usage_00308.pdb --------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################