################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:12 2021 # Report_file: c_1133_33.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00356.pdb # 2: usage_00357.pdb # 3: usage_00358.pdb # 4: usage_00359.pdb # 5: usage_00360.pdb # 6: usage_00729.pdb # 7: usage_00730.pdb # 8: usage_00731.pdb # # Length: 70 # Identity: 50/ 70 ( 71.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 70 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 70 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00356.pdb 1 SAFYFVMDFFKKMA----SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 50 usage_00357.pdb 1 SAFYFVMDFFKKMAND--SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEYCFSGTY 58 usage_00358.pdb 1 SAFYFVMDFFKKMA----SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 50 usage_00359.pdb 1 SAFYFVMDFFKKMA----SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 50 usage_00360.pdb 1 SAFYFVMDFFKKMANDSVSSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 54 usage_00729.pdb 1 SAFYFVMDFFKKMA----SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 50 usage_00730.pdb 1 SAFYFVMDFFKKMANDSVSSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 54 usage_00731.pdb 1 SAFYFVMDFFKKMA----SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY------ 50 SAFYFVMDFFKKMA SSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEY usage_00356.pdb ---------- usage_00357.pdb 59 ILSLLLQGYN 68 usage_00358.pdb ---------- usage_00359.pdb ---------- usage_00360.pdb ---------- usage_00729.pdb ---------- usage_00730.pdb ---------- usage_00731.pdb ---------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################