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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:39 2021
# Report_file: c_1296_47.html
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#====================================
# Aligned_structures: 8
#   1: usage_00685.pdb
#   2: usage_01157.pdb
#   3: usage_01202.pdb
#   4: usage_01203.pdb
#   5: usage_01541.pdb
#   6: usage_01542.pdb
#   7: usage_01543.pdb
#   8: usage_01544.pdb
#
# Length:         57
# Identity:       37/ 57 ( 64.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     45/ 57 ( 78.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           12/ 57 ( 21.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00685.pdb         1  NLGGLLLQALLEYWPRTHVNP-MD-----KGNGYFQVPPHTPVIFGEAGGRTLFRLL   51
usage_01157.pdb         1  --GGLLLQALLEYWPRTHV-NP-M---VQKGNGYFQVPPHTPVIFGEAGRTLFRLL-   49
usage_01202.pdb         1  NLGGLLLQALLEYWPRTHV-N--PMNRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLL   54
usage_01203.pdb         1  --GGLLLQALLEYWPRTHV-N-------QKGNGYFQVPPHTPVIFGEAGGRTLFRLL   47
usage_01541.pdb         1  NLGGLLLQALLEYWPRTHV-NP-M---VQKGNGYFQVPPHTPVIFGEAGGRTLFRLL   52
usage_01542.pdb         1  NLGGLLLQALLEYWPRTHV-NP-M---VQKGNGYFQVPPHTPVIFGEAGGRTLFRLL   52
usage_01543.pdb         1  NLGGLLLQALLEYWPRTHV-NP-M---VQKGNGYFQVPPHTPVIFGEAGGRTLFRLL   52
usage_01544.pdb         1  NLGGLLLQALLEYWPRTHE-N-------QKGNGYFQVPPHTPVIFGEAGGRTLFRLL   49
                             GGLLLQALLEYWPRTHv n        KGNGYFQVPPHTPVIFGEAGgrtlfrL 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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