################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:07 2021 # Report_file: c_0884_17.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00054.pdb # # Length: 89 # Identity: 45/ 89 ( 50.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/ 89 ( 74.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 89 ( 3.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 AEDVDAAVAAARAALKRNRGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKP 60 usage_00009.pdb 1 AEDVDAAVAAARAALKRNRGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKP 60 usage_00010.pdb 1 AEDVDIAVEAARKAIAR---DDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKT 57 usage_00054.pdb 1 KEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKP 60 aEDVD AV AAr A R rDW a Ga RAkYLRAIAAKv E K eLakLE lDcGKp usage_00008.pdb 61 YDEAAWDMDDVAGCFEYFADQAEALDKRQ 89 usage_00009.pdb 61 YDEAAWDMDDVAGCFEYFADQAEALDKRQ 89 usage_00010.pdb 58 LYESAADMDDVAGCFEYYAGLAEALDSRR 86 usage_00054.pdb 61 LEEALADLDDVVACFEYYAGLAEELDSKQ 89 Eaa DmDDVagCFEY A AEaLD rq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################