################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:50 2021 # Report_file: c_0302_35.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00081.pdb # 4: usage_00121.pdb # 5: usage_00122.pdb # 6: usage_00199.pdb # 7: usage_00200.pdb # 8: usage_00201.pdb # 9: usage_00320.pdb # 10: usage_00321.pdb # 11: usage_00322.pdb # 12: usage_00323.pdb # 13: usage_00331.pdb # 14: usage_00363.pdb # # Length: 155 # Identity: 30/155 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/155 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/155 ( 18.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 ----AFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIE 56 usage_00077.pdb 1 ----AFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIE 56 usage_00081.pdb 1 QLSIGYV-PTGFLHDGHLSLVKHAKT-QDKVIVSIFVNP-QFGPNEDFSSYPRDLERDIK 57 usage_00121.pdb 1 ----GFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRA 56 usage_00122.pdb 1 ----GFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRA 56 usage_00199.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQFG----D-AYPRQIDKDLE 55 usage_00200.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQF----DFDAYPRQIDKDLE 56 usage_00201.pdb 1 GTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLE 60 usage_00320.pdb 1 --KIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAG 58 usage_00321.pdb 1 --KIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGAN---------LERDAG 49 usage_00322.pdb 1 GKKIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAG 60 usage_00323.pdb 1 --KIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGAN--------DLERDAG 50 usage_00331.pdb 1 ----GFV-PTGYLHRGHLALVERARRENPFVVASVFVNPLQFGPGEDYHRYPRDLERDRA 55 usage_00363.pdb 1 QLSIGYV-PTGFLHDGHLSLVKHAKT-QDKVIVSIFVNP-QFGPNEDFSSYPRDLERDIK 57 G LH GHL S FVN QF D usage_00076.pdb 57 KLQKENVYVLFAPTERDMYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACV 116 usage_00077.pdb 57 KLQKENVYVLFAPTERDMYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACV 116 usage_00081.pdb 58 C-QDNGV-DVFIPDATQY-LKNFSTYVD--NTITDKLCGAKRPGHFRGVCTVLTKFFNIL 112 usage_00121.pdb 57 LLQEAGVDLLFAPGVEEMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLV 116 usage_00122.pdb 57 LLQEAGVDLLFAPGVEEMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLV 116 usage_00199.pdb 56 LVSEVGADIVFHPAVEDMYPGELGIDVKV-GPLADVLEGAKRPGHFDGVVTVVNKLFNIV 114 usage_00200.pdb 57 LVSEVGADIVFHPAVEDMYPGELGIDVKV-GPLADVLEGAKRPGHFDGVVTVVNKLFNIV 115 usage_00201.pdb 61 LVSEVGADIVFHPAVEDMYPGELGIDVKV-GPLADVLEGAKRPGHFDGVVTVVNKLFNIV 119 usage_00320.pdb 59 LLHDAQVDYLFAPTVSDMYPRPMQTVVDV-PPLGNQIEGEARPGHFAGVATVVSKLFNIV 117 usage_00321.pdb 50 LLHDAQVDYLFAPTVSDMYPRPMQTVVDV-PPLGNQIEGEARPGHFAGVATVVSKLFNIV 108 usage_00322.pdb 61 LLHDAQVDYLFAPTVSDMYPRPMQTVVDV-PPLGNQIEGEARPGHFAGVATVVSKLFNIV 119 usage_00323.pdb 51 LLHDAQVDYLFAPTVSDMYPRPMQTVVDV-PPLGNQIEGE--PGHFAGVATVVSKLFNIV 107 usage_00331.pdb 56 LLQEAGVDLLFAPGVEEY-PEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLV 114 usage_00363.pdb 58 C-QDNGV-DVFIPDATQY-LKNFSTYVD--NTITDKLCGAKRPGHFRGVCTVLTKFFNIL 112 F P V G PG F GV TV usage_00076.pdb 117 QPRVAVFGKKDYQQLMIVRRMCQQLALPVEIVAAE 151 usage_00077.pdb 117 QPRVAVFGKKDYQQLMIVRRMCQQLALPVEIVAAE 151 usage_00081.pdb 113 NPDIVY-GQKDAQQCVVVRH-VDDLNFDLKIQICP 145 usage_00121.pdb 117 QPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVP 151 usage_00122.pdb 117 QPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVP 151 usage_00199.pdb 115 MPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGID 149 usage_00200.pdb 116 MPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGID 150 usage_00201.pdb 120 MPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGID 154 usage_00320.pdb 118 GPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVE 152 usage_00321.pdb 109 GPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVE 143 usage_00322.pdb 120 GPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVE 154 usage_00323.pdb 108 GPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVE 142 usage_00331.pdb 115 QPQRAYFGEKDYQQLLVVRRVRDLGFP-VEVVGVP 148 usage_00363.pdb 113 NPDIVY-GQKDAQQCVVVRH-VDDLNFDLKIQICP 145 P G KD QQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################