################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:37 2021 # Report_file: c_0490_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00048.pdb # 2: usage_00049.pdb # 3: usage_00050.pdb # 4: usage_00051.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00124.pdb # # Length: 80 # Identity: 19/ 80 ( 23.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/ 80 ( 63.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 80 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 MDFAISKLKKAG---NQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENEEY 57 usage_00049.pdb 1 MDFAISKLKKAG---NQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENEEY 57 usage_00050.pdb 1 MDFAISKLKKAG---NQTGLYVLRCSPKDFNKYFLTF-------IEYKHCLITKNENEEY 50 usage_00051.pdb 1 MDFAISKLKKA-------GLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENEEY 53 usage_00052.pdb 1 MDFAISKLKKAG---NQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENEEY 57 usage_00053.pdb 1 MDFAISKL-------NQTGLYVLRCSPKDFNKYFLTF--------EYKHCLITKNENEEY 45 usage_00124.pdb 1 ------------QEGSEEGMYVLRWSCTDFDNILMTVTCFEK-QKQFKNFQIEVQ-KGRY 46 GlYVLRcSpkDFnkyflTf eyKhclItkn neeY usage_00048.pdb 58 NLSGTKKNFSSLKDLLNCY- 76 usage_00049.pdb 58 NLSGTKKNFSSLKDLLNCY- 76 usage_00050.pdb 51 NLSGTKKNFSSLKDLLNCY- 69 usage_00051.pdb 54 NLSGTKKNFSSLKDLLNCY- 72 usage_00052.pdb 58 NLSGTKKNFSSLKDLLNCY- 76 usage_00053.pdb 46 NLSGTKKNFSSLKDLLNC-- 63 usage_00124.pdb 47 SLHGSDRSFPSLGDLMSHLK 66 nLsGtkknFsSLkDLlnc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################