################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:09 2021 # Report_file: c_0943_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00201.pdb # 4: usage_00316.pdb # 5: usage_00317.pdb # 6: usage_00318.pdb # 7: usage_00327.pdb # 8: usage_00328.pdb # 9: usage_00329.pdb # 10: usage_00330.pdb # 11: usage_00551.pdb # 12: usage_00661.pdb # # Length: 51 # Identity: 8/ 51 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 51 ( 23.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 51 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 -AK-NTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSI-A 48 usage_00086.pdb 1 -AK-NTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSI-A 48 usage_00201.pdb 1 AKC-TY-GTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSI- 48 usage_00316.pdb 1 EAKNTY-GTGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGA-- 48 usage_00317.pdb 1 AKN-TY-GTGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGAIA 49 usage_00318.pdb 1 EAK-NTYGTGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGAIA 50 usage_00327.pdb 1 EAK-NT-YGGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGAIA 49 usage_00328.pdb 1 EAK-NT-YGGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGAIA 49 usage_00329.pdb 1 EAK-NT-YGGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGA-- 47 usage_00330.pdb 1 EAK-NT-YGGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGA-- 47 usage_00551.pdb 1 -LK-STYGTGCFALLNTGK--VRSKNRLLTTIAYRLDG--ETTYALEGSIF 45 usage_00661.pdb 1 AKN-TY-GTGCFLLMNVGEEARFSKHGLLSTVGFQVGRDGPCYYALEGAIA 49 G FlL N G Sk gLl T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################