################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:02 2021 # Report_file: c_0722_20.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00084.pdb # 2: usage_00143.pdb # 3: usage_00151.pdb # 4: usage_00317.pdb # 5: usage_00364.pdb # 6: usage_00406.pdb # 7: usage_00424.pdb # # Length: 65 # Identity: 2/ 65 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 65 ( 27.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 65 ( 44.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 ------FMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTN--A 51 usage_00143.pdb 1 ------FQVINDGDKPKVQVSYK-GETKAFYPEEISSMVLTKMKEIAEAYLGYPVTN--A 51 usage_00151.pdb 1 KVKIQG-EFLLTK-KPY-LPISE--RKTIRMEEIAEKARNFD----------ELRLAVV- 44 usage_00317.pdb 1 ------FMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTN--A 51 usage_00364.pdb 1 ------FQVINDGDKPKVQVSYK-GETKAFYPEEISSMVLTKMKEIAEAYLGYPVTN--A 51 usage_00406.pdb 1 ------FKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTH--A 52 usage_00424.pdb 1 ------FMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTN--A 51 v P qv tk f pEe s mvltk vt usage_00084.pdb 52 VVTVP 56 usage_00143.pdb 52 VITVP 56 usage_00151.pdb ----- usage_00317.pdb 52 VVTVP 56 usage_00364.pdb 52 VITVP 56 usage_00406.pdb 53 V---- 53 usage_00424.pdb 52 VVTVP 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################