################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:21 2021 # Report_file: c_0926_4.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00040.pdb # 2: usage_00094.pdb # 3: usage_00165.pdb # 4: usage_00166.pdb # 5: usage_00177.pdb # 6: usage_00178.pdb # 7: usage_00179.pdb # 8: usage_00194.pdb # 9: usage_00247.pdb # 10: usage_00405.pdb # # Length: 82 # Identity: 0/ 82 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 82 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 68/ 82 ( 82.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-ATERV--------- 40 usage_00094.pdb 1 ------GTTDI-----NTTVKT---------------GDLVTYD-------KENGMAKKV 27 usage_00165.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-ATERV--------- 40 usage_00166.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-ATERV--------- 40 usage_00177.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-STERV--------- 40 usage_00178.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-STERV--------- 40 usage_00179.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-STERV--------- 40 usage_00194.pdb 1 ---DVE--WDPSG---RYVATW-----ASAWKHTMENGYHLYD--FKGELL--------- 36 usage_00247.pdb 1 LQFYVN-YPN----SGSVSAYGPGLVY-GVANKT--ATFTIV-T---------------- 35 usage_00405.pdb 1 -VYTDA-YPLNPTGSIVSSVIL------DSQKSR--VNPVITYST-ATERV--------- 40 usage_00040.pdb 41 ---------NELAI-R------ 46 usage_00094.pdb 28 FYSFIDDKNKLLVI-R------ 42 usage_00165.pdb 41 ---------NELAI-L------ 46 usage_00166.pdb 41 ---------NELAI-L------ 46 usage_00177.pdb 41 ---------NELAI-R------ 46 usage_00178.pdb 41 ---------NELAI-R------ 46 usage_00179.pdb 41 ---------NELAI-R------ 46 usage_00194.pdb 37 ---------REEHI-E------ 42 usage_00247.pdb 36 --------------EDGLDLAI 43 usage_00405.pdb 41 ---------NELAI-L------ 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################