################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:21 2021 # Report_file: c_0923_95.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00542.pdb # 2: usage_00556.pdb # 3: usage_00642.pdb # 4: usage_00886.pdb # 5: usage_01017.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 62 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 62 ( 80.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00542.pdb 1 ------TVVRT--GDRVL--LATDHAGSVPLYTCVA-P-GEVRAST-------------- 34 usage_00556.pdb 1 ------TVVRT--GDRVL--LATDHAGSVPLYTCVA-P-GEVRAST-------------- 34 usage_00642.pdb 1 --------------P-TH--VKVN-DE-WIEVANPK---DAVIVVY--PEEKRAET---- 32 usage_00886.pdb 1 KAVETPKKVFAVANGVLY--SVGKE--A-PHEAKIF-D---------------------- 32 usage_01017.pdb 1 F------------GVQFNWH--SKE--GDPLVFATVGSNRVTLYECHS--QGEIRLLQSY 42 p usage_00542.pdb -- usage_00556.pdb -- usage_00642.pdb -- usage_00886.pdb -- usage_01017.pdb 43 VD 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################