################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:59 2021 # Report_file: c_0033_7.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00022.pdb # 2: usage_00023.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00087.pdb # 6: usage_00120.pdb # 7: usage_00121.pdb # # Length: 242 # Identity: 72/242 ( 29.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/242 ( 47.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/242 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 TIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHV 60 usage_00023.pdb 1 TIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHV 60 usage_00024.pdb 1 TIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHV 60 usage_00025.pdb 1 TIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHV 60 usage_00087.pdb 1 KIITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAV 60 usage_00120.pdb 1 TVLTAMITPFKADGSVNYAVAAELAAHLVDNGTDTLVVCGTTGESPTLSWDEEYNLFVEV 60 usage_00121.pdb 1 TVLTAMITPFKADGSVNYAVAAELAAHLVDNGTDTLVVCGTTGESPTLSWDEEYNLFVEV 60 t TAm TPF G a L L dngT vv GTTgESPTL E L V usage_00022.pdb 61 VSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG-VDAVMLVAPYYNKPSQEGMYQHFKAI 119 usage_00023.pdb 61 VSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG-VDAVMLVAPYYNKPSQEGMYQHFKAI 119 usage_00024.pdb 61 VSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG-VDAVMLVAPYYNKPSQEGMYQHFKAI 119 usage_00025.pdb 61 VSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG-VDAVMLVAPYYNKPSQEGMYQHFKAI 119 usage_00087.pdb 61 QKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAI 120 usage_00120.pdb 61 LQTVAGKAKVIAGCGSNSTKEAIAATQKAAKIG-VHGTLQVVPYYNKPPQAGLYQHFQAI 119 usage_00121.pdb 61 LQTVAGKAKVIAGCGSNSTKEAIAATQKAAKIG-VHGTLQVVPYYNKPPQAGLYQHFQAI 119 V vIAG GsN T I t ka G v v PYYNKP Q G YQHF AI usage_00022.pdb 120 AEST-PLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIDAGGDVLTMTEIIEKTADDFA 178 usage_00023.pdb 120 AEST-PLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIDAGGDVLTMTEIIEKTADDFA 178 usage_00024.pdb 120 AEST-PLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIDAGGDVLTMTEIIEKTADDFA 178 usage_00025.pdb 120 AEST-PLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIDAGGDVLTMTEIIEKTADDFA 178 usage_00087.pdb 121 ADAS-DLPIIIYNIPGRVVVELTPETMLRLADHPNIIGVECT-SLANMAYLIEHKPEEFL 178 usage_00120.pdb 120 AQACPDLPLLLYNVPGRTGQNLSPETVVRLAEIDNIIGVEASGNLDQAGEIRRSTPKEFQ 179 usage_00121.pdb 120 AQACPDLPLLLYNVPGRTGQNLSPETVVRLAEIDNIIGVEASGNLDQAGEIRRSTPKEFQ 179 A LP lYNvPGR s TvvRL ei NI a ei t F usage_00022.pdb 179 VYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVRVTDS 238 usage_00023.pdb 179 VYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVRVTDS 238 usage_00024.pdb 179 VYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVRVTDS 238 usage_00025.pdb 179 VYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVRVTDS 238 usage_00087.pdb 179 IYTGEDGDAFHAMNLGADGVISVASHTNGDEMHEMFTAIAESDMKKAAAIQRKFIPKVNA 238 usage_00120.pdb 180 IYAGDDSLTLPLLAIGAKGVVSVASHLVGNQLQQMIQAFNSGQVTVASDIHLRLL----- 234 usage_00121.pdb 180 IYAGDDSLTLPLLAIGAKGVVSVASHLVGNQLQQMIQAFNSGQVTVASDIHLRL------ 233 Y GdD ltlp a GAkG vSVASH Gn q Mi Af g A h l usage_00022.pdb 239 LF 240 usage_00023.pdb 239 LF 240 usage_00024.pdb 239 LF 240 usage_00025.pdb 239 LF 240 usage_00087.pdb 239 L- 239 usage_00120.pdb -- usage_00121.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################