################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:08 2021 # Report_file: c_0654_62.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00249.pdb # 2: usage_00250.pdb # 3: usage_00426.pdb # 4: usage_00502.pdb # 5: usage_00611.pdb # 6: usage_00612.pdb # # Length: 71 # Identity: 7/ 71 ( 9.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 71 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 71 ( 57.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00249.pdb 1 YMAYLMIW-------DQKSLKRCGGFLIQDDFVLTAAHCW--GSSINVTLGAHNIKEQEP 51 usage_00250.pdb 1 YMAYLMIW-------DQKSLKRCGGFLIQDDFVLTAAHCW--GSSINVTLGAHNIKEQEP 51 usage_00426.pdb 1 --AYLQIQSPA-------GQSRCGGFLVREDFVLTAAHCW--GSNINVTLGAHNIQRREN 49 usage_00502.pdb 1 -----------KIRSLCQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYA---------- 39 usage_00611.pdb 1 -MAFVQFL-------QEKSRKRCGGILVRKDFVLTAAHCQ--GSSINVTLGAHNIKEQER 50 usage_00612.pdb 1 YMAFVQFL-------QEKSRKRCGGILVRKDFVLTAAHCQ--GSSINVTLGAHNIKEQER 51 rcgG l DfVlTaAHc gs inVtl usage_00249.pdb 52 TQQFIP----- 57 usage_00250.pdb 52 TQQFIP----- 57 usage_00426.pdb 50 TQQHIT----- 55 usage_00502.pdb 40 ------DKPFE 44 usage_00611.pdb 51 TQQFIP----- 56 usage_00612.pdb 52 TQQFIP----- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################