################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:30:17 2021 # Report_file: c_0330_4.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00024.pdb # 6: usage_00025.pdb # 7: usage_00062.pdb # 8: usage_00063.pdb # 9: usage_00077.pdb # 10: usage_00078.pdb # 11: usage_00079.pdb # 12: usage_00080.pdb # 13: usage_00087.pdb # 14: usage_00088.pdb # 15: usage_00089.pdb # 16: usage_00090.pdb # 17: usage_00101.pdb # 18: usage_00102.pdb # 19: usage_00103.pdb # 20: usage_00104.pdb # 21: usage_00105.pdb # 22: usage_00106.pdb # 23: usage_00109.pdb # 24: usage_00110.pdb # 25: usage_00111.pdb # 26: usage_00112.pdb # 27: usage_00113.pdb # # Length: 181 # Identity: 75/181 ( 41.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/181 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/181 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 --DAFSRVVVTSDA-KAAYV---GGSDLQSLKSFINDGNKRLDAVNYIVSNASCIVSDAV 54 usage_00015.pdb 1 --DAFSRVVVTSDA-KAAYV---GGSDLQSLKSFINDGNKRLDAVNYIVSNASCIVSDAV 54 usage_00022.pdb 1 ----DAFSRV----V-AAY--VGGADLQALKKFI-SEGNKRLDSVNSIVSNASCIVSDAV 48 usage_00023.pdb 1 --F-SRVVTN---A-DSKAAYVGGADLQALKKFI-SEGNKRLDSVNSIVSNASCIVSDAV 52 usage_00024.pdb 1 -----SRVISNADA-KAAYV---GGSDLQALRTFISDGNKRLDAVNYIVSNSSCIVSDAI 51 usage_00025.pdb 1 --DAFSRVISNADA-KAAYV---GGSDLQALRTFISDGNKRLDAVNYIVSNSSCIVSDAI 54 usage_00062.pdb 1 --DAFSKAVVSADQ-KTGYI---GGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAV 54 usage_00063.pdb 1 --DAFSKAVVSADQ-KTGYI---GGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAV 54 usage_00077.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKSFIADGNKRLDAVNSIVSNASCMVSDAV 54 usage_00078.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKSFIADGNKRLDAVNSIVSNASCMVSDAV 54 usage_00079.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKSFIADGNKRLDAVNSIVSNASCMVSDAV 54 usage_00080.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKSFIADGNKRLDAVNSIVSNASCMVSDAV 54 usage_00087.pdb 1 --FSKVITS----A-DGKAAYVGGADLQALKKFV-SDGNKRMDAVNAIVSNASCIVSDAV 52 usage_00088.pdb 1 DAFSKVITS----A-DGKAAYVGGADLQALKKFV-SDGNKRMDAVNAIVSNASCIVSDAV 54 usage_00089.pdb 1 DAFSKVITS----A-DGKAAYVGGADLQALKKFV-SEGNKRMDSVNAIVSNASCIVSDSV 54 usage_00090.pdb 1 DAFSKVITS----A-DGKAAYVGGADLQALKKFV-SEGNKRMDSVNAIVSNASCIVSDSV 54 usage_00101.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 54 usage_00102.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 54 usage_00103.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 54 usage_00104.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 54 usage_00105.pdb 1 -----------------------GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 37 usage_00106.pdb 1 --DAFSRVVVNSDA-KAAYV---GGSDLQALKKFITDGNKRLDSVSFVVSNASCIVSDAV 54 usage_00109.pdb 1 --F-SRVVTN---A-DSKAAYVGGADLQALKKFI-SEGNKRLDSVNSIVSNASCIVSDAV 52 usage_00110.pdb 1 DAFSRVVTA------DSKAAYVGGADLQALKKFI-SEGNKRLDSVNSIVSNASCIVSDAV 53 usage_00111.pdb 1 --F-SRVVTN---A-DSKAAYVGGADLQALKKFI-SEGNKRLDSVNSIVSNASCIVSDAV 52 usage_00112.pdb 1 --DAFSRVVVNSDS-KAAYV---SGSDLQALKTFINDGNKRLDAVNYIVSNSSCIVSDAI 54 usage_00113.pdb 1 --DAFSRVVVNSDS-KAAYV---SGSDLQALKTFINDGNKRLDAVNYIVSNSSCIVSDAI 54 GNKR D V SN SC VSD usage_00014.pdb 55 SGMICENPGLIAPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDSSVLDDRCLNGLKET 113 usage_00015.pdb 55 SGMICENPGLIAPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDSSVLDDRCLNGLKET 113 usage_00022.pdb 49 SGMICENPSLISPSG-CYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKET 107 usage_00023.pdb 53 SGMICENPSLISPSG-CYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKET 111 usage_00024.pdb 52 SGMICENPGLITPGG-CYTNRRMAACLRDGEIILRYISYALLAGDSSVLEDRCLNGLKET 110 usage_00025.pdb 55 SGMICENPGLITPGG-CYTNRRMAACLRDGEIILRYISYALLAGDSSVLEDRCLNGLKET 113 usage_00062.pdb 55 SGMICENPGLISAGG-CYTNRRMAACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKET 113 usage_00063.pdb 55 SGMICENPGLISAGG-CYTNRRMAACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKET 113 usage_00077.pdb 55 SGMICENPGLISPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 113 usage_00078.pdb 55 SGMICENPGLISPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 113 usage_00079.pdb 55 SGMICENPGLISPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 113 usage_00080.pdb 55 SGMICENPGLISPGG-CYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 113 usage_00087.pdb 53 SGMVCENPALIAPNGGVYSNRKMAACLRDAEIILRYVSYSLLSGDSSVLEDRCLNGLKET 112 usage_00088.pdb 55 SGMVCENPALIAPNGGVYSNRKMAACLRDAEIILRYVSYSLLSGDSSVLEDRCLNGLKET 114 usage_00089.pdb 55 SGMVCENPSLIAPNGGVYTNRKMAACLRDAEIILRYVSYSLLSGDSSVLEDRCLNGLKET 114 usage_00090.pdb 55 SGMVCENPSLIAPNGGVYTNRKMAACLRDAEIILRYVSYSLLSGDSSVLEDRCLNGLKET 114 usage_00101.pdb 55 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 114 usage_00102.pdb 55 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 114 usage_00103.pdb 55 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 114 usage_00104.pdb 55 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 114 usage_00105.pdb 38 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 97 usage_00106.pdb 55 SGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYASYALLAGDPSVLEDRCLNGLKET 114 usage_00109.pdb 53 SGMICENPSLISPSG-CYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKET 111 usage_00110.pdb 54 SGMICENPSLISPSG-CYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKET 112 usage_00111.pdb 53 SGMICENPSLISPSG-CYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKET 111 usage_00112.pdb 55 SGMICENPGLITPGGNCYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 114 usage_00113.pdb 55 SGMICENPGLITPGGNCYTNRRMAACLRDGEIILRYVSYALLAGDASVLEDRCLNGLKET 114 SGM CENP LI G Y NR MAACLRD EI LRY Y LL GD SVL DRCLNGLKET usage_00014.pdb 114 YIALGVPTASSSRAVSIMKATATAFITNTASGRKVEVAAGDCQALQAEAASYFDKVGSSI 173 usage_00015.pdb 114 YIALGVPTASSSRAVSIMKATATAFITNTASGRKVEVAAGDCQALQAEAASYFDKVGSSI 173 usage_00022.pdb 108 YSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAI 167 usage_00023.pdb 112 YSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAI 171 usage_00024.pdb 111 YIALGVPTNSTVRAVSIMKAAVGAFISNTASQRKGEVIEGDCSALAAEIASYCDRISAAV 170 usage_00025.pdb 114 YIALGVPTNSTVRAVSIMKAAVGAFISNTASQRKGEVIEGDCSALAAEIASYCDRISAAV 173 usage_00062.pdb 114 YMALGVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAALASEAGSYFDMAASAL 173 usage_00063.pdb 114 YMALGVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAALASEAGSYFDMAASAL 173 usage_00077.pdb 114 YIALGVPTNSSIRAVSIMKAQAVAFITNTATERKMSFAAGDCTSLASEVASYFDRVGAAI 173 usage_00078.pdb 114 YIALGVPTNSSIRAVSIMKAQAVAFITNTATERKMSFAAGDCTSLASEVASYFDRVGAAI 173 usage_00079.pdb 114 YIALGVPTNSSIRAVSIMKAQAVAFITNTATERKMSFAAGDCTSLASEVASYFDRVGAAI 173 usage_00080.pdb 114 YIALGVPTNSSIRAVSIMKAQAVAFITNTATERKMSFAAGDCTSLASEVASYFDRVGAAI 173 usage_00087.pdb 113 YASLGVPAAGNARAVAIMKATVNGFINNTAQQKKLSTPAGDCSALASEAGGYFDKVSSAL 172 usage_00088.pdb 115 YASLGVPAAGNARAVAIMKATVNGFINNTAQQKKLSTPAGDCSALASEAGGYFDKVSSAL 174 usage_00089.pdb 115 YASLGVPAAGNARTISIMKATVIGFITNNSQQKKLSTPAGDCSALASEVGGYFDKVSSAL 174 usage_00090.pdb 115 YASLGVPAAGNARTISIMKATVIGFITNNSQQKKLSTPAGDCSALASEVGGYFDKVSSAL 174 usage_00101.pdb 115 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 174 usage_00102.pdb 115 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 174 usage_00103.pdb 115 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 174 usage_00104.pdb 115 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 174 usage_00105.pdb 98 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 157 usage_00106.pdb 115 YIALGVPTNSSVRAVSIMKASATAFVSGTASDRKMACPDGDCSALASELGSYCDRVAAAI 174 usage_00109.pdb 112 YSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAI 171 usage_00110.pdb 113 YSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAI 172 usage_00111.pdb 112 YSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAI 171 usage_00112.pdb 115 YIALGVPTNSTVRAVSIMKAAAVCFISNTASQRKVEVIEGDCSALASEVASYCDRVVAAV 174 usage_00113.pdb 115 YIALGVPTNSTVRAVSIMKAAAVCFISNTASQRKVEVIEGDCSALASEVASYCDRVVAAV 174 Y LGVP R IMKA F K GDC L E Y D usage_00014.pdb - usage_00015.pdb 174 D 174 usage_00022.pdb - usage_00023.pdb - usage_00024.pdb 171 S 171 usage_00025.pdb 174 S 174 usage_00062.pdb 174 R 174 usage_00063.pdb 174 R 174 usage_00077.pdb - usage_00078.pdb 174 S 174 usage_00079.pdb - usage_00080.pdb - usage_00087.pdb - usage_00088.pdb 175 A 175 usage_00089.pdb 175 A 175 usage_00090.pdb - usage_00101.pdb 175 S 175 usage_00102.pdb 175 S 175 usage_00103.pdb 175 S 175 usage_00104.pdb 175 S 175 usage_00105.pdb - usage_00106.pdb 175 S 175 usage_00109.pdb - usage_00110.pdb - usage_00111.pdb - usage_00112.pdb 175 S 175 usage_00113.pdb 175 S 175 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################