################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:08 2021 # Report_file: c_1291_163.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00002.pdb # 2: usage_00211.pdb # 3: usage_00632.pdb # 4: usage_00847.pdb # 5: usage_01565.pdb # 6: usage_01566.pdb # # Length: 35 # Identity: 2/ 35 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 35 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 35 ( 25.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -HVTVSRVLACLKRENILDKKKNK---IIV---YN 28 usage_00211.pdb 1 SRSSLREALRVLEALGTISTATGSGPRSGTIIT-A 34 usage_00632.pdb 1 -RVTVTRLLGDLRESKLIAIHKKR---ITV---F- 27 usage_00847.pdb 1 SRKYVLPLLEYLDQVKFTRRVGDK---RVV----- 27 usage_01565.pdb 1 SRETVGRILKMLEDQNLISAHGKT---IVV---Y- 28 usage_01566.pdb 1 SRETVGRILKMLEDQNLISAHGKT---IVV---Y- 28 r v L L v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################