################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:44 2021 # Report_file: c_0443_22.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00031.pdb # 2: usage_00037.pdb # 3: usage_00064.pdb # 4: usage_00155.pdb # 5: usage_00283.pdb # 6: usage_00394.pdb # 7: usage_00395.pdb # 8: usage_00396.pdb # 9: usage_00398.pdb # 10: usage_00399.pdb # 11: usage_00405.pdb # 12: usage_00412.pdb # # Length: 97 # Identity: 9/ 97 ( 9.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 97 ( 28.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 97 ( 37.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 ---RVLLPGDPGRAEWIAKTFL---QNPRRYND-------H-RGLWGYTGLYKGVP-VSV 45 usage_00037.pdb 1 --DVVLMPGDPLRAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00064.pdb 1 --DVVLMPGDPLRAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00155.pdb 1 DT---ILPGDPLRAKLIAETYL---ENVVQVTD-------V-RG-LGFTGEFKGRK-ISV 44 usage_00283.pdb 1 --ESILLPGDPLRAKYIAETFL---EDVTCYNN-------V-RGMLGFTGTYKGKR-VSV 46 usage_00394.pdb 1 --DVVLMPGDPLRAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00395.pdb 1 --DVVLMPGDPLRAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00396.pdb 1 --DVVLMPGDPLRAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00398.pdb 1 --DVVLMPGDPLAAKYIAETFL---EDAREVNN-------V-RGMLGFTGTYKGRK-ISV 46 usage_00399.pdb 1 --DTVLLPGDPLRAKFIAETYL---ENVECYNE-------V-RGMYGFTGTYKGKK-ISV 46 usage_00405.pdb 1 --DTVLLPGDPLRAKFIAETYL---ENVECYNE-------V-RGMYGFTGTYKGKK-ISV 46 usage_00412.pdb 1 --KFVCVGGSPNRMKAFALFMHKELGFEEAEE-DIKDICAGTDRYCMYKT-----GPVLA 52 pGdP rak iA t l rg g tg sv usage_00031.pdb 46 QTTGMGTPSAAIVVEELVRLGA----RVLVRVG---- 74 usage_00037.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIRVGSCG 79 usage_00064.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIRVGSCG 79 usage_00155.pdb 45 -G-HGGAPSASIYFHEL-TTYK----VKNFIRIG--- 71 usage_00283.pdb 47 QGTGMGVPSISIYVNELIQSYG----VKNLIRVG--- 76 usage_00394.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIRVG--- 76 usage_00395.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIRVG--- 76 usage_00396.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIR----- 74 usage_00398.pdb 47 MGHGMGIPSCSIYTKELITDFG----VKKIIRVG--- 76 usage_00399.pdb 47 QGTGMGVPSISIYVNELIQSYD----VQNLIR----- 74 usage_00405.pdb 47 QGTGMGVPSISIYVNELIQSYD----VQNLIRVG--- 76 usage_00412.pdb 53 ISHGMGIPSISIMLHELIKLLHHARCCDVTIIR---- 85 gmG PS sI EL i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################