################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:25 2021 # Report_file: c_0027_5.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # # Length: 223 # Identity: 154/223 ( 69.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 157/223 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/223 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 SAEALADKLVDRRRGGYCYEHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTV 60 usage_00014.pdb 1 SPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTL 60 usage_00015.pdb 1 SPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTL 60 usage_00016.pdb 1 SPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTL 60 usage_00017.pdb 1 SAEALADKLVDRR-RGGYYEHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTV 59 S ALADKLV RR gGyc EHNGL GYVLAELGYRVRR A RVVW PDAP P QTHT usage_00013.pdb 61 LAVTFPGCQGPYLVDVGFGGMTPTAPLRLETGTVQQTALEPYRLDDRGDGLVLQAMVRDE 120 usage_00014.pdb 61 LGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDT 120 usage_00015.pdb 61 LGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRV-GFVLQAMVRDT 119 usage_00016.pdb 61 LGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDT 120 usage_00017.pdb 60 LAVTFPGCQGPYLVDVGFGGMTPTAPLRLETGTVQQTALEPYRLDDRGDGLVLQAMVRDE 119 L VTFPG G YLVDVGFGG TPT PLRLETG VQ T EPYRL DR G VLQAMVRD usage_00013.pdb 121 WQALYEFSTLTRPQVDLRVGSWFVSTHPTSHFVTGLMAATVADDARWNLMGRNLAIHRRG 180 usage_00014.pdb 121 WQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAG 180 usage_00015.pdb 120 WQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAG 179 usage_00016.pdb 121 WQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAG 180 usage_00017.pdb 120 WQALYEFSTLTRPQVDLRVGSWFVSTHPTSHFVTGLMAATVADDARWNLMGRNLAIHRRG 179 WQ LYEF T TRPQ DL V SW STHP S FVTGL AA DDARWNL GR LA HR G usage_00013.pdb 181 GTEKILLEDAAAVVDTLGDRFGINVADVGERGRLEARIDKVCF 223 usage_00014.pdb 181 GTEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDE--- 220 usage_00015.pdb 180 GTEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDELL- 221 usage_00016.pdb 181 GTEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDE--- 220 usage_00017.pdb 180 GTEKILLEDAAAVVDTLGDRFGINVADVG-------------- 208 GTEKI L DAAAVVDTL RFGINVAD G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################