################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:55 2021 # Report_file: c_0131_6.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00014.pdb # 11: usage_00055.pdb # # Length: 181 # Identity: 44/181 ( 24.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 140/181 ( 77.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/181 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00006.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00007.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00008.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00009.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00010.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00011.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00012.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00013.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00014.pdb 1 RYLLMQLETPLDGILKAAQEAKTA---------KTNVILNPAPAREL------PDELLKC 45 usage_00055.pdb 1 RYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVM----KEVLDAYRELVPL 56 RYlLmqletplDgIlkaaqeaKta KtnvIlnPap pdELlkc usage_00005.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00006.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00007.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00008.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00009.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00010.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00011.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00012.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00013.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00014.pdb 46 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITL-G--S-KGVWLSQN-- 99 usage_00055.pdb 57 ADIVTPNYFEASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFRNPTHLRFLYSVKEG 116 vDliTPNetEAevLtGiTVyDdSSAqqAADalHckGieiVIItl g s kgvwlSqn usage_00005.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00006.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISV--- 151 usage_00007.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00008.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00009.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00010.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTRF 154 usage_00011.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00012.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTRF 154 usage_00013.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAA------- 147 usage_00014.pdb 100 ----GRGQRIPGFVVKATD-TTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTR- 153 usage_00055.pdb 117 SEAAVRRFSGVVPYHE--GRYTGTGDVFAACLLAFSH-SHPMDVAIGKSMAVLQELIIAT 173 gRgqripgfvvk d tTaaGDtFngaLvtgll emPlesAIkfahAaa usage_00005.pdb - usage_00006.pdb - usage_00007.pdb - usage_00008.pdb - usage_00009.pdb - usage_00010.pdb - usage_00011.pdb - usage_00012.pdb - usage_00013.pdb - usage_00014.pdb - usage_00055.pdb 174 R 174 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################