################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:26 2021 # Report_file: c_0270_48.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00162.pdb # 2: usage_00229.pdb # 3: usage_00373.pdb # # Length: 254 # Identity: 17/254 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 171/254 ( 67.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 83/254 ( 32.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00162.pdb 1 VKVLVEPLLNAVLEDYMNNVPDAR--------DAEVLNCMTTVVEKVGHMIPQGVILILQ 52 usage_00229.pdb 1 ------------------NP-TLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYY 41 usage_00373.pdb 1 -----NMAWDTIVEQSTANP-TLL----TVKIIANIIKTNVAVCTSMGADFYPQLGHIYY 50 Np tll iAniiktnvaVctsmGadfypqlghIyy usage_00162.pdb 53 SVFECTLDMINKDFTE---------------------YPEHRVEFYKLLKVINEKS--FA 89 usage_00229.pdb 42 NMLQLYRAVSS-----MISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLD 96 usage_00373.pdb 51 NMLQLYRAVSS-----MISAQ----------TPKVRGLRTIKKEILKLVETYISKARNLD 95 nmlqlyravss lrtikkEilKLvetyisKa ld usage_00162.pdb 90 AFLELPPAAFKLFVDAICWAF-KHNNRDV-EVNGLQIALDLVKNIE-RMGNVPFANEFHK 146 usage_00229.pdb 97 DV--V-KVLVEPLLNAVLEDYMNNVP-DARDAEVLNCMTTVVEKVGHM------IPQGVI 146 usage_00373.pdb 96 DV--V-KVLVEPLLNAVLEDYMNNVP-DARDAEVLNCMTTVVEKVGHM------IPQGVI 145 dv v kvlvepllnAvledy nnvp Da daevLncmttvVekvg m ipqgvi usage_00162.pdb 147 NYFFIFVSETFFVLT-DS-DHKSGFSKQALLLMKLISLV---YDNKISVPLYQGTSNQVY 201 usage_00229.pdb 147 LILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLE-LPP------AAFKL 199 usage_00373.pdb 146 LILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLE-LPP------AAFKL 198 lilqsvfecTldmin Df eypehrvefykLLkvineks fle lpp aafkl usage_00162.pdb 202 LSQYLANMLSNAFP 215 usage_00229.pdb 200 FVDAICWAFKH--- 210 usage_00373.pdb 199 FVDAICWAFKH--- 209 fvdaicwafkh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################