################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:02 2021 # Report_file: c_0461_85.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00290.pdb # 2: usage_00494.pdb # 3: usage_00495.pdb # 4: usage_00496.pdb # 5: usage_00497.pdb # 6: usage_00533.pdb # 7: usage_00534.pdb # 8: usage_00536.pdb # 9: usage_00567.pdb # 10: usage_00568.pdb # 11: usage_00569.pdb # 12: usage_00570.pdb # 13: usage_00804.pdb # # Length: 82 # Identity: 21/ 82 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/ 82 ( 46.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 82 ( 6.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00290.pdb 1 ---VVKADTLGSLEAVVKILRD-YVPIKVADIGDVSRRDVVNAGIALQEDRVYGAIIAFN 56 usage_00494.pdb 1 --VVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 58 usage_00495.pdb 1 --VVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 58 usage_00496.pdb 1 --VVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 58 usage_00497.pdb 1 KGVVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 60 usage_00533.pdb 1 --VSVQASTLGSLEALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFD 58 usage_00534.pdb 1 --VSVQASTLGSLEALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFD 58 usage_00536.pdb 1 ---VVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 57 usage_00567.pdb 1 --VVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 58 usage_00568.pdb 1 --VVVQASTLGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFD 58 usage_00569.pdb 1 --VSVQASTLGSLEALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFD 58 usage_00570.pdb 1 --VSVQASTLGSLEALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFD 58 usage_00804.pdb 1 --VVVKADTLGTLEALVEALRRRGVPVRLADIGPVSRSDVLDAAVTRKIDPYLGVVLAFN 58 V A TLGsLEAl L d Pv GpV rDV l p y v l F usage_00290.pdb 57 VKVIPSAAQELKNSDIKLFQG- 77 usage_00494.pdb 59 VKVDKEAEQYAEQEGIKIFNAD 80 usage_00495.pdb 59 VKVDKEAEQYAEQEGIKIFNAD 80 usage_00496.pdb 59 VKVDKEAEQYAEQEGIKIFNA- 79 usage_00497.pdb 61 VKVDKEAEQYAEQEGIKIFNA- 81 usage_00533.pdb 59 VKVDKEAQQYADENGIKIFTA- 79 usage_00534.pdb 59 VKVDKEAQQYADENGIKIFTA- 79 usage_00536.pdb 58 VKVDKEAEQYAEQEGIKIFNA- 78 usage_00567.pdb 59 VKVDKEAEQYAEQEGIKIFNAD 80 usage_00568.pdb 59 VKVDKEAEQYAEQEGIKIFNA- 79 usage_00569.pdb 59 VKVDKEAQQYADENGIKIFTAD 80 usage_00570.pdb 59 VKVDKEAQQYADENGIKIFTA- 79 usage_00804.pdb 59 VKVLPEAEEEASRAGVKIFRE- 79 VKV eA q a giKiF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################