################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:54 2021 # Report_file: c_0271_24.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00188.pdb # 2: usage_00232.pdb # 3: usage_00257.pdb # 4: usage_00268.pdb # 5: usage_00270.pdb # 6: usage_00281.pdb # # Length: 209 # Identity: 5/209 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/209 ( 16.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/209 ( 29.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAV 60 usage_00232.pdb 1 ---------------AVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAV 45 usage_00257.pdb 1 IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAV 60 usage_00268.pdb 1 ---------------GNITRGLAVGLALINYGRQE--LADDLITKMLASDESLLRYGGAF 43 usage_00270.pdb 1 ---------------AVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAV 45 usage_00281.pdb 1 -----LIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVE 55 l G ai d rg a usage_00188.pdb 61 GLALINYGR--QELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLH-VAV 117 usage_00232.pdb 46 GIALVMYGR--MEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLH-VAV 102 usage_00257.pdb 61 GLALINYGR--QELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLH-VAV 117 usage_00268.pdb 44 TIALAYAGTGNNSAVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDYT-TVPRIV-QL-LS 100 usage_00270.pdb 46 GIALVMYGR--MEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLH-VAV 102 usage_00281.pdb 56 SLGFILFRT--PEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEP-MT- 111 al g e l R g gn a l usage_00188.pdb 118 SDSNDDVRRAAVIALGFVLLRD--------YTTVPRIVQLLS-KS--HNAHVRCGTAFAL 166 usage_00232.pdb 103 SDVNDDVRRAAVESLGFILFRT--------PEQCPSVVSLLS-ES--YNPHVRYGAAMAL 151 usage_00257.pdb 118 SDSNDDVRRAAVIALGFVLLRD--------YTTVPRIVQLLS-KS--HNAHVRCGTAFAL 166 usage_00268.pdb 101 KSHNAHVRCGTAFALGIACAGKG-------LQSAIDVLDPLT-KD--PVDFVRQAAMIAL 150 usage_00270.pdb 103 SDVNDDVRRAAVESLGFILFRT--------PEQCPSVVSLLS-ES--YNPHVRYGAAMAL 151 usage_00281.pdb 112 NDPVNYVRQGALIASALIMIQQ-TEITCPKVNQFRQLYSKVIND-KHDDVMAKFGAILAQ 169 d n VR a lg l vr g Al usage_00188.pdb 167 GIAC------------------------- 170 usage_00232.pdb 152 GICCAGTGN------KEAINLLEPMTND- 173 usage_00257.pdb 167 GIAC------------------------- 170 usage_00268.pdb 151 SMILIQQTEKLNPQVADINKNFLSVITN- 178 usage_00270.pdb 152 GICCAGTGN------KEAINLLEPMTND- 173 usage_00281.pdb 170 GILD------------------------A 174 gi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################