################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:06 2021 # Report_file: c_1054_58.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00016.pdb # 5: usage_00093.pdb # 6: usage_00124.pdb # 7: usage_00190.pdb # 8: usage_00191.pdb # 9: usage_00192.pdb # 10: usage_00193.pdb # 11: usage_00390.pdb # 12: usage_00391.pdb # 13: usage_00392.pdb # 14: usage_00393.pdb # 15: usage_00394.pdb # 16: usage_00528.pdb # 17: usage_00607.pdb # 18: usage_00610.pdb # # Length: 70 # Identity: 3/ 70 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 70 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 70 ( 44.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00013.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00014.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00016.pdb 1 SRNAAEYLLSS--------GINGSFLVRESESSPGQRSISLRYE---------GRVYHYR 43 usage_00093.pdb 1 TRHQAEMALN-ER------GHEGDFLIRDSESSPNDFSVSLKAQ---------GKNKHFK 44 usage_00124.pdb 1 -RHIAERLLTEYCIETG--APDGSFLVRESETFVGDYTLSFWRN---------GKVQHCR 48 usage_00190.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00191.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00192.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00193.pdb 1 SRVKAAQLVL-AG----GPRSHGLFVIRQSETRPGECVLTFNFQ---------GKAKHLR 46 usage_00390.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00391.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00392.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00393.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00394.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 usage_00528.pdb 1 SGGQAETLLQ-AK------GEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIK 53 usage_00607.pdb 1 -RNKAENLLR-GK------RDGTFLVRE-S-SKQGCYACSVVVD---------GEVKHCV 41 usage_00610.pdb 1 PRAKAEEMLS-KQ------RHDGAFLIRESESAPGDFSLSVKFG---------NDVQHFK 44 r Ae l f r S g s H usage_00012.pdb 45 VLRD-G---- 49 usage_00013.pdb 45 VLRD-G---- 49 usage_00014.pdb 45 VLRD-G---- 49 usage_00016.pdb ---------- usage_00093.pdb 45 VQLKETVYCI 54 usage_00124.pdb ---------- usage_00190.pdb 45 VLRD-G---- 49 usage_00191.pdb 45 VLRD-G---- 49 usage_00192.pdb ---------- usage_00193.pdb ---------- usage_00390.pdb 45 VLRD------ 48 usage_00391.pdb 45 VLRD------ 48 usage_00392.pdb 45 VLRD------ 48 usage_00393.pdb 45 VLRD------ 48 usage_00394.pdb 45 VLRD------ 48 usage_00528.pdb 54 VMCE-G---- 58 usage_00607.pdb 42 INKT------ 45 usage_00610.pdb 45 VLRD-G---- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################