################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:15 2021 # Report_file: c_0717_18.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00029.pdb # 2: usage_00071.pdb # 3: usage_00072.pdb # 4: usage_00078.pdb # 5: usage_00124.pdb # 6: usage_00125.pdb # 7: usage_00129.pdb # 8: usage_00433.pdb # 9: usage_00434.pdb # # Length: 71 # Identity: 8/ 71 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 71 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 71 ( 18.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 NLHYITYVEENGGIFELDGRNLSGPLYLGKSDPTATDLIEQELVRVRVASYMENANEEDV 60 usage_00071.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00072.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00078.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00124.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00125.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00129.pdb 1 --HFIVFVQIEGKIIELDGRKDHPT-VHCFTNGDNF----LYDTGKIIQDKFIEKC--KD 51 usage_00433.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 usage_00434.pdb 1 NFHFILFNNVDGHLYELDGRMPFPV-NHGASSEDTL----LKDAAKVCREFTEREQ--GE 53 HfI f G ELDGR p hg s d l d k e usage_00029.pdb 61 LNFAMLG---- 67 usage_00071.pdb 54 VRFSAVA---- 60 usage_00072.pdb 54 VRFSAVA---- 60 usage_00078.pdb 54 VRFSAVA---- 60 usage_00124.pdb 54 VRFSAVA---- 60 usage_00125.pdb 54 VRFSAVA---- 60 usage_00129.pdb 52 DLRFSALAVIP 62 usage_00433.pdb 54 VRFSAVA---- 60 usage_00434.pdb 54 VRFSAVA---- 60 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################