################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:51 2021 # Report_file: c_0098_7.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00057.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # # Length: 185 # Identity: 53/185 ( 28.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/185 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/185 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --V--FAGTPQFAVPTLRALIDSSHRVLAVYTQP----------DESPVKEIARQNEIPI 46 usage_00057.pdb 1 RIV--FAGTPDFAARHLAALLSSEHEIIAVYTQP-E--------TASPVKTLALEHNVPV 49 usage_00065.pdb 1 ---KVVFGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPV 57 usage_00066.pdb 1 ---KVVFGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPV 57 GTPdF vp Lr Li vi V TQP t PVK A h iPv usage_00007.pdb 47 IQPFSLRDEVEQEKLIAN-AD-VVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGAAP 104 usage_00057.pdb 50 YQPENFKSDESKQQLAALNAD-LVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAP 108 usage_00065.pdb 58 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 117 usage_00066.pdb 58 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 117 QP r e ek Al D V A G i P L apk GCiNVHaSlLP RG AP usage_00007.pdb 105 IQRAILAGDRETGISIQNEGLDTGDVLAKSACVISSEDTAADLHDRLSLIGADLLLESLA 164 usage_00057.pdb 109 IQRSIWAGDSETGVTIQDVGLDTGD-LKIATLPIEASDTSAS-YDKLAELGPQALLECLQ 166 usage_00065.pdb 118 IHYAI-EGKEKTGITIYVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVP 176 usage_00066.pdb 118 IHYAI-EGKEKTGITIYVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT-- 174 I aI G TGitI e LD GD L Ie T s DkLse Ga lL usage_00007.pdb 165 KLEKG 169 usage_00057.pdb 167 DIAQG 171 usage_00065.pdb 177 LLIQG 181 usage_00066.pdb ----- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################