################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:36 2021 # Report_file: c_0085_7.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00028.pdb # 4: usage_00032.pdb # 5: usage_00043.pdb # 6: usage_00096.pdb # 7: usage_00097.pdb # 8: usage_00100.pdb # 9: usage_00104.pdb # 10: usage_00123.pdb # 11: usage_00124.pdb # # Length: 107 # Identity: 39/107 ( 36.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/107 ( 56.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/107 ( 4.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -YELTQPPSVSVSPGQTVNITCSGDTLGDKYVCWYQQKPGQSPVLVIYQDTKRPSGIPER 59 usage_00025.pdb 1 -YELTQPPSVSVSPGQTVNITCSGDTLGDKYVCWYQQKPGQSPVLVIYQDTKRPSGIPER 59 usage_00028.pdb 1 -YELTQPPSVSVSPGQTVNITCSGDTLGDKYVCWYQQKPGQSPVLVIYQDTKRPSGIPER 59 usage_00032.pdb 1 -YELTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPER 59 usage_00043.pdb 1 SYELKQPPSVSVSPGQTARITCSGDVLPKKYAYWYQERSGQAPVLVVYEDSGRPSEIPER 60 usage_00096.pdb 1 --VLTQPPSVSVAPGQTARISCSGDNLGDKYANWYQQKPGQAPVLVIYDDIDRPSGIPER 58 usage_00097.pdb 1 --VLTQPPSVSVAPGQTARISCSGDNLGDKYANWYQQKPGQAPVLVIYDDIDRPSGIPER 58 usage_00100.pdb 1 -YTLTQPPLVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDH 59 usage_00104.pdb 1 -IELTQPPSVSVAPGQTARISCSGDSLGSKYVIWYQQKPGQAPVLVIYDDSNRPSGIPER 59 usage_00123.pdb 1 -SVLTQPPSVSVSPGQTASITCSGDNLRDGYASWYQQKPGQSPVLVIYRDDKRPSGIPER 59 usage_00124.pdb 1 --ELTQPPSVSVSPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQR 58 LtQPPsVSV pGqt I Csg l y WYQqk Gq PVlV Y D RPSgIP r usage_00024.pdb 60 FSGSNSGDTATLTVSGTQAMDEADYYCQAWDSSSFVFGTG--TKVTV 104 usage_00025.pdb 60 FSGSNSGDTATLTVSGTQAMDEADYYCQAWDSSSFVFGTG--TKVT- 103 usage_00028.pdb 60 FSGSNSGDTATLTVSGTQAMDEADYYCQAWDSSSFVFGTG--TKVTV 104 usage_00032.pdb 60 FSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDYVFGTGTKVTV- 105 usage_00043.pdb 61 FSGSSSGTKATLTISGAQVEDEADYYCYSDISNGYPLFGGGTKLSV- 106 usage_00096.pdb 59 FSGSNSGNTATLTISGTQAEDEADYYCGSYDFFLGMIVFGGGTKLTV 105 usage_00097.pdb 59 FSGSNSGNTATLTISGTQAEDEADYYCGSYDFFLGMIVFGGGTKLTV 105 usage_00100.pdb 60 FSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTV 106 usage_00104.pdb 60 FSGSNSGNTATLTISGTQAEDEADYYCSTFTMSGNGTVFGGGTKLTV 106 usage_00123.pdb 60 FSGSSSGNTAILTLSGAQAMDEADYYCQAWASTTVIFGGG--TRLTV 104 usage_00124.pdb 59 FSSSTSGTTVTLTISGVQAEDEADYYCQAWDNSASIFGGG--TKLTV 103 FSgS SG atLT S qa DEADYYC g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################