################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:21 2021 # Report_file: c_0024_5.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00101.pdb # 6: usage_00102.pdb # 7: usage_00103.pdb # 8: usage_00104.pdb # 9: usage_00407.pdb # 10: usage_00408.pdb # # Length: 250 # Identity: 122/250 ( 48.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 122/250 ( 48.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/250 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00005.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00006.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00007.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00101.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00102.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00103.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00104.pdb 1 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA---EYDIDAAWQCIEYYAGLAP 57 usage_00407.pdb 1 SPMARGRILKRAADIMRERNDALSTLETLDTGKPIQ--ETIVADPTSGADAFEFFGGIAP 58 usage_00408.pdb 1 SPMARGRILKRAADIMRERNDALSTLETLDTGKPIQ--ETIVADPTSGADAFEFFGGIAP 58 R R AA I RER D LE GK I D E G AP usage_00004.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00005.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00006.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00007.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00101.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00102.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00103.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00104.pdb 58 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 117 usage_00407.pdb 59 SALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT 118 usage_00408.pdb 59 SALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT 118 GG FAYT R PLGVC GI AWNYP IA WK APAL GNA VFKPS T usage_00004.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00005.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00006.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00007.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00101.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00102.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00103.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00104.pdb 118 PVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 177 usage_00407.pdb 119 PLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA 178 usage_00408.pdb 119 PLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA 178 P AEI EAG P GL NV QG TG LL HP VAKVS TGSVPTG KV A usage_00004.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00005.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00006.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00007.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00101.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00102.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00103.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00104.pdb 178 KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 237 usage_00407.pdb 179 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK---- 234 usage_00408.pdb 179 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 238 KHVT ELGGKSP F D E AV GA NF GQVC NGTRVFVQ usage_00004.pdb 238 EEVVKRTKAI 247 usage_00005.pdb 238 EEVVKRTKAI 247 usage_00006.pdb 238 EEVVKRTKAI 247 usage_00007.pdb 238 EEVVKRTKAI 247 usage_00101.pdb 238 EEVVKRTKAI 247 usage_00102.pdb 238 EEVVKRTKAI 247 usage_00103.pdb 238 EEVVKRTKAI 247 usage_00104.pdb 238 EEVVKRTKAI 247 usage_00407.pdb ---------- usage_00408.pdb 239 ENLKRRTEAM 248 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################