################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:35 2021 # Report_file: c_0404_21.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00217.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00249.pdb # 5: usage_00329.pdb # # Length: 91 # Identity: 19/ 91 ( 20.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 91 ( 33.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 91 ( 18.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 ASVKMSCTASGYSFSSYNIHWVKQTPGQGLEWIGVIYPGNGDTSYNQKFRDKATLTADKS 60 usage_00218.pdb 1 ASVKMSCTASGYSFSSYNIHWVKQTPGQGLEWIGVIYPGNGDTSYNQKFRDKATLTADKS 60 usage_00219.pdb 1 ASVKMSC-------SSYNIHWVKQTPGQGLEWIGVIYPGNGDTSYNQKFRDKATLTADKS 53 usage_00249.pdb 1 --VACAASGD-T-FSGYLAAWFRQAPGKGREGVAAINSKRHTTSYADSVKGRFTISKDNA 56 usage_00329.pdb 1 ESLKLSCAA-----SGGFMGWYRQAPGKQRELVATINS-RGITNYADFVKGRFTISRDNA 54 vk sc S y W Q PG g E I g TsY T D usage_00217.pdb 61 SSTAYMQLSSLTSEDSAVYHCARG------- 84 usage_00218.pdb 61 SSTAYMQLSSLTSEDSAVYHCARG------- 84 usage_00219.pdb 54 SSTAYMQLSSLTSEDSAVYHCARG------- 77 usage_00249.pdb 57 DNIMYLEMNSLKPEDTAIYYCAAAD------ 81 usage_00329.pdb 55 KKTVYLEMNSLEPEDTAVYYCYTHYFRSYWG 85 t Y SL ED AvY Ca #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################