################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:02:05 2021 # Report_file: c_1012_8.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00049.pdb # 2: usage_00092.pdb # 3: usage_00137.pdb # 4: usage_00169.pdb # 5: usage_00250.pdb # 6: usage_00251.pdb # 7: usage_00252.pdb # 8: usage_00253.pdb # 9: usage_00307.pdb # 10: usage_00352.pdb # 11: usage_00391.pdb # 12: usage_00393.pdb # 13: usage_00433.pdb # 14: usage_00434.pdb # 15: usage_00450.pdb # 16: usage_00478.pdb # 17: usage_00537.pdb # 18: usage_00564.pdb # 19: usage_00581.pdb # 20: usage_00587.pdb # 21: usage_00588.pdb # 22: usage_00589.pdb # 23: usage_00614.pdb # 24: usage_00615.pdb # # Length: 64 # Identity: 5/ 64 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 64 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 64 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00092.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00137.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00169.pdb 1 KSSLFKVILLGDGG-VGKSSLMNRYVTNKFD--LFHT-IGVE-FLNKDLEVDGHFVTMQI 55 usage_00250.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 55 usage_00251.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00252.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00253.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00307.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKS----VE-FATRSIQVDGKTIKAQI 52 usage_00352.pdb 1 -----SVGFVGFPSV-GKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYK----GAKIQM 50 usage_00391.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 55 usage_00393.pdb 1 -DFLFKFLVIGNAG-TGKSCLLHQFIEKKFKDDSNHT-IGVE-FGSKIINVGGKYVKLQI 56 usage_00433.pdb 1 -DYLFKIVLIGDSG-VGKSNLLSRFTRDEFNL-------GVE-FATKSIQL--KIIKAQI 48 usage_00434.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLES-----GVE-FATRSIQVDGKTIKAQI 51 usage_00450.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00478.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00537.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 55 usage_00564.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00581.pdb 1 --YLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 55 usage_00587.pdb 1 -AYSFKVVLLGEGC-VGKTSLVLRYCENKFNDKHITT-LQAS-FLTKKLNIGGKRVNLAI 56 usage_00588.pdb 1 -AYSFKVVLLGEGC-VGKTSLVLRYCENKFNDKHITT-LQAS-FLTKKLNIGGKRVNLAI 56 usage_00589.pdb 1 -AYLFKYIIIGDTG-VGKSCLLLQFTDKRF----DLT-IGVE-FGARMITIDGKQIKLQI 52 usage_00614.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 usage_00615.pdb 1 -DYLFKVVLIGDSG-VGKSNLLSRFTRNEFNLESKST-IGVE-FATRSIQVDGKTIKAQI 56 k G GK L f f i usage_00049.pdb 57 WDTA 60 usage_00092.pdb 57 WDTA 60 usage_00137.pdb 57 WDTA 60 usage_00169.pdb 56 WDT- 58 usage_00250.pdb 56 WDTA 59 usage_00251.pdb 57 WDTA 60 usage_00252.pdb 57 WDTA 60 usage_00253.pdb 57 WDTA 60 usage_00307.pdb 53 WDTA 56 usage_00352.pdb 51 LDLP 54 usage_00391.pdb 56 WDTA 59 usage_00393.pdb 57 WDTA 60 usage_00433.pdb 49 WDT- 51 usage_00434.pdb 52 WDTA 55 usage_00450.pdb 57 WDTA 60 usage_00478.pdb 57 WDTA 60 usage_00537.pdb 56 WDTA 59 usage_00564.pdb 57 WDTA 60 usage_00581.pdb 56 WDTA 59 usage_00587.pdb 57 WDT- 59 usage_00588.pdb 57 WD-- 58 usage_00589.pdb 53 WDT- 55 usage_00614.pdb 57 WDTA 60 usage_00615.pdb 57 WDTA 60 wD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################