################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:24 2021 # Report_file: c_0545_107.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00068.pdb # 2: usage_00069.pdb # 3: usage_00127.pdb # 4: usage_00297.pdb # 5: usage_00653.pdb # # Length: 188 # Identity: 30/188 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/188 ( 26.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/188 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00068.pdb 1 -VTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNAL-ENVDAFDKWAFKKNIRGEVEYA 58 usage_00069.pdb 1 --TDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNAL-ENVDAFDKWAFKKNIRGEVEYA 57 usage_00127.pdb 1 DVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAV-ASLDH--------PLSEEVSHA 51 usage_00297.pdb 1 -VLGLLNLYEASHVRTHADDILEDALAFSTIHLESAA-PHLKS--------PLREQVTHA 50 usage_00653.pdb 1 ----ILSLYEASFLALEGENILDEARVFAISHLKELSEEKIGK--------ELAEQVNHA 48 L S ge I eA L a V A usage_00068.pdb 59 LKYPWHKSMPRLEARSYIE-NYG--P-DDVWLGKTVYMMPYISNEKYLELAKLDFNKVQS 114 usage_00069.pdb 58 LKYPWHKSMPRLEARSYIE-NYG--P-DDVWLGKTVYMMPYISNEKYLELAKLDFNKVQS 113 usage_00127.pdb 52 LKQSIRRGLPRVEARHYLS-VYQD-ES---------------HNKALLEFAKIDFNMLQF 94 usage_00297.pdb 51 LEQCLHKGVPRVETRFFISSIYDKEQS---------------KNNVLLRFAKLDFNLLQM 95 usage_00653.pdb 49 LELPLHRRTQRLEAVWSIE-AYRKKED---------------ANQVLLELAILDYNMIQS 92 L h pR Ear i Y N Le AklDfN Q usage_00068.pdb 115 IHQTELQDLRRWWKSSGFTD-LNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTV 173 usage_00069.pdb 114 IHQTELQDLRRWWKSSGFTD-LNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTV 172 usage_00127.pdb 95 LHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKM--------- 145 usage_00297.pdb 96 LHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFSALGVYFEPQYSQARVMLVKTISMIS 155 usage_00653.pdb 93 VYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVT 152 h eL RWWk f L R Rv E yf FEP S R usage_00068.pdb 174 ILDDLYDA 181 usage_00069.pdb 173 ILDDLYD- 179 usage_00127.pdb -------- usage_00297.pdb 156 IVDDTFD- 162 usage_00653.pdb 153 IIDDIYD- 159 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################