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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:14:11 2021
# Report_file: c_0109_21.html
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#====================================
# Aligned_structures: 5
#   1: usage_00005.pdb
#   2: usage_00038.pdb
#   3: usage_00066.pdb
#   4: usage_00067.pdb
#   5: usage_00154.pdb
#
# Length:        233
# Identity:       41/233 ( 17.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     69/233 ( 29.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           49/233 ( 21.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  PAGDQDTFHAWSNALLGD--WQ---QVVEKEAATVSLVNYFGELIAVKRENPADDLISEL   55
usage_00038.pdb         1  ----RHSMHTWTQLILSSSHG-AEV----SERAKNEMNAYFSDLIGLRSDSAGEDVTSLL   51
usage_00066.pdb         1  ----VARFRGWADTMVSL----TGYSMEDWTAARDALESYLDGLVAAKRENPGSDLLSAL   52
usage_00067.pdb         1  ----VARFRGWADTMVSL----TGYSMEDWTAARDALESYLDGLVAAKRENPGSDLLSAL   52
usage_00154.pdb         1  -----DRFTRWSGAFLS---T-AEVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSAL   51
                                  f  W     s               A      Y   L    r  p  Dl S L

usage_00005.pdb        56  IAISDGD----S-------TLTEREIIAL-SIGILSAGHETTANQISMFLVTLLHNPEEL  103
usage_00038.pdb        52  GAAVGR-----DEITLSEA-------VGLA-VLLQIG-GEAVTNNSGQMFHLLLSRPELA   97
usage_00066.pdb        53  VATAAED----N-------ELTDHDVRSL-SLILLLAGYEPASNQLGSSVLTLLRFPDRL  100
usage_00067.pdb        53  VATAAED----N-------ELTDHDVRSL-SLILLLAGYEPASNQLGSSVLTLLRFPDRL  100
usage_00154.pdb        52  VQA----RDQQD-------SLSEQELLDL-AIGLLVAGYESTTTQIADFVYLLMTRPELR   99
                            a                          L    ll a  E   nq       Ll  P   

usage_00005.pdb       104  DKLRDNREAIPKAVDELLRFVPLTTTGGIIPRLTTAEVELSGGQVLPAGAVVLPAVATAN  163
usage_00038.pdb        98  ERLRSEPEIRPRAIDELLRWIPHRN-AVGLSRIALEDVEIK-GVRIRAGDAVYVSYLAAN  155
usage_00066.pdb       101  AELRRDPGLLPSAVEELMRYAPAGD--GALFRVTLEDVTIG-DTHIPANSAVLASTQAAN  157
usage_00067.pdb       101  AELRRDPGLLPSAVEELMRYAPAGD--GALFRVTLEDVTIG-DTHIPANSAVLASTQAAN  157
usage_00154.pdb       100  RQLLDRPELIPSAVEELTRWVPLGV-GTAFPRYAVEDVTLR-GVTIRAGEPVLASTGAAN  157
                             Lr  p   P Av EL R  P         R   edV       i A   Vl s  aAN

usage_00005.pdb       164  RDPEVFEDGERLNVTRENNPHLAFGAGIHHCLGAQLARIELQEALGAILDRMP  216
usage_00038.pdb       156  RDPEVFPDPDRIDFER--NPHVSFGFGPHYCPGGMLARLESELLVDAVLDR--  204
usage_00066.pdb       158  WDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRF-  209
usage_00067.pdb       158  WDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRR--  208
usage_00154.pdb       158  RDQAQFPDADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR--  208
                            Dp  F D       R  N H   G G H ClGa LAR Elq a  a L R  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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