################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:53 2021 # Report_file: c_0031_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00043.pdb # 3: usage_00044.pdb # 4: usage_00045.pdb # 5: usage_00047.pdb # 6: usage_00048.pdb # 7: usage_00049.pdb # 8: usage_00085.pdb # 9: usage_00094.pdb # 10: usage_00103.pdb # 11: usage_00145.pdb # 12: usage_00162.pdb # 13: usage_00163.pdb # 14: usage_00164.pdb # 15: usage_00165.pdb # 16: usage_00190.pdb # # Length: 245 # Identity: 4/245 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/245 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 85/245 ( 34.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -TTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQ-V 57 usage_00043.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQ-V 58 usage_00044.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQ-V 58 usage_00045.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIAT-YKYNIILSNSDQNQDKELHLLNN-LGKQ-V 56 usage_00047.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIAT-YKYNIILSNSDQNQDKELHLLNN-LGKQ-V 56 usage_00048.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIAT-YKYNIILSNSDQNQDKELHLLNN-LGKQ-V 56 usage_00049.pdb 1 TTTVGVIIPDISNI-FYAELARGIEDIAT-YKYNIILSNSDQNQDKELHLLNN-LGKQ-V 56 usage_00085.pdb 1 ---IGLVLGYD-----YIRLISGLGSALEERDYSLLVR-S--DDDDEVSILEDWIATGNV 49 usage_00094.pdb 1 -NLVAVIIPSLSN--VFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYE-LSWR-P 55 usage_00103.pdb 1 ---LGLVVTN-TLYHYFSELLFHAAR-AEEKGRQLLLADGKHSAEEERQAIQYLLDLR-C 54 usage_00145.pdb 1 ---VGLLLPSLNNL-HFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRR-P 55 usage_00162.pdb 1 ---IAVIVANIDDY-FSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRG-F 55 usage_00163.pdb 1 -TTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQ-V 57 usage_00164.pdb 1 TTTVGVILPTITST-YFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQ-V 58 usage_00165.pdb 1 -TTVGVILPTITST-YFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQ-V 57 usage_00190.pdb 1 -TTVGVIIPDISSI-FYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQ-V 57 E usage_00001.pdb 58 DGIIFMSGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 110 usage_00043.pdb 59 DGIIFMSGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 111 usage_00044.pdb 59 DGIIFMSGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 111 usage_00045.pdb 57 DGIIF-SGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 108 usage_00047.pdb 57 DGIIF-SGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 108 usage_00048.pdb 57 DGIIF-SGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 108 usage_00049.pdb 57 DGIIF-SGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 108 usage_00085.pdb 50 DALLLLN--LEIG--DPRIELK-NNPQPCLALAD--SSLTS-GLPTL-SDDAAASGT-IR 99 usage_00094.pdb 56 SGVIIAGLEH----SEAARA-LDAAGIPVVEIDSDGKPVD-----AVGISHRRAGRE-AQ 104 usage_00103.pdb 55 DAII-YPRFL---SVDEIDDIIDAHSQPI-VLNR--RLRKNSS-HSVWCDHKQTSFNAVA 106 usage_00145.pdb 56 EAMVLSYDGH----TEQTIRLLQRASIPIVEIWE--KPAHP-IGHTVGFSNERAAYDMTN 108 usage_00162.pdb 56 DGLILQS-FS---NPQTVQEIL-HQQMPVVSVDR--EMDAC-PWPQVVTDNFEAAKAATT 107 usage_00163.pdb 58 DGIIFMSGNV----TEEHVEELKKSPVPVVLAAS--IESTN-QIPSVTIDYEQAAFDAVQ 110 usage_00164.pdb 59 DGIVYMGSSL----DEKIRTSLKNSRTPVVLVGT--IDGDK-EIPSVNIDYHLAAYQSTK 111 usage_00165.pdb 58 DGIVYMGSSL----DEKIRTSLKNSRTPVVLVGT--IDGDK-EIPSVNIDYHLAAYQSTK 110 usage_00190.pdb 58 DGIVFMGGNI----TDEHVAEFKRSPVPIVLAAS--VEEQE-ETPSVAIDYEQAIYDAVK 110 P v a usage_00001.pdb 111 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 161 usage_00043.pdb 112 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 162 usage_00044.pdb 112 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 162 usage_00045.pdb 109 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 159 usage_00047.pdb 109 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 159 usage_00048.pdb 109 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 159 usage_00049.pdb 109 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 159 usage_00085.pdb 100 HLALFGHKNIARVAGPEE--L--GHSYIRDAAFSEITTELGRY--------R-LHTD--Y 144 usage_00094.pdb 105 AILKAGYRRIGF-GTKPL--D--YRARKRFEGFTEVLGKNGVEIED---R-EFYSGG--S 153 usage_00103.pdb 107 ELINAGHQEIAFLTGS-D---S-PTSIERLAGYKDALAQHGIALNEK--L-I-ANGK--W 155 usage_00145.pdb 109 ALLARGFRKIVFLGEK-DDDW--TRGAARRAGFKRAMREAGLNPD----QEI-RLGAPPL 160 usage_00162.pdb 108 AFRQQGYQHVVVLTSELE--LS-RTRQERYRGILAAAQ---------DVD-V-LEVS--E 151 usage_00163.pdb 111 SLIDSGHKNIAFVSGTLE--EPI-NHAKKVKGYKRALTESGLPVRDS--Y-I-VEGD--Y 161 usage_00164.pdb 112 KLIDSGNKKIAYIMGSLK--D--VENTERMVGYQEALLEANIEFDEN--L-V-FEGN--Y 161 usage_00165.pdb 111 KLIDSGNKKIAYIMGSLK--D--VENTERMVGYQEALLEANIEFDEN--L-V-FEGN--Y 160 usage_00190.pdb 111 LLVDKGHTDIAFVSGPMA--EPI-NRSKKLQGYKRALEEANLPFNEQ--F-V-AEGD--Y 161 G i g usage_00001.pdb 162 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDEMALGVIHGAQDRGLNVPNDLE 210 usage_00043.pdb 163 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDEMALGVIHGAQDRGLNVPNDLE 211 usage_00044.pdb 163 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDEMALGVIHGAQDRGLNVPNDLE 211 usage_00045.pdb 160 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDE-ALGVIHGAQDRGLNVPNDLE 207 usage_00047.pdb 160 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDE-ALGVIHGAQDRGLNVPNDLE 207 usage_00048.pdb 160 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDE-ALGVIHGAQDRGLNVPNDLE 207 usage_00049.pdb 160 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDE-ALGVIHGAQDRGLNVPNDLE 207 usage_00085.pdb 145 -------TPESGAEATKR---LLSVEPRP-TAIIYDNDV-ALAGESVASVKGVRVPEDLS 192 usage_00094.pdb 154 -------ALAKGRE-TQA---LERSP-DL-DFLYYSNDI-AAGGLLYLLEQGIDIPGQIG 199 usage_00103.pdb 156 -------TPASGAEGVELLER------KF-SALVASNDD-AIG-AKALHERGVAVPEQVS 199 usage_00145.pdb 161 -------SIEDGVAAAEL---ILQEYPDT-DCIFCVSDMPAFGLLSRLKSIGVAVPEQVS 209 usage_00162.pdb 152 SSYNHSEVHQRLTQLITQ---ND---Q--KTVAFALKERWLLEFFPNLIISGLIDNQTVT 203 usage_00163.pdb 162 -------TYDSGIEAVEK---LLEEDEKP-TAIFVGTDEMALGVIHGAQDRGLNVPNDLE 210 usage_00164.pdb 162 -------SYEQGKALAER---LLER--GA-TSAVVSHDTVAVGLLSAMMDKGVKVPEDFE 208 usage_00165.pdb 161 -------SYEQGKALAER---LLER--GA-TSAVVSHDTVAVGLLSAMMDKGVKVPEDFE 207 usage_00190.pdb 162 -------TYDSGLEALQH---LMSLDKKP-TAILSATDEMALGIIHAAQDQGLSIPEDLD 210 g d a G p usage_00001.pdb 211 IIGF- 214 usage_00043.pdb 212 IIGFD 216 usage_00044.pdb 212 IIG-- 214 usage_00045.pdb 208 IIGF- 211 usage_00047.pdb 208 IIGFD 212 usage_00048.pdb 208 IIGFD 212 usage_00049.pdb 208 IIG-- 210 usage_00085.pdb 193 IIS-- 195 usage_00094.pdb 200 LAGF- 203 usage_00103.pdb 200 VIGF- 203 usage_00145.pdb 210 VVGF- 213 usage_00162.pdb 204 ATGF- 207 usage_00163.pdb 211 IIGF- 214 usage_00164.pdb 209 IIS-- 211 usage_00165.pdb 208 IIS-- 210 usage_00190.pdb 211 IIGFD 215 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################