################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:13 2021 # Report_file: c_0786_111.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00690.pdb # 2: usage_00952.pdb # 3: usage_00953.pdb # 4: usage_00996.pdb # # Length: 81 # Identity: 39/ 81 ( 48.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 81 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 81 ( 4.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00690.pdb 1 NIVYFGFDKYDIGSDFAQ-LDAHAAFLRSNPSDKVVVEGHADERGTPEYNIALGERRASA 59 usage_00952.pdb 1 RVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKA 60 usage_00953.pdb 1 RVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKA 60 usage_00996.pdb 1 NIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANA 60 V Fd D D Q L AHA FL N KV GH DERGT EYN aLGERRA A usage_00690.pdb 60 VK-YLQGKGVSADQISIVSYG 79 usage_00952.pdb 61 VQNYLITSGVNPQQLEAVSYG 81 usage_00953.pdb 61 VQNYLITSGVNPQQLEAVSYG 81 usage_00996.pdb 61 VKMYLQGKGVSADQISIVS-- 79 V YL GV Q VS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################