################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:04 2021 # Report_file: c_0462_126.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00188.pdb # 2: usage_00189.pdb # 3: usage_00190.pdb # 4: usage_00682.pdb # # Length: 106 # Identity: 16/106 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/106 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/106 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00188.pdb 1 NAMKIGVFDS--GVGGLSVLKSLYEARL-FDEIIYYGDTARVPY----GVKDKDTIIKFC 53 usage_00189.pdb 1 ----IGVFDS--GVGGLSVLKSLYEARL-FDEIIYYGDTARVPY----GVKDKDTIIKFC 49 usage_00190.pdb 1 -AMKIGVFDS--GVGGLSVLKSLYEARL-FDEIIYYGDTARVPY----GVKDKDTIIKFC 52 usage_00682.pdb 1 ----TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDIT------ 50 igvfds GvgGlsvlKsLyEarL fDeIiYygdtarvpy gvkDkd usage_00188.pdb 54 LE----ALDFFEQFQIDMLIIACN-TASAYALDALRAKAHFPVYGV 94 usage_00189.pdb 50 LE----ALDFFEQFQIDMLIIACN-TASAYALDALRAKAHFPVYGV 90 usage_00190.pdb 53 LE----ALDFFEQFQIDMLIIACN-TASAYALDALRAKAHFPVYGV 93 usage_00682.pdb 51 --IEETTETAF--EGVDIALFSAGSSTS-AKYAPYAVKAGVVVVDN 91 aldfF fqiDmliiacn taS yaldalraKAhfpVygv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################