################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:42 2021 # Report_file: c_0921_56.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00074.pdb # 2: usage_00124.pdb # 3: usage_00232.pdb # 4: usage_00279.pdb # 5: usage_00322.pdb # 6: usage_00376.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 45 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 45 ( 17.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00074.pdb 1 CQS-TSNH-LWLLSDILGQGATANVFRGRHKKTGDLYAVKVF--- 40 usage_00124.pdb 1 QPH-IGNY-RLQ--KTIGKGNFAKVKLARHVLTGREVAVKIIDKT 41 usage_00232.pdb 1 GDV-LSARYEIV--DTLGEGAFGKVVECIDHKAGG-RHVAVKIV- 40 usage_00279.pdb 1 RVK-IGHY-ILG--DTLGVGTFGKVKVGKHELTGHKVAVKILNR- 40 usage_00322.pdb 1 KII-NERY-KIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIF-- 39 usage_00376.pdb 1 NYVVKDRW-KVL--KKIGGGGFGEIYEAMDLLTRENVALKVES-- 40 G G v a k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################