################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:08:13 2021 # Report_file: c_1221_27.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01471.pdb # 2: usage_01482.pdb # 3: usage_01483.pdb # 4: usage_01844.pdb # # Length: 67 # Identity: 43/ 67 ( 64.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 67 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 67 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01471.pdb 1 KNYKSVTSVNEFLN--D--S-GKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKL 55 usage_01482.pdb 1 NNYRSVTSVNEFVV-LEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNL 59 usage_01483.pdb 1 -NYRSVTSVNEFVLK------KRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNL 53 usage_01844.pdb 1 -NYKSVTSVNEFLN-QD--S-GKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKL 55 NY SVTSVNEF VY VVLESY VDIP GNTEEDT MFVDTVVK NLQ L usage_01471.pdb 56 GVAATSA 62 usage_01482.pdb 60 AVIST-- 64 usage_01483.pdb 54 AVISTA- 59 usage_01844.pdb 56 GVAATSA 62 V T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################