################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:11 2021 # Report_file: c_0788_22.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00042.pdb # 2: usage_00122.pdb # 3: usage_00126.pdb # 4: usage_00186.pdb # 5: usage_00203.pdb # 6: usage_00204.pdb # 7: usage_00205.pdb # 8: usage_00206.pdb # 9: usage_00243.pdb # 10: usage_00244.pdb # 11: usage_00262.pdb # 12: usage_00263.pdb # 13: usage_00410.pdb # # Length: 107 # Identity: 13/107 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/107 ( 22.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/107 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 --QTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIALVG--GATARLGDPSGRTKER 56 usage_00122.pdb 1 --VTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00126.pdb 1 --VTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00186.pdb 1 RPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDF---------------- 44 usage_00203.pdb 1 --VTLYCGFDPTADSLHIGHLAAILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00204.pdb 1 --VTLYCGFDPTADSLHIGHLAGILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00205.pdb 1 --VTLYCGFDPTADSLHIGHLAPILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00206.pdb 1 --VTLYCGFDPTADSLHIGHLASILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 usage_00243.pdb 1 --VTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIG--GGTGMIGDPSGKSEER 56 usage_00244.pdb 1 --VTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIG--GGTGMIGDPSGKSEER 56 usage_00262.pdb 1 --MTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAG--GATGMIG--------- 47 usage_00263.pdb 1 --MTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAG--GATGMIG--------- 47 usage_00410.pdb 1 --VTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVG--GATGLIGDPSGKKSER 56 T y G DPTa sLH GHl l r fQ GH i l G usage_00042.pdb 57 EALETE-RVRANARALRLGLEALAANHQQLFTD-GRSWGSFTVLDNS 101 usage_00122.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00126.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00186.pdb 45 --------TRENAKTYVAQAGKILR-------QEP-H--LFELRY-- 71 usage_00203.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00204.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00205.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00206.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 usage_00243.pdb 57 VLQTEE-QVDKNIEGISKQMHNIFE-------FGTDH-GAVLVN--- 91 usage_00244.pdb 57 VLQTEE-QVDKNIEGISKQMHNIFE-------FGTDH-GAVLVN--- 91 usage_00262.pdb 48 -------TVAEWTERIRGQLERFVD-------FDDSP-MGAIVEN-- 77 usage_00263.pdb 48 ------DTVAEWTERIRGQLERFVD-------FDDSP-MGAIVEN-- 78 usage_00410.pdb 57 TLNAKE-TVEAWSARIKEQLGRFLD-------FEADG-NPAKIKN-- 92 v q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################