################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:52:38 2021 # Report_file: c_0656_110.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00020.pdb # 2: usage_00076.pdb # 3: usage_00077.pdb # 4: usage_00218.pdb # 5: usage_00235.pdb # 6: usage_00237.pdb # 7: usage_00542.pdb # 8: usage_00549.pdb # 9: usage_00561.pdb # 10: usage_00636.pdb # 11: usage_00708.pdb # 12: usage_00788.pdb # 13: usage_00789.pdb # 14: usage_00790.pdb # 15: usage_00791.pdb # 16: usage_00792.pdb # 17: usage_00793.pdb # 18: usage_00794.pdb # 19: usage_00810.pdb # 20: usage_00851.pdb # 21: usage_00852.pdb # 22: usage_00884.pdb # 23: usage_00889.pdb # 24: usage_00919.pdb # 25: usage_00939.pdb # 26: usage_00957.pdb # 27: usage_01022.pdb # 28: usage_01074.pdb # 29: usage_01100.pdb # 30: usage_01127.pdb # 31: usage_01129.pdb # 32: usage_01130.pdb # 33: usage_01210.pdb # 34: usage_01239.pdb # 35: usage_01261.pdb # # Length: 60 # Identity: 3/ 60 ( 5.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 60 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 60 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 --SGSKSGTSASLAISGLQSEDEAVYYCAAWDDS--------LSAHVVFGGGTKLTV--- 47 usage_00076.pdb 1 RFSGSNSGTSASLAISRLQSEDEADYYCAAWDDS--------LNGVVFGGGTKV-TV--- 48 usage_00077.pdb 1 --SDSNSGTTATLTISRVEAGDEADYYCQVWDSD--------SDHVVFGGGTKL-TV--- 46 usage_00218.pdb 1 -FSGSKSGTSATLGITGLQTGDEANYYCATWDRT--------AYVVFGG-GTKL-T---- 45 usage_00235.pdb 1 --SGSKSGTSASLAISGLQSEDEADYYCEAWDDS--------LDGVVFGGGTKL-TV--- 46 usage_00237.pdb 1 --SGSKSGTSATLGITGLQTGDEADYFCATWDSG--------LSADWVFGGGTKLTV--- 47 usage_00542.pdb 1 --SGSKSGTSATLAITGLQAGDEADYYCGTWDIS--------LSAGLFGGGTKV-TV--- 46 usage_00549.pdb 1 --KYDTYGLRMILR--NLIENDSGVYYCATWDEK--------YYKKLFGSGTTL-VVTE- 46 usage_00561.pdb 1 --SGSKSGTSASLAISGLRSEDEADYYCATWDDS--------LSAVIFGGGTKL-T---- 45 usage_00636.pdb 1 --SGSKSGTSASLAISGLRSEDEAEYYCGTWDD----------NSWVFGGGTKL-TV--- 44 usage_00708.pdb 1 --SGSKSGTSASLAISGLRSEDEADYYCAAWDDS--------PPGEAFGGGTKL-TV-LG 48 usage_00788.pdb 1 --SGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 46 usage_00789.pdb 1 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 48 usage_00790.pdb 1 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 48 usage_00791.pdb 1 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 48 usage_00792.pdb 1 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 48 usage_00793.pdb 1 --SGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 46 usage_00794.pdb 1 RFSGSRSGTSASLTISGLQSEDEADYYAATWDDS--------LNGWVFGGGTKV-TV--- 48 usage_00810.pdb 1 -FSGSSSGTMATLTISGAQVEDEADYYCYSTDSS--------GNHRVFGGGTKL-TV--- 47 usage_00851.pdb 1 RLSGSKSGKTATLTISGTQSLDEGDYYCQAWDASTGVSGGGTKLTVLFGEGTRL-TV--- 56 usage_00852.pdb 1 --SGSRSGTSATLGIIGLQTGDEAEYYCATWDGS--------LRTVFGG-GTKL-TV--- 45 usage_00884.pdb 1 --SGSKSGTSATLGITGLQTGDEADYFCATWDSG--------LSADWVFGGGTKLTV--- 47 usage_00889.pdb 1 --SGSKSGSSASLAITGLQTGDEADYYCGAWDGS--------LNVHIFGSGTKL-TV--- 46 usage_00919.pdb 1 --SGSKSGNSASLDISGLQSEDEADYYCAAWDDS--------LSEFLFGTGTKL-TV--- 46 usage_00939.pdb 1 --KYDTY--NLRMILR--IENDSGVYYCATWDQN--------YYKKLFGSGTSL-V---- 41 usage_00957.pdb 1 --SGSKSGTSASLAISGLRSEDEADYYCAAWDDS--------LSGPYVFGAGTKLTV--- 47 usage_01022.pdb 1 --SGSKSATSASLAISGLQSEDEADYYCAAWDDS--------LNGFWVFGGGTKLTV--- 47 usage_01074.pdb 1 --SGSKSGTSASLAITGLQAEDEADYYCQSYDSS--------LSARFGG-GTRL-TV--- 45 usage_01100.pdb 1 --SASRSGNTASLTITGLQPEDEADYYCSTWDSS--------LSAVVFGGGTKL-TV--- 46 usage_01127.pdb 1 --SGSKSGTSASLAISGLQSEDEADYYCAAWDDS--------LNDWVFGGGTKV-TVLA- 48 usage_01129.pdb 1 --SGSKSGTSASLAISGLQSEDEADYYCAAWDDS--------LNDWVFGGGTKV-TV--- 46 usage_01130.pdb 1 --SGSKSGTSASLAISGLQSEDEADYYCAAWDDS--------LNDWVFGGGTKV-TV--- 46 usage_01210.pdb 1 -FSGSKSGTSASLAINGLQSEDEADYYCAVWDDS--------LSGRWVFGGGTKVTV--- 48 usage_01239.pdb 1 --SGSRSGTSATLGIIGLQTGDEAEYYCATWDGS--------LRTVFGG-GTKL-TV--- 45 usage_01261.pdb 1 -FSGSKSGTSASLAITGLQAEDEADYYCQSYDSS--------LSGYVFGTGTKV-TV--- 47 l D Y D g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################