################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:54 2021 # Report_file: c_1227_162.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00759.pdb # 2: usage_01079.pdb # 3: usage_01528.pdb # 4: usage_01570.pdb # 5: usage_01576.pdb # 6: usage_01577.pdb # 7: usage_01578.pdb # 8: usage_01579.pdb # # Length: 39 # Identity: 2/ 39 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 39 ( 12.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 39 ( 51.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00759.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALDDVAN- 28 usage_01079.pdb 1 PGVVYFADDDN-------TYSLELFEEMRST-------- 24 usage_01528.pdb 1 --GKS--A-GNAIWLDPYQTSVFDFYGYFVRR------- 27 usage_01570.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALDDVANG 29 usage_01576.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALD----- 24 usage_01577.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALD----- 24 usage_01578.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALD----- 24 usage_01579.pdb 1 QSTNC--G-GN-------VYSNDDINTAIQGALDD---- 25 gN yS d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################