################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:34:18 2021 # Report_file: c_0055_14.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00021.pdb # 2: usage_00058.pdb # 3: usage_00155.pdb # 4: usage_00156.pdb # 5: usage_00157.pdb # 6: usage_00229.pdb # 7: usage_00241.pdb # 8: usage_00242.pdb # 9: usage_00360.pdb # 10: usage_00361.pdb # 11: usage_00362.pdb # # Length: 205 # Identity: 100/205 ( 48.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/205 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/205 ( 7.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 TIYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTIQTRMNLEMAVTDEMVD 60 usage_00058.pdb 1 ----DPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLD 56 usage_00155.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00156.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00157.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00229.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00241.pdb 1 -----PVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLA 55 usage_00242.pdb 1 -----PVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLA 55 usage_00360.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00361.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 usage_00362.pdb 1 -----PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 55 PV AA AE AGADgITvHLREDRRHI rDVR L TRMN Em VT EMl usage_00021.pdb 61 IACDIKPHFCCLVPEKRQEVTTEGGLDVAGQVDKMTLAVGRLADVGILVSLFIDADFRQI 120 usage_00058.pdb 57 IACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQI 116 usage_00155.pdb 56 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 115 usage_00156.pdb 56 IAVETKPHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 108 usage_00157.pdb 56 IAVETKPHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 108 usage_00229.pdb 56 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 115 usage_00241.pdb 56 FAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQI 115 usage_00242.pdb 56 FAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQI 115 usage_00360.pdb 56 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 115 usage_00361.pdb 56 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 115 usage_00362.pdb 56 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI 115 A e P CLVPE EGGLDVaGq r A rLA G VSLFID D QI usage_00021.pdb 121 DAAVAAGAPYIEIHTGAYADASTVLERQAELMRIAKAATYAAGKGLKVNAGHGLTYHNVQ 180 usage_00058.pdb 117 RAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNAGHGLHYTNVQ 176 usage_00155.pdb 116 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 175 usage_00156.pdb 109 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 168 usage_00157.pdb 109 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 168 usage_00229.pdb 116 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 175 usage_00241.pdb 116 EASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVE 175 usage_00242.pdb 116 EASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVE 175 usage_00360.pdb 116 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 175 usage_00361.pdb 116 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 175 usage_00362.pdb 116 KAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVK 175 A GAP IE HTG YADA Eq El R lGL VNAGHGL YhNV usage_00021.pdb 181 PIAALPEMHELNIGHAIIGQA---- 201 usage_00058.pdb 177 AIAALPGIAELNIGHAIVAHAV--- 198 usage_00155.pdb 176 AIAAIPEMHELNIGHAIIGRAV--- 197 usage_00156.pdb 169 AIAAIPEMHELNIGHAIIGRAV--- 190 usage_00157.pdb 169 AIAAIPEMHELNIGHAIIGRAV--- 190 usage_00229.pdb 176 AIAAIPEMHELNIGHAIIGRAVMTG 200 usage_00241.pdb 176 PVAAIDGINELNIGHAIVAHA---- 196 usage_00242.pdb 176 PVAAIDGINELNIGHAIVAHA---- 196 usage_00360.pdb 176 AIAAIPEMHELNIGHAIIGRAV--- 197 usage_00361.pdb 176 AIAAIPEMHELNIGHAIIGRAV--- 197 usage_00362.pdb 176 AIAAIPEMHELNIGHAIIGRA---- 196 AA ELNIGHAI A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################