################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:29 2021 # Report_file: c_0270_59.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00054.pdb # 2: usage_00072.pdb # 3: usage_00086.pdb # 4: usage_00148.pdb # # Length: 287 # Identity: 5/287 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/287 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 175/287 ( 61.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb ------------------------------------------------------------ usage_00072.pdb 1 ---DPNTHLEPLIRSLFNGLMNSPKMAASCCWALMNIAERFA----G--EP--GAAQNPL 49 usage_00086.pdb 1 --------LAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADV-ADDQEEPATYCL 51 usage_00148.pdb 1 EDD-IVPHVLPFIKEHIKN-P-DWRYRDAAVMAFGCILE-------GP-EP------SQL 43 usage_00054.pdb 1 ---FELIVQKLLETTDRP--DG-HQNNLRSSAYESLMEIVKNSAKD--CYPAVQKTTLVI 52 usage_00072.pdb 50 TPHFNQSVTNLLTVTAPMNG-DS---TVRTAAYEVLSVFVQNAAND--SLSAVASLSTVI 103 usage_00086.pdb 52 SSSFELIVQKLLETTDRP--DG-HQNNLRSSAYESLMEIVKNSAKD--CYPAVQKTTLVI 106 usage_00148.pdb 44 KPLVIQAMPTLIELMKD--P-SV---VVRDTAAWTVGRICELLPEAAINDVYLAPLLQCL 97 f v Lle t R Aye l iv n a d av vi usage_00054.pdb 53 MERLQ-QVLQM-------SDRIQFNDLQSLLCATLQNVLRKVQ-------------HQDA 91 usage_00072.pdb 104 LQRLE-ETLPLQQQVVSVEDKLILEDMQTSLCTVLQATVQRLD-----------KEIAPQ 151 usage_00086.pdb 107 MERLQ-QVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQ-------------HQDA 152 usage_00148.pdb 98 IEGLSA-----------------EPRVASNVCWAFSSLAEAAYEAADDQEEPATYCLSSS 140 erL d qs lC lq usage_00054.pdb 92 LQISDVVMASLLRMFQ---STAGSGGV-QEDALMAVSTLVEVLGGEFLKYMEAFKPFLGI 147 usage_00072.pdb 152 GDRIMQVLLQILSTCGG-----------K---SSVPEGVFAAI----------------- 180 usage_00086.pdb 153 LQISDVVMASLLRMF------------QS---GGVQEDALMAV----------------- 180 usage_00148.pdb 141 FELIVQKLLETTDR-PDGH---------Q---NNLRSSAYESL----------------- 170 v l usage_00054.pdb 148 GQVCLAAVGLVGDLCRAL----QSNII-PF---CDEVMQLLLENL-- 184 usage_00072.pdb 181 -----------SAL----ANAMEEEFA-KY----------------- 194 usage_00086.pdb 181 -----------STL----VEVLGGEFL-KY----------------- 194 usage_00148.pdb 171 -----------MEI----VKNSAKDCYPAVQKTTLVIMERLQQVLQM 202 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################