################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:37 2021 # Report_file: c_1281_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00056.pdb # 2: usage_00573.pdb # 3: usage_00574.pdb # 4: usage_00575.pdb # 5: usage_00576.pdb # 6: usage_00577.pdb # 7: usage_00801.pdb # 8: usage_01016.pdb # # Length: 49 # Identity: 0/ 49 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 49 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 49 ( 85.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 ---NAQDKF-------------TPFDLAIDNGNEI--A--EVLQK---- 25 usage_00573.pdb 1 ---------VLRISRDSYQLLKRHLQEKQ------N-N--QIWNIVQE- 30 usage_00574.pdb 1 ---------VLRISRDSYQLLKRHLQEKQ------N-N--QIWNIVQ-- 29 usage_00575.pdb 1 ---------VLRISRDSYQLLKRHLQEKQ------N-N--QIWNIVQE- 30 usage_00576.pdb 1 ---------VLRISRDSYQLLKRHLQEKQ------N-N--QIWNIVQE- 30 usage_00577.pdb 1 ---------VLRISRDSYQLLKRHLQEKQ------N-N--QIWNIVQ-- 29 usage_00801.pdb 1 --P------DITFDSLALIKMHS----Q-------NMK--RILEVTLAK 28 usage_01016.pdb 1 MV--------LEGTIAESIEHLDKK----------E-NEDILNNN---- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################