################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:58 2021 # Report_file: c_1434_199.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01703.pdb # 2: usage_01861.pdb # 3: usage_03015.pdb # 4: usage_03349.pdb # # Length: 79 # Identity: 3/ 79 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 79 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 79 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01703.pdb 1 ------------VKALEE---KVKALEEKVKALGGGGRIEELKKKCEELKKKIEELGGGG 45 usage_01861.pdb 1 -----------------E---KVKALEEKVKALGGGGRIEELKKKWEELKKKIEELGGGG 40 usage_03015.pdb 1 SNLIQAVTRRFSTEYELQ---QLEQFKKDNEETG----FGSGTRALEQALEKTKANI--- 50 usage_03349.pdb 1 ------------GSRVKALEEKVKALEEKVKALGGGGRIEELKKKYEELKKKIEELGGGG 48 kvkaleekvkalG ieelkkk EelkkKieelg usage_01703.pdb 46 EVKKVEEEVKKLEEEIK-- 62 usage_01861.pdb 41 EVKKVEEEVKKLEEEIKKL 59 usage_03015.pdb 51 ------------KWVKE-- 55 usage_03349.pdb 49 EVKKVEEEVKKLEEEIKKL 67 eeeik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################