################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:07 2021 # Report_file: c_1169_2.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00210.pdb # 2: usage_00471.pdb # 3: usage_00472.pdb # 4: usage_00753.pdb # 5: usage_00754.pdb # 6: usage_01167.pdb # 7: usage_01168.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 61 ( 27.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 61 ( 49.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00210.pdb 1 IPLYKKMEAVKL----RDLKTY-SV-QLKLYDDKNASLGLVGTHNGQIGNDPNRDILIAS 54 usage_00471.pdb 1 ---NQVVVMNS-------------C-TMNFKNNNGNNIGLLGFKA---------DTVVAS 34 usage_00472.pdb 1 ---NQVVVMNS-------------C-TMNFKNNNGNNIGLLGFKA---------DTVVAS 34 usage_00753.pdb 1 -----VVVMKSK-NDQ---GIT-NKCKMNLQDNNGNDIGFIGFHQF-----NNIAKLVA- 44 usage_00754.pdb 1 -----VVVMKSK-NDQ---GIT-NKCKMNLQDNNGNDIGFIGFHQF-----NNIAKLVAS 45 usage_01167.pdb 1 -----VVVMKSKI--------TNKC-KMNLQDNNGNDIGFIGFHQF-----NNIAKLVAS 41 usage_01168.pdb 1 -----VVVMKSK-ND------TNKC-KMNLQDNNGNDIGFIGFHQF-----NNIAKLVAS 42 vvvm s mn nngn iG Gf vA usage_00210.pdb 55 N 55 usage_00471.pdb 35 T 35 usage_00472.pdb 35 T 35 usage_00753.pdb - usage_00754.pdb 46 N 46 usage_01167.pdb 42 N 42 usage_01168.pdb 43 N 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################