################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:54 2021 # Report_file: c_0599_5.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00024.pdb # 5: usage_00031.pdb # 6: usage_00037.pdb # 7: usage_00047.pdb # # Length: 125 # Identity: 20/125 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 38/125 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/125 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -PSRRRLMRDFKKLQEDPPAGVSGAPTE------DNILTWEAIIFGPQETPFEDGTFKLS 53 usage_00003.pdb 1 TPSRRRLMRDFKKLQEDPPAGVSGAPTE------DNILTWEAIIFGPQETPFEDGTFKLS 54 usage_00004.pdb 1 --KK-RLAQERAEWRKDHPAGFSAKYSPMSDGKGLDIMKWICKIPGKKGGLWEGGEYPLT 57 usage_00024.pdb 1 --VGKRLQQELMTLMMSGDKGISAFPES------DNLFKWVGTIHGAAGTVYEDLRYKLS 52 usage_00031.pdb 1 TPARRRLMRDFKRLQEDPPVGVSGAPSE------NNIMQWNAVIFGPEGTPFEDGTFKLV 54 usage_00037.pdb 1 GRAYLLLHRDFCDLKENNYKGITAKPVS------EDMMEWEVEIEGLQNSVWQGLVFQLT 54 usage_00047.pdb 1 -PARRRLMRDFKRLQEDPPVGVSGAPSE------NNIMQWNAVIFGPEGTPFEDGTFKLV 53 rL l G s p W I G e L usage_00002.pdb 54 LEFTEEYPNKPPTVKFISKMFHPNVYAD-GSICLDILQ--N--RWSPTYDVAAILTSIQS 108 usage_00003.pdb 55 LEFTEEYPNKPPTVKFISKMFHPNVYAD-GSICLDILQ--N--RWSPTYDVAAILTSIQS 109 usage_00004.pdb 58 MEFTEDYPSKPPKCKFTTVLFHPNIYPS-GTVCLSILNEDE--DWKPSITIKQILLGIQD 114 usage_00024.pdb 53 LEFPSGYPYNAPTVKFLTPCYHPNVDTQ-GNISLDILK--E--KWSALYDVRTILLSIQS 107 usage_00031.pdb 55 IEFSEEYPNKPPTVRFLSKMFHPNVYAD-GSICLDILQ--N--RWSPTYDVSSILTSIQS 109 usage_00037.pdb 55 IHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLD--NPEKWNTNYTLSSILLALQV 112 usage_00047.pdb 54 IEFSEEYPNKPPTVRFLSKMFHPNVYAD-GSICLDILQ--N--RWSPTYDVSSILTSIQS 108 eF Yp pP v F fHPNv G cldiL W y IL iQ usage_00002.pdb 109 LLDEP 113 usage_00003.pdb 110 LLDEP 114 usage_00004.pdb 115 LLDNP 119 usage_00024.pdb 108 LLGEP 112 usage_00031.pdb 110 LLDEP 114 usage_00037.pdb 113 MLSN- 116 usage_00047.pdb 109 LLD-- 111 lL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################