################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1479_229.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00239.pdb # 2: usage_00240.pdb # 3: usage_00242.pdb # 4: usage_00243.pdb # 5: usage_00541.pdb # 6: usage_00637.pdb # 7: usage_00840.pdb # 8: usage_01192.pdb # 9: usage_01193.pdb # 10: usage_01194.pdb # 11: usage_01195.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 66 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 66 ( 77.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 ---R---A----LQSSALKAWGGKESG--LAAG--RRAFL-----------HRARMNSMA 35 usage_00240.pdb 1 ---R---A----LQSSALKAWGGKESG--LAAG--RRAFL-----------HRARMNSMA 35 usage_00242.pdb 1 ---------------SALKAWGGKESG--LAAG--RRAFL-----------HRARMNSMA 30 usage_00243.pdb 1 ---------------SALKAWGGKESG--LAAG--RRAFL-----------HRARMNSMA 30 usage_00541.pdb 1 -WEQ---E----LAQLEAW------------SY--EARER-----------HVAERLLMH 27 usage_00637.pdb 1 ----FEKEYWDRVFEY-----------------FLAEYRAGRTPNPDVCNKEIKFKAFLD 39 usage_00840.pdb 1 IM-D---Y----CKKEWR---------GNTQKA--TCMKM-----------GYEEVSQKF 30 usage_01192.pdb 1 --------------AAALKAWAGKNEN--IVVA--QKAFC-----------HRARMNHLA 31 usage_01193.pdb 1 ---R---A----LQAAALKAWAGKNEN--IVVA--QKAFC-----------HRARMNHLA 35 usage_01194.pdb 1 ---R---A----LQAAALKAWAGKNEN--IVVA--QKAFC-----------HRARMNHLA 35 usage_01195.pdb 1 ---R---A----LQAAALKAWAGKNEN--IVVA--QKAFC-----------HRARMNHLA 35 usage_00239.pdb 36 QLG--- 38 usage_00240.pdb 36 QLG--- 38 usage_00242.pdb 31 QLG--- 33 usage_00243.pdb 31 QLG--- 33 usage_00541.pdb 28 LEEMQ- 32 usage_00637.pdb 40 YAITLG 45 usage_00840.pdb ------ usage_01192.pdb 32 ALG--- 34 usage_01193.pdb 36 ALG--- 38 usage_01194.pdb 36 ALG--- 38 usage_01195.pdb 36 ALG--- 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################