################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:36 2021 # Report_file: c_0778_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00006.pdb # 2: usage_00024.pdb # 3: usage_00256.pdb # 4: usage_00263.pdb # 5: usage_00294.pdb # 6: usage_00471.pdb # # Length: 143 # Identity: 7/143 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/143 ( 13.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/143 ( 46.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 VIYQIVTD-RFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAI 59 usage_00024.pdb 1 VFYQVYPR-SFKDTNGD------------------GIGDFKGLTEKL--DYLKGLGIDAI 39 usage_00256.pdb 1 VIYQIFTD-RFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINKINDGYLTGMGITAI 59 usage_00263.pdb 1 ATYRLQLNK---------------------------NFNFGDVIDNL--WYF-DLGVSHL 30 usage_00294.pdb 1 VIYQIFTD-RFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINKINDGYLTGMGITAI 59 usage_00471.pdb 1 -VIMQ-AF-YWDVP-GG------------------GI-WWDHIRSKI--PEWYEAGISAI 35 y k y G ai usage_00006.pdb 60 WISQPVENI---YAVLPDSTF-GGSTS---YHGYWARDFKRT----------NPYFGSFT 102 usage_00024.pdb 40 WINPHYASPNTD-------------------NGYDISDYREV----------MKEYGTME 70 usage_00256.pdb 60 WISQPVENI---YSVINYS--GVNNTA---YHGLWARDFKKT----------NPAYGTMQ 101 usage_00263.pdb 31 YLSPVLMAS---P------------GS---NHGYDVIDHSRI----------NDELGGEK 62 usage_00294.pdb 60 WISQPVENI---YSVINYS--GVNNTA---YHGYWARDFKKT----------NPAYGTMQ 101 usage_00471.pdb 36 WLPPPSKGM---S--------------GGYSMGYDPYDYFDLGEYYQKGTVET-RFGSKE 77 w Gy D G usage_00006.pdb 103 DFQNLINTAHAHNIKVIIDFAPN 125 usage_00024.pdb 71 DFDRLMAELKKRGMRLMVDVVIN 93 usage_00256.pdb 102 DFKNLIDTAHAHNIKVIIDFAPN 124 usage_00263.pdb 63 EYRRLIETAHTIGLGIIQDIVPN 85 usage_00294.pdb 102 DFKNLIDTAHAHNIKVIIDFAPN 124 usage_00471.pdb 78 ELVRLIQTAHAYGIKVIADVVIN 100 Li tah i D N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################