################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:20 2021 # Report_file: c_0618_1.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00034.pdb # 2: usage_00043.pdb # 3: usage_00124.pdb # 4: usage_00177.pdb # 5: usage_00178.pdb # 6: usage_00179.pdb # # Length: 88 # Identity: 25/ 88 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 88 ( 40.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 88 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 SYAQLIVQAITMAPDK-QLTLNGIYTHITKNYPYYRTA-------DKGWQNSIRHNLSLN 52 usage_00043.pdb 1 -YAELISQAIESAPEK-RLTLAQIYEWMVRTVPYFK--DKGDSNSSAGWKNSIRHNLSLH 56 usage_00124.pdb 1 -YIALITMAIRDSAG-GRLTLAEINEYLMGKFPFFR--GS-Y---T-GWRNSVRHNLSLN 51 usage_00177.pdb 1 SYADLITKAIESSAEK-RLTLSQIYEWMVKSVPYFK--DKGDSNSSAGWKNSIRHNLSLH 57 usage_00178.pdb 1 SYADLITKAIESSAEK-RLTLSQIYEWMVKSVPYFK--DKGDSNSSAGWKNSIRHNLSLH 57 usage_00179.pdb 1 SYADLITKAIESSAEK-RLTLSQIYEWMVKSVPYFK--DKGDSNSSAGWKNSIRHNLSLH 57 Ya LI AI rLTL Iye Pyf GW NSiRHNLSL usage_00034.pdb 53 RYFIKVP-RSQEEP----GKGSFWRI-- 73 usage_00043.pdb 57 SKFIKVH-NEAT------GKSSWWML-- 75 usage_00124.pdb 52 DCFVKVLRDP----SRPWGKDNYWMLNP 75 usage_00177.pdb 58 SKFIRVQ-NEGT------GKSSWWML-- 76 usage_00178.pdb 58 SKFIRVQ-NEGT------GKSSWWML-- 76 usage_00179.pdb 58 SKFIRVQ-NEGT------GKSSWWML-- 76 Fi V GK s Wml #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################