################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:19 2021 # Report_file: c_0101_10.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00024.pdb # 2: usage_00074.pdb # 3: usage_00126.pdb # 4: usage_00151.pdb # 5: usage_00171.pdb # 6: usage_00172.pdb # 7: usage_00173.pdb # 8: usage_00174.pdb # 9: usage_00175.pdb # 10: usage_00176.pdb # 11: usage_00177.pdb # 12: usage_00178.pdb # 13: usage_00252.pdb # 14: usage_00271.pdb # 15: usage_00272.pdb # 16: usage_00295.pdb # 17: usage_00330.pdb # 18: usage_00360.pdb # # Length: 267 # Identity: 28/267 ( 10.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/267 ( 13.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 86/267 ( 32.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 --EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-RLNFITEYIKGGTLRGIIKSMDSQ 57 usage_00074.pdb 1 -TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKHDAQ 58 usage_00126.pdb 1 -TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKHDAQ 58 usage_00151.pdb 1 ---------LQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFS 49 usage_00171.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00172.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00173.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00174.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00175.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00176.pdb 1 ----------SEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 49 usage_00177.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00178.pdb 1 -SEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEFMENGALDSFLRQNDGQ 58 usage_00252.pdb 1 ------------VKVMRSLDHPNVLKFIGVLYKDK-KLNLLTEYIEGGTLKDFLRS-MDP 46 usage_00271.pdb 1 -TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKDGE 58 usage_00272.pdb 1 -TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKDGE 58 usage_00295.pdb 1 DISQTIENVRQEAKLFAMLKHPNIIALRGVCL-KEPNLCLVMEFARGGPLNRVLSGK--R 57 usage_00330.pdb 1 --DKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKNDGR 57 usage_00360.pdb 1 -SDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFS 57 m H GV E G L l usage_00024.pdb 58 YPWSQRVSFAKDIASGMAYLHS-M--NIIHRDLNSHNCLVRE--------NKNVVVADF- 105 usage_00074.pdb 59 FTVIQLVGMLRGIASGMKYLSD-M--GYVHRDLAARNILINS--------NLVCKVSDF- 106 usage_00126.pdb 59 FTVIQLVGMLRGIASGMKYLSD-M--GYVHRDLAARNILINS--------NLVCKVSDF- 106 usage_00151.pdb 50 LDLASLILYAYQLSTALAYLES-K--RFVHRDIAARNVLVSS--------NDCVKLGDF- 97 usage_00171.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00172.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00173.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00174.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00175.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00176.pdb 50 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 97 usage_00177.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00178.pdb 59 FTVIQLVGMLRGIAAGMKYLAE-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00252.pdb 47 FPWQQKVRFAKGIASGMAYLHS-M--CIIHRDLNSHNCLIKL--------DKTVVVADFG 95 usage_00271.pdb 59 FSVLQLVGMLRGIAAGMKYLAN-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00272.pdb 59 FSVLQLVGMLRGIAAGMKYLAN-M--NYVHRDLAARNILVNS--------NLVCKVSDF- 106 usage_00295.pdb 58 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF- 116 usage_00330.pdb 58 FTVIQLVGMLRGIGSGMKYLSD-M--SAVHRDLAARNILVNS--------NLVCKVSDF- 105 usage_00360.pdb 58 LDLASLILYAYQLSTALAYLES-K--RFVHRDIAARNVLVSA--------TDCVKLGDF- 105 YL HRD N L DF usage_00024.pdb 106 G-LA---RLM------V---YTVV---------GNPYWMAPEMINGRSYDEKVDVFSFGI 143 usage_00074.pdb 107 G-LA---RV------------------------IPIRWTSPEAIAYRKFTSASDVWSYGI 138 usage_00126.pdb 107 G-LS---RV-------------------------PIRWTSPEAIAYRKFTSASDVWSYGI 137 usage_00151.pdb 98 G-LS---RYM------E-------DSTKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 140 usage_00171.pdb 107 G-LS---RYL------Q--------------GKIPVRWTAPEAIAYRKFTSASDVWSYGI 142 usage_00172.pdb 107 G-LS---RYL-------------------------VRWTAPEAIAYRKFTSASDVWSYGI 137 usage_00173.pdb 107 G-LS---RYL------Q--------------GKIPVRWTAPEAIAYRKFTSASDVWSYGI 142 usage_00174.pdb 107 G-LS---RYL---------------------GKIPVRWTAPEAIAYRKFTSASDVWSYGI 141 usage_00175.pdb 107 G-LS---RYL-------------------------VRWTAPEAIAYRKFTSASDVWSYGI 137 usage_00176.pdb 98 G-LS---RYL-------------------------VRWTAPEAIAYRKFTSASDVWSYGI 128 usage_00177.pdb 107 G-LS---RYL---------------------GKIPVRWTAPEAIAYRKFTSASDVWSYGI 141 usage_00178.pdb 107 G-LS---RYL---------------------GKIPVRWTAPEAIAYRKFTSASDVWSYGI 141 usage_00252.pdb 96 L-SR---LIV-------KKRYTVV---------GNPYWMAPEMLNGKSYDETVDIFSFGI 135 usage_00271.pdb 107 G-LS---RVL------E----------------IPIRWTAPEAISYRKFTSASDVWSFGI 140 usage_00272.pdb 107 G-LS---RVL---------------------K-IPIRWTAPEAISYRKFTSASDVWSFGI 140 usage_00295.pdb 117 GLAREWHRTTKMSAAG------------------TYAWMAPEVIRASMFSKGSDVWSYGV 158 usage_00330.pdb 106 G-MS---RV----------------------K-IPIRWTAPEAIAYRKFTSASDVWSYGI 138 usage_00360.pdb 106 G-LS---RY------------------------LPIKWMAPESINFRRFTSASDVWMFGV 137 g r W PE i Dv G usage_00024.pdb 144 VLCEIIGRV-NADPDYLPR--------TMDF-GLNVRGFLDRYCPPNCPPSFFPITVRCC 193 usage_00074.pdb 139 VLWEVMSYGERPY---WEMSNQDVIKAVDEG-YRL-------PPPMDCPAALYQLMLDCW 187 usage_00126.pdb 138 VLWEVMSYGERPY---WEMSNQDVIKAVDEG-YRL-------PPPMDCPAALYQLMLDCW 186 usage_00151.pdb 141 CMWEILMHGVKPF---QGVKNNDVIGRIENG-ERL-------PMPPNCPPTLYSLMTKCW 189 usage_00171.pdb 143 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 191 usage_00172.pdb 138 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 186 usage_00173.pdb 143 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 191 usage_00174.pdb 142 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 190 usage_00175.pdb 138 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 186 usage_00176.pdb 129 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 177 usage_00177.pdb 142 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 190 usage_00178.pdb 142 VMWEVMSFGERPY---WDMSNQDVINAIEQD-YRL-------PPPMDCPAALHQLMLDCW 190 usage_00252.pdb 136 VLCEIIGQV-YADPDCLPR--------TLDF-GLNVKLFWEKFVPTDCPPAFFPLAAICC 185 usage_00271.pdb 141 VMWEVMTYGERPY---WELSNHEVMKAINDG-FRL-------PTPMDCPSAIYQLMMQCW 189 usage_00272.pdb 141 VMWEVMTYGERPY---WELSNHEVMKAINDG-FRL-------PTPMDCPSAIYQLMMQCW 189 usage_00295.pdb 159 LLWELLTGE-VPF---RGIDGLAVAYGVAMNKLAL-------PIPSTCPEPFAKLMEDCW 207 usage_00330.pdb 139 VMWEVMSYGERPY---WDMSNQDVIKAIEEG-YRL-------PPPMDCPIALHQLMLDCW 187 usage_00360.pdb 138 CMWEILMHGVKPF---QGVKNNDVIGRIENG-ERL-------PMPPNCPPTLYSLMTKCW 186 E P CP l C usage_00024.pdb 194 DLDPEKRPSFVKLEHWLETLRMHLAGH 220 usage_00074.pdb 188 QKDRNNRPKFEQIVSILDKLIRN---- 210 usage_00126.pdb 187 QKDRNNRPKFEQIVSILDKLIRN---- 209 usage_00151.pdb 190 AYDPSRRPRFTELKAQLSTILEEEKLQ 216 usage_00171.pdb 192 QKDRNSRPRFAEIVNTLDKMIRN---- 214 usage_00172.pdb 187 QKDRNSRPRFAEIVNTLDKMI------ 207 usage_00173.pdb 192 QKDRNSRPRFAEIVNTLDKMI------ 212 usage_00174.pdb 191 QKDRNSRPRFAEIVNTLDKMI------ 211 usage_00175.pdb 187 QKDRNSRPRFAEIVNTLDKMIRN---- 209 usage_00176.pdb 178 QKDRNSRPRFAEIVNTLDKMIRN---- 200 usage_00177.pdb 191 QKDRNSRPRFAEIVNTLDKMIRN---- 213 usage_00178.pdb 191 QKDRNSRPRFAEIVNTLDKMIRN---- 213 usage_00252.pdb 186 RLEPESRPAFSKLEDSFEALSLYLG-- 210 usage_00271.pdb 190 QQERARRPKFADIVSILDKLIRA---- 212 usage_00272.pdb 190 QQERARRPKFADIVSILDKLIRA---- 212 usage_00295.pdb 208 NPDPHSRPSFTNILDQLTTIEES---- 230 usage_00330.pdb 188 QKERSDRPKFGQIVNMLDKLIRN---- 210 usage_00360.pdb 187 AYDPSRRPRFTELKAQLSTILEEEKL- 212 RP F l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################