################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:53 2021 # Report_file: c_0231_6.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00095.pdb # 2: usage_00161.pdb # 3: usage_00162.pdb # 4: usage_00169.pdb # 5: usage_00170.pdb # 6: usage_00171.pdb # 7: usage_00172.pdb # 8: usage_00173.pdb # 9: usage_00208.pdb # 10: usage_00209.pdb # # Length: 126 # Identity: 50/126 ( 39.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/126 ( 67.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/126 ( 20.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 -RVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKD---SQ- 55 usage_00161.pdb 1 -RIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALE------AGGDMS 53 usage_00162.pdb 1 LRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALE------AGGDMS 54 usage_00169.pdb 1 -CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALE------AGGDMS 53 usage_00170.pdb 1 -CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALE------AGGDMS 53 usage_00171.pdb 1 -CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALE------AGGDMS 53 usage_00172.pdb 1 -CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALE------AGGDMS 53 usage_00173.pdb 1 -CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALE------AGGDMS 53 usage_00208.pdb 1 -RIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALE------AGGDMS 53 usage_00209.pdb 1 -RIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALE------AGGDMS 53 iRV pD nkTLTveD GiGMTkadlvnnLGTIArSGTK FmEaLe dm usage_00095.pdb 56 LIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED--RGTEI 113 usage_00161.pdb 54 MIGQFGVGFYSAYLVADRVTVVSKNNEDDA---YTWESSAGGTFTVTSTPDL--KRGTRI 108 usage_00162.pdb 55 MIGQFGVGFYSAYLVADRVTVVSKNNEDDA---YTWESSAGGTFTVTSTPDCDLKRGTRI 111 usage_00169.pdb 54 MIGQFGVGFYSAYLVADRVTVTSKNNSDES---YVWESSAGGTFTITSTPMK---RGTRI 107 usage_00170.pdb 54 MIGQFGVGFYSAYLVADRVTVTSKNNSDES---YVWESSAGGTFTITSTPESDMKRGTRI 110 usage_00171.pdb 54 MIGQFGVGFYSAYLVADRVTVTSKNNSDES---YVWESSAGGTFTITS--MK---RGTRI 105 usage_00172.pdb 54 MIGQFGVGFYSAYLVADRVTVTSKNNSDES---YVWESSAGGTFTITSTPESDMKRGTRI 110 usage_00173.pdb 54 MIGQFGVGFYSAYLVADRVTVTSKNNSDES---YVWESSAGGTFTITSTPESDMKRGTRI 110 usage_00208.pdb 54 MIGQFGVGFYSAYLVADRVTVVSKNNEDDA---YTWESSAGGTFTVTSTPDCDLKRGTRI 110 usage_00209.pdb 54 MIGQFGVGFYSAYLVADRVTVVSKNNEDDA---YTWES---GTFTVTSTPDCDLKRGTRI 107 mIGQFGVGFYSAylVADrVTV sknn d y WES GtfT ts RGTrI usage_00095.pdb 114 TLHLRE 119 usage_00161.pdb 109 VL---- 110 usage_00162.pdb 112 VL---- 113 usage_00169.pdb 108 TL---- 109 usage_00170.pdb 111 TL---- 112 usage_00171.pdb 106 TL---- 107 usage_00172.pdb 111 TL---- 112 usage_00173.pdb 111 TL---- 112 usage_00208.pdb 111 VL---- 112 usage_00209.pdb 108 VLH--- 110 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################