################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:28 2021 # Report_file: c_0277_18.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00027.pdb # 2: usage_00035.pdb # 3: usage_00061.pdb # 4: usage_00062.pdb # 5: usage_00063.pdb # 6: usage_00064.pdb # 7: usage_00065.pdb # 8: usage_00066.pdb # 9: usage_00108.pdb # 10: usage_00109.pdb # 11: usage_00126.pdb # 12: usage_00183.pdb # 13: usage_00190.pdb # 14: usage_00213.pdb # # Length: 101 # Identity: 47/101 ( 46.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/101 ( 56.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/101 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -VQLQESGGGSVQAGGSLRLSCAASGDTFSSYSMAWFRQAPGKECELVSNILRDG-TTTY 58 usage_00035.pdb 1 EVQLVESGGGSVQPGGSLRLSCTASGYTFSQEFVIWFRQAPGKEREIVSGISLRKGWTYY 60 usage_00061.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00062.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00063.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00064.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00065.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00066.pdb 1 QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGY 60 usage_00108.pdb 1 QVQLVASGGGSVQAGGSLRLSCAAS-TFS-SYPMGWYRQAPGKECELSARIFSDG-SANY 57 usage_00109.pdb 1 QVQLVASGGGSVQAGGSLRLSCAAS-TFS-SYPMGWYRQAPGKECELSARIFSDG-SANY 57 usage_00126.pdb 1 --QLQESGGGLVQAGDSLRLSCVASGRAFSSYGMGWFRQAPGKERAFVAAISRSGGLTQY 58 usage_00183.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGRTLSSYAVGWFRQAPGLEREFVATISRSGGSTHY 60 usage_00190.pdb 1 QVQLQESGGGLVQAGGSLRLSCAASGRTSSLYSMGWFRQAPGKEREFVAAISRNGANTYY 60 usage_00213.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASRRSSRSWAMAWFRQAPGKEREFVAKISGDGRLTTY 60 L SGGG VQ GgSLRL C AS W RQAPGkE e I g Y usage_00027.pdb 59 AGSVKGRFTISRDDAKNTVYLQMVNLKSEDTARYYCAADS- 98 usage_00035.pdb 61 ADSVKGRFTISQDNAKNTVYLQMNNLKPEDTAMYYCAAAP- 100 usage_00061.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00062.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00063.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00064.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00065.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00066.pdb 61 ADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAA- 100 usage_00108.pdb 58 ADSVKGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAG-- 96 usage_00109.pdb 58 ADSVKGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAG-- 96 usage_00126.pdb 59 AESLKGRFAISRDNAKNTVYLQMGSLKPEDTAVYYCAGDL- 98 usage_00183.pdb 61 ADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAATF- 100 usage_00190.pdb 61 TDSVKGRFTISRDNAKNTVELQMNSLKPEDTAVYYCAADRF 101 usage_00213.pdb 61 GDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCAADD- 100 SvKGRFtISrD a NT LQM LKpEDTA YYCAa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################