################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:02:50 2021 # Report_file: c_0470_27.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00041.pdb # 4: usage_00042.pdb # 5: usage_00088.pdb # 6: usage_00089.pdb # 7: usage_00096.pdb # 8: usage_00100.pdb # 9: usage_00101.pdb # 10: usage_00102.pdb # 11: usage_00124.pdb # 12: usage_00168.pdb # 13: usage_00169.pdb # 14: usage_00184.pdb # 15: usage_00390.pdb # 16: usage_00391.pdb # 17: usage_00551.pdb # 18: usage_00552.pdb # # Length: 83 # Identity: 11/ 83 ( 13.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 83 ( 18.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 83 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQA--CW--PEAALVTECRALAQ--QNG 54 usage_00036.pdb 1 MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQA--CW--PEAALVTECRALAQ--QNG 54 usage_00041.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00042.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00088.pdb 1 MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQA--CW--PEAALVTECRALAQ--QNG 54 usage_00089.pdb 1 MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQA--CW--PEAALVTECRALAQ--QNG 54 usage_00096.pdb 1 -KFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFK--PIKEVIDECEEIIAKHGTG 57 usage_00100.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00101.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00102.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00124.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00168.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00169.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00184.pdb 1 LTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKA--LF--PTEETQNIAKGFAE--KSG 54 usage_00390.pdb 1 KKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDN--YKNEIDKNVLAKCIELFK--RNG 56 usage_00391.pdb 1 KKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDN--YKNEIDKNVLAKCIELFK--RNG 56 usage_00551.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 usage_00552.pdb 1 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQA--YW--PDEELVAACQAIAK--QTG 54 GD NN s A G P c G usage_00035.pdb 55 GNITLTEDVAKGVEGADFIYTD- 76 usage_00036.pdb 55 GNITLTEDVAKGVEGADFIYTD- 76 usage_00041.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00042.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00088.pdb 55 GNITLTEDVAKGVEGADFIYTDV 77 usage_00089.pdb 55 GNITLTEDVAKGVEGADFIYTDV 77 usage_00096.pdb 58 GSIKIFHDCKKGCEGVDVVYTD- 79 usage_00100.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00101.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00102.pdb 55 GKITLTENVAEGVQGCDFLYTD- 76 usage_00124.pdb 55 GKITLTENVAEGVQGCDFLYTD- 76 usage_00168.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00169.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00184.pdb 55 AKLVITDDLDEGLKGSNVVYTDV 77 usage_00390.pdb 57 GSLRFSTDKILAAQDADVIYTD- 78 usage_00391.pdb 57 GSLRFSTDKILAAQDADVIYTD- 78 usage_00551.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 usage_00552.pdb 55 GKITLTENVAEGVQGCDFLYTDV 77 g d YTD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################