################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:39 2021 # Report_file: c_0461_58.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00421.pdb # 2: usage_00422.pdb # 3: usage_00663.pdb # 4: usage_00664.pdb # 5: usage_00665.pdb # 6: usage_00666.pdb # 7: usage_00667.pdb # # Length: 101 # Identity: 43/101 ( 42.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/101 ( 43.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/101 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00421.pdb 1 -AKVILYARVSS--NTKDDLANQVKYLEEQVK---EYDLVITDIGSGLN-KRKGFLKLLR 53 usage_00422.pdb 1 -AKVILYARVSS--NT-DDLANQVKYLEEQVK---EYDLVITDIGSGLN-KRKGFLKLLR 52 usage_00663.pdb 1 KRKVILYARVSSSTQ-KDDLVNQVKYLEEQVK---EYDQVITDIGSGLNMKRKGFLKLLR 56 usage_00664.pdb 1 ---IIGYARVSFNAQ-KDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLK 56 usage_00665.pdb 1 -AKIIGYARVSFNAQ-KDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLK 58 usage_00666.pdb 1 --KIIGYARVSFNAQ-KDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLK 57 usage_00667.pdb 1 -AKIIGYARVSFNAQ-KDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLK 58 I YARVS DDL Q DIGSGLN KRK KLL usage_00421.pdb 54 -ILNNEVSRVITAYPDRLVRFGFEILEEVCKAHNCEIVV-- 91 usage_00422.pdb 53 -ILNNEVSRVITAYPDRLVRFGFEILEEVCKAHNCEIVV-- 90 usage_00663.pdb 57 MILNNEVSRVVVAYPDRLVRFGFEILEEVCKAHGCEIVV-- 95 usage_00664.pdb 57 -V-NRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIIN 95 usage_00665.pdb 59 -V-NRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVI-- 95 usage_00666.pdb 58 -V-NRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVI-- 94 usage_00667.pdb 59 -V-NRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVI-- 95 N V Vi AYPDRL RFGFE L E K EIV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################