################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:00:21 2021 # Report_file: c_0739_9.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00062.pdb # 2: usage_00102.pdb # 3: usage_00194.pdb # 4: usage_00195.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # 7: usage_00198.pdb # 8: usage_00199.pdb # 9: usage_00222.pdb # 10: usage_00224.pdb # 11: usage_00245.pdb # 12: usage_00246.pdb # 13: usage_00247.pdb # 14: usage_00248.pdb # 15: usage_00249.pdb # 16: usage_00255.pdb # 17: usage_00271.pdb # 18: usage_00272.pdb # # Length: 96 # Identity: 5/ 96 ( 5.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 96 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 96 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 -LEIKFRLTDGSD--IGPKAF--PDATTVSALKETVISEW--PREKENGPKTVKEVKLIS 53 usage_00102.pdb 1 --TLLVKSPN-QR--HRDLELSGDRGWSVGHLKAHLSRVYPER-------PRPEDQRLIY 48 usage_00194.pdb 1 ---IKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 43 usage_00195.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00196.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00197.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00198.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00199.pdb 1 ---IKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 43 usage_00222.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00224.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00245.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00246.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00247.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00248.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00249.pdb 1 SMWIQVRTMD-GRQTHTVDSL--SRLTKVEELRRKIQELF--H-------VEPGLQRLFY 48 usage_00255.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00271.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 usage_00272.pdb 1 -MLIKVKTLT-GK--EIEIDI--EPTDKVERIKERVEEKE--G-------IPPQQQRLIY 45 i v V k p qrLiy usage_00062.pdb 54 AGKVLENSKTVKDYRSPVSNLAGAVTTMHVII---- 85 usage_00102.pdb 49 SGKLLLDHQCLRDLLPKQ---E-KRHVLHLVCNVK- 79 usage_00194.pdb 44 SGKQMNDEKTAADYK-I----L-GGSVLHLVL--RL 71 usage_00195.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00196.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00197.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHLVL--RL 73 usage_00198.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00199.pdb 44 SGKQMNDEKTAADYK-I----L-GGSVLHLVL--RL 71 usage_00222.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHLVL--A- 72 usage_00224.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHLV----- 70 usage_00245.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00246.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00247.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00248.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00249.pdb 49 RGKQMEDGHTLFDYE-V----R-LNDTIQLL----- 73 usage_00255.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHLV----- 70 usage_00271.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHL------ 69 usage_00272.pdb 46 SGKQMNDEKTAADYK-I----L-GGSVLHLVL--QL 73 GK d t Dy hl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################