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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:00:11 2021
# Report_file: c_1484_231.html
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#====================================
# Aligned_structures: 4
#   1: usage_00096.pdb
#   2: usage_00097.pdb
#   3: usage_03452.pdb
#   4: usage_03453.pdb
#
# Length:         94
# Identity:       53/ 94 ( 56.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/ 94 ( 56.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/ 94 ( 39.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00096.pdb         1  ----DPHAMRDMAGRFEVHAQTVEDEARRMWASAQ---------------LDTMAQMNQA   41
usage_00097.pdb         1  -----PHAMRDMAGRFEVHAQTVEDEARRMWASAQ--------ATS----LDTMAQMNQA   43
usage_03452.pdb         1  -PHA------RDAGRFEVHAQTVEDEARRW-ASAQNISSGAEA-TSLDTA------QNQA   45
usage_03453.pdb         1  DPHA------RDAGRFEVHAQTVEDEARRW-ASAQ-----------T--A------QNQA   34
                                       AGRFEVHAQTVEDEARR  ASAQ                      NQA

usage_00096.pdb        42  FRNIVNMLHGVRDGLVRDANNYEQQEQASQ----   71
usage_00097.pdb        44  FRNIVNMLHGVRDGLVRDANNYEQQEQASQQ---   74
usage_03452.pdb        46  FRNIVN-LHGVRDGLVRDANNYEQQEQASQQILS   78
usage_03453.pdb        35  FRNIVN-LHGVRDGLVRDANNYEQQEQASQQILS   67
                           FRNIVN LHGVRDGLVRDANNYEQQEQASQ    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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