################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:05:24 2021 # Report_file: c_1089_51.html ################################################################################################ #==================================== # Aligned_structures: 43 # 1: usage_00027.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00031.pdb # 6: usage_00047.pdb # 7: usage_00048.pdb # 8: usage_00049.pdb # 9: usage_00050.pdb # 10: usage_00051.pdb # 11: usage_00052.pdb # 12: usage_00083.pdb # 13: usage_00132.pdb # 14: usage_00133.pdb # 15: usage_00205.pdb # 16: usage_00206.pdb # 17: usage_00207.pdb # 18: usage_00208.pdb # 19: usage_00266.pdb # 20: usage_00267.pdb # 21: usage_00294.pdb # 22: usage_00317.pdb # 23: usage_00318.pdb # 24: usage_00319.pdb # 25: usage_00320.pdb # 26: usage_00353.pdb # 27: usage_00385.pdb # 28: usage_00386.pdb # 29: usage_00387.pdb # 30: usage_00388.pdb # 31: usage_00390.pdb # 32: usage_00391.pdb # 33: usage_00400.pdb # 34: usage_00429.pdb # 35: usage_01111.pdb # 36: usage_01112.pdb # 37: usage_01427.pdb # 38: usage_01532.pdb # 39: usage_01535.pdb # 40: usage_01538.pdb # 41: usage_01588.pdb # 42: usage_01589.pdb # 43: usage_01818.pdb # # Length: 92 # Identity: 33/ 92 ( 35.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 92 ( 35.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/ 92 ( 63.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -----GEMTQLLNSLCTAVKAIHRAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00028.pdb 1 -------MTQLLNSLCTAVKAIHRAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 45 usage_00029.pdb 1 ------EMTQLLNSLCTAVKAISTAVRK--AGIAHLYG--IAG-S-TNVTG--DQVKKLD 46 usage_00030.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00031.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00047.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00048.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00049.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00050.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00051.pdb 1 TNVTG------------------------------------------------DQVKKLD 12 usage_00052.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00083.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00132.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGI--------------------DQVKKLD 33 usage_00133.pdb 1 --------TQLLNSLCTAVKAISTAVRK--AGI--------------------DQVKKLD 30 usage_00205.pdb 1 ------EMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 46 usage_00206.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00207.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00208.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00266.pdb 1 ------EMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 46 usage_00267.pdb 1 ------EMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 46 usage_00294.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00317.pdb 1 ------EMTQLLNSLCTAVKAISTAVRK--AGIA-----------------H-DQVKKLD 34 usage_00318.pdb 1 ------EMTQLLNSLCTAVKAISTAVRK--AGIA-----------------H-DQVKKLD 34 usage_00319.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGI-------------------ADQVKKLD 34 usage_00320.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGI-------------------ADQVKKLD 34 usage_00353.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLW--G--IAG-S-----------KKLD 39 usage_00385.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00386.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00387.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-AT---------VKKLD 41 usage_00388.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-AT---------VKKLD 41 usage_00390.pdb 1 -----GEMTQLLNSLCTAVAAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00391.pdb 1 -----GEMTQLLNSLCTAVAAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_00400.pdb 1 ------EMTQLLNSLCTAVKAISTAVRK--AGIAHLYG--IAG-S-TNVTG--DQVKKLD 46 usage_00429.pdb 1 ------EMTQLLNSLCTAVKAISTAVRK--AGI-------------------ADQVKKLD 33 usage_01111.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGILH--LYGIAG-S-TNVTG--DQVKKLD 47 usage_01112.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGILHLYG--IAG-S-TNVTG--DQVKKLD 47 usage_01427.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAGS-------------KLD 38 usage_01532.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGIAHLYG--IAG-S-TNVTG--DQVKKLD 47 usage_01535.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-----------KKLD 39 usage_01538.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGIAHLYG--IAG-S-TNVTG--DQVKKLD 47 usage_01588.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_01589.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRKAGIAHLY--G--IAG-S-TNVTG--DQVKKLD 47 usage_01818.pdb 1 -----GEMTQLLNSLCTAVKAISTAVRK--AGILHLYG--IAG-S-TNVTG--DQVKKLD 47 KLD usage_00027.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00028.pdb 46 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 77 usage_00029.pdb 47 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 78 usage_00030.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00031.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00047.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00048.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00049.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00050.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00051.pdb 13 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 44 usage_00052.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00083.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00132.pdb 34 VLSNDLVINVLKSSFATCVLVTEEDKNAIIV- 64 usage_00133.pdb 31 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 62 usage_00205.pdb 47 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 78 usage_00206.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00207.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00208.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00266.pdb 47 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 78 usage_00267.pdb 47 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 78 usage_00294.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_00317.pdb 35 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 66 usage_00318.pdb 35 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 66 usage_00319.pdb 35 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 66 usage_00320.pdb 35 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 66 usage_00353.pdb 40 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 71 usage_00385.pdb 48 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 79 usage_00386.pdb 48 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 79 usage_00387.pdb 42 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 73 usage_00388.pdb 42 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 73 usage_00390.pdb 48 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 79 usage_00391.pdb 48 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 79 usage_00400.pdb 47 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 78 usage_00429.pdb 34 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 65 usage_01111.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01112.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01427.pdb 39 VLSNDLVINVLKSSFATCVLVTEEDKNAIIVE 70 usage_01532.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01535.pdb 40 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 71 usage_01538.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01588.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01589.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 usage_01818.pdb 48 VLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 79 VLSNDLVINVLKSSFATCVLV EEDKNAIIV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################