################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:22 2021 # Report_file: c_0823_6.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00005.pdb # 4: usage_00024.pdb # 5: usage_00025.pdb # 6: usage_00026.pdb # 7: usage_00028.pdb # # Length: 74 # Identity: 2/ 74 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 74 ( 16.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 74 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 DDCVQKFNELKLGH-QHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQL---P-E-RDC 54 usage_00002.pdb 1 DDCVQKFNELKLGH-QHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQL---P-E-RDC 54 usage_00005.pdb 1 -DCKLRFLELKAKR-THRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL---P-A-DEC 53 usage_00024.pdb 1 ESVRGAIDDLR-MK-KSRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKF---S-T-EKP 53 usage_00025.pdb 1 PSCKNAYDLLHNKH-QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKEC 59 usage_00026.pdb 1 -NCVARFNELK-IRKTVKWIVFKIE--NTKIVVEKDGK--GNADEFRGAL---P-A-NDC 49 usage_00028.pdb 1 DVCKTTYEEIKKDK-KHRYVIFYIR-DEKQIDVETVADRNAEYDQFLEDIQKCG-P-GEC 56 c l Ve vg y f c usage_00001.pdb 55 RYAIFDYEFQ---- 64 usage_00002.pdb 55 RYAIFDYEFQ---- 64 usage_00005.pdb 54 RYAIYDFDFV---- 63 usage_00024.pdb 54 CYVAFDFEYN---- 63 usage_00025.pdb 60 RYAAVD-------- 65 usage_00026.pdb 50 RFGVYD-------- 55 usage_00028.pdb 57 RYGLFDFEYMHQCQ 70 ry D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################