################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:51 2021 # Report_file: c_1269_36.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00342.pdb # 2: usage_00343.pdb # 3: usage_00469.pdb # 4: usage_00470.pdb # 5: usage_00471.pdb # 6: usage_00472.pdb # 7: usage_00473.pdb # 8: usage_00474.pdb # 9: usage_00475.pdb # 10: usage_00476.pdb # 11: usage_00477.pdb # 12: usage_00478.pdb # 13: usage_00479.pdb # 14: usage_00545.pdb # 15: usage_00546.pdb # 16: usage_00547.pdb # 17: usage_00548.pdb # 18: usage_00549.pdb # 19: usage_00550.pdb # 20: usage_00551.pdb # 21: usage_00727.pdb # 22: usage_00858.pdb # 23: usage_00974.pdb # 24: usage_01227.pdb # 25: usage_01300.pdb # 26: usage_01301.pdb # 27: usage_01302.pdb # 28: usage_01303.pdb # # Length: 46 # Identity: 17/ 46 ( 37.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 46 ( 54.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 46 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQS- 45 usage_00343.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQS- 45 usage_00469.pdb 1 KVVLAYEPVW--------TPQQAQEVHEKLRGWLKSHVSDAVAQ-- 36 usage_00470.pdb 1 KVVLAYEPVWAIGTGYSLTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00471.pdb 1 KVVLAYEPVWAIGTGYSLTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00472.pdb 1 KVVLAYEPVWAIGTGNPNTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00473.pdb 1 KVVLAYEPVWAIGTGNPNTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00474.pdb 1 KVVLAYEPVWAIGTGLWATPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00475.pdb 1 KVVLAYEPVWAIGTGLWATPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00476.pdb 1 KVVLAYEPVWAIGTGKVATPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00477.pdb 1 KVVLAYEPVWAIGTGKVATPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00478.pdb 1 KVVLAYEPVWAIGTGNSSTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00479.pdb 1 KVVLAYEPVWAIGTGNSSTPQQAQEVHEKLRGWLKSHVSDAVAQS- 45 usage_00545.pdb 1 KVVLAYDPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00546.pdb 1 KVVLAYDPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00547.pdb 1 KVVLAYDPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00548.pdb 1 KVVLAYDPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00549.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00550.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00551.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_00727.pdb 1 --VLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQS- 43 usage_00858.pdb 1 --VIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVAD-- 42 usage_00974.pdb 1 --VLAYEPVWAIGTGKTASPEQAQEVHADLRQWLRDNVNAEVAES- 43 usage_01227.pdb 1 --VLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQST 44 usage_01300.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_01301.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_01302.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQS- 45 usage_01303.pdb 1 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQ-- 44 VlAY PVW p QAQEVHe lR wLk Vs aVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################