################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:35 2021 # Report_file: c_1052_35.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00065.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00068.pdb # 5: usage_00099.pdb # 6: usage_00428.pdb # # Length: 73 # Identity: 4/ 73 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 73 ( 45.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 73 ( 52.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00065.pdb 1 -PVLVHCAAGVNRSGAI-LAYL-SKNKESL---PLYFLYVYHS-RDLRGAF----VENPS 49 usage_00066.pdb 1 -PVLVHCAAGVNRSGAI-LAYL-SKNKESL---PLYFLYVYHS-RDLRGAF----VENPS 49 usage_00067.pdb 1 -PVLVHCAAGVNRSGAI-LAYL-SKNKESL---PLYFLYVYHS-RDLRGAF----VENPS 49 usage_00068.pdb 1 -PVLVHCAAGVNRSGAI-LAYL-SKNKESL---PLYFLYVYHS-RDLRGAF----VENPS 49 usage_00099.pdb 1 DVLVHCLA---NYR----------------AS-AFAYLYQLKQ-G------QNPNAQTTP 33 usage_00428.pdb 1 -PVLVHSAAGVNRSGAMILAYLMSKNKESL--PMLYFLYVYHSMRDLRGAF----VENPS 53 pvlvh A Nrs lyfLYvyhs r venps usage_00065.pdb 50 FKRQIIEKYVID- 61 usage_00066.pdb 50 FKRQIIEKYV--- 59 usage_00067.pdb 50 FKRQIIEKYVIDK 62 usage_00068.pdb 50 FKRQIIEKYV--- 59 usage_00099.pdb 34 WNDELAIYP---- 42 usage_00428.pdb 54 FKRQIIEKYV--- 63 fkrqiieky #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################