################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:06 2021 # Report_file: c_1095_22.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00084.pdb # 2: usage_00160.pdb # 3: usage_00161.pdb # 4: usage_00162.pdb # 5: usage_00216.pdb # 6: usage_00217.pdb # 7: usage_00303.pdb # 8: usage_00304.pdb # 9: usage_00305.pdb # 10: usage_00388.pdb # 11: usage_00543.pdb # # Length: 85 # Identity: 7/ 85 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 85 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 85 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 -VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP-ADKFSAEFVDFTSQ 58 usage_00160.pdb 1 --KVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 54 usage_00161.pdb 1 ----DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 52 usage_00162.pdb 1 --KVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 54 usage_00216.pdb 1 NEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKIREG-KFRR-IPYRYSDELNEIITR 57 usage_00217.pdb 1 NEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKIREG-KFRR-IPYRYSDELNEIITR 57 usage_00303.pdb 1 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 56 usage_00304.pdb 1 ---VDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 53 usage_00305.pdb 1 ---VDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRV-EFTF--PDFVTEGARDLISR 53 usage_00388.pdb 1 --KVDLWCIGVLCYELLVGNPPFESAS-HNETYRRIVKV-DLKF--PASVPTGAQDLISK 54 usage_00543.pdb 1 --KVDLWSLGVLCYEFLVGMPPFEAHT-YQETYRRISRV-EFTF--PDFVTEGARDLISR 54 D WslG l yE pPf e i p i usage_00084.pdb 59 CLKKNSKERPTYPELMQH------- 76 usage_00160.pdb 55 LLKHNPSQRPMLREVLEH------- 72 usage_00161.pdb 53 LLKHNPSQRPMLREVLEH------- 70 usage_00162.pdb 55 LLKHNPSQRPMLREVLEHPWITANS 79 usage_00216.pdb 58 MLNLKDYHRPSVEEILEN------- 75 usage_00217.pdb 58 MLNLKDYHRPSVEEILE-------- 74 usage_00303.pdb 57 LLKHNPSQRPMLREVLEH------- 74 usage_00304.pdb 54 LLKHNPSQRPMLREVLEH------- 71 usage_00305.pdb 54 LLKHNPSQRPMLREVLEH------- 71 usage_00388.pdb 55 LLRHNPSERLPLAQVSAH------- 72 usage_00543.pdb 55 LLKHNASQRLTLAEVLE-------- 71 L R e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################