################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:18 2021 # Report_file: c_1488_302.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00528.pdb # 2: usage_00529.pdb # 3: usage_00531.pdb # 4: usage_00532.pdb # 5: usage_00533.pdb # 6: usage_00876.pdb # 7: usage_03016.pdb # 8: usage_03207.pdb # 9: usage_04058.pdb # 10: usage_04059.pdb # 11: usage_04060.pdb # 12: usage_04835.pdb # 13: usage_04998.pdb # 14: usage_04999.pdb # 15: usage_05288.pdb # 16: usage_05715.pdb # 17: usage_05864.pdb # 18: usage_06310.pdb # 19: usage_06311.pdb # 20: usage_06576.pdb # 21: usage_06741.pdb # 22: usage_06915.pdb # 23: usage_06916.pdb # 24: usage_07513.pdb # # Length: 28 # Identity: 0/ 28 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 28 ( 14.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 28 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00528.pdb 1 -PMDLKNAVAEELIKILEPIRKRLL--- 24 usage_00529.pdb 1 --MDLKNAVAEELIKILEPIRKRL---- 22 usage_00531.pdb 1 -PMDLKNAVAEELIKILEPIRKRL---- 23 usage_00532.pdb 1 -PMDLKNAVAEELIKILEPIRKRL---- 23 usage_00533.pdb 1 HPMDLKNAVAEELIKILEPIRKRLA--- 25 usage_00876.pdb 1 HPMDLKNAVAEELIKILEPIRKRL---- 24 usage_03016.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_03207.pdb 1 -PMDLKNAVAEELIKILEPIRKRL---- 23 usage_04058.pdb 1 --MDLKNAVAEELIKILEPIRKRL---- 22 usage_04059.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_04060.pdb 1 --MDLKNAVAEELIKILEPIRKRLLE-- 24 usage_04835.pdb 1 --MYLKNAVAEELIKILEPIRKRLL--- 23 usage_04998.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_04999.pdb 1 HPMDLKNAVAEELIKILEPIRKRLLEHH 28 usage_05288.pdb 1 --MDLKNAVAEELIKILEPIRKRLL--- 23 usage_05715.pdb 1 TSLLIVVGVALETMKQLESQLVKRHY-- 26 usage_05864.pdb 1 HPMDLKNAVAEELIKILEPIRKRL---- 24 usage_06310.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_06311.pdb 1 --MDLKNAVAEELIKILEPIRKRLL--- 23 usage_06576.pdb 1 -QPQYLIDQVLPLLRNTANELRNLV--- 24 usage_06741.pdb 1 --------DLGELISEFEVLLRRLL--- 17 usage_06915.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_06916.pdb 1 HPMDLKNAVAEELIKILEPIRKRLL--- 25 usage_07513.pdb 1 --MDLKNAVAEELIKILEPIRKRLAAH- 25 el e l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################