################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:56 2021 # Report_file: c_1364_6.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00011.pdb # 2: usage_00012.pdb # 3: usage_00032.pdb # 4: usage_00191.pdb # 5: usage_00301.pdb # 6: usage_00304.pdb # 7: usage_00305.pdb # 8: usage_00409.pdb # 9: usage_00433.pdb # 10: usage_00443.pdb # 11: usage_00455.pdb # 12: usage_00618.pdb # 13: usage_00619.pdb # 14: usage_00725.pdb # 15: usage_00772.pdb # 16: usage_00895.pdb # 17: usage_00915.pdb # # Length: 66 # Identity: 28/ 66 ( 42.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 66 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 66 ( 27.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00012.pdb 1 -NQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 57 usage_00032.pdb 1 -NQEVCEIARRRILMWHKKNGAPP----GK--GIDPACQAAADYLSMLALQKGSKDNISI 53 usage_00191.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00301.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00304.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00305.pdb 1 NNQEVCEIARRRILMWHKKNG--PLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 56 usage_00409.pdb 1 NNQEVCEIARRRILMWHKKN-------RGK--GIDPACQAAADYLSMLALQKGSKDNISI 51 usage_00433.pdb 1 TDEEACEMARKRILLW----------------GKDPAAMSAAEYLSKLAIQRGSKDNISV 44 usage_00443.pdb 1 SNEEVCDVARKRILLWHKKN----------G-SSDPAAEAAAECLSKLALQKGSKDNISV 49 usage_00455.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00618.pdb 1 NNQEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 58 usage_00619.pdb 1 TNEEVCDLARKRILLWHKKN-----------EGKDPAAMSAAEYLSKMALQKGSKDNISV 49 usage_00725.pdb 1 --QEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 56 usage_00772.pdb 1 --QEVCEIARRRILMWHKKNGAPPLAERGK--GIDPACQAAADYLSMLALQKGSKDNISI 56 usage_00895.pdb 1 -DEEACEMARKRILLWHKKNA----------EGKDPAAMSAAEYLSKLAIQRGSKDNISV 49 usage_00915.pdb 1 -NQEVCEIARRRILMWHKKNGAP----RGK--GIDPACQAAADYLSMLALQKGSKDNISI 53 E C AR RIL W g DPA AA yLS lA Q GSKDNIS usage_00011.pdb 59 IVIDLK 64 usage_00012.pdb 58 IVIDLK 63 usage_00032.pdb 54 IVIDLK 59 usage_00191.pdb 59 IVIDLK 64 usage_00301.pdb 59 IVIDLK 64 usage_00304.pdb 59 IVIDLK 64 usage_00305.pdb 57 IVIDLK 62 usage_00409.pdb 52 IVIDLK 57 usage_00433.pdb 45 VVVDLK 50 usage_00443.pdb 50 IVVDLK 55 usage_00455.pdb 59 IVIDLK 64 usage_00618.pdb 59 IVIDLK 64 usage_00619.pdb 50 VVVDLK 55 usage_00725.pdb 57 IVIDLK 62 usage_00772.pdb 57 IVIDLK 62 usage_00895.pdb 50 VVVDLK 55 usage_00915.pdb 54 IVIDLK 59 V DLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################