################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:52:18 2021 # Report_file: c_1001_37.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00066.pdb # 2: usage_00469.pdb # 3: usage_00470.pdb # 4: usage_00471.pdb # 5: usage_00476.pdb # 6: usage_00521.pdb # 7: usage_00522.pdb # 8: usage_00523.pdb # 9: usage_00524.pdb # 10: usage_00525.pdb # 11: usage_00715.pdb # 12: usage_00716.pdb # # Length: 60 # Identity: 1/ 60 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 60 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 60 ( 55.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 RVVRDRNRITGAGV-----------------TAGLDFGLS-VAELR-DQTYAECAQLS-- 39 usage_00469.pdb 1 SIADEP-HFVVMGGTTEPIANALKESYAENASLTDALRIAVAALRAG------------- 46 usage_00470.pdb 1 RWVKDGNIYTSSGV-----------------SAGIDMTLGFIEDLI-GKEKALEISRSIE 42 usage_00471.pdb 1 RWVKDGNIYTSSGV-----------------SAGIDMTLGFIEDLI-GKEKALEISRSIE 42 usage_00476.pdb 1 PLVIEGNIATAGGC-----------------LSLLYLVGWLAERLF-DSVKRKQIQNQLI 42 usage_00521.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00522.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00523.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00524.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00525.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00715.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 usage_00716.pdb 1 RVVRDGNLLTGGGI-----------------TAGIDFALTLAAELF-DAATAQRVQLQLE 42 v t G l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################