################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:19:57 2021 # Report_file: c_0116_9.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00017.pdb # 2: usage_00045.pdb # 3: usage_00047.pdb # 4: usage_00048.pdb # 5: usage_00049.pdb # 6: usage_00059.pdb # 7: usage_00064.pdb # 8: usage_00071.pdb # 9: usage_00072.pdb # 10: usage_00097.pdb # 11: usage_00118.pdb # 12: usage_00182.pdb # 13: usage_00184.pdb # 14: usage_00191.pdb # 15: usage_00192.pdb # # Length: 109 # Identity: 50/109 ( 45.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 68/109 ( 62.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/109 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -IQMTQSPSSLSASLGDRVTISCSASQDINKYLNWYQQKPDGAVKLLIFYTSSLHSGVPS 59 usage_00045.pdb 1 DIQMTQSTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKVLIYYTSRLRSGVPS 60 usage_00047.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK 59 usage_00048.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK 59 usage_00049.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK 59 usage_00059.pdb 1 -IQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVPK 59 usage_00064.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVTS 60 usage_00071.pdb 1 DIQMTQSTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKVLIYYTSRLRSGVPS 60 usage_00072.pdb 1 -IQMTQSTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKVLIYYTSRLRSGVPS 59 usage_00097.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00118.pdb 1 DIVMTQSSSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVELLIYYTSRLQSGVPS 60 usage_00182.pdb 1 --QMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSSVPK 58 usage_00184.pdb 1 DIQMTQTTSSLSASLGDRVTISCRESQDISNSLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 usage_00191.pdb 1 -IQMTQTTSSLSASLGDRVTIICRASQDINNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS 59 usage_00192.pdb 1 DIQMTQTTSSLSASLGDRVTISCRASQDISNFLNWYQQKPDGTVKLLIYYTSRLHSGVPS 60 qMTQ SSLSASLG RV CraSQ I L W QQKPDGt k LIy S L SgVp usage_00017.pdb 60 RFSGSGSGTDYSLTISNLEPEDIATYYCQQYEKLPWTFGGGTKLEV--- 105 usage_00045.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIKRA 109 usage_00047.pdb 60 RFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00048.pdb 60 RFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00049.pdb 60 RFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEI--- 105 usage_00059.pdb 60 RFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRT 108 usage_00064.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKVEI--- 106 usage_00071.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIKRA 109 usage_00072.pdb 60 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEI--- 105 usage_00097.pdb 61 RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI--- 106 usage_00118.pdb 61 RFSGSGSGSDYSLTISNLVPEDIATYYCQQYSKLFTFGSGTKLEI---- 105 usage_00182.pdb 59 RFSGSRSGSDYSLTIS-LDSEDFAVYYCLQYASYPYTFGGGTKVEI--- 103 usage_00184.pdb 61 RFSGSGTGTDYSLTISNLEQEDFATYFCQQGNTLPYTFGGGTKLEI--- 106 usage_00191.pdb 60 RFSGSGSGSDYSLTISNLEQEDIATYFCQQANTLPPTFGAGTKLELRRA 108 usage_00192.pdb 61 RFSGSGSGTDFSLTISKLEQEDIATYFCQQGNTLPLTFGAGTKLEL--- 106 RFSGS sG DySLTIS L ED A Y C Q p tfg gtk e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################