################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:00 2021 # Report_file: c_1191_106.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00136.pdb # 2: usage_00821.pdb # 3: usage_01066.pdb # 4: usage_01290.pdb # 5: usage_01980.pdb # 6: usage_02078.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 50 ( 14.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 50 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 GAVTVAWKADSSPVK----AGVETTTPS-KQ-S---N-NKYAASSYLSL- 39 usage_00821.pdb 1 GAVTVAWKADSSPVK----AGVETTTPS-KQ-S---N-NKYAASSYLS-- 38 usage_01066.pdb 1 GAVTVAWKADSSPVK----AGVETTTPS-KQ-S---N-NKYAASSYLSLT 40 usage_01290.pdb 1 -HVELSWWVNGKEVH----SGVSTDPQPLKE-QPALNDSRYALSSRLRVS 44 usage_01980.pdb 1 --INVKWKIDGSERQ----NGVLNSWTD-QDSK---D-STYSMSSTLTLT 39 usage_02078.pdb 1 HLSIYSDYETVT---DTPDLLSIRRNIE-TT-Q---ASSYTQSRYITID- 41 w gv y ss l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################