################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:27 2021 # Report_file: c_1490_157.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00497.pdb # 2: usage_00499.pdb # 3: usage_00514.pdb # 4: usage_00515.pdb # 5: usage_00922.pdb # 6: usage_01071.pdb # # Length: 58 # Identity: 1/ 58 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 58 ( 19.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 58 ( 65.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00497.pdb 1 ----SDLREYVKARLKVFY------PLVL------------FNEVLDHILRIDRVFR- 35 usage_00499.pdb 1 ----SDLREYVKARLKVFYEEELDVPLVL------------FNEVLDHILRIDRVFR- 41 usage_00514.pdb 1 --NRSDLREYVKARLKVFYEEELDVPLVL------------FNEVLDHILRIDRVF-- 42 usage_00515.pdb 1 ---RSDLREYVKARLKVFYEEELDVPLVL------------FNEVLDHILRIDRVFRQ 43 usage_00922.pdb 1 KRELKQLLEKA------------------PIPIREDIDDPLAKVNVLLQSYFSQ---- 36 usage_01071.pdb 1 --NSTDLKDVIKKGLIHYGRDNQNLDILL------------FHEVLEYMSRIDRVLSF 44 dL e f evl ridr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################