################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:06 2021 # Report_file: c_1009_24.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00011.pdb # 2: usage_00028.pdb # 3: usage_00092.pdb # 4: usage_00095.pdb # 5: usage_00146.pdb # 6: usage_00159.pdb # 7: usage_00203.pdb # 8: usage_00219.pdb # 9: usage_00257.pdb # 10: usage_00276.pdb # 11: usage_00277.pdb # 12: usage_00293.pdb # 13: usage_00332.pdb # 14: usage_00371.pdb # # Length: 80 # Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 80 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 80 ( 58.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 EKINVAVK-TCKK-D-------CTLDNKEKFMSEAVIMKNLDHPHIVKLIG--------- 42 usage_00028.pdb 1 ----LNFLTYA-------------------DEYAIGYFKKQG-----FSKEIKIPKTKYV 32 usage_00092.pdb 1 ----VAVK-TLKD---------TM--EVEEFLKEAAVMKEIKHPNLVQLLG--------- 35 usage_00095.pdb 1 ----VAVK-TL--------------MEVEEFLKEAAVMKEIKHPNLVQLLG--------- 32 usage_00146.pdb 1 ----VAVK-TLKED--------T--MEVEEFLKEAAVMKEIKHPNLVQLLG--------- 36 usage_00159.pdb 1 ----IVVK-VLKVRD-------WSTRKSRDFNEECPRLRIFSHPNVLPVLG--------- 39 usage_00203.pdb 1 I-L-VAVK-TLKD---------ASDNARKDFHREAELLTNLQHEHIVKFYG--------- 39 usage_00219.pdb 1 ----VAVK-TL----------------VEEFLKEAAVMKEIKHPNLVQLLG--------- 30 usage_00257.pdb 1 ----VAVK-TL---------------EVEEFLKEAAVMKEIKHPNLVQLLG--------- 31 usage_00276.pdb 1 ----MVMK-ELIR---------FDEETQRTFLKEVKVMRCLEHPNVLKFIG--------- 37 usage_00277.pdb 1 ----MVMK-ELIR---------FDEETQRTFLKEVKVMRCLEHPNVLKFIG--------- 37 usage_00293.pdb 1 ----VAIK-SLILGDSEGETEM--IEKFQEFQREVFIMSNLNHPNIVKLYG--------- 44 usage_00332.pdb 1 ----VAVK-TLKED--------T--MEVEEFLKEAAVMKEIKHPNLVQLLG--------- 36 usage_00371.pdb 1 ----VAVK-TLK--------------EVEEFLKEAAVMKEIKHPNLVQLLG--------- 32 k f e g usage_00011.pdb 43 --IIEE---EPTWIIMELYP 57 usage_00028.pdb 33 GYIKDY-E-GATLMGCE--- 47 usage_00092.pdb 36 --VCTR-E-PPFYIITE--- 48 usage_00095.pdb 33 --VCTR-E-PPFYIITE--- 45 usage_00146.pdb 37 --VCTR-E-PPFYIITE--- 49 usage_00159.pdb 40 --ACQSPPAPHPTLITH--- 54 usage_00203.pdb 40 --VCVE-G-DPLIMVFE--- 52 usage_00219.pdb 31 --VCTR-E-PPFYIITE--- 43 usage_00257.pdb 32 --VCTR-E-PPFYIIIE--- 44 usage_00276.pdb 38 --VLYK-D-KRLNFITE--- 50 usage_00277.pdb 38 --VLYK-D-KRLNFITE--- 50 usage_00293.pdb 45 --LMH----NPPRMVME--- 55 usage_00332.pdb 37 --VCTR-E-PPFYIIIE--- 49 usage_00371.pdb 33 --VCTR-E-PPFYIIIE--- 45 e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################