################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:30 2021 # Report_file: c_0777_145.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00335.pdb # 2: usage_00580.pdb # 3: usage_00783.pdb # 4: usage_00784.pdb # 5: usage_01571.pdb # # Length: 77 # Identity: 2/ 77 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 77 ( 11.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 77 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00335.pdb 1 -KISIVGAGSVRF-ALQLVEDIAQTD-ELSR----EDTHIYLMDV--HERRLNASYILAR 51 usage_00580.pdb 1 -RIAVIGGGS-SY-TPELVKGLLDIS-----EDVRI-DEVIFYDI--DEEKQKIVVDFK- 48 usage_00783.pdb 1 LKMATIGGGS-SY-TPELVEGLIKRY-----HELPV-GELWLVDIPEGKEKLEIVGALAK 52 usage_00784.pdb 1 LKMATIGGGS-SY-TPELVEGLIKRY-----HELPV-GELWLVDIPEGKEKLEIVGALAK 52 usage_01571.pdb 1 LEMEIISCG---NVTDKGIIALH-HFR-------NL-KYLFLSDLPGVK-----EKEKIV 43 ig G t lv l l D usage_00335.pdb 52 KYVEEL-NSPVKVVKTE 67 usage_00580.pdb 49 ------RLVRFKVLISD 59 usage_00783.pdb 53 RMVEKA-GVPIEIHL-- 66 usage_00784.pdb 53 RMVEKA-GVPIEIHL-- 66 usage_01571.pdb 44 QAFKTS-LPSLELKLD- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################