################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:36 2021 # Report_file: c_0400_17.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00167.pdb # 2: usage_00168.pdb # 3: usage_00169.pdb # 4: usage_00184.pdb # 5: usage_00187.pdb # 6: usage_00188.pdb # 7: usage_00189.pdb # 8: usage_00214.pdb # 9: usage_00215.pdb # # Length: 99 # Identity: 59/ 99 ( 59.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 99 ( 65.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 99 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00167.pdb 1 -K-SCTIR-----V-KEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 52 usage_00168.pdb 1 KS-CTIRV-----N-KEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 53 usage_00169.pdb 1 -KSCTIRVNGNGI--KEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 57 usage_00184.pdb 1 -KSCTIRVNGNGI--KEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 57 usage_00187.pdb 1 -S-CTIRV-----N-KEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 52 usage_00188.pdb 1 -KSCTIRV-----N--EIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 52 usage_00189.pdb 1 -S-CTIRV-----N-GEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 52 usage_00214.pdb 1 -KSCTIRV-----N--EIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 52 usage_00215.pdb 1 KS-CTIRV-----NIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH 54 ctirv EIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH usage_00167.pdb 53 RLNNYRSVTSVNEFVV---L------------------- 69 usage_00168.pdb 54 RLNNYRSVTSVNEFVVKKK--RVYSVVLESYIVDIPQ-- 88 usage_00169.pdb 58 RLNNYRSVTSVNEFVV-----RVYSVVLESYIVDIPQ-- 89 usage_00184.pdb 58 RLNNYRSVTSVNEFVV---------------------L- 74 usage_00187.pdb 53 RLNNYRSVTSVNEFVV---L------------------- 69 usage_00188.pdb 53 RLNNYRSVTSVNEFVV-----RVYSVVLESYIVDIPQ-- 84 usage_00189.pdb 53 RLNNYRSVTSVNEFVK-----RVYSVVLESYIVDIPQ-- 84 usage_00214.pdb 53 RLNNYRSVTSVNEFVV-----KRVYSVVLESYIVDIP-Q 85 usage_00215.pdb 55 RLNNYRSVTSVNEFVV---LERVYSVVLESYIVDIPQ-- 88 RLNNYRSVTSVNEFVv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################