################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:26:14 2021 # Report_file: c_0189_22.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00289.pdb # 2: usage_00499.pdb # 3: usage_00500.pdb # 4: usage_00512.pdb # 5: usage_00618.pdb # 6: usage_00619.pdb # # Length: 224 # Identity: 135/224 ( 60.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 193/224 ( 86.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/224 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00289.pdb 1 ---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 57 usage_00499.pdb 1 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 60 usage_00500.pdb 1 --EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 58 usage_00512.pdb 1 --SVEEFLQEAQIMKKLKHPNLVQLYGVCTKEPPIYIITEYMSHGSLLDYLRDC----VN 54 usage_00618.pdb 1 ---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 57 usage_00619.pdb 1 ---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 57 VEEFLkEAavMKeiKHPNLVQLlGVCTrEPPfYII EfMtyGnLLDYLReC VN usage_00289.pdb 58 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG------------- 104 usage_00499.pdb 61 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG------------- 107 usage_00500.pdb 59 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 118 usage_00512.pdb 55 AQALLDMAAQVASGMAYLESQNFIHRDLAARNCLVGENNVVKVADFG------------- 101 usage_00618.pdb 58 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 117 usage_00619.pdb 58 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 117 AvvLLyMAtQisSaMeYLEkkNFIHRDLAARNCLVGENhlVKVADFG usage_00289.pdb 105 ----LPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 160 usage_00499.pdb 108 -----PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 162 usage_00500.pdb 119 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 178 usage_00512.pdb 102 ----FPIKWTAPEAISYNRFSIKSDVWAFGILLWEIFTYGQVPYPGMSGSEVIEQVERGY 157 usage_00618.pdb 118 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 177 usage_00619.pdb 118 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 177 PIKWTAPEslaYNkFSIKSDVWAFGvLLWEIaTYGmsPYPGidlSqVyEllEkdY usage_00289.pdb 161 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM---- 200 usage_00499.pdb 163 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 206 usage_00500.pdb 179 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 222 usage_00512.pdb 158 RMPRPQGCPEEIYELMLQCWNKSPEERPTFAETLHALETM---- 197 usage_00618.pdb 178 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM---- 217 usage_00619.pdb 178 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET----- 216 RMeRPeGCPEkvYELMraCWqwnPsdRPsFAEihqAfET #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################