################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:01 2021 # Report_file: c_1319_23.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00217.pdb # 2: usage_00301.pdb # 3: usage_01516.pdb # 4: usage_01765.pdb # 5: usage_02093.pdb # 6: usage_02126.pdb # 7: usage_02350.pdb # # Length: 50 # Identity: 0/ 50 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 50 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 50 ( 58.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 --NWETIEAWTKQVT--SENP-D--LIS-RTAIGTTF-LGNNIYLLKVG- 40 usage_00301.pdb 1 -----NYAAWFEGGLPA----------E-FEIEDKKTIGTELIYLIKKNG 34 usage_01516.pdb 1 --NWETIEAWTKQVT--SENP-D--LIS-RTAIGTTF-LGNNIYLLKVG- 40 usage_01765.pdb 1 NQAESWSRSLATLAE--DALAKRPGFRSF-RC---QD-SSLLAF------ 37 usage_02093.pdb 1 ---WETIEAWTKQVT--SENP-D--LIS-RTAIGTTF-LGNNIYLLKVG- 39 usage_02126.pdb 1 --NWETIEAWTEQVT--SKNP-D--LIS-RSAIGTTF-DGDNIYLLKV-- 39 usage_02350.pdb 1 ---WETIEAWTKQVT--SENP-D--LIS-RTAIGTTF-LGNNIYLLKVG- 39 aw s iy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################