################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:22:55 2021 # Report_file: c_0300_48.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00557.pdb # 2: usage_00558.pdb # 3: usage_00559.pdb # 4: usage_00560.pdb # 5: usage_00561.pdb # 6: usage_00562.pdb # 7: usage_00563.pdb # 8: usage_00564.pdb # 9: usage_00565.pdb # 10: usage_00566.pdb # # Length: 140 # Identity: 120/140 ( 85.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/140 ( 85.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/140 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00557.pdb 1 --VIFDVDGTLAKMNG----PYD--LCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 52 usage_00558.pdb 1 --VIFDVDGTLAKMNG---GPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 55 usage_00559.pdb 1 --VIFDVDGTLAKMNG----PYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 54 usage_00560.pdb 1 --VIFDVDGTLAKMNGR--GPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRES-- 54 usage_00561.pdb 1 --VIFDVDGTLAKMN--GE------KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 50 usage_00562.pdb 1 KAVIFDVDGTLAKMN-----PYD--LCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 53 usage_00563.pdb 1 --VIFDVDGTLAKMNGR--GPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 56 usage_00564.pdb 1 KAVIFDVDGTLAKMN-----PYD--LCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 53 usage_00565.pdb 1 --VIFDVDGTLAKMN----------KCDTDVINPMVVELSKMYALMGYQIVVVSGRES-- 46 usage_00566.pdb 1 --VIFDVDGTLAKMN----GPYD--KCDTDVINPMVVELSKMYALMGYQIVVVSGR---- 48 VIFDVDGTLAKMN CDTDVINPMVVELSKMYALMGYQIVVVSGR usage_00557.pdb 53 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 112 usage_00558.pdb 56 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 115 usage_00559.pdb 55 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 114 usage_00560.pdb 55 ---PTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 111 usage_00561.pdb 51 -EDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 109 usage_00562.pdb 54 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 113 usage_00563.pdb 57 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 116 usage_00564.pdb 54 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 113 usage_00565.pdb 47 ---PTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 103 usage_00566.pdb 49 --DPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID 106 PTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID usage_00557.pdb 113 DRTQVVEMWRRIGVECWQVA 132 usage_00558.pdb 116 DRTQVVEMWRRIGVECWQVA 135 usage_00559.pdb 115 DRTQVVEMWRRIGVECWQVA 134 usage_00560.pdb 112 DRTQVVEMWRRIGVECWQVA 131 usage_00561.pdb 110 DRTQVVEMWRRIGVECWQVA 129 usage_00562.pdb 114 DRTQVVEMWRRIGVECWQVA 133 usage_00563.pdb 117 DRTQVVEMWRRIGVECWQVA 136 usage_00564.pdb 114 DRTQVVEMWRRIGVECWQVA 133 usage_00565.pdb 104 DRTQVVEMWRRIGVECWQVA 123 usage_00566.pdb 107 DRTQVVEMWRRIGVECWQVA 126 DRTQVVEMWRRIGVECWQVA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################