################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:05 2021 # Report_file: c_0327_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # # Length: 129 # Identity: 49/129 ( 38.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/129 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/129 ( 14.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 YHWFLLAQPYDLPERLIGADPEHFLDYTLRRMAQG-R-DIYHPQALESYRRAFRDPAVRH 58 usage_00057.pdb 1 YHWFLLAQPYDLPERLIGADPEHFLDYTLRRMAQG-R-DIYHPQALESYRRAFRDPAVRH 58 usage_00063.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 usage_00064.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 usage_00065.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 usage_00066.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 usage_00067.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 usage_00068.pdb 1 YHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 60 YHW LAQP LPE L G DP L P A E YR AF DP RH usage_00056.pdb 59 AMCEDYRAAVGVDADADQADRDAGRRLQCPVQVLWQER------PYAAGQHPLEIWKTWA 112 usage_00057.pdb 59 AMCEDYRAAVGVDADADQADRDAGRRLQCPVQVLWEER------PYAAGQHPLEIWKTWA 112 usage_00063.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGAS-----------GTPLDVWRKWA 109 usage_00064.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGAT-------------PLDVWRKWA 107 usage_00065.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGAS-------------PLDVWRKWA 107 usage_00066.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSA-----ATPLDVWRKWA 115 usage_00067.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGAS-------------PLDVWRKWA 107 usage_00068.pdb 61 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGA--------------PLDVWRKWA 106 MCEDYRA D D D AG P LW PL W WA usage_00056.pdb 113 GQVEGAA-- 119 usage_00057.pdb 113 GQVEGAAIG 121 usage_00063.pdb 110 SDVQGAP-- 116 usage_00064.pdb 108 SDVQGAP-- 114 usage_00065.pdb 108 SDVQGAP-- 114 usage_00066.pdb 116 SDVQGAP-- 122 usage_00067.pdb 108 SDVQGAP-- 114 usage_00068.pdb 107 SDVQGAP-- 113 V GA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################