################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:56 2021 # Report_file: c_0822_29.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00017.pdb # 2: usage_00102.pdb # 3: usage_00155.pdb # 4: usage_00187.pdb # 5: usage_00221.pdb # # Length: 80 # Identity: 8/ 80 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 80 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 80 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -YDAFLEKLP----ENDCLYAIYDFEYEINGNE-GKRS-KIVFFTWSPDTAPVRSKMVYA 53 usage_00102.pdb 1 -LTELVQSIDKNNEI-QCAYVVFDA------------VSKIHFFMYARESSNSRDRMTYA 46 usage_00155.pdb 1 PYATFVKMLP----DKDCRYALYDATYETKE---SKKE-DLVFIFWAPESAPLKSKMIYA 52 usage_00187.pdb 1 TLTELVQSIDKNNEI-QCAYVVFDA------------VSKIHFFMYARESSNSRDRMTYA 47 usage_00221.pdb 1 NFDQFIEAID---KN-VPCYAAFDFEYTTN---DGPRD-KLILISWNPDSGAPRTKMLYS 52 c Y D k f s r M Ya usage_00017.pdb 54 SSKDALRRALNGVSTDVQGT 73 usage_00102.pdb 47 SSKQAILKKIEGVNVLT--- 63 usage_00155.pdb 53 SSKDAIKKKLTGIKHELQA- 71 usage_00187.pdb 48 SSKQAILKKIEGVNVLTS-- 65 usage_00221.pdb 53 SSRDALVPLTQGFQGIQ--- 69 SSk A G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################