################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:21:56 2021 # Report_file: c_1369_60.html ################################################################################################ #==================================== # Aligned_structures: 45 # 1: usage_00034.pdb # 2: usage_00165.pdb # 3: usage_00166.pdb # 4: usage_00167.pdb # 5: usage_00168.pdb # 6: usage_00169.pdb # 7: usage_00170.pdb # 8: usage_00171.pdb # 9: usage_00397.pdb # 10: usage_00410.pdb # 11: usage_00703.pdb # 12: usage_00706.pdb # 13: usage_00707.pdb # 14: usage_00708.pdb # 15: usage_00778.pdb # 16: usage_00779.pdb # 17: usage_00780.pdb # 18: usage_00781.pdb # 19: usage_00782.pdb # 20: usage_00783.pdb # 21: usage_00784.pdb # 22: usage_00785.pdb # 23: usage_00786.pdb # 24: usage_00787.pdb # 25: usage_00788.pdb # 26: usage_00789.pdb # 27: usage_00790.pdb # 28: usage_00791.pdb # 29: usage_00796.pdb # 30: usage_00797.pdb # 31: usage_00798.pdb # 32: usage_00799.pdb # 33: usage_00800.pdb # 34: usage_00801.pdb # 35: usage_00802.pdb # 36: usage_01166.pdb # 37: usage_01167.pdb # 38: usage_01204.pdb # 39: usage_01326.pdb # 40: usage_01327.pdb # 41: usage_01328.pdb # 42: usage_01329.pdb # 43: usage_01330.pdb # 44: usage_01331.pdb # 45: usage_01332.pdb # # Length: 70 # Identity: 9/ 70 ( 12.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 70 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 70 ( 48.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANAAAGD-----------GTTTATVLAQAII 48 usage_00165.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00166.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00167.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00168.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00169.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00170.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00171.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00397.pdb 1 -MEDFVRQCF---------NPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMY-- 48 usage_00410.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00703.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00706.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00707.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00708.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00778.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00779.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00780.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00781.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00782.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00783.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00784.pdb 1 --VSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 47 usage_00785.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00786.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00787.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00788.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00789.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00790.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00791.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00796.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00797.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00798.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00799.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00800.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00801.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_00802.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01166.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01167.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01204.pdb 1 DGVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 49 usage_01326.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01327.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01328.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01329.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01330.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01331.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 usage_01332.pdb 1 -GVSVAREIELEDKFENMGAQMVKEVASKANDAAGD-----------GTTTATVLAQAII 48 vsvaReie aqMvkEvAsKAn aaGd gtTtatVlaqa usage_00034.pdb 49 TEGLKAVAA- 57 usage_00165.pdb 49 TEGLKAVAA- 57 usage_00166.pdb 49 TEGLKAVAA- 57 usage_00167.pdb 49 TEGLKAVAA- 57 usage_00168.pdb 49 TEGLKAVAA- 57 usage_00169.pdb 49 TEGLKAVAA- 57 usage_00170.pdb 49 TEGLKAVAA- 57 usage_00171.pdb 49 TEGLKAVAA- 57 usage_00397.pdb ---------- usage_00410.pdb 49 TEGLKAVAA- 57 usage_00703.pdb 49 TEGLKAVAA- 57 usage_00706.pdb 49 TEGLKAVAA- 57 usage_00707.pdb 49 TEGLKAVAA- 57 usage_00708.pdb 49 TEGLKAVAAG 58 usage_00778.pdb 48 TEGLKAVAAG 57 usage_00779.pdb 48 TEGLKAVAAG 57 usage_00780.pdb 48 TEGLKAVAAG 57 usage_00781.pdb 48 TEGLKAVAAG 57 usage_00782.pdb 48 TEGLKAVAAG 57 usage_00783.pdb 48 TEGLKAVAAG 57 usage_00784.pdb 48 TEGLKAVAAG 57 usage_00785.pdb 49 TEGLKAVAA- 57 usage_00786.pdb 49 TEGLKAVAA- 57 usage_00787.pdb 49 TEGLKAVAA- 57 usage_00788.pdb 49 TEGLKAVAA- 57 usage_00789.pdb 49 TEGLKAVAA- 57 usage_00790.pdb 49 TEGLKAVAA- 57 usage_00791.pdb 49 TEGLKAVAA- 57 usage_00796.pdb 49 TEGLKAVAA- 57 usage_00797.pdb 49 TEGLKAVAA- 57 usage_00798.pdb 49 TEGLKAVAA- 57 usage_00799.pdb 49 TEGLKAVAA- 57 usage_00800.pdb 49 TEGLKAVAA- 57 usage_00801.pdb 49 TEGLKAVAA- 57 usage_00802.pdb 49 TEGLKAVAA- 57 usage_01166.pdb 49 TEGLAAVAAG 58 usage_01167.pdb 49 TEGLAAVAA- 57 usage_01204.pdb 50 TEGLKAVAAG 59 usage_01326.pdb 49 TEGLKAVAA- 57 usage_01327.pdb 49 TEGLKAVAA- 57 usage_01328.pdb 49 TEGLKAVAA- 57 usage_01329.pdb 49 TEGLKAVAA- 57 usage_01330.pdb 49 TEGLKAVAA- 57 usage_01331.pdb 49 TEGLKAVAA- 57 usage_01332.pdb 49 TEGLKAVAA- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################