################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:20 2021 # Report_file: c_1489_49.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00960.pdb # 2: usage_02007.pdb # 3: usage_02008.pdb # 4: usage_02009.pdb # 5: usage_03510.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 68 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 68 ( 66.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00960.pdb 1 ---------VLTEGIEPIP----IA--D-------GPYTDKPNPHAWMSPRNALVYVENI 38 usage_02007.pdb 1 ---------AVSDGVDVIY----LEGQN-------E-KG-KEDPHAWLNLENGIIFAKNI 38 usage_02008.pdb 1 ---------AVSDGVDVIY----LEGQN-------E-KG-KEDPHAWLNLENGIIFAKNI 38 usage_02009.pdb 1 ---------AVSDGVDVIY----LEGQN-------E-KG-KEDPHAWLNLENGIIFAKNI 38 usage_03510.pdb 1 DEKLVDISN------DVIYHISNRTNHSLNEHIHI--------------ALTDHIAFAIK 40 dvIy n i ni usage_00960.pdb 39 RQAFVELD 46 usage_02007.pdb 39 AKQLSAK- 45 usage_02008.pdb 39 AKQLSAK- 45 usage_02009.pdb 39 AKQLSAK- 45 usage_03510.pdb 41 RQQQG--- 45 q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################