################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:24:39 2021 # Report_file: c_1492_228.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00024.pdb # 2: usage_00040.pdb # 3: usage_00124.pdb # 4: usage_00180.pdb # 5: usage_00181.pdb # 6: usage_00205.pdb # 7: usage_00283.pdb # 8: usage_00486.pdb # 9: usage_00611.pdb # 10: usage_00612.pdb # 11: usage_00952.pdb # 12: usage_01292.pdb # 13: usage_01430.pdb # 14: usage_01887.pdb # 15: usage_01901.pdb # 16: usage_01902.pdb # 17: usage_01903.pdb # 18: usage_01904.pdb # 19: usage_01905.pdb # 20: usage_01995.pdb # 21: usage_01998.pdb # 22: usage_02040.pdb # 23: usage_02159.pdb # 24: usage_02166.pdb # 25: usage_02167.pdb # 26: usage_02183.pdb # # Length: 41 # Identity: 4/ 41 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 41 ( 63.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 41 ( 36.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_00040.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSR--------- 32 usage_00124.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_00180.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_00181.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSR--------- 32 usage_00205.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_00283.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS 41 usage_00486.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_00611.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_00612.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_00952.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSR--------- 32 usage_01292.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSR--------- 32 usage_01430.pdb 1 -LSWLK--EESAAFQLGARDFIARSFAEFA----------- 27 usage_01887.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_01901.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_01902.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_01903.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_01904.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_01905.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLL------------ 29 usage_01995.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSS---------- 31 usage_01998.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_02040.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLSSR--------- 32 usage_02159.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_02166.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLL------------ 29 usage_02167.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 usage_02183.pdb 1 RLSLLEEYGCCKELASRLRYARTMVDKLLS----------- 30 LSlLe gcckelasrlRyartmvdkll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################