################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:38 2021 # Report_file: c_0595_13.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00070.pdb # 4: usage_00106.pdb # 5: usage_00107.pdb # 6: usage_00129.pdb # 7: usage_00131.pdb # # Length: 87 # Identity: 21/ 87 ( 24.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 87 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 87 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --DIIFVCTGNTCRSP-AEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEK 56 usage_00034.pdb 1 -MDII-FVTGNTCRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEK 57 usage_00070.pdb 1 --DIIFVCTGNTCRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEK 57 usage_00106.pdb 1 -MRVLFVCTGNTCRSPMAEGIFNAKSKALG-KDWEAKSAGVFAPEGFPASSEAVEVLKKE 58 usage_00107.pdb 1 ---VLFVCTGNTCRSPMAEGIFNAKSKALG-KDWEAKSAGVFAPEGFPASSEAVEVLKKE 56 usage_00129.pdb 1 PYRILFVCTGNTCRSP-AAALLENKQ----LPGVEVKSAGVFAAEGSEASVHAK-VLKEK 54 usage_00131.pdb 1 -MDIIFVCTGNTSRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEK 58 vcTGNTcRSP Ae f SAGVFA A Av L usage_00033.pdb 57 H-IA-LNHVSSPLTEELESADLVLA-- 79 usage_00034.pdb 58 H-IA-LNHVSSPLTEELMESADLVLAM 82 usage_00070.pdb 58 H-IA-LNHVSSPLTEELMESADLVLAM 82 usage_00106.pdb 59 YGIDISDHRAKSLREEDLKGADLVLAM 85 usage_00107.pdb 57 YGIDISDHRAKSLREEDLKGADLVLAM 83 usage_00129.pdb 55 G-IE-AAHRSSQLKKEHIDWATHVLA- 78 usage_00131.pdb 59 H-IA-LNHVSSPLTEELMESADLVLAM 83 I H L eE a vl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################