################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:15 2021 # Report_file: c_1409_280.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00313.pdb # 2: usage_00314.pdb # 3: usage_00315.pdb # 4: usage_00348.pdb # 5: usage_00449.pdb # 6: usage_01563.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 47 ( 2.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 47 ( 80.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00313.pdb 1 ---LIEA-SRAMGA---------TPMQIVR----KVLLPEAL----- 25 usage_00314.pdb 1 --GLIEA-SRAMGA---------TPMQIVR----KVLLPEAL----- 26 usage_00315.pdb 1 PTGLIEA-SRAMGA---------TPMQIVR----KVLLPEAL----- 28 usage_00348.pdb 1 -PGQNEA-ARSLGM---------THAMAMR----YVI---------- 22 usage_00449.pdb 1 -------KREKTHG---------E------VERRIVSQLLTLMDGL- 24 usage_01563.pdb 1 ---GKEP-RFVLRALRMLPSTSRRLNHYVL----YK---------AV 30 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################