################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:16 2021 # Report_file: c_0609_74.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00081.pdb # 2: usage_00196.pdb # 3: usage_00197.pdb # 4: usage_00352.pdb # 5: usage_00570.pdb # # Length: 64 # Identity: 11/ 64 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 64 ( 46.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 64 ( 23.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 -PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPA 59 usage_00196.pdb 1 ---------RI--LGH-VKNVILIDPQEYLPFVWL-NHAWLILTDSGGIQEEAPSLGKPV 47 usage_00197.pdb 1 -PNVREPVNRI--LGH-VKNVILIDPQEYLPFVWL-NHAWLILTDSGGIQEEAPSLGKPV 55 usage_00352.pdb 1 NPNVREPVNRI--LGH-VKNVILIDPQEYLPFVWL-NHAWLILTDSGGIQEEAPSLGKPV 56 usage_00570.pdb 1 -PKVREVAQKI--LGS-HDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPV 56 i lg li p fv l a ILtDSGgIqEEApsl kPv usage_00081.pdb 60 LNIR 63 usage_00196.pdb 48 LVR- 50 usage_00197.pdb 56 LV-- 57 usage_00352.pdb 57 LV-- 58 usage_00570.pdb 57 LVLR 60 Lv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################