################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:54 2021 # Report_file: c_0833_24.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00095.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00370.pdb # 5: usage_00371.pdb # 6: usage_00518.pdb # 7: usage_00519.pdb # 8: usage_00520.pdb # # Length: 99 # Identity: 58/ 99 ( 58.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 99 ( 61.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 99 ( 37.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 DAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLA 60 usage_00345.pdb 1 -----------------------PINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLA 37 usage_00346.pdb 1 -----------------------PINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLA 37 usage_00370.pdb 1 -----------------------PINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLA 37 usage_00371.pdb 1 -----------------------PINHVDRIKEPLALIHPQNNSRTPLKPLLRLMGELLA 37 usage_00518.pdb 1 -----------------------PINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLA 37 usage_00519.pdb 1 -----------------------PINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLA 37 usage_00520.pdb 1 --------------SREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLA 46 PINHVDRIKEPLALIHPQN SRTPLKPLLRLMGELLA usage_00095.pdb 61 RGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 99 usage_00345.pdb 38 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 63 usage_00346.pdb 38 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 63 usage_00370.pdb 38 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 63 usage_00371.pdb 38 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 63 usage_00518.pdb 38 RGKTFEAHIIPDAHAI-NTMEDAVKI------------- 62 usage_00519.pdb 38 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 63 usage_00520.pdb 47 RGKTFEAHIIPDAGHAINTMEDAVKI------------- 72 RGKTFEAHIIPDAgha NTMEDAVKI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################