################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:40 2021 # Report_file: c_1141_13.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00120.pdb # 2: usage_00231.pdb # 3: usage_00239.pdb # 4: usage_00240.pdb # 5: usage_00241.pdb # 6: usage_00294.pdb # 7: usage_00295.pdb # 8: usage_00319.pdb # 9: usage_00407.pdb # 10: usage_00639.pdb # # Length: 111 # Identity: 90/111 ( 81.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 90/111 ( 81.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/111 ( 1.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 TINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESI 60 usage_00231.pdb 1 TINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESI 60 usage_00239.pdb 1 -INGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESI 59 usage_00240.pdb 1 TINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESI 60 usage_00241.pdb 1 TINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESI 60 usage_00294.pdb 1 -INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESI 59 usage_00295.pdb 1 -INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESI 59 usage_00319.pdb 1 -INGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESI 59 usage_00407.pdb 1 TINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESI 60 usage_00639.pdb 1 -INGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESI 59 INGWLRDFLWAQA VI SYGS LSAYG FL HF AFSLMFLFSGRGYWQELIESI usage_00120.pdb 61 VWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 111 usage_00231.pdb 61 VWAHNKLNVAPAIQPRALSIIQGRAVGVAHYLLGGIVTTWAFFLARSLSIG 111 usage_00239.pdb 60 VWAHNKLNVAPAIQPRALSIIQGRAVGVAHYLLGGIVTTWAFFLARSLSIG 110 usage_00240.pdb 61 VWAHNKLNVAPAIQPRALSIIQGRAVGVAHYLLGGIVTTWAFFLARSLSIG 111 usage_00241.pdb 61 VWAHNKLNVAPAIQPRALSIIQGRAVGVAHYLLGGIVTTWAFFLARSLSIG 111 usage_00294.pdb 60 VWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 110 usage_00295.pdb 60 VWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 110 usage_00319.pdb 60 VWAHNKLKVAPAIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISV- 109 usage_00407.pdb 61 VWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 111 usage_00639.pdb 60 VWAHNKLKVAPAIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISV- 109 VWAHNKL VAPA QPRALSI QGRAVGV HYLLGGI TTWAFFLAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################