################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:32:33 2021 # Report_file: c_1399_153.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00367.pdb # 2: usage_00374.pdb # 3: usage_00538.pdb # 4: usage_00543.pdb # 5: usage_00545.pdb # 6: usage_00562.pdb # 7: usage_00563.pdb # 8: usage_00620.pdb # 9: usage_00622.pdb # 10: usage_00624.pdb # 11: usage_00686.pdb # 12: usage_00713.pdb # 13: usage_00715.pdb # 14: usage_00718.pdb # 15: usage_00830.pdb # 16: usage_00873.pdb # 17: usage_00879.pdb # 18: usage_00894.pdb # 19: usage_01504.pdb # 20: usage_01532.pdb # # Length: 64 # Identity: 4/ 64 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 64 ( 12.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 64 ( 51.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00367.pdb 1 -----------LATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 41 usage_00374.pdb 1 -----YQDDAELATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 47 usage_00538.pdb 1 ----------------IPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 36 usage_00543.pdb 1 -----EQDDAELATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 47 usage_00545.pdb 1 ------------ATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 40 usage_00562.pdb 1 --------DAELATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 44 usage_00563.pdb 1 -----------LATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 41 usage_00620.pdb 1 ------------ATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 40 usage_00622.pdb 1 -------DDAELATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 45 usage_00624.pdb 1 VNLINYQDDAELATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 52 usage_00686.pdb 1 ----------------IPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 36 usage_00713.pdb 1 ----------------IPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 36 usage_00715.pdb 1 ---------------AIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 37 usage_00718.pdb 1 ----------------IPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 36 usage_00830.pdb 1 -------------SSRVNELHDLLNQYSYEYY---SEYDKLLHELIKIEEE-HPEYKT-- 41 usage_00873.pdb 1 ---------------AIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 37 usage_00879.pdb 1 ------------ATRAIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 40 usage_00894.pdb 1 ---------------AIPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 37 usage_01504.pdb 1 -----------DPSDQVLALRELLNED-----LTAEQVELLT-IINEIISGSES-VNAGI 42 usage_01532.pdb 1 ----------------IPELTKLLNDE------DQVVVNKAAVMVHQLSKK-EA-SRHAI 36 eL LLN v k e usage_00367.pdb 42 MRS- 44 usage_00374.pdb 48 MRS- 50 usage_00538.pdb 37 MRS- 39 usage_00543.pdb 48 MRS- 50 usage_00545.pdb 41 MRSP 44 usage_00562.pdb 45 MRSP 48 usage_00563.pdb 42 MR-- 43 usage_00620.pdb 41 MRSP 44 usage_00622.pdb 46 MRS- 48 usage_00624.pdb 53 MRS- 55 usage_00686.pdb 37 MRS- 39 usage_00713.pdb 37 MRS- 39 usage_00715.pdb 38 MRS- 40 usage_00718.pdb 37 MRS- 39 usage_00830.pdb ---- usage_00873.pdb 38 MRS- 40 usage_00879.pdb 41 MRSP 44 usage_00894.pdb 38 MRSP 41 usage_01504.pdb 43 NS-- 44 usage_01532.pdb 37 MRS- 39 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################