################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:11 2021 # Report_file: c_1367_165.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00011.pdb # 2: usage_00125.pdb # 3: usage_00377.pdb # 4: usage_00435.pdb # 5: usage_00521.pdb # 6: usage_00791.pdb # # Length: 71 # Identity: 4/ 71 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 71 ( 22.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 71 ( 26.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 --FFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 58 usage_00125.pdb 1 -ASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQM 59 usage_00377.pdb 1 -AFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 59 usage_00435.pdb 1 SAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQS---- 56 usage_00521.pdb 1 SGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDV 60 usage_00791.pdb 1 SAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMK-D-KSEWEAKAAKAKDDYDRAV 58 lf R e P s e W K y kaak k y usage_00011.pdb 59 AAY-RAKGKPD 68 usage_00125.pdb 60 KRAI------- 63 usage_00377.pdb 60 AAY-R------ 63 usage_00435.pdb ----------- usage_00521.pdb 61 ADY-K------ 64 usage_00791.pdb 59 KEF-EA----- 63 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################