################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:29 2021 # Report_file: c_0365_9.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # # Length: 78 # Identity: 32/ 78 ( 41.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 78 ( 41.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 78 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 KIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCPKDAVPEVKSVAKYISYADG 60 usage_00003.pdb 1 KIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCPKDAVPEVKSVAKYISYADG 60 usage_00005.pdb 1 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV-KKVGFPVAVRNAVEEVRKVAVYITQRNG 59 usage_00006.pdb 1 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV-KKVGFPVAVRNAVEEVRKVAVYITQRNG 59 K Y KY L D EI GDDV DIEV G P AV EV VA YI G usage_00002.pdb 61 GRGCGRDVVEQVLKAHG- 77 usage_00003.pdb 61 GRGCGRDVVEQVLKAHG- 77 usage_00005.pdb 60 GEGALREVAELIHFLK-- 75 usage_00006.pdb 60 GEGALREVAELIHFLKND 77 G G R V E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################