################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:13 2021 # Report_file: c_1276_29.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00004.pdb # 2: usage_00270.pdb # 3: usage_00296.pdb # 4: usage_00297.pdb # 5: usage_00299.pdb # 6: usage_00300.pdb # 7: usage_00340.pdb # 8: usage_00524.pdb # 9: usage_00755.pdb # 10: usage_01076.pdb # 11: usage_01077.pdb # 12: usage_01299.pdb # 13: usage_01300.pdb # 14: usage_01389.pdb # # Length: 47 # Identity: 2/ 47 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 47 ( 14.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 47 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ---QRYIELVVVADRRVFMKYNSDLNIIRTRVHEIVNIINEFYRSLN 44 usage_00270.pdb 1 --PQRYVMLAIVADHGMVTKYSGNSSAITTRVHQMVSHVTEMY---- 41 usage_00296.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIY---- 41 usage_00297.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIYRYMY 45 usage_00299.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIY---- 41 usage_00300.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIY---- 41 usage_00340.pdb 1 --PFKYVETVFVVDKAMVTKYNGDLDKIKTKMYEAANNMNEM----- 40 usage_00524.pdb 1 NLPQRYIELVVVADRRVFMKYNSDLNIIRTRVHEIVNIINKFY---- 43 usage_00755.pdb 1 ---KKYIEFYVIVDNRMYRYYNNDKPAIKIKVYEMINAVNTKF---- 40 usage_01076.pdb 1 --PFRYVELFIVVDQGMVTKNNGDLDKIKARMYELANIVNEIL---- 41 usage_01077.pdb 1 ---FRYVELFIVVDQGMVTKNNGDLDKIKARMYELANIVNEIL---- 40 usage_01299.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIY---- 41 usage_01300.pdb 1 --PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIY---- 41 usage_01389.pdb 1 ---QVSVTLQLVVDSSMFAKYNGDAKKIVTVLDTRVNIMKSIF---- 40 v D k n d I n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################