################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:22 2021 # Report_file: c_1424_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00298.pdb # 2: usage_00299.pdb # 3: usage_00612.pdb # 4: usage_00613.pdb # 5: usage_00614.pdb # 6: usage_00615.pdb # 7: usage_00616.pdb # 8: usage_00786.pdb # 9: usage_00841.pdb # # Length: 119 # Identity: 28/119 ( 23.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/119 ( 24.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 69/119 ( 58.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00298.pdb 1 -MSAFWYAVRTAVINAASGRQTVDAALAAAQTN-AAA------------MATLEKLMKAF 46 usage_00299.pdb 1 QMSAFWYAVRTAVINAASGRQTVDAALAAAQTN-AAA-------------MATLEKLMKA 46 usage_00612.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKDAQTNA----------AAEFAALLHSLLEANC 49 usage_00613.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKDAQTNA----------AAEFAALLHSLLEANC 49 usage_00614.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKDAQTNA----------AAEFAALLHSLLEANC 49 usage_00615.pdb 1 QMSAFWYAVRTAVINAASGRQTVDEALKDAQTNA----------AAEFAALLHSLLEANC 50 usage_00616.pdb 1 QMSAFWYAVRTAVINAASGRQTVDEALKDAQTNA----------AAEFAALLHSLLEANC 50 usage_00786.pdb 1 QMSAFWYAVRTAVINAASGRQTVDAALAAAQTN--------------------AAAMATL 40 usage_00841.pdb 1 -MSAFWYAVRTAVINAASGRQTVDEALKDAQTR-ITAARDGLRAVEARNVTHLLQQELTE 58 MSAFWYAVRTAVINAASGRQTVD AL AQTn usage_00298.pdb 47 ESLKSFQQQQQ------------------------------------------------ 57 usage_00299.pdb 47 FESLKSFQQQQQ--------------------------------------------Q-- 59 usage_00612.pdb 50 SLALAEELLLD------------------------------------------------ 60 usage_00613.pdb 50 SLALAEELLLDG----------------------------------------------- 61 usage_00614.pdb 50 SLALAEELLLDG----------------------------------------------- 61 usage_00615.pdb 51 SLALAEELLLDG----------------------------------------------- 62 usage_00616.pdb 51 SLALAEELLLDG----------------------------------------------- 62 usage_00786.pdb 41 EKLMKAFESLKS----------------------------------------------F 53 usage_00841.pdb 59 AQKGFQDVEAQAATANHTVALASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVER- 116 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################