################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:27 2021 # Report_file: c_0053_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00058.pdb # 6: usage_00059.pdb # 7: usage_00060.pdb # 8: usage_00073.pdb # 9: usage_00074.pdb # 10: usage_00075.pdb # 11: usage_00076.pdb # 12: usage_00077.pdb # # Length: 244 # Identity: 183/244 ( 75.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 183/244 ( 75.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/244 ( 0.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 -VEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 59 usage_00041.pdb 1 -VEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 59 usage_00042.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 usage_00043.pdb 1 -VEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 59 usage_00058.pdb 1 -PALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFN 59 usage_00059.pdb 1 -PALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFN 59 usage_00060.pdb 1 -PALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFN 59 usage_00073.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 usage_00074.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 usage_00075.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 usage_00076.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 usage_00077.pdb 1 PVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFT 60 I EIMDAV IPVMAKCRIGH EA LEA GVDMIDESEVLT ADPFFHIYKKKF usage_00040.pdb 60 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 119 usage_00041.pdb 60 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 119 usage_00042.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 usage_00043.pdb 60 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 119 usage_00058.pdb 60 VPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDEEV 119 usage_00059.pdb 60 VPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDEEV 119 usage_00060.pdb 60 VPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDEEV 119 usage_00073.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 usage_00074.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 usage_00075.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 usage_00076.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 usage_00077.pdb 61 APFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIIEAVRHVRLVNENIRLIQRMTDEEI 120 PFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNI EAVRH RL NE I QRMTDEE usage_00040.pdb 120 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 179 usage_00041.pdb 120 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 179 usage_00042.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 usage_00043.pdb 120 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 179 usage_00058.pdb 120 YGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRL 179 usage_00059.pdb 120 YGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRL 179 usage_00060.pdb 120 YGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRL 179 usage_00073.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 usage_00074.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 usage_00075.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 usage_00076.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 usage_00077.pdb 121 YGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEDIYKILLEIKKLGRL 180 YGVA A Y LA V E GLP VLENEPIYEGFT EI Y LLE KKLGRL usage_00040.pdb 180 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 239 usage_00041.pdb 180 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 239 usage_00042.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 usage_00043.pdb 180 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 239 usage_00058.pdb 180 PVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVA 239 usage_00059.pdb 180 PVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVA 239 usage_00060.pdb 180 PVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVA 239 usage_00073.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 usage_00074.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 usage_00075.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 usage_00076.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 usage_00077.pdb 181 PVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLA 240 PVVNFAAGGVATPADAALMM G DGVFVGSGIFKS NP ARAIVEA D PD A usage_00040.pdb 240 EISR 243 usage_00041.pdb 240 EISR 243 usage_00042.pdb 241 EIS- 243 usage_00043.pdb 240 EISR 243 usage_00058.pdb 240 EVS- 242 usage_00059.pdb 240 EVSK 243 usage_00060.pdb 240 EVSK 243 usage_00073.pdb 241 EIS- 243 usage_00074.pdb 241 EIS- 243 usage_00075.pdb 241 EIS- 243 usage_00076.pdb 241 EIS- 243 usage_00077.pdb 241 EIS- 243 E S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################