################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:07 2021 # Report_file: c_0621_3.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00102.pdb # 2: usage_00159.pdb # 3: usage_00176.pdb # 4: usage_00177.pdb # 5: usage_00178.pdb # 6: usage_00179.pdb # 7: usage_00180.pdb # 8: usage_00181.pdb # # Length: 103 # Identity: 18/103 ( 17.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/103 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/103 ( 49.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00102.pdb 1 ---------------KYSGREGSKLTLSRKELKELIKKELCLGE-MKE-------SS--- 34 usage_00159.pdb 1 -PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SFLGK----------- 45 usage_00176.pdb 1 RPLEQAVAAIVCTFQEYAGRCGDKYKLAQAELKELLQKELA---TWTP--TEFRECDYNK 55 usage_00177.pdb 1 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SWLG-KR-T------- 48 usage_00178.pdb 1 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SWLG-KR-T------- 48 usage_00179.pdb 1 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SFLG----T------- 46 usage_00180.pdb 1 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SFLG-KR-T------- 48 usage_00181.pdb 1 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---SFLG----T------- 46 kYsG eGdK kL ELKELl EL usage_00102.pdb 35 IDDLMKSLDKNSD-----QEIDFKEYSVFLTMLCMAY------ 66 usage_00159.pdb 46 -EAAFQKLMSNL-DSNRDNEVDFQEYCVFLSCIAMMCNEFFEG 86 usage_00176.pdb 56 FMSVLDTNK---D-----AEVDFVEYVRSLACLCLY------- 83 usage_00177.pdb 49 DEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSSIAMMSNEFFE- 89 usage_00178.pdb 49 DEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSSIAMMSNEFFEG 90 usage_00179.pdb 47 DEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSSIAMMSN----- 83 usage_00180.pdb 49 DEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSSI---------- 80 usage_00181.pdb 47 DEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSSIAMMSNE---- 84 l EvDF EY vfL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################