################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:33:35 2021 # Report_file: c_0351_4.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00011.pdb # 5: usage_00015.pdb # 6: usage_00030.pdb # 7: usage_00038.pdb # 8: usage_00041.pdb # 9: usage_00088.pdb # 10: usage_00103.pdb # 11: usage_00104.pdb # 12: usage_00106.pdb # 13: usage_00108.pdb # 14: usage_00112.pdb # 15: usage_00113.pdb # 16: usage_00114.pdb # # Length: 87 # Identity: 56/ 87 ( 64.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 87 ( 65.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 87 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00002.pdb 1 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00003.pdb 1 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00011.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00015.pdb 1 WYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00030.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00038.pdb 1 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00041.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00088.pdb 1 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 60 usage_00103.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00104.pdb 1 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAY-LSVSDFDNAKGLNVKHYKIRKL 59 usage_00106.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00108.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00112.pdb 1 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 60 usage_00113.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 usage_00114.pdb 1 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 60 WYFGK R Er LL NPRGTFL RESETTKGAY LS D D KG VKHYKIRKL usage_00001.pdb 61 DSGGFYITSRTQFNSLQQLVAYYSKH- 86 usage_00002.pdb 61 DSGGFYITSRTQFNSLQQLVAYYSKH- 86 usage_00003.pdb 61 DSGGFYITSRTQFNSLQQLVAYYSKH- 86 usage_00011.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 usage_00015.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 usage_00030.pdb 61 DSGGFYIWSRTQFSSLQQLVAYYSKH- 86 usage_00038.pdb 61 DSGGFYITSRTQFNSLQQLVAYYSKH- 86 usage_00041.pdb 61 DSGGFYITSRTQFSSLQQLVAYYS--- 84 usage_00088.pdb 61 DNGGYYITTRAQFETLQQLVQHYSER- 86 usage_00103.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 usage_00104.pdb 60 DSGGFYITSRTQFNSLQQLVAYYSKHA 86 usage_00106.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 usage_00108.pdb 61 DSGGFYIWSRTQFSSLQQLVAYYSKH- 86 usage_00112.pdb 61 DNGGYYITTRAQFETLQQLVQHYSER- 86 usage_00113.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 usage_00114.pdb 61 DSGGFYITSRTQFSSLQQLVAYYSKH- 86 D GG YI R QF LQQLV YS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################