################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:04 2021 # Report_file: c_1480_243.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00402.pdb # 2: usage_00403.pdb # 3: usage_00653.pdb # 4: usage_03123.pdb # # Length: 68 # Identity: 8/ 68 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 68 ( 23.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 68 ( 60.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00402.pdb 1 -SPTNLIMVTSTSLMLFA-G-------------FTLADT---------LACGVVGHIIGV 36 usage_00403.pdb 1 -SPTNLIMVTSTSLMLFAAG-------------FTLADT---------LACGVVGHIIGV 37 usage_00653.pdb 1 FIGSSTNVIMVASTTLML-FAGRFGLAPSANRK-TLADT---------LACGTVGHIIGV 49 usage_03123.pdb 1 -------LCNLFAIALGR-YI-------QSRGK------GPGLGLPELLATTSFGHLLAA 39 s L LAcg vGHiigv usage_00402.pdb 37 GVVLGL-- 42 usage_00403.pdb 38 GVVLGL-- 43 usage_00653.pdb 50 GVVLGLKT 57 usage_03123.pdb 40 GVV----- 42 GVV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################