################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:57 2021 # Report_file: c_0670_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00177.pdb # 2: usage_00178.pdb # 3: usage_00179.pdb # 4: usage_00180.pdb # 5: usage_00214.pdb # 6: usage_00648.pdb # 7: usage_00763.pdb # # Length: 81 # Identity: 5/ 81 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 81 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 81 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 VHAFESNNFIYFLTVQRETLDA--Q--TFHTRIIRFCSI---------NSGLHSYMEMPL 47 usage_00178.pdb 1 VHAFESNNFIYFLTVQRETLDA--Q--TFHTRIIRFCSI---------NSGLHSYMEMPL 47 usage_00179.pdb 1 VHAFESNNFIYFLTVQRETLDA--Q--TFHTRIIRFCSI---------NSGLHSYMEMPL 47 usage_00180.pdb 1 VHAFESNNFIYFLTVQRETLDA--Q--TFHTRIIRFCSI---------NSGLHSYMEMPL 47 usage_00214.pdb 1 VHAFESNNFIYFLTVQRETLDA--Q--TFHTRIIRFCSI---------NSGLHSYMEMPL 47 usage_00648.pdb 1 -HSFHTGAFVYFLTVQPASVTD--DPSALHTRLARLSAT---------EPELGDYRELVL 48 usage_00763.pdb 1 -QAVDYGDYIYFFFREIAV-EYNGK--VVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARL 56 haf fiYFltvq htR r c l sy e L usage_00177.pdb 48 ECILT----KEVFNILQAAYV 64 usage_00178.pdb 48 ECILT----KEVFNILQAAYV 64 usage_00179.pdb 48 ECILT----EVFNILQAAYV- 63 usage_00180.pdb 48 ECILT----EVFNILQAAYV- 63 usage_00214.pdb 48 ECILT----KEVFNILQAAYV 64 usage_00648.pdb 49 DCRFAP---GQPYPVLQVAHS 66 usage_00763.pdb 57 NCSVP-GDSHFYFNILQAVTD 76 C a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################