################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:13 2021 # Report_file: c_0175_43.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00042.pdb # 2: usage_00429.pdb # 3: usage_00558.pdb # 4: usage_00559.pdb # # Length: 146 # Identity: 20/146 ( 13.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/146 ( 39.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/146 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 GKVLIIAGSRLYSGAPVLSGGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGF 60 usage_00429.pdb 1 -RVLLIGGNYPYGGAIIAALACVNSGAGLVTVATHKDNITALHSHLPEAA---------- 49 usage_00558.pdb 1 -RVVLIGGNRQYGGAIISTEACINSGAGLTTVITDVKNHGPLHARCPEAV---------- 49 usage_00559.pdb 1 -RVVLIGGNRQYGGAIISTEACINSGAGLTTVITDVKNHGPLHARCPEAV---------- 49 rV lIgGnr YgGAii ac nsGaGL tv t n lh r PEa usage_00042.pdb 61 FSL---QNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTL--EKPAVIDADAINV 115 usage_00429.pdb 50 ---FD-VEKDRLSEQITAADVVLG-PGLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINL 104 usage_00558.pdb 50 ---VGFEETVLLTNVVEQADVILIGPGLGLDATAQQILK-VLAQHQKQQWLIIDGSAITL 105 usage_00559.pdb 50 ---VGFEETVLLTNVVEQADVILIGPGLGLDATAQQILK-VLAQHQKQQWLIIDGSAITL 105 e l aDV li PGLg d aq vl q liIDgsAI l usage_00042.pdb 116 LDTSVLKE---------RKSPAV-LT 131 usage_00429.pdb 105 L-------AKRKAIWPTK-QIILT-- 120 usage_00558.pdb 106 F-------SQGNFSLTYPEKVVFTP- 123 usage_00559.pdb 106 F-------SQGNFSLTYPEKVVFTP- 123 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################