################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:59 2021 # Report_file: c_0122_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00009.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00021.pdb # 5: usage_00033.pdb # # Length: 180 # Identity: 71/180 ( 39.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/180 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/180 ( 6.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 TYRVVLGRHSLSTNEPGSLAVKVS--KLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKI 58 usage_00011.pdb 1 TFRVVVGEHNLNQNNGTEQYVGVQ--KIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYV 58 usage_00012.pdb 1 TFRVVVGEHNLNQNNGTEQYVGVQ--KIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYV 58 usage_00021.pdb 1 TYQVVLGEYDRSVLQGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKV 60 usage_00033.pdb 1 TYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKV 60 T VV Ge g eq VHp WN va G DIAL L s L v usage_00009.pdb 59 QLGCLPAAGTILPNNYVCYVTGWGRLQTNGAS----PDILQQGQLLVVDYATCSKPGWWG 114 usage_00011.pdb 59 QLGVLPRAGTILANNSPCYITGWGLTRTNGQL----AQTLQQAYLPTVDYAICSSSSYWG 114 usage_00012.pdb 59 QLGVLPRAGTILANNSPCYITGWGLTRTNGQL----AQTLQQAYLPTVDYAICSSSSYWG 114 usage_00021.pdb 61 QLANLPPAGDILPNEAPCYISGWGRLYTGGPL----PDKLQEALLPVVDYEHCSQYDWWG 116 usage_00033.pdb 61 QLANLPPAGDILPNEAPCYISGWG----RLYTGGPLPDKLQQALLPTVDYEHCSQWDWWG 116 QL LP AG IL N pCYi GWG g LQqa Lp VDY CS WG usage_00009.pdb 115 STVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFT 174 usage_00011.pdb 115 STVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFT 173 usage_00012.pdb 115 STVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFT 173 usage_00021.pdb 117 ITVKKTMVCAGGDTRSGC-DGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFT 175 usage_00033.pdb 117 ITVKKTMVCAGGDTRSGC-NGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFT 175 TVK MvCAGGD GDSGGPL C G VHGvtSFvS GCN KPtVFT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################