################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:59 2021 # Report_file: c_0769_59.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00265.pdb # 2: usage_00284.pdb # 3: usage_00285.pdb # 4: usage_00286.pdb # 5: usage_00287.pdb # 6: usage_00288.pdb # 7: usage_00660.pdb # 8: usage_00686.pdb # 9: usage_00769.pdb # 10: usage_00770.pdb # 11: usage_00771.pdb # # Length: 67 # Identity: 42/ 67 ( 62.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 67 ( 67.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 67 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00265.pdb 1 ---GINLPGCEVDLPAVSEKDRKDLEFGVAQGVDMIFASFIRTAEQVREVRAALGEKGKD 57 usage_00284.pdb 1 --RGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 58 usage_00285.pdb 1 --RGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 58 usage_00286.pdb 1 --RGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 58 usage_00287.pdb 1 --RGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 58 usage_00288.pdb 1 --RGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 58 usage_00660.pdb 1 --KGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKN 58 usage_00686.pdb 1 --KGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKN 58 usage_00769.pdb 1 ---GVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 57 usage_00770.pdb 1 ---GVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 57 usage_00771.pdb 1 DRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD 60 GvNLPG VDLPAVS KD DL FGVeQ VDM FASFIR A V VRk LG KG usage_00265.pdb 58 ILIISKI 64 usage_00284.pdb 59 IMIICKI 65 usage_00285.pdb 59 IMIICKI 65 usage_00286.pdb 59 IMIICKI 65 usage_00287.pdb 59 IMIICKI 65 usage_00288.pdb 59 IMIICKI 65 usage_00660.pdb 59 IKIISKI 65 usage_00686.pdb 59 IKIISKI 65 usage_00769.pdb 58 IMIICKI 64 usage_00770.pdb 58 IMIICKI 64 usage_00771.pdb 61 IMIICKI 67 I II KI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################