################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:57:54 2021 # Report_file: c_0169_5.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00012.pdb # 2: usage_00019.pdb # 3: usage_00037.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00061.pdb # 7: usage_00109.pdb # 8: usage_00127.pdb # 9: usage_00139.pdb # 10: usage_00140.pdb # 11: usage_00157.pdb # 12: usage_00162.pdb # 13: usage_00186.pdb # 14: usage_00203.pdb # 15: usage_00204.pdb # 16: usage_00205.pdb # 17: usage_00206.pdb # 18: usage_00208.pdb # # Length: 179 # Identity: 21/179 ( 11.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/179 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/179 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 GR--------------TVAYRADELFPMCSVFKTLSSAAVLRDLDRNG-EFLSRRILYTQ 45 usage_00019.pdb 1 --GRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAAAAVLKQS-ETQKQLLNQPVEIKP 57 usage_00037.pdb 1 --GRLGVALIDTADNTQVLYRGDERFPMCGTSKVMAAAAVLKQS-ETQKQLLNQPVEIKP 57 usage_00059.pdb 1 --GRLGVCAIDTATGRRALHRADERFPFCSTFKAMLGAAVLAQS-VAHPGLLQQRVTYGR 57 usage_00060.pdb 1 --GRLGVCAIDTATGRRALHRADERFPFCSTFKAMLGAAVLAQS-VAHPGLLQQRVTYGR 57 usage_00061.pdb 1 --GRLGVCAIDTATGRRALHRADERFPFCSTFKAMLGAAVLAQS-VAHPGLLQQRVTYGR 57 usage_00109.pdb 1 --GRLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLARV-DQGKERLDRRITYGK 57 usage_00127.pdb 1 --GRLGVALINTADDSQTLYRGDERFAMCSTGKVMAAAAVLKQS-ESNPEVVNKRLEIKK 57 usage_00139.pdb 1 --GRLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLAQV-DQGKERLDRRITYSK 57 usage_00140.pdb 1 ---RLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLAQV-DQGKERLDRRITYSK 56 usage_00157.pdb 1 --GKIGIYTLNT----NIKYNESYHFPICSVFKFLLVGAILDYD-HNQ-GFLDKKIPINQ 52 usage_00162.pdb 1 ---RLGVAALDTSNGTRIAHHARERFPLCGTYAVVAAAAILARA-SLDASLLPRRILYRR 56 usage_00186.pdb 1 --GRLGFVALDTATGARIAHRGDERFPFCSTSKMMLCAAVLARS-AGEPALLQRRIAYAK 57 usage_00203.pdb 1 --GRLGVYALDTGTGRTIAYRADERFPMCSTFKALAAAAVLAQV-DAGKESLDRRITYTK 57 usage_00204.pdb 1 --GRLGVYALDTGTGRTIAYRADERFPMCSTFKALAAAAVLAQV-DAGKESLDRRITYTK 57 usage_00205.pdb 1 --GRLGVYALDTGTGRTIAYRADERFPMCSTFKALAAAAVLAQV-DAGKESLDRRITYTK 57 usage_00206.pdb 1 --GRLGVYALDTGTGRTIAYRADERFPMCSTFKALAAAAVLAQV-DAGKESLDRRITYTK 57 usage_00208.pdb 1 --GRLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLARV-DQGKERLDRRITYGK 57 e Fp C k aA L l usage_00012.pdb 46 DDVEQADGAPETGKPQNLANGMTVEELCEVSITASDNCAANLMLRELGGPAAVTRFVRSL 105 usage_00019.pdb 58 ADL--VNYNPIAEK--HVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAI 113 usage_00037.pdb 58 ADL--VNYNPIAEK--HVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAI 113 usage_00059.pdb 58 SDL--VNYSPVTER--HVDTGMTVAELCAATIQYSDNTAANELMKRIGGPAAVTAYARSI 113 usage_00060.pdb 58 SDL--VNYSPVTER--HVDTGMTVAELCAATIQYSDNTAANELMKRIGGPAAVTAYARSI 113 usage_00061.pdb 58 SDL--VNYSPVTER--HVDTGMTVAELCAATIQYSDNTAANELMKRIGGPAAVTAYARSI 113 usage_00109.pdb 58 EDL--VDYSPVTEK--HVGDGMTVAELCEAAITLSDNTAANLLLEALGGPAALTAFLRSI 113 usage_00127.pdb 58 SDL--VVWSPITEK--HLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSI 113 usage_00139.pdb 58 ADL--VDYSPVTEK--HVGGGMTVAELCEAAITYSDNTAANLLLEALGGPAALTAFLRSI 113 usage_00140.pdb 57 ADL--VDYSPVTEK--HVGGGMTVAELCEAAITYSDNTAANLLLEALGGPAALTAFLRSI 112 usage_00157.pdb 53 DDIGKLGYAPITAK--NVGKTLTISQLNYAAI-LSDSPASNILVRELGGLQNLNKFIKKL 109 usage_00162.pdb 57 YEV--VAGSPVTES--HVDTGMTIAQLCAAMLQSGDKGAGNLLMNVLGGPQAVTAFAHES 112 usage_00186.pdb 58 GDL--IRYSPITEQ--HVGAGMSVAELCAATLQYSDNTAANLLIALLGGPQTVTAYARSI 113 usage_00203.pdb 58 DDL--VDYSPVTEK--HVGTGMTLAELCEAAITYSDNTAANLLLDEIGGPKGLTAFLRSI 113 usage_00204.pdb 58 DDL--VDYSPVTEK--HVGTGMTLAELCEAAITYSDNTAANLLLDEIGGPKGLTAFLRSI 113 usage_00205.pdb 58 DDL--VDYSPVTEK--HVGTGMTLAELCEAAITYSDNTAANLLLDEIGGPKGLTAFLRSI 113 usage_00206.pdb 58 DDL--VDYSPVTEK--HVGTGMTLAELCEAAITYSDNTAANLLLDEIGGPKGLTAFLRSI 113 usage_00208.pdb 58 EDL--VDYSPVTEK--HVGDGMTVAELCEAAITLSDNTAANLLLEALGGPAALTAFLRSI 113 d P mt L a sD A N GGp t usage_00012.pdb 106 GDRVTRLDRWEPELNSAEPGRVTDTTSPRAITRTYGRLVLGDALNPRDRRLLTSWLLAN 164 usage_00019.pdb 114 GDETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGN 172 usage_00037.pdb 114 GDETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGN 172 usage_00059.pdb 114 GDDTFRLDRWETELNTALPGDLRDTTTPAAMAANLRVLVLGDALPPAQRAQLIEWLRGN 172 usage_00060.pdb 114 GDDTFRLDRWETELNTALPGDLRDTTTPAAMAANLRVLVLGDALPPAQRAQLIEWLRGN 172 usage_00061.pdb 114 GDDTFRLDRWETELNTALPGDLRDTTTPAAMAANLRVLVLGDALPPAQRAQLIEWLRGN 172 usage_00109.pdb 114 GDEVTRLDRWEPELNEAAPGDPRDTTTPAAMAATLRTLLLGDALSPASRQQLVDWLVAN 172 usage_00127.pdb 114 GDVTFRLDRTEPALNSAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGN 172 usage_00139.pdb 114 GDEVTRLDRWEPELNEALPGDPRDTTTPRAMAATLRKLLLGDALSPASREQLVDWLLAN 172 usage_00140.pdb 113 GDEVTRLDRWEPELNEALPGDPRDTTTPRAMAATLRKLLLGDALSPASREQLVDWLLAN 171 usage_00157.pdb 110 GDNDTIITADEPEINYTQPHSNINKTTPKAITKDIYKLAFGNILDKKHKDIFIKYLQD- 167 usage_00162.pdb 113 GDTVFRLDRWEPELNRAAPGDERDTSTPVAMVDTLQRLLLGDTLQQAQRAQLTDWM--- 168 usage_00186.pdb 114 GDATFRLDRREPELNTALPGDERDTTTPAAMAASVHRLLVGDALGAAQRAQLNAWMLGN 172 usage_00203.pdb 114 GDDVTRLDRWEPELNEALPGDPRDTTTPAAMAATLRALLLGDALSPASRAQLTDWMRGN 172 usage_00204.pdb 114 GDDVTRLDRWEPELNEALPGDPRDTTTPAAMAATLRALLLGDALSPASRAQLTDWMRGN 172 usage_00205.pdb 114 GDDVTRLDRWEPELNEALPGDPRDTTTPAAMAATLRALLLGDALSPASRAQLTDWMRGN 172 usage_00206.pdb 114 GDDVTRLDRWEPELNEALPGDPRDTTTPAAMAATLRALLLGDALSPASRAQLTDWMRGN 172 usage_00208.pdb 114 GDEVTRLDRWEPELNEAAPGDPRDTTTPAAMAATLRTLLLGDALSPASRQQLVDWLVAN 172 GD rldr E lN a Pg dtttP A L G L r l w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################