################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:29 2021 # Report_file: c_0129_11.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00023.pdb # 2: usage_00064.pdb # 3: usage_00082.pdb # 4: usage_00083.pdb # 5: usage_00093.pdb # 6: usage_00132.pdb # 7: usage_00154.pdb # 8: usage_00155.pdb # 9: usage_00156.pdb # 10: usage_00157.pdb # 11: usage_00158.pdb # 12: usage_00159.pdb # 13: usage_00177.pdb # 14: usage_00201.pdb # 15: usage_00237.pdb # 16: usage_00246.pdb # 17: usage_00247.pdb # 18: usage_00281.pdb # # Length: 209 # Identity: 6/209 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/209 ( 6.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/209 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 -KTAVITGGGSGIGLATAKRFVAEGA-YVFIVDVSRK--ELEQAAAEIG----R-N-VTA 50 usage_00064.pdb 1 --GVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEK--RSADFAKE-R----P-N-LFY 48 usage_00082.pdb 1 -RAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQP--ALEQAVNGLRGQ-GF-D-AHG 53 usage_00083.pdb 1 -QVAFITGGASGAGFGQAKVFGQAGA-KIVVADVRAE--AVEKAVAELEGL-GI-T-AHG 53 usage_00093.pdb 1 --VAIITGACGGIGLETSRVLARAGA-RVVLADLPET--DLAGAAASVG----R-G-AVH 49 usage_00132.pdb 1 -ACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAA--ALDRAAQELG----A-AVAAR 51 usage_00154.pdb 1 --VAIITGAANGIGLEAARVFMKEGA-KVVIADFNEA--AGKEAVEANP------G-VVF 48 usage_00155.pdb 1 --VAIITGAANGIGLEAARVFMKEGA-KVVIADFNEA--AGKEAVEANP------G-VVF 48 usage_00156.pdb 1 --VAIITGAANGIGLEAARVFMKEGA-KVVIADFNEA--AGKEAVEANP------G-VVF 48 usage_00157.pdb 1 --VAIITGAANGIGLEAARVFMKEGA-KVVIADFNEA--AGKEAVEANP------G-VVF 48 usage_00158.pdb 1 -RVAIITGAAAGIGFATAQRFAEDGA-IVVLCDVQEA--RVREAAARLAAT-GA-T-VSA 53 usage_00159.pdb 1 -RVAIITGAAAGIGFATAQRFAEDGA-IVVLCDVQEA--RVREAAARLAAT-GA-T-VSA 53 usage_00177.pdb 1 --NVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINP---KV-T-VTF 53 usage_00201.pdb 1 ---AIVTGAASGIGAVTAERLAAEGA-RVALADLDAV--GVQTLAEKIRGAD-GTH-AIG 52 usage_00237.pdb 1 --VCIVTGGGSGIGRATAELFAKNGA-YVVVADVNED--AAVRVANEIG----S-K-AFG 49 usage_00246.pdb 1 GKVALVSGGARGG-ASHVR-AVAEGA-KVVFGDILDE--EGKAA-AELA----D-A-ARY 48 usage_00247.pdb 1 -KVALVSGGARGG-ASHVR-AVAEGA-KVVFGDILDE--EGKAA-AELA----D-A-ARY 47 usage_00281.pdb 1 -KTAVITGGNSGIGLATAKRFVAEGA-YVFIVGRRRK--ELEQAAAEIG----R-N-VTA 50 g G g d usage_00023.pdb 51 VKADV-TKLEDLDRLYAIVREQRGS-IDVLFNNA------GAIE--QKTLEEITPEHYDR 100 usage_00064.pdb 49 FHGDV-ADPLTLKKFVEYAMEKLQR-IDVLVNNA------CRGS--KGILSSLLYEEFDY 98 usage_00082.pdb 54 VVCDV-RHLDEMVRLADEAFRLLGG-VDVVFSNA------GIVV--AGPLAQMNHDDWRW 103 usage_00083.pdb 54 IVLDI-MDREAYARAADEVEAVFGQAPTLLSNTA------GVNS--FGPIEKTTYDDFDW 104 usage_00093.pdb 50 HVVDL-TNEVSVRALIDFTIDTFGR-LDIVDNNA------AHSDPADMLVTQMTVDVWDD 101 usage_00132.pdb 52 IVADV-TDAEAMTAAAAEAEAV-AP-VSILVNSA------GIAR--LHDALETDDATWRQ 100 usage_00154.pdb 49 IRVDV-SDRESVHRLVENVAERFGK-IDILINNA------GITR--DSMLSKMTVDQFQQ 98 usage_00155.pdb 49 IRVDV-SDRESVHRLVENVAERFGK-IDILINNA------GITR--DSMLSKMTVDQFQQ 98 usage_00156.pdb 49 IRVDV-SDRESVHRLVENVAERFGK-IDILINNA------GITR--DSMLSKMTVDQFQQ 98 usage_00157.pdb 49 IRVDV-SDRESVHRLVENVAERFGK-IDILINNA------GITR--DSMLSKMTVDQFQQ 98 usage_00158.pdb 54 YRVDV-TRRDEVDAMVAAVLAAHQR-VDILVNNA------GITK--DARLAKMTEAQFDA 103 usage_00159.pdb 54 YRVDV-TRRDEVDAMVAAVLAAHQR-VDILVNNA------GITK--DARLAKMTEAQFDA 103 usage_00177.pdb 54 YPYDVTVPIAETTKLLKTIFAQLKT-VDVLINGA------GILD--DH--------QIER 96 usage_00201.pdb 53 IEVDL-ADPASVRA-VAAAVEEFGG-LDILHNNATALASS---L--DVPVADADPEVWDR 104 usage_00237.pdb 50 VRVDV-SSAKDAES-VEKTTAKWGR-VDVLVNNA------GFGT--TGNVVTIPEETWDR 98 usage_00246.pdb 49 VHLDV-TQPAQWKAAVDTAVTAFGG-LHVLVNNA------GILN--IGTIEDYALTEWQR 98 usage_00247.pdb 48 VHLDV-TQPAQWKAAVDTAVTAFGG-LHVLVNNA------GILN--IGTIEDYALTEWQR 97 usage_00281.pdb 51 VKADV-TKLEDLDRLYAIVREQRGS-IDVLFANS------GAIE--QKTLEEITPEHYDR 100 D a usage_00023.pdb 101 TFDVNVRGLIFTVQKALPLL-----R-DGGSVILTSSVA---GVLGLQ--AHDTYSAAKA 149 usage_00064.pdb 99 ILSVGLKAPYELSRLCRDEL--I--K-NKGRIINIASTR---AFQSEP--DSEAYASAKG 148 usage_00082.pdb 104 VIDIDLWGSIHAVEAFLPRLL-E--QGTGGHIAFTASFA---GLVPNA--GLGTYGVAKY 155 usage_00083.pdb 105 IIGVNLNGVINGMVTFVPRMI-A--SGRPGHIVTVSSLG---GFMGSA--LAGPYSAAKA 156 usage_00093.pdb 102 TFTVNARGTMLMCKYAIPRLI-S--A-GGGAIVNISSAT---AHAAYD--MSTAYACTKA 152 usage_00132.pdb 101 VMAVNVDGMFWASRAFGRAMV-A--R-GAGAIVNLGSMS---GTIVNRPQFASSYMASKG 153 usage_00154.pdb 99 VINVNLTGVFHCTQAVLPYMA-E--Q-GKGKIINTSSVT---GTYGNV--GQTNYAAAKA 149 usage_00155.pdb 99 VINVNLTGVFHCTQAVLPYMA-E--Q-GKGKIINTSSVT---GTYGNV--GQTNYAAAKA 149 usage_00156.pdb 99 VINVNLTGVFHCTQAVLPYMA-E--Q-GKGKIINTSSVT---GTYGNV--GQTNYAAAKA 149 usage_00157.pdb 99 VINVNLTGVFHCTQAVLPYMA-E--Q-GKGKIINTSSVT---GTYGNV--GQTNYAAAKA 149 usage_00158.pdb 104 VIDVNLKGVFNCAQAVAGLMT-E--Q-GKGVILNASSVV---GLYGNF--GQTNYAASKF 154 usage_00159.pdb 104 VIDVNLKGVFNCAQAVAGLMT-E--Q-GKGVILNASSVV---GLYGNF--GQTNYAASKF 154 usage_00177.pdb 97 TIAVNYTGLVNTTTAILDFWDKRKGG-PGGIICNIGSVT---GFNAIY--QVPVYSGTKA 150 usage_00201.pdb 105 T-RVNLSGA-VATQAALPHLI-A--R-GGGCVINTSS-AASG----DL--SHPAYAASKA 151 usage_00237.pdb 99 I-SVNVKGIFLCSKYVIPV-R-R--N-GGGSIINTTSYT---ATSAIA--DRTAYVASKG 147 usage_00246.pdb 99 ILDVNLTGVFLGIRAVVKPK--E--A-GRGSIINISSIE---GLAGTV--ACHGYTATKF 148 usage_00247.pdb 98 ILDVNLTGVFLGIRAVVKPK--E--A-GRGSIINISSIE---GLAGTV--ACHGYTATKF 147 usage_00281.pdb 101 TFDVNVRGLIFTVQKALPLL-----R-DGGSVILTSSVA---GVLGLQ--AHDTYSAAKA 149 v g G S Y K usage_00023.pdb 150 AVRSLARTWTTELKGRSIRVNAVSPGA-- 176 usage_00064.pdb 149 GIVALTHALAMSLGPDVLVNCIAPGW--- 174 usage_00082.pdb 156 GVVGLAETLAREVKPNGIGVSVLCPMVVE 184 usage_00083.pdb 157 ASINLMEGYRQGLEKYGIGVSVCTPA--- 182 usage_00093.pdb 153 AIETLTRYVATQYGRHGVRCNAIAPG--- 178 usage_00132.pdb 154 AVHQLTRALAAEWAGRGVRVNALAPG--- 179 usage_00154.pdb 150 GVIGMTKTWAKELARKGINVNAVAPG--- 175 usage_00155.pdb 150 GVIGMTKTWAKELARKGINVNAVAPG--- 175 usage_00156.pdb 150 GVIGMTKTWAKELARKGINVNAVAPG--- 175 usage_00157.pdb 150 GVIGMTKTWAKELARKGINVNAVAPG--- 175 usage_00158.pdb 155 GVIGFTKTWARELGPKGVRVNAVCPG--- 180 usage_00159.pdb 155 GVIGFTKTWARELGPKGVRVNAVCPG--- 180 usage_00177.pdb 151 AVVNFTSSLAKLAPITGVTAYTVNPGI-- 177 usage_00201.pdb 152 ALISLTRSVATQAGRSGVRCNAIAPGL-- 178 usage_00237.pdb 148 AISSLTRA-A-DHAKEGIRVNAVAPG--- 171 usage_00246.pdb 149 AVRGLTKSTALELGPSGIRVNSIHPG--- 174 usage_00247.pdb 148 AVRGLTKSTALELGPSGIRVNSIHPG--- 173 usage_00281.pdb 150 AVRSLARTWTTELKGRSIRVNAVSPGA-- 176 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################