################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:36 2021 # Report_file: c_1445_69.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00830.pdb # 2: usage_01484.pdb # 3: usage_01823.pdb # 4: usage_01824.pdb # 5: usage_04723.pdb # 6: usage_07796.pdb # 7: usage_08828.pdb # 8: usage_08829.pdb # 9: usage_08834.pdb # 10: usage_09293.pdb # 11: usage_10091.pdb # 12: usage_10307.pdb # 13: usage_13804.pdb # 14: usage_13874.pdb # 15: usage_13876.pdb # # Length: 40 # Identity: 19/ 40 ( 47.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 40 ( 47.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 40 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00830.pdb 1 -NHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAW---- 35 usage_01484.pdb 1 -NHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW---- 35 usage_01823.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA- 39 usage_01824.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA- 39 usage_04723.pdb 1 RNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG--- 37 usage_07796.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA- 39 usage_08828.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAW---- 36 usage_08829.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAW---- 36 usage_08834.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAW---- 36 usage_09293.pdb 1 RNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA- 39 usage_10091.pdb 1 -NHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD 39 usage_10307.pdb 1 --HFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG--- 35 usage_13804.pdb 1 -NHFRCQVQFYGLSENDEWT------VTQIVSA------- 26 usage_13874.pdb 1 -NHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAW---- 35 usage_13876.pdb 1 -NHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA- 38 HFRCQVQF GLSE D W VTQ SA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################