################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:13 2021 # Report_file: c_0696_71.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00168.pdb # 2: usage_00169.pdb # 3: usage_00268.pdb # 4: usage_00369.pdb # 5: usage_00470.pdb # # Length: 47 # Identity: 2/ 47 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 47 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 47 ( 19.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00168.pdb 1 AEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPL---GFLCIVD 44 usage_00169.pdb 1 AEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPL---GFLCIVD 44 usage_00268.pdb 1 GQCLVGETISDVAQGDLVFIPPMTWHQFRANRG-DCL---GFLCVVN 43 usage_00369.pdb 1 AELVSDGARRPFHAGDVVYLPPGSRHQVVNPTDE---QFQYAVWWDA 44 usage_00470.pdb 1 AVITFDDQKIDLVPEDVL-VPAHKIHAIAGKG-----R--FKLQITL 39 a d D v p Hq l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################