################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:03 2021 # Report_file: c_1409_58.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00091.pdb # 2: usage_00665.pdb # 3: usage_00681.pdb # 4: usage_00682.pdb # 5: usage_00683.pdb # 6: usage_00684.pdb # 7: usage_00685.pdb # 8: usage_00694.pdb # 9: usage_01327.pdb # 10: usage_01689.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 62 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00091.pdb 1 ---------GLADTFMLLR---------LPFD--SEEARLLNIQIFETIYHASMEASCEL 40 usage_00665.pdb 1 -------AFFIALVLGLIGYTPNVAQ-SAQTLQGMQFIMIVLPVLFF----M-------- 40 usage_00681.pdb 1 -------GMFAAVTGALMLGG---ACERARLFPMMVFLFLWMTIVYCPIACWV------- 43 usage_00682.pdb 1 ILFAVYQGMFAAVTGALMLGG---ACERARLFPMMVFLFLWMTIVYCPIACWV------- 50 usage_00683.pdb 1 --------MFAAVTGALMLGG---ACERARLFPMMVFLFLWMTIVYCPIACWV------- 42 usage_00684.pdb 1 -------GMFAAVTAILMAGA---GCERARLGPMMVFLFIWLTVVYCPIAYWT------- 43 usage_00685.pdb 1 -------GMFAAVTAILMAGA---GCERARLGPMMVFLFIWLTVVYCPIAYWT------- 43 usage_00694.pdb 1 --------MFAAVTAILMAGA---GCERARLGPMMVFLFIWLTVVYCPIAYWT------- 42 usage_01327.pdb 1 --------MFAAVTAILMAGA---GCERARLGPMMVFLFIWLTVVYCPIAYWT------- 42 usage_01689.pdb 1 --------MFAAVTAILMAGA---GCERARLGPMMVFLFIWLTVVYCPIAYWT------- 42 f A t L a m f usage_00091.pdb 41 AQ 42 usage_00665.pdb -- usage_00681.pdb -- usage_00682.pdb -- usage_00683.pdb -- usage_00684.pdb -- usage_00685.pdb -- usage_00694.pdb -- usage_01327.pdb -- usage_01689.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################