################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:47 2021 # Report_file: c_1484_462.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00180.pdb # 2: usage_01168.pdb # 3: usage_01185.pdb # 4: usage_02778.pdb # 5: usage_02943.pdb # # Length: 83 # Identity: 0/ 83 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 83 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/ 83 ( 72.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00180.pdb 1 -------TSK------------DKEVIETLSEIYSIVITLDHVEKAYLKDSI---DDTQY 38 usage_01168.pdb 1 -------RWN------------SIEEKRISQENELHAYLSKLILAEKERE--LDD--SKH 37 usage_01185.pdb 1 -------TSK------------DKEVIETLSEIYSIVITLDHVEKAYLKDSI---DDTQY 38 usage_02778.pdb 1 SQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN--------------- 45 usage_02943.pdb 1 ----------------------QDKAKTLAKEVFGHLERLDAAAKDR--------NGSQA 30 e usage_00180.pdb 39 TNTVDKLLKQFKVYLN--SQNKE 59 usage_01168.pdb 38 DKYLMDMDELFSQVDEKRK---- 56 usage_01185.pdb 39 TNTVDKLLKQFKVYLN------- 54 usage_02778.pdb ----------------------- usage_02943.pdb 31 KIQYQEALADFDSFLN------- 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################