################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:48:33 2021 # Report_file: c_0117_10.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00031.pdb # 4: usage_00032.pdb # 5: usage_00044.pdb # 6: usage_00045.pdb # 7: usage_00114.pdb # 8: usage_00115.pdb # 9: usage_00116.pdb # 10: usage_00117.pdb # 11: usage_00138.pdb # 12: usage_00151.pdb # # Length: 117 # Identity: 47/117 ( 40.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/117 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/117 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -EVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSSGNKEDGRF 59 usage_00016.pdb 1 -EVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSSGNKEDGRF 59 usage_00031.pdb 1 -EVEQNSGPLSVPEGAIASLNCTYSFLGSQSFFWYRQYSGKSPELIMFTYREGDKEDGRF 59 usage_00032.pdb 1 -EVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRF 59 usage_00044.pdb 1 -EVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSSGNKEDGRF 59 usage_00045.pdb 1 -EVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSSGNKEDGRF 59 usage_00114.pdb 1 -EVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRF 59 usage_00115.pdb 1 -KVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRF 59 usage_00116.pdb 1 -KVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRF 59 usage_00117.pdb 1 KEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMFIYSNGDKEDGRF 60 usage_00138.pdb 1 -EVEQNSGPLSVPEGAIASLNCTYSFLGSQSFFWYRQYSGKSPELIMFTYREGDKEDGRF 59 usage_00151.pdb 1 -KVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRF 59 V Q LSVPEG SLNCT S Q F WYRQ S P M G K GRF usage_00015.pdb 60 TAQVDKSSKYISLFIRDSQPSDSATYLCAMSTSLPNAGK-ST-FGDGTTLTVKP--- 111 usage_00016.pdb 60 TAQVDKSSKYISLFIRDSQPSDSATYLCAMSTSLPNAGK-ST-FGDGTTLTVKP--- 111 usage_00031.pdb 60 TAQLNKASQHVSLLIRDSQPSDSATYLCAVNDG----GR-LT-FGDGTTLTVK---- 106 usage_00032.pdb 60 TAQLNKASQYVSLLIRDSQPSDSATYLCAVTTDS--WGK-LQ-FGAGTQVVVTP--- 109 usage_00044.pdb 60 TAQVDKSSKYISLFIRDSQPSDSATYLCAMRGDS--SYK-LI-FGSGTRLLVRPDIQ 112 usage_00045.pdb 60 TAQVDKSSKYISLFIRDSQPSDSATYLCAMRGDS--SYK-LI-FGSGTRLLVRPDIQ 112 usage_00114.pdb 60 TAQLNKASQYVSLLIRDSQPSDSATYLCAVTTDS--WGK-LQ-FGAGTQVVVTP--- 109 usage_00115.pdb 60 TAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQG-LT-FGLGTRVSVFP--- 111 usage_00116.pdb 60 TAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQG-LT-FGLGTRVSVFP--- 111 usage_00117.pdb 61 TAQLNKASQYVSLLIRDSQPSDSATYLCAVNFG----GGKLIFGQGTELSVKPNIQ- 112 usage_00138.pdb 60 TAQLNKASQHVSLLIRDSQPSDSATYLCAVNDG----GR-LT-FGDGTTLTVKPNIQ 110 usage_00151.pdb 60 TAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQG-LT-FGLGTRVSVFP--- 111 TA K S SL IRDSQPSDSA Y CA fg gt v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################