################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:00 2021 # Report_file: c_0696_17.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00158.pdb # 2: usage_00166.pdb # 3: usage_00348.pdb # 4: usage_00370.pdb # 5: usage_00371.pdb # 6: usage_00372.pdb # 7: usage_00535.pdb # 8: usage_00536.pdb # 9: usage_00537.pdb # 10: usage_00538.pdb # 11: usage_00539.pdb # 12: usage_00540.pdb # # Length: 52 # Identity: 8/ 52 ( 15.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 52 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 52 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00158.pdb 1 GSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDP-DTEMTGVIVP- 50 usage_00166.pdb 1 GSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDP-DTEMTGVIVP- 50 usage_00348.pdb 1 GHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIF--- 49 usage_00370.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAAG- 50 usage_00371.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAAGP 51 usage_00372.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAAGP 51 usage_00535.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAA-- 49 usage_00536.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAA-- 49 usage_00537.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAA-- 49 usage_00538.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAAGP 51 usage_00539.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAAGP 51 usage_00540.pdb 1 GAVRLFVEDLEGEQHEKLLTPGDFGFVPKNCVHAYRMERH-HSQVVGVAA-- 49 G l q L GD g VP N H gv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################