################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:47 2021 # Report_file: c_1167_47.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00096.pdb # 2: usage_00228.pdb # 3: usage_00318.pdb # 4: usage_00319.pdb # 5: usage_00350.pdb # 6: usage_00351.pdb # 7: usage_00379.pdb # 8: usage_00380.pdb # 9: usage_00454.pdb # 10: usage_00456.pdb # 11: usage_00499.pdb # # Length: 21 # Identity: 3/ 21 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 21 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 21 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 TSRFGIVYVDYKTLKRYPKD- 20 usage_00228.pdb 1 TRRSGLYYVDFPSQRRIPKR- 20 usage_00318.pdb 1 TSKFGIVYVDFNTLERHPKA- 20 usage_00319.pdb 1 SSRFGLVYIDKNDGNKRKL-K 20 usage_00350.pdb 1 TSKFGIVYVDFNTLERHPKA- 20 usage_00351.pdb 1 TRRFGLYYVDFPSQRRIPKR- 20 usage_00379.pdb 1 TSRFGIVYVDYKTLKRYPKD- 20 usage_00380.pdb 1 TSRFGIVYVDYKTLKRYPKD- 20 usage_00454.pdb 1 SKRFGIVYVDYSTQKRIVKD- 20 usage_00456.pdb 1 TSRFGIVYVDYKTLKRYPKD- 20 usage_00499.pdb 1 TSRFGIVYVDYKTLKRYPKD- 20 fG YvD r k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################