################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:33 2021 # Report_file: c_0699_59.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00009.pdb # 2: usage_00083.pdb # 3: usage_00084.pdb # 4: usage_00085.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00088.pdb # 8: usage_00617.pdb # 9: usage_00618.pdb # 10: usage_00627.pdb # 11: usage_00628.pdb # 12: usage_01274.pdb # 13: usage_01422.pdb # 14: usage_01750.pdb # # Length: 66 # Identity: 16/ 66 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 66 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 66 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 CKIPFSSQDE-KGVTQNGRLITANPIVTD--KEKPVNIEAEPPFGESYIVVGAGEKALKL 57 usage_00083.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 54 usage_00084.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 54 usage_00085.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 54 usage_00086.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 54 usage_00087.pdb 1 --VPIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 55 usage_00088.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGDKALKL 54 usage_00617.pdb 1 CKVPIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGNSALTL 57 usage_00618.pdb 1 CKVPIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGNSALTL 57 usage_00627.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGNSALTL 54 usage_00628.pdb 1 ---PIEIRDV-NKEKVVGRIISSTPLAEN--TNSVTNIELEPPFGDSYIVIGVGNSALTL 54 usage_01274.pdb 1 ---PAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITH 57 usage_01422.pdb 1 CKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITH 60 usage_01750.pdb 1 CKIPFSTQDE-KGATQNGRLITANPIVTD--KEKPVNIEAEPPFGESYIVVGAGEKALKL 57 P GR I P E PPFG SYIV G G usage_00009.pdb 58 SWFKKG 63 usage_00083.pdb 55 NWFRK- 59 usage_00084.pdb 55 NWFRK- 59 usage_00085.pdb 55 NWFRK- 59 usage_00086.pdb 55 NWFRK- 59 usage_00087.pdb 56 NWFRK- 60 usage_00088.pdb 55 NWFRK- 59 usage_00617.pdb 58 HW---- 59 usage_00618.pdb 58 H----- 58 usage_00627.pdb 55 HWFRK- 59 usage_00628.pdb 55 HWFRK- 59 usage_01274.pdb 58 HWHRSG 63 usage_01422.pdb 61 HWHRS- 65 usage_01750.pdb 58 S----- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################