################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:53 2021 # Report_file: c_1201_159.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00816.pdb # 2: usage_00822.pdb # 3: usage_00969.pdb # 4: usage_01073.pdb # 5: usage_01110.pdb # 6: usage_01381.pdb # 7: usage_01579.pdb # 8: usage_01580.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 57 ( 75.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00816.pdb 1 -----HTEI-KAP-------FDGTIGDALVNI-G----DYVSAS--TTELVRVT-N- 35 usage_00822.pdb 1 EYDVY--TD-GSYVN-G--Q-YAW-AYAFV-----KDG----KV-HYEDAD------ 33 usage_00969.pdb 1 -------RE-ATTDQ-N--------GRFDF-DHIPN------GT-YYISS-ELTWSA 31 usage_01073.pdb 1 --DEV--LL-VKKLV-E----D---AIVPT-R--GS------KCAAGID--LYS-NT 32 usage_01110.pdb 1 -----T-HN-AYRYIDGE---LWI-YSAVLDS-N---------KNNKFVRFQ----- 31 usage_01381.pdb 1 K----N-VLHRTDNSTR-TGVVPV-TVVYEDH-S---------G-ELHKI-R----- 33 usage_01579.pdb 1 -----R-HE-VYLSSDG--TNWGSPVASGSWF-A--------DS-TTKYSNFE---- 34 usage_01580.pdb 1 -----R-HE-VYLSSDG--TNWGSPVASGSWF-A--------DS-TTKYSNFE---- 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################