################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:09:00 2021 # Report_file: c_0115_1.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00001.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00008.pdb # 6: usage_00009.pdb # 7: usage_00010.pdb # 8: usage_00011.pdb # 9: usage_00012.pdb # 10: usage_00013.pdb # 11: usage_00014.pdb # 12: usage_00015.pdb # 13: usage_00016.pdb # 14: usage_00021.pdb # 15: usage_00039.pdb # 16: usage_00040.pdb # 17: usage_00044.pdb # 18: usage_00045.pdb # 19: usage_00046.pdb # # Length: 131 # Identity: 31/131 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/131 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/131 ( 33.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 VVELVVPAGVLGGPHPFHLHGHAFSVVRSAGS------------------STYNFVNPVK 42 usage_00005.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00006.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00007.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00008.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00009.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00010.pdb 1 -IEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 41 usage_00011.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00012.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00013.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00014.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00015.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00016.pdb 1 -IEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 41 usage_00021.pdb 1 VVELVVPAGVLGGPHPFHLHGHAFSVVRSAGS------------------STYNFVNPVK 42 usage_00039.pdb 1 IVEIVLNN-QDTGTHPFHLHGHAFQTIQRDR-TYDDALGEVPHSFDPDNHPAF-PEYPMR 57 usage_00040.pdb 1 VIEFSMPGGVVGGGHPIHLHGHNFWVIRSANS------------------SVYNYNDPVI 42 usage_00044.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00045.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 usage_00046.pdb 1 TIEIALPAGAAGGPHPFHLHGHDFAVSESASN------------------STSNYDDPIW 42 E p gG HPfHLHGH F v sa s P usage_00001.pdb 43 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDA------- 95 usage_00005.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00006.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 92 usage_00007.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00008.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00009.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 92 usage_00010.pdb 42 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 91 usage_00011.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00012.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 92 usage_00013.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00014.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00015.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 92 usage_00016.pdb 42 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNT---------- 91 usage_00021.pdb 43 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEW 102 usage_00039.pdb 58 RDTLYVR-PQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDA------- 109 usage_00040.pdb 43 RDVVNIGTTGDNVTIRFETNNPGPWFLHCHIDWHLDLGFAVVMAEDIPDAAAAN------ 96 usage_00044.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 usage_00045.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAW 102 usage_00046.pdb 43 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASAN------ 96 RDvv g gd vtIRF tdNPGpWF HCHI HL G a V aED usage_00001.pdb ----------- usage_00005.pdb ----------- usage_00006.pdb ----------- usage_00007.pdb ----------- usage_00008.pdb ----------- usage_00009.pdb ----------- usage_00010.pdb ----------- usage_00011.pdb ----------- usage_00012.pdb ----------- usage_00013.pdb ----------- usage_00014.pdb ----------- usage_00015.pdb ----------- usage_00016.pdb ----------- usage_00021.pdb 103 AQLCEIYDDL- 112 usage_00039.pdb ----------- usage_00040.pdb ----------- usage_00044.pdb ----------- usage_00045.pdb 103 SNLCPSYDSAH 113 usage_00046.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################