################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:20 2021 # Report_file: c_1399_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00179.pdb # 2: usage_00180.pdb # 3: usage_00190.pdb # 4: usage_00195.pdb # 5: usage_00203.pdb # 6: usage_00209.pdb # 7: usage_00210.pdb # 8: usage_00549.pdb # 9: usage_01345.pdb # 10: usage_01346.pdb # 11: usage_01347.pdb # 12: usage_01348.pdb # 13: usage_01516.pdb # # Length: 91 # Identity: 45/ 91 ( 49.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 91 ( 50.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 91 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00179.pdb 1 -QEESQAARMIHSTAGLYNQFIKGLDSFSGKPR---------PALPIEAVILSLQDLIGY 50 usage_00180.pdb 1 ---ESQAARMIHSTAGLYNQFIKGLDSFSGKPRG---PPAG-PALPIEAVILSLQDLIGY 53 usage_00190.pdb 1 ---ESQAARMMHSTAGLYNQFIKGLDSFSGKPR------PP-PALPIEAVILSLQDLIGY 50 usage_00195.pdb 1 ---ESQAARMIHSTAGLYNQFIKGLDSFSGKP----------PALPIEAVILSLQDLIGY 47 usage_00203.pdb 1 -QEESQAARMIHSTAGLYNQFIKGLDSFSGKPP------AG-PALPIEAVILSLQDLIGY 52 usage_00209.pdb 1 -QEESQAARMIHSTAGLYNQFIKGLDSFSGKPR---------PALPIEAVILSLQDLIGY 50 usage_00210.pdb 1 QQEESQAARMIHSTAGLYNQFIKGLDSFSGKP-----------ALPIEAVILSLQDLIGY 49 usage_00549.pdb 1 -HEESRTARVIQSTVFLFNRFIRGLDALSK-----------TIDLPIESVSLSLQDLIGY 48 usage_01345.pdb 1 QQEESQAARMIHSTAGLYNQFIKGLDSFSGKPR-GSGPPAG-PALPIEAVILSLQDLIGY 58 usage_01346.pdb 1 QQEESQAARMIHSTAGLYNQFIKGLDSFSGKPR-GSGPPAG-PALPIEAVILSLQDLIGY 58 usage_01347.pdb 1 QQEESQAARMIHSTAGLYNQFIKGLDSFSGKPR-GSGPPAG-PALPIEAVILSLQDLIGY 58 usage_01348.pdb 1 QQEESQAARMIHSTAGLYNQFIKGLDSFSGKPR-GSGPPAG-PALPIEAVILSLQDLIGY 58 usage_01516.pdb 1 QHEESRTARVIRSTVFLFNRFIRGLDALSK------------IDLPIESVSLSLQDLIGY 48 ES AR i ST L N FI GLD S LPIE V LSLQDLIGY usage_00179.pdb 51 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 81 usage_00180.pdb 54 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 84 usage_00190.pdb 51 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 81 usage_00195.pdb 48 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 78 usage_00203.pdb 53 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 83 usage_00209.pdb 51 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 81 usage_00210.pdb 50 FEPP--------KQSKLRSLRNRQSLFQEEG 72 usage_00549.pdb 49 FHPPDEHLEHEDKQNRLRALKNRQNLFQEEG 79 usage_01345.pdb 59 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 89 usage_01346.pdb 59 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 89 usage_01347.pdb 59 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 89 usage_01348.pdb 59 FEPPSEELQHEEKQSKLRSLRNRQSLFQEEG 89 usage_01516.pdb 49 FHPPDEHLEHEDKQNRLRALKNRQNLFQEEG 79 F PP KQ LR L NRQ LFQEEG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################