################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:11 2021 # Report_file: c_1227_209.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00745.pdb # 2: usage_00858.pdb # 3: usage_00860.pdb # 4: usage_00861.pdb # 5: usage_00865.pdb # 6: usage_02109.pdb # 7: usage_02416.pdb # # Length: 35 # Identity: 1/ 35 ( 2.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 35 ( 11.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 35 ( 57.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00745.pdb 1 ---DVARSAD--RLEVRIADIESWLPRVLEAIDAG 30 usage_00858.pdb 1 DQAPVVDEAGVILGMVTLGNMLSSLLAG------- 28 usage_00860.pdb 1 NQAPVVDE---ILGMVTLGNMLSSLLAG------- 25 usage_00861.pdb 1 NQAPVVDEAGVILGMVTLGNMLSSLLAG------- 28 usage_00865.pdb 1 DQAPVVDEAGVILGMVTLGNMLSSLLAG------- 28 usage_02109.pdb 1 GCAPVVDQNGHLVGIITESDFLRG----------- 24 usage_02416.pdb 1 -NTVVND-DGVLTGHIT-DGTGYMRALK---EAG- 28 V d g t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################