################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:41 2021 # Report_file: c_1226_17.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00167.pdb # 2: usage_00626.pdb # 3: usage_00628.pdb # 4: usage_00653.pdb # 5: usage_00791.pdb # 6: usage_00816.pdb # 7: usage_01250.pdb # 8: usage_01356.pdb # # Length: 47 # Identity: 9/ 47 ( 19.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 47 ( 21.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 47 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00167.pdb 1 -D-YFETSSQCSKPGVIFLTK-RSRQVCADPSEEWVQKYVSDL---- 40 usage_00626.pdb 1 -D-YSETSPQCPKPGVILLTK-RGRQICADPNKKWVQKYISDLKL-- 42 usage_00628.pdb 1 AD-YFETSSQCSKPGVIFLTK-RSRQVCADPSEEWVQKYVSDLELS- 44 usage_00653.pdb 1 --HLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKAL--- 42 usage_00791.pdb 1 -D-YFETSSQCSKPGVIFLTK-RSRQVCADPSEEWVQKYVSDLELSA 44 usage_00816.pdb 1 AD-YFETSSQCSKPGVIFLTK-RSRQVCADPSEEWVQKYSDLELS-- 43 usage_01250.pdb 1 ---LKILNTPACALQIVARLKNNNRQVCIDPKLKWIQEYLEKA---- 40 usage_01356.pdb 1 AA-YFETSSQCSKPGVIFLTK-RSRQVCADPSEEWVQKYVSDLELSA 45 K RQvC DP W Q Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################