################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:54 2021 # Report_file: c_1298_176.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00342.pdb # 2: usage_00588.pdb # 3: usage_00639.pdb # 4: usage_00922.pdb # 5: usage_00962.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 65 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 65 ( 76.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 --TRKQIDEYGNFVKIYG--AKGLAYIKV-NER------------------AKGLEGINS 37 usage_00588.pdb 1 --CLPKLVD---------ERN-DYYVAVC-VL-KPGFENGSNQVLSFEYNPI-------- 38 usage_00639.pdb 1 LTPVAINEAAALVDTVFG--TTPRKTDHTR--------------VASAVF----SIPPIG 40 usage_00922.pdb 1 LTPVAINEGAAFVETVFG--GKPRATDHTK--------------VACAVF----SIPPIG 40 usage_00962.pdb 1 -ASVAAMQGRIAMYHALG--EGVSPIRLRT--------------VAATVF----TRPEIA 39 usage_00342.pdb 38 ---P- 38 usage_00588.pdb 39 ----G 39 usage_00639.pdb 41 TC--- 42 usage_00922.pdb 41 TC--- 42 usage_00962.pdb 40 AVG-- 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################