################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:21:03 2021 # Report_file: c_0076_10.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00107.pdb # 7: usage_00108.pdb # 8: usage_00109.pdb # 9: usage_00134.pdb # 10: usage_00142.pdb # # Length: 285 # Identity: 14/285 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/285 ( 14.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 176/285 ( 61.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00014.pdb 1 -------------------------SFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQR 35 usage_00015.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00016.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00017.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00107.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00108.pdb 1 VPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 60 usage_00109.pdb 1 ----------------------------------------------------------QY 2 usage_00134.pdb 1 --------------------------SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 34 usage_00142.pdb 1 -------------------------------------------------EDAGLEVLAST 11 usage_00013.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00014.pdb 36 APQLEELGTG-G-YTA-EVRPDVYS----GLSVA----LSGCKELRCLSGFWDAVPAYLP 84 usage_00015.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00016.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00017.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00107.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00108.pdb 61 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 106 usage_00109.pdb 3 CKQLKRLRIERG-ADEQ-GMED---EEGLVSQRGLIALAQGCQELEYMAVYVS------- 50 usage_00134.pdb 35 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 80 usage_00142.pdb 12 CKDLRELRVFPSEPFV--MEPN---V--ALTEQGLVSVSMGCPKLESVLYFCR------- 57 ck L eLr p g GC Le f usage_00013.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00014.pdb 85 AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL-DYI----------EDAGLE 133 usage_00015.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00016.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00017.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00107.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00108.pdb 107 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 149 usage_00109.pdb 51 -----------------DITNESLESIGTYLKNLCDFRLVLLDRE-ERIT-DLPLDNGVR 91 usage_00134.pdb 81 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 123 usage_00142.pdb 58 -----------------QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 100 tn L i pn rfrl lD G usage_00013.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00014.pdb 134 VLASTCKDLRELRV-F---PSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCR----- 184 usage_00015.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00016.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00017.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00107.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00108.pdb 150 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSV-------- 187 usage_00109.pdb 92 SLLIGCKKLRRFAFYLRQG-----------GLTDLGLSYIGQYSPNVRWMLLGY-VGESD 139 usage_00134.pdb 124 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 168 usage_00142.pdb 101 AIVEHCKDLRRLSL-S---G----------LLTDKVFEYIGTYAKKMEMLSVAF-AGDSD 145 CKdLRrl LTd yig y k e usage_00013.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00014.pdb --------------------------------------------- usage_00015.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00016.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00017.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00107.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00108.pdb --------------------------------------------- usage_00109.pdb 140 EGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQ- 183 usage_00134.pdb 169 LGMHHVLSGCDSLRKLEIRD------------------------- 188 usage_00142.pdb 146 LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSS 190 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################