################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:33:39 2021 # Report_file: c_0985_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00336.pdb # 4: usage_00435.pdb # 5: usage_00584.pdb # 6: usage_00675.pdb # 7: usage_00676.pdb # 8: usage_00677.pdb # 9: usage_00706.pdb # 10: usage_00707.pdb # 11: usage_00708.pdb # # Length: 91 # Identity: 88/ 91 ( 96.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 88/ 91 ( 96.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 91 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00040.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00336.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00435.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00584.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00675.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00676.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00677.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00706.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00707.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 usage_00708.pdb 1 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF 60 VYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF usage_00039.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00040.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00336.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00435.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVYVNH 91 usage_00584.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00675.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00676.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00677.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00706.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00707.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 usage_00708.pdb 61 EDIKKHATLVGAGFPFIKQIPDKLDIVY--- 88 EDIKKHATLVGAGFPFIKQIPDKLDIVY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################