################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:53 2021 # Report_file: c_1207_21.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00025.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00125.pdb # 6: usage_00325.pdb # 7: usage_00528.pdb # 8: usage_00533.pdb # 9: usage_00597.pdb # 10: usage_01105.pdb # 11: usage_01144.pdb # # Length: 36 # Identity: 0/ 36 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 36 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 36 ( 61.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 usage_00028.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 usage_00029.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 usage_00030.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 usage_00125.pdb 1 A----------TPLQQVASGRAGVFTQYHKKKKAMT 26 usage_00325.pdb 1 -PFQNIHPVTIGECPKYVKSTKL--RMA---T---- 26 usage_00528.pdb 1 -PFHNVSKYAFGNCPKYVGVKSL--KLA-------- 25 usage_00533.pdb 1 -TSRD--VPVGSGRKERVVMTLR--IR--------- 22 usage_00597.pdb 1 -YPEIIDPVTGEVLPDGSQGELV--FT-----S--- 25 usage_01105.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 usage_01144.pdb 1 -PFQNIHPVTIGECPKYVRSTKL--RMA-------- 25 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################