################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:27 2021 # Report_file: c_0986_61.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00261.pdb # 2: usage_00392.pdb # 3: usage_00393.pdb # 4: usage_00418.pdb # 5: usage_00419.pdb # 6: usage_00454.pdb # # Length: 64 # Identity: 1/ 64 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 64 ( 4.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 64 ( 31.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00261.pdb 1 -ELR----VRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIR 55 usage_00392.pdb 1 -----RIRR------DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLY 49 usage_00393.pdb 1 -----RIRR------DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLY 49 usage_00418.pdb 1 -----KVRF------QASVCYITFHRPEANNTINDTLIEECLQVLNQCETSTVT-VVVLE 48 usage_00419.pdb 1 -----KVRF------QASVCYITFHRPEANNTINDTLIEECLQVLNQCETSTVTVVV-LE 48 usage_00454.pdb 1 HMPEFKVDA------RGPIEIWTIDGESRRNAISRAMLKELGELVTRVSSSRDVRAVVIT 54 r N e usage_00261.pdb 56 -SEV 58 usage_00392.pdb ---- usage_00393.pdb ---- usage_00418.pdb 49 GL-- 50 usage_00419.pdb ---- usage_00454.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################