################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:47 2021 # Report_file: c_1392_16.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00164.pdb # 2: usage_00165.pdb # 3: usage_00166.pdb # 4: usage_00167.pdb # 5: usage_00169.pdb # 6: usage_00170.pdb # 7: usage_00171.pdb # 8: usage_00172.pdb # 9: usage_00173.pdb # 10: usage_00174.pdb # 11: usage_00666.pdb # 12: usage_00667.pdb # # Length: 74 # Identity: 48/ 74 ( 64.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 74 ( 64.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 74 ( 35.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00164.pdb 1 -LPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 59 usage_00165.pdb 1 -LPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 59 usage_00166.pdb 1 -LPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 59 usage_00167.pdb 1 ---------------LVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 45 usage_00169.pdb 1 -LPGLVNAATITLITLVGYSA-GGAVGAGGLGQIGYQYGYIGYNATV-NTVLVLLVILVY 57 usage_00170.pdb 1 -LPGLVNAATITLITLVGYSA-GGAVGAGGLGQIGYQYGYIGYNATV-NTVLVLLVILVY 57 usage_00171.pdb 1 ALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 60 usage_00172.pdb 1 -LPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 59 usage_00173.pdb 1 -LPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 59 usage_00174.pdb 1 ----LVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 56 usage_00666.pdb 1 ----LVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 56 usage_00667.pdb 1 ----LVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVY 56 LVGYSA GGAVGAGGLGQIGYQYGYIGYNATV NTVLVLLVILVY usage_00164.pdb 60 LIQFAGDRIVRAV- 72 usage_00165.pdb 60 LIQFAGDRIVRAV- 72 usage_00166.pdb 60 LIQFAGDRIVRAV- 72 usage_00167.pdb 46 LIQFAGDRIVRAV- 58 usage_00169.pdb 58 LIQFAGDRIVRAV- 70 usage_00170.pdb 58 LIQFAGDRIVRAVT 71 usage_00171.pdb 61 LIQFAGDRIVRA-- 72 usage_00172.pdb 60 LIQFAGDRIVRAV- 72 usage_00173.pdb 60 LIQFAGDRIVRAVT 73 usage_00174.pdb 57 LIQFAGDRIVRAVT 70 usage_00666.pdb 57 LIQFAGD------- 63 usage_00667.pdb 57 LIQFA--------- 61 LIQFA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################