################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:26 2021 # Report_file: c_1333_33.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00132.pdb # 2: usage_00133.pdb # 3: usage_00134.pdb # 4: usage_00188.pdb # 5: usage_00189.pdb # 6: usage_00190.pdb # 7: usage_00216.pdb # 8: usage_00754.pdb # 9: usage_00807.pdb # 10: usage_00810.pdb # 11: usage_00811.pdb # 12: usage_00816.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 63 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 63 ( 57.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 --NYQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 41 usage_00133.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 40 usage_00134.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 40 usage_00188.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 40 usage_00189.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 40 usage_00190.pdb 1 --NYQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-HAAQNAKRWA 41 usage_00216.pdb 1 ---QQWLDDARELLNRQAL---------Q------A-------GRQLSA-AEVSQRLAQA 34 usage_00754.pdb 1 NEDFIKDCVRIHNKFRSE----------V------KPTASDMLYMTWDP-ALAQIAKAWA 43 usage_00807.pdb 1 Y-IEKVDGLAAAVN-----VHATPTVRVN------GTEYEW-----STPAALVAKIKEIV 43 usage_00810.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-RAAQNAKRWA 40 usage_00811.pdb 1 ---YQKEIVDKHNALRRS----------V------KPTARNMLQMKWNS-RAAQNAKRWA 40 usage_00816.pdb 1 --EHRNEILSKINDVRDH----------VAKGSWGLPVAARMKVVVWDA-ELAGLAKRHT 47 k usage_00132.pdb 42 DRC 44 usage_00133.pdb 41 DR- 42 usage_00134.pdb 41 DRC 43 usage_00188.pdb 41 DRC 43 usage_00189.pdb 41 DR- 42 usage_00190.pdb 42 DRC 44 usage_00216.pdb 35 G-- 35 usage_00754.pdb 44 SNC 46 usage_00807.pdb 44 G-- 44 usage_00810.pdb 41 NR- 42 usage_00811.pdb 41 NR- 42 usage_00816.pdb 48 K-- 48 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################