################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:09 2021 # Report_file: c_1434_437.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00237.pdb # 2: usage_00404.pdb # 3: usage_00472.pdb # 4: usage_01347.pdb # 5: usage_02829.pdb # # Length: 115 # Identity: 9/115 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/115 ( 16.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/115 ( 34.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00237.pdb 1 -----------PGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADAR 49 usage_00404.pdb 1 -GFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAA 59 usage_00472.pdb 1 --------------PVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMA 46 usage_01347.pdb 1 RGFAALMSAYNAQRVGAGAVALGIAQCAFEEGVAYLKRREQFGRPLAEFQGLQWMVADMS 60 usage_02829.pdb 1 --------------TSVAAASLGFARRALQEGLARAASRKMFGQTLGDFQLTQTKLAQMA 46 aa G a Al R FG l A usage_00237.pdb 50 IAINQTRLLVLHAAWLLDTVGIM-G--ALSAVSEIKV------------------ 83 usage_00404.pdb 60 TELEAARLLYLKAAELKDAG---RP--FTLEAAQAKLFASEAAVKACDEAIQILG 109 usage_00472.pdb 47 MKVELARMSYQRAAWEVDSG---RR--NTYYASIAKAFAGDIANQLATDAVQILG 96 usage_01347.pdb 61 VQLEAARLMLRSAAVSGET------FPDINKAAQAKIFAAETANKVTNDALQFFG 109 usage_02829.pdb 47 LTIDSSALLVYRAAWLRDQG---EN--VTREAAMAKWHASEGAQQVIDAAVQLWG 96 rl AA d a aK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################