################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:22 2021 # Report_file: c_1332_57.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00031.pdb # 2: usage_00052.pdb # 3: usage_00306.pdb # 4: usage_00315.pdb # 5: usage_00333.pdb # 6: usage_00334.pdb # 7: usage_00339.pdb # 8: usage_00743.pdb # 9: usage_00812.pdb # 10: usage_00813.pdb # 11: usage_00899.pdb # 12: usage_00912.pdb # 13: usage_00915.pdb # 14: usage_00919.pdb # # Length: 41 # Identity: 24/ 41 ( 58.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 41 ( 61.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 41 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII------- 34 usage_00052.pdb 1 NKRKDTKEIYTHFTCSTDTKNVQFVFDAVTDVIIK------ 35 usage_00306.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVI-------- 33 usage_00315.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK------ 35 usage_00333.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN----- 36 usage_00334.pdb 1 NMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENL--- 38 usage_00339.pdb 1 NMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIII------- 34 usage_00743.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN----- 36 usage_00812.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK------ 35 usage_00813.pdb 1 NRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKEC 41 usage_00899.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN----- 36 usage_00912.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK------ 35 usage_00915.pdb 1 NMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKE----- 36 usage_00919.pdb 1 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN----- 36 N R D KEIY H TCaTDT NV FVFDAVTD I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################