################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:43 2021 # Report_file: c_0892_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00100.pdb # 2: usage_00101.pdb # 3: usage_00105.pdb # 4: usage_00107.pdb # 5: usage_00108.pdb # 6: usage_00121.pdb # 7: usage_00194.pdb # 8: usage_00195.pdb # 9: usage_00222.pdb # # Length: 94 # Identity: 10/ 94 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 94 ( 48.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 94 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00100.pdb 1 TELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 53 usage_00101.pdb 1 TELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 53 usage_00105.pdb 1 TELEKAVIVLVENFYKYVSKY-SLVKNKISKSSFREMLQKELNHMLSD-TGNRK-AADKL 57 usage_00107.pdb 1 -ELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 52 usage_00108.pdb 1 -ELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 52 usage_00121.pdb 1 SDVERAIETLIKNFHQYSV-EG-GK-ETLTPSELRDLVTQQLPHLMPSN-----CGLEEK 52 usage_00194.pdb 1 -ELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 52 usage_00195.pdb 1 TELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 53 usage_00222.pdb 1 TELEESIETVVTTFFTFARQE-GRK-DSLSVNEFKELVTQQLPHLLKD-V----GSLDEK 53 elE iet v F e k ls ef elvtqqLpHll d ldek usage_00100.pdb 54 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRK-K- 84 usage_00101.pdb 54 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRK-K- 84 usage_00105.pdb 58 IQNLDANH-DGRISFDEYWTLIGGITGPIA---- 86 usage_00107.pdb 53 MKSLDVNQ-DSELKFNEYWRLIGELAKEIR---- 81 usage_00108.pdb 53 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRK-K- 83 usage_00121.pdb 53 IANLGSCND-SKLEFRSFWELIGEAAKSV----- 80 usage_00194.pdb 53 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRK--- 82 usage_00195.pdb 54 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRKKKD 86 usage_00222.pdb 54 MKSLDVNQ-DSELKFNEYWRLIGELAKEIRK-K- 84 Ld n s l F eyW LIGe ak i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################