################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:31 2021 # Report_file: c_0194_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00256.pdb # 2: usage_00257.pdb # 3: usage_00258.pdb # 4: usage_00259.pdb # 5: usage_00362.pdb # 6: usage_00602.pdb # 7: usage_00603.pdb # 8: usage_00626.pdb # # Length: 211 # Identity: 14/211 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 125/211 ( 59.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 72/211 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00256.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFY----SGQEVNEAACDIARQVADEGDALVAG 51 usage_00257.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFY----SGQEVNEAACDIARQVADEGDALVAG 51 usage_00258.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFY-KI-SGQEVNEAACDIARQVADEGDALVAG 53 usage_00259.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFY----SGQEVNEAACDIARQVADEGDALVAG 51 usage_00362.pdb 1 -ETEVKKVFLQQLEVFMKKNVDFLIAEYFE---------HVEEAVWAVETLIASGKPVAA 50 usage_00602.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFYA--SSGQKVNEAACDIARQVADEGDALVAG 53 usage_00603.pdb 1 -PEAVRQLHREFLRAG----SNVMQTFTFYAKI-SGQKVNEAACDIARQVADEGDALVAG 54 usage_00626.pdb 1 HPEAVRQLHREFLRAG----SNVMQTFT----------VNEAAADIARQVADEGDALVAG 46 peaVrqlhrefLrag snvmqtft neaa diArqvadegdalVAg usage_00256.pdb 52 GVSQTP--------KSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA- 102 usage_00257.pdb 52 GVSQTP---------SETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA- 101 usage_00258.pdb 54 GVSQTPS--Y-LSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA- 109 usage_00259.pdb 52 GVSQTPS--Y-LSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA- 107 usage_00362.pdb 51 TMAIGP-EG-DLHGV-------PPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEG 101 usage_00602.pdb 54 GVSQTP---SYLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALKT- 109 usage_00603.pdb 55 GVSQTP---SYLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALKT- 110 usage_00626.pdb 47 GVSQTP---SYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA- 102 gvsqtP f qqlevfmKknvdfliaeyfehveeavwaVe l usage_00256.pdb 103 S-----GKPVAATMCI-GP-EG--DLH---------------GV---PPGECAVRLVKAG 135 usage_00257.pdb 102 S-----GKPVAATMCI-GP-EG--DLH---------------GV---PPGECAVRLVKAG 134 usage_00258.pdb 110 S-----GKPVAATMCI-GP-EG--DLH---------------GV---PPGECAVRLVKAG 142 usage_00259.pdb 108 S-----GKPVAATMCI-GP-EG--DLH---------------GV---PPGECAVRLVKAG 140 usage_00362.pdb 102 LEAAQLKAHLMSQPLAYHTPDANK--QGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLG 159 usage_00602.pdb 110 S-----GKPIAATMCI-GP-EG--DLH---------------GV---SPGECAVRLVKAG 142 usage_00603.pdb 111 S-----GKPIAATMCI-GP-EG--DLH---------------GV---SPGECAVRLVKAG 143 usage_00626.pdb 103 S-----GKPVAATMAI-GP-EG--DLH---------------GV---PPGEAAVRLVKAG 135 s gkp aatm i gp eg h gv pge AvrlvkaG usage_00256.pdb 136 ASIIGVNCHFDPTIS-LKTVKLMKEGLEAAQ 165 usage_00257.pdb 135 ASIIGVNCHFDPTIS-LKTVKLMKEGLEAAQ 164 usage_00258.pdb 143 ASIIGVNCHFDPTIS-LKTVKLMKEGLEAAQ 172 usage_00259.pdb 141 ASIIGVNCHFDPTIS-LKTVKLMKEGLEAAQ 170 usage_00362.pdb 160 VRYIGGCC-G----FEPYHIRAIAEEL---- 181 usage_00602.pdb 143 AAIVGVNCHFDPSTS-LQTIKLMKEGLEAAR 172 usage_00603.pdb 144 AAIVGVNCHFDPSTS-LQTIKLMKEGLEAAR 173 usage_00626.pdb 136 ASIIGVNCHFDPTIS-LKTVKLMKEGLEAAQ 165 a i GvnC f s l t klmkEgL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################