################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:03 2021 # Report_file: c_0141_21.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00170.pdb # 2: usage_00171.pdb # 3: usage_00224.pdb # 4: usage_00225.pdb # 5: usage_00226.pdb # 6: usage_00227.pdb # 7: usage_00228.pdb # 8: usage_00229.pdb # # Length: 142 # Identity: 44/142 ( 31.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/142 ( 31.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/142 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00170.pdb 1 --------LAEKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDR-KEIT 51 usage_00171.pdb 1 --------LAEKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDR-KEIT 51 usage_00224.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 usage_00225.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 usage_00226.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 usage_00227.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 usage_00228.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 usage_00229.pdb 1 GVRNFLAE--AKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 58 K GV G V DLP A A V L P P R K I usage_00170.pdb 52 KASEGFVYLVSV-NG----VTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQ 106 usage_00171.pdb 52 KASEGFVYLVSV-NG----VTGP---VNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQ 103 usage_00224.pdb 59 DMTTGFVYLVSLY-----------EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVS 107 usage_00225.pdb 59 DMTTGFVYLVSLY------------EIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVS 106 usage_00226.pdb 59 DMTTGFVYLVSLYGTTGAR-----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVS 113 usage_00227.pdb 59 DMTTGFVYLVSLY-----------EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVS 107 usage_00228.pdb 59 DMTTGFVYLVSLYG----R-----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVS 109 usage_00229.pdb 59 DMTTGFVYLVS-------------------AYDLLRRAKRICRNKVAVGFGVSKREHVVS 99 GFVYLVS L K VAVGFG SK EHV usage_00170.pdb 107 IAQWGADGVIIGSAVRQL---- 124 usage_00171.pdb 104 IAQWGADGVIIGSAVRQL---- 121 usage_00224.pdb 108 LLKEGANGVVVGSALVKIIGEK 129 usage_00225.pdb 107 LLKEGANGVVVGSALVKIIGEK 128 usage_00226.pdb 114 LLKEGANGVVVGSALVKIIGEK 135 usage_00227.pdb 108 LLKEGANGVVVGSALVKIIGEK 129 usage_00228.pdb 110 LLKEGANGVVVGSALVKIIGEK 131 usage_00229.pdb 100 LLKEGANGVVVGSALVKIIGEK 121 GA GV GSA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################