################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:34 2021 # Report_file: c_0900_91.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00016.pdb # 4: usage_00142.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00287.pdb # 8: usage_00454.pdb # 9: usage_00542.pdb # 10: usage_00840.pdb # 11: usage_00896.pdb # 12: usage_00904.pdb # 13: usage_01007.pdb # # Length: 52 # Identity: 3/ 52 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 52 ( 23.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 52 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 -FSGSGS--GTDFTLEISRVKAEDVGVYYCQQFVEYPFTFGSGTKLEI---- 45 usage_00010.pdb 1 -FSGSGS--GTDFTLEISRVKAEDVGVYYCQQFVEYPFTFGSGTKL------ 43 usage_00016.pdb 1 -LFSAMRDTNNKYVLTLNKFSKENEGYYFCSVISNSVMYFSSVVPVLQKVSS 51 usage_00142.pdb 1 -FSGSGS--GTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEI---- 45 usage_00265.pdb 1 -FSGSGS--GTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKL------- 42 usage_00266.pdb 1 RFSGSGS--GTDFTLKISRVEAEDVGVYYCLQGTHYPVLFGQGTRLEI---- 46 usage_00287.pdb 1 -FSSSGS--GTDFTLRINTVEAEDVGVYYCAQNLELPPTFG----------- 38 usage_00454.pdb 1 -FSGSGS--GTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDV---- 45 usage_00542.pdb 1 -FSGSGS--GTDFTLTI-----EDFATYYCQQDGYYPATFG----------- 33 usage_00840.pdb 1 -FSGSGS--GTDFTLKISSVEAEDLGVFYCFQGSRVPLTFGAGTKLEL---- 45 usage_00896.pdb 1 -FSSSGS--GTDFTLRISRVEAEDVGIYYCAHNVELPRTFG----------- 38 usage_00904.pdb 1 -FSGSGS--GTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEI----- 44 usage_01007.pdb 1 RFTGSGS--GTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIK-RA- 48 f sgs gt L i Ed y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################