################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:20 2021 # Report_file: c_0609_123.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00466.pdb # 2: usage_00571.pdb # 3: usage_00863.pdb # # Length: 72 # Identity: 22/ 72 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 72 ( 65.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 72 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00466.pdb 1 ------APAYKKDTGVDLKWVAVGTGNALKLGENCDVDVVFVHAPKVELEYVEKGFGIDR 54 usage_00571.pdb 1 GLLDYLLPQFEKDTGYKVDVIAAGTGKALK-GENGDVDLV-THAPKAEGTFVEKGYGVLP 58 usage_00863.pdb 1 --LKVLLPPFEKKNNVKVDVIAVGTGQALKLGEAGDVDVVFVHARKLEDKFVADGFGVNR 58 lP feKdtgvkvdviAvGTG ALK GEngDVDvV vHApK E fVekGfGv r usage_00466.pdb 55 TPV--------- 57 usage_00571.pdb 59 RKLYNDFVIVGP 70 usage_00863.pdb 59 KDV--------- 61 v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################