################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:04 2021 # Report_file: c_0462_110.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00392.pdb # 2: usage_00683.pdb # 3: usage_00684.pdb # 4: usage_00789.pdb # # Length: 91 # Identity: 6/ 91 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 91 ( 40.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 91 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00392.pdb 1 RIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKE-N-IDFV 58 usage_00683.pdb 1 KAVTVTWKYAAGEE-VSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASL-K-PDCV 57 usage_00684.pdb 1 KAVTVTWKYAAGEE-VSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASL-K-PDCV 57 usage_00789.pdb 1 --VLHAADYAAGHE-EAAFRSRFEQAGGEIVDEVVAPIGTQDFGPYLQRIEQAAAEADAV 57 v v kyaaGee f f g gevV i F la i D V usage_00392.pdb 59 YYGGY-HPEMGQILRQARAAGL--KTQFMGP 86 usage_00683.pdb 58 YAFFS-GGGALKFIKDYAAANL--GIPLWGP 85 usage_00684.pdb 58 YAFFS-GGGALKFIKDYAAANL--GIPLWGP 85 usage_00789.pdb 58 FAFHGTSTDAIRFLVQYQEFGLKDSIPLIPS 88 yaf a f y aa L ipl gp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################