################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:22 2021 # Report_file: c_1462_240.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00409.pdb # 2: usage_00410.pdb # 3: usage_00535.pdb # 4: usage_00634.pdb # 5: usage_00635.pdb # 6: usage_00636.pdb # 7: usage_00639.pdb # 8: usage_00666.pdb # 9: usage_00668.pdb # 10: usage_01726.pdb # 11: usage_01727.pdb # # Length: 16 # Identity: 1/ 16 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 16 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 16 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00409.pdb 1 VA----VGTPEEVAEV 12 usage_00410.pdb 1 VA----VGTPEEVAEV 12 usage_00535.pdb 1 TF----YPSPKMAMKA 12 usage_00634.pdb 1 VA----QGTPAEVAQA 12 usage_00635.pdb 1 VA----QGTPAEVAQA 12 usage_00636.pdb 1 VA----QGTPAEVAQA 12 usage_00639.pdb 1 VA----QGTPAEVAQA 12 usage_00666.pdb 1 VA----VGTPEEVAEV 12 usage_00668.pdb 1 VA----VGTPEEVAEV 12 usage_01726.pdb 1 --DIIESDRPIEVAEA 14 usage_01727.pdb 1 --DIIESDRPIEVAEA 14 P eva #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################