################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:40 2021 # Report_file: c_0884_12.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00034.pdb # 2: usage_00096.pdb # 3: usage_00143.pdb # 4: usage_00144.pdb # 5: usage_00146.pdb # 6: usage_00152.pdb # 7: usage_00153.pdb # 8: usage_00172.pdb # 9: usage_00173.pdb # 10: usage_00174.pdb # # Length: 85 # Identity: 7/ 85 ( 8.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 85 ( 21.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 85 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 -VTDAIKAAQAAEEAFK-TWKDVGPSERRRLLLKVADVMESKTPKFIEVMAMEVGAS--- 55 usage_00096.pdb 1 --DETRAAIDAANRALP-AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKP--- 54 usage_00143.pdb 1 EAADVDLAVAAAKRAFP-AWSALGAAERGRLLLKLADRIEECSEELAQLESLNTGHPIRD 59 usage_00144.pdb 1 EAADVDLAVAAAKRAFP-AWSALGAAERGRLLLKLADRIEECSEELAQLESLNTGHPIRD 59 usage_00146.pdb 1 DAKQVNEAVVAAQNALKGPWGKLSVQDRAALIHKIADGIQARFEEFVAAEVADTGRPVHQ 60 usage_00152.pdb 1 -AADVDLAVDAATRAFP-AWSAMPAAERGRLLLRLADAIEANTEALAQLESLDTGHPIRD 58 usage_00153.pdb 1 -AADVDLAVDAATRAFP-AWSAMPAAERGRLLLRLADAIEANTEALAQLESLDTGHPIRD 58 usage_00172.pdb 1 -AADVDLAVAAAKRAFP-AWSALGAAERGRLLLKLADRIEECSEELAQLESLNTGHPIRD 58 usage_00173.pdb 1 -AADVDLAVAAAKRAFP-AWSALGAAERGRLLLKLADRIEECSEELAQLESLNTGHPIRD 58 usage_00174.pdb 1 -AADVDLAVAAAKRAFP-AWSALGAAERGRLLLKLADRIEECSEELAQLESLNTGHPIRD 58 A AA A W eR ll ad G p usage_00034.pdb 56 ALWAGFNVHASANVFREAASLATQI 80 usage_00096.pdb 55 LAEAKGEISYAASFIEWFAEEGKRI 79 usage_00143.pdb 60 --SRGLDVPRTAACFRYFGGMADKI 82 usage_00144.pdb 60 --SRGLDVPRTAACFRYFGGMADKI 82 usage_00146.pdb 61 --ARTLDIPRAIANFRTFADLAKT- 82 usage_00152.pdb 59 --SRALDVPRTAACFRYFGGMADKL 81 usage_00153.pdb 59 --SRALDVPRTAACFRYFGGMADKL 81 usage_00172.pdb 59 --SRGLDVPRTAACFRYFGGMADKI 81 usage_00173.pdb 59 --SRGLDVPRTAACFRYFGGMADKI 81 usage_00174.pdb 59 --SRGLDVPRTAACFRYFGGMADKI 81 a fr f a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################