################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:58 2021 # Report_file: c_1262_125.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00072.pdb # 2: usage_00073.pdb # 3: usage_00596.pdb # 4: usage_00598.pdb # 5: usage_00729.pdb # 6: usage_00739.pdb # 7: usage_00879.pdb # 8: usage_01847.pdb # 9: usage_01854.pdb # # Length: 37 # Identity: 3/ 37 ( 8.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 37 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 37 ( 45.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 ---KLAG-MTGTAQT---EAAELHEIYK----LGVVS 26 usage_00073.pdb 1 -D-KLAG-MTGTAQT---EAAELHEIYK----LGVVS 27 usage_00596.pdb 1 --EKLAG--TGTADT---EAFEFSSIYK----LDTVV 26 usage_00598.pdb 1 -E-KLAG-MTGTADT---EAFEFSSIYK----LDTVV 27 usage_00729.pdb 1 -E-KLAG-MTGTAKT---EEEEFRNIYN----MQVVT 27 usage_00739.pdb 1 ---KLAG-MTGTAKT---EEEEFRNIYN----MQVVT 26 usage_00879.pdb 1 -E-KLAG-MTGTAKT---EEEEFRNIYN----MQVVT 27 usage_01847.pdb 1 -D-KLAG-MTGTAQT---EAAELHEIYK----LGVVS 27 usage_01854.pdb 1 TP-VLAGVNGT----DPFV-STFLRELKEIGFAGVQN 31 kLAG tg e e iy v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################