################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:20:30 2021 # Report_file: c_0159_2.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00025.pdb # 6: usage_00026.pdb # 7: usage_00027.pdb # 8: usage_00028.pdb # 9: usage_00029.pdb # 10: usage_00030.pdb # 11: usage_00031.pdb # 12: usage_00032.pdb # 13: usage_00035.pdb # 14: usage_00036.pdb # 15: usage_00037.pdb # 16: usage_00038.pdb # 17: usage_00054.pdb # 18: usage_00095.pdb # 19: usage_00096.pdb # 20: usage_00105.pdb # # Length: 206 # Identity: 145/206 ( 70.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 145/206 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/206 ( 7.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 GPIVVDPLTRIEGHLRIEVEVEGGVIKEARSCATLFRGIETILKGRDPRDAQHFTQRTCG 60 usage_00003.pdb 1 GPIVVDPLTRIEGHLRIEVEVEGGVIKEARSCATLFRGIETILKGRDPRDAQHFTQRTCG 60 usage_00019.pdb 1 -PIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 59 usage_00020.pdb 1 -------------HLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 47 usage_00025.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00026.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00027.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00028.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00029.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00030.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00031.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00032.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00035.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00036.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00037.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00038.pdb 1 -------------HLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 47 usage_00054.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00095.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00096.pdb 1 GPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 60 usage_00105.pdb 1 -------------HLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCG 47 HLRIEVEVE G K A S TLFRG E ILKGRDPRDAQHFTQRTCG usage_00002.pdb 61 VCTYTHALASTRCLEDAINKPIPANATYIRNLVLGNQFMHDHLVHFYHLHALDFVDVTSA 120 usage_00003.pdb 61 VCTYTHALASTRCLEDAINKPIPANATYIRNLVLGNQFMHDHLVHFYHLHALDFVDVTSA 120 usage_00019.pdb 60 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 119 usage_00020.pdb 48 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 107 usage_00025.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00026.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00027.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00028.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00029.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00030.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00031.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00032.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00035.pdb 61 V-TYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 119 usage_00036.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00037.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00038.pdb 48 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 107 usage_00054.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00095.pdb 61 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 120 usage_00096.pdb 61 V-TYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 119 usage_00105.pdb 48 VCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAA 107 V TYTHALASTRC A IP NATYIRNLVLG Q HDH VHFYHLHALDFVDVT A usage_00002.pdb 121 LLADPAKAAKLANSISPRKATTEEFAAVQAKLKTFVASGQLGPFTNAYFLGGHEGYYMDP 180 usage_00003.pdb 121 LLADPAKAAKLANSISPRKATTEEFAAVQAKLKTFVASGQLGPFTNAYFLGGHEGYYMDP 180 usage_00019.pdb 120 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 179 usage_00020.pdb 108 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 167 usage_00025.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00026.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00027.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00028.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00029.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00030.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00031.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00032.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00035.pdb 120 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 179 usage_00036.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00037.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00038.pdb 108 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 167 usage_00054.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVESGQLGPFTNAYFLGGHPAYYLDP 180 usage_00095.pdb 121 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 180 usage_00096.pdb 120 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDP 179 usage_00105.pdb 108 LKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVESGQLGPFTNAYFLGGHPAYYLDP 167 L ADPAKAAK A SISPRK T AVQ KLKTFV GQLGPFTNAYFLGGH YY DP usage_00002.pdb 181 EANLVCTAHYLQALRAQVEVAKGMAV 206 usage_00003.pdb 181 EANLVCTAHYLQALRAQVEVAKGMA- 205 usage_00019.pdb 180 ETNLIATAHYLEALRLQVKAARAMAV 205 usage_00020.pdb 168 ETNLIATAHYLEALRLQVKAARAMAV 193 usage_00025.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00026.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00027.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00028.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00029.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00030.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00031.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00032.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00035.pdb 180 ETNLIATAHYLEALRLQVKAARAMAV 205 usage_00036.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00037.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00038.pdb 168 ETNLIATAHYLEALRLQVKAARAMAV 193 usage_00054.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00095.pdb 181 ETNLIATAHYLEALRLQVKAARAMAV 206 usage_00096.pdb 180 ETNLIATAHYLEALRLQVKAARAMAV 205 usage_00105.pdb 168 ETNLIATAHYLEALRLQVKAARAMAV 193 E NL TAHYL ALR QV A MA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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