################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:01:55 2021 # Report_file: c_0212_13.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00077.pdb # 4: usage_00082.pdb # 5: usage_00083.pdb # 6: usage_00137.pdb # 7: usage_00138.pdb # 8: usage_00139.pdb # 9: usage_00140.pdb # 10: usage_00223.pdb # 11: usage_00224.pdb # 12: usage_00255.pdb # 13: usage_00256.pdb # 14: usage_00288.pdb # 15: usage_00320.pdb # 16: usage_00352.pdb # 17: usage_00353.pdb # 18: usage_00354.pdb # # Length: 106 # Identity: 41/106 ( 38.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/106 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/106 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 VTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDD-VKR 59 usage_00002.pdb 1 VTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDD-VKR 59 usage_00077.pdb 1 VTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGEGLEWLADIWWND-KKY 59 usage_00082.pdb 1 VTLKESGPGILQPSQTLSLTCSFSGFSLSTSNMGVVWIRQPSGKGLEWLLHILWND-GKF 59 usage_00083.pdb 1 VTLKESGPGILQPSQTLSLTCSFSGFSLSTSNMGVVWIRQPSGKGLEWLLHILWND-GKF 59 usage_00137.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00138.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00139.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00140.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00223.pdb 1 VTLKESGPVLVKPTETLTLTCTVSGFSLSTYGMGVGWIRQPPGKALEWLAHIWWDD-VKR 59 usage_00224.pdb 1 -TLKESGPVLVKPTETLTLTCTVSGFSLSTYGMGVGWIRQPPGKALEWLAHIWWDD-VKR 58 usage_00255.pdb 1 VTLKESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDD-DKR 59 usage_00256.pdb 1 VTLKESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDD-DKR 59 usage_00288.pdb 1 ITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDD-DKR 59 usage_00320.pdb 1 --LRESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYY 58 usage_00352.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00353.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 usage_00354.pdb 1 VKLQESGPGKLQPSQTLSLTCSFSGFSLTTSGIGVGWIRQPSGKGLEWLAHIWWSA-SKY 59 L ESGP P TL LTC SGFS t gV WIRQP Gk LEWL I w k usage_00001.pdb 60 YS--PALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSV- 102 usage_00002.pdb 60 YS--PALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSV- 102 usage_00077.pdb 60 YN--PSLKSRLTVSKDTSSNQVFLKITSVDTSDTATYHCARRTFSY 103 usage_00082.pdb 60 YN--PALKSRLTISKDTYNNQVFLKIANVDTADTATYYCARLFTT- 102 usage_00083.pdb 60 YN--PALKSRLTISKDTYNNQVFLKIANVDTADTATYYCARLFTT- 102 usage_00137.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 usage_00138.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYYG- 102 usage_00139.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 usage_00140.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 usage_00223.pdb 60 YN--PALKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARMGS-- 101 usage_00224.pdb 59 YN--PALKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARMGS-- 100 usage_00255.pdb 60 YN--PSLESRLTISKDTSRDMVFMKITSVDTADTATYYCAR----- 98 usage_00256.pdb 60 YN--PSLESRLTISKDTSRDMVFMKITSVDTADTATYYCAR----- 98 usage_00288.pdb 60 YS--PSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGP- 102 usage_00320.pdb 59 ITYSSSLKTRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTL--- 101 usage_00352.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 usage_00353.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 usage_00354.pdb 60 YN--TALKSRLTISKDTSNNQVFLKIASVDTADTATYYCARAYY-- 101 y L RLTisKDT d DTATY CAr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################