################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:39 2021 # Report_file: c_0545_67.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00052.pdb # 2: usage_00398.pdb # 3: usage_00399.pdb # 4: usage_00400.pdb # 5: usage_00401.pdb # 6: usage_00402.pdb # 7: usage_00403.pdb # 8: usage_00423.pdb # # Length: 139 # Identity: 32/139 ( 23.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/139 ( 86.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/139 ( 13.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00398.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00399.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00400.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00401.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00402.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00403.pdb 1 MHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPI--QVTEDEVLDI 58 usage_00423.pdb 1 -QGYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAG---------DPRSSPLIQFNL 50 haYtvqrlykAilgdysqqpLVqVaawciGEyGdLlvs qvtedevldi usage_00052.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00398.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00399.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00400.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00401.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00402.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00403.pdb 59 LESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSI--YGSSIDVELQQRAVEY 116 usage_00423.pdb 51 LHSKFH-L-CSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEY 108 LeSvli n stsvTRgyaLtaimKlstrFtctvnrIkkVvsi ygssiDVELQQRAVEY usage_00052.pdb 117 NALFKKYDH-MRSALLE-- 132 usage_00398.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00399.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00400.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00401.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00402.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00403.pdb 117 NALFKKYDH-MRSALLERM 134 usage_00423.pdb 109 LRLSTVASTDILATVLE-- 125 naLfkkydh mrsalLE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################