################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:26 2021 # Report_file: c_1197_18.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00017.pdb # 2: usage_00332.pdb # 3: usage_00728.pdb # 4: usage_00729.pdb # 5: usage_00730.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 44 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 44 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 ---AGTMPGKNVP------------G-ENWGP---SLYCAVIVK 25 usage_00332.pdb 1 --TVKSPGRVNLIGEHTDYTYGYVPA-IDLYT---IIT------ 32 usage_00728.pdb 1 -LAVSAPGRVNLIGEHTDYNQGLVLPALELTVLVG--------- 34 usage_00729.pdb 1 ELAVSAPGRVNLIGEHTDYNQGLVLPALELTVLVG--------- 35 usage_00730.pdb 1 ELAVSAPGRVNLIGEHTDYNQGLVLPALELTVLVG--------- 35 v pgrvNli l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################