################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:03 2021 # Report_file: c_0104_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00059.pdb # 4: usage_00060.pdb # 5: usage_00061.pdb # 6: usage_00062.pdb # # Length: 206 # Identity: 137/206 ( 66.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 137/206 ( 66.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/206 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 GTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRC 60 usage_00021.pdb 1 GTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRC 60 usage_00059.pdb 1 AANEILEVVEDYRVAAINAIEAGFDGIEIHGAHGYLLDQFMKDGINDRTDEYGGSLENRC 60 usage_00060.pdb 1 AANEILEVVEDYRVAAINAIEAGFDGIEIHGAHGYLLDQFMKDGINDRTDEYGGSLENRC 60 usage_00061.pdb 1 AANEILEVVEDYRVAAINAIEAGFDGIEIHGAHGYLLDQFMKDGINDRTDEYGGSLENRC 60 usage_00062.pdb 1 AANEILEVVEDYRVAAINAIEAGFDGIEIHGAHGYLLDQFMKDGINDRTDEYGGSLENRC 60 EI VVEDYR A NAIEAGFDGIEIHGAHGYL DQF KDGINDRTDEYGGSL NRC usage_00020.pdb 61 KFITQVVQAVVSAIGADRVGVRVSPAIDYLDAMDSNPLSLGLAVVERLNKIQLHSGSKLA 120 usage_00021.pdb 61 KFITQVVQAVVSAIGADRVGVRVSPAIDYLDAMDSNPLSLGLAVVERLNKIQLHSGSKLA 120 usage_00059.pdb 61 KFILQVVQAVSAAIGTDRVGIRISPAIDHTDAMDSDPRSLGLAVIERLNKLQFKLGSRLA 120 usage_00060.pdb 61 KFILQVVQAVSAAIGTDRVGIRISPAIDHTDAMDSDPRSLGLAVIERLNKLQFKLGSRLA 120 usage_00061.pdb 61 KFILQVVQAVSAAIGTDRVGIRISPA----DAMDSDPRSLGLAVIERLNKLQFKLGSRLA 116 usage_00062.pdb 61 KFILQVVQAVSAAIGTDRVGIRISPAIDHTDAMDSDPRSLGLAVIERLNKLQFKLGSRLA 120 KFI QVVQAV AIG DRVG R SPA DAMDS P SLGLAV ERLNK Q GS LA usage_00020.pdb 121 YLHVTQPR---------------LGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAV 165 usage_00021.pdb 121 YLHVTQPR---------------LGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAV 165 usage_00059.pdb 121 YLHVTQPR--YTADGHGQ-TE-----EEEVAQLMKTWRGAYVGTFICCGGYTRELGLQAV 172 usage_00060.pdb 121 YLHVTQPRYT----------------EEEVAQLMKTWRGAYVGTFICCGGYTRELGLQAV 164 usage_00061.pdb 117 YLHVTQPR--YTADGHGQ-TEAGNGSEEEVAQLMKTWRGAYVGTFICCGGYTRELGLQAV 173 usage_00062.pdb 121 YLHVTQPR--YTADGHGQT-----GSEEEVAQLMKTWRGAYVGTFICCGGYTRELGLQAV 173 YLHVTQPR EEE A LM T R AY GTFIC GGYTRELG AV usage_00020.pdb 166 AQGDADLVSYGRLFISNPDLVMRIKL 191 usage_00021.pdb 166 AQGDADLVSYGRLFISNPDLVMRIKL 191 usage_00059.pdb 173 AQGDADLVAFGRYFVSN--------- 189 usage_00060.pdb 165 AQGDADLVAFGRYFVSNPDLVLRLKL 190 usage_00061.pdb 174 AQGDADLVAFGRYFVSNPDLVLRLKL 199 usage_00062.pdb 174 AQGDADLVAFGRYFVSNPDLVLRLKL 199 AQGDADLV GR F SN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################