################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:56:14 2021 # Report_file: c_0174_47.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00232.pdb # 2: usage_00281.pdb # 3: usage_00282.pdb # # Length: 204 # Identity: 54/204 ( 26.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 169/204 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/204 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00232.pdb 1 ---GIVEGFYGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRM 57 usage_00281.pdb 1 SARGIVEGFYGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRM 60 usage_00282.pdb 1 ---GVIEGFYGRDWRRDERATVMDWIAAAGMNTYIYGPKDDVHVRARWRVPYDAAGLARL 57 GivEGFYGtpWthqdRldqikfygenklNTYIYaPKDDpyhRekWRePYpesemqRm usage_00232.pdb 58 QELINASAENKVDFVFGISPGIDIRFDGDAGE-E-DFNHLITKAESLYDMGVRSFAIYWD 115 usage_00281.pdb 61 QELINASAENKVDFVFGISPGIDIRFDGDAGE-E-DFNHLITKAESLYDMGVRSFAIYWD 118 usage_00282.pdb 58 TELRDAAAARGMVFYVSLAPCLDVTY----S-DPQDRAALLARVDQLARAGLRNLVLLFD 112 qELinAsAenkvdFvfgisPgiDirf g e DfnhLitkaesLydmGvRsfaiywD usage_00232.pdb 116 DIQDK-----------SAAKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQ- 163 usage_00281.pdb 119 DIQDK-----------SAAKHAQVLNRFNEEFVKAKGDVKPLITCPTEYDTGAMVSNGQ- 166 usage_00282.pdb 113 DIP--SVLPEADRFDSFAEAQADLSNMVLRHL---RG-AGHVVFCPTEYCGRMAG----G 162 DIq sAakhAqvlNrfneef kG vkplitcPTEYdtgamv usage_00232.pdb 164 ---PRAYTRIFAETVDPSIEVMWT 184 usage_00281.pdb 167 ---PRAYTRIFAETVDPSIEVMWT 187 usage_00282.pdb 163 DPRGSAYLQRLGSTLDPAIDIFWT 186 prAYtrifaeTvDPsIevmWT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################