################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:59:50 2021 # Report_file: c_0542_7.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00086.pdb # 4: usage_00087.pdb # 5: usage_00092.pdb # 6: usage_00093.pdb # 7: usage_00094.pdb # 8: usage_00095.pdb # 9: usage_00096.pdb # 10: usage_00097.pdb # 11: usage_00139.pdb # 12: usage_00170.pdb # 13: usage_00206.pdb # 14: usage_00207.pdb # 15: usage_00221.pdb # 16: usage_00222.pdb # 17: usage_00233.pdb # 18: usage_00234.pdb # # Length: 212 # Identity: 33/212 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/212 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 81/212 ( 38.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -------INSLKEEVDQSLKAYFNKD-REYNKVLYDSMAYSIN-----------VGGKRI 41 usage_00034.pdb 1 -------INSLKEEVDQSLKAYFNKD-REYNKVLYDSMAYSIN-----------VGGKRI 41 usage_00086.pdb 1 --MIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 46 usage_00087.pdb 1 -SMIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 47 usage_00092.pdb 1 ---IAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 45 usage_00093.pdb 1 -SMIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 47 usage_00094.pdb 1 --------------VDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 34 usage_00095.pdb 1 --MIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 46 usage_00096.pdb 1 --MIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 46 usage_00097.pdb 1 -SMIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 47 usage_00139.pdb 1 --SLTAYQASSQARVDAA-HTLFTAP-SPELARLYEAR-Y-SV-----------NGGKRV 43 usage_00170.pdb 1 ----TALLERGRTLATPVLRAAVDRL----APPMDTVAAYHFGWIDAQGNPADGDGGKAV 52 usage_00206.pdb 1 ----AAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 44 usage_00207.pdb 1 -SMIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 47 usage_00221.pdb 1 --SLSDFMRSSQERVERALDARLP-AADRMPERLHQAMRYSVL-----------GGGKRM 46 usage_00222.pdb 1 ERSLSDFMRSSQERVERALDARLP-AADRMPERLHQAMRYSVL-----------GGGKRM 48 usage_00233.pdb 1 ----AAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 44 usage_00234.pdb 1 -SMIAAYQARCQARVDAALDALFVAP-REELQRLYEAMRYSVM-----------NGGKRV 47 v a l Y GGKr usage_00033.pdb 42 RPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGE 101 usage_00034.pdb 42 RPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGE 101 usage_00086.pdb 47 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 106 usage_00087.pdb 48 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 107 usage_00092.pdb 46 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 105 usage_00093.pdb 48 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 107 usage_00094.pdb 35 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 94 usage_00095.pdb 47 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 106 usage_00096.pdb 47 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 106 usage_00097.pdb 48 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 107 usage_00139.pdb 44 RPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPA-DDDDLRRGQPTTHKAFDE 102 usage_00170.pdb 53 RPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWKVHGP 110 usage_00206.pdb 45 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 104 usage_00207.pdb 48 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 107 usage_00221.pdb 47 RPLLTYATGQTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDE 106 usage_00222.pdb 49 RPLLTYATGQTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDE 108 usage_00233.pdb 45 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 104 usage_00234.pdb 48 RPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDE 107 RP L A A E iH ySL HDDL D DdlRRg pT h e usage_00033.pdb 102 AIAVLAGDALLNEAMKILVDYS--LE-EGKSALKATKIIADAAGSDGMIGGQIVDIINE- 157 usage_00034.pdb 102 AIAVLAGDALLNEAMKILVDYS--LE-EGKSALKATKIIADAAGSDGMIGGQIVDIINE- 157 usage_00086.pdb 107 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG--- 162 usage_00087.pdb 108 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG 166 usage_00092.pdb 106 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG--- 161 usage_00093.pdb 108 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG 166 usage_00094.pdb 95 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG--- 150 usage_00095.pdb 107 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG 165 usage_00096.pdb 107 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG--- 162 usage_00097.pdb 108 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSV- 165 usage_00139.pdb 103 ACAILAGDGLQSLAFSALLDP-ALSDASAEIRLR-VTTLAQAAGPAG-VGGQAIDLGS-- 157 usage_00170.pdb 111 AQAILVGDALFALANEVLLEL---G---TVEAGRATRRLTKASR--SLIDGQAQDISYEH 162 usage_00206.pdb 105 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGS-- 161 usage_00207.pdb 108 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG 166 usage_00221.pdb 107 ATAILAGDGLQALAFHVLAQD-PSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLAS-- 163 usage_00222.pdb 109 ATAILAGDGLQALAFHVLAQD-PSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLAS-- 165 usage_00233.pdb 105 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG 163 usage_00234.pdb 108 ATAILAADGLQALAFEVLADT-RRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGS-- 164 A A La D L A L a A g g gGQ D usage_00033.pdb -------------------------------- usage_00034.pdb -------------------------------- usage_00086.pdb -------------------------------- usage_00087.pdb 167 V-ALDQAALEVMHRHKTGALIEASVRLGALAS 197 usage_00092.pdb -------------------------------- usage_00093.pdb 167 V-ALDQAALEVMHRHKTG-------------- 183 usage_00094.pdb -------------------------------- usage_00095.pdb 166 V-ALDQAALEVMHRHKTG-------------- 182 usage_00096.pdb -------------------------------- usage_00097.pdb 166 --ALDQAALEVMHRHKTG-------------- 181 usage_00139.pdb -------------------------------- usage_00170.pdb 163 RDRVSVEECLEMEGNK---------------- 178 usage_00206.pdb 162 ---LDQAALEVMHRHKTGALIEASVRLGALAS 190 usage_00207.pdb 167 V-ALDQAALEVMHRHKTGALIEASVRLGALAS 197 usage_00221.pdb -------------------------------- usage_00222.pdb -------------------------------- usage_00233.pdb 164 V-ALDQAALEVMHRHKTG-------------- 180 usage_00234.pdb -------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################