################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:41 2021 # Report_file: c_1261_117.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00786.pdb # 2: usage_00787.pdb # 3: usage_01251.pdb # 4: usage_01525.pdb # 5: usage_01702.pdb # 6: usage_01703.pdb # 7: usage_01704.pdb # 8: usage_01705.pdb # 9: usage_01706.pdb # 10: usage_01707.pdb # 11: usage_01708.pdb # 12: usage_01718.pdb # 13: usage_02394.pdb # 14: usage_02909.pdb # 15: usage_03291.pdb # 16: usage_03877.pdb # 17: usage_03956.pdb # # Length: 52 # Identity: 1/ 52 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 52 ( 3.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 52 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00786.pdb 1 VVYLDFWASWCGPCRQSFPW-NQ-QAK-YKAKGFQVV-AVNLD--------A 40 usage_00787.pdb 1 VVYLDFWASWCGPCRQSFPW-NQ-QAK-YKAKGFQVV-AVNLD--------A 40 usage_01251.pdb 1 GVFLNFWGTWCEPCKKEFPY-ANQYKH-FKSQGVEIV-AVNVG--------- 40 usage_01525.pdb 1 GVFLNFWGTWCEPCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01702.pdb 1 GVFLNFWGTWAEPCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01703.pdb 1 GVFLNFWGTWAEPCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01704.pdb 1 GVFLNFWGTWCEPCKKQFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01705.pdb 1 GVFLNFWGTWCEPCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01706.pdb 1 GVFLNFWGTWCEPCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01707.pdb 1 GVFLNFWGTWAEPAKKEFPYMANQYKH-FKSQGVEIV-A------------- 37 usage_01708.pdb 1 GVFLNFWGTWAEPAKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_01718.pdb 1 --LIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLI-TVASP--------G 40 usage_02394.pdb 1 YVLVDFWFAGCSWCRKETPYLLKTYNA-FKDKGFTIY-GVSTD--------- 41 usage_02909.pdb 1 -VLLNVWATWCPTSRAEHQYLNQLSAQ-GI----RVVGMN------------ 34 usage_03291.pdb 1 GVFLNFWGTWCEHCKKEFPYMANQYKH-FKSQGVEIV-AVNVG--------- 41 usage_03877.pdb 1 YTLLNFWAAYDAESRARNVQLANEVNK-FG----P--------DKIACSIS- 38 usage_03956.pdb 1 YVLVDFWFAGCSWCRKETPYLLKTYNA-FKDKGFTIY-GVS----------- 39 fW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################