################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:56 2021 # Report_file: c_0872_6.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00060.pdb # 9: usage_00061.pdb # 10: usage_00086.pdb # # Length: 152 # Identity: 47/152 ( 30.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/152 ( 30.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/152 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 ------------------------NSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 34 usage_00011.pdb 1 ------------------------NSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 34 usage_00015.pdb 1 -PRVAAYGEVDELNSWVGYTKSLINSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 57 usage_00016.pdb 1 ------------------------NSHT--QVLSNELEEIQQLLFDCGHDLATPAD---H 31 usage_00017.pdb 1 DPRVAAYGEVNELNSWVGYTKSLINSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 58 usage_00024.pdb 1 DQVFEAVGTTDELSSAIGFALELVTE--KGHTFAEELQKIQCTLQDVGSALA-------- 50 usage_00025.pdb 1 DQVFEAVGTTDELSSAIGFALELVTE--KGHTFAEELQKIQCTLQDVGSALATPCSSA-- 56 usage_00060.pdb 1 -PRVAAYGEVDELNSWVGYTKSLINSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 57 usage_00061.pdb 1 -PRVAAYGEVDELNSWVGYTKSLINSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 57 usage_00086.pdb 1 -PRVAAYGEVDELNSWVGYTKSLINSHT--QVLSNELEEIQQLLFDCGHDLATPADDERH 57 EL IQ L D G LA usage_00010.pdb 35 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKHILPGGTQLASALHVARTITRRAERQIVQLM 94 usage_00011.pdb 35 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKAILPGGTQLASALHVARTITRRAERQIVQLM 94 usage_00015.pdb 58 SFKFKQEQPTVWLEEKIDNYTQVVPA--KFILPGGTQLASALHVARTITKRAERQIVQLM 115 usage_00016.pdb 32 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITKRAERQIVQLM 91 usage_00017.pdb 59 -FKFKQEQPTVWLEEKIDNYTQVVP---KFILPGGTQLASALHVARTITRRAERQIVQLM 114 usage_00024.pdb 51 --TF-KAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLV 107 usage_00025.pdb 57 YTTF-KAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLV 115 usage_00060.pdb 58 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLM 117 usage_00061.pdb 58 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLM 117 usage_00086.pdb 58 SFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLM 117 F P LE ID YT P ILP G SALH R RAER V L usage_00010.pdb 95 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 126 usage_00011.pdb 95 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 126 usage_00015.pdb 116 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 147 usage_00016.pdb 92 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 123 usage_00017.pdb 115 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 146 usage_00024.pdb 108 QMGETDANVAKFLNRLSDYLFTLARYAAMKEG 139 usage_00025.pdb 116 QMGETDANVAKFLNRLSDYLFTLARYAAMKEG 147 usage_00060.pdb 118 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 149 usage_00061.pdb 118 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 149 usage_00086.pdb 118 REEQINQDVLIFINRLSDYFFAAARYANYLEQ 149 V F NRLSDY F ARYA E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################