################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:40 2021 # Report_file: c_1459_87.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00036.pdb # 2: usage_00166.pdb # 3: usage_00396.pdb # 4: usage_00397.pdb # 5: usage_00927.pdb # 6: usage_00973.pdb # 7: usage_01182.pdb # 8: usage_01642.pdb # 9: usage_01760.pdb # 10: usage_02340.pdb # 11: usage_02740.pdb # 12: usage_02741.pdb # 13: usage_02770.pdb # # Length: 36 # Identity: 3/ 36 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 36 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 36 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 -NFVFKVVLIGES---------GVGKTNLLSRFTRN 26 usage_00166.pdb 1 ----VKIGVCGPV---------GSGKTALIEALTRH 23 usage_00396.pdb 1 -DYLFKLLLIGDS---------GVGKSCLLLRFADD 26 usage_00397.pdb 1 -DYLFKLLLIGDS---------GVGKSCLLLRF--- 23 usage_00927.pdb 1 -DYLFKVVLIGDS---------GVGKSNLLSRFTRN 26 usage_00973.pdb 1 ------LLALGDS---------GVGKTTFLYRY--- 18 usage_01182.pdb 1 ATLRCKVAVVGEA---------TVGKSALISMFT-- 25 usage_01642.pdb 1 -DYLFKIVLIGDS---------GVGKSNLLSRFTRD 26 usage_01760.pdb 1 --GTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRP 34 usage_02340.pdb 1 -DYLFKIVLIGDS---------GVGKSNLLSRFTTD 26 usage_02740.pdb 1 REHLFKVLVIGEL---------GVGKTSIIKRYVHQ 27 usage_02741.pdb 1 REHLFKVLVIGEL---------GVGKTSIIKRYVHQ 27 usage_02770.pdb 1 -DYLFKVVLIGDS---------GVGKSNLLSRFTRN 26 G g GK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################