################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:51 2021 # Report_file: c_1486_223.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00577.pdb # 2: usage_00937.pdb # 3: usage_01544.pdb # 4: usage_02162.pdb # 5: usage_02206.pdb # # Length: 77 # Identity: 12/ 77 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 77 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 77 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00577.pdb 1 ------DNREIVMKYIHYKLSQRGYEWDAGDDVEENR---------TEAPEGTESEVVHL 45 usage_00937.pdb 1 ------DNREIVMKYIHYKLSQRGYEWD------------------------VVHLTLRQ 30 usage_01544.pdb 1 RSGY--DNREIVMKYIHYKLSQRGYEWDAG----------------DDAEEGTESEVVHL 42 usage_02162.pdb 1 ----SQSNRELVVDFLSYKLSQKGYSWS---------QFSDVEENRTEAPEGTESEAVKQ 47 usage_02206.pdb 1 -------NRELVVDFLSYKLSQKGYSWS---------QFSDVEENRTEAPEGTESEAVKQ 44 NRE V YKLSQ GY W tese v usage_00577.pdb 46 TLRQAGDDFSRRY---- 58 usage_00937.pdb 31 AGDDFSRRYRRDF---- 43 usage_01544.pdb 43 ALRQAGDDFSRRYRRDF 59 usage_02162.pdb 48 ALREAGDEF-------- 56 usage_02206.pdb 45 ALREAGDEFELRY---- 57 alr agd f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################