################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:43 2021 # Report_file: c_0931_48.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00558.pdb # 2: usage_00662.pdb # 3: usage_00663.pdb # 4: usage_00665.pdb # 5: usage_00666.pdb # 6: usage_00808.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 60 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 60 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00558.pdb 1 GETFNLRVVNNY--GDVEVTA----F-GNSFGIPVEDD--------------SQSYFKFG 39 usage_00662.pdb 1 ---STIKLTLEK-NNALFESL----SETAKTSVEIEKGLD------------IE-AFHLG 39 usage_00663.pdb 1 ---STIKLTLEK-NNALFESLDSEHSETAKTSVEIEKGLD-----------IE--AFHLG 43 usage_00665.pdb 1 ---STIKLTLEK-NNALFESL-----ETAKTSVEIEKGLD-----------IEK-AFHLG 39 usage_00666.pdb 1 ---STIKLTLEK-NNALFES-----SETAKTSVEIEKGLD-----------IEK-AFHLG 39 usage_00808.pdb 1 -----DIVGFGENSVWACMNKGD-G--TFGPIM-QLI---DDMTVSKGWTLQK--TVRYA 46 t e f g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################