################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:36 2021 # Report_file: c_1492_61.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00559.pdb # 2: usage_00607.pdb # 3: usage_00958.pdb # 4: usage_01102.pdb # 5: usage_01128.pdb # 6: usage_01129.pdb # 7: usage_01198.pdb # 8: usage_01580.pdb # 9: usage_01598.pdb # 10: usage_01599.pdb # 11: usage_01600.pdb # 12: usage_01637.pdb # 13: usage_02347.pdb # 14: usage_02389.pdb # 15: usage_02390.pdb # 16: usage_02404.pdb # # Length: 53 # Identity: 18/ 53 ( 34.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 53 ( 56.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 53 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00559.pdb 1 QRGLIIFALIWIVAGWFDL----M------ANGAHIAGLAVGLAMAFVDSL-- 41 usage_00607.pdb 1 QRGLIIFALIWIVAGWFDLFGMSMANGA--HIAGLAVGLAMAFVDS------- 44 usage_00958.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSL-- 45 usage_01102.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSL-- 45 usage_01128.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDS--- 44 usage_01129.pdb 1 QRGLIIFALIWIVAGWFDLF--------SMANGAHIAGLAVGLAMAFVDSLN- 44 usage_01198.pdb 1 QRGLIIFALIWIVAGWFDL-GMSM------ANGAHIAGLAVGLAMAFVDSL-- 44 usage_01580.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSL-- 45 usage_01598.pdb 1 -RGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSLN- 45 usage_01599.pdb 1 -RGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVD---- 42 usage_01600.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVD---- 43 usage_01637.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSLNA 47 usage_02347.pdb 1 QRGLIIFALIWIVAGWFD-----A-------NGAHIAGLAVGLAMAFVDSL-- 39 usage_02389.pdb 1 QRGLIIFALIWIVAGWFDLFGMSM------ANGAHIAGLAVGLAMAFVDSL-- 45 usage_02390.pdb 1 QRGLIIFALIWIVAGWFDL-----------ANGAHIAGLAVGLAMAFVDS--- 39 usage_02404.pdb 1 QRGLIIFALIWIVAGW---------------NGAHIAGLAVGLAMAFVDSL-- 36 RGLIIFALIWIVAGW ngahiaGLAvglama #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################