################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:42 2021 # Report_file: c_1457_40.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00179.pdb # 4: usage_01260.pdb # 5: usage_01263.pdb # 6: usage_01264.pdb # 7: usage_01274.pdb # 8: usage_01341.pdb # 9: usage_01553.pdb # 10: usage_01554.pdb # 11: usage_01555.pdb # 12: usage_01556.pdb # 13: usage_01557.pdb # 14: usage_01558.pdb # 15: usage_01559.pdb # 16: usage_01576.pdb # 17: usage_01577.pdb # 18: usage_01578.pdb # 19: usage_01579.pdb # 20: usage_01580.pdb # 21: usage_01581.pdb # 22: usage_01582.pdb # 23: usage_01876.pdb # 24: usage_02375.pdb # 25: usage_02376.pdb # 26: usage_02377.pdb # 27: usage_02379.pdb # 28: usage_02380.pdb # # Length: 31 # Identity: 0/ 31 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 31 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 31 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLGP 29 usage_00042.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_00179.pdb 1 -ITHLDEVMMIRVDEALQISLG--------- 21 usage_01260.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01263.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01264.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01274.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01341.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01553.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01554.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01555.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01556.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01557.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01558.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01559.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01576.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01577.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01578.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01579.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01580.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01581.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01582.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_01876.pdb 1 -YPIN--TEADRAVLAAYRARAKAETASAK- 27 usage_02375.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_02376.pdb 1 -KDVKFGNDARVKMLRGVNVLADAVKVTLG- 29 usage_02377.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLGP 29 usage_02379.pdb 1 --DVKFGNDARVKMLRGVNVLADAVKVTLG- 28 usage_02380.pdb 1 AKDVKFGNDARVKMLRGVNVLADAVKVTLGP 31 a l la #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################