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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:05:24 2021
# Report_file: c_0404_32.html
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#====================================
# Aligned_structures: 4
#   1: usage_00118.pdb
#   2: usage_00184.pdb
#   3: usage_00335.pdb
#   4: usage_00336.pdb
#
# Length:        118
# Identity:        5/118 (  4.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     15/118 ( 12.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           56/118 ( 47.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00118.pdb         1  APTVTP-----------IGDQSSEVYSPISPI---KIATQDNSGNAV-TNTVTG------   39
usage_00184.pdb         1  APVVTY-----------SDI-V-ND-------LIIQG-TAE------AKSQLIITDSEGN   33
usage_00335.pdb         1  VPVISLSPDSDSGTVGDNIT-R-D---KQPTF---IIGNLESDV--V-VVQVDIN-----   44
usage_00336.pdb         1  VPVISLSPDSDSGTVGDNIT-R-D---KQPTF---IIGNLESDV--V-VVQVDIN-----   44
                            Pv                                 i   e         qv i      

usage_00118.pdb        40  LPSGLTFDST----NNTISG--T--PTNIGTSTISIVSTDASGNKTTTTFKYEV-T--   86
usage_00184.pdb        34  T--YTLTVPD----NGKWSAIPY--PS---EGKFTITSVDAIGNRSDDVPLDIK--E-   77
usage_00335.pdb        45  G--TVYNAEKNADGVWFFTP--GTPL-ADGSYTISVIASDAAGNQKNSLPITVTID-S   96
usage_00336.pdb        45  G--TVYNAEKNADGVWFFTP--GTPL-ADGSYTISVIASDAAGNQKNSLPITVTID-S   96
                                                           tis    DA GN     p        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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