################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:45 2021 # Report_file: c_1101_10.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00325.pdb # 2: usage_00326.pdb # 3: usage_00337.pdb # 4: usage_00339.pdb # 5: usage_00633.pdb # 6: usage_00642.pdb # # Length: 135 # Identity: 11/135 ( 8.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/135 ( 23.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/135 ( 34.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00325.pdb 1 SQEALHTQMLTAVQEISHLIEPLASA-----ARAEASQLGHKVSQMAQYFEPLTLAAVGA 55 usage_00326.pdb 1 SQEALHTQMLTAVQEISHLIEPLASA-----ARAEASQLGHKVSQMAQYFEPLTLAAVGA 55 usage_00337.pdb 1 ---------DQATDTILTVTENIFSS-----M-GDAGEMVRQARILAQATSDLVNAIKAD 45 usage_00339.pdb 1 TMEKCTQDLGNSTKAVSSAIAKLLGEIAQGN----ENYAGIAARDVAGGLRSLAQAARGV 56 usage_00633.pdb 1 --------------------EPLASA-----ARAEASQLGHKVSQMAQYFEPLTLAAVGA 35 usage_00642.pdb 1 SQEALHTQMLTAVQEISHLIEPLASA-----ARAEASQLGHKVSQMAQYFEPLTLAAVGA 55 e l s a g Aq L Aa g usage_00325.pdb 56 ASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGN--PKQAAHTQEALEEAVQMMTEA 113 usage_00326.pdb 56 ASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGN--PKQAAHTQEALEEAVQMMTEA 113 usage_00337.pdb 46 AEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHP---DSEEQQQRLREAAEGLRMA 102 usage_00339.pdb 57 AALTSDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPG---DPESQQRLAQVAKAVTQA 113 usage_00633.pdb 36 ASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGN--PKQAAHTQYALYEAVYMMTEA 93 usage_00642.pdb 56 ASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGN--PKQAAHTQEALEEAVQMMTEA 113 A t q lLd k la a l AK A g Q L ea t A usage_00325.pdb 114 VED------------ 116 usage_00326.pdb 114 VEDLTTTLNEA---- 124 usage_00337.pdb 103 TNAAAQN-------- 109 usage_00339.pdb 114 LNRCVSCL------- 121 usage_00633.pdb 94 VEDLTTTLNEAAS-- 106 usage_00642.pdb 114 VEDLTTTLNEAASAA 128 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################