################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:36 2021 # Report_file: c_1071_25.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00096.pdb # 2: usage_00114.pdb # 3: usage_00117.pdb # 4: usage_00170.pdb # 5: usage_00212.pdb # 6: usage_00213.pdb # 7: usage_00229.pdb # 8: usage_00231.pdb # 9: usage_00236.pdb # # Length: 48 # Identity: 4/ 48 ( 8.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 48 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 48 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 -GDVAQKNEVSAMPTLLLFKN-GKEVAKVVG--ANP-AAIKQAIAANA 43 usage_00114.pdb 1 GVELRKKYGVHAYPTLLFINSSGEVVYRLVG--AEDAPELLKKVKLGV 46 usage_00117.pdb 1 -PETARNFQVVSIPTLILFKD-GQPVKRIVG--AKGKAALLREL---- 40 usage_00170.pdb 1 -PETARNFQVVSIPTLILFKD-GQPVKRIVG--AKGKAALLREL---- 40 usage_00212.pdb 1 -GDVAQKNEVSAMPTLLLFKN-GKEVAKVVG--ANP-AAIKQAIAAN- 42 usage_00213.pdb 1 -GDVAQKNEVSAMPTLLLFKN-GKEVAKVVG--ANP-AAIKQAIAAN- 42 usage_00229.pdb 1 --ETPNAYQVRSIPTLMLVRD-GKVIDKKVG--ALPKSQLKAWVESAQ 43 usage_00231.pdb 1 -KEVAEKYNVEAMPTFLFIKD-GAEADKVVG--ARK-DDLQNTIVKH- 42 usage_00236.pdb 1 LEDVVVENEVMGIPSLLVFKN-GDKIAHLHSANAKSPEQVESFLAET- 46 V Ptl G vg A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################