################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:54:28 2021 # Report_file: c_1191_52.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00071.pdb # 2: usage_00261.pdb # 3: usage_00309.pdb # 4: usage_00519.pdb # 5: usage_00693.pdb # 6: usage_00811.pdb # 7: usage_00881.pdb # 8: usage_00915.pdb # 9: usage_01573.pdb # 10: usage_01574.pdb # 11: usage_01817.pdb # 12: usage_01881.pdb # 13: usage_02061.pdb # 14: usage_02072.pdb # 15: usage_02120.pdb # 16: usage_02210.pdb # 17: usage_02281.pdb # # Length: 40 # Identity: 1/ 40 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 40 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 40 ( 60.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 ---L------GSGQFAVVKKCREKSTGLQYAAKFIK---- 27 usage_00261.pdb 1 ---I------GEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00309.pdb 1 ---I------GEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_00519.pdb 1 ---I------GEGTYGVVYKARNKLTGEVVALKKIRLDT- 30 usage_00693.pdb 1 ----------GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_00811.pdb 1 ---L------GKGKFGNVYLAREKQSKFILALKVLF---- 27 usage_00881.pdb 1 ---M------GEGKESAVFNCYSEKFG---ECVVKFHK-V 27 usage_00915.pdb 1 ---I------GKGAFGEVRLVQKKDTGKIYAMKTLLKS-- 29 usage_01573.pdb 1 ----------GEGTYGVVYKARNKLTGEVVALKKI----- 25 usage_01574.pdb 1 ----------GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_01817.pdb 1 ---I------GEGTYGVVYKARNKLTGEVVALKKIR---- 27 usage_01881.pdb 1 LKLL------GKGTFGKVILVKEKATGRYYAMKILK---- 30 usage_02061.pdb 1 ----------GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_02072.pdb 1 ----------GEGTYGVVYKARNKLTGEVVALKKIR---- 26 usage_02120.pdb 1 ----RFEKIG-----GTVYTAMDVATGQEVAIKQMN---- 27 usage_02210.pdb 1 ----------GTGQFGVVKYGKWR-GQYDVAIKMIR---- 25 usage_02281.pdb 1 ---L------GAGNGGVVTKVQHRPSGLIMARKLIH---- 27 V a k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################