################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:32 2021 # Report_file: c_0151_2.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00013.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00047.pdb # 5: usage_00049.pdb # 6: usage_00063.pdb # 7: usage_00064.pdb # 8: usage_00065.pdb # 9: usage_00066.pdb # 10: usage_00067.pdb # 11: usage_00068.pdb # 12: usage_00069.pdb # 13: usage_00070.pdb # 14: usage_00086.pdb # 15: usage_00090.pdb # 16: usage_00110.pdb # 17: usage_00126.pdb # 18: usage_00127.pdb # 19: usage_00128.pdb # 20: usage_00129.pdb # 21: usage_00130.pdb # 22: usage_00131.pdb # 23: usage_00162.pdb # 24: usage_00163.pdb # # Length: 133 # Identity: 18/133 ( 13.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/133 ( 24.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/133 ( 30.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 VQ-LLESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGMIDPNSGGTKY 59 usage_00044.pdb 1 VQ-LVESGGGLVQPGGSLRLSCAASGFTISGYGIHWVRQAPGKGLEWVAYIYPDSGYTDY 59 usage_00045.pdb 1 -Q-LQQSGPELVRPGASVKISCKASGYTFTDYYIHWVKQRPGEGLEWIGWIYPGSGNTKY 58 usage_00047.pdb 1 VQ-LQQSGTELVKSGASVKLSCTASGFNIKDTHMNWVKQRPEQGLEWIGRIDPANGNIQY 59 usage_00049.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTITGSAIHWVRQAPGKGLEWVAIINPNGGYTYY 58 usage_00063.pdb 1 VQ-LVESGGGLVQPGGSLRLSCAASGFNISVYMMHWVRQAPGKGLEWVASIYPYSGYTYY 59 usage_00064.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY 58 usage_00065.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00066.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00067.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00068.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00069.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00070.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY 58 usage_00086.pdb 1 -VQLQESGAEVKKPGSSVRVSCKASGGTFDSYSIHWVRQAPGQGLEWMGGIIPAFGTLSS 59 usage_00090.pdb 1 -Q-LVESGAEVKKPGSSVKVSCKTSGGTFNRLAMSWVRQAPGQGLEWMGGIMPIFDITNY 58 usage_00110.pdb 1 -Q-LQESGGGLVQPGGSLRLSCAASGFTFSDHYMYWVRQAPGKGLEWVATISDGGSYTYY 58 usage_00126.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00127.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00128.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00129.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00130.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00131.pdb 1 -Q-LVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYY 58 usage_00162.pdb 1 VK-VEESGGGLVQPGGSMKISCVVSG---SNYWMSWVRQSPEKGLEWVAEIR-----TYY 51 usage_00163.pdb 1 -Q-LVQSGGGVKKPGTSVTISCLASEYTFNEFVIHWIRQAPGQGPVWLGLIKRSG-RLMT 57 l SG pG S SC Sg Wv Q P leW I usage_00013.pdb 60 NEKFKSKATLTVDKPSNTAYMQLSSLTSEDSAVYYCTRR--------------------D 99 usage_00044.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAREDF------R--NRRRL--WYV 109 usage_00045.pdb 59 NEKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARGGK-----------------FA 101 usage_00047.pdb 60 DPKFRGKATITADTSSNTAYLQLSSLTSEDTAVYYCATKVIY-----Y-------QGRGA 107 usage_00049.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAR-----------------FS 101 usage_00063.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYVY-----------------HA 102 usage_00064.pdb 59 ADSVKGRFTISADTSKNTLYLQMNSLRAEDTAVYYCSRWGG------D--G------FYA 104 usage_00065.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00066.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00067.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00068.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00069.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00070.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00086.pdb 60 AQDFQARVTISADKSTSTAYMELSGLRSEDTAVYYCARGSH------LYP-------NDA 106 usage_00090.pdb 59 AQKFQGRVTIITDESTSTAYMELRSLTSEDSAVYYCARASY------S--S----SSPYA 106 usage_00110.pdb 59 SDSVEGRFTTSRDNSKNTLYLQMNSLRAEDTAIYYCSRYRY------D--D------AMD 104 usage_00126.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00127.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00128.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00129.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00130.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00131.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF------F--L------PYA 104 usage_00162.pdb 52 AESVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLP--------------------- 90 usage_00163.pdb 58 SYKFQDRLSLRRDRSTGTVFMELRGLRLDDTAVYYCARDGLGEVAPAY---------LYG 108 t D s t y L eD a YyC usage_00013.pdb 100 MDYWGAGTTVTVS 112 usage_00044.pdb 110 MDYWGQGTLVTVS 122 usage_00045.pdb 102 MDYWGQGTSVTVS 114 usage_00047.pdb 108 MDYWGQGTTLTVS 120 usage_00049.pdb 102 FDYWGQGTLVTVS 114 usage_00063.pdb 103 LDYWGQGTLVTVS 115 usage_00064.pdb 105 MDVWGQGTLVTVS 117 usage_00065.pdb 105 MDYWGQGTLVTVS 117 usage_00066.pdb 105 MDYWGQGTLVTVS 117 usage_00067.pdb 105 MDYWGQGTLVTVS 117 usage_00068.pdb 105 MDYWGQGTLVTVS 117 usage_00069.pdb 105 MDYWGQGTLVTVS 117 usage_00070.pdb 105 MDYWGQGTLVTVS 117 usage_00086.pdb 107 LAIWGQ------- 112 usage_00090.pdb 107 FDIWGQGTMVTVS 119 usage_00110.pdb 105 YW--GQGTLVTV- 114 usage_00126.pdb 105 MDYWGQGTLVTVS 117 usage_00127.pdb 105 MDYWGQGTLVTV- 116 usage_00128.pdb 105 MDYWGQGTLVTV- 116 usage_00129.pdb 105 MDYWGQGTLVTVS 117 usage_00130.pdb 105 MDYWGQGTLVTV- 116 usage_00131.pdb 105 MDYWGQGTLVTV- 116 usage_00162.pdb 91 MDYWGQGTSVTVS 103 usage_00163.pdb 109 IDAWGQGSTVIVT 121 Gq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################