################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:01 2021 # Report_file: c_1373_109.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00035.pdb # 2: usage_00198.pdb # 3: usage_00199.pdb # 4: usage_00200.pdb # 5: usage_01139.pdb # 6: usage_01140.pdb # 7: usage_01141.pdb # 8: usage_01142.pdb # 9: usage_01143.pdb # 10: usage_01146.pdb # 11: usage_01147.pdb # 12: usage_01148.pdb # 13: usage_01772.pdb # # Length: 53 # Identity: 3/ 53 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 53 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 53 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 ---ELVKAFKALLKEEKFSSQG----EIVAALQEQGFDNINQSKVSRMLTKFG 46 usage_00198.pdb 1 NRAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEEL- 47 usage_00199.pdb 1 NRAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEEL- 47 usage_00200.pdb 1 NRAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEEL- 47 usage_01139.pdb 1 NRAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 48 usage_01140.pdb 1 NRAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 48 usage_01141.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01142.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01143.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01146.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01147.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01148.pdb 1 -RAGRQARIVAILSSAQVRSQN----ELAALLAAEGIE-VTQATLSRDLEELG 47 usage_01772.pdb 1 -RKQDLDRLKRVIALKKPSASDADWTEVLRLLAKEGVV-EPEVVRQIAITRLK 51 r a l sq E alLa eG q sr l l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################