################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:28 2021 # Report_file: c_0970_54.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00123.pdb # 2: usage_00152.pdb # 3: usage_00445.pdb # 4: usage_00510.pdb # 5: usage_01072.pdb # # Length: 76 # Identity: 4/ 76 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 76 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 76 ( 30.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 --GDFLALDLGGTNFRVLLVKIRS---GKKRTVE-MHNKIYAI---PIEIM--QGTGEEL 49 usage_00152.pdb 1 --GDFLSLDLGGTNFRVMLVKVGE-----QWSVK-TKHQMYSI---PEDAM--TGTAEML 47 usage_00445.pdb 1 -----LALDLGGTNFRVMLVKVGEDLEG-QWKVE-TKHKMYSI---PVDAM--TGTAEML 48 usage_00510.pdb 1 PIMRVASIDIGSNSVRLTIAQIKD------GKLSIILERGRITSLGTKVKETGRL-QEDR 53 usage_01072.pdb 1 --GDFLALDLGGTNFRVLLVKIRS---GKKRTVE-MHNKIYAI---PIEIM--QGTGEEL 49 l lDlGgtnfRv lvk v y i p m g E l usage_00123.pdb 50 FDHIVSCISDFLDYMG 65 usage_00152.pdb 48 FDYISECISDFLDKH- 62 usage_00445.pdb 49 FDYIAECISDYLDQQ- 63 usage_00510.pdb 54 IEETIQVLKEY----- 64 usage_01072.pdb 50 FDHIVSCISDFLDYMG 65 fd i cisd #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################