################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:16 2021 # Report_file: c_1481_205.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01898.pdb # 2: usage_02078.pdb # 3: usage_02391.pdb # 4: usage_02607.pdb # 5: usage_02608.pdb # # Length: 65 # Identity: 1/ 65 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 65 ( 9.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 65 ( 47.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01898.pdb 1 --MGFVINAIYAMAHGLQNMHHAL-------------CPGHVGL--CDAMKPIDGSKLLD 43 usage_02078.pdb 1 -KVQFVIDAVYAMAHALHHMNKDL-------------CA----V--CPEMEQAGGKKLLK 40 usage_02391.pdb 1 YTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCL---ANPAVP----WG-QGVEIER 52 usage_02607.pdb 1 -SNLYLYDSVLMLANAFHRKLEDRKWHSMAS--LNCI---RKSTKP----WN-GGRSMLD 49 usage_02608.pdb 1 -SNLYLYDSVLMLANAFHRKLEDRKWHSMAS--LNCI---RKSTKP----WN-GGRSMLD 49 d v a a G l usage_01898.pdb 44 FLIK- 47 usage_02078.pdb 41 YIRNV 45 usage_02391.pdb 53 ALKQ- 56 usage_02607.pdb 50 TIKK- 53 usage_02608.pdb 50 TI--- 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################