################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:39 2021 # Report_file: c_1407_29.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00523.pdb # 2: usage_00937.pdb # 3: usage_00938.pdb # 4: usage_00941.pdb # 5: usage_00942.pdb # # Length: 67 # Identity: 60/ 67 ( 89.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 67 ( 91.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 67 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00523.pdb 1 NHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANV-LATASQNVGVTWGSRVHGRL 59 usage_00937.pdb 1 NHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANVMLATASQNVGVTWGSRVHGRL 60 usage_00938.pdb 1 -HEEYREFKAWEEALLNAD--VASSPFADWGWWYRIANVMLATASQNVGVTWGSRVHGRL 57 usage_00941.pdb 1 NHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANVMLATASQNVGVTWGSRVHGRL 60 usage_00942.pdb 1 NHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANVMLATASQNVGVTWGSRVHGRL 60 HEEYREFKAWEEALLNAD VASSPFADWGWWYRIANV LATASQNVGVTWGSRVHGRL usage_00523.pdb 60 A-IFQDK 65 usage_00937.pdb 61 MAIFQD- 66 usage_00938.pdb 58 MAIFQDK 64 usage_00941.pdb 61 MAIFQD- 66 usage_00942.pdb 61 MAIFQD- 66 m IFQD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################