################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:47 2021 # Report_file: c_0031_22.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00147.pdb # 4: usage_00156.pdb # 5: usage_00183.pdb # # Length: 242 # Identity: 28/242 ( 11.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/242 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/242 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAI 60 usage_00041.pdb 1 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAI 60 usage_00147.pdb 1 DLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLVMTHDDDANKQSEMIDTAIGRGAKAI 60 usage_00156.pdb 1 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVP-DGEKTLNAIDSLAASGAKGF 59 usage_00183.pdb 1 DLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLVMTHDDDANKQSEMIDTAIGRGAKAI 60 ai nP F a A a LGyE D K s D i G ai usage_00040.pdb 61 IFNPTDADGSIANVKRAKEAGIPVFCVDRGINA------RGLAVAQIYSDNYYGGVLMGE 114 usage_00041.pdb 61 IFNPTDADGSIANVKRAKEAGIPVFCVDRGINA------RGLAVAQIYSDNYYGGVLAGE 114 usage_00147.pdb 61 ILDNAGADASVAAVKKAKDAGIPSFLIDREINA------TGVAVAQIVSNNYQGAQLGAQ 114 usage_00156.pdb 60 VICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMD--TVPLVMMAATKIGERQGQ 117 usage_00183.pdb 61 ILDNAGADASVAAVKKAKDAGIPSFLIDREINA------TGVAVAQIVSNNYQGAQLGAQ 114 i ad s A Vk Ak agip f Dr ina aVaqi s ny g l usage_00040.pdb 115 YFVKFLK-EKYPDAKEI----PYAEL-LGILSAQPTWDRSNGFHSVVDQY---PE-FKMV 164 usage_00041.pdb 115 YFVKFLK-EKYPDAKEI----PYAEL-LGILSAQPTWDRSNGFHSVVDQY---PE-FKMV 164 usage_00147.pdb 115 EFVKLMGE-------KG----NYVEL-VGKESDTNAGIRSQGYHDVIDDY---PE-MKSV 158 usage_00156.pdb 118 ELYKEMQ-KRG------WDVKESAVMAITANELDTARRRTTGSMDALKAAGFPE-KQ--I 167 usage_00183.pdb 115 EFVKLMGE-------KG----NYVEL-VGKESDTNAGIRSQGYHDVIDDY---PE-MKSV 158 fvK y el g s Rs G h v d y p v usage_00040.pdb 165 AQQSAE-FDRDTAYKVTEQILQAHP-E-IKAIWCGNDAMALGAMKACEAAGRT--DIYIF 219 usage_00041.pdb 165 AQQSAE-FDRDTAYKVTEQILQAHP-E-IKAIWCGNDAMALGAMKACEAAGRT--DIYIF 219 usage_00147.pdb 159 AKQSAN-WSQTEAYSKMETILQANP-D-IKGVISGNDTMAMGAIAALQAAGRK--DVIVV 213 usage_00156.pdb 168 YQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGI 227 usage_00183.pdb 159 AKQSAN-WSQTEAYSKMETILQANP-D-IKGVISGNDTMAMGAIAALQAAGRK--DVIVV 213 a qsa Ay e iLqa P ik gND ma Ga A aaGr D usage_00040.pdb 220 GF 221 usage_00041.pdb 220 GF 221 usage_00147.pdb 214 GF 215 usage_00156.pdb 228 GI 229 usage_00183.pdb 214 GF 215 Gf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################