################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:39 2021 # Report_file: c_1373_77.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00342.pdb # 2: usage_00596.pdb # 3: usage_00599.pdb # 4: usage_00600.pdb # 5: usage_00654.pdb # 6: usage_00656.pdb # 7: usage_00892.pdb # 8: usage_00894.pdb # 9: usage_00988.pdb # 10: usage_01061.pdb # 11: usage_01062.pdb # 12: usage_01716.pdb # # Length: 51 # Identity: 5/ 51 ( 9.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 51 ( 21.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 51 ( 29.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 RNTEDEILKAAVMKYGK-N----QWSRIASLLHRKSAKQCKARWYEW---- 42 usage_00596.pdb 1 TKEEDQRVIKLVQKYGP-K----RWSVIAKHLKGRIGKQCRERWH------ 40 usage_00599.pdb 1 -KEEDQRVIKLVQKYGP-K----RWSVIAKHLKGRIGKQCRERWHNHLNP- 44 usage_00600.pdb 1 TKEEDQRLIKLVQKYGP-K----RWSVIAKHLKGRIGKQCRERWHNHL--- 43 usage_00654.pdb 1 TKEEDQRVIKLVQKYGP-K----RWSVIAKHLKGRIGKQCRERWHNH---- 42 usage_00656.pdb 1 TKEEDQRVIEHVQKYGP-K----RWSDIAKHLKGRIGKQCRERWHNH---- 42 usage_00892.pdb 1 -EEEDLKLQQLVMRYGA-K----DWIRISQLMITRNPRQCRE--------- 36 usage_00894.pdb 1 -EEEDLKLQQLVMRYGA-K----DWIRISQLMITRNPRQCRERWNNYINP- 44 usage_00988.pdb 1 TVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIKL 51 usage_01061.pdb 1 TKEEDQRVIELVQKYGP-K----RWSVIAKHLKGRIGKQCRERW------- 39 usage_01062.pdb 1 TKEEDQRVIELVQKYGP-K----RWSVIAKHLKGRIGKQCRERWHNHLN-- 44 usage_01716.pdb 1 TKEEDQRVIKLVQKYGP-K----RWSVIAKHLKGRIGKQCRERWHNHLN-- 44 eEd v Yg W I r Qc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################