################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:08 2021 # Report_file: c_1484_5.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00839.pdb # 2: usage_00840.pdb # 3: usage_00841.pdb # 4: usage_00842.pdb # 5: usage_01377.pdb # 6: usage_03390.pdb # 7: usage_04302.pdb # 8: usage_04303.pdb # # Length: 90 # Identity: 39/ 90 ( 43.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 86/ 90 ( 95.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 90 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00839.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_00840.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_00841.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_00842.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_01377.pdb 1 SPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFA 60 usage_03390.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_04302.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 usage_04303.pdb 1 TPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFA 60 tPEElRssaQkYtaGSqQvtevLnlLTqeQavIdeNWdGstFdsFEaQFneLSPKiteFA usage_00839.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQI-- 88 usage_00840.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQI-- 88 usage_00841.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQIS- 89 usage_00842.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQISG 90 usage_01377.pdb 61 QLLEEIKQQLNSTADAVQEQDQQLSNNF-- 88 usage_03390.pdb 61 QLLEDINQQLLKVADIIEQTDADIAS---- 86 usage_04302.pdb 61 QLLEDINQQLLKVADIIEQTDADIAS---- 86 usage_04303.pdb 61 QLLEDINQQLLKVADIIEQTDADIASQISG 90 QLLEdInQQLlkvADiieqtDadias #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################