################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:14 2021 # Report_file: c_1345_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00219.pdb # 2: usage_00235.pdb # 3: usage_00236.pdb # 4: usage_00237.pdb # 5: usage_00238.pdb # 6: usage_00239.pdb # 7: usage_00240.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 56 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 56 ( 51.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00219.pdb 1 PTDEARAFA-----EKNGLSFIETSALD---------S--TNVEAAFQTILTEIYR 40 usage_00235.pdb 1 GEAHYAEHFA--LGG-SKPIIASVAEA-SGPLFPPGIV--PDIFS----------- 39 usage_00236.pdb 1 GEAHYAEHFA--LGG-SKPIIASVAEA-SGPLFPPI-V--PDIFS----------- 38 usage_00237.pdb 1 GEAHYAEHFA--LGG-SKPIIASVAEA-SGPLFPPGIV--PDIFS----------- 39 usage_00238.pdb 1 GEAHYAEHFARHLGG-SKPIIASVAEA-SGPLFPPDIV--PDIFS----------- 41 usage_00239.pdb 1 GEAHYAEHFA--LGG-SKPIIASVAEA-SGPLFPPGSSIVPDIFS----------- 41 usage_00240.pdb 1 GEAHYAEHFA--LGG-SKPIIASVAEA-SGPLFPPGSSIVPDIFS----------- 41 geahyaehf g skpiiasvaea pdifs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################