################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:52 2021 # Report_file: c_0087_6.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00007.pdb # 4: usage_00049.pdb # 5: usage_00103.pdb # # Length: 121 # Identity: 26/121 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/121 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/121 ( 15.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASKTIS----KYLAWYQQKPGKAPKLLIYS-G-STL 54 usage_00005.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASKTIS----KYLAWYQQKPGKAPKLLIYS-G-STL 54 usage_00007.pdb 1 --QVRQSPQSLTVWEGETAILNCSYENSAF----DYFPWYQQFPGEGPALLISILSVSNK 54 usage_00049.pdb 1 -IVLTQSPASLTVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYA-A-SNL 57 usage_00103.pdb 1 DIVMTQSQKFMSTSVGDRVSITCKASQNVG----TAVAWYQQKPGQSPKLLIYS-A-SNR 54 tQSp sl s G r i C as y WYQQkPG PkLLIy S usage_00004.pdb 55 QSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQHN---E-YPLTFGQGTKVEIKR 108 usage_00005.pdb 55 QSGVPSRFSGSGSG--TDFTLTISSLQPEDFATYYCQQHN---E-YPLTFGQGTKVEIKR 108 usage_00007.pdb 55 KED--GRFTIFFNKREKKLSLHIADSQPGDSATYFCAASASFGDNSKLIWGLGTSLVVNP 112 usage_00049.pdb 58 ESGIPARFSGSGSG--TDFTLNIHPVEEEDAATYYCQQSN---E-DPLTFGAGTKLEI-- 109 usage_00103.pdb 55 YTGVPDRFTGSGSG--TDFTLTISNMQSEDLADYFCQQFS---S-YPYTFGGGTKLEI-- 106 g RF gsgsg tdftL I q eD AtY Cqq pltfG GTk ei usage_00004.pdb 109 T 109 usage_00005.pdb 109 T 109 usage_00007.pdb - usage_00049.pdb - usage_00103.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################