################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:36 2021 # Report_file: c_0001_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00026.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00087.pdb # 5: usage_00088.pdb # # Length: 203 # Identity: 78/203 ( 38.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 171/203 ( 84.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/203 ( 15.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 AVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTF 60 usage_00085.pdb 1 -----------TAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVG---G-FTR 45 usage_00086.pdb 1 -----------TAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVG---G-FTR 45 usage_00087.pdb 1 -----------TAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVG---G-FTR 45 usage_00088.pdb 1 -----------TAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVG---G-FTR 45 taiIdpSaviasdvqigPyciigpqvtiGagtkLhshvVVG g fTr usage_00026.pdb 61 IGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSK--PSDKTVIGD 118 usage_00085.pdb 46 IGQNNEIFQFASVGEVCQDLKYKG-EETWLEIGNNNLIREHCSLHRGTVQDN-ALTKIGS 103 usage_00086.pdb 46 IGQNNEIFQFASVGEVCQDLKYKG-EETWLEIGNNNLIREHCSLHRGTVQDN-ALTKIGS 103 usage_00087.pdb 46 IGQNNEIFQFASVGEVCQDLKYKG-EETWLEIGNNNLIREHCSLHRGTVQDN-ALTKIGS 103 usage_00088.pdb 46 IGQNNEIFQFASVGEVCQDLKYKG-EETWLEIGNNNLIREHCSLHRGTVQDN-ALTKIGS 103 IGqNNeIfqfAsVGevCQDLKYKg eEtwLeIGNNNlIREhCSlHRgtv n alTkIGs usage_00026.pdb 119 NNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCHIGSFAFIGG 178 usage_00085.pdb 104 HNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGG 163 usage_00086.pdb 104 HNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGG 163 usage_00087.pdb 104 HNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGG 163 usage_00088.pdb 104 HNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGG 163 hNLlMvntHIAHDCivGDhNIFANNvgvAGHVhigDhvivgGnSgiHQFCkIdSysmIGG usage_00026.pdb 179 GSVVSQDVPK------------- 188 usage_00085.pdb 164 ASLILKDVPAYVMASGNPAHAFG 186 usage_00086.pdb 164 ASLILKDVPAYVMASGNPAHA-- 184 usage_00087.pdb 164 ASLILKDVPAYVMASGNPAHAFG 186 usage_00088.pdb 164 ASLILKDVPAYVMASGNPAHAFG 186 aSlilkDVPa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################