################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:39:06 2021 # Report_file: c_1324_76.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00215.pdb # 4: usage_00216.pdb # 5: usage_00224.pdb # 6: usage_00319.pdb # 7: usage_00367.pdb # 8: usage_00369.pdb # 9: usage_00370.pdb # 10: usage_00449.pdb # 11: usage_00450.pdb # 12: usage_00451.pdb # 13: usage_00453.pdb # 14: usage_00454.pdb # 15: usage_00456.pdb # 16: usage_00457.pdb # 17: usage_00650.pdb # 18: usage_00651.pdb # 19: usage_00673.pdb # 20: usage_00674.pdb # 21: usage_00675.pdb # 22: usage_00676.pdb # 23: usage_00677.pdb # 24: usage_00678.pdb # 25: usage_00679.pdb # 26: usage_00724.pdb # 27: usage_00726.pdb # # Length: 53 # Identity: 23/ 53 ( 43.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 53 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 53 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 53 usage_00029.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 53 usage_00215.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 53 usage_00216.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 53 usage_00224.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00319.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEAALHATRAAVEEG 52 usage_00367.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00369.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 53 usage_00370.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00449.pdb 1 --YDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 51 usage_00450.pdb 1 ---DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 50 usage_00451.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00453.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00454.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00456.pdb 1 --YDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEE- 50 usage_00457.pdb 1 -DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG 52 usage_00650.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00651.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00673.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00674.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00675.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00676.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00677.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00678.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00679.pdb 1 SDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVE-- 51 usage_00724.pdb 1 ---KEKLNERLAKLS-DGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEG 49 usage_00726.pdb 1 ---KEKLNERLAKLS-DGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEG 49 GVAV KVG VE EKK RV dAL ATRAAVE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################