################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:40 2021 # Report_file: c_1082_32.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00129.pdb # 2: usage_00161.pdb # 3: usage_00279.pdb # 4: usage_00280.pdb # 5: usage_00619.pdb # 6: usage_00620.pdb # # Length: 71 # Identity: 21/ 71 ( 29.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 71 ( 78.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 71 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 PHGLIMDRTERLARDVMKEMGGHHIVALCVLKGG-YKFFADLLDYIKALNRNSDRS---I 56 usage_00161.pdb 1 -GGLVKDRVEKLAYDIHRTYFGEELHIICILKGSR-GFFNLLIDYLATIQKYSGRESSVP 58 usage_00279.pdb 1 -HGLIMDRTERLARDVMKEMGGHHIVALCVLKGG-YKFFADLLDYIKALNRNSDRS---I 55 usage_00280.pdb 1 --GLIMDRTERLARDVMKEMGGHHIVALCVLKGG-YKFFADLLDYIKALNRNSDRS---I 54 usage_00619.pdb 1 PHGLIMDRTERLARDVMKEMGGHHIVALCVLKGG-YKFFADLLDYIKALNRNSDRS---I 56 usage_00620.pdb 1 -HGLIMDRTERLARDVMKEMGGHHIVALCVLKGG-YKFFADLLDYIKALNRNSDRS---I 55 GLimDRtErLArDvmkemgGhhivalCvLKGg kFFadLlDYikalnrnSdRs i usage_00129.pdb 57 PMTVDFIRLK- 66 usage_00161.pdb 59 PFFEHYVRLK- 68 usage_00279.pdb 56 PMTVDFIRLK- 65 usage_00280.pdb 55 PMT-------- 57 usage_00619.pdb 57 PMTVDFIRLKS 67 usage_00620.pdb 56 PMTVDFIRLKS 66 Pmt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################