################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:59 2021 # Report_file: c_1430_59.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00132.pdb # 2: usage_00133.pdb # 3: usage_00286.pdb # 4: usage_00649.pdb # 5: usage_00652.pdb # 6: usage_00680.pdb # 7: usage_00703.pdb # 8: usage_00735.pdb # 9: usage_00888.pdb # 10: usage_00889.pdb # 11: usage_00890.pdb # 12: usage_00905.pdb # 13: usage_01008.pdb # 14: usage_01009.pdb # 15: usage_01010.pdb # 16: usage_01011.pdb # 17: usage_01059.pdb # 18: usage_01060.pdb # 19: usage_01061.pdb # 20: usage_01138.pdb # # Length: 142 # Identity: 28/142 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/142 ( 32.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/142 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00132.pdb 1 FRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHTAR-----KDEKTQ------------- 42 usage_00133.pdb 1 FRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHTAR-----KDE---------------- 39 usage_00286.pdb 1 -KERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSAC-----KTERSAT------------ 42 usage_00649.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSK-ADPS 54 usage_00652.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSK-ADPS 54 usage_00680.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHTAC-----KEEKLAISREANSK-ADPS 54 usage_00703.pdb 1 -RASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTAR-----KDEKTAQTRESHAK-AD-- 51 usage_00735.pdb 1 -KETKEAEDGFRKAQKPWAKKLKEVEAAKKAYHAAC-----KEEKLAISRETNSK-ADPA 53 usage_00888.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSKA-P-S 53 usage_00889.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSK-DP-- 52 usage_00890.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSK-AD-- 52 usage_00905.pdb 1 FRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHTARKDEKTAQTRESH--------AQ-- 50 usage_01008.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEEKLAMTREMNSK-TEQS 54 usage_01009.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEEKLAMTREMNSK-TEQS 54 usage_01010.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEEKLAMTREMNSK-TEQS 54 usage_01011.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAAC-----KEEKLAISREANSK-ADPS 54 usage_01059.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEERLAMTREMNSK-TEQS 54 usage_01060.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEERLAMTREMNSK-TEQS 54 usage_01061.pdb 1 FKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLAC-----KEERLAM--------T--- 44 usage_01138.pdb 1 FKETKEAEDGFRKAQKPWAKK-KELEAAKKAYHLAC-----KEEKLAT--------R--- 43 e aEDgFrKAQKPW K ke Ea Kk H A k e usage_00132.pdb 43 ----------------------TTKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQ 80 usage_00133.pdb 40 ------------------------KEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQ 75 usage_00286.pdb 43 ---------------HDRVQKT-KDQVQKCREKYEQAIAEITKYNSVYIED-TSVFEKCQ 85 usage_00649.pdb 55 ---L---NPEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQY-EN-EQVFEQCQ 105 usage_00652.pdb 55 ---L---NPEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQY-EN-EQVFEQCQ 105 usage_00680.pdb 55 ---L---NPEQLKKLQDKIEKC-KQDVLKTKDKYEKSLKELDQTTPQYMENMEQVFEQCQ 107 usage_00703.pdb 52 ---S-S---MQLRKLQERVGRC-TKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQ 103 usage_00735.pdb 54 ---L---NPEQLKKLQDKVERS-KQDVLKTKAKYEKSLKELDNATPQYMENMEQVFEQCQ 106 usage_00888.pdb 54 ---L---NPEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQ 106 usage_00889.pdb 53 ---S---LNEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQ 105 usage_00890.pdb 53 ---P---SNEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQ 105 usage_00905.pdb 51 E--QLR-------KLQERVGRC-TKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQ 100 usage_01008.pdb 55 ---V---TPEQQKKLQDKVDKC-KQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 107 usage_01009.pdb 55 ---V---TPEQQKKLQDKVDKC-KQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 107 usage_01010.pdb 55 ---V---TPEQQKKLQDKVDKC-KQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 107 usage_01011.pdb 55 ---L---NPEQLKKLQDKIEKC-KQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQ 107 usage_01059.pdb 55 ---V---TPEQQKKLVDKVDKC-RQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQ 107 usage_01060.pdb 55 ---V---TPEQQKKLVDKVDKC-RQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQ 107 usage_01061.pdb 45 --------------LVDKVDKC-RQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQ 89 usage_01138.pdb 44 -ENS--T--EQQKKLQDKVDKC-KQDVQKTQEKYEKVLEDVGKTTPQY-EN-EQVFEQCQ 95 K YE l tp Y E eq FE CQ usage_00132.pdb 81 AAERQRLLFFKDVLLTLHQHL- 101 usage_00133.pdb 76 AAERQRLLFFKDVLLTLHQHL- 96 usage_00286.pdb 86 TFEKTRLQFFKEILFNVHSCL- 106 usage_00649.pdb 106 QFEEKRLRFFREVLLEVQKHLD 127 usage_00652.pdb 106 QFEEKRLRFFREVLLEVQKHLD 127 usage_00680.pdb 108 QFEEKRLRFFREVLLEVQKHL- 128 usage_00703.pdb 104 AAERQRLLFFKDVLLTLHQHL- 124 usage_00735.pdb 107 QFEEKRLRFFREVLLEVQKHL- 127 usage_00888.pdb 107 QFEEKRLRFFREVLLEVQKH-- 126 usage_00889.pdb 106 QFEEKRLRFFREVLLEVQKHLD 127 usage_00890.pdb 106 QFEEKRLRFFREVLLEVQKHLD 127 usage_00905.pdb 101 AAERQRLLFFKDVLLTLHQHL- 121 usage_01008.pdb 108 QFEEKRLVFLKEVLLDIKRH-- 127 usage_01009.pdb 108 QFEEKRLVFLKEVLLDIKRH-- 127 usage_01010.pdb 108 QFEEKRLVFLKEVLLDIKRH-- 127 usage_01011.pdb 108 QFEEKRLRFFREVLLEVQKHLD 129 usage_01059.pdb 108 QFEEKRLVFLKEVLLDIKRH-- 127 usage_01060.pdb 108 QFEEKRLVFLKEVLLDIKRHLN 129 usage_01061.pdb 90 QFEEKRLVFLKEVLLDIKRH-- 109 usage_01138.pdb 96 QFEEKRLVFLKEVLLDIKRH-- 115 E RL F vLl h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################