################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:59 2021 # Report_file: c_0581_9.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00312.pdb # 2: usage_00313.pdb # 3: usage_00314.pdb # 4: usage_00315.pdb # 5: usage_00316.pdb # 6: usage_00587.pdb # 7: usage_00612.pdb # 8: usage_00613.pdb # # Length: 82 # Identity: 18/ 82 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 82 ( 36.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 82 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00312.pdb 1 ----KRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLL 56 usage_00313.pdb 1 --MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLL 58 usage_00314.pdb 1 ----KRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLL 56 usage_00315.pdb 1 --MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLL 58 usage_00316.pdb 1 --MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLL 58 usage_00587.pdb 1 ---MLQYRIIVDGRVQGVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFV 57 usage_00612.pdb 1 ---MLQYRIIVDGRVQGVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFV 57 usage_00613.pdb 1 VPQIQARQINIFGIVQGVGFRPFVFNIAQKYNLKGIVYNNSSGLY-IEVEGEEKDIEAFI 59 v G VQGVGFR FVq A G kN dG v aEG E al usage_00312.pdb 57 ERIKQG-PPAAEVEKVDYSFSE 77 usage_00313.pdb 59 ERIKQG-PPAAEVEKPDYS--- 76 usage_00314.pdb 57 ERIKQG-PPAAEVEKPDYSFSE 77 usage_00315.pdb 59 ERIKQG-PPAAEVEKDDYSFSE 79 usage_00316.pdb 59 ERIKQG-PPAAEVEKDDYSFSE 79 usage_00587.pdb 58 EAVKNG-SPFSKVTDISVTESR 78 usage_00612.pdb 58 EAVKNG-SPFSKVTDISVT--- 75 usage_00613.pdb 60 REIKENPPSLSVIDEIQVRE-- 79 e K g p v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################