################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:34 2021 # Report_file: c_1171_131.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_01051.pdb # 2: usage_01283.pdb # 3: usage_01573.pdb # 4: usage_01574.pdb # 5: usage_01575.pdb # 6: usage_01576.pdb # 7: usage_01712.pdb # 8: usage_01969.pdb # 9: usage_02008.pdb # 10: usage_02009.pdb # # Length: 74 # Identity: 0/ 74 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 74 ( 4.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 59/ 74 ( 79.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01051.pdb 1 GVVQDGNGAHQNEPQQWVLPSYSGRTGHNVHLAPAVAPTFP---GEQLLFFRSTMPGC-S 56 usage_01283.pdb 1 --------------------------------------------GEQLLFFRSNVPCA-G 15 usage_01573.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 usage_01574.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 usage_01575.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 usage_01576.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 usage_01712.pdb 1 ----------------------------------------------QVVFSMSFVQG--E 12 usage_01969.pdb 1 -----------------------------------------MMS-------VD-TVIPPG 11 usage_02008.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 usage_02009.pdb 1 --------------------------------------------GEQILFFRSFIPGA-S 15 s usage_01051.pdb 57 GY--PNMNLDCL-- 66 usage_01283.pdb 16 GV--SDGVIDCL-- 25 usage_01573.pdb 16 GH--TNGEMDCL-- 25 usage_01574.pdb 16 GH--TNGEMDCL-- 25 usage_01575.pdb 16 GH--TNGEMDCL-- 25 usage_01576.pdb 16 GH--TNGEMDCL-- 25 usage_01712.pdb 13 ESNDKIPVALGL-- 24 usage_01969.pdb 12 E---KVVNADISCQ 22 usage_02008.pdb 16 GH--TNGEMDCL-- 25 usage_02009.pdb 16 GH--TNGEMDCL-- 25 d l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################