################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:49 2021 # Report_file: c_0571_69.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00008.pdb # 2: usage_00062.pdb # 3: usage_00131.pdb # 4: usage_00408.pdb # 5: usage_00409.pdb # 6: usage_00742.pdb # # Length: 95 # Identity: 3/ 95 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 95 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 95 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ----------IRFNGGREI------AATRTQS-AFA-LVELAQIRA--DGE-PVFIAIGQ 39 usage_00062.pdb 1 -ISVI-----GTASSH---GTLEAIGKCRGDKKLLVKLQALLDDAGY-E---GGKLRICH 47 usage_00131.pdb 1 NIKPL-----LHV-ED---GALIPLEKWRGRKKVLKRMVELMGERG--DDLQKQTIGISH 49 usage_00408.pdb 1 -------IKPIGSTPQ---GTICQKEKARGKK-ALV-KADCVAADV--VNAGDKILAIAH 46 usage_00409.pdb 1 -----LNIKPIGSTPQ---GTICQKEKARGKK-ALV-KADCVAADV--VNAGDKILAIAH 48 usage_00742.pdb 1 ---PV-----LHFNEE---GKIVVYEKVRTEKKALKRLAEIVKETA-D--G-EYDIAIIH 45 k R k l I h usage_00008.pdb 40 NEAREAA-QLEELLRNALPEGSSFS---------- 63 usage_00062.pdb 48 VENEALADKIADIKQAYGTT------DVCVY---- 72 usage_00131.pdb 50 ADDEETALELKQMIEETHGC-----TRFFLSD--- 76 usage_00408.pdb 47 CNCEERAKEVQRLLKERFAV-----KSSFI----- 71 usage_00409.pdb 49 CNCEERAKEVQRLLKERFAV-----KSSFI----- 73 usage_00742.pdb 46 SRAQDKAEQLYNLLAKAGLK-----DDLEIVSFGG 75 A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################