################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:45:02 2021 # Report_file: c_0117_7.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00012.pdb # 5: usage_00027.pdb # 6: usage_00046.pdb # 7: usage_00064.pdb # 8: usage_00074.pdb # 9: usage_00081.pdb # 10: usage_00103.pdb # 11: usage_00104.pdb # 12: usage_00122.pdb # 13: usage_00123.pdb # 14: usage_00124.pdb # 15: usage_00125.pdb # 16: usage_00126.pdb # 17: usage_00149.pdb # # Length: 120 # Identity: 24/120 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/120 ( 25.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/120 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGR 59 usage_00006.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGR 59 usage_00007.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGR 59 usage_00012.pdb 1 QQVKQNSPSLSVQEGRISILNCDYTNSMFDYFLWYKKYPAEGPTFLISISSIKDKNADGR 60 usage_00027.pdb 1 --VKQNSPSLSVQEGRISILNCDYTNSMFDYFLWYKKYPAEGPTFLISISSIKDKNEDGR 58 usage_00046.pdb 1 QLLEQSPQFLSIQEGENLTVYCNSSSV-FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKR 59 usage_00064.pdb 1 QLLEQSPQFLSIQEGENLTVYCNSSSV-FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKR 59 usage_00074.pdb 1 -EDVEQSLFLSVREGDSSVINCTYTDSSSTYLYWYKQEPGAGLQLLTYIFSNMDMKQDQR 59 usage_00081.pdb 1 -QVRQSPQSLTVWEGETAILNCSYENSAFDAFPWYQQFPGEGPALLIAIRSVSDKKEDGR 59 usage_00103.pdb 1 -QVRQSPQSLTVWEGETTILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKEDGR 59 usage_00104.pdb 1 -QVRQSPQSLTVWEGETTILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKEDGR 59 usage_00122.pdb 1 --VRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR 58 usage_00123.pdb 1 --VRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR 58 usage_00124.pdb 1 -QVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR 59 usage_00125.pdb 1 QQVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR 60 usage_00126.pdb 1 QQVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR 60 usage_00149.pdb 1 --VRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGR 58 q L EG C f WY P egp L R usage_00005.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN-----AY-KVIFGKGTHLHVLP--- 110 usage_00006.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN-----AY-KVIFGKGTHLHVLP--- 110 usage_00007.pdb 60 FTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN-----AY-KVIFGKGTHLHVL---- 109 usage_00012.pdb 61 FTVFLNKSAKHLSLHIVPSQPGDSAVYFCAAMEGA-----Q--KLVFGQGTRLTINP--- 110 usage_00027.pdb 59 FTVFLNKSAKHLSLHIVPSQPGDSAVYFCAASSSAGGTSYG--KLTFGQGTILTVHP--- 113 usage_00046.pdb 60 LTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQ-----G--NLIFGKGTKLSVKP--- 109 usage_00064.pdb 60 LTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQ-----G--NLIFGKGTKLSVKP--- 109 usage_00074.pdb 60 LTVLLNKKDKHLSLRIADTQTGDSAIYFCAVSGGY-----Q--KVTFGIGTKLQVIP--- 109 usage_00081.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAASKGA-----D--RLTFGKGTQLIIQP--- 109 usage_00103.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAATGAN-----TG-KLTFGHGTILRVHP--- 110 usage_00104.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAATGAN-----TG-KLTFGHGTILRVHP--- 110 usage_00122.pdb 59 FTIFFNKREKKLSLHITDSQPGDSATYFCAASEGS-----GSWQLIFGSGTQLTVMP--- 110 usage_00123.pdb 59 FTIFFNKREKKLSLHITDSQPGDSATYFCAASETS-----GSWQLIFGSGTTVSVSP--- 110 usage_00124.pdb 60 FTIFFNKREKKLSLHITDSQPGDSATYFCAASETS-----GSWQLIFGSGTTVSVSP--- 111 usage_00125.pdb 61 FTIFFNKREKKLSLHITDSQPGDSATYFCAASETS-----GSWQLIFGSGTTVSVSP--- 112 usage_00126.pdb 61 FTIFFNKREKKLSLHITDSQPGDSATYFCAASETS-----GSWQLIFGSGTTVSVSP--- 112 usage_00149.pdb 59 FTIFFNKREKKFSLHIADSQPGDSATYFCAASD-------N--RIFFGDGTQLVVKPNIQ 109 T K SLhI QpGD Y CA FG GT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################