################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:43:40 2021 # Report_file: c_0460_1.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00008.pdb # 8: usage_00011.pdb # 9: usage_00012.pdb # 10: usage_00013.pdb # 11: usage_00014.pdb # 12: usage_00015.pdb # 13: usage_00016.pdb # 14: usage_00019.pdb # 15: usage_00020.pdb # 16: usage_00022.pdb # 17: usage_00023.pdb # 18: usage_00024.pdb # 19: usage_00025.pdb # 20: usage_00026.pdb # 21: usage_00027.pdb # 22: usage_00028.pdb # 23: usage_00029.pdb # 24: usage_00030.pdb # 25: usage_00031.pdb # 26: usage_00032.pdb # 27: usage_00035.pdb # 28: usage_00036.pdb # # Length: 107 # Identity: 21/107 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/107 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/107 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------------------TNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDK 41 usage_00002.pdb 1 KRVIMRVDFNVPMK-NNQITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDK 59 usage_00004.pdb 1 ------VDFNVPMK-NNQITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDK 53 usage_00005.pdb 1 -RVIMRVDFNVPMK-NNQITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDK 58 usage_00006.pdb 1 -RVFIRVDFNVPLD-GKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEK- 57 usage_00007.pdb 1 -RVFCRVDFNVP---G-KITDETRIRAALPTIQYLVEQGA-KVILASHLGRPKGQAV-EE 53 usage_00008.pdb 1 -RVVMRVDFNVPMA-AAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDK 58 usage_00011.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00012.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00013.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00014.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00015.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00016.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00019.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00020.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00022.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00023.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00024.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00025.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00026.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00027.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00028.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00029.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00030.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00031.pdb 1 KRVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 59 usage_00032.pdb 1 -RVVMRVDFNVPMK-NNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDK 58 usage_00035.pdb 1 ------VDFNVPLD-GKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGERNEK- 52 usage_00036.pdb 1 -KVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGC-SVILASHLGRPK-EIS-SK 56 T RI aA P I l V L SHLGrP usage_00001.pdb 42 YSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLE-- 86 usage_00002.pdb 60 YSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIIL---- 102 usage_00004.pdb 54 YSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILL--- 97 usage_00005.pdb 59 YSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIIL---- 101 usage_00006.pdb 58 YSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLE-- 102 usage_00007.pdb 54 LRLTPVAARLGELLGKDVKKADEAFGPVAQEVAA--NEGDVLV---- 94 usage_00008.pdb 59 YSLQPVAAELKSALGKAVLFLKDCVGPAVEKACADPAAGSVIL---- 101 usage_00011.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00012.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00013.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00014.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00015.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00016.pdb 60 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 102 usage_00019.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00020.pdb 60 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 102 usage_00022.pdb 60 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 102 usage_00023.pdb 60 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 102 usage_00024.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00025.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00026.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00027.pdb 60 YSLEPVAAELKSLLGKDVLFLKDCVGPEVENACANPAAGTVIL---- 102 usage_00028.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00029.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00030.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00031.pdb 60 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 102 usage_00032.pdb 59 YSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVIL---- 101 usage_00035.pdb 53 YSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASA-PGSVILLEN 98 usage_00036.pdb 57 YSLEPVAKRLARLLDKEIV-AKDVIGEDAKTKAN-LKAGEILLL--- 98 ysL PVA L lL K v d Gp g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################