################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:23 2021 # Report_file: c_1115_103.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00342.pdb # 2: usage_00403.pdb # 3: usage_01401.pdb # 4: usage_01402.pdb # 5: usage_01403.pdb # 6: usage_01404.pdb # 7: usage_01427.pdb # 8: usage_01428.pdb # 9: usage_01429.pdb # 10: usage_01430.pdb # 11: usage_01431.pdb # 12: usage_01731.pdb # 13: usage_01732.pdb # 14: usage_01733.pdb # 15: usage_01734.pdb # # Length: 65 # Identity: 5/ 65 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 65 ( 29.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 65 ( 18.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 PEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQR 60 usage_00403.pdb 1 KFDVGDWLESIHLGE--HRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALR- 57 usage_01401.pdb 1 -FSITQFVRNLGLEH--LMDIFEREQITLRVLVEMGHKELKEIGINAYGHREKLIKGVER 57 usage_01402.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01403.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01404.pdb 1 ---ISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 55 usage_01427.pdb 1 ---ISQFLKSLGLEH--LRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVER 55 usage_01428.pdb 1 ---ISQFLKSLGLEH--LRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVER 55 usage_01429.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01430.pdb 1 ---ISQFLKSLGLEH--LRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVER 55 usage_01431.pdb 1 ---ISQFLKSLGLEH--LRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVER 55 usage_01731.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01732.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01733.pdb 1 --NISQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 56 usage_01734.pdb 1 ----SQFLKSLGLEH--LRDIFETEQITLRVLADMGHEELKEIGINAYGHRHKLIKGVER 54 fl gle l d fe It L e G GhR kl usage_00342.pdb 61 LVQIH 65 usage_00403.pdb ----- usage_01401.pdb 58 LISGQ 62 usage_01402.pdb 57 L---- 57 usage_01403.pdb ----- usage_01404.pdb 56 LLG-- 58 usage_01427.pdb 56 L---- 56 usage_01428.pdb 56 LLG-- 58 usage_01429.pdb 57 LL--- 58 usage_01430.pdb 56 LLG-- 58 usage_01431.pdb 56 LLGG- 59 usage_01731.pdb 57 LL--- 58 usage_01732.pdb 57 L---- 57 usage_01733.pdb 57 LL--- 58 usage_01734.pdb 55 LL--- 56 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################