################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:42 2021 # Report_file: c_1159_71.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00559.pdb # 3: usage_00708.pdb # 4: usage_00709.pdb # 5: usage_00710.pdb # 6: usage_01531.pdb # 7: usage_01769.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 60 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 60 ( 71.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ------------------SQQTIIPNIG--SRPLVRGQSGRISIYWTIVKPGDILMINSN 40 usage_00559.pdb 1 QTIIRDCQVDK-------QTRELVYINKIMNTQ--LT-KPVLMMFNIS------------ 38 usage_00708.pdb 1 QTIIRDCQVDK-------QTRELVYINKIMNTM--LT-KPVLMMF--------------- 35 usage_00709.pdb 1 QTIIRDCQVDK-------QTRELVYINKIMNTM--LT-KPVLMMF--------------- 35 usage_00710.pdb 1 QTIIRDCQVDK-------QTRELVYINKIMNTM--LT-KPVLMMF--------------- 35 usage_01531.pdb 1 -LTFRILTGV-AKQNHNLRILRIHISS-D------S--DLFFLHT----------LEVS- 38 usage_01769.pdb 1 QTIIRDCQVDK-------QTRELVYINKIMNTQ--LT-KPVLMMFNIS------------ 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################