################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:31 2021 # Report_file: c_1023_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00037.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_01216.pdb # 6: usage_01306.pdb # # Length: 82 # Identity: 12/ 82 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 82 ( 29.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 82 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00037.pdb 1 ---RLGIVVKRKF-GKATRRNKLKRWVREIFRRNKGVIPKGFD-IVVIPRKKLSEEFERV 55 usage_00038.pdb 1 DYSRLGIVVKRKF-GKATRRNKLKRWVREIFRRNKGVIPKGFD-IVVIPRKKLSEEFERV 58 usage_00039.pdb 1 -YSRLGIVVKRKF-GKATRRNKLKRWVREIFRRNKGVIPKGFD-IVVIPRKKLSEEFERV 57 usage_00040.pdb 1 -YSRLGIVVKRKF-GKATRRNKLKRWVREIFRRNKGVIPKGFD-IVVIPRKKLSEEFERV 57 usage_01216.pdb 1 -ELRVGLSVSKKI-GNAVMRNRIKRLIRQAFLEEKERLKEKDYIIIAR------KAASQL 52 usage_01306.pdb 1 GHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELP-AMD-FVVVAKKGVADL-D-- 55 R G V K g A RN KR Re Fr k p d ivv usage_00037.pdb 56 --DFWTVREKLL-NLLKRI--- 71 usage_00038.pdb 59 --DFWTVREKLL-NLLKRI--- 74 usage_00039.pdb 58 --DFWTVREKLL-NLLKRI--- 73 usage_00040.pdb 58 --DFWTVREKLL-NLLKRI--- 73 usage_01216.pdb 53 --TYEETKKSLQ-HLWRKSS-- 69 usage_01306.pdb 56 NRALSEALEKLWRRHCRLA-RG 76 ekL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################