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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:30:58 2021
# Report_file: c_1119_29.html
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#====================================
# Aligned_structures: 6
#   1: usage_00052.pdb
#   2: usage_00179.pdb
#   3: usage_00180.pdb
#   4: usage_00211.pdb
#   5: usage_00253.pdb
#   6: usage_00254.pdb
#
# Length:        127
# Identity:      122/127 ( 96.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    122/127 ( 96.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            5/127 (  3.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00052.pdb         1  ---LSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   57
usage_00179.pdb         1  --GLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   58
usage_00180.pdb         1  PLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   60
usage_00211.pdb         1  --GLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   58
usage_00253.pdb         1  PLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   60
usage_00254.pdb         1  ---LSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG   57
                              LSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSG

usage_00052.pdb        58  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  117
usage_00179.pdb        59  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  118
usage_00180.pdb        61  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  120
usage_00211.pdb        59  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  118
usage_00253.pdb        61  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  120
usage_00254.pdb        58  TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST  117
                           TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVST

usage_00052.pdb       118  LVGTL--  122
usage_00179.pdb       119  LVGTLYD  125
usage_00180.pdb       121  LVGTLYD  127
usage_00211.pdb       119  LVGTL--  123
usage_00253.pdb       121  LVGTLYD  127
usage_00254.pdb       118  LVGTL--  122
                           LVGTL  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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