################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:31 2021 # Report_file: c_0988_22.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00038.pdb # 4: usage_00101.pdb # 5: usage_00219.pdb # # Length: 50 # Identity: 7/ 50 ( 14.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 50 ( 24.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 50 ( 28.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 IKEVRG--NGKLKVAVFSDPDCPFCKRLEHEFEK----T-DVTVYSFPIA 43 usage_00037.pdb 1 IKEVRG--NGKLKVAVFSDPDCPFCKRLEHEFEK----T-DVTVYSFPIA 43 usage_00038.pdb 1 IKEVRG--NGKLKVAVFSDPDCPFCKRLEHEFEK----T-DVTVYSFPIA 43 usage_00101.pdb 1 --SLYGDAKARWTINEYADLECPFCKVYTPRLKRWVDSHPDVNLVW---- 44 usage_00219.pdb 1 --LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGK-VQLRT---- 43 G v vf Dp CPfCK V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################