################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:58 2021 # Report_file: c_1434_142.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01245.pdb # 2: usage_02490.pdb # 3: usage_02495.pdb # 4: usage_03496.pdb # # Length: 79 # Identity: 67/ 79 ( 84.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 79 ( 84.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 79 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01245.pdb 1 SNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLF 60 usage_02490.pdb 1 ---EKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLF 57 usage_02495.pdb 1 -NEEKLNLCRKYYL-G--FLPFLWLVNIFWFFREAFLV-AYTEQSQIKGYVWRSAVGFLF 55 usage_03496.pdb 1 --EEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLF 58 EKLNLCRKYYL G FLPFLWLVNIFWFFREAFLV AYTEQSQIKGYVWRSAVGFLF usage_01245.pdb 61 WVIVLTSWITIFQIYRPRW 79 usage_02490.pdb 58 WVIVLTSWITIFQI----- 71 usage_02495.pdb 56 WVIVLTSWITIFQI----- 69 usage_03496.pdb 59 WVIVLTSWITIFQI----- 72 WVIVLTSWITIFQI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################