################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:27 2021 # Report_file: c_0245_13.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00080.pdb # 2: usage_00081.pdb # 3: usage_00220.pdb # 4: usage_00221.pdb # # Length: 138 # Identity: 80/138 ( 58.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/138 ( 58.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/138 ( 23.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 SGVHTLHGRSIAFATGIKLSNPSLEVIVNVGDGDGLGIGMGHFVHLGRRNIDIAVLVHNN 60 usage_00081.pdb 1 SGVHTLHGRSIAFATGIKLSNPSLEVIVNVGDGDGLGIGMGHFVHLGRRNIDIAVLVHNN 60 usage_00220.pdb 1 SGVHTLHGRAIAFATGIKLSNPDLVVIVNGGDGDLLGIGAGHFVAAGRRNVDMVVILHDN 60 usage_00221.pdb 1 SGVHTLHGRAIAFATGIKLSNPDLVVIVNGGDGDLLGIGAGHFVAAGRRNVDMVVILHD- 59 SGVHTLHGR IAFATGIKLSNP L VIVN GDGD LGIG GHFV GRRN D V H usage_00080.pdb 61 GVYGLTKGQASPTLHRGEKTKSLPKPNIMDAVNPLAVALAAGYTFVARGYAYDVMHLKEL 120 usage_00081.pdb 61 GVYGL---QASPTLHRGE--------NIMDAVNPLAVALAAGYTFVARGYAYDVMHLKEL 109 usage_00220.pdb 61 GVYGLTKGQASPTLKRGE--------NINDAVNPIALAISSGYTFVARGYAYDVKHLKEL 112 usage_00221.pdb 60 ----------------------------NDAVNPIALAISSGYTFVARGYAYDVKHLKEL 91 DAVNP A A GYTFVARGYAYDV HLKEL usage_00080.pdb 121 IKKAILHKGSALVD---- 134 usage_00081.pdb 110 IKKAILHKGSALVD---- 123 usage_00220.pdb 113 IKSAIKHKGLALIDVLQP 130 usage_00221.pdb 92 IKSAIKHKGLALID---- 105 IK AI HKG AL D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################