################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:05 2021 # Report_file: c_0055_6.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00126.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # 7: usage_00223.pdb # 8: usage_00224.pdb # 9: usage_00287.pdb # 10: usage_00313.pdb # 11: usage_00389.pdb # # Length: 207 # Identity: 36/207 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/207 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/207 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00126.pdb 1 NFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT 60 usage_00218.pdb 1 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 60 usage_00219.pdb 1 -FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 59 usage_00220.pdb 1 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 60 usage_00221.pdb 1 -FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 59 usage_00222.pdb 1 -FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 59 usage_00223.pdb 1 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 60 usage_00224.pdb 1 -FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 59 usage_00287.pdb 1 -LEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGS 59 usage_00313.pdb 1 DWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGA 60 usage_00389.pdb 1 -WDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGA 59 Lv gt i GTTgEs tl E vv v r pvIagtG usage_00126.pdb 61 NDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGR 120 usage_00218.pdb 61 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 119 usage_00219.pdb 60 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 118 usage_00220.pdb 61 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 119 usage_00221.pdb 60 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 118 usage_00222.pdb 60 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 118 usage_00223.pdb 61 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 119 usage_00224.pdb 60 NNTHASIDLTKKATEV-GVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR 118 usage_00287.pdb 60 NSTREAIHATEQGFAV-GMHAALHINPYYGKTSIEGLIAHFQSVLHMG-P-TIIYNVPGR 116 usage_00313.pdb 61 NSTREAVALTEAAKSG-GADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGR 119 usage_00389.pdb 60 NSTREAVALTEAAKSG-GADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGR 118 N T t G A PYYnKp qEGmyqHF ia YNvPGR usage_00126.pdb 121 VVVELTPETMLRLADHPNIIGVKECT-SLANMAYLIEHKPEEFLIYTGEDGDAFHAM-NL 178 usage_00218.pdb 120 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 178 usage_00219.pdb 119 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 177 usage_00220.pdb 120 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 178 usage_00221.pdb 119 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 177 usage_00222.pdb 119 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 177 usage_00223.pdb 120 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 178 usage_00224.pdb 119 SIVQISVDTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPAM-AV 177 usage_00287.pdb 117 TGQDIPPRAIFKLSQNPNLAGVKECV-GNKRVEEYTENG---VVVWSGNDDECHDSRWDY 172 usage_00313.pdb 120 TSCDMLPETVERLSKVPNIIGIKEATGDLQRAKEVIERVGKDFLVYSGDDATAVELM-LL 178 usage_00389.pdb 119 TSCDMLPETVERLSKVPNIIGIKEATGDLQRAKEVIERVGKDFLVYSGDDATAVELM-LL 177 t rLs Ni K e iE f vysG D m usage_00126.pdb 179 GADGVISVASHTNGDEMHEMFTAIA-- 203 usage_00218.pdb 179 GAKGIVSVASHVIGNEMQEMIAAFQAG 205 usage_00219.pdb 178 GAKGIVSVASHVIGNEMQEMIAAFQAG 204 usage_00220.pdb 179 GAKGIVSVASHVIGNEMQEMIAAFQAG 205 usage_00221.pdb 178 GAKGIVSVASHVIGNEMQEMIAAFQAG 204 usage_00222.pdb 178 GAKGIVSVASHVIGNEMQEMIAAFQAG 204 usage_00223.pdb 179 GAKGIVSVASHVIGNEMQEMIAAFQAG 205 usage_00224.pdb 178 GAKGIVSVASHVIGNEMQEMIAAFQAG 204 usage_00287.pdb 173 GATGVISVTSNLVPGLMRKLM------ 193 usage_00313.pdb 179 GGKGNISVTANVAPRAMSDLCAAAMRG 205 usage_00389.pdb 178 GGKGNISVTANVAPRAMSDLCAAAMRG 204 G G SV M #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################