################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:35:09 2021 # Report_file: c_0895_7.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00013.pdb # 7: usage_00014.pdb # 8: usage_00015.pdb # 9: usage_00040.pdb # 10: usage_00041.pdb # 11: usage_00066.pdb # 12: usage_00069.pdb # 13: usage_00104.pdb # 14: usage_00130.pdb # 15: usage_00168.pdb # 16: usage_00282.pdb # # Length: 68 # Identity: 11/ 68 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 68 ( 23.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 68 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00009.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00010.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00011.pdb 1 -VDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 58 usage_00012.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00013.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00014.pdb 1 -VDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 58 usage_00015.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00040.pdb 1 -VGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLRI-GVTLAGHQKKILASVQ--- 55 usage_00041.pdb 1 -VGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLRI-GVTLAGHQKKILASVQ--- 55 usage_00066.pdb 1 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRV-GVTLAGHQKKILNSIQVMR 59 usage_00069.pdb 1 TVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRI-GITLAGHQKKILNSIHSMR 59 usage_00104.pdb 1 -----LDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRAL-GITLMGHQKKILGSIQTMR 54 usage_00130.pdb 1 --AEWLDSIELGDYTKAFLINGYTSMDLLKKIAEVELINVLKINLIGHRKRILASLG--- 55 usage_00168.pdb 1 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRI-GVRLPGHQKRIAYSLLGLK 59 usage_00282.pdb 1 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRI-GVRLPGHQKRIAYSLLGLK 59 L I m Y F G v d g L GHqK I S usage_00008.pdb 60 AQMNQIQS 67 usage_00009.pdb 60 AQMNQIQS 67 usage_00010.pdb 60 AQMNQIQS 67 usage_00011.pdb 59 AQMNQIQS 66 usage_00012.pdb 60 AQMNQIQS 67 usage_00013.pdb 60 AQMNQIQS 67 usage_00014.pdb 59 AQMNQ--- 63 usage_00015.pdb 60 AQMNQIQS 67 usage_00040.pdb -------- usage_00041.pdb -------- usage_00066.pdb 60 AQMNQIQ- 66 usage_00069.pdb 60 VQ------ 61 usage_00104.pdb 55 AQL----- 57 usage_00130.pdb -------- usage_00168.pdb 60 DQV----- 62 usage_00282.pdb 60 DQVNT--- 64 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################