################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:12 2021 # Report_file: c_1254_104.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00105.pdb # 2: usage_00141.pdb # 3: usage_00162.pdb # 4: usage_00163.pdb # 5: usage_00604.pdb # 6: usage_00902.pdb # 7: usage_00937.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 55 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 55 ( 78.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 -T-----E----------VA----G-ESHIVDH--R-G-IIDNVYV-------TN 23 usage_00141.pdb 1 NS-LLFVYGT-LR--KH-----EKN-HHLLA-----QS----ACINEQARTK--- 33 usage_00162.pdb 1 ---RILLTKTD--VAG-------EA-EKLHERLARINA-R-APVYT-------VT 33 usage_00163.pdb 1 ---RILLTKTD--VAG-------EA-EKLHERLARINA-R-APVYT-------VT 33 usage_00604.pdb 1 --ALTLYQ----------RDDCHLC-DQAVEALAQARA-GAFFSVF-------I- 33 usage_00902.pdb 1 --DVFLADT-R--I---I----NRLPKALGKTFYKT-TT--KRPIP-------VV 33 usage_00937.pdb 1 ---SINVLGEYNI--G------GDA-WEMDRVLEKIGY----HVNAT----LT-- 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################