################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:37:08 2021 # Report_file: c_0674_1.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00019.pdb # 2: usage_00025.pdb # 3: usage_00026.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00206.pdb # 7: usage_00234.pdb # # Length: 69 # Identity: 7/ 69 ( 10.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 69 ( 34.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 69 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 --AVFFAGNEYWIYSA--STLERGYPKPLTS-LG---LPPDVQRVDAAFNWSKNKKTYIF 52 usage_00025.pdb 1 --VRFFKGNKYWAVQG--QNVLHGYPKDIYSSFG---FPRTVKHIDAALSEENTGKTYFF 53 usage_00026.pdb 1 --VRFFKGNKYWAVQG--QNVLHGYPKDIYSSFG---FPRTVKHIDAALSEENTGKTYFF 53 usage_00046.pdb 1 DEVRFFKGNKYWAVQG--QNVLHGYPKDIYSSFG---FPRTVKHIDAALSEENTGKTYFF 55 usage_00047.pdb 1 DEVRFFKGNKYWAVQG--QNVLHGYPKDIYSSFG---FPRTVKHIDAALSEENTGKTYFF 55 usage_00206.pdb 1 --IFIFRGRKFWALNG--YDILEGYPKKISE-LG---LPKEVKKISAAVHFEDTGKTLLF 52 usage_00234.pdb 1 --VYLFKGDQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFF 58 F G yw gypK i s g p v dAA t kty F usage_00019.pdb 53 AGDKFWRYN 61 usage_00025.pdb 54 VANKYWRYD 62 usage_00026.pdb 54 VANKYWRYD 62 usage_00046.pdb 56 VANKYWRYD 64 usage_00047.pdb 56 VANKYWRYD 64 usage_00206.pdb 53 SGNQVWRYD 61 usage_00234.pdb 59 KDDHYARV- 66 wRy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################