################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:35 2021 # Report_file: c_1097_55.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00067.pdb # 2: usage_00259.pdb # 3: usage_00280.pdb # 4: usage_00281.pdb # 5: usage_00435.pdb # 6: usage_00520.pdb # # Length: 62 # Identity: 2/ 62 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 62 ( 54.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00067.pdb 1 SPEFREPLIATAVKFLQN-SRVRQSPLATRRAFLKKKGLTDEEIDLAFQ----------- 48 usage_00259.pdb 1 -------SIR---------------ELGIGLNFLKVSG-SYKDIAKKENLSRAKVTRAFQ 37 usage_00280.pdb 1 --SEREKRVSNAVEFLLD-SRVRRTPTSSKVHFLKSKGLSAEEICEAFT----------- 46 usage_00281.pdb 1 ---EREKRVSNAVEFLLD-SRVRRTPTSSKVHFLKSKGLSAEEICEAFT----------- 45 usage_00435.pdb 1 ----REPLIATAVKFLQN-SRVRQSPLATRRAFLKKKGLTDEEIDMAFQ----------- 44 usage_00520.pdb 1 ----SENVEEKLKEFVKRHQ---RITQEELHQYAQRLGLNEEAIRQFFE----------- 42 flk G e I f usage_00067.pdb 49 QS 50 usage_00259.pdb 38 AA 39 usage_00280.pdb 47 KV 48 usage_00281.pdb 46 KV 47 usage_00435.pdb 45 QS 46 usage_00520.pdb 43 EF 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################