################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:13:34 2021 # Report_file: c_0147_19.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00038.pdb # 4: usage_00099.pdb # 5: usage_00100.pdb # 6: usage_00119.pdb # 7: usage_00134.pdb # 8: usage_00193.pdb # 9: usage_00202.pdb # 10: usage_00204.pdb # 11: usage_00205.pdb # 12: usage_00206.pdb # 13: usage_00262.pdb # 14: usage_00282.pdb # 15: usage_00299.pdb # 16: usage_00307.pdb # 17: usage_00308.pdb # 18: usage_00313.pdb # 19: usage_00331.pdb # 20: usage_00357.pdb # 21: usage_00358.pdb # 22: usage_00359.pdb # 23: usage_00387.pdb # 24: usage_00388.pdb # 25: usage_00536.pdb # 26: usage_00543.pdb # 27: usage_00544.pdb # 28: usage_00545.pdb # 29: usage_00546.pdb # 30: usage_00551.pdb # 31: usage_00552.pdb # 32: usage_00553.pdb # 33: usage_00554.pdb # 34: usage_00625.pdb # 35: usage_00658.pdb # 36: usage_00667.pdb # 37: usage_00721.pdb # 38: usage_00722.pdb # # Length: 123 # Identity: 42/123 ( 34.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/123 ( 51.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/123 ( 10.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 VQLQQSGAEVVRSGASVKLSCTASGFNIKDYYIHWVKQRPEKGLEWIGWIDPEIGDTEYV 60 usage_00002.pdb 1 VQLQQSGAEVVRSGASVKLSCTASGFNIKDYYIHWVKQRPEKGLEWIGWIDPEIGDTEYV 60 usage_00038.pdb 1 -QLQQSGAELVRPGASVKLSCTASGFNIKDDFMHWVKQRPEQGLEWIGRIDPANDNTKYA 59 usage_00099.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00100.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00119.pdb 1 -QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYD 59 usage_00134.pdb 1 VKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYA 60 usage_00193.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYD 60 usage_00202.pdb 1 -QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPKQGLEWIGRIDPANVDTKYD 59 usage_00204.pdb 1 -LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYD 59 usage_00205.pdb 1 -LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYD 59 usage_00206.pdb 1 -LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYD 59 usage_00262.pdb 1 VQLLESGAVLARPGTSVKISCKASGFNIKDYYMHWVKQRPGQGLEWIGGNDPANGHSMYD 60 usage_00282.pdb 1 VQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYV 60 usage_00299.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPLNDKTKYD 60 usage_00307.pdb 1 VQLQQSGAEVVRSGASVKLSCTASGFNIKDYYIHWVKQRPEKGLEWIGWIDPEIGDTEYV 60 usage_00308.pdb 1 VQLQQSGAEVVRSGASVKLSCTASGFNIKDYYIHWVKQRPEKGLEWIGWIDPEIGDTEYV 60 usage_00313.pdb 1 VQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLELIGWIDPENGNTIYD 60 usage_00331.pdb 1 IQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTRYG 60 usage_00357.pdb 1 VQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYV 60 usage_00358.pdb 1 VQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYV 60 usage_00359.pdb 1 -QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQKPEQGLEWIAQIDPANGNTKYD 59 usage_00387.pdb 1 -QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQKPEQGLEWIAQIDPANGNTKYD 59 usage_00388.pdb 1 VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPLNDKTKYD 60 usage_00536.pdb 1 VQLQQSGADLVRPGASVKLSCTASGFDIKDDYVHWVKQRPEQGLEWIGRIDPANGATKYA 60 usage_00543.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00544.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00545.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00546.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00551.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00552.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00553.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00554.pdb 1 -QLQQSGAELVKPGASVKLSCTPSGFNIKDIYMQWVKQRPEQGLEWIGRIDPANDKTKYD 59 usage_00625.pdb 1 VQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKFD 60 usage_00658.pdb 1 KLLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYD 60 usage_00667.pdb 1 -QLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPKQGLEWIGRIDPANVDTKYD 59 usage_00721.pdb 1 VQLQQSGDELVKPGASVKLSCTVSGFNIKDDFIHWMKQRPEQGLEWIGRIDPANGYTKYA 60 usage_00722.pdb 1 VQLQQSGDELVKPGASVKLSCTVSGFNIKDDFIHWMKQRPEQGLEWIGRIDPANGYTKYA 60 L qSG v G sV lSC SGfnIKD W kQ P GLEwI iDP y usage_00001.pdb 61 PKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNAGH--DY-D-RGRF-PYWGQGTLV 115 usage_00002.pdb 61 PKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNAGH--DY-D-RGRF-PYWGQGTLV 115 usage_00038.pdb 60 PKFQDKATIIADTSSNTAYLQLSSLTSEDTAVYYCARRE--VY-SYYSPL-DVWGAGTTV 115 usage_00099.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL--Y--D-YYAM-DYWGQGTSV 114 usage_00100.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL--Y--D-YYAM-DYWGQGTSV 114 usage_00119.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASY----------YG-IYWGQGTTL 108 usage_00134.pdb 61 PKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGT--PT-G-PYYF-DYWGQGTTV 115 usage_00193.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPL--Y--D-YYAM-DYWGQGTSV 114 usage_00202.pdb 60 PKFQDKATITADTSSKTTYLQLSSLTSEDTAVYYCASY----------YG-IYWGQGTTL 108 usage_00204.pdb 60 PKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGW--------EGF-AYWGQGTLV 110 usage_00205.pdb 60 PKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGW--------EGF-AYWGQGTLV 110 usage_00206.pdb 60 PKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGW--------EGF-AYWGQGTLV 110 usage_00262.pdb 61 PKFQGRVTITADTSTSTVFMELSSLRSEDTAVYYCARDS--G-----YAM-DYWGQGTLV 112 usage_00282.pdb 61 PKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG--YY-VSDYAM-AYWGQGTSV 116 usage_00299.pdb 61 PKFQGKATITADTSSNSAYLQLSSLTSEDTAVYYCSRGG--G----DPVF-VYWGQGTLV 113 usage_00307.pdb 61 PKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNAGH--DY-D-RGRF-PYWGQGTLV 115 usage_00308.pdb 61 PKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNAGH--DY-D-RGRF-PYWGQGTLV 115 usage_00313.pdb 61 PKFQDKASITADTSSNTAYLQLSSLTSEDTAVYYCARDT--A-----AYF-DYWGQGTTL 112 usage_00331.pdb 61 PKFLGKATITADTSSNTAYLHLNSLTSEDTAVYFCARWV--------RQM-DYWGQGTSV 111 usage_00357.pdb 61 PKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG--YY-VSDYAM-AYWGQGTSV 116 usage_00358.pdb 61 PKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG--YY-VSDYAM-AYWGQGTSV 116 usage_00359.pdb 60 PKFQGKATITADTSSNTAYLHLSSLTSEDSAVYYCAADPPYY------GHGDYWGQGTTL 113 usage_00387.pdb 60 PKFQGKATITADTSSNTAYLHLSSLTSEDSAVYYCAADPPYY------GHGDYWGQGTTL 113 usage_00388.pdb 61 PKFQGKATITADTSSNSAYLQLSSLTSEDTAVYYCSRGG--G----DPVF-VYWGQGTLV 113 usage_00536.pdb 61 PKFQDKATLTADTSSNTAYLQLSSLTSEDTAVYYCGRS---------KYF-DSWGQGTTL 110 usage_00543.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00544.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00545.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00546.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00551.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00552.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00553.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00554.pdb 60 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASEG--HYGYDGYAM-DYWGQGTTV 116 usage_00625.pdb 61 PKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGV--F-----GFF-DYWGQGTTL 112 usage_00658.pdb 61 PKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGW--------EGF-AYWGQGTLV 111 usage_00667.pdb 60 PKFQDKATITADTSSKTTYLQLSSLTSEDTAVYYCASY----------YG-IYWGQGTTL 108 usage_00721.pdb 61 PKFQDKATMTADTSSNTAYLQLSSLASEDAAVYYCATY----------GV-AYWGQGTLV 109 usage_00722.pdb 61 PKFQDKATMTADTSSNTAYLQLSSLASEDAAVYYCATY----------GV-AYWGQGTLV 109 PKFq kat taDTSs yl L SL S D AVYyC WGqGT usage_00001.pdb 116 TVS 118 usage_00002.pdb 116 TVS 118 usage_00038.pdb 116 TVP 118 usage_00099.pdb 115 TVS 117 usage_00100.pdb 115 TVS 117 usage_00119.pdb 109 TVS 111 usage_00134.pdb 116 TVS 118 usage_00193.pdb 115 TVS 117 usage_00202.pdb 109 TVS 111 usage_00204.pdb 111 TVS 113 usage_00205.pdb 111 TV- 112 usage_00206.pdb 111 TVS 113 usage_00262.pdb 113 TVS 115 usage_00282.pdb 117 TVS 119 usage_00299.pdb 114 TVS 116 usage_00307.pdb 116 TVS 118 usage_00308.pdb 116 TVS 118 usage_00313.pdb 113 TVS 115 usage_00331.pdb 112 TVS 114 usage_00357.pdb 117 TVS 119 usage_00358.pdb 117 TV- 118 usage_00359.pdb 114 TVS 116 usage_00387.pdb 114 TVS 116 usage_00388.pdb 114 TVS 116 usage_00536.pdb 111 TVS 113 usage_00543.pdb 117 TVS 119 usage_00544.pdb 117 TVS 119 usage_00545.pdb 117 TVS 119 usage_00546.pdb 117 TVS 119 usage_00551.pdb 117 TVS 119 usage_00552.pdb 117 TVS 119 usage_00553.pdb 117 TVS 119 usage_00554.pdb 117 TVS 119 usage_00625.pdb 113 TV- 114 usage_00658.pdb 112 TV- 113 usage_00667.pdb 109 TVS 111 usage_00721.pdb 110 TV- 111 usage_00722.pdb 110 TV- 111 TV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################