################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:38 2021 # Report_file: c_1414_28.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00212.pdb # 2: usage_00285.pdb # 3: usage_00286.pdb # 4: usage_00287.pdb # 5: usage_00288.pdb # 6: usage_00289.pdb # 7: usage_00328.pdb # 8: usage_00329.pdb # 9: usage_00626.pdb # 10: usage_00627.pdb # # Length: 60 # Identity: 4/ 60 ( 6.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 60 ( 48.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 60 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00212.pdb 1 -EPLIATAVKFLQNSRVRQSPLATRRAFLKKKG-L-TDEEIDMAFQQSG----------- 46 usage_00285.pdb 1 ------ALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRKEQQIMVSKGEELF 51 usage_00286.pdb 1 ------ALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRKEQQIMVSKGEELF 51 usage_00287.pdb 1 -EEQKKALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRK------------- 43 usage_00288.pdb 1 SEEQKKALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFR--------------- 42 usage_00289.pdb 1 SEEQKKALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRK------------- 44 usage_00328.pdb 1 SEEQKKALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRKEQQIG-------- 49 usage_00329.pdb 1 SEEQKKALDLAFYFDR--RL-TPEWRRYLSQRLGLNEEQIERWFRRKEQQIG-------- 49 usage_00626.pdb 1 -EEQKKALDLAFYFDR--YL-TPEWRRYLSQRLGLNEAQIKIWFQNKRAKIKKS------ 50 usage_00627.pdb 1 -EEQKKALDLAFYFDR--YL-TPEWRRYLSQRLGLNEAQIKIWFQNKRAKIKK------- 49 aldlafyfdR l tpewRryLsqrl L e qi wf #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################