################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:11 2021 # Report_file: c_0406_39.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00021.pdb # 2: usage_00103.pdb # 3: usage_00127.pdb # 4: usage_00128.pdb # 5: usage_00129.pdb # 6: usage_00144.pdb # 7: usage_00172.pdb # 8: usage_00268.pdb # # Length: 110 # Identity: 4/110 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/110 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/110 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 AEVLFREN------NPTVLECIIEGNDQGVKYSWKKDGKSYNWQ-----E-H-NAA-LRK 46 usage_00103.pdb 1 -DLIVSKG------EPATLNCKAEGR-PTPTIEWYKGGERVETDKDDP-R-S-HRM-L-L 47 usage_00127.pdb 1 -DLVVKKN------EPATLNCKVEGK-PEPTIEWFKDGEPVSTN---EKK-S-HRV-Q-F 45 usage_00128.pdb 1 -DLVVKKN------EPATLNCKVEGK-PEPTIEWFKDGEPVSTN---EKK-S-HRV-Q-F 45 usage_00129.pdb 1 -DLVVKKN------EPATLNCKVEGK-PEPTIEWFKDGEPVSTN---EKK-S-HRV-Q-F 45 usage_00144.pdb 1 MIYWECS--------NATLTCEVLEG-TDVELKLYQGKEHLR-------------SL--- 35 usage_00172.pdb 1 -NVKIIEG------LKAVLPCTTMGN-PKPSVSWIKGDSALRE--------NSRIA-V-L 42 usage_00268.pdb 1 --------DVIFPEKKVALNCEVRGN-PSPSYRWLRNGTEIALE-----SDY-RYS-L-- 42 L C g w usage_00021.pdb 47 DEGSLVFLRPQA----S-DEGHYQCFAETPAGVASS-------------- 77 usage_00103.pdb 48 PSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDA-SLEVAIL--- 93 usage_00127.pdb 46 KDGALFFYRTMQGKKEQ-DGGEYWCVAKNRVGQAVSRHA-SLQ------- 86 usage_00128.pdb 46 KDGALFFYRTMQGKKEQ-DGGEYWCVAKNRVGQAVSRHA-SLQIAVLRDD 93 usage_00129.pdb 46 KDGALFFYRTMQGKKEQ-DGGEYWCVAKNRVGQAVSRHA-SLQ------- 86 usage_00144.pdb 36 RQKTMSYQW--T-----NLRAPFKCKAVNRVSQESEMEVVNC-------- 70 usage_00172.pdb 43 ESGSLRIHNVQK----E-DAGQYRCVAKNSLGTAYSKLV-KLE------- 79 usage_00268.pdb 43 IDGTFIISNPSE----LRDSGLYQCLATNSFGSILSREA-TLQ------- 80 g d g y C A n g s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################