################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:23 2021 # Report_file: c_1128_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00084.pdb # 2: usage_00184.pdb # 3: usage_00185.pdb # 4: usage_00344.pdb # 5: usage_00345.pdb # 6: usage_00346.pdb # # Length: 81 # Identity: 39/ 81 ( 48.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 81 ( 65.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 -AFYKEEQDFFDEFSPVVQGYGTKYYNALIHSPFREELEAYYGKQLFALAECDLKTYSDE 59 usage_00184.pdb 1 --------------EPVVKGLVNDYYRALVSSPFRAELEQVWGKQLFALAETQLKTYAPV 46 usage_00185.pdb 1 DEFYKKEQDFFDETEPVVKGLVNDYYRALVSSPFRAELEQVWGKQLFALAETQLKTYAPV 60 usage_00344.pdb 1 -EFYKQEQDFFDEVEPIVKGLVNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKTYSPD 59 usage_00345.pdb 1 -EFYKQEQDFFDEVEPIVKGLVNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKTYSPD 59 usage_00346.pdb 1 -----------------VKGLVNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKTYSPD 43 VkGlvndYYrALvsSPFR LE wGKQLFALAE LKTY p usage_00084.pdb 60 VVKDLQLENKLSSQYTQLLAS 80 usage_00184.pdb 47 IVEDLQKENKLASEYTKLIAS 67 usage_00185.pdb 61 IVEDLQKENKLASEYTKLIAS 81 usage_00344.pdb 60 IVEDLQLENKLTSEYTKLVAS 80 usage_00345.pdb 60 IVEDLQLENKLTSEYTKLVAS 80 usage_00346.pdb 44 IVEDLQLENKLTSEYTKLVAS 64 iVeDLQ ENKL SeYTkL AS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################