################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:39 2021 # Report_file: c_0900_45.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00345.pdb # 2: usage_00346.pdb # 3: usage_00646.pdb # 4: usage_01006.pdb # 5: usage_01088.pdb # 6: usage_01090.pdb # 7: usage_01091.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 64 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 64 ( 54.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00345.pdb 1 ------------NRAEFTVNFA------DKKITGTLTADNRQEATFTIDGNIKDNGFEGT 42 usage_00346.pdb 1 ------------NRAEFTVNFA------DKKITGTLTADNRQEATFTIDGNIKDNGFEGT 42 usage_00646.pdb 1 ------------YRTEFDVNFS------DKKVNGKLFDKGGVNPVFTVDATINGNGFIGS 42 usage_01006.pdb 1 TVVVKGEVNANA-KSFNVDLLAGKSKDI-ALHLNPRLN-----IKAFVRNSFLQ------ 47 usage_01088.pdb 1 ------------YRSEFDVNFG------DKKVSGKLFDKGGIVPVFMINADIKGNGFTGT 42 usage_01090.pdb 1 ------------YRTEFDVNFS------DKKVNGKLFDKGGVNPVFTVDATINGNGFIGS 42 usage_01091.pdb 1 ------------YRTEFDVNFS------DKKVNGKLFDKGGVNPVFTVDATINGNGFIGS 42 r ef vnf kk g l f i usage_00345.pdb 43 AKT- 45 usage_00346.pdb 43 AKT- 45 usage_00646.pdb 43 AKTS 46 usage_01006.pdb ---- usage_01088.pdb 43 ANTT 46 usage_01090.pdb 43 AKT- 45 usage_01091.pdb 43 AKTS 46 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################