################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:21:29 2021 # Report_file: c_1484_13.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00870.pdb # 2: usage_00871.pdb # 3: usage_00872.pdb # 4: usage_01103.pdb # 5: usage_01104.pdb # 6: usage_01105.pdb # 7: usage_01106.pdb # 8: usage_01107.pdb # 9: usage_01108.pdb # 10: usage_01109.pdb # 11: usage_01110.pdb # 12: usage_01111.pdb # 13: usage_01112.pdb # 14: usage_01113.pdb # 15: usage_01114.pdb # 16: usage_01966.pdb # 17: usage_01967.pdb # 18: usage_01968.pdb # 19: usage_01969.pdb # 20: usage_04304.pdb # 21: usage_04305.pdb # 22: usage_04306.pdb # # Length: 122 # Identity: 49/122 ( 40.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/122 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 69/122 ( 56.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00870.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_00871.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_00872.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_01103.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01104.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01105.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01106.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01107.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01108.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01109.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01110.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01111.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 usage_01112.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_01113.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_01114.pdb 1 SRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 60 usage_01966.pdb 1 ------GIVQQQQQLLDVVKRQQELLRLTVWGTK-------------------------- 28 usage_01967.pdb 1 --------VQQQQQLLDVVKRQQELLRLTVWGTK-------------------------- 26 usage_01968.pdb 1 --------VQQQQQLLDVVKRQQELLRLTVWGTK-------------------------- 26 usage_01969.pdb 1 ----LAGIVQQQQQLLDLVTRQQELLRLTVWGIKNLQT---------------------- 34 usage_04304.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWG--- 56 usage_04305.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWG--- 56 usage_04306.pdb 1 -RTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAF 59 VQQQQQLLDvVkRQQELLRLTVWGtK usage_00870.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_00871.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_00872.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_01103.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01104.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01105.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01106.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01107.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01108.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01109.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01110.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01111.pdb 60 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 118 usage_01112.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_01113.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_01114.pdb 61 RQVAHTTVPWPNA-SLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 119 usage_01966.pdb 29 -------------------------QEWERKVDFLEENITALLEEAQIQQEKNMY----- 58 usage_01967.pdb 27 --------------------------EWERKVDFLEENITALLEEAQIQQEKNM------ 54 usage_01968.pdb 27 -------------------------QEWERKVDFLEENITALLEEAQIQQEKN------- 54 usage_01969.pdb 35 --------------------G--GWQEWKRKVDFLEENITALLEEAQIQQEKNMYEL--- 69 usage_04304.pdb 57 ----------------TPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQK- 99 usage_04305.pdb 57 -----TTV-PWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 110 usage_04306.pdb 60 RQ--VTTV-PWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL 116 EWeRKVDFLEENITALLEEAQIQQEKN usage_00870.pdb -- usage_00871.pdb -- usage_00872.pdb -- usage_01103.pdb -- usage_01104.pdb -- usage_01105.pdb -- usage_01106.pdb 119 N- 119 usage_01107.pdb 119 N- 119 usage_01108.pdb 119 N- 119 usage_01109.pdb 119 N- 119 usage_01110.pdb 119 N- 119 usage_01111.pdb 119 N- 119 usage_01112.pdb -- usage_01113.pdb -- usage_01114.pdb -- usage_01966.pdb -- usage_01967.pdb -- usage_01968.pdb -- usage_01969.pdb -- usage_04304.pdb -- usage_04305.pdb -- usage_04306.pdb 117 NS 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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