################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:46 2021 # Report_file: c_0640_11.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00021.pdb # 6: usage_00022.pdb # 7: usage_00035.pdb # 8: usage_00102.pdb # 9: usage_00124.pdb # # Length: 139 # Identity: 71/139 ( 51.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/139 ( 59.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/139 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 GNKRLDAVNRITSNASTIVANAARALFAEQPQLIQPGG-AYTNRRMAACLRDMEIILRYV 59 usage_00017.pdb 1 GNKRLDIVNRINSNASAIVSNSARALFAEQPQLIQPGG-AYTNRRMAACLRDMEIVLRYV 59 usage_00018.pdb 1 GNKRLDIVNRINSNASAIVSNSARALFAEQPQLIQPGG-AYTNRRMAACLRDMEIVLRYV 59 usage_00019.pdb 1 GNKRLDIVNRINSNASAIVSNSARALFAEQPQLIQPGG-AYTNRRMAACLRDMEIVLRYV 59 usage_00021.pdb 1 SNKRLDVVNRLTSNASSIVANAYRALVAERPQVFNPGGPCFHHRNQAACIRDLGFILRYV 60 usage_00022.pdb 1 -NKRLDVVNRLTSNASSIVANAYRALVAERPQVFNPGGPCFHHRNQAACIRDLGFILRYV 59 usage_00035.pdb 1 GNKRMDVVNRITSNSSKIVADAARSLFAEQPQLIAPGG-AYTSRRMAACLRDMEIILRYV 59 usage_00102.pdb 1 GNKRLDAVNRITSNASTIVANAARALFAEQPQLIQPGG-AYTNRRMAACLRDMEIILRYV 59 usage_00124.pdb 1 GNKRLDVVNKITNNASAIVTNAARALFAEQPQLISPGGNAYTSRRMAACLRDMEIVLRYV 60 NKRlD VNr sNaS IV n RaL AE PQ PGG R AAC RD LRYV usage_00002.pdb 60 TYAILAGDSSVLDDRCLNGLRETYQALGTPGSSVAVAIQKMKDAAIAIANDPNGITPGDC 119 usage_00017.pdb 60 SYAEIAGDSSVLDDRCLNGLRETYQALGTPGSSVAVAIEKMKEASVSDANDSSGTPSGDC 119 usage_00018.pdb 60 SYAEIAGDSSVLDDRCLNGLRETYQALGTPGSSVAVAIEKMKEASVSDANDSSGTPSGDC 119 usage_00019.pdb 60 SYAEIAGDSSVLDDRCLNGLRETYQALGTPGSSVAVAIEKMKEASVSDANDSSGTPSGDC 119 usage_00021.pdb 61 TYSVLAGDTSVMDDRCLNGLRETYQALGTPGDAVASGIKKMKEAALKIANDPNGITKGDC 120 usage_00022.pdb 60 TYSVLAGDTSVMDDRCLNGLRETYQALGTPGDAVASGIKKMKEAALKIANDPNGITKGDC 119 usage_00035.pdb 60 TYAIFSGDASVLDDRCLNGLRETYIALGTPGASVAVGVEKMKQAALAIAGDTSGITPGDC 119 usage_00102.pdb 60 TYAILAGDSSVLDDRCLNGLRETYQALGTPGSSVAVAIQKMKDAAIAIANDPNGITPGDC 119 usage_00124.pdb 61 SYAMIAGDASVLDDRCLNGLRETYQALGTPGASVAVAIQKMKDAALALVNDTTGTPAGDC 120 Y aGD SV DDRCLNGLRETYqALGTPG VA i KMK A anD G GDC usage_00002.pdb 120 SALMSEIAGYFDRAAAA-- 136 usage_00017.pdb 120 SSLSAELGTYFDRAASAVS 138 usage_00018.pdb 120 SSLSAELGTYFDRAASAVS 138 usage_00019.pdb 120 SSLSAELGTYFDRAASAVS 138 usage_00021.pdb 121 SQLMSELASYFDRAAAA-- 137 usage_00022.pdb 120 SQLMSELASYFDRAAAA-- 136 usage_00035.pdb 120 ASIMSEVASYFDRAAAAVA 138 usage_00102.pdb 120 SALMSEIAGYFDRAAAAVA 138 usage_00124.pdb 121 ASLVAEIATYFDRAAAAVA 139 l E YFDRAA A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################