################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:58 2021 # Report_file: c_0832_78.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00389.pdb # 2: usage_00403.pdb # 3: usage_00577.pdb # 4: usage_00578.pdb # 5: usage_00855.pdb # # Length: 78 # Identity: 9/ 78 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 78 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 78 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00389.pdb 1 ---HFFQ-GLSGLLKLDLSQNN-----L-HILRPQNLDNLPKSLKLLSLRDNYLSFFNWT 50 usage_00403.pdb 1 -NASALT-ELSDLEVLDLSYNSHYFRIAGVTHHLEFIQN-FTNLKVLNLSHNNIYTLTD- 56 usage_00577.pdb 1 P-NEAFLNLPASLTELHINDNM-----L-KFFNWTLLQQ-FPRLELLDLRGNKLLFLTDS 52 usage_00578.pdb 1 P-NEAFLNLPASLTELHINDNM-----L-KFFNWTLLQQ-FPRLELLDLRGNKLLFLTDS 52 usage_00855.pdb 1 L-PCTLGNLPKSLQLLRLRNNY-----L-AFFNWSSLTL-LPNLETLDLAGNQLKALSNG 52 L L N l l L L L N l l usage_00389.pdb 51 SLS----FL-PNLEVLDL 63 usage_00403.pdb 57 ---KYNLES-KSLVELVF 70 usage_00577.pdb 53 LSD----FT-SSLRTLLL 65 usage_00578.pdb 53 LSD----FT-SSLRTLLL 65 usage_00855.pdb 53 SLP----S-GTQLQRLDV 65 L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################