################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:41 2021 # Report_file: c_0545_33.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00223.pdb # 2: usage_00224.pdb # 3: usage_00225.pdb # 4: usage_00226.pdb # 5: usage_00441.pdb # 6: usage_00442.pdb # 7: usage_00443.pdb # 8: usage_00444.pdb # # Length: 137 # Identity: 109/137 ( 79.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 120/137 ( 87.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/137 ( 12.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 --HVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKE 58 usage_00224.pdb 1 -QHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKE 59 usage_00225.pdb 1 TQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKE 60 usage_00226.pdb 1 -QHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKE 59 usage_00441.pdb 1 TQHVYHKYRRRCLNERKRLGIGQSQE-NTLFRFWSFFLRDHFNKK-YEEFKQLALEDAKE 58 usage_00442.pdb 1 -QHVYHKYRRRCLNERKRLGIGQSQE-NTLFRFWSFFLRDHFNKK-YEEFKQLALEDAKE 57 usage_00443.pdb 1 TQHVYHKYRRRCLNERKRLGIGQSQE-NTLFRFWSFFLRDHFNKK-YEEFKQLALEDAKE 58 usage_00444.pdb 1 TQHVYHKYRRRCLNERKRLGIGQSQE-NTLFRFWSFFLRDHFNKK-YEEFKQLALEDAKE 58 HVYHKYRRRCLNERKRLGIGQSQE NTLFRFWSFFLRDHFNKK YEEFKQLALEDAKE usage_00223.pdb 59 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNL 118 usage_00224.pdb 60 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNL 119 usage_00225.pdb 61 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNL 120 usage_00226.pdb 60 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKANLD 119 usage_00441.pdb 59 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNL 118 usage_00442.pdb 58 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYS----L 113 usage_00443.pdb 59 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNL 118 usage_00444.pdb 59 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLK-Y----- 112 GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLK s usage_00223.pdb 119 DIDPKLQEYLGKF---- 131 usage_00224.pdb 120 DIDPKLQEYLGKFRRLE 136 usage_00225.pdb 121 DIDPKLQEYLGKF---- 133 usage_00226.pdb 120 IDPKLQEYLGKFRR--- 133 usage_00441.pdb 119 DIDPKLQEYLG------ 129 usage_00442.pdb 114 DIDPKLQEYLGKF---- 126 usage_00443.pdb 119 DIDPKLQEYLG------ 129 usage_00444.pdb 113 DIDPKLQEYL------- 122 didpklqeyl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################