################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:30:44 2021 # Report_file: c_0104_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00036.pdb # 10: usage_00081.pdb # 11: usage_00082.pdb # # Length: 218 # Identity: 75/218 ( 34.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 181/218 ( 83.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/218 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00003.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00004.pdb 1 --SDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 57 usage_00005.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00009.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00010.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00011.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00012.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00036.pdb 1 -KQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENR 59 usage_00081.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 usage_00082.pdb 1 DLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHS-YLPLQFLNPYYNKRTDKYGGSLENR 59 sDIaqvqqfyvdAakRSrdAGfDIVYVYGAHs ylplqFLnpyYNkRTDkYGGSLENR usage_00002.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00003.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00004.pdb 58 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 117 usage_00005.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00009.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00010.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00011.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00012.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00036.pdb 60 MRLLRELLEDTLDECAGRAAVACRITVEEEIDG-GIT-REDIEGVLRELGELPDLWDFAM 117 usage_00081.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 usage_00082.pdb 60 ARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITI 119 aRfwlEtLEkvkhavgsdcAiAtRfgVdtvygp qIe evDgqkfvemadsLvDmWDiti usage_00002.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00003.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00004.pdb 118 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 177 usage_00005.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00009.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00010.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00011.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00012.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00036.pdb 118 G---SWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLI 174 usage_00081.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 usage_00082.pdb 120 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADII 179 G eWgeDagpSRFyqqGhtipwVklvKqvskKPVlGVGRyTdPekMieivtkGyaDiI usage_00002.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00003.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00004.pdb 178 GCARPSIAD----------------------------- 186 usage_00005.pdb 180 GCARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWE 217 usage_00009.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00010.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00011.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00012.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 usage_00036.pdb 175 GAARPSIADPFLPNKIRDG------------------- 193 usage_00081.pdb 180 GCARPSIADPFLPQKVEQ-------------------- 197 usage_00082.pdb 180 GCARPSIADPFLPQKVEQG------------------- 198 GcARPSIAD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################