################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:32 2021 # Report_file: c_1125_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00041.pdb # 2: usage_00130.pdb # 3: usage_00197.pdb # 4: usage_00313.pdb # 5: usage_00314.pdb # 6: usage_00553.pdb # 7: usage_00554.pdb # 8: usage_00555.pdb # 9: usage_00556.pdb # 10: usage_00557.pdb # 11: usage_00558.pdb # 12: usage_00607.pdb # 13: usage_00695.pdb # # Length: 79 # Identity: 4/ 79 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 79 ( 20.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 79 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 KPQELLSLIIERFEI---PEP------RF-RKEYIQPVQLRVLNVCRHWVEHHFYDFERD 50 usage_00130.pdb 1 YLPELIPHLIQCLSD---K--------------KALVRSITCWTLSRYAH----WVVSQP 39 usage_00197.pdb 1 -SAELLQKVITLYKDALA--------------KNSPGLCLKICYFVRYWITEFWVMFKMD 45 usage_00313.pdb 1 KPQELLSLIIERFEI---PEP------RF-RKEYIQPVQLRVLNVCRHWVEHHFYDFERD 50 usage_00314.pdb 1 KPQELLSLIIERFEI---PEP------RF-RKEYIQPVQLRVLNVCRHWVEHHFYDFERD 50 usage_00553.pdb 1 KPQELLSLIIERFEI---PEP-LSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 56 usage_00554.pdb 1 KPQELLSLIIERFEI---PEP-LSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 56 usage_00555.pdb 1 KPQELLSLIIERFEI---PEPELSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 57 usage_00556.pdb 1 KPQELLSLIIERFEI---P------ELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 51 usage_00557.pdb 1 KPQELLSLIIERFEI---PEPELSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 57 usage_00558.pdb 1 KPQELLSLIIERFEI---PEPELSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 57 usage_00607.pdb 1 KPQELLSLIIERFEI---PEP----ELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 53 usage_00695.pdb 1 KPQELLSLIIERFEI---PEP-LSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERD 56 ELl I l R w f d usage_00041.pdb 51 AY-LLQRMEEFIGT----- 63 usage_00130.pdb 40 PDTYLKPLMTELLKRI--- 55 usage_00197.pdb 46 AS-LTDTMEEFQELVKAKG 63 usage_00313.pdb 51 AY-LLQRMEEFIGT----- 63 usage_00314.pdb 51 AY-LLQRMEEFIGT----- 63 usage_00553.pdb 57 AY-LLQRMEEFIGTV---- 70 usage_00554.pdb 57 AY-LLQRMEEFIGTV---- 70 usage_00555.pdb 58 AY-LLQRMEEFIGTV---- 71 usage_00556.pdb 52 AY-LLQRMEEFIGTV---- 65 usage_00557.pdb 58 AY-LLQRMEEFIGTV---- 71 usage_00558.pdb 58 AY-LLQRMEEFIGTV---- 71 usage_00607.pdb 54 AY-LLQRMEEFIGTV---- 67 usage_00695.pdb 57 AY-LLQRMEEFIGTV---- 70 a ll meef #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################