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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:35 2021
# Report_file: c_1261_81.html
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#====================================
# Aligned_structures: 8
#   1: usage_00193.pdb
#   2: usage_00641.pdb
#   3: usage_01146.pdb
#   4: usage_03006.pdb
#   5: usage_03040.pdb
#   6: usage_03041.pdb
#   7: usage_03042.pdb
#   8: usage_03824.pdb
#
# Length:         63
# Identity:        5/ 63 (  7.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/ 63 ( 17.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 63 ( 22.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00193.pdb         1  --GRIINITSIVGV--TGN--PGQANYCASKAGLIGFSKSLAQE-----IASRNVTVNCI   49
usage_00641.pdb         1  --GLLTLAGAKAAL--DGT--PGMIGYGMAKGAVHQLCQSLAGKNSGMP---SGAAAIAV   51
usage_01146.pdb         1  -WGRVLFIGSVTTF--TAGGPVPIPAYTTAKTALLGLTRALAKE-----WARLGIRVNLL   52
usage_03006.pdb         1  RGGSILNIASMYST--FGS--ADRPAYSASKGAIVQLTRSLACE-----YAAERIRVNAI   51
usage_03040.pdb         1  --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV   49
usage_03041.pdb         1  --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV   49
usage_03042.pdb         1  --GSVVNISSFGGQ--LSF--AGFSAYSATKAALEQLSEGLADE-----VAPFGIKVLIV   49
usage_03824.pdb         1  --PTIVNISSILHSGKMKV--PGTSVYSASKAALSRFTEVLAAE-----MEPRNIRCFTI   51
                             g    i s                Y   K a       LA e                

usage_00193.pdb        50  APG   52
usage_00641.pdb        52  LPV   54
usage_01146.pdb        53  CPG   55
usage_03006.pdb        52  APG   54
usage_03040.pdb        50  EPG   52
usage_03041.pdb        50  EPG   52
usage_03042.pdb        50  EPG   52
usage_03824.pdb        52  SPG   54
                            Pg


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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