################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:41 2021 # Report_file: c_1222_123.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00056.pdb # 2: usage_00057.pdb # 3: usage_00244.pdb # 4: usage_01296.pdb # 5: usage_01297.pdb # 6: usage_01602.pdb # 7: usage_02131.pdb # 8: usage_02132.pdb # # Length: 25 # Identity: 5/ 25 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 25 ( 36.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 25 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 PVL-EVDGKQLAQSLAICRYLARQF 24 usage_00057.pdb 1 PVL-EVDGKQLAQSLAICRYLARQF 24 usage_00244.pdb 1 PIL-QIGDLILAQSQAIVRYLSKKY 24 usage_01296.pdb 1 PVL-EVDGKQLAQSLAICRYLARQF 24 usage_01297.pdb 1 PVL-EVDGKQLAQSLAICRYLARQF 24 usage_01602.pdb 1 PVL-EIDGKQTHQSVAISRYLGKQF 24 usage_02131.pdb 1 PCLQLDDGRTLTEGPAIVQYVADQV 25 usage_02132.pdb 1 PCLQLDDGRTLTEGPAIVQYVADQV 25 P L dg l AI Y q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################