################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:59 2021 # Report_file: c_1052_45.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00174.pdb # 2: usage_00237.pdb # 3: usage_00238.pdb # 4: usage_00239.pdb # 5: usage_00295.pdb # 6: usage_00296.pdb # 7: usage_00339.pdb # 8: usage_00341.pdb # 9: usage_00342.pdb # 10: usage_00361.pdb # 11: usage_00543.pdb # # Length: 83 # Identity: 73/ 83 ( 88.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 83 ( 90.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 83 ( 8.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 --ETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADAL-- 56 usage_00237.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKIAPVGTFDDISKNTVRGILHITADDLGP 60 usage_00238.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKIAPVGTFDDISKNTVRGILHITADDLGP 60 usage_00239.pdb 1 --ETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDAISKNTVRGILHITADDLGP 58 usage_00295.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 60 usage_00296.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 60 usage_00339.pdb 1 --ETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 58 usage_00341.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 60 usage_00342.pdb 1 --ETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 58 usage_00361.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 60 usage_00543.pdb 1 SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP 60 ETLMGTAMATPHVSGVVALIQAAYYQKYGKI PVGTFDdISKNTVRGILHITADdL usage_00174.pdb 57 -GWDADYGYGVVRAALAVQAA-- 76 usage_00237.pdb 61 TGWDADYGYGVVRAALAVQAALG 83 usage_00238.pdb 61 TGWDADYGYGVVRAALAVQAALG 83 usage_00239.pdb 59 TGWDADYGYGVVRAALAVQAAL- 80 usage_00295.pdb 61 TGWDADYGYGVVRAALAVQAAL- 82 usage_00296.pdb 61 TGWDADYGYGVVRAALAVQAA-- 81 usage_00339.pdb 59 TGWDADYGYGVVRAALAVQAA-- 79 usage_00341.pdb 61 TGWDADYGYGVVRAALAVQAAL- 82 usage_00342.pdb 59 TGWDADYGYGVVRAALAVQAA-- 79 usage_00361.pdb 61 TGWDADYGYGVVRAALAVQAA-- 81 usage_00543.pdb 61 TGWDADYGYGVVRAALAVQAAL- 82 GWDADYGYGVVRAALAVQAA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################