################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:10 2021 # Report_file: c_0235_8.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00066.pdb # # Length: 139 # Identity: 37/139 ( 26.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 126/139 ( 90.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/139 ( 9.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV 60 usage_00017.pdb 1 -VVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV 59 usage_00066.pdb 1 AVIEIGSSPGGWTQVLNSLA---RKIISIDLQE-EEIAGVRFIRCDIFKETIFDDIDRAL 56 VvdlGaaPGGWsQyvvtqi grIIacDLlp dpIvGVdFlqgDfrdElvmkallerv usage_00016.pdb 61 GD---SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 117 usage_00017.pdb 60 GD---SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 116 usage_00066.pdb 57 REEGIEKVDDVVSDA-AKVSGIPSRDHAVSYQIGQRV-EIAVRYLRNGGNVLLKQFQGD- 113 gd sKVqvVmSDm pnmSGtPavDipramylvela EmcrdvLapGGsfvvKvFQGe usage_00016.pdb 118 FDEYLREIRSLFTKVKV-- 134 usage_00017.pdb 117 FDEYLREIRSLFTKVKV-- 133 usage_00066.pdb 114 TNDFIAIWRKNFSSYKISK 132 fdeylreiRslFtkvKv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################