################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Fri Jan 22 10:40:35 2021 # Report_file: c_1203_109.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00004.pdb # 2: usage_00336.pdb # 3: usage_00611.pdb # 4: usage_00911.pdb # 5: usage_01372.pdb # 6: usage_01494.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 61 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 61 ( 85.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -------P-----------IVDAT------LPDGSRLQATFGTEVTP--RGSSFTI---- 30 usage_00336.pdb 1 ----RKVLTLEKGDNQTFGFEIQT------Y--GVTFVAR-------------------- 28 usage_00611.pdb 1 QTH-LEGD-----------TVQIICNTGYRLQNNENN-----IS---------------- 27 usage_00911.pdb 1 LHASLSEY-----------VLLFG------TALGSRGHSGR------------------- 24 usage_01372.pdb 1 -------P-----------IVDAT------LPDGSRLQATFGTEVTP--RGSSFTI---- 30 usage_01494.pdb 1 -----V-------------SDTIP------AG--PELIVSEG-Q---AVTAGDALTNNPN 30 usage_00004.pdb 31 R 31 usage_00336.pdb - usage_00611.pdb - usage_00911.pdb 25 Y 25 usage_01372.pdb 31 R 31 usage_01494.pdb 31 V 31 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################