################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:32 2021 # Report_file: c_1459_54.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00059.pdb # 2: usage_00928.pdb # 3: usage_02052.pdb # 4: usage_02053.pdb # 5: usage_02072.pdb # 6: usage_02073.pdb # 7: usage_02079.pdb # 8: usage_02080.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 39 ( 23.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 39 ( 35.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 -A-VIKAG-AA----TEVELKERKHRIEDAVRNAKAAVE 32 usage_00928.pdb 1 L----FEREGTNCENLPETHAFLKRVRKVVDDEFP---- 31 usage_02052.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLED 34 usage_02053.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLE- 33 usage_02072.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLED 34 usage_02073.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLE- 33 usage_02079.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLED 34 usage_02080.pdb 1 -VIAFLPPLAS----TAEELSEMVAIMKQAIHEVTSLE- 33 a t eel e k a e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################