################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:39 2021 # Report_file: c_1434_92.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00963.pdb # 2: usage_01027.pdb # 3: usage_01218.pdb # 4: usage_01220.pdb # 5: usage_01221.pdb # 6: usage_01241.pdb # 7: usage_01242.pdb # # Length: 89 # Identity: 15/ 89 ( 16.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 89 ( 69.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 89 ( 30.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00963.pdb 1 NISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYE 60 usage_01027.pdb 1 -------------------YQRFSDYFYPQVFAG---APA----DKAKNEKVQEALQLLD 34 usage_01218.pdb 1 -ISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYE 59 usage_01220.pdb 1 -ISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYE 59 usage_01221.pdb 1 -ISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYE 59 usage_01241.pdb 1 -ISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYE 59 usage_01242.pdb 1 -ISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIY-LTTDEAVVAEEEAKLAKVLDVYE 58 dpvaSklafeQiFks ltt vaeeeaKlakvLdvye usage_00963.pdb 61 ARLKEFKYLAGETFTLTDLHHIPAIQYL- 88 usage_01027.pdb 35 KFLEGQKYVAGPNLTVADLSLIASVSSLE 63 usage_01218.pdb 60 ARLKEFKYLAGETFTLTDLHHIPAIQYLL 88 usage_01220.pdb 60 ARLKEFKYLAGETFTLTDLHHIPAIQYL- 87 usage_01221.pdb 60 ARLKEFKYLAGETFTLTDLHHIPAIQYL- 87 usage_01241.pdb 60 ARLKEFKYLAGETFTLTDLHHIPAIQYLL 88 usage_01242.pdb 59 ARLKEFKYLAGETFTLTDLHHIPAIQYLL 87 arLkefKYlAGetfTltDLhhIpaiqyL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################