################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:51 2021 # Report_file: c_0490_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00089.pdb # 4: usage_00090.pdb # 5: usage_00091.pdb # 6: usage_00127.pdb # # Length: 81 # Identity: 68/ 81 ( 84.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 81 ( 85.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 81 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 SGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTG-----K-SKVTHVMIRCQELKYD 54 usage_00006.pdb 1 SGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTG--------KVTHVMIRCQELKYD 52 usage_00089.pdb 1 SGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTG-----D-SKVTHVMIRCQELKYD 54 usage_00090.pdb 1 SGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGD--DGK-SKVTHVMIRCQELKYD 57 usage_00091.pdb 1 ---EAEKLLTEKGKHGSFLVRDSQSHPGDFVLSVRTG-----D-SKVTHVMIRCQELKYD 51 usage_00127.pdb 1 SGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKD-GKSKVTHVMIRCQELKYD 59 EAEKLLTEKGKHGSFLVReSQSHPGDFVLSVRTG KVTHVMIRCQELKYD usage_00005.pdb 55 VGGGERFDSLTDLVEHYKKNP 75 usage_00006.pdb 53 VGGGERFDSLTDLVEHYKKN- 72 usage_00089.pdb 55 VGGGERFDSLTDLVEHYKKNP 75 usage_00090.pdb 58 VGGGERFDSLTDLVEHYKKNP 78 usage_00091.pdb 52 VGGGERFDSLTDLVEHYKKNP 72 usage_00127.pdb 60 VGGGERFDSLTDLVEHYKKN- 79 VGGGERFDSLTDLVEHYKKN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################