################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:29 2021 # Report_file: c_0490_14.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00031.pdb # 5: usage_00054.pdb # 6: usage_00094.pdb # 7: usage_00125.pdb # 8: usage_00145.pdb # # Length: 79 # Identity: 11/ 79 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 79 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 79 ( 29.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD----GKLYV-- 54 usage_00021.pdb 1 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD----GKLYV-- 54 usage_00022.pdb 1 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD----GKLYV-- 54 usage_00031.pdb 1 SREDAENLLESQPLGSFLIRVSHSH-VGYTLSYKAQSSCCHFMVKLLDD----GTFMIPG 55 usage_00054.pdb 1 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD----GKLYV-- 54 usage_00094.pdb 1 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD----GKLYV-- 54 usage_00125.pdb 1 NRNKAENLLRGKRDGTFLVRESSKQG-CYACSVVVDGEVKHCVINKTATGYGF----A-- 53 usage_00145.pdb 1 --------LSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTAD----GKVYV-- 46 L s GsFLvReS s S g v H in d usage_00020.pdb 55 SSESRFNTLAELVHHHSTV 73 usage_00021.pdb 55 SSESRFNTLAELVHHHSTV 73 usage_00022.pdb 55 SSESRFNTLAELVHHHSTV 73 usage_00031.pdb 56 -EKVAHTSLDALVTFHQ-- 71 usage_00054.pdb 55 SSESRFNTLAELVHHHS-- 71 usage_00094.pdb 55 SSESRFNTLAELVHHHSTV 73 usage_00125.pdb 54 EPYNLYSSLKELVLHYQHT 72 usage_00145.pdb 47 TAESRFSTLAELVHHHS-- 63 L eLV hh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################