################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:36 2021 # Report_file: c_0252_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00013.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00023.pdb # 5: usage_00027.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # # Length: 156 # Identity: 26/156 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/156 ( 68.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/156 ( 14.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 -----AQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAW 55 usage_00019.pdb 1 ----YAQLRRKCELFTYMRFDAEFTFVVAKPNGELVPQLLQYMYVPPGAPKPTSRDSFAW 56 usage_00020.pdb 1 ----YAQLRRKCELFTYMRFDAEFTFVVAKPNGELVPQLLQYMYVPPGAPKPTSRDSFAW 56 usage_00023.pdb 1 DITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAW 60 usage_00027.pdb 1 -------MRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAW 53 usage_00029.pdb 1 -----AQLRRKCELFTYMRFDAEFTFVVAKPNGELVPQLLQYMYVPPGAPKPTSRDSFAW 55 usage_00030.pdb 1 ------GIAAMLSCFTYIAADLRITLRFSNP--NDNPATMLVAFAPPGATIPLKPT-RQM 51 rrk elFTYmrfDaefTfv P e vPqllqym vPPGApkP sr aw usage_00013.pdb 56 QTATNPSVFVKL-SD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGAMPNN 112 usage_00019.pdb 57 QTATNPSVFVKM-TD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNN 113 usage_00020.pdb 57 QTATNPSVFVKM-TD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNN 113 usage_00023.pdb 61 QTATNPSVFVKL-SD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNN 117 usage_00027.pdb 54 QTATNPSVFVKL-SD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNN 110 usage_00029.pdb 56 QTATNPSVFVKM-TD-P-PAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNN 112 usage_00030.pdb 52 -LSNFYMAEVPVSAATSTMVSFSIPYTSPLSAIPTSYFGWEDWS------GTNFGQLSSG 104 tatnpsvfVk d p paqvSvPfmSPaSAyqwfYdGyptfg dl yG pnn usage_00013.pdb 113 MMGTFSVRTVGTSKS--KYPLVVRIYMRMKHVRAWI 146 usage_00019.pdb 114 MMGTFSIRTVGIEKS--PHSITLRVYMRIKHVRAWI 147 usage_00020.pdb 114 MMGTFSIRTVGIEKS--PHSITLRVYMRIKHVRAWI 147 usage_00023.pdb 118 MMGTFSVRTVGTSKS--KYPLVVRIYMRMKHVRAW- 150 usage_00027.pdb 111 MMGTFSVRTVGTSKS--KYPLVVRIYMRMKHVRAWI 144 usage_00029.pdb 113 MMGTFSIRTVGTEKS--PHSITLRVYMRIKHVRAWI 146 usage_00030.pdb 105 SWGNLMLIPSLSVDSAIPFDFQLSCWVAFGNFKAWV 140 mmGtfs rtvg kS r ymr khvrAW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################