################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:57 2021 # Report_file: c_0110_16.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00020.pdb # 4: usage_00076.pdb # 5: usage_00077.pdb # 6: usage_00083.pdb # 7: usage_00170.pdb # # Length: 267 # Identity: 67/267 ( 25.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/267 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/267 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ------------------------------IPALAGK-V----LRFQKAFLTQLDELLTE 25 usage_00004.pdb 1 ------------------------------IPALAGK-V----LRFQKAFLTQLDELLTE 25 usage_00020.pdb 1 -----------------------------SSVMKHLPGPQQQAFKELQGLEDFIAKKVEH 31 usage_00076.pdb 1 --KFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKE 58 usage_00077.pdb 1 DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKE 60 usage_00083.pdb 1 DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKE 60 usage_00170.pdb 1 -------------------SFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEK 41 usage_00003.pdb 26 HRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWG 85 usage_00004.pdb 26 HRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWG 85 usage_00020.pdb 32 NQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYG 90 usage_00076.pdb 59 HHQSLD-PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYG 117 usage_00077.pdb 61 HHQSLD-PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYG 119 usage_00083.pdb 61 HHQSLD-PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYG 119 usage_00170.pdb 42 HRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 100 h D PRD L Mek k v LF AG TtSTTL G usage_00003.pdb 86 LLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHM 145 usage_00004.pdb 86 LLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHM 145 usage_00020.pdb 91 FLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHR 150 usage_00076.pdb 118 LLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHE 177 usage_00077.pdb 120 LLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHE 179 usage_00083.pdb 120 LLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHE 179 usage_00170.pdb 101 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 160 L P EId VIG R P D MPY AV HE QRf P H usage_00003.pdb 146 TSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFS 205 usage_00004.pdb 146 TSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFS 205 usage_00020.pdb 151 VNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFS 210 usage_00076.pdb 178 ATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFS 237 usage_00077.pdb 180 ATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFS 239 usage_00083.pdb 180 ATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFS 239 usage_00170.pdb 161 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFS 220 D g iPKgT L SvL D P F P HFL G f F PFS usage_00003.pdb 206 AGRRACLGEPLARMELFLFFTSLLQH- 231 usage_00004.pdb 206 AGRRACLGEPLARMELFLFFTSLLQH- 231 usage_00020.pdb 211 IGKRYCFGEGLARMELFLFFTTIMQN- 236 usage_00076.pdb 238 TGKRVCAGEGLARMELFLLLCAILQHF 264 usage_00077.pdb 240 TGKRVCAGEGLARMELFLLLCAILQ-- 264 usage_00083.pdb 240 TGKRVCAGEGLARMELFLLLCAIL--- 263 usage_00170.pdb 221 LGKRICLGEGIARTELFLFFTTILQNF 247 G R C GE lARmELFL l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################