################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:15 2021 # Report_file: c_1365_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00138.pdb # 2: usage_00214.pdb # 3: usage_00361.pdb # 4: usage_00510.pdb # 5: usage_00559.pdb # 6: usage_00560.pdb # 7: usage_00561.pdb # # Length: 45 # Identity: 2/ 45 ( 4.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 45 ( 55.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 45 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 ----TRNEMLDIVDAIYQMVGNTVELPEE-ENTPEKRVDRIFAMM 40 usage_00214.pdb 1 TREQMLTNRFNDLLDRMD-IMFGSTGSADIE-EWMAGVAWLHCLL 43 usage_00361.pdb 1 TREQMLTNRFNDLLDRMD-IMFGSTGSADIE-EWMAGVAWLHCLL 43 usage_00510.pdb 1 -REEMLVERFNFLLDKMD-LIFGAHGNAVLE-QYMAGVAWIHCLL 42 usage_00559.pdb 1 -REQMLTNRFNDLLDRMD-IMFGSTGSADIE-EWMAGVAWLHCLL 42 usage_00560.pdb 1 -REQMLTNRFNDLLDRMD-IMFGSTGSADIE-EWMAGVAWLHCLL 42 usage_00561.pdb 1 TREQMLTNRFNDLLDRMD-IMFGSTGSADIE-EWMAGVAWLHCLL 43 ml rfn lld md fg g a E magVaw hcll #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################