################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:26 2021 # Report_file: c_1489_26.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_01248.pdb # 2: usage_01451.pdb # 3: usage_01453.pdb # 4: usage_02443.pdb # 5: usage_02586.pdb # 6: usage_03929.pdb # # Length: 63 # Identity: 5/ 63 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 63 ( 31.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 63 ( 68.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01248.pdb 1 --EQMLTNRFNDLLD------------------RMDIMFGSTGSA--DIEEWMAGVAWLH 38 usage_01451.pdb 1 TREQMLTNRFNDLLD------------------RMDIMFGSTGSA--DIEEWMAGVAWLH 40 usage_01453.pdb 1 TREQMLTNRFNDLLD------------------RMDIMFGSTGSA--DIEEWMAGVAWLH 40 usage_02443.pdb 1 ---------------TDVGLFSTLYGGATGQMGPMWGSLT-----LDEMLRTMAWVRHLY 40 usage_02586.pdb 1 -REQMLTNRFNDLLD------------------RMDIMFGSTGSA--DIEEWMAGVAWLH 39 usage_03929.pdb 1 -REQMLTNRFNDLLD------------------RMDIMFGSTGSA--DIEEWMAGVAWLH 39 rMdimfg dieewMAgVawLh usage_01248.pdb 39 CLL 41 usage_01451.pdb 41 CLL 43 usage_01453.pdb 41 CLL 43 usage_02443.pdb --- usage_02586.pdb 40 CLL 42 usage_03929.pdb 40 CLL 42 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################