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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:12:13 2021
# Report_file: c_0610_4.html
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#====================================
# Aligned_structures: 5
#   1: usage_00188.pdb
#   2: usage_00249.pdb
#   3: usage_00250.pdb
#   4: usage_00312.pdb
#   5: usage_00313.pdb
#
# Length:        101
# Identity:       35/101 ( 34.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     89/101 ( 88.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           12/101 ( 11.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00188.pdb         1  --NRAATFPLQVLGFEVDAVNSVQFSNHTGYSHWKGQVL--NSDELQELYDGLKLNHVNQ   56
usage_00249.pdb         1  --NSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGC--VMPPSHLTEIVQGIAAIDKLH   56
usage_00250.pdb         1  AGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGC--VMPPSHLTEIVQGIAAIDKLH   58
usage_00312.pdb         1  -GNSAAEFP-RRLGANVWPLNTVQFSNHTQYGKWTG---V-PPSHLTEIVQGIAAIDKLH   54
usage_00313.pdb         1  --NSAAEFP-RRLGANVWPLNTVQFSNHTQYGKWTG---V-PPSHLTEIVQGIAAIDKLH   53
                             NsAAeFP rrLGanVwplNtVQFSNHTqYgkWtG     ppshLtEivqGiaaidklh

usage_00188.pdb        57  -YDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVM   96
usage_00249.pdb        57  TCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVM   97
usage_00250.pdb        59  TCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVM   99
usage_00312.pdb        55  TCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVG   95
usage_00313.pdb        54  TCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCD---   91
                            cDaVLsGYlgsaeqgehilgIVrqvKaaNPqakYfCD   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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