################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:45 2021 # Report_file: c_1153_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00069.pdb # 2: usage_00070.pdb # 3: usage_00541.pdb # 4: usage_00615.pdb # 5: usage_00631.pdb # 6: usage_00635.pdb # 7: usage_00878.pdb # 8: usage_01886.pdb # 9: usage_02103.pdb # 10: usage_02328.pdb # 11: usage_02538.pdb # # Length: 65 # Identity: 1/ 65 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 65 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 65 ( 75.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 GLIHRDVKPD-NMLL-----DK------HGHLKLADFG-TCMKMDETGMVHC-----D-- 40 usage_00070.pdb 1 GLIHRDVKPD-NMLL-----DK------HGHLKLADFG-TCMKMDETGMVHC-------- 39 usage_00541.pdb 1 GFIHRDVKPD-NMLL-----DK------SGHLKLADFG-TCMKMNKEGMVRC-----D-- 40 usage_00615.pdb 1 GYRERSD-----CSNRPACG---------------T-S-DCCRVSVFGNCLTTLPVS--- 35 usage_00631.pdb 1 GFIHRDVKPD-NMLL-----DK------SGHLKLADFG-TCMKMNKEGMVRC-----D-- 40 usage_00635.pdb 1 GLIHRDVKPD-NMLL-----DK------HGHLKLADFG-TCMKMDETGMVHC-----D-- 40 usage_00878.pdb 1 GLIHRDVKPD-NMLL-----DK------HGHLKLADFG-TCMKMDETGMVHC-----D-- 40 usage_01886.pdb 1 GFIHRDVKPD-NMLL-----DK------SGHLKLADFG-TCMKMNKEGMVRC-----D-- 40 usage_02103.pdb 1 GFIHRDVKPD-NMLL-----DK------SGHLKLADFG-TCMKMNKEGMVRC-----D-- 40 usage_02328.pdb 1 GFIHRDVKPD-NMLL-----DK------SGHLKLADFG-TCMKMNKEGMVRC-----D-- 40 usage_02538.pdb 1 ----------VLVII-----DVKPKDLGL-PTEAYI--SVEEVHDD-GTPTS------KT 35 c G usage_00069.pdb ----- usage_00070.pdb ----- usage_00541.pdb ----- usage_00615.pdb ----- usage_00631.pdb ----- usage_00635.pdb ----- usage_00878.pdb ----- usage_01886.pdb ----- usage_02103.pdb ----- usage_02328.pdb ----- usage_02538.pdb 36 FEHVT 40 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################