################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:11 2021 # Report_file: c_1481_121.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00507.pdb # 2: usage_00525.pdb # 3: usage_01381.pdb # 4: usage_01386.pdb # 5: usage_01589.pdb # 6: usage_02546.pdb # 7: usage_02547.pdb # 8: usage_02548.pdb # 9: usage_02668.pdb # 10: usage_02669.pdb # 11: usage_02670.pdb # 12: usage_02804.pdb # 13: usage_02805.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 46 ( 2.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 46 ( 58.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00507.pdb 1 SQHERLGTLVREGYYDDAVLAR-YD----RAFVLRLFEHA---HA- 37 usage_00525.pdb 1 -----NA--------HDRILKT-IKTH---KLKNYIKESVNFLNSG 29 usage_01381.pdb 1 ALYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 35 usage_01386.pdb 1 --YDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 33 usage_01589.pdb 1 PEDVFEV--------IEEGKSNRHI-AVT-N-MNEHSSR------- 28 usage_02546.pdb 1 ALYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 35 usage_02547.pdb 1 ALYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 35 usage_02548.pdb 1 ALYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 35 usage_02668.pdb 1 -LYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 34 usage_02669.pdb 1 -LYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 34 usage_02670.pdb 1 --YDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 33 usage_02804.pdb 1 -LYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 34 usage_02805.pdb 1 -LYDHVVKMVEMGKYDNHLLED-YT----EEEFKQMDTFI------ 34 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################