################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:33 2021 # Report_file: c_0219_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00006.pdb # 2: usage_00025.pdb # 3: usage_00026.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00035.pdb # 7: usage_00036.pdb # 8: usage_00058.pdb # 9: usage_00059.pdb # # Length: 128 # Identity: 94/128 ( 73.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/128 ( 74.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/128 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 IAKFQGEDTVVI-ASKPYAFDRVFQSSTSQEQVYNDAAKKIVKDVLEGYNGTIFAYGQTS 59 usage_00025.pdb 1 IAKFQGEDTVVI-ASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTS 59 usage_00026.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00027.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00028.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00035.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00036.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00058.pdb 1 IPKFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 60 usage_00059.pdb 1 --KFKGEETVVIGQGKPYVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTS 58 KF GE TVVI KPY FDRV T QEQVYN cAK IVKDVLEGYNGTIFAYGQTS usage_00006.pdb 60 SGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDV 119 usage_00025.pdb 60 SGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLL-- 117 usage_00026.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00027.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00028.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00035.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00036.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00058.pdb 61 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 116 usage_00059.pdb 59 SGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRD---- 114 SGKTHTMEGKLHDP MGIIPRI DIF IYSMDENLEFHIKVSYFEIYLDKIRD usage_00006.pdb 120 SKTNLSVH 127 usage_00025.pdb -------- usage_00026.pdb -------- usage_00027.pdb -------- usage_00028.pdb -------- usage_00035.pdb -------- usage_00036.pdb -------- usage_00058.pdb -------- usage_00059.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################