################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:37 2021 # Report_file: c_1180_107.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00415.pdb # 2: usage_00523.pdb # 3: usage_00524.pdb # 4: usage_00525.pdb # 5: usage_00675.pdb # 6: usage_00876.pdb # 7: usage_01027.pdb # 8: usage_01072.pdb # 9: usage_01211.pdb # 10: usage_01258.pdb # 11: usage_01274.pdb # 12: usage_01368.pdb # 13: usage_01421.pdb # 14: usage_01422.pdb # 15: usage_01423.pdb # 16: usage_01448.pdb # 17: usage_01694.pdb # # Length: 57 # Identity: 1/ 57 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 57 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 57 ( 63.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00415.pdb 1 -GVLVVGYGD----LN---------G---KEYWLVKNSWGHNFGEE-GYIRMA---- 35 usage_00523.pdb 1 HAVVAIGYGS----EN---------D---VDYWLVRNSWGTNWGER-GYIKLQ---- 36 usage_00524.pdb 1 HAVVAIGYGS----EN---------D---VDYWLVRNSWGTNWGER-GYIKLQ---- 36 usage_00525.pdb 1 HAVVAIGYGS----EN---------D---VDYWLVRNSWGTNWGER-GYIKLQ---- 36 usage_00675.pdb 1 HAVNIVGYGN----YV---NSEGE-K---KSYWIVRNSWGPYWGDE-GYFKVD---- 41 usage_00876.pdb 1 ------GYGF----ESTES------D--NNKYWLVKNSWGEEWGMG-GYVKMA---- 34 usage_01027.pdb 1 ------GYGT----QG---------G---TDYWIVKNSWGLSWGER-GYIRMV---- 30 usage_01072.pdb 1 ------GYGD----LN---------G---KEYWLVKNSWGHNFGEE-GYIRMA---- 30 usage_01211.pdb 1 -AIVIVGYGT----EG---------G---VDYWIVKNSWDTTWGEE-GYMRIL---- 35 usage_01258.pdb 1 -GVLVVGYGD----LN---------G---KEYWLVKNSWGHNFGEE-GYIRMA---- 35 usage_01274.pdb 1 -KAFIVTLTGNLSSSG-----G--IW---SITAKVSDG--------TAYLDVDFVD- 37 usage_01368.pdb 1 --VL-CVGYD----D----------E---IRHFRIRNSWGNNVGED-GYFWMP---- 32 usage_01421.pdb 1 HAVTIVGYGT----EG---------G---IDYWIVKNSWGTTWGEE-GYMRIQ---- 36 usage_01422.pdb 1 HAVTIVGYGT----EG---------G---IDYWIVKNSWGTTWGEE-GYMRIQ---- 36 usage_01423.pdb 1 HAVTIVGYGT----EG---------G---IDYWIVKNSWGTTWGEE-GYMRIQ---- 36 usage_01448.pdb 1 ------YGFE----ST---------ESDNNKYWLVKNSWGEEWGMG-GYVKMA--KD 35 usage_01694.pdb 1 HGVLLVGYND----SA---------A---VPYWIIKNSWTTQWGEE-GYIRIA---- 36 ns gY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################