################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:10 2021 # Report_file: c_1181_41.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00232.pdb # 4: usage_00242.pdb # 5: usage_00294.pdb # 6: usage_00295.pdb # 7: usage_00332.pdb # 8: usage_00333.pdb # 9: usage_00363.pdb # 10: usage_00415.pdb # 11: usage_00577.pdb # 12: usage_00578.pdb # 13: usage_00950.pdb # 14: usage_00951.pdb # 15: usage_00952.pdb # # Length: 49 # Identity: 25/ 49 ( 51.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 49 ( 51.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 49 ( 49.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 VDVYGSNYYVNCYFS------S----KDG---KVTGGKTCMYGGITKHE 36 usage_00015.pdb 1 VDVYGSNYYVNCYFS------S----KD----KVTGGKTCMYGGITK-- 33 usage_00232.pdb 1 VDVYGSNYYVNCYFS------S----K--------GGKTCMYGGITKHE 31 usage_00242.pdb 1 VDVYGSNYYVNCYFS------S----KD-NVGKVTGGKTCMYGGITKHE 38 usage_00294.pdb 1 VDVYGSNYYVNCYFSS-----KD---N--------GGKTCMYGGITKHE 33 usage_00295.pdb 1 VDVYGSNYYVNCYFSS-----KD---N--------GGKTCMYGGITKHE 33 usage_00332.pdb 1 VDVYGSNYYVNCYFSSKDNVG-KVTS----------GKTCMYGGITKHE 38 usage_00333.pdb 1 VDVYGSNYYVNCYFSSKDNVG-KVTS----------GKTCMYGGITKHE 38 usage_00363.pdb 1 VDVYGSNYYVNCYFS------S----K--------GGKTCMYGGITKHE 31 usage_00415.pdb 1 VDVYGSNYYVNCYFS------S----K---------GKTCMYGGITKHE 30 usage_00577.pdb 1 VDVYGSNYYVNCYF----------------------GKTCMYGGITKHE 27 usage_00578.pdb 1 VDVYGSNYYVNCYF----------------------GKTCMYGGITKHE 27 usage_00950.pdb 1 VDVYGSNYYVNCYFS------S----------T-WHGKTCMYGGITK-- 30 usage_00951.pdb 1 VDVYGSNYYVNCYFS------S----------STWHGKTCMYGGITKHE 33 usage_00952.pdb 1 VDVYGSNYYVNCYFS------S-------------HGKTCMYGGITK-- 28 VDVYGSNYYVNCYF GKTCMYGGITK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################