################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:52 2021 # Report_file: c_0083_3.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00223.pdb # 2: usage_00242.pdb # 3: usage_00243.pdb # 4: usage_00244.pdb # 5: usage_00245.pdb # # Length: 232 # Identity: 81/232 ( 34.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 208/232 ( 89.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/232 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 -IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQ 59 usage_00242.pdb 1 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHL 60 usage_00243.pdb 1 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHL 60 usage_00244.pdb 1 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHL 60 usage_00245.pdb 1 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHL 60 lPeviamLgfrldavksnaAaYlQHlCyrndkvKtdVrkLkGIpvLVgLLdhPkkeVhl usage_00223.pdb 60 AAAGALRN-LVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 118 usage_00242.pdb 61 GACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIK 120 usage_00243.pdb 61 GACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIK 120 usage_00244.pdb 61 GACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIK 120 usage_00245.pdb 61 GACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIK 120 gAcGALkN sfgRdqdNKiaikncdGvpalVrLLRkardmdlteviTGtLWNLSShDsiK usage_00223.pdb 119 EELIADALPVLADRVIIPFSGWC-----VVDPEVFFNATGCLRNLS-SADAGRQTMRNYS 172 usage_00242.pdb 121 MEIVDHALHALTDEVIIPHSGWE----HIEWESVLTNTAGCLRNVSSERSEARRKLRECD 176 usage_00243.pdb 121 MEIVDHALHALTDEVIIPHSGWERE-PHIEWESVLTNTAGCLRNVSSERSEARRKLRECD 179 usage_00244.pdb 121 MEIVDHALHALTDEVIIPHSGWERE-RHIEWESVLTNTAGCLRNVSSERSEARRKLRECD 179 usage_00245.pdb 121 MEIVDHALHALTDEVIIPHSGWEREPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECD 180 mEivdhALhaLtDeVIIPhSGWe iewesVltNtaGCLRNvS erseaRrklRecd usage_00223.pdb 173 GLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYN 224 usage_00242.pdb 177 GLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSY---------------- 212 usage_00243.pdb 180 GLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSY---------------- 215 usage_00244.pdb 180 GLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSY---------------- 215 usage_00245.pdb 181 GLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSY---------------- 216 GLvDaLifiVQaeigqkdsDsKlVENCvClLrNLSY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################