################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:28:52 2021 # Report_file: c_0662_36.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00081.pdb # 2: usage_00145.pdb # 3: usage_00161.pdb # 4: usage_00165.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00184.pdb # 8: usage_00185.pdb # 9: usage_00197.pdb # 10: usage_00221.pdb # 11: usage_00261.pdb # 12: usage_00295.pdb # 13: usage_00388.pdb # 14: usage_00389.pdb # 15: usage_00390.pdb # 16: usage_00403.pdb # 17: usage_00404.pdb # 18: usage_00440.pdb # 19: usage_00456.pdb # 20: usage_00538.pdb # # Length: 49 # Identity: 6/ 49 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 49 ( 69.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 49 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLII-- 41 usage_00145.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00161.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 43 usage_00165.pdb 1 IDPVGRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 47 usage_00166.pdb 1 IDPVGRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLLSASQDGKLIIWD 47 usage_00167.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 43 usage_00184.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 43 usage_00185.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00197.pdb 1 -------EWKVFAKRALCHGVYEINVVKWL-T--ILATGGDDGIVNFWS 39 usage_00221.pdb 1 IDPVGRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 47 usage_00261.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 43 usage_00295.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIW- 41 usage_00388.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00389.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00390.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00403.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00404.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00440.pdb 1 -----RIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 42 usage_00456.pdb 1 IDPVGRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 47 usage_00538.pdb 1 ----GRIQMRTRRTLR-GH-LAKIYAMHWGTDSRLLVSASQDGKLIIWD 43 qmrtrrtlr gH lakIyamhWg d lL sasqDGklii #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################