################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:14 2021 # Report_file: c_0335_6.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00056.pdb # # Length: 90 # Identity: 82/ 90 ( 91.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/ 90 ( 91.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 90 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 PAFPTGLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGV 60 usage_00034.pdb 1 -----GLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGV 55 usage_00056.pdb 1 -----GLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGV 55 GLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGV usage_00033.pdb 61 ATGTKYYYVVSAVSNGVETLNSAEAIL--- 87 usage_00034.pdb 56 ATGTKYYYVVSAVSNGVETLNSAEAIL--- 82 usage_00056.pdb 56 ATGTKYYYVVSAVSNGVETLNSAEAILQYP 85 ATGTKYYYVVSAVSNGVETLNSAEAIL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################