################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:45:43 2021 # Report_file: c_0318_1.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00005.pdb # 5: usage_00006.pdb # 6: usage_00007.pdb # 7: usage_00012.pdb # 8: usage_00013.pdb # 9: usage_00014.pdb # 10: usage_00015.pdb # 11: usage_00039.pdb # 12: usage_00040.pdb # # Length: 182 # Identity: 176/182 ( 96.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 176/182 ( 96.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/182 ( 2.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00003.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00004.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00005.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00006.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00007.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00012.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00013.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00014.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00015.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00039.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 usage_00040.pdb 1 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 60 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT usage_00002.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00003.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00004.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00005.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00006.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00007.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00012.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVS 120 usage_00013.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVS 120 usage_00014.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFS 120 usage_00015.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFS 120 usage_00039.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 usage_00040.pdb 61 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 120 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN PQTFTS S usage_00002.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00003.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00004.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG-- 178 usage_00005.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG-- 178 usage_00006.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00007.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00012.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG-- 178 usage_00013.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG-- 178 usage_00014.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG-- 178 usage_00015.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00039.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 usage_00040.pdb 121 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLA 180 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIG usage_00002.pdb 181 FD 182 usage_00003.pdb 181 FD 182 usage_00004.pdb -- usage_00005.pdb -- usage_00006.pdb 181 FD 182 usage_00007.pdb 181 FD 182 usage_00012.pdb -- usage_00013.pdb -- usage_00014.pdb -- usage_00015.pdb 181 FD 182 usage_00039.pdb 181 FD 182 usage_00040.pdb 181 FD 182 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################