################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:38 2021 # Report_file: c_1327_85.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00001.pdb # 2: usage_00180.pdb # 3: usage_00190.pdb # 4: usage_00751.pdb # 5: usage_00793.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 34 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 34 ( 29.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TSGQVDRLG-KVLLGGA-PVN--HALAQ-IS--- 26 usage_00180.pdb 1 RAPLYRRVATMRVDTNRRNPGAVVRHILSR-L-- 31 usage_00190.pdb 1 -KPLYQAMADLVYPTDDLNPRQLATQILVD-I-- 30 usage_00751.pdb 1 RAPLYRRVATMRVDTNRRNPGAVVRHILSR-LQV 33 usage_00793.pdb 1 RAPLYRRVATMRVDTNRRNPGAVVRHILSR-LQ- 32 ply r a t np il #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################