################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:26:50 2021 # Report_file: c_0199_18.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00021.pdb # 7: usage_00022.pdb # 8: usage_00126.pdb # 9: usage_00139.pdb # 10: usage_00140.pdb # 11: usage_00141.pdb # 12: usage_00208.pdb # 13: usage_00209.pdb # 14: usage_00215.pdb # 15: usage_00216.pdb # 16: usage_00217.pdb # 17: usage_00218.pdb # 18: usage_00229.pdb # 19: usage_00349.pdb # 20: usage_00427.pdb # # Length: 176 # Identity: 8/176 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/176 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/176 ( 30.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 58 usage_00013.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 58 usage_00018.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGKQAL 58 usage_00019.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGKQAL 58 usage_00020.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGKQAL 58 usage_00021.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGKQAL 58 usage_00022.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGKQAL 58 usage_00126.pdb 1 RGAVEALAKSLE-----------GLPALRQRIARLYGEWYGVDLDP-GRVVITPGSSGGF 48 usage_00139.pdb 1 -HVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 57 usage_00140.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 58 usage_00141.pdb 1 QHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAF 59 usage_00208.pdb 1 KHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-DNILVTNGGKQSI 58 usage_00209.pdb 1 KHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-DNILVTNGGKQSI 58 usage_00215.pdb 1 KHIKEAAKRAIDAD-ESHYTGMAGLLALRQAASAFVKEKYHLTYNPDNEILVTIGATEAL 59 usage_00216.pdb 1 KHIKEAAKRAIDA----------GLLALRQAASAFVKEKYHLTYNPDNEILVTIGATEAL 50 usage_00217.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 58 usage_00218.pdb 1 EHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTP-EETIVTVGGSQAL 58 usage_00229.pdb 1 EHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGVDITP-DDVRVTAAVTEAL 58 usage_00349.pdb 1 PEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYH-CPEAPLEA-KDVILTSGCSQAI 58 usage_00427.pdb 1 -------------------------PSLINSLIKLYSPIYNTELKA-ENVTVTTGANEGI 34 lr t g usage_00012.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00013.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00018.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00019.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00020.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00021.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00022.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00126.pdb 49 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPEN-----------RLQPV 97 usage_00139.pdb 58 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 106 usage_00140.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00141.pdb 60 LMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEED-----------EFRLN 108 usage_00208.pdb 59 FNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET-----------QFKVS 107 usage_00209.pdb 59 FNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET-----------QFKVS 107 usage_00215.pdb 60 SASLTAILEPGDKVLLPAPAYPGYEPVVNLVGAEVVEIDTR-SN-----------DFVLT 107 usage_00216.pdb 51 SASLTAILEPGDKVLLPAPAYPGYEPVVNLVGAEVVEIDTR-SN-----------DFVLT 98 usage_00217.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00218.pdb 59 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE-----------GFVPD 107 usage_00229.pdb 59 QLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE-----------DWQPD 107 usage_00349.pdb 59 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEK-----------SWEID 107 usage_00427.pdb 35 LSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPP-KELDQRNTRGEEWTID 93 G P Y v usage_00012.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00013.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00018.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00019.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00020.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00021.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00022.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00126.pdb 98 PADFAGLD--------LAGLVASPANPTGTL-DHA-AGALIEAAQAQGASFISDE- 142 usage_00139.pdb 107 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 156 usage_00140.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00141.pdb 109 VDELKKYV---TDKTRAL-IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE- 159 usage_00208.pdb 108 PEQIRQAI---TPKTKLL-VFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDE- 158 usage_00209.pdb 108 PEQIRQAI---TPKTKLL-VFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDE- 158 usage_00215.pdb 108 PEMLEEAILKEGEALKAV-ILNYPTNPTGVTYSRQQIKNLAEVLKKYPIFVISDE- 161 usage_00216.pdb 99 PEMLEEAILKEGEALKAV-ILNYPTNPTGVTYSRQQIKNLAEVLKKYPIFVISDE- 152 usage_00217.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00218.pdb 108 PERVRRAI---TPRTKAL-VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD-- 157 usage_00229.pdb 108 IDDIRKKI---TDRTKAI-AVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEI 159 usage_00349.pdb 108 LKQLEYLI---DEKTACL-IVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE- 158 usage_00427.pdb 94 FEQFEKAI---TSKTKAV-IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDE- 144 P NP G sD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################