################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:37:07 2021 # Report_file: c_0199_29.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00302.pdb # 8: usage_00303.pdb # 9: usage_00333.pdb # 10: usage_00334.pdb # 11: usage_00335.pdb # 12: usage_00336.pdb # 13: usage_00337.pdb # 14: usage_00338.pdb # 15: usage_00339.pdb # 16: usage_00340.pdb # # Length: 152 # Identity: 23/152 ( 15.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/152 ( 15.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/152 ( 9.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 RARLYERLDRALDSQWLSN-------GGPLVREFEERVAGLAGVRHAVATCNATAGLQLL 53 usage_00034.pdb 1 -ARLYERLDRALDSQWLSN-------GGPLVREFEERVAGLAGVRHAVATCNATAGLQLL 52 usage_00042.pdb 1 -DRTRRKIEEVFQSNRWAISGYWTGEE-SMERKFAKAFADFNGVPYCVPTTSGSTALMLA 58 usage_00043.pdb 1 -DRTRRKIEEVFQSNRWAISGYWTGEE-SMERKFAKAFADFNGVPYCVPTTSGSTALMLA 58 usage_00166.pdb 1 -EETIQGVVEVLRSGWIT--------TGPQCQKFEAALSEYCGGRPVRVFNSGTCTLEIG 51 usage_00167.pdb 1 -EETIQGVVEVLRSGWIT--------TGPQCQKFEAALSEYCGGRPVRVFNSGTCTLEIG 51 usage_00302.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00303.pdb 1 ---ERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 50 usage_00333.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00334.pdb 1 ---ERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 50 usage_00335.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00336.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00337.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00338.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00339.pdb 1 --NERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 51 usage_00340.pdb 1 ---ERDYVLECMDTTWISS-------VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLA 50 F G L usage_00033.pdb 54 AHAAGLT--GEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSA 111 usage_00034.pdb 53 AHAAGLT--GEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSA 110 usage_00042.pdb 59 LEALGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKA 118 usage_00043.pdb 59 LEALGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKA 118 usage_00166.pdb 52 LRIAGVGPGDEVITTPASWVSTSNVIIETGATPVFADIDPVTRNIDLDKLEQAITPRTKA 111 usage_00167.pdb 52 LRIAGVGPGDEVITTPASWVSTSNVIIETGATPVFADIDPVTRNIDLDKLEQAITPRTKA 111 usage_00302.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00303.pdb 51 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 110 usage_00333.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00334.pdb 51 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 110 usage_00335.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00336.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00337.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00338.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00339.pdb 52 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 111 usage_00340.pdb 51 LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKA 110 G EVI PV D T D T T A usage_00033.pdb 112 VVGVHLWGRPCAADQLRKVADEHGLRLYFDAA 143 usage_00034.pdb 111 VVGVHLWGRPCAADQLRKVADEHGLRLYFDA- 141 usage_00042.pdb 119 IIPVHLFGSMANMDEINEIAQEHNLFVIEDC- 149 usage_00043.pdb 119 IIPVHLFGSMANMDEINEIAQEHNLFVIEDC- 149 usage_00166.pdb 112 IIPVFLSGLPVDMDRLYAIARAHKLRVIEDA- 142 usage_00167.pdb 112 IIPVFLSGLPVDMDRLYAIARAHKLRVIEDA- 142 usage_00302.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00303.pdb 111 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 141 usage_00333.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00334.pdb 111 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 141 usage_00335.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00336.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00337.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00338.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00339.pdb 112 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 142 usage_00340.pdb 111 IMPVHLYGQICDMDPILEVARRHNLLVIEDA- 141 V L G D A H L D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################