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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:30:51 2021
# Report_file: c_1109_17.html
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#====================================
# Aligned_structures: 6
#   1: usage_00043.pdb
#   2: usage_00044.pdb
#   3: usage_00091.pdb
#   4: usage_00092.pdb
#   5: usage_00328.pdb
#   6: usage_00329.pdb
#
# Length:         91
# Identity:       71/ 91 ( 78.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     75/ 91 ( 82.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 91 ( 12.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00043.pdb         1  -PAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--LDLKVSIHQMEME   55
usage_00044.pdb         1  TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--LDLKVSIHQMEME   56
usage_00091.pdb         1  TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--EDLKVSIHQMEME   56
usage_00092.pdb         1  TPAELIERLEQAWMNEKFAPELLESKPEIVECVM--EQLEHMEEN--EDLKVSIHQMEME   56
usage_00328.pdb         1  -PAELIERLEQAW-NEKFAPELLESKPEIVECVE---QLEHEENLR-EDLKVSIHQ-E-E   52
usage_00329.pdb         1  TPAELIERLEQAW-NEKFAPELLESKPEIVECVEQLEHEENLRRAKREDLKVSIHQ-E-E   57
                            PAELIERLEQAW NEKFAPELLESKPEIVECV    qlEh e     DLKVSIHQ E E

usage_00043.pdb        56  RIRYVLSSYLRCRLMKIEKFFPHVLEKEKT-   85
usage_00044.pdb        57  RIRYVLSSYLRCRLMKIEKFFPHVLEKEKTR   87
usage_00091.pdb        57  RIRYVLSSYLRCRLMKIEKFFPHVLEKEKTR   87
usage_00092.pdb        57  RIRYVLSSYLRCRLMKIEKFFPHVLEKEKT-   86
usage_00328.pdb        53  RIRYVLSSYLRCRL-KIEKFFPHVLEKEKTR   82
usage_00329.pdb        58  RIRYVLSSYLRCRL-KIEKFFPHVLEKEKTR   87
                           RIRYVLSSYLRCRL KIEKFFPHVLEKEKT 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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