################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:45 2021 # Report_file: c_0514_4.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00098.pdb # 2: usage_00119.pdb # 3: usage_00247.pdb # 4: usage_00278.pdb # 5: usage_00497.pdb # 6: usage_00523.pdb # 7: usage_00622.pdb # 8: usage_00660.pdb # # Length: 108 # Identity: 43/108 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/108 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/108 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 -YLSVFWEVLSERFAESACNTVRVVLNGSLENAFDSMSIFGRVQAPNLRPQ--VELEAWL 57 usage_00119.pdb 1 -YLSVFWEVLSERFAESACNTVRVVLNGSLENAFDSMSIFGRVEAPNLRPQ--VELEAWL 57 usage_00247.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVGVHNLQPEKVQTLEAWV 58 usage_00278.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVQVHNLQPEKVQTLEAWV 58 usage_00497.pdb 1 NPVSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 60 usage_00523.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVQVHNLQPEKVQTLEAWV 58 usage_00622.pdb 1 -PVSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVQVHNLQPEKVQTLEAWV 59 usage_00660.pdb 1 --VSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGSVEVHNLQPEKVQTLEAWV 58 SVFW S RFAE AC V V L GS FD S FG V NL P LEAW usage_00098.pdb 58 VHDTGKPPSDSCSGSSIRKLKSILDGRNVKFRCMDNLSRDQFL-QR-- 102 usage_00119.pdb 58 VHDTGKPPSDSCSGSSIRKLKSILDGRNVKFRCMDNLSRDQFL-QR-- 102 usage_00247.pdb 59 IHGGREDSRDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKN 106 usage_00278.pdb 59 IHGGREDSRDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKN 106 usage_00497.pdb 61 IHGGREDSRDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKN 108 usage_00523.pdb 59 IHG-----RDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKN 101 usage_00622.pdb 60 IHGGREDSRDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQC--- 104 usage_00660.pdb 59 IHG-----RDLCQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKN 101 H D C I L SI RN F C D FL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################