################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:36 2021 # Report_file: c_1056_57.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00163.pdb # 2: usage_00567.pdb # 3: usage_00639.pdb # 4: usage_00640.pdb # 5: usage_00826.pdb # 6: usage_00924.pdb # # Length: 63 # Identity: 6/ 63 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 63 ( 25.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 63 ( 39.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 NEPTAAAIAYG--LDKK-----V-GAERNVLIFDLGGGTFDVSILTIED--GIFEV---- 46 usage_00567.pdb 1 --PTAAALAYGLD------------GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEV-- 44 usage_00639.pdb 1 -EPTAAAIAYG--LDRT-----G-KGERNVLIFDLGGGTFDVSILTIDD--GIFEV---- 45 usage_00640.pdb 1 NDVTAAGVSYG---IFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK--GQLKVLGTA 55 usage_00826.pdb 1 NEPTAAAIAYG--LDKK-----V-GAERNVLIFDLGGGTFDVSILTIED--GIFEVKSTA 50 usage_00924.pdb 1 SEPAAAVLAYD--------------SDKIIVVADLGGSRSDVTVLASRS--GMYTILATV 44 ptAA aYg r DlGg d si G usage_00163.pdb --- usage_00567.pdb --- usage_00639.pdb --- usage_00640.pdb 56 CD- 57 usage_00826.pdb 51 GD- 52 usage_00924.pdb 45 HDY 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################