################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:34 2021 # Report_file: c_1344_26.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00011.pdb # 2: usage_00013.pdb # 3: usage_00042.pdb # 4: usage_00043.pdb # 5: usage_00044.pdb # 6: usage_00045.pdb # 7: usage_00083.pdb # 8: usage_00317.pdb # 9: usage_00423.pdb # 10: usage_00426.pdb # 11: usage_00427.pdb # 12: usage_00469.pdb # # Length: 49 # Identity: 3/ 49 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 49 ( 28.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 49 ( 55.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 -SEQTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 35 usage_00013.pdb 1 -SEQTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 35 usage_00042.pdb 1 -SEQTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 35 usage_00043.pdb 1 -SEQTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 35 usage_00044.pdb 1 -SEQTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 35 usage_00045.pdb 1 ---QTDA-------------AFAALKDYWTDLLSTYSVSSNDEKLDRMV 33 usage_00083.pdb 1 -SEQVDA-------------ALEALNSYWTNLLSTYSVSSTDEKLDRMV 35 usage_00317.pdb 1 -SEQVDA-------------ALEALNSYWTNLLSTYSVSSTDEKLDRMV 35 usage_00423.pdb 1 TVEKVDK-------------AFEELKSYWNALLSKYFLESHDEKLNRMV 36 usage_00426.pdb 1 -SEQVDA-------------ALEALNSYWTNLLSTYSVSSTDEKLDRMV 35 usage_00427.pdb 1 -SEQVDA-------------ALEALNSYWTNLLSTYSVSSTDEKLDRMV 35 usage_00469.pdb 1 -------STHHNVRLLMLDDQRL-LLPHWAKVVLTDP-----EAAKYV- 35 a L yW llsty Ekl rm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################