################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:26:59 2021 # Report_file: c_1484_159.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00147.pdb # 2: usage_00597.pdb # 3: usage_00598.pdb # 4: usage_00890.pdb # 5: usage_00971.pdb # 6: usage_00972.pdb # 7: usage_00973.pdb # 8: usage_00974.pdb # 9: usage_00975.pdb # 10: usage_00976.pdb # 11: usage_00977.pdb # 12: usage_01415.pdb # 13: usage_01677.pdb # 14: usage_01841.pdb # 15: usage_02120.pdb # 16: usage_02121.pdb # 17: usage_02448.pdb # 18: usage_02449.pdb # 19: usage_02450.pdb # 20: usage_02539.pdb # 21: usage_03347.pdb # 22: usage_03381.pdb # 23: usage_03563.pdb # 24: usage_04253.pdb # 25: usage_04321.pdb # 26: usage_04432.pdb # 27: usage_04584.pdb # 28: usage_04593.pdb # # Length: 135 # Identity: 0/135 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/135 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 101/135 ( 74.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00147.pdb 1 ----------------------------------SGIV---QQQND---LLRAI-EAQQH 19 usage_00597.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_00598.pdb 1 -----------------------------------------QQQNN---LLRAI-EAQQH 15 usage_00890.pdb 1 QIEDKIEEILSKIYHIENEIARIKKLIGEARQLLSGIV---QQQNN---LLRAI-EAQQH 53 usage_00971.pdb 1 ----------------------------------SGIV---QQQNN---LLRAI-EAQQH 19 usage_00972.pdb 1 ----------------------------------SGIV---QQQNN---LLRAI-EAQQH 19 usage_00973.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_00974.pdb 1 ----------------------------------SGIV---QQQNN---LLRAI-EAQQH 19 usage_00975.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_00976.pdb 1 ----------------------------------SGIV---QQQNN---LLRAI-EAQQH 19 usage_00977.pdb 1 ----------------------------------SGIV---QQQNN---LLRAI-EAQQH 19 usage_01415.pdb 1 -----------------------------------GIV---QQQNN---LLRAI-EAQQH 18 usage_01677.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_01841.pdb 1 ---------------------------GAGQSNDSGIV---QQQSN---LLRAI-EAQQH 26 usage_02120.pdb 1 ------------------------------------------VQQQ---NNLLR-AIEAQ 14 usage_02121.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_02448.pdb 1 -----------------------------------GIV---QQQNN---LLRAI-EAQQH 18 usage_02449.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_02450.pdb 1 -----------------------------------GIV---QQQNN---LLRAI-EAQQH 18 usage_02539.pdb 1 -----------------------------------------IVQQQ---SNLLR-AIEAQ 15 usage_03347.pdb 1 ---------------------------------TVQAR---QLLSG---IVQQQ-NDLLR 20 usage_03381.pdb 1 ---------------------------------TVQAR---QLLSG---IVQQQ-NDLLR 20 usage_03563.pdb 1 ---------------------------TV-QVRKLLSG---IVQQQ---SNLLR-AIEAQ 25 usage_04253.pdb 1 -----------------------------------GIV---QQQNN---LLRAI-EAQQH 18 usage_04321.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_04432.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_04584.pdb 1 --------------------------------------GIVQQ---QSNLLRA-PEAQQH 18 usage_04593.pdb 1 ------------------------------------IV---QQQNN---LLRAI-EAQQH 17 usage_00147.pdb 20 LLQLTVWGIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQ------ 63 usage_00597.pdb 18 LLQLTVWGIKQLQA-----------GG---W-MEWDREINNYTSLIHSLIEESQN----- 57 usage_00598.pdb 16 LLQLTVWGIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQ------ 59 usage_00890.pdb 54 LLQLTVWGIKQLQA--RIL---A-VERYLKW-MEWDREINNYTSLIHSLIEESQNQQEKN 106 usage_00971.pdb 20 LLQLTVRGIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQNQQEK- 68 usage_00972.pdb 20 LLQLTVWGTKQLQA--RLS-G-G-RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 70 usage_00973.pdb 18 LLQLTVWGTKQLQA--RI------RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 65 usage_00974.pdb 20 LLQLTVWGTKQLQA--RI------RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 67 usage_00975.pdb 18 LLQLTVWGTKQLQA--RILSG-G-RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 69 usage_00976.pdb 20 LLQLTVWGTKQLQA--RIL-SGG-RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 71 usage_00977.pdb 20 LLQLTVWGTKQLQA--RIL-----RGG---W-MEWDREINNYTSLIHSLIEESQNQQEKN 68 usage_01415.pdb 19 LLQLTVWGIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQNQQEK- 67 usage_01677.pdb 18 LLQLTVWAIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQ------ 61 usage_01841.pdb 27 LLQLTVWGIKQLQT--RVL-G-G-GGR---W-MQWDKEISNYTNTVYRLLEESQNQQERN 77 usage_02120.pdb 15 QHLLQLTVWGIKQL---Q------------G-RGGWMEWDREANNYTSLIHSLIEESQNQ 58 usage_02121.pdb 18 LLQLTVWGIKQLQA-----------GG---W-MEWDREINNYTSLAHSLIEESQNQQ--- 59 usage_02448.pdb 19 LLQLTVWGIKQLQA--RILSG-G-RGG---W-MEWDREIEELIKKSEELIKKIEEQIK-- 68 usage_02449.pdb 18 LLQLTVWGIKQLQA--RILSG-G-RGG---W-MEWDREIEELIKKSEELIKKIEEQIKKQ 69 usage_02450.pdb 19 LLQLTVWGIKQLQA--RILSG-G-RGG---W-MEWDREIEELIKKSEELIKKIEEQIKKQ 70 usage_02539.pdb 16 QHLLQLTVWGIKQGGG--------GSE---W-EREISNYTDIIYRLIEESQNQQEKNEQE 63 usage_03347.pdb 21 AIEAQQHLLQLTVW--GIK-----------QLMEWDREINNYTSLIHSLIEESQNQQEKN 67 usage_03381.pdb 21 AIEAQQHLLQLTVW--GIK-----------QLMEWDREINNYTSLIHSLIEKSQNQQEKN 67 usage_03563.pdb 26 QHLLKLTVWGIKQL--QAR----VWLQ---W-DKEISNYTHIIYELIEESQKQQEKNEQE 75 usage_04253.pdb 19 LLQLTVWGIKQLQA--RS------RGG---W-MEWDREINNYTSLIHSLIEESQNLQ--- 63 usage_04321.pdb 18 LLQATVWGIKQLQA--RSG---G-RGG---W-MEWDREINNYTSLIHSLIEESQNQQE-- 65 usage_04432.pdb 18 LLQLTVWGIKQLQA--ASG---G-RGG---W-MEWDREINNYTSLIHSLIEESQ------ 61 usage_04584.pdb 19 L--LKL----------------------------TVWGIKQLQARVLAVERYLRDQQLLG 48 usage_04593.pdb 18 LLQLTVWGIKQLQA--RILSG-G-RGG---W-EEWDKKIEELIKKSEELIKKIEEQIKKQ 69 usage_00147.pdb --------------- usage_00597.pdb --------------- usage_00598.pdb --------------- usage_00890.pdb 107 EQELLEL-------- 113 usage_00971.pdb --------------- usage_00972.pdb 71 EQE------------ 73 usage_00973.pdb 66 EQEL----------- 69 usage_00974.pdb 68 EQE------------ 70 usage_00975.pdb 70 EQEL----------- 73 usage_00976.pdb 72 EQEL----------- 75 usage_00977.pdb 69 EQEL----------- 72 usage_01415.pdb --------------- usage_01677.pdb --------------- usage_01841.pdb 78 EKDLLAL-------- 84 usage_02120.pdb 59 Q-------------- 59 usage_02121.pdb --------------- usage_02448.pdb --------------- usage_02449.pdb 70 E-------------- 70 usage_02450.pdb --------------- usage_02539.pdb 64 LLALDKWASLWNWFD 78 usage_03347.pdb 68 EQELLE--------- 73 usage_03381.pdb 68 EQELL---------- 72 usage_03563.pdb 76 LLELDKW-------- 82 usage_04253.pdb --------------- usage_04321.pdb --------------- usage_04432.pdb --------------- usage_04584.pdb 49 IWG------------ 51 usage_04593.pdb 70 E-------------- 70 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################