################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:55 2021 # Report_file: c_1429_22.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00039.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00595.pdb # 5: usage_00668.pdb # 6: usage_00669.pdb # 7: usage_00670.pdb # 8: usage_00973.pdb # 9: usage_01060.pdb # 10: usage_01219.pdb # 11: usage_01230.pdb # 12: usage_01361.pdb # 13: usage_01362.pdb # 14: usage_01497.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 65 ( 1.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 65 ( 55.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 --YLRVAGDLRKKIVDGSLP-PHTRL-P-SQARIREEYG---------VSDTVALEARKV 46 usage_00085.pdb 1 -IYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 47 usage_00086.pdb 1 PIYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 48 usage_00595.pdb 1 PKYYRLKKHLLDMTR-T--QTPGTPV-P-PERTLAAEFD---------TSRTTVRQALQE 46 usage_00668.pdb 1 -IYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 47 usage_00669.pdb 1 -IYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 47 usage_00670.pdb 1 -IYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 47 usage_00973.pdb 1 --------KTVSDDK----------T-DPDLVRSALREAVFNGKTNWN-YIQAILRNWRH 40 usage_01060.pdb 1 -PAGFAEKYIIESIWNGRFP-PGSIL-P-AERELSELIG---------VTRTTLREVLQR 47 usage_01219.pdb 1 -VYLQLVDRIKNEVATDVLS-ANDQL-P-SVRETALQEK---------INPNTVAKAYKE 47 usage_01230.pdb 1 -ARTVIEEKLRNAIIDGSLP-SGTAL-R--QQELATLFG---------VSR-PVREALRQ 45 usage_01361.pdb 1 PIYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 48 usage_01362.pdb 1 -IYYQIMEQLKTQIKNGELQ-PDMPL-P-SEREYAEQFG---------ISRMTVRQALSN 47 usage_01497.pdb 1 -LFEVIASKIKDSINRDEYK-T----GP-NETALQEIYS---------SSRTTIRRAVDL 44 usage_00039.pdb 47 LAEG- 50 usage_00085.pdb 48 LVNEG 52 usage_00086.pdb 49 LVNEG 53 usage_00595.pdb 47 LVVEG 51 usage_00668.pdb 48 LVNEG 52 usage_00669.pdb 48 LVNEG 52 usage_00670.pdb 48 LVNE- 51 usage_00973.pdb 41 EG--- 42 usage_01060.pdb 48 LA--- 49 usage_01219.pdb 48 LEAQK 52 usage_01230.pdb 46 LEAQS 50 usage_01361.pdb 49 LVNEG 53 usage_01362.pdb 48 LVNEG 52 usage_01497.pdb 45 LVEEG 49 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################