################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:25 2021 # Report_file: c_1397_60.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00076.pdb # 2: usage_00087.pdb # 3: usage_00131.pdb # 4: usage_00195.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # 7: usage_00209.pdb # 8: usage_00210.pdb # 9: usage_00224.pdb # 10: usage_00239.pdb # 11: usage_00410.pdb # 12: usage_00411.pdb # 13: usage_00412.pdb # 14: usage_00413.pdb # 15: usage_00414.pdb # 16: usage_00415.pdb # 17: usage_00416.pdb # 18: usage_00492.pdb # 19: usage_00493.pdb # 20: usage_00506.pdb # 21: usage_00507.pdb # 22: usage_00508.pdb # 23: usage_00628.pdb # 24: usage_00678.pdb # 25: usage_00679.pdb # 26: usage_00711.pdb # 27: usage_00712.pdb # 28: usage_00732.pdb # # Length: 47 # Identity: 3/ 47 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 47 ( 17.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 47 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00087.pdb 1 ----------ADFLRQLKRK-GFADARLAKLAGVREAEIRKLRDQYD 36 usage_00131.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00195.pdb 1 ---------EQPLLDMVMAYTRGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00196.pdb 1 ---------EQPLLDMVMQYTLGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00197.pdb 1 ---------EQPLLDMVMQYTRDNQTRAALMMGINRGTLRKKLKKYG 38 usage_00209.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00210.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00224.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00239.pdb 1 ----------AQVLKLFYAE-YPSTRKLAQRLGVSHTAIANKLKQYG 36 usage_00410.pdb 1 -YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 45 usage_00411.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKK-- 36 usage_00412.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00413.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00414.pdb 1 ----------QPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYG 37 usage_00415.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00416.pdb 1 ----------QPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYG 37 usage_00492.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00493.pdb 1 LYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 46 usage_00506.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKK-- 36 usage_00507.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00508.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00628.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLCKKLKKY- 37 usage_00678.pdb 1 ---------EQPLLDMVMQYTYGNQTRAALMMGINRGTLRKKLKKYG 38 usage_00679.pdb 1 ---------EQPLLDMVMQYTRGNATRAALMMGINRGTLRKKLKKYG 38 usage_00711.pdb 1 ----------QPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKK-- 35 usage_00712.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 usage_00732.pdb 1 ---------EQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKY- 37 L r A G kklk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################