################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:17 2021 # Report_file: c_1442_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_03235.pdb # 2: usage_03243.pdb # 3: usage_03244.pdb # 4: usage_08717.pdb # 5: usage_08727.pdb # 6: usage_08739.pdb # 7: usage_08749.pdb # 8: usage_08765.pdb # 9: usage_16879.pdb # # Length: 54 # Identity: 3/ 54 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 54 ( 31.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 54 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_03235.pdb 1 --DVRLVGAPPSSIGKFGADTDNWIWP------RHTGDF-------SIFRIYAD 39 usage_03243.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_03244.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_08717.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_08727.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_08739.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_08749.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGDF-------AFYRAYVG 39 usage_08765.pdb 1 --DVRLAYAPPGSVGKFGGDIDNWMWP------RHTGAF-------AFYRAYVG 39 usage_16879.pdb 1 GRLAYLPV-----------GRVGSKTPASGPVDAHLVPLEEPVPSHW--TVVPD 41 dvrL d dnw wP rHtg f r y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################