################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:07 2021 # Report_file: c_1200_407.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00844.pdb # 2: usage_01345.pdb # 3: usage_01347.pdb # 4: usage_01351.pdb # 5: usage_01355.pdb # 6: usage_01358.pdb # 7: usage_02410.pdb # 8: usage_02490.pdb # 9: usage_03351.pdb # 10: usage_03591.pdb # 11: usage_04415.pdb # 12: usage_04912.pdb # 13: usage_05011.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 62 ( 4.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 49/ 62 ( 79.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00844.pdb 1 -----GNTQPTIRKDG-----LKLVGSWKK-----DRATGDADEPELR----------V- 34 usage_01345.pdb 1 -------TQPTIRKDG-----LKLVGSWK-------------DEPELR----------V- 24 usage_01347.pdb 1 -------TQPTIRKDG-----LKLVGSWK-------------DEPELR----------V- 24 usage_01351.pdb 1 -------TQPTIRKDG-----LKLVGSWKE-------------PELRV------------ 23 usage_01355.pdb 1 ----------TIRKDG-----LKLVGSWKK------D------EPELR----------V- 22 usage_01358.pdb 1 -------TQPTIRKDG-----LKLVGSWKK------------DEPELR----------V- 25 usage_02410.pdb 1 ----------TIRKDG-----LKLVGSWKK-------------EPELR----------V- 21 usage_02490.pdb 1 ----------TIRKDG-----LKLVGSWKK-----DRATGDADEPELR----------V- 29 usage_03351.pdb 1 ----------TIRKDG-----LKLVGSWKD-------------EPELR------------ 20 usage_03591.pdb 1 ----------TIRKDG-----LKLVGSWKD-------------EPELR------------ 20 usage_04415.pdb 1 ----------GPERVGVFDDRFNVVGRLRG------------------TGGGASLSFNSH 32 usage_04912.pdb 1 RGATL--FNIIYDHAR------REATVRLGRPTNP-------DEMFVM----------R- 34 usage_05011.pdb 1 ----------TIRKDG-----LKLVGSWKK-----DRATGDADEPELR----------V- 29 g vg usage_00844.pdb -- usage_01345.pdb -- usage_01347.pdb -- usage_01351.pdb -- usage_01355.pdb -- usage_01358.pdb -- usage_02410.pdb -- usage_02490.pdb -- usage_03351.pdb -- usage_03591.pdb -- usage_04415.pdb 33 LD 34 usage_04912.pdb 35 F- 35 usage_05011.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################