################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:38 2021 # Report_file: c_0038_7.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00087.pdb # 4: usage_00088.pdb # 5: usage_00109.pdb # 6: usage_00110.pdb # # Length: 219 # Identity: 105/219 ( 47.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/219 ( 47.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/219 ( 5.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 60 usage_00086.pdb 1 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 60 usage_00087.pdb 1 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 60 usage_00088.pdb 1 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 60 usage_00109.pdb 1 FALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVG 60 usage_00110.pdb 1 ---AIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVG 57 AI G A A IVTGN VV KP T VE AGLP GV N PG G G usage_00085.pdb 61 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 120 usage_00086.pdb 61 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 120 usage_00087.pdb 61 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 120 usage_00088.pdb 61 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 120 usage_00109.pdb 61 DYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLD 120 usage_00110.pdb 58 DYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLD 117 DYLVDHP SLI FTGS G R ERAA V PGQ K I EMGGK D DADLD usage_00085.pdb 121 EAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAV 180 usage_00086.pdb 121 EAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAV 180 usage_00087.pdb 121 EAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAV 180 usage_00088.pdb 121 EAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAV 180 usage_00109.pdb 121 LAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPV 180 usage_00110.pdb 118 LAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPV 177 A L SAFGF GQKCSA SR VYD E V AK VG NYMG V usage_00085.pdb 181 ADDKAMKSIKEYAEIGKREGHVL-YESPVP-AGEGYFVP 217 usage_00086.pdb 181 ADDKAMKSIKEYAEIGKREGHVL-YESPVP-AGEGYFVP 217 usage_00087.pdb 181 ADDKAMKSIKEYAEIGKREGHVL-YESPVP-AGEGYFVP 217 usage_00088.pdb 181 ADDKAMKSIKEYAEIGKREGHVL-YESPVP-AGEGYFVP 217 usage_00109.pdb 181 IDEKAFEKIMSYIEIGKKEGRLMTGGEGDSS-------- 211 usage_00110.pdb 178 IDEKAFEKIMSYIEIGKKEGRLMTGGEGDSS-------- 208 D KA I Y EIGK EG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################