################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:20:47 2021 # Report_file: c_0069_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00008.pdb # 5: usage_00059.pdb # 6: usage_00094.pdb # # Length: 232 # Identity: 189/232 ( 81.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 230/232 ( 99.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/232 ( 0.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 60 usage_00002.pdb 1 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 60 usage_00003.pdb 1 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 60 usage_00008.pdb 1 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 60 usage_00059.pdb 1 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 60 usage_00094.pdb 1 -NVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVT 59 NVIFVAaLGGIGLDTSrELvKRnLKNfVILDRvENPtAlAELKAINPKVniTFhtYDVT usage_00001.pdb 61 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNVTTAILDFWDKR 120 usage_00002.pdb 61 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNVTTAILDFWDKR 120 usage_00003.pdb 61 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNVTTAILDFWDKR 120 usage_00008.pdb 61 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKR 120 usage_00059.pdb 61 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKR 120 usage_00094.pdb 60 VPIAETTKLLKTIFAQLKTVDVLINGAGILDDHQIERTIAVNYTGLVNTTTAILDFWDKR 119 VPvAEskKLLKkIFdQLKTVDiLINGAGILDDHQIERTIAiNfTGLVN TTAILDFWDKR usage_00001.pdb 121 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 180 usage_00002.pdb 121 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 180 usage_00003.pdb 121 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 180 usage_00008.pdb 121 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 180 usage_00059.pdb 121 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 180 usage_00094.pdb 120 KGGPGGIICNIGSVTGFNAIYQVPVYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITR 179 KGGPGGIIaNIcSVTGFNAIhQVPVYSasKAAVVsFTnSLAKLAPITGVTAYsiNPGITR usage_00001.pdb 181 TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLD 232 usage_00002.pdb 181 TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLD 232 usage_00003.pdb 181 TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLD 232 usage_00008.pdb 181 TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLD 232 usage_00059.pdb 181 TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLD 232 usage_00094.pdb 180 TTLVHKFNSWLDVEPQVAEKLLAHPTQPSLACAENFVKAIELNQNGAIWKLD 231 TpLVHtFNSWLDVEPrVAElLLsHPTQtSeqCgqNFVKAIEaNkNGAIWKLD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################