################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:53 2021 # Report_file: c_0162_17.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00042.pdb # 2: usage_00181.pdb # 3: usage_00221.pdb # 4: usage_00291.pdb # 5: usage_00302.pdb # 6: usage_00336.pdb # 7: usage_00386.pdb # 8: usage_00421.pdb # 9: usage_00463.pdb # 10: usage_00464.pdb # 11: usage_00508.pdb # 12: usage_00509.pdb # 13: usage_00531.pdb # 14: usage_00545.pdb # 15: usage_00578.pdb # # Length: 147 # Identity: 47/147 ( 32.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/147 ( 80.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/147 ( 18.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00181.pdb 1 -K--------------VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC 45 usage_00221.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00291.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00302.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00336.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL---SGPDQQRDFQREIQILKALHSDFIVKYRGVS 55 usage_00386.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00421.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00463.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00464.pdb 1 F-GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 58 usage_00508.pdb 1 ---SVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 56 usage_00509.pdb 1 ---SVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 56 usage_00531.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00545.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 usage_00578.pdb 1 --GSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 57 tgalVAvKqL sgPdqqrdfqrEiqilkalhsdfivkyrGvs usage_00042.pdb 58 YG----P-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 112 usage_00181.pdb 46 LT--S-T-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 101 usage_00221.pdb 58 YG----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 112 usage_00291.pdb 58 YGPGRPE-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 116 usage_00302.pdb 58 YGPGR-QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 116 usage_00336.pdb 56 YGPGRQS-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRA 114 usage_00386.pdb 58 YG----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 112 usage_00421.pdb 58 YG----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 112 usage_00463.pdb 58 YGPGRQS-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRA 116 usage_00464.pdb 59 YG----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 113 usage_00508.pdb 57 Y-----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 110 usage_00509.pdb 57 YG----S-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 111 usage_00531.pdb 58 YGPGR-QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 116 usage_00545.pdb 58 YGPGRQS-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 116 usage_00578.pdb 58 YGPGRQS-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRA 116 y lrLvMeylPsGCLrDflqrHrarldasrLLlyssQIcKGMeYLgsRRcVHR usage_00042.pdb 113 LAARNILVESEAHVKIADFGLAKLLPL 139 usage_00181.pdb 102 LAARNVLVKTPQHVKITDFGRAKLL-- 126 usage_00221.pdb 113 LAARNILVESEAHVKIADFGLAKLL-- 137 usage_00291.pdb 117 LAARNILVESEAHVKIADFGLAKLL-- 141 usage_00302.pdb 117 LAARNILVESEAHVKIADFGLAKLLPL 143 usage_00336.pdb 115 LAARNILVESEAHVKIADFGLAKLLPL 141 usage_00386.pdb 113 LAARNILVESEAHVKIADFGLAKLLPL 139 usage_00421.pdb 113 LAARNILVESEAHVKIADFGLAKLL-- 137 usage_00463.pdb 117 LAARNILVESEAHVKIADFGLAKLLPL 143 usage_00464.pdb 114 LAARNILVESEAHVKIADFGLAKLLPL 140 usage_00508.pdb 111 LAARNILVESEAHVKIADFGLAKLLPL 137 usage_00509.pdb 112 LAARNILVESEAHVKIADFGLAKLLPL 138 usage_00531.pdb 117 LAARNILVESEAHVKIADFGLAKLLPL 143 usage_00545.pdb 117 LAARNILVESEAHVKIADFGLAKLLPL 143 usage_00578.pdb 117 LAARNILVESEAHVKIADFGLAKLLPL 143 LAARNiLVeseaHVKIaDFGlAKLL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################