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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:01:55 2021
# Report_file: c_0622_1.html
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#====================================
# Aligned_structures: 4
#   1: usage_00003.pdb
#   2: usage_00004.pdb
#   3: usage_00014.pdb
#   4: usage_00015.pdb
#
# Length:        117
# Identity:       70/117 ( 59.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/117 ( 60.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/117 ( 12.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00003.pdb         1  SSGNWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNM   60
usage_00004.pdb         1  SSGNWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNM   60
usage_00014.pdb         1  ---NWVNVISDLKKIEDLI-Q--IDATLYTESDVHPSCKVTAMKCFLLELQVISLESGDA   54
usage_00015.pdb         1  ---NWVNVISDLKKIEDLIQSMHIDATLYTESDVHPSCKVTAMKCFLLELQVISLESGDA   57
                              NW  V  DL KIE LI s  ID TLYT SD HPSCKVTAM CFLLELQVI  E    

usage_00003.pdb        61  TLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS  117
usage_00004.pdb        61  TLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS  117
usage_00014.pdb        55  SIHDTVENLIILANNSLS-----TESGCKECEELEEKNIKEFLQSFVHIVQMFIN--  104
usage_00015.pdb        58  SIHDTVENLIILANNSLSSNGNVTESGCKECEELEEKNIKEFLQSFVHIVQMFI---  111
                               TV N   LAN  LS      ESGCKECEELEEK   EFLQSF  IVQMFI   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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