################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:55 2021 # Report_file: c_1200_283.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00684.pdb # 2: usage_01096.pdb # 3: usage_01097.pdb # 4: usage_02560.pdb # 5: usage_03316.pdb # 6: usage_04982.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 61 ( 75.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00684.pdb 1 N------LVN----TNA----GF-TARLKNLPSSPVFGSNVD-------NVLLTAEY--- 35 usage_01096.pdb 1 -TSLRNVSCEVDMFKTLH--GSA-LFQRG--------------------QTQVLCTVTF- 35 usage_01097.pdb 1 -TSLRNVSCEVDMFKTLH--GSA-LFQRG--------------------QTQVLCTVTF- 35 usage_02560.pdb 1 -----KIQARMGVFAQAD--GSA-YIEQG--------------------NTKALAVVY-- 30 usage_03316.pdb 1 -DEFRKVEIIPNVIEKAE--GSA-LVKLG--------------------DTQVVVGVKMQ 36 usage_04982.pdb 1 ----QEVMLQWD------AANSITNLWLH-------------EAGHSSVD-FLVR----- 31 s usage_00684.pdb - usage_01096.pdb - usage_01097.pdb - usage_02560.pdb - usage_03316.pdb - usage_04982.pdb 32 I 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################