################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:16 2021 # Report_file: c_1164_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00223.pdb # 2: usage_00622.pdb # 3: usage_00734.pdb # 4: usage_00803.pdb # 5: usage_00870.pdb # 6: usage_01379.pdb # 7: usage_01555.pdb # # Length: 43 # Identity: 7/ 43 ( 16.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 43 ( 53.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 43 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 FVLDANQAVDNYWIRANPNF--GNVGFDG---G-INSAILRYD 37 usage_00622.pdb 1 FVLNANQTVGNYWIRANPNF--GTVGFAG---G-INSAILRYQ 37 usage_00734.pdb 1 FTLNANQAVDNYWIRANPNF--GNVGFNG---G-INSAILRYD 37 usage_00803.pdb 1 FVLNADQDVGNYWIRALPNS--GTRNFDG---G-VNSAILRYD 37 usage_00870.pdb 1 VVIDASRAPDNYWFNVTFGGQAACG----GSLNPHPAAIFHYA 39 usage_01379.pdb 1 FVLNANQPVGNYWIRAQPNS--GGQGFDG---G-INSAILRYE 37 usage_01555.pdb 1 FVLNANQAVDNYWIRANPNF--GNVGFNG---G-INSAILRYD 37 fvl A q v NYWira pn g g nsAIlrY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################