################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:09 2021 # Report_file: c_0170_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00042.pdb # # Length: 169 # Identity: 139/169 ( 82.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 141/169 ( 83.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/169 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 ---RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 57 usage_00017.pdb 1 ---RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 57 usage_00018.pdb 1 ---RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 57 usage_00036.pdb 1 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 60 usage_00037.pdb 1 --MRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 58 usage_00038.pdb 1 --MRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 58 usage_00042.pdb 1 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIR 60 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGlTSIR usage_00016.pdb 58 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA-LEEEELRKAILVVFANKQDE----- 111 usage_00017.pdb 58 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA-LEEEELRKAILVVFANKQDE----- 111 usage_00018.pdb 58 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA-LEEEELRKAILVVFANKQDE----- 111 usage_00036.pdb 61 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 120 usage_00037.pdb 59 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 118 usage_00038.pdb 59 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 118 usage_00042.pdb 61 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 120 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA LEEEELRKAILVVFANKQD usage_00016.pdb 112 -QATSS-EANSLGLPALKDRKWQIFKTSATKGTGLDEAEWLVETLK-SR 157 usage_00017.pdb 112 -QATSS-EANSLGLPALKDRKWQIFKTSATKGTGLDEAEWLVETLK-SR 157 usage_00018.pdb 112 -QATSS-EANSLGLPALKDRKWQIFKTSATKGTGLDEAEWLVETLK-SR 157 usage_00036.pdb 121 S----SEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS- 164 usage_00037.pdb 119 S----SEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS- 162 usage_00038.pdb 119 S----SEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL--K 161 usage_00042.pdb 121 P----SEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 165 S ANsLGLPALKDRKWQIFKTSATKGTGLDEA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################