################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:36 2021 # Report_file: c_0554_27.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00023.pdb # 2: usage_00025.pdb # 3: usage_00088.pdb # 4: usage_00090.pdb # 5: usage_00093.pdb # 6: usage_00152.pdb # 7: usage_00153.pdb # 8: usage_00154.pdb # 9: usage_00156.pdb # 10: usage_00158.pdb # 11: usage_00159.pdb # 12: usage_00161.pdb # 13: usage_00339.pdb # 14: usage_00340.pdb # 15: usage_00342.pdb # # Length: 66 # Identity: 35/ 66 ( 53.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 66 ( 53.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 66 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 --IVILVVNEGEAHVELVGPKG--ETLEYESYRAELSKDDVFVIPAAYPVAIKATSNVNF 56 usage_00025.pdb 1 --IVILVVNEGEAHVELVGPKG--ETLEYESYRAELSKDDVFVIPAAYPVAIKATSNVNF 56 usage_00088.pdb 1 --IVIMVINEGEAKIELVGLSDQEESLEVQRYRAELSEDDVFVIPAAYPVAINATSNLNF 58 usage_00090.pdb 1 --IVIMVINEGEAKIELVGLSD--ESLEVQRYRAELSEDDVFVIPAAYPVAINATSNLNF 56 usage_00093.pdb 1 KAIVIMVINEGEAKIELVGLSD-E--LEVQRYRAELSEDDVFVIPAAYPVAINATSNLNF 57 usage_00152.pdb 1 --IVVLVINEGEANIELVGI-----PLEVRKYRAELSEQDIFVIPAGYPVVVNATSDLNF 53 usage_00153.pdb 1 --IVVLVINEGEANIELVGI------LEVRKYRAELSEQDIFVIPAGYPVVVNATSDLNF 52 usage_00154.pdb 1 --IVVLVINEGEANIELVGI-----PLEVRKYRAELSEQDIFVIPAGYPVVVNATSDLNF 53 usage_00156.pdb 1 --IVILVINEGDANIELVGIK-----LEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 53 usage_00158.pdb 1 --IVILVINEGDANIELVGI-------EVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 51 usage_00159.pdb 1 --IVILVINEGDANIELVGIK----ELEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 54 usage_00161.pdb 1 KAIVILVINEGDANIELVGIK----PLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 56 usage_00339.pdb 1 KAIVILVINEGDANIELVGIK-----LEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 55 usage_00340.pdb 1 KAIVILVINEGDANIELVGIK----PLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 56 usage_00342.pdb 1 --IVILVINEGDANIELVGIK-----LEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 53 IV V NEG A ELVG E YRAELS D FVIPA YP ATS NF usage_00023.pdb 57 TGFGIN 62 usage_00025.pdb 57 TGFGIN 62 usage_00088.pdb 59 FAFGIN 64 usage_00090.pdb 57 FAFGIN 62 usage_00093.pdb 58 FAFGIN 63 usage_00152.pdb 54 FAFGIN 59 usage_00153.pdb 53 FAFGIN 58 usage_00154.pdb 54 FAFGIN 59 usage_00156.pdb 54 LAFGIN 59 usage_00158.pdb 52 LAFGIN 57 usage_00159.pdb 55 LAFGIN 60 usage_00161.pdb 57 LAFGIN 62 usage_00339.pdb 56 LAFGIN 61 usage_00340.pdb 57 LAFGIN 62 usage_00342.pdb 54 LAFGIN 59 FGIN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################