################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:47 2021 # Report_file: c_0797_50.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00021.pdb # 2: usage_00025.pdb # 3: usage_00145.pdb # 4: usage_00146.pdb # # Length: 84 # Identity: 39/ 84 ( 46.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 84 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 84 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -IVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEKFNSS 59 usage_00025.pdb 1 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEKFNSS 60 usage_00145.pdb 1 -VVLSLGGSVLS---NESEKIREFAKTIESVAQQNQVFVVVGGGKLAREYIKSARELGAS 56 usage_00146.pdb 1 -VVLSLGGSVLS---NESEKIREFAKTIESVAQQNQVFVVVGGGKLAREYIKSARELGAS 56 V GGSVL I E A V V VVVGGGKLAR YI A S usage_00021.pdb 60 ETFKDFIGIQITRANAL-LIAALR 82 usage_00025.pdb 61 ETFKDFIGIQITRANAL-LIAALR 83 usage_00145.pdb 57 ETFCDYIGIAATRLNAMLLISAI- 79 usage_00146.pdb 57 ETFCDYIGIAATRLNAMLLISAI- 79 ETF D IGI TR NA LI A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################