################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:38 2021 # Report_file: c_0708_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00114.pdb # 2: usage_00198.pdb # 3: usage_00352.pdb # 4: usage_00353.pdb # 5: usage_00361.pdb # 6: usage_00515.pdb # # Length: 57 # Identity: 5/ 57 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 57 ( 64.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 57 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 AET-EPVDTAGDA-ADDPAIWLDPKNPQNSKLITTNKKSGLAVYSLEGKMLHSYH-- 53 usage_00198.pdb 1 AET-EPVDTAGDA-ADDPAIWLDPKNPQNSKLITTNKKSGLAVYSLEGKMLHSYHT- 54 usage_00352.pdb 1 AET-EPVDTAGDA-ADDPAIWLDPKTPQNSKLITTNKKSGLVVYSLDGKMLHSYN-- 53 usage_00353.pdb 1 AET-EPVDTAGDA-ADDPAIWLDPKTPQNSKLITTNKKSGLVVYSLDGKMLHSYN-- 53 usage_00361.pdb 1 ---EIEVDSA--NEIIYMYGH----N-T-EYFIWADNRGTIGFQSYE-DDSQYI-VH 44 usage_00515.pdb 1 AET-EPVDTAGDA-ADDPAIWLDPKNPQNSKLITTNKKSGLAVYSLEGKMLHSYH-- 53 epVDtA a addpaiw q sklIttnkksgl vySl kmlhsy #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################