################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:12 2021 # Report_file: c_0585_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00011.pdb # 2: usage_00017.pdb # 3: usage_00030.pdb # 4: usage_00048.pdb # 5: usage_00060.pdb # 6: usage_00087.pdb # 7: usage_00093.pdb # 8: usage_00102.pdb # 9: usage_00108.pdb # 10: usage_00114.pdb # 11: usage_00184.pdb # 12: usage_00213.pdb # # Length: 90 # Identity: 1/ 90 ( 1.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 90 ( 4.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 90 ( 28.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ----KILVRNIPFQANQREIRELFST-----FGELKTVRLPK-K-M-TGTGAHR-GFGFV 47 usage_00017.pdb 1 ----DLIVLGLPWKTTEQDLKEYFST-----FGEVLMVQVKK-D-L-K-TGHSK-GFGFV 46 usage_00030.pdb 1 ---CKMFIGGLSWQTTQEGLREYFGQ-----FGEVKECLVMR-D-P-L-TKRSR-GFGFV 47 usage_00048.pdb 1 -----VYIKGFPTDATLDDIKEWLED-----KGQVLNIQMRR-T-L---HKAFK-GSIFV 44 usage_00060.pdb 1 ---KKIFVGGIKEDTEEHHLRDYFEQ-----YGKIEVIEIMT-D-R-G-SGKKR-GFAFV 47 usage_00087.pdb 1 ----KIFVGGLSPDTPEEKIREYFGG-----FGEVESIELPMDNKTN--KR--R-GFCFI 46 usage_00093.pdb 1 ---RSVYVGNVDYGSTAQDLEAHFSS-----CGSINRITILC-D-KF--SGHPK-GYAYI 47 usage_00102.pdb 1 ---RKLFIGGLSFETTDESLRSHFEQ-----WGTLTDCVVMR-D-P-N-TKRSR-GFGFV 47 usage_00108.pdb 1 -----IFVGGLSVNTTVEDVKHYFEQ-----FGKVDDAMLMF-D-K-T-TN-RHRGFGFV 45 usage_00114.pdb 1 -TGAKLLVSNLDFGVSDADIQELFAE-----FGTLKKAAVDY-D-R---SGRSL-GTADV 48 usage_00184.pdb 1 ---VAVEVRGLPPAVPDELLTLYFENRRRSGGGPVLSWQRL------------G-CGGVL 44 usage_00213.pdb 1 E---GKFIGGLSWDTTKKDLKDYFSK-----FGEVVDCTLKL-D-P-I-TGRSR-GFGFV 47 f G g usage_00011.pdb 48 DFITKQDAKKAFNALCHSTHLYGRRLVLEW 77 usage_00017.pdb 47 RFTEYETQVKVMSQ---RHMIDGRWCDCKL 73 usage_00030.pdb 48 TFMDQAGVDKVLAQ--SRHELDSKTIDPKV 75 usage_00048.pdb 45 VFDSIESAKKFVET--PGQKYKETDLLILF 72 usage_00060.pdb 48 TFDDHDSVDKIVIQ--KYHTVNGHNCEVRK 75 usage_00087.pdb 47 TFKEEEPVKKIMEK--KYHNVGLSKCEIKV 74 usage_00093.pdb 48 EFAERNSVDAAVAM--DETVFRGRTIKVLP 75 usage_00102.pdb 48 TYATVEEVDAAMNA--RPHKVDGRVVEPKR 75 usage_00108.pdb 46 TFESEDIVEKVCEI--HFHEINNKMVECKK 73 usage_00114.pdb 49 HFERRADALKAMKQ-YKGVPLDGRPMDIQL 77 usage_00184.pdb 45 TFREPADAERVLAQ--ADHELHGAQLSLRP 72 usage_00213.pdb 48 LFKESESVDKVDQK---EHKLNGKVIDPKR 74 f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################