################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:49 2021 # Report_file: c_0378_37.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00117.pdb # 5: usage_00413.pdb # 6: usage_00524.pdb # 7: usage_00525.pdb # 8: usage_00526.pdb # 9: usage_00527.pdb # 10: usage_00757.pdb # 11: usage_01056.pdb # # Length: 111 # Identity: 19/111 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/111 ( 28.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/111 ( 25.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 ----GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 53 usage_00044.pdb 1 ----GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 53 usage_00045.pdb 1 ----GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 53 usage_00117.pdb 1 ----GKILVSL-YSTQQGGLIVGIIRCVHLAAD-ANGYSDPFVKLWLKPD---K-AKHKT 50 usage_00413.pdb 1 ----GELLVSLCYQSTTNTLTVVVLKARHLP-------SDPYVKVNLYH-AKKRISKKKT 48 usage_00524.pdb 1 --KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 55 usage_00525.pdb 1 ----GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 53 usage_00526.pdb 1 ----GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 53 usage_00527.pdb 1 SEKLGDICFSLAYVPTAGKLTVVILAAKNLKKMDVGGLSDPYVKIHLMQ-NGKRLKKKKT 59 usage_00757.pdb 1 ----GQLQYSLDYDFQSGQLLVGILQAMGLAALDLGGSSDPYVRVYLLP---DKRRRYET 53 usage_01056.pdb 1 --KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKKKKFET 55 G SL Y L V i a L SDPyVk L k T usage_00043.pdb 54 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 104 usage_00044.pdb 54 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 104 usage_00045.pdb 54 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 104 usage_00117.pdb 51 QIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLG 101 usage_00413.pdb 49 HV------AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIG----- 88 usage_00524.pdb 56 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 106 usage_00525.pdb 54 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 104 usage_00526.pdb 54 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 104 usage_00527.pdb 60 TIKKNTLNPWYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVG 110 usage_00757.pdb 54 KVHRQTLNPHFGETFAFKVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVP 104 usage_01056.pdb 56 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVP 106 p fnE F f p l V D d d IG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################