################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:32 2021 # Report_file: c_1266_92.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00177.pdb # 2: usage_00296.pdb # 3: usage_00373.pdb # 4: usage_00653.pdb # 5: usage_00654.pdb # 6: usage_01276.pdb # # Length: 70 # Identity: 3/ 70 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 70 ( 12.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 70 ( 45.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00177.pdb 1 PVRVRVDVRFRDLDPLGHVNNAVFLSYELARIRYFQRIS---P-D-----------WLEE 45 usage_00296.pdb 1 -HDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDT-G-F----------------- 40 usage_00373.pdb 1 -ARVPISVRWRDMDSMGHVNNAKYISYLEEARVRWMLGV-EGVA-MT--DRIAPVV---- 51 usage_00653.pdb 1 -HKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLREL-D-I-KMT--GQTGPVV---- 50 usage_00654.pdb 1 IHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLREL-D-I-KMT--GQTGPVV---- 51 usage_01276.pdb 1 -FIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKL----E--VVLLNAYCE---- 49 d D G V a y y r r usage_00177.pdb 46 GHFVV----- 50 usage_00296.pdb 41 -----EKLFF 45 usage_00373.pdb ---------- usage_00653.pdb ---------- usage_00654.pdb ---------- usage_01276.pdb ---------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################