################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:25 2021 # Report_file: c_0721_119.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00406.pdb # 2: usage_00514.pdb # 3: usage_00518.pdb # # Length: 74 # Identity: 14/ 74 ( 18.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 74 ( 60.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 74 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00406.pdb 1 RVGHIG-------------------LYYIKLPPDIAERRAFLLDP-LATGGSASLALSLL 40 usage_00514.pdb 1 PVGEIDITLYRDDLTVTS-N-KEPLVKGTDIPVDITDKKVILVDDVLYTGRTVRAGMDAL 58 usage_00518.pdb 1 TVGEIDITLYRDDLSKK-TSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDAL 59 VGeId vkg diPvDItd kviLvDd LyTGrtvragmdaL usage_00406.pdb 41 KERGATGVKL-AI- 52 usage_00514.pdb 59 MDLGRPSQIQLA-V 71 usage_00518.pdb 60 VDVGRPSSIQLA-V 72 d Grps iq A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################