################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:06 2021 # Report_file: c_0923_138.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00171.pdb # 2: usage_00172.pdb # 3: usage_00200.pdb # 4: usage_00400.pdb # 5: usage_00443.pdb # 6: usage_00669.pdb # 7: usage_00672.pdb # 8: usage_00757.pdb # 9: usage_00763.pdb # 10: usage_00768.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 38 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 38 ( 42.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 -SKA--LGDS-AVT---YGAASTAQKDG--VAI---G- 25 usage_00172.pdb 1 -AST---SDT-GVA---VGFNSKADAKN--SVA---IG 25 usage_00200.pdb 1 -AFR--ASTTSSGK---IHSEGFIMGSTSGCEA----- 27 usage_00400.pdb 1 -AIVANGADS-SVA---LGHNTKVNGKQ--SIA---IG 28 usage_00443.pdb 1 -AFV---DNT-ATYGTAAGNRAK-VDKD--ATEGTALG 30 usage_00669.pdb 1 DNKA--NADN-AVA---LGNKNTIEGEN--SVA---IG 27 usage_00672.pdb 1 NAVA--LGNK-NTI---EGENSVAIGSN--NTV---K- 26 usage_00757.pdb 1 DNKA--NADN-AVA---LGNKNTIEGEN--SVA---IG 27 usage_00763.pdb 1 NAVA--LGNK-NTI---EGENSVAIGSN--NTV---K- 26 usage_00768.pdb 1 DNKA--NADN-AVA---LGNKNTIEGEN--SVA---IG 27 g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################