################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:34 2021 # Report_file: c_0545_151.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00207.pdb # 2: usage_00448.pdb # 3: usage_00811.pdb # 4: usage_00882.pdb # # Length: 130 # Identity: 37/130 ( 28.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/130 ( 41.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/130 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00207.pdb 1 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIA 60 usage_00448.pdb 1 ---LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALK 57 usage_00811.pdb 1 -PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALD 59 usage_00882.pdb 1 --MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIA 58 A e G EyF K D P A k YtE iKR PedA YSNRAA l KLm F A usage_00207.pdb 61 DCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD--AEVNNGSS-AREIDQ 117 usage_00448.pdb 58 DCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS---------CKEAAD 108 usage_00811.pdb 60 DCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD--P-------SNEEARE 110 usage_00882.pdb 59 DCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD--AEVNNGSS-AREIDQ 115 DC I dp F YiRKA a A key A A D E usage_00207.pdb 118 LYYKASQ--- 124 usage_00448.pdb 109 GYQRCMMAQY 118 usage_00811.pdb 111 GVRNC----- 115 usage_00882.pdb 116 LYYKASQQR- 124 y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################