################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:41:56 2021 # Report_file: c_1172_202.html ################################################################################################ #==================================== # Aligned_structures: 59 # 1: usage_00119.pdb # 2: usage_00220.pdb # 3: usage_00473.pdb # 4: usage_00516.pdb # 5: usage_00626.pdb # 6: usage_00627.pdb # 7: usage_00629.pdb # 8: usage_00631.pdb # 9: usage_00958.pdb # 10: usage_00959.pdb # 11: usage_01104.pdb # 12: usage_01145.pdb # 13: usage_01146.pdb # 14: usage_01183.pdb # 15: usage_01518.pdb # 16: usage_01887.pdb # 17: usage_02055.pdb # 18: usage_02105.pdb # 19: usage_02106.pdb # 20: usage_02206.pdb # 21: usage_02207.pdb # 22: usage_02208.pdb # 23: usage_02209.pdb # 24: usage_02213.pdb # 25: usage_02214.pdb # 26: usage_02215.pdb # 27: usage_02216.pdb # 28: usage_02217.pdb # 29: usage_02218.pdb # 30: usage_02219.pdb # 31: usage_02220.pdb # 32: usage_02221.pdb # 33: usage_02222.pdb # 34: usage_02223.pdb # 35: usage_02225.pdb # 36: usage_02226.pdb # 37: usage_02229.pdb # 38: usage_02230.pdb # 39: usage_02231.pdb # 40: usage_02524.pdb # 41: usage_02886.pdb # 42: usage_03227.pdb # 43: usage_03228.pdb # 44: usage_03290.pdb # 45: usage_03291.pdb # 46: usage_03292.pdb # 47: usage_03293.pdb # 48: usage_03300.pdb # 49: usage_03301.pdb # 50: usage_03327.pdb # 51: usage_03623.pdb # 52: usage_04444.pdb # 53: usage_04445.pdb # 54: usage_04446.pdb # 55: usage_04649.pdb # 56: usage_04972.pdb # 57: usage_04984.pdb # 58: usage_04985.pdb # 59: usage_05061.pdb # # Length: 31 # Identity: 2/ 31 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 31 ( 61.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 31 ( 19.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_00220.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_00473.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_00516.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_00626.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_00627.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_00629.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_00631.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_00958.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_00959.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_01104.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_01145.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_01146.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_01183.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_01518.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_01887.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02055.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02105.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_02106.pdb 1 ETTALVCDNGSGLVKAGFAGDD--APRAVFP 29 usage_02206.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02207.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02208.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02209.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02213.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02214.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02215.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02216.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02217.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02218.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02219.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02220.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02221.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02222.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02223.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02225.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02226.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02229.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_02230.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02231.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_02524.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_02886.pdb 1 ETTALVCDNGSGLVKAGFAGDD--APRAVFP 29 usage_03227.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_03228.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_03290.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_03291.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_03292.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_03293.pdb 1 ---ALVCDNGSGLVKAGFAGDD--APRAVFP 26 usage_03300.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_03301.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_03327.pdb 1 ETTALVCDNGSGLVKAGFAGDD--APRAVFP 29 usage_03623.pdb 1 -SIALVVDNGSGMVKSGLAGDD--APKCVFP 28 usage_04444.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_04445.pdb 1 ----LVCDNGSGLVKAGFAGDD--APRAVFP 25 usage_04446.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_04649.pdb 1 ---LVGIACDRHMLVVHYKNLPASAPLFTLM 28 usage_04972.pdb 1 -TTALVCDNGSGLVKAGFAGDD--APRAVFP 28 usage_04984.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_04985.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 usage_05061.pdb 1 --TALVCDNGSGLVKAGFAGDD--APRAVFP 27 lv dngsg vk g agdd AP vfp #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################