################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:44 2021 # Report_file: c_0892_6.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00036.pdb # 2: usage_00102.pdb # 3: usage_00103.pdb # 4: usage_00111.pdb # 5: usage_00112.pdb # 6: usage_00114.pdb # 7: usage_00115.pdb # 8: usage_00118.pdb # 9: usage_00119.pdb # 10: usage_00189.pdb # 11: usage_00190.pdb # 12: usage_00210.pdb # 13: usage_00211.pdb # # Length: 100 # Identity: 28/100 ( 28.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/100 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/100 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 SELEKAVVALIDVFHQYSG--REGDKHKLKKSELKELINNELSHF-LEEIKE-QEVVDKV 56 usage_00102.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 usage_00103.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 usage_00111.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 usage_00112.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 usage_00114.pdb 1 -ELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 55 usage_00115.pdb 1 -ELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 55 usage_00118.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELS-GFLDA----QKDVDAV 53 usage_00119.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELS-GFLDA----QKDVDAV 53 usage_00189.pdb 1 -ELEAAMGMIIDVFSRYSGSE--GSTQTLTKGELKVLMEKELPGFLQ-S-GKDKDAVDKL 55 usage_00190.pdb 1 SELEKAVVALIDVFHQYSG--REGDKHKLKKSELKELINNELSHFLEEI-KE-QEVVDKV 56 usage_00210.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 usage_00211.pdb 1 SELETAMETLINVFHAHSG--KEGDKYKLSKKELKELLQTELSGFLDAQ-KD-VDAVDKV 56 ELE A lI VFh SG Gdk kL K ELKeL ELs VD v usage_00036.pdb 57 METLDSDG---DGECDFQEFMAFVAMITTAC--------- 84 usage_00102.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFW--E- 90 usage_00103.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFW--E- 90 usage_00111.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVAM--------- 84 usage_00112.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVAMNNFFW--EN 91 usage_00114.pdb 56 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFWENS- 91 usage_00115.pdb 56 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFWENS- 91 usage_00118.pdb 54 DKVMKELDENGDGEVDFQEYVVLVAALTVAMNNFFWENS- 92 usage_00119.pdb 54 DKVMKELDENGDGEVDFQEYVVLVAALTVAMNNFFWENS- 92 usage_00189.pdb 56 LKDLDANG---DAQVDFSEFIVFVAAITSASHK------- 85 usage_00190.pdb 57 METLDSDG---DGECDFQEFMAFVAMITTACHEFFE---- 89 usage_00210.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFW---- 89 usage_00211.pdb 57 MKELDENG---DGEVDFQEYVVLVAALTVACNNFFW---- 89 Dge DFqE VA T A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################