################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:02 2021 # Report_file: c_1334_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00343.pdb # 2: usage_00344.pdb # 3: usage_00404.pdb # 4: usage_00405.pdb # 5: usage_00406.pdb # 6: usage_00407.pdb # 7: usage_00465.pdb # # Length: 49 # Identity: 35/ 49 ( 71.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 49 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 49 ( 10.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00343.pdb 1 -SSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNK 48 usage_00344.pdb 1 -SSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNK 48 usage_00404.pdb 1 -SIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNK 48 usage_00405.pdb 1 -SIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNK 48 usage_00406.pdb 1 YSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLA---- 45 usage_00407.pdb 1 YSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLA---- 45 usage_00465.pdb 1 -SIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYN- 47 S Y YKVLKQ HPDTGIS K M I NSFVNDIFERIA EAS LA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################