################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:45 2021 # Report_file: c_0296_17.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00052.pdb # 2: usage_00215.pdb # 3: usage_00274.pdb # 4: usage_00303.pdb # 5: usage_00304.pdb # # Length: 134 # Identity: 5/134 ( 3.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/134 ( 9.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/134 ( 37.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 -QIGFIGCGNGA----IG-GINKNIVSSN-QIICSDLNTANLKNASEKY----------- 42 usage_00215.pdb 1 -KVFVIGAGL--GRGIAIAIAS-K-----HEVVLQDVSEKALEAAREQIP---------- 41 usage_00274.pdb 1 -KLGYIGLGNM-GAPMATRMTEWP-----GGVTVYDIRIEAMTPLAEA------------ 41 usage_00303.pdb 1 RNIAIIGLGTM-GPGMAARLARGG-----LQVVAYDVAPAAIERARSMLSVAETVLDALG 54 usage_00304.pdb 1 RNIAIIGLGTM-GPGMAARLARGG-----LQVVAYDVAPAAIERARSMLSVAETVLDALG 54 IG G a v D a a usage_00052.pdb 43 ----------GLTTTTDNNEVAKNADILILSIKPD--LYASII---KEIIKNDAIIVTIA 87 usage_00215.pdb 42 ----EELLS-KIEFTTT-LEKVKDCDIV-EAVFEDLNTKVEVLREVERLTN--APLCSNT 92 usage_00274.pdb 42 ----------GATLADSVADVA-AADLIHI-TVLDDAQVREVVGELAGHAKPGTVIAIHS 89 usage_00303.pdb 55 IALPSAG-VGTVRFTDDIGDAVSGADLVIENVPENISIKADVYRTIDGLIGQDTIVASDT 113 usage_00304.pdb 55 IALPSAG-VGTVRFTDDIGDAVSGADLVIENVPENISIKADVYRTIDGLIGQDTIVASDT 113 t aD v usage_00052.pdb 88 AGKS--IESTENAF 99 usage_00215.pdb 93 SVIS--VDDIAERL 104 usage_00274.pdb 90 TISDTTAVELARDL 103 usage_00303.pdb 114 SGIP--ITKLQAHI 125 usage_00304.pdb 114 SGIP--ITKLQAHI 125 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################