################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:08 2021 # Report_file: c_1484_229.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00676.pdb # 2: usage_01211.pdb # 3: usage_01213.pdb # 4: usage_01781.pdb # 5: usage_01876.pdb # 6: usage_03056.pdb # 7: usage_03539.pdb # 8: usage_04748.pdb # # Length: 46 # Identity: 1/ 46 ( 2.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 46 ( 6.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 46 ( 52.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00676.pdb 1 -----FEQMARQA-K--------SEQEKDAVYSKALTEATRKA--- 29 usage_01211.pdb 1 --VYRELQKLS--KF--------DEQRTATYITELANALSYCHSKR 34 usage_01213.pdb 1 --VYRELQKLS--KF--------DEQRTATYITELANALSYCHSKR 34 usage_01781.pdb 1 ---YRELQKLS--KF--------DEQRTATYITELANALSYCHSKR 33 usage_01876.pdb 1 --VYRELQKLS--KF--------DEQRTATYITELANALSYCHSKR 34 usage_03056.pdb 1 --LYKELQKHG--RF--------DEQRSATFMEELADALHYCHERK 34 usage_03539.pdb 1 --VYRELQKLS--KF--------DEQRTATYITELANALSYCHSKR 34 usage_04748.pdb 1 STEDLLVNAIR----KVDREGRFETQLANLQRYIERRRR------- 35 q eQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################