################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:08 2021 # Report_file: c_0994_107.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00059.pdb # 2: usage_00239.pdb # 3: usage_00309.pdb # 4: usage_00375.pdb # 5: usage_00512.pdb # 6: usage_00614.pdb # 7: usage_00877.pdb # 8: usage_00914.pdb # 9: usage_01121.pdb # 10: usage_01122.pdb # # Length: 41 # Identity: 2/ 41 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 41 ( 12.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 41 ( 17.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00059.pdb 1 ---VNFNAPAQVVIAGTKAGIEKACEIAKEKGAKRALP--- 35 usage_00239.pdb 1 ---VNFNSPGQVVIAGQKDAVERAGVLCKEAGAKRALP--- 35 usage_00309.pdb 1 ---VNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPL-- 36 usage_00375.pdb 1 ---ASVNGPRSVVVAGESGPLDELIAECEAEAHKARR---- 34 usage_00512.pdb 1 GVVPAHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKE---- 37 usage_00614.pdb 1 ---ANFNSPGQIVIGGDAAAVDRALALLAERGVRKAVK--- 35 usage_00877.pdb 1 ---ANYNSPGQIVISGELVALEKAMEFIKEVGGRAIK---- 34 usage_00914.pdb 1 ---ANFNSPGQIVIGGDAAAVDRALALLAERGVRKAVK--- 35 usage_01121.pdb 1 ---ANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPV 38 usage_01122.pdb 1 ---ANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLP- 37 N vi G g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################