################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:42 2021 # Report_file: c_1476_62.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00676.pdb # 2: usage_00677.pdb # 3: usage_00678.pdb # 4: usage_00731.pdb # 5: usage_02426.pdb # 6: usage_02427.pdb # 7: usage_02428.pdb # 8: usage_02429.pdb # 9: usage_02430.pdb # 10: usage_02681.pdb # 11: usage_03019.pdb # 12: usage_03020.pdb # 13: usage_03039.pdb # # Length: 34 # Identity: 4/ 34 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 34 ( 38.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 34 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00676.pdb 1 ---LSEGLLYERRLFHSAFATEDQSEGMAAFIE- 30 usage_00677.pdb 1 --SLSEGLLYERRLFHSAFATEDQSEGMAAFIE- 31 usage_00678.pdb 1 ---LSEGLLYERRLFHSAFATEDQSEGMAAFIEK 31 usage_00731.pdb 1 ---PQTGLLMESLMATVAQSDQEAKTRIRAFLDH 31 usage_02426.pdb 1 --SLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 32 usage_02427.pdb 1 ---LSEGLLYERRLFHSAFATEDQSEGMAAFIE- 30 usage_02428.pdb 1 --SLSEGLLYERRLFHSAFATEDQSEGMAAFIEK 32 usage_02429.pdb 1 ---LSEGLLYERRLFHSAFATEDQSEGMAAFIEK 31 usage_02430.pdb 1 ---LSEGLLYERRLFHSAFATEDQSEGMAAFIEK 31 usage_02681.pdb 1 ---LYEGMQFERKNFYLLFASEDQKEGMAAFLEK 31 usage_03019.pdb 1 SSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEK 34 usage_03020.pdb 1 SSHYYEGVQREAQIFGEVFTSEDGREGVAAFLE- 33 usage_03039.pdb 1 --SLSEGLLYERRLFHSAFATEDQSEGMAAFIE- 31 eG E f f ed eg aAF e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################