################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:00 2021 # Report_file: c_1297_193.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00340.pdb # 2: usage_00386.pdb # 3: usage_00420.pdb # 4: usage_00421.pdb # 5: usage_01123.pdb # 6: usage_01440.pdb # 7: usage_01471.pdb # 8: usage_01602.pdb # 9: usage_01603.pdb # 10: usage_01620.pdb # 11: usage_01621.pdb # 12: usage_01622.pdb # 13: usage_01669.pdb # 14: usage_02083.pdb # 15: usage_02084.pdb # 16: usage_02090.pdb # 17: usage_03107.pdb # 18: usage_03240.pdb # # Length: 59 # Identity: 8/ 59 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 59 ( 25.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 59 ( 25.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00340.pdb 1 SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL-AIEVE- 57 usage_00386.pdb 1 -EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV--PRIKIIDFGLAHKID- 55 usage_00420.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_00421.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 56 usage_01123.pdb 1 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL-AE---- 54 usage_01440.pdb 1 TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 57 usage_01471.pdb 1 --------LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-- 49 usage_01602.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 51 usage_01603.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 51 usage_01620.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_01621.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_01622.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_01669.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 49 usage_02083.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_02084.pdb 1 -EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 58 usage_02090.pdb 1 --------LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 49 usage_03107.pdb 1 --------LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-- 49 usage_03240.pdb 1 -EAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV-AIQLGE 57 Qil y H H dlKPEN l p A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################