################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:47 2021 # Report_file: c_0363_26.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00125.pdb # 2: usage_00126.pdb # 3: usage_00349.pdb # 4: usage_00350.pdb # 5: usage_00351.pdb # 6: usage_00352.pdb # 7: usage_00353.pdb # 8: usage_00472.pdb # 9: usage_00473.pdb # 10: usage_00474.pdb # 11: usage_00475.pdb # 12: usage_00510.pdb # 13: usage_00511.pdb # # Length: 139 # Identity: 84/139 ( 60.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/139 ( 60.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/139 ( 30.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 -VKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLL 59 usage_00126.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKD-----ADSEESPAIEAIHLLRKTFPNLL 55 usage_00349.pdb 1 GVNQ-LEELRPLVEAGLRCVLIFGVPSR------------EDSPTIEAVRLLRKTFPSLL 47 usage_00350.pdb 1 GVNQ-LEELRPLVEAGLRCVLIFGVP-------------SEDSPTIEAVRLLRKTFPSLL 46 usage_00351.pdb 1 ----LEEMLRPLVEAGLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPSLL 56 usage_00352.pdb 1 GVNQLEEMLRPLVEAGLRCVLIFGVPSR----------DSEDSPTIEAVRLLRKTFPSLL 50 usage_00353.pdb 1 -VNQLEEMLRPLVEAGLRCVLIFGVPSR-----------SEDSPTIEAVRLLRKTFPSLL 48 usage_00472.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLL 60 usage_00473.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLL 60 usage_00474.pdb 1 -VKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLL 59 usage_00475.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVPSRVPK------ADSEESPAIEAIHLLRKTFPNLL 54 usage_00510.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVP--------------EESPAIEAIHLLRKTFPNLL 46 usage_00511.pdb 1 GVKRLEEMLRPLVEEGLRCVLIFGVP--------------EESPAIEAIHLLRKTFPNLL 46 E LRPLVE GLRCVLIFGVP E SP IEA LLRKTFP LL usage_00125.pdb 60 VACDVCLCPYTSHGHCGLLS--GAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 117 usage_00126.pdb 56 VACDVCLCPY----------------AEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 99 usage_00349.pdb 48 VACDVCL------------------LSEESRQRLAEVALAYAKAGCQVVAPSD--DGRVE 87 usage_00350.pdb 47 VACDVCL-------------------SEESRQRLAEVALAYAKAGCQVVAPSD--DGRVE 85 usage_00351.pdb 57 VACDVCLC--PY-TSHGHCG-LLSELSEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 112 usage_00352.pdb 51 VACDVCL------------------LSEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 92 usage_00353.pdb 49 VACDVCL------------------LSEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 90 usage_00472.pdb 61 VACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 120 usage_00473.pdb 61 VACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 120 usage_00474.pdb 60 VACDVCLCPYTSHGHCGLLS--GAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 117 usage_00475.pdb 55 VACDVCLCPY----------------AEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVE 98 usage_00510.pdb 47 VACDVCLC---------------AFRAEESRQRLAEVALAYAKAGCQVVAPSD--DGRVE 89 usage_00511.pdb 47 VACDVC-----------------AFRAEESRQRLAEVALAYAKAGCQVVAPSD--DGRVE 87 VACDVC EESRQRLAEVALAYAKAGCQVVAPSD DGRVE usage_00125.pdb 118 AIKEALMAHGLGNRVSVMS 136 usage_00126.pdb 100 AIKEALMAHGLGNRVSVMS 118 usage_00349.pdb 88 AIKAALLKHGLGNRVSVS- 105 usage_00350.pdb 86 AIKAALLKHGLGNRVSVS- 103 usage_00351.pdb 113 AIKAALLKHGLGNRVSVMS 131 usage_00352.pdb 93 AIKAALLKHGLGNRVSVMS 111 usage_00353.pdb 91 AIKAALLKHGLGNRVSVMS 109 usage_00472.pdb 121 AIKEALMAHGLGNRVSVMS 139 usage_00473.pdb 121 AIKEALMAHGLGNRVSVMS 139 usage_00474.pdb 118 AIKEALMAHGLGNRVSVMS 136 usage_00475.pdb 99 AIKEALMAHGLGNRVSVMS 117 usage_00510.pdb 90 AIKEALMAHGLGNRVSVMS 108 usage_00511.pdb 88 AIKEALMAHGLGNRVSVMS 106 AIK AL HGLGNRVSV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################