################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:03 2021 # Report_file: c_1095_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00042.pdb # 2: usage_00193.pdb # 3: usage_00194.pdb # 4: usage_00286.pdb # 5: usage_00306.pdb # 6: usage_00381.pdb # 7: usage_00544.pdb # 8: usage_00720.pdb # 9: usage_00722.pdb # # Length: 83 # Identity: 25/ 83 ( 30.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 83 ( 43.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 83 ( 9.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 60 usage_00193.pdb 1 --AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 58 usage_00194.pdb 1 --AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 58 usage_00286.pdb 1 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 60 usage_00306.pdb 1 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 60 usage_00381.pdb 1 TRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRLLRR 60 usage_00544.pdb 1 TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSTEAISIMRRLLRR 60 usage_00720.pdb 1 --AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 58 usage_00722.pdb 1 ----DWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTK 56 DWWglGV YEM G PF D e F I e r Pr LS EA s Ll usage_00042.pdb 61 DPKQRLGGGPSDAKEVMEH---- 79 usage_00193.pdb 59 DPKQRLGGGPSDAKEVMEH---- 77 usage_00194.pdb 59 DPKQRLGGGPSDAKEVMEH---- 77 usage_00286.pdb 61 DPKQRLGGGPSDAKEVMEH---- 79 usage_00306.pdb 61 DPKQRLGGGPSDAKEVMEH---- 79 usage_00381.pdb 61 NPERRLGSSERDAEDVKKQ---- 79 usage_00544.pdb 61 NPERRLGASEKDAEDVKKH---- 79 usage_00720.pdb 59 DPKQRLGGGPSDAKEVMEH---- 77 usage_00722.pdb 57 HPAKRLGCGPEGERDVREHAFFR 79 P RLG da V h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################