################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:24 2021 # Report_file: c_1434_127.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00076.pdb # 2: usage_00896.pdb # 3: usage_00897.pdb # 4: usage_03217.pdb # 5: usage_03218.pdb # 6: usage_03219.pdb # 7: usage_03220.pdb # # Length: 124 # Identity: 11/124 ( 8.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/124 ( 51.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/124 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 ----HQFFRDMDDEESWIKEKKLLVSSEDYGRDL--TGVQNLRKKHKRLEAELAAHEPAI 54 usage_00896.pdb 1 -MDLDSYQIALEEVLTWLLSAEDTFQEQD-DISDDVEDVKEQFATHETFMMELSAHQSSV 58 usage_00897.pdb 1 ---LDSYQIALEEVLTWLLSAEDTFQEQD-DISDDVEDVKEQFATHETFMMELSAHQSSV 56 usage_03217.pdb 1 --DLDSYQIALEEVLTWLLSAEDTFQEQD-DISDDVEDVKEQFATHETFMMELSAHQSSV 57 usage_03218.pdb 1 ---LDSYQIALEEVLTWLLSAEDTFQEQD-DISDDVEDVKEQFATHETFMMELSAHQSSV 56 usage_03219.pdb 1 EVNLDRYQTALEEVLSWLLSAEDTLQAQG-EISNDVEVVKDQFHTHEGYMMDLTAHQGRV 59 usage_03220.pdb 1 ---LDRYQTALEEVLSWLLSAEDTLQAQG-EISNDVEVVKDQFHTHEGYMMDLTAHQGRV 56 d yq aleevl Wllsaedt q q is e Vk qf tHe mm L AHq v usage_00076.pdb 55 QGVLDTGKKLSDDN----------TIGKEEIQQRLAQFVDHWKELKQLAAARGQ------ 98 usage_00896.pdb 59 GSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQKKQ 118 usage_00897.pdb 57 GSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQKKQ 116 usage_03217.pdb 58 GSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQK-- 115 usage_03218.pdb 57 GSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQK-- 114 usage_03219.pdb 60 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMD----- 114 usage_03220.pdb 57 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDL---- 112 g Lq G L g qeqm lln Rwe lrv smE qs lh lm usage_00076.pdb ---- usage_00896.pdb 119 LQQL 122 usage_00897.pdb 117 LQQL 120 usage_03217.pdb ---- usage_03218.pdb ---- usage_03219.pdb ---- usage_03220.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################