################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:03 2021 # Report_file: c_0894_8.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00049.pdb # 2: usage_00123.pdb # 3: usage_00126.pdb # 4: usage_00131.pdb # 5: usage_00401.pdb # 6: usage_00402.pdb # 7: usage_00443.pdb # 8: usage_00451.pdb # 9: usage_00452.pdb # 10: usage_00453.pdb # # Length: 103 # Identity: 21/103 ( 20.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/103 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/103 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 -------------ARAGLEAARAFANNGKKWAEAAANHVYQKFPYTTQMQGPQYASTPEG 47 usage_00123.pdb 1 STEIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQRG 60 usage_00126.pdb 1 NTELQAANGRFQRATASMEAARALTSNADSLVKGAVQEVYNKFPYLTQP-G-QMGYGDTN 58 usage_00131.pdb 1 --EIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQRG 58 usage_00401.pdb 1 -------------AAARLEAAEKLGSNHEAVVKEAGDACFSKYGYNKNP-G-EAGENQEK 45 usage_00402.pdb 1 ------------RAAARLEAAEKLGSNHEAVVKEAGDACFSKYGYNKNP-G-EAGENQEK 46 usage_00443.pdb 1 NTELQVVNGRYNRATSSLEAAKALTANADRLISGAANAVYSKFPYTTQMPGPNYSSTAIG 60 usage_00451.pdb 1 ----------------GLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQRG 44 usage_00452.pdb 1 STEIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQRG 60 usage_00453.pdb 1 STEIQVAFGRFRQAKAGLEAAKALTSKADSLISGAAQAVYNKFPYTTQMQGPNYAADQRG 60 lEAA l A K Y G usage_00049.pdb 48 KAKCVRDIDHYLRTISYCCVVGGTGPLDDYVVAGL-------- 82 usage_00123.pdb 61 KDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGIDEINRTF- 102 usage_00126.pdb 59 QAKCARDISHYLRFITYSLVAGGTGPLD--------------- 86 usage_00131.pdb 59 KDKCARDIGYYLRMVTYCLIAGGTGPMDEY------------- 88 usage_00401.pdb 46 INKCYRDIDHYMRLINYTLVVGGTGPLDEWG------------ 76 usage_00402.pdb 47 INKCYRDIDHYMRLINYTLVVGGTGPLDEWGIAGAREVYRTLN 89 usage_00443.pdb 61 KAKCARDIGYYLRMVTYCLVVGGTGPMDDYL------------ 91 usage_00451.pdb 45 KDKCARDIGYYLRMVTYCLIAGGTGPMDEYLIAGI-------- 79 usage_00452.pdb 61 KDKCARDIGYYLRMVTYCLIAGGTGPMDEY------------- 90 usage_00453.pdb 61 KDKCARDIGYYLRMVTYCLIAGGTGPMDEY------------- 90 KC RDI Y R Y l GGTGP D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################