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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:02:37 2021
# Report_file: c_0233_9.html
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#====================================
# Aligned_structures: 9
#   1: usage_00009.pdb
#   2: usage_00010.pdb
#   3: usage_00016.pdb
#   4: usage_00020.pdb
#   5: usage_00021.pdb
#   6: usage_00022.pdb
#   7: usage_00121.pdb
#   8: usage_00126.pdb
#   9: usage_00129.pdb
#
# Length:        186
# Identity:       45/186 ( 24.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     69/186 ( 37.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           51/186 ( 27.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00009.pdb         1  DYLFKLLLIGNSGVGKSCLLLRFSD-DTYT---NDYIST---IGVDFKIKTVELDGKTVK   53
usage_00010.pdb         1  DYLFKLLLIGDSGVGKNCLLLRFAD-DTYT---ESYIST---IGVDFKIRTIELDGKTIK   53
usage_00016.pdb         1  DYLFKLLLIGDSGVGKSCLLLRFAD-DTYT---ESYIST---IGVDFKIRTIELDGKTIK   53
usage_00020.pdb         1  -YLFKLLLIGDSGVGKSCLLLRFAD-DTYT---DSYISTIGV---DFKIRTISLENKTVK   52
usage_00021.pdb         1  DHLFKLLIIGDSGVGKSSLLLRFADNT--SYIT-----T---IGVDFKIRTVEINGEKVK   50
usage_00022.pdb         1  DHLFKLLIIGDSGVGKSSLLLRFADNTFGSYIT-----T---IGVDFKIRTVEINGEKVK   52
usage_00121.pdb         1  DYLFKLLLIGNSGVGKSCLLLRFSD-DTYT---NDYIST---IGVDFKIKTVELDGKTVK   53
usage_00126.pdb         1  ----KLLLIGNSGVGKSCLLLRFSD-DTYT---NDYIST---IGVDFKIKTVELDGKTVK   49
usage_00129.pdb         1  -RIFKIIVIGDSNVGKTCLTYRFCA-GRFP---DRTEAT---IGVDFRERAVDIDGERIK   52
                               Kll IG SgVGK  LllRF d             T      DFki t    g   K

usage_00009.pdb        54  LQIWDT--AGQERFRTI-TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA-TSTV  109
usage_00010.pdb        54  LQIWDT--AGQERFRTI-TSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SENV  109
usage_00016.pdb        54  LQIWDT--AGQERFRTI-TSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SENV  109
usage_00020.pdb        53  LQIWDTAG------------SYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYA-MENV   99
usage_00021.pdb        51  LQIWDT--AGQERFRTI-TSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDV  105
usage_00022.pdb        53  LQIWDT--AGQERFRTI-TSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDV  107
usage_00121.pdb        54  LQIWDT--AGQERFRTI-TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA-TSTV  109
usage_00126.pdb        50  LQIWDT--AGQERFRTI-TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA-TSTV  105
usage_00129.pdb        53  IQLWDT--AGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDI  110
                           lQiWDT               YYRg Hg i VYDvT   SF  vk W  Ei        v

usage_00009.pdb       110  LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALD-S--TNVEDAFLTMARQIKE  166
usage_00010.pdb       110  NKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKN-A--TNVEQSFMTMAAEIKK  166
usage_00016.pdb       110  NKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKN-A--TNVEQSFMTMAAEIKK  166
usage_00020.pdb       100  NKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKN-A--YNVEQAFHTMAGEIKK  156
usage_00021.pdb       106  CRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKE-N--VNVEEMFNCITELVLR  162
usage_00022.pdb       108  CRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKE-N--VNVEEMFNCITELVLR  164
usage_00121.pdb       110  LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALD-S--TNVEDAFLTMARQIK-  165
usage_00126.pdb       106  LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALD-S--TNVEDAFLTMARQIKE  162
usage_00129.pdb       111  PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA-----  165
                              LVGNK D     vV    a  fA        ETSA       nVE  F         

usage_00009.pdb       167  SM----  168
usage_00010.pdb       167  RM----  168
usage_00016.pdb       167  RM----  168
usage_00020.pdb       157  RVQ---  159
usage_00021.pdb       163  AKKDNL  168
usage_00022.pdb       165  AKKDNL  170
usage_00121.pdb            ------     
usage_00126.pdb       163  S-----  163
usage_00129.pdb            ------     
                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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