################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:07:27 2021 # Report_file: c_1429_15.html ################################################################################################ #==================================== # Aligned_structures: 37 # 1: usage_00235.pdb # 2: usage_00237.pdb # 3: usage_00378.pdb # 4: usage_00380.pdb # 5: usage_00382.pdb # 6: usage_00384.pdb # 7: usage_00390.pdb # 8: usage_00392.pdb # 9: usage_00409.pdb # 10: usage_00411.pdb # 11: usage_00412.pdb # 12: usage_00414.pdb # 13: usage_00416.pdb # 14: usage_00418.pdb # 15: usage_00419.pdb # 16: usage_00421.pdb # 17: usage_00423.pdb # 18: usage_00476.pdb # 19: usage_00637.pdb # 20: usage_00641.pdb # 21: usage_00690.pdb # 22: usage_00692.pdb # 23: usage_00694.pdb # 24: usage_00696.pdb # 25: usage_00708.pdb # 26: usage_00711.pdb # 27: usage_00713.pdb # 28: usage_00715.pdb # 29: usage_00716.pdb # 30: usage_00740.pdb # 31: usage_00742.pdb # 32: usage_00744.pdb # 33: usage_00746.pdb # 34: usage_01189.pdb # 35: usage_01512.pdb # 36: usage_01514.pdb # 37: usage_01598.pdb # # Length: 67 # Identity: 17/ 67 ( 25.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 67 ( 34.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 67 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00235.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00237.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00378.pdb 1 --------------------WHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMVSQDL 40 usage_00380.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMVSQD- 59 usage_00382.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMV---- 56 usage_00384.pdb 1 ---QFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMVSQD- 56 usage_00390.pdb 1 --------------------WHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMVSQDL 40 usage_00392.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMV---- 56 usage_00409.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00411.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00412.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00414.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00416.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00418.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00419.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00421.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00423.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00476.pdb 1 ---QYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQN-- 55 usage_00637.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00641.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00690.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00692.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00694.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00696.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00708.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00711.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00713.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMV---- 56 usage_00715.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00716.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00740.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_00742.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00744.pdb 1 -----TNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 54 usage_00746.pdb 1 PGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQD- 59 usage_01189.pdb 1 -GGQYTNLHFQAHSMGLGSKFKEVKKAYVEANQMLGDLIKVTPSSKIVGDLAQFMV---- 55 usage_01512.pdb 1 PGGQYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQND- 59 usage_01514.pdb 1 --GQYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQND- 57 usage_01598.pdb 1 ---QYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVAPSSKVVGDMALYMVQN-- 55 V Y N fGDivKV PSSKvVGDmAl MV usage_00235.pdb ------- usage_00237.pdb ------- usage_00378.pdb 41 TVADVVS 47 usage_00380.pdb ------- usage_00382.pdb ------- usage_00384.pdb ------- usage_00390.pdb 41 TVADVVS 47 usage_00392.pdb ------- usage_00409.pdb ------- usage_00411.pdb ------- usage_00412.pdb ------- usage_00414.pdb ------- usage_00416.pdb ------- usage_00418.pdb ------- usage_00419.pdb ------- usage_00421.pdb ------- usage_00423.pdb ------- usage_00476.pdb ------- usage_00637.pdb ------- usage_00641.pdb ------- usage_00690.pdb ------- usage_00692.pdb ------- usage_00694.pdb ------- usage_00696.pdb ------- usage_00708.pdb ------- usage_00711.pdb ------- usage_00713.pdb ------- usage_00715.pdb ------- usage_00716.pdb ------- usage_00740.pdb ------- usage_00742.pdb ------- usage_00744.pdb ------- usage_00746.pdb ------- usage_01189.pdb ------- usage_01512.pdb ------- usage_01514.pdb ------- usage_01598.pdb ------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################