################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:42 2021 # Report_file: c_0046_23.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00024.pdb # 2: usage_00025.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00239.pdb # 7: usage_00246.pdb # # Length: 204 # Identity: 30/204 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/204 ( 38.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/204 ( 4.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 GAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELC 60 usage_00025.pdb 1 GAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELC 60 usage_00065.pdb 1 GSLIAMITPFI-NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALV 59 usage_00066.pdb 1 GSLIAMITPFI-NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALV 59 usage_00067.pdb 1 GSLIAMITPFI-NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALV 59 usage_00239.pdb 1 GIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFT 60 usage_00246.pdb 1 GVGVALTTPFT-NNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTV 59 G a iTPF ng d A v i g p GtTgEsptLt E r usage_00024.pdb 61 VEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIA 120 usage_00025.pdb 61 VEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIA 120 usage_00065.pdb 60 AEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVH 119 usage_00066.pdb 60 AEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVH 119 usage_00067.pdb 60 AEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVH 119 usage_00239.pdb 61 LKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVV-LPISYWKLNEAEVFQHYRAVG 119 usage_00246.pdb 60 IDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIA 119 RVPv ag g n v a A GAdAv yYn q gl Hf usage_00024.pdb 121 KAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKCGKDFV 180 usage_00025.pdb 121 KAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKCGKDFV 180 usage_00065.pdb 120 DAIDIPIIVYNIPPRAVVDIKPETMARLAA-LPRIVGVKDATTDLARISRERMLINKPFS 178 usage_00066.pdb 120 DAIDIPIIVYNIPPRAVVDIKPETMARLAA-LPRIVGVKDATTDLARISRERMLINKPFS 178 usage_00067.pdb 120 DAIDIPIIVYNIPPRAVVDIKPETMARLAA-LPRIVGVKDATTDLARISRERMLINKPFS 178 usage_00239.pdb 120 EAIGVPV-LYNNPGTSGID-SVELILRIVREVDNVT-VKESTGDIQR-HKLRLLGEGRVP 175 usage_00246.pdb 120 DAVKLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIVALKDATNDFEYLEEVKKRIDTNSF 178 Ai P YN P r d Et l i vKdaT r r usage_00024.pdb 181 QLSGD-DCTALGFNAHGGVGCISV 203 usage_00025.pdb 181 QLSGD-DCTALGFNAHGGVGCISV 203 usage_00065.pdb 179 FLSGD-DMTAIAYNASGGQGCISV 201 usage_00066.pdb 179 FLSGD-DMTAIAYNASGGQGCISV 201 usage_00067.pdb 179 FLSGD-DMTAIAYNASGGQGCISV 201 usage_00239.pdb 176 FYNG--NPLALEAFVAGAKGWCSA 197 usage_00246.pdb 179 ALYSGNDDNVVEYYQRGGQGVISV 202 l g d a Gg G iSv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################