################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:18 2021 # Report_file: c_0082_28.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00180.pdb # 8: usage_00181.pdb # 9: usage_00182.pdb # 10: usage_00183.pdb # 11: usage_00184.pdb # 12: usage_00323.pdb # 13: usage_00355.pdb # # Length: 168 # Identity: 104/168 ( 61.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 104/168 ( 61.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/168 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 ------GILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 54 usage_00006.pdb 1 ------GILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 54 usage_00007.pdb 1 ------GILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 54 usage_00036.pdb 1 ------GILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSA 54 usage_00037.pdb 1 ------GILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSA 54 usage_00038.pdb 1 ------GILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSA 54 usage_00180.pdb 1 PLSYYTGILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 60 usage_00181.pdb 1 PLSYYTGILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 60 usage_00182.pdb 1 PLSYYTGILGMVGLTAYVGFYDICSPKKGERVFVSAAAGAVGQIVGQFAKQFGCYVVGSA 60 usage_00183.pdb 1 ------GLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 54 usage_00184.pdb 1 PLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 60 usage_00323.pdb 1 PLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSA 60 usage_00355.pdb 1 PLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 60 G LGM G TAY GF CSPK GE V VSAA GAVGQ VGQ AK GCYVVGSA usage_00005.pdb 55 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 114 usage_00006.pdb 55 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 114 usage_00007.pdb 55 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 114 usage_00036.pdb 55 GSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKL 114 usage_00037.pdb 55 GSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKL 114 usage_00038.pdb 55 GSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKL 114 usage_00180.pdb 61 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 120 usage_00181.pdb 61 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 120 usage_00182.pdb 61 GSDEKVNLLKTKFGFDEAFNYKKEPDLTKALKRYFPEGIDIYFENVGGPMLEAVLHNMRI 120 usage_00183.pdb 55 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 114 usage_00184.pdb 61 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 120 usage_00323.pdb 61 GSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKL 120 usage_00355.pdb 61 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 120 GS EKV LLK KFGFD AFNYK E DL ALKR FP GIDIYFENVGG ML AVL NM usage_00005.pdb 115 KGRIAACGMI-----------GVHNLFLIVGKRIRLEGFLVFDHYGSY 151 usage_00006.pdb 115 KGRIAACGMIS-QY-NLEKPEGVHNLFLIVGKRIRLEGFLVFDHYGSY 160 usage_00007.pdb 115 KGRIAACGMIS-QYN------GVHNLFLIVGKRIRLEGFLVFDHYGSY 155 usage_00036.pdb 115 YGRIAVCGMIS-QY-NLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 160 usage_00037.pdb 115 YGRIAVCGMI----------EGVHNLFCLITKRIRMEGFLVFDYYHLY 152 usage_00038.pdb 115 YGRIAVCGMISQ--------EGVHNLFCLITKRIRMEGFLVFDYYHLY 154 usage_00180.pdb 121 KGRIAACGME-----------GVHNLFLIVGKRIRLEGFLVFDHYGSY 157 usage_00181.pdb 121 KGRIAACGMP----------EGVHNLFLIVGKRIRLEGFLVFDHYGSY 158 usage_00182.pdb 121 KGRIAACGMI-----------GVHNLFLIVGKRIRLEGFLVFDHYGSY 157 usage_00183.pdb 115 HGRIAVCGMIS-QY-NLENQEGVHNLSNIIYKRNRIQGFVVSDFYDK- 159 usage_00184.pdb 121 HGRIAVCGMIS-QY-NLENQEGVHNLSNIIYKRNRIQGFVVSDFYDK- 165 usage_00323.pdb 121 YGRIAVCGMISQ--------EGVHNLFCLITKRIRMEGFLVFDYYHLY 160 usage_00355.pdb 121 HGRIAVCGMIS-QY-NLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKY 166 GRIA CGM GVHNL KR R GF V D Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################