################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:38 2021 # Report_file: c_1032_117.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00266.pdb # 2: usage_00565.pdb # 3: usage_00597.pdb # 4: usage_00787.pdb # 5: usage_00788.pdb # # Length: 56 # Identity: 1/ 56 ( 1.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 56 ( 44.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 56 ( 39.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00266.pdb 1 -IVLIETS-----HSGNIGSAARA-KT-G-L-TQLCLVSPKSV-DEQSYALSA--- 42 usage_00565.pdb 1 MVMLKDNHIWATG---SITNAVKNARAVCGFAVKIEVEC----LSEDEATEAIEAG 49 usage_00597.pdb 1 -IVLVETS-----HTGNMGSVARAMKTMG-L-TNLWLVNPLVKPDSQAIALAA--- 45 usage_00787.pdb 1 -IVLVETS-----HTGNMGSVARAMKTMG-L-TNLWLVNPLVKPDSQAIALA---- 44 usage_00788.pdb 1 -IVLVETS-----HTGNMGSVARAMKTMG-L-TNLWLVNPLVKPDSQAIALAA--- 45 ivL ets n gs ara kt g l t l lv d q ala #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################