################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:30 2021 # Report_file: c_0215_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00004.pdb # 2: usage_00041.pdb # 3: usage_00046.pdb # 4: usage_00047.pdb # 5: usage_00050.pdb # 6: usage_00051.pdb # 7: usage_00052.pdb # 8: usage_00083.pdb # 9: usage_00088.pdb # # Length: 160 # Identity: 44/160 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 137/160 ( 85.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/160 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00041.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVG----ERTVWQYHFRTWPDHGVPSDPGG 55 usage_00046.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00047.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00050.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00051.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00052.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 usage_00083.pdb 1 KTTMVSNRLRLALVRMQQLKGFVVRAMTLEDIQTR-EVRHISHLNFTAWPDHDTPSQPDD 59 usage_00088.pdb 1 ALK-EYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGG 59 alk eygvmRvrnVkesaahdytlRelkLskvg eRtvwqyhFrtWPDHgvPSdPgg usage_00004.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00041.pdb 56 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 115 usage_00046.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00047.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00050.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIARTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00051.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00052.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGMFIVIDILIDIIREKGVDCDIDVPKTI 119 usage_00083.pdb 60 LLTFISYMRHIH---R-SGPIITHCSAGIGRSGTLICIDVVLGLISQD---LDFDISDLV 112 usage_00088.pdb 60 VLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 119 vLdFleevhHkq m aGPvvvHCSAGIgRtGtfIvIDilidiIrek cDiDvpkti usage_00004.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQ- 158 usage_00041.pdb 116 QMVRSQRSGMVQTEAQYRFIYMAVQHYIET---------- 145 usage_00046.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQK 159 usage_00047.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQ- 158 usage_00050.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRR------ 153 usage_00051.pdb 120 QMVRSQRSGMVPTEAQYRFIYMAVQHYIETLQR------- 152 usage_00052.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIE----------- 148 usage_00083.pdb 113 RCMRLQRHGMVQTEDQYIFCYQVILYVLTRLQAEEE---- 148 usage_00088.pdb 120 QMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQR------- 152 qmvRsQRsGMVqTEaQYrFiYmavqhyie #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################