################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:59 2021 # Report_file: c_0385_60.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00005.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00131.pdb # 5: usage_00161.pdb # 6: usage_00320.pdb # 7: usage_00321.pdb # 8: usage_00372.pdb # 9: usage_00374.pdb # 10: usage_00488.pdb # 11: usage_00571.pdb # # Length: 80 # Identity: 17/ 80 ( 21.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 80 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 80 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -----TTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIVGYAIGTQQATP 55 usage_00114.pdb 1 ------MR---FSAAEGAKVLLSVP-D--NLLSFSWYKGKDVNENFTIAHYKKSSDSLQL 48 usage_00115.pdb 1 ALLTSKEMR--FSAAEGAKVLLSVP-D---LLSFSWYKGKDVNENFTIAHYKKSSDSLQL 54 usage_00131.pdb 1 -----TIESTPFNVAEGKEVLLLAHNLPQNRIGYSWYKGERVDGNSLIVGYVIGTQQATP 55 usage_00161.pdb 1 -----------FNVAEGKEVLLLVHNLPQHLFGYSWYKGERCDGNCQIIGYVIGTQCATP 49 usage_00320.pdb 1 -----TTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIVGYAIGTQQATP 55 usage_00321.pdb 1 -----TTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIVGYAIGTQQATP 55 usage_00372.pdb 1 -----------PQVAEDNNVLLLVHNLPLALGAFAWYKGNPVSTNAEIVHFVTGTNKTTT 49 usage_00374.pdb 1 -----TTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIVGYAIGTQQATP 55 usage_00488.pdb 1 -----TIESTPFNVAEGKEVLLLAHNLPQNRIGYSWYKGERVDGNSLIVGYVIGTQQATP 55 usage_00571.pdb 1 -----------PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFT 49 AE VLL WYKG n I usage_00005.pdb 56 GPANSGRETIYPNASLLIQN 75 usage_00114.pdb 49 GKKVSGREEIYKDGSMMLRA 68 usage_00115.pdb 55 GKKVSGREEIYKDGSMMLRA 74 usage_00131.pdb 56 GPAYSGRETIYPNASLLIQN 75 usage_00161.pdb 50 GPAYSGREIIYPNASLLIQN 69 usage_00320.pdb 56 GPANSGRETIYPNASLLIQN 75 usage_00321.pdb 56 GPANSGRETIYPNASLLIQN 75 usage_00372.pdb 50 GPAHSGRETVYSNGSLLIQR 69 usage_00374.pdb 56 GPANSGRETIYPNASLLIQN 75 usage_00488.pdb 56 GPAYSGRETIYPNASLLIQN 75 usage_00571.pdb 50 GQAYSGREIIYSNGSLLFQM 69 G SGRE iY S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################