################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:11 2021 # Report_file: c_0406_34.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00041.pdb # 2: usage_00194.pdb # 3: usage_00236.pdb # 4: usage_00237.pdb # 5: usage_00270.pdb # 6: usage_00341.pdb # 7: usage_00395.pdb # 8: usage_00396.pdb # 9: usage_00437.pdb # 10: usage_00459.pdb # # Length: 101 # Identity: 6/101 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/101 ( 11.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/101 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 -----DTEADIG---SDLRWSCVASGKPRPAVRWLRDGQPLA---S--QN-RIEVSG--- 43 usage_00194.pdb 1 ----RNLNVRYQ---SNATLVCKVTGHPKPIVKWYRQGKEII---A--DGLKYRIQEFKG 48 usage_00236.pdb 1 -----DIHVAME---ESVFWECKANGRPKPTYRWLKNGDPLL---T--RD-RIQIEQ--- 43 usage_00237.pdb 1 ----NDIHVAME---ESVFWECKANGRPKPTYRWLKNGDPLL---T--RD-RIQIEQ--- 44 usage_00270.pdb 1 ----NDTQLDSG---SPLQWECKATGKPRPTYRWLKNGAPLL---P--QS-RVDTVN--- 44 usage_00341.pdb 1 ----KMVQVQVG---SLVILDCKPRASPRALSFWKKGDMMVR---E--QA-RVSFLN--- 44 usage_00395.pdb 1 -----SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMK---LEPGS-RHQLVG--- 48 usage_00396.pdb 1 -----DTEADIG---SNLRWGCAAAGKPRPTVRWLRNGEPLA---S--QN-RVEVLA--- 43 usage_00437.pdb 1 ----NDIHVAME---ESVFWECKANGRPKPTYRWLKNGDPLL---T--RD-RIQIEQ--- 44 usage_00459.pdb 1 LDEPKNLILAPG---EDGRLVCRANGNPKPTVQWMVNGEPLQSAPP--NP-NREVAG--- 51 C P W g usage_00041.pdb 44 --GE-LRFSKLVL-EDSGMYQCVAENKHGTVYASAELTVQA 80 usage_00194.pdb 49 GYHQ-LIIASVTD-DDATVYQVRATNQGGSVSGTASLEV-- 85 usage_00236.pdb 44 --GT-LNITIVNL-SDAGMYQCVAENKHGVIFSSAELSV-- 78 usage_00237.pdb 45 --GT-LNITIVNL-SDAGMYQCVAENKHGVIFSSAELSV-- 79 usage_00270.pdb 45 --GI-LAIQSVNQ-SDAGMYQCLAENKYGAIYASAELKI-- 79 usage_00341.pdb 45 --DGGLKIMNVTK-ADAGTYTCTAENQFGKANGTTHLVV-- 80 usage_00395.pdb 49 --GN-LVIMNPTKAQDAGVYQCLASNPVGTVVSR------- 79 usage_00396.pdb 44 --GD-LRFSKLSL-EDSGMYQCVAENKHGTIYASAELAVQA 80 usage_00437.pdb 45 --GT-LNITIVNL-SDAGMYQCVAENKHGVIFSSAELSV-- 79 usage_00459.pdb 52 --DT-IIFRDTQI-SSRAVYQCNTSNEHGYLLANAFVSV-- 86 l d Yqc a N G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################