################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:17 2021 # Report_file: c_0903_19.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00080.pdb # 2: usage_00541.pdb # 3: usage_00655.pdb # 4: usage_00656.pdb # 5: usage_00831.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 66 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 66 ( 78.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 -------PMIETGSQTFYIAGSENAEVANQVLATNLDDRMRVPMSI-------------- 39 usage_00541.pdb 1 ---------SVVGS-----------------LIFCLDCGDLLENPNAVLGSNVECSQCKA 34 usage_00655.pdb 1 -------PMIETGSQTFYIAGSENAEVANQVLATNLDDRMRVPMSI-------------- 39 usage_00656.pdb 1 -------PMIETGSQTFYIAGSENAEVANQVLATNLDDRMRVPMSI-------------- 39 usage_00831.pdb 1 FVIHTGERTFVGAT-----PERHLT--------LHE----GCATMN-------------- 29 gs l usage_00080.pdb 40 ----Y- 40 usage_00541.pdb 35 IYPK-- 38 usage_00655.pdb 40 ----Y- 40 usage_00656.pdb 40 ----Y- 40 usage_00831.pdb 30 ----PI 31 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################