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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 04:58:32 2021
# Report_file: c_1243_86.html
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#====================================
# Aligned_structures: 36
#   1: usage_00042.pdb
#   2: usage_00043.pdb
#   3: usage_00044.pdb
#   4: usage_00046.pdb
#   5: usage_00057.pdb
#   6: usage_00199.pdb
#   7: usage_00206.pdb
#   8: usage_00228.pdb
#   9: usage_00298.pdb
#  10: usage_00299.pdb
#  11: usage_00300.pdb
#  12: usage_00301.pdb
#  13: usage_00307.pdb
#  14: usage_00331.pdb
#  15: usage_00349.pdb
#  16: usage_00350.pdb
#  17: usage_00394.pdb
#  18: usage_00395.pdb
#  19: usage_00412.pdb
#  20: usage_00426.pdb
#  21: usage_00427.pdb
#  22: usage_00446.pdb
#  23: usage_00448.pdb
#  24: usage_00587.pdb
#  25: usage_00629.pdb
#  26: usage_00671.pdb
#  27: usage_00703.pdb
#  28: usage_00754.pdb
#  29: usage_01048.pdb
#  30: usage_01049.pdb
#  31: usage_01064.pdb
#  32: usage_01109.pdb
#  33: usage_01110.pdb
#  34: usage_01186.pdb
#  35: usage_01238.pdb
#  36: usage_01239.pdb
#
# Length:         22
# Identity:       16/ 22 ( 72.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/ 22 ( 72.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            1/ 22 (  4.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00042.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00043.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00044.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00046.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00057.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00199.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00206.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00228.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00298.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00299.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00300.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00301.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00307.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00331.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00349.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00350.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00394.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00395.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00412.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00426.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00427.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00446.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00448.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00587.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00629.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00671.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00703.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_00754.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_01048.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_01049.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_01064.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_01109.pdb         1  HIVHCSNDPLGELFGVQEFSVK   22
usage_01110.pdb         1  HIVHCSNDPLGELFGVQEFSVK   22
usage_01186.pdb         1  -IVYCSNDLLGDLFGVPSFSVK   21
usage_01238.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
usage_01239.pdb         1  HIVYCSNDLLGDLFGVPSFSVK   22
                            IV CSND LG LFGV  FSVK


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################