################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:30 2021 # Report_file: c_1427_7.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00093.pdb # 2: usage_00100.pdb # 3: usage_00124.pdb # 4: usage_00136.pdb # 5: usage_00150.pdb # # Length: 46 # Identity: 37/ 46 ( 80.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 46 ( 80.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 46 ( 19.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 -QYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSL 45 usage_00100.pdb 1 -QYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE-------- 37 usage_00124.pdb 1 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE-------- 38 usage_00136.pdb 1 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE-------- 38 usage_00150.pdb 1 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSL 46 QYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################