################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:26 2021 # Report_file: c_1489_384.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00271.pdb # 2: usage_00618.pdb # 3: usage_00619.pdb # 4: usage_01499.pdb # 5: usage_01736.pdb # 6: usage_03945.pdb # # Length: 33 # Identity: 2/ 33 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 33 ( 39.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 33 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00271.pdb 1 HAIIGQAVM-TGLAAAVTDMKVLMREARR---- 28 usage_00618.pdb 1 HAIVAHAVF-VGWDNAVREMKAIMVAARVAALH 32 usage_00619.pdb 1 HAIVAHAVF-VGWDNAVREMKAIMVAARVAAL- 31 usage_01499.pdb 1 HAIIGRAVM-TGLKDAVAEMKRLMLEARG---- 28 usage_01736.pdb 1 HAIIGRAVM-TGLKDAVAEMKRLMLEARG---- 28 usage_03945.pdb 1 ETLYQSAD-CSDANDALIVLIHLLMLESG---- 28 hai Av g Av mk m ar #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################