################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:25 2021 # Report_file: c_1033_76.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00020.pdb # 2: usage_00221.pdb # 3: usage_00255.pdb # 4: usage_00267.pdb # 5: usage_00490.pdb # 6: usage_00548.pdb # 7: usage_00633.pdb # 8: usage_00706.pdb # 9: usage_00945.pdb # 10: usage_00947.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 71 ( 1.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 71 ( 59.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -----GNALFTDLV--------VDLQDTFVSAM--KTLY----LADTFPTNFRDSAGAMK 41 usage_00221.pdb 1 -QLTTGNGLFLSEG--------LKLVDKFLEDV--KKLY----HSEAFTVNFGDTEEAKK 45 usage_00255.pdb 1 -----IFQIGKG-----------GINENMIKQI--DDTLENRELIKVHV-LQN----NFD 37 usage_00267.pdb 1 LEMTMGNALFLDGS--------LELLESFSADI--KHYY----ESEVLAMNFQDWATASR 46 usage_00490.pdb 1 -----NIKVLILVSNDEELDKA---KELAQKMEID---------V--RTRKVTSPDEAKR 41 usage_00548.pdb 1 -GLTQGSFAFIHKD--------FDVKETFFNLS--KRYF----DTECVPMNFRNASQAKR 45 usage_00633.pdb 1 ------NAMFVKEQ--------LSLLDRFTEDA--KRLY----GSEAFATDFQDSAAAKK 40 usage_00706.pdb 1 -EMTMGNALFLDGS--------LELLESFSADI--KHYY----ESEVLAMNFQDWATASR 45 usage_00945.pdb 1 -QLTTGNGLFLSEG--------LKLVDKFLEDV--KKLY----HSEAFTVNFGDTEEAKK 45 usage_00947.pdb 1 --LTTGNGLFLSEG--------LKLVDKFLEDV--KKLY----HSEAFTVNFGDTEEAKK 44 a usage_00020.pdb 42 QINDYVAKQT- 51 usage_00221.pdb 46 QINDYVEKGTQ 56 usage_00255.pdb 38 DKKELA----- 43 usage_00267.pdb 47 QINSYVKNKTQ 57 usage_00490.pdb 42 WIKEFSEEG-- 50 usage_00548.pdb 46 LMNHYINKETR 56 usage_00633.pdb 41 LINDYVKNGTR 51 usage_00706.pdb 46 QINSYVKNKTQ 56 usage_00945.pdb 46 QINDYVEKGT- 55 usage_00947.pdb 45 QINDYVEKGT- 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################