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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:48:06 2021
# Report_file: c_1287_2.html
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#====================================
# Aligned_structures: 12
#   1: usage_00351.pdb
#   2: usage_00570.pdb
#   3: usage_00584.pdb
#   4: usage_00585.pdb
#   5: usage_00586.pdb
#   6: usage_00587.pdb
#   7: usage_00588.pdb
#   8: usage_00718.pdb
#   9: usage_00758.pdb
#  10: usage_00778.pdb
#  11: usage_00836.pdb
#  12: usage_00839.pdb
#
# Length:         38
# Identity:        0/ 38 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      0/ 38 (  0.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 38 ( 55.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00351.pdb         1  NLKAINI-KTA---PY--PGF--ATDLQQPLTPLLLRA   30
usage_00570.pdb         1  ---NPVI-ICV---MV--GGLVPLGNLLHRL-------   22
usage_00584.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNR--   27
usage_00585.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNRN-   28
usage_00586.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNRN-   28
usage_00587.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNRN-   28
usage_00588.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNRNS   29
usage_00718.pdb         1  ---HCRVLLIT---PGFLQ-DPWCKYQMLQALT-----   26
usage_00758.pdb         1  ---HIVA-LCV---LK--GGYKFFADLLDYIKALNRNS   29
usage_00778.pdb         1  -----RH-WRLQYTQE--DLFRLTLETLPLWRALESRC   30
usage_00836.pdb         1  ----MVE-VRK---EK--QFQKVITEYLNAQESAKSAR   28
usage_00839.pdb         1  -----HI-LCL---LK--GSRGFFTALLKHLSRIHNYS   27
                                                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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