################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:43:08 2021 # Report_file: c_0112_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00029.pdb # 2: usage_00059.pdb # 3: usage_00076.pdb # 4: usage_00121.pdb # 5: usage_00122.pdb # 6: usage_00125.pdb # 7: usage_00126.pdb # 8: usage_00127.pdb # 9: usage_00128.pdb # 10: usage_00177.pdb # 11: usage_00223.pdb # 12: usage_00263.pdb # # Length: 112 # Identity: 41/112 ( 36.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/112 ( 49.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/112 ( 11.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 ---LTQPASVSGSPGQSITISCTGTSSDVGSYNFVSWYQQHPGKAPKLMIYEVSERPSGI 57 usage_00059.pdb 1 NFMLNQPHSVSESPGKTVTISCTRSSGNIDS-NYVQWYQQRPGSAPITVIYEDNQRPSGV 59 usage_00076.pdb 1 --ALTQPPSASGSPGQSITISCTG----TS-NNFVSWYQQYPGKAPKLVIYEVNKRPSGV 53 usage_00121.pdb 1 NFMLTQPHSVSESPGKTVTISCTRSSGSLAN-YYVQWYQQRPGSSPTIVIFANNQRPSGV 59 usage_00122.pdb 1 NFMLTQPHSVSESPGKTVTISCTRSSGSLAN-YYVQWYQQRPGSSPTIVIFANNQRPSGV 59 usage_00125.pdb 1 NFMLTQPPSVSESPGKTVTISCTRSSGSIAS-NYVQWYQQRPGSSPTTVIYEDNQRPSGV 59 usage_00126.pdb 1 NFMLTQPPSVSESPGKTVTISCTRSSGSIAS-NYVQWYQQRPGSSPTTVIYEDNQRPSGV 59 usage_00127.pdb 1 NFMLTQPPSVSESPGKTVTISCTRSSGSIAS-NYVQWYQQRPGSSPTTVIYEDNQRPSGV 59 usage_00128.pdb 1 NFMLTQPPSVSESPGKTVTISCTRSSGSIAS-NYVQWYQQRPGSSPTTVIYEDNQRPSGV 59 usage_00177.pdb 1 ---LTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 57 usage_00223.pdb 1 NFMLTQPHSVSESPGKTVTISCTRSSGSLAN-YYVQWYQQRPGSSPTIVIFANNQRPSGV 59 usage_00263.pdb 1 -FMLTQPHSVSESPGKTVTISCTGSSGSIAS-NYVQWYQQRPGSSPTTVIYEDNQRPSGV 58 LtQP S S SpG TISCT V WYQQ pG P I n RPSGv usage_00029.pdb 58 SNRFSGSKSG--NTASLTISGLQAEDEADYYCSSYAGSTTFRVFGGGTKLTV 107 usage_00059.pdb 60 PDRFAGSIDSSSNSASLTISGLKTEDEADYYCQSYDARNVVFG-GGTRLTV- 109 usage_00076.pdb 54 PDRFSGSKSG--STASLTVSGLQADDEGVYYCSSLVGNWDVIF-GGGTKLT- 101 usage_00121.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQTYDPYSVVFG-GGTKLTV- 109 usage_00122.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQTYDPYSVVFG-GGTKLTV- 109 usage_00125.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVF-GGGTKLTV 110 usage_00126.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVF-GGGTKLT- 109 usage_00127.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVF-GGGTKLTV 110 usage_00128.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVF-GGGTKLTV 110 usage_00177.pdb 58 PDRFSGSKSG--NTASLTVSGLQAEDEADYYCSSYEGSDNFVF-GTGTKVTV 106 usage_00223.pdb 60 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQTYDPYSVVFG-GGTKLTV- 109 usage_00263.pdb 59 PDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVF-GGGTKLTV 109 pdRFsGS n ASLT SGL eDEadYYC y Gg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################