################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:21 2021 # Report_file: c_0023_2.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00034.pdb # 8: usage_00038.pdb # 9: usage_00039.pdb # 10: usage_00040.pdb # # Length: 312 # Identity: 84/312 ( 26.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 157/312 ( 50.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/312 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 59 usage_00007.pdb 1 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 59 usage_00030.pdb 1 -PRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 58 usage_00031.pdb 1 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 59 usage_00032.pdb 1 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 59 usage_00033.pdb 1 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 59 usage_00034.pdb 1 -PRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSG 58 usage_00038.pdb 1 DERILEAMLPYMT--ESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGG-GGTVVFTSG 56 usage_00039.pdb 1 ----LPYLINYYG-----N-PHSRTHAYGWESEAAMERARQQVASLIGADPR-EIIFTSG 49 usage_00040.pdb 1 ----LPYLINYYG-----N-PHSRTHAYGWESEAAMERARQQVASLIGADPR-EIIFTSG 49 P S H Gw e A AR q A L gad r ei FTSG usage_00006.pdb 60 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 119 usage_00007.pdb 60 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 119 usage_00030.pdb 59 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 118 usage_00031.pdb 60 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 119 usage_00032.pdb 60 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 119 usage_00033.pdb 60 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 119 usage_00034.pdb 59 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 118 usage_00038.pdb 57 ATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDV 116 usage_00039.pdb 50 ATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQKSGIIDL 109 usage_00040.pdb 50 ATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQKSGIIDL 109 ATEs N AIkG A fy KH it tEHk Vld cr Le eGF VtYl q GiiDl usage_00006.pdb 120 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 178 usage_00007.pdb 120 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 178 usage_00030.pdb 119 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 177 usage_00031.pdb 120 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 178 usage_00032.pdb 120 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 178 usage_00033.pdb 120 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 178 usage_00034.pdb 119 KELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCR-ARGIIYHVDATQSVGKLPIDLS 177 usage_00038.pdb 117 SFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAG--KAALHIDATASVGQIEVDVE 174 usage_00039.pdb 110 KELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICS-SRKVYFHTDAAQAVGKIPLDVN 168 usage_00040.pdb 110 KELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICS-SRKVYFHTDAAQAVGKIPLDVN 168 keleaa DT LVS m vNNEIGv Q ia Ig c H DA q VGk p D usage_00006.pdb 179 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 238 usage_00007.pdb 179 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 238 usage_00030.pdb 178 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 237 usage_00031.pdb 179 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 238 usage_00032.pdb 179 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 238 usage_00033.pdb 179 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 238 usage_00034.pdb 178 QLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMG 237 usage_00038.pdb 175 KIGADMLTISSNDIYGPKGVGALWIRK--EAKLQPVILGGGQENGLRSGSENVPSIVGFG 232 usage_00039.pdb 169 DMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPLVVGLG 228 usage_00040.pdb 169 DMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPLVVGLG 228 k Dlms SghkIYGPKG GA y Rr rvr ea GGG ErGmRSGt p VG G usage_00006.pdb 239 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 294 usage_00007.pdb 239 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 294 usage_00030.pdb 238 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 293 usage_00031.pdb 239 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 294 usage_00032.pdb 239 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 294 usage_00033.pdb 239 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 294 usage_00034.pdb 238 EAYRIAKEEMATEMERLRGLRNRLW-NGIKDIEEVYLNGDLEHGAPNILNVSFNYV---E 293 usage_00038.pdb 233 KAAEITAMEWREEAERLRRLRDRII-DNVLKIEESYLNGHPEKRLPNNVNVRFSYI---E 288 usage_00039.pdb 229 AACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAYVEGES 288 usage_00040.pdb 229 AACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAYVEGES 288 A a Em R L Rl n k v NGd h P N sF Yv usage_00006.pdb 295 GESLIMALK--- 303 usage_00007.pdb 295 GESLIMALK--- 303 usage_00030.pdb 294 GESLIMALK--- 302 usage_00031.pdb 295 GESLIMALK--- 303 usage_00032.pdb 295 GESLIMALK--- 303 usage_00033.pdb 295 GESLIMALK--- 303 usage_00034.pdb 294 GESLIMALK--- 302 usage_00038.pdb 289 GESIVLSLDMAG 300 usage_00039.pdb 289 LLMALKDV---- 296 usage_00040.pdb 289 LLMALKD----- 295 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################