################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:14 2021 # Report_file: c_0653_51.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00469.pdb # 2: usage_00504.pdb # 3: usage_00505.pdb # 4: usage_00730.pdb # 5: usage_00731.pdb # 6: usage_00841.pdb # 7: usage_01628.pdb # 8: usage_01649.pdb # # Length: 63 # Identity: 7/ 63 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 63 ( 25.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 63 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00469.pdb 1 HRVGIFLDVGR-SIAFYN-VS--DGCHIYTFIEIPVCEPWRPFFAHKR-GSQDDQSILS- 54 usage_00504.pdb 1 CQIGIFVDYEAGVVSFYNITD--HGSLIYTFSECVFAGPLRPFFNVGFNYSGGNAAPLKL 58 usage_00505.pdb 1 CQIGIFVDYEAGVVSFYNITD--HGSLIYTFSECVFAGPLRPFFNVGFNYSGGNAAPLKL 58 usage_00730.pdb 1 CQVGIFLDYEAGMVSFYNITD--HGSLIYSFSECAFTGPLRPFFSPGFNDGGKNTAPLTL 58 usage_00731.pdb 1 CQVGIFLDYEAGMVSFYNITD--HGSLIYSFSECAFTGPLRPFFSPGFNDGGKNTAPLTL 58 usage_00841.pdb 1 CQIGIFVDYEAGVVSFYNITD--HGSLIYTFSECVFAGPLRPFFNVGFNYSGGNAAPLKL 58 usage_01628.pdb 1 KKVGVFLDYETGDISFYNAVD---GSHIHTFLDVSFSEALYPVFRILT-L---EPTALTI 53 usage_01649.pdb 1 TRIGLYLSFGDGVLSFYDASDADALVPLFAFH-ERLPRPVYPFFDVCWHDKGKNAQPLLL 59 G f d sFYn d g i F p PfF L usage_00469.pdb --- usage_00504.pdb --- usage_00505.pdb --- usage_00730.pdb --- usage_00731.pdb --- usage_00841.pdb --- usage_01628.pdb 54 CPA 56 usage_01649.pdb --- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################