################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:02 2021 # Report_file: c_0496_13.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00053.pdb # 2: usage_00054.pdb # 3: usage_00055.pdb # 4: usage_00056.pdb # 5: usage_00066.pdb # 6: usage_00067.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00071.pdb # 10: usage_00072.pdb # 11: usage_00073.pdb # 12: usage_00074.pdb # # Length: 86 # Identity: 75/ 86 ( 87.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/ 86 ( 87.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 86 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00054.pdb 1 NLYGKTKLDGEKAVLENN---AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 57 usage_00055.pdb 1 NLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 60 usage_00056.pdb 1 NLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 60 usage_00066.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00067.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00069.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00070.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00071.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00072.pdb 1 -LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 59 usage_00073.pdb 1 --YGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW 58 usage_00074.pdb 1 NLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTV-FDKVQFSNKSAN-DHW 58 YGKTKLDGEKAVLENN AVLRIPILYGEVEKLEESAVTV FDKVQFSNKSAN DHW usage_00053.pdb 60 QQRFPTHVKDVATVCRQLAEKRMLDP 85 usage_00054.pdb 58 QQRFPTHVKDVATVCRQLAEKRMLD- 82 usage_00055.pdb 61 QQRFPTHVKDVATVCRQLAEKRM--- 83 usage_00056.pdb 61 QQRFPTHVKDVATVCRQLAEKRMLDP 86 usage_00066.pdb 60 QQRFPTHVKDVATVCRQLAEKRM--- 82 usage_00067.pdb 60 QQRFPTHVKDVATVCRQLAEKRMLDP 85 usage_00069.pdb 60 QQRFPTHVKDVATVCRQLAEKRM--- 82 usage_00070.pdb 60 QQRFPTHVKDVATVCRQLAEKRM--- 82 usage_00071.pdb 60 QQRFPTHVKDVATVCRQLAEKRM--- 82 usage_00072.pdb 60 QQRFPTHVKDVATVCRQLAEKRM--- 82 usage_00073.pdb 59 QQRFPTHVKDVATVCRQLAEKRM--- 81 usage_00074.pdb 59 QQRFPTHVKDVATVCRQLAEKR---- 80 QQRFPTHVKDVATVCRQLAEKR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################