################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:38 2021 # Report_file: c_0713_27.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00087.pdb # 2: usage_00120.pdb # 3: usage_00121.pdb # 4: usage_00197.pdb # 5: usage_00275.pdb # # Length: 69 # Identity: 14/ 69 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 69 ( 46.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 69 ( 29.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 --ANEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQGQRQE-KVHYIDATLWRD 57 usage_00120.pdb 1 -ALNQVILMGNLTRDPDLRYTPQGTAVVRLGLAVNE------------RTHFLEVQAWRE 47 usage_00121.pdb 1 -ALNQVILMGNLTRDPDLRYTPQGTAVVRLGLAVNE----------E-RTHFLEVQAWRE 48 usage_00197.pdb 1 SFFNKIILIGRLVRDPEERYTL--TPVTTFTIAVDR------------TTDFFRIVTFGR 46 usage_00275.pdb 1 RALNQVILMGNLTRDPDLRYTPQGTAVVRLGLAVNE-----------RRTHFLEVQAWRE 49 N vil GnltRDP RYTp taV l AVne thf wr usage_00087.pdb 58 LAENK---- 62 usage_00120.pdb 48 LAEWAS--- 53 usage_00121.pdb 49 LAEWAS--- 54 usage_00197.pdb 47 LAEFARTYL 55 usage_00275.pdb 50 LAEWAS--- 55 LAE a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################