################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:05:27 2021 # Report_file: c_0421_21.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00020.pdb # 2: usage_00021.pdb # 3: usage_00057.pdb # 4: usage_00081.pdb # # Length: 98 # Identity: 11/ 98 ( 11.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 98 ( 35.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 98 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 ---LTIFVATENGKPVATATLLIVPN-LTRAARPYAFIENVVTLEARRGRGYGRTVVRHA 56 usage_00021.pdb 1 --GLTIFVATENGKPVATATLLIVPN-LTRAARPYAFIENVVTLEARRGRGYGRTVVRHA 57 usage_00057.pdb 1 ATALDDWVVRSGGRVVGALRLALPDGA------PTARVDQLLVHPGRRRRGIGRALWAHA 54 usage_00081.pdb 1 ----ELIVACNGEEIVGMLQVTFTPY-LTYQGSWRATIEGVRTHSAARGQGIGSQLVCWA 55 Va g V l p p A ie v t arRgrG Gr v hA usage_00020.pdb 57 IETAFGANCYKV-LLTGR-------HDPAVHAFYESC- 85 usage_00021.pdb 58 IETAFGANCYKV-LLTGR-------HDPAVHAFYESCG 87 usage_00057.pdb 55 RELARKHDRTTLTATVVESLPSGPAQDPGPAAFAAAG- 91 usage_00081.pdb 56 IERAKERGCHLIQLTTDK-------QRPDALRFYEQLG 86 iE A c l t dP aFye #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################