################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:21:10 2021 # Report_file: c_1142_43.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00035.pdb # 2: usage_00036.pdb # 3: usage_00038.pdb # 4: usage_00168.pdb # 5: usage_00260.pdb # 6: usage_00408.pdb # 7: usage_00472.pdb # 8: usage_00496.pdb # 9: usage_00497.pdb # 10: usage_00684.pdb # 11: usage_00707.pdb # 12: usage_00708.pdb # 13: usage_00709.pdb # 14: usage_01005.pdb # 15: usage_01066.pdb # 16: usage_01223.pdb # 17: usage_01224.pdb # 18: usage_01303.pdb # 19: usage_01660.pdb # 20: usage_02123.pdb # 21: usage_02124.pdb # 22: usage_02125.pdb # # Length: 47 # Identity: 1/ 47 ( 2.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 47 ( 36.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 47 ( 38.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00036.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00038.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00168.pdb 1 TNP----RHVEVQVLSDGQGNAIHLGDR-DCSLQRRHQKVIEEA--- 39 usage_00260.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00408.pdb 1 -R-GMPQIEVTFDIDA----DGILHVSAKDKN---SGKEQKITIKA- 37 usage_00472.pdb 1 -------RHVEIQVFADRHGHCLYLNER-DCSIQRRHQKVVEEA--P 37 usage_00496.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00497.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00684.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00707.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00708.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_00709.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_01005.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_01066.pdb 1 -------RHLEVQLLADQYGTNISLFGR-DCSVQRRHQKIIEEA--- 36 usage_01223.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_01224.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--P 37 usage_01303.pdb 1 -------RHLEVQLLADQYGTNISLFGR-DCSVQRRHQKIIEEA--- 36 usage_01660.pdb 1 -------RHVEIQVLADTHGNAVYLAER-DCSMQRRHQKVVEEA--- 36 usage_02123.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_02124.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 usage_02125.pdb 1 -------RHVEIQVLADGQGNAIYLAER-DCSMQRRHQKVVEEA--- 36 rh e q a l r Dcs rhqk eea #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################