################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:25 2021 # Report_file: c_1487_33.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00265.pdb # 2: usage_01137.pdb # 3: usage_01488.pdb # 4: usage_01489.pdb # 5: usage_03727.pdb # 6: usage_03728.pdb # 7: usage_03729.pdb # 8: usage_03730.pdb # 9: usage_03731.pdb # 10: usage_03732.pdb # 11: usage_03733.pdb # # Length: 52 # Identity: 1/ 52 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 52 ( 36.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 52 ( 61.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00265.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_01137.pdb 1 S---------------QAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHG 37 usage_01488.pdb 1 --TLQEQIGWTHNPPIPVGEIYKRWIILGLNKIVRY---------------- 34 usage_01489.pdb 1 --TLQEQIGWTHNPPIPVGEIYKRWIILGLNKIVRY---------------- 34 usage_03727.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_03728.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRM---------------- 35 usage_03729.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_03730.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_03731.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_03732.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 usage_03733.pdb 1 -TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS-------------- 37 pvgeiykrwiilglNkivr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################