################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:00 2021 # Report_file: c_1115_27.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00315.pdb # 2: usage_00320.pdb # 3: usage_00472.pdb # 4: usage_00485.pdb # 5: usage_00489.pdb # 6: usage_00551.pdb # 7: usage_01261.pdb # 8: usage_01411.pdb # # Length: 80 # Identity: 6/ 80 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 80 ( 43.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 80 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00315.pdb 1 ------------AATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 45 usage_00320.pdb 1 LPLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 57 usage_00472.pdb 1 -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 56 usage_00485.pdb 1 -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 56 usage_00489.pdb 1 -PLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 56 usage_00551.pdb 1 LPLDSATTESLRAATHDVLAGLT--AREAKVLRMRFGIDMNT-DYTLEEVGKQFDVTRER 57 usage_01261.pdb 1 ----DYAREELYRNVYQVLRGENPDDPTYLTVSTFLK-----YGSSLENTAKELNVHPNT 51 usage_01411.pdb 1 SPVDAATQSLLSEELEKALSKLS--EREAMVLKLRKGLIDGR-EHTLEEVGAFFGVTRER 57 vL gl rea vl r g tLEevgk f Vtrer usage_00315.pdb 46 IRQIEAKALRKLR------- 58 usage_00320.pdb 58 IRQIEAKALRKLR------- 70 usage_00472.pdb 57 IRQIEAKALRKLR------- 69 usage_00485.pdb 57 IRQIEAKALRKLR------- 69 usage_00489.pdb 57 IRQIEAKALRKLR------- 69 usage_00551.pdb 58 IRQIEAKALRKLR------- 70 usage_01261.pdb 52 VRYRLKRAAETTG------- 64 usage_01411.pdb 58 IRQIENKALRKLKYHESRTR 77 iRqie kAlrkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################