################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:37 2021 # Report_file: c_0235_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00013.pdb # 4: usage_00036.pdb # 5: usage_00071.pdb # # Length: 193 # Identity: 15/193 ( 7.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/193 ( 19.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/193 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 --HMILVTGSAGRVGRAVVAALRTQGRTVRGFDL--R--------PSGTG-GEEVVGSLE 47 usage_00007.pdb 1 --HMILVTGSAGRVGRAVVAALRTQGRTVRGFDL--R--------PSGTG-GEEVVGSLE 47 usage_00013.pdb 1 --KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRPK---------------FHLHYGDLS 43 usage_00036.pdb 1 ----TLVTGATGFVGSAVARVLEERGHRLRLLVR--PTSDRS-NIA-ELN-AELAVGDLS 51 usage_00071.pdb 1 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDN--FATGRREHLK-DHPNLTFVEGSIA 57 l TG G G L G v g G l usage_00006.pdb 48 DGQALSDAIM--GVSAVLHLGA-FMS--WAPA-----DRDRMFAVNVEGTRRLLDAASAA 97 usage_00007.pdb 48 DGQALSDAIM--GVSAVLHLGA-FMS--WAPA-----DRDRMFAVNVEGTRRLLDAASAA 97 usage_00013.pdb 44 DTSNLTRILREVQPDEVYNLGA---M---SHVAVSFESPEYTADVDAMGTLRLLEAIRFL 97 usage_00036.pdb 52 DPDTLAPALK--GVKILFHVAADYRLWV---P-----DPETMMKANVEGTRNLMLAALEA 101 usage_00071.pdb 58 DHALVNQLIGDLQPDAVVHTAA-SYK--D-PD-----DWYNDTLTNCVGGSNVVQAAKKN 108 D l v h A d n Gt l Aa usage_00006.pdb 98 GV---RRFVFASSGEVYPENRPEF-LPVTEDHPL---CP-NSPYGLTKLLGEELVRFHQR 149 usage_00007.pdb 98 GV---RRFVFASSGEVYPENRPEF-LPVTEDHPL---CP-NSPYGLTKLLGEELVRFHQR 149 usage_00013.pdb 98 GLEKKTRFYQASTSELYG--LVQE-IPQKETTPF---YP-RSPYAVAKLYAYWITVNYRE 150 usage_00036.pdb 102 GV---EKIIYCSSVAALG--LRSDGVPADETTPVSESQV-IGIYKLSKYRAEQEVLRLIR 155 usage_00071.pdb 109 NV---GRFVYFQTALCYG-VKPIQ-QPVRLDHPR---NPANSSYAISKSANEDYLEYSG- 159 gv rf s y P e P p s Y K e usage_00006.pdb 150 SGAMETVIL-R-- 159 usage_00007.pdb 150 SGAMETVIL-R-- 159 usage_00013.pdb 151 SYGMYACNG-ILF 162 usage_00036.pdb 156 EKNLPAIIV-NPS 167 usage_00071.pdb 160 ---LDFVTFRLA- 168 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################