################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:01:12 2021 # Report_file: c_0490_11.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00009.pdb # 3: usage_00011.pdb # 4: usage_00055.pdb # 5: usage_00056.pdb # 6: usage_00076.pdb # 7: usage_00083.pdb # 8: usage_00092.pdb # 9: usage_00093.pdb # 10: usage_00097.pdb # 11: usage_00119.pdb # 12: usage_00120.pdb # 13: usage_00139.pdb # # Length: 81 # Identity: 15/ 81 ( 18.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 81 ( 51.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 60 usage_00009.pdb 1 GRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYY 60 usage_00011.pdb 1 SREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHH-----QKIKNFQILPC--TFFS 53 usage_00055.pdb 1 TRRESERLLLNAENPRGTFLVRESE----AYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 56 usage_00056.pdb 1 TRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 60 usage_00076.pdb 1 -RRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 59 usage_00083.pdb 1 TRRESERLLLNPENPRGTFLVRESETTKGAYCLSVS-------LNVAHYKIRKLDSGGFY 53 usage_00092.pdb 1 GRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYY 60 usage_00093.pdb 1 --KDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYY 58 usage_00097.pdb 1 TRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 60 usage_00119.pdb 1 TRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFY 60 usage_00120.pdb 1 TRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFY 60 usage_00139.pdb 1 TRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFY 60 eR ll nprGtFL ReSe Ay Ls vkhy Irkl gg y usage_00001.pdb 61 -ITSRTQFNSLQQLVAYYSK- 79 usage_00009.pdb 61 -ITTRAQFETLQQLVQHYSER 80 usage_00011.pdb 54 LDDGNTKFSDLIQLVDFYQLN 74 usage_00055.pdb 57 -ITSRTQFNSLQQLVAYYSKH 76 usage_00056.pdb 61 -ITSRTQFSSLQQLVAYYSKH 80 usage_00076.pdb 60 -ITSRTQFSSLQQLVAYYSKH 79 usage_00083.pdb 54 -ITSRTQFSSLQQLVAYYSKH 73 usage_00092.pdb 61 -ITTRAQFETLQQLVQHYSER 80 usage_00093.pdb 59 -ITTRAQFETLQQLVQHYSER 78 usage_00097.pdb 61 -ITSRTQFNSLQQLVAYYSKH 80 usage_00119.pdb 61 -ITSRTQFNSLQQLVAYYSKH 80 usage_00120.pdb 61 -ITSRTQFNSLQQLVAYYSKH 80 usage_00139.pdb 61 -ITSRTQFNSLQQLVAYYSKH 80 it r qF LqQLV Ys #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################