################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:47 2021 # Report_file: c_1193_123.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00294.pdb # 2: usage_00385.pdb # 3: usage_01017.pdb # 4: usage_01018.pdb # 5: usage_01019.pdb # # Length: 23 # Identity: 1/ 23 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 23 ( 34.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 23 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00294.pdb 1 DGYVKGLRG-RGGYEVDLAWTN- 21 usage_00385.pdb 1 GTIVYRGMF-D-NRDVAVKRI-L 20 usage_01017.pdb 1 PSWVYKAQNSRNGRHYALRRL-E 22 usage_01018.pdb 1 PSWVYKAQNSRNGRHYALRRL-E 22 usage_01019.pdb 1 PSWVYKAQNSRNGRHYALRRL-- 21 Vy r gr al r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################