################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:58:43 2021 # Report_file: c_0207_6.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00005.pdb # 2: usage_00015.pdb # 3: usage_00032.pdb # 4: usage_00041.pdb # 5: usage_00045.pdb # 6: usage_00059.pdb # 7: usage_00075.pdb # 8: usage_00076.pdb # 9: usage_00077.pdb # 10: usage_00078.pdb # 11: usage_00083.pdb # 12: usage_00084.pdb # 13: usage_00085.pdb # 14: usage_00086.pdb # 15: usage_00093.pdb # 16: usage_00097.pdb # 17: usage_00125.pdb # 18: usage_00126.pdb # 19: usage_00131.pdb # 20: usage_00136.pdb # 21: usage_00138.pdb # 22: usage_00148.pdb # 23: usage_00167.pdb # 24: usage_00189.pdb # # Length: 140 # Identity: 6/140 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/140 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/140 ( 34.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTN-----NH--N--NMYWYRQDTG-H-GLRLIHYS 47 usage_00015.pdb 1 --VLTQSPATLSLSPGERATLSCRASQ-----SV--SS-YLAWYQQKPG-Q-APRLLIYD 48 usage_00032.pdb 1 --AVTQSPRNKVTVTGENVTLSCRQTN-----SH--N--YMYWYRQDTG-H-ELRLIYYS 47 usage_00041.pdb 1 --VMTQTPASVSAAVGGTVTINCQASE-----TI--SN-YLAWYQQKPG-Q-PPKLLIYK 48 usage_00045.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-----SI--SS-YLNWYQQKPG-E-APKLLIYS 49 usage_00059.pdb 1 -IVLTQSPAIMSASPGEKVTMTCSASS-----SV--S--YMNWYQQKSG-T-SPKRWIYD 48 usage_00075.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00076.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00077.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00078.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00083.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00084.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00085.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00086.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 usage_00093.pdb 1 --ELTQSPSYLVASPGETITINCRASK-----SI--SK-SLAWYQEKPG-K-TNNLLIYS 48 usage_00097.pdb 1 --SELTQDPAVSVALGQTVRITCQGDS-L---RS--Y--YASWYQQKPG-Q-APVLVIYG 48 usage_00125.pdb 1 ----LTQPPSVSVSPGQTASITCSGDK-----LG--DK-YAYWYQQKPG-Q-SPVLVIYQ 46 usage_00126.pdb 1 -IVLTQSPAIMSASPGEKVTISCSASS-----SV--S--YMYWYHQKPG-S-SPKPWIYR 48 usage_00131.pdb 1 DVQITQSPSYLAASPGETITLNCRASK-----SI--SK-YLAWYQEKPG-K-TNKLLIYS 50 usage_00136.pdb 1 ----LTQPPSVSGAPGQRVTISCTGSSSNIGAG---Y--DVHWYQQLPG-T-APKLLIYG 49 usage_00138.pdb 1 -LSFRMSPTQKETRLGEKVELQCELLQ-----SGMAT--GCSWLRHIPGDDPRPTFLMYL 52 usage_00148.pdb 1 EIVLTQSPATLSLSPGERATLSCRASQ-----SV--HPKYFAWYQQKPG-Q-SPRLLIYS 51 usage_00167.pdb 1 ---VIQTPRYLVKGQGQKAKMRCIPEK-----GH--P--VVFWYQQNKN-N-EFKFLINF 46 usage_00189.pdb 1 --VLTQSPAIMSASPGEKVTMTCSASS-----SV--T--YMYWYQQKPG-S-SPRLLIYD 47 p G C Wy g y usage_00005.pdb 48 YGAGS--TEKG---DIPD-GY-KASRPSQE-QFSLILESATPSQTSVYFCASGG--G-G- 95 usage_00015.pdb 49 ----A--SNRA---TGIPARF-SGS-GSGT-DFTLTISSLEPEDFAVYYCQQRS--N-W- 92 usage_00032.pdb 48 YGAGN--LQIG---DVPD-GY-KATRTTQE-DFFLTLESASPSQTSLYFCASSDA-P-G- 96 usage_00041.pdb 49 ----A--STLA---SGVSSRF-KGS-GSGT-EYTLTISGVQCDDAATYYCQQGY--S-IS 93 usage_00045.pdb 50 ----A--SVLQ---SGVPSRF-SGS-GSGT-DFTLTISSLQPEDFATYYCQQSV--M-I- 93 usage_00059.pdb 49 ----T--SKLA---SGVPAHF-RGS-GSGT-SYSLTISGMEAEDAATYYCQQWS--S-N- 92 usage_00075.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00076.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00077.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00078.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00083.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00084.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00085.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00086.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 usage_00093.pdb 49 ----G--STLQ---SGIPSRF-SGS-GSGT-DFTLTISSLEPEDFAMYICQQHN--E-Y- 92 usage_00097.pdb 49 ----K--NNRP---SGIPDRF-SGS-SSGN-TASLTITGAQAEDEADYYCNSRD--N-I- 92 usage_00125.pdb 47 ----D--SKRP---SGIPERF-SGS-NSGN-TATLTISGTQAMDEADYYCQAWD--S-S- 90 usage_00126.pdb 49 ----T--SNLA---SGVPARF-SGS-GSGT-SYSLTISSMEAEDAATYYCQQYH--S-Y- 92 usage_00131.pdb 51 ----G--STLQ---SGIPSRF-SGS-GSGT-DFTLTISSLEPEDFAMYFCQQHN--E-Y- 94 usage_00136.pdb 50 ----N--SNRP---SGVPDRF-SGS-KSGT-SASLAITGLQAEDEADYYCQSYD--S-S- 93 usage_00138.pdb 53 S---AQRVKLA---EGLDPRHISGAKVSGT-KFQLTLSSFLQEDQGYYFCSVVS--N-S- 101 usage_00148.pdb 52 ----G--STRA---AGIADRF-SGG-GSGI-HFTLTITRVEPEDFAVYFCQQYG--G-S- 95 usage_00167.pdb 47 Q---N--QEVLQQIDMTEKRF-SAE-CPSNSPCSLEIQSSEAGDSALYLCASSLNNANS- 98 usage_00189.pdb 48 ----T--SNLA---SGVPVRF-SGS-GSGT-SYSLTISRMEAEDAATYYCQQRT--N-Y- 91 L Y C usage_00005.pdb 96 --TL--YFGAGTRL-SVL-- 108 usage_00015.pdb 93 --PP--WTFGQGTK-VE--- 104 usage_00032.pdb 97 --QL--YFGEGSKL-TVLEL 111 usage_00041.pdb 94 DIDN--SFGGGTEV-VVKGD 110 usage_00045.pdb 94 --PM--TFGQGTKV-E---- 104 usage_00059.pdb 93 --PF--TFGSGTKL-EINRA 107 usage_00075.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00076.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00077.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00078.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00083.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00084.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00085.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00086.pdb 92 --PL--TFGAGTKL-EL--- 103 usage_00093.pdb 93 --PW--TFGGGTKL-E---- 103 usage_00097.pdb 93 --GNHQVFG----------- 99 usage_00125.pdb 91 --TA--VVFGGGTKLT---- 102 usage_00126.pdb 93 --PL--TFGAGTKL-EL--- 104 usage_00131.pdb 95 --PY--TFGGGTKL-EIKRT 109 usage_00136.pdb 94 --VV--VFG----------- 98 usage_00138.pdb 102 --IL--YFSNFVPV-F---- 112 usage_00148.pdb 96 --PY--TFGQGTKV-EL--- 107 usage_00167.pdb 99 --DY--TFGS---------- 104 usage_00189.pdb 92 --PL--TFGAGTKL-EL--- 103 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################