################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:20 2021 # Report_file: c_1221_98.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00296.pdb # 2: usage_00327.pdb # 3: usage_00328.pdb # 4: usage_00329.pdb # 5: usage_00330.pdb # 6: usage_01043.pdb # 7: usage_01828.pdb # 8: usage_01829.pdb # 9: usage_02549.pdb # # Length: 60 # Identity: 6/ 60 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 60 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 60 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00296.pdb 1 KTLKGSIAVTPIGVGD---GSHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAILNF 57 usage_00327.pdb 1 -TFIIIVQVDTKGE-----HNSVTWTFHYEKLKEDVEEPNTLMNFCIEITKDIE------ 48 usage_00328.pdb 1 KTFIIIVQVDTKGE-----HNSVTWTFHYEKLKEDVEEPNTLMNFCIEITKDIETYHL-- 53 usage_00329.pdb 1 -TFIIIVQVDTK-------HNSVTWTFHYEKLKEDVEEPNTLMNFCIEITKDIETY---- 48 usage_00330.pdb 1 KTFIIIVQVDTKGE-----HNSVTWTFHYEKLKEDVEEPNTLMNFCIEITKDIE------ 49 usage_01043.pdb 1 KSFLLTIQVTPKP---GGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLLAE 57 usage_01828.pdb 1 KSIVFSVHVDTKGE-----DNLVTWSIDYEKLNESVKDPTSYLDFLLSVTRDIEAHH--- 52 usage_01829.pdb 1 KSIVFSVHVDTK--------NLVTWSIDYEKLNESVKDPTSYLDFLLSVTRDIEAHHL-- 50 usage_02549.pdb 1 KSIVFSVHVDTK-G-----ENLVTWSIDYEKLNESVKDPTSYLDFLLSVTRDIEAHHL-- 52 V k V W yEK e v P f i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################