################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:30 2021 # Report_file: c_0875_145.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00176.pdb # 2: usage_00177.pdb # 3: usage_00306.pdb # # Length: 126 # Identity: 8/126 ( 6.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/126 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 68/126 ( 54.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 ---AETIQKLCDRVASSTLLDD---RRNAVRALKSLSKKYR--LEVGIQAMEHLIHVLQT 52 usage_00177.pdb 1 HTEAETIQKLCDRVASSTLLDD---RRNAVRALKSLSKKYR--LEVGIQAMEHLIHVLQT 55 usage_00306.pdb 1 ----------------------LEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISN 38 rrnAvraLkslskkyR lEvgiqAmehLihvlqt usage_00176.pdb 53 DRS-DSEIIGY-ALDTLYNIISNDEEEE-DLG------------SQFTEIFIK------- 90 usage_00177.pdb 56 DRS-DSEIIGY-ALDTLYNIISNDE---EDLG------------SQFTEIF--------- 89 usage_00306.pdb 39 ---SQFTEIFIKQQENVTLLLSL---------LEEFDFHVRWPGVKLLTSLLKQLGPQVQ 86 dseiIgy aldtlyniiSn sqfteif usage_00176.pdb ------ usage_00177.pdb ------ usage_00306.pdb 87 QIILVS 92 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################