################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:06:02 2021 # Report_file: c_1239_85.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00003.pdb # 2: usage_00036.pdb # 3: usage_00045.pdb # 4: usage_00128.pdb # 5: usage_00235.pdb # 6: usage_00238.pdb # 7: usage_00240.pdb # 8: usage_00256.pdb # 9: usage_00524.pdb # 10: usage_00527.pdb # 11: usage_00575.pdb # 12: usage_00576.pdb # 13: usage_00597.pdb # 14: usage_00598.pdb # 15: usage_00603.pdb # 16: usage_00624.pdb # 17: usage_00667.pdb # 18: usage_00732.pdb # # Length: 34 # Identity: 30/ 34 ( 88.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 34 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 34 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYLL- 31 usage_00036.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYLLT 33 usage_00045.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYLLT 33 usage_00128.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYL-- 31 usage_00235.pdb 1 QPSKPFVGVLSAGINAASPNKELAKEFLENYL-- 32 usage_00238.pdb 1 QPSKPFVGVLSAGINAASPNKELAKEFLENYLLT 34 usage_00240.pdb 1 QPSKPFVGVLSAGINAASPNKELAKEFLENYL-- 32 usage_00256.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYL-- 30 usage_00524.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYLL- 31 usage_00527.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYLLT 32 usage_00575.pdb 1 QPSKPFVGVLSAGINAASPNKELAKEFLENYLLT 34 usage_00576.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYL-- 31 usage_00597.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYLLT 33 usage_00598.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYL-- 31 usage_00603.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYLL- 31 usage_00624.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYLL- 32 usage_00667.pdb 1 -PSKPFVGVLSAGINAASPNKELAKEFLENYL-- 31 usage_00732.pdb 1 --SKPFVGVLSAGINAASPNKELAKEFLENYL-- 30 SKPFVGVLSAGINAASPNKELAKEFLENYL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################