################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:12 2021 # Report_file: c_0626_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00008.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00021.pdb # 8: usage_00051.pdb # 9: usage_00080.pdb # # Length: 115 # Identity: 11/115 ( 9.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/115 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/115 ( 31.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 -IGSENMTGLARVIRGYMMTAYENVPLWHERDISHSSAERVILPDATIALNYMLNRFGNI 59 usage_00006.pdb 1 -IGSENMTGLARVIRGYMMTAYENVPLWHERDISHSSAERVILPDATIALNYMLNRFGNI 59 usage_00007.pdb 1 -ITCERLTGLSRMMRAYVDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 59 usage_00008.pdb 1 -ITCERLTGLSRMMRAYVDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 59 usage_00009.pdb 1 -ITCERLTGLSRMMRAYVDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 59 usage_00010.pdb 1 -ITCERLTGLSRMMRAYVDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 59 usage_00021.pdb 1 PVAAASVLAAANRVPALMSSIYQSMVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDV 60 usage_00051.pdb 1 ----------------YITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNI 44 usage_00080.pdb 1 -VSCELILAGARIVRNHATSMLDAMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFM 59 hER E P usage_00005.pdb 60 VKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIV---------- 104 usage_00006.pdb 60 VKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWE- 113 usage_00007.pdb 60 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNS 114 usage_00008.pdb 60 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNS 114 usage_00009.pdb 60 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKG-------------------- 94 usage_00010.pdb 60 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKG-------------------- 94 usage_00021.pdb 61 LKGMEVNAENMHQNIECTHGLIMAEAVMMALAPHM-------------------- 95 usage_00051.pdb 45 VDRLTVFEDNMRNNIDKTFGLIFSQRVLLALINKGMVREEAYDKV---------- 89 usage_00080.pdb 60 LGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPHT-GRKEAHDIVYLGCRRAVE- 112 V M N t GL V L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################