################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:19 2021 # Report_file: c_1434_197.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01042.pdb # 2: usage_01043.pdb # 3: usage_01044.pdb # 4: usage_01045.pdb # 5: usage_01046.pdb # 6: usage_01047.pdb # 7: usage_01048.pdb # 8: usage_01049.pdb # 9: usage_03251.pdb # 10: usage_03252.pdb # 11: usage_03253.pdb # # Length: 39 # Identity: 34/ 39 ( 87.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 39 ( 87.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 39 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01042.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKD 38 usage_01043.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKQTKD 38 usage_01044.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKD 38 usage_01045.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTK- 37 usage_01046.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKD 38 usage_01047.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKQTKD 38 usage_01048.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKD 38 usage_01049.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYK---- 34 usage_03251.pdb 1 CPEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKQTKD 39 usage_03252.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTK- 37 usage_03253.pdb 1 -PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTK- 37 PEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################