################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:39 2021 # Report_file: c_1261_264.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00452.pdb # 2: usage_01380.pdb # 3: usage_01381.pdb # 4: usage_01383.pdb # 5: usage_01385.pdb # 6: usage_01389.pdb # 7: usage_01391.pdb # 8: usage_02287.pdb # 9: usage_02288.pdb # 10: usage_02978.pdb # 11: usage_02979.pdb # 12: usage_03101.pdb # 13: usage_03104.pdb # 14: usage_03106.pdb # 15: usage_03108.pdb # 16: usage_03115.pdb # 17: usage_03116.pdb # 18: usage_03118.pdb # 19: usage_03122.pdb # 20: usage_03145.pdb # 21: usage_04649.pdb # # Length: 33 # Identity: 8/ 33 ( 24.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 33 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 33 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00452.pdb 1 --VVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 29 usage_01380.pdb 1 --VVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 29 usage_01381.pdb 1 --VVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 29 usage_01383.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_01385.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_01389.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_01391.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_02287.pdb 1 --RGVVVAGRSA-EEGKKVALWAQTLGWPLIGD 30 usage_02288.pdb 1 --RGVVVAGRSA-EEGKKVALWAQTLGWPLIGD 30 usage_02978.pdb 1 KGVFVVGP-IDKKELEQPMVDLAKKLGWPILAD 32 usage_02979.pdb 1 KGVFVVGP-IDKKELEQPMVDLAKKLGWPILAD 32 usage_03101.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03104.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03106.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03108.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03115.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03116.pdb 1 --VVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 29 usage_03118.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03122.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_03145.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 usage_04649.pdb 1 RGVVVAGR-MSA-EEGKKVALWAQTLGWPLIGD 31 V E A LGWP D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################