################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:10:28 2021 # Report_file: c_1014_48.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00089.pdb # 2: usage_00140.pdb # 3: usage_00226.pdb # 4: usage_00267.pdb # 5: usage_00291.pdb # 6: usage_00315.pdb # 7: usage_00345.pdb # 8: usage_00373.pdb # 9: usage_00463.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 54 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 54 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 VAVKMLKPS-AHLTEREALMSELKVLSYL-GNHMNIVNLLGACTIGGPTLVITE 52 usage_00140.pdb 1 ---IKTCKNCTSDSVREKFLQEALTMRQF-D-HPHIVKLIGVITENPVWIIM-E 48 usage_00226.pdb 1 -ALKVESAQ-QP--K-QVLKMEVAVLKKLQG-KDHVCRFIGCGRNEKFNYVVMQ 48 usage_00267.pdb 1 VAVKMLKSD-ATEKDLSDLISEMEMMKMI-GKHKNIINLLGACTQDGPLYVIVE 52 usage_00291.pdb 1 -AIKTLKAG-YTEKQRVDFLGEAGIMGQF-S-HHNIIRLEGVISKYKPMMIITE 50 usage_00315.pdb 1 -AVKTLPEV-CSEQDELDFLMEALIISKF-N-HQNIVRCIGVSLQSLPRFILME 50 usage_00345.pdb 1 -AVKTVNES-ASLRERIEFLNEASVMKGF-T-CHHVVRLLGVVSKGQPTLVVME 50 usage_00373.pdb 1 -AIKTVNEA-ASMRERIEFLNEASVMKEF-N-CHHVVRLLGVVSQGQPTLVIME 50 usage_00463.pdb 1 -AIKTLKPG-TM--SPEAFLQEAQVMKKL-R-HEKLVQLYAVVSE-EPIYIVTE 47 k E g e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################