################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:50 2021 # Report_file: c_1431_54.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00069.pdb # 2: usage_00387.pdb # 3: usage_00388.pdb # 4: usage_00389.pdb # 5: usage_00390.pdb # 6: usage_00443.pdb # 7: usage_00562.pdb # 8: usage_00599.pdb # 9: usage_00672.pdb # 10: usage_01029.pdb # # Length: 62 # Identity: 13/ 62 ( 21.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 62 ( 32.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 62 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00069.pdb 1 TIKQILLGIQELLNEPNIQDPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00387.pdb 1 TIKQILLGIQELLNEPNIQDPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00388.pdb 1 TIKQILLGIQELLNEPNIQDPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00389.pdb 1 TIKQILLGIQELLNEPNIQAPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00390.pdb 1 TIKQILLGIQELLNEPNIQSPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00443.pdb 1 TIKQILLGIQELLNEPNIQDPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00562.pdb 1 -VSSILTSIQSLLDEPNPNSPANSQAAQLYQEN------KREYEKRVSAIVEQSW----- 48 usage_00599.pdb 1 TIKQILLGIQELLNEPNIQDPAQAEAYTIYCQN------RVEYEKRVRAQAKKF------ 48 usage_00672.pdb 1 DVAAILTSIQSLLDEPNPNSPANSLAAQLYQEN------RREYEKRVQQIVEQSWLNF-- 52 usage_01029.pdb 1 -VRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAER 59 IL iq LL EPN PA A Y n EYekrv usage_00069.pdb -- usage_00387.pdb -- usage_00388.pdb -- usage_00389.pdb -- usage_00390.pdb -- usage_00443.pdb -- usage_00562.pdb -- usage_00599.pdb -- usage_00672.pdb -- usage_01029.pdb 60 DG 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################