################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:07:36 2021 # Report_file: c_0154_2.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00007.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00021.pdb # 8: usage_00022.pdb # 9: usage_00027.pdb # 10: usage_00028.pdb # 11: usage_00031.pdb # 12: usage_00032.pdb # 13: usage_00033.pdb # 14: usage_00034.pdb # # Length: 155 # Identity: 46/155 ( 29.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/155 ( 30.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/155 ( 16.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR-GVPSSPDHM 59 usage_00003.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 usage_00007.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPDH-DVPSSIDPI 57 usage_00018.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPAH-DVPSSIDPI 57 usage_00019.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNWPAH-DVPSSIDPI 57 usage_00020.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 usage_00021.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PD---PSSIDPI 54 usage_00022.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 usage_00027.pdb 1 -DPITFAPFKISCEDEQA-RTDYFIRTLLLEFQNESRRLYQFHYVNWPDH---DSSFDSI 55 usage_00028.pdb 1 -DPITFAPFKISCEDEQA-RTDYFIRTLLLEFQNESRRLYQFHYVNWPD------SFDSI 52 usage_00031.pdb 1 QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR-GV--PPDHM 57 usage_00032.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 usage_00033.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 usage_00034.pdb 1 -MQLEFGPFSVSCEAEKR-KSDYIIRTLKVKFNSETRTIYQFHYKNW-PDHDVPSSIDPI 57 F E D RTL F E R YQ Y W s D usage_00002.pdb 60 LAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKM 119 usage_00003.pdb 58 LELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00007.pdb 58 LELIWDVRCY----SVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 113 usage_00018.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00019.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00020.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00021.pdb 55 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 114 usage_00022.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00027.pdb 56 LDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEM 115 usage_00028.pdb 53 LDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEM 112 usage_00031.pdb 58 LAMVEEARRLQGSGPEPLCVHSSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKM 117 usage_00032.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00033.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 usage_00034.pdb 58 LELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREM 117 L R P C H SAGCGRTG C DY LL IP F F M usage_00002.pdb 120 RKQRPAAVQTEEQYRFLYHTVAQMFC--------- 145 usage_00003.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQMDVIR-- 150 usage_00007.pdb 114 RTQRPSLVQTQEQYELVYNAVLE------------ 136 usage_00018.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQMDVIR-- 150 usage_00019.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDK 152 usage_00020.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQM------ 146 usage_00021.pdb 115 RTQRPSLVQTQEQYELVYNAVLELFKRQM------ 143 usage_00022.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQ------- 145 usage_00027.pdb 116 RTQRHSAVQTKEQYELVHRAIAQLFEKQLQ----- 145 usage_00028.pdb 113 RTQRHSAVQTKEQYELVHRAIAQLFEKQL------ 141 usage_00031.pdb 118 RKQRPAAVQTEEQYRFLYHTVAQMF---------- 142 usage_00032.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQM------ 146 usage_00033.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQM------ 146 usage_00034.pdb 118 RTQRPSLVQTQEQYELVYNAVLELFKRQM------ 146 R QR VQT EQY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################