################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:58 2021 # Report_file: c_1306_124.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00401.pdb # 2: usage_00402.pdb # 3: usage_00403.pdb # 4: usage_01437.pdb # 5: usage_01507.pdb # 6: usage_01508.pdb # 7: usage_01668.pdb # 8: usage_01705.pdb # # Length: 45 # Identity: 7/ 45 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 45 ( 17.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 45 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00401.pdb 1 TKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQV---- 41 usage_00402.pdb 1 TKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQV---- 41 usage_00403.pdb 1 TKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQV---- 41 usage_01437.pdb 1 SLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLR 45 usage_01507.pdb 1 TKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQV---- 41 usage_01508.pdb 1 TKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQV---- 41 usage_01668.pdb 1 TKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQV---- 41 usage_01705.pdb 1 SLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREET---- 41 d A ERD G R G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################