################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:17 2021 # Report_file: c_0014_3.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00018.pdb # 7: usage_00019.pdb # 8: usage_00020.pdb # 9: usage_00021.pdb # 10: usage_00022.pdb # 11: usage_00031.pdb # 12: usage_00041.pdb # 13: usage_00044.pdb # 14: usage_00045.pdb # # Length: 267 # Identity: 138/267 ( 51.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/267 ( 59.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/267 ( 1.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 YVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00014.pdb 1 YVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00015.pdb 1 YVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00016.pdb 1 YVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00017.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00018.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00019.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00020.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00021.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00022.pdb 1 YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 60 usage_00031.pdb 1 RVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKG 60 usage_00041.pdb 1 NIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRG 60 usage_00044.pdb 1 RVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKG 60 usage_00045.pdb 1 RVAAKLEMMEPCSSVADRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKG 60 vA K EmM P S DR Mi DAE K lI PG LiEPTSGN G AF AA kG usage_00013.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00014.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00015.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00016.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00017.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00018.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00019.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00020.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00021.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00022.pdb 61 YKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSN 120 usage_00031.pdb 61 YKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFEN 120 usage_00041.pdb 61 YRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDN 120 usage_00044.pdb 61 YKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFEN 120 usage_00045.pdb 61 YKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFEN 120 Yk TMP S ERR AFG EL LTDPAKGM G KA E L TPn MLQQF N usage_00013.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00014.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00015.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00016.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00017.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00018.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00019.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00020.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00021.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00022.pdb 121 PANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSES 180 usage_00031.pdb 121 PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 180 usage_00041.pdb 121 PANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTES 180 usage_00044.pdb 121 PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 180 usage_00045.pdb 121 PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 180 PAN H ETTGPEIW T G D FV GIG GGT G G ylK N nvk yGVEP ES usage_00013.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00014.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00015.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00016.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00017.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00018.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00019.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00020.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00021.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00022.pdb 181 NVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISS 240 usage_00031.pdb 181 AILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISS 240 usage_00041.pdb 181 DILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISS 240 usage_00044.pdb 181 AILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISS 240 usage_00045.pdb 181 AILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISS 240 L GGKPGPH I G G GF P L d V vSS mAr LALKEGL VGISS usage_00013.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00014.pdb 241 GANTVAALRLAQLPENKGKLIVTVHP- 266 usage_00015.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00016.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00017.pdb 241 GANTVAALRLAQLPENKGKLIVTVHP- 266 usage_00018.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00019.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00020.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00021.pdb 241 GANTVAALRLAQLPENKGKLIVTV--- 264 usage_00022.pdb 241 GANTVAALRLAQLPENKGKLIVTVHP- 266 usage_00031.pdb 241 GAAAAAAIKLAQRPENAGKLFVAI--- 264 usage_00041.pdb 241 GAAAAAAIKVAKRPENAGKLIAVVFPS 267 usage_00044.pdb 241 GAAAAAAIKLAQRPENAGKLFVAI--- 264 usage_00045.pdb 241 GAAAAAAIKLAQRPENAGKLFVAI--- 264 GA AA lAq PEN GKL v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################