################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:51 2021 # Report_file: c_1486_254.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00472.pdb # 2: usage_00538.pdb # 3: usage_01166.pdb # 4: usage_01355.pdb # 5: usage_02238.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 39 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 39 ( 59.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00472.pdb 1 ---SPEEKEEWMKSIKASISRDPFYDMLAT--------- 27 usage_00538.pdb 1 ---LWAAQRYGRELRRMSD----------EFVDS--FKK 24 usage_01166.pdb 1 ---ERECQELFRDFLTKTK----VKDKFISDFYK----- 27 usage_01355.pdb 1 ---ERECQELFRDFLTKTK----VKDKFISDFYK--K-- 28 usage_02238.pdb 1 FTSSPRWSRLCQTFHTATELEVGFWQG------LTP--- 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################