################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:14 2021 # Report_file: c_1099_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00005.pdb # 2: usage_00287.pdb # 3: usage_00288.pdb # 4: usage_00289.pdb # 5: usage_00290.pdb # 6: usage_00303.pdb # 7: usage_00305.pdb # 8: usage_00531.pdb # 9: usage_00532.pdb # 10: usage_00612.pdb # 11: usage_00678.pdb # 12: usage_00736.pdb # 13: usage_00737.pdb # 14: usage_00738.pdb # 15: usage_00739.pdb # # Length: 86 # Identity: 49/ 86 ( 57.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 86 ( 68.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 86 ( 29.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00287.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00288.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00289.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00290.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00303.pdb 1 ---------------------EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 39 usage_00305.pdb 1 ---------------------EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 39 usage_00531.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00532.pdb 1 -----------------------ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 37 usage_00612.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00678.pdb 1 --------------------SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 40 usage_00736.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00737.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00738.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 usage_00739.pdb 1 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 60 ELA CFRIFDkNADGfIDiEELgEIlRAtGEHV eEd usage_00005.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMM- 85 usage_00287.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00288.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00289.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00290.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00303.pdb 40 IEDLMKDSDKNNDGRIDFDEFLKMME 65 usage_00305.pdb 40 IEDLMKDSDKNNDGRIDFDEFLKMM- 64 usage_00531.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00532.pdb 38 IEDLMKDSDKNNDGRIDFDEFLKMME 63 usage_00612.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKM-- 84 usage_00678.pdb 41 IESLMKDGDKNNDGRIDFDEFLKMME 66 usage_00736.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00737.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00738.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 usage_00739.pdb 61 IEDLMKDSDKNNDGRIDFDEFLKMME 86 IEdLMKDsDKNNDGRIDFDEFLKM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################