################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:55:14 2021 # Report_file: c_1059_8.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00001.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00035.pdb # 6: usage_00036.pdb # 7: usage_00038.pdb # 8: usage_00039.pdb # 9: usage_00040.pdb # 10: usage_00045.pdb # 11: usage_00130.pdb # 12: usage_00133.pdb # 13: usage_00136.pdb # 14: usage_00147.pdb # 15: usage_00148.pdb # 16: usage_00152.pdb # 17: usage_00153.pdb # 18: usage_00159.pdb # 19: usage_00160.pdb # 20: usage_00164.pdb # 21: usage_00182.pdb # 22: usage_00184.pdb # 23: usage_00189.pdb # 24: usage_00190.pdb # 25: usage_00191.pdb # 26: usage_00228.pdb # 27: usage_00231.pdb # 28: usage_00232.pdb # 29: usage_00235.pdb # # Length: 52 # Identity: 6/ 52 ( 11.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 52 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 52 ( 51.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 QAMDEADYYCQAWD--S---S-----------------SFVFGTGTKVTV-- 28 usage_00029.pdb 1 QAMDEADYYCQAWD--S---S-----------------SFVFGTGTKVT--- 27 usage_00030.pdb 1 EAGDEADYYCQVWD--S---SS---------------DHYVFGTGTKVTV-- 30 usage_00031.pdb 1 EAGDEADYYCQVWD--S---SS---------------DHYVFGTGTKVTV-- 30 usage_00035.pdb 1 QAEDEADYYCWSFA--G---S-----------------YYVFGTGTDVT--- 27 usage_00036.pdb 1 QAEDEADYYCWSFA--G---S-----------------YYVFGTGTDVT--- 27 usage_00038.pdb 1 QAEDEADYYCSSYA--G---ST---------------TFRVFGGGTKLTV-- 30 usage_00039.pdb 1 QAEDEADYYCSSYA--G---ST---------------TFRVFGGGTKLTV-- 30 usage_00040.pdb 1 QAEDEADYYCSSYA--G---ST---------------TFRVFGGGTKLTV-- 30 usage_00045.pdb 1 QAEDEAHYYCWSFA--G---S-----------------YYVFGTGTDVTV-- 28 usage_00130.pdb 1 QAEDEADYYCSSYT--R---RD----------------TYVFGTGTKVTV-- 29 usage_00133.pdb 1 QAEDEADYYCASAT--L---LD----------------TYVFGTGTKVTV-- 29 usage_00136.pdb 1 QAEDEADYYCASAT--L---LD----------------TYVFGTGTKVTV-- 29 usage_00147.pdb 1 QAEDEADYYCSSYE--G---SD----------------NFVFGTGTKVTV-- 29 usage_00148.pdb 1 QAEDEADYYCSSYE--G---SD----------------NFVFGTGTKVTV-- 29 usage_00152.pdb 1 QAEDEADYYCQSAD--S-SGT-----------------YVVFGGGTKLVV-- 30 usage_00153.pdb 1 QAEDEADYYCQSAD--S-SGT-----------------YVVFGGGTKLTV-- 30 usage_00159.pdb 1 QAMDEADYYCQAWD--S---FS----------------TFVFGTGTKVTV-- 29 usage_00160.pdb 1 QAMDEADYYCQAWD--S---FS----------------TFVFGTGTKVT--- 28 usage_00164.pdb 1 QPEDETDYYCAAWD--D-SLD-----------------VAVFGTGTKVTV-- 30 usage_00182.pdb 1 QAEDEADYYCTSYH--P---TK----------------TILFGGGTKLTVLA 31 usage_00184.pdb 1 QAEDDAEYYCSSRD--KSGSR-----------------LSVFGGGTKLTV-- 31 usage_00189.pdb 1 QAEDEADYYCAAYT--V---AS----------------TLLFGGGTKVTV-- 29 usage_00190.pdb 1 QAEDEADYYCAAYT--V---AS----------------TLLFGGGTKVTV-- 29 usage_00191.pdb 1 QAEDEADYYCAAYT--V---AS----------------TLLFGGGTKVT--- 28 usage_00228.pdb 1 KPEDTAIYYCAAGRWRF---GD--------ICHEGSGY-NYWGQGTQVTV-- 38 usage_00231.pdb 1 RLDDTASYYCAADE--D----VTPRVMGVIPH-----A-DHWGQGTLVTVSS 40 usage_00232.pdb 1 LPDDEADYFCMSYL--S---DA----------------SFVFGSGTKVTV-- 29 usage_00235.pdb 1 QAEDEADYYCSSFA--N---S-----------------GPLFGGGTKVTV-- 28 D a YyC G GT t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################