################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:29 2021 # Report_file: c_0751_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00048.pdb # 2: usage_00135.pdb # 3: usage_00242.pdb # 4: usage_00243.pdb # 5: usage_00281.pdb # 6: usage_00292.pdb # # Length: 123 # Identity: 7/123 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/123 ( 17.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/123 ( 37.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 PYFTRNIVILTDSEGNTGVGEVPGGPKITTALENVSDIVVGTKVSDYRNTLLKVQAELD- 59 usage_00135.pdb 1 --ALRSIIEIITE-DSYGLGESYGDSAHLDRLQKAADKIKGLSVYSTNVIYQRCVESLR- 56 usage_00242.pdb 1 ------IVEVVTDEGITGLGETYGDLAHLEQVRAAAARLPGLDVYALHRIYRRVADVVG- 53 usage_00243.pdb 1 ------IVEVVTDEGITGLGETYGDLAHLEQVRAAAARLPGLDVYALHRIYRRVADVVG- 53 usage_00281.pdb 1 ------IIEIESDNGYIGLGESYGDAPALAIQQQVQSQLIGLDPFNLNQLRRIVQTTVA- 53 usage_00292.pdb 1 --ALRAVIQLDTDAGLTGLGETYADTVHLERLQAAAHAIVGRSVFSTNVIRALISDALGG 58 i g GlGE ygd l G v usage_00048.pdb 60 ---KSGEKD------------------ERGAQTFDL----RTGVHVLTAIEAPCLDLLGK 94 usage_00135.pdb 57 ---ND---T-----NG---D--GMGGMVVT-----A----SVADKVFSPFEVACLDLQGK 91 usage_00242.pdb 54 ---AN---IV--------------------------SSRVKTVDRVFAAFEVACLDIQGK 81 usage_00243.pdb 54 ---AN---IVTD-M-HG-----LTG----------SSSRVKTVDRVFAAFEVACLDIQGK 90 usage_00281.pdb 54 ---AH---KPASLA-GAELAPG--------------SHASKAVSNAYSAFEVAFLDLQAR 92 usage_00292.pdb 59 DRTGD---G----------S--GLAGMITS-----A----SVVDRVFSPFEVACLDVQGQ 94 v fEvacLD qg usage_00048.pdb 95 AL- 96 usage_00135.pdb 92 LAG 94 usage_00242.pdb 82 AA- 83 usage_00243.pdb 91 AA- 92 usage_00281.pdb 93 YLN 95 usage_00292.pdb 95 VTG 97 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################