################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:33:04 2021 # Report_file: c_0103_3.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # 5: usage_00022.pdb # 6: usage_00023.pdb # 7: usage_00024.pdb # 8: usage_00025.pdb # 9: usage_00026.pdb # 10: usage_00027.pdb # 11: usage_00028.pdb # 12: usage_00029.pdb # 13: usage_00030.pdb # 14: usage_00031.pdb # 15: usage_00032.pdb # 16: usage_00033.pdb # 17: usage_00034.pdb # 18: usage_00035.pdb # 19: usage_00036.pdb # 20: usage_00050.pdb # 21: usage_00051.pdb # # Length: 174 # Identity: 78/174 ( 44.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/174 ( 44.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/174 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00019.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00020.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANLH--LADVAE 55 usage_00021.pdb 1 ---R---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 53 usage_00022.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00023.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00024.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00025.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00026.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00027.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00028.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00029.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00030.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00031.pdb 1 ---R---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 53 usage_00032.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00033.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00034.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00035.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00036.pdb 1 PEAR---MADYAMGEDKDGQPTRVSPGVLDDEAYGIKTTAADLAKLVRANL-HLADVDAE 56 usage_00050.pdb 1 ----PAARADYAQGYTKDGKPVRT-E-GLWQPAYGVRTTAADLLRFVQAN--G-IHTAPR 51 usage_00051.pdb 1 ----PAARADYAQGYTKDGKPVRT-E-GLWQPAYGVRTTAADLLRFVQAN--G-IHTAPR 51 ADYA G KDG P R L AYG TTAADL V AN usage_00018.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGNGYDMILEPNAAEALEPPQSP 116 usage_00019.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGNGYDMILEPNAAEALEPPQSP 116 usage_00020.pdb 56 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGNGYDMILEPNAAEALEPPQSP 115 usage_00021.pdb 54 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 113 usage_00022.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00023.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEP-QSP 115 usage_00024.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00025.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00026.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00027.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00028.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00029.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00030.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00031.pdb 54 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 113 usage_00032.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00033.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00034.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00035.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEPPQSP 116 usage_00036.pdb 57 LQQAIDATRQGHYRVGDMTQALIWEQYSLPVAPETLRAGQGYDMILEPNAAEALEP-QSP 115 usage_00050.pdb 52 LQRAIERTHTGYFRAGPLTQDLIWEQYPYPVALPTLLAGNAPK-LFDAVPASAIQPPLAP 110 usage_00051.pdb 52 LQRAIERTHTGYFRAGPLTQDLIWEQYPYPVALPTLLAGNAPK-LFDAVPASAIQPPLAP 110 LQ AI T G R G TQ LIWEQY PVA TL AG A A P P usage_00018.pdb 117 RDDVWVNKTGSTNGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00019.pdb 117 RDDVWVNKTGSTNGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGL- 169 usage_00020.pdb 116 RDDVWVNKTGSTNGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGL- 168 usage_00021.pdb 114 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 167 usage_00022.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00023.pdb 116 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 169 usage_00024.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00025.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00026.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00027.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00028.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00029.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00030.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00031.pdb 114 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 167 usage_00032.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00033.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00034.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00035.pdb 117 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 170 usage_00036.pdb 116 RDDVWVNKTGSTQGFGGYIVMLPGKHTGLVMLANKNYPNDARVEAAYRILSGLG 169 usage_00050.pdb 111 NPATWINKTGSTGGFSTYVAFVPAKRIGIV-LANGNVPIEERVKAAYRILGSL- 162 usage_00051.pdb 111 NPATWINKTGSTGGFSTYVAFVPAKRIGIV-LANGNVPIEERVKAAYRILGSL- 162 W NKTGST GF Y P K G V LAN N P RV AAYRIL L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################