################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:59 2021 # Report_file: c_0110_10.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00019.pdb # 2: usage_00167.pdb # 3: usage_00168.pdb # 4: usage_00169.pdb # 5: usage_00198.pdb # 6: usage_00199.pdb # 7: usage_00200.pdb # # Length: 175 # Identity: 41/175 ( 23.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 148/175 ( 84.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/175 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 PQEDGPKLFRSLSIAFMSSADP-IPAAKINWDRDIEYMAGILEN---PNITTGLMGELSR 56 usage_00167.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 usage_00168.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 usage_00169.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 usage_00198.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 usage_00199.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 usage_00200.pdb 1 ---------QWARGTFDQS---DNEHSANTFQQVVDYMLELVARKRVE-PGDDILSELIA 47 qwargtFdqS nehsantfqqvvdYMlelvar e pgddilsELia usage_00019.pdb 57 LRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPA 116 usage_00167.pdb 48 EK-D---GALSDADIAHLGNAVLLFGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 usage_00168.pdb 48 EK-D---GALSDADIAHLGNAVLLFGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 usage_00169.pdb 48 EK-D---GALSDADIAHLGNAVLLFGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 usage_00198.pdb 48 EK-D---GALSDADIAHLGNAVLLFGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 usage_00199.pdb 48 EK-D---GALSDADIAHLGNAVLLLGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 usage_00200.pdb 48 EK-D---GALSDADIAHLGNAVLLFGYETTIVRIDLGTLLLLRNPVQRAQLAEDPGLAPA 103 ek D galSDadiAhlGnavll GyetTivridlgtllLlrnPvqRaqLaEdPgLaPA usage_00019.pdb 117 GVEELLRINLS----FADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF 167 usage_00167.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 usage_00168.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 usage_00169.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 usage_00198.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 usage_00199.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 usage_00200.pdb 104 AVEEILRLGVGGKGSN-ALIPRYAHGDITVGETVIRTGDAVMLAIGAANYDDRAF 157 aVEEiLRlgvg n aliPRyAhgDItVGetviRtGdaVmlaigaANyDdraF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################