################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:08 2021 # Report_file: c_0083_21.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00036.pdb # 2: usage_00046.pdb # 3: usage_00072.pdb # 4: usage_00151.pdb # 5: usage_00152.pdb # 6: usage_00153.pdb # 7: usage_00260.pdb # 8: usage_00399.pdb # 9: usage_00408.pdb # # Length: 274 # Identity: 27/274 ( 9.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/274 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 110/274 ( 40.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 GGEFLKYMEAFKPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 42 usage_00046.pdb 1 ------YMEAFKPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 36 usage_00072.pdb 1 ----------FKPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 32 usage_00151.pdb 1 --------------------NYA------------------EYQVCLAAVGLVGDLCRAL 22 usage_00152.pdb 1 -----------KPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 31 usage_00153.pdb 1 ----KDCYPAVQKTTLVIMERL-QQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKV 55 usage_00260.pdb 1 --------QKTTLVIMERLQQV----LQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKV 48 usage_00399.pdb 1 ------YMEAFKPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 36 usage_00408.pdb 1 ----------FKPFLGIGLKNYA------------------EYQVCLAAVGLVGDLCRAL 32 R usage_00036.pdb 43 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 94 usage_00046.pdb 37 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 88 usage_00072.pdb 33 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 84 usage_00151.pdb 23 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 74 usage_00152.pdb 32 -QSNILPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 83 usage_00153.pdb 56 QHQDALQISDVVMASLLRMFQSTAGS-GGV------QEDALMAVSTLVEVLGGEFLKYME 108 usage_00260.pdb 49 QHQDALQISDVVMASLLRMFQST-------AGSGGVQEDALMAVSTLVEVLGGEFLKYME 101 usage_00399.pdb 37 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 88 usage_00408.pdb 33 -QSNIIPFCDEVMQLLLENLGNE-NVHRSV------KPQILSVFGDIALAIGGEFKKYLE 84 D VM LL L GGEF KY E usage_00036.pdb 95 VVLNTLQQASQAQV----D-MVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 149 usage_00046.pdb 89 VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 148 usage_00072.pdb 85 VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 144 usage_00151.pdb 75 VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 134 usage_00152.pdb 84 VVLNTLQQASQAQVDKSDFDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 143 usage_00153.pdb 109 AFKPFLGIGLKNYA----------EYQVCLAAVGLVGDLCRAL----------QSNILPF 148 usage_00260.pdb 102 AFKPFLGIGLKNYA----------EYQVCLAAVGLVGDLCRAL----------QSNIIPF 141 usage_00399.pdb 89 VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 148 usage_00408.pdb 85 VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPR 144 L L P usage_00036.pdb 150 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 209 usage_00046.pdb 149 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 208 usage_00072.pdb 145 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 204 usage_00151.pdb 135 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 194 usage_00152.pdb 144 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 203 usage_00153.pdb 149 CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEV---VLNTLQQASQA 205 usage_00260.pdb 142 CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEV---VLNTLQQASQA 198 usage_00399.pdb 149 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 208 usage_00408.pdb 145 VEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRS 204 G E V GD A G K E L usage_00036.pdb 210 K-----------TNKAKTLATWATKELRKLKNQA 232 usage_00046.pdb 209 K-----------TNKAKTLATWATKELRKLKN-- 229 usage_00072.pdb 205 K-----------TNKAKTLARWATKELRKLKN-- 225 usage_00151.pdb 195 K-----------TNKAKTLATWATKELRKLKNQA 217 usage_00152.pdb 204 K-----------TNKAKTLATWATKELRKLKN-- 224 usage_00153.pdb 206 QVDKSDFDMVDYLNELRESCLEAYTGIVQGLKG- 238 usage_00260.pdb ---------------------------------- usage_00399.pdb 209 K-----------TNKAKTLATWATKELRKLK--- 228 usage_00408.pdb 205 K-----------TNKAKTLARWATKELRKLKNQ- 226 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################