################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:52 2021 # Report_file: c_1456_22.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00139.pdb # 2: usage_00184.pdb # 3: usage_00250.pdb # 4: usage_00251.pdb # 5: usage_00253.pdb # 6: usage_00254.pdb # 7: usage_00255.pdb # 8: usage_00607.pdb # 9: usage_01127.pdb # 10: usage_01221.pdb # 11: usage_01514.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 41 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 41 ( 63.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 HSVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 29 usage_00184.pdb 1 HSVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 29 usage_00250.pdb 1 -SVAVIGAPF-SQGQKR----KGVE----H----------- 20 usage_00251.pdb 1 -SVAVIGAPF-SQGQKR----KGVE----H----------- 20 usage_00253.pdb 1 -SVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 28 usage_00254.pdb 1 HSVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 29 usage_00255.pdb 1 HSVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 29 usage_00607.pdb 1 -D-VVHVM-L-DG--SR----SKIFDKDST-FGSVGVH-NL 29 usage_01127.pdb 1 -PIEIIGAPF-SKG-PR----GGVE----KGPAALRKAG-- 28 usage_01221.pdb 1 -HMIELSLIGIG--TGNPRHITGQA----VDAMNA------ 28 usage_01514.pdb 1 HSVAVIGAPF-SQGQKR----KGVE----HGPAAIREA--- 29 r g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################