################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:48 2021 # Report_file: c_1218_25.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00058.pdb # 2: usage_00063.pdb # 3: usage_00189.pdb # 4: usage_00669.pdb # 5: usage_00769.pdb # 6: usage_00770.pdb # 7: usage_00771.pdb # # Length: 76 # Identity: 18/ 76 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/ 76 ( 53.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/ 76 ( 46.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00058.pdb 1 LLI----NTEGAIKLADF----------------------TLWYRAPEILLGCK--YYST 32 usage_00063.pdb 1 LLI----NTEGAIKLADFGL----ARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYST 50 usage_00189.pdb 1 LLI----NTEGAIKLADFGL----ARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYST 50 usage_00669.pdb 1 ---NFLIV-DGMLKLIDFGIANQG----------------TVNYMPPEAIKD--MSKISP 38 usage_00769.pdb 1 LLI----NTEGAIKLADFGL----AR------------VVTLWYRAPEILLGCK--YYST 38 usage_00770.pdb 1 LLI----NTEGAIKLADFGL----ARAF---------EVVTLWYRAPEILLGCK--YYST 41 usage_00771.pdb 1 LLI----NTEGAIKLADFGL----ARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYST 50 n eGaiKLaDF TlwYraPEillg yySt usage_00058.pdb 33 AVDIWSLGCIFAEMV- 47 usage_00063.pdb 51 AVDIWSLGCIFAEMVT 66 usage_00189.pdb 51 AVDIWSLGCIFAEMVT 66 usage_00669.pdb 39 KSDVWSLGCILYYMT- 53 usage_00769.pdb 39 AVDIWSLGCIFAEMV- 53 usage_00770.pdb 42 AVDIWSLGCIFAEMV- 56 usage_00771.pdb 51 AVDIWSLGCIFAEMV- 65 avDiWSLGCIfaeMv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################