################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:02:19 2021 # Report_file: c_1021_4.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00584.pdb # 2: usage_00585.pdb # 3: usage_00586.pdb # 4: usage_00587.pdb # # Length: 78 # Identity: 70/ 78 ( 89.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/ 78 ( 89.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 78 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00584.pdb 1 PTIVNISSILHSGKMKVPGTSVYSASKAALSRFTEVLAAEMEPRNIRCFTISPGL-VKGT 59 usage_00585.pdb 1 PTIVNISSILHSGKMKVPGTSVYSASKAALSRFTEVLAAEMEPRNIRCFTISPGLV---- 56 usage_00586.pdb 1 PTIVNISSILHSGKMKVPGTSVYSASKAALSRFTEVLAAEMEPRNIRCFTISPG------ 54 usage_00587.pdb 1 PTIVNISSILHSGKMKVPGTSVYSASKAALSRFTEVLAAEMEPRNIRCFTISPGL----- 55 PTIVNISSILHSGKMKVPGTSVYSASKAALSRFTEVLAAEMEPRNIRCFTISPG usage_00584.pdb 60 DSGTSAPAEIAEEVWSLY 77 usage_00585.pdb 57 -SGTSAPAEIAEEVWSLY 73 usage_00586.pdb 55 --GTSAPAEIAEEVWSLY 70 usage_00587.pdb 56 --GTSAPAEIAEEVWSLY 71 GTSAPAEIAEEVWSLY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################