################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:06 2021 # Report_file: c_1306_34.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00095.pdb # 2: usage_00096.pdb # 3: usage_00437.pdb # 4: usage_00438.pdb # 5: usage_00578.pdb # 6: usage_00579.pdb # 7: usage_00580.pdb # 8: usage_00581.pdb # 9: usage_00582.pdb # 10: usage_00583.pdb # 11: usage_01642.pdb # # Length: 43 # Identity: 2/ 43 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 43 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 43 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00095.pdb 1 NDRIVKFVKKTLRLIADLDIPVQRGTFVEYRN----GMINVSP 39 usage_00096.pdb 1 NDRIVKFVKKTLRLIADLDIPVQRGTFVEYRN----GMINVSP 39 usage_00437.pdb 1 -ELLQDLINFCLSY-ALLRLPKKRGTFIEFRN----GLNISP- 36 usage_00438.pdb 1 -ELLQDLINFCLSY-ALLRLPKKRGTFIEFRN----GLNISP- 36 usage_00578.pdb 1 NEKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 39 usage_00579.pdb 1 NEKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 39 usage_00580.pdb 1 NEKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 39 usage_00581.pdb 1 NEKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 39 usage_00582.pdb 1 NEKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 39 usage_00583.pdb 1 -EKVVAFVKKCLHLIADLDIPVQRGTFVEFRN----GMFNVSP 38 usage_01642.pdb 1 ------PLEYVLRLRS-WAHVPCDP-YVRVQNTGVSVLFQGFF 35 L a l p rg f e rN g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################