################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:38 2021 # Report_file: c_0406_49.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00269.pdb # 2: usage_00274.pdb # 3: usage_00275.pdb # 4: usage_00424.pdb # 5: usage_00436.pdb # # Length: 87 # Identity: 11/ 87 ( 12.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 87 ( 46.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 87 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00269.pdb 1 FTVTAAKGTTVKMECFALGNPVPTITWMKVN-GYIPSKSRLRKSQAVLEIPNLQLDDAGI 59 usage_00274.pdb 1 ETIQAAKDSSIKLECFALGNPVPDISWKRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGF 60 usage_00275.pdb 1 ETIQAAKDSSIKLECFALGNPVPDISWKRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGF 60 usage_00424.pdb 1 SRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHS 60 usage_00436.pdb 1 ETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGS 60 t A k kleCfalGnpvP i W p K ks Leip q d g usage_00269.pdb 60 YECTAENSRGKNSFRGQLQIFT----- 81 usage_00274.pdb 61 YECIAGNLRGRNLAKGQLIFYA----- 82 usage_00275.pdb 61 YECIAGNLRGRNLAKGQLIFYA----- 82 usage_00424.pdb 61 YLCTATCESRKLEKGIQVEIYS----- 82 usage_00436.pdb 61 YECVAENSRGKNVAKGQLTFYAQPNWV 87 YeC A n rg n gQl y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################