################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:53:30 2021 # Report_file: c_0275_9.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00012.pdb # 6: usage_00014.pdb # 7: usage_00015.pdb # 8: usage_00016.pdb # 9: usage_00040.pdb # 10: usage_00049.pdb # 11: usage_00055.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # 14: usage_00066.pdb # 15: usage_00105.pdb # 16: usage_00110.pdb # 17: usage_00121.pdb # 18: usage_00128.pdb # 19: usage_00154.pdb # 20: usage_00155.pdb # 21: usage_00196.pdb # 22: usage_00197.pdb # 23: usage_00222.pdb # # Length: 80 # Identity: 42/ 80 ( 52.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 80 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 80 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGNTEKGDI 58 usage_00009.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGNTEKGDI 58 usage_00010.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI 58 usage_00011.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI 58 usage_00012.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00014.pdb 1 --AVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 58 usage_00015.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00016.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00040.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00049.pdb 1 --AVTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGAGNLQIGDV 58 usage_00055.pdb 1 ---VTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGAGNLQIGDV 57 usage_00061.pdb 1 -AAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 59 usage_00062.pdb 1 -AAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 59 usage_00066.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00105.pdb 1 -AAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 59 usage_00110.pdb 1 -AAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 59 usage_00121.pdb 1 --GITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEV 58 usage_00128.pdb 1 EAAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDI 60 usage_00154.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00155.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDI 58 usage_00196.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI 58 usage_00197.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI 58 usage_00222.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI 58 vTQSPR KV vTG VTLsC QTn H MYWYRQDtGHGLRLIHYSY Gd usage_00008.pdb 59 PDGYKASRPSQEQFSLILES 78 usage_00009.pdb 59 PDGYEASRPSHEQFSLI--- 75 usage_00010.pdb 59 PDGYKASRPSHEQFSLILVS 78 usage_00011.pdb 59 PDGYEASRPSQEQFSLILVS 78 usage_00012.pdb 59 PDGYKASRPSQEQFSLI--- 75 usage_00014.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00015.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00016.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00040.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00049.pdb 59 PDGYKATRTTQEDFFLLLEL 78 usage_00055.pdb 58 PDGYKATRTTQEDFFLLLEL 77 usage_00061.pdb 60 PDGYKASRPSQENFSLILEL 79 usage_00062.pdb 60 PDGYKASRPSQENFSLILEL 79 usage_00066.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00105.pdb 60 PDGYKASRPSQENFSLILEL 79 usage_00110.pdb 60 PDGYKASRPSQENFSLILEL 79 usage_00121.pdb 59 SDGYSVSRSKTEDFLLTLES 78 usage_00128.pdb 61 PDGYKASRPSQENFSLILEL 80 usage_00154.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00155.pdb 59 PDGYKASRPSQENFSLILEL 78 usage_00196.pdb 59 PDGYEASRPSHEQFSLILVS 78 usage_00197.pdb 59 PDGYEASRPSQEQFSLILVS 78 usage_00222.pdb 59 PDGYEASRPSHEQFSLI--- 75 pDGY a R E F L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################