################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:40 2021 # Report_file: c_1200_347.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00950.pdb # 2: usage_00951.pdb # 3: usage_00952.pdb # 4: usage_03067.pdb # 5: usage_03122.pdb # 6: usage_03709.pdb # 7: usage_04016.pdb # 8: usage_04208.pdb # # Length: 65 # Identity: 0/ 65 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 65 ( 1.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 65 ( 73.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00950.pdb 1 TSTFDCVVAD-P------S------------YIEYQLTPTN------------T--NRSV 27 usage_00951.pdb 1 TSTFDCVVAD-P------S------------YIEYQLTPTN------------T--NRSV 27 usage_00952.pdb 1 ----DCVVAD-P----RKG-SKM---YGLKSYIEYQLTPTN------------T--NRSV 33 usage_03067.pdb 1 ----ACSVEDP---------------------ISYKLTPTH------------A--ASPV 21 usage_03122.pdb 1 ----LNATFQ-PAKIG--HP----------HGLQVTYLK--------------DNSTRNI 29 usage_03709.pdb 1 ----KKLVKE-G------------------PFGTLVYTIKQMKMYRGFTKMPHV-Q--YI 34 usage_04016.pdb 1 ----DCVVAD-P----RKG-SKM---YGLKSYIEYQLTPTN------------T--NRSV 33 usage_04208.pdb 1 ----RVIVSN-K----REK-VINDRE-----RYEASFRPEN------------G--GLEV 31 v usage_00950.pdb 28 NHR-- 30 usage_00951.pdb 28 NHR-- 30 usage_00952.pdb 34 N---- 34 usage_03067.pdb 22 YRR-- 24 usage_03122.pdb 30 FIYHE 34 usage_03709.pdb 35 HTE-- 37 usage_04016.pdb 34 NHR-- 36 usage_04208.pdb 32 VFR-- 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################