################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:27 2021 # Report_file: c_1076_155.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00003.pdb # 2: usage_00183.pdb # 3: usage_00251.pdb # 4: usage_00264.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00529.pdb # 8: usage_00530.pdb # 9: usage_00566.pdb # 10: usage_00823.pdb # 11: usage_00849.pdb # 12: usage_00898.pdb # 13: usage_01051.pdb # 14: usage_01052.pdb # 15: usage_01067.pdb # 16: usage_01413.pdb # 17: usage_01414.pdb # 18: usage_01415.pdb # 19: usage_01416.pdb # 20: usage_01450.pdb # 21: usage_01550.pdb # # Length: 70 # Identity: 8/ 70 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 70 ( 62.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 70 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWRDKRHLTTLVKEMKAEFVREAQAGTEQ 60 usage_00183.pdb 1 -TQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWRDKRHLTTLVKEMKAEFVREAQAGTEQ 59 usage_00251.pdb 1 -TQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 59 usage_00264.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_00265.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTALVKEMKAEFAREAQAGTER 60 usage_00266.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTALVKEMKAEFAREAQAGTER 60 usage_00529.pdb 1 NTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 60 usage_00530.pdb 1 -TQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 59 usage_00566.pdb 1 ----AQSELERTLANTRDAGFDLIEFSY--LDPADV-DIGRLAKRIADL----------G 43 usage_00823.pdb 1 --QSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWRDKRHLTTLVKEMKAEFVREAQAGTEQ 58 usage_00849.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_00898.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_01051.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_01052.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_01067.pdb 1 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTEQ 60 usage_01413.pdb 1 NTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 60 usage_01414.pdb 1 NTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 60 usage_01415.pdb 1 NTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 60 usage_01416.pdb 1 NTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQ 60 usage_01450.pdb 1 -TQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTALVKEMKAEFAREAQAGTER 59 usage_01550.pdb 1 --QSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWRDKRHLTTLVKEMKAEFVREAQAGTEQ 58 rrtfiksvppflRthGFDgldlaw pg rDk h t L Kemkae usage_00003.pdb 61 LLLSAAVTAG 70 usage_00183.pdb 60 LLLSAAVTAG 69 usage_00251.pdb 60 LLLSAAVSAG 69 usage_00264.pdb 61 LLLSAAVSAG 70 usage_00265.pdb 61 LLLSAAVSAG 70 usage_00266.pdb 61 LLLSAAVSAG 70 usage_00529.pdb 61 LLLSAALSAG 70 usage_00530.pdb 60 LLLSAALSAG 69 usage_00566.pdb 44 LGVAISIG-- 51 usage_00823.pdb 59 LLLSAAVTAG 68 usage_00849.pdb 61 LLLSAAVSAG 70 usage_00898.pdb 61 LLLSAAVSAG 70 usage_01051.pdb 61 LLLSAAVSAG 70 usage_01052.pdb 61 LLLSAAVSAG 70 usage_01067.pdb 61 LLLSAAVSAG 70 usage_01413.pdb 61 LLLSAALSAG 70 usage_01414.pdb 61 LLLSAALSAG 70 usage_01415.pdb 61 LLLSAALSAG 70 usage_01416.pdb 61 LLLSAALSAG 70 usage_01450.pdb 60 LLLSAAVSAG 69 usage_01550.pdb 59 LLLSAAVTAG 68 Lllsaa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################