################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:18 2021 # Report_file: c_0688_37.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00029.pdb # 5: usage_00490.pdb # 6: usage_00491.pdb # # Length: 53 # Identity: 16/ 53 ( 30.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 53 ( 64.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 53 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 ------WAFDDGNDVWMGRTINETSRLGYETFKVIEGWSNPKSKLQINRQVIV 47 usage_00020.pdb 1 ------WAFDDGNDVWMGRTINETSRLGYETFKVIEGWSNPKSKLQINRQVIV 47 usage_00021.pdb 1 NNGVKGFSYLDGGNTWLGRTISIASRSGYEMLKVPNALTDDRSKPTQGQT-IV 52 usage_00029.pdb 1 -----GWAFDNGNDLWMGRTISKESRSGYETFKVIGGWSTPNSKSQVNRQVIV 48 usage_00490.pdb 1 ----KGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIV 49 usage_00491.pdb 1 ----KGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIV 49 wafd Gnd WmGRTI R GYEtfKVi gws p SK q nrq IV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################