################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:13:16 2021 # Report_file: c_0399_15.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00096.pdb # 2: usage_00106.pdb # 3: usage_00107.pdb # 4: usage_00108.pdb # 5: usage_00141.pdb # 6: usage_00142.pdb # 7: usage_00143.pdb # 8: usage_00144.pdb # 9: usage_00160.pdb # 10: usage_00161.pdb # 11: usage_00162.pdb # 12: usage_00163.pdb # 13: usage_00164.pdb # 14: usage_00165.pdb # # Length: 99 # Identity: 54/ 99 ( 54.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/ 99 ( 80.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 99 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 ---GINVNSIESIKTVPWNWTNGEVANVFISYEASTKSLTASLVYPSLETSFIIDAIVDV 57 usage_00106.pdb 1 ---GIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 57 usage_00107.pdb 1 THIGIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 60 usage_00108.pdb 1 ---GIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 57 usage_00141.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00142.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00143.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00144.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00160.pdb 1 ---GIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 57 usage_00161.pdb 1 ---GIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 57 usage_00162.pdb 1 ---GIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDL 57 usage_00163.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00164.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 usage_00165.pdb 1 ---GFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDL 57 G dVNSI SIKTVkW laNGEaAkVlItY s KlLvA LVYPSskTSFIl d VDl usage_00096.pdb 58 KIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESNLP- 95 usage_00106.pdb 58 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLS- 95 usage_00107.pdb 61 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLSF 99 usage_00108.pdb 58 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLS- 95 usage_00141.pdb 58 SSVLPEWVRVGFSAATGASGGKIETHDVFSWSFASKLA- 95 usage_00142.pdb 58 SSVLPEWVRVGFSAATGASKGYIETHDVFSWSFASKLA- 95 usage_00143.pdb 58 SSVLPEWVRVGFSAATGASGGKIETHDVFSWSFASKLA- 95 usage_00144.pdb 58 SSVLPEWVRVGFSAATGASKGYIETHDVFSWSFASKLA- 95 usage_00160.pdb 58 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLS- 95 usage_00161.pdb 58 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLS- 95 usage_00162.pdb 58 KSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLS- 95 usage_00163.pdb 58 SSVLPEWVRVGFSAATGASKGYIETHDVFSWSFASKLA- 95 usage_00164.pdb 58 SSVLPEWVRVGFSAATGASGGKIETHDVFSWSFASKLA- 95 usage_00165.pdb 58 SSVLPEWVRVGFSAATGASKGYIETHDVFSWSFASKLA- 95 sVLPEWV GFSAaTGas G ieThDVfSWSFaSkL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################