################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:11 2021 # Report_file: c_0677_103.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00081.pdb # 2: usage_00334.pdb # 3: usage_00576.pdb # 4: usage_01065.pdb # 5: usage_01134.pdb # 6: usage_01300.pdb # 7: usage_01369.pdb # 8: usage_01496.pdb # 9: usage_01542.pdb # 10: usage_01545.pdb # # Length: 68 # Identity: 7/ 68 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 68 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 68 ( 58.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00081.pdb 1 ----QESGPGLVKPYQSLSLSCTVTGY-----SI-TSDYAWNWIRQFPGNKLEWMGYITY 50 usage_00334.pdb 1 QLHLQESGPGLVKPPETLSLTCSVSGA-----SI-N-DAYWSWIRQSPGKRPEWVGYVHH 53 usage_00576.pdb 1 -VQLVESGPGLVKPSDILSLTCAVSGY-----SI-SSNYYWGWIRQPPGKGLEWIGSIYH 53 usage_01065.pdb 1 --QLQESGPGLVKPSETLSLTCTVSGG-----SI-S-SYYWSWIRQPPGKGLEWIGYIYY 51 usage_01134.pdb 1 --QLVESGPGLVKPSQTLSLTCTVSGA-----SISSGGYFWSWIRQHPGKGLEWIGNIY- 52 usage_01300.pdb 1 ---------------ESLRLSCVGSGSSFGESTL--SYYAVSWVRQAPGKGLEWLSIINA 43 usage_01369.pdb 1 QVQLQESGPGLVKPSETLSVTCSVSGD-----SM-N-NYYWTWIRQSPGKGLEWIGYISD 53 usage_01496.pdb 1 -VQLQESGPGLVAPSQSLSITCTVSGF-----SL-T-GYGVNWVRQPPGKGLEWLG---- 48 usage_01542.pdb 1 DVQLRESGPDLVTPSQSLSLTCTVTGY-----SI-TSGYSWHWNRQFPGNKLEW------ 48 usage_01545.pdb 1 DIQLQESGPSLVKPSQTLSLTCSVTGD-----SITS-DY---SIRKFPGNRLEY------ 45 Ls C v G s y w Rq PG lEw usage_00081.pdb -------- usage_00334.pdb -------- usage_00576.pdb -------- usage_01065.pdb -------- usage_01134.pdb -------- usage_01300.pdb 44 GGGDIDYA 51 usage_01369.pdb -------- usage_01496.pdb -------- usage_01542.pdb -------- usage_01545.pdb -------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################