################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:06:55 2021 # Report_file: c_0109_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00017.pdb # 2: usage_00018.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00047.pdb # 6: usage_00063.pdb # 7: usage_00065.pdb # 8: usage_00071.pdb # 9: usage_00072.pdb # 10: usage_00075.pdb # 11: usage_00078.pdb # 12: usage_00087.pdb # 13: usage_00113.pdb # 14: usage_00114.pdb # # Length: 213 # Identity: 84/213 ( 39.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 181/213 ( 85.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/213 ( 13.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -----PHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 55 usage_00018.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00036.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00037.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00047.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00063.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00065.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00071.pdb 1 ----------------------TFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 38 usage_00072.pdb 1 ----------------------TFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 38 usage_00075.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00078.pdb 1 -----PHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 55 usage_00087.pdb 1 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 60 usage_00113.pdb 1 ----------------------TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVG 38 usage_00114.pdb 1 ----IPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVN 56 TfaeaKeAlyDYLiPiIEqRrqkPGtDaiSivangqVn usage_00017.pdb 56 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIQRPERIPAACEELL 115 usage_00018.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIQRPERIPAACEELL 120 usage_00036.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00037.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00047.pdb 61 GRPITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00063.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIQRPERIPAACEELL 120 usage_00065.pdb 61 GRPITSDEAKRMCGLLLLGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00071.pdb 39 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 98 usage_00072.pdb 39 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 98 usage_00075.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00078.pdb 56 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIQRPERIPAACEELL 115 usage_00087.pdb 61 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 120 usage_00113.pdb 39 GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELM 98 usage_00114.pdb 57 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELL 116 GRPiTsDEAkRMCg LL GGLDTVvnflsfsmefLAksPEhrqeLi RPerIPAAceELl usage_00017.pdb 116 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 172 usage_00018.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 177 usage_00036.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 177 usage_00037.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 177 usage_00047.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQK---VS 177 usage_00063.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 177 usage_00065.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQK---VS 177 usage_00071.pdb 99 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 155 usage_00072.pdb 99 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 155 usage_00075.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQK---VS 177 usage_00078.pdb 116 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---VS 172 usage_00087.pdb 121 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQK---VS 177 usage_00113.pdb 99 RRYPTVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPI-R 157 usage_00114.pdb 117 RRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQK---VS 173 RRfslVAdgRiltsDyefhGVqlkKGDqilLPqmLsgLDerena PmhVdFsRqk s usage_00017.pdb 173 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 203 usage_00018.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00036.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00037.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00047.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00063.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00065.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 208 usage_00071.pdb 156 HTTFGHGSHLCLGQHLARREIIVTLKEWLTRI- 187 usage_00072.pdb 156 HTTFGHGSHLCLGQHLARREIIVTLKEWLTRI- 187 usage_00075.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTRIP 210 usage_00078.pdb 173 HTTFGHGSHLCLGQHLARREIIVTLKEWLTR-- 203 usage_00087.pdb 178 HTTFGHGSHLCLGQHLARREIIVTLKEWLTRIP 210 usage_00113.pdb 158 HTTMGVGAHRCVGAGLARMEVIVFLREWLGG-- 188 usage_00114.pdb 174 HTTFGHGSHLCLGQHLARREIIVTLKEWLTRIP 206 HTTfGhGsHlClGqhLARrEiIVtLkEWLtr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################