################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:17:40 2021 # Report_file: c_1201_57.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00050.pdb # 2: usage_00085.pdb # 3: usage_00267.pdb # 4: usage_00268.pdb # 5: usage_00317.pdb # 6: usage_00321.pdb # 7: usage_00322.pdb # 8: usage_00483.pdb # 9: usage_00508.pdb # 10: usage_01037.pdb # 11: usage_01038.pdb # 12: usage_01039.pdb # 13: usage_01041.pdb # 14: usage_01042.pdb # 15: usage_01043.pdb # 16: usage_01135.pdb # 17: usage_01599.pdb # 18: usage_01728.pdb # 19: usage_01729.pdb # # Length: 37 # Identity: 6/ 37 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 37 ( 59.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 37 ( 37.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 --SKIEIKLSDIPEGKNMAFKW--RGKPLFVR----- 28 usage_00085.pdb 1 --SKIEIKLSDIPEGKNMAFKW--RGKPLFVR----- 28 usage_00267.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVR----- 28 usage_00268.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVR----- 28 usage_00317.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVR----- 28 usage_00321.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_00322.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_00483.pdb 1 AMSKIEIKLSDIPEGKNMAFKW--RGKPLFVRHRTK- 34 usage_00508.pdb 1 --SKIEIKLSDIPEGKNMAFKW--RGKPLFVRHRTK- 32 usage_01037.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_01038.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVR----- 28 usage_01039.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_01041.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_01042.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVR----- 28 usage_01043.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_01135.pdb 1 ---KIEIKLSDIPEGKNMAFKW--RGKPLFVR----- 27 usage_01599.pdb 1 ---VKTF---DTPTHPNSLALSADG-KTLYVSVKQ-K 29 usage_01728.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 usage_01729.pdb 1 --SKIEIKLSDIPEGKNVAFKW--RGKPLFVRHRTQ- 32 kiei DiPegkN afkw r KpLfVr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################