################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:57 2021 # Report_file: c_0131_9.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00069.pdb # 4: usage_00112.pdb # # Length: 203 # Identity: 48/203 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 162/203 ( 79.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/203 ( 20.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 ---AVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDI----DSGIYVKPDLPE 53 usage_00029.pdb 1 ---AVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDI----DSGIYVKPDLPE 53 usage_00069.pdb 1 ---YVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGD-QRNGEGAMYVPDDLLP 56 usage_00112.pdb 1 QLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIG-------------PDLPE 47 aVtTGYmgtaSqikilaewltaLrkdhPdLlimvDPViG pDLpe usage_00028.pdb 54 AYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLS-DTLKWVVV-TS----- 106 usage_00029.pdb 54 AYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLS-DTLKWVVV-TS----- 106 usage_00069.pdb 57 VYREKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSM-GPDTVVITSSNLLSP 115 usage_00112.pdb 48 AYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLS-DTLKWVVV-TS--ASG 103 aYRqyllPlAqgITPNiFElEiLTGkncrdldsAiaaaksLlS tlkwVVv tS usage_00028.pdb 107 ---QEMQVVVVTA------DSVNVISHSRVKTDLKGTGDLFCAQLISGLLKG--KALTDA 155 usage_00029.pdb 107 ----EMQVVVVTA------DSVNVISHSRVKTDLKGTGDLFCAQLISGLLKG--KALTDA 154 usage_00069.pdb 116 RGSDYLMALGSQRTRGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPN-NLKVA 174 usage_00112.pdb 104 N--QEMQVVVVTA------DSVNVISHSRVKTDLKGTGDLFCAQLISGLLKG--KALTDA 153 emqvvvvta dsvnvishsrVktdlkGTGDLFcAqLisgllKg aLtdA usage_00028.pdb 156 VHRAGLRVLEVMRYTQQHE---- 174 usage_00029.pdb 155 VHRAGLRVLEVMRYTQQHE---- 173 usage_00069.pdb 175 CEKTVSAMHHVLQRTIKCAKAKS 197 usage_00112.pdb 154 VHRAGLRVLEVMRYTQQHE---- 172 vhraglrvleVmryTqqhe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################