################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:30 2021 # Report_file: c_0974_98.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00011.pdb # 2: usage_00550.pdb # 3: usage_01038.pdb # 4: usage_01085.pdb # 5: usage_01180.pdb # # Length: 53 # Identity: 2/ 53 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 53 ( 20.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 53 ( 20.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ---TDLVE-RKDSLTFK-ANF--L-EQALDLPVTGKYNATNA-IASYVALQEG 44 usage_00550.pdb 1 ----NLYIRNNGYYCYR-DPR--T-GKEFGL-GRDRRIAITEAIQANIELFSG 44 usage_01038.pdb 1 ---TDLVE-RKDSLTFK-ANF--L-EQALDLPVTGKYNATNA-IASYVALQEG 44 usage_01085.pdb 1 YRIEDYEQ-TGFQGHYT-VICPNNERINVLLNVPGKHNALNATAALAVAKEEG 51 usage_01180.pdb 1 ----DLQRDARGCMGFRLQGV--AGEAQVQLNLLGRHNVANALAAAAAAHALG 47 dl L g na na a a G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################