################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:27 2021 # Report_file: c_1232_92.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00605.pdb # 2: usage_00606.pdb # 3: usage_00633.pdb # 4: usage_00934.pdb # 5: usage_00944.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 38 ( 10.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 38 ( 42.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00605.pdb 1 -LVYELDEDLQPVRHYY-LL---DEAELKAKMEAVA-- 31 usage_00606.pdb 1 -LVYELDEDLQPVRHYY-LL---DEAELKAKMEA---- 29 usage_00633.pdb 1 -LVYELDENLKPIKHYY-LL---DSEELKKKM------ 27 usage_00934.pdb 1 -EVIEHS-S--GLKLVR-E-WDVLEQACKEDLEELVSM 32 usage_00944.pdb 1 LESQTKLVNGQSH-ISLSKA---EFQDALEKLN----- 29 v e k k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################