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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:49:18 2021
# Report_file: c_0660_4.html
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#====================================
# Aligned_structures: 8
#   1: usage_00005.pdb
#   2: usage_00016.pdb
#   3: usage_00017.pdb
#   4: usage_00018.pdb
#   5: usage_00019.pdb
#   6: usage_00025.pdb
#   7: usage_00029.pdb
#   8: usage_00034.pdb
#
# Length:         66
# Identity:        8/ 66 ( 12.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     13/ 66 ( 19.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/ 66 ( 27.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00005.pdb         1  --LTCVTSKS-IFGITTENCPDGQNLCFKRWQYI---SP-RMYDFTRGCAATCPKAEYRD   53
usage_00016.pdb         1  LTCVKSNSI-W-F-PTSEDCPDGQNLCFKRWQYI---SP-RMYDFTRGCAATCPKAE-RD   52
usage_00017.pdb         1  LTCVKSNSI-W-F-PTSEDCPDGQNLCFKRWQYI---SP-RMYDFTRGCAATCPKAE-RD   52
usage_00018.pdb         1  --RLCLSDYS-IFSETIEICPEGHNYCFKKFPK----GITRLPWVIRGCAATCPKPEAQV   53
usage_00019.pdb         1  --RLCLSDYS-IFSETIEICPEGHNYCFKKFPK----GITRLPWVIRGCAATCPKPEAQV   53
usage_00025.pdb         1  RKCLIKYSQ-A-N-ESSKTCPSGQLLCLKKWEIG---NP-SGKEVKRGCVATCPKPWKNE   53
usage_00029.pdb         1  --LTCLNCPEM-FCGKFQICRNGEKICFKKLHQ-RRALS-W--RYIRGCADTCPVGKPYE   53
usage_00034.pdb         1  --LKCYSS----R-TETMTCPEGEDKCEKYAVGL---MH-GSFFFIYTCTSKCHEG---A   46
                                              Cp G   C K                 rgC  tCp      

usage_00005.pdb        54  VINCCG   59
usage_00016.pdb        53  VINCCG   58
usage_00017.pdb        53  VINCCG   58
usage_00018.pdb        54  YVDCCA   59
usage_00019.pdb        54  YVDCCA   59
usage_00025.pdb        54  IIQCCA   59
usage_00029.pdb        54  MIECC-   58
usage_00034.pdb        47  YNVCCS   52
                              CC 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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