################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:24 2021 # Report_file: c_1124_33.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00030.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00083.pdb # 5: usage_00227.pdb # 6: usage_00289.pdb # 7: usage_00290.pdb # 8: usage_00291.pdb # 9: usage_00292.pdb # 10: usage_00404.pdb # 11: usage_00405.pdb # # Length: 71 # Identity: 3/ 71 ( 4.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 71 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 71 ( 40.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00030.pdb 1 --SQEII-LNAEKIIYEKG-EKTTLYDIASNLNVTHAALYKHYRNKEDLFQKLALRWLEE 56 usage_00066.pdb 1 SNAKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDY 60 usage_00067.pdb 1 -NAKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDY 59 usage_00083.pdb 1 --AEQRLKRAALELYSEHGYDNVTVTDIAERAGLTRRSYFRYFPDKREVLFGGS---E-- 53 usage_00227.pdb 1 -----TLLSVAVQVFIERGYDGTS-EHLSKAAGISKSSIYHHVTGKEELLRRA------- 47 usage_00289.pdb 1 ---KDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNY 57 usage_00290.pdb 1 --MKDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNY 58 usage_00291.pdb 1 ---KDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNY 57 usage_00292.pdb 1 --MKDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNY 58 usage_00404.pdb 1 --IRDTIIERAAA-FARQGYSETSIGDIARACECSKSRLYHYFDSKEAVLRDLTTHVDSL 57 usage_00405.pdb 1 --STDTVLDIALSLFSELGFSDAKLEAIAKKSG-SKR-IHYHFGDKRGLYICCLEEAVRR 56 A e G i K usage_00030.pdb 57 TSREIFA---- 63 usage_00066.pdb 61 L---------- 61 usage_00067.pdb 60 L---------- 60 usage_00083.pdb ----------- usage_00227.pdb ----------- usage_00289.pdb 58 FIDF------- 61 usage_00290.pdb 59 FIDF-LL---- 64 usage_00291.pdb 58 FIDF-LLR--- 64 usage_00292.pdb 59 FIDF-LLR--- 65 usage_00404.pdb 58 LERC-RQVLYG 67 usage_00405.pdb 57 LR--------- 58 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################