################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:40 2021 # Report_file: c_0493_17.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00049.pdb # 2: usage_00064.pdb # 3: usage_00086.pdb # 4: usage_00107.pdb # 5: usage_00110.pdb # 6: usage_00168.pdb # 7: usage_00169.pdb # 8: usage_00171.pdb # 9: usage_00172.pdb # 10: usage_00175.pdb # # Length: 87 # Identity: 6/ 87 ( 6.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 87 ( 40.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 87 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 TLMGEILNYYAHWSGSIKLTFTFCGSAMAT-GKLLLAYSPPGADV----------PATRK 49 usage_00064.pdb 1 TLMGEILNYYAHWSGSIKLTFTFCGSAMAT-GKLLLAYSPPGADV----------PATRK 49 usage_00086.pdb 1 TLLGEILNYYAHWSGSIKLTFMFCGSAMAT-GKFLLAYSPPGAGA----------PTTRK 49 usage_00107.pdb 1 TMLGEILNYYTHWTGSIRFTFLFCGSMMAT-GKLLLSYSPPGAKP----------PTNRK 49 usage_00110.pdb 1 -TLRWFFNLFQLYRGPLDLTIIITG---ATDVDGMAWFTPVGLAVDTPWVEKESA-LQID 55 usage_00168.pdb 1 TLLGEVLNYYANWSGSITITFMCVCDAFST-GKFLVAYTPPGGKL----------PEDRK 49 usage_00169.pdb 1 TLLGEVLNYYANWSGSITITFMCVCDAFST-GKFLVAYTPPGGKL----------PEDRK 49 usage_00171.pdb 1 TMLGEILNYYTHWAGSLKFTFLFCGSMMAT-GKLLVSYAPPGADP----------PKKRK 49 usage_00172.pdb 1 TMLGEILNYYTHWAGSLKFTFLFCGSMMAT-GKLLVSYAPPGADP----------PKKRK 49 usage_00175.pdb 1 TMLGEILNYYTHWAGSLKFTFLFCGSMMAT-GKLLVSYAPPGADP----------PKKRK 49 ge lNyy w Gs Tf T gk l y PpG rk usage_00049.pdb 50 QAMLGTHMIWDIGLQSSCVLCIPWIS- 75 usage_00064.pdb 50 QAMLGTHMIWDIGLQSSCVLCIPWIS- 75 usage_00086.pdb 50 EAMLGTHVIWDVGLQSSCVLCIPWIS- 75 usage_00107.pdb 50 DAMLGTHIIWDLGLQSSCSMV------ 70 usage_00110.pdb 56 YKTALGAVRFNTRRTGNIQIRLPWYS- 81 usage_00168.pdb 50 QAMLGVHIIWDLGLQSSCTIVVPWISS 76 usage_00169.pdb 50 QAMLGVHIIWDLGLQSSCTIVVPWIS- 75 usage_00171.pdb 50 EAMLGTHVIWDIGLQSSCTMVVPWIS- 75 usage_00172.pdb 50 EAMLGTHVIWDIGLQSSCTMVVPWIS- 75 usage_00175.pdb 50 EAMLGTHVIWDIGLQSSCTMV------ 70 amlg h iwd glqssc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################