################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:47 2021 # Report_file: c_0110_15.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00053.pdb # 2: usage_00056.pdb # 3: usage_00065.pdb # 4: usage_00181.pdb # # Length: 231 # Identity: 69/231 ( 29.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 165/231 ( 71.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 66/231 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 ELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAE 57 usage_00056.pdb 1 -------------PKADHQRIFHWTNVILGFGDPDLA-TDFDEFMQVSADIGAYATALAE 46 usage_00065.pdb 1 ELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAE 57 usage_00181.pdb 1 -------------PQEDRGKLFHWSNEMTGNEDPEYAHI---DPKASSAELIGYAMKMAE 44 PqeDrgklFHWsNemtGneDPeyA i dpkasSAeligYAmkmAE usage_00053.pdb 58 EKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 117 usage_00056.pdb 47 DRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPE 106 usage_00065.pdb 58 EKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 117 usage_00181.pdb 45 EKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD 104 ekakNpaDDivtqLiqAdiDGEkLSddEfgfFvvmLaVAGNETTRNsITqGmmAfaehPd usage_00053.pdb 118 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 174 usage_00056.pdb 107 QRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANR 166 usage_00065.pdb 118 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 174 usage_00181.pdb 105 QWELYKKVR--P-ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANF 161 Qwelykkvr p eTAadEIVRWAtPVtafqRTalrDyELsGvqikkGqrVvmfYrSANf usage_00053.pdb 175 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 225 usage_00056.pdb 167 DESKF---------------------------------------------- 171 usage_00065.pdb 175 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 225 usage_00181.pdb 162 DEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 212 DEevF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################