################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:43 2021 # Report_file: c_1481_110.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00013.pdb # 2: usage_00014.pdb # 3: usage_01017.pdb # 4: usage_01056.pdb # 5: usage_01057.pdb # 6: usage_01773.pdb # 7: usage_02139.pdb # 8: usage_02140.pdb # 9: usage_02141.pdb # 10: usage_02142.pdb # 11: usage_02510.pdb # 12: usage_03078.pdb # # Length: 31 # Identity: 1/ 31 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 31 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 31 ( 51.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_00014.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_01017.pdb 1 DKQKVVKLKQIEHTLNEKRILQA-------- 23 usage_01056.pdb 1 -KKRLKKRKGYQGAMVEKKILAK-------- 22 usage_01057.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_01773.pdb 1 --------DKKMLDFYAKQRAAIPRSESVLK 23 usage_02139.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_02140.pdb 1 -KKRLKKRKGYQGAMVEKKILAK-------- 22 usage_02141.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_02142.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 usage_02510.pdb 1 -KKRLKKRKGYQGAMVEKKILAK-------- 22 usage_03078.pdb 1 NKKRLKKRKGYQGAMVEKKILAK-------- 23 k eK ila #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################