################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:37 2021 # Report_file: c_1278_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00035.pdb # 2: usage_00105.pdb # 3: usage_00158.pdb # 4: usage_00182.pdb # 5: usage_00245.pdb # 6: usage_00260.pdb # 7: usage_00261.pdb # 8: usage_00294.pdb # # Length: 64 # Identity: 13/ 64 ( 20.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 64 ( 29.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 64 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALD-STNVEAAFQTILTEIY-- 56 usage_00105.pdb 1 QVILVGNKCDLEDERVVPAEDGRRLADDLGF-EFFEASAKE-NINVKQVFERLVDVICEK 58 usage_00158.pdb 1 VQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKD-SSNVEEAFLRVATELIMR 59 usage_00182.pdb 1 PMVLVGNKCDL-AARTVESRQAQDLARSYGI-PYIETSAKT-RQGVEDAFYTLVREIRQH 57 usage_00245.pdb 1 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALD-STNVEAAFQTILTEIYRI 58 usage_00260.pdb 1 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALD-STNVEAAFQTILTEIYRI 58 usage_00261.pdb 1 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALD-STNVEAAFQTILTEIYR- 57 usage_00294.pdb 1 PMILVANKVDLMHLRKVTRDQGKEMATKYNI-PYIETSAKDPPLNVDKTFHDLVRVIRQ- 58 LvgNK DL R V A iEtSA nV F i usage_00035.pdb ---- usage_00105.pdb 59 MNE- 61 usage_00158.pdb 60 H--- 60 usage_00182.pdb ---- usage_00245.pdb 59 VSQK 62 usage_00260.pdb 59 VS-- 60 usage_00261.pdb ---- usage_00294.pdb ---- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################