################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:04 2021 # Report_file: c_0620_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00018.pdb # 2: usage_00060.pdb # 3: usage_00081.pdb # 4: usage_00124.pdb # 5: usage_00125.pdb # 6: usage_00126.pdb # 7: usage_00127.pdb # 8: usage_00129.pdb # 9: usage_00131.pdb # 10: usage_00132.pdb # 11: usage_00133.pdb # 12: usage_00142.pdb # # Length: 95 # Identity: 9/ 95 ( 9.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 95 ( 18.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 95 ( 32.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYD-MMG-----RHT-----YPILR-ED 47 usage_00060.pdb 1 -VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES--ELV--L----S-------ED- 43 usage_00081.pdb 1 TPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG------------EG---EDTRL-SA 44 usage_00124.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--GAYTY------PVL----AED 48 usage_00125.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--GAYTY------PVL----AED 48 usage_00126.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--G-----------AL----AED 43 usage_00127.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--GAY--T----YPVL----AED 48 usage_00129.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDM----------------------ED 38 usage_00131.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDM-----------------------D 37 usage_00132.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--G-------------------D 39 usage_00133.pdb 1 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM--G-----------------AED 41 usage_00142.pdb 1 --QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMM--G-------------------- 36 eK F lyD dG i Ee usage_00018.pdb 48 -APAEHVERFFEKMDRNQDGVVTIEEFLEACQK-- 79 usage_00060.pdb 44 -MIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN- 76 usage_00081.pdb 45 SEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 79 usage_00124.pdb 49 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 81 usage_00125.pdb 49 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 81 usage_00126.pdb 44 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 76 usage_00127.pdb 49 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 81 usage_00129.pdb 39 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 71 usage_00131.pdb 38 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 70 usage_00132.pdb 40 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 72 usage_00133.pdb 42 -TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 74 usage_00142.pdb 37 --PRQHVETFFQKMDKNKDGVVTIDEFIESCQKD- 68 v f D DG Ef #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################