################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:49 2021 # Report_file: c_0969_13.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00029.pdb # 2: usage_00081.pdb # 3: usage_00082.pdb # 4: usage_00092.pdb # 5: usage_00154.pdb # 6: usage_00155.pdb # 7: usage_00156.pdb # 8: usage_00200.pdb # 9: usage_00222.pdb # 10: usage_00223.pdb # 11: usage_00225.pdb # # Length: 69 # Identity: 9/ 69 ( 13.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 69 ( 30.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 69 ( 40.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 -IYLTTVGG-------------NAALGNEGYDLITT-----SNQVTLTANKPEGVFRGNQ 41 usage_00081.pdb 1 GIRLRL--A-------------GGPYGDEGYRLDSG-----PAGVTITARKAAGLFHGVQ 40 usage_00082.pdb 1 GIRLRL--A-------------GGPYGDEGYRLDSG-----PAGVTITARKAAGLFHGVQ 40 usage_00092.pdb 1 GIRLRL--A-------------GGPYGDEGYRLDSG-----PAGVTITARKAAGLFHGVQ 40 usage_00154.pdb 1 GIRLRL--A-------------EGPYGDEGYRLDSG-----REGVTITARKAAGLFHGVQ 40 usage_00155.pdb 1 GIRLRL--A-------------EGPYGDEGYRLDSG-----REGVTITARKAAGLFHGVQ 40 usage_00156.pdb 1 GIRLRL--A-------------EGPYGDEGYRLDSG-----REGVTITARKAAGLFHGVQ 40 usage_00200.pdb 1 -IYLTTVGG-------------NAALGNEGYDLITT-----SNQVTLTANKPEGVFRGNQ 41 usage_00222.pdb 1 GIRLRL--A-------------GGPYGDEGYRLDSG-----PAGVTITARKAAGLFHGVQ 40 usage_00223.pdb 1 GIRLRL--A-------------GGPYGDEGYRLDSG-----PAGVTITARKAAGLFHGVQ 40 usage_00225.pdb 1 SIWLGT--LEDEEFERPLEGTL---VHPEGYVIRSDVDDGP-FRIYIIGKTDAGVLYGVF 54 I L g EGY l vt ta k G f G q usage_00029.pdb 42 TLLQLL--- 47 usage_00081.pdb 41 TLRQLL--- 46 usage_00082.pdb 41 TLRQLL--- 46 usage_00092.pdb 41 TLRQLL--- 46 usage_00154.pdb 41 TLRQLL--- 46 usage_00155.pdb 41 TLRQLL--- 46 usage_00156.pdb 41 TLRQLL--- 46 usage_00200.pdb 42 TLLQLL--- 47 usage_00222.pdb 41 TLRQLL--- 46 usage_00223.pdb 41 TLRQLL--- 46 usage_00225.pdb 55 HFLRLLQMG 63 tl qLL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################