################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:03 2021 # Report_file: c_1396_103.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00114.pdb # 2: usage_00134.pdb # 3: usage_00136.pdb # 4: usage_00137.pdb # 5: usage_00382.pdb # 6: usage_00383.pdb # 7: usage_00387.pdb # 8: usage_00388.pdb # 9: usage_01029.pdb # # Length: 92 # Identity: 0/ 92 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 92 ( 4.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/ 92 ( 66.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00114.pdb 1 YRHQPGTAINHF---YEKLFKLAALN-------TDTAK------------ALAAHRTAV- 37 usage_00134.pdb 1 ------------APECTDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 40 usage_00136.pdb 1 ----------------TDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 36 usage_00137.pdb 1 ----------------TDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 36 usage_00382.pdb 1 ----------------TDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 36 usage_00383.pdb 1 ----------------TDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 36 usage_00387.pdb 1 ----------------TDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 36 usage_00388.pdb 1 ---------------CTDLKTKYDS-CFNEWYSEKF--LKG-----KSVENECSKQWYAY 37 usage_01029.pdb 1 ---------------YKNSIANLTK-AFSCFEYLSE--NFLNSPSVDLQ---SENTRFLA 39 l usage_00114.pdb 38 HEFVDQFKAEW-------TA----D------- 51 usage_00134.pdb 41 TTCVNAALVKQ-------G-IKPALDE-AR-- 61 usage_00136.pdb 37 TTCVNAALVKQ-------G-IKPALDE-AR-- 57 usage_00137.pdb 37 TTCVNAALVKQ-------G-IKPALDE-AR-- 57 usage_00382.pdb 37 TTCVNAALVKQ-------G-IKPALDE-AR-- 57 usage_00383.pdb 37 TTCVNAALVKQ-------G-IKPALDE-AREE 59 usage_00387.pdb 37 TTCVNAALVKQ-------G-IKPALDE-AR-- 57 usage_00388.pdb 38 TTCVNAALVKQ-------G-IKPALDE-AR-- 58 usage_01029.pdb 40 NICHAEAQELFVLKLLNDQ-ISS----KQ--- 63 cv a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################