################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:08 2021 # Report_file: c_0594_4.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00023.pdb # 2: usage_00034.pdb # 3: usage_00065.pdb # 4: usage_00066.pdb # 5: usage_00067.pdb # 6: usage_00068.pdb # 7: usage_00071.pdb # 8: usage_00078.pdb # 9: usage_00086.pdb # 10: usage_00087.pdb # 11: usage_00123.pdb # 12: usage_00148.pdb # 13: usage_00151.pdb # 14: usage_00152.pdb # 15: usage_00158.pdb # # Length: 114 # Identity: 27/114 ( 23.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/114 ( 41.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/114 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 DLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILEN 60 usage_00034.pdb 1 DYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00065.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGT-VNVGCVPKKVMWNTAVHSEFMHD 59 usage_00066.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00067.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00068.pdb 1 DYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00071.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00078.pdb 1 DYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00086.pdb 1 DYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSH 60 usage_00087.pdb 1 DYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSH 60 usage_00123.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00148.pdb 1 DYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00151.pdb 1 DLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFED 60 usage_00152.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 60 usage_00158.pdb 1 DYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVG-VPKKVMWNTAVHSEFMHD 59 D VIGGGSGG sa rAA ga vE lGGT VnvG VPKK m usage_00023.pdb 61 SRHYGFD--------TKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEG 106 usage_00034.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEII-- 105 usage_00065.pdb 60 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 106 usage_00066.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00067.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00068.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEII-- 105 usage_00071.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00078.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIR- 106 usage_00086.pdb 61 ANEYGLYQNLPLDK-EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVF- 112 usage_00087.pdb 61 ANEYGLYQNLPLDK-EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVF- 112 usage_00123.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00148.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00151.pdb 61 AAGFGWT-------VGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILD- 106 usage_00152.pdb 61 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 107 usage_00158.pdb 60 HADYGFP-------SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG 106 yG Fnw rd y RLn iY nL k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################