################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:20:58 2021 # Report_file: c_0244_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00055.pdb # 8: usage_00056.pdb # 9: usage_00057.pdb # 10: usage_00058.pdb # 11: usage_00059.pdb # 12: usage_00060.pdb # 13: usage_00066.pdb # 14: usage_00067.pdb # 15: usage_00073.pdb # # Length: 125 # Identity: 62/125 ( 49.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/125 ( 68.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/125 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 60 usage_00002.pdb 1 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 60 usage_00003.pdb 1 -PVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 59 usage_00004.pdb 1 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 60 usage_00005.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00006.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00055.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00056.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00057.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00058.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00059.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00060.pdb 1 --VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 58 usage_00066.pdb 1 RTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVI 60 usage_00067.pdb 1 RTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVI 60 usage_00073.pdb 1 --VGVLANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVV 58 VG vANqP aGCLdi s KAARFVR CD F IP l DVPGfLPGt QEy G i usage_00001.pdb 61 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 120 usage_00002.pdb 61 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 120 usage_00003.pdb 60 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 119 usage_00004.pdb 61 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 120 usage_00005.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00006.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00055.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00056.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00057.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00058.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00059.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00060.pdb 59 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 118 usage_00066.pdb 61 KHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGAT 120 usage_00067.pdb 61 KHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGAT 120 usage_00073.pdb 59 RRGAKLLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAV 118 GAKLLyAyGEaTVP TviTRKaYGGAY vM Sk d n AWPtA AVMGA gA usage_00001.pdb 121 GFVYR 125 usage_00002.pdb 121 GFVY- 124 usage_00003.pdb 120 GFVYR 124 usage_00004.pdb 121 GFVYR 125 usage_00005.pdb 119 GFVYR 123 usage_00006.pdb 119 GF--- 120 usage_00055.pdb 119 GFVY- 122 usage_00056.pdb 119 GFVY- 122 usage_00057.pdb 119 GFVY- 122 usage_00058.pdb 119 GFVY- 122 usage_00059.pdb 119 GFVYR 123 usage_00060.pdb 119 GFVY- 122 usage_00066.pdb 121 EIIHR 125 usage_00067.pdb 121 EIIHR 125 usage_00073.pdb 119 GI--- 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################