################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:46 2021 # Report_file: c_0547_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00089.pdb # 2: usage_00091.pdb # 3: usage_00093.pdb # 4: usage_00164.pdb # 5: usage_00166.pdb # 6: usage_00167.pdb # 7: usage_00169.pdb # 8: usage_00171.pdb # 9: usage_00173.pdb # 10: usage_00232.pdb # 11: usage_00233.pdb # # Length: 140 # Identity: 43/140 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/140 ( 39.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/140 ( 2.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 -ILQRLKVKMQWAKAYGFGTERAKFGNSLWTSIFNYAPDARDLFKSVKSEDMRSPQFKAH 59 usage_00091.pdb 1 -PLQRLKVKRQWAEAYGSGNGREEFGHFIWANVFKVAPSARDMFKRVRGDNIYTPAFRAH 59 usage_00093.pdb 1 GPLQRLKVKRQWAEAYGSGNGREEFGHFIWANVFKVAPSARDMFKRVRGDNIYTPAFRAH 60 usage_00164.pdb 1 GPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAH 60 usage_00166.pdb 1 AMLERAKVKDEWAKAYGIGAARSKFGDALWRNVFNYAPNARDIFESVNSKDMASPEFKAH 60 usage_00167.pdb 1 GPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAH 60 usage_00169.pdb 1 GPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAH 60 usage_00171.pdb 1 GPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAH 60 usage_00173.pdb 1 GPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAH 60 usage_00232.pdb 1 GPLQRLKVKRQWAEAYGSGNGREEFGHFIWANVFKVAPSARDMFKRVRGDNIYTPAFRAH 60 usage_00233.pdb 1 GPLQRLKVKRQWAEAYGSGNGREEFGHFIWANVFKVAPSARDMFKRVRGDNIYTPAFRAH 60 LqRlKVK qWA AYG G R FG W vF P ARD Fk V P F AH usage_00089.pdb 60 IARVIGGLDRVISMFDNEDALNADLEHLKSQHDPRGLDALNFVVFGKALFATVGGQFGVC 119 usage_00091.pdb 60 ATRVLGGLDMCVALLDDESVLNTQLAHLASQHSSRGVSAEQYNVVEHAVMMGVEHEIGQN 119 usage_00093.pdb 61 ATRVLGGLDMCVALLDDESVLNTQLAHLASQHSSRGVSAEQYNVVEHAVMMGVEHEIGQN 120 usage_00164.pdb 61 ATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVIGSE 120 usage_00166.pdb 61 IARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRTIDPVNFVVFRKALIATVAGTFGVC 120 usage_00167.pdb 61 ATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVIGSE 120 usage_00169.pdb 61 ATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVIGSE 120 usage_00171.pdb 61 ATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVIGSE 120 usage_00173.pdb 61 ATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVIGSE 120 usage_00232.pdb 61 ATRVLGGLDMCVALLDDESVLNTQLAHLASQHSSRGVSAEQYNVVEHAVMMGVEHEIGQN 120 usage_00233.pdb 61 ATRVLGGLDMCVALLDDESVLNTQLAHLASQHSSRGVSAEQYNVVEHAVMMGVEHEIGQN 120 RVlGGLD lD e Ln LaHL QH Rg a A V G usage_00089.pdb 120 FDLPAWESCYKVIAMGI--- 136 usage_00091.pdb 120 VFDKDAWQACLDVITSGIQG 139 usage_00093.pdb 121 VFDKDAWQACLDVITSGIQG 140 usage_00164.pdb 121 VFDQDAWKPCLNVITNGIQ- 139 usage_00166.pdb 121 FDVPAWQGCYNIIAKGI--- 137 usage_00167.pdb 121 VFDQDAWKPCLNVITNGIQ- 139 usage_00169.pdb 121 VFDQDAWKPCLNVITNGIQ- 139 usage_00171.pdb 121 VFDQDAWKPCLNVITNGIQ- 139 usage_00173.pdb 121 VFDQDAWKPCLNVITNGIQ- 139 usage_00232.pdb 121 VFDKDAWQACLDVITSGIQG 140 usage_00233.pdb 121 VFDKDAWQACLDVITSGIQG 140 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################