################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:23 2021 # Report_file: c_0382_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00317.pdb # 2: usage_00318.pdb # 3: usage_00446.pdb # 4: usage_00510.pdb # 5: usage_00511.pdb # 6: usage_00512.pdb # 7: usage_00826.pdb # 8: usage_00827.pdb # # Length: 111 # Identity: 18/111 ( 16.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/111 ( 36.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/111 ( 32.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00317.pdb 1 DPGVFVDDDGQAYMYFGGN--------------GQNNIRVIKLGNDMIST-VGSAMTMSA 45 usage_00318.pdb 1 DPGVFVDDDGQAYMYFGGN--------------GQNNIRVIKLGNDMIST-VGSAMTMSA 45 usage_00446.pdb 1 DTSLFIDDDGTPYLYFV-RFT-D---------GN--VIWVAQ-TDDLSIKT-ETLNQCIK 45 usage_00510.pdb 1 DPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANP-KTARVIKLGPDMTSV-VGSASTIDA 58 usage_00511.pdb 1 DPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANP-KTARVIKLGPDMTSV-VGSASTIDA 58 usage_00512.pdb 1 DPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANP-KTARVIKLGPDMTSV-VGSASTIDA 58 usage_00826.pdb 1 DPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANP-KTARVIKLGPDMTSV-VGSASTIDA 58 usage_00827.pdb 1 DPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANP-KTARVIKLGPDMTSV-VGSASTIDA 58 Dp vFvDDDG Y Y g rVik g Dm s gsa t a usage_00317.pdb 46 PR---------FFEAAYMHKYNGKYYFSYASDF-SQG------ASKIEYMM 80 usage_00318.pdb 46 PR---------FFEAAYMHKYNGKYYFSYASDF-SQG------ASKIEYMM 80 usage_00446.pdb 46 AEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENK------GYGVGYAT 90 usage_00510.pdb 59 PF---------MFEDSGLHKYNGTYYYSYCINF-GGTHPADKPPGEIGYMT 99 usage_00511.pdb 59 PF---------MFEDSGLHKYNGTYYYSYCINF-GGTHPADKPPGEIGYMT 99 usage_00512.pdb 59 PF---------MFEDSGLHKYNGTYYYSYCINF-GGTHPADKPPGEIGYMT 99 usage_00826.pdb 59 PF---------MFEDSGLHKYNGTYYYSYCINF-GGTHPADKPPGEIGYMT 99 usage_00827.pdb 59 PF---------MFEDSGLHKYNGTYYYSYCINF-GGTHPADKPPGEIGYMT 99 p fE hKyNG YY sY f i Ym #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################