################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:48 2021 # Report_file: c_0398_34.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00099.pdb # 2: usage_00617.pdb # 3: usage_00619.pdb # 4: usage_00700.pdb # 5: usage_00701.pdb # # Length: 147 # Identity: 80/147 ( 54.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/147 ( 54.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/147 ( 40.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00099.pdb 1 ------------------------------RGKLQLTVTQQLGRTSTLYLSGSHQTYWGT 30 usage_00617.pdb 1 ------------------------------RGKLQLTVTQQLGRTSTLYLSGSHQTYWGT 30 usage_00619.pdb 1 --------------------------AYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGT 34 usage_00700.pdb 1 -------------------------------GKLQLTVTQQLGRTSTLYLSGSHQTYWGT 29 usage_00701.pdb 1 VGYRYSTSGYFNFADTTYSRMNYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGT 60 GKLQLTVTQQLGRTSTLYLSGSHQTYWGT usage_00099.pdb 31 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR 90 usage_00617.pdb 31 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF------------- 77 usage_00619.pdb 35 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF------------- 81 usage_00700.pdb 30 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR 89 usage_00701.pdb 61 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWR 120 SNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF usage_00099.pdb 91 -HASASYSMSHDLNGRMTNLAGVYGT- 115 usage_00617.pdb 78 ASASYSMSHDLNGRMTNLAG------V 98 usage_00619.pdb 82 ASASYSMSHDLNGRMTNLA-------- 100 usage_00700.pdb 90 -HASASYSMSHDLNGRMTNLAGVYGT- 114 usage_00701.pdb 121 -HASASYSMSHD--------------- 131 AS S S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################