################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:33 2021 # Report_file: c_1387_170.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00468.pdb # 2: usage_01399.pdb # 3: usage_02446.pdb # 4: usage_02452.pdb # 5: usage_02522.pdb # # Length: 84 # Identity: 60/ 84 ( 71.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/ 84 ( 76.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 84 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00468.pdb 1 SPEQLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELS 60 usage_01399.pdb 1 SPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELS 60 usage_02446.pdb 1 -PEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELS 59 usage_02452.pdb 1 -PEQLVLTLLEAEPPHVLI------FTEASMMMSLTKLADKELVHMISWAKKIPGFVELS 53 usage_02522.pdb 1 -PEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELS 59 PEQLVLTLLEAEPPhVLi FTEASMMMSLTKLADKELVHMIsWAKKIPGFVELS usage_00468.pdb 61 LLDQVRLLESCWMEVLMVGLMWRS 84 usage_01399.pdb 61 LFDQVRLLESCW------------ 72 usage_02446.pdb 60 LFDQVRLLESCW------------ 71 usage_02452.pdb 54 LFDQVRLLESC------------- 64 usage_02522.pdb 60 LFDQVRLLESCW------------ 71 LfDQVRLLESC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################