################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:32 2021 # Report_file: c_0004_37.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00098.pdb # 2: usage_00099.pdb # 3: usage_00100.pdb # # Length: 238 # Identity: 229/238 ( 96.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 229/238 ( 96.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/238 ( 3.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 -DKVYAINPDGTEKWRFSDFTIFEDILYVTSDGHLYAINTDGTEKWRFKTKKAIYATPIV 59 usage_00099.pdb 1 -DKVYAINP--------SDFTIFEDILYVTSDGHLYAINTDGTEKWRFKTKKAIYATPIV 51 usage_00100.pdb 1 SDKVYAINPDGTEKWRFSDFTIFEDILYVTSDGHLYAINTDGTEKWRFKTKKAIYATPIV 60 DKVYAINP SDFTIFEDILYVTSDGHLYAINTDGTEKWRFKTKKAIYATPIV usage_00098.pdb 60 SEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDG 119 usage_00099.pdb 52 SEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDG 111 usage_00100.pdb 61 SEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDG 120 SEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDG usage_00098.pdb 120 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGN 179 usage_00099.pdb 112 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGN 171 usage_00100.pdb 121 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGN 180 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGN usage_00098.pdb 180 TDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFN 237 usage_00099.pdb 172 TDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFN 229 usage_00100.pdb 181 TDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFN 238 TDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################