################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:21 2021 # Report_file: c_1226_43.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00097.pdb # 2: usage_00364.pdb # 3: usage_00521.pdb # 4: usage_00608.pdb # 5: usage_00814.pdb # 6: usage_00969.pdb # 7: usage_01337.pdb # # Length: 41 # Identity: 0/ 41 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 41 ( 19.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 41 ( 46.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 IPLVFELDENLKPSKPSYYL------DPEAAAA-------- 27 usage_00364.pdb 1 VPILLELDENLRAVGPHQFL-G----DQEAIQAAIKKVEDQ 36 usage_00521.pdb 1 VPILLELDENLRAVGPHQFL-G----DQEAIQAAIKKVEDQ 36 usage_00608.pdb 1 ---PSKRTPDGEFRDIAHPINSDRQ-EIQDAVK-VYDET-- 34 usage_00814.pdb 1 VPLVYELDENLKPIKH--YY-L---LDSEELKKKM------ 29 usage_00969.pdb 1 VPILLELDENLRAVGPHQFL-G----DQEAIQAAIKKVEDQ 36 usage_01337.pdb 1 VPILLELDENLRAVGPHQFL-G----DQEAIQAAIKKVED- 35 eldenl d e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################