################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:00:23 2021 # Report_file: c_0328_74.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00402.pdb # 2: usage_00403.pdb # 3: usage_00405.pdb # 4: usage_00407.pdb # 5: usage_00435.pdb # # Length: 151 # Identity: 140/151 ( 92.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 144/151 ( 95.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/151 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00402.pdb 1 ---LCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKD 57 usage_00403.pdb 1 -WVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKD 59 usage_00405.pdb 1 -WVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKD 59 usage_00407.pdb 1 ---LCQIGRAYFELSEY-QAERIFSEVRRIENYRVEG-EIYSTTLWHLQKDVALSVLSKD 55 usage_00435.pdb 1 GWVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKD 60 LCQIGRAYFELSEY QAERIFSEVRRIENYRVEG EIYSTTLWHLQKDVALSVLSKD usage_00402.pdb 58 LTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD 117 usage_00403.pdb 60 LTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD 119 usage_00405.pdb 60 LTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD 119 usage_00407.pdb 56 LTD-DKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD 114 usage_00435.pdb 61 LTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD 120 LTD DKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELD usage_00402.pdb 118 KALACFRNAIRVNPRHYNAWYGLGMIYYKQE 148 usage_00403.pdb 120 KALACFRNAIRVNPRHYNAWYGLGMIYYKQE 150 usage_00405.pdb 120 KALACFRNAIRVNPRHYNAWYGLGMIYYKQE 150 usage_00407.pdb 115 KALACFRNAIRVNPRHYNAWYGLGIYYKQ-E 144 usage_00435.pdb 121 KALACFRNAIRVNPRHYNAWYGLGMIYYKQE 151 KALACFRNAIRVNPRHYNAWYGLGmiYyk E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################