################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:04 2021 # Report_file: c_0175_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00168.pdb # 4: usage_00566.pdb # # Length: 155 # Identity: 42/155 ( 27.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 138/155 ( 89.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/155 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG-AEVVQGDQ-DD 57 usage_00002.pdb 1 -KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG-AEVVQGDQ-DD 57 usage_00168.pdb 1 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG-AEVVQGDQ-DD 58 usage_00566.pdb 1 -KTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 58 KlvvVfggTGaQggSvaRtlledG fkVRvvtrnprkkaAkELrlqg aevvQGdq dd usage_00001.pdb 58 QVIMELALNGAYATFIVTNAWESCSQE-QEVKQGKLLADLARRLG-LHYVVYSGLENIKK 115 usage_00002.pdb 58 QVIMELALNGAYATFIVTNAWESCSQE-QEVKQGKLLADLARRLG-LHYVVYSGLENIKK 115 usage_00168.pdb 59 QVIMELALNGAYATFIVTNYWESCSQE-QEVKQGKLLADLARRLG-LHYVVYSGLENIKK 116 usage_00566.pdb 59 VPLMDTLFEGAHLAFINTTSQA-----GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL 113 qviMelalnGAyatFIvTn we qEvkqGKlLADlArRlG lhyvvYSglenikk usage_00001.pdb 116 LTAGR-LAAAHFDGKGEVEEYFRDIGVPMTSVRLP 149 usage_00002.pdb 116 LTAGR-LAAAHFDGKGEVEEYFRDIGVPMTSVRLP 149 usage_00168.pdb 117 LTAGR-LAAAHFDGKGEVEEYFRDIGVPMTSVRLP 150 usage_00566.pdb 114 YG--PWPAVPMWAPKFTVENYVRQLGLPSTFVY-- 144 lt r lAaahfdgKgeVEeYfRdiGvPmTsVr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################