################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:38 2021 # Report_file: c_0385_27.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00275.pdb # 2: usage_00276.pdb # 3: usage_00277.pdb # 4: usage_00397.pdb # 5: usage_00398.pdb # 6: usage_00403.pdb # 7: usage_00528.pdb # 8: usage_00553.pdb # 9: usage_00554.pdb # 10: usage_00555.pdb # 11: usage_00556.pdb # 12: usage_00575.pdb # # Length: 74 # Identity: 39/ 74 ( 52.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 74 ( 59.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 74 ( 13.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00275.pdb 1 --SQLSVAPGETARISCGGRSLGSRAVQWYQQKPGQAPVLVIYNNQDRPSGIPERFSGSP 58 usage_00276.pdb 1 --RPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTP 58 usage_00277.pdb 1 --RPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTP 58 usage_00397.pdb 1 APTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSP 60 usage_00398.pdb 1 -PTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSP 59 usage_00403.pdb 1 APTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSP 60 usage_00528.pdb 1 --RPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTP 58 usage_00553.pdb 1 --SPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTP 58 usage_00554.pdb 1 --SPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTP 58 usage_00555.pdb 1 YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTP 60 usage_00556.pdb 1 YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTP 60 usage_00575.pdb 1 ---PLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTP 57 SVA G TA I CG LGSR V WYQ PGQAP L IYNN DRPSGIP RFSG P usage_00275.pdb 59 D----TTATLTISR 68 usage_00276.pdb 59 DINFGTRATLTIS- 71 usage_00277.pdb 59 DINRA--TLTISG- 69 usage_00397.pdb 61 GSTFGTTATLTITS 74 usage_00398.pdb 60 GSTFGTTATLTIT- 72 usage_00403.pdb 61 GSTFGTTATLTIT- 73 usage_00528.pdb 59 DINFGTRATLTISG 72 usage_00553.pdb 59 DINFGTTATLTISG 72 usage_00554.pdb 59 DINFGTTATLTISG 72 usage_00555.pdb 61 DINFGTTATLTISG 74 usage_00556.pdb 61 DINFGTTATLTISG 74 usage_00575.pdb 58 DINFGTRATLTISG 71 atlti #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################