################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:02 2021 # Report_file: c_1077_19.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00082.pdb # 2: usage_00083.pdb # 3: usage_00294.pdb # 4: usage_00301.pdb # 5: usage_00302.pdb # 6: usage_00303.pdb # 7: usage_00304.pdb # 8: usage_00510.pdb # 9: usage_00511.pdb # 10: usage_00512.pdb # 11: usage_00513.pdb # # Length: 65 # Identity: 4/ 65 ( 6.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/ 65 ( 52.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 65 ( 47.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00082.pdb 1 --NNQDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 49 usage_00083.pdb 1 -----DELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 46 usage_00294.pdb 1 --------SPDDVWKLTVKNE-----EKLS-FMTQTTLSVDDTSDVIDALRKRF---PKI 43 usage_00301.pdb 1 ---NQDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 48 usage_00302.pdb 1 -----DELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 46 usage_00303.pdb 1 ----QDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 47 usage_00304.pdb 1 --NNQDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 49 usage_00510.pdb 1 KKNNQDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 51 usage_00511.pdb 1 ----QDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 47 usage_00512.pdb 1 ----QDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 47 usage_00513.pdb 1 --NNQDELKKLAATEAA----KSITTEITLGVGT-----GSTVGFLIEELVNYRDKIKTV 49 kklaateaa Eitl vgT gstvgflIeeLvnyr ktv usage_00082.pdb 50 ---VS 51 usage_00083.pdb 47 ---VS 48 usage_00294.pdb 44 VGP-- 46 usage_00301.pdb 49 ---VS 50 usage_00302.pdb 47 ---VS 48 usage_00303.pdb 48 ---VS 49 usage_00304.pdb 50 ---VS 51 usage_00510.pdb 52 ---VS 53 usage_00511.pdb 48 ---VS 49 usage_00512.pdb 48 ---VS 49 usage_00513.pdb 50 ---VS 51 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################