################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:34 2021 # Report_file: c_0700_51.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00484.pdb # 2: usage_00485.pdb # 3: usage_00605.pdb # 4: usage_00805.pdb # 5: usage_00806.pdb # # Length: 61 # Identity: 39/ 61 ( 63.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/ 61 ( 63.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 61 ( 36.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00484.pdb 1 YPVFVGHKH-------RLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWK 53 usage_00485.pdb 1 YPVFVG----------RLDIQMIMIMNRTLYVAARDHIYTVDID-----EIYCSK----- 40 usage_00605.pdb 1 YPVFVGHK-PGRTQRHRLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSK----- 54 usage_00805.pdb 1 YPVFVGHK-PGRTQRHRLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSK----- 54 usage_00806.pdb 1 YPVFVGHK-PG-----RLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCS------ 48 YPVFVG RLDIQMIMIMNRTLYVAARDHIYTVDID EIYCS usage_00484.pdb 54 S 54 usage_00485.pdb - usage_00605.pdb - usage_00805.pdb - usage_00806.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################