################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:05 2021 # Report_file: c_0943_61.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00354.pdb # 2: usage_00355.pdb # 3: usage_00571.pdb # # Length: 76 # Identity: 2/ 76 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 76 ( 27.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 55/ 76 ( 72.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00354.pdb 1 SFYFDDQQAIKNGAGHDGFIYTGDPVTPGFTSVRQAGECVSVQLILE------------- 47 usage_00355.pdb 1 SFYFDDQQAIKNGAGHDGFIYTGDPVTPGFTSVRQAGECVSVQLILE------------- 47 usage_00571.pdb 1 ------------AFSYVG---------------------NQKFTVWSSRVHPGSVISVAP 27 gaghdG vsvqlile usage_00354.pdb 48 ------NGAVAVGDCA 57 usage_00355.pdb 48 ------NGAVAVGDCA 57 usage_00571.pdb 28 LLIALEIVTGQAG--- 40 ngavavG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################