################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:07 2021 # Report_file: c_0328_32.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00340.pdb # 2: usage_00341.pdb # 3: usage_00342.pdb # 4: usage_00347.pdb # 5: usage_00348.pdb # 6: usage_00349.pdb # 7: usage_00350.pdb # 8: usage_00351.pdb # 9: usage_00352.pdb # # Length: 154 # Identity: 140/154 ( 90.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 140/154 ( 90.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/154 ( 2.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00340.pdb 1 -IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 59 usage_00341.pdb 1 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 60 usage_00342.pdb 1 ----VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 56 usage_00347.pdb 1 -IRQVYYRDKGISHAKAGRYSEAVVMLEQVYDADAFDVEVALHLGIAYVKTGAVDRGTEL 59 usage_00348.pdb 1 -IRQVYYRDKGISHAKAGRYSEAVVMLEQVYDADAFDVEVALHLGIAYVKTGAVDRGTEL 59 usage_00349.pdb 1 -IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 59 usage_00350.pdb 1 ----VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 56 usage_00351.pdb 1 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 60 usage_00352.pdb 1 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTEL 60 VYYRDKGISHAKAGRYS AV LEQVYDADAFDV VALHLGIAYVKTGAVDRGTEL usage_00340.pdb 60 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 119 usage_00341.pdb 61 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 120 usage_00342.pdb 57 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 116 usage_00347.pdb 60 LERSIADAPDNIKVATVLGLTYVQVQKYDLAVPLLVKVAEANPVNFNVRFRLGVALDNLG 119 usage_00348.pdb 60 LERSIADAPDNIKVATVLGLTYVQVQKYDLAVPLLVKVAEANPVNFNVRFRLGVALDNLG 119 usage_00349.pdb 60 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALKNLG 119 usage_00350.pdb 57 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALKNLG 116 usage_00351.pdb 61 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALKNLG 120 usage_00352.pdb 61 LERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALKNLG 120 LERS ADAPDN KVATVLGLTYVQVQKYDLAVPLL KVAEANP NFNVRFRLGVAL NLG usage_00340.pdb 120 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 153 usage_00341.pdb 121 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 154 usage_00342.pdb 117 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 150 usage_00347.pdb 120 RFDEAIDSFKIALGLRPNEGKVHRAIAYSYEQMG 153 usage_00348.pdb 120 RFDEAIDSFKIALGLRPNEGKVHRAIAYSYEQMG 153 usage_00349.pdb 120 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 153 usage_00350.pdb 117 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 150 usage_00351.pdb 121 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 154 usage_00352.pdb 121 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 154 RFDEAIDSFKIALGLRPNEGKVHRAIA SYEQMG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################