################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:32 2021 # Report_file: c_1488_279.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00026.pdb # 2: usage_00753.pdb # 3: usage_00787.pdb # 4: usage_01107.pdb # 5: usage_01108.pdb # 6: usage_01250.pdb # 7: usage_02925.pdb # 8: usage_04131.pdb # 9: usage_06164.pdb # 10: usage_07397.pdb # 11: usage_08211.pdb # 12: usage_08212.pdb # 13: usage_08213.pdb # # Length: 16 # Identity: 0/ 16 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 16 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 16 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 RVTALVNWVQQTLA-- 14 usage_00753.pdb 1 -TPLHNLIRECILHN- 14 usage_00787.pdb 1 -VCNYVNWIQQTIAAN 15 usage_01107.pdb 1 -VTALVNWVQQTLAAN 15 usage_01108.pdb 1 -VTALVNWVQQTLAAN 15 usage_01250.pdb 1 -VTALVNWVQQTLAA- 14 usage_02925.pdb 1 --AAPVLWTQQVLTTG 14 usage_04131.pdb 1 RVTALMPWVQQILEAN 16 usage_06164.pdb 1 -VTALVNWVQQTLAAN 15 usage_07397.pdb 1 -VTALVNWVQQTLAAN 15 usage_08211.pdb 1 -VTALVNWVQQTLA-- 13 usage_08212.pdb 1 -VTALVNWVQQTLAAN 15 usage_08213.pdb 1 -VTALVNWVQQTLA-- 13 w qq l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################