################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:17 2021 # Report_file: c_1403_2.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00086.pdb # 2: usage_00087.pdb # 3: usage_00261.pdb # 4: usage_00422.pdb # 5: usage_00423.pdb # 6: usage_00472.pdb # 7: usage_00473.pdb # 8: usage_00478.pdb # 9: usage_00506.pdb # 10: usage_00507.pdb # 11: usage_00508.pdb # 12: usage_00874.pdb # 13: usage_01035.pdb # # Length: 87 # Identity: 62/ 87 ( 71.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 87 ( 71.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 87 ( 28.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 58 usage_00087.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 58 usage_00261.pdb 1 --FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 57 usage_00422.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 58 usage_00423.pdb 1 --FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 57 usage_00472.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCG------- 52 usage_00473.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 58 usage_00478.pdb 1 -GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 58 usage_00506.pdb 1 GGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 59 usage_00507.pdb 1 GGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMS--- 56 usage_00508.pdb 1 GGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG-----SLVVLAIERYVVVC-KPMSNFR 54 usage_00874.pdb 1 --FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 57 usage_01035.pdb 1 --FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFR 57 FTTTLYTSLHGYFVFGPTGCNLEGFFATLGG SLVVLAIERYVVVC usage_00086.pdb 59 FGENHAIMGVAFTWVMALACAAPPLVG 85 usage_00087.pdb 59 FGENHAIMGVAFTWVMALACAAPPLV- 84 usage_00261.pdb 58 FGENHAIMGVAFTWVMALACA------ 78 usage_00422.pdb 59 FGENHAIMGVAFTWVMALACAAPPLVG 85 usage_00423.pdb 58 FGENHAIMGVAFTWVMALACAAPPLV- 83 usage_00472.pdb 53 --ENHAIMGVAFTWVMALAC------- 70 usage_00473.pdb 59 FGENHAIMGVAFTWVMALA-------- 77 usage_00478.pdb 59 FGENHAIMGVAFTWVMALACAAPPLV- 84 usage_00506.pdb 60 FGENHAIMGVAFTWVMALAC------- 79 usage_00507.pdb 57 --ENHAIMGVAFTWVMALACA------ 75 usage_00508.pdb 55 FGENHAIMGVAFTWVMALAC------- 74 usage_00874.pdb 58 FGENHAIMGVAFTWVMALACA------ 78 usage_01035.pdb 58 FGENHAIMGVAFTWVMALACAAPPLV- 83 ENHAIMGVAFTWVMALA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################