################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:51:55 2021 # Report_file: c_0396_9.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00008.pdb # 4: usage_00015.pdb # 5: usage_00035.pdb # 6: usage_00065.pdb # 7: usage_00068.pdb # 8: usage_00088.pdb # 9: usage_00108.pdb # 10: usage_00115.pdb # 11: usage_00138.pdb # 12: usage_00167.pdb # 13: usage_00171.pdb # 14: usage_00176.pdb # 15: usage_00193.pdb # 16: usage_00195.pdb # 17: usage_00202.pdb # 18: usage_00216.pdb # 19: usage_00227.pdb # 20: usage_00244.pdb # 21: usage_00245.pdb # 22: usage_00263.pdb # 23: usage_00264.pdb # 24: usage_00265.pdb # 25: usage_00296.pdb # 26: usage_00297.pdb # 27: usage_00302.pdb # 28: usage_00307.pdb # 29: usage_00363.pdb # 30: usage_00364.pdb # 31: usage_00381.pdb # 32: usage_00382.pdb # 33: usage_00383.pdb # 34: usage_00392.pdb # 35: usage_00399.pdb # 36: usage_00408.pdb # 37: usage_00601.pdb # 38: usage_00602.pdb # 39: usage_00609.pdb # 40: usage_00623.pdb # 41: usage_00642.pdb # 42: usage_00643.pdb # # Length: 106 # Identity: 19/106 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/106 ( 40.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/106 ( 38.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -------SVYPLAPGSAAQ-TNSM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 48 usage_00005.pdb 1 --KTTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 53 usage_00008.pdb 1 ---TTAPSVYPLAPVCGDTTG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 52 usage_00015.pdb 1 SAKTTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 55 usage_00035.pdb 1 -----PPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 50 usage_00065.pdb 1 ---TTPPSVYPLAPGS------SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 47 usage_00068.pdb 1 ---TTPPSVYPLAPGCGDTTG-SS-VTLGCLVKGYFPESVTVTWNSG---SLSSSVHAFP 52 usage_00088.pdb 1 ---TTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 52 usage_00108.pdb 1 -------SVYPLAP------G-SS-VTLGCLVKGYFPESVTVTWNSG---SLSSSVHTFP 42 usage_00115.pdb 1 --KTTPPSVYPLAPGAAAATS-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 53 usage_00138.pdb 1 --KTTAPSVYPLAPVC------GS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 48 usage_00167.pdb 1 ---TTPPSVFPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 52 usage_00171.pdb 1 ---TTAPSVYPLAPVC------SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 47 usage_00176.pdb 1 -----VSSVFPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---ALSSGVHTFP 50 usage_00193.pdb 1 ---TTAPSVYPLAPVCGDTTG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 52 usage_00195.pdb 1 ---TTAPSVYPLAPVCGDTTG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 52 usage_00202.pdb 1 ---TTPPSVYPLAP--------SS-VTLGCLVKGYFPESVTVTWNS--------SVHTFP 40 usage_00216.pdb 1 ---TTAPSVYPLAPVCGDTTG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 52 usage_00227.pdb 1 -----APTLFPLVS----------CVAVGCLAQDFLPDSITFSWKY-KNNSDISSTRGFP 44 usage_00244.pdb 1 ---TTPPSVYPLAPGCGDTTG-SS-VTSGCLVKGYFPEPVTVTWNSG---SLSSSVHTFP 52 usage_00245.pdb 1 -------SVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 48 usage_00263.pdb 1 ---TTAPSVYPLAP-----TG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 47 usage_00264.pdb 1 ---TTAPSVYPLAP-----TG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 47 usage_00265.pdb 1 ---TTAPSVYPLAP-----TG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 47 usage_00296.pdb 1 ---TTPPSVYPLAPGS------SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 47 usage_00297.pdb 1 ---TTPPSVYPLAPGS------SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 47 usage_00302.pdb 1 ------PSVYPLAPGS----S--M-VTLGCLVKGYFPEPVTVVWNSG---SLSSGVHTFP 44 usage_00307.pdb 1 ---TTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 52 usage_00363.pdb 1 --KTTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 53 usage_00364.pdb 1 --KTTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 53 usage_00381.pdb 1 -------SVYPLAPGCGDTTG-SS-VTLGCLVKGYFPESVTVTWNS-------SSVHTFP 44 usage_00382.pdb 1 -------SVYPLAPGCGDTTG-SS-VTLGCLVKGYFPESVTVTWN--------SSVHTFP 43 usage_00383.pdb 1 -------SVYPLAPGCGDTTG-SS-VTLGCLVKGYFPESVTVTWNSG---SLSSSVHTFP 48 usage_00392.pdb 1 ---TTAPSVYPLAPVCGDTTG-SS-VTLGCLVKGYFPEPVTLTWNSG---SLSSGVHTFP 52 usage_00399.pdb 1 ---TTPPSVYPLAP---------M-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 44 usage_00408.pdb 1 -------SVYPLAPVCG-DTG-SS-VTLGCLVKGYFPKPVTLTWNSG---SLSSGVHTFP 47 usage_00601.pdb 1 ---TTPKLVYPLAP-----------VTLGCLVKGYFPEPVTVTWNSG----AL--VHTFP 40 usage_00602.pdb 1 ---TTAPSVYPLAP--------SM-VTLGCLVKGYFPEPVTVTWNSG---ALSSGVHTFP 45 usage_00609.pdb 1 ---TTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 52 usage_00623.pdb 1 ---TTPPSVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 52 usage_00642.pdb 1 -------SVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 48 usage_00643.pdb 1 -------SVYPLAPGSAAQTN-SM-VTLGCLVKGYFPEPVTVTWNSG---SLSSGVHTFP 48 v PLap Vt GCLvkgyfP vT Wn vh FP usage_00004.pdb 49 AVLQSDLYTLSSSVSVPT-S--TETVTCNVAHAPSSTKVDKKIVP- 90 usage_00005.pdb 54 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 98 usage_00008.pdb 53 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 97 usage_00015.pdb 56 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 100 usage_00035.pdb 51 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 95 usage_00065.pdb 48 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 92 usage_00068.pdb 53 ALLQSDLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEP- 97 usage_00088.pdb 53 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 97 usage_00108.pdb 43 ALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEP- 87 usage_00115.pdb 54 AVLQSDLYTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEP- 98 usage_00138.pdb 49 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 93 usage_00167.pdb 53 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 97 usage_00171.pdb 48 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 92 usage_00176.pdb 51 AVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVP- 95 usage_00193.pdb 53 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 97 usage_00195.pdb 53 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 97 usage_00202.pdb 41 ALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEP- 85 usage_00216.pdb 53 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 97 usage_00227.pdb 45 SVLRGGKYAATSQVLLPSKDVTDEHVVCKVQH-PN-GNKEKNVPLP 88 usage_00244.pdb 53 ALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL--- 95 usage_00245.pdb 49 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 93 usage_00263.pdb 48 AVLQSGLYTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEP- 92 usage_00264.pdb 48 AVLQSGLYTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEP- 92 usage_00265.pdb 48 AVLQSGLYTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEP- 92 usage_00296.pdb 48 AVLQSDLYTLSSSVTVPSSPWPSETVTCNVAHPASSTAVDKAIVP- 92 usage_00297.pdb 48 AVLQSDLYTLSSSVTVPSSPWPSETVTCNVAHPASSTAVDKAIVP- 92 usage_00302.pdb 45 AVLQQGLYTLSSSVTVPSSPWPSETVTCNVAHPASSTAVDKAIVP- 89 usage_00307.pdb 53 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 97 usage_00363.pdb 54 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 98 usage_00364.pdb 54 AVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP- 98 usage_00381.pdb 45 ALLQSGLYTMSSSVTVPSSTWPSETVTCSVAHPASSTTVDKKLEP- 89 usage_00382.pdb 44 ALLQSGLYTMSSSVTVPSSTWPSETVTCSVAHPASSTTVDKKLEP- 88 usage_00383.pdb 49 ALLQSGLYTMSSSVTVPSSTWPSETVTCSVAHPASSTTVDKKLEP- 93 usage_00392.pdb 53 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 97 usage_00399.pdb 45 AVLQSDLYTLSSSVTVP--------VTCNVAHPASSTKVDKKIVP- 81 usage_00408.pdb 48 AVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP- 92 usage_00601.pdb 41 AVLQSGLYTLTSSVTSST-----W-VTCNVAHPASSTKVDKKLER- 79 usage_00602.pdb 46 AVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVP- 90 usage_00609.pdb 53 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 97 usage_00623.pdb 53 AVLQSDLYTLSSSVTVPSSSRPSETVTCNVAHPASSTKVDKKIVP- 97 usage_00642.pdb 49 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 93 usage_00643.pdb 49 AVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP- 93 a Lq lYt SsV tC VaH s t vdK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################