################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:30 2021 # Report_file: c_1310_77.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00014.pdb # 2: usage_00128.pdb # 3: usage_00173.pdb # 4: usage_00174.pdb # 5: usage_00187.pdb # 6: usage_00189.pdb # 7: usage_00245.pdb # 8: usage_00253.pdb # 9: usage_00456.pdb # 10: usage_00546.pdb # 11: usage_00562.pdb # 12: usage_00628.pdb # # Length: 51 # Identity: 0/ 51 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 51 ( 5.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 51 ( 45.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 --GVEYLNNLTQINFSN-NQLT--D---IT--PLK-----NLTKLVDILM- 35 usage_00128.pdb 1 -GVFDKLTNLTELDLSY-NQLQ--S---LPKGVFD-----KLTQLKDLRL- 38 usage_00173.pdb 1 -GAFSPYKKLRRIDLSN-NQIS--E---LAPDAFQ-----GLRSLNSLVL- 38 usage_00174.pdb 1 -GAFSPYKKLRRIDLSN-NQIS--E---LAPDAFQ-----GLRSLNSLVL- 38 usage_00187.pdb 1 -GVFSGLRNMNCIEMGG-NPLENSG---FEPGAFD-----GL-KLNYLRI- 39 usage_00189.pdb 1 -NAFSTLPSLIKLDLSS-NLLS--S---F---PIT-----GLHGLTHLKL- 35 usage_00245.pdb 1 -GAFKGFPYLEELRLAG-NDLS--I---IHPMALS-----GLKELKVLTL- 38 usage_00253.pdb 1 PKELSNYKHLTLIDLSN-NRIS--T---LSNQSFS-----NMTQLLTLIL- 39 usage_00456.pdb 1 ----DRLHGLKRFRFTTRRL-T--H---IPANLLT-----DMRNLSHLELR 36 usage_00546.pdb 1 -SMFKQFKRLKVIDLSV-NKIS--PLYYFRYDKYARSCRSCY-KYGQTLDL 46 usage_00562.pdb 1 -DGL--SRSLLTLRLSK-NRIT--Q---LPVRAFK-----LP-RLTQLDL- 35 usage_00628.pdb 1 -GAFTGLYSLKVLMLQN-NQLR--H---VPTEALQ-----NLRSLQSLRL- 38 l n l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################