################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:50 2021 # Report_file: c_0302_46.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00215.pdb # 2: usage_00286.pdb # 3: usage_00287.pdb # 4: usage_00288.pdb # 5: usage_00303.pdb # # Length: 167 # Identity: 80/167 ( 47.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 125/167 ( 74.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/167 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00215.pdb 1 -RVALVPTMGNLHDGHMKLVDEAKARADVVIVSIFVNPMQFDRPDDLVR--------YPR 51 usage_00286.pdb 1 -RIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQF--------ERPDDLAHYPR 51 usage_00287.pdb 1 -RIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQF--------ERPDDLAHYPR 51 usage_00288.pdb 1 -RIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQF--------ERPDDLAHYPR 51 usage_00303.pdb 1 GKVAFVPTMGNLHEGHLALVREARKRADNVVVSIFVNRLQF--------G-------YPR 45 r AlVPTMGNLHeGHm LVdEAk RADvVvV IFVNplQF YPR usage_00215.pdb 52 TLQEDCEKLNKRKVDYVFAPAVEEIYPHGLEGQ-TYVDVPGLSTMLEGASRPGHFRGVST 110 usage_00286.pdb 52 TLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQ-TYVDVPALSTILEGASRPGHFRGVST 110 usage_00287.pdb 52 TLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQ-TYVDVPALSTILEGASRPGHFRGVST 110 usage_00288.pdb 52 TLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQ-TYVDVPALSTILEGASRPGHFRGVST 110 usage_00303.pdb 46 TLQQDADKLAAEGVAVVFAPDEKELYPNVE--QRYNVEPPHLQNELCGKFRPGHFRGVAT 103 TLQeDceKL g d VFAPa iYP gl Q tyVdvP Lst LeGasRPGHFRGVsT usage_00215.pdb 111 IVSKLFNLIQPDIACFGEKDFQQLALIRKMVADMSYDIEIVGVP--- 154 usage_00286.pdb 111 IVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVR 157 usage_00287.pdb 111 IVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVP--- 154 usage_00288.pdb 111 IVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVG----- 152 usage_00303.pdb 104 VVSKLFNIVLPDVACFGKKDYQQLAVIKGLTEDLNFDIEIVPVD--- 147 iVSKLFNliqPDvACFGeKDyQQLAlIrkmvaDm yDI IVg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################