################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:06:02 2021 # Report_file: c_1232_65.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00147.pdb # 2: usage_00171.pdb # 3: usage_00172.pdb # 4: usage_00225.pdb # 5: usage_00227.pdb # 6: usage_00228.pdb # 7: usage_00343.pdb # 8: usage_00368.pdb # 9: usage_00395.pdb # 10: usage_00396.pdb # 11: usage_00409.pdb # 12: usage_00410.pdb # 13: usage_00411.pdb # 14: usage_00998.pdb # 15: usage_00999.pdb # 16: usage_01060.pdb # 17: usage_01089.pdb # 18: usage_01118.pdb # # Length: 26 # Identity: 20/ 26 ( 76.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 26 ( 76.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 26 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00147.pdb 1 PVVMKDNKAWVSDTFINDVFQ----- 21 usage_00171.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00172.pdb 1 -VVMKDNKAWVSDTFINDVFQSGLDQ 25 usage_00225.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00227.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00228.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00343.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00368.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00395.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00396.pdb 1 PVVMKDNKAWVSDTFINDVFQ----- 21 usage_00409.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00410.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00411.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_00998.pdb 1 PVVMKDNKAWVSDTFINDVFQ----- 21 usage_00999.pdb 1 PVVMKDNKAWVSDTFINDVFQS---- 22 usage_01060.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_01089.pdb 1 PVVMKDNKAWVSDTFINDVFQSGLDQ 26 usage_01118.pdb 1 PVVMKDNKAWVSDTFINDVFQS---- 22 VVMKDNKAWVSDTFINDVFQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################