################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:31 2021 # Report_file: c_1483_172.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00342.pdb # 2: usage_00549.pdb # 3: usage_00581.pdb # 4: usage_00589.pdb # 5: usage_00590.pdb # 6: usage_00623.pdb # 7: usage_01200.pdb # 8: usage_01380.pdb # 9: usage_01381.pdb # 10: usage_01382.pdb # 11: usage_01383.pdb # 12: usage_01734.pdb # 13: usage_01735.pdb # 14: usage_02055.pdb # 15: usage_02355.pdb # 16: usage_02356.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 33 ( 6.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 33 ( 57.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 -------TRAALM----MGINRGTLRKKLKKY- 21 usage_00549.pdb 1 ---ISTAVIDAIN----SGATLKDINA------ 20 usage_00581.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 usage_00589.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 usage_00590.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 usage_00623.pdb 1 -------SQEAQKVGINPGDVLRNVIDKLG--- 23 usage_01200.pdb 1 VEE---RVMELIT----SG-DVYNRLAKSI--- 22 usage_01380.pdb 1 ------QTRAALM----MGINRGTLRKKLKKY- 22 usage_01381.pdb 1 ------QTRAALM----MGINRGTLRKKLKKY- 22 usage_01382.pdb 1 ------QTRAALM----MGINRGTLRKKLKKY- 22 usage_01383.pdb 1 ------QTRAALM----MGINRGTLRKKLKKY- 22 usage_01734.pdb 1 -------TRAALM----MGINRGTLRKKLKKY- 21 usage_01735.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 usage_02055.pdb 1 --------QAALI----LNSKRGFLKSV----- 16 usage_02355.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 usage_02356.pdb 1 -------TRAALM----MGINRGTLRKKLKKYG 22 a g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################