################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:30:59 2021 # Report_file: c_1060_4.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00022.pdb # 6: usage_00028.pdb # 7: usage_00036.pdb # 8: usage_00037.pdb # 9: usage_00041.pdb # 10: usage_00044.pdb # 11: usage_00045.pdb # 12: usage_00048.pdb # 13: usage_00053.pdb # 14: usage_00054.pdb # 15: usage_00056.pdb # 16: usage_00067.pdb # 17: usage_00069.pdb # 18: usage_00070.pdb # 19: usage_00088.pdb # 20: usage_00111.pdb # 21: usage_00119.pdb # 22: usage_00122.pdb # 23: usage_00123.pdb # 24: usage_00124.pdb # 25: usage_00133.pdb # 26: usage_00134.pdb # 27: usage_00135.pdb # 28: usage_00136.pdb # 29: usage_00137.pdb # 30: usage_00140.pdb # 31: usage_00143.pdb # 32: usage_00158.pdb # 33: usage_00162.pdb # # Length: 31 # Identity: 8/ 31 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 31 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 31 ( 25.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 QADDAAFYYCQRIYNSPYTFGAGTKLELIRA 31 usage_00006.pdb 1 QADDAAFYYCQRIYNSPYTFGAGTKLELIRA 31 usage_00012.pdb 1 EAEDAATYYCQQWSSHPQTFGGGTKLEI--- 28 usage_00013.pdb 1 EAEDAATYYCQQWSSHPQTFGGGTKLEILRA 31 usage_00022.pdb 1 QPEDFATYYCQQSYATLPTFEQGTKVEIKRT 31 usage_00028.pdb 1 QAEDLAVYYCKQSYDL-PTFGAGTKLELKRS 30 usage_00036.pdb 1 EPEDFAVYYCQQYDNSVCTFGQGTKLEIKRT 31 usage_00037.pdb 1 EPEDFAVYYCQQYDNSVCTFGQGTKLEIKRT 31 usage_00041.pdb 1 -PEDFATYYCQQYNIYPYTFGQGTKLEIKRT 30 usage_00044.pdb 1 EAEDAATYYCQQWSSHPQTFGGGTKLEILR- 30 usage_00045.pdb 1 EAEDAATYYCQQWSSHPQTFGGGTKLEILRA 31 usage_00048.pdb 1 QAEDLAVYYCKQSYNL-RTFGGGTKLEIKRA 30 usage_00053.pdb 1 -AEDLAVYYCKQSYNL-WTFGGGTKLEIKRA 29 usage_00054.pdb 1 -AEDLAVYYCKQSYNL-WTFGGGTKLEIKRA 29 usage_00056.pdb 1 QAEDLAVYYCQNDYTYPLTFGAGTKLELKRT 31 usage_00067.pdb 1 QAEDQAVYYCKQAYIPPLTFGAGTKLELKR- 30 usage_00069.pdb 1 QAEDQADYFCQQHYRAPRTFGGGTKLEIK-- 29 usage_00070.pdb 1 -AEDQADYFCQQHYRAPRTFGGGTKLEIK-- 28 usage_00088.pdb 1 KAEDLAVYYCQHFYIYPYTFGGGTKLEIKRA 31 usage_00111.pdb 1 QAEDLAVYYCKQSYNL-RTFGGGTKLELK-- 28 usage_00119.pdb 1 EAEDAATYFCQQWSNHPPTFGGGTKLEIDR- 30 usage_00122.pdb 1 QSEDLADYFCQQYSSYPLTFGAGTKLEL--- 28 usage_00123.pdb 1 QSEDLADYFCQQYSSYPLTFGAGTKLEL--- 28 usage_00124.pdb 1 QSEDLADYFCQQYSSYPLTFGAGTKLEL--- 28 usage_00133.pdb 1 EPEDFGIYYCQQY----EFFGQGTKVEVD-- 25 usage_00134.pdb 1 EPEDFGIYYCQQY----EFFGQGTKVEV--- 24 usage_00135.pdb 1 -AEDLAVYYCQNDHSYPLTFGAGTKLEIKRT 30 usage_00136.pdb 1 EEEDAATYYCQQSNEDPFTFGSGTKLEIKR- 30 usage_00137.pdb 1 QAEDLADYYCLQHYISPPTFGAGTKLELKA- 30 usage_00140.pdb 1 -AEDLAVYYCKQSYYHMYTFGSGTKLEIKH- 29 usage_00143.pdb 1 QPEDFATYYCLQHNTYPPTFGQGTKVEI--- 28 usage_00158.pdb 1 QAEDLAVYYCKQSYNL-RTFGGGTKLELK-- 28 usage_00162.pdb 1 KAEDLAVYYCQQYYTYPYTFGGGTKLEINRA 31 D Y C Fg GTK E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################