################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:42 2021 # Report_file: c_0802_33.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00015.pdb # 6: usage_00016.pdb # 7: usage_00038.pdb # 8: usage_00039.pdb # 9: usage_00513.pdb # # Length: 80 # Identity: 46/ 80 ( 57.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 80 ( 62.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 80 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 --K--YLSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK- 53 usage_00009.pdb 1 --K--YLSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK- 53 usage_00010.pdb 1 GKK--YLSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK- 55 usage_00011.pdb 1 --K--YLSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK- 53 usage_00015.pdb 1 ---TYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQ 57 usage_00016.pdb 1 ---TYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQ 57 usage_00038.pdb 1 ---KYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKM 57 usage_00039.pdb 1 ---KYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKM 57 usage_00513.pdb 1 GKT--YLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLG-KPLPTFCNDVIK-Q 56 LS TWNAP EAFT QFFHGVGVDGVYLPFHKANQFLG PLPTF ndvi usage_00008.pdb 54 PDVPRYTEEYRKHLVEIFG- 72 usage_00009.pdb 54 PDVPRYTEEYRKHLVEIFG- 72 usage_00010.pdb 56 PDVPRYTEEYRKHLVEIFG- 74 usage_00011.pdb 54 PDVPRYTEEYRKHLVEIFG- 72 usage_00015.pdb 58 PDIEGDIARYRQHLAE---- 73 usage_00016.pdb 58 PDIEGDIARYRQHLAE---- 73 usage_00038.pdb 58 PDVPRYTEEYRKHLVEIFG- 76 usage_00039.pdb 58 PDVPRYTEEYRKHLVEIFG- 76 usage_00513.pdb 57 PDIEGDIARYRQHLAENVNS 76 PD YR HL E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################