################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:19 2021 # Report_file: c_0458_22.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00042.pdb # 5: usage_00093.pdb # 6: usage_00121.pdb # 7: usage_00184.pdb # 8: usage_00185.pdb # # Length: 83 # Identity: 8/ 83 ( 9.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 83 ( 20.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 83 ( 13.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 PVVVFSKT-----YCGYCNRVKQLLTQVGA-SYKVVELDELSDGSQLQSALAHWTGRGTV 54 usage_00040.pdb 1 PVVVFSKT-----YCGYCNRVKQLLTQVGA-SYKVVELDELSDGSQLQSALAHWTGRGTV 54 usage_00041.pdb 1 RVVIFSKS-----YCPHSTRVKELFSSLGV-ECNVLELDQVDDGARVQEVLSEITNQKTV 54 usage_00042.pdb 1 RVVIFSKS-----YCPHSTRVKELFSSLGV-ECNVLELDQVDDGARVQEVLSEITNQKTV 54 usage_00093.pdb 1 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVL-D--DPELRQGIKDYSNWPTI 57 usage_00121.pdb 1 KVVVFSWV-----TCPYCVRAEKLLHARTK-DITVHYVDKMSEGEQLRGEIYQAYKHETV 54 usage_00184.pdb 1 CVVIFSKT-----TCPYCKMAKGVFNEIGA-TYKVVELDEHNDGRRLQETLAELTGARTV 54 usage_00185.pdb 1 CVVIFSKT-----TCPYCKMAKGVFNEIGA-TYKVVELDEHNDGRRLQETLAELTGARTV 54 VV Fsk C g v d g Tv usage_00039.pdb 55 PNVFIGGKQIGGCDTVVEKHQRN 77 usage_00040.pdb 55 PNVFIGGKQIGGCDTVVEKHQRN 77 usage_00041.pdb 55 PNIFVNKVHVGGCDQTFQAYQS- 76 usage_00042.pdb 55 PNIFVNKVHVGGCDQTFQAYQS- 76 usage_00093.pdb 58 PQVYLNGEFVGGCDILLQMHQ-- 78 usage_00121.pdb 55 PAIFINGNFIGGCSDLEALDKEG 77 usage_00184.pdb 55 PRVFINGQCIGGGSDTKQLHQQG 77 usage_00185.pdb 55 PRVFINGQCIGGGSDTKQLHQQG 77 P f GG q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################