################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:07 2021 # Report_file: c_0858_4.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00027.pdb # 4: usage_00028.pdb # 5: usage_00029.pdb # 6: usage_00030.pdb # 7: usage_00039.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # 10: usage_00042.pdb # 11: usage_00093.pdb # 12: usage_00174.pdb # 13: usage_00177.pdb # 14: usage_00178.pdb # 15: usage_00179.pdb # 16: usage_00205.pdb # 17: usage_00206.pdb # 18: usage_00247.pdb # 19: usage_00282.pdb # # Length: 105 # Identity: 34/105 ( 32.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/105 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/105 ( 15.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 SLLQLRKMIKKMTNKEPIL-SYSKYGCNCGM---GKPVDATDTCCSIHNCCYGKVTSCST 56 usage_00015.pdb 1 SLLQLRKMIKKMTNKEPIL-SYSKYGCNCGM---GKPVDATDTCCSIHNCCYGKV--CST 54 usage_00027.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00028.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00029.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00030.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00039.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDP 58 usage_00040.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDP 58 usage_00041.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDP 58 usage_00042.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDP 58 usage_00093.pdb 1 SLVQFETLIMKIAGRSGLL-WYSAYGCYCGWGGHGLPQDATDRCCFVHDCCYGKATDCNP 59 usage_00174.pdb 1 SLIQFETLIMKVVKK-SGMFWYSAYGCYCGWGGHGRPQDATDRCCFVHDCCYGKVTGCDP 59 usage_00177.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00178.pdb 1 -LLQFRKMIKKMTGKEPVV-SYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDP 58 usage_00179.pdb 1 -LFQFAEMIVKMTGKNPLS-SYSDYGCYCGWGGKGKPQDATDRCCFVHDCCYEKVKSCKP 58 usage_00205.pdb 1 SLVQFETLIMKVAKKSGMQ-WYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDP 59 usage_00206.pdb 1 SLVQFETLIMKVAKKSGMQ-WYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDP 59 usage_00247.pdb 1 NLMQFELLIMKVAGRSGIV-WYSDYGCFCGKGGHGRPQDATDRCCFVHDCCYGKVNGCDP 59 usage_00282.pdb 1 -LYQFGRMIWNRTGKLPIL-SYGSYGCYCGWGGQGPPKDATDRCCLVHDCCYTRVGDCSP 58 L Q I k Y YGC CG G P ATD CC H CCY kv C usage_00014.pdb 57 KWDSYSYSWENGDIVCD-E--KHPCKDVCECDKAVATCFRDN--- 95 usage_00015.pdb 55 KWDSYSYSWENGDIVCD-E--KHPCKDVCECDKAVATCFRDN--- 93 usage_00027.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00028.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00029.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00030.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00039.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00040.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00041.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00042.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00093.pdb 60 KTVSYTYSEENGEIICGGDDP--CGTQICECDKAAAICFRDN--- 99 usage_00174.pdb 60 KMDSYTYSEENGDIVCGGDDP--CKREICECDRVAADCFRDN--- 99 usage_00177.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00178.pdb 59 KWDDYTYSWKNGTIVCGGDDP--CKKEVCECDKAAAICFRDN--- 98 usage_00179.pdb 59 KLSLYSYSFQNGGIVCGDNHS--CKRAVCECDRVAATCFRDN--- 98 usage_00205.pdb 60 KMDVYSFSEENGDIVCGGDDP--CKKEICECDRAAAICFRDNLNT 102 usage_00206.pdb 60 KMDVYSFSEENGDIVCGGDDP--CKKEICECDRAAAICFRDNLNT 102 usage_00247.pdb 60 KEDFYRYSSNNGDIVCEANNP--CTKEICECDKAAAICFRDNKDT 102 usage_00282.pdb 59 KMTLYSYRFENGDIICDNKDP--CKRAVCECDREAAICLGEN--- 98 K Y s NG I C CECD A CfrdN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################