################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:23:11 2021 # Report_file: c_0031_14.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00052.pdb # 2: usage_00053.pdb # 3: usage_00067.pdb # 4: usage_00068.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00071.pdb # 8: usage_00072.pdb # 9: usage_00079.pdb # 10: usage_00081.pdb # 11: usage_00082.pdb # 12: usage_00097.pdb # 13: usage_00098.pdb # 14: usage_00157.pdb # 15: usage_00168.pdb # # Length: 242 # Identity: 14/242 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/242 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/242 ( 17.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 ---------VIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSD 51 usage_00053.pdb 1 ---------VIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSD 51 usage_00067.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00068.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00069.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00070.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00071.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00072.pdb 1 --------IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 52 usage_00079.pdb 1 --IKIGTS-------ALTGPYNEFGEGNRRAVELAVEQWNAKGGINGKKIEIALLDDQLN 51 usage_00081.pdb 1 --------ITIGVIAPLTGPVAAFGDQVKKGAETAVEVINKAGGIKGEKVVLKFADDAGE 52 usage_00082.pdb 1 --------ITIGVIAPLTGPVAAFGDQVKKGAETAVEVINKAGGIKGEKVVLKFADDAGE 52 usage_00097.pdb 1 ED------IKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD 54 usage_00098.pdb 1 --------IKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD 52 usage_00157.pdb 1 --------VKIAVILP-TGGISAFGR-VWEGIQIAHEEKP---TVLGEEVELVLLDTRSE 47 usage_00168.pdb 1 --------IKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD 52 Gp G g A n gi G Dd usage_00052.pdb 52 PKQGISVANKFVA-DG-VKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTER--- 106 usage_00053.pdb 52 PKQGISVANKFVA-DG-VKFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTER--- 106 usage_00067.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00068.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00069.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00070.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00071.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00072.pdb 53 PKQAVAVANKIVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR--- 107 usage_00079.pdb 52 PDRAVQNIRAILD-NKDIVGIIGPAGSGP-LAV-IDVQADGRP-YNPIAQTPVVTYPGEK 107 usage_00081.pdb 53 PKQGVSAANQIVG-DG-IKFVVGLVTTGVAVPVSDVLSENGVLMVTPTATGPDLTAR--- 107 usage_00082.pdb 53 PKQGVSAANQIVG-DG-IKFVVGLVTTGVAVPVSDVLSENGVLMVTPTATGPDLTAR--- 107 usage_00097.pdb 55 PKQAVAVANKVVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTAR--- 109 usage_00098.pdb 53 PKQAVAVANKVVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTAR--- 107 usage_00157.pdb 48 KTEAANAAARAIDKEK-VLAIIGEVASAHSLAIAPIAEENKVP-VTPASTNPLVTQ---- 101 usage_00168.pdb 53 PKQAVAVANKVVN-DG-IKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTAR--- 107 p a G g P at P T usage_00052.pdb 107 ----GLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDK-TPYGQGLADETKKAANA 161 usage_00053.pdb 107 ----GLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDK-TPYGQGLADETKKAANA 161 usage_00067.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00068.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00069.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00070.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00071.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00072.pdb 108 ----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 162 usage_00079.pdb 108 TGEKPRPNVFSFALQNDIEAVA-GEYLAK--KFKRVGIIHES-TAYGVTGVDYLAASIAK 163 usage_00081.pdb 108 ----GLENVFRTCGRDGQQAEVMADYVLKNMKDKKVAVIHDK-GAYGKGLADAFKAAINK 162 usage_00082.pdb 108 ----GLENVFRTCGRDGQQAEVMADYVLKNMKDKKVAVIHDK-GAYGKGLADAFKAAINK 162 usage_00097.pdb 110 ----GYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDK-QQYGEGLARAVQDGLKK 164 usage_00098.pdb 108 ----GYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDK-QQYGEGLARAVQDGLKK 162 usage_00157.pdb 102 ----GRKFVSRVCFIDPFQGAA-AVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTE 156 usage_00168.pdb 108 ----GYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDK-QQYGEGLARAVQDGLKK 162 g r d q y k hd Yg gl usage_00052.pdb 162 AGVT-EVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLV 220 usage_00053.pdb 162 AGVT-EVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLV 220 usage_00067.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00068.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00069.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00070.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00071.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00072.pdb 163 ANAN-VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 221 usage_00079.pdb 164 NGGAKPVATDSYNQGAQDT-AQVAR-KRANVDAIAAIGLGKDLAVLRRTARLN-VNVPLA 220 usage_00081.pdb 163 GGIT-EVHYDSVTPGDKDFSALVTKLKSAGAEVVYFGGYHAEGGLLSRQLHDAGMQALVL 221 usage_00082.pdb 163 GGIT-EVHYDSVTPGDKDFSALVTKLKSAGAEVVYFGGYHAEGGLLSRQLHDAGMQALVL 221 usage_00097.pdb 165 GNAN-VVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFM 223 usage_00098.pdb 163 GNAN-VVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFM 221 usage_00157.pdb 157 LGGQ-V-KRVFFRSGDQDFSAQLSV-ASFNPDAIYITGYYPEIALISRQARQLGFTGYIL 213 usage_00168.pdb 163 GNAN-VVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFM 221 G Df k y G e Rq usage_00052.pdb 221 SG 222 usage_00053.pdb 221 SG 222 usage_00067.pdb 222 GP 223 usage_00068.pdb 222 GP 223 usage_00069.pdb 222 GP 223 usage_00070.pdb 222 GP 223 usage_00071.pdb 222 GP 223 usage_00072.pdb 222 GP 223 usage_00079.pdb 221 AS 222 usage_00081.pdb 222 GG 223 usage_00082.pdb 222 GG 223 usage_00097.pdb 224 GP 225 usage_00098.pdb 222 GP 223 usage_00157.pdb 214 AG 215 usage_00168.pdb 222 GP 223 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################