################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:31:45 2021 # Report_file: c_0215_5.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00039.pdb # 2: usage_00059.pdb # 3: usage_00060.pdb # 4: usage_00071.pdb # 5: usage_00072.pdb # 6: usage_00073.pdb # 7: usage_00080.pdb # 8: usage_00081.pdb # 9: usage_00089.pdb # 10: usage_00090.pdb # 11: usage_00091.pdb # # Length: 145 # Identity: 48/145 ( 33.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/145 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/145 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 GSEEYGNFLVTQKSVQVLAYYTVRNFTLRNTK---IGRVVTQYHYTQWPDMGVPEYSLPV 57 usage_00059.pdb 1 GTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLL 60 usage_00060.pdb 1 GTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLL 60 usage_00071.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK---VERVVIQYHYTQWPDMGVPEYALPV 57 usage_00072.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK---NERVVIQYHYTQWPDMGVPEYALPV 57 usage_00073.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK---NERVVIQYHYTQWPDMGVPEYALPV 57 usage_00080.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK---NERVVIQYHYTQWPD-GVPEYALPV 56 usage_00081.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK---NERVVIQYHYTQWPD-GVPEYALPV 56 usage_00089.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKQNERVVIQYHYTQWPDMGVPEYALPV 60 usage_00090.pdb 1 NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKQNERVVIQYHYTQWPDMGVPEYALPV 60 usage_00091.pdb 1 NTEEYGNIIVTLKSTKIHACYTVRRFSIRNTKV-QNERVVIQYHYTQWPDMGVPEYALPV 59 G V k Y i N K R V T WPD GVPE usage_00039.pdb 58 LTFVRKAAYAKRHAVGPVVVHCSAGVGRTGTYIVLDSMLQQIQHEGTVNIFGFLKHIRSQ 117 usage_00059.pdb 61 LKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDA-LEGLEAENKVDVYGYVVKLRRQ 119 usage_00060.pdb 61 LKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDA-LEGLEAENKVDVYGYVVKLRRQ 119 usage_00071.pdb 58 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 117 usage_00072.pdb 58 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 117 usage_00073.pdb 58 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 117 usage_00080.pdb 57 LTFVRRSSAAR-PETGPVLVHCSAGVGRTGTYIVIDS-LQQIKDKSTVNVLGFLKHIRTQ 114 usage_00081.pdb 57 LTFVRRSSAAR-PETGPVLVHCSAGVGRTGTYIVIDS-LQQIKDKSTVNVLGFLKHIRTQ 114 usage_00089.pdb 61 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 120 usage_00090.pdb 61 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 120 usage_00091.pdb 60 LTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ 119 L Rr a GP VH SAGVGRTGTYI iD L V v G R Q usage_00039.pdb 118 RNYLVQTEEQYVFIHDTLVEAILS- 141 usage_00059.pdb 120 RCL-VQVEAQYILIHQALVEYNQ-- 141 usage_00060.pdb 120 RCL-VQVEAQYILIHQALVEYNQ-- 141 usage_00071.pdb 118 RNYLVQTEEQYIFIHDALLEAILG- 141 usage_00072.pdb 118 RNYLVQTEEQYIFIHDALLEAILG- 141 usage_00073.pdb 118 RNYLVQTEEQYIFIHDALLEAILG- 141 usage_00080.pdb 115 RNYLVQTEEQYIFIHDALLEAILG- 138 usage_00081.pdb 115 RNYLVQTEEQYIFIHDALLEAILG- 138 usage_00089.pdb 121 RNYLVQTEEQYIFIHDALLEAILG- 144 usage_00090.pdb 121 RNYLVQTEEQYIFIHDALLEAILGK 145 usage_00091.pdb 120 RNYLVQTEEQYIFIHDALLEAILG- 143 R VQ E QYi IH aL E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################