################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:45 2021 # Report_file: c_0940_52.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00300.pdb # 2: usage_00301.pdb # 3: usage_00346.pdb # 4: usage_00362.pdb # 5: usage_00363.pdb # 6: usage_00364.pdb # 7: usage_00482.pdb # 8: usage_01309.pdb # 9: usage_01516.pdb # 10: usage_01522.pdb # 11: usage_01523.pdb # # Length: 59 # Identity: 1/ 59 ( 1.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 59 ( 15.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 59 ( 62.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00300.pdb 1 GQKLEAVDKKNPQLICCATVDAIK-------DDQIHVTFDGWRGA--------FDYWCN 44 usage_00301.pdb 1 GQKLEAVDKKNPQLICCATVDAIK-------DDQIHVTFDGWRGA--------FDYWCN 44 usage_00346.pdb 1 -----------------GRLLGIFENQDRKHR-TYVYVL-T--VTEILEDWGRKREWFK 38 usage_00362.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWCD 44 usage_00363.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWC- 43 usage_00364.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWCD 44 usage_00482.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWCD 44 usage_01309.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWCD 44 usage_01516.pdb 1 GMKLEAVDRMNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWCD 44 usage_01522.pdb 1 GKLEAV-D-RNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWC- 41 usage_01523.pdb 1 GKLEAV-D-RNPSLVCVASVTDVV-------DSRFLVHFDNWDDT--------YDYWC- 41 a v d v f dyWc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################