################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:47 2021 # Report_file: c_1408_104.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00041.pdb # 2: usage_00542.pdb # 3: usage_00671.pdb # 4: usage_00672.pdb # 5: usage_00674.pdb # 6: usage_00694.pdb # 7: usage_00695.pdb # 8: usage_00696.pdb # 9: usage_00706.pdb # 10: usage_00732.pdb # 11: usage_00871.pdb # 12: usage_01066.pdb # 13: usage_01293.pdb # 14: usage_01322.pdb # 15: usage_01364.pdb # 16: usage_01435.pdb # 17: usage_01472.pdb # 18: usage_01473.pdb # 19: usage_01474.pdb # 20: usage_01503.pdb # 21: usage_01518.pdb # # Length: 49 # Identity: 7/ 49 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 49 ( 63.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 49 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00542.pdb 1 ----IPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 34 usage_00671.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00672.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00674.pdb 1 ----IPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 34 usage_00694.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00695.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVI----------- 33 usage_00696.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00706.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00732.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_00871.pdb 1 ---LIPMFETVTKLFP-MVEEIMLQPLWESRDRYEELKRIDDAMKELQK 45 usage_01066.pdb 1 NAVAIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 38 usage_01293.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01322.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01364.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01435.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01472.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01473.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 usage_01474.pdb 1 ----IPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 34 usage_01503.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIR---------- 34 usage_01518.pdb 1 ---AIPCYTTLTQIL-PPT-EPLLKACRDNLSQWEKVIRG--------- 35 IPcytTlTqil pt EplLkacrdnlsqwEkvi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################