################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:19 2021 # Report_file: c_0145_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00051.pdb # 2: usage_00072.pdb # 3: usage_00337.pdb # 4: usage_00338.pdb # 5: usage_00352.pdb # 6: usage_00436.pdb # 7: usage_00459.pdb # # Length: 119 # Identity: 30/119 ( 25.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/119 ( 27.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/119 ( 10.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -QVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGR 59 usage_00072.pdb 1 -QVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWFKQDTGKGLVSLTVLVDQKDKTSNGR 59 usage_00337.pdb 1 --LNQSPQSMFIQEGEDVSMNCTSSSI-FNTWLWYKQEPGEGPVLLIALYKAGELTSNGR 57 usage_00338.pdb 1 -QLNQSPQSMFIQEGEDVSMNCTSSSI-FNTWLWYKQEPGEGPVLLIALYKAGELTSNGR 58 usage_00352.pdb 1 -LLEQSPQFLSIQEGENLTVYCNSSSV-FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKR 58 usage_00436.pdb 1 QLLEQSPQFLSIQEGENLTVYCNSSSV-FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKR 59 usage_00459.pdb 1 --LNQSPQSMFIQEGEDVSMNCTSSSI-FNTWLWYKQDPGEGPVLLIALYKAGELTSNGR 57 QSPQ GE C S Wy Q G G VlL R usage_00051.pdb 60 YSATLDKDAKHSTLHITATLLDDTATYFCVVGDR------GSALFGSGTQLIVIP---- 108 usage_00072.pdb 60 YSATLDKDAKHSTLHITATLLDDTATYICVVGDR-GS-ALGRLHFGAGTQLIVIPDIQN 116 usage_00337.pdb 58 LTAQFGITRKDSFLNISASIPSDVGIYFCAGPGGSS-NT-GKLIFGQGTTLQVKP---- 110 usage_00338.pdb 59 LTAQFGITRKDSFLNISASIPSDVGIYFCAGPGGSS-NT-GKLIFGQGTTLQVKP---- 111 usage_00352.pdb 59 LTFQFGDARKDSSLHITAAQPGDTGLYLCAGAIGPS-NT-GKLIFGKGTKLSVKP---- 111 usage_00436.pdb 60 LTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGS----Q-GNLIFGKGTKLSVKP---- 109 usage_00459.pdb 58 LTAQFGITRKDSFLNISASIPSDVGIYFCAGGTG------NQFYFGTGTSLTVIP---- 106 K S L I A D Y C g FG GT L V P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################