################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:24 2021 # Report_file: c_0048_17.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00039.pdb # 2: usage_00040.pdb # 3: usage_00075.pdb # 4: usage_00162.pdb # # Length: 246 # Identity: 66/246 ( 26.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 205/246 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/246 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00039.pdb 1 -KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE 50 usage_00040.pdb 1 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE 51 usage_00075.pdb 1 -PVLVTGGARRIGKAIVEDLASHGFPVAIHCNRSLDEGEAIANRINDSGGNACVVQADLE 59 usage_00162.pdb 1 -KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDLE 50 kaLVTGGsRgIGrAIaEaLvarGyrVAIasrnpeeaaqslg AvplptDLE usage_00039.pdb 51 KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 110 usage_00040.pdb 52 KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 111 usage_00075.pdb 60 G-DVRGLVKQASDRIGPIRLLVNNASLFQEDKVGALDMALWDRHFAVHLKTPVILAEDMR 118 usage_00162.pdb 51 KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 110 k DpkGLVKrAlealGglhvLVhaAavnvrkpaleLsyeeWrRvlylHLdvaflLAqaaa usage_00039.pdb 111 PHM-AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 167 usage_00040.pdb 112 PHM-AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 168 usage_00075.pdb 119 KALP-EDQDGLVVNIIDQRVWKLNP----QFFSYTLSKTALWNATRTLAQALAP-RIRVN 172 usage_00162.pdb 111 PH--AEAGWGRVLFIGSVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 166 ph EagwGrVlfIgsvttfta pipaYTtaKTALlglTRaLAkewAr gIRVN usage_00039.pdb 168 LLCPGYVETEF--TLPLRQ-NPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTG 224 usage_00040.pdb 169 LLCPGYVET-------------ELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTG 215 usage_00075.pdb 173 AIAPGPTL-PSER-----QRPEDFER-QVSKLPLQRAPELPEFGRTVRYFWE-N-RSITG 223 usage_00162.pdb 167 LLCPGYVETEF--TLPLRQ-NPELYEPITARIP-GRWARPEEIARVAAVLCGDEAEYLTG 222 llcPGyve elye itariP gRwarpeEiaRvaavlcg e eylTG usage_00039.pdb 225 QAVAVD 230 usage_00040.pdb 216 QAVAVD 221 usage_00075.pdb 224 QMIA-- 227 usage_00162.pdb 223 QAVAVD 228 QavA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################