################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:07 2021 # Report_file: c_0693_18.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00217.pdb # 2: usage_00218.pdb # 3: usage_00219.pdb # 4: usage_00220.pdb # 5: usage_00221.pdb # 6: usage_00222.pdb # 7: usage_00223.pdb # 8: usage_00240.pdb # 9: usage_00348.pdb # # Length: 62 # Identity: 5/ 62 ( 8.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 62 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 62 ( 35.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00217.pdb 1 ----NVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKVVEF 46 usage_00218.pdb 1 -ENLNVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 46 usage_00219.pdb 1 ----NVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 43 usage_00220.pdb 1 ----NVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 43 usage_00221.pdb 1 ----NVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 43 usage_00222.pdb 1 VENLNVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 47 usage_00223.pdb 1 ----NVKEQVVA----GIMYYITLAATDD--A-GKKKIYKAKIWVKE---WEDFKKV--- 43 usage_00240.pdb 1 ----KAKEQANLYLSTPIDTMYYLTLEAKDGGKKKLYEAKVWVKHIMYYPKTANFKE-L- 54 usage_00348.pdb 1 ---VKAKEQVVS----GMMHYLTVEVNDA--GKKKLYEAKVWEQV-----WMNFRQ---- 42 KEQvv gim y tl d K K v w f k usage_00217.pdb 47 KL 48 usage_00218.pdb -- usage_00219.pdb -- usage_00220.pdb -- usage_00221.pdb -- usage_00222.pdb -- usage_00223.pdb -- usage_00240.pdb -- usage_00348.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################