################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:01:06 2021 # Report_file: c_1090_17.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00004.pdb # 2: usage_00012.pdb # 3: usage_00039.pdb # 4: usage_00044.pdb # 5: usage_00045.pdb # 6: usage_00087.pdb # 7: usage_00110.pdb # 8: usage_00131.pdb # 9: usage_00166.pdb # 10: usage_00198.pdb # 11: usage_00205.pdb # 12: usage_00206.pdb # 13: usage_00207.pdb # 14: usage_00217.pdb # 15: usage_00218.pdb # 16: usage_00219.pdb # 17: usage_00239.pdb # 18: usage_00240.pdb # 19: usage_00241.pdb # 20: usage_00244.pdb # 21: usage_00245.pdb # 22: usage_00246.pdb # 23: usage_00257.pdb # 24: usage_00277.pdb # 25: usage_00293.pdb # 26: usage_00298.pdb # 27: usage_00299.pdb # 28: usage_00307.pdb # 29: usage_00308.pdb # # Length: 43 # Identity: 7/ 43 ( 16.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 43 ( 25.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 43 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -KSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAF---VYPK 39 usage_00012.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00039.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00044.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 usage_00045.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 usage_00087.pdb 1 NKTGDARIRAGVPADWRVADKTGTGDYG--TANDI-------- 33 usage_00110.pdb 1 NTTGDALIRAGVPEGWEVADKTGAGSYG--TRNDIA------- 34 usage_00131.pdb 1 NTTGSASIRAGLPKSWVVGDKTGSGDYG--TTNDIA------- 34 usage_00166.pdb 1 NTTGDALIRAGVPEGWEVADKTGAGSYG--TRNDI-------- 33 usage_00198.pdb 1 NKTGDARIRAGLPKTWTVGDKTGTNSKY--GAGNDI-A----- 35 usage_00205.pdb 1 NTTGGQSIRAGLPAHWVVGDKTGACDYG--TTNDIA------- 34 usage_00206.pdb 1 NTTGGQSIRAGLPAHWVVGDKTGACDYG--TTNDIA------- 34 usage_00207.pdb 1 NTTGGQSIRAGLPAHWVVGDKTGAGDYG--TTNDIA------- 34 usage_00217.pdb 1 NTTGAASIQAGLPASWVVGDKTGSGGYG--TTNDIA------- 34 usage_00218.pdb 1 NTTGAASIQAGLPASWVVGDKTGSGGYG--TTNDIA------- 34 usage_00219.pdb 1 NTTGAASIQAGLPASWVVGDKTGSGGYG--TTNDIA------- 34 usage_00239.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00240.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00241.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00244.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 usage_00245.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 usage_00246.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 usage_00257.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00277.pdb 1 NTTGAKRIRAGFPADWKVIDKTGTGDYG--RANDIAVVWS--- 38 usage_00293.pdb 1 NTTGGQSIRAGLPAHWVVGDKTGACDYG--TTNDIA------- 34 usage_00298.pdb 1 NTTGDKLIRAGLPAGWRVGDKTGTGSYG--TRNDIA------- 34 usage_00299.pdb 1 NTTGDKLIRAGLPAGWRVGDKTGTGSYG--TRNDIA------- 34 usage_00307.pdb 1 NTTGAASIRAGLPTSWTAGDKTGSGDYG--TTNDIA------- 34 usage_00308.pdb 1 NTTGAASIRAGLPTSWTVGDKTGSGDYG--TTNDIA------- 34 tG I aG P w DKtG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################