################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:58 2021 # Report_file: c_1409_189.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00075.pdb # 2: usage_00076.pdb # 3: usage_00335.pdb # 4: usage_00621.pdb # 5: usage_01266.pdb # 6: usage_01267.pdb # 7: usage_01639.pdb # 8: usage_01821.pdb # # Length: 54 # Identity: 9/ 54 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 54 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 54 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 NEKLEFLGDAVLELFVCEILYKKY-PEAEVGDLARVKSAAASEEVLAMVSRKMN 53 usage_00076.pdb 1 NEKLEFLGDAVLELFVCEILYKKY-PEAEVGDLARVKSAAASEEVLAMVSRKM- 52 usage_00335.pdb 1 -QRLEFLGDAILDYLITKHLYEDP-RQHSPGVLTDLRSALVNNTIFASLAVKYD 52 usage_00621.pdb 1 -ETLEFLGDALVNFFIVDLLVQYS-PNKREGFLSPLKAYLISEEFFNLL----- 47 usage_01266.pdb 1 -ERLEFLGDAVLDLVVGEYLFHKFAKDAEG-DLSKLRAALVNEKSFAKIANSLN 52 usage_01267.pdb 1 NERLEFLGDAVLDLVVGEYLFHKF-AKDAEGDLSKLRAALVNEKSFAKIANSLN 53 usage_01639.pdb 1 -ETLEFLGDALVNFFIVDLLVQYS-PNKREGFLSPLKAYLISEEFFNLLAQKLE 52 usage_01821.pdb 1 YQRLEFLGDAILDYLITKHLYEDP-RQHSPGVLTDLRSALVNNTIFASLAVKYD 53 LEFLGDA L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################