################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:44 2021 # Report_file: c_1153_180.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_01048.pdb # 2: usage_01536.pdb # 3: usage_01591.pdb # 4: usage_01968.pdb # 5: usage_01970.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 54 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 54 ( 40.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01048.pdb 1 --DMVAI-VRY-AYDKRANPQVGVAFPHIKHN------YECLVYVQLPF-M--- 40 usage_01536.pdb 1 --DMVGTFT-D-TED-P---AKFKMKYWG-VAS--FLQKGNDDHWIVD------ 37 usage_01591.pdb 1 VEVTLTM-K-AASGSTG---DQKVQISYYGPKT--PPVKALLYLTAVEISLCAD 47 usage_01968.pdb 1 -DMVVSV-G-TASKELK---DFKVRVSYFGEQEDQALGRSVLYLTGVDISLEVD 48 usage_01970.pdb 1 -DMVVSV-G-TASKELK---DFKVRVSYFGEQEDQALGRSVLYLTGVDISLEVD 48 v v l v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################