################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:56 2021 # Report_file: c_1171_92.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00305.pdb # 2: usage_00306.pdb # 3: usage_00404.pdb # 4: usage_00405.pdb # 5: usage_00562.pdb # 6: usage_00699.pdb # 7: usage_01124.pdb # 8: usage_01622.pdb # 9: usage_01790.pdb # 10: usage_01791.pdb # 11: usage_01920.pdb # # Length: 27 # Identity: 0/ 27 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 27 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 27 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00305.pdb 1 -NFTITVREV-RLS-AGG--RLIVPIT 22 usage_00306.pdb 1 -NFTITVREV-RLS-AGG--RLIVPIT 22 usage_00404.pdb 1 -NFTITVREV-RLS-AGG--RLIVPIT 22 usage_00405.pdb 1 ---TITVREV-RLS-AGG--RLIVPIT 20 usage_00562.pdb 1 -FFYVTQGQE-EIASSGT--SYLNRT- 22 usage_00699.pdb 1 -QNCELRGSSLKLL-PGQ--GLSLAIS 23 usage_01124.pdb 1 GQTGVA-PY--GVR-ARSGAPVATPIT 23 usage_01622.pdb 1 -NFTITVREV-RLS-AGG--RLIVP-- 20 usage_01790.pdb 1 -NFTITVREV-RLS-AGG--RLIVPIT 22 usage_01791.pdb 1 -NFTITVREV-RLS-AGG--RLIVPIT 22 usage_01920.pdb 1 -PTPAVV-HF-KVS-AQG--ITLTDNQ 21 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################