################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:29 2021 # Report_file: c_0194_58.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00015.pdb # 2: usage_00016.pdb # 3: usage_00017.pdb # 4: usage_00019.pdb # 5: usage_00066.pdb # 6: usage_00375.pdb # 7: usage_00377.pdb # # Length: 170 # Identity: 97/170 ( 57.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 110/170 ( 64.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/170 ( 7.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -----KDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTPSEF 55 usage_00016.pdb 1 -----KDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTPSEF 55 usage_00017.pdb 1 -----KDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTPSEF 55 usage_00019.pdb 1 -----KDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTPSEF 55 usage_00066.pdb 1 ----LKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSASKL 56 usage_00375.pdb 1 -----KDKARRAAELGADALLFNVFAYGLDVMQGLAEDPEIPVPIMAHPAVSGAFTSSPF 55 usage_00377.pdb 1 RTADLKDKARRAAELGADALLFNVFAYGLDVMQGLAEDPEIPVPIMAHPAVSGAFTSSPF 60 KdkA RAaelGAD LLFNVFAYGLDV Q L ED EI VPIMAHPA SGA t S f usage_00015.pdb 56 YGVAPSLWLGKLLRLAGADFVLFPSPYGSVALEREQALGIARALTDDQEPFARAFPVPSA 115 usage_00016.pdb 56 YGVAPSLWLGKLLRLAGADFVLFPSPYGSVALEREQALGIARALTDDQEPFARAFPVPSA 115 usage_00017.pdb 56 YGVAPSLWLGKLLRLAGADFVLFPSPYGSVALEREQALGIARALTDDQEPFARAFPVPSA 115 usage_00019.pdb 56 YGVAPSLWLGKLLRLAGADFVLFPSPYGSVALEREQALGIARALTDDQEPFARAFPVPSA 115 usage_00066.pdb 57 YGVSSPLLLGKLLRYAGADFSLFPSPY------KEEALAISKYLTEDDASFKKSFSVPSA 110 usage_00375.pdb 56 YGFSHALLLGKLNRYCGADFSLFPSPYGSVALPRADALAIHEECVRE-DAFNQTFAVPSA 114 usage_00377.pdb 61 YGFSHALLLGKLNRYCGADFSLFPSPYGSVALPRADALAIHEECVRE-DAFNQTFAVPSA 119 YG L LGKL R GADF LFPSPY r AL I F F VPSA usage_00015.pdb 116 GIHPGLVPLIIRDFGLDTIVNAGGGIHGHPDGAIGGGRAFRAAIDAVLAG 165 usage_00016.pdb 116 GIHPGLVPLIIRDFGLDTIVNAGGGIHGHPDGAIGGGRAFRAAIDAVLAG 165 usage_00017.pdb 116 GIHPGLVPLIIRDFGLDTIVNAGGGIHGHPDGAIGGGRAFRAAIDAVLAG 165 usage_00019.pdb 116 GIHPGLVPLIIRDFGLDTIVNAGGGIHGHPDGAIGGGRAFRAAIDAVLAG 165 usage_00066.pdb 111 GIHPGFVPFIVRDFGKDVVINAGGGIHGHPNGAQGGGKAFRTAIDATLQN 160 usage_00375.pdb 115 GIHPGMVPLLMRDFGIDHIINAGGGVHGHPNGAQGGGRAFRAIIDAVLEA 164 usage_00377.pdb 120 GIHPGMVPLLMRDFGIDHIINAGGGVHGHPNGAQGGGRAFRAIIDAVLEA 169 GIHPG VPl RDFG D i NAGGG HGHP GA GGGrAFRa IDAvL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################