################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:53 2021 # Report_file: c_0004_18.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00077.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00290.pdb # 6: usage_00291.pdb # 7: usage_00429.pdb # 8: usage_00430.pdb # # Length: 265 # Identity: 110/265 ( 41.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 110/265 ( 41.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/265 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 usage_00078.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 usage_00079.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 usage_00080.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 usage_00290.pdb 1 -TIQHADSQVNRLEITSDKKYLAAAGHLHVRLYDIRSNNPNPVSSFEGHKGNVTSIAFQQ 59 usage_00291.pdb 1 -TIQHADSQVNRLEITSDKKYLAAAGHLHVRLYDIRSNNPNPVSSFEGHKGNVTSIAFQQ 59 usage_00429.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 usage_00430.pdb 1 RTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHE 60 T QH DSQVN LE T D AAAG H R YD SNNPNP S G N S F usage_00077.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 usage_00078.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 usage_00079.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 usage_00080.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 usage_00290.pdb 60 ENRWMVSSSEDGTIKVWDV-RS-PSVQRNYKHNAPVNEVAIHPNQGELISCDQDGNIRIW 117 usage_00291.pdb 60 ENRWMVSSSEDGTIKVWDV-RS-PSVQRNYKHNAPVNEVAIHPNQGELISCDQDGNIRIW 117 usage_00429.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 usage_00430.pdb 61 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIW 120 RWM ED T WD QR NAP N V HPNQ ELI DQ G I IW usage_00077.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 usage_00078.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 usage_00079.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 usage_00080.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 usage_00290.pdb 118 DLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHT--DASTLEPVT 175 usage_00291.pdb 118 DLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHT--DASTLEPVT 175 usage_00429.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 usage_00430.pdb 121 DL-KTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKT 179 DL QL PE S D S A N GNCYVW L P T usage_00077.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 usage_00078.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 usage_00079.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 usage_00080.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 usage_00290.pdb 176 KFKSHTKYITRVLLSADVKNLATCSADHTARVWNIEDNYQLETTLDGH-------Q-RWV 227 usage_00291.pdb 176 KFKSHTKYITRVLLSADVKNLATCSADHTARVWNIEDNYQLETTLDGH-------Q-RWV 227 usage_00429.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 usage_00430.pdb 180 KIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSN-FSLMTELSIKSGNPGESSRGWM 238 K HT Y S D LATCSAD T W L T L W usage_00077.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 usage_00078.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 usage_00079.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 usage_00080.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 usage_00290.pdb 228 WDCAFSADSAYLVTACSDHYVRLWD 252 usage_00291.pdb 228 WDCAFSADSAYLVTACS-------- 244 usage_00429.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 usage_00430.pdb 239 WGCAFSGDSQYIVTASSDNLARLWC 263 W CAFS DS Y VTA S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################