################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:38 2021 # Report_file: c_1434_271.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_02405.pdb # 2: usage_02406.pdb # 3: usage_02407.pdb # 4: usage_02408.pdb # 5: usage_03460.pdb # 6: usage_03461.pdb # 7: usage_03561.pdb # 8: usage_03562.pdb # 9: usage_03563.pdb # 10: usage_03564.pdb # 11: usage_03565.pdb # 12: usage_03566.pdb # # Length: 97 # Identity: 74/ 97 ( 76.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 97 ( 76.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 97 ( 23.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02405.pdb 1 ------QEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 54 usage_02406.pdb 1 ------QEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 54 usage_02407.pdb 1 ------QEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 54 usage_02408.pdb 1 ------QEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 54 usage_03460.pdb 1 ------QEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 54 usage_03461.pdb 1 LMEEVAQEYHVKLQTALEMLRQKQQEAETERNQVAKRVPKAPPEEKEALIARGKALGEQT 60 usage_03561.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 usage_03562.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 usage_03563.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 usage_03564.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 usage_03565.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 usage_03566.pdb 1 --EEVAQEYHVKLQTALEMLRQKQQEAETERNQVA------------ALIARGKALGEQT 46 QEYHVKLQTALEMLRQKQQEAETERNQVA ALIARGKALGEQT usage_02405.pdb 55 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIENMTL 91 usage_02406.pdb 55 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIENM-- 89 usage_02407.pdb 55 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIENMT- 90 usage_02408.pdb 55 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIENMT- 90 usage_03460.pdb 55 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIEN--- 88 usage_03461.pdb 61 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIEN--- 94 usage_03561.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRI----- 78 usage_03562.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRI----- 78 usage_03563.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRI----- 78 usage_03564.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIE---- 79 usage_03565.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRI----- 78 usage_03566.pdb 47 QYMRELISELEHRLQGSMMDLLQGVDGIIKRIE---- 79 QYMRELISELEHRLQGSMMDLLQGVDGIIKRI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################