################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:55 2021 # Report_file: c_0814_2.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00012.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00032.pdb # 5: usage_00036.pdb # 6: usage_00037.pdb # 7: usage_00042.pdb # 8: usage_00059.pdb # 9: usage_00129.pdb # 10: usage_00142.pdb # 11: usage_00145.pdb # 12: usage_00146.pdb # 13: usage_00303.pdb # 14: usage_00304.pdb # 15: usage_00305.pdb # 16: usage_00306.pdb # 17: usage_00391.pdb # 18: usage_00471.pdb # 19: usage_00472.pdb # 20: usage_00473.pdb # # Length: 78 # Identity: 66/ 78 ( 84.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 78 ( 85.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 78 ( 2.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00015.pdb 1 -EKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 59 usage_00016.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00032.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00036.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00037.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00042.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00059.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00129.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00142.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00145.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00146.pdb 1 SEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00303.pdb 1 SEKQLAEVVERTVTPLMKAQAIPGMAVAVIYEGQPHYFTFGKADVAANKPVTPQTLFELG 60 usage_00304.pdb 1 -EKQLAEVVERTVTPLMKAQAIPGMAVAVIYEGQPHYFTFGKADVAANKPVTPQTLFELG 59 usage_00305.pdb 1 -EKQLAEVVERTVTPLMKAQAIPGMAVAVIYEGQPHYFTFGKADVAANKPVTPQTLFELG 59 usage_00306.pdb 1 SEKQLAEVVERTVTPLMKAQAIPGMAVAVIYEGQPHYFTFGKADVAANKPVTPQTLFELG 60 usage_00391.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00471.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00472.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 usage_00473.pdb 1 SEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELG 60 EKQLAEVV T TPLMKAQ PGMAVAVIY G PHY TFGKAD AANKPVTPQTLFELG usage_00012.pdb 61 SISKTFTGVLGGDAIAR- 77 usage_00015.pdb 60 SISKTFTGVLGGDAIARG 77 usage_00016.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00032.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00036.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00037.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00042.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00059.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00129.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00142.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00145.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00146.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00303.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00304.pdb 60 SISKTFTGVLGGDAIARG 77 usage_00305.pdb 60 SISKTFTGVLGGDAIARG 77 usage_00306.pdb 61 SISKTFTGVLGGDAIAR- 77 usage_00391.pdb 61 GISKTFTGVLGGDAIARG 78 usage_00471.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00472.pdb 61 SISKTFTGVLGGDAIARG 78 usage_00473.pdb 61 SISKTFTGVLGGDAIARG 78 sISKTFTGVLGGDAIAR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################