################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:54 2021 # Report_file: c_0088_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00009.pdb # 2: usage_00010.pdb # 3: usage_00011.pdb # 4: usage_00014.pdb # 5: usage_00015.pdb # # Length: 190 # Identity: 54/190 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/190 ( 36.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/190 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 DSVTLTMVPSFVHELDA-QIATESWGEIRFDLAYGGVFYALVDVRQLGLTIEPGNARRLV 59 usage_00010.pdb 1 -NASIINVPSFLYQQDVVVVLPKPYGEVRVDIAFGGNFFAIVPAEQLGIDISVQNLSRLQ 59 usage_00011.pdb 1 EKVRLTMVPSFVHELDV-GIDTPQWGRIKLDLCYGGIFYALVDVGQIGLTIGKANAASLV 59 usage_00014.pdb 1 -NASIINVPSFLYQQDVVVVLPKPYGEVRVDIAFGGNFFAIVPAEQLGIDISVQNLSRLQ 59 usage_00015.pdb 1 -NASIINVPSFLYQQDVVVVLPKPYGEVRVDIAFGGNFFAIVPAEQLGIDISVQNLSRLQ 59 VPSF Dv Ge r D a GG F A V QlG I N rL usage_00009.pdb 60 EAGMLLKGEINQRIQVVHPDIPAISGVAYVMFRDEDP-D-GAVRTCTTMWPGRVDRSPCG 117 usage_00010.pdb 60 EAGELLRTEINRSVKVQHPQLPHINTVDCVEIYGPPTNPEANYKNVVIFGNRQADRSPCG 119 usage_00011.pdb 60 QAGMVLKELINRTVPVVHPEIPAISGVAYVMFRDIDA-D-GAIRTCTTMWPGRADRSP-G 116 usage_00014.pdb 60 EAGELLRTEINRSVKVQHPQLPHINTVDCVEIYGPPTNPEANYKNVVIFGNRQADRSPCG 119 usage_00015.pdb 60 EAGELLRTEINRSVKVQHPQLPHINTVDCVEIYGPPTNPEANYKNVVIFGNRQADRSPCG 119 eAG lL eINr v V HP P I V V aDRSP G usage_00009.pdb 118 TGNSANLATLHARGRVKPGDSFLSRSIIGSQFTVGLQGLTTV--A----------GRSAV 165 usage_00010.pdb 120 TGTSAKMATLYAKGQLRIGETFVYESILGSLFQGRVLGEERIPGVKVPVTKDAEEGMLVV 179 usage_00011.pdb 117 TGNSANLATLHARGKARVGDVFKSRSIIGSEFEVGLQAETEV--A----------GKPAI 164 usage_00014.pdb 120 TGTSAKMATLYAKGQLRIGETFVYESILGSLFQGRVLGEERIPGVKVPVTKDAEEGMLVV 179 usage_00015.pdb 120 TGTSAKMATLYAKGQLRIGETFVYESILGSLFQGRVLGEERIPGVKVPVTKDAEEGMLVV 179 TG SA ATL A G r G F SI GS F ge G v usage_00009.pdb 166 IPTITG---- 171 usage_00010.pdb 180 TAEITGKAFI 189 usage_00011.pdb 165 IPTITGRGFT 174 usage_00014.pdb 180 TAEITGKAFI 189 usage_00015.pdb 180 TAEITGKAFI 189 ITG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################