################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:47 2021 # Report_file: c_1023_131.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00060.pdb # 2: usage_00309.pdb # 3: usage_00310.pdb # 4: usage_00792.pdb # 5: usage_00793.pdb # 6: usage_00855.pdb # 7: usage_01132.pdb # 8: usage_01133.pdb # # Length: 64 # Identity: 10/ 64 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 64 ( 23.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 64 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 RRVIVRSLYRF-------KRIKVSEYKQMAGRAGRPGMDERGEAIIIVGK-RDREIAVKR 52 usage_00309.pdb 1 RTVIIGDI-------------PIMEYKQMSGRAGRPGFDQIGESIVVVRDKEDVDRVFKK 47 usage_00310.pdb 1 RTVIIGDI------------IPIMEYKQMSGRAGRPGFDQIGESIVVVRDKEDVDRVFKK 48 usage_00792.pdb 1 FRVIIRDIWRYSD-F-GMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTS-DDPREVMNH 57 usage_00793.pdb 1 FRVIIRDIWRYSD-F-GMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTS-DDPREVMNH 57 usage_00855.pdb 1 HTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQ-SNVQYYLSV 59 usage_01132.pdb 1 HTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSH-GELQYYLSL 59 usage_01133.pdb 1 HLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQG-SKKDFFKKF 59 VIi QM GrAgRP D Ge i usage_00060.pdb 53 YIFG 56 usage_00309.pdb 48 YVLS 51 usage_00310.pdb 49 YVLS 52 usage_00792.pdb 58 YIFG 61 usage_00793.pdb 58 YIFG 61 usage_00855.pdb 60 L--- 60 usage_01132.pdb 60 LN-- 61 usage_01133.pdb 60 LYE- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################