################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:14:56 2021 # Report_file: c_0550_10.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00077.pdb # 2: usage_00138.pdb # 3: usage_00160.pdb # 4: usage_00173.pdb # 5: usage_00228.pdb # 6: usage_00229.pdb # 7: usage_00230.pdb # 8: usage_00231.pdb # 9: usage_00232.pdb # 10: usage_00233.pdb # 11: usage_00234.pdb # 12: usage_00235.pdb # 13: usage_00236.pdb # 14: usage_00237.pdb # 15: usage_00238.pdb # 16: usage_00416.pdb # 17: usage_00425.pdb # 18: usage_00426.pdb # 19: usage_00427.pdb # # Length: 173 # Identity: 6/173 ( 3.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/173 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/173 ( 42.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 ----FAHPLPIKVICELLGVDEAARGAFGRWSSEILVM--D----PE----R-------- 38 usage_00138.pdb 1 LMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00160.pdb 1 --------------------PPQRRAELTTLLAGIAKL--D----------D-------- 20 usage_00173.pdb 1 ------------------------HEQFGDWSGALVDIQMD-----------DPTDPALA 25 usage_00228.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00229.pdb 1 LMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00230.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00231.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00232.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00233.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00234.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00235.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00236.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00237.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00238.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00416.pdb 1 AVSEVAEPFPVEVLSSILGIPDKDRGRFSEWSNLVAGV---LDINFAIPKEV-------- 49 usage_00425.pdb 1 --------------------PAEDRDDFSAWSSVLVDD--S----------P-------- 20 usage_00426.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 usage_00427.pdb 1 LMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVLVDD--S----------P-------- 40 r f ws usage_00077.pdb 39 AEQRGQAAREVVNFILDLVERRRTEPGDDLLSALISV-----QDDDDGRLSADELTSIAL 93 usage_00138.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DEDGD---RLSQEELVAMAM 95 usage_00160.pdb 21 REGAVRAQDDLFGYVAGLVEHKRAEPGPDIISRLNDG-----------ELTEDRVAHLAM 69 usage_00173.pdb 26 E-RIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVD---GR---ALDDEEAANFST 78 usage_00228.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDE--DGD---RLSQEELVAMAM 75 usage_00229.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDE--DGD---RLSQEELVAMAM 95 usage_00230.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 75 usage_00231.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00232.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 75 usage_00233.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00234.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 75 usage_00235.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 75 usage_00236.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00237.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00238.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00416.pdb 50 ADRRSAAIEESIDYFRTLATS-G-NAPEGLVRRLSEV-----SHG-GDQLSVDEIAATCL 101 usage_00425.pdb 21 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 75 usage_00426.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 usage_00427.pdb 41 ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVS--DMDGD---RLSQEELVAMAM 95 a y l r p l s L L e usage_00077.pdb 94 VLLLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSALPNAVEEILR------ 140 usage_00138.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 usage_00160.pdb 70 GLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPDVMARAVEEVLR------ 116 usage_00173.pdb 79 ALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLR------ 125 usage_00228.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00229.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVS 148 usage_00230.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00231.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 usage_00232.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00233.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLIS-------------- 134 usage_00234.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00235.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00236.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 usage_00237.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLIS-------------- 134 usage_00238.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 usage_00416.pdb 102 LITVAGQETTSNTIGNMLITFSRHADQFEQVRANPQFIENAVAEVLR------ 148 usage_00425.pdb 76 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 122 usage_00426.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 usage_00427.pdb 96 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLR------ 142 ll AG gn l Hpdq dP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################