################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:05 2021 # Report_file: c_1025_27.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00112.pdb # 2: usage_00113.pdb # 3: usage_00114.pdb # 4: usage_00115.pdb # 5: usage_00209.pdb # 6: usage_00210.pdb # 7: usage_00211.pdb # 8: usage_00212.pdb # 9: usage_00424.pdb # 10: usage_00439.pdb # 11: usage_00440.pdb # 12: usage_00441.pdb # 13: usage_00596.pdb # # Length: 80 # Identity: 71/ 80 ( 88.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 80 ( 90.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 80 ( 7.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVFDLPDRDCAALASNGEYSIAD 60 usage_00113.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVFDLPDRDCAALASNGEYSIAD 60 usage_00114.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00115.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00209.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRACAALASNGEYSIAD 60 usage_00210.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRACAALASNGEYSIAD 60 usage_00211.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00212.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00424.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00439.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 usage_00440.pdb 1 VPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAA---NGEYSIAD 57 usage_00441.pdb 1 ---FMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAA---NGEYSIAD 54 usage_00596.pdb 1 VPSFLWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIAD 60 FmWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVV DLPDR CAA NGEYSIAD usage_00112.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00113.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00114.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00115.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00209.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00210.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00211.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00212.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00424.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00439.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 usage_00440.pdb 58 GGVAKYKNYIDTIRQIVVEY 77 usage_00441.pdb 55 GGVAKYKNYIDTIRQIVVEY 74 usage_00596.pdb 61 GGVAKYKNYIDTIRQIVVEY 80 GGVAKYKNYIDTIRQIVVEY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################