################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:19 2021 # Report_file: c_1218_79.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00008.pdb # 2: usage_00039.pdb # 3: usage_00119.pdb # 4: usage_00285.pdb # 5: usage_00368.pdb # 6: usage_00426.pdb # 7: usage_00662.pdb # 8: usage_00711.pdb # 9: usage_00910.pdb # # Length: 97 # Identity: 10/ 97 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 97 ( 13.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 51/ 97 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ----ILVSA--S-LVCKIADFGL--ARVG------------------------A------ 21 usage_00039.pdb 1 ----VLVTE--D-NVMKIADFGL------------------------------------- 16 usage_00119.pdb 1 ----ILVGE--N-LVCKVAD---------FG---------------------GA------ 17 usage_00285.pdb 1 ----ILLTH--G-RITKICD---------FGLAR------DIKNDSNYVVKGNA------ 32 usage_00368.pdb 1 ----VLVTE--D-NVMKIADFGL--A--------RDIHHIDY------------YKKTTN 31 usage_00426.pdb 1 ----CLVND--Q-GVVKVSDFGL--S-----RYV-------------------------- 20 usage_00662.pdb 1 ----CLVND--Q-GVVKVSDFGL--S-----RYV------LD-----------S------ 23 usage_00711.pdb 1 ----CLVND--Q-GVVKVSDFGLSR----------------------------------- 18 usage_00910.pdb 1 ILLLEKIEHDICNKTLKITDFG-------------------------------------- 22 l K D usage_00008.pdb 22 -KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT- 56 usage_00039.pdb 17 --LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 51 usage_00119.pdb 18 -KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT- 52 usage_00285.pdb 33 -RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 68 usage_00368.pdb 32 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 68 usage_00426.pdb 21 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 56 usage_00662.pdb 24 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 59 usage_00711.pdb 19 -KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 54 usage_00910.pdb 23 ---AYAWMAPEVIKSSLFSKGSDIWSYGVLLWELLTG 56 p W PE SD W G l E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################