################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:54 2021 # Report_file: c_1417_109.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00610.pdb # 2: usage_00765.pdb # 3: usage_00798.pdb # 4: usage_01050.pdb # # Length: 92 # Identity: 6/ 92 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 92 ( 28.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 92 ( 41.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00610.pdb 1 -SPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMIITIGQSIVYV-MT---- 53 usage_00765.pdb 1 ISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMT-G--- 55 usage_00798.pdb 1 --PIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGA-GAFG 57 usage_01050.pdb 1 ----IGPIVTAGIILQL-------------------QRVFSVFMCFFEAAVWILG-GAFG 36 vt g imqll g Qklf i v v usage_00610.pdb 54 -----C-LLITIQLFVAGLIVLLLDELLQKGY 79 usage_00765.pdb 56 -----ICLLITIQLFVAGLIVLLLDELLQK-- 80 usage_00798.pdb 58 ILTPLLAFLVIIQIAFGSIILIYLDEIVSK-- 87 usage_01050.pdb 37 RV--AIAVLMILQLAMGGIVLIILDELVS--- 63 L iQl g i LDEl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################