################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:03 2021 # Report_file: c_1409_79.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00239.pdb # 2: usage_00463.pdb # 3: usage_00483.pdb # 4: usage_00484.pdb # 5: usage_00485.pdb # 6: usage_00969.pdb # 7: usage_00972.pdb # 8: usage_00973.pdb # 9: usage_00974.pdb # 10: usage_00975.pdb # 11: usage_00976.pdb # 12: usage_00977.pdb # 13: usage_01052.pdb # 14: usage_01053.pdb # 15: usage_01054.pdb # 16: usage_01056.pdb # 17: usage_01057.pdb # 18: usage_01058.pdb # 19: usage_01172.pdb # 20: usage_01173.pdb # 21: usage_01174.pdb # # Length: 53 # Identity: 32/ 53 ( 60.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 53 ( 60.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 53 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00239.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAF--- 47 usage_00463.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 51 usage_00483.pdb 1 --GPLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAF--- 48 usage_00484.pdb 1 ----LAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAF--- 46 usage_00485.pdb 1 ----LAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFVTR 49 usage_00969.pdb 1 --GELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 49 usage_00972.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 48 usage_00973.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 48 usage_00974.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 48 usage_00975.pdb 1 ----LAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFV-- 47 usage_00976.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 50 usage_00977.pdb 1 ---ELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 50 usage_01052.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVT- 52 usage_01053.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 53 usage_01054.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVT- 52 usage_01056.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 53 usage_01057.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 53 usage_01058.pdb 1 VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTR 53 usage_01172.pdb 1 ---PLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAF--- 47 usage_01173.pdb 1 ---PLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFV-- 48 usage_01174.pdb 1 ----LAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFVTR 49 LAKV AVY GL LQI YF LLK GIDPI FI AKDAM TAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################