################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:08 2021 # Report_file: c_1079_70.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00086.pdb # 2: usage_00098.pdb # 3: usage_00117.pdb # 4: usage_00145.pdb # 5: usage_00195.pdb # 6: usage_00513.pdb # 7: usage_00514.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 66 ( 4.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 66 ( 51.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 ---------LEN-----PFEDAKKVICIE-P--------HPDDCAIG-GGTIKKLSDEGV 36 usage_00098.pdb 1 -----VDELK-K----YVTDKTRALIINS-PCNPTGAVLTKK----DLEEIADFVVEHDL 45 usage_00117.pdb 1 ----DNNELE-A----LFNEKTKMIIINT-PHNPLGKVMDRA----ELEVVANLCKKWNV 46 usage_00145.pdb 1 ----KPEDAK-NPQKN----TPKFLYTVPNGNNPTGNSLTSE----RKKEIYELARKYDF 47 usage_00195.pdb 1 AKDH---------------CDPKVLCIIN-PGNPTGQVQSRK----CIEDVIHFAWEEKL 40 usage_00513.pdb 1 ----DYEDIE-N-----KIKDVKLFILCN-PHNPVGRVWTKD----ELKKLGDICLKHNV 45 usage_00514.pdb 1 -----YEDIE-N-----KIKDVKLFILCN-PHNPVGRVWTKD----ELKKLGDICLKHNV 44 k p usage_00086.pdb 37 EVIYIC 42 usage_00098.pdb 46 IVISDE 51 usage_00117.pdb 47 LCVSDE 52 usage_00145.pdb 48 LIIEDD 53 usage_00195.pdb 41 FLLADE 46 usage_00513.pdb 46 KIISDE 51 usage_00514.pdb 45 KIISDE 50 d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################