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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:28 2021
# Report_file: c_0970_90.html
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#====================================
# Aligned_structures: 5
#   1: usage_00042.pdb
#   2: usage_00043.pdb
#   3: usage_00044.pdb
#   4: usage_00045.pdb
#   5: usage_01002.pdb
#
# Length:         66
# Identity:       53/ 66 ( 80.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/ 66 ( 80.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 66 ( 16.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00042.pdb         1  ---GAKTGTA---KHVATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKI-GG   53
usage_00043.pdb         1  FDVGAKTGTARKNKHVATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKI-GG   59
usage_00044.pdb         1  ----AKTGTARKNKHVGTFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGSPFKKIMGG   56
usage_00045.pdb         1  ---GAKTGTARKNKHVGTFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGSPFKKIMGG   57
usage_01002.pdb         1  ---GAKTGTARKNKHVGTFIGFAPAKNPRVIVAVTIDEPTAHG---GVVAGSPFKKIMGG   54
                               AKTGTA   KHV TFIGFAPAKNPRVIVAVTIDEPTAHG   GVVAG PFKKI GG

usage_00042.pdb        54  SLNILG   59
usage_00043.pdb        60  SLNILG   65
usage_00044.pdb        57  SLNILG   62
usage_00045.pdb        58  SLNILG   63
usage_01002.pdb        55  SLNILG   60
                           SLNILG


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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