################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:11 2021 # Report_file: c_1297_17.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00477.pdb # 2: usage_00673.pdb # 3: usage_01439.pdb # 4: usage_01442.pdb # 5: usage_01443.pdb # 6: usage_01444.pdb # 7: usage_01445.pdb # 8: usage_01446.pdb # 9: usage_02000.pdb # 10: usage_02328.pdb # 11: usage_02680.pdb # 12: usage_02699.pdb # 13: usage_02700.pdb # # Length: 54 # Identity: 6/ 54 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 54 ( 20.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 54 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00477.pdb 1 LSVKGRIILEIIEGMAYLHGK--GVIHKDLKPENILVDNDFHIKI-AD------ 45 usage_00673.pdb 1 -QSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVV--------- 44 usage_01439.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-A------- 46 usage_01442.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-A------- 46 usage_01443.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-AD------ 47 usage_01444.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-AD------ 47 usage_01445.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-A------- 46 usage_01446.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-A------- 46 usage_02000.pdb 1 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD------ 48 usage_02328.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-A------- 46 usage_02680.pdb 1 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA----PVCAKV 50 usage_02699.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-AD------ 47 usage_02700.pdb 1 WPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKI-AD------ 47 i G ylh p H DL NI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################