################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:45 2021 # Report_file: c_1445_232.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_04092.pdb # 2: usage_04786.pdb # 3: usage_04787.pdb # 4: usage_04788.pdb # 5: usage_06644.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 61 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/ 61 ( 73.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_04092.pdb 1 --QVT---SNEIKTGEQLTTSHVFS---------G-FGC-------EGGNTSPSLTWSG- 37 usage_04786.pdb 1 DLVIW---DPD--SVKTISAKTHNSSLEY--NI-F-EGME------CRGSPLVVISQ--- 42 usage_04787.pdb 1 DLVIW---DPD--SVKTISAKTHNSSLEY--NI-F-EGME------CRGSPLVVISQ--- 42 usage_04788.pdb 1 DLVIW---DPD--SVKTISAKTHNSSLEY--NI-F-EGME------CRGSPLVVISQ--- 42 usage_06644.pdb 1 -----TTLH--------------------PKEVEQNTVRDFPIPKIRDVRKYPEITI--S 33 g g i usage_04092.pdb - usage_04786.pdb - usage_04787.pdb - usage_04788.pdb - usage_06644.pdb 34 K 34 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################