################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:19 2021 # Report_file: c_1452_488.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00229.pdb # 2: usage_01318.pdb # 3: usage_01319.pdb # 4: usage_01782.pdb # 5: usage_01783.pdb # 6: usage_01874.pdb # 7: usage_02859.pdb # 8: usage_03562.pdb # 9: usage_04410.pdb # # Length: 17 # Identity: 1/ 17 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 17 ( 17.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 17 ( 58.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00229.pdb 1 R--------RFGGMKI- 8 usage_01318.pdb 1 ---VAEIGEGAYGKVFK 14 usage_01319.pdb 1 ---VAEIGEGAYGKVFK 14 usage_01782.pdb 1 ---KRKLGSGAFGDVHL 14 usage_01783.pdb 1 ---KRKLGSGAFGDVHL 14 usage_01874.pdb 1 ---EKKLGAGQFGEVWM 14 usage_02859.pdb 1 ---LKELGTGQFGVVKY 14 usage_03562.pdb 1 -QNLSPVGSGAYGSVCA 16 usage_04410.pdb 1 ----KQIGKGGFGLVHK 13 g G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################