################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:58:42 2021 # Report_file: c_0328_85.html ################################################################################################ #==================================== # Aligned_structures: 2 # 1: usage_00072.pdb # 2: usage_00554.pdb # # Length: 212 # Identity: 187/212 ( 88.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 187/212 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/212 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 ----IWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAAG 56 usage_00554.pdb 1 PIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAAG 60 IWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAAG usage_00072.pdb 57 ILEEGRQLDLQDRFINCKTVKYFLRANNIDKAVEVASLFTKNDDSVNGIKDLHLVEASWF 116 usage_00554.pdb 61 ILEEGRQLDLQDRFINCKTVKYFLRANNIDKAVEVASLF-T-------------VEASWF 106 ILEEGRQLDLQDRFINCKTVKYFLRANNIDKAVEVASLF VEASWF usage_00072.pdb 117 IVEQAEAYYRLYLDRKKKLDDLA-----SQIANDIKENQWLVRKYKGLALKRFNAIPKFY 171 usage_00554.pdb 107 IVEQAEAYYRLYLDRKKKLDDLAESDKSEQIANDIKENQWLVRKYKGLALKRFNAIPKFY 166 IVEQAEAYYRLYLDRKKKLDDLA QIANDIKENQWLVRKYKGLALKRFNAIPKFY usage_00072.pdb 172 KQFEDDQLDFHSYCMRKGTPRAYLEMLEWGKA 203 usage_00554.pdb 167 KQFEDDQLDFHSYCMRKGTPRAYLEMLEWGKA 198 KQFEDDQLDFHSYCMRKGTPRAYLEMLEWGKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################