################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:30 2021 # Report_file: c_1297_248.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00379.pdb # 2: usage_01020.pdb # 3: usage_01120.pdb # 4: usage_01121.pdb # 5: usage_02740.pdb # # Length: 32 # Identity: 1/ 32 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 32 ( 18.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 32 ( 37.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00379.pdb 1 --LRSILDTVP-D---ATVVSATDGTIVSFN- 25 usage_01020.pdb 1 --DPVELFFHIQG---SGRLKTPSGKYIRI-G 26 usage_01120.pdb 1 HPDVFNILLQ---ILDDGRLTDSHGRTVDF-R 28 usage_01121.pdb 1 HPDVFNILLQ---ILDDGRLTDSHGRTVDF-R 28 usage_02740.pdb 1 ----VFNILL---QLDDGRLTDSHGRTVDF-R 24 grl G v f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################