################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:37:03 2021 # Report_file: c_0175_23.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00142.pdb # 2: usage_00143.pdb # 3: usage_00215.pdb # 4: usage_00216.pdb # 5: usage_00217.pdb # 6: usage_00218.pdb # 7: usage_00220.pdb # 8: usage_00221.pdb # 9: usage_00356.pdb # 10: usage_00357.pdb # 11: usage_00358.pdb # 12: usage_00574.pdb # 13: usage_00575.pdb # 14: usage_00576.pdb # 15: usage_00577.pdb # 16: usage_00578.pdb # # Length: 144 # Identity: 95/144 ( 66.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 97/144 ( 67.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/144 ( 15.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00142.pdb 1 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY 60 usage_00143.pdb 1 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY 60 usage_00215.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00216.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00217.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00218.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00220.pdb 1 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 60 usage_00221.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 usage_00356.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00357.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00358.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY 58 usage_00574.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 usage_00575.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 usage_00576.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 usage_00577.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 usage_00578.pdb 1 --QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY 58 QKV LVGDGAVGSSYA AM QGIA E IVD KD TKGDA DL A FT PKKIY usage_00142.pdb 61 SGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 120 usage_00143.pdb 61 SGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 120 usage_00215.pdb 59 SAEYSDAKDADLVVITAGAP-----TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 113 usage_00216.pdb 59 SAEYSDAKDADLVVITAG--------------KNLKILKSIVDPIVDSGFNGIFLVAANP 104 usage_00217.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 usage_00218.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 usage_00220.pdb 61 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 120 usage_00221.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 usage_00356.pdb 59 SAEYSDAKDADLVVITVN--------------KNLKILKSIVDPIVDSGFNGIFLVAANP 104 usage_00357.pdb 59 SAEYSDAKDADLVVITAGAP-----TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 113 usage_00358.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 usage_00574.pdb 59 SAEYSDAKDADLVVITAGAP----------------ILKSIVDPIVDSGFNGIFLVAANP 102 usage_00575.pdb 59 SAEYSDAKDADLVVITAG-A------------KNLKILKSIVDPIVDSGFNGIFLVAANP 105 usage_00576.pdb 59 SAEYSDAKDADLVVITAG--------------KNLKILKSIVDPIVDSGFNGIFLVAANP 104 usage_00577.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 usage_00578.pdb 59 SAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 118 S EYSD KDADLVVITag IL SIV P VDSGF GIFLVAANP usage_00142.pdb 121 VDILTYATWKFSGFPKERVIGS-- 142 usage_00143.pdb 121 VDILTYATWKFSGFPKERVIGS-- 142 usage_00215.pdb 114 VDILTYATWKLSGFPKNRVVGS-- 135 usage_00216.pdb 105 VDILTYATWKLSGFPKNRVVGS-- 126 usage_00217.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 usage_00218.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 usage_00220.pdb 121 VDILTYATWKLSGFPKNRVVGS-- 142 usage_00221.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 usage_00356.pdb 105 VDILTYATWKLSGFPKNRVVGS-- 126 usage_00357.pdb 114 VDILTYATWKLSGFPKNRVVGS-- 135 usage_00358.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 usage_00574.pdb 103 VDILTYATWKLSGFPKNRVVGSGT 126 usage_00575.pdb 106 VDILTYATWKLSGFPKNRVVGS-- 127 usage_00576.pdb 105 VDILTYATWKLSGFPKNRVVGS-- 126 usage_00577.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 usage_00578.pdb 119 VDILTYATWKLSGFPKNRVVGS-- 140 VDILTYATWK SGFPK RV GS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################