################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:14:30 2021 # Report_file: c_0675_54.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00015.pdb # 2: usage_00063.pdb # 3: usage_00098.pdb # 4: usage_00100.pdb # 5: usage_00107.pdb # 6: usage_00126.pdb # 7: usage_00153.pdb # 8: usage_00220.pdb # 9: usage_00590.pdb # 10: usage_00796.pdb # 11: usage_00830.pdb # 12: usage_00913.pdb # 13: usage_00920.pdb # 14: usage_00921.pdb # # Length: 46 # Identity: 21/ 46 ( 45.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 46 ( 54.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 46 ( 8.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLI 44 usage_00063.pdb 1 GGIITQTPKFLIGQEGQKLTLKCQQNFNHDTMYWYRQDSGKGLRL- 45 usage_00098.pdb 1 --GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLI 44 usage_00100.pdb 1 --GVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLI 44 usage_00107.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI 44 usage_00126.pdb 1 -AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI 45 usage_00153.pdb 1 ---VTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLI 43 usage_00220.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI 44 usage_00590.pdb 1 ---VTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI 43 usage_00796.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLI 44 usage_00830.pdb 1 --AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI 44 usage_00913.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLI 44 usage_00920.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLI 44 usage_00921.pdb 1 --AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLI 44 vTQ P v tG TL C Q nH MYWYRQD G GLRL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################