################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:54 2021 # Report_file: c_0856_43.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00109.pdb # 4: usage_00192.pdb # 5: usage_00259.pdb # 6: usage_00308.pdb # 7: usage_00383.pdb # 8: usage_00422.pdb # 9: usage_00423.pdb # # Length: 79 # Identity: 3/ 79 ( 3.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 79 ( 7.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 79 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLK-KLQ-EKEEY-DVVADVRG-GL-IGIQF 55 usage_00015.pdb 1 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLK-KLQ-EKEEY-DVVADVRG-GL-IGIQF 55 usage_00109.pdb 1 -PLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEY-DVVADVRGMGLMIGIQF 58 usage_00192.pdb 1 -PLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI--PS-PKIREVRGMGLMVGLEL 56 usage_00259.pdb 1 -NLASVVALSALREILAQDLVGHAERMGAYFKQALSEIAARY-PFVSEVRGRGLMLGIQF 58 usage_00308.pdb 1 -PLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEF-DFCKKRKGLGF-QGLSL 57 usage_00383.pdb 1 -ALACAIGSKVIDIVK--DLLPHVNEIGKIFAEELQG---L----ADDVRGIGLAWGLEY 50 usage_00422.pdb 1 -PLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 59 usage_00423.pdb 1 -PLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 59 La g rG G usage_00014.pdb 56 RE-EVSNREVATKCFENK- 72 usage_00015.pdb 56 RE-EVSNREVATKCFENK- 72 usage_00109.pdb 59 RE-EVSNREVATKCFENK- 75 usage_00192.pdb 57 KE---KAAPYIARLEKEHR 72 usage_00259.pdb 59 DQ-A-------HTTWKFL- 68 usage_00308.pdb 58 DK-SVKVAKVIQKCQENA- 74 usage_00383.pdb 51 NEKK-VRDRIIGESFKRG- 67 usage_00422.pdb 60 VDNE-IGYNFASEMFRQR- 76 usage_00423.pdb 60 VDNE-IGYNFASEMFRQR- 76 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################