################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:10:40 2021 # Report_file: c_1460_147.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00075.pdb # 2: usage_00242.pdb # 3: usage_00243.pdb # 4: usage_00244.pdb # 5: usage_00341.pdb # 6: usage_00342.pdb # 7: usage_00343.pdb # 8: usage_00355.pdb # 9: usage_00356.pdb # 10: usage_00357.pdb # 11: usage_00358.pdb # 12: usage_00706.pdb # 13: usage_00708.pdb # 14: usage_00773.pdb # 15: usage_00774.pdb # 16: usage_01132.pdb # 17: usage_01402.pdb # 18: usage_01403.pdb # 19: usage_01451.pdb # 20: usage_01469.pdb # 21: usage_01682.pdb # 22: usage_01719.pdb # 23: usage_01814.pdb # 24: usage_01865.pdb # 25: usage_01866.pdb # 26: usage_01867.pdb # 27: usage_01868.pdb # 28: usage_01869.pdb # 29: usage_01870.pdb # 30: usage_02258.pdb # # Length: 33 # Identity: 2/ 33 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 33 ( 30.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 33 ( 60.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00075.pdb 1 PPVYPVTVPFLGHIVQFGKN------------- 20 usage_00242.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00243.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_00244.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00341.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00342.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_00343.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00355.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_00356.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00357.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_00358.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00706.pdb 1 PPVYPVTVPFLGHIVQFGKN------------- 20 usage_00708.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_00773.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_00774.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01132.pdb 1 PPVYPVTVPFLGHIVQFGKN------------- 20 usage_01402.pdb 1 PPMYPVTVPILGHIIQFGKS------------- 20 usage_01403.pdb 1 -PMYPVTVPILGHIIQFGKS------------- 19 usage_01451.pdb 1 -PVYPVTVPFLGHIVQFGKN------------- 19 usage_01469.pdb 1 PPVYPVTVPFLGHIVQFGKN------------- 20 usage_01682.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01719.pdb 1 PPVYPVTVPFLGHIVQFGK-------------- 19 usage_01814.pdb 1 --PSPLPV-LGNLLQM----------------- 13 usage_01865.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01866.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01867.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01868.pdb 1 -PVYPVTVPILGHIIQFGKS------------- 19 usage_01869.pdb 1 -PVYPVTVPILGHIIQFGKSPLGFMQECKRQLK 32 usage_01870.pdb 1 PPVYPVTVPILGHIIQFGKS------------- 20 usage_02258.pdb 1 PPVYPVTVPFLGHIVQFGKN------------- 20 yPvtV lghi q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################