################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:13:14 2021 # Report_file: c_0145_10.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00017.pdb # 2: usage_00037.pdb # 3: usage_00054.pdb # 4: usage_00074.pdb # 5: usage_00091.pdb # 6: usage_00172.pdb # 7: usage_00184.pdb # 8: usage_00235.pdb # 9: usage_00245.pdb # 10: usage_00283.pdb # 11: usage_00290.pdb # 12: usage_00409.pdb # 13: usage_00450.pdb # 14: usage_00461.pdb # 15: usage_00462.pdb # 16: usage_00473.pdb # 17: usage_00474.pdb # 18: usage_00475.pdb # 19: usage_00581.pdb # # Length: 148 # Identity: 18/148 ( 12.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/148 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/148 ( 27.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 -QLVQSGAEVRKPGASVKVSCKASGYTFT---DNYIHWVRQAPGQGLEWMGWIHPNSGAT 56 usage_00037.pdb 1 VQLVQSGAEMKKPGASVKVSCKASGYTFI---GYHLHWVRQAPGQGLEWMGWINPNSGET 57 usage_00054.pdb 1 --LVESGSAMRKPGSSVKISCRASGFNFR---EYSIHWVRLIPGRGLEWMGWIKGMWGAV 55 usage_00074.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFT---GNYMHWVRQAPGQGLEYMGWINPKSGDT 57 usage_00091.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFT---DYYMHWVRQAPGQGLEWMGETNPRNGGT 57 usage_00172.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFR---SSYISWVRQAPGQGLEWMGWIYAGTGSP 57 usage_00184.pdb 1 VQLVQSGAAVRKPGASVTVSCKFA-E-DDDAPEHFIHFLRQAPGQQLEWLAWMNPTNGAV 58 usage_00235.pdb 1 VQLVQSGAEVKKPGATVKISCKVYGYIFT---DYNIYWVRQAPGKGLEWMGLIDPDNGET 57 usage_00245.pdb 1 VQLMQSGAQLRDPGDSLKISCKASGYNFI---DYHIHWVRLAPGRGLEWMGWIDPVGGIT 57 usage_00283.pdb 1 VQLVQSGAEMKDPGASVKVSCRASGYKFT---DYYMHWVRQAPGQGLEWVGWVNTNGGFT 57 usage_00290.pdb 1 VQLVQSGAEVKKPGATVKISCKASGYTFS---DFYMYWVRQAPGKGLEWMGLIDPEDADT 57 usage_00409.pdb 1 GQLVQSGAELKKPGASVKISCKTSGYRFN---FYHINWIRQTAGRGPEWMGWISPYSGDK 57 usage_00450.pdb 1 EVLVQSGAEVKKPGASVKVSCRAFGYTFT---GNALHWVRQAPGQGLEWLGWINPHSGDT 57 usage_00461.pdb 1 VQLVQSGAEVRKPGASVTVSCKTSGYTFV---NFYIVWVRQAPGQGLEWMGVINPFRGDT 57 usage_00462.pdb 1 VQLVQSGAEVRKPGASVTVSCKTSGYTFV---NFYIVWVRQAPGQGLEWMGVINPFRGDT 57 usage_00473.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFT---GYYMHWVRQAPGQGLEWMGWINPNSGGT 57 usage_00474.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFT---GYYMHWVRQAPGQGLEWMGWINPNSGGT 57 usage_00475.pdb 1 VQLVQSGAEVKKPGASVKVSCKASGYTFT---GYYMHWVRQAPGQGLEWMGWINPNSGGT 57 usage_00581.pdb 1 VQLVQSGTEVKKPGASVKVSCKASGYTFT---GYYMHWVRQAPGQGLEWMGWINPNGGDT 57 LvqSG PG v SC f w R pG glEw g g usage_00017.pdb 57 KYAQKFEGWVTMTRDT-------S---I-STVYMELSRSRSDDTAVYYCARAGL-E-PRS 103 usage_00037.pdb 58 NYAQKFQDWVTMTRDT-------S---I-NTAYMELR-LRSDDTAVYYCARGGM-T-M-- 101 usage_00054.pdb 56 NYARQLQGRVSMTRQL-------SDDPDWGVAYLDFSGLTSGDTGEYFCVRKGPSCPH-C 107 usage_00074.pdb 58 NYAQKFQGRVTMTRDT-------S---I-STVYMEVRRLRSDDTAVYYCATG-W------ 99 usage_00091.pdb 58 TYNEKFKGKATMTRDT-------S---T-STAYMELSSLRSEDTAVYYCTIGTS---G-- 101 usage_00172.pdb 58 SYNQKLQGRVTMTTDT-------S---T-STAYMELRSLRSDDTAVYYCARHRD---Y-- 101 usage_00184.pdb 59 NYAWYLNGRVTATRDR-------S---M-TTAFLEVKSLRSDDTAVYYCARAQKRG-R-- 104 usage_00235.pdb 58 FYAEKFQGRATMTADT-------S---S-DRAYMELSSLRFEDTAVYYCATVMG-K-W-- 102 usage_00245.pdb 58 KYAGQFQGRLSLTRDT-------S---T-NTLFLELSRLTAGDTAVYFCARSMR-P-VDH 104 usage_00283.pdb 58 KYGAKFQGRVTVTRDT-------S---T-NTVFLELSRLTFGDTAMYFCARPMR-P-VSH 104 usage_00290.pdb 58 MYAEKFRGRVTITADT-------S---T-DTGYLELSSLRSEDTAVYYCAADPW---E-- 101 usage_00409.pdb 58 NLAPAFQDRVIMTTDTEVPVTSFT---STGAAYMEIRNLKFDDTGTYFCAKGLLRD-G-S 112 usage_00450.pdb 58 TTSQKFQGRVYMTRDK-------S---I-NTAFLDVTRLTSDDTGIYYCARDKYYG-N-- 103 usage_00461.pdb 58 YFAQKFKGRVTLTRDT-------S---T-STVFMELSSLRSDDTAIYYCARDLE-M-RDG 104 usage_00462.pdb 58 YFAQKFKGRVTLTRDT-------S---T-STVFMELSSLRSDDTAIYYCARDLE-M-RDG 104 usage_00473.pdb 58 NYAQKFQGRVTMTRDT-------S---I-STAYMELSRLRSDDTAVYYCARRGSCD-Y-C 104 usage_00474.pdb 58 NYAQKFQGRVTMTRDT-------S---I-STAYMELSRLRSDDTAVYYCARRGSCD-Y-C 104 usage_00475.pdb 58 NYAQKFQGRVTMTRDT-------S---I-STAYMELSRLRSDDTAVYYCARRGSCD-Y-C 104 usage_00581.pdb 58 NYAQKFQGRVTMTRDT-------S---I-STAYMELSSLRSEDMAVYYCAREYS---S-- 101 T d s l Dt Y C usage_00017.pdb 104 VD---YYF--YGLDVWGQGTAVTVS--- 123 usage_00037.pdb 102 -----V-R--GVMMDWGQGTLVTVS--- 118 usage_00054.pdb 108 -----G-D--FHWQHWGQGTLVVVS--- 124 usage_00074.pdb 100 ----------WGMDVWGQGTLVTV---- 113 usage_00091.pdb 102 -------Y--DYFDYWGQGTLVTVS--- 117 usage_00172.pdb 102 -----Y-S--NSLTYWGQGTLVTVS--- 118 usage_00184.pdb 105 -----S-E--WAYAHWGQGTPVVVS--- 121 usage_00235.pdb 103 -----I-K--GGYDYWGRGTLVTVS--- 119 usage_00245.pdb 105 GIDYSG-L--FVFHFWGRGSDVLVS--- 126 usage_00283.pdb 105 GIDYSG-L--FVFQFWGRGTMVTVSSAS 129 usage_00290.pdb 102 -------L--NAFNVWGQGTLVSVS--- 117 usage_00409.pdb 113 -----S-T--WLPYLWGQGTLLTVS--- 129 usage_00450.pdb 104 -----E-A--VGMDVWGQGTSVTVS--- 120 usage_00461.pdb 105 -----N-NHGSHLEFWGQGTLVTVS--- 123 usage_00462.pdb 105 -----N-NHGSHLEFWGQGTLVTVS--- 123 usage_00473.pdb 105 -----G-D--FPWQYWGQGTVVVVS--- 121 usage_00474.pdb 105 -----G-D--FPWQYWGQGTVVVVS--- 121 usage_00475.pdb 105 -----G-D--FPWQYWGQGTVVVVS--- 121 usage_00581.pdb 102 -------G--WYFAYWGQGTLVTVS--- 117 WG Gt v V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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