################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:08 2021 # Report_file: c_0592_97.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00116.pdb # 2: usage_00117.pdb # 3: usage_00453.pdb # 4: usage_00454.pdb # # Length: 74 # Identity: 21/ 74 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 74 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 74 ( 23.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 -QLYYLGPKGTFSYLACR---QYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSI 56 usage_00117.pdb 1 -QLYYLGPKGTFSYLACR---QYFS---ATFQPKSNLFEVIKAVADT-S-IGVVPIENSI 51 usage_00453.pdb 1 VTYTFLGPQGTFTEAALQVPG----AADATRIPCTNVNTALERVRAG-EADAAVPIENSV 55 usage_00454.pdb 1 VTYTFLGPQGTFTEAALQVPG----AADATRIPCTNVNTALERVRAG-EADAAVPIENSV 55 LGP GTF A AT P N V VPIENS usage_00116.pdb 57 EGTINIVADALAQQ 70 usage_00117.pdb 52 ---INIVADALAQQ 62 usage_00453.pdb 56 EGGVTATLDAIAT- 68 usage_00454.pdb 56 EGGVTATLDAIATG 69 DA A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################