################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:54:48 2021 # Report_file: c_0147_13.html ################################################################################################ #==================================== # Aligned_structures: 42 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00025.pdb # 5: usage_00033.pdb # 6: usage_00035.pdb # 7: usage_00036.pdb # 8: usage_00037.pdb # 9: usage_00053.pdb # 10: usage_00059.pdb # 11: usage_00064.pdb # 12: usage_00103.pdb # 13: usage_00123.pdb # 14: usage_00183.pdb # 15: usage_00185.pdb # 16: usage_00218.pdb # 17: usage_00304.pdb # 18: usage_00305.pdb # 19: usage_00314.pdb # 20: usage_00330.pdb # 21: usage_00342.pdb # 22: usage_00343.pdb # 23: usage_00344.pdb # 24: usage_00363.pdb # 25: usage_00367.pdb # 26: usage_00407.pdb # 27: usage_00411.pdb # 28: usage_00412.pdb # 29: usage_00452.pdb # 30: usage_00496.pdb # 31: usage_00566.pdb # 32: usage_00567.pdb # 33: usage_00617.pdb # 34: usage_00645.pdb # 35: usage_00654.pdb # 36: usage_00660.pdb # 37: usage_00661.pdb # 38: usage_00663.pdb # 39: usage_00673.pdb # 40: usage_00698.pdb # 41: usage_00732.pdb # 42: usage_00733.pdb # # Length: 125 # Identity: 18/125 ( 14.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/125 ( 24.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/125 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00019.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00020.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00025.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00033.pdb 1 -VQLQQSGSELVRPGASVKLSCKASGYTFTTYWIHWVKQRPGQGLEWIGTIYPGSDNTYY 59 usage_00035.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00036.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSY 59 usage_00037.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSY 59 usage_00053.pdb 1 -VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKY 59 usage_00059.pdb 1 -VQLLESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGMIDPNSGGTKY 59 usage_00064.pdb 1 -VQLLEPGTELVKPGASVKLSCRASGYSFTSYWMHWVKQRPGQGLEWIGLIDPSNGRTNF 59 usage_00103.pdb 1 -VHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRY 59 usage_00123.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTLTTYWMNWFKQRPDQGLEWIGRIDPYDSETHY 59 usage_00183.pdb 1 -VQLQQPGAELVQPGTSVRLSCKASGYIFTTYWIHWVKQRPGQGLEWIGEINPNNGRINY 59 usage_00185.pdb 1 QVQLQQPGAELVQPGTSVRLSCKASGYIFTTYWIHWVKQRPGQGLEWIGEINPNNGRINY 60 usage_00218.pdb 1 -VQLQQPGTELVKPGASVKLSCKASGYTFTGFWIHWVKQRPGQGLEWIGHINPGNGGTNY 59 usage_00304.pdb 1 -VHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRY 59 usage_00305.pdb 1 -VQLQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHY 59 usage_00314.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTAY 59 usage_00330.pdb 1 -VKLLESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKY 59 usage_00342.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKLRPGQGFEWIGDINPNNGGPSY 59 usage_00343.pdb 1 -VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKLRPGQGFEWIGDINPNNGGPSY 59 usage_00344.pdb 1 -VQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGLIDPSDSETHY 59 usage_00363.pdb 1 -VQLQQSGPELVKPGTSVRISCEASGYTFTSYYIHWVKQRPGQGLEWIGCIYPGNVNTNY 59 usage_00367.pdb 1 -VQFQQSGAELVKPGASVKLSCKASGYTFTSYLMHWIKQRPGRGLEWIGRIDPNNVVTKF 59 usage_00407.pdb 1 -VQLQQPGAELLRPGASVKLSCKASGYTFTNFWMNWVKQRPGQGLELIGMIDPSDSETHY 59 usage_00411.pdb 1 -VQLLESGAELVKPGAPVRLSCKASGYTFTNYWMNWVKQRPGRGLEWIGRIDPSDSETHY 59 usage_00412.pdb 1 -VQLLESGAELVKPGAPVRLSCKASGYTFTNYWMNWVKQRPGRGLEWIGRIDPSDSETHY 59 usage_00452.pdb 1 -VQLQQSGPELVKPGALVKISCKASGYTFTNYDINWVKQRPGQGLEWIGWIYPGDGSTMY 59 usage_00496.pdb 1 -VQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKY 59 usage_00566.pdb 1 -VQLQQPGAELVQPGTSVRLSCKASGYIFTTYWIHWVKQRPGQGLEWIGEINPNNGRINY 59 usage_00567.pdb 1 -VQLQQPGAELVQPGTSVRLSCKASGYIFTTYWIHWVKQRPGQGLEWIGEINPNNGRINY 59 usage_00617.pdb 1 -VQLLESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY 59 usage_00645.pdb 1 -VKLQESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKY 59 usage_00654.pdb 1 -VQLQQPGSVLVRPGASVKLSCKASGFTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTHY 59 usage_00660.pdb 1 QVQLQQPGAELVKPGTSVKLSCKGYGYTFTSYWMHWVKQRPGQGLEWIGEIDPSESNTNY 60 usage_00661.pdb 1 QVQLQQPGAELVKPGTSVKLSCKGYGYTFTSYWMHWVKQRPGQGLEWIGEIDPSESNTNY 60 usage_00663.pdb 1 -VKLEESGAELVRPGASVTLSCAASGYTFTDFEIHWVKQPPVGGLEWIGTLDPETGGTAY 59 usage_00673.pdb 1 -VHLQQSGTELVAPGGGVKLSCGASGYTFTNYDMNWVRQRPGAGLEWIGWIFPGDGSARG 59 usage_00698.pdb 1 -VHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRY 59 usage_00732.pdb 1 -VKLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDDTNY 59 usage_00733.pdb 1 -VKLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDDTNY 59 V l V SC Gy fT W P G EwIG i P usage_00018.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---SS--YFDYWGQGT 113 usage_00019.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---SS--YFDYWGQGT 113 usage_00020.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---SS--YFDYWGQGT 113 usage_00025.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---SS--YFDYWGQGT 113 usage_00033.pdb 60 DEKFKNKATLTVDTSSSTAFMQLSSLTSEDSA-VYFCTRGSLYYNN-YG--WFGYWGQGT 115 usage_00035.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---SS--YFDYWGQGT 113 usage_00036.pdb 60 NQKFKGKATLTADKSSSTAYMQLSSLTSEDSA-VYYCARSTYYG---GD-WYFNVWGAGT 114 usage_00037.pdb 60 NQKFKGKATLTADKSSSTAYMQLSSLTSEDSA-VYYCARSTYYG---GD-WYFNVWGAGT 114 usage_00053.pdb 60 NLKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCARMWYYG---TY--YFDYWGQGT 113 usage_00059.pdb 60 NEKFKSKATLTVDKPSNTAYMQLSSLTSEDSA-VYYCTRR-----------DMDYWGAGT 107 usage_00064.pdb 60 NDKFKSRATLTVDTSSSTAYMQLSSLTSEDSA-VYYCVRI-------------AYWGQGT 105 usage_00103.pdb 60 NEKFKGKATLTTDKSSSTAYQLNRLTS-EDSA-VYFCARRGFHG---SY--SFAYWGQGT 112 usage_00123.pdb 60 NQKFKDKAILTVDRSSSTAYMQLSSLTSEDSA-VYYCTRFLQITTI-IY--GMDYWGQGT 115 usage_00183.pdb 60 NEKFKTKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCTRVGVMI---TT---FPYWGQGT 112 usage_00185.pdb 61 NEKFKTKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCTRVGVMI---TT---FPYWGQGT 113 usage_00218.pdb 60 NEKFKRMATLTVDKSSSTAYMQLSSLTSEDSA-VYYCARSYSNY---VR--AMDYWGQGT 113 usage_00304.pdb 60 NEKFKGKATLTTDKSSSTAYQLNRLTS-EDSA-VYFCARRGFHG---SY--SFAYWGQGT 112 usage_00305.pdb 60 NQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSA-VYYCGRLGY-----VY--GFDYWGQGT 111 usage_00314.pdb 60 NEKFKSKATLQVDKPSSTAYMQLSSLTSEDSA-VYYCARYDYYG---GS--YFDYWGQGT 113 usage_00330.pdb 60 NEKFKGKATLTSDKSSSTAYMELSSLTSEDSA-VYYCVRGGYRP---YY--AMDYWGQGT 113 usage_00342.pdb 60 NEKFKRKATLTVDTSSSTAYMQLSSLTSEDSA-VYYCTIDDG------Y--RFGYWGQGT 110 usage_00343.pdb 60 NEKFKRKATLTVDTSSSTAYMQLSSLTSEDSA-VYYCTIDDG------Y--RFGYWGQGT 110 usage_00344.pdb 60 NQMFKDKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCARG------------GTYWGQGT 106 usage_00363.pdb 60 NEKFKDKATLIVDTSSNTAYMQLSRMTSEDSA-VYFCTRSHYGL---DW--NFDVWGAGT 113 usage_00367.pdb 60 NEKFKSKATLTVDKPSSTAYMELSSLTSEDSA-VYYCARYAY-----CR--PMDYWGQGT 111 usage_00407.pdb 60 NQMFKDKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCARRDYYG---IL---FDYWGQGT 112 usage_00411.pdb 60 NQNFKDKATLTVDKSSSTAYIQLSSLTSEDSA-VYYCARS-------------GYWGQGT 105 usage_00412.pdb 60 NQNFKDKATLTVDKSSSTAYIQLSSLTSEDSA-VYYCARS-------------GYWGQGT 105 usage_00452.pdb 60 NE-KFKGKATLTADKSSSTAYMQLSSLTSENSSVYFCARLDGNY---GG--WFAYWGQGT 113 usage_00496.pdb 60 NEKFKGKATLTSDKSSSTAYMELSSLTSEDSA-VYYCARGAYKR---GY--AMDYWGQGT 113 usage_00566.pdb 60 NEKFKTKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCTRVGVMI---TT---FPYWGQGT 112 usage_00567.pdb 60 NEKFKTKATLTVDKSSSTAYMQLSSLTSEDSA-VYYCTRVGVMI---TT---FPYWGQGT 112 usage_00617.pdb 60 NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSA-VYYCTRR-----------DSDYWGAGT 107 usage_00645.pdb 60 NEKFKGKATLTSDKSSSTAYMELSSLTSEDSA-VYYCAPY------------GGYWGQGT 106 usage_00654.pdb 60 NEKFKGKATLTVDTSSSTAYVDLSSLTSEDSA-VYYCARMRYGD---YY--AMDNWGQGT 113 usage_00660.pdb 61 NQKFKGKATLTVDISSSTAYMQLSSLTSEDSA-VYYCARGGYDG---WD-YAIDYWGQ-- 113 usage_00661.pdb 61 NQKFKGKATLTVDISSSTAYMQLSSLTSEDSA-VYYCARGGYDG---WD-YAIDYWGQ-- 113 usage_00663.pdb 60 NQNFKGRATLTADKSSSTAYMELRSLTSEDSA-VYYCTRWGKKFYYYGTSYAMDYWGQGT 118 usage_00673.pdb 60 NEKFGGAAALAAAAAGGTAYMGLGGLSSEDSG-VYFCARRGFAG---AA--SFAYWGQGT 113 usage_00698.pdb 60 NEKFKGKATLTTDKSSSTAYQLNRLTS-EDSA-VYFCARRGFHG---SY--SFAYWGQGT 112 usage_00732.pdb 60 NEKFKGKATLTSDKSSSTAYMELSSLTSEDSA-VYYCAREDYYG---SR---WGYWGQGT 112 usage_00733.pdb 60 NEKFKGKATLTSDKSSSTAYMELSSLTSEDSA-VYYCAREDYYG---SR---WGYWGQGT 112 n f l s t eds VY C WG usage_00018.pdb 114 TVTV- 117 usage_00019.pdb 114 TVTV- 117 usage_00020.pdb 114 TVTVS 118 usage_00025.pdb 114 TLTVS 118 usage_00033.pdb 116 LVTVS 120 usage_00035.pdb 114 TVTVS 118 usage_00036.pdb 115 TVTVS 119 usage_00037.pdb 115 TVTV- 118 usage_00053.pdb 114 TLTVS 118 usage_00059.pdb 108 TVTVS 112 usage_00064.pdb 106 LVTVS 110 usage_00103.pdb 113 LVTVS 117 usage_00123.pdb 116 SVTVS 120 usage_00183.pdb 113 LVTVS 117 usage_00185.pdb 114 LVTVS 118 usage_00218.pdb 114 SVTVS 118 usage_00304.pdb 113 LVTVS 117 usage_00305.pdb 112 TLTVS 116 usage_00314.pdb 114 TLTVS 118 usage_00330.pdb 114 SVTVS 118 usage_00342.pdb 111 LVTVS 115 usage_00343.pdb 111 LVTVS 115 usage_00344.pdb 107 TLTVS 111 usage_00363.pdb 114 TVTVS 118 usage_00367.pdb 112 TVTVS 116 usage_00407.pdb 113 TVTVS 117 usage_00411.pdb 106 TLTVS 110 usage_00412.pdb 106 TLTVS 110 usage_00452.pdb 114 SVTVS 118 usage_00496.pdb 114 SVTV- 117 usage_00566.pdb 113 LVTVS 117 usage_00567.pdb 113 LVTVS 117 usage_00617.pdb 108 TVTVS 112 usage_00645.pdb 107 TVTVS 111 usage_00654.pdb 114 SVTVS 118 usage_00660.pdb ----- usage_00661.pdb ----- usage_00663.pdb 119 SVTVS 123 usage_00673.pdb 114 LVTA- 117 usage_00698.pdb 113 LVTVS 117 usage_00732.pdb 113 TLTVS 117 usage_00733.pdb 113 TLTVS 117 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################