################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:14 2021 # Report_file: c_1415_48.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00085.pdb # 2: usage_00250.pdb # 3: usage_00251.pdb # 4: usage_00252.pdb # 5: usage_00253.pdb # 6: usage_00254.pdb # 7: usage_00383.pdb # 8: usage_01308.pdb # 9: usage_01309.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 60 ( 3.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 46/ 60 ( 76.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 PNF-----------------------VRTFL---TTYR-SFCKPQELLSLIIERFE---- 29 usage_00250.pdb 1 ---RQTLY-QLDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 44 usage_00251.pdb 1 -----TLY-QLDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 42 usage_00252.pdb 1 ------LY-QLDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 41 usage_00253.pdb 1 -----TLY-QLDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 42 usage_00254.pdb 1 -----TLY-QLDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 42 usage_00383.pdb 1 -----DKH-HCLDLVGIFIELER-YYFGDKAASEQDLANYL-------SHQ---VFSEHS 43 usage_01308.pdb 1 -----TLYQLMDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 43 usage_01309.pdb 1 -----TLYQLMDGLNTFYQQSLQQPVATSAR---QYLEKRGLSHEVIARFA--------- 43 q l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################