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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:35:26 2021
# Report_file: c_0216_2.html
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#====================================
# Aligned_structures: 7
#   1: usage_00033.pdb
#   2: usage_00038.pdb
#   3: usage_00040.pdb
#   4: usage_00041.pdb
#   5: usage_00042.pdb
#   6: usage_00061.pdb
#   7: usage_00066.pdb
#
# Length:        165
# Identity:       34/165 ( 20.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     62/165 ( 37.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           40/165 ( 24.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00033.pdb         1  -KEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWG-RT   58
usage_00038.pdb         1  EKQFPHPKYDDRLVLNDIMLLKLKEKANLTLGVGTLPISAKSNSIPPGRVCRAVGWG-RT   59
usage_00040.pdb         1  -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG---   56
usage_00041.pdb         1  -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-I-   57
usage_00042.pdb         1  -RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGI--   57
usage_00061.pdb         1  LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-IV   59
usage_00066.pdb         1  LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWG-IV   59
                               PhP   p t   Dl LLqL EKA l   V  Lp      dv PGt C vaGWG   

usage_00033.pdb        59  HNSASWSDTLREVNITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL  118
usage_00038.pdb        60  NVNEPPSDTLQEVKMRILDPQACKH---F-E-DFHQEPQLCVGNPKKIRNVYKGDSGGPL  114
usage_00040.pdb        57  ------PDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N------GDSGGPL  100
usage_00041.pdb        58  -------DSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N-------DSGGPL   99
usage_00042.pdb        58  ------PDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-N-------DSGGPL  100
usage_00061.pdb        60  NHAGRRPDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-NRRDSCKGDSGGPL  115
usage_00066.pdb        60  NHAGRRPDSLQHVLLPVLDRATCNRRTHHDG--AITERLMCAE-S-NRRDSCKGDSGGPL  115
                                  D Lq V    lDr  Cn          i e   Ca            DSGgPL

usage_00033.pdb       119  LCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKGA  163
usage_00038.pdb       115  LCAGIAQGIASY-VLRNA---KPPSVFTRIS-HYRPWINKILREN  154
usage_00040.pdb       101  VCGGVLEGVVTS-G-----K--KPGIYTRVA-SYAAWIDSVLA--  134
usage_00041.pdb       100  VCGGVLEGVVTS-------K--KPGIYTRVA-SYAAWIDSVL---  131
usage_00042.pdb       101  VCGGVLEGVVTS-G--------KPGIYTRVA-SYAAWIDSVLA--  133
usage_00061.pdb       116  VCGGVLEGVVTS-GSAVCGNRKKPGIYTRVA-SYAAWIDSVLA--  156
usage_00066.pdb       116  VCGGVLEGVVTS-GSRVCGNRKKPGIYTRVA-SYAAWIDSVLA--  156
                            C Gv  Gv              Pg ytr    y  WI   l   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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