################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:17 2021 # Report_file: c_1111_4.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00087.pdb # 2: usage_00088.pdb # 3: usage_00089.pdb # 4: usage_00232.pdb # 5: usage_00452.pdb # 6: usage_00570.pdb # # Length: 151 # Identity: 77/151 ( 51.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 139/151 ( 92.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/151 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 YSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALP 60 usage_00088.pdb 1 YSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALP 60 usage_00089.pdb 1 YSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALP 60 usage_00232.pdb 1 YSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALP 60 usage_00452.pdb 1 --VDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLP 58 usage_00570.pdb 1 YSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALP 60 tDLaIFavHLsGaSSILGAINmITTflNMraPgMtmhkvPLFaWSifvTAwLiLLaLP usage_00087.pdb 61 VLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIAT 120 usage_00088.pdb 61 VLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIAT 120 usage_00089.pdb 61 VLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIAT 120 usage_00232.pdb 61 VLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIAT 120 usage_00452.pdb 59 VLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTY 118 usage_00570.pdb 61 VLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIAT 120 VLAgaITMLLTDRNfgTTFFqPsGGGDPvLYQHilWFFGHPEVYIivLPaFGivSHviat usage_00087.pdb 121 FAKKPIFGYLPMVYAMVAIGV---------- 141 usage_00088.pdb 121 FAKKPIFGYLPMVYAMVAIGV---------- 141 usage_00089.pdb 121 FAKKPIFGYLPMVYAMVAIGV---------- 141 usage_00232.pdb 121 FAKKPIFGYLPMVYAMVAIGVLGFVVWAHHM 151 usage_00452.pdb 119 YSGKKEPFGYMGMVWAMMSIGF--------- 140 usage_00570.pdb 121 FAKKPIFGYLPMVYAMVAIGV---------- 141 fakKpifgylpmvyamvaigv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################