################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:35 2021 # Report_file: c_0756_27.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00055.pdb # 2: usage_00056.pdb # 3: usage_00057.pdb # 4: usage_00105.pdb # 5: usage_00106.pdb # 6: usage_00167.pdb # 7: usage_00257.pdb # 8: usage_00268.pdb # # Length: 84 # Identity: 12/ 84 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 84 ( 36.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 84 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 GYFAGTN-CYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNT-QPSPG-------- 50 usage_00056.pdb 1 GYFAGTN-CYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNT-QPSPG-------- 50 usage_00057.pdb 1 GYFAGTN-CYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNT-QPSPG-------- 50 usage_00105.pdb 1 GYFAGTN-SYWIGFLTDNADVDLVMGHLKSSGLKILRVWGFNDVTS-QPSSG-------- 50 usage_00106.pdb 1 GYFAGTN-SYWIGFLTDNADVDLVMGHLKSSGLKILRVWGFNDVTS-QPSSG-------- 50 usage_00167.pdb 1 DFYFAGSNAYYFPFN-DQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIP-TGLPQYGNE 58 usage_00257.pdb 1 GYFAGTN-CYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNT-QPSPG-------- 50 usage_00268.pdb 1 GYFAGSN-AYWLAFLTNNDDVDKVLGDAESSGLRIMRVWGFNDVNT-VPSSG-------- 50 gyfag n Yw Fl Dvd ssGL RvWGFNDv ps g usage_00055.pdb 51 ------QIWFQKLSATGSTIN--- 65 usage_00056.pdb 51 ------QIWFQKLSATGSTIN--- 65 usage_00057.pdb 51 ------QIWFQKLSATGSTIN--- 65 usage_00105.pdb 51 ------TVWYQLHQDGKSTIN--- 65 usage_00106.pdb 51 ------TVWYQLHQDGKSTIN--- 65 usage_00167.pdb 59 GAGDPTNTVFQWFEADGTQTIDVS 82 usage_00257.pdb 51 ------QIWFQKLSATGSTIN--- 65 usage_00268.pdb 51 ------TVYFQLLQDGTATI---- 64 Q ti #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################