################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:29:15 2021 # Report_file: c_1370_202.html ################################################################################################ #==================================== # Aligned_structures: 30 # 1: usage_00046.pdb # 2: usage_00047.pdb # 3: usage_00226.pdb # 4: usage_00530.pdb # 5: usage_00531.pdb # 6: usage_00553.pdb # 7: usage_00554.pdb # 8: usage_00556.pdb # 9: usage_00557.pdb # 10: usage_00562.pdb # 11: usage_00675.pdb # 12: usage_00676.pdb # 13: usage_00679.pdb # 14: usage_00929.pdb # 15: usage_00945.pdb # 16: usage_01023.pdb # 17: usage_01025.pdb # 18: usage_01027.pdb # 19: usage_01065.pdb # 20: usage_01066.pdb # 21: usage_01067.pdb # 22: usage_01149.pdb # 23: usage_01150.pdb # 24: usage_01151.pdb # 25: usage_01185.pdb # 26: usage_01187.pdb # 27: usage_01477.pdb # 28: usage_01629.pdb # 29: usage_01653.pdb # 30: usage_01699.pdb # # Length: 62 # Identity: 40/ 62 ( 64.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 62 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 62 ( 33.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00046.pdb 1 ------VIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKK----SAGERIVDIIATD 50 usage_00047.pdb 1 NPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKR---SAGERIVDIIATD 57 usage_00226.pdb 1 --------ESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDII--- 49 usage_00530.pdb 1 ----------MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKR-KYSAGERIVDIIATD 49 usage_00531.pdb 1 ------------KELKKIIGQVRDQAEHLKTAVQMAVFIHNKKR-KYSAGERIVDIIATD 47 usage_00553.pdb 1 ------------KELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 47 usage_00554.pdb 1 ------------KELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 47 usage_00556.pdb 1 ---------SMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 51 usage_00557.pdb 1 ---------SMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 50 usage_00562.pdb 1 ---------SMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 50 usage_00675.pdb 1 ----------MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 49 usage_00676.pdb 1 ---------SMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR--YSAGERIVDIIATD 49 usage_00679.pdb 1 --------ESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 52 usage_00929.pdb 1 NPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 60 usage_00945.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01023.pdb 1 ------------KELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 47 usage_01025.pdb 1 -----------NKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 48 usage_01027.pdb 1 --------ESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-KYSAGERIVDIIATD 51 usage_01065.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01066.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01067.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01149.pdb 1 ---SQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 57 usage_01150.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01151.pdb 1 ---SQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 57 usage_01185.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 usage_01187.pdb 1 ---SQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 57 usage_01477.pdb 1 ---------SMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGYSAGERIVDIIATD 51 usage_01629.pdb 1 ----------MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKR-GYSAGERIVDIIATD 49 usage_01653.pdb 1 ----------MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKR--YSAGERIVDII--- 45 usage_01699.pdb 1 --QSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERIVDIIATD 58 KELKKIIGQVRDQAEHLKTAVQMAVFIHN K SAGERIVDII usage_00046.pdb 51 I- 51 usage_00047.pdb 58 I- 58 usage_00226.pdb -- usage_00530.pdb 50 I- 50 usage_00531.pdb 48 I- 48 usage_00553.pdb -- usage_00554.pdb -- usage_00556.pdb 52 IQ 53 usage_00557.pdb 51 I- 51 usage_00562.pdb 51 I- 51 usage_00675.pdb 50 I- 50 usage_00676.pdb 50 IQ 51 usage_00679.pdb 53 I- 53 usage_00929.pdb 61 IQ 62 usage_00945.pdb 59 IQ 60 usage_01023.pdb 48 IQ 49 usage_01025.pdb 49 I- 49 usage_01027.pdb -- usage_01065.pdb 59 IQ 60 usage_01066.pdb 59 IQ 60 usage_01067.pdb 59 IQ 60 usage_01149.pdb 58 IQ 59 usage_01150.pdb 59 IQ 60 usage_01151.pdb -- usage_01185.pdb 59 IQ 60 usage_01187.pdb 58 IQ 59 usage_01477.pdb 52 I- 52 usage_01629.pdb 50 I- 50 usage_01653.pdb -- usage_01699.pdb 59 IQ 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################