################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:29 2021 # Report_file: c_0736_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00152.pdb # 2: usage_00545.pdb # 3: usage_00546.pdb # 4: usage_00547.pdb # 5: usage_00548.pdb # 6: usage_00549.pdb # 7: usage_00550.pdb # 8: usage_00573.pdb # 9: usage_00722.pdb # # Length: 87 # Identity: 46/ 87 ( 52.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 87 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 87 ( 10.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00152.pdb 1 TGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGD-TAYSDDFFVGRVGG 59 usage_00545.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00546.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00547.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00548.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00549.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00550.pdb 1 -----RLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRN 55 usage_00573.pdb 1 -----RLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGD-TAYSDDFFVGRVGG 54 usage_00722.pdb 1 TGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGD-TAYSDDFFVGRVGG 59 RLA AGLK AD GS DYGRNYGV YD TD LP G D D F GR usage_00152.pdb 60 VATYRNSNFFGLVDGLNFAVQYLGK-- 84 usage_00545.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGK-- 80 usage_00546.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGK-- 80 usage_00547.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGK-- 80 usage_00548.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGK-- 80 usage_00549.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGKNG 82 usage_00550.pdb 56 LLTYRNNNGFGYIDGLSFALQYQGK-- 80 usage_00573.pdb 55 VATYRNSNFFGLVDGLNFAVQYLG--- 78 usage_00722.pdb 60 VATYRNSNFFGLVDGLNFAVQYLG--- 83 TYRN N FG DGL FA QY G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################