################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:05 2021 # Report_file: c_0171_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00149.pdb # 2: usage_00161.pdb # 3: usage_00162.pdb # 4: usage_00163.pdb # 5: usage_00202.pdb # 6: usage_00284.pdb # 7: usage_00285.pdb # 8: usage_00286.pdb # # Length: 233 # Identity: 20/233 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/233 ( 27.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 102/233 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00149.pdb 1 ---NVRNFCIIAHV-DHGKSTLADRLLEY-------------T-GAVK------------ 30 usage_00161.pdb 1 -DFKNINLGIFGHI-DHGKTTLSKVLTEI------------------------------- 27 usage_00162.pdb 1 -DFKNINLGIFGHI-DHGKTTLSKVLTEI-------------A---------------KR 30 usage_00163.pdb 1 -DFKNINLGIFGHI-DHGKTTLSKVLTEITI----------------------------- 29 usage_00202.pdb 1 ------NIGVVGHVDH-GKTTLVQAITG---IWTSKHSEELKR---------------G- 34 usage_00284.pdb 1 -DFKNINLGIFGHI-DHGKTTLSKVLTEI------------------------------- 27 usage_00285.pdb 1 MDFKNINLGIFGHI-DHGKTTLSKVLTEI-------------A---------------KR 31 usage_00286.pdb 1 MDFKNINLGIFGHI-DHGKTTLSKVLTEI-------------AST---SAHDKLPESQKR 43 N gi gH d GKtTL lte usage_00149.pdb 31 -------QAVRFYKAK---------------------------DGNTYKLHLIDTPG--- 53 usage_00161.pdb 28 -----G---FSAFKL----------------------------E--NYRITLVDAPGHA- 48 usage_00162.pdb 31 GITIDI-G-FSAFKL----------------------------E--NYRITLVDAPGHA- 57 usage_00163.pdb 30 -----DIG-FSAFKL----------------------------E--NYRITLVDAPGHA- 52 usage_00202.pdb 35 -M-TIKLG-YAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKF--LRRISFIDAP-G-H 87 usage_00284.pdb 28 -----G---FSAFKL----------------------------E--NYRITLVDAPGHA- 48 usage_00285.pdb 32 GITIDI-G-FSAFKL----------------------------E--NYRITLVDAPGHA- 58 usage_00286.pdb 44 GITIDI-G-FSAFKL----------------------------E--NYRITLVDAPGHA- 70 k yri l DaP usage_00149.pdb 54 --HVDFSYEVSRALAACEGALLLIDASQ-GIEAQTVANFWKAVEQDL-VIIPVINKIDLP 109 usage_00161.pdb 49 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 102 usage_00162.pdb 58 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 111 usage_00163.pdb 53 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 106 usage_00202.pdb 88 EVLMATMLS---GAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVV 144 usage_00284.pdb 49 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 102 usage_00285.pdb 59 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 112 usage_00286.pdb 71 D-LIRAVVS---AADIIDLALIVVDAKE-GPKTQTGEHMLILDHFNI-PIIVVITKSDNA 124 l s aa d Al vvdA e gp QT eh l iI Vi K D usage_00149.pdb 110 -SA-DVDRVKKQIEEVLGL--DPE--EAILASAKEGIGIEEILEAIVN----- 151 usage_00161.pdb 103 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNN- 153 usage_00162.pdb 112 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNNA 163 usage_00163.pdb 107 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNN- 157 usage_00202.pdb 145 SK-EEALSQYRQIKQFTKGT-WAENVPIIPVSALHKINIDSLIEGIEEYIK-- 193 usage_00284.pdb 103 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNN- 153 usage_00285.pdb 113 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNNA 164 usage_00286.pdb 125 GT-EEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNNA 176 e r k l iIp SAk g g del I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################