################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:12:09 2021 # Report_file: c_0578_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00112.pdb # 2: usage_00170.pdb # 3: usage_00171.pdb # 4: usage_00172.pdb # 5: usage_00247.pdb # # Length: 117 # Identity: 99/117 ( 84.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/117 ( 84.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/117 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00112.pdb 1 --------VLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI 52 usage_00170.pdb 1 --------VLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI 52 usage_00171.pdb 1 PFMDYFDGVLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI 60 usage_00172.pdb 1 --------VLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI 52 usage_00247.pdb 1 --------VLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI 52 VLMFVDISGFTAMTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDI usage_00112.pdb 53 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFETQEWEEGLDIRVKIGLAAG 109 usage_00170.pdb 53 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFET------D-IRVKIGLAAG 102 usage_00171.pdb 61 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFET---------RVKIGLAA- 107 usage_00172.pdb 53 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFET--------IRVKIGLAAG 101 usage_00247.pdb 53 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFETQEWEEGLDIRVKIGLAAG 109 LKFAGDALLALWRVERKQLKNIITVVIKCSLEIHGLFET RVKIGLAA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################