################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:14:35 2021 # Report_file: c_1492_114.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00043.pdb # 2: usage_00432.pdb # 3: usage_00433.pdb # 4: usage_00485.pdb # 5: usage_00500.pdb # 6: usage_00583.pdb # 7: usage_00606.pdb # 8: usage_00923.pdb # 9: usage_01009.pdb # 10: usage_01391.pdb # 11: usage_01743.pdb # 12: usage_01744.pdb # 13: usage_02224.pdb # 14: usage_02225.pdb # # Length: 42 # Identity: 2/ 42 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 42 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 42 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 QDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAK--- 39 usage_00432.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 39 usage_00433.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 39 usage_00485.pdb 1 -----QALSLSVTLQLVTN--QVGHHDIYETRQLLEGWAALH 35 usage_00500.pdb 1 QDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSK--- 39 usage_00583.pdb 1 QDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSK--- 39 usage_00606.pdb 1 -EITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 38 usage_00923.pdb 1 -EITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQAR--- 38 usage_01009.pdb 1 -EITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 38 usage_01391.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 39 usage_01743.pdb 1 QDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAK--- 39 usage_01744.pdb 1 QDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAK--- 39 usage_02224.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 39 usage_02225.pdb 1 QEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAK--- 39 lf LqVk il d ycppet vll syavq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################