################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:08:43 2021 # Report_file: c_0322_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00006.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00054.pdb # 5: usage_00055.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00068.pdb # 9: usage_00069.pdb # 10: usage_00071.pdb # 11: usage_00089.pdb # 12: usage_00099.pdb # 13: usage_00156.pdb # 14: usage_00183.pdb # # Length: 151 # Identity: 71/151 ( 47.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 71/151 ( 47.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/151 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00013.pdb 1 SLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQL 60 usage_00014.pdb 1 SLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQL 60 usage_00054.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00055.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00066.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00067.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00068.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00069.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00071.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00089.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00099.pdb 1 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 60 usage_00156.pdb 1 SLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQL 60 usage_00183.pdb 1 SLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQL 60 SL DQMS LQS WME L LGV RSL DEL A D DE AGL L A LQL usage_00006.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00013.pdb 61 VRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEA--G----R 114 usage_00014.pdb 61 VRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEA--G----R 114 usage_00054.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00055.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00066.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00067.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00068.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00069.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00071.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00089.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00099.pdb 61 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME-DP 119 usage_00156.pdb 61 VRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAG-E----R 115 usage_00183.pdb 61 VRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAG-R-GGAE 118 V LE EE V LKA ALANSDS HIED EAV L LHEAL YEA usage_00006.pdb 120 RRAGKMLMT---------------------- 128 usage_00013.pdb 115 RRAGRLLLTLPLLRQTAGKVLAHFYGVK--- 142 usage_00014.pdb 115 RRAGRLLL----------------------- 122 usage_00054.pdb 120 RRAGKMLMT---------------------- 128 usage_00055.pdb 120 RRAGKMLM----------------------- 127 usage_00066.pdb 120 RRAGKMLM----------------------- 127 usage_00067.pdb 120 RRAGKMLM----------------------- 127 usage_00068.pdb 120 RRAGKMLM----------------------- 127 usage_00069.pdb 120 RRAGKMLM----------------------- 127 usage_00071.pdb 120 RRAGKMLMTLPLLRQTSTKAVQHFYNIKLEG 150 usage_00089.pdb 120 RRAGKMLMTLPLLRQTSTKAVQHFYNIKL-- 148 usage_00099.pdb 120 RRAGKMLM----------------------- 127 usage_00156.pdb 116 RRAGRLLL----------------------- 123 usage_00183.pdb 119 RRAGRLLLTLPLLRQTAGKVLAHFY------ 143 RRAG L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################