################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:37 2021 # Report_file: c_0931_72.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00070.pdb # 2: usage_00335.pdb # 3: usage_00337.pdb # 4: usage_00340.pdb # 5: usage_00342.pdb # 6: usage_00343.pdb # 7: usage_00345.pdb # 8: usage_00346.pdb # 9: usage_00347.pdb # 10: usage_00848.pdb # 11: usage_00849.pdb # # Length: 47 # Identity: 4/ 47 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 47 ( 51.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 47 ( 34.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 -KVLTIGGADAETLMDAAVDVFADGQPKLVSDQAVSLG-QNVL---- 41 usage_00335.pdb 1 SGVLLTGSDN------GLTISGFDYEVSAEAQVGAEIVSP---GSVL 38 usage_00337.pdb 1 -GVLLTGSDN------GLTISGFDYEVSAEAQVGAEIVSP---GSVL 37 usage_00340.pdb 1 --VLLTGSDN------GLTISGFDYEVSAEAQVGAEIVSP---GSVL 36 usage_00342.pdb 1 -GVLLTGTDE------GLTISGFDYEVSAEVKVSAEIASA---GSVL 37 usage_00343.pdb 1 -GVLLTGTDE------GLTISGFDYEVSAEVKVSAEIASA---GSVL 37 usage_00345.pdb 1 -GVLLTGTDE------GLTISGFDYEVSAEVKVSAEIASA---GSVL 37 usage_00346.pdb 1 --VLLTGTDE------GLTISGFDYEVSAEVKVSAEIASA---GSVL 36 usage_00347.pdb 1 -GVLLTGTDE------GLTISGFDYEVSAEVKVSAEIASA---GSVL 37 usage_00848.pdb 1 --VLLTGSDN------GLTISGFDYEVSAEAQVGAEIVSP---GSVL 36 usage_00849.pdb 1 --VLLTGSDN------GLTISGFDYEVSAEAQVGAEIVSP---GSVL 36 VLltG d gltisgfDyevsae v aei #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################