################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:21 2021 # Report_file: c_0233_2.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00081.pdb # 4: usage_00127.pdb # 5: usage_00128.pdb # # Length: 161 # Identity: 148/161 ( 91.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 151/161 ( 93.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/161 ( 5.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKH-ITTLQASFLTKKLNIGGKRVNLAIWDT 59 usage_00080.pdb 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKH-ITTLQASFLTKKLNIGGKRVNLAIWDT 59 usage_00081.pdb 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQA-SFLTKKLNIGGKRVNLAIWDT 59 usage_00127.pdb 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKH-ITTLGASFLTKKLNIGGKRVNLAIWDT 59 usage_00128.pdb 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKH-ITTLGASFLTKKLNIGGKRVNLAIWDT 59 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKH iTtl SFLTKKLNIGGKRVNLAIWDT usage_00079.pdb 60 AG-----RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 114 usage_00080.pdb 60 A------RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 113 usage_00081.pdb 60 A--PIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 117 usage_00127.pdb 60 AGQPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 119 usage_00128.pdb 60 AGQ--YYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 117 A RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV usage_00079.pdb 115 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE- 154 usage_00080.pdb 114 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIET 154 usage_00081.pdb 118 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIET 158 usage_00127.pdb 120 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIET 160 usage_00128.pdb 118 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE- 157 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################