################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:06:41 2021 # Report_file: c_0773_55.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00071.pdb # 2: usage_00104.pdb # 3: usage_00180.pdb # 4: usage_00221.pdb # # Length: 65 # Identity: 5/ 65 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/ 65 ( 76.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 65 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00071.pdb 1 PVALVTG-AA-KRLGRSIAEGLHAE-GYAVCLHYH----RSAAEANALSATLNARRPNSA 53 usage_00104.pdb 1 -PAAVEIGRTSRSTVADLARRTVDEGYGVYLTY-NLDGGD-RTADVSAFTRELYG----S 53 usage_00180.pdb 1 PVALVTG-AA-KRLGRSIAEGLHAE-GYAVCLHYH----RSAAEANALSATLNARRPNSA 53 usage_00221.pdb 1 PVALVTG-AA-KRLGRSIAEGLHAE-GYAVCLHYH----RSAAEANALSATLNARRPNSA 53 vAlVtg aa krlgrsiAeglhaE gyavclh h r aaeanalsatlnar a usage_00071.pdb 54 ITVQ- 57 usage_00104.pdb 54 EAVRT 58 usage_00180.pdb 54 ITVQ- 57 usage_00221.pdb 54 ITVQ- 57 itVq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################