################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:25 2021 # Report_file: c_0382_25.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00084.pdb # 2: usage_00089.pdb # 3: usage_00092.pdb # 4: usage_00125.pdb # 5: usage_00127.pdb # 6: usage_00243.pdb # 7: usage_00596.pdb # 8: usage_00712.pdb # 9: usage_00785.pdb # # Length: 72 # Identity: 11/ 72 ( 15.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 72 ( 38.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 72 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 ----ALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSN--ILQPVGLTVFENWLYW 54 usage_00089.pdb 1 -----LTLDYEEQKLYWADAKLNFIHKSNLDG--TNRQ---------PFALTLFEDILYW 44 usage_00092.pdb 1 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--------PFALTLFEDILYW 52 usage_00125.pdb 1 ----GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFEDILYW 54 usage_00127.pdb 1 ----GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFEDILYW 54 usage_00243.pdb 1 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYW 58 usage_00596.pdb 1 ----GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFEDILYW 54 usage_00712.pdb 1 ----GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFEDILYW 54 usage_00785.pdb 1 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFW 60 ltlD lyW D kl I l G r Pf lt FEd lyW usage_00084.pdb 55 IDKQQQMIEKID 66 usage_00089.pdb 45 TDWSTHSILACN 56 usage_00092.pdb 53 TDWSTHSILACN 64 usage_00125.pdb 55 TDWSTHSILACN 66 usage_00127.pdb 55 TDWSTHSILACN 66 usage_00243.pdb 59 TDWHTKSINSAN 70 usage_00596.pdb 55 TDWSTHSILACN 66 usage_00712.pdb 55 TDWSTHSILACN 66 usage_00785.pdb 61 TDIINEAIFSAN 72 tD I n #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################