################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:50:20 2021 # Report_file: c_0793_19.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00031.pdb # 2: usage_00032.pdb # 3: usage_00063.pdb # 4: usage_00064.pdb # 5: usage_00065.pdb # 6: usage_00066.pdb # 7: usage_00067.pdb # 8: usage_00116.pdb # 9: usage_00117.pdb # 10: usage_00118.pdb # 11: usage_00119.pdb # 12: usage_00120.pdb # 13: usage_00121.pdb # 14: usage_00123.pdb # 15: usage_00124.pdb # 16: usage_00125.pdb # 17: usage_00126.pdb # 18: usage_00177.pdb # 19: usage_00178.pdb # 20: usage_00179.pdb # 21: usage_00180.pdb # 22: usage_00181.pdb # 23: usage_00182.pdb # 24: usage_00263.pdb # 25: usage_00264.pdb # 26: usage_00265.pdb # 27: usage_00266.pdb # 28: usage_00267.pdb # 29: usage_00268.pdb # 30: usage_00375.pdb # 31: usage_00392.pdb # 32: usage_00458.pdb # 33: usage_00459.pdb # 34: usage_00460.pdb # 35: usage_00467.pdb # # Length: 95 # Identity: 0/ 95 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 95 ( 5.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 95 ( 45.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00031.pdb 1 -PTLIIHGDSDATVPF-E---Y---SGK---LTHEAIPNSKVALIK-G--G---PH---G 40 usage_00032.pdb 1 -PTLIIHGDSDATVPF-E---Y---SGK---LTHEAIPNSKVALIK-G--G---PH---G 40 usage_00063.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00064.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00065.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00066.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00067.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00116.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00117.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00118.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00119.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00120.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00121.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00123.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00124.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00125.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00126.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00177.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00178.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00179.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00180.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00181.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00182.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00263.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00264.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00265.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00266.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00267.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00268.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00375.pdb 1 -PTFIWTTADDPIVPA-T---NTLAYAT---ALATAKIPYELHVFK-HGPH---G-LALA 47 usage_00392.pdb 1 HPALFHMGGQDHFVP--APSRQ---LIT---EGFGANPLLQVHWYE-G--A---GH---S 43 usage_00458.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00459.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00460.pdb 1 -PTLVIHGDGDQIVPF-E---T---TGK---VAAELIKGAELKVYK-D--A---PH---G 40 usage_00467.pdb 1 ---PLVIWHG--GDSCCN---P---LSGAIKKVEKKIPGIYVLSLEIG--KTLEDV---E 44 vp usage_00031.pdb 41 LNA-T--------HA--KEFNEALLLFLK------ 58 usage_00032.pdb 41 LNA-T--------HA--KEFNEALLLFLKD----- 59 usage_00063.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00064.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00065.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00066.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00067.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00116.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00117.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00118.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00119.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00120.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00121.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00123.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00124.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00125.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00126.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00177.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00178.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00179.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00180.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00181.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00182.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00263.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00264.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00265.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00266.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00267.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00268.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00375.pdb 48 NAQ-T--------AWKVAHWLTLALEWLADNR--- 70 usage_00392.pdb 44 FAR-TGSSDYVASAA--ALANERTLDFLAP--LQS 73 usage_00458.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00459.pdb 41 FAV-T--------HA--QQLNEDLLAFLK------ 58 usage_00460.pdb 41 FAV-T--------HA--QQLNEDLLAFLKR----- 59 usage_00467.pdb 45 NSFFL--N-----VN--SQVTTVCQALAKD----- 65 t l l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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