################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:51 2021 # Report_file: c_0519_10.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00060.pdb # 7: usage_00099.pdb # 8: usage_00100.pdb # 9: usage_00119.pdb # 10: usage_00120.pdb # # Length: 117 # Identity: 32/117 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/117 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/117 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -QRLAAELGIAIVAPDTSPR-GEGVAD---D--E-GYDLGQGAGFYVNATQAPWNRHYQM 52 usage_00008.pdb 1 -HQSASEHGLVVIAPDTSPRG-----C---N--IF----GTGAGFYVDATEDPWKTNYRM 45 usage_00009.pdb 1 -HQSASEHGLVVIAPDTSPR-GC--NIKGED--E-SWDFGTGAGFYVDATEDPWKTNYRM 53 usage_00031.pdb 1 -QRLAAELGIAIVAPDTSPR-GEGVAD---D--E-GYDLGQGAGFYVNATQAPWNRHYQ- 51 usage_00032.pdb 1 -QRLAAELGIAIVAPDTSPR-GEGVAD---D--E-GYDLGQGAGFYVNATQAPWNRHYQ- 51 usage_00060.pdb 1 -FKKAAELGIAIVAPDTSPR-GDNVPN---E--D-SYDFAQGAGFYVNATQAPYNTHFNM 52 usage_00099.pdb 1 WQFQADKYGFAIVFPDTSPR-GDEVAN---DPEG-SWDFGQGAGFYLNATQEPYAQHYQM 55 usage_00100.pdb 1 WQFQADKYGFAIVFPDTSPR-GDEVAN---DPEG-SWDFGQGAGFYLNATQEPYAQHYQM 55 usage_00119.pdb 1 FQRYAAEHQVIVVAPDTSPR-GEQVPN---D--D-AYDLGQSAGFYLNATEQPWAANYQM 53 usage_00120.pdb 1 -QRYAAEHQVIVVAPDTSPR-GEQVPN---D--D-AYDLGQSAGFYLNATEQPWAANYQM 52 A PDTSPR g AGFY AT P y usage_00007.pdb 53 YDYVVNELPELIESMFP-V-S-DKRAIAGHSMGGHGALTIALRNP--ERYQSVSAF- 103 usage_00008.pdb 46 YSYVTEELPQLINANFP-V-DPQRMSIFGHSMGGHGALICALKNP--GKYKSVSAF- 97 usage_00009.pdb 54 YSYVTEELPQLINANFP-V-DPQRMSIFGHSMGGHGALICALKNP--GKYKSVSAFA 106 usage_00031.pdb 52 YDYVVNELPELIESFPV----SDKRAIAGH-SGGHGALTIALRNP--ERYQSVSAF- 100 usage_00032.pdb 52 YDYVVNELPELIESFPV----SDKRAIAGH-SGGHGALTIALRNP--ERYQSVSAF- 100 usage_00060.pdb 53 YDYVVNELPALIEQHFP-V-T-STKAISGHSMGGHGALMIALKNP--QDYVSASAFS 104 usage_00099.pdb 56 YDYIHKELPQTLDSHFNKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFA 112 usage_00100.pdb 56 YDYIHKELPQTLDSHFNKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFA 112 usage_00119.pdb 54 YDYILNELPRLIEKHFP-T-N-GKRSIMGHSMGGHGALVLALRNQ--ERYQSVSAFS 105 usage_00120.pdb 53 YDYILNELPRLIEKHFP-T-N-GKRSIMGHSMGGHGALVLALRNQ--ERYQSVSAFS 104 Y Y ELP I GH GG GA L Y S SAF #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################