################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:32:50 2021 # Report_file: c_0212_1.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00041.pdb # 7: usage_00042.pdb # 8: usage_00043.pdb # 9: usage_00044.pdb # 10: usage_00119.pdb # 11: usage_00120.pdb # 12: usage_00125.pdb # 13: usage_00173.pdb # 14: usage_00176.pdb # 15: usage_00200.pdb # 16: usage_00247.pdb # # Length: 110 # Identity: 53/110 ( 48.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 66/110 ( 60.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/110 ( 16.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00035.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00036.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 57 usage_00037.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00038.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00041.pdb 1 --QLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 56 usage_00042.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00043.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 57 usage_00044.pdb 1 -VQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 57 usage_00119.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00120.pdb 1 QVQLVQSGAEVKRPGSSVTVSCKASGG--SFSTYALSWVRQAPGRGLEWMGGVIPLLTIT 58 usage_00125.pdb 1 -VQLVQSGAEVKKPGSSVKVSCKASGY--TFSSNVISWVRQAPGQGLEWMGGVIPIVDIA 57 usage_00173.pdb 1 -QLLEQSGAEVKKPGSSVKVSCETSGGTF--DNYALNWVRQAPGQGLEWIGGVVPLFGTT 57 usage_00176.pdb 1 --QLVQSGAEVKKPGSSVKVSCKASGG--TFNSHAISWVRQAPGQGLEWMGGINPILGIA 56 usage_00200.pdb 1 QVQLVQSGAEVKKPGSSVKVSCKASGF--S--SYAISWVRQAPGQGLEWMGGIIPIFGTA 56 usage_00247.pdb 1 QVQLVQSGAEVKKPGSSVKVSCEASGG--TLSNYVITWVRQAPGQGLEWMGGFIPTFRTA 58 qLvQSGAEVK PGSSV VSC aSG WVRQAPG GLEWmGG P usage_00034.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 102 usage_00035.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 102 usage_00036.pdb 58 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 101 usage_00037.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 102 usage_00038.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 102 usage_00041.pdb 57 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 100 usage_00042.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAR---------- 98 usage_00043.pdb 58 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAR---------- 97 usage_00044.pdb 58 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTT------ 101 usage_00119.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAR---------- 98 usage_00120.pdb 59 NYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGT------- 101 usage_00125.pdb 58 NYAQRFKGRVTITADESTSTTYMELSSLRSEDTAVYYCAS---------- 97 usage_00173.pdb 58 RNAQKFQGRVTISDDKSTGTGHMELRSLRSEDTAVYYCVRSVT------- 100 usage_00176.pdb 57 NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARHYEIQ-IGRY 105 usage_00200.pdb 57 NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAREPDYYD---- 102 usage_00247.pdb 59 MYAQGFQGRVTITADESTSIAYMELTNLRSEDTAVYYCA----------- 97 yA FqGR TItaD STst y EL sLR EDTAVYYCa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################