################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:28 2021 # Report_file: c_1025_53.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00085.pdb # 2: usage_00086.pdb # 3: usage_00088.pdb # 4: usage_00335.pdb # # Length: 71 # Identity: 27/ 71 ( 38.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/ 71 ( 88.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 71 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 LTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFA-ENDQ-HNCKRCQARWK 58 usage_00086.pdb 1 -TTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAE------NCKRCQARWK 53 usage_00088.pdb 1 -TTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFA-ENDQEHNCKRCQARWK 58 usage_00335.pdb 1 -TSFKMVVIPEEMSIYESERAMKALEKYSIHADGVIVNQVLPE-E-S---DCEFCNARRK 54 TtFvcVcIsEflSlYEtERliqeLisYdmdvnsiIVNQlLfa nCkrCqARwK usage_00085.pdb 59 MQKKYLDQIDE 69 usage_00086.pdb 54 MQKKYLDQIDE 64 usage_00088.pdb 59 MQKKYLDQIDE 69 usage_00335.pdb 55 LQQERLKQIRE 65 mQkkyLdQIdE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################