################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:18:32 2021 # Report_file: c_1193_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00165.pdb # 2: usage_00166.pdb # 3: usage_00167.pdb # 4: usage_00168.pdb # 5: usage_00169.pdb # 6: usage_00170.pdb # 7: usage_00293.pdb # 8: usage_00425.pdb # 9: usage_01096.pdb # 10: usage_01149.pdb # # Length: 78 # Identity: 19/ 78 ( 24.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 78 ( 29.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 78 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00165.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00166.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00167.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00168.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00169.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00170.pdb 1 VNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSM--VYPGNYGFVPHTLSEDGDPIDVL 58 usage_00293.pdb 1 FNVIIEIPANGGEVKYEYDKELGFLTVDRFP----TSRYPCNYGFVPSTLAQDGDPLDVL 56 usage_00425.pdb 1 IYVAIEIPANASPIKYEID---DALLVDRFA----TPFYPANYGYINNTLADDGDALDVL 53 usage_01096.pdb 1 VYALIEIPKG-SRNKYELDKKTGLLKLDRVLYSPF--FYPVDYGIIPQTWYDDGDPFDIM 57 usage_01149.pdb 1 VYALIEIPKG-SRNKYELDKKTGLLKLDRVLYSPF--FYPVDYGIIPQTWYDDGDPFDI- 56 E KYE D g L DR YP YG p T DGDp D usage_00165.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00166.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00167.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00168.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00169.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00170.pdb 59 ICNTRPLLPGCVIN---- 72 usage_00293.pdb 57 VLTPVPVQPGVLR----- 69 usage_00425.pdb 54 VITPYPVAPGSVIR---- 67 usage_01096.pdb 58 VIMREPVYPLTIIEARPI 75 usage_01149.pdb 57 VI-REPVYPLTIIE---- 69 P P i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################