################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:48:18 2021 # Report_file: c_0699_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00057.pdb # 2: usage_00132.pdb # 3: usage_00173.pdb # 4: usage_00242.pdb # 5: usage_00278.pdb # 6: usage_00339.pdb # 7: usage_00364.pdb # 8: usage_00419.pdb # 9: usage_00443.pdb # 10: usage_00626.pdb # 11: usage_00892.pdb # 12: usage_01102.pdb # 13: usage_01103.pdb # 14: usage_01440.pdb # 15: usage_01441.pdb # 16: usage_01597.pdb # 17: usage_01689.pdb # # Length: 116 # Identity: 26/116 ( 22.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 41/116 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/116 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 GLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 59 usage_00132.pdb 1 GLHGFHVHG---------------A---------------G-GDLGNVTADKDGVADVSI 29 usage_00173.pdb 1 GLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSPEDETRHA-GDLGNITVGDDGTACFTI 59 usage_00242.pdb 1 -LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 58 usage_00278.pdb 1 GLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTAGKDGVANVSI 59 usage_00339.pdb 1 GLHGFHVHEE-------------------------------VGSLGNVTADKDGVADVSI 29 usage_00364.pdb 1 GLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 59 usage_00419.pdb 1 -DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHV-GDLGNVTADKNGVAIVDI 58 usage_00443.pdb 1 -LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 58 usage_00626.pdb 1 GLHGFHVHEFGDNTAGSTSAGPHFNP-------------HV-GDLGNVTADKDGVADVSI 46 usage_00892.pdb 1 -LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDAVADVSI 58 usage_01102.pdb 1 GLFGFHVHEEED-----A--GPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 52 usage_01103.pdb 1 -LFGFHVHG-------------------------------AGGDLGNVTADKDGVADVSI 28 usage_01440.pdb 1 GLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 59 usage_01441.pdb 1 -LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 58 usage_01597.pdb 1 -LHGFHVHEFGDNTAGSTSAGPHFNPLSRKHGGPKDEERHV-GDLGNVTADKDGVADVSI 58 usage_01689.pdb 1 GLHGFHVHG---------------A---------------G-GDLGNVTADKDGVADVSI 29 l GFHVH GdLGNvTa kdgvA v I usage_00057.pdb 60 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 108 usage_00132.pdb 30 EDSVISLSGDHSIIGRTLVVHEKAG---------------AGAGSRLASGVIGIAQ 70 usage_00173.pdb 60 VDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKSTGN--AGGRIACGI----- 108 usage_00242.pdb 59 EDSVISLSGD-HIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 106 usage_00278.pdb 60 EDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGN--AGSRLACGV----- 108 usage_00339.pdb 30 EDSVISLSGDHAIIGRTLVVHEKADDLGKGGN-------N--AGSRLACGV----- 71 usage_00364.pdb 60 EDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTETGN--AGSRLACGV----- 108 usage_00419.pdb 59 VDPLISLSGE-SIIGRTMVVHEKPDDLGRGGNEESTKTGN--AGSRLACGV----- 106 usage_00443.pdb 59 EDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 107 usage_00626.pdb 47 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGN------------SRLACGV----- 85 usage_00892.pdb 59 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 107 usage_01102.pdb 53 EDSVISLSGDHAIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 101 usage_01103.pdb 29 EDSVISLSGDHSIIGRTLVVH-EK-------------------GSRLASGV----- 59 usage_01440.pdb 60 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 108 usage_01441.pdb 59 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 107 usage_01597.pdb 59 EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGN--AGSRLACGV----- 107 usage_01689.pdb 30 EDSVISLSGDHSIIGRTLVVHEKAG---------------AGAGSRLASGVIGIAQ 70 D IsLsG IIGRt VVH sRlA Gv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################