################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:37:41 2021 # Report_file: c_0385_34.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00007.pdb # 2: usage_00089.pdb # 3: usage_00100.pdb # 4: usage_00101.pdb # 5: usage_00132.pdb # 6: usage_00153.pdb # 7: usage_00163.pdb # 8: usage_00245.pdb # 9: usage_00280.pdb # 10: usage_00343.pdb # 11: usage_00364.pdb # 12: usage_00407.pdb # 13: usage_00469.pdb # 14: usage_00486.pdb # 15: usage_00489.pdb # 16: usage_00529.pdb # # Length: 79 # Identity: 18/ 79 ( 22.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 79 ( 29.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 79 ( 26.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ----PSVSVAPGQTARITCG---GNN--IGS-KSVHWYQQKPGQAPVLVVYDDSDRPPGI 50 usage_00089.pdb 1 ----PSVSVSPGQTASITCS---GDK--LGN-KFTSWYQRKPGQSPVLVIYQDTKRPSGI 50 usage_00100.pdb 1 ----PSVSVSPGQTATITCS---G----A-S-TNVCWYQVKPGQSPEVVIFENYKRPSGI 47 usage_00101.pdb 1 ----PSVSVSPGQTATITCS---G----A-S-TNVCWYQVKPGQSPEVVIFENYKRPSGI 47 usage_00132.pdb 1 ----PSASGSPGQSITISCT---G----TSN-NFVSWYQQHAGKAPKLVIYDVNKRPSGV 48 usage_00153.pdb 1 ----PSVSVSPGQTASITCS---GDI--LGD-KYVSWYQQKSGQSPLLVIYEDTKRPSGI 50 usage_00163.pdb 1 ----PSVSVVPGQTARISCS---GDN--IPY-EYASWYQQKPGQAPVLVIYGDNNRPSGI 50 usage_00245.pdb 1 ----PSVSGAPGQRVTISCTSSN-----------VHWYQQLPGTAPTLLIYVNSNRPSGV 45 usage_00280.pdb 1 -----SVSAAPGQKVTISCS---GSSSNIGN-NFVSWYQQRPGTAPSLLIYETNKRPSGI 51 usage_00343.pdb 1 LTQPPSVSVSPGQTATITCS---GDK--VAS-KNVCWYQVKPGQSPEVVMYENYKRPSGI 54 usage_00364.pdb 1 ----ASVSGSPGQTITISCN---GTSSDVGGFDSVSWYQQSPGKAPKVMVFDVSHRPSGI 53 usage_00407.pdb 1 ----ASVSGSPGQSITISCT---GTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGV 53 usage_00469.pdb 1 ----SSASVTVGETVKITCS---GDQ--LPK-NFAYWFQQKSDKNILLLIYMDNKRPSGI 50 usage_00486.pdb 1 ----PSVSVSPGQTASITCS---GDK--LGN-KFTSWYQRKPGQSPVLVIYQDTKRPSGI 50 usage_00489.pdb 1 LTQPPSVSVSPGQTATITCS---G----A-S-TNVCWYQVKPGQSPEVVIFENYKRPSGI 51 usage_00529.pdb 1 LTQPPSASGSLGQSVTISCT---GTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGV 57 S S Gq I C W Q g p RPsG usage_00007.pdb 51 PERFSGSNSGNTATLTISR 69 usage_00089.pdb 51 PERFSGSTSGNTATLTISG 69 usage_00100.pdb 48 PDRFSGSKSGSTATLTIRG 66 usage_00101.pdb 48 PDRFSGSKSGSTATLTIRG 66 usage_00132.pdb 49 PDRFSGSKSGNTASLTVSG 67 usage_00153.pdb 51 PDRFSGSKSGNTATLTISG 69 usage_00163.pdb 51 PERFSGSNSGNTATLTISG 69 usage_00245.pdb 46 PDRFSGSKSGTSASLAITG 64 usage_00280.pdb 52 PDRFSGSKSATSATLAITG 70 usage_00343.pdb 55 PDRFSGSKSGSTATLTIRG 73 usage_00364.pdb 54 SNRFSGSKSGNTASLTISG 72 usage_00407.pdb 54 SSRFSGSKSGNTASLTISG 72 usage_00469.pdb 51 PERFSGSTSGTTATLTISG 69 usage_00486.pdb 51 PERFSGSTSGNTATLTISG 69 usage_00489.pdb 52 PDRFSGSKSGSTATLTIRG 70 usage_00529.pdb 58 PDRFSGSKSGNTASLTV-- 74 RFSGS Sg A L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################