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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:37:47 2021
# Report_file: c_1088_1.html
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#====================================
# Aligned_structures: 7
#   1: usage_00018.pdb
#   2: usage_00059.pdb
#   3: usage_00075.pdb
#   4: usage_00157.pdb
#   5: usage_00193.pdb
#   6: usage_00253.pdb
#   7: usage_00277.pdb
#
# Length:        107
# Identity:       13/107 ( 12.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     31/107 ( 29.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           36/107 ( 33.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00018.pdb         1  ------------ICPLMHFVNKYTK--FGNGTYLYFFNHRASNLVWPEWM----------   36
usage_00059.pdb         1  --------DHFFTCPTNEYAQALAE--RGASVHYYYFTHRTSTSLWGEWM----------   40
usage_00075.pdb         1  ------------ICPLMHFVNKYTK--FGNGTYLYFFNHRASNLVWPEWM----------   36
usage_00157.pdb         1  ------------ICPLMHFVNKYTK--FGNGTYLYFFNHRASNLVWPEWM----------   36
usage_00193.pdb         1  ------------ICPLMHFVNKYTK--FGNGTYLYFFNHRASNLVWPEWM----------   36
usage_00253.pdb         1  DNFMDLCSHFYFWFPMHRLLQLRFNHTSGTPVYLYRFDFDSEDLIN-P--YRIMRSGRGV   57
usage_00277.pdb         1  -------------CPLMHFVNKYTK--FGNGTYLYFFNHRASNLVWPEWM----------   35
                                        cP             G   ylY F hr s l w e            

usage_00018.pdb        37  -GVIHGYEIEFVFGLPLVKE-LNYT--AEEEALSRRIMHYWATFAKT   79
usage_00059.pdb        41  -GVLHGDEIEYFFGQPLNNS-LQYR--PVERELGKRMLSAVIEFAK-   82
usage_00075.pdb        37  -GVIHGYEIEFVFGLPLVKE-LNYT--AEEEALSRRIMHYWATFAKT   79
usage_00157.pdb        37  -GVIHGYEIEFVFGLPLVKE-LNYT--AEEEALSRRIMHYWATFAKT   79
usage_00193.pdb        37  -GVIHGYEIEFVFGLPLVKE-LNYT--AEEEALSRRIMHYWATFAKT   79
usage_00253.pdb        58  KGVSHTDELTYFFWN---QLAKRMPKESREYKTIERMTGIWTQFAT-  100
usage_00277.pdb        36  -GVIHGYEIEFVFGLPLVKE-LNYT--AEEEALSRRIMHYWATFAKT   78
                            GV Hg Eie  Fg       l y     E  l  R    w  FAk 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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