################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:32 2021 # Report_file: c_1462_114.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00411.pdb # 2: usage_00637.pdb # 3: usage_00798.pdb # 4: usage_01554.pdb # 5: usage_01868.pdb # 6: usage_01869.pdb # 7: usage_01870.pdb # 8: usage_01871.pdb # 9: usage_01872.pdb # 10: usage_02454.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 33 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 33 ( 54.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00411.pdb 1 ----PVVL-VVGDP---GRVDKIKVVC------ 19 usage_00637.pdb 1 -----IVSVLGHVDH---GKTTLLDHIRGSAVA 25 usage_00798.pdb 1 -------CCADRAK---GPHEASLYDIQ--Q-- 19 usage_01554.pdb 1 ----K-IA-ITKGRIQK-QVTKLLENAD----- 21 usage_01868.pdb 1 ----PICCILGHVDT---GKTKLLDKIR----- 21 usage_01869.pdb 1 NLRSPICCILGHVDT---GKTKLLDKIR----- 25 usage_01870.pdb 1 ----PICCILGHVDT---GKTKLLDKIR----- 21 usage_01871.pdb 1 ----PICCILGHVNT---GKTKLLDKIR----- 21 usage_01872.pdb 1 ----PICCILGHVNT---GKTKLLDKIR----- 21 usage_02454.pdb 1 ----K-IA-ITKGRIQK-QVTKLLENAD----- 21 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################