################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:20:22 2021 # Report_file: c_0055_18.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00053.pdb # 4: usage_00057.pdb # 5: usage_00165.pdb # 6: usage_00166.pdb # 7: usage_00316.pdb # 8: usage_00317.pdb # 9: usage_00344.pdb # 10: usage_00345.pdb # # Length: 193 # Identity: 50/193 ( 25.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/193 ( 25.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/193 ( 15.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 -PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 59 usage_00052.pdb 1 -PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 59 usage_00053.pdb 1 -PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 59 usage_00057.pdb 1 -PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 59 usage_00165.pdb 1 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEAR 60 usage_00166.pdb 1 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEAR 60 usage_00316.pdb 1 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 60 usage_00317.pdb 1 -PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR 59 usage_00344.pdb 1 -PPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEAR 59 usage_00345.pdb 1 -PPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEAR 59 P A AY GGA SV T F G L R P LRKDF P EAR usage_00051.pdb 60 AHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD 119 usage_00052.pdb 60 AHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD 119 usage_00053.pdb 60 AHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD 119 usage_00057.pdb 60 AHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD 119 usage_00165.pdb 61 AFGASAALLIVALLGE-LTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRD 119 usage_00166.pdb 61 AFGASAALLIVALLGE-LTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRD 119 usage_00316.pdb 61 AHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD 120 usage_00317.pdb 60 AHGAD-LLLIVAALEQSVLVS-LDRTESLG-TALVEVHTEQEADRALKAGAKVIGVNARD 116 usage_00344.pdb 60 SWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRN 119 usage_00345.pdb 60 SWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRN 119 GA L I A LG AL EVH E E AL G N R usage_00051.pdb 120 -----VDRDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSG 171 usage_00052.pdb 120 LMTLDVDRDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS- 175 usage_00053.pdb 120 LMTLDVDRDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS- 175 usage_00057.pdb 120 LMTLD--RDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS- 173 usage_00165.pdb 120 LATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAP 178 usage_00166.pdb 120 LATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAP 178 usage_00316.pdb 121 LMTLDVDRDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS- 176 usage_00317.pdb 117 -LTLDVDRDCFARIAPGLP---SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSG 172 usage_00344.pdb 120 LRSFEVNLAVSERLAKMAP---SDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQH 176 usage_00345.pdb 120 LRSFEVNLAVSERLAKMAP---SDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQH 176 R ESG L G L usage_00051.pdb 172 DPRAAVADLVTA- 183 usage_00052.pdb ------------- usage_00053.pdb ------------- usage_00057.pdb ------------- usage_00165.pdb 179 DLEAALRELVG-- 189 usage_00166.pdb 179 DLEAALREL---- 187 usage_00316.pdb ------------- usage_00317.pdb 173 DPRAAVADLVTAG 185 usage_00344.pdb 177 DVAAATRALLTG- 188 usage_00345.pdb 177 DVAAATRALLTG- 188 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################