################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:06:57 2021 # Report_file: c_1429_24.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00223.pdb # 2: usage_00224.pdb # 3: usage_00389.pdb # 4: usage_00633.pdb # 5: usage_00634.pdb # 6: usage_00635.pdb # 7: usage_00770.pdb # 8: usage_00785.pdb # 9: usage_00786.pdb # 10: usage_00787.pdb # 11: usage_00972.pdb # 12: usage_01103.pdb # 13: usage_01136.pdb # 14: usage_01477.pdb # 15: usage_01478.pdb # 16: usage_01562.pdb # 17: usage_01644.pdb # 18: usage_01665.pdb # # Length: 55 # Identity: 12/ 55 ( 21.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 55 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 55 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWV----QRPENYREALGDVVGDYNF 51 usage_00224.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWV----QRPENYREALGDVVGDYNF 51 usage_00389.pdb 1 PRDKYLEIMNNIFGKATQAEREAIIFQYTS-WEGNP--GYQNQQQIGRAVGD--- 49 usage_00633.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00634.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00635.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00770.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWV----QRPENYREALGDVVGDYNF 51 usage_00785.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00786.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00787.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_00972.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWV----QRPENYREALGDVVGDYNF 51 usage_01103.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_01136.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPEQYREALGDVVGDYNF 53 usage_01477.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_01478.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 usage_01562.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWV----QRPENYREALGDVVGDYNF 51 usage_01644.pdb 1 -RKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 52 usage_01665.pdb 1 TRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDD--QRPENYREALGDVVGDYNF 53 RkefqEglkifFpgvsefgkEsIlFhYTd v pe yrealGdvVGD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################