################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:36 2021 # Report_file: c_1471_50.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00173.pdb # 2: usage_00175.pdb # 3: usage_00176.pdb # 4: usage_00302.pdb # 5: usage_00303.pdb # 6: usage_00343.pdb # 7: usage_00872.pdb # 8: usage_00892.pdb # 9: usage_00893.pdb # 10: usage_00895.pdb # 11: usage_00896.pdb # 12: usage_00925.pdb # 13: usage_01030.pdb # 14: usage_01666.pdb # 15: usage_01692.pdb # 16: usage_01693.pdb # # Length: 30 # Identity: 1/ 30 ( 3.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 30 ( 56.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 30 ( 43.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00173.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_00175.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_00176.pdb 1 ------QYLRLKAQHP-----EILLFYR-- 17 usage_00302.pdb 1 ---TPQQYLRLKAQHP-----EILLFYR-- 20 usage_00303.pdb 1 -----QQYLRLKAQHP-----EILLFYR-- 18 usage_00343.pdb 1 -GA-HDYFEPLVKLYKDLDPQKRPVTLVNI 28 usage_00872.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYRMG 24 usage_00892.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_00893.pdb 1 -----QQYLRLKAQHP-----EILLFYR-- 18 usage_00895.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_00896.pdb 1 -----QQYLRLKAQHP-----EILLFYR-- 18 usage_00925.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_01030.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYRMG 24 usage_01666.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_01692.pdb 1 TPM-MQQYLRLKAQHP-----EILLFYR-- 22 usage_01693.pdb 1 ----MQQYLRLKAQHP-----EILLFYR-- 19 qylrLkaqhp eillfyr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################