################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:58:06 2021 # Report_file: c_0187_6.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00104.pdb # 6: usage_00105.pdb # 7: usage_00106.pdb # 8: usage_00107.pdb # 9: usage_00178.pdb # 10: usage_00179.pdb # 11: usage_00180.pdb # 12: usage_00181.pdb # 13: usage_00182.pdb # 14: usage_00183.pdb # 15: usage_00215.pdb # 16: usage_00216.pdb # 17: usage_00217.pdb # 18: usage_00218.pdb # # Length: 169 # Identity: 109/169 ( 64.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/169 ( 64.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/169 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 SCTTNCLAPLAKIVHDKFGIVEGLMTTVHAMT-ANQLTVDGPSKGGKDWRAGRSAGVNII 59 usage_00024.pdb 1 SCTTNCLAPLAKIVHDKFGIVEGLMTTVHAMT-ANQLTVDGPSKGGKDWRAGRSAGVNII 59 usage_00025.pdb 1 -------APLAKIVHDKFGIVEGLMTTVHAMT-ANQLTVDGPSKGGKDWRAGRSAGVNII 52 usage_00026.pdb 1 SCTTNCLAPLAKIVHDKFGIVEGLMTTVHAMT-ANQLTVDGPSKGGKDWRAGRSAGVNII 59 usage_00104.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTA--------------DWRAGRCAGNNII 46 usage_00105.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLTA--------------DWRAGRCAGNNII 39 usage_00106.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTA--------------DWRAGRCAGNNII 46 usage_00107.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLTA--------------DWRAGRCAGNNII 39 usage_00178.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 52 usage_00179.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 52 usage_00180.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 52 usage_00181.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 52 usage_00182.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSK-G-DWRAGRCAGNNII 57 usage_00183.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSK---DWRAGRCAGNNII 49 usage_00215.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 59 usage_00216.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 59 usage_00217.pdb 1 SCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 59 usage_00218.pdb 1 -------APLAKIINDKFGIVEGLMTTVHSLT-ANQLTVDGPSKGGKDWRAGRCAGNNII 52 APLAKI DKFGIVEGLMTTVH T DWRAGR AG NII usage_00023.pdb 60 PASTGAAKAVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCKLAKPAKYEDIVAAVKEAAT 119 usage_00024.pdb 60 PASTGAAKAVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCKLAKPAKYEDIVAAVKEAAT 119 usage_00025.pdb 53 PASTGAAKAVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCKLAKPAKYEDIVAAVKEAAT 112 usage_00026.pdb 60 PASTGAAKAVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCKLAKPAKYEDIVAAVKEAAT 119 usage_00104.pdb 47 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 106 usage_00105.pdb 40 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 99 usage_00106.pdb 47 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 106 usage_00107.pdb 40 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 99 usage_00178.pdb 53 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 112 usage_00179.pdb 53 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 112 usage_00180.pdb 53 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 112 usage_00181.pdb 53 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 112 usage_00182.pdb 58 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 117 usage_00183.pdb 50 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 109 usage_00215.pdb 60 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 119 usage_00216.pdb 60 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 119 usage_00217.pdb 60 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 119 usage_00218.pdb 53 PASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASN 112 PASTGAAKAVGK IP LNGKLTGMA RVP PDVSVVDLTCKLAKPA E I AVKEA usage_00023.pdb 120 SGPMKGIISYTDEEVVSSDFVHCKFSSVFDINAGIMLNDTFVKLVSW-- 166 usage_00024.pdb 120 SGPMKGIISYTDEEVVSSDFVHCKFSSVFDINAGIMLNDTFVKLVSW-- 166 usage_00025.pdb 113 SGPMKGIISYTDEEVVSSDFVHCKFSSVFDINAGIMLNDTFVKLVSW-- 159 usage_00026.pdb 120 SGPMKGIISYTDEEVVSSDFVHCKFSSVFDINAGIMLNDTFVKLVSW-- 166 usage_00104.pdb 107 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISW-- 152 usage_00105.pdb 100 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 147 usage_00106.pdb 107 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 154 usage_00107.pdb 100 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 147 usage_00178.pdb 113 GP-MKGIMGYTSDDVVSTDFIGCKYSSILDKNACIALNDSFVKLISW-- 158 usage_00179.pdb 113 GP-MKGIMGYTSDDVVSTDFIGCKYSSILDKNACIALNDSFVKLISW-- 158 usage_00180.pdb 113 GP-MKGIMGYTSDDVVSTDFIGCKYSSILDKNACIALNDSFVKLISW-- 158 usage_00181.pdb 113 GP-MKGIMGYTSDDVVSTDFIGCKYSSILDKNACIALNDSFVKLISWYD 160 usage_00182.pdb 118 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 165 usage_00183.pdb 110 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 157 usage_00215.pdb 120 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 167 usage_00216.pdb 120 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 167 usage_00217.pdb 120 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 167 usage_00218.pdb 113 GP-MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 160 MKGI YT VVS DF CK SS D NA I LND FVKL SW #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################