################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:21:54 2021 # Report_file: c_0256_1.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00009.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00014.pdb # 11: usage_00015.pdb # 12: usage_00016.pdb # 13: usage_00017.pdb # 14: usage_00018.pdb # 15: usage_00019.pdb # 16: usage_00022.pdb # 17: usage_00023.pdb # 18: usage_00024.pdb # 19: usage_00032.pdb # 20: usage_00034.pdb # # Length: 130 # Identity: 36/130 ( 27.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/130 ( 46.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/130 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 D-VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 59 usage_00002.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00003.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00004.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 usage_00005.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00009.pdb 1 D-VAQEINDALDEGSLVLVEGTQGFGLSLYYGTYPYVTSKDVTASSVAADVGIGPTRVDE 59 usage_00011.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00012.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 usage_00013.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00014.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 usage_00015.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00016.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00017.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00018.pdb 1 --TSVVLNDALDNNHRVLFEGAQG-VLDIDHGTYPFVTSSNPIAGGVTVGTGVGPAKVTR 57 usage_00019.pdb 1 --TSVVLNDALDNNHRVLFEGAQG-VLDIDHGTYPFVTSSNPIAGGVTVGTGVGPAKVTR 57 usage_00022.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 usage_00023.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 usage_00024.pdb 1 --VSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 58 usage_00032.pdb 1 -T--TRLWKALDEDKRVLLEGAQG-SLDIDHGTYPYVTSSSTISAGTLTGLGLNPKEAGN 56 usage_00034.pdb 1 ---SDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDY 57 l A V EGaQG LdidhGTYP VTSs a gv g G gP v usage_00001.pdb 60 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 119 usage_00002.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00003.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00004.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGLRRRTGWLDTVAVRRAVQL 117 usage_00005.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00009.pdb 60 VIVVFKSFPTRVGAGPFPTEMPMEEADRLG--LVEYGTVTGRRRRVGWFDFEMARYSARI 117 usage_00011.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00012.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 117 usage_00013.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00014.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 117 usage_00015.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00016.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00017.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00018.pdb 58 VVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGREYGTTTGRPRRVGWFDSVVVRHARRV 117 usage_00019.pdb 58 VVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGREYGTTTGRPRRVGWFDSVVVRHARRV 117 usage_00022.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 117 usage_00023.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 117 usage_00024.pdb 59 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 118 usage_00032.pdb 57 IIGIVKAYATRVGNGAFPTEDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARL 116 usage_00034.pdb 58 VLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQL 117 v g Kay RVG GpFPTE E g g E G TGr RR GW D v vR usage_00001.pdb 120 NSLSGFCLTK 129 usage_00002.pdb 119 NSLSGFCLTK 128 usage_00003.pdb 119 NSLSGFCLTK 128 usage_00004.pdb 118 NSLSGFCLTK 127 usage_00005.pdb 119 NSLSGFCLTK 128 usage_00009.pdb 118 NGATMLAVTM 127 usage_00011.pdb 119 NSLSGFCLTK 128 usage_00012.pdb 118 NSLSGFCLTK 127 usage_00013.pdb 119 NSLSGFCLTK 128 usage_00014.pdb 118 NSLSGFCLTK 127 usage_00015.pdb 119 NSLSGFCLTK 128 usage_00016.pdb 119 NSLSGFCLTK 128 usage_00017.pdb 119 NSLSGFCLTK 128 usage_00018.pdb 118 SGLTDLSLNS 127 usage_00019.pdb 118 SGLTDLSLNS 127 usage_00022.pdb 118 NSLSGFCLTK 127 usage_00023.pdb 118 NSLSGFCLTK 127 usage_00024.pdb 119 NSLSGFCLTK 128 usage_00032.pdb 117 NGLDALSLK- 125 usage_00034.pdb 118 NSLSGFCLTK 127 l l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################