################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:30:24 2021 # Report_file: c_1055_79.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00198.pdb # 2: usage_00313.pdb # 3: usage_00314.pdb # 4: usage_00316.pdb # 5: usage_00317.pdb # 6: usage_00318.pdb # 7: usage_00319.pdb # 8: usage_00320.pdb # 9: usage_00350.pdb # 10: usage_00407.pdb # 11: usage_00408.pdb # 12: usage_00409.pdb # 13: usage_00410.pdb # 14: usage_00411.pdb # 15: usage_00412.pdb # 16: usage_00413.pdb # 17: usage_00548.pdb # 18: usage_00549.pdb # 19: usage_00550.pdb # 20: usage_00702.pdb # # Length: 60 # Identity: 9/ 60 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 60 ( 45.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 60 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00198.pdb 1 SASKMLSKFRKIIKEEIKNIE--DTGVTVERKRRGSPAVTLLISKPKEISVDIILALESK 58 usage_00313.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00314.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00316.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00317.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00318.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00319.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00320.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00350.pdb 1 SASKMLSKFRKIIKEEINDIK--DTDVIMKRKRGGSPAVTLLIS--EKISVDITLALESK 56 usage_00407.pdb 1 ---SKLSKFRKIIKEEINDIK--DTDVIK-RKRGGSPAVTLLIS--EKISVDITLALESK 52 usage_00408.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00409.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00410.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00411.pdb 1 --TKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 56 usage_00412.pdb 1 ---KMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 55 usage_00413.pdb 1 SATKMLSKFRKIIKEEVKEIK--DIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESK 58 usage_00548.pdb 1 SASKMLSKFRKIIKEEINDIK--DTDVIMKRKRGGSPAVTLLIS--EKISVDITLALESK 56 usage_00549.pdb 1 SASKMLSKFRKIIKEEINDIK--DTDVIMKRKRGGSPAVTLLIS--EKISVDITLALESK 56 usage_00550.pdb 1 SASKMLSKFRKIIKEEINDIK--DTDVIMKRKRGGSPAVTLLIS--EKISVDITLALESK 56 usage_00702.pdb 1 SARKIRSRFQTLVAQAVDKCSYRD-VVKMVADT---SEVKLRIR--DRYVVQIT------ 48 k lSkFrkiikee i D V paVtLlI isVdI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################