################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:10 2021 # Report_file: c_1135_83.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00171.pdb # 2: usage_00483.pdb # 3: usage_00629.pdb # 4: usage_00677.pdb # 5: usage_00679.pdb # 6: usage_00681.pdb # # Length: 68 # Identity: 5/ 68 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 68 ( 32.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 68 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 -LPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFA 58 usage_00483.pdb 1 -LPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFA 58 usage_00629.pdb 1 IIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE-DLEALVMPTLRQAAEDKSWRVRYMV 59 usage_00677.pdb 1 -VPLVKRLAGGDWFTSRTSACGLFSVCYPRV-S-SAVKAELRQYFRNLCSDDTPMVRRAA 57 usage_00679.pdb 1 -LPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFA 58 usage_00681.pdb 1 -LPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFA 58 P v r Agd vR i p l l ev p l l D V y a usage_00171.pdb 59 QEALTVLS 66 usage_00483.pdb 59 QEALTVL- 65 usage_00629.pdb 60 ADKF---- 63 usage_00677.pdb 58 ASKL---- 61 usage_00679.pdb 59 QEALTVLS 66 usage_00681.pdb 59 QEALTVLS 66 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################