################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:30 2021 # Report_file: c_0842_49.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00519.pdb # 2: usage_00520.pdb # 3: usage_00521.pdb # 4: usage_00522.pdb # 5: usage_00684.pdb # 6: usage_00685.pdb # 7: usage_00686.pdb # 8: usage_00687.pdb # 9: usage_00883.pdb # 10: usage_00884.pdb # # Length: 76 # Identity: 60/ 76 ( 78.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 76 ( 78.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 76 ( 21.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00519.pdb 1 -PVSFMHVFNSAISVVKQGS---R-RRGALMGILNINHPDIEEFIDAKK--VLNFFNLSV 53 usage_00520.pdb 1 GPVSFMHVFNSAISVVK-----------ALMGILNINHPDIEEFIDAKK--VLNFFNLSV 47 usage_00521.pdb 1 GPVSFMHVFNSAISVVK-------Q---ALMGILNINHPDIEEFIDAKKENVLNFFNLSV 50 usage_00522.pdb 1 -PVSFMHVFNSAISVVK-------Q---ALMGILNINHPDIEEFIDAKKEAVLNFFNLSV 49 usage_00684.pdb 1 -PVSFMHVFNSAISVV------------ALMGILNINHPDIEEFIDAKK--VLNFFNLSV 45 usage_00685.pdb 1 -PVSFMHVFNSAISVVKQGS-RRG----ALMGILNINHPDIEEFIDAKK--VLNFFNLSV 52 usage_00686.pdb 1 -PVSFMHVFNSAISVVKQGSRRRG----ALMGILNINHPDIEEFIDAKK--VLNFFNLSV 53 usage_00687.pdb 1 -PVSFMHVFNSAISVVKQGS---R-RRGALMGILNINHPDIEEFIDAK---VLNFFNLSV 52 usage_00883.pdb 1 -PVSFMHVFNSAISVVKQG----G----ALMGILNINHPDIEEFIDAKK--VLNFFNLSV 49 usage_00884.pdb 1 -PVSFMHVFNSAISVVKQG----G----ALMGILNINHPDIEEFIDAKKENVLNFFNLSV 51 PVSFMHVFNSAISVV ALMGILNINHPDIEEFIDAK VLNFFNLSV usage_00519.pdb 54 GFPMDKKEILKLYEED 69 usage_00520.pdb 48 GFPMDKKEILKLYEED 63 usage_00521.pdb 51 GFPMDKKEILKLYEED 66 usage_00522.pdb 50 GFPMDKKEILKLYEED 65 usage_00684.pdb 46 GFPMDKKEILKLYEED 61 usage_00685.pdb 53 GFPMDKKEILKLYEED 68 usage_00686.pdb 54 GFPMDKKEILKLYEED 69 usage_00687.pdb 53 GFPMDKKEILKLYEED 68 usage_00883.pdb 50 GFPMDKKEILKLYEED 65 usage_00884.pdb 52 GFPMDKKEILKLYEED 67 GFPMDKKEILKLYEED #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################