################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:41:06 2021 # Report_file: c_1415_99.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00036.pdb # 2: usage_00037.pdb # 3: usage_00039.pdb # 4: usage_00046.pdb # 5: usage_00180.pdb # 6: usage_00503.pdb # 7: usage_00504.pdb # 8: usage_00505.pdb # 9: usage_00506.pdb # 10: usage_00507.pdb # 11: usage_00508.pdb # 12: usage_00509.pdb # 13: usage_00510.pdb # 14: usage_00511.pdb # 15: usage_00512.pdb # 16: usage_00513.pdb # 17: usage_00514.pdb # 18: usage_00515.pdb # 19: usage_00516.pdb # 20: usage_00517.pdb # 21: usage_00518.pdb # # Length: 49 # Identity: 1/ 49 ( 2.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 49 ( 63.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 49 ( 36.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAVV 40 usage_00037.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAVV 40 usage_00039.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAVV 40 usage_00046.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAVV 40 usage_00180.pdb 1 ------LHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDV--- 40 usage_00503.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00504.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00505.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00506.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00507.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00508.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00509.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00510.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00511.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00512.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00513.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00514.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00515.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00516.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00517.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 usage_00518.pdb 1 GAQDKEILTKIAMTSITGKG----AEK-----AKEKLAEIIVEAVSAV- 39 iltkiamtSitgkg aek akeklaeiiveavs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################