################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:24:11 2021 # Report_file: c_0147_25.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00054.pdb # 2: usage_00055.pdb # 3: usage_00098.pdb # 4: usage_00114.pdb # 5: usage_00120.pdb # 6: usage_00128.pdb # 7: usage_00137.pdb # 8: usage_00171.pdb # 9: usage_00182.pdb # 10: usage_00184.pdb # 11: usage_00233.pdb # 12: usage_00315.pdb # 13: usage_00353.pdb # 14: usage_00375.pdb # 15: usage_00396.pdb # 16: usage_00397.pdb # 17: usage_00398.pdb # 18: usage_00429.pdb # 19: usage_00430.pdb # 20: usage_00586.pdb # 21: usage_00597.pdb # 22: usage_00598.pdb # 23: usage_00599.pdb # 24: usage_00600.pdb # 25: usage_00616.pdb # 26: usage_00619.pdb # 27: usage_00628.pdb # 28: usage_00635.pdb # 29: usage_00662.pdb # 30: usage_00699.pdb # 31: usage_00727.pdb # 32: usage_00728.pdb # # Length: 150 # Identity: 26/150 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/150 ( 20.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/150 ( 32.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 EVQLQESGPGLVKPSETLSLTCTVSGDSI-TS--GYWNWIRQPPGRALEWMGYISY---- 53 usage_00055.pdb 1 EVQLQESGPGLVKPSETLSLTCTVSGDSI-TS--GYWNWIRQPPGRALEWMGYISY---- 53 usage_00098.pdb 1 EVQLQQWGAGLLKPSETLSLTCAVYGGSF-SD--YYWSWIRQPPGKGLEWIGEINH---- 53 usage_00114.pdb 1 --QLQESGPSLVKPSQTLSLTCSVTGDSI-TS--DAWSWIRKFPGNRLEYMGYVSA---- 51 usage_00120.pdb 1 --QLQESGPGLVKPSQTLSLSCTVSGGSS-SSGAHYWSWIRQYPGKGLEWIGYIHY---- 53 usage_00128.pdb 1 EVQLQQWGAGLLKPSETLSLTCAVYGGSF-SD--YYWSWIRQPPGKGLEWIGEINH---- 53 usage_00137.pdb 1 --QLQESGPGLVEASETLSLTCTVSGDST-GRCNYFWGWVRQPPGKGLEWIGSLSH-CRS 56 usage_00171.pdb 1 QVQLQESGPGLMKPSETLSLTCSVSGDSI-RS--DYWSWIRQPPGKGLEYIGYVSY---- 53 usage_00182.pdb 1 QVQLQQSGPGLVKPSQTLSLTCAISGDSV-SSNSAAWGWIRQSPGRGLEWLGIIQK-R-- 56 usage_00184.pdb 1 QVQLQQSGPGLVKPSQTLSLTCAISGDSV-SSNSAAWGWIRQSPGRGLEWLGIIQK-R-- 56 usage_00233.pdb 1 EVQLVESGPGLVKPSETLSLSCTVSGDSI-TS--GFWNWIRQPPGKGLEWIGYIGF---- 53 usage_00315.pdb 1 --QLQESGPGLVKPSQTLSLTCTVSGASI-SSGGYNWSWIRQHPGKGLEWIGYIYY---- 53 usage_00353.pdb 1 QVQLQESGPGLVKPSETLSLICTVSGGSISSSS-YYWGWIRQTPERNLEWIGIIYF---- 55 usage_00375.pdb 1 QIQLQESGPGLVTPSQSLTLTCSVTGDSI-TS--YHWSWIRQFPGKKLEWMGYIYN---- 53 usage_00396.pdb 1 -VQLQESGPGLVKPSQTLSLTCTVSGGSI-SSGDYYWSWIRQPPGKGLEWIGYIYY---- 54 usage_00397.pdb 1 QVQLQESGPGLVKPSQTLSLTCTVSGGSI-SSGDYYWSWIRQPPGKGLEWIGYIYY---- 55 usage_00398.pdb 1 -VQLQESGPGVVKSSETLSLTCTVSGGSM-GG--TYWSWLRLSPGKGLEWIGYIFH---- 52 usage_00429.pdb 1 --QLQESGPGLVKPSDTLSLTCTVSGGSL-SS--FYWSWIRQPPGKGLEWIGYIYY---- 51 usage_00430.pdb 1 QVQLQESGPGLVKPSDTLSLTCTVSGGSL-SS--FYWSWIRQPPGKGLEWIGYIYY---- 53 usage_00586.pdb 1 --QLQQSGPGLVKPSQTLSLTCAISGDSV-SSYNAVWNWIRQSPSRGLEWLGRTYY-R-- 54 usage_00597.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSV-SSGDYYWTWIRQSPGKGLEWIGHIYY---- 55 usage_00598.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSV-SSGDYYWTWIRQSPGKGLEWIGHIYY---- 55 usage_00599.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSV-SSGDYYWTWIRQSPGKGLEWIGHIYY---- 55 usage_00600.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGGSV-SSGDYYWTWIRQSPGKGLEWIGHIYY---- 55 usage_00616.pdb 1 -VQLEQSGPGLVRPSQTLSLTCTVSGTSF-DD--YYWTWVRQPPGRGLEWIGYVFY---- 52 usage_00619.pdb 1 -VQLLESGPGVVKPSETLSLTCTVSGASV-NN--YYWTWVRQPPGKGLEWIGNVYD---- 52 usage_00628.pdb 1 -VQLQESGPGLVRPSQTLSLTCTVSGFSL-TG--YGVNWVRQPPGRGLEWIGMIWG---- 52 usage_00635.pdb 1 -VQLQESGPGLVRPSQTLSLTCTVSGFTF-TD--FYMNWVRQPPGRGLEWIGFIRDKA-- 54 usage_00662.pdb 1 -LQLQESGPGLLKPSETLSLTCAVSGGSI-SGG-YGWGWIRQPPGKGLEWIGSIYS-S-- 54 usage_00699.pdb 1 QVQLQESGPGLVKPSETLSLTCTVSGASI-SS--YYWSWIRQPPGKGLEWIGYIGG---- 53 usage_00727.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSI-TSD-YAWNWLRQLPGNKLEWMGYISY---- 53 usage_00728.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSI-TSD-YAWNWLRQLPGNKLEWMGYISY---- 53 QL G g S LsL C G s W R P LE G usage_00054.pdb 54 ---SGSTYYSLSLRSRITISRDTSKNQYSLRLSSVTAADTAMYYCALIT-------T--- 100 usage_00055.pdb 54 ---SGSTYYSLSLRSRITISRDTSKNQYSLRLSSVTAADTAMYYCALIT-------T--- 100 usage_00098.pdb 54 ---SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPP-------HDTS 103 usage_00114.pdb 52 ---SGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWD----------- 97 usage_00120.pdb 54 ---SGNTYYNPSLKSRITISQHTSENQFSLKLNSVTVADTAVYYCARGT-------R--- 100 usage_00128.pdb 54 ---SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPP-------HDTS 103 usage_00137.pdb 57 YYNTDWTYHNPSLKSRLTISLDTPKNQVFLRLTSVTAADTATYYCARFG-------G--- 106 usage_00171.pdb 54 ---SGSTYYNPSLKSRVTISVDTSKNRFSLKLNSVTAADTAVYYCARWD----------- 99 usage_00182.pdb 57 --SKWYNNYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARYS-------Y--- 104 usage_00184.pdb 57 --SKWYNNYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARYS-------Y--- 104 usage_00233.pdb 54 ---SGSTYYNPSLKSRVTISRDTSKNQYSLKLSSVTAADTAVYYCASVD-------N--- 100 usage_00315.pdb 54 ---SGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARER-------G--- 100 usage_00353.pdb 56 ---SGTTYYNPSLQSRVSMSLDRSTNRFSLRLSSVTAADTAIYYCAKPK-------S--- 102 usage_00375.pdb 54 ---SGGTDYNPSLKSRVSITREISRNQLFLQLNSVTTEDTATYYCARRD-------Y--- 100 usage_00396.pdb 55 ---SGSTDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVS-------I--- 101 usage_00397.pdb 56 ---SGSTDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVS-------I--- 102 usage_00398.pdb 53 ---TGHTNYNPSLEGRVSISVDTSEDQFSLRLRSVTAADTAVYFCASLP-------R--- 99 usage_00429.pdb 52 ---SGSPNYSPSLESRVTMSVDTTRNQISLKLDSVTAADTAVYYCVRAS-------R--- 98 usage_00430.pdb 54 ---SGSPNYSPSLESRVTMSVDTTRNQISLKLDSVTAADTAVYYCVRAS-------R--- 100 usage_00586.pdb 55 --SGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVN--- 109 usage_00597.pdb 56 ---SGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDR-------V--- 102 usage_00598.pdb 56 ---SGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDR-------V--- 102 usage_00599.pdb 56 ---SGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDR-------V--- 102 usage_00600.pdb 56 ---SGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDR-------V--- 102 usage_00616.pdb 53 ---TGTTLLDPSLRGRVTMLVNTSKNQFSLRLSSVTAADTAVYYCARNL-------I--- 99 usage_00619.pdb 53 ---SGDTNYNPSLSSRLSLSMDTSKNQFSLRLSSVTAADTATYYCARYH-------R--- 99 usage_00628.pdb 53 ---DGNTDYNSALKSRVTMLKDTSKNQFSLRLSSVTAADTAVYYCARER-------D--- 99 usage_00635.pdb 55 --KGYTTEYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREG-------H--- 102 usage_00662.pdb 55 ---SGSTDYNPSLKSRVTISTDTSKNQLSLKLSSVTAADTAVYYCARVQ-------N--- 101 usage_00699.pdb 54 ---EGSTNYNPSLKSRVTISVDTSKNQFSLKLRSVTAADTAVYYCARER-------L--- 100 usage_00727.pdb 54 ---SGRIRYNPSLKRRISITRDTSKNQFFLQLNSVTTEDTATYYCARSD-------Y--- 100 usage_00728.pdb 54 ---SGRIRYNPSLKRRISITRDTSKNQFFLQLNSVTTEDTATYYCARSD-------Y--- 100 s R L SVT DTA YyC usage_00054.pdb 101 S-----------T-YAMDYWGQGTTVTV-- 116 usage_00055.pdb 101 S-----------T-YAMDYWGQGTTVTV-- 116 usage_00098.pdb 104 G-------------HYWNYWGQGTLVTVS- 119 usage_00114.pdb 98 ----------------GDYWGQGTLVT--- 108 usage_00120.pdb 101 L--R-T-L----R-NAFDIWGQGTMVTV-- 119 usage_00128.pdb 104 G-------------HYWNYWGQGTLVTVS- 119 usage_00137.pdb 107 EVLVYRDWPK--P-AWVDLWGRGTLVTVS- 132 usage_00171.pdb 100 ----------------GDYWGQGILVTVSS 113 usage_00182.pdb 105 P-----------F-YSIDYWGQGTLVT--- 119 usage_00184.pdb 105 P-----------F-YSIDYWGQGTLVTV-- 120 usage_00233.pdb 101 S-------------AALDYWGQGTLVTV-- 115 usage_00315.pdb 101 Y--CSSTS-C--S-RVMDVWG--------- 115 usage_00353.pdb 103 R---DRGG-PGDDYFGMDVWGQGIMVTV-- 126 usage_00375.pdb 101 G-----------T-YYFDYWGQGTMVTVS- 117 usage_00396.pdb 102 FG----------V-GTFDYWGQGTLVTVS- 119 usage_00397.pdb 103 FG----------V-GTFDYWGQGTLVTVS- 120 usage_00398.pdb 100 GQL----V----N-AYFRNWGRGTLVSV-- 118 usage_00429.pdb 99 S--YYWGSYR--P-TAFDSWGQGTLVTV-- 121 usage_00430.pdb 101 S--YYWGSYR--P-TAFDSWGQGTLVTV-- 123 usage_00586.pdb 110 ------------V-DAFDMWGQGTMVT--- 123 usage_00597.pdb 103 T-------------GAFDIWGQGTMVTV-- 117 usage_00598.pdb 103 T-------------GAFDIWGQGTMVTV-- 117 usage_00599.pdb 103 T-------------GAFDIWGQGTMVTV-- 117 usage_00600.pdb 103 T-------------GAFDIWGQGTMVTV-- 117 usage_00616.pdb 100 A-------------GGIDVWGQGSLVTVS- 115 usage_00619.pdb 100 H--FI-R--G--P-LSFDYWGRGTLVTV-- 119 usage_00628.pdb 100 --------------YRLDYWGQGSLVTVS- 114 usage_00635.pdb 103 T-----------A-APFDYWGQGSLVTV-- 118 usage_00662.pdb 102 I--VVVFT-I--K-EFFELWGQGALVT--- 122 usage_00699.pdb 101 --------------GIGDYWGQGTLVTVS- 115 usage_00727.pdb 101 GN----------Y-GRGDYWGQGTSVTVS- 118 usage_00728.pdb 101 GN----------Y-GRGDYWGQGTSVTVS- 118 WG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################