################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:40 2021 # Report_file: c_1343_37.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00049.pdb # 2: usage_00079.pdb # 3: usage_00133.pdb # 4: usage_00134.pdb # 5: usage_00336.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 56 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 56 ( 60.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 EFEERLKAVIQEVVQSQ-G-EVILFI--D----ELHTVVGAVDAGNMLKPALAR-G 47 usage_00079.pdb 1 -----TNSLLVAVIGGS-I-DATSSVSL-------------------TFDQGRS-- 28 usage_00133.pdb 1 EFEERLKAVIQEVVQSQ-G-EVILFI--D----E-------------LKPALAR-G 34 usage_00134.pdb 1 EFEERLKAVIQEVVQSQ-G-EVILFI--D----E-------------LKPALAR-G 34 usage_00336.pdb 1 ---------AEVISKLANAGIVVSAG--HSNAT-LK-----------EAKAGFRAG 33 v v a r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################