################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:06:32 2021 # Report_file: c_0174_10.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00258.pdb # 2: usage_00259.pdb # 3: usage_00260.pdb # 4: usage_00261.pdb # 5: usage_00262.pdb # 6: usage_00327.pdb # 7: usage_00414.pdb # 8: usage_00456.pdb # 9: usage_00490.pdb # # Length: 228 # Identity: 45/228 ( 19.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 83/228 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/228 ( 14.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00258.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00259.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00260.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00261.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00262.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00327.pdb 1 NSITAENAMKPQPTEPKKGEFNWEDADKIADFCRANGIKMRGHTLMWHSQIGSWMYQ--- 57 usage_00414.pdb 1 NSITAGNFMKMDAMQPTEGKFVWSEADKLVNFAAANNMQVRGHTLLWHSQVPDWFFTDPN 60 usage_00456.pdb 1 NMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDPS 60 usage_00490.pdb 1 NILTPENQMKWDTIHPERDRYNFTPAEKHVEFAEENNMIVHGHTLVWHNQLPGWITG--- 57 N aeN MK P g f AdK v a a nm rGHTL WH Q p W usage_00258.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNAVLDDN------GNLRN 114 usage_00259.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNAVLDDN------GNLRN 114 usage_00260.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDN------GNLRN 114 usage_00261.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDN------GNLRN 114 usage_00262.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDN------GNLRN 114 usage_00327.pdb 58 -KGNLLSKEEFYANMKHHIQAIVNRYK------DVVYCWDVVNEAVADSPVYPGRPELRN 110 usage_00414.pdb 61 DPSKPATREQLMQRMKTHIQTIVSRYK------GKVHTWDVVNEVISDG------GGLRN 108 usage_00456.pdb 61 DPSKPASRDLLLQRLRTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDN------GNLRN 114 usage_00490.pdb 58 ---REWTKEELLNVLEDHIKTVVSHFK------GRVKIWDVVNEAVSDS------GTYRE 102 l HI t K WDVVN D g lRn usage_00258.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00259.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00260.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00261.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00262.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00327.pdb 111 ----SPMYQIAG-------E-EFIYKAFEYAHEADPDALLFYNDYNDAEPA-KSQRIYNL 157 usage_00414.pdb 109 QASGSKWRDIIGDVDGDGDDSDYIELAFRYAREADPDAVLVINDYGIEGSVSKMNDMVKL 168 usage_00456.pdb 115 ----SKWLQIIG-------P-DYIEKAFEYAHEADPSMKLFINDYNIENNGVKTQAMYDL 162 usage_00490.pdb 103 ----SVWYKTIG-------P-EYIEKAFRWTKEADPDAILIYNDYSIEEINAKSNFVYNM 150 S w iiG yIekAF ya EADP L NDY ie K y l usage_00258.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00259.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00260.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00261.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00262.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00327.pdb 158 VKRMKDAGVPIDGIGMQAHYNVYGPTMKEVDDAIKLYSTVV-DHIHL- 203 usage_00414.pdb 169 VEKLLAKGTPIDAIGFQMHVSMYG-PDIKQIREAFNRAAALGVHIQV- 214 usage_00456.pdb 163 VKKLKNEGVPINGIGMQMHISINS-NIDNIKASIEKLASLG-VEIQV- 207 usage_00490.pdb 151 IKELKEKGVPVDGIGFQMHIDYRG-LNYDSFRRNLERFAKL-GLQIYI 196 vk lk GvPi gIG QmH i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################