################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:43 2021 # Report_file: c_0238_9.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00006.pdb # 2: usage_00007.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00047.pdb # 6: usage_00064.pdb # 7: usage_00065.pdb # 8: usage_00066.pdb # # Length: 132 # Identity: 43/132 ( 32.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/132 ( 34.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/132 ( 22.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 IQEVEYVKEEAKMVYLLECLQKTP--PPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK 58 usage_00007.pdb 1 IQEVEYVKEEAKMVYLLECLQKTP--PPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK 58 usage_00045.pdb 1 TQKVVWVEESDKRSFLLDLLNATK-DSLTLVFVETKKGADSLEDFLYHEGYACTSIH--- 56 usage_00046.pdb 1 TQKVVWVEESDKRSFLLDLLNATG--SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 58 usage_00047.pdb 1 TQKVVWVEESDKRSFLLDLLNTG---SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 57 usage_00064.pdb 1 TQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIH--- 57 usage_00065.pdb 1 TQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 60 usage_00066.pdb 1 TQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 60 Q V V E K LL L t L F E K D L G IH usage_00006.pdb 59 DQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGCT 118 usage_00007.pdb 59 DQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGCS 118 usage_00045.pdb 57 -----EEALHQFRSGKSPILVAT-A-----DISNVKHVINFDLPSDIEEYVHRIGRTGRV 105 usage_00046.pdb 59 SQRDREEALHQFRSGKSPILVATAVA-----ISNVKHVINFDLPSDIEEYVHRIGRTGRV 113 usage_00047.pdb 58 S---REEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV 114 usage_00064.pdb 58 -----EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV 112 usage_00065.pdb 61 SQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV 120 usage_00066.pdb 61 SQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV 120 A FR GK LVAT v HVIN D P IE YVHRIGRTG usage_00006.pdb 119 ---GIATTF--- 124 usage_00007.pdb 119 --TGIATTF--- 125 usage_00045.pdb 106 GNLGLATSFFNE 117 usage_00046.pdb 114 GNLGLATSFFNE 125 usage_00047.pdb 115 GNLGLATSFFNE 126 usage_00064.pdb ------------ usage_00065.pdb ------------ usage_00066.pdb ------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################