################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:54 2021 # Report_file: c_0609_2.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00163.pdb # 2: usage_00168.pdb # 3: usage_00699.pdb # 4: usage_00700.pdb # # Length: 122 # Identity: 104/122 ( 85.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 105/122 ( 86.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/122 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00163.pdb 1 LGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGMA----QRSQRRFVDADPRQTVGALV 56 usage_00168.pdb 1 LGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGM-AGTDQRSQRRFVDADPRQTVGALV 59 usage_00699.pdb 1 LGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGM-AGTDQRSQRRFVDADPRQTVGALV 59 usage_00700.pdb 1 LGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGM-AGTDQRSQRRFVDADPRQTVGALV 59 LGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGM QRSQRRFVDADPRQTVGALV usage_00163.pdb 57 AIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAG-V---ADH-PGDPWTVPKFY 111 usage_00168.pdb 60 AIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAG-V------GPGDPWTVPKFY 112 usage_00699.pdb 60 AIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAGVGSGTADH-PGDPWTVPKFY 118 usage_00700.pdb 60 AIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAG-V------G--DPWTVPKFY 110 AIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAG v DPWTVPKFY usage_00163.pdb 112 -W 112 usage_00168.pdb 113 W- 113 usage_00699.pdb 119 -W 119 usage_00700.pdb 111 -W 111 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################