################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:59:07 2021 # Report_file: c_1401_15.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00104.pdb # 2: usage_00487.pdb # 3: usage_00505.pdb # 4: usage_00506.pdb # 5: usage_00507.pdb # 6: usage_00508.pdb # 7: usage_00509.pdb # 8: usage_00510.pdb # # Length: 68 # Identity: 1/ 68 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 68 ( 20.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 68 ( 57.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 TLSQLIPFMQG---KERSERKAASEAYYGFLA-----------ENEEELDRIYDELVKVR 46 usage_00487.pdb 1 -DLPDFLTWRATKDETR---------SLCSTVCKWTYLGHEDRWDPSYFKLVG------- 43 usage_00505.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 usage_00506.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 usage_00507.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 usage_00508.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 usage_00509.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 usage_00510.pdb 1 TLAQLQPFVES---PDRDMRKRASEARFTFFQ-----------EHEEKFDEIYDQLVKVR 46 l ql pf R f e ee fd iy usage_00104.pdb 47 TKIAKSLG 54 usage_00487.pdb -------- usage_00505.pdb 47 TAIAQKLG 54 usage_00506.pdb 47 TAIAQKLG 54 usage_00507.pdb 47 TAIAQKLG 54 usage_00508.pdb 47 TAIAQKLG 54 usage_00509.pdb 47 TAIAQKLG 54 usage_00510.pdb 47 TAIAQKLG 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################