################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:27 2021 # Report_file: c_0378_73.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00015.pdb # 2: usage_00323.pdb # 3: usage_00582.pdb # 4: usage_00877.pdb # 5: usage_00879.pdb # # Length: 88 # Identity: 17/ 88 ( 19.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 88 ( 42.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 88 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANHSHS 59 usage_00323.pdb 1 --------RVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHN 52 usage_00582.pdb 1 --------WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDS 52 usage_00877.pdb 1 WLLLQVSSRVLTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNMSHS 60 usage_00879.pdb 1 WLLLQVSSRVLTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNMSHS 60 v Egep LRCH WKdk V y NGK Kffh ns I k n shs usage_00015.pdb 60 GDYHCTGNIGYTLFSSKPVT--IT---- 81 usage_00323.pdb 53 GTYHCSGMGK--HRYTSAGISVTVKELF 78 usage_00582.pdb 53 GSYFCRGLFG--SKNVSSETVQITITQ- 77 usage_00877.pdb 61 GTYHCSGMGK--HRYTSAGIS-VT---- 81 usage_00879.pdb 61 GTYHCSGMGK--HRYTSAGIS-VT---- 81 G YhC G s t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################