################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:11 2021 # Report_file: c_1153_63.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00105.pdb # 2: usage_00106.pdb # 3: usage_00444.pdb # 4: usage_00753.pdb # 5: usage_00755.pdb # 6: usage_00793.pdb # 7: usage_00853.pdb # 8: usage_01831.pdb # 9: usage_02486.pdb # # Length: 46 # Identity: 0/ 46 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 46 ( 23.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 46 ( 71.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00105.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQHDEVKCD--------------- 28 usage_00106.pdb 1 ---VFKFEKVSHSNIHVYKLLYC--DEE-----------DVKCD-- 28 usage_00444.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQHDEE-----------DVKCD-- 30 usage_00753.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQHDEE-----------DVKCD-- 30 usage_00755.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQHDEE-----------DVKCD-- 30 usage_00793.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQHDEE-----------DVKCD-- 30 usage_00853.pdb 1 ---PFKFEQVS-DQLHSYKLLYCEGK-----HEKCASIG------- 30 usage_01831.pdb 1 NQYYLFSHSN-------GHYYDSK---------------AQE--VA 22 usage_02486.pdb 1 ---VFKFEKVSHSNIHVYKLLYCQRDDE-----------DVKCD-- 30 fkfe v ykllyc #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################