################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:22:51 2021 # Report_file: c_1200_226.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00472.pdb # 2: usage_00476.pdb # 3: usage_00592.pdb # 4: usage_00973.pdb # 5: usage_01004.pdb # 6: usage_01256.pdb # 7: usage_01257.pdb # 8: usage_01564.pdb # 9: usage_01939.pdb # 10: usage_02141.pdb # 11: usage_02164.pdb # 12: usage_02527.pdb # 13: usage_02566.pdb # 14: usage_04191.pdb # 15: usage_04192.pdb # 16: usage_04193.pdb # 17: usage_04440.pdb # 18: usage_04613.pdb # 19: usage_04645.pdb # 20: usage_04646.pdb # 21: usage_04962.pdb # 22: usage_04991.pdb # 23: usage_05153.pdb # 24: usage_05161.pdb # # Length: 36 # Identity: 2/ 36 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 36 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 36 ( 47.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00472.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR----- 26 usage_00476.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKKIR----- 27 usage_00592.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIRLDT-- 29 usage_00973.pdb 1 --EKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEE 34 usage_01004.pdb 1 ----IGSGSFGKVYKGRCR--NKIVAIKRYR----- 25 usage_01256.pdb 1 EIELIGSGGFGQVFKAKHRIDGKTYVIRRVK----- 31 usage_01257.pdb 1 EIELIGSGGFGQVFKAKHRIDGKTYVIRRVK----- 31 usage_01564.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR----- 26 usage_01939.pdb 1 -LDFLGEGQFATVYKARDKNTNQIVAIKKI------ 29 usage_02141.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR----- 26 usage_02164.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKK------- 24 usage_02527.pdb 1 -KD-IGSGNFGVARLMRDKQSNELVAVKYIE----- 29 usage_02566.pdb 1 ----IGKGSFGEVFKGIDNRTQKVVAIKIID----- 27 usage_04191.pdb 1 --EKIGEGTYGVVYKARNKLTGEVVALKKIR----- 29 usage_04192.pdb 1 --EKIGEGTYGVVYKARNKLTGEVVALKKIR----- 29 usage_04193.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR----- 26 usage_04440.pdb 1 -ISELGAG---VVFKVSHKPSGLVMARKLIH----- 27 usage_04613.pdb 1 -----GEGTYGVVYKARNKLTGEVVALKKIR----- 26 usage_04645.pdb 1 --AEIGVGAYGTVYKARDPHSGHFVALKSVR----- 29 usage_04646.pdb 1 --AEIGVGAYGTVYKARDPHSGHFVALKSVR----- 29 usage_04962.pdb 1 ----IGEGTYGVVYKARNKLTGEVVALKK------- 25 usage_04991.pdb 1 ----IGNGAYGVVSSARRRLTGQQVAIKKI------ 26 usage_05153.pdb 1 -LAKIGQGTFGEVFKARHRKTGQKVALKK------- 28 usage_05161.pdb 1 -ISELGAG---VVFKVSHKPSGLVMARKLIH----- 27 G G v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################