################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:50 2021 # Report_file: c_0973_15.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00054.pdb # 2: usage_00057.pdb # 3: usage_00194.pdb # 4: usage_00231.pdb # 5: usage_00246.pdb # 6: usage_00352.pdb # 7: usage_00460.pdb # 8: usage_00495.pdb # 9: usage_00597.pdb # 10: usage_00698.pdb # 11: usage_00791.pdb # # Length: 85 # Identity: 5/ 85 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 85 ( 10.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 85 ( 65.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 -----------IGNGSFGVVYQAKLCD-S---G-ELVAIKKVL-QD-KR----------- 31 usage_00057.pdb 1 -----------LGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQ-HS--G-------PD-- 36 usage_00194.pdb 1 ------------GKGNFGSVELCRYDPLGDNTG-ALVAVKQLQ-HS--G-------PD-- 35 usage_00231.pdb 1 -----------IGEGVFGEVFQTIA-------DHTPVAIKIIA-IE--GPDLVNGS---- 35 usage_00246.pdb 1 -----------LGSGQFAVVKKCREKS-T---G-LQYAAKFIK-KR-RT-------KSSR 35 usage_00352.pdb 1 ------------GKGNFGSVELCRYDPLGDNTG-ALVAVKQLQ-HS--G-------PD-- 35 usage_00460.pdb 1 -----LKRIRDLGEGHFGKVELCRYDPEGDNTG-EQVAVKSLKN---------------- 38 usage_00495.pdb 1 -----------LGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQ-HS--G-------PD-- 36 usage_00597.pdb 1 -----LKRIRDLG-EGHGKVELCRYDPEGDNTG-EQVAVKSLK--PN------------- 38 usage_00698.pdb 1 --------LQQLGKGNFGSVEMCRYDPLQDNTG-EVVAVKKLQ-HS--T-------EE-- 39 usage_00791.pdb 1 SQLGK------------GSVELCRYDPLGDNTG-ALVAVKQLQ-HS--G-------PD-- 35 g V g vA K usage_00054.pdb 32 ---FK----NRELQIMRKL------ 43 usage_00057.pdb 37 ---Q-QRDFQREIQILKAL------ 51 usage_00194.pdb 36 ---Q-QRDFQREIQILKAL------ 50 usage_00231.pdb 36 HQKT-FEEILPEIIISKELSLLSGE 59 usage_00246.pdb 36 RGVS-REDIEREVSILKEI------ 53 usage_00352.pdb 36 ---Q-QRDFQREIQILKAL------ 50 usage_00460.pdb 39 ---H-IADLKKEIEILRNL------ 53 usage_00495.pdb 37 ---Q-QRDFQREIQILKAL------ 51 usage_00597.pdb 39 ---H-IADLKKEIEILRNL------ 53 usage_00698.pdb 40 ---H-LRDFEREIEILKSL------ 54 usage_00791.pdb 36 ---Q-QRDFQREIQILKAL------ 50 E I l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################