################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:49:11 2021 # Report_file: c_0118_24.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00002.pdb # 2: usage_00022.pdb # 3: usage_00068.pdb # 4: usage_00077.pdb # 5: usage_00122.pdb # 6: usage_00168.pdb # 7: usage_00169.pdb # 8: usage_00229.pdb # 9: usage_00256.pdb # 10: usage_00263.pdb # 11: usage_00266.pdb # 12: usage_00274.pdb # 13: usage_00500.pdb # 14: usage_00535.pdb # 15: usage_00536.pdb # 16: usage_00545.pdb # 17: usage_00546.pdb # # Length: 122 # Identity: 52/122 ( 42.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/122 ( 53.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/122 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 EVKLSESGPGLVKPSQSLSLTCTVTGYSITTNYAWTWIRQFPGNKLEWMGYIRSSVITRY 60 usage_00022.pdb 1 -VQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYMSYSGSTRY 59 usage_00068.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITNNYAWNWIRQFPGNKLEWMGYINYSGTTSY 59 usage_00077.pdb 1 DVQLQESGPSLVKPSQSLSLTCTVTGYSITSDFAWNWIRQFPGNKLEWMGYISYSGNTRY 60 usage_00122.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY 60 usage_00168.pdb 1 -VKLQESGPSLVKPSQTLSLTCSVTGDSIT-SDFWSWIRQFPGNRLEYMGFVQYSGETAY 58 usage_00169.pdb 1 -VKLQESGPSLVKPSQTLSLTCSVTGDSIT-SDFWSWIRQFPGNRLEYMGFVQYSGETAY 58 usage_00229.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY 60 usage_00256.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY 60 usage_00263.pdb 1 -VKLQQSGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMAYISYSGSTTY 59 usage_00266.pdb 1 QVTLSQSGPGLVKPSQSLSLTCTVTSYSITSDYAWNWIRQFAGQSLEWMGYISYSGSTSY 60 usage_00274.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY 60 usage_00500.pdb 1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY 60 usage_00535.pdb 1 EVQLQESGPSLVKPSQTLSLTCSVTGDSIT-SGYWNWIRKFPGNKLEYMGYISYGGSTYY 59 usage_00536.pdb 1 --QLQESGPSLVKPSQTLSLTCSVTGDSIT-SGYWNWIRKFPGNKLEYMGYISYGGSTYY 57 usage_00545.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWLRQLPGNKLEWMGYISYSGRIRY 59 usage_00546.pdb 1 -VQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWLRQLPGNKLEWMGYISYSGRIRY 59 L SG LV PSQ lSLTC VTg SIT W W R pGn LE g g Y usage_00002.pdb 61 NPSLKSRISITQDTSKNQFFLQLNSVTTEDTATYYCARYDYY----GNTGDYWGQGTSVT 116 usage_00022.pdb 60 NPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFCARGW-------PL-AYWGQGTQVS 111 usage_00068.pdb 60 NPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYFCVRGYDY----FAM-DYWGQGTSVT 114 usage_00077.pdb 61 NPSLKSRISITRDTSSNQFFLQLNSVTPEDTATYYCATAG------RGF-PYWGQGTLVT 113 usage_00122.pdb 61 NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAM-DYWGQGTTVT 119 usage_00168.pdb 59 NPSLKSRISITRDTSKNQYYLDLNSVTTEDTAVYYCANW--------HG-DYWGQGTTVT 109 usage_00169.pdb 59 NPSLKSRISITRDTSKNQYYLDLNSVTTEDTAVYYCANW--------HG-DYWGQGTTVT 109 usage_00229.pdb 61 NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAM-DYWGQGTTVT 119 usage_00256.pdb 61 NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAM-DYWGQGTTVT 119 usage_00263.pdb 60 NPSLKSRISITRDTSKNQFFLQLNSVTTEDTAIYYCARGG------TGF-DYWGAGTTLT 112 usage_00266.pdb 61 NPSLKSRISITRDTSKNQFFLQLNSVTTDDTATYYCARGG------TGF-PYWGTGTNVT 113 usage_00274.pdb 61 NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAM-DYWGQGTTVT 119 usage_00500.pdb 61 NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAM-DYWGQGTTVT 119 usage_00535.pdb 60 NPSLESRISITRDTSKNQYYLQLNSVTTEDTATYFCARLFGS----YYF-DYWGQGTTLT 114 usage_00536.pdb 58 NPSLESRISITRDTSKNQYYLQLNSVTTEDTATYFCARLFGS----YYF-DYWGQGTTLT 112 usage_00545.pdb 60 NPSLKRRISITRDTSKNQFFLQLNSVTTEDTATYYCARSDYGNY--GRG-DYWGQGTSVT 116 usage_00546.pdb 60 NPSLKRRISITRDTSKNQFFLQLNSVTTEDTATYYCARSDYGNY--GRG-DYWGQGTSVT 116 NPSL R SITrDTSkNQ L LnSVTteDTA Y Ca YWG GT t usage_00002.pdb 117 V- 117 usage_00022.pdb 112 V- 112 usage_00068.pdb 115 VS 116 usage_00077.pdb -- usage_00122.pdb -- usage_00168.pdb 110 VS 111 usage_00169.pdb 110 VS 111 usage_00229.pdb -- usage_00256.pdb -- usage_00263.pdb 113 VS 114 usage_00266.pdb 114 V- 114 usage_00274.pdb -- usage_00500.pdb -- usage_00535.pdb 115 VS 116 usage_00536.pdb 113 VS 114 usage_00545.pdb 117 VS 118 usage_00546.pdb 117 VS 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################