################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:50 2021 # Report_file: c_0785_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00106.pdb # 4: usage_00156.pdb # 5: usage_00219.pdb # # Length: 76 # Identity: 58/ 76 ( 76.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 59/ 76 ( 77.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 76 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIE--Y 58 usage_00105.pdb 1 -------QSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIE--TLYELDIEY 51 usage_00106.pdb 1 -------QSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIE--TLYELDIEY 51 usage_00156.pdb 1 -PYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIE--TLYELDIEY 57 usage_00219.pdb 1 -PYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIE--Y 57 QSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIe Y usage_00104.pdb 59 SQVLAKECGVENIRRA 74 usage_00105.pdb 52 SQVLAKECGVENIRRA 67 usage_00106.pdb 52 SQVLAKECGVENIRRA 67 usage_00156.pdb 58 SQVLAKECGVENIRRA 73 usage_00219.pdb 58 SQVLAKECGVENIRRA 73 SQVLAKECGVENIRRA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################