################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:47 2021 # Report_file: c_1390_148.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00051.pdb # 2: usage_00052.pdb # 3: usage_00074.pdb # 4: usage_00216.pdb # # Length: 81 # Identity: 0/ 81 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 81 ( 4.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/ 81 ( 71.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00051.pdb 1 --DQYADGEA--------------ARVWQLYIGDT------------------------- 19 usage_00052.pdb 1 ---------HSRLERLKKRYISYMVSDWRDLTANLMDSVFIDSSGKKSKDKEQIKEKFRK 51 usage_00074.pdb 1 EG-------HSRLERLKKRYISY-VSDWRDLTANL------------------------- 27 usage_00216.pdb 1 --EAYV-M----------------DTSYPSKIEDD------------------------- 16 w usage_00051.pdb 20 -R-SRTAEYKAWLLGLLRQHG 38 usage_00052.pdb 52 F----NEGFEDLVSKTKQ--- 65 usage_00074.pdb 28 ------EGFEDLVSKTKQ--- 39 usage_00216.pdb 17 -PFENLEDTDDLFKTNLN--- 33 e dl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################