################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:16:11 2021 # Report_file: c_0738_14.html ################################################################################################ #==================================== # Aligned_structures: 38 # 1: usage_00001.pdb # 2: usage_00018.pdb # 3: usage_00019.pdb # 4: usage_00049.pdb # 5: usage_00052.pdb # 6: usage_00053.pdb # 7: usage_00054.pdb # 8: usage_00062.pdb # 9: usage_00067.pdb # 10: usage_00085.pdb # 11: usage_00086.pdb # 12: usage_00087.pdb # 13: usage_00088.pdb # 14: usage_00122.pdb # 15: usage_00138.pdb # 16: usage_00139.pdb # 17: usage_00162.pdb # 18: usage_00163.pdb # 19: usage_00197.pdb # 20: usage_00204.pdb # 21: usage_00211.pdb # 22: usage_00226.pdb # 23: usage_00256.pdb # 24: usage_00317.pdb # 25: usage_00318.pdb # 26: usage_00362.pdb # 27: usage_00382.pdb # 28: usage_00394.pdb # 29: usage_00412.pdb # 30: usage_00413.pdb # 31: usage_00417.pdb # 32: usage_00418.pdb # 33: usage_00452.pdb # 34: usage_00512.pdb # 35: usage_00513.pdb # 36: usage_00514.pdb # 37: usage_00550.pdb # 38: usage_00555.pdb # # Length: 87 # Identity: 9/ 87 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 87 ( 14.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 87 ( 37.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -CRIMGWG--SITIPNETYP--DVPYCANINLVDYEVCQGAYN--------GLPA--K-- 43 usage_00018.pdb 1 QCLISGWG--NTLSSGVNEP--DLLQCLDAPLLPQADCEASYP--------GKIT--D-- 44 usage_00019.pdb 1 QCLISGWG--NTLSSGVNEP--DLLQCLDAPLLPQADCEASYP--------GKIT--D-- 44 usage_00049.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00052.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00053.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00054.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00062.pdb 1 VCHIMGWG--SITPIKVTYP--DVPYCAYINLLDDAVCQAGYP--------ELL---TEY 45 usage_00067.pdb 1 -CRIMGWG--KIS--TTTYP--DVPHCTNIFIVKHKWCEPLYP--------WV-PADS-- 42 usage_00085.pdb 1 -CLISGWG--NTKSSGSSYP--SLLQCLKAPVLSDSSCKSSYP--------GQIT--G-- 43 usage_00086.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00087.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00088.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00122.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00138.pdb 1 TCTVSGWG--TTTSPDVTFP--SDLMCVDVKLISPQDCTKVYK--------DLLE--N-- 44 usage_00139.pdb 1 TCTVSGWG--TTTSPDVTFP--SDLMCVDVKLISPQDCTKVYK--------DLLE--N-- 44 usage_00162.pdb 1 QCLISGWG--NTLSSGVNEP--DLLQCLDAPLLPQADCEASYP--------GKIT--D-- 44 usage_00163.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00197.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00204.pdb 1 -GLVAGWGLS------------DVLQYVKLPVVPHAECKTSYES-R-----YSVT--E-- 37 usage_00211.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00226.pdb 1 -CLISGWG--HTL--V-NHP--DLLQCLDAPLLPQADCEASYP--------GKIT--D-- 40 usage_00256.pdb 1 ECLISGWG--NTKSSGSSYP--SLLQCLKAPVLSDSSCKSSYP--------GQIT--G-- 44 usage_00317.pdb 1 QCLISGWG--HTKSSGTSHP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 44 usage_00318.pdb 1 QCLISGWG--HTKSSGTSHP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 44 usage_00362.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00382.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00394.pdb 1 -CLISGWG--NTKSSGSSYP--SLLQCLKAPVLSDSSCKSSYP--------GQIT--G-- 43 usage_00412.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00413.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00417.pdb 1 ECLISGWG--NTKSSGSSYP--SLLQCLKAPVLSDSSCKSSYP--------GQIT--G-- 44 usage_00418.pdb 1 ECLISGWG--NTKSSGSSYP--SLLQCLKAPVLSDSSCKSSYP--------GQIT--G-- 44 usage_00452.pdb 1 -CTVTGWG--HVAP-SVSLLTPKPLQQLEVPLISRETCNALYNIDAKPEEPHFVQ--E-- 52 usage_00512.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00513.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00514.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00550.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 usage_00555.pdb 1 -CLISGWG--NTKSSGTSYP--DVLKCLKAPILSDSSCKSAYP--------GQIT--S-- 43 c GWG C Y usage_00001.pdb 44 TTLCAGVLEG-GKDTCVGDSGGPLICN 69 usage_00018.pdb 45 NMVCVGFLEG-GKSSCQGDSGGPVVCN 70 usage_00019.pdb 45 NMVCVGFLEG-GKSSCQGDSGGPVVCN 70 usage_00049.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00052.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00053.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00054.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00062.pdb 46 RTLCAGILEG-GKDTCGGDSGGPLIC- 70 usage_00067.pdb 43 RTLCAGILKG-GRDTCHGDSGGPLIC- 67 usage_00085.pdb 44 NMICVGFLEG-GKDSCQGDSGGPVVCN 69 usage_00086.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00087.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00088.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00122.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00138.pdb 45 SMLCAGIPDS-KKNACNGDSGGPLVCR 70 usage_00139.pdb 45 SMLCAGIPDS-KKNACNGDSGGPLVCR 70 usage_00162.pdb 45 NMVCVGFLEG-GKDSCQGDSGGPVVCN 70 usage_00163.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00197.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00204.pdb 38 NMFCAGYYEK-DTCLGD--SGEAFVIF 61 usage_00211.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00226.pdb 41 NMVCVGFLEG-GKDSCQGDSGGPVVCN 66 usage_00256.pdb 45 NMICVGFLEG-GKDSCQGDSGGPVVCN 70 usage_00317.pdb 45 NMFCAGYLEGGKKSCQG-DSGGPVVC- 69 usage_00318.pdb 45 NMFCAGYLEGGKKSCQG-DSGGPVVC- 69 usage_00362.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00382.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00394.pdb 44 NMICVGFLEG-GKDSCQGDSGGPVVCN 69 usage_00412.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00413.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00417.pdb 45 NMICVGFLEG-GKDSCQGDSGGPVVCN 70 usage_00418.pdb 45 NMICVGFLEG-GKDSCQGDSGGPVVC- 69 usage_00452.pdb 53 DMVCAGYVEG-GKDACQGDSGGPLSCP 78 usage_00512.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00513.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00514.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00550.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 usage_00555.pdb 44 NMFCAGYLEG-GKDSCQGDSGGPVVCS 69 C G SGgp c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################