################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:53:04 2021 # Report_file: c_1380_191.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00003.pdb # 2: usage_00158.pdb # 3: usage_00163.pdb # 4: usage_00173.pdb # 5: usage_00262.pdb # 6: usage_00327.pdb # 7: usage_00487.pdb # 8: usage_00555.pdb # 9: usage_00600.pdb # 10: usage_00619.pdb # 11: usage_00673.pdb # 12: usage_00677.pdb # 13: usage_00736.pdb # 14: usage_00816.pdb # 15: usage_01030.pdb # 16: usage_01159.pdb # 17: usage_01161.pdb # 18: usage_01383.pdb # 19: usage_01384.pdb # 20: usage_01503.pdb # 21: usage_01552.pdb # 22: usage_01576.pdb # 23: usage_01763.pdb # 24: usage_01764.pdb # 25: usage_01917.pdb # 26: usage_01931.pdb # 27: usage_01937.pdb # 28: usage_01962.pdb # 29: usage_01987.pdb # 30: usage_02045.pdb # 31: usage_02057.pdb # 32: usage_02265.pdb # 33: usage_02341.pdb # 34: usage_02342.pdb # 35: usage_02365.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 44 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 44 ( 38.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --TNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 36 usage_00158.pdb 1 ----SDRTRQFIIESTAPVF-NV----KGLAGTSLTDLTE-AT- 33 usage_00163.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00173.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 38 usage_00262.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00327.pdb 1 -YTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 37 usage_00487.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00555.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00600.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00619.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00673.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 38 usage_00677.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 38 usage_00736.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_00816.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01030.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01159.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01161.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01383.pdb 1 SFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLI-----ASL-I 38 usage_01384.pdb 1 SFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLI-----ASL-I 38 usage_01503.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 38 usage_01552.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01576.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01763.pdb 1 TYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01764.pdb 1 TYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01917.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01931.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01937.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_01962.pdb 1 -FANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQ-----TNL-- 36 usage_01987.pdb 1 -YGDLNHLVSATMSGVTTSLRFPGQLNADLRKLA-----VNM-- 36 usage_02045.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_02057.pdb 1 --TNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-V 36 usage_02265.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_02341.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_02342.pdb 1 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 usage_02365.pdb 1 TYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ-----TNL-- 37 n l s t l dL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################