################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:50 2021 # Report_file: c_1369_61.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00192.pdb # 2: usage_00493.pdb # 3: usage_00506.pdb # 4: usage_00709.pdb # 5: usage_01003.pdb # 6: usage_01004.pdb # 7: usage_01006.pdb # 8: usage_01007.pdb # 9: usage_01008.pdb # 10: usage_01009.pdb # 11: usage_01013.pdb # 12: usage_01014.pdb # 13: usage_01024.pdb # 14: usage_01309.pdb # 15: usage_01344.pdb # 16: usage_01345.pdb # # Length: 73 # Identity: 52/ 73 ( 71.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 73 ( 71.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 73 ( 27.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00192.pdb 1 ----------LKLFLAQYREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 46 usage_00493.pdb 1 VKALKQVAGSLKLFLAQYREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 56 usage_00506.pdb 1 ---------SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLAT 50 usage_00709.pdb 1 ----------LKLFLAQYREVAAFA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLAT 47 usage_01003.pdb 1 ---------SLKLFLAQYREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 47 usage_01004.pdb 1 ---------SLKLFLAQYREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 47 usage_01006.pdb 1 ---------SLKLFLAQYREVAASA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLAT 48 usage_01007.pdb 1 ---------SLKLFLAQYREVAASA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLAT 50 usage_01008.pdb 1 ---------SLKLFLAQYREVAASA-S---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 47 usage_01009.pdb 1 ---------SLKLFLAQYREVAASA-Q------ASTKQTLVRGERLTQLLKQNQYSPLAT 44 usage_01013.pdb 1 ---------SLKLFLAQYREVAAFA-Q-----DASTKQTLVRGERLTQLLKQNQYSPLAT 45 usage_01014.pdb 1 ----------LKLFLAQYREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLAT 46 usage_01024.pdb 1 ----------LKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLAT 49 usage_01309.pdb 1 ---------SLKLFLAQYREVAAFAL------DASTKQTLVRGERLTQLLKQNQYSPLAT 45 usage_01344.pdb 1 ---------SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLAT 50 usage_01345.pdb 1 ---------SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLAT 50 LKLFLAQYREVAA A ASTKQTLVRGERLTQLLKQNQYSPLAT usage_00192.pdb 47 EEQVPLIYAGV-- 57 usage_00493.pdb 57 EEQVPLIYAGVNG 69 usage_00506.pdb 51 EEQVPLIYAGVNG 63 usage_00709.pdb 48 EEQVPLIYAGVNG 60 usage_01003.pdb 48 EEQVPLIYAGVNG 60 usage_01004.pdb 48 EEQVPLIYAGVNG 60 usage_01006.pdb 49 EEQVPLIYAGVNG 61 usage_01007.pdb 51 EEQVPLIYAGVNG 63 usage_01008.pdb 48 EEQVPLIYAGVNG 60 usage_01009.pdb 45 EEQVPLIYAGVNG 57 usage_01013.pdb 46 EEQVPLIYAGVNG 58 usage_01014.pdb 47 EEQVPLIYAGVNG 59 usage_01024.pdb 50 EEQVPLIYAGVNG 62 usage_01309.pdb 46 EEQVPLIYAGVNG 58 usage_01344.pdb 51 EEQVPLIYAGVNG 63 usage_01345.pdb 51 EEQVPLIYAGVNG 63 EEQVPLIYAGV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################