################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:25 2021 # Report_file: c_0517_20.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00016.pdb # 2: usage_00046.pdb # 3: usage_00099.pdb # 4: usage_00170.pdb # 5: usage_00196.pdb # 6: usage_00197.pdb # # Length: 128 # Identity: 82/128 ( 64.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/128 ( 64.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/128 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -REGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASL 57 usage_00046.pdb 1 -------------YSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASL 45 usage_00099.pdb 1 ------------SYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASL 46 usage_00170.pdb 1 TREGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASL 58 usage_00196.pdb 1 -------------YSFIALAKAGREMMKGRN-GSLLTLSYLGAERTMPNYNVMGMAKASL 46 usage_00197.pdb 1 -------------YSFIALAKAGREMMKGRN-GSLLTLSYLGAERTMPNYNVMGMAKASL 46 YSF A AKA R M LLTLSYLGAER PNYNVMG AKASL usage_00016.pdb 58 EANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 117 usage_00046.pdb 46 EANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 105 usage_00099.pdb 47 EANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 106 usage_00170.pdb 59 EANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 118 usage_00196.pdb 47 EAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTPLRRNVTIEEVG 106 usage_00197.pdb 47 EAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTPLRRNVTIEEVG 106 EA VRY A G EG RVNA SAGPIRTLAASGIK FRKMLA E TP RR VTIE VG usage_00016.pdb 118 NSAAFLCS 125 usage_00046.pdb 106 NSAAFLCS 113 usage_00099.pdb 107 NSAAFLCS 114 usage_00170.pdb 119 NSAAFLCS 126 usage_00196.pdb 107 NAGAFLCS 114 usage_00197.pdb 107 NAGAFLCS 114 N AFLCS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################