################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:16 2021 # Report_file: c_0844_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00088.pdb # 2: usage_00089.pdb # 3: usage_00090.pdb # 4: usage_00139.pdb # 5: usage_00140.pdb # 6: usage_00220.pdb # 7: usage_00329.pdb # 8: usage_00330.pdb # 9: usage_00331.pdb # 10: usage_00332.pdb # 11: usage_00333.pdb # 12: usage_00421.pdb # # Length: 98 # Identity: 19/ 98 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 98 ( 29.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 98 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00088.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00089.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00090.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00139.pdb 1 --DNTAIHHTS-------YGIKKLWLTASGGSFLDKSIKQMQNAS-VKEA-V-----M-G 43 usage_00140.pdb 1 --DNTAIHHTS-------YGIKKLWLTASGGSFLDKSIKQMQNAS-VKEA-V-----M-G 43 usage_00220.pdb 1 EHSAL----AQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGA------HP- 49 usage_00329.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00330.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00331.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00332.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00333.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 usage_00421.pdb 1 --NFS----KI-------NNINKIFLCSSGGPFQNLTMDELKNVTSENAL-KHPKWKM-G 45 i K L SGG F n m usage_00088.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHK- 82 usage_00089.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIV--- 80 usage_00090.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHK- 82 usage_00139.pdb 44 QKISIDSATMMNKGLELIEACHLFDLKEHQIQVVI--- 78 usage_00140.pdb 44 QKISIDSATMMNKGLELIEACHLFDLKEHQIQVVI--- 78 usage_00220.pdb 50 --NTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQ 85 usage_00329.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHK- 82 usage_00330.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIV--- 80 usage_00331.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIV--- 80 usage_00332.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIV--- 80 usage_00333.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIV--- 80 usage_00421.pdb 46 KKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHK- 82 i idSAtmmNKGLE IE LFd I V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################