################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:56 2021 # Report_file: c_0076_16.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00066.pdb # 2: usage_00070.pdb # 3: usage_00073.pdb # 4: usage_00074.pdb # 5: usage_00098.pdb # 6: usage_00099.pdb # 7: usage_00100.pdb # 8: usage_00127.pdb # 9: usage_00129.pdb # # Length: 170 # Identity: 52/170 ( 30.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/170 ( 30.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/170 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 DDAF---AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLN 57 usage_00070.pdb 1 ----QN-----E----------------LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLN 35 usage_00073.pdb 1 -DAF---AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLN 56 usage_00074.pdb 1 DDAF---AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLN 57 usage_00098.pdb 1 ------VQGIQY----------------LPNLTSLNLSNNQITDISPIQYLPNVTKLFLN 38 usage_00099.pdb 1 ------VQGIQY----------------LPNLTSLNLSNNQITDISPIQYLPNVTKLFLN 38 usage_00100.pdb 1 ------VQGIQY----------------LPNLTSLNLSNNQITDISPIQYLPNVTKLFLN 38 usage_00127.pdb 1 DADL---AEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLN 57 usage_00129.pdb 1 -ADL---AEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLN 56 L I YL N L LN usage_00066.pdb 58 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 117 usage_00070.pdb 36 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 95 usage_00073.pdb 57 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 116 usage_00074.pdb 58 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 117 usage_00098.pdb 39 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 98 usage_00099.pdb 39 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 98 usage_00100.pdb 39 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 98 usage_00127.pdb 58 GNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTK- 116 usage_00129.pdb 57 GNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTK- 115 GN TDI PL NL L L NK D S L L L L L ISDI L L usage_00066.pdb 118 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 166 usage_00070.pdb 96 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 144 usage_00073.pdb 117 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQIRRIVPLARLTKLQNLYL 165 usage_00074.pdb 118 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQIRRIVPLARLTKLQNLYL 166 usage_00098.pdb 99 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 147 usage_00099.pdb 99 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 147 usage_00100.pdb 99 ESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 147 usage_00127.pdb 117 YSLNLGANHNLSDLSPLSN-TGLNYLTVTESKVKDVTPIANLTDLYSLSL 165 usage_00129.pdb 116 YSLNLGANHNLSDLSPLSN-TGLNYLTVTESKVKDVTPIANLTDLYSLSL 164 SL LG N D LS T L L P A LT L L L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################