################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:43:00 2021 # Report_file: c_1297_209.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00891.pdb # 2: usage_00892.pdb # 3: usage_00893.pdb # 4: usage_01125.pdb # 5: usage_01126.pdb # 6: usage_01127.pdb # 7: usage_01128.pdb # 8: usage_01129.pdb # 9: usage_01130.pdb # 10: usage_01131.pdb # 11: usage_01132.pdb # 12: usage_01133.pdb # 13: usage_01134.pdb # 14: usage_01135.pdb # 15: usage_01136.pdb # 16: usage_01776.pdb # # Length: 36 # Identity: 4/ 36 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 36 ( 72.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 36 ( 27.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00891.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_00892.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_00893.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01125.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01126.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01127.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01128.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVST- 33 usage_01129.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01130.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01131.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01132.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01133.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01134.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01135.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01136.pdb 1 GNA--KKAAEEAGVTDVKVSISHDDLQAVAVAVSTK 34 usage_01776.pdb 1 ---TST-SEEVCSF-YLKIDTQDI--YKRIVACASY 29 k aaEeagv dvKvsishd qavaVAvst #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################