################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:23:42 2021 # Report_file: c_0661_5.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00028.pdb # 2: usage_00239.pdb # 3: usage_00246.pdb # 4: usage_00251.pdb # 5: usage_00252.pdb # 6: usage_00402.pdb # 7: usage_00403.pdb # 8: usage_00404.pdb # 9: usage_00489.pdb # 10: usage_00490.pdb # 11: usage_00491.pdb # 12: usage_00492.pdb # 13: usage_00493.pdb # 14: usage_00498.pdb # 15: usage_00499.pdb # 16: usage_00500.pdb # 17: usage_00501.pdb # 18: usage_00538.pdb # 19: usage_00560.pdb # 20: usage_00561.pdb # # Length: 79 # Identity: 17/ 79 ( 21.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 79 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 79 ( 38.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 --EEVSGYDENMNTIRTYQVCNVF-ESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSI 57 usage_00239.pdb 1 QWEELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSL 60 usage_00246.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00251.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00252.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRD---- 55 usage_00402.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00403.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00404.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00489.pdb 1 --EEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 57 usage_00490.pdb 1 --EEVSIMD--NTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 55 usage_00491.pdb 1 --EEVSIM---DTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 54 usage_00492.pdb 1 --EEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 57 usage_00493.pdb 1 --EEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 57 usage_00498.pdb 1 --EEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 57 usage_00499.pdb 1 --EEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 57 usage_00500.pdb 1 --EEVSIMD--NTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 55 usage_00501.pdb 1 --EEVSIM---NTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 54 usage_00538.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 usage_00560.pdb 1 ---EVSIMD-KNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 55 usage_00561.pdb 1 GWEEVSIMDEKNTPIRTYQVCNVM-EPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSL 59 EvS iRTYqVCnV epsQnnWLRT wi R GA rvy e kFt rd usage_00028.pdb 58 PSVPGSCKETFNLYYYEAD 76 usage_00239.pdb 61 PRAGRSCKETFTVFYYESD 79 usage_00246.pdb 60 PGVMGTCKETFNLYYYE-- 76 usage_00251.pdb 60 PGVMGTCKETFNLYYYE-- 76 usage_00252.pdb ------------------- usage_00402.pdb 60 PGVMGTCKETFNLYYYE-- 76 usage_00403.pdb 60 PGVMGTCKETFNLYYYE-- 76 usage_00404.pdb 60 PGVMGTCKETFNLYYYE-- 76 usage_00489.pdb 58 PGVMGTCKETFNLYYYE-- 74 usage_00490.pdb 56 PGVMGTCKETFNLYYYESD 74 usage_00491.pdb 55 PGVMGTCKETFNLYYYE-- 71 usage_00492.pdb 58 PGVMGTCKETFNLYYYE-- 74 usage_00493.pdb 58 PGVMGTCKETFNLYYYE-- 74 usage_00498.pdb 58 PGVMGTCKETFNLYYYE-- 74 usage_00499.pdb 58 PGVMGTCKETFNLYYYESD 76 usage_00500.pdb 56 PG--GTCKETFNLYYYESD 72 usage_00501.pdb 55 PGVMGTCKETFNLYYYE-- 71 usage_00538.pdb 60 P---GTCKETFNLYYYE-- 73 usage_00560.pdb 56 PGVMGTCKETFNLYYYE-- 72 usage_00561.pdb 60 PGVMGTCKETFNLYYYE-- 76 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################