################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:41:19 2021 # Report_file: c_0152_2.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00013.pdb # 2: usage_00036.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00047.pdb # 6: usage_00048.pdb # 7: usage_00068.pdb # 8: usage_00078.pdb # 9: usage_00079.pdb # 10: usage_00085.pdb # 11: usage_00094.pdb # 12: usage_00095.pdb # 13: usage_00097.pdb # 14: usage_00098.pdb # 15: usage_00103.pdb # 16: usage_00118.pdb # 17: usage_00150.pdb # 18: usage_00151.pdb # 19: usage_00152.pdb # 20: usage_00161.pdb # 21: usage_00170.pdb # 22: usage_00186.pdb # 23: usage_00190.pdb # 24: usage_00209.pdb # 25: usage_00211.pdb # 26: usage_00221.pdb # 27: usage_00222.pdb # 28: usage_00235.pdb # # Length: 116 # Identity: 12/116 ( 10.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/116 ( 22.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/116 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 EIVLTQSPGILSLSPGETATLFCKASQG-GN---AMTWYQKRRGQVPRLLIYDTSRRASG 56 usage_00036.pdb 1 -IVLTQSPATLSLSPGERATLSCRASQS-VS-S-YLAWYQQKPGQAPRLLIYDASNRATG 56 usage_00043.pdb 1 ELVLTQSPGTLSLSAGERATLSCRASQS-VSSG-SLAWYQQKPGQAPRLLIYGASTRATG 58 usage_00044.pdb 1 -LVLTQSPGTLSLSAGERATLSCRASQS-VSSG-SLAWYQQKPGQAPRLLIYGASTRATG 57 usage_00047.pdb 1 -IVMTQSPATLSVSPGERATLSCRASES-VS-S-DLAWYQQKPGQAPRLLIYGASTRATG 56 usage_00048.pdb 1 -IVMTQSPATLSVSPGERATLSCRASES-VS-S-DLAWYQQKPGQAPRLLIYGASTRATG 56 usage_00068.pdb 1 --VLTQSPGTLSLSPGERATLSCRASQS-VSSS-YLAWYQQKPGQAPRLLIYGASSRATG 56 usage_00078.pdb 1 QA-VVTQESALTTSPGETVTLTCRSSSGAITTSHYANWIQEKPDHLFTGLISGTNNRAPG 59 usage_00079.pdb 1 --ELTQSPATLSVSPGERATLSCRASQS-VS-S-NLAWYQQKPGQAPRLLIYGASTRATG 55 usage_00085.pdb 1 -IVLTQSPGTLSLSPGERATLSCRASQG-ISRS-YLAWYQQKPGQAPSLLIYGASSRATG 57 usage_00094.pdb 1 EIVLTQSPGTLSLSAGERATLSCRASQS-VSAR-NLAWYQQKPGQAPRLLLYGVSIRNTG 58 usage_00095.pdb 1 EIVLTQSPGTLSLSAGERATLSCRASQS-VSAR-NLAWYQQKPGQAPRLLLYGVSIRNTG 58 usage_00097.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQS-VR-S-YLAWYQQKPGQAPRLLFSDASNRATG 56 usage_00098.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQS-VR-S-YLAWYQQKPGQAPRLLFSDASNRATG 56 usage_00103.pdb 1 -IVMTQSPDTLSVSPGETVTLSCRASQN-IN-K-NLAWYQYKPGQSPRLVIFETYSKIAA 56 usage_00118.pdb 1 --QMTQSPGTLSLSPGERATLSCRASQS-VS-S-YLAWYQQKPGQAPRLLIYDASNRATG 55 usage_00150.pdb 1 EIVLTQSPGILSLSPGETATLFCKASQG-GN---AMTWYQKRRGQVPRLLIYDTSRRASG 56 usage_00151.pdb 1 EIVLTQSPGILSLSPGETATLFCKASQG-GN---AMTWYQKRRGQVPRLLIYDTSRRASG 56 usage_00152.pdb 1 EIVLTQSPGILSLSPGETATLFCKASQG-GN---AMTWYQKRRGQVPRLLIYDTSRRASG 56 usage_00161.pdb 1 -LTLTQSPATLSLSPGERATLSCRASQS-VS-S-YLAWYQQKPGQAPRLLIYDASNRATG 56 usage_00170.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQS-VSSS-YLAWYQQKPGQAPRLLIYGASSRATG 58 usage_00186.pdb 1 -IVLTQSPATLSVSPGERATLSCRASQS-VR-S-YLAWYQQKPGQAPRLLFSDASNRATG 56 usage_00190.pdb 1 EIVLTQSPGTLSLSPGERATLSCRASQS-VSSS-YLAWYQQKPGQAPRLLIYGASTRATG 58 usage_00209.pdb 1 EIVMTQSPVTVSVSRGGTATLSCRASQG-VG-S-DVAWYQHKPGQTPRLLIYGASTRASG 57 usage_00211.pdb 1 EIVLTQSPATLSVSPGERATLSCRASQN-VHPR-YFAWYQQKRGQSPRLLIHSGSTRAAG 58 usage_00221.pdb 1 EIVLTQAPGTLSLSPGERATFSCRSSHS-IRSR-RVAWYQHKPGQAPRLVIHGVSNRASG 58 usage_00222.pdb 1 DI-ELTQPPSVSVAPGQTARISCSGDS--IGKK-YAYWYQQKPGQAPVLVI--------- 47 usage_00235.pdb 1 --VLTQSPATLSLSPGERATLSCRASQS-VSDA-YLAWYQQKPGQAPRLLIYDASSRATG 56 p s s G t C s WyQ gq p l usage_00013.pdb 57 VPDRFVGSG-SGTDFFLTINKLDREDFAVYYCQQF------EFFGLGS-ELEV--- 101 usage_00036.pdb 57 IPARFSGSG-SGTDFTLTISSLEPEDFAVYYCQQY------EFFGQGT-KLEI--- 101 usage_00043.pdb 59 IPDRFSGSG-SGTDFTLTIGRLEPEDLAVYYCQQYGTS--PYTFGQGT-KLEIKRT 110 usage_00044.pdb 58 IPDRFSGSG-SGTDFTLTIGRLEPEDLAVYYCQQYGTS--PYTFGQGT-KLEIKRT 109 usage_00047.pdb 57 VPARFSGSG-SGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGT-RLEI--- 107 usage_00048.pdb 57 VPARFSGSG-SGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGT-RLEI--- 107 usage_00068.pdb 57 IPDRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGSS--PSTFGQGT-KVEI--- 105 usage_00078.pdb 60 VPARFSGSLIGD-KAALTITGAQTEDEAIYICALWFSN--QFIFGSGT-KVTV--- 108 usage_00079.pdb 56 IPARFSGSG-SGTEFTLTVSRLEPEDSAVYFCQQYYRS--PLTFGGGT-KVEI--- 104 usage_00085.pdb 58 IPDRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQFGSS--PWTFGQGT-KVEIKRT 109 usage_00094.pdb 59 VPDRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGDS--PTFGQGT--KVEIKRT 109 usage_00095.pdb 59 VPDRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGDS--PTFGQGT--KVEIKRT 109 usage_00097.pdb 57 IPARFTGSG-SGTDFTLTISSLEPEDFAIYYCQQYRYS--PRTFGQGT-KVEI--- 105 usage_00098.pdb 57 IPARFTGSG-SGTDFTLTISSLEPEDFAIYYCQQYRYS--PRTFGQGT-KVEI--- 105 usage_00103.pdb 57 FPARFVASG-SGTEFTLTINNMQSEDVAVYYCQQYEEW--PRTFGQGT-KVDI--- 105 usage_00118.pdb 56 IPARFSGSG-SGTEFTLTISSLQSEDFAVYYCQQYDKW--PLTFGGGT-KVEI--- 104 usage_00150.pdb 57 VPDRFVGSG-SGTDFFLTINKLDREDFAVYYCQQF------EFFGLGS-ELEV--- 101 usage_00151.pdb 57 VPDRFVGSG-SGTDFFLTINKLDREDFAVYYCQQF------EFFGLGS-ELEV--- 101 usage_00152.pdb 57 VPDRFVGSG-SGTDFFLTINKLDREDFAVYYCQQF------EFFGLGS-ELEV--- 101 usage_00161.pdb 57 IPARFSGSG-SGTDFTLTISSLEPEDFAVYYCQQRSNW--ITFGQGT--RLEI--- 104 usage_00170.pdb 59 IPDRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGSS--PLTFGQGT-KVEI--- 107 usage_00186.pdb 57 IPARFTGSG-SGTDFTLTISSLEPEDFAIYYCQQYRYS--PRTFGQGT-KVEI--- 105 usage_00190.pdb 59 IPARFSGSG-SGTDFTLTISRLEPEDLAVYYCQQYGSS--PWTFGQGT-KVEI--- 107 usage_00209.pdb 58 VPERFSGSG-FHVDFTLSISGLQPEDVAIYYCQQY------ETFGQGT-KVEI--- 102 usage_00211.pdb 59 IADRFSGGG-SGMHFTLTITRVEPEDFAVYFCQQYGGS--PYTFGQGT-RVEL--- 107 usage_00221.pdb 59 ISDRFSGSG-SGTDFTLTITRVEPEDFALYYCQVYGAS--SYTFGQGT-KLER--- 107 usage_00222.pdb 48 --ERFSGSN-SGNTATLTISGTQAEDEADYYCSAWGDK--GMVFGGGT-KLT---- 93 usage_00235.pdb 57 VPARFSGSG-SGTDFTLTISSLEPEDFAVYYCHQYIQL--HSFTFGQGTKVEI--- 106 RF gs Lti ED A Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################