################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:00:59 2021 # Report_file: c_0136_9.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # # Length: 176 # Identity: 68/176 ( 38.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 168/176 ( 95.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/176 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 YPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN 60 usage_00039.pdb 1 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKN 57 usage_00040.pdb 1 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKN 57 usage_00041.pdb 1 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKN 57 YPKDSfyIAlkLnlnkekRvlefGtGSGAllAVLseva GeVwtfEavEEFyKtAqkN usage_00007.pdb 61 LTKWGLIERVTIKVRDISEG-FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPT 119 usage_00039.pdb 58 LKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 117 usage_00040.pdb 58 LKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 117 usage_00041.pdb 58 LKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 117 LkKfnLgknVkffnvDfkda vpEgifhAaFvDVrePWhYleKvhksLmeGapvgfllPT usage_00007.pdb 120 TNQVQETLKKLQELPFIRIEVWESLFRPYKPVPERLRPVDRMVAHTAYMIFATKVC 175 usage_00039.pdb 118 ANQVIKLLESIENYFGN-LEVVEILHRHYKTISERFRPEDQMVAHTAYLVFGR--- 169 usage_00040.pdb 118 ANQVIKLLESIENYFGN-LEVVEILHRHYKTISERFRPEDQMVAHTAYLVFGR--- 169 usage_00041.pdb 118 ANQVIKLLESIENYFGN-LEVVEILHRHYKTISERFRPEDQMVAHTAYLVFGR--- 169 aNQViklLesienyfgn lEVvEiLhRhYKtisERfRPeDqMVAHTAYlvFgr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################