################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:43:20 2021 # Report_file: c_0147_9.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00085.pdb # 2: usage_00102.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # 5: usage_00115.pdb # 6: usage_00151.pdb # 7: usage_00208.pdb # 8: usage_00215.pdb # 9: usage_00216.pdb # 10: usage_00228.pdb # 11: usage_00229.pdb # 12: usage_00231.pdb # 13: usage_00401.pdb # 14: usage_00484.pdb # 15: usage_00485.pdb # 16: usage_00501.pdb # 17: usage_00622.pdb # 18: usage_00636.pdb # 19: usage_00644.pdb # 20: usage_00659.pdb # 21: usage_00736.pdb # 22: usage_00739.pdb # # Length: 125 # Identity: 44/125 ( 35.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 63/125 ( 50.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/125 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00085.pdb 1 VKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTE 60 usage_00102.pdb 1 VKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTE 60 usage_00108.pdb 1 VKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTE 60 usage_00109.pdb 1 VKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTE 60 usage_00115.pdb 1 VILVESGGGLVQPGGSLRLSCSTSGFTFTDYYMSWVRQPPGKALEWLGFIRNKPKGYTTE 60 usage_00151.pdb 1 VKLVESGGGLVQPGGSLRLSCATSGFSFTDYYMAWVRQPPGKALEWLAFIRNKANGYTTD 60 usage_00208.pdb 1 VKLVESGGGLVQPGGSLSLSCAASGFTFSDYYMTWVRQAPGKAPEWLALIRNKRNGDTAE 60 usage_00215.pdb 1 VQLVQSGGGLVQPKGSLKLSCAASGFNFNTYAMHWVRQAPGKGLEWIGRIRSKSHNYATD 60 usage_00216.pdb 1 VNLVESGGGLVQPGGSLRLSCATSGFTFIDNYMSWVRQPPGKALEWLGFIRNKVNGYTTE 60 usage_00228.pdb 1 VMLVESGGGLVQPGNSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTE 60 usage_00229.pdb 1 VMLVESGGGLVQPGNSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTE 60 usage_00231.pdb 1 VMLVESGGGLVQPGNSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTE 60 usage_00401.pdb 1 VKLVESGGGLVQPGGSLSLSCATSGFTFIDYYMSWFRQPPGKALEWLGLIRNKGNGYTME 60 usage_00484.pdb 1 VKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTE 60 usage_00485.pdb 1 VKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTE 60 usage_00501.pdb 1 VMLVESGGGLVQPGGSLRLSCATSGFTFIDYYMSWVRQPPGKALEWLGFIRNKGNGYTTE 60 usage_00622.pdb 1 VQLLESGGGLVQPGGSLRLSCATSGFTFTDYYMNWVRQAPGKGLEWLGFIGNKANGYTTE 60 usage_00636.pdb 1 VKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMNWVRQPPGKALEWLGFIGNKANGYTTE 60 usage_00644.pdb 1 VKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTE 60 usage_00659.pdb 1 VKLVESGGGLVQPGGSLSLSCAASGFTFSDYYMTWVRQAPGKAPEWLALIRNKRNGDTAE 60 usage_00736.pdb 1 VKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTVE 60 usage_00739.pdb 1 VMLVESGGGLVQPGGSLRLSCATSGFTFIDYYMSWVRQPPGKALEWLGFIRNKGNGYTTE 60 V LveSGGGLVQ g SL L Ca SGF F dyyM WvRQ PGK EWl I nK g t usage_00085.pdb 61 YSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDG----YYE-RFSYWGQGT 115 usage_00102.pdb 61 YSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDG----YYE-RFSYWGQGT 115 usage_00108.pdb 61 YSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDG----YYE-RFSYWGQGT 115 usage_00109.pdb 61 YSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDG----YYE-RFSYWGQGT 115 usage_00115.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCVRDIYSFG--SRD-GMDYWGQGT 117 usage_00151.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARGDYY------G-AWFAYWGQG 113 usage_00208.pdb 61 YSASVKGRFTISRDYSRSILHLQMNALRTEDSATYYCVRQGRG------Y-TLDYWGQGT 113 usage_00215.pdb 61 YADPVKDRFTISRDDSQGLLYLLMNNLKTEDTAMYYCMREGIY------G-SFAYWGQGT 113 usage_00216.pdb 61 YGPSVKGRFTISRDDSQSILYLQMNTLRTEDSATYYCVRDNGS----DYRWYFDVWGAGT 116 usage_00228.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISPSYGVYYE-GFAYWGQGT 119 usage_00229.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISPSYGVYYE-GFAYWGQGT 119 usage_00231.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISPSYGVYYE-GFAYWGQGT 119 usage_00401.pdb 61 YSASLKGRFTISRDNSQSIVYLHMNTLTAEDSATYYCARVDYG------T-NYDYWGQGT 113 usage_00484.pdb 61 YSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDG----YYE-RFAYWGQGT 115 usage_00485.pdb 61 YSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDG----YYE-RFAYWGQGT 115 usage_00501.pdb 61 YSTSVKRFTI-SRDN--SAVYLQMNTLRAEDSATYYCARDIGY----GNS-PFAYWGQGT 112 usage_00622.pdb 61 YSASVKGRFTISRDKSKSTLYLQMNTLQAEDSAIYYCTRDRGL------R-FYFDYWGQG 113 usage_00636.pdb 61 YSASVKGRFTISRDKSQSILYLQMNTLRAEDSATYYCTRDRGL------R-FYFDYWGQG 113 usage_00644.pdb 61 YSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDG----YYE-RFSYWGQGT 115 usage_00659.pdb 61 YSASVKGRFTISRDYSRSILHLQMNALRTEDSATYYCVRQGRG------Y-TLDYWGQGT 113 usage_00736.pdb 61 YSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDGYY------V-DAMDYWGQG 113 usage_00739.pdb 61 YSTSVKGRFTISRDNSQSIVYLQMNTLRAEDSATYYCARDIGY----GNS-PFAYWGQGT 115 Y svK rft SRD s L MN L EDsA YYC R usage_00085.pdb 116 LVTV- 119 usage_00102.pdb 116 LVTV- 119 usage_00108.pdb 116 LVTV- 119 usage_00109.pdb 116 LVTV- 119 usage_00115.pdb 118 SVTV- 121 usage_00151.pdb 114 TLVTV 118 usage_00208.pdb 114 SVTVS 118 usage_00215.pdb 114 LVTVS 118 usage_00216.pdb 117 TVTV- 120 usage_00228.pdb 120 LVTV- 123 usage_00229.pdb 120 LVTV- 123 usage_00231.pdb 120 LVTV- 123 usage_00401.pdb 114 TLTV- 117 usage_00484.pdb 116 LVTV- 119 usage_00485.pdb 116 LVTV- 119 usage_00501.pdb 113 LVTVS 117 usage_00622.pdb 114 TLVTV 118 usage_00636.pdb 114 TTLTV 118 usage_00644.pdb 116 LVTV- 119 usage_00659.pdb 114 SVTVS 118 usage_00736.pdb 114 TSVTV 118 usage_00739.pdb 116 LVTVS 120 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################