################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:21:32 2021 # Report_file: c_0185_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00013.pdb # 2: usage_00020.pdb # 3: usage_00055.pdb # 4: usage_00056.pdb # 5: usage_00082.pdb # 6: usage_00083.pdb # # Length: 157 # Identity: 43/157 ( 27.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 81/157 ( 51.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/157 ( 8.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 MNDAFQYVLDSGGICSEDAYPYLARDEECRAQSCEK-VVKILGFKDVPRRSEAAMKAALA 59 usage_00020.pdb 1 ADDAFRWVITNGGIASDANYPYTGVDGTCDLNK--PIAARIDGYTNVP-NSSSALLDAVA 57 usage_00055.pdb 1 MEPAFTYVIKHGGIAPEASYPYVGKRETCDKAKIKD-VLKIDGRQNVPGLDEEALRKAVA 59 usage_00056.pdb 1 MEPAFTYVIKHGGIAPEASYPYVGKRETCDKAKIKD-VLKIDGRQNVPGLDEEALRKAVA 59 usage_00082.pdb 1 MEPAFTYVIKHGGIAPEASYPYVGKRETCDKAKIKD-VLKIDGRQNVPGLDEEALRKAVA 59 usage_00083.pdb 1 MEPAFTYVIKHGGIAPEASYPYVGKRETCDKAKIKD-VLKIDGRQNVPGLDEEALRKAVA 59 m AF yVi GGIa ea YPY g etCd k v kIdG nVP e Al AvA usage_00013.pdb 60 KSPVSIAIEADQMPFQFYHEGVFD--ASCGT---DLDHGVLLVGYGTDKESKKDFWIMKN 114 usage_00020.pdb 58 KQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYGSN-GTNADYWIVKN 116 usage_00055.pdb 60 HQPVATGIQLSGHGLQFYSEGVYT--GDCGT---EPNHGVGIVGYGEN-EKGIKFWTVKN 113 usage_00056.pdb 60 HQPVATGIQLSGHGLQFYSEGVYT--GDCGT---EPNHGVGIVGYGEN-EKGIKFWTVKN 113 usage_00082.pdb 60 HQPVATGIQLSGHGLQFYSEGVYT--GDCGT---EPNHGVGIVGYGEN-EKGIKFWTVKN 113 usage_00083.pdb 60 HQPVATGIQLSGHGLQFYSEGVYT--GDCGT---EPNHGVGIVGYGEN-EKGIKFWTVKN 113 qPV I s QfY egv Cgt HgV iVGYG n e fW vKN usage_00013.pdb 115 SWGTGWGRDGYMYMAMHK-GEEGQCGLLLDASFP--- 147 usage_00020.pdb 117 SWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYP--- 150 usage_00055.pdb 114 SWGPTWGEKGYIHLQRGA-RKEGLCGVAMHSSFPIMN 149 usage_00056.pdb 114 SWGPTWGEKGYIHLQRGA-RKEGLCGVAMHSSFP--- 146 usage_00082.pdb 114 SWGPTWGEKGYIHLQRGA-RKEGLCGVAMHSSFP--- 146 usage_00083.pdb 114 SWGPTWGEKGYIHLQRGA-RKEGLCGVAMHSSFP--- 146 SWG WG GYi r r eG Cg SfP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################