################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:59 2021 # Report_file: c_0113_23.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00002.pdb # 2: usage_00089.pdb # 3: usage_00155.pdb # 4: usage_00157.pdb # 5: usage_00159.pdb # 6: usage_00227.pdb # 7: usage_00251.pdb # # Length: 96 # Identity: 3/ 96 ( 3.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 96 ( 8.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 96 ( 45.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -----------------------TIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSL 37 usage_00089.pdb 1 ------DVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGST 54 usage_00155.pdb 1 -------------TTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSA 47 usage_00157.pdb 1 ------DVRIGSNCSIDRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGST 54 usage_00159.pdb 1 ----------------------LVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGAC 38 usage_00227.pdb 1 RVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSL 60 usage_00251.pdb 1 ----------------------LVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGAC 38 v i IA i t aG usage_00002.pdb 38 KIGRYCMIGGASVINGHMEICDKVTVTGMGMVMR-- 71 usage_00089.pdb 55 KIGNHVIIGGQAGITGHICIA--------------- 75 usage_00155.pdb 48 KIGRHCMLAGGVGLVGHIEICDNVFVT--------- 74 usage_00157.pdb 55 KIGKNCILAGACGVAGHLSIA--------------- 75 usage_00159.pdb 39 GVAGHLSIADNVTLTGMSMVTKNISEA--GTYS-SG 71 usage_00227.pdb 61 KIGRYCMIGGASVIN--------------------- 75 usage_00251.pdb 39 GVAGHLSIADNVTLTGMSMVTKNISEA--GTYS-SG 71 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################