################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:22 2021 # Report_file: c_0929_85.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00025.pdb # 2: usage_00035.pdb # 3: usage_00398.pdb # 4: usage_00441.pdb # 5: usage_00453.pdb # 6: usage_00740.pdb # 7: usage_01431.pdb # 8: usage_01432.pdb # # Length: 61 # Identity: 3/ 61 ( 4.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 61 ( 11.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 61 ( 36.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 --ASIEVKVQQLDPVNGN-KD-VGTVTITESN--Y--GLVFTPDLQGLSEGLHGFHI-HE 51 usage_00035.pdb 1 --TKAVCVLKGDG-----PV--QGIINFEQKESNG--PVKVWGSIKGLTEGLHGFHV-HE 48 usage_00398.pdb 1 --HHVQLVNR--E-----GK-AVGFIEIKESD-DEGLDIHISANS--LRPGASLGFHI-- 45 usage_00441.pdb 1 --TKAVAVLKGDG-----PV--QGIINFEQKESNG--PVKVWGSIKGLTEGLHGFHV-HE 48 usage_00453.pdb 1 --TKAVCVLKGDG-----PV--QGTIHFEAKG--D--TVVVTGSITGLTEGDHGFHV-HQ 46 usage_00740.pdb 1 --TKAVCVLKGDG-----PV--QGIINFEQKESNG--PVKVWGSIKGLTEGLHGFRV-QE 48 usage_01431.pdb 1 ATKKAVAVLKGNS-----NV--EGVVTLSQDD-DG--PTTVNVRITGLAPGLHGFHL-HE 49 usage_01432.pdb 1 ATKKAVAVLKGNS-----NV--EGVVTLSQDD-DG--PTTVNVRITGLAPGLHGFHL-HE 49 v G L G hgf usage_00025.pdb 52 N 52 usage_00035.pdb 49 F 49 usage_00398.pdb - usage_00441.pdb 49 F 49 usage_00453.pdb 47 F 47 usage_00740.pdb 49 F 49 usage_01431.pdb 50 Y 50 usage_01432.pdb 50 Y 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################