################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:11 2021 # Report_file: c_0577_20.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00093.pdb # 2: usage_00094.pdb # 3: usage_00104.pdb # 4: usage_00131.pdb # 5: usage_00134.pdb # # Length: 76 # Identity: 10/ 76 ( 13.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 76 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 76 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00093.pdb 1 -VTLFSNKDDIYCHQVKIVLAEKGVLYENAEV-DLQALPEDL-ELNPYGTVPTLVDRDLV 57 usage_00094.pdb 1 -VTLFSNKDDIYCHQVKIVLAEKGVLYENAEV-DLQALPEDL-ELNPYGTVPTLVDRDLV 57 usage_00104.pdb 1 -LILYDYFRSTACYRVRIALNLKKIAYEKIEVE----------------LVPSLDINGQI 43 usage_00131.pdb 1 VMTLFSGPTDIFSHQVRIVLAEKGVSVEIEQV-EADNLPQDLIDLNPYRTVPTLVDRELT 59 usage_00134.pdb 1 -LACYSDPADHYSHRVRLVLAEKGVSVQLIDV-DPAHLPRKLAEVNPYGSVPTLVDRDLA 58 l s d h V ivLaeKgv e V VPtLvdr l usage_00093.pdb 58 LFNSRIIEYLDE-RFP 72 usage_00094.pdb 58 LFNSRIIEYLDE-RFP 72 usage_00104.pdb 44 LSQSAIIDYLEE-IHP 58 usage_00131.pdb 60 LYESRIIMEYLDERFP 75 usage_00134.pdb 59 LYESTVVEYLEE-RYP 73 L S ii yl e r P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################