################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:22:30 2021 # Report_file: c_1491_191.html ################################################################################################ #==================================== # Aligned_structures: 23 # 1: usage_00784.pdb # 2: usage_00788.pdb # 3: usage_00793.pdb # 4: usage_00794.pdb # 5: usage_00795.pdb # 6: usage_00796.pdb # 7: usage_00797.pdb # 8: usage_00801.pdb # 9: usage_00802.pdb # 10: usage_00803.pdb # 11: usage_00804.pdb # 12: usage_00975.pdb # 13: usage_01759.pdb # 14: usage_01760.pdb # 15: usage_01816.pdb # 16: usage_01828.pdb # 17: usage_01829.pdb # 18: usage_01832.pdb # 19: usage_01834.pdb # 20: usage_01835.pdb # 21: usage_03154.pdb # 22: usage_03330.pdb # 23: usage_03352.pdb # # Length: 33 # Identity: 1/ 33 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 33 ( 57.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 33 ( 42.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00784.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00788.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00793.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00794.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00795.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGK- 25 usage_00796.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGKW 25 usage_00797.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGKW 25 usage_00801.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00802.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00803.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGK- 25 usage_00804.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_00975.pdb 1 SV-NWDAGTNSNGEKYNNTFVNTYAPML----- 27 usage_01759.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGK- 24 usage_01760.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_01816.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGK- 24 usage_01828.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGK- 24 usage_01829.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGK- 24 usage_01832.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGKW 25 usage_01834.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGK- 25 usage_01835.pdb 1 -YNCLGDD-------PEFSDYNRTVMRNWTGK- 24 usage_03154.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGK- 25 usage_03330.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 usage_03352.pdb 1 YYNCLGDD-------PEFSDYNRTVMRNWTGKW 26 y clgdd pefsdyNrtvmrn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################