################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:44 2021 # Report_file: c_1364_74.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00330.pdb # 4: usage_00331.pdb # 5: usage_00539.pdb # 6: usage_00926.pdb # # Length: 61 # Identity: 32/ 61 ( 52.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 61 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 61 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 ITNYAEALRQM-----------G-----PGYMYTDLATLYERAGIVKGAKGSVTQIPILS 44 usage_00019.pdb 1 ITNYAEALRQM-----------GAA-GYPGYMYTDLATLYERAGIVKGAKGSVTQIPILS 48 usage_00330.pdb 1 -TNYAEALREISAARREVPGRR----GYPGYLYTNLATLFERAGRIRGLKGSVTQIPILT 55 usage_00331.pdb 1 MTNYAEALREISAARREVPGRR----GYPGYLYTNLATLFERAGRIRGLKGSVTQIPILT 56 usage_00539.pdb 1 ITNYAEALRQM-----------G--RGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILS 47 usage_00926.pdb 1 -TNYAEALREISAARREVPGRR----GYPGYLYTNLATLFERAGRIRGLKGSVTQIPILT 55 TNYAEALR PGY YT LATL ERAG G KGSVTQIPIL usage_00018.pdb 45 M 45 usage_00019.pdb - usage_00330.pdb - usage_00331.pdb - usage_00539.pdb - usage_00926.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################