################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:46 2021 # Report_file: c_0458_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00115.pdb # 2: usage_00116.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00175.pdb # 6: usage_00176.pdb # # Length: 89 # Identity: 21/ 89 ( 23.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 89 ( 23.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 89 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 MLTIYGVYRS-RASRNYWMAGELGLPFRSVPVVQAHRVADPLAADAPLNTKSPGFLAINP 59 usage_00116.pdb 1 -LTIYGVYRS-RASRNYWMAGELGLPFRSVPVVQAHRVADPLAADAPLNTKSPGFLAINP 58 usage_00140.pdb 1 SLKIYGVYRS-RASRPLWLLAELDLPFEHVPVIQANRVAHPHGPEAPLNTASAAYLAVNP 59 usage_00141.pdb 1 -LKIYGVYRS-RASRPLWLLAELDLPFEHVPVIQANRVAHPH--EAPLNTASAAYLAVNP 56 usage_00175.pdb 1 -LHILGKIPSINVRKVLWLCTELNLPFEQEDWG------------------DPAYLALNP 41 usage_00176.pdb 1 -LHILGKIPSINVRKVLWLCTELNLPFEQEDWGA--GF--------R-TTNDPAYLALNP 48 L I G S W EL LPF LA NP usage_00115.pdb 60 MGLIPAIEDDGLVLTESLANNLYLARK-- 86 usage_00116.pdb 59 MGLIPAIEDDGLVLTESLANNLYLARK-- 85 usage_00140.pdb 60 LGQIPCLEEEGLILTESLAITLHIARTQG 88 usage_00141.pdb 57 LGQIPCLEEEGLILTESLAITLHIART-- 83 usage_00175.pdb 42 NGLVPVIKDDGFVLWESNTIIRYLANR-- 68 usage_00176.pdb 49 NGLVPVIKDDGFVLWESNTIIRYLANRYG 77 G P G L ES A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################