################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:52:53 2021 # Report_file: c_1113_100.html ################################################################################################ #==================================== # Aligned_structures: 35 # 1: usage_00052.pdb # 2: usage_00053.pdb # 3: usage_00054.pdb # 4: usage_00155.pdb # 5: usage_00156.pdb # 6: usage_00157.pdb # 7: usage_00278.pdb # 8: usage_00279.pdb # 9: usage_00280.pdb # 10: usage_00290.pdb # 11: usage_00291.pdb # 12: usage_00292.pdb # 13: usage_00464.pdb # 14: usage_00488.pdb # 15: usage_00493.pdb # 16: usage_00517.pdb # 17: usage_00518.pdb # 18: usage_00519.pdb # 19: usage_00534.pdb # 20: usage_00535.pdb # 21: usage_00536.pdb # 22: usage_00537.pdb # 23: usage_00538.pdb # 24: usage_00539.pdb # 25: usage_00545.pdb # 26: usage_00546.pdb # 27: usage_00547.pdb # 28: usage_00637.pdb # 29: usage_00659.pdb # 30: usage_00993.pdb # 31: usage_00994.pdb # 32: usage_00995.pdb # 33: usage_00996.pdb # 34: usage_00997.pdb # 35: usage_00998.pdb # # Length: 110 # Identity: 50/110 ( 45.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/110 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/110 ( 31.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00052.pdb 1 --GTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 58 usage_00053.pdb 1 --GTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 58 usage_00054.pdb 1 --GTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 58 usage_00155.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00156.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00157.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00278.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00279.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00280.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00290.pdb 1 MDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSV 60 usage_00291.pdb 1 MDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSV 60 usage_00292.pdb 1 MDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSV 60 usage_00464.pdb 1 MDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00488.pdb 1 MDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00493.pdb 1 MDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00517.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00518.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00519.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00534.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00535.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00536.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00537.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00538.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00539.pdb 1 -DGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 59 usage_00545.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00546.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00547.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSV 60 usage_00637.pdb 1 MDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSV 60 usage_00659.pdb 1 MDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSV 60 usage_00993.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00994.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00995.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00996.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00997.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 usage_00998.pdb 1 MDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV 60 GTALYQGV F ANA G LT GQQL VLTAVLASIGTAGVPGAGAIML MVL SV usage_00052.pdb 59 GLPLTD--PNVAAAYAMILGI-D--------------------------- 78 usage_00053.pdb 59 GLPLTD--PNVAAAYAMILGI-D--------------------------- 78 usage_00054.pdb 59 GLPLTD--PNVAAAYAMILGI-D--------------------------- 78 usage_00155.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00156.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00157.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00278.pdb 61 GLPLTD--PNVAAAYACILGI-D--------------------------- 80 usage_00279.pdb 61 GLPLTD--PNVAAAYACILGI-D--------------------------- 80 usage_00280.pdb 61 GLPLTD--PNVAAAYACILGI-D--------------------------- 80 usage_00290.pdb 61 GLDLT-PGSPVALAYAMILGI-D--------------------------- 81 usage_00291.pdb 61 GLDLT-PGSPVALAYAMILGI-D--------------------------- 81 usage_00292.pdb 61 GLDLT-PGSPVALAYAMILGI-D--------------------------- 81 usage_00464.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00488.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00493.pdb 61 GLPLTD--PNVAAAYAMILG------------------------------ 78 usage_00517.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00518.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00519.pdb 61 GLPLTD--PNVAAAYAMILGI-D--------------------------- 80 usage_00534.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00535.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00536.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00537.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00538.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00539.pdb 60 GLPLTD--PNVAAAYAMILGI-D--------------------------- 79 usage_00545.pdb 61 GLPLTD--PNVAAAYAMILGI-DAILDMGRTMVNVTGDLTGTAIVAKTEG 107 usage_00546.pdb 61 GLPLTD--PNVAAAYAMILGI-DAILDMGRTMVNVTGDLTGTAIVAKTE- 106 usage_00547.pdb 61 GLPLTD--PNVAAAYAMILGI-DAILDMGRTMVNVTGDLTGTAIVAKTE- 106 usage_00637.pdb 61 GLDLT-PGSPVALAYAMILGI-D--------------------------- 81 usage_00659.pdb 61 GLDLTP--GSPVALAYAMILGID--------------------------- 81 usage_00993.pdb 61 GLPLTD--PNVCAAYAMILGI-D--------------------------- 80 usage_00994.pdb 61 GLPLTD--PNVCAAYAMILGI-D--------------------------- 80 usage_00995.pdb 61 GLPLTD--PNVCAAYAMILGI-DA-------------------------- 81 usage_00996.pdb 61 GLPLTD--PNVCAAYAMILGI-D--------------------------- 80 usage_00997.pdb 61 GLPLTD--PNVCAAYAMILGI-D--------------------------- 80 usage_00998.pdb 61 GLPLTD--PNVCAAYAMILGI-DA-------------------------- 81 GL LT v aya ilg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################