################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:15 2021 # Report_file: c_0461_35.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00168.pdb # 2: usage_00346.pdb # 3: usage_00355.pdb # 4: usage_00364.pdb # 5: usage_00365.pdb # 6: usage_00617.pdb # 7: usage_00634.pdb # 8: usage_00787.pdb # 9: usage_01025.pdb # 10: usage_01034.pdb # 11: usage_01213.pdb # # Length: 93 # Identity: 3/ 93 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 93 ( 9.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 93 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00168.pdb 1 --EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-PDLVLLD-M-KIP 55 usage_00346.pdb 1 --EKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-PDLVLLD-M-KIP 55 usage_00355.pdb 1 SLQQALIVEDYQAAAETFKELLEMLGFQADYVMSGTDALHAMSTRG-YDAVFID-L-NLP 57 usage_00364.pdb 1 ---KILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-PDLVLLD-M-KIP 54 usage_00365.pdb 1 --EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-PDLVLLD-M-KIP 55 usage_00617.pdb 1 ---RILLVDDDYSLLNTLKRNLSFD-FEVTTCESGPEALACIKKSDPFSVIV--DRP--- 51 usage_00634.pdb 1 --KRILVVDDEPNIRELLKEELQEEGYEIDTAENGEEALKKFFSGN-YDLVILD-I-E-P 54 usage_00787.pdb 1 --KKILIIDQQDFSRIELKNFLDSE-YLVIESKNEKEALEQIDHHH-PDLVI-------- 48 usage_01025.pdb 1 --EKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-PDLVLLD-M-KIP 55 usage_01034.pdb 1 ---RVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETR-PDAVILD-VP--- 52 usage_01213.pdb 1 --NKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLD-DS-IDLLLLD-V-MMP 54 L vdd l g AL d usage_00168.pdb 56 GMDGI----EILKRMKVI--DE--NIRVIIMTA 80 usage_00346.pdb 56 GMDGI----EILKRMKVI--DE--NIRVII--- 77 usage_00355.pdb 58 DTSGL----ALVKQLRAL--PMEKTSKFVAVS- 83 usage_00364.pdb 55 GMDGI----EILKRMKVI--DE--NIRVIIMT- 78 usage_00365.pdb 56 GMDGI----EILKRMKVI--DE--NIRVIIMT- 79 usage_00617.pdb 52 -GEGT----EVIQKARLI--SP--NSVYLLT-- 73 usage_00634.pdb 55 GISGL----EVAGEIRKK--KK--DAKIILLT- 78 usage_00787.pdb 49 -----LDDINLCLKLKRSKGLK--NVPLILLF- 73 usage_01025.pdb 56 GMDGI----EILKRMKVI--DE--NIRVIIMT- 79 usage_01034.pdb 53 -GDGF----GVLRRLRAD--GI--DAPALF--- 73 usage_01213.pdb 55 KKNGI----DTLKALRQT--H---QTPVIMLT- 77 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################