################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:46:46 2021 # Report_file: c_0124_1.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00035.pdb # 4: usage_00036.pdb # 5: usage_00037.pdb # 6: usage_00038.pdb # 7: usage_00051.pdb # 8: usage_00052.pdb # # Length: 252 # Identity: 106/252 ( 42.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 106/252 ( 42.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/252 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 usage_00034.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 usage_00035.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 usage_00036.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 usage_00037.pdb 1 GNFLCYGDLPTGASLDPATFLFPRGAILDRDLSTIHEVDLEATGEIQEFVNHSWYEYSVG 60 usage_00038.pdb 1 GNFLCYGDLPTGASLDPATFLFPRGAILDRDLSTIHEVDLEATGEIQEFVNHSWYEYSVG 60 usage_00051.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 usage_00052.pdb 1 -NVMDYGAYPKT-PYDKSTDQLPGGAIINGDWGKIHPVDPRDPEQVQEFVTHSWYKYPD- 57 N YG P D T P GAI D IH VD QEFV HSWY Y usage_00033.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 usage_00034.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 usage_00035.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 usage_00036.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 usage_00037.pdb 61 NDRGLHPYEGQTNLEYD--------RRGGVAPPYKQLDVSDGYSWLKAPRWKGRSVEVGP 112 usage_00038.pdb 61 NDRGLHPYEGQTNLEYD--------RRGGVAPPYKQLDVSDGYSWLKAPRWKGRSVEVGP 112 usage_00051.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 usage_00052.pdb 58 ETKGLHPWDGITEPNYELGSKTKGS-----RTNIIEIDESAKYSWIKSPRWRGHAVEVGP 112 GLHP G T Y D S YSW K PRW G VEVGP usage_00033.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 usage_00034.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 usage_00035.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 usage_00036.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 usage_00037.pdb 113 LARVLMLYATGHDQARELVDSTLSRLD-------------L-PVDALYSTLGRTAARALE 158 usage_00038.pdb 113 LARVLMLYATGHDQARELVDSTLSRLD-------------L-PVDALYSTLGRTAARALE 158 usage_00051.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 usage_00052.pdb 113 LARYILAYAQGVEYVKTQVHTSLNRFNAVCRLLDPNHKDITDLKAFLGSTIGRTLARALE 172 LAR YA G V L R L ST GRT ARALE usage_00033.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 usage_00034.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 usage_00035.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 usage_00036.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 usage_00037.pdb 159 SKILVDAMQGWYDGLIANVKSGDTKTFNETLWEPSSWPSRAQGVGIMEAPRGALGHWIVI 218 usage_00038.pdb 159 SKILVDAMQGWYDGLIANVKSGDTKTFNETLWEPSSWPSRAQGVGIMEAPRGALGHWIVI 218 usage_00051.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 usage_00052.pdb 173 SEYCGDMMLDDFNQLISNIKNGDSSTANTDKWDPSSWPEHAKGVGTVAAPRGALAHWIVI 232 S D M LI N K GD T N W PSSWP A GVG APRGAL HWIVI usage_00033.pdb 233 EKGKIKNYQCVV 244 usage_00034.pdb 233 EKGKIKNYQCVV 244 usage_00035.pdb 233 EKGKIKNYQCVV 244 usage_00036.pdb 233 EKGKIKNYQCVV 244 usage_00037.pdb 219 EDGRIANYQAVV 230 usage_00038.pdb 219 EDGRIANYQAVV 230 usage_00051.pdb 233 EKGKIKNYQCVV 244 usage_00052.pdb 233 EKGKIKNYQCVV 244 E G I NYQ VV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################