################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:58:29 2021 # Report_file: c_0212_2.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00019.pdb # 2: usage_00071.pdb # 3: usage_00116.pdb # 4: usage_00146.pdb # 5: usage_00149.pdb # 6: usage_00168.pdb # 7: usage_00169.pdb # 8: usage_00184.pdb # 9: usage_00196.pdb # 10: usage_00197.pdb # 11: usage_00198.pdb # 12: usage_00199.pdb # 13: usage_00202.pdb # 14: usage_00205.pdb # 15: usage_00235.pdb # 16: usage_00347.pdb # 17: usage_00351.pdb # 18: usage_00380.pdb # # Length: 95 # Identity: 34/ 95 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 95 ( 47.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 95 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00071.pdb 1 --VTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGAGNLQIGDVP 58 usage_00116.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00146.pdb 1 --VTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVP 58 usage_00149.pdb 1 --VTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVP 58 usage_00168.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00169.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00184.pdb 1 -AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00196.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00197.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00198.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00199.pdb 1 -AVTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 usage_00202.pdb 1 -GITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEVS 59 usage_00205.pdb 1 AAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIP 60 usage_00235.pdb 1 --VTQNPRYLITVTGKELTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVP 58 usage_00347.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDIP 59 usage_00351.pdb 1 -GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVP 59 usage_00380.pdb 1 -AVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIP 59 vTQ Pr TG T C Q nH M WYRQD G GLR I YS t kG p usage_00019.pdb 60 DGYKASRPSQENFSLILELATPSQTSVYFCAS--- 91 usage_00071.pdb 59 DGYKATRTTQEDFFLLLELASPSQTSLYFCASSD- 92 usage_00116.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCAS--- 91 usage_00146.pdb 59 EGYKVSRKEKRNFPLILESPSPNQTSLYFCASSG- 92 usage_00149.pdb 59 EGYKVSRKEKRNFPLILESPSPNQTSLYFCASSGA 93 usage_00168.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCAS--- 91 usage_00169.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCAS--- 91 usage_00184.pdb 60 DGYKASRPSQENFSLILELATPSQTSVYFCASGGG 94 usage_00196.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCASGGG 94 usage_00197.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCASGGG 94 usage_00198.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCASGGG 94 usage_00199.pdb 60 DGYKASRPSQEQFSLILELATPSQTSVYFCASGGG 94 usage_00202.pdb 60 DGYSVSRSKTEDFLLTLESATSSQTSVYFCATGT- 93 usage_00205.pdb 61 DGYKASRPSQENFSLILELASLSQTAVYFCASSD- 94 usage_00235.pdb 59 EGYKVSRKEKRNFPLILESPSPNQTSLYFCASSL- 92 usage_00347.pdb 60 DGYEASRPSQEQFSLILVSATPSQSSVYFCAS--- 91 usage_00351.pdb 60 NGYNVSRLNKREFSLRLESAAPSQTSVYFCASPGE 94 usage_00380.pdb 60 DGYKASRPSQEQFSLILESATPSQTSVYFCAS--- 91 GY sR F L Le Qts YFCAs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################