################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:13 2021 # Report_file: c_0994_53.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00003.pdb # 2: usage_00010.pdb # 3: usage_00240.pdb # 4: usage_00248.pdb # 5: usage_00249.pdb # 6: usage_00310.pdb # 7: usage_00311.pdb # 8: usage_00325.pdb # 9: usage_00346.pdb # 10: usage_00446.pdb # 11: usage_00508.pdb # 12: usage_00538.pdb # 13: usage_00613.pdb # 14: usage_00634.pdb # 15: usage_00644.pdb # 16: usage_00652.pdb # 17: usage_00653.pdb # 18: usage_00665.pdb # 19: usage_00720.pdb # 20: usage_00774.pdb # 21: usage_00838.pdb # 22: usage_00875.pdb # 23: usage_00887.pdb # 24: usage_00904.pdb # 25: usage_00905.pdb # 26: usage_01059.pdb # 27: usage_01106.pdb # 28: usage_01129.pdb # # Length: 48 # Identity: 7/ 48 ( 14.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 48 ( 45.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 48 ( 14.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYS 46 usage_00010.pdb 1 ----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 44 usage_00240.pdb 1 ----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 44 usage_00248.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00249.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00310.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00311.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00325.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00346.pdb 1 ----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 44 usage_00446.pdb 1 --MQIFVKT--GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 44 usage_00508.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00538.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00613.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00634.pdb 1 --MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIY- 45 usage_00644.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00652.pdb 1 --LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF- 45 usage_00653.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00665.pdb 1 --MQIFVKTLTGSTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00720.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00774.pdb 1 IQMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 48 usage_00838.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00875.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00887.pdb 1 --GQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00904.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_00905.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_01059.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 usage_01106.pdb 1 --MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF- 45 usage_01129.pdb 1 ----ILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSF- 43 I Vkt G i ep d e K kEgipp QqrLi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################