################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:44 2021 # Report_file: c_0516_6.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00080.pdb # 2: usage_00131.pdb # 3: usage_00132.pdb # 4: usage_00133.pdb # 5: usage_00134.pdb # 6: usage_00135.pdb # 7: usage_00182.pdb # 8: usage_00269.pdb # 9: usage_00275.pdb # # Length: 109 # Identity: 78/109 ( 71.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 78/109 ( 71.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/109 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00080.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00131.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00132.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00133.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00134.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00135.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00182.pdb 1 PEENALRSLIASARSHVEISQQDLNATCPPLPRYDIRTYDTLAGKLAAGVKVRIVVSDPA 60 usage_00269.pdb 1 PEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPA 60 usage_00275.pdb 1 -EENALRSLIASARSHVEISQQDLNATCPPLPRYDIRTYDTLAGKLAAGVKVRIVVSDPA 59 EE ALR L ASA H EISQQDLNATCPPLPRYDIR YD LA K AAGVKVRIVVSDPA usage_00080.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00131.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00132.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00133.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00134.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00135.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00182.pdb 61 NRGAVGSGGYSQIKSLDEISDTLRTRLVALTGDNEKASRALCGNLQLAS 109 usage_00269.pdb 61 NR------GYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLAT 103 usage_00275.pdb 60 NRGAVGSGGYSQIKSLDEISDTLRTRLVALTGDNEKASRALCGNLQLAS 108 NR GYSQIKSL EISDTLR RL TG A A C NLQLA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################