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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:37:13 2021
# Report_file: c_0728_6.html
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#====================================
# Aligned_structures: 7
#   1: usage_00099.pdb
#   2: usage_00100.pdb
#   3: usage_00143.pdb
#   4: usage_00214.pdb
#   5: usage_00216.pdb
#   6: usage_00218.pdb
#   7: usage_00220.pdb
#
# Length:         88
# Identity:       11/ 88 ( 12.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     35/ 88 ( 39.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           19/ 88 ( 21.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00099.pdb         1  --EMLETDTFKLHCYQTLTGIKFVVLADP--------RQAGIDSLLRKIYEIYSDFALKN   50
usage_00100.pdb         1  ---VDKFNEWFVSAFVTAGHMRFIMLHDV----RQED---GIKNFFTDVYDLYIKF-AMN   49
usage_00143.pdb         1  GIEMLETDTFKLHCYQTLTGIKFVVLADP--------RQAGIDSLLRKIYEIYSDFALKN   52
usage_00214.pdb         1  --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD   54
usage_00216.pdb         1  --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD   54
usage_00218.pdb         1  --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD   54
usage_00220.pdb         1  --RQLCTDQFTMFIYQTLTGLKFVAISSSVMNL-AIQ---IADNFLRKVYCLYSDYVMKD   54
                               l td f    yqTltg kFv                  d  lrk Y  Ysd   k 

usage_00099.pdb        51  PFYSLEMPIRCELFDQNLKLALEVAEKA   78
usage_00100.pdb        50  PFYEPNSPIRSSAFDRKVQFLGKK----   73
usage_00143.pdb        53  PFYSLEMPIRCELFDQNLKLALEVA---   77
usage_00214.pdb        55  PSYSMEMPIRSNLFDEKVKKMVENLQ--   80
usage_00216.pdb        55  PSYSMEMPIRSNLFDEKVKKMVENLQ--   80
usage_00218.pdb        55  PSYSMEMPIRSNLFDEKVKKMVENLQ--   80
usage_00220.pdb        55  PSYSMEMPIRSNLFDEKVKKMVENLQ--   80
                           P Ys emPIR  lFD   k   e     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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