################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:16:38 2021 # Report_file: c_0715_43.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00103.pdb # 2: usage_00115.pdb # 3: usage_00200.pdb # 4: usage_00201.pdb # 5: usage_00405.pdb # # Length: 66 # Identity: 17/ 66 ( 25.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 66 ( 31.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 66 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 -----VHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDS 55 usage_00115.pdb 1 -TTRTCAVPTPYGDVTTRLYSPQPT-SQATLYYLHGGGFILGNLDTHDRI-RLLARYTGC 57 usage_00200.pdb 1 MATRAYMVPTKYGQVETRLFCPQPD-SPATLFYLHGGGFILGNLDTHDRIMRLLASYSQC 59 usage_00201.pdb 1 -ATRAYMVPTKYGQVETRLFCPQPD-SPATLFYLHGGGFILGNLDTHDRIMRLLASYSQC 58 usage_00405.pdb 1 HRVEDITIPGRGGPIRARVYRPRDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGA 60 P G R P Y HGGGF lG THD i R La s usage_00103.pdb 56 VVVSVD 61 usage_00115.pdb 58 TVIGID 63 usage_00200.pdb 60 TVIGID 65 usage_00201.pdb 59 TVIGID 64 usage_00405.pdb 61 VVVSV- 65 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################