################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:55 2021 # Report_file: c_1200_523.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00566.pdb # 2: usage_00608.pdb # 3: usage_02250.pdb # 4: usage_02513.pdb # # Length: 56 # Identity: 0/ 56 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 56 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 56 ( 60.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00566.pdb 1 S----VTVFDNRGLSVRDIAYRRH-P----------DTPK---VTEECITYHQFD- 37 usage_00608.pdb 1 -SFNFGSD-------GYLYFDCNQLHHSAPLNAGENI---SAPPYYIFRLK----- 40 usage_02250.pdb 1 -RTTVFGSYD-A---NYILAAQRR-TVHL---DGP-SGQGVS-RERIWHIRA---K 42 usage_02513.pdb 1 -RTTVFGSYD-A---NYILAAQRR-TVHL---DGP-SGQGVS-RERIWHIRA---K 42 y a r i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################