################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:35:37 2021 # Report_file: c_0254_8.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00006.pdb # 5: usage_00007.pdb # 6: usage_00072.pdb # 7: usage_00132.pdb # # Length: 116 # Identity: 34/116 ( 29.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/116 ( 43.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/116 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 MKRVTEPLKSMGAQIDGRDHG-NLTPLSIRG-GQLKGIDFHSPVASAQMKSAILLAGLRA 58 usage_00003.pdb 1 MKRVTEPLKSMGAQIDGRDHG-NLTPLSIRG-GQLKGIDFHSPVASAQMKSAILLAGLRA 58 usage_00005.pdb 1 MKRVTEPLKSMGAQIDGRDHG-NLTPLSIRG-GQLKGIDFHSPVASAQMKSAILLAGLRA 58 usage_00006.pdb 1 MKRVTEPLKSMGAQIDGRDHG-NLTPLSIRG-GQLKGIDFHSPVASAQMKSAILLAGLRA 58 usage_00007.pdb 1 -KRIIDPLTLMGAKIDSTG---NVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYA 56 usage_00072.pdb 1 MGRVLNPLREMGVQVKSED--GDRLPVTLRGPKTPTPITYRVPMASAQVKSAVLLAGLNT 58 usage_00132.pdb 1 MKRIIDPLTLMGAKIDSTG---NVPPLKIYGNPRLTGIHYQL-PASAQVKSCLLLAGLYA 56 kR PL MGa id n Pl i G l gI ASAQ KS LLAGL a usage_00001.pdb 59 EGKTSVTEPAKTRDHTERMLEAFGVNIEKDG-----LTVSIEGGQMLTGQHVVVPG 109 usage_00003.pdb 59 EGKTSVTEPAKTRDHTERMLEAFGVNIEKDG-----LTVSIEGGQMLTGQHVVVPG 109 usage_00005.pdb 59 EGKTSVTEPAKTRDHTERMLEAFGVNIEKDG-----LTVSIEGGQMLTGQHVVVPG 109 usage_00006.pdb 59 EGKTSVTEPAKTRDHTERMLEAFGVNIEKDG-----LTVSIEGGQMLTGQHVVVPG 109 usage_00007.pdb 57 RGKTCITEPAPSRDHTERLLKHFHYTLQKDK-----QSICVSGGGKLKANDISIPG 107 usage_00072.pdb 59 PGITTVIEPIMTRDHTEKMLQGFGANLTVETDADGVRTIRLEGRGKLTGQVIDVPG 114 usage_00132.pdb 57 RGKTCITEPAPSRDHTERLLKHFHYTLQK---------ICVSGGGKLKANDISIPG 103 GkT tEPa RDHTEr L F k Gg L PG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################