################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:18 2021 # Report_file: c_1218_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00043.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00046.pdb # 5: usage_00315.pdb # 6: usage_00483.pdb # 7: usage_00484.pdb # 8: usage_00623.pdb # 9: usage_00624.pdb # 10: usage_00625.pdb # 11: usage_00626.pdb # 12: usage_00627.pdb # # Length: 73 # Identity: 2/ 73 ( 2.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 73 ( 13.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 73 ( 30.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00043.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRY-- 57 usage_00044.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYI- 58 usage_00045.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00046.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00315.pdb 1 -ADVPVAILPR--T-REITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRK---- 52 usage_00483.pdb 1 --QLALALLPA--S-GQIALLEMDARLHEDHLERVLEAAAQAARDVHTLLDRVVRQHVRE 55 usage_00484.pdb 1 RAVLTFALDSV--E-RKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYS- 56 usage_00623.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00624.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00625.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00626.pdb 1 -ADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 59 usage_00627.pdb 1 EADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 60 A l i ll dg e A e usage_00043.pdb ------------- usage_00044.pdb ------------- usage_00045.pdb 60 VGEEMDEIT---- 68 usage_00046.pdb 60 VGEEMD---EITE 69 usage_00315.pdb ------------- usage_00483.pdb 56 AS----------- 57 usage_00484.pdb ------------- usage_00623.pdb 60 VGEEMD---E--- 66 usage_00624.pdb 60 VGEEMD---EITE 69 usage_00625.pdb 60 VGEEMD---EITE 69 usage_00626.pdb 60 VGEEMD---E--- 66 usage_00627.pdb 61 VGEEMD---EITE 70 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################