################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:33:59 2021 # Report_file: c_0032_4.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00023.pdb # 2: usage_00024.pdb # 3: usage_00069.pdb # 4: usage_00077.pdb # 5: usage_00078.pdb # 6: usage_00079.pdb # 7: usage_00122.pdb # # Length: 202 # Identity: 89/202 ( 44.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 170/202 ( 84.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/202 ( 10.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 ----PVLTSSILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDTLEGKPKAVVTH 56 usage_00024.pdb 1 ----PVLTSSILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDTLEGKPKAVVTH 56 usage_00069.pdb 1 ----PVMSSTSIDAMVGKKLFFKCECFQKAGAFKIRGASNSIFALD-DEQ--VSKGVVTH 53 usage_00077.pdb 1 ----PVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLV----R-KPKAVVTH 51 usage_00078.pdb 1 ----PVLTSSILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDTLEGKPKAVVTH 56 usage_00079.pdb 1 VHLTPVLTSSILNQIAGRNLFFKCELFQKTGSFKIRGALNAIR-G--------PKAVVTH 51 usage_00122.pdb 1 ----PVLTSSILNQLTGRNLFFKCELFQKTGSF-IRGALNAVRSLV-------PKAVVTH 48 PVltSsilnq GrnLFFKCElFQKtGsF IRGAlNa r l pKaVVTH usage_00023.pdb 57 SSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRI 116 usage_00024.pdb 57 SSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRI 116 usage_00069.pdb 54 SSGNHAAAVALAAKLRGIPAHIVIPR--A-SKVENVKCYGGHIIWSDASIESREYVSKRV 110 usage_00077.pdb 52 SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENVAKRV 111 usage_00078.pdb 57 SSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRI 116 usage_00079.pdb 52 SSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRI 111 usage_00122.pdb 49 SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENVAKRV 108 SSGNHgqAltyAAKLeGIPAyIVvPq p cKklaiqaYGasIvy epSdESREnVa R usage_00023.pdb 117 IQETEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKTLKP 176 usage_00024.pdb 117 IQETEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKTLKP 176 usage_00069.pdb 111 QEETGAVLIHPINSKYTISGQGTVSLELLEQVPEIDTIIVPISGGGLISGVALAAKAINP 170 usage_00077.pdb 112 TEETEGIMVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKP 171 usage_00078.pdb 117 IQETEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKTLKP 176 usage_00079.pdb 112 IQETEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKTLKP 171 usage_00122.pdb 109 TEETEGI-VHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGG-LAGIAITVKALKP 166 ETegi vHPnqepavIaGQGTiaLEvLnQVPlvDalvVPvgGGG aGiAit K lkP usage_00023.pdb 177 SVKVYAAEPSNADDCYQSKL-- 196 usage_00024.pdb 177 SVKVYAAEPSNADDCYQSKL-- 196 usage_00069.pdb 171 SIRILAAEPKGADDSAQSKAA- 191 usage_00077.pdb 172 SVKVYAAEPSNADDCYQSKLK- 192 usage_00078.pdb 177 SVKVYAAEPSNADDCYQSKLKG 198 usage_00079.pdb 172 SVKVYAAEPSNADDCYQSKL-- 191 usage_00122.pdb 167 SVKVYAAEPSNADDCYQSKLK- 187 SvkvyAAEPsnADDcyQSKl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################