################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:10:00 2021 # Report_file: c_0190_5.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00033.pdb # 5: usage_00034.pdb # 6: usage_00035.pdb # 7: usage_00052.pdb # 8: usage_00053.pdb # 9: usage_00056.pdb # 10: usage_00057.pdb # 11: usage_00058.pdb # 12: usage_00059.pdb # 13: usage_00071.pdb # 14: usage_00072.pdb # 15: usage_00093.pdb # 16: usage_00094.pdb # 17: usage_00096.pdb # 18: usage_00097.pdb # 19: usage_00102.pdb # # Length: 217 # Identity: 99/217 ( 45.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 99/217 ( 45.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/217 ( 27.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 NEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIYTQGLVDKYRGKRRAEMPPHLFS 60 usage_00029.pdb 1 NEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIYTQGLVDKYRGKRRAEMPPHLFS 60 usage_00030.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00033.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00034.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00035.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00052.pdb 1 -DASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFA 59 usage_00053.pdb 1 -DASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFA 59 usage_00056.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00057.pdb 1 -EASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 59 usage_00058.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00059.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00071.pdb 1 ---AVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFS 57 usage_00072.pdb 1 ---AVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFS 57 usage_00093.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00094.pdb 1 NEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFS 60 usage_00096.pdb 1 ---AVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFS 57 usage_00097.pdb 1 ---AVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFS 57 usage_00102.pdb 1 ---AVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFS 57 L NL RY IYTYSGLFC NPY P YT Y G E PPH F usage_00028.pdb 61 IADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVA-ASLA------------ 107 usage_00029.pdb 61 IADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVA-ASLA------------ 107 usage_00030.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----V---------- 106 usage_00033.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKV------------------ 102 usage_00034.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKV------------------ 102 usage_00035.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKV------------------ 102 usage_00052.pdb 60 ISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAA----TP--------- 106 usage_00053.pdb 60 ISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAA----TP--------- 106 usage_00056.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----VKKKEEASD-- 114 usage_00057.pdb 60 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA---V----------- 105 usage_00058.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----V---------- 106 usage_00059.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----V---------- 106 usage_00071.pdb 58 ISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIA-A----IG-------DR 105 usage_00072.pdb 58 ISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIA-A----IG-------DR 105 usage_00093.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----V---------- 106 usage_00094.pdb 61 VADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACA----VK--------- 107 usage_00096.pdb 58 ISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIA-A----IG-------D- 104 usage_00097.pdb 58 ISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIA-A----IG-------D- 104 usage_00102.pdb 58 ISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIA-A----IG-------D- 104 D AY M RENQS LITGESGAGKT NTK VI Y A usage_00028.pdb 108 ------G---------KG-TLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQ 151 usage_00029.pdb 108 ------G---------KG-TLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQ 151 usage_00030.pdb 107 -----------------G-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 148 usage_00033.pdb 103 ---------------------EDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 141 usage_00034.pdb 103 ---------------------EDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 141 usage_00035.pdb 103 ---------------------EDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 141 usage_00052.pdb 107 -KP-----GKEAPTKEKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPM 160 usage_00053.pdb 107 -KPG----KEAPTK-EKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPM 160 usage_00056.pdb 115 K----------------G-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 157 usage_00057.pdb 106 -----------------G-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 147 usage_00058.pdb 107 -------K-------KEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 151 usage_00059.pdb 107 ---------------KEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 150 usage_00071.pdb 106 S--QSPG---------KG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 153 usage_00072.pdb 106 ----SPG---------KG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 151 usage_00093.pdb 107 ----------------EG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 149 usage_00094.pdb 108 -------K-------KEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPT 152 usage_00096.pdb 105 -----PG---------KG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 149 usage_00097.pdb 105 -----PG---------KG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 149 usage_00102.pdb 105 -----RG---------KG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 149 EDQ Q NP LEA GNAKT RN NSSRFGKFIRIHFG usage_00028.pdb 152 GKIAGADIETYLLEKSRVT------------------ 170 usage_00029.pdb 152 GKIAGADIETYLLEKSRVT------------------ 170 usage_00030.pdb 149 GKIAGADIETYLLEKSRVT------------------ 167 usage_00033.pdb 142 GKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICS- 177 usage_00034.pdb 142 GKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICS- 177 usage_00035.pdb 142 GKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICS- 177 usage_00052.pdb 161 GKLAGADIETYLLEKARVIS----------------- 180 usage_00053.pdb 161 GKLAGADIETYLLEKARVI------------------ 179 usage_00056.pdb 158 GKIAGADIETYLLEKSRVT------------------ 176 usage_00057.pdb 148 GKIAGADIETYLLEKSRVT------------------ 166 usage_00058.pdb 152 GKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSN 188 usage_00059.pdb 151 GKIAGADIETYLLEKSRVT------------------ 169 usage_00071.pdb 154 GKLASADIETYLLEKSRVI------------------ 172 usage_00072.pdb 152 GKLASADIETYLLEKSRVI------------------ 170 usage_00093.pdb 150 GKIAGADIETYLLEKSRVT------------------ 168 usage_00094.pdb 153 GKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICS- 188 usage_00096.pdb 150 GKLASADIETYLLEKSRVIFQLKAERDYHIFYQILS- 185 usage_00097.pdb 150 GKLASADIETYLLEKSRVIFQLKAERDYHIFYQILS- 185 usage_00102.pdb 150 GKLASADIETYLLEKSRVIFQLKAERDYHIFYQILS- 185 GK A ADIETYLLEK RV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################