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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:03:14 2021
# Report_file: c_0031_13.html
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#====================================
# Aligned_structures: 4
#   1: usage_00007.pdb
#   2: usage_00039.pdb
#   3: usage_00101.pdb
#   4: usage_00102.pdb
#
# Length:        245
# Identity:       72/245 ( 29.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    177/245 ( 72.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/245 ( 15.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00007.pdb         1  VG--------IAPTKSSERWVADGQN-VDQFKAFGYDTDLQYGDDVVQNQVSQIEN-ITK   50
usage_00039.pdb         1  -----DLTIGSIDDLRLERWQKDRDIFVKKAESLGAKVLVQSANGDDSAQISQIEN-LNK   54
usage_00101.pdb         1  --KEVKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR   57
usage_00102.pdb         1  ---EVKIG-MAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR   56
                                      iddlrlERWqkDrdi VkkaeslGakv vQsang    Q SQIEN in 

usage_00007.pdb        51  GVKLLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANY  110
usage_00039.pdb        55  NVDVLVIIPHNGDVLSNVISEAKKEGVKVLAYDRLINNAD-LDFYVSFDNEKVGELQADA  113
usage_00101.pdb        58  GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA  116
usage_00102.pdb        57  GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA  115
                           gVdvLVIiP nG vLsNv  eAk egikVlaYDR In ad  DfY sFDNeKVGeLQA a

usage_00007.pdb       111  IVDTLGVADGKGPFNLELFAGSPDDNNATYFFQGA-SVLQPYIDSGKLVVKSGQTTFDQI  169
usage_00039.pdb       114  IIKEK-P----E-GNYFL-GGSPVDNNAKLFRKGQ-KVLQPLIDSGKIKVVG------DQ  159
usage_00101.pdb       117  LVDIV-P----Q-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG------DQ  164
usage_00102.pdb       116  LVDIV-P----Q-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG------DQ  163
                            vd   p      gNyfL gGSPvDNNAklFr Gq kVL Py DSGKikVvg      dq

usage_00007.pdb       170  ATLRWDGGLAQSR-DNLLSQAYTSG-RVDAVLSPYDGISRGVISALKSAGYGNAAKPLPI  227
usage_00039.pdb       160  WVDSWLAEKALQI-ENALTANK---NNIDAVVASNDATAGGAIQALSAQGLSG----KVA  211
usage_00101.pdb       165  WVDGWLPENALKIMENALTANN---NKIDAVVASNDATAGGAIQALSAQGLSG----KVA  217
usage_00102.pdb       164  WVDGWLPENALKIMENALTANN---NKIDAVVASNDATAGGAIQALSAQGLSG----KVA  216
                           wvd Wl e Al i eNaLtan      iDAVvasnDatagGaIqALsaqGlsg    kva

usage_00007.pdb       228  VTGQ-  231
usage_00039.pdb       212  ISGQD  216
usage_00101.pdb       218  ISGQ-  221
usage_00102.pdb       217  ISGQD  221
                           isGQ 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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