################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:15:34 2021 # Report_file: c_0158_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00015.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00081.pdb # 6: usage_00152.pdb # 7: usage_00326.pdb # 8: usage_00336.pdb # 9: usage_00393.pdb # 10: usage_00394.pdb # # Length: 149 # Identity: 27/149 ( 18.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/149 ( 22.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/149 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 -LFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWET 59 usage_00021.pdb 1 ----FRMLQTSSFANHSWAHSEGSGWLGDLQTHGWDTVLGTIRFLKPWSHGNFSKQELKN 56 usage_00022.pdb 1 --LSFHVIWIA---------NLVSGWLSDLQTHTWDSNSSTIVFLWPWSRGNFSNEEWKE 49 usage_00023.pdb 1 --LSFHVIWIASF-----KQNLVSGWLSDLQTHTWDSNSSTIVFLWPWSRGNFSNEEWKE 53 usage_00081.pdb 1 -LFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSQDSDTVRSLKPWSQGTFSD-QWET 58 usage_00152.pdb 1 --FPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWET 58 usage_00326.pdb 1 --FPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWET 58 usage_00336.pdb 1 ----FHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAE 56 usage_00393.pdb 1 --TSFHLMQISTFVNSTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTE 58 usage_00394.pdb 1 RLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWET 60 WL LQ H W s T L PWS G FS usage_00015.pdb 60 LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNAS--NNFFHVAFQGKDI 117 usage_00021.pdb 57 LQSLFQLYFHSFIRIVQASAGQFQLEYPFEIQILAGCRM-----NAPQIFLNMAYQGSDF 111 usage_00022.pdb 50 LETLFRIRTIRSFEGIRRYAHELQFEYPFEIQVTGGCELHSGKVS--GSFLQLAYQGSDF 107 usage_00023.pdb 54 LETLFRIRTIRSFEGIRRYAHELQFEYPFEIQVTGGCELHSGKVS--GSFLQLAYQGSDF 111 usage_00081.pdb 59 LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVH----S--NNFFHVAFQGKDI 112 usage_00152.pdb 59 LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEV-----S--NNFFHVAFQGKDI 111 usage_00326.pdb 59 LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHP--AS--NNFFHVAFQGKDI 114 usage_00336.pdb 57 LEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGCELHSGGAI--VSFLRGALGGLDF 114 usage_00393.pdb 59 LVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSG-AI--ESSLRGALGGLDF 115 usage_00394.pdb 61 LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNAS--NNFFHVAFQGKDI 118 L Fr a YP e Q GCe f A G D usage_00015.pdb 118 LSFQGTSWEPTQEAPLWVNLAIQVLNQDK 146 usage_00021.pdb 112 LSF---SWEPSPGAGIRAQNICKVLNRYL 137 usage_00022.pdb 108 VSFQNNSWLPYPVAGNMAKHFCKVLNQNQ 136 usage_00023.pdb 112 VSFQNNSWLPYPVAGNMAKHFCKVL---- 136 usage_00081.pdb 113 LSFQGTSWEPTQEAPLWVNLAIQVLNQDK 141 usage_00152.pdb 112 LSFQGTSWEPTQEAPLWVNLAIQVLNQDK 140 usage_00326.pdb 115 LSFQGTSWEPTQEAPLWVNLAIQVLNQ-- 141 usage_00336.pdb 115 LSVKNASCVPSPEGGSRAQKFCALIIQY- 142 usage_00393.pdb 116 VSIQNHSCVPAPDSGSRGQKFCALTTQYQ 144 usage_00394.pdb 119 LSFQGTSWEPTQEAPLWVNLAIQVLNQDK 147 S S P #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################