################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:12 2021 # Report_file: c_0374_3.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00015.pdb # 2: usage_00018.pdb # 3: usage_00033.pdb # 4: usage_00036.pdb # 5: usage_00052.pdb # 6: usage_00094.pdb # 7: usage_00102.pdb # # Length: 142 # Identity: 30/142 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/142 ( 37.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/142 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 SEDQEHYIKGVWKDVDHKQITAKALERVFVVYPWTTRLFSKLQGLF------SANDIGVQ 54 usage_00018.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGN-LYNAE-AIIGNANVA 58 usage_00033.pdb 1 TDAEKAAVNGLWGKVNPDDVGGEALGRLLVVYPWTQRYFDSFGD-LSSAS-AIMGNPKVK 58 usage_00036.pdb 1 TAEEKSLVSGLWGKVNVDEVGGEALGRLLIVYPWTQRFFDSFGD-LSTPD-AVMSNAKVK 58 usage_00052.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFS----------GAIIGNANVA 50 usage_00094.pdb 1 TDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYF-------------IMSNANVA 47 usage_00102.pdb 1 -PKEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGD-LSTPD-AVMGNPKVK 57 e d g AL R l VYPWTqR F n V usage_00015.pdb 55 QHADKVQRALGEAIDDLKKVEINFQNLSGKHQ-EIGVDTQNFKLLGQTFMVELALHYKKT 113 usage_00018.pdb 59 AHGIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHA 118 usage_00033.pdb 59 AHGKKVINAFNDGLKHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNMIVIVLGHHLGKE 118 usage_00036.pdb 59 AHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKE 118 usage_00052.pdb 51 AHGIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHA 110 usage_00094.pdb 48 AHGIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHA 107 usage_00102.pdb 58 AHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKE 117 aHg KV g dn LS lH klhVDp NF LL vLa g usage_00015.pdb 114 FRPKEHAAAYKFFRLVAEALS- 134 usage_00018.pdb 119 FTAETQGAFQKFLAVVVSALG- 139 usage_00033.pdb 119 FTPCAQAAFQKVVAGVASAL-- 138 usage_00036.pdb 119 FTPQVQAAYQKVVAGVANALA- 139 usage_00052.pdb 111 FTAETQGAFQKFLAVVVSAL-- 130 usage_00094.pdb 108 FTAETQGAFQKFLAAVVSALGK 129 usage_00102.pdb 118 FTPPVQAAYQKVVAGVANALA- 138 Ft q A qK a V AL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################