################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:06 2021 # Report_file: c_0146_11.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00098.pdb # 2: usage_00134.pdb # 3: usage_00136.pdb # 4: usage_00190.pdb # 5: usage_00214.pdb # 6: usage_00244.pdb # 7: usage_00251.pdb # 8: usage_00252.pdb # # Length: 114 # Identity: 29/114 ( 25.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/114 ( 32.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/114 ( 5.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 --VSQNPRHKITKRGQNVTFRCDPISEHNRLYWYRQTLGQGPEFLTYFQNEAQLEKSRLL 58 usage_00134.pdb 1 PKVIQTPRYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMT 60 usage_00136.pdb 1 -GVSQSPRYKVAKRGQDVALRCDPISGHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLP 59 usage_00190.pdb 1 --VLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLF 58 usage_00214.pdb 1 -GVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGN-I 58 usage_00244.pdb 1 --VTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGN-I 57 usage_00251.pdb 1 --VLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLF 58 usage_00252.pdb 1 --VLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLF 58 V Q P GQ v C P s WY Q l q FL N k usage_00098.pdb 59 SDRFSAERPKGSFSTLEIQRTEQGDSAMYLCASSSWDT-GELFFGEGSRLTVLE 111 usage_00134.pdb 61 EKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 114 usage_00136.pdb 60 SDRFFAERPEGSVSTLKIQRTQQEDSAVYLCASSLGQA-YEQYFGPGTRLTVTE 112 usage_00190.pdb 59 KDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVL- 111 usage_00214.pdb 59 LERFSAQQFPDLHSELNLSSLELGDSALYFCASSVAPGSDTQYFGPGTRLTVLE 112 usage_00244.pdb 58 LERFSAQQFPDLHSELNLSSLELGDSALYFCASSARS--GELFFGEGSRLTVLE 109 usage_00251.pdb 59 KDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE 112 usage_00252.pdb 59 KDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE 112 Fs L DSA Y CASS FG G RLtVl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################