################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:37 2021 # Report_file: c_0454_40.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00084.pdb # 5: usage_00134.pdb # 6: usage_00305.pdb # 7: usage_00361.pdb # # Length: 99 # Identity: 33/ 99 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 99 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 99 ( 4.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 --DFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNT 58 usage_00048.pdb 1 --DFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNT 58 usage_00049.pdb 1 --DFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNT 58 usage_00084.pdb 1 GVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNT 60 usage_00134.pdb 1 --NVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNT 58 usage_00305.pdb 1 NVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNT 60 usage_00361.pdb 1 -VKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNT 59 Vd d a AA T E P NP DIa A ia g vVDNT usage_00047.pdb 59 FASPMLQRPLSLGADLVVHSATYLNGHSDMVGGIAVVGD 97 usage_00048.pdb 59 FASPMLQRPLSLGADLVVHSATYLNGHSDMVGGIAVVG- 96 usage_00049.pdb 59 FASPMLQRPLSLGADLVVHSATYLNGHSDMVGGIAVVGD 97 usage_00084.pdb 61 YCTPYLQRPLELGADLVVHSATYLSGHGDITAGIVVG-- 97 usage_00134.pdb 59 FMSPYCQQPLQLGADIVVHSVTYINGHGDVIGGIIVG-- 95 usage_00305.pdb 61 FASPALQQPLSLGADVVLHSTTYIGGHSDVVGGALVTN- 98 usage_00361.pdb 60 YCTPYLQRPLELGADLVVHSATYLSGHGDITAGIVVG-- 96 P lQ PL LGAD VvHS TY GH D Gi V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################