################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:32:44 2021 # Report_file: c_0770_140.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00007.pdb # 2: usage_00170.pdb # 3: usage_00231.pdb # 4: usage_00499.pdb # 5: usage_00835.pdb # 6: usage_00925.pdb # # Length: 64 # Identity: 0/ 64 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 64 ( 3.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 64 ( 43.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 -SPILVYGH-MEPHMIVSFLGSVKAGHPYIP---VDL--SIPSERIAKIIESSGAELLI- 52 usage_00170.pdb 1 -SRVLVISD-NGPETYLSVLACAKLGAIAVM---ADG--NLPIAAIERFCQITDPAAAL- 52 usage_00231.pdb 1 RPLVLVVDD-NAVNREALILYLKSRGIDAVG---AD-----GAEEARLYLHYQKRIGLIT 51 usage_00499.pdb 1 --GLLAV-S-SGNHAQGVAYAAQVLGVKALV---VM-----P--VARALQEETGYALI-- 44 usage_00835.pdb 1 -PKLVITH-RV---HEEILQLLAPHC-ELIT---NQTDSTLTREEILRRCRDAQA--MM- 48 usage_00925.pdb 1 -SRVLVISD-NGPETYLSVLACAKLGAIAVADGN-L-----PIAAIERFCQITDPAAAL- 51 l g usage_00007.pdb 53 -HA- 54 usage_00170.pdb 53 -VAP 55 usage_00231.pdb 52 D--- 52 usage_00499.pdb 45 -HP- 46 usage_00835.pdb 49 -AF- 50 usage_00925.pdb 52 -VA- 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################