################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:21 2021 # Report_file: c_0738_25.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00195.pdb # 2: usage_00234.pdb # 3: usage_00334.pdb # 4: usage_00335.pdb # 5: usage_00457.pdb # 6: usage_00489.pdb # 7: usage_00490.pdb # 8: usage_00491.pdb # 9: usage_00508.pdb # # Length: 86 # Identity: 12/ 86 ( 14.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 86 ( 17.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 86 ( 41.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00195.pdb 1 --CLVSGWG-LLAN-GRMP---TVLQCVNVSVVSEEVCSKLY--DP-LYHPSMFCAGGGQ 50 usage_00234.pdb 1 --CHILGWG-KTAD-GDF---PDTIQCAYIHLVSREECEHAY--PG-QITQNMLCAGDEK 50 usage_00334.pdb 1 -LCTVAGWG-RVSM-RRGT---DTLREVQLRVQRDRQCLRIF--GS-YDPRRQICVGDRR 51 usage_00335.pdb 1 -SCHILGWG-KTAD-GDFP---DTIQCAYIHLVSREECEHAY--PG-QITQNMLCAGDEK 51 usage_00457.pdb 1 -SCHILGWG-KTAD-GDFP---DTIQCAYIHLVSREECEHAY--PG-QITQNMLCAGDEK 51 usage_00489.pdb 1 --CQVAGWG-T--------TANKGLTCSSITILSPKECEVFY--PG-VVTNNMICAGLDR 46 usage_00490.pdb 1 -QCQVAGWG-T-T-----------LTCSSITILSPKECEVFY--PG-VVTNNMICAGLDR 43 usage_00491.pdb 1 --CQVAGWG-T--------TANKGLTCSSITILSPKECEVFY--PG-VVTNNMICAGLDR 46 usage_00508.pdb 1 QRLTVVGWGRT--ETGQYS---TIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEK 55 c GWG C CaG usage_00195.pdb 51 --DQKDS----CNG-DSGGPLICN-- 67 usage_00234.pdb 51 ------YGKD-SCQGDSGGPLVCG-- 67 usage_00334.pdb 52 --ERKAA----FKG-DSGGPLLCN-- 68 usage_00335.pdb 52 --YGKDS----CQG-DSGGPLVCG-- 68 usage_00457.pdb 52 --YGKDS----CQG-DSGGPLVCG-- 68 usage_00489.pdb 47 -----GQ---DPCQSDSGGPLVC--- 61 usage_00490.pdb 44 -----GQ---DPCQSDSGGPLVCD-- 59 usage_00491.pdb 47 -----GQ---DPCQSDSGGPLVCD-- 62 usage_00508.pdb 56 AKDSCGG--------DSGGPLLAERA 73 DSGGPL c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################