################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:58 2021 # Report_file: c_0875_41.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00022.pdb # 2: usage_00130.pdb # 3: usage_00756.pdb # 4: usage_00829.pdb # 5: usage_01025.pdb # 6: usage_01026.pdb # # Length: 127 # Identity: 48/127 ( 37.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/127 ( 44.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/127 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 ----------SKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKE-M-- 47 usage_00130.pdb 1 -------QYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPT 53 usage_00756.pdb 1 HLIKEAGDAESRVFYLKMKGDYYRYLAEVAT---KKRIIDSARSAYQEAMDISKKEMPPT 57 usage_00829.pdb 1 -------DAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPT 53 usage_01025.pdb 1 --------AESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPT 52 usage_01026.pdb 1 --------AESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPT 52 S VFYLKMKGDYYRYLAEVA Kk i d AYqEA ISKke usage_00022.pdb 48 --IRLGLALNFSVFYY--------ACSLAKTAFDEAIAEL------------LIMQLLRD 85 usage_00130.pdb 54 HPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRD 113 usage_00756.pdb 58 NPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMAD--------------------- 96 usage_00829.pdb 54 NPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRD 113 usage_01025.pdb 53 HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRD 112 usage_01026.pdb 53 HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRD 112 IRLGLALNFSVF Y A sLAKt FDeA A usage_00022.pdb 86 NLTLW-- 90 usage_00130.pdb 114 NLTLWTS 120 usage_00756.pdb ------- usage_00829.pdb 114 NLTLW-- 118 usage_01025.pdb 113 NLTLWTS 119 usage_01026.pdb 113 NLTLWT- 118 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################