################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:03:06 2021 # Report_file: c_1402_45.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00049.pdb # 2: usage_00050.pdb # 3: usage_00120.pdb # 4: usage_00121.pdb # 5: usage_00156.pdb # 6: usage_00259.pdb # 7: usage_00260.pdb # 8: usage_00261.pdb # 9: usage_00297.pdb # 10: usage_00322.pdb # 11: usage_00341.pdb # 12: usage_00342.pdb # 13: usage_00343.pdb # 14: usage_00344.pdb # 15: usage_00474.pdb # 16: usage_00497.pdb # 17: usage_00498.pdb # 18: usage_00499.pdb # 19: usage_00569.pdb # 20: usage_00613.pdb # 21: usage_00614.pdb # 22: usage_00618.pdb # 23: usage_00619.pdb # 24: usage_00686.pdb # 25: usage_00770.pdb # 26: usage_00932.pdb # 27: usage_00933.pdb # 28: usage_00966.pdb # 29: usage_00967.pdb # # Length: 77 # Identity: 0/ 77 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 77 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 77 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00050.pdb 1 -----------HHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 34 usage_00120.pdb 1 -KETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTS----------S-----GGI 44 usage_00121.pdb 1 -KETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTS----------S-----GGI 44 usage_00156.pdb 1 -----------HHQTYVTNLNNLVEGTEHDGRNLEEIVKTS----------N-----GGI 34 usage_00259.pdb 1 SKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVRSS----------D-----GGV 45 usage_00260.pdb 1 SKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVRSS----------D-----GGV 45 usage_00261.pdb 1 SKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVCSS----------D-----GGV 45 usage_00297.pdb 1 SAETLDYHHGKHHNTYVVKLNGLIPGTEFEGKTLEEIIKTS----------T-----GGV 45 usage_00322.pdb 1 SKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIVQKS----------E-----GGI 45 usage_00341.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00342.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00343.pdb 1 -----------HHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 34 usage_00344.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00474.pdb 1 SSHLLDRHYNGHHKTYVDVLNKLVVGTEFEGLGNESLGDIVVKAHNSGSA-G-----RAI 54 usage_00497.pdb 1 -----------HHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 34 usage_00498.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00499.pdb 1 -----------HHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 34 usage_00569.pdb 1 -----------HHKGYVDNLNKLTQDTELADKSLEDVIRTT----------YGDAAKVGI 39 usage_00613.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00614.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 usage_00618.pdb 1 SKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVCSS----------D-----GGV 45 usage_00619.pdb 1 SKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVCSS----------D-----GGV 45 usage_00686.pdb 1 SPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKS----------S-----GGV 45 usage_00770.pdb 1 ------------LAFFRNMYDKYRD-----A-FLSHLNEYS---------LE-----EEI 28 usage_00932.pdb 1 -----------HLKTYVDNLNKLIIGTEFENADLNTIVQKS----------E-----GGI 34 usage_00933.pdb 1 SKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIVQKS----------E-----GGI 45 usage_00966.pdb 1 -----------HHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 34 usage_00967.pdb 1 SAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS----------E-----GGV 45 yv ln l l usage_00049.pdb 46 FNNAAEVWNHTFYWNCL 62 usage_00050.pdb 35 FNNAAEVWNHTFYWNCL 51 usage_00120.pdb 45 FNNAAQVWNHTFYWNCL 61 usage_00121.pdb 45 FNNAAQVWNHTFYWNCL 61 usage_00156.pdb 35 FNNAAQVFNHTFYWNCL 51 usage_00259.pdb 46 FNNAAQIWNHTFYWNSL 62 usage_00260.pdb 46 FNNAAQIWNHTFYWNSL 62 usage_00261.pdb 46 FNNAAQIWNHTFYWNSL 62 usage_00297.pdb 46 FNNAAQIWNHTFYWNCL 62 usage_00322.pdb 46 FNNAGQTLNHNLYFTQF 62 usage_00341.pdb 46 FNNAAQVWNHTFYWNCL 62 usage_00342.pdb 46 FNNAAQVWNHTFYWNCL 62 usage_00343.pdb 35 FNNAAQVWNHTFYWNCL 51 usage_00344.pdb 46 FNNAAQVWNHTFYWNCL 62 usage_00474.pdb 55 FNNAAQIWNHDFYWQS- 70 usage_00497.pdb 35 FNNAAEVWNHTFYWNCL 51 usage_00498.pdb 46 FNNAAEVWNHTFYWNCL 62 usage_00499.pdb 35 FNNAAEVWNHTFYWNCL 51 usage_00569.pdb 40 FNNAAQVWNHTFFWNS- 55 usage_00613.pdb 46 FNNAAHVWNHTFYWNCL 62 usage_00614.pdb 46 FNNAAHVWNHTFYWNCL 62 usage_00618.pdb 46 FNNAAQIWNHTFYWNSL 62 usage_00619.pdb 46 FNNAAQIWNHTFYWNS- 61 usage_00686.pdb 46 FNNAAQIYNHDFYWDC- 61 usage_00770.pdb 29 KEHISKYYKLLFDYNCL 45 usage_00932.pdb 35 FNNAGQTLNHNLYFTQF 51 usage_00933.pdb 46 FNNAGQTLNHNLYFTQ- 61 usage_00966.pdb 35 FNNAAQVWNHTFYWNCL 51 usage_00967.pdb 46 FNNAAQVWNHTFYWNCL 62 fnna nh #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################