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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:03:29 2021
# Report_file: c_0415_1.html
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#====================================
# Aligned_structures: 9
#   1: usage_00037.pdb
#   2: usage_00043.pdb
#   3: usage_00049.pdb
#   4: usage_00069.pdb
#   5: usage_00070.pdb
#   6: usage_00072.pdb
#   7: usage_00111.pdb
#   8: usage_00159.pdb
#   9: usage_00179.pdb
#
# Length:         73
# Identity:       62/ 73 ( 84.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     62/ 73 ( 84.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 73 ( 15.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00037.pdb         1  EYIMSKTLGS----EVKLAFERKTCKKVAIKIISK-PALNVETEIEILKKLNHPCIIKIK   55
usage_00043.pdb         1  EYIMSKTLGSGA-GEVKLAFERKTCKKVAIKIISK--ALNVETEIEILKKLNHPCIIKIK   57
usage_00049.pdb         1  -YIMSKTLGSGA-GEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK   54
usage_00069.pdb         1  -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK   55
usage_00070.pdb         1  -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK   55
usage_00072.pdb         1  -YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK---LNVETEIEILKKLNHPCIIKIK   56
usage_00111.pdb         1  EYIMSKTLGS----EVKLAFERKTCKKVAIKIISK----NVETEIEILKKLNHPCIIKIK   52
usage_00159.pdb         1  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR---NVETEIEILKKLNHPCIIKIK   57
usage_00179.pdb         1  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK---LNVETEIEILKKLNHPCIIKIK   57
                            YIMSKTLGS    EVKLAFERKTCKKVAIKIISK    NVETEIEILKKLNHPCIIKIK

usage_00037.pdb        56  NFFDAEDYYIV--   66
usage_00043.pdb        58  NFFDAEDYYIV--   68
usage_00049.pdb        55  NFFDAEDYYIV--   65
usage_00069.pdb        56  NFFDAEDYYIV--   66
usage_00070.pdb        56  NFFDAEDYYIV--   66
usage_00072.pdb        57  NFFDAEDYYIV--   67
usage_00111.pdb        53  NFFDAEDYYIV--   63
usage_00159.pdb        58  NFFDAEDYYIVLE   70
usage_00179.pdb        58  NFFDAEDYYIV--   68
                           NFFDAEDYYIV  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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