################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:36 2021 # Report_file: c_1305_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00113.pdb # 2: usage_00188.pdb # 3: usage_00793.pdb # 4: usage_00983.pdb # 5: usage_00984.pdb # 6: usage_00985.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 43 ( 55.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 43 ( 37.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 -K-----PYQRQFIEFALNKQV-LKFGEFTLKSGRKSPYFFNA 36 usage_00188.pdb 1 GGIAREWFFLLSHEVLNPMYCLFEYAGK-------NNYCLQI- 35 usage_00793.pdb 1 -------PYQRQFIEFALNKQV-LKFGEFTLKSGRKSPYFFNA 35 usage_00983.pdb 1 -------AYQREFIEFALEKQV-LKFGEFTLKSGRKSPYFFNA 35 usage_00984.pdb 1 -------AYQREFIEFALEKQV-LKFGEFTLKSGRKSPYFFNA 35 usage_00985.pdb 1 -K-----AYQREFIEFALEKQV-LKFGEFTL---RKSPYFFNA 33 yqr fiefal kqv lkfGe kspyffn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################