################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:17 2021 # Report_file: c_1371_83.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00344.pdb # 2: usage_00345.pdb # 3: usage_00346.pdb # 4: usage_00347.pdb # 5: usage_00580.pdb # 6: usage_00581.pdb # 7: usage_00582.pdb # 8: usage_00583.pdb # 9: usage_01539.pdb # 10: usage_01540.pdb # 11: usage_01825.pdb # # Length: 91 # Identity: 67/ 91 ( 73.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 91 ( 73.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 91 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00344.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAAS--------------VAAMLPERARWAEEN 45 usage_00345.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEEN 59 usage_00346.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAASRF---------PERVAAMLPERARWAEEN 50 usage_00347.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAASRFAASEAAIPAPERVAAMLPERARWAEEN 59 usage_00580.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAASRF-------PAPERVAAMLPERARWAEEN 52 usage_00581.pdb 1 GLADIREAIDRIDLDIVQALGRRMDYVKAASRF----------ERVAAMLPERARWAEEN 50 usage_00582.pdb 1 GLADIREAIDRIDLDIVQALGRRMDYVKAASRF------IPAPERVAAMLPERARWAEEN 54 usage_00583.pdb 1 GLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEEN 60 usage_01539.pdb 1 --ADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEEN 58 usage_01540.pdb 1 -LADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEEN 59 usage_01825.pdb 1 --ADIREAIDRIDLDIVQALGRRMDYVKAASRFEASEAAIPAPERVAAMLPERARWAEEN 58 ADIREAIDRIDLDIVQALGRRMDYVKAAS VAAMLPERARWAEEN usage_00344.pdb 46 GLDAPFVEGLFAQIIHWYTAEQIKYWRQ--- 73 usage_00345.pdb 60 GLDAPFVEGLFAQIIHWYTAEQIKYWRQT-- 88 usage_00346.pdb 51 GLDAPFVEGLFAQIIHWYTAEQIKY------ 75 usage_00347.pdb 60 GLDAPFVEGLFAQIIHWYIAEQIKYWRQTRG 90 usage_00580.pdb 53 GLDAPFVEGLFAQIIHWYIAEQIK------- 76 usage_00581.pdb 51 GLDAPFVEGLFAQIIHWYIAEQIKYW----- 76 usage_00582.pdb 55 GLDAPFVEGLFAQIIHWYIAEQIKYW----- 80 usage_00583.pdb 61 GLDAPFVEGLFAQIIHWYIAEQIKYWRQT-- 89 usage_01539.pdb 59 GLDAPFVEGLFAQIIHWYIAEQIKYWRQ--- 86 usage_01540.pdb 60 GLDAPFVEGLFAQIIHWYIAEQIKYWRQ--- 87 usage_01825.pdb 59 GLDAPFVEGLFAQIIHWYIAEQIKYWRQT-- 87 GLDAPFVEGLFAQIIHWY AEQIK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################