################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:28 2021 # Report_file: c_1489_109.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00938.pdb # 2: usage_01728.pdb # 3: usage_01740.pdb # 4: usage_01804.pdb # 5: usage_01939.pdb # 6: usage_03453.pdb # 7: usage_03454.pdb # 8: usage_03455.pdb # 9: usage_03909.pdb # 10: usage_04024.pdb # 11: usage_04378.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 55 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 55 ( 67.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00938.pdb 1 SMEYVDLEKEENKD----ISAEIKQAEKQLSHYLL-------------------- 31 usage_01728.pdb 1 SMEYVDLEKEENKD----ISAEIKQAEKQLSHYLLT------------------- 32 usage_01740.pdb 1 SMEYVDLEKEENKD----ISAEIKQAEKQLSHYLLT------------------- 32 usage_01804.pdb 1 -SEYVDLEKEENKD----ISAEIKQAEKQLSHYLL-------------------- 30 usage_01939.pdb 1 -------------L----SRLQEAGELLRTEINRSVKVQHPQLPHINTV------ 32 usage_03453.pdb 1 TMEYVDLEKEENKD----IKSAIKKAEKQLSDYLLT------------------- 32 usage_03454.pdb 1 TAEYVDLEKEENKD----IKSAIKKAEKQLSDYLLT------------------- 32 usage_03455.pdb 1 TAEYVDLEKEENKD----IKSAIKKAEKQLSDYLL-------------------- 31 usage_03909.pdb 1 -------SK----EQKDKWIQVLEEVPAKLKQAVEV------------TDSQLDT 32 usage_04024.pdb 1 SMEYVDLEKEENKD----ISAEIKQAEKQLSHYLLT------------------- 32 usage_04378.pdb 1 TMEYVDLEKEENKD----IKSAIKKAEKQLSDYLL-------------------- 31 l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################