################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:30 2021 # Report_file: c_1282_17.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00077.pdb # 2: usage_00078.pdb # 3: usage_00226.pdb # 4: usage_00257.pdb # 5: usage_00334.pdb # 6: usage_00343.pdb # 7: usage_00489.pdb # 8: usage_00585.pdb # 9: usage_00654.pdb # # Length: 42 # Identity: 0/ 42 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 42 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 42 ( 59.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 ---IIYLDPEYWYLASGNGLESLKTMI-LEIKNAVK------ 32 usage_00078.pdb 1 ---IIYLDPEYWYLASGNGLESLKTMI-LEIKNAVK------ 32 usage_00226.pdb 1 ---IIYLDPEYWYLASGNGLESLKTMI-LEIKNAV------- 31 usage_00257.pdb 1 ---IIYLDPEYWYLASGNGLESLKTMI-LEIKNAV------- 31 usage_00334.pdb 1 ---YVKPHGALYN-DLVG---DDELLR-AVLDACAAYR---- 30 usage_00343.pdb 1 TSV--TAPTGT----------DNENIQ-KLLADIKSSQN--- 26 usage_00489.pdb 1 H--IVKVDAGTY-WY--NDPYTLDFMR-KDLKEKLIKA--AK 34 usage_00585.pdb 1 ---YKTSRMETL-----S---NGNAIE-ELLRSVIDEASR-- 28 usage_00654.pdb 1 H--VLYLNPTAWYIVFGGV----ETTRIIDDVLQVAAR---- 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################