################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:18 2021 # Report_file: c_0946_27.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00322.pdb # 2: usage_00323.pdb # 3: usage_00324.pdb # 4: usage_01032.pdb # # Length: 72 # Identity: 65/ 72 ( 90.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 72 ( 90.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 72 ( 9.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00322.pdb 1 HKIKGTVVLMPKNE---LNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTL 57 usage_00323.pdb 1 HKIKGTVVLMPKNEL-NLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTL 59 usage_00324.pdb 1 HKIKGTVVLMPKNELENLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTL 60 usage_01032.pdb 1 HKIKGTVVLMPKNEL-NLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINT----L 55 HKIKGTVVLMPKNE LNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINT L usage_00322.pdb 58 GAGESAFNIHFE 69 usage_00323.pdb 60 GAGESAFNIHFE 71 usage_00324.pdb 61 GAGESAFNIHFE 72 usage_01032.pdb 56 GAGESAFNIHFE 67 GAGESAFNIHFE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################