################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:44:20 2021 # Report_file: c_0102_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00019.pdb # 4: usage_00020.pdb # 5: usage_00021.pdb # 6: usage_00051.pdb # 7: usage_00219.pdb # 8: usage_00220.pdb # 9: usage_00221.pdb # 10: usage_00223.pdb # 11: usage_00224.pdb # 12: usage_00225.pdb # 13: usage_00227.pdb # 14: usage_00228.pdb # 15: usage_00231.pdb # 16: usage_00232.pdb # 17: usage_00253.pdb # # Length: 193 # Identity: 114/193 ( 59.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 146/193 ( 75.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/193 ( 10.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ------------QKDQ-NISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAP 47 usage_00009.pdb 1 ------------QKDQ-NISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAP 47 usage_00019.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00020.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00021.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00051.pdb 1 GKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPAT 60 usage_00219.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00220.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00221.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00223.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00224.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00225.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00227.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00228.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00231.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00232.pdb 1 GKTTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAP 60 usage_00253.pdb 1 ------------QKDQNMICIYVAIGQKESTVATVVETLAKHGAPDYTIVVTASASQPAP 48 Qk Q I iYVAIGQK StV VVetl h A dYTIVVtasAs PAp usage_00008.pdb 48 LLFLAPYAGVAG-EY-FYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYL 105 usage_00009.pdb 48 LLFLAPYAGVAG-EY-FYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYL 105 usage_00019.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00020.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00021.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00051.pdb 61 LQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYL 120 usage_00219.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00220.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00221.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00223.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00224.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00225.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00227.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00228.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00231.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00232.pdb 61 LLYLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYL 120 usage_00253.pdb 49 LLFLAPYAGVAMGEYFMIMGKHVLVVIDDLSKQAAAYRQLSLLLRRPPGREAYPGDIFYL 108 Ll LAPYaG A EY y gkH LvvyDDLSKQAaAYR lSLLLRRPPGREAYPGD FYL usage_00008.pdb 106 HSRLLERAAKLSDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGV 165 usage_00009.pdb 106 HSRLLERAA---DAKGG-GLTALPFVETQAGDISAYIPTNVISITD-QIFLQSDLFFSGV 160 usage_00019.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00020.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00021.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00051.pdb 121 HSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGI 180 usage_00219.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00220.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00221.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00223.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00224.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00225.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00227.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00228.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00231.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00232.pdb 121 HSRLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGV 180 usage_00253.pdb 109 HSRLLERAAKLSDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGV 168 HSRLLERAA d kGg slTALPf ETQAGD SAYIPTNVISITD QIFL sDLF sGv usage_00008.pdb 166 RPAINAGLSVSRV 178 usage_00009.pdb 161 RPAINAGLSVSRV 173 usage_00019.pdb 181 RPAVNVGISVSRV 193 usage_00020.pdb 181 RPAVNVGISVSRV 193 usage_00021.pdb 181 RPAVNVGISVSRV 193 usage_00051.pdb 181 RPAINVGISVSRV 193 usage_00219.pdb 181 RPAVNVGISVSRV 193 usage_00220.pdb 181 RPAVNVGISVSRV 193 usage_00221.pdb 181 RPAVNVGISVSRV 193 usage_00223.pdb 181 RPAVNVGISVSRV 193 usage_00224.pdb 181 RPAVNVGISVSRV 193 usage_00225.pdb 181 RPAVNVGISVSRV 193 usage_00227.pdb 181 RPAVNVGISVSRV 193 usage_00228.pdb 181 RPAVNVGISVSRV 193 usage_00231.pdb 181 RPAVNVGISVSRV 193 usage_00232.pdb 181 RPAVNVGISVSRV 193 usage_00253.pdb 169 RPAINAGLSVSRV 181 RPA N G SVSRV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################