################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:07 2021 # Report_file: c_1024_6.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00070.pdb # 2: usage_00114.pdb # 3: usage_00139.pdb # 4: usage_00140.pdb # 5: usage_00168.pdb # 6: usage_00210.pdb # # Length: 65 # Identity: 52/ 65 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 65 ( 86.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 65 ( 7.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00070.pdb 1 RKTYVLKLYVAGNTPNSVRALKTLNNILEKEFKGVYALKVIDVLKNPQLAEEDKILATPT 60 usage_00114.pdb 1 -KTYVLKLYVAGNTPNSVRALKTLKNILEQEFQGIYALKVIDVLKNPQLAEEDKILATPT 59 usage_00139.pdb 1 ---YILKLYVAGNTPNSVRALKTLKNILEVEFQGVYALKVIDVLKNPQLAEEDKILATPT 57 usage_00140.pdb 1 ----ILKLYVAGNTPNSVRALKTLKNILEVEFQGVYALKVIDVLKNPQLAEEDKILATPT 56 usage_00168.pdb 1 -----LKLYVAGNTPNSVRALKTLNNILEKEFKGVYALKVIDVLKNPQLAEEDKILATPC 55 usage_00210.pdb 1 -----LKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNPQLAEEDKILATPT 55 LKLYVAGNTPNSVRALKtL NILE EF GvYALKVIDVLKNPQLAEEDKILATPt usage_00070.pdb 61 LAKVL 65 usage_00114.pdb 60 LSKIL 64 usage_00139.pdb 58 LAKVL 62 usage_00140.pdb 57 LAKVL 61 usage_00168.pdb 56 LAKVL 60 usage_00210.pdb 56 LAKIL 60 LaK L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################