################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:11 2021 # Report_file: c_1452_104.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_02702.pdb # 2: usage_03293.pdb # 3: usage_03722.pdb # 4: usage_03723.pdb # 5: usage_03878.pdb # 6: usage_03954.pdb # 7: usage_04374.pdb # 8: usage_04991.pdb # 9: usage_05507.pdb # 10: usage_05650.pdb # # Length: 45 # Identity: 4/ 45 ( 8.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 45 ( 15.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 45 ( 62.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02702.pdb 1 --------------EK--VKEPGE---SPIFWYAPESLTESKFSV 26 usage_03293.pdb 1 ---EYRV---------------GD---SPVFWYAPECLKEYKFYY 24 usage_03722.pdb 1 EKV--------------------E---SPIFWYAPESLTESKFSV 22 usage_03723.pdb 1 EKV--------------------E---SPIFWYAPESLTESKFSV 22 usage_03878.pdb 1 ---------GDRTS--------FC---GTPEFLAPEVLTETSYT- 24 usage_03954.pdb 1 -------D--------TTAHAGAK---FPIKWTAPESLAYNKFSI 27 usage_04374.pdb 1 --------------EK--VKEPGE---SPIFWYAPESLTESKFSV 26 usage_04991.pdb 1 --------GD-----TYTAHAGAK---FPIKWTAPESLAYNTFSI 29 usage_05507.pdb 1 ------------------------EKVSPIFWYAPESLTESKFSV 21 usage_05650.pdb 1 ---------------T--VKDDRD---SPVFWYAPECLMQSKFYI 25 p w APE L f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################