################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:43 2021 # Report_file: c_1485_129.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00320.pdb # 2: usage_00578.pdb # 3: usage_00598.pdb # 4: usage_00687.pdb # 5: usage_00799.pdb # 6: usage_00998.pdb # 7: usage_01398.pdb # 8: usage_01717.pdb # 9: usage_01718.pdb # 10: usage_02007.pdb # 11: usage_02008.pdb # 12: usage_02135.pdb # # Length: 25 # Identity: 0/ 25 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 25 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 25 ( 24.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00320.pdb 1 ----DADLAAAVESAKAAQPKWAAT 21 usage_00578.pdb 1 NDRTLRRMRKVVNIINAMEPEMEKL 25 usage_00598.pdb 1 ----LEDIAKNYEAALKLVDEVK-- 19 usage_00687.pdb 1 ----KALLNRAIDAALAARKEWDLK 21 usage_00799.pdb 1 ----AEDARKAIDAAERAQPEWEAL 21 usage_00998.pdb 1 ----WRKAALVLNASRRFRYTLDLK 21 usage_01398.pdb 1 --GPEDEHKAERLVLEAKTEIQGL- 22 usage_01717.pdb 1 ----REEAKEAIDTAEKYKEVMKNL 21 usage_01718.pdb 1 ---SREEAKEAIDTAEKYKEVMKNL 22 usage_02007.pdb 1 ----AADVDLAVDAATRAFPAWSAM 21 usage_02008.pdb 1 ----AADVDLAVDAATRAFPAWSAM 21 usage_02135.pdb 1 ---SDADLAAAVESAKAAQPKWAAT 22 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################