################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:04 2021 # Report_file: c_0740_27.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00103.pdb # 2: usage_00246.pdb # 3: usage_00333.pdb # 4: usage_00430.pdb # 5: usage_00621.pdb # 6: usage_00696.pdb # 7: usage_00697.pdb # # Length: 84 # Identity: 6/ 84 ( 7.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 84 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 84 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00103.pdb 1 -GAVYKGSL-D-ERPVAVKVFSFANRQNFINE------KNIYRV----P--LMEHDNIAR 45 usage_00246.pdb 1 ----YKGRHVKTGQLAAIKVMDV-TEDE----------EEEIKLEINMLKKYSHHRNIAT 45 usage_00333.pdb 1 ----YKGRHVKTGQLAAIKVMD----EE----------IKQEINMLKKY---SHHRNIAT 39 usage_00430.pdb 1 --QVYKGRHVKTGQLAAIKVMDV-TEDE----------EEEIKLEINMLKKYSHHRNIAT 47 usage_00621.pdb 1 PSWMYKAQNNKNGRHFALRRIEG---------YRLTNEKAILNVTKEWK--KIINANIVT 49 usage_00696.pdb 1 -GQVYKGRHVKTGQLAAIKVMDV-TEDE----------EEEIKLEINMLKKYSHHRNIAT 48 usage_00697.pdb 1 -GQVYKGRHVKTGQLAAIKVMDV-TEDE----------EEEIKLEINMLKKYSHHRNIAT 48 YKg k g A kv h NIat usage_00103.pdb 46 FIVGDERVT-AD--GRMEYLLVME 66 usage_00246.pdb 46 YYGAFIKKSP-PG-HDDQLWLVME 67 usage_00333.pdb 40 YYGAFI----------DQLWLVME 53 usage_00430.pdb 48 YYGAFIKKSP-PG-HDDQLWLVME 69 usage_00621.pdb 50 VHEAFTTE---FFGD-SSLIFVYD 69 usage_00696.pdb 49 YYGAFIKKSP-PG-HDDQLWLVME 70 usage_00697.pdb 49 YYGAFIKKSP-PG-HDDQLWLVME 70 af l lVme #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################