################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:53 2021 # Report_file: c_0212_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00032.pdb # 2: usage_00090.pdb # 3: usage_00186.pdb # 4: usage_00187.pdb # 5: usage_00188.pdb # 6: usage_00189.pdb # 7: usage_00190.pdb # 8: usage_00191.pdb # 9: usage_00243.pdb # 10: usage_00282.pdb # 11: usage_00306.pdb # 12: usage_00307.pdb # 13: usage_00365.pdb # # Length: 102 # Identity: 57/102 ( 55.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/102 ( 77.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/102 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 VQLVQSGAEVKKPGESLKISCKGSGYRFTSYWIVWVRQMPGKGLEWMGIIYPGDFDTKYS 60 usage_00090.pdb 1 VQLVQSGAEVKKPGESLKISCKASGYSFSSYWIAWVRQMPGKGLEWMGFIYPADSDTRYS 60 usage_00186.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00187.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00188.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00189.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00190.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00191.pdb 1 VQLVQSGAEVKKPGESLKISCKVSGYNFASEWIGWVRQMPGKGLEWMGIIYPGDSDTKYS 60 usage_00243.pdb 1 -QLVQSGAEVKKAGESLEISCKGSGYTFTDHWIAWVRQVPGKGLEWMGMIYPGDSDTRYS 59 usage_00282.pdb 1 VQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYS 60 usage_00306.pdb 1 -QLVQSGAEVKKPGESLTISCKGSGYSFSSYWIGWVRRMPGKGLEWMGIINPRDSDTRYS 59 usage_00307.pdb 1 -QLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYS 59 usage_00365.pdb 1 VQLVQSGAEVKKPGESLKISCQSFGYIFIDHTIHWMRQMPGQGLEWMGAISPRHDITKYN 60 QLVQSGAEVKKpGESL ISCk sGY F wI WvRqmPGkGLEWMG I P d dT Ys usage_00032.pdb 61 PSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARLGGR- 101 usage_00090.pdb 61 PSFQGQGTISADKSISTAYLQWSSLKASDTAMYYCAI----- 97 usage_00186.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCARQNHYG 102 usage_00187.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCARQNHYG 102 usage_00188.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCARQNHYG 102 usage_00189.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCARQNHYG 102 usage_00190.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCAR----- 97 usage_00191.pdb 61 PSFQGQVIISADKSINTAYLQWSSLKASDTAIYYCA------ 96 usage_00243.pdb 60 PSLQGRVTMSADKTLSTAYLQWSRLEASDTAMYYCAR----- 96 usage_00282.pdb 61 PSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARLGGR- 101 usage_00306.pdb 60 PSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCA------ 95 usage_00307.pdb 60 PSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARVVAD- 100 usage_00365.pdb 61 EMFRGQVTISADKSSSTAYLQWSSLKASDTAMYFCARGGF-- 100 psfqGqv iSADKs TAYLQWSsLkASDTA YyCA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################