################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:34 2021 # Report_file: c_0104_5.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00022.pdb # 2: usage_00024.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00033.pdb # 9: usage_00089.pdb # # Length: 202 # Identity: 49/202 ( 24.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 82/202 ( 40.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 35/202 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00024.pdb 1 TKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRL 60 usage_00028.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00029.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00030.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00031.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00032.pdb 1 TTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRC 60 usage_00033.pdb 1 GIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRC 60 usage_00089.pdb 1 TVEDIQGLVRDYAKAAENVIEAGFDGVEIHGANGYLIDQFLHHDSNRRTDEYGGTPVNMS 60 t I v r AA Na EAGFDGvEiHgA GYLIdQF N R D YGGsl Nr usage_00022.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00024.pdb 61 RFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 120 usage_00028.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00029.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00030.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00031.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00032.pdb 61 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 120 usage_00033.pdb 61 KFPLEIVDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIE 120 usage_00089.pdb 61 RFALEVVDAIIARIGHDRTGLRISPGAYFNMASDSRDRVVFDYLLPELEKRDLAFVHIGI 120 rF lE V A IG dRvG R sP a n D p y LnK y H e usage_00022.pdb 121 PR------------T-----------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 157 usage_00024.pdb 121 VDWDDAPDTPV---------------SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLA 165 usage_00028.pdb 121 PRM--------KTCT-----------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 161 usage_00029.pdb 121 PRM--------KT-T-----------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 160 usage_00030.pdb 121 PR------------T-----------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 157 usage_00031.pdb 121 PR------------T-----------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 157 usage_00032.pdb 121 PR------------------------ESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA 156 usage_00033.pdb 121 AR------------M-----------HTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRT 157 usage_00089.pdb 121 -F-------------DDSIEFDYLGGTASSYVRAHYGKTLVGVGSYSAETASKAIAEDKF 166 R ay gt i aG y E A usage_00022.pdb 158 DLVAYGRLFISNPDLPKRFEL- 178 usage_00024.pdb 166 DMIGFGRPFIAN---------- 177 usage_00028.pdb 162 DLVAYGRLFISN---------- 173 usage_00029.pdb 161 DLVAYGRLFISN---------- 172 usage_00030.pdb 158 DLVAYGRLFISN---------- 169 usage_00031.pdb 158 DLVAYGRLFISN---------- 169 usage_00032.pdb 157 DLVAYGRLFISN---------- 168 usage_00033.pdb 158 DLVAYGRWFLAN---------- 169 usage_00089.pdb 167 DLIAIGRPFIANPDYVAKVRNS 188 Dl a GR Fi N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################