################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:39 2021 # Report_file: c_0008_13.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00042.pdb # 2: usage_00052.pdb # 3: usage_00053.pdb # 4: usage_00054.pdb # 5: usage_00081.pdb # # Length: 288 # Identity: 84/288 ( 29.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 161/288 ( 55.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/288 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00042.pdb 1 GSGVAIITPFTNTGVDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVI 60 usage_00052.pdb 1 GVYPAIITPFKNKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVV 60 usage_00053.pdb 1 ------ITPFKNKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVV 54 usage_00054.pdb 1 GVYPAIITPFKNKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVV 60 usage_00081.pdb 1 GVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVI 60 iTPF N Vdfd L e inflien I GTTgEspTl E k i V usage_00042.pdb 61 DKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSD 120 usage_00052.pdb 61 DVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAE 120 usage_00053.pdb 55 DVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAE 114 usage_00054.pdb 61 DVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAE 120 usage_00081.pdb 61 DLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIAD 120 D Vn Rv VIAG GsN Te I S Ae GaDa l ITPYYNK tQ GL KHF va usage_00042.pdb 121 AVSTPIIIYNVPGRTGLNITPGTLKELCE-DKNIVAVKEASGNISQIAQIKALCGD-KLD 178 usage_00052.pdb 121 SINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIHDA---KIT 177 usage_00053.pdb 115 SINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIHDA---KIT 171 usage_00054.pdb 121 SINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIHDA---KIT 177 usage_00081.pdb 121 AVKLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIVALKDATNDFEYLEEVKKRIDTNSFA 179 lPivlYNVPsRT n eP Tvk L e nI AvKeA n sq e k usage_00042.pdb 179 IYSGNDDQIIPILALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSLALTNA 238 usage_00052.pdb 178 VLSGNDELTLPIIALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPLMKA 237 usage_00053.pdb 172 VLSGNDELTLPIIALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPLMKA 231 usage_00054.pdb 178 VLSGNDELTLPIIALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPLMKA 237 usage_00081.pdb 180 LYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLD-IQDQ-FKPIGTLLSA 237 SGND pi alGG GVISV AN Pkef m l G a L A usage_00042.pdb 239 LFIETNPIPVKTAMNLMNMKVGDLRLPLCEMNENNLEILKKELKAYN- 285 usage_00052.pdb 238 MFIETNPIPVKTALNMMGRPAGELRLPLCEMSEEHKKILENVLKDLG- 284 usage_00053.pdb 232 MFIETNPIPVKTALNMMGRPAGELRLPLCEMSEEHKKILENVLKDLG- 278 usage_00054.pdb 238 MFIETNPIPVKTALNMMGRPAGELRLPLCEMSEEHKKILENVLKDLG- 284 usage_00081.pdb 238 LSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLRETYDTFKA 285 fietNPIPvKta n mg geLRLPLcem e kiL lk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################