################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:16:28 2021 # Report_file: c_1442_937.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_04661.pdb # 2: usage_04883.pdb # 3: usage_04884.pdb # 4: usage_07098.pdb # 5: usage_07152.pdb # 6: usage_07459.pdb # 7: usage_14081.pdb # 8: usage_14322.pdb # 9: usage_14893.pdb # 10: usage_15404.pdb # 11: usage_16612.pdb # 12: usage_17688.pdb # 13: usage_17689.pdb # 14: usage_17703.pdb # 15: usage_18868.pdb # 16: usage_19471.pdb # # Length: 53 # Identity: 5/ 53 ( 9.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 53 ( 15.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 37/ 53 ( 69.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_04661.pdb 1 AVYYCAADKG---LCSWLRAK---------V-----TF-GS-WGQGTQVTVS- 33 usage_04883.pdb 1 -LYYCARQGT-----------GT-TG-VSED-----SF-DL-WGQGTKVI--- 29 usage_04884.pdb 1 -LYYCARQGT-----------GT-TG-VSED-----SF-DL-WGQGTKVI--- 29 usage_07098.pdb 1 -IYYCVSG--------------------CYS-----WR-GP-WGQGTQVTVS- 24 usage_07152.pdb 1 -MYYCARRERYD-----------------EN-----GF-AY-WGQGTLVTVS- 27 usage_07459.pdb 1 -VYYCARGDW-N-------------------------F-DF-WGPGTMVTVS- 23 usage_14081.pdb 1 -VYFCARRSNWP-----------------YL-----PF-DP-WGQGTLVTVS- 27 usage_14322.pdb 1 -VYYCAKWLG-------------------GR-----DW-YD-RGQGTQVTVS- 25 usage_14893.pdb 1 -TYFCAKGLL-R-----------DGS--STW-----LP-YL-WGQGTLLTVS- 30 usage_15404.pdb 1 -VYYCAADLK-MQ-------------V-AAY-MNQRSV-DY-WGQGTQVTVSS 34 usage_16612.pdb 1 -IYYCAEARG-C-----------------KR--G--RYEYDFWGQGTQVTVS- 29 usage_17688.pdb 1 -VYYCAVIAN-P-----------V----YATSRNSDDY-GH-WGQGTQVTVS- 33 usage_17689.pdb 1 -VYYCAVIAN-P-----------V----YATSRNSDDY-GH-WGQGTQVTVS- 33 usage_17703.pdb 1 -VYYCAREMF-DS--------SA-DWS-PWR-----GM-VA-WGQGTLVTVS- 33 usage_18868.pdb 1 -IYYCNARVG-------------------ITML----A--H-WGQGTQVTVS- 25 usage_19471.pdb 1 -MYYCKASG------------------------------SS-WGQGTQVTVS- 20 Y C wGqGT v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################