################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:55 2021 # Report_file: c_0100_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00022.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00043.pdb # # Length: 186 # Identity: 52/186 ( 28.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 159/186 ( 85.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/186 ( 11.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00022.pdb 1 -HDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVST-PFAIETFAPNLE 58 usage_00031.pdb 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAE--- 57 usage_00032.pdb 1 -TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAE--- 56 usage_00033.pdb 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAE--- 57 usage_00043.pdb 1 -TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAE--- 56 tafIWDLdGTLLDsYEailsgieETfAqfsIpyDkekVrefifkys qdllvrvAe usage_00022.pdb 59 -------NFLEKYKEN--EARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEIL 109 usage_00031.pdb 58 DRNLDVEVLNQVRAQS--LAEKNAQV-VLPGAREVLAWADESGIQQFIYTHKGNNAFTIL 114 usage_00032.pdb 57 DRNLDVEVLNQVRAQS--LAEKNAQV-VLPGAREVLAWADESGIQQFIYTHKGNNAFTIL 113 usage_00033.pdb 58 DRNLDVEVLNQVRAQS--LAEKNAQV-VLPGAREVLAWADESGIQQFIYTHKGNNAFTIL 114 usage_00043.pdb 57 DRNLDVEVLNQVRAQSLAEKNAQ--VVLMPGAREVLAWADESGIQQFIYTHKGNNAFTIL 114 vlnqvraqs a v pGarevLawadesGiqqFiytHkgnnaftIL usage_00022.pdb 110 EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGL 167 usage_00031.pdb 115 KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGI 174 usage_00032.pdb 114 KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGI 173 usage_00033.pdb 115 KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGI 174 usage_00043.pdb 115 KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGI 174 kdlgvesYFTEilTSqSGFvRKPsPEaatYLldKYQln ntyyIGDRtlDvEfaQnsGi usage_00022.pdb 168 DTHLFT 173 usage_00031.pdb 175 QSIN-- 178 usage_00032.pdb 174 QSIN-- 177 usage_00033.pdb 175 QSIN-- 178 usage_00043.pdb 175 QSIN-- 178 qsin #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################