################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:45:04 2021 # Report_file: c_0335_3.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00003.pdb # 2: usage_00014.pdb # 3: usage_00019.pdb # 4: usage_00027.pdb # 5: usage_00028.pdb # 6: usage_00029.pdb # 7: usage_00030.pdb # 8: usage_00032.pdb # 9: usage_00036.pdb # 10: usage_00037.pdb # 11: usage_00038.pdb # 12: usage_00039.pdb # 13: usage_00040.pdb # 14: usage_00041.pdb # 15: usage_00042.pdb # 16: usage_00043.pdb # 17: usage_00044.pdb # 18: usage_00045.pdb # 19: usage_00046.pdb # 20: usage_00047.pdb # 21: usage_00051.pdb # 22: usage_00070.pdb # # Length: 120 # Identity: 3/120 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/120 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/120 ( 45.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ----------N-ITRHTVTLKWAK-P--EYT---GGF-KI-TSYIVEKRDL-PN-----G 35 usage_00014.pdb 1 R---NLQLSLPREAEGVIVGHWAP-P--IHT---HGL--I-REYIVEYSRS--GSK---M 43 usage_00019.pdb 1 -----LTVITREGKPRAVIVSWQP-P--LEA---NGK--I-TAYILFYTLD-KNIP-IDD 44 usage_00027.pdb 1 -----SLKLVK-KEPRQLELTWAGSR--PRN---P-G-G-NLSYELHVLNQ--------- 37 usage_00028.pdb 1 -----VVASLV--STRFIKLTWRT-P--ASD---PHGD-N-LTYSVFYTKE--GIA---R 40 usage_00029.pdb 1 -----VTVVSKEGKPKTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00030.pdb 1 -----SPVLTK-AGITWLSLQWSK-P--SGT---PSD-E-GISYILEMEEETSG----YG 42 usage_00032.pdb 1 -----VSGGGG--SKSELVITWET-VPEELQ---NGR--G-FGYVVAFRPH--GKM---I 41 usage_00036.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00037.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00038.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00039.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00040.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00041.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00042.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00043.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00044.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00045.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00046.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00047.pdb 1 -----VTVVSKEGKPRTIIVNWQP-P--SEA---NGK--I-TGYIIYYSTD-VNAE-IHD 44 usage_00051.pdb 1 -GPHIAYTE-AV-SDTQIMLKWTY-I---P-----TP--I-QGFYIYYRPT--DSDNDSD 43 usage_00070.pdb 1 -----VVWN-AT--DTKVLLNWEQ-V---KAMENESE--V-TGYKVFYRTS--SQN---N 40 W y usage_00003.pdb 36 RWLKAN-FSNIL-ENEFTVSG--LTEDAAYEFRVIAKNAAGAISPPSEPSDAITCR---- 87 usage_00014.pdb 44 WASQRA-A-----SNFTEIKN--LLVNTLYTVRVAAVTSRG-IGNWSDSKSIT------- 87 usage_00019.pdb 45 WIMETI-S--GD-RLTHQIMD--LNLDTMYYFRIQARNSKG-VGPLSDPILFR------- 90 usage_00027.pdb 38 DEEWHQ-M--VL-EPRVLLTK--LQPDTTYIVRVRTLTPLG-PGPFSPDHEFRT-S---- 85 usage_00028.pdb 41 ERVENTSH--PG-EMQVTIQN--LMPATVYIFRVMAQNKHG-SGESSAPLRVET-QPES- 92 usage_00029.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFRT-PKASG 96 usage_00030.pdb 43 FKPKYD----GE-DLAYTVKN--LRRSTKYKFKVIAYNSEG-KSNPSEVVEFT------- 87 usage_00032.pdb 42 WMLTVL-A--SADASRYVFRNESVRPFSPFEVKVGVFNNKG-EGPFSPTTLVYS-AEEEP 96 usage_00036.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFRT-PKADS 96 usage_00037.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00038.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00039.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00040.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFRT-PGTKH 96 usage_00041.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00042.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00043.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00044.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00045.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00046.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00047.pdb 45 WVIEPV-V--GN-RLTHQIQE--LTLDTPYYFKIQARNSKG-MGPMSEAVQFR------- 90 usage_00051.pdb 44 YKRDVV-E--GS-KQWHMIGH--LQPETSYDIKMQCFNEGG-ESEFSNVMICE------- 89 usage_00070.pdb 41 VQVLNT-N-----KTSAELVL--PIKE-DYIIEVKATTDGG-DGTSSEQIRIP------- 83 y G S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################