################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:22 2021 # Report_file: c_0036_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00002.pdb # 2: usage_00044.pdb # 3: usage_00045.pdb # 4: usage_00048.pdb # 5: usage_00050.pdb # 6: usage_00051.pdb # 7: usage_00061.pdb # 8: usage_00072.pdb # 9: usage_00073.pdb # 10: usage_00081.pdb # 11: usage_00082.pdb # 12: usage_00083.pdb # 13: usage_00084.pdb # 14: usage_00100.pdb # # Length: 294 # Identity: 210/294 ( 71.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 219/294 ( 74.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/294 ( 5.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 TLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 60 usage_00044.pdb 1 TLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 60 usage_00045.pdb 1 -LEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDSGIHSREW 59 usage_00048.pdb 1 TLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 60 usage_00050.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 59 usage_00051.pdb 1 -LDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 59 usage_00061.pdb 1 -LDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 59 usage_00072.pdb 1 ---------------HPELVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 45 usage_00073.pdb 1 ---------------HPELVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 45 usage_00081.pdb 1 ---------------NPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 45 usage_00082.pdb 1 -LEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 59 usage_00083.pdb 1 TLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 60 usage_00084.pdb 1 TLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREW 60 usage_00100.pdb 1 TLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREW 60 P LVSK QIG YEGRPIYVLKFSTGGS RPAIWID GIHSREW usage_00002.pdb 61 ITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVT 120 usage_00044.pdb 61 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 120 usage_00045.pdb 60 ITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTHSDNRLWRKTRSKA 119 usage_00048.pdb 61 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 120 usage_00050.pdb 60 ITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVT 119 usage_00051.pdb 60 ITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVT 119 usage_00061.pdb 60 ITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVT 119 usage_00072.pdb 46 ITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVT 105 usage_00073.pdb 46 ITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVT 105 usage_00081.pdb 46 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 105 usage_00082.pdb 60 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 119 usage_00083.pdb 61 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 120 usage_00084.pdb 61 VTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHT 120 usage_00100.pdb 61 ITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVT 120 TQA GVWFAKK T YGQ FTAILD DIFLEIVTNP GFAFTHS NR WRKTRS t usage_00002.pdb 121 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNHGNFKAFL 180 usage_00044.pdb 121 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 180 usage_00045.pdb 120 SGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNSEVEVKSITDFVKNNGNIKAFI 179 usage_00048.pdb 121 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 180 usage_00050.pdb 120 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNHGNFKAFL 179 usage_00051.pdb 120 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNHGNFKAFL 179 usage_00061.pdb 120 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFL 179 usage_00072.pdb 106 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNHGNFKAFL 165 usage_00073.pdb 106 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNHGNFKAFL 165 usage_00081.pdb 106 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 165 usage_00082.pdb 120 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 179 usage_00083.pdb 121 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 180 usage_00084.pdb 121 AGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFI 180 usage_00100.pdb 121 SSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFL 180 SLC GvD NRNWDAGFG GASS PCsETYHGK aNSEVEVKSIvDFVK hGN KAF usage_00002.pdb 181 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 240 usage_00044.pdb 181 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 240 usage_00045.pdb 180 SIHSYSQLLLYPYGYKTQSPADKSELNQIAKSAVAALKSLYGTSYKYGSIITVIYQASGG 239 usage_00048.pdb 181 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 240 usage_00050.pdb 180 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 239 usage_00051.pdb 180 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 239 usage_00061.pdb 180 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 239 usage_00072.pdb 166 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 225 usage_00073.pdb 166 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 225 usage_00081.pdb 166 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 225 usage_00082.pdb 180 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 239 usage_00083.pdb 181 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 240 usage_00084.pdb 181 SIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGS 240 usage_00100.pdb 181 SIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSIITTIYQASGG 240 SIHSYSQLL YPYGY T pD EL Q K AV AL SLYGT YGSII IYQASG usage_00002.pdb 241 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 294 usage_00044.pdb 241 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTLNH 294 usage_00045.pdb 240 VIDWTYNQGIKYSFSFELRDTGRRGFLLPASQIIPTAQETWLALLTIMEHTLN- 292 usage_00048.pdb 241 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTLNH 294 usage_00050.pdb 240 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 293 usage_00051.pdb 240 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 293 usage_00061.pdb 240 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 293 usage_00072.pdb 226 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 279 usage_00073.pdb 226 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTVNN 279 usage_00081.pdb 226 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTLNH 279 usage_00082.pdb 240 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTLN- 292 usage_00083.pdb 241 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTL-- 292 usage_00084.pdb 241 TIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTL-- 292 usage_00100.pdb 241 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTV-- 292 IDW Y QGIKYSFtFELRDTGRyGFLLPASQIIPTA ETWL LTIMEHT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################