################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:37 2021 # Report_file: c_0006_8.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00119.pdb # 2: usage_00120.pdb # 3: usage_00121.pdb # 4: usage_00122.pdb # 5: usage_00123.pdb # 6: usage_00124.pdb # 7: usage_00125.pdb # 8: usage_00126.pdb # 9: usage_00127.pdb # 10: usage_00128.pdb # 11: usage_00129.pdb # # Length: 157 # Identity: 123/157 ( 78.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 123/157 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/157 ( 21.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00119.pdb 1 ------CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 54 usage_00120.pdb 1 -----FCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 55 usage_00121.pdb 1 ------CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 54 usage_00122.pdb 1 TKVWQFCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 60 usage_00123.pdb 1 -----FCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 55 usage_00124.pdb 1 TKVWQFCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 60 usage_00125.pdb 1 ------CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 54 usage_00126.pdb 1 ------CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 54 usage_00127.pdb 1 -----FCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 55 usage_00128.pdb 1 ------CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 54 usage_00129.pdb 1 TKVWQFCVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN 60 CVILAGAVIGRNCNICANSLIENDVVIGDNVTIKSGVQIWDGIHIQDDVFIGPN usage_00119.pdb 55 VTFTND-------KLKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 107 usage_00120.pdb 56 VTFTNDKQPR-S--LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 112 usage_00121.pdb 55 VTFTN---------LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 105 usage_00122.pdb 61 VTFTN----------KTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 110 usage_00123.pdb 56 VTFTNDKQPRY---LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 112 usage_00124.pdb 61 VTFTNDKQPR-SKI-KTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 118 usage_00125.pdb 55 VTFTN----------KTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 104 usage_00126.pdb 55 VTFTN---------LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 105 usage_00127.pdb 56 VTFTN---------LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 106 usage_00128.pdb 55 VTFTND--------LKTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 106 usage_00129.pdb 61 VTFTN----------KTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI 110 VTFTN KTIVKKGASIGANSTILPGILIGENAMVGAGAVITKNVPDNAIVI usage_00119.pdb 108 GNPGRITGYVEANNFELKLQMSKVKGVSLHK------ 138 usage_00120.pdb 113 GNPGRITGYVEA-NFELKLQMSKVKGVSLHK------ 142 usage_00121.pdb 106 GNPGRITGYVEA--FELKLQMSKVKGVSLHKFHLVND 140 usage_00122.pdb 111 GNPGRITGYVEA-NFELKLQM---------------- 130 usage_00123.pdb 113 GNPGRITGYVEANNFELKLQMSKVKGVSLH------- 142 usage_00124.pdb 119 GNPGRITGYVEA--FELKLQMSK-------------- 139 usage_00125.pdb 105 GNPGRITGYVEANNFELKLQMSKVKGVSLHK------ 135 usage_00126.pdb 106 GNPGRITGYVEA--FELKLQMSKVKGVSLHK------ 134 usage_00127.pdb 107 GNPGRITGYVEA-NFELKLQMSKVKGVSLHK------ 136 usage_00128.pdb 107 GNPGRITGYVEA-NFELKLQMSKVKGVSLHK------ 136 usage_00129.pdb 111 GNPGRITGYVEANNFELKLQMSK-------------- 133 GNPGRITGYVEA FELKLQM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################