################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:04 2021 # Report_file: c_1121_30.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00138.pdb # 2: usage_00139.pdb # 3: usage_00140.pdb # 4: usage_00141.pdb # 5: usage_00142.pdb # 6: usage_00143.pdb # 7: usage_00504.pdb # 8: usage_00505.pdb # # Length: 135 # Identity: 114/135 ( 84.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/135 ( 84.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/135 ( 14.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00138.pdb 1 -DLRIGIYKIVSDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 56 usage_00139.pdb 1 GDLRIGIYKIVSDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 57 usage_00140.pdb 1 -----------SDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 46 usage_00141.pdb 1 ---------IVSDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 48 usage_00142.pdb 1 ----------VSDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 47 usage_00143.pdb 1 -----------SDLE-RGDEAENIAERAILLAEEPPLKPYVNINF-SEIVK-EVNDSVIS 46 usage_00504.pdb 1 -----I----VSDLERMGDEAENIAERAILLAEEPPLKPYVNINFMSEIVKEMVNDSVIS 51 usage_00505.pdb 1 -----I----VSDLERMGDEAENIAERAILLAEEPPLKPYVNINFMSEIVKEMVNDSVIS 51 SDLE GDEAENIAERAILLAEEPPLKPYVNINF SEIVK VNDSVIS usage_00138.pdb 57 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 114 usage_00139.pdb 58 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 115 usage_00140.pdb 47 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 104 usage_00141.pdb 49 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 106 usage_00142.pdb 48 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 105 usage_00143.pdb 47 FIQQDTLLAKKVIEKDDTVDELYHQLEREL-TYVLEDPRNIKRA-HLSFVARHYERIADH 104 usage_00504.pdb 52 FIQQDTLLAKKVIEKDDTVDELYHQLERELMTYVLEDPRNIKRAMHLSFVARHYERIADH 111 usage_00505.pdb 52 FIQQDTLLAKKVIEKDDTVDELYHQLERELMTYVLEDPRNIKRAMHLSFVARHYERIADH 111 FIQQDTLLAKKVIEKDDTVDELYHQLEREL TYVLEDPRNIKRA HLSFVARHYERIADH usage_00138.pdb 115 AENVAEAAIYLSEGE 129 usage_00139.pdb 116 AENVAEAAIYLSEG- 129 usage_00140.pdb 105 AENVAEAAIYLSEGE 119 usage_00141.pdb 107 AENVAEAAIYLS--- 118 usage_00142.pdb 106 AENVAEAAIYLSEGE 120 usage_00143.pdb 105 AENVAEAAIYLSE-- 117 usage_00504.pdb 112 AENVAEAAIYLS--- 123 usage_00505.pdb 112 AENVAEAAIYLS--- 123 AENVAEAAIYLS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################