################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:11:34 2021 # Report_file: c_0324_3.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00066.pdb # 2: usage_00067.pdb # 3: usage_00169.pdb # 4: usage_00178.pdb # 5: usage_00179.pdb # # Length: 120 # Identity: 28/120 ( 23.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/120 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/120 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 --KFDEELNKWKNLKAYE-DTKYLKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGI 57 usage_00067.pdb 1 --KFDEELNKWKNLKAYE-DTKYLKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGI 57 usage_00169.pdb 1 AAEREEFGTSVKNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLGV-E-FDHI 58 usage_00178.pdb 1 --KFDEELNKWKNLKAYE-DTKYLKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGI 57 usage_00179.pdb 1 --KFDEELNKWKNLKAYE-DTKYLKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGI 57 kfdEelnkwKNlkAye dtkyLkeiseiaevyaLSNgsiNEvKqhlernGl r FkgI usage_00066.pdb 58 FSAESVKEYKPSPKVYKYFLDSIG---AK--EAFLVSSNAF-DVIGAKNAGMRSIFVN-- 109 usage_00067.pdb 58 FSAESVKEYKPSPKVYKYFLDSIG---AK--EAFLVSSNAF-DVIGAKNAGMRSIFVN-- 109 usage_00169.pdb 59 ITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRR 118 usage_00178.pdb 58 FSAESVKEYKPSPKVYKYFLDSIG---AK--EAFLVSSNAF-DVIGAKNAGMRSIFVN-- 109 usage_00179.pdb 58 FSAESVKEYKPSPKVYKYFLDSIG---AK--EAFLVSSNAF-DVIGAKNAGMRSIFVN-- 109 fsAesVkeYKPsPkvykYflDsig ak eaflvssnaf DvIgAknAGmrSifvn #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################