################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:47:16 2021 # Report_file: c_0590_15.html ################################################################################################ #==================================== # Aligned_structures: 22 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00042.pdb # 7: usage_00057.pdb # 8: usage_00114.pdb # 9: usage_00115.pdb # 10: usage_00116.pdb # 11: usage_00121.pdb # 12: usage_00178.pdb # 13: usage_00179.pdb # 14: usage_00180.pdb # 15: usage_00203.pdb # 16: usage_00218.pdb # 17: usage_00229.pdb # 18: usage_00240.pdb # 19: usage_00322.pdb # 20: usage_00323.pdb # 21: usage_00342.pdb # 22: usage_00343.pdb # # Length: 99 # Identity: 0/ 99 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 99 ( 2.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 99 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 --RNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 53 usage_00027.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00039.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00040.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00041.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00042.pdb 1 --RNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 53 usage_00057.pdb 1 ---RVVLVVGVNGVGK-TTTIAKLGRYYQN-LGKKVMFCAGDTFRAAGGT---QLSEWGK 52 usage_00114.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00115.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00116.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00121.pdb 1 GTVPPARVLVF----GVGVAGLQAIATAKR-LGAVVMATD-V--------RA-ATKEQVE 45 usage_00178.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00179.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00180.pdb 1 --RNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 53 usage_00203.pdb 1 ---AVVLMAGLQGAGK-TTSVGKLGKFLREKHKKKVLVVSADVYRPA---AIKQLETLAE 53 usage_00218.pdb 1 --IFVVFSS------D-PEILKEIVREIKR-QGVRVVLLYSD-QDEK---RRRERLEEFE 46 usage_00229.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00240.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00322.pdb 1 -KQNVIMFVGLQGSGK-TTTCSKLAYYYQR-KGWKTCLICADTFRAG---AFDQLKQNAT 54 usage_00323.pdb 1 --PFIIMLVGVQGSGK-TTTAGKLAYFYKK-RGYKVGLVAADVYRPA---AYDQLLQLGN 53 usage_00342.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 usage_00343.pdb 1 -DRNLWFLVGLQGSGK-TTTAAKLALYYKG-KGRRPLLVAADTQRPA---AREQLRLLGE 54 g d usage_00026.pdb 54 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 81 usage_00027.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00039.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00040.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00041.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00042.pdb 54 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 81 usage_00057.pdb 53 RLSIPVIQGP-----EG----TDPAALAYDAVQAMKA-- 80 usage_00114.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARLE- 83 usage_00115.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARLE- 83 usage_00116.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARLE- 83 usage_00121.pdb 46 SLGGKFITV-AGGYAKEMGEE-FRKKQAEAVL------- 75 usage_00178.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00179.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00180.pdb 54 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 81 usage_00203.pdb 54 QVGVDFFPSD-----VG----QKPVDIVNAALKEAKLK- 82 usage_00218.pdb 47 KQGVDVRTV------------EDKEDFRENIREIWER-- 71 usage_00229.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00240.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00322.pdb 55 KARIPFYGSY-----TE----MDPVIIASEGVEKFKNEN 84 usage_00323.pdb 54 QIGVQVYGEP-----NN----QNPIEIAKKGVDIFVKNK 83 usage_00342.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARL-- 82 usage_00343.pdb 55 KVGVPVLEVM-----DG----ESPESIRRRVEEKARLEA 84 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################