################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:19 2021 # Report_file: c_1111_26.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00126.pdb # 2: usage_00381.pdb # 3: usage_00382.pdb # 4: usage_00383.pdb # 5: usage_00682.pdb # 6: usage_00761.pdb # 7: usage_00762.pdb # # Length: 84 # Identity: 54/ 84 ( 64.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 84 ( 73.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 84 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00126.pdb 1 EPYLTKFLNTAKDRNRWEEPGQQLYNVEATSYALLALLLLKDFDSVPPVVRWLNDERYYG 60 usage_00381.pdb 1 GPLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ---- 56 usage_00382.pdb 1 GPLLNKFLTTAKDKNRWEDP-KQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQ---- 55 usage_00383.pdb 1 GPLLNKFLTTAKD--RWEDPGKQLYNVEATSYALLALLQ-KDF-FVPPVVRWLNEQRYYG 56 usage_00682.pdb 1 --RLTKFLNTAKEKNRWEEPNQKLYNVEATSYALLALLARKDYDTTPPVVRWLNEQRYYG 58 usage_00761.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYG 59 usage_00762.pdb 1 -PLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYG 59 L KFL TAKd RWE P qLYNVEATSYALLALL KDf vPPVVRWLNeq usage_00126.pdb 61 GGYGSTQATFMVFQALAQYRAD-- 82 usage_00381.pdb 57 -GYGSTQATFMVFQALAQYQK--- 76 usage_00382.pdb 56 GGYGSTQATFMVFQALAQYQKD-- 77 usage_00383.pdb 57 GGYGSTQATFMVFQALAQYQK--- 77 usage_00682.pdb 59 GGYGSTQATFMVFQALAQYQKDVP 82 usage_00761.pdb 60 GGYGSTQATFMVFQALAQYQKD-- 81 usage_00762.pdb 60 GGYGSTQATFMVFQALAQYQK--- 80 GYGSTQATFMVFQALAQYqk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################