################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:05:06 2021 # Report_file: c_1434_228.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00050.pdb # 2: usage_00409.pdb # 3: usage_00410.pdb # 4: usage_00521.pdb # 5: usage_00522.pdb # 6: usage_00523.pdb # 7: usage_00524.pdb # 8: usage_00801.pdb # 9: usage_00802.pdb # 10: usage_01904.pdb # 11: usage_01905.pdb # 12: usage_01906.pdb # 13: usage_01907.pdb # # Length: 129 # Identity: 50/129 ( 38.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 50/129 ( 38.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/129 ( 7.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00050.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00409.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00410.pdb 1 ----GQPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 56 usage_00521.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00522.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00523.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00524.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_00801.pdb 1 ----GQYVSMAMDHLNIALVTMMNLANRRIDRFMDKSNSNGLPPFLCAENAGLRLGLMGG 56 usage_00802.pdb 1 ----GQYVSMAMDHLNIALVTMMNLANRRIDRFMDKSNSNGLPPFLCAENAGLRLGLMGG 56 usage_01904.pdb 1 ANFHGQPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 60 usage_01905.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_01906.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 usage_01907.pdb 1 -----QPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVSGDPGLHSGFAGA 55 Q AMD IAL LA R I R S GLP FL GL G G usage_00050.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00409.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00410.pdb 57 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 115 usage_00521.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00522.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00523.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00524.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_00801.pdb 57 QFMTASITAESRASCMPMSIQSLSTTGDFQDIVSFGLVAARRVREQLKNLKYVFSFELLC 116 usage_00802.pdb 57 QFMTASITAESRASCMPMSIQSLSTTGDFQDIVSFGLVAARRVREQLKNLKYVFSFELLC 116 usage_01904.pdb 61 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 119 usage_01905.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_01906.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 usage_01907.pdb 56 QYPATALVAENRTI-GPASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLA 114 Q AE R P S QS GD QD VS GL AR R L N E L usage_00050.pdb 115 AAQAVDISG 123 usage_00409.pdb 115 AAQAVDISG 123 usage_00410.pdb 116 AAQAVDISG 124 usage_00521.pdb 115 AAQAVDI-- 121 usage_00522.pdb 115 AAQAVD--- 120 usage_00523.pdb 115 AAQAVDISG 123 usage_00524.pdb 115 AAQAVDISG 123 usage_00801.pdb 117 ACQAVDIR- 124 usage_00802.pdb 117 ACQAVDIR- 124 usage_01904.pdb 120 AAQAVDI-- 126 usage_01905.pdb 115 AAQAVDISG 123 usage_01906.pdb 115 AAQAVDISG 123 usage_01907.pdb 115 AAQAVDISG 123 A QAVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################