################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:08 2021 # Report_file: c_1396_40.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00307.pdb # 2: usage_00308.pdb # 3: usage_00617.pdb # 4: usage_01078.pdb # 5: usage_01080.pdb # 6: usage_01081.pdb # 7: usage_01613.pdb # 8: usage_01614.pdb # 9: usage_01762.pdb # # Length: 60 # Identity: 11/ 60 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 60 ( 26.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 60 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00307.pdb 1 ----KFSDVEKLLSFFDKYPILGEKAKDLQDFCSVSDLMKSKTHLTEEGVAKIRKIKEGM 56 usage_00308.pdb 1 -----FSDVEKLLSFFDKYPILGEKAKDLQDFCSVSDLMKSKTHLTEEGVAKIRKIKEGM 55 usage_00617.pdb 1 NIEQIVNK---IIPFFEKYTLFSQKRGDFILFCKVVELIKNKEHLTLNGLMKILSIKAAM 57 usage_01078.pdb 1 -----------IIPFFHQYKIIGSKYGDYMDWCKIALIMQNKNHLTPEGLNEIRALKGGM 49 usage_01080.pdb 1 -----------IIPFFHQYKIIGSAYGDYQDWCKIALIMQNKNHLTPEGLNEIRALKGGM 49 usage_01081.pdb 1 -----------IIPFFHQYKIIGSAYGDYQDWCKIALIMQNKNHLTPEGLNEIRALKGGM 49 usage_01613.pdb 1 -----------IIPFFHQYKIIGSKYGDYQDWCKIALIMQNKNHLTPEGLNEIRALKGGM 49 usage_01614.pdb 1 -----------IIPFFHQYKIIGSKYGDYQDWCKIALIMQNKNHLTPEGLNEIRALKGG- 48 usage_01762.pdb 1 -----------IVPFFIKYPLKGNKNLDFTDFCEVVRLMENKSHLTKEGLDQIKKIRNRM 49 FF Y g D d C m K HLT eG I k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################