################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:38 2021 # Report_file: c_0407_25.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00018.pdb # 4: usage_00101.pdb # 5: usage_00173.pdb # # Length: 108 # Identity: 2/108 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/108 ( 5.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/108 ( 44.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 PLQVEP--PEPVVAVALGASRQLTCRLAC-A---DRGASVQWRGLD----TSLGAV---- 46 usage_00004.pdb 1 PLQVEP--PEPVVAVALGASRQLTCRLAC-A---DRGASVQWRGLD----TSLGAV---- 46 usage_00018.pdb 1 PPRFSI--PPTNHEIMPGGSVNITCVAVG-S---P-MPYVKWMLGA----ED--LTPED- 46 usage_00101.pdb 1 LKVTQPE---KSVSVAAGDSTVLNCTLTSLL---P-VGPIKWYRGVGQSRLL--IYSFTG 51 usage_00173.pdb 1 NIQVTN-HSQ--LFQN--MTCELHLTCSV--EDADDNVSFRWEALG----NT--LS---- 43 s l c W usage_00003.pdb 47 ---------QS-----D-TGRSVLTVR-NASLSAAGTRVCVGS--C-G 75 usage_00004.pdb 47 ---------QS-----D-TGRSVLTVR-NASLSAAGTRVCVGS--C-G 75 usage_00018.pdb 47 --------------DMP-IGRNVLELN-DVRQ--SANYTCVAM--S-T 73 usage_00101.pdb 52 EHFPRVTNVSDATK--RNNMDFSIRIS-NVTPEDAGTYYCVKFQKGP- 95 usage_00173.pdb 44 ----------------S-QPNLTVSWDPRISS--EQDYTCIAE--N-- 68 Cv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################