################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:58:03 2021 # Report_file: c_1255_54.html ################################################################################################ #==================================== # Aligned_structures: 50 # 1: usage_00176.pdb # 2: usage_00333.pdb # 3: usage_00520.pdb # 4: usage_00521.pdb # 5: usage_00522.pdb # 6: usage_00524.pdb # 7: usage_00525.pdb # 8: usage_00526.pdb # 9: usage_00527.pdb # 10: usage_00538.pdb # 11: usage_00540.pdb # 12: usage_00542.pdb # 13: usage_00559.pdb # 14: usage_00561.pdb # 15: usage_00604.pdb # 16: usage_00644.pdb # 17: usage_00739.pdb # 18: usage_00740.pdb # 19: usage_01048.pdb # 20: usage_01070.pdb # 21: usage_01072.pdb # 22: usage_01074.pdb # 23: usage_01075.pdb # 24: usage_01076.pdb # 25: usage_01077.pdb # 26: usage_01078.pdb # 27: usage_01079.pdb # 28: usage_01188.pdb # 29: usage_01296.pdb # 30: usage_01299.pdb # 31: usage_01300.pdb # 32: usage_01315.pdb # 33: usage_01318.pdb # 34: usage_01322.pdb # 35: usage_01490.pdb # 36: usage_01542.pdb # 37: usage_01543.pdb # 38: usage_01544.pdb # 39: usage_01546.pdb # 40: usage_01547.pdb # 41: usage_01548.pdb # 42: usage_01549.pdb # 43: usage_01599.pdb # 44: usage_01600.pdb # 45: usage_01601.pdb # 46: usage_01626.pdb # 47: usage_01627.pdb # 48: usage_01699.pdb # 49: usage_01711.pdb # 50: usage_01712.pdb # # Length: 58 # Identity: 2/ 58 ( 3.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 58 ( 34.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 58 ( 46.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVY----- 38 usage_00333.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_00520.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00521.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_00522.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00524.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00525.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_00526.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00527.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00538.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_00540.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00542.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00559.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_00561.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_00604.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_00644.pdb 1 ---S-----GIAIKLA--TGANALDTAKAIRQTIANLEPFM----PQGMKVVYPY--- 41 usage_00739.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPYDTT 47 usage_00740.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_01048.pdb 1 ----GPEIRKGVNLPGAAVDLPAV------SEKDIQDLKFGVEQDVDMVFAS------ 42 usage_01070.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01072.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01074.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01075.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_01076.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_01077.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYP---- 42 usage_01078.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_01079.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_01188.pdb 1 --AS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 42 usage_01296.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYP---- 39 usage_01299.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01300.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPYDTT 43 usage_01315.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPYDTT 44 usage_01318.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_01322.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPYDTT 44 usage_01490.pdb 1 ---------GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 40 usage_01542.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01543.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01544.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01546.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01547.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01548.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01549.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_01599.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01600.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01601.pdb 1 ---S-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 41 usage_01626.pdb 1 SPAS-----GIAIKLA--TGANALDTAKAIRQTIANLEPFM----PQGMKVVYPY--- 44 usage_01627.pdb 1 -PAS-----GIAIKLA--TGANALDTAKAIRQTIANLEPFM----PQGMKVVYPY--- 43 usage_01699.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 usage_01711.pdb 1 QPAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 44 usage_01712.pdb 1 -PAS-----GLGIKLA--TGANALDTAAAIRAELAKMEPFF----PSGLKIVYPY--- 43 g ikla tganAl r a epF p g k v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################