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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:04:28 2021
# Report_file: c_0270_21.html
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#====================================
# Aligned_structures: 4
#   1: usage_00008.pdb
#   2: usage_00009.pdb
#   3: usage_00010.pdb
#   4: usage_00280.pdb
#
# Length:        270
# Identity:       11/270 (  4.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    127/270 ( 47.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          143/270 ( 53.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  TTSERVVDLLNQAALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKS---IE   57
usage_00009.pdb         1  -----------------------LYKVALQWMVKS--------------------RVISE   17
usage_00010.pdb         1  -----------------------LYKVALQWMVKS--------------------RVISE   17
usage_00280.pdb         1  -----------------------LYKVALQWMVKS---------------------VISE   16
                                                  lyKvalqwmvks                       sE

usage_00008.pdb        58  VRKFVIGFIEEACKRDIELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVA-LQ----  112
usage_00009.pdb        18  LQEACWD-----------MVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSP-RMAD   65
usage_00010.pdb        18  LQEACWD-----------MVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSP-RMAD   65
usage_00280.pdb        17  LQEACWD-----------MVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSP-RMAD   64
                           lqeacwd           mvsamagdiilLLdsdNdgirthAIkfvegLivtl p     

usage_00008.pdb       113  -----------WMVKSR-VI----SELQEACWDMVSAMAGDIILLLDS-DNDGIRTHAIK  155
usage_00009.pdb        66  SEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVH-P-AISSINLTTALG  123
usage_00010.pdb        66  SEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVH-P-AISSINLTTALG  123
usage_00280.pdb        65  SEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVH----ISSINLTTALG  120
                                      sldrip dh    ynvlweegkaaleqllkfmvh    issinlTtAlg

usage_00008.pdb       156  FVEGLIVTLSP--------------------RMADSEIPRRQEHDI--------------  181
usage_00009.pdb       124  SLANIARQRP-MFMSEVIQAYETLHANLPPTLAKSQV--SSVRKN-LKLHLLSVLKHPAS  179
usage_00010.pdb       124  SLANIARQRP-MFMSEVIQAYETLHANLPPTLAKSQV--SSVRKN-LKLHLLSVLKHPAS  179
usage_00280.pdb       121  SLANIARQRP-MFMSEVIQAYETLHAN----LAKSQV--SSVRKN-LKLHLLSVLKHPAS  172
                           slaniarqrp                     laksqv  ssvrkn               

usage_00008.pdb       182  ---------SLDRIPRD---HPYIQ-----  194
usage_00009.pdb       180  LEFQAQITTLLVDLGT-PQAE----IARNM  204
usage_00010.pdb       180  LEFQAQITTLLVDLGT-PQAE----IARNM  204
usage_00280.pdb       173  LEFQAQITTLLVDLGT-PQAE----IARNM  197
                                    lLvdlgt    e         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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