################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:52 2021 # Report_file: c_1148_201.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_02875.pdb # 2: usage_02876.pdb # 3: usage_03009.pdb # 4: usage_03010.pdb # 5: usage_03013.pdb # 6: usage_03014.pdb # 7: usage_03015.pdb # 8: usage_03016.pdb # 9: usage_03415.pdb # 10: usage_04001.pdb # 11: usage_04002.pdb # 12: usage_04003.pdb # 13: usage_04004.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 44 ( 36.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 44 ( 63.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_02875.pdb 1 QMVLTSIDCPTC--GRKMGIRTASTGVFLGC------------- 29 usage_02876.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVVT-- 29 usage_03009.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVVTL- 30 usage_03010.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVVT-- 29 usage_03013.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVVTL- 30 usage_03014.pdb 1 -------------YTINIMEL-KTNGPRKIGYWSEVDKMVVTL- 29 usage_03015.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVVTL- 30 usage_03016.pdb 1 -------------YTINIMEL-KTNGPRKIGYWSEVDKMVVTLT 30 usage_03415.pdb 1 -------------YTINIMEL-KTNGPRKIGYWSEVDKMVLTE- 29 usage_04001.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVLTE- 30 usage_04002.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVLTE- 30 usage_04003.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVLTE- 30 usage_04004.pdb 1 ------------NYTINIMEL-KTNGPRKIGYWSEVDKMVLTE- 30 tinimel ktnGprkig #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################