################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:17:05 2021 # Report_file: c_1260_48.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00003.pdb # 2: usage_00009.pdb # 3: usage_00144.pdb # 4: usage_00145.pdb # 5: usage_00212.pdb # 6: usage_00332.pdb # 7: usage_00333.pdb # 8: usage_00643.pdb # 9: usage_00863.pdb # 10: usage_00864.pdb # 11: usage_01076.pdb # 12: usage_01241.pdb # 13: usage_01242.pdb # 14: usage_01248.pdb # 15: usage_01335.pdb # 16: usage_01407.pdb # 17: usage_01408.pdb # # Length: 36 # Identity: 5/ 36 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 36 ( 41.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/ 36 ( 13.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_00009.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_00144.pdb 1 --SLTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 32 usage_00145.pdb 1 -ASLTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 33 usage_00212.pdb 1 --SLTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 32 usage_00332.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_00333.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_00643.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_00863.pdb 1 EASLTGAGATFPAPVYAKWADSYQKETGNKINY-Q- 34 usage_00864.pdb 1 EASLTGAGATFPAPVYAKWADSYQKETGNKINY-Q- 34 usage_01076.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_01241.pdb 1 --DVTGAGASFIYPVMSKWSADYNAATKKQVNY-Q- 32 usage_01242.pdb 1 --DVTGAGASFIYPVMSKWSADYNAATKKQVNY-Q- 32 usage_01248.pdb 1 -ESITAVGSTALQPLVEAAGEQYTGEHLGTFINVQG 35 usage_01335.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_01407.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 usage_01408.pdb 1 ---LTGAGATFPAPVYAKWADTYQKETGNKVNY-Q- 31 TgaGa f Pv kw Y t ny Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################