################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:59 2021 # Report_file: c_0946_141.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00098.pdb # 2: usage_00184.pdb # 3: usage_00215.pdb # 4: usage_00637.pdb # 5: usage_00729.pdb # 6: usage_01387.pdb # 7: usage_01388.pdb # # Length: 55 # Identity: 25/ 55 ( 45.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 55 ( 45.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 55 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 -LNKRSTPEIATRPKVNGQGGRMEFSWTLLDMWDTINFESTGNLIAPEYGFKI-- 52 usage_00184.pdb 1 TLNQRLVPRIA--------SGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVK 47 usage_00215.pdb 1 --NQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKI-- 51 usage_00637.pdb 1 --NQRLVPEIATRPKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPE------- 46 usage_00729.pdb 1 --NQRLVPRIATRSKVKGLSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKI-- 51 usage_01387.pdb 1 --NKRSTPEIATRPKVNGQGGRMEFSWTLLDMWDTINFESTGNLIAPEYGFKI-- 51 usage_01388.pdb 1 --NKRSTPEIATRPKVNGQGGRMEFSWTLLDMWDTINFESTGNLIAPEYGFKI-- 51 N R P IA GRMEF WT L D INFES GN IAPE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################