################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:36 2021 # Report_file: c_0935_156.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00079.pdb # 2: usage_00703.pdb # 3: usage_00815.pdb # 4: usage_00996.pdb # 5: usage_01535.pdb # # Length: 40 # Identity: 6/ 40 ( 15.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 40 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 40 ( 17.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 SYRDIDPSNADVYAYTRSQDGETYLVVVNFKAEPRSFT-- 38 usage_00703.pdb 1 RLVTFNTNNKHIIGYIRN-N--ALLAFGNFSEYPQTVT-- 35 usage_00815.pdb 1 TFRELGGSNPSVLAYIREVTTDAVLCVNNLSRFPQPIE-- 38 usage_00996.pdb 1 --VTFNTNNKHIIGYIRN-N--ALLAFGNFSEYPQTVT-- 33 usage_01535.pdb 1 TFRELGGSNPSVLAYIREVTTDAVLCVNNLSRFPQPIELN 40 N YiR a L N s Pq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################