################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:54 2021 # Report_file: c_0510_3.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00063.pdb # 2: usage_00291.pdb # 3: usage_00292.pdb # 4: usage_00293.pdb # 5: usage_00294.pdb # 6: usage_00305.pdb # # Length: 109 # Identity: 16/109 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/109 ( 45.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/109 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 --SAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQTSGAK 58 usage_00291.pdb 1 GWESEAAMERARQQVASLIG----ADPREIIFTSGATESNNIAIKGVARFY---RS-RK- 51 usage_00292.pdb 1 -HAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFY---RS-RK- 54 usage_00293.pdb 1 -HAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFY---RS-RK- 54 usage_00294.pdb 1 --AYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFY---RS-RK- 53 usage_00305.pdb 1 --GMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETF---EK-RK- 53 g ar a P eIiFTSgaTESnN ik Va rk usage_00063.pdb 59 PHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAA- 106 usage_00291.pdb 52 KHLITTQTEHKCVLDSCRSLEAEGFQVTYLPV--QKSGIIDLKELEAAI 98 usage_00292.pdb 55 KHLITTQTEHKCVLDSCRSLEAEGFQVTYLPV--QKSGIIDLKELEAAI 101 usage_00293.pdb 55 KHLITTQTEHKCVLDSCRSLEAEGFQVTYLPV--QKSGIIDLKELEAAI 101 usage_00294.pdb 54 KHLITTQTEHKCVLDSCRSLEAEGFQVTYLPV--QKSGIIDLKELEAAI 100 usage_00305.pdb 54 RTIITTPIEHKAVLETMKYLSMKGFKVKYVPV--DSRGVVKLEELEKLV 100 h ITt EHk vl L egf v y pv sG l eleaa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################