################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:53 2021 # Report_file: c_1084_118.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00561.pdb # 2: usage_01485.pdb # 3: usage_01486.pdb # 4: usage_01487.pdb # 5: usage_01488.pdb # 6: usage_01489.pdb # 7: usage_01490.pdb # 8: usage_01493.pdb # 9: usage_01494.pdb # 10: usage_01495.pdb # 11: usage_01496.pdb # 12: usage_01886.pdb # 13: usage_01887.pdb # 14: usage_01888.pdb # 15: usage_01889.pdb # 16: usage_01890.pdb # # Length: 62 # Identity: 12/ 62 ( 19.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 62 ( 69.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 62 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00561.pdb 1 ----RVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAG-- 54 usage_01485.pdb 1 ----RAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 usage_01486.pdb 1 -EAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 56 usage_01487.pdb 1 ----RAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 usage_01488.pdb 1 PEAARAMALQGAEILFYPTAIG----------D-SRDHWKRVMQGHAGANLVPLVASNR- 48 usage_01489.pdb 1 PEAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 57 usage_01490.pdb 1 ----RAMALQGAEILFYPTAIG-S--------D-SRDHWKRVMQGHAGANLVPLVASNRI 46 usage_01493.pdb 1 ----RAMALQGAEILFYPTAIG-SEP--QSI-D-SRDHWKRVMQGHAGANLVPLVASNR- 50 usage_01494.pdb 1 ----RAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 usage_01495.pdb 1 PEAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 57 usage_01496.pdb 1 PEAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 57 usage_01886.pdb 1 ----RAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 usage_01887.pdb 1 -EAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 56 usage_01888.pdb 1 ----RAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 usage_01889.pdb 1 PEAARAMALQGAEILFYPTAIG-SEPHDQSI-D-SRDHWKRVMQGHAGANLVPLVASNRI 57 usage_01890.pdb 1 PEAARAMALQGAEILFYPTAIG-SEP----I-D-SRDHWKRVMQGHAGANLVPLVASNRI 53 RaMaLqGAEIlfyptaig d srdHwkrvMQghagaNlvplvAsn usage_00561.pdb -- usage_01485.pdb 54 GN 55 usage_01486.pdb 57 G- 57 usage_01487.pdb 54 G- 54 usage_01488.pdb -- usage_01489.pdb 58 G- 58 usage_01490.pdb 47 G- 47 usage_01493.pdb -- usage_01494.pdb 54 G- 54 usage_01495.pdb 58 G- 58 usage_01496.pdb 58 GN 59 usage_01886.pdb 54 GN 55 usage_01887.pdb 57 GN 58 usage_01888.pdb 54 G- 54 usage_01889.pdb 58 G- 58 usage_01890.pdb 54 G- 54 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################