################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:52 2021 # Report_file: c_0503_8.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00104.pdb # 2: usage_00105.pdb # 3: usage_00108.pdb # 4: usage_00109.pdb # 5: usage_00163.pdb # 6: usage_00164.pdb # # Length: 92 # Identity: 44/ 92 ( 47.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 92 ( 47.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 92 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 -WNIAAAEVINGKAGMQIMGDWAKSEWSAAGKVAGKDYQCVAFPGTQGSFAYNIDSLAMF 59 usage_00105.pdb 1 -WNIAAAEVINGKAGMQIMGDWAKSEWSAAGKVAGKDYQCVAFPGTQGSFAYNIDSLAMF 59 usage_00108.pdb 1 -WNLASAMVIEGKAGLQFMGDWAKGEFVKAGKKPGEDFVCMRYPGTQGAITFNSDMFAMF 59 usage_00109.pdb 1 -WNLASAMVIEGKAGLQFMGDWAKGEFVKAGKKPGEDFVCMRYPGTQGAITFNSDMFAMF 59 usage_00163.pdb 1 -WNIAAAEVINGKAGMQIMGDWAKSEWSAAGKVAGKDYQCVAFPGTQGSFAYNIDSLAMF 59 usage_00164.pdb 1 DWNIAAAEVINGKAGMQIMGDWAKSEWSAAGKVAGKDYQCVAFPGTQGSFAYNIDSLAMF 60 WN A A VI GKAG Q MGDWAK E AGK G D C PGTQG N D AMF usage_00104.pdb 60 KLKDANDIKAQNDLAKVALEPEFQTVFNQNKG 91 usage_00105.pdb 60 KLKDANDIKAQNDLAKVALEPEFQTVFNQNKG 91 usage_00108.pdb 60 KVSED-KVPAQLEMASAIESPTFQSAFNVVKG 90 usage_00109.pdb 60 KVSED-KVPAQLEMASAIESPTFQSAFNVVK- 89 usage_00163.pdb 60 KLKDANDIKAQNDLAKVALEPEFQTVFNQNKG 91 usage_00164.pdb 61 KLKDANDIKAQNDLAKVALEPEFQTVFNQNKG 92 K AQ A P FQ FN K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################