################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:31:48 2021 # Report_file: c_1372_45.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00120.pdb # 2: usage_00813.pdb # 3: usage_00814.pdb # 4: usage_00815.pdb # 5: usage_01333.pdb # 6: usage_01334.pdb # # Length: 67 # Identity: 12/ 67 ( 17.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 67 ( 70.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 67 ( 29.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 --------------GDLLA-KGGVPLLKQALRHLGLPAGYPRPPYPAE-SPLWERFLPVL 44 usage_00813.pdb 1 IQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLI 60 usage_00814.pdb 1 -QEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLI 59 usage_00815.pdb 1 IQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLI 60 usage_01333.pdb 1 IQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLI 60 usage_01334.pdb 1 IQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLI 60 ietvl mGiyPtLKeiLRHrGidAGlPkrPfkpf eahrqtldqli usage_00120.pdb 45 EGLKEEG 51 usage_00813.pdb 61 AKYD--- 64 usage_00814.pdb 60 AKYD--- 63 usage_00815.pdb 61 AKYD--- 64 usage_01333.pdb 61 AKYD--- 64 usage_01334.pdb 61 AKY---- 63 aky #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################