################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:31 2021 # Report_file: c_0792_8.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00113.pdb # 2: usage_00185.pdb # 3: usage_00201.pdb # 4: usage_00294.pdb # 5: usage_00295.pdb # 6: usage_00340.pdb # 7: usage_00347.pdb # 8: usage_00375.pdb # 9: usage_00376.pdb # 10: usage_00377.pdb # 11: usage_00378.pdb # 12: usage_00379.pdb # 13: usage_00380.pdb # 14: usage_00381.pdb # 15: usage_00385.pdb # # Length: 76 # Identity: 6/ 76 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 76 ( 13.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 76 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 KGVLLFGPPGTGKTMIGRCVASQCK---ATFFNISASSLT-SKW-----V----GEGEKL 47 usage_00185.pdb 1 -GILLYGPPGCGKTLLARQIGKMLNA-REPKVVNGPEILNK--Y-----V----GESEAN 47 usage_00201.pdb 1 RGILLYGPPGTGKTLIARAVANETG---AFFFLINGPEIM-SKL-----A----GESESN 47 usage_00294.pdb 1 RGVLLYGPPGTGKTMLVKAVANSTK---AAFIRVNGSEFVH-KY-----L----GEGPRM 47 usage_00295.pdb 1 KGFLLYGPPGVGKTLLAKAVATESN---ANFISIKGPEVL-SKW-----V----GESEKA 47 usage_00340.pdb 1 -GLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPELF-RELKHSLQD----QTMNEK 54 usage_00347.pdb 1 RGVLLYGPPGTGKTMLVKAVANSTK---AAFIRVNGSEFVH-KY-----L----GEGPRM 47 usage_00375.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00376.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00377.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00378.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00379.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00380.pdb 1 KGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKGPELL-TMW-----F----GESEAN 47 usage_00381.pdb 1 RGILLYGPPGCGKTMIAAAVANELD---SEFIHVDAASIM-SKW-----LGEA------- 44 usage_00385.pdb 1 RGVLMYGPPGCGKTMLAKAVAHHTT---AAFIRVVGSEFV-QKY-----LGE-G------ 44 G l GppG GKT a usage_00113.pdb 48 VRALFSVARL------ 57 usage_00185.pdb 48 IRKLFADAEEE-QRRL 62 usage_00201.pdb 48 LRKAFEEAEKN----- 58 usage_00294.pdb 48 VRDVFRLAREN----- 58 usage_00295.pdb 48 IREIFKKAKQVA---- 59 usage_00340.pdb 55 LDYIKK---------- 60 usage_00347.pdb 48 VRDVFRLAREN----- 58 usage_00375.pdb 48 VREIFDKARQA----- 58 usage_00376.pdb 48 VREIFDKARQA----- 58 usage_00377.pdb 48 VREIFDKARQA----- 58 usage_00378.pdb 48 VREIFDKARQA----- 58 usage_00379.pdb 48 VREIFDKARQA----- 58 usage_00380.pdb 48 VREIFDKARQA----- 58 usage_00381.pdb ---------------- usage_00385.pdb ---------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################