################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:01 2021 # Report_file: c_1133_48.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00101.pdb # 2: usage_00387.pdb # 3: usage_00388.pdb # 4: usage_00472.pdb # 5: usage_00647.pdb # 6: usage_00648.pdb # 7: usage_00649.pdb # 8: usage_00650.pdb # 9: usage_00651.pdb # # Length: 68 # Identity: 18/ 68 ( 26.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 68 ( 30.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 68 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00101.pdb 1 ----IASSSLITEWVKGKSLEEAGAIKNSQIAEELEL--PPV--KVHCSILAEDAIKAAI 52 usage_00387.pdb 1 ----IAVSSMLTEMVKGKPIQYALNLTYKDIFEELGG--LPPQKIHCT-NLGLETLHVAI 53 usage_00388.pdb 1 ----IAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQK--IHCT-NLGLETLHVAI 53 usage_00472.pdb 1 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL--PPV--KIHCSILAEDAIKAAI 56 usage_00647.pdb 1 -GSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCL--PPV--KLHCSMLAEDAIKAAL 55 usage_00648.pdb 1 -GSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCL--PPV--KLHCSMLAEDAIKAAL 55 usage_00649.pdb 1 CGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCL--PPV--KLHCSMLAEDAIKAAL 56 usage_00650.pdb 1 CGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCL--PPV--KLHCSMLAEDAIKAAL 56 usage_00651.pdb 1 CGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCL--PPV--KLHCSMLAEDAIKAAL 56 IA SS TE VKGK A dI EL pp L A usage_00101.pdb 53 ADYKAKQG 60 usage_00387.pdb 54 KDYLMKQG 61 usage_00388.pdb 54 KDYLMKQ- 60 usage_00472.pdb 57 ADYKSKRE 64 usage_00647.pdb 56 ADYKL--- 60 usage_00648.pdb 56 ADYKL--- 60 usage_00649.pdb 57 ADYKLKQE 64 usage_00650.pdb 57 ADYKL--- 61 usage_00651.pdb 57 ADYKLKQ- 63 DY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################