################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:07:04 2021 # Report_file: c_1445_205.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00171.pdb # 2: usage_00172.pdb # 3: usage_00173.pdb # 4: usage_00627.pdb # 5: usage_09888.pdb # 6: usage_11226.pdb # 7: usage_16163.pdb # 8: usage_16813.pdb # # Length: 36 # Identity: 1/ 36 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 36 ( 19.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 36 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 GLIISTPTGSTAYSLSAGGPILTPSLD--AITLV-P 33 usage_00172.pdb 1 GLIISTPTGSTAYSLSAGGPILTPSLD--AITLV-P 33 usage_00173.pdb 1 GLIISTPTGSTAYSLSAGGPILTPSLD--AITLV-P 33 usage_00627.pdb 1 GLIIATPTGSTAYSLSAGGPILTPTLD--AIVLV-P 33 usage_09888.pdb 1 GVLVSTPTGSTAYAFSAGGPVLWPDLE--AILVV-P 33 usage_11226.pdb 1 GLCMSTPSGTTAYNKSLGGALMHPSIE--AMQLT-E 33 usage_16163.pdb 1 GVLVSTPTGSTAYAFSAGGPVLWPDLE--AILVV-P 33 usage_16813.pdb 1 LLLRL---------SDSGEPVTSCSYGQGVLTLPSL 27 g s Ggp p a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################