################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:23:46 2021 # Report_file: c_0514_27.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00041.pdb # 2: usage_00234.pdb # 3: usage_00253.pdb # 4: usage_00254.pdb # 5: usage_00302.pdb # 6: usage_00340.pdb # 7: usage_00343.pdb # 8: usage_00368.pdb # 9: usage_00506.pdb # 10: usage_00507.pdb # # Length: 133 # Identity: 70/133 ( 52.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 70/133 ( 52.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/133 ( 10.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00234.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00253.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00254.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00302.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00340.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00343.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00368.pdb 1 GFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHY 60 usage_00506.pdb 1 ----------CKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVCPNDGLCHLDSKNEY 50 usage_00507.pdb 1 GFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVCPNDGLCHLDSKNEY 60 C EKIGWRND HLLVF DA H D LAGIV PNDG CH S N Y usage_00041.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00234.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00253.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00254.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00302.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00340.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00343.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00368.pdb 61 SASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVL 120 usage_00506.pdb 51 SMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNIL 110 usage_00507.pdb 61 SMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNIL 120 S ST YP G KL Q N LIFAVT V LY NY LIPG TVG L DS N L usage_00041.pdb 121 QLIVDAYGK-I-- 130 usage_00234.pdb 121 QLIVDAYGKIRS- 132 usage_00253.pdb 121 QLIVDAYGK---- 129 usage_00254.pdb 121 QLIVDAYGK-I-- 130 usage_00302.pdb 121 QLIVDAYGKIRS- 132 usage_00340.pdb 121 QLIVDAYGKIRSK 133 usage_00343.pdb 121 QLIVDAYGKIRS- 132 usage_00368.pdb 121 QLIVDAYGKIRSK 133 usage_00506.pdb 111 QLIISAYEELRS- 122 usage_00507.pdb 121 QLIISAYEELRSE 133 QLI AY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################