################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:34 2021 # Report_file: c_1442_1106.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00543.pdb # 2: usage_00608.pdb # 3: usage_00610.pdb # 4: usage_01350.pdb # 5: usage_01354.pdb # 6: usage_01466.pdb # 7: usage_05121.pdb # 8: usage_06865.pdb # 9: usage_07733.pdb # 10: usage_08799.pdb # 11: usage_09390.pdb # 12: usage_11802.pdb # 13: usage_17744.pdb # 14: usage_17852.pdb # 15: usage_19439.pdb # # Length: 12 # Identity: 2/ 12 ( 16.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 12 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 12 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00543.pdb 1 ATQTVGGVELP- 11 usage_00608.pdb 1 ATQTVGGVELP- 11 usage_00610.pdb 1 ATQTVGGVELP- 11 usage_01350.pdb 1 ATQTVGGVELN- 11 usage_01354.pdb 1 ATQTVGGVELP- 11 usage_01466.pdb 1 ATQTVGGVELP- 11 usage_05121.pdb 1 ATQVQGGVELP- 11 usage_06865.pdb 1 ATQTVGGVELP- 11 usage_07733.pdb 1 ATQTVGGVELP- 11 usage_08799.pdb 1 ATQTVGGVELP- 11 usage_09390.pdb 1 APESVGF-ARMD 11 usage_11802.pdb 1 ATQTVGGVDLP- 11 usage_17744.pdb 1 ATQTVGGVELP- 11 usage_17852.pdb 1 ATQTVGGVELP- 11 usage_19439.pdb 1 APESVGF-ARMD 11 A vG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################