################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:22 2021 # Report_file: c_0834_45.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00087.pdb # 2: usage_00262.pdb # 3: usage_00263.pdb # 4: usage_00264.pdb # 5: usage_00265.pdb # 6: usage_00266.pdb # 7: usage_00495.pdb # # Length: 79 # Identity: 4/ 79 ( 5.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 79 ( 36.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 79 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 SVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEF----------EKLTDLAKHKCTIA 50 usage_00262.pdb 1 AGIGGLAYAGIPVTHREVNHAVTFLTGH--------DSS-GVPD-RINWQGIASGSPVIV 50 usage_00263.pdb 1 --IGGLAYAGIPVTHREVNHAVTFLTGH--------DSS-----GRINWQGIASGSPVIV 45 usage_00264.pdb 1 AGIGGLAYAGIPVTHREVNHAVTFLTGH--------DSS-G-PD-RINWQGIASGSPVIV 49 usage_00265.pdb 1 --IGGLAYAGIPVTHREVNHAVTFLTGH--------D--------RINWQGIASGSPVIV 42 usage_00266.pdb 1 --IGGLAYAGIPVTHREVNHAVTFLTGH--------DSSGLVPD-RINWQGIASGSPVIV 49 usage_00495.pdb 1 AASGCSTYAGIPLTHRDLAQSCTFVTGH--------L-Q----L-DLDWAGLARGKQTLV 46 g ayAgip Thr vtf tgh w g A g iv usage_00087.pdb 51 LFLSSTLTKKVMKEFINAG 69 usage_00262.pdb 51 MYMAMKHIGAITANLIAGG 69 usage_00263.pdb 46 MYMAMKHIGAITANLIAGG 64 usage_00264.pdb 50 MYMAMKHIGAITANLIAGG 68 usage_00265.pdb 43 MYMAMKHIGAITANLIAGG 61 usage_00266.pdb 50 MYMAMKHIGAITANLIAGG 68 usage_00495.pdb 47 FYMGLGNLAEIAARLVEHG 65 ym i a li G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################