################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:25:17 2021 # Report_file: c_0054_11.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00189.pdb # 6: usage_00190.pdb # # Length: 221 # Identity: 210/221 ( 95.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 210/221 ( 95.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/221 ( 4.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 PTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 60 usage_00008.pdb 1 --RNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 58 usage_00009.pdb 1 PTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 60 usage_00010.pdb 1 --RNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 58 usage_00189.pdb 1 PTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 60 usage_00190.pdb 1 PTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA 60 RNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVA usage_00007.pdb 61 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 120 usage_00008.pdb 59 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 118 usage_00009.pdb 61 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 120 usage_00010.pdb 59 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 118 usage_00189.pdb 61 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 120 usage_00190.pdb 61 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV 120 SEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILV usage_00007.pdb 121 VDNTFMSPYFQRPLALGADISMYSATKYM---NGHSDVVMGLVSVNCESLHNRLRFLQNS 177 usage_00008.pdb 119 VDNTFMSPYFQRPLALGADISMYSATKYM---NGHSDVVMGLVSVNCESLHNRLRFLQNS 175 usage_00009.pdb 121 VDNTFMSPYFQRPLALGADISMYSATKYM---NGHSDVVMGLVSVNCESLHNRLRFLQNS 177 usage_00010.pdb 119 VDNTFMSPYFQRPLALGADISMYSATKYM---NGHSDVVMGLVSVNCESLHNRLRFLQNS 175 usage_00189.pdb 121 VDNTFMSPYFQRPLALGADISMYSAT---YMNGH-SDVVMGLVSVNCESLHNRLRFLQNS 176 usage_00190.pdb 121 VDNTFMSPYFQRPLALGADISMYSAT---YMNGH-SDVVMGLVSVNCESLHNRLRFLQNS 176 VDNTFMSPYFQRPLALGADISMYSAT SDVVMGLVSVNCESLHNRLRFLQNS usage_00007.pdb 178 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 218 usage_00008.pdb 176 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 216 usage_00009.pdb 178 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 218 usage_00010.pdb 176 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 216 usage_00189.pdb 177 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 217 usage_00190.pdb 177 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 217 LGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################