################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:00 2021 # Report_file: c_0023_5.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00028.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # # Length: 325 # Identity: 317/325 ( 97.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 317/325 ( 97.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/325 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 HPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA 60 usage_00035.pdb 1 HPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA 60 usage_00036.pdb 1 HPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA 60 HPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA usage_00028.pdb 61 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGH--------ADGLILLPYPDPYRPYRND 112 usage_00035.pdb 61 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRND 120 usage_00036.pdb 61 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGH--------ADGLILLPYPDPYRPYRND 112 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGH ADGLILLPYPDPYRPYRND usage_00028.pdb 113 PTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 172 usage_00035.pdb 121 PTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 180 usage_00036.pdb 113 PTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 172 PTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC usage_00028.pdb 173 DEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLH 232 usage_00035.pdb 181 DEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLH 240 usage_00036.pdb 173 DEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLH 232 DEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLH usage_00028.pdb 233 GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMEL 292 usage_00035.pdb 241 GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMEL 300 usage_00036.pdb 233 GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMEL 292 GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMEL usage_00028.pdb 293 VCDRQSREPARAETAKLIYRAYQLG 317 usage_00035.pdb 301 VCDRQSREPARAETAKLIYRAYQLG 325 usage_00036.pdb 293 VCDRQSREPARAETAKLIYRAYQLG 317 VCDRQSREPARAETAKLIYRAYQLG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################