################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 08:33:01 2021 # Report_file: c_1004_17.html ################################################################################################ #==================================== # Aligned_structures: 59 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00009.pdb # 4: usage_00016.pdb # 5: usage_00017.pdb # 6: usage_00021.pdb # 7: usage_00046.pdb # 8: usage_00047.pdb # 9: usage_00048.pdb # 10: usage_00069.pdb # 11: usage_00073.pdb # 12: usage_00077.pdb # 13: usage_00078.pdb # 14: usage_00079.pdb # 15: usage_00083.pdb # 16: usage_00084.pdb # 17: usage_00085.pdb # 18: usage_00086.pdb # 19: usage_00087.pdb # 20: usage_00088.pdb # 21: usage_00089.pdb # 22: usage_00090.pdb # 23: usage_00091.pdb # 24: usage_00092.pdb # 25: usage_00093.pdb # 26: usage_00102.pdb # 27: usage_00103.pdb # 28: usage_00104.pdb # 29: usage_00105.pdb # 30: usage_00106.pdb # 31: usage_00121.pdb # 32: usage_00131.pdb # 33: usage_00132.pdb # 34: usage_00133.pdb # 35: usage_00146.pdb # 36: usage_00147.pdb # 37: usage_00148.pdb # 38: usage_00155.pdb # 39: usage_00164.pdb # 40: usage_00165.pdb # 41: usage_00258.pdb # 42: usage_00259.pdb # 43: usage_00262.pdb # 44: usage_00263.pdb # 45: usage_00280.pdb # 46: usage_00281.pdb # 47: usage_00335.pdb # 48: usage_00336.pdb # 49: usage_00348.pdb # 50: usage_00353.pdb # 51: usage_00355.pdb # 52: usage_00356.pdb # 53: usage_00367.pdb # 54: usage_00377.pdb # 55: usage_00385.pdb # 56: usage_00386.pdb # 57: usage_00403.pdb # 58: usage_00408.pdb # 59: usage_00409.pdb # # Length: 49 # Identity: 19/ 49 ( 38.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 49 ( 81.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 49 ( 16.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00008.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00009.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00016.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00017.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00021.pdb 1 GYVIDHIPSGQGVKILKLFSLTDTKQRVTVGFNLP----KDLIKVE--- 42 usage_00046.pdb 1 GTVIAHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00047.pdb 1 GTVIDAIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00048.pdb 1 -TVIDAIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00069.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00073.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00077.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIEN 49 usage_00078.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00079.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00083.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00084.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00085.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00086.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00087.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00088.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00089.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00090.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00091.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 46 usage_00092.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00093.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 46 usage_00102.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00103.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00104.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00105.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00106.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00121.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00131.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00132.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00133.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00146.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00147.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00148.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00155.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00164.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 46 usage_00165.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00258.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00259.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00262.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00263.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00280.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00281.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00335.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00336.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00348.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00353.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00355.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00356.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00367.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00377.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00385.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 47 usage_00386.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKI-- 46 usage_00403.pdb 1 -TVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 47 usage_00408.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 usage_00409.pdb 1 GTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIE- 48 tVId IPaqiGfKlLsLFkLTeTdQRiTiGlNLP grkdlik #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################