################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:36:32 2021 # Report_file: c_0145_21.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00001.pdb # 2: usage_00013.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00056.pdb # 6: usage_00059.pdb # 7: usage_00088.pdb # 8: usage_00122.pdb # 9: usage_00123.pdb # 10: usage_00211.pdb # 11: usage_00319.pdb # 12: usage_00320.pdb # 13: usage_00351.pdb # 14: usage_00382.pdb # 15: usage_00516.pdb # 16: usage_00556.pdb # # Length: 122 # Identity: 51/122 ( 41.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/122 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/122 ( 9.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 VQLEESGPELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGFEWIGDIYPGGVYTTNN 60 usage_00013.pdb 1 VQLLESGAELMKPGASVKISCKATGYTFSSFWIEWVKQRPGHGLEWIGEILPGSGGTHYN 60 usage_00043.pdb 1 VQLQQSGAELMKPGALVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSINYN 60 usage_00044.pdb 1 VQLLESGAELMKPGASVQISCKATGYTFSEYWIEWVKERPGHGLEWIGEILPGSGRTNYR 60 usage_00056.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYN 60 usage_00059.pdb 1 VQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYN 60 usage_00088.pdb 1 VQLQQSGAELMKPGPSVKISCKATGYSFSTYFIEWIRQRPGHGLEWIGEILPGSDNTNFN 60 usage_00122.pdb 1 VQLEESGPELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGFEWIGDIYPGGVYTTNN 60 usage_00123.pdb 1 VQLEESGPELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGFEWIGDIYPGGVYTTNN 60 usage_00211.pdb 1 -QLQQSGAELMKPGASVKISCKASGYTFSDYWIEWVKQRPGHGLEWIGEILPGSGSTNYH 59 usage_00319.pdb 1 VQLLESGAELMKPGASVQISCKATGYTFSEYWIEWVKERPGHGLEWIGEILPGSGRTNYR 60 usage_00320.pdb 1 VQLQQSGAELMKPGASVKISCKASGYTFSDYWIEWVKQRPGHGLEWIGEILPGSGSTNYH 60 usage_00351.pdb 1 VQLQQSGAELMKPGASVKLSCKAAGYTFTAYWIEWIRQRPGHGLEWIGEILPGSSSTNCN 60 usage_00382.pdb 1 VQLQQSGPELMKPGASVKISCKATGYTFSTSWIEWIKQRPGHGLEWIGEVLPGSGKSNHN 60 usage_00516.pdb 1 VQLLESGAELMKPGASVQISCKATGYTFSEYWIEWVKERPGHGLEWIGEILPGSGRTNYR 60 usage_00556.pdb 1 VQLLESGAELMKPGASVQISCKATGYTFSFYWIEWVKERPGHGLEWIGEILPGSGRTNYR 60 QL SG EL PG sV iSCKA GYtF w W RPGHG EWIG i PG usage_00001.pdb 61 EKFRGKAILTADTSSSTAYMQLSSLTSEDSAVYFCARAGGYYTGG---DYWGQG--TSVT 115 usage_00013.pdb 61 EKFKGKATFTADKSSNTAYMQLSSLTSEDSAVYYCARGHSYYFYDG--DYWGQG--TSVT 116 usage_00043.pdb 61 EKFKGKATFTADTSSNTAYMQLNSLTSEDSAVYYCARNHGSPDFH-VMDYWGQG--TSIT 117 usage_00044.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRGY---SSM---DYWGQG--TSVT 112 usage_00056.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGHSYYFYDG--DYWGQG--TSVT 116 usage_00059.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGHSYYFYDG--DYWGQG--TSVT 116 usage_00088.pdb 61 EKFKDRATFTADTPSNTAYMQLSSLTSEDSAVYYCARPTGR---L---WFSYWGQGTLVT 114 usage_00122.pdb 61 EKFRGKAILTADTSSSTAYMQLSSLTSEDSAVYFCARAGGYYTGG---DYWGQG--TSVT 115 usage_00123.pdb 61 EKFRGKAILTADTSSSTAYMQLSSLTSEDSAVYFCARAGGYYTGG---DYWGQG--TSVT 115 usage_00211.pdb 60 ERFKGKATFTADTSSSTAYMQLNSLTSEDSGVYYCLHGNY---DF---DGWGQG--TTLT 111 usage_00319.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRGYS---SM---DYWGQG--TSVT 112 usage_00320.pdb 61 ERFKGKATFTADTSSSTAYMQLNSLTSEDSGVYYCLHGNY---DF---DGWGQG--TTLT 112 usage_00351.pdb 61 EMFKGKATFTADTSSNSAYMQLSSLTTEDSAIYYCTRDFSGDRSNLYFDVWGTG--TTVT 118 usage_00382.pdb 61 ANFKGRATFTADTASNTAYMQLSSLTSEDSAVYYCAREGSNNNAL---AYWGQG--TLVT 115 usage_00516.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRGYS---SM---DYWGQG--TSVT 112 usage_00556.pdb 61 EKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRGYS---SM---DYWGQG--TSVT 112 e F g A TADt S tAYMQL SLTsEDS vY C wg G T T usage_00001.pdb 116 VS 117 usage_00013.pdb 117 VS 118 usage_00043.pdb 118 VS 119 usage_00044.pdb 113 V- 113 usage_00056.pdb 117 VS 118 usage_00059.pdb 117 VS 118 usage_00088.pdb 115 VS 116 usage_00122.pdb 116 VS 117 usage_00123.pdb 116 VS 117 usage_00211.pdb 112 VS 113 usage_00319.pdb 113 VS 114 usage_00320.pdb 113 VS 114 usage_00351.pdb 119 VS 120 usage_00382.pdb 116 VS 117 usage_00516.pdb 113 VS 114 usage_00556.pdb 113 VS 114 V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################