################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:50:06 2021 # Report_file: c_0212_22.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00060.pdb # 2: usage_00061.pdb # 3: usage_00135.pdb # 4: usage_00193.pdb # 5: usage_00194.pdb # 6: usage_00195.pdb # 7: usage_00209.pdb # 8: usage_00210.pdb # 9: usage_00252.pdb # 10: usage_00253.pdb # 11: usage_00295.pdb # 12: usage_00302.pdb # 13: usage_00304.pdb # 14: usage_00398.pdb # 15: usage_00399.pdb # 16: usage_00400.pdb # 17: usage_00401.pdb # # Length: 102 # Identity: 78/102 ( 76.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/102 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/102 ( 6.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00060.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNLYYYSIHWVRQAPGKGLEWVASISPYSSSTSY 58 usage_00061.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFNLYYYSIHWVRQAPGKGLEWVASISPYSSSTSY 60 usage_00135.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFSIGKSGIHWVRQAPGKGLEWVAVIYPHDGNTAY 60 usage_00193.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISPSYGYTYY 58 usage_00194.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISPSYGYTYY 58 usage_00195.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISPSYGYTYY 58 usage_00209.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNVYSYSIHWVRQAPGKGLEWVASIYSYYGSTYY 58 usage_00210.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNVYSYSIHWVRQAPGKGLEWVASIYSYYGSTYY 58 usage_00252.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNLYSYSMHWVRQAPGKGLEWVAYIYPYSGSTSY 59 usage_00253.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFNLYSYSMHWVRQAPGKGLEWVAYIYPYSGSTSY 60 usage_00295.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSSGSTSY 58 usage_00302.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFSSTWIHWVRQAPGKGLEWVARISPYYYYSDY 59 usage_00304.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNISSYSIHWVRQAPGKGLEWVASISSYYSSTYY 58 usage_00398.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVAYISPSSGSTYY 59 usage_00399.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVAYISPSSGSTYY 59 usage_00400.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVAYISPSSGSTYY 59 usage_00401.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVAYISPSSGSTYY 59 QLVESGGGLVQPGGSLRLSCAASGF HWVRQAPGKGLEWVA I t Y usage_00060.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGR-- 98 usage_00061.pdb 61 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGR-- 100 usage_00135.pdb 61 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAR---- 98 usage_00193.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAR---- 96 usage_00194.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGIWS 100 usage_00195.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAR---- 96 usage_00209.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA----- 95 usage_00210.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA----- 95 usage_00252.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARESS- 100 usage_00253.pdb 61 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARESS- 101 usage_00295.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLTAEDTAVYYCARYGH- 99 usage_00302.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGLG- 100 usage_00304.pdb 59 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQP-- 98 usage_00398.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQ-- 99 usage_00399.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQ-- 99 usage_00400.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQ-- 99 usage_00401.pdb 60 ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQ-- 99 ADSVKGRFTISADTSKNTAYLQMNSLrAEDTAVYYCA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################