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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:18:29 2021
# Report_file: c_1253_29.html
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#====================================
# Aligned_structures: 5
#   1: usage_00410.pdb
#   2: usage_01028.pdb
#   3: usage_01029.pdb
#   4: usage_01030.pdb
#   5: usage_01279.pdb
#
# Length:         39
# Identity:        3/ 39 (  7.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     24/ 39 ( 61.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           12/ 39 ( 30.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00410.pdb         1  GYWIAQVDVRDSERYKD-----YVSTAKPAFERFGANFL   34
usage_01028.pdb         1  AIERTLSIVKPD-----AVSKNHIGEIFARFEKAGLKIV   34
usage_01029.pdb         1  AIERTLSIVKPD-----AVSKNHIGEIFARFEKAGLKIV   34
usage_01030.pdb         1  AIERTLSIVKPD-----AVSKNHIGEIFARFEKAGLKIV   34
usage_01279.pdb         1  --ERTLSIIKPD-----AVAKNVIGEIESRFEKAGLKIV   32
                             ertlsivkpd           igei  rFEkaGlkiv


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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