################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:55:09 2021 # Report_file: c_0048_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00096.pdb # 2: usage_00097.pdb # 3: usage_00098.pdb # 4: usage_00099.pdb # 5: usage_00108.pdb # 6: usage_00109.pdb # 7: usage_00110.pdb # 8: usage_00124.pdb # 9: usage_00126.pdb # 10: usage_00127.pdb # 11: usage_00128.pdb # 12: usage_00129.pdb # 13: usage_00167.pdb # # Length: 257 # Identity: 96/257 ( 37.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 114/257 ( 44.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/257 ( 24.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00096.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00097.pdb 1 -KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 59 usage_00098.pdb 1 --TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 58 usage_00099.pdb 1 --TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 58 usage_00108.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00109.pdb 1 -KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 59 usage_00110.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00124.pdb 1 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 60 usage_00126.pdb 1 --NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPC 58 usage_00127.pdb 1 -KTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPC 59 usage_00128.pdb 1 -KTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPC 59 usage_00129.pdb 1 -KTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPC 59 usage_00167.pdb 1 -KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQI 59 t V MG AN RSIA G A L GAkL FTY ER L L e usage_00096.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00097.pdb 60 DVQSDEEVINGFEQIGKDVGNIDGVYHSIA------------ETSREGFLLAQDISSYSL 107 usage_00098.pdb 59 DVQSDEEVINGFEQIGKDVGNIDGVYHSI-------------ETSREGFLLAQDISSYSL 105 usage_00099.pdb 59 DVQSDEEVINGFEQIGKDVGNIDGVYHSI--------------TSREGFLLAQDISSYSL 104 usage_00108.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00109.pdb 60 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 119 usage_00110.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00124.pdb 61 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 120 usage_00126.pdb 59 DVTNDAEIETCFASIKEQVGVIHGIAHCIA--------GEYLNTNRDGFLLAHNISSYSL 110 usage_00127.pdb 60 DVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSL 119 usage_00128.pdb 60 DVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSL 119 usage_00129.pdb 60 DVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSL 119 usage_00167.pdb 60 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSL 119 DV DeE Fe I VG I Gv H I TsR GFLLAq IS SL usage_00096.pdb 121 TIVAHEAKKLMPEGGSIVATTYLGGEFA--VQNYNVMGVAKASLEANVKYLALDLGPDNI 178 usage_00097.pdb 108 TIVAHEAKKLMPEGGSIVATTY---------NY-NVMGVAKASLEANVKYLALDLGPDNI 157 usage_00098.pdb 106 TIVAHEAKKLMPEGGSIVATTY---------NY-NVMGVAKASLEANVKYLALDLGPDNI 155 usage_00099.pdb 105 TIVAHEAKKLMPEGGSIVATT-----------Y-NVMGVAKASLEANVKYLALDLGPDNI 152 usage_00108.pdb 121 TIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGPDNI 178 usage_00109.pdb 120 TIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGPDNI 177 usage_00110.pdb 121 TIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGPDNI 178 usage_00124.pdb 121 TIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGPDNI 178 usage_00126.pdb 111 TAVVKAARPMMTEGGSIVTLT-----------Y-NVMGVAKASLDASVKYLAADLGKENI 158 usage_00127.pdb 120 TAVAREAKKVMTEGGNILTLTYLG-GERVVK-NYNVMGVAKASLEASVKYLANDLGQHGI 177 usage_00128.pdb 120 TAVAREAKKVMTEGGNILTLTYLG-GERVVK-NYNVMGVAKASLEASVKYLANDLGQHGI 177 usage_00129.pdb 120 TAVAREAKKVMTEGGNILTLTYLG-GERVVK-NYNVMGVAKASLEASVKYLANDLGQHGI 177 usage_00167.pdb 120 TIVAHEAKKLMPEGGSIVATTYLG-GEFAVQ-NYNVMGVAKASLEANVKYLALDLGPDNI 177 T Va eAkk M EGG I T NVMGVAKASLeA VKYLA DLG I usage_00096.pdb 179 RVNAISAG-------PIRTL-----SAFNTILKEIEER---APLKRNVDQVEVGKTAAYL 223 usage_00097.pdb 158 RVNAISAGNTILKEI-----------------EER-APL-----KRNVDQVEVGKTAAYL 194 usage_00098.pdb 156 RVNAISAG-------PI---------------TILKEIEERAPLKRNVDQVEVGKTAAYL 193 usage_00099.pdb 153 RVNAIS-------------------------NTILKEIEERAPLKRNVDQVEVGKTAAYL 187 usage_00108.pdb 179 RVNAISAG-------PIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYL 228 usage_00109.pdb 178 RVNAISAG-------PIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYL 227 usage_00110.pdb 179 RVNAISAG-------PIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYL 228 usage_00124.pdb 179 RVNAISAG-------PIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYL 228 usage_00126.pdb 159 RVNSISAG-------PIR-------------S-ILKDIEERAPLRRTTTPEEVGDTAAFL 197 usage_00127.pdb 178 RVNAISAG-------PIRTLSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFL 227 usage_00128.pdb 178 RVNAISAG-------PIRTLSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFL 227 usage_00129.pdb 178 RVNAISAG-------PIRTLSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFL 227 usage_00167.pdb 178 RVNAISAG-------PIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYL 227 RVNaIS R q EVG TA L usage_00096.pdb 224 LSDLSSGVTGENIHVD- 239 usage_00097.pdb 195 LSDLSSGVTGENIHVDS 211 usage_00098.pdb 194 LSDLSSGVTGENIHVD- 209 usage_00099.pdb 188 LSDLSSGVTGENIHVD- 203 usage_00108.pdb 229 LSDLSSGVTGENIHVD- 244 usage_00109.pdb 228 LSDLSSGVTGENIHVD- 243 usage_00110.pdb 229 LSDLSSGVTGENIHVD- 244 usage_00124.pdb 229 LSDLSSGVTGENIHVD- 244 usage_00126.pdb 198 FSDMSRGITGENLHVD- 213 usage_00127.pdb 228 FSDLARGVTGENIHVD- 243 usage_00128.pdb 228 FSDLARGVTGENIHVD- 243 usage_00129.pdb 228 FSDLARGVTGENIHVD- 243 usage_00167.pdb 228 LSDLSSGVTGENIHVD- 243 SDl GvTGENiHVD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################