################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:36 2021 # Report_file: c_0408_6.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00008.pdb # 2: usage_00029.pdb # 3: usage_00036.pdb # 4: usage_00041.pdb # # Length: 99 # Identity: 14/ 99 ( 14.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 99 ( 42.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 99 ( 29.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -----WVVLLE--DGIEFYKK-KSDNSPKGMIPLKGSTLTSPC--------QDFG--KRM 42 usage_00029.pdb 1 -----KFILREDPAYLHYYDPA-GAEDPLGAIHLRGCVVTSV-ESNSNGR----KSE-EE 48 usage_00036.pdb 1 -----KFILREDPAYLHYYDPA-GAEDPLGAIHLRGCVVTSV-ESNSNGR----KSE-EE 48 usage_00041.pdb 1 NWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSAL-E--DNGVPTGVKGNVQG 57 f Lre a lhyYdp P G i LrG vts k usage_00008.pdb 43 FVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIEG 81 usage_00029.pdb 49 NLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT--- 84 usage_00036.pdb 49 NLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG-- 85 usage_00041.pdb 58 NLFKVITKDDTHYYIQASSKAERAEWIEAIKKLT----- 91 nlF iiT d hyf QAa ER eWi aI a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################