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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:03:21 2021
# Report_file: c_0372_2.html
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#====================================
# Aligned_structures: 9
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00006.pdb
#   4: usage_00010.pdb
#   5: usage_00012.pdb
#   6: usage_00025.pdb
#   7: usage_00026.pdb
#   8: usage_00027.pdb
#   9: usage_00028.pdb
#
# Length:        148
# Identity:       48/148 ( 32.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     52/148 ( 35.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/148 ( 15.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLL   60
usage_00005.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLL   60
usage_00006.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLL   60
usage_00010.pdb         1  FGDDLAWAATWLYTATNDSTYITDAEQFITL-------NKMQDKWTMCWDDMYVPAALRL   53
usage_00012.pdb         1  FYDELSWAAVWLYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLL   60
usage_00025.pdb         1  FGDDLAWAATWLYTATNDSTYITDAEQFITLGNT-MNENKMQDKWTMCWDDMYVPAALRL   59
usage_00026.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLL   60
usage_00027.pdb         1  FYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLL   60
usage_00028.pdb         1  FYDELSWAAVWLYLATNDSTYLTKAESYVQNWPKISGSNTIDYKWAHCWDDVHNGAALLL   60
                           F D L WAA WLY ATNDStY   AE                 KW  CWDD    a L L

usage_00004.pdb        61  AKLTNK-QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYA  119
usage_00005.pdb        61  AKLTNK-QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYA  119
usage_00006.pdb        61  AKLTNK-QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYA  119
usage_00010.pdb        54  AQITGK-QIYKDAIEFNFNYWK-T----QVTTTPGGLKWLSNWGVLRYAAAESMVMLVYC  107
usage_00012.pdb        61  ARIKNDNGKYKEAIERHLDWWTTGYNGERITYTPKGLAWLDQWGSLRYATTTAFLACVYS  120
usage_00025.pdb        60  AQITGK-QIYKDAIEFNFNYWK-T----QVTTTPGGLKWLSNWGVLRYAAAESMVMLVYC  113
usage_00026.pdb        61  AKLTNK-QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYA  119
usage_00027.pdb        61  AKLTNK-QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYA  119
usage_00028.pdb        61  AKITGK-DIYKQIIESHLDYWTTGYNGERIKYTPKGLAWLDQWGSLRYATTTAFLAFVYS  119
                           A  t k   YK  IE     W           TP GL WL  WG LR A        VY 

usage_00004.pdb       120  EWEGCTPSK--VSVYKDFLKSQIDYAL-  144
usage_00005.pdb       120  EWEGCTPSK--VSVYKDFLKSQIDYAL-  144
usage_00006.pdb       120  EWEGCTPSK--VSVYKDFLKSQIDYAL-  144
usage_00010.pdb       108  KQ-------NPDQSLLDLAKKQVDYILG  128
usage_00012.pdb       121  DWENGDKEK--AKTYLEFARSQADYAL-  145
usage_00025.pdb       114  KQ-------NPDQSLLDLAKKQVDYILG  134
usage_00026.pdb       120  EWEGCTPSK--VSVYKDFLKSQIDYAL-  144
usage_00027.pdb       120  EWEGCTPSK--VSVYKDFLKSQIDYAL-  144
usage_00028.pdb       120  DWVGCPSTK--KEIYRKFGESQIDYALG  145
                                                Q DY L 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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