################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:39:41 2021 # Report_file: c_1084_13.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00233.pdb # 2: usage_00235.pdb # 3: usage_00240.pdb # 4: usage_00241.pdb # 5: usage_00242.pdb # 6: usage_00243.pdb # 7: usage_00244.pdb # 8: usage_00245.pdb # 9: usage_00248.pdb # 10: usage_00249.pdb # 11: usage_01357.pdb # 12: usage_01358.pdb # 13: usage_01359.pdb # 14: usage_01360.pdb # 15: usage_01361.pdb # 16: usage_01362.pdb # 17: usage_01686.pdb # 18: usage_01700.pdb # 19: usage_01701.pdb # 20: usage_01937.pdb # 21: usage_01938.pdb # # Length: 74 # Identity: 23/ 74 ( 31.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 74 ( 62.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 74 ( 5.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00235.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00240.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00241.pdb 1 --NLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 58 usage_00242.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00243.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00244.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00245.pdb 1 --NLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 58 usage_00248.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_00249.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01357.pdb 1 DKTLAYLRGKAMGEEFNDKGVDILLGPAAGPLGKYPDGGRIWEGFSPDPVLTGVLFAETI 60 usage_01358.pdb 1 -KTLAYLRGKAMGEEFNDKGVDILLGPAAGPLGKYPDGGRIWEGFSPDPVLTGVLFAETI 59 usage_01359.pdb 1 DKTLAYLRGQAMGEEFSDKGIDVQLGPAAGPLGAHPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01360.pdb 1 DKTLAYLRGQAMGEEFSDKGIDVQLGPAAGPLGAHPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01361.pdb 1 DKTLAYLRGQAMGEEFSDKGIDVQLGPAAGPLGAHPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01362.pdb 1 --TLAYLRGQAMGEEFSDKGIDVQLGPAAGPLGAHPDGGRNWEGFSPDPALTGVLFAETI 58 usage_01686.pdb 1 -DTMADSYGKVMGRDGRALNQDMVLGPMMN-NIRVPHGGRNYETFSEDPLVSSRTAVAQI 58 usage_01700.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01701.pdb 1 DKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETI 60 usage_01937.pdb 1 -RNLAYRRGVAMGEEHRGKGVDVQLGPVAGPLGRSPDAGRNWEGFAPDPVLTGNMMASTI 59 usage_01938.pdb 1 --NLAYRRGVAMGEEHRGKGVDVQLGPVAGPLGRSPDAGRNWEGFAPDPVLTGNMMASTI 58 lAy rG aMG e kg D LGP ag lg Pd GR wEgF pDP ltg a tI usage_00233.pdb 61 KGIQDAGVVATAK- 73 usage_00235.pdb 61 KGIQDAGVVATAK- 73 usage_00240.pdb 61 KGIQDAGVVATAK- 73 usage_00241.pdb 59 KGIQDAGVVATAK- 71 usage_00242.pdb 61 KGIQDAGVVATAK- 73 usage_00243.pdb 61 KGIQDAGVVATAK- 73 usage_00244.pdb 61 KGIQDAGVVATAK- 73 usage_00245.pdb 59 KGIQDAGVVATAK- 71 usage_00248.pdb 61 KGIQDAGVVATAK- 73 usage_00249.pdb 61 KGIQDAGVVATAK- 73 usage_01357.pdb 61 KGIQDAGVIATAK- 73 usage_01358.pdb 60 KGIQDAGVIATAK- 72 usage_01359.pdb 61 KGIQDAGVIATAK- 73 usage_01360.pdb 61 KGIQDAGVIATAK- 73 usage_01361.pdb 61 KGIQDAGVIATAK- 73 usage_01362.pdb 59 KGIQDAGVIATAK- 71 usage_01686.pdb 59 KGIQGAGLMTTAKH 72 usage_01700.pdb 61 KGIQDAGVVATAK- 73 usage_01701.pdb 61 KGIQDAGVVATAK- 73 usage_01937.pdb 60 QGIQDAGVIACAK- 72 usage_01938.pdb 59 QGIQDAGVIACAK- 71 GIQdAGv a AK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################