################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:11 2021 # Report_file: c_0565_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00012.pdb # 4: usage_00090.pdb # 5: usage_00169.pdb # 6: usage_00170.pdb # # Length: 125 # Identity: 25/125 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 98/125 ( 78.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/125 ( 21.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -RVRTDLYRIPLPT---RLTDSTHGA-DFELITVRIEDSDGATGLGYTYTVNHGGAAVAT 55 usage_00011.pdb 1 ERVRTDLYRIPLPT---RLTDSTHGA-DFELITVRIEDSDGATGLGYTYTVNHGGAAVAT 56 usage_00012.pdb 1 ERVRTDLYRIPL---------------DFELITVRIEDSDGATGLGYTYTVNHGGAAVAT 45 usage_00090.pdb 1 -GLRTYDLRFPT-SEGLDGSDAMNPDPDYSAAYVILETEGTHEGHGLTFTIGRGNEICIA 58 usage_00169.pdb 1 ERVRTDLYRIPLPT---RLTDSTHGA-DFELITVRIEDSDGATGLGYTYTVNHGGAAVAT 56 usage_00170.pdb 1 ERVRTDLYRIPL---------------DFELITVRIEDSDGATGLGYTYTVNHGGAAVAT 45 rvRTdlyRiPl DfelitVriEdsdgatGlGyTyTvnhGgaavat usage_00010.pdb 56 VDKDLRGCLLGADAE--------QIEKIWQSWWRLHY-AGRGGHATSAISAVDIALWDLK 106 usage_00011.pdb 57 VDKDLRGCLLGADAE--------QIEKIWQSWWRLHY-AGRGGHATSAISAVDIALWDLK 107 usage_00012.pdb 46 VDKDLRGCLLGADAE--------QIEKIWQSWWRLHY-AGRGGHATSAISAVDIALWDLK 96 usage_00090.pdb 59 AIKALGALVVGLDLDWIREDMGRFWRHVTG-DSQLRWIGPDKGAIHLAAGAVVNAVWDLW 117 usage_00169.pdb 57 VDKDLRGCLLGADAE--------QIEKIWQSWWRLHY-AGRGGHATSAISAVDIALWDLK 107 usage_00170.pdb 46 VDKDLRGCLLGADAE--------QIEKIWQSWWRLHY-AGRGGHATSAISAVDIALWDLK 96 vdKdLrgcllGaDae qiekiwq wwrLhy agrgGhatsAisAVdiAlWDLk usage_00010.pdb 107 GIRA- 110 usage_00011.pdb 108 GIRA- 111 usage_00012.pdb 97 GIRAR 101 usage_00090.pdb 118 AKDT- 121 usage_00169.pdb 108 GIRA- 111 usage_00170.pdb 97 GIRAR 101 gira #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################