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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:48:30 2021
# Report_file: c_0426_6.html
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#====================================
# Aligned_structures: 8
#   1: usage_00008.pdb
#   2: usage_00046.pdb
#   3: usage_00047.pdb
#   4: usage_00067.pdb
#   5: usage_00073.pdb
#   6: usage_00098.pdb
#   7: usage_00099.pdb
#   8: usage_00100.pdb
#
# Length:         66
# Identity:       33/ 66 ( 50.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     37/ 66 ( 56.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           10/ 66 ( 15.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00008.pdb         1  --QLVESGGGLVQAGGSLRLSCAASESTFSNYAMGWFRQA--PEREFVATISQ-T-G---   51
usage_00046.pdb         1  -VQLQESGGGLVQAGGSLRLSCAASGRTSSAYAMGWFRQAPGKEREFVAGISS-K-G---   54
usage_00047.pdb         1  --QLQESGGGLVQAGGSLRLSCAASGRTSSAYAMGWFRQAPGKEREFVAGISS-K-G---   53
usage_00067.pdb         1  --QLVESGGGLVQAGDSLRLSCTASGRTFSRAVMGWFRQAPGKEREFVAAISAAP--GTA   56
usage_00073.pdb         1  --QLQESGGGLVQAGGSLRLSCTASGRTFSSYAMGWFRQTPGKEREFVAAITW-G-G---   53
usage_00098.pdb         1  --QLVESGGGLVQAGDSLRLSCTASGRTFSRAVMGWFRQAPGKEREFVAAISA-APG-TA   56
usage_00099.pdb         1  QVQLVESGGGLVQAGGSLRLSCAASRRSSRSWAMAWFRQAPGKEREFVAKISG-D-G---   55
usage_00100.pdb         1  QVQLVESGGGLVQAGGSLRLSCAASRRSSRSWAMAWFRQAPGKEREFVAKISG-D-G---   55
                             QL ESGGGLVQAG SLRLSC AS r      M WFRQa  kEREFVA Is        

usage_00008.pdb        52  SHTYYR   57
usage_00046.pdb        55  GSTYYG   60
usage_00047.pdb        54  GSTYYG   59
usage_00067.pdb        57  YYAFYA   62
usage_00073.pdb        54  STTLYA   59
usage_00098.pdb        57  YYAFYA   62
usage_00099.pdb        56  RLTTYG   61
usage_00100.pdb        56  RLTTYG   61
                               Y 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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