################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:19 2021 # Report_file: c_1401_74.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00605.pdb # 2: usage_00606.pdb # 3: usage_00616.pdb # # Length: 72 # Identity: 9/ 72 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/ 72 ( 83.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 72 ( 16.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00605.pdb 1 GLDRGLIAVGMGLAVGLAALG-TGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVI 59 usage_00606.pdb 1 -LDRGLIAVGMGLAVGLAALG-TGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVI 58 usage_00616.pdb 1 NWSVIVPALVIVLATVVWGIGFKDSFTNFASSALSAV--------VDNLGWAFI-LFGTV 51 ldrgliAvgmgLAvglaalG tgvaqarigaAgvga gtaLiflll etlvi usage_00605.pdb 60 FGLLIAFILNG- 70 usage_00606.pdb 59 FGLLIAFILNGR 70 usage_00616.pdb 52 FVFFIVVIAAS- 62 FgllIafIlng #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################