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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:41:07 2021
# Report_file: c_0516_13.html
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#====================================
# Aligned_structures: 7
#   1: usage_00056.pdb
#   2: usage_00057.pdb
#   3: usage_00058.pdb
#   4: usage_00059.pdb
#   5: usage_00060.pdb
#   6: usage_00178.pdb
#   7: usage_00235.pdb
#
# Length:         81
# Identity:        5/ 81 (  6.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     28/ 81 ( 34.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 81 ( 25.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00056.pdb         1  ----TSEAREFAT-RTG--V-S-GPVLELAAG-GRLTFPFLDL-G-WEVTALELSTSVLA   48
usage_00057.pdb         1  ---GTSEAREFAT-RT---V-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA   49
usage_00058.pdb         1  ---GTSEAREFAT-RTG-PV-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA   51
usage_00059.pdb         1  ---GTSEAREFAT-RTG--V-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA   50
usage_00060.pdb         1  ---GTSEAREFAT-RTG-PV-S-GPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLA   51
usage_00178.pdb         1  PEVAGQIATAAS--AVHP-KGEEPVFLELGVGTGRIALPLIAR-G-YRYIALDADAA-LE   54
usage_00235.pdb         1  ----DIGARFFQ-HLPE-NL-E-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP-AVA   51
                                  Ar f            g  leL  G Gr   p ld  g   v al  s   la

usage_00056.pdb        49  AFRKRLAEAPADVRDRCTLVQ   69
usage_00057.pdb        50  AFRKRLAEAPADVRDRCTLVQ   70
usage_00058.pdb        52  AFRKRLAEAPADVRDRCTLVQ   72
usage_00059.pdb        51  AFRKRLAEAPADVRDRCTLVQ   71
usage_00060.pdb        52  AFRKRLAEAPADVRDRCTLVQ   72
usage_00178.pdb        55  VFRQKIA---G-VDRKVQVVQ   71
usage_00235.pdb        52  SSRLNVETNPE-ALDRCEFI-   70
                            fR   a     v drc  v 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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