################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:36:05 2021 # Report_file: c_0415_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00025.pdb # 2: usage_00026.pdb # 3: usage_00035.pdb # 4: usage_00040.pdb # 5: usage_00046.pdb # 6: usage_00084.pdb # 7: usage_00099.pdb # 8: usage_00110.pdb # 9: usage_00156.pdb # 10: usage_00185.pdb # 11: usage_00187.pdb # # Length: 87 # Identity: 7/ 87 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 87 ( 8.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 87 ( 32.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00025.pdb 1 DITM-KHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTM----EVEEFLKEAAV 49 usage_00026.pdb 1 VFDV-LEKLGEGSYGSVFKAIHKE------SGQVVAIKQVPVES-----DLQEIIKEISI 48 usage_00035.pdb 1 NLLIADIELGCGNFGSVRQGVY-R------KQIDVAIKVLKQGTEKA--DTEEMMREAQI 51 usage_00040.pdb 1 VWEI-VGELGDGAFGKVYKAKNKE------TGALAAAKV-----------LEDYIVEIEI 42 usage_00046.pdb 1 LFTK-LDRIGKGSFGEVYKGIDNH------TKEVVAIKIIDLEEAE---EIEDIQQEITV 50 usage_00084.pdb 1 KITM-SRELGQGSFGMVYEGVAKGVVKDE-PETRVAIKTVNEAASMR--ERIEFLNEASV 56 usage_00099.pdb 1 -FKK-IKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREATS--PKANKEILDEAYV 54 usage_00110.pdb 1 LFTK-LEKIGKGSFGEVFKGIDNR------TQKVVAIKIIDLEEAED--EIEDIQQEITV 51 usage_00156.pdb 1 -ITL-IRGLG----GEVYEGQVS-------SPLQVAVKTLPEVCSEQ--DELDFLMEALI 45 usage_00185.pdb 1 DFEK-ISELGA---GVVFKVSHKP------SGLVMARKLIHLEIKPA--IRNQIIRELQV 48 usage_00187.pdb 1 LFTK-LEKIGKGSFGEVFKGIDNR------TQKVVAIKIIDLEE-D---EIEDIQQEITV 49 G G V A K E usage_00025.pdb 50 MKEIKHPNLVQLLGVCTREPPFYIITE 76 usage_00026.pdb 49 MQQCDSPYVVKYYGSYFKNTDLWIVME 75 usage_00035.pdb 52 MHQLDNPYIVRLIGVCQA-EALMLVME 77 usage_00040.pdb 43 LATCDHPYIVKLLGAYYHDGKLWIMIE 69 usage_00046.pdb 51 LSQCDSPYITRYFGSYLKSTKLWII-- 75 usage_00084.pdb 57 MKEFNCHHVVRLLGVVSQGQPTLVIME 83 usage_00099.pdb 55 MASVDNPHVCRLLGICLT-STVQLITQ 80 usage_00110.pdb 52 LSQCDSPYVTKYYGSYLKDTKLWIIME 78 usage_00156.pdb 46 ISKLNHQNIVRCIGVSLQSLPRFILLE 72 usage_00185.pdb 49 LHECNSPYIVGFYGAFYSDGEISICME 75 usage_00187.pdb 50 LSQCDSPYVTKYYGSYLKDTKLWIIME 76 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################