################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:59 2021 # Report_file: c_0705_28.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00005.pdb # 2: usage_00041.pdb # 3: usage_00256.pdb # 4: usage_00351.pdb # 5: usage_00352.pdb # 6: usage_00652.pdb # 7: usage_00744.pdb # # Length: 94 # Identity: 6/ 94 ( 6.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 94 ( 11.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 94 ( 36.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 GLYLIYSQVLFKGQGCPS--TH-VLLTHTISRIAVSY----QTKVNLLSAIKSP-CQRET 52 usage_00041.pdb 1 ---FIYGQVLYTDK--------TYAMGHLIQRKKVHVFGDELSLVTLFRCIQNM-P---- 44 usage_00256.pdb 1 GLYYLYCLVGYRGRA---PPQG-RSVTLRSSLYG--P----GTPELLLEGAETV-T---- 45 usage_00351.pdb 1 ---LIYSQVLFSGQGCPS--TH-VLLTHTISRIAVSY----QTPVNLLSAIRSP-CQ--- 46 usage_00352.pdb 1 ---LIYSQVLFSGQGCPS--TH-VLLTHTISRIAVSY----QTPVNLLSAIRSP-CQ--- 46 usage_00652.pdb 1 ---YIYAQVTFCS-----------PFIASLCLKSPGR-----FERILLRAANTHSS---- 37 usage_00744.pdb 1 ---LIYSQVLFKGQGCPS--TH-VLLTHTISRIAVSY----QTKVNLLSAIKSP-CQRET 49 iY qV Ll usage_00005.pdb 53 PEGAE-AKPWYEPIYLGGVFQLEKGDRLSAEINR 85 usage_00041.pdb 45 -----E-TLPNNSCYSAGIAKLEEGDELQLAIPR 72 usage_00256.pdb 46 -----P-PLWYTSVGFGGLVQLRRGERVYVNIS- 72 usage_00351.pdb 47 ------ANPWYEPIYLGGVFQLEPGDRLSAEINR 74 usage_00352.pdb 47 ------ANPWYEPIYLGGVFQLEPGDRLSAEINR 74 usage_00652.pdb 38 -----AKPCGQQSIHLGGVFELQPGASVFVNVT- 65 usage_00744.pdb 50 PEGAE-AKPWYEPIYLGGVFQLEKGDRLSAEINR 82 gG L G i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################