################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:01 2021 # Report_file: c_1409_44.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00041.pdb # 2: usage_00042.pdb # 3: usage_00043.pdb # 4: usage_00044.pdb # 5: usage_00895.pdb # # Length: 90 # Identity: 9/ 90 ( 10.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 90 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 90 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00041.pdb 1 TDVRNRIIKLVKGILEQNALAA--------DVTPQAKLVD-VG-LTSMDMVNLMLGVEAE 50 usage_00042.pdb 1 --HMNATIREILAKFGQ-----LPT--PVDTIADEADLYA-AG-LSSFASVQLMLGIEEA 49 usage_00043.pdb 1 --HMNATIREILAKFGQ-----LPT--PVDTIADEADLYA-AG-LSSFASVQLMLGIEEA 49 usage_00044.pdb 1 --HMNATIREILAKFGQ-----LPT--PVDTIADEADLYA-AG-LSSFASVQLMLGIEEA 49 usage_00895.pdb 1 ---HLEAVRNILGDVLN-----L--GERKHTLTASSVLLGNIPELDSMAVVNVITALEEY 50 n ir il q t a L g L S a V lmlg Ee usage_00041.pdb 51 FDFTIPQSEITPENFQSVETLERMVMTQ-- 78 usage_00042.pdb 50 FDIEFPDNLLNRKSFASIKAIEDTVKLIL- 78 usage_00043.pdb 50 FDIEFPDNLLNRKSFASIKAIEDTVKLI-- 77 usage_00044.pdb 50 FDIEFPDNLLNRKSFASIKAIEDTVKLI-- 77 usage_00895.pdb 51 FDFSVDDDEISAQTFETLGSLALFVEHKLS 80 FD pd F s e V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################