################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:28 2021 # Report_file: c_1492_242.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00214.pdb # 2: usage_00215.pdb # 3: usage_00619.pdb # 4: usage_01555.pdb # 5: usage_01789.pdb # 6: usage_01990.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 39 ( 15.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 39 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00214.pdb 1 PYSVAKKLL--TDVIRS-GGSSNLLQRTYDYLNSVE--- 33 usage_00215.pdb 1 PYSVAKKLL--TDVIRS-GGSSNLLQRTYDYLNSVE--- 33 usage_00619.pdb 1 -YSVAKKLL--TDVIRS-GGSSNLLQRTYDYLNSVE--- 32 usage_01555.pdb 1 PYSVAKKLL--SDVIKS-GSSSNLLQRTYDYLNSV---- 32 usage_01789.pdb 1 ----PFSQA--LEMIKTGEIRDGKTVLLLNYLQTSHLMD 33 usage_01990.pdb 1 --ATIQDVLRSDSQLK---NADVELQQRAVEYLRLST-- 32 l i lq yl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################