################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:56:39 2021 # Report_file: c_0189_3.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00062.pdb # 2: usage_00125.pdb # 3: usage_00147.pdb # 4: usage_00148.pdb # 5: usage_00172.pdb # 6: usage_00280.pdb # 7: usage_00426.pdb # 8: usage_00464.pdb # 9: usage_00511.pdb # 10: usage_00518.pdb # 11: usage_00714.pdb # 12: usage_00737.pdb # 13: usage_00743.pdb # # Length: 230 # Identity: 51/230 ( 22.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/230 ( 50.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 63/230 ( 27.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 57 usage_00125.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00147.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00148.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00172.pdb 1 MVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE 60 usage_00280.pdb 1 -------EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 52 usage_00426.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00464.pdb 1 -EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQR 58 usage_00511.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00518.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQR 59 usage_00714.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 usage_00737.pdb 1 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 57 usage_00743.pdb 1 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQR 59 EveIqshLrHPnILrlY YFhD rvYL LE ap G yreLqk FdEqr usage_00062.pdb 58 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF-GW-SVH---------- 105 usage_00125.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------------- 102 usage_00147.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WS---------- 105 usage_00148.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF-GW-SVHA--------- 108 usage_00172.pdb 61 ARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADF----------------- 103 usage_00280.pdb 53 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAG------------------ 94 usage_00426.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF-GW-SVHA------PCG 111 usage_00464.pdb 59 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADF-GW-SVHA--------- 107 usage_00511.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------------- 102 usage_00518.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADF-GWT---T-----L-CG 109 usage_00714.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF-GW-SVHA--------G 109 usage_00737.pdb 58 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRTL-CG 114 usage_00743.pdb 60 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF-GW-SVH---------G 108 at ela al YcHs viHRDikpeNLLlg gelKIA usage_00062.pdb 106 ----------TLDYLPPEMIEG------MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 149 usage_00125.pdb 103 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 147 usage_00147.pdb 106 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 150 usage_00148.pdb 109 P--------STLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 155 usage_00172.pdb 104 --------------GLATQLKMP-HES-------DVWSLGCMFYTLLIGRPPF---V-KN 137 usage_00280.pdb 95 ----------TLDYLPPEMIEG--------DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 136 usage_00426.pdb 112 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 156 usage_00464.pdb 108 PSLRRRMCG-TLDYLPPEMIEG-----KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 161 usage_00511.pdb 103 -----------LDYL-PPEMIEG----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 146 usage_00518.pdb 110 ----------TLDYL-PPEMIE-G---RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 154 usage_00714.pdb 110 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 154 usage_00737.pdb 115 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 159 usage_00743.pdb 109 ----------TLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 153 l p DlWslGvlcYefLvG PPF e usage_00062.pdb 150 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 193 usage_00125.pdb 148 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 191 usage_00147.pdb 151 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 194 usage_00148.pdb 156 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 199 usage_00172.pdb 138 TLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH------ 181 usage_00280.pdb 137 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 180 usage_00426.pdb 157 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 200 usage_00464.pdb 162 THRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH------ 205 usage_00511.pdb 147 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 190 usage_00518.pdb 155 TYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH------ 198 usage_00714.pdb 155 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 198 usage_00737.pdb 160 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 209 usage_00743.pdb 154 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH------ 197 T ri v fP F ga DLIs LL np qR L VleH #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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