################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:17 2021 # Report_file: c_0814_13.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00001.pdb # 2: usage_00048.pdb # 3: usage_00210.pdb # 4: usage_00285.pdb # 5: usage_00286.pdb # 6: usage_00287.pdb # 7: usage_00288.pdb # 8: usage_00289.pdb # 9: usage_00290.pdb # 10: usage_00291.pdb # 11: usage_00337.pdb # 12: usage_00361.pdb # 13: usage_00467.pdb # # Length: 80 # Identity: 20/ 80 ( 25.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 80 ( 52.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 80 ( 22.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -------RPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYFNYGVANRESGASVSEQTLFE 53 usage_00048.pdb 1 ------IRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQYFNYGVANKDSKQPITENTLFE 54 usage_00210.pdb 1 -------RPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYFNYGVANRESGASVSEQTLFE 53 usage_00285.pdb 1 --GEAPLTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 58 usage_00286.pdb 1 ---EAPLTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 57 usage_00287.pdb 1 ------LTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 54 usage_00288.pdb 1 ------LTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 54 usage_00289.pdb 1 -------TATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 53 usage_00290.pdb 1 -----PLTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 55 usage_00291.pdb 1 -----PLTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 55 usage_00337.pdb 1 -------RPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYFNYGVANRESGAGVSEQTLFE 53 usage_00361.pdb 1 DAGKSDLDAAVEATIPPLK-AKDIP-GAVAVLADGKAHYFNYGVASRETGQPVTQDTLFE 58 usage_00467.pdb 1 --------------IQPMLKAYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVSEQTLFE 46 i P Ip aVAVl dGKAhYFNYGVAnresg v e TLFE usage_00001.pdb 54 IGSVSKTLTATLGAYAVVKG 73 usage_00048.pdb 55 IGSVSKTFTATLAGYALANG 74 usage_00210.pdb 54 IGVSKTLTATLGAYAVV-KG 72 usage_00285.pdb 59 IGSVSKTLTATLGAYAAVK- 77 usage_00286.pdb 58 IGSVSKTLTATLGAYAAVKG 77 usage_00287.pdb 55 IGSVSKTLTATLGAYAAVKG 74 usage_00288.pdb 55 IGSVSKTLTATLGAYAAVK- 73 usage_00289.pdb 54 IGSVSKTLTATLGAYAAVKG 73 usage_00290.pdb 56 IGSVSKTLTATLGAYAAVK- 74 usage_00291.pdb 56 IGSVSKTLTATLGAYAAVKG 75 usage_00337.pdb 54 IGSVSKTLTATLGAYAVVKG 73 usage_00361.pdb 59 LGSISKTFTGILGGYALAQG 78 usage_00467.pdb 47 IGSVSKTLTATLGAYAAVKG 66 iGs skt t l ya #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################