################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:58 2021 # Report_file: c_1413_49.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00395.pdb # 2: usage_01083.pdb # 3: usage_01084.pdb # 4: usage_01286.pdb # 5: usage_01287.pdb # 6: usage_01297.pdb # 7: usage_01298.pdb # 8: usage_01299.pdb # 9: usage_01300.pdb # 10: usage_01360.pdb # 11: usage_01361.pdb # 12: usage_01371.pdb # # Length: 53 # Identity: 46/ 53 ( 86.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 53 ( 86.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 53 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00395.pdb 1 DPEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 50 usage_01083.pdb 1 -PEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 49 usage_01084.pdb 1 -PEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 49 usage_01286.pdb 1 --EKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 48 usage_01287.pdb 1 --EKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 48 usage_01297.pdb 1 ---KVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALEKVF 50 usage_01298.pdb 1 ---KVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 47 usage_01299.pdb 1 -PEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 49 usage_01300.pdb 1 --EKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALE--- 48 usage_01360.pdb 1 -PEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALEK-- 50 usage_01361.pdb 1 -PEKVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALEKVF 52 usage_01371.pdb 1 ---KVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDAL---- 46 KVKAALDKITWAAGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################