################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:36:01 2021 # Report_file: c_1393_18.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00141.pdb # 2: usage_00241.pdb # 3: usage_00302.pdb # 4: usage_00303.pdb # 5: usage_00304.pdb # 6: usage_00381.pdb # 7: usage_00384.pdb # 8: usage_00385.pdb # 9: usage_00430.pdb # 10: usage_00512.pdb # 11: usage_00513.pdb # 12: usage_00514.pdb # 13: usage_00515.pdb # 14: usage_00530.pdb # 15: usage_00536.pdb # 16: usage_00537.pdb # 17: usage_00762.pdb # 18: usage_00886.pdb # 19: usage_00887.pdb # 20: usage_00997.pdb # 21: usage_01001.pdb # 22: usage_01003.pdb # 23: usage_01014.pdb # 24: usage_01077.pdb # 25: usage_01080.pdb # 26: usage_01089.pdb # 27: usage_01091.pdb # 28: usage_01096.pdb # 29: usage_01224.pdb # 30: usage_01225.pdb # 31: usage_01226.pdb # 32: usage_01278.pdb # 33: usage_01279.pdb # 34: usage_01280.pdb # 35: usage_01281.pdb # 36: usage_01282.pdb # 37: usage_01286.pdb # 38: usage_01287.pdb # 39: usage_01288.pdb # 40: usage_01293.pdb # 41: usage_01294.pdb # 42: usage_01307.pdb # 43: usage_01308.pdb # 44: usage_01309.pdb # 45: usage_01310.pdb # 46: usage_01349.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 62 ( 9.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 62 ( 53.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00141.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_00241.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_00302.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_00303.pdb 1 ------LVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 53 usage_00304.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_00381.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_00384.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 53 usage_00385.pdb 1 ----GALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 55 usage_00430.pdb 1 GQIQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQ-SITIVSAMALSVLVALILTPALCA 58 usage_00512.pdb 1 D-KIGMFFQAMATFFGGFIIGFTRGW-KLTLVILAISPVLGLSAGIWAK----------- 47 usage_00513.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_00514.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_00515.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 53 usage_00530.pdb 1 -----ALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 54 usage_00536.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_00537.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_00762.pdb 1 ---GFTTTLY----TSLHGYFVFGPTGCNLEGF-FATLGGEIALWSLVVLAIERYVV--- 49 usage_00886.pdb 1 -----ALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 54 usage_00887.pdb 1 ---QGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 56 usage_00997.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01001.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01003.pdb 1 ----GALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 55 usage_01014.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01077.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01080.pdb 1 -----------------FVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 42 usage_01089.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01091.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01096.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01224.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 53 usage_01225.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01226.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01278.pdb 1 ---QGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 56 usage_01279.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01280.pdb 1 ---QGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 56 usage_01281.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01282.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01286.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 53 usage_01287.pdb 1 --IQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 57 usage_01288.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 53 usage_01293.pdb 1 ------LVGIAMVLSAVFVPMAFFGG-STGAIYRQ-SITIVSAMALSVLVALILTPALCA 52 usage_01294.pdb 1 GQIQGALVGIAMVLSAVFVPMAFFGG-STGAIYRQ-SITIVSAMALSVLVALILTPALCA 58 usage_01307.pdb 1 ------LVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 53 usage_01308.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_01309.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_01310.pdb 1 --IQGALVGIAMVLSAVFLPMAFFGG-STGVIYRQFSITIVSAMALSVIVALILTPALCA 57 usage_01349.pdb 1 -------------LSAVFVPMAFFGG-STGAIYRQFSITIVSAMALSVLVALILTPALCA 46 f f g s a v usage_00141.pdb 58 T- 58 usage_00241.pdb 58 T- 58 usage_00302.pdb 58 T- 58 usage_00303.pdb 54 T- 54 usage_00304.pdb 58 T- 58 usage_00381.pdb 58 T- 58 usage_00384.pdb 54 T- 54 usage_00385.pdb 56 T- 56 usage_00430.pdb 59 TM 60 usage_00512.pdb -- usage_00513.pdb 58 T- 58 usage_00514.pdb 58 T- 58 usage_00515.pdb 54 T- 54 usage_00530.pdb 55 T- 55 usage_00536.pdb 58 T- 58 usage_00537.pdb 58 T- 58 usage_00762.pdb -- usage_00886.pdb 55 T- 55 usage_00887.pdb 57 T- 57 usage_00997.pdb 58 T- 58 usage_01001.pdb 58 T- 58 usage_01003.pdb 56 T- 56 usage_01014.pdb 58 T- 58 usage_01077.pdb 58 T- 58 usage_01080.pdb 43 T- 43 usage_01089.pdb 58 T- 58 usage_01091.pdb 58 T- 58 usage_01096.pdb 58 T- 58 usage_01224.pdb 54 T- 54 usage_01225.pdb 58 TM 59 usage_01226.pdb 58 TM 59 usage_01278.pdb 57 T- 57 usage_01279.pdb 58 T- 58 usage_01280.pdb 57 T- 57 usage_01281.pdb 58 T- 58 usage_01282.pdb 58 T- 58 usage_01286.pdb 54 T- 54 usage_01287.pdb 58 T- 58 usage_01288.pdb 54 T- 54 usage_01293.pdb 53 T- 53 usage_01294.pdb 59 TM 60 usage_01307.pdb 54 T- 54 usage_01308.pdb 58 T- 58 usage_01309.pdb 58 T- 58 usage_01310.pdb 58 T- 58 usage_01349.pdb 47 T- 47 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################