################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:05 2021 # Report_file: c_1122_26.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00047.pdb # 2: usage_00072.pdb # 3: usage_00073.pdb # 4: usage_00111.pdb # 5: usage_00235.pdb # 6: usage_00276.pdb # 7: usage_00304.pdb # 8: usage_00348.pdb # # Length: 87 # Identity: 0/ 87 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 87 ( 21.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 87 ( 50.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 --TVEELREWILDHKTT-------------------------DADIKRVARGLTSEIIAA 33 usage_00072.pdb 1 ---ILKKVIQWCTH-HKDD-----------------DDI---PVWDQEFLK-VDQGTLFE 35 usage_00073.pdb 1 ---ILKKVIQWCTH-HKDD-----------------DDI---PVWDQEFLK-VDQGTLFE 35 usage_00111.pdb 1 -SSVLQKVIEWAEH-HRDSN-----------FPD-SAPV---DSWDREFLK-VDQEMLYE 42 usage_00235.pdb 1 NAAILKKVIQWCTH-HKDD------------------DI---PVWDQEFLK-VDQGTLFE 37 usage_00276.pdb 1 -AAILKKVIQWCTH-HKDDP-----------GGSGTDDI---PVWDQEFLK-VDQGTLFE 43 usage_00304.pdb 1 --SVLQKVIEWAEH-HRDSN-----------FP----PV---DSWDREFLK-VDQEMLYE 38 usage_00348.pdb 1 TSKILAKVIEYCKR-HVEA-AASKAEAVEGAATSDDD--LKAWDADFMKID-Q-ATL-FE 53 l kvi h h d e usage_00047.pdb 34 VTKLSNLD--LIYGAKKI--------- 49 usage_00072.pdb 36 LILA-ANYLDIKGLLDVTCKTVANMIK 61 usage_00073.pdb 36 LILA-ANYLDIKGLLDVTCKTVANMIK 61 usage_00111.pdb 43 IILA-ANYLNIKPLLDAGCKVVAEMIR 68 usage_00235.pdb 38 LILA-ANYLDIKGLLDVTCKTVANMIK 63 usage_00276.pdb 44 LILA-ANYLDIKGLLDVTCKTVANMIK 69 usage_00304.pdb 39 IILA-ANYLNIKPLLDAGCKVVAEMIR 64 usage_00348.pdb 54 LILA-ANYLNIKNLLDLTCQTVADMIK 79 ila any ik lld #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################