################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:04 2021 # Report_file: c_0579_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00122.pdb # 2: usage_00123.pdb # 3: usage_00124.pdb # 4: usage_00137.pdb # 5: usage_00138.pdb # 6: usage_00276.pdb # 7: usage_00278.pdb # 8: usage_00279.pdb # 9: usage_00300.pdb # # Length: 92 # Identity: 63/ 92 ( 68.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 87/ 92 ( 94.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 92 ( 4.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00122.pdb 1 PPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 60 usage_00123.pdb 1 --AVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 58 usage_00124.pdb 1 PPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 60 usage_00137.pdb 1 -PAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 59 usage_00138.pdb 1 PPAIAVQVSYPGASAETVQDTVVQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGTD 60 usage_00276.pdb 1 PPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 60 usage_00278.pdb 1 -PAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 59 usage_00279.pdb 1 PPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 60 usage_00300.pdb 1 PPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTD 60 AvtisaSYPGAdAkTVQDTVtQVIEQnMNGIDNLmYmSSnSdStGtvqITlTFEsGTD usage_00122.pdb 61 ADIAQVQVQAKLQLAMPLLPQEVQQQGVSVE- 91 usage_00123.pdb 59 ADIAQVQVQAKLQLAMPLLPQEVQQQGVSVE- 89 usage_00124.pdb 61 ADIAQVQVQAKLQLAMPLLPQEVQQQGVSV-- 90 usage_00137.pdb 60 ADIAQVQVQNKLQLAMPLLPQEVQQQGVSVE- 90 usage_00138.pdb 61 PDIAQVQVQNKLQLATPLLPQEVQRQGIRVTK 92 usage_00276.pdb 61 ADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEK 92 usage_00278.pdb 60 ADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEK 91 usage_00279.pdb 61 ADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEK 92 usage_00300.pdb 61 ADIAQVQVQAKLQLAMPLLPQEVQQQGVSV-- 90 aDIAQVQVQ KLQLAmPLLPQEVQqQGvsV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################