################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:02 2021 # Report_file: c_1380_221.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00399.pdb # 2: usage_00788.pdb # 3: usage_01097.pdb # 4: usage_01111.pdb # 5: usage_01186.pdb # 6: usage_01227.pdb # 7: usage_01645.pdb # 8: usage_02199.pdb # 9: usage_02259.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 43 ( 2.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 43 ( 27.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00399.pdb 1 SA---YMLWLNSARESIKRENPGI---KVTEVAKRGGELWRA- 36 usage_00788.pdb 1 SA---FFLFCSEYRPKIKGEHPGL---SIGDVAKKLGEMWNNT 37 usage_01097.pdb 1 -----FMLYMKEMRANVVAESTLK---ESAAINQILGRRWHAL 35 usage_01111.pdb 1 NA---FLLFCKRHRSLVRQEHPRL---DNRGATKILADWWAVL 37 usage_01186.pdb 1 NA---FMVWAKDERKRLAQQNPDL---HNAELSKMLGKSWKAL 37 usage_01227.pdb 1 EDEEELFLKICIKYGEKISRYPELLEGFANKLKDAVNED---- 39 usage_01645.pdb 1 SA---YALWLNSARESIKRENPGI---KVTEVAKRGGELWRAM 37 usage_02199.pdb 1 SA---FFLFCSEYRPKIKGEHPGL---SIGDVAKKLGEMWNNT 37 usage_02259.pdb 1 SS---YLRFSKEQLPIFKAQNPDA---KTTELIRRIAQRWREL 37 p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################