################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:06 2021 # Report_file: c_0596_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00033.pdb # 2: usage_00040.pdb # 3: usage_00061.pdb # 4: usage_00062.pdb # 5: usage_00063.pdb # 6: usage_00067.pdb # 7: usage_00068.pdb # 8: usage_00069.pdb # 9: usage_00100.pdb # # Length: 93 # Identity: 69/ 93 ( 74.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 93 ( 77.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 93 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVLTME-QK----N-GGNVL 52 usage_00040.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWC------N--V----QGGNVL 46 usage_00061.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-LTME-QK----N-GGNVL 51 usage_00062.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-LTME-QK----N-GGNVL 53 usage_00063.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWC------N--V----QSTNVL 46 usage_00067.pdb 1 --KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWC------N--VQSTN-GGNVL 49 usage_00068.pdb 1 RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN-LTMS-QK----N-GGNVL 53 usage_00069.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS------NQK----N-GGNVL 47 usage_00100.pdb 1 --KKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS---TME-QK----N-GGNVL 49 KKISIEGNIAAGKSTFVNILKQL EDWEVVPEPVARW ggNVL usage_00033.pdb 53 QMMYEKPERWSFTFQTYACLSRIRAQLASLNGK 85 usage_00040.pdb 47 QMMYEKPERWSFTFQTYACLSMIRAQLASLN-- 77 usage_00061.pdb 52 QMMYEKPERWSFTFQTYACLSRIRAQLASLN-- 82 usage_00062.pdb 54 QMMYEKPERWSFTFQTYACLSRIRAQLASLN-- 84 usage_00063.pdb 47 QMMYEKPERWSFTFQTYACLSRIRAQLASLNG- 78 usage_00067.pdb 50 QMMYEKPERWSFTFQTYACLSRIRAQLASLNG- 81 usage_00068.pdb 54 QMMYEKPERWSFTFQTYACLSRIRAQLASLNGK 86 usage_00069.pdb 48 QMMYEKPERWSFTFQTYACLSRIRAQLASLNG- 79 usage_00100.pdb 50 QMMYEKPERWSFTFQTYACLSRIRAQLASLN-- 80 QMMYEKPERWSFTFQTYACLSrIRAQLASLN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################