################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:11 2021 # Report_file: c_1431_60.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00277.pdb # 2: usage_00583.pdb # 3: usage_00702.pdb # 4: usage_01111.pdb # 5: usage_01112.pdb # # Length: 70 # Identity: 0/ 70 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 70 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 70 ( 58.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00277.pdb 1 ----PLLEALKIYIRKRRPSKPHMFPK--ILMKITDLRSISAKGAERVITLKMEIP-GSM 53 usage_00583.pdb 1 ---------------LNHPESSQLFAK--LLQKMTDLRQIVTEHVQLLQVI--------- 34 usage_00702.pdb 1 SNFQASLKSLT----------------SIKRNMPQKFNRFLLSQLIKEEAQTV---NH-- 39 usage_01111.pdb 1 ---QPYVEALLSYTRIKRPQDQLRFPR--MLMKLVSLRTLSSVHSEQVFALRLQDK-KL- 53 usage_01112.pdb 1 ---QPYVEALLSYTRIKRPQDQLRFPR--MLMKLVSLRTLSSVHSEQVFALRLQDK-KL- 53 l k lr usage_00277.pdb 54 PPL-IQEMME 62 usage_00583.pdb 35 HPL-LQEIYK 43 usage_00702.pdb 40 NITLNQCF-- 47 usage_01111.pdb 54 PPL-LSEIW- 61 usage_01112.pdb 54 PPL-LSEIW- 61 pl e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################