################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:02:04 2021 # Report_file: c_0768_51.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00136.pdb # 2: usage_00137.pdb # 3: usage_00138.pdb # 4: usage_00139.pdb # 5: usage_00215.pdb # 6: usage_00216.pdb # 7: usage_00220.pdb # 8: usage_00223.pdb # 9: usage_00445.pdb # 10: usage_00492.pdb # 11: usage_00493.pdb # 12: usage_00494.pdb # 13: usage_00497.pdb # # Length: 77 # Identity: 14/ 77 ( 18.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 77 ( 27.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 77 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00136.pdb 1 KDLIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 54 usage_00137.pdb 1 --LIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 52 usage_00138.pdb 1 --LIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 52 usage_00139.pdb 1 -DLIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 53 usage_00215.pdb 1 -DLIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 53 usage_00216.pdb 1 --LIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 52 usage_00220.pdb 1 -DLIVVAQTGTGKTLSYLMPGFIHLD---S--------NGPGMLVLTPTRELALHVEAEC 48 usage_00223.pdb 1 -DVIGISKTGSGKTISYLLPLLRQVKAQR---PLSKHETGPMGLILAPTRELALQIHEEV 56 usage_00445.pdb 1 -DLIGVAVTGSGKTAAFLLPLLVYIS---EEYNKN---DGPYALILAPTRELVQQIESEA 53 usage_00492.pdb 1 --LIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 52 usage_00493.pdb 1 -DLIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 53 usage_00494.pdb 1 -DLIGQARTGTGKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 53 usage_00497.pdb 1 --LIGQA----GKTLAFALPIAERLA--P---SQERG-RKPRALVLTPTRELALQVASEL 48 lIg a GKT lP P L L PTRELalq E usage_00136.pdb 55 TAVAP--H-L-KVVAVY 67 usage_00137.pdb 53 TAVAP--H-L-KVVAVY 65 usage_00138.pdb 53 TAVAP--H-L-KVVAVY 65 usage_00139.pdb 54 TAVAP--H-L-KVVAVY 66 usage_00215.pdb 54 TAVAP--H-L-KVVAVY 66 usage_00216.pdb 53 TAVAP--H-L-KVVAVY 65 usage_00220.pdb 49 SKYSY--KGL-KSICIY 62 usage_00223.pdb 57 TKFTE--A-DTSIRSVC 70 usage_00445.pdb 54 RKFADPLG-F-TVVSIV 68 usage_00492.pdb 53 TAVAP--H-L-KVVAVY 65 usage_00493.pdb 54 TAVAP--H-L-KVVAVY 66 usage_00494.pdb 54 TAVAP--H-L-KVVAVY 66 usage_00497.pdb 49 TAVAP--H-L-KVVAVY 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################