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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:10:38 2021
# Report_file: c_1080_17.html
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#====================================
# Aligned_structures: 9
#   1: usage_00112.pdb
#   2: usage_00168.pdb
#   3: usage_00169.pdb
#   4: usage_00216.pdb
#   5: usage_00224.pdb
#   6: usage_00228.pdb
#   7: usage_00229.pdb
#   8: usage_00434.pdb
#   9: usage_00460.pdb
#
# Length:         66
# Identity:        0/ 66 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      3/ 66 (  4.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           31/ 66 ( 47.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00112.pdb         1  ------TDAQLFSKFT-GNVVYVVNSENNN---KDEVKKGKELIEATGA------K-LLG   43
usage_00168.pdb         1  TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI   47
usage_00169.pdb         1  TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI   47
usage_00216.pdb         1  TPAELRVHFDKLG--W-S-RVVAFQTR---NPMHRAHRELTVRAARSRQ------ANVLI   47
usage_00224.pdb         1  TPEEVRAFFRQRG--W-R-KVVAFQTR---NAPHRAHEYLIRLGLELAD------G-VLV   46
usage_00228.pdb         1  TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI   47
usage_00229.pdb         1  TPAQLRLEFQSRQ--W-D-RVVAFQTR---NPMHRAHRELTVRAAREAN------AKVLI   47
usage_00434.pdb         1  ----LDELVKEKE--VDQ-VIVVTVD----------NPFANQAWAKSLGVKDTTHIKFAS   43
usage_00460.pdb         1  TPKQVREEIKSLG--L-D-KIVAFQTR---NPMHRVHEELTKRAMEKVG------GGLLL   47
                                                v                                    l 

usage_00112.pdb        44  VVLNR-   48
usage_00168.pdb        48  HP----   49
usage_00169.pdb        48  HP----   49
usage_00216.pdb        48  HPV-VG   52
usage_00224.pdb        47  HPI-LG   51
usage_00228.pdb        48  HP----   49
usage_00229.pdb        48  HP----   49
usage_00434.pdb        44  DP----   45
usage_00460.pdb        48  HP----   49
                            p    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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