################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:28 2021 # Report_file: c_1452_183.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00139.pdb # 2: usage_00889.pdb # 3: usage_01013.pdb # 4: usage_01306.pdb # 5: usage_01307.pdb # 6: usage_01631.pdb # 7: usage_02873.pdb # 8: usage_03128.pdb # 9: usage_03129.pdb # 10: usage_03130.pdb # 11: usage_03312.pdb # 12: usage_04601.pdb # 13: usage_04797.pdb # # Length: 22 # Identity: 0/ 22 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 22 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 22 ( 68.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 -DYFIFVG-------KKVYYRD 14 usage_00889.pdb 1 PTYQFVGDD------LVVVG-- 14 usage_01013.pdb 1 PTYQFVGDD------LVVVG-- 14 usage_01306.pdb 1 CPMVTDDF--------VVSG-- 12 usage_01307.pdb 1 CPMVTDDF--------VVSG-- 12 usage_01631.pdb 1 RYKYVLDD-------ASEIP-- 13 usage_02873.pdb 1 -YSIQGKY-------DEIIVAN 14 usage_03128.pdb 1 PTYQFVGDD------LVVVG-- 14 usage_03129.pdb 1 PTYQFVGDD------LVVVG-- 14 usage_03130.pdb 1 PTYQFVGDD------LVVVG-- 14 usage_03312.pdb 1 EYNFVLSD-------GMVVP-- 13 usage_04601.pdb 1 -VCYIQQGNNIGRVG------- 14 usage_04797.pdb 1 KFNDFVDDR------TVAPV-- 14 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################