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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:42:37 2021
# Report_file: c_0078_3.html
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#====================================
# Aligned_structures: 12
#   1: usage_00001.pdb
#   2: usage_00005.pdb
#   3: usage_00006.pdb
#   4: usage_00007.pdb
#   5: usage_00031.pdb
#   6: usage_00036.pdb
#   7: usage_00071.pdb
#   8: usage_00072.pdb
#   9: usage_00073.pdb
#  10: usage_00074.pdb
#  11: usage_00081.pdb
#  12: usage_00083.pdb
#
# Length:        187
# Identity:       63/187 ( 33.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    151/187 ( 80.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/187 ( 13.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  TFLHIPMTKARLT---NPKFQIAAQNAI-TRSG-AFTGEVSLQILKDYGISWVVLGHSER   55
usage_00005.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00006.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00007.pdb         1  ----LRSVQTLVDGDK-LRLTYGAQDLSPHD-SGAYTGDVSGAFLAKLGCSYVVVGHSER   54
usage_00031.pdb         1  ----IPMTKARLT---NPKFQIAAQNAG-NA-D-------ALASLKDYGISWVVLGHSER   44
usage_00036.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00071.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00072.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00073.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00074.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00081.pdb         1  ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   51
usage_00083.pdb         1  TFLHIPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER   55
                               ipmtkarlt    pkfqiaAQna             sl  LkdyGiSwVVlGHSER

usage_00001.pdb        56  RLYYGETNEIVAEKVAQA-AAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  114
usage_00005.pdb        52  RLYYGDTNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00006.pdb        52  RLYYGDTNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00007.pdb        55  RTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQ  114
usage_00031.pdb        45  RLYYGETNEIVAEKVAQA-AAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  103
usage_00036.pdb        52  RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00071.pdb        52  RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00072.pdb        52  RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00073.pdb        52  RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00074.pdb        52  RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00081.pdb        52  RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  111
usage_00083.pdb        56  RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA  115
                           R Yyg tneiVA KvA A a GfhvIVCvGEtneeREAGrtaAvvltQLaavaqkLskEa

usage_00001.pdb       115  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  174
usage_00005.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00006.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00007.pdb       115  IGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKN  174
usage_00031.pdb       104  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  163
usage_00036.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00071.pdb       112  WSRVVIAYEPVWA------ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  165
usage_00072.pdb       112  WSRVVIAYEPVWA------ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  165
usage_00073.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00074.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00081.pdb       112  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  171
usage_00083.pdb       116  WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN  175
                           wsrVVIAYEPVWA      AtpqqAQEVhellRrwvrSklgtdIAaqlRiLYGGSVtAKN

usage_00001.pdb       175  ARTLYQ-  180
usage_00005.pdb       172  ARTLYQ-  177
usage_00006.pdb       172  ARTLYQ-  177
usage_00007.pdb       175  VGDIVAQ  181
usage_00031.pdb       164  ARTLYQ-  169
usage_00036.pdb       172  ARTLYQ-  177
usage_00071.pdb       166  ARTLYQ-  171
usage_00072.pdb       166  ARTLYQ-  171
usage_00073.pdb       172  ARTLYQ-  177
usage_00074.pdb       172  ARTLYQ-  177
usage_00081.pdb       172  ARTLYQ-  177
usage_00083.pdb       176  ARTLYQ-  181
                           artlyq 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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