################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:19:07 2021 # Report_file: c_0001_4.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00008.pdb # 2: usage_00009.pdb # 3: usage_00015.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00020.pdb # 7: usage_00021.pdb # 8: usage_00022.pdb # 9: usage_00023.pdb # 10: usage_00100.pdb # 11: usage_00101.pdb # 12: usage_00102.pdb # 13: usage_00103.pdb # 14: usage_00104.pdb # 15: usage_00105.pdb # 16: usage_00106.pdb # 17: usage_00107.pdb # 18: usage_00108.pdb # 19: usage_00109.pdb # 20: usage_00110.pdb # # Length: 235 # Identity: 34/235 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 146/235 ( 62.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 88/235 ( 37.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00009.pdb 1 AVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 60 usage_00015.pdb 1 ------------------------AIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKG 36 usage_00018.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00019.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00020.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00021.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00022.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00023.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00100.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00101.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00102.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00103.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00104.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00105.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00106.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00107.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00108.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 usage_00109.pdb 1 ------AKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 54 usage_00110.pdb 1 ------------VSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHE 48 velgdnVIIGagcfvgkNskIgaGsrlwaNVtIyhe usage_00008.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00009.pdb 61 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 116 usage_00015.pdb 37 SFIGARSILG------EYLVDFYND---------RINKKHPLIIGENALIRTENVIYGD- 80 usage_00018.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00019.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00020.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00021.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00022.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00023.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00100.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00101.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00102.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00103.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00104.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00105.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00106.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00107.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00108.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 usage_00109.pdb 55 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 110 usage_00110.pdb 49 IQIGQNCLIQSGTVVGADGFG----YANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGA 104 iqIGqncliq adgfg kIpqigrvIIGdrveIgacttIdrg usage_00008.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00009.pdb 117 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 176 usage_00015.pdb 81 ---TIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSII 137 usage_00018.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00019.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00020.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00021.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00022.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00023.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00100.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00101.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00102.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00103.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00104.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00105.pdb 105 LDDTIIGNGVIIDNQCQIAANVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00106.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00107.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00108.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 usage_00109.pdb 111 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 170 usage_00110.pdb 105 LDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEI 164 TIIGngviidnqcqIa NvvIGdNtavaggvimagslkIGrYcmIggasvinghmeI usage_00008.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00009.pdb 177 CDKVTVTGMGMVMR----------------------------------------- 190 usage_00015.pdb 138 KDFVWLFPHVVLTNDPTPPSNELLGVTIELFAVIAARSVVLPGIHINEDALVG-- 190 usage_00018.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00019.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00020.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00021.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00022.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00023.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00100.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00101.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00102.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00103.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00104.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00105.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00106.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00107.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00108.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 usage_00109.pdb 171 CDKVTVTGMGMVMR------------------PITE------------------- 188 usage_00110.pdb 165 CDKVTVTGMGMVMR------------------PITEPGVYS------------SG 189 cDkVtvtgmgmvmr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################