################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:59:42 2021 # Report_file: c_1120_102.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00413.pdb # 2: usage_01012.pdb # 3: usage_01013.pdb # # Length: 103 # Identity: 41/103 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/103 ( 58.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/103 ( 41.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00413.pdb 1 ----------------GQQALLQHWSEYIKTFGTAIVINPEKDK-DMVQDLLDFKDKVDH 43 usage_01012.pdb 1 IQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD-KTMRQELDDFKDKVDH 59 usage_01013.pdb 1 IQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINP----KTMRQELDDFKDKVDH 56 GvQvLLQqWiEYIKaFGstIVINP tMrQeLdDFKDKVDH usage_00413.pdb 44 VIEVCFQKNERFVNLMKESFETFINKRPNKPAELIAKHVDSKL 86 usage_01012.pdb 60 IIDICFLKNEKFINAMKEAFETF-------------------- 82 usage_01013.pdb 57 IIDICFLKNEKFINAMKEAFE---------------------- 77 iIdiCFlKNEkFiNaMKEaFE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################