################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:41:26 2021 # Report_file: c_1198_65.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00286.pdb # 2: usage_00443.pdb # 3: usage_01446.pdb # 4: usage_01447.pdb # 5: usage_01448.pdb # 6: usage_01449.pdb # 7: usage_01456.pdb # 8: usage_01457.pdb # 9: usage_02072.pdb # 10: usage_02127.pdb # 11: usage_02128.pdb # 12: usage_02129.pdb # 13: usage_02130.pdb # 14: usage_02205.pdb # 15: usage_02348.pdb # 16: usage_02349.pdb # # Length: 36 # Identity: 12/ 36 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 36 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 36 ( 30.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00286.pdb 1 -ASAPTLFPLVSC-E-N-SNPSSTVAVGCLAQDFLP 32 usage_00443.pdb 1 -PKAPSVFPLAPC-CGDT--PSATVTLGCLVKGYLP 32 usage_01446.pdb 1 -PKGPSVFPLAPC---------STVTLGCLVKGYLP 26 usage_01447.pdb 1 -PKGPSVFPLAPC----------TVTLGCLVKGYLP 25 usage_01448.pdb 1 -PKGPSVFPLAPC-------PSSTVTLGCLVKGYLP 28 usage_01449.pdb 1 -PKGPSVFPLAPC-C-G---PSSTVTLGCLVKGYLP 30 usage_01456.pdb 1 -PKGPSVFPLAPC-C------SSTVTLGCLVKGYLP 28 usage_01457.pdb 1 -PKGPSVFPLAPC--------SSTVTLGCLVKGYLP 27 usage_02072.pdb 1 -PKAPSVFPLAPC-CGDT----PTVTLGCLVKGYLP 30 usage_02127.pdb 1 -PKAPSVFPLAPC-CGDT--PSSTVTLGCLVKGYLP 32 usage_02128.pdb 1 -PKAPSVFPLAPC-CGDT--PSSTVTLGCLVKGYLP 32 usage_02129.pdb 1 QPKAPSVFPLAPC---------STVTLGCLVKGYLP 27 usage_02130.pdb 1 -PKAPSVFPLAPC---------STVTLGCLVKGYLP 26 usage_02205.pdb 1 -PKAPSVFPLAPC-CGDT--PSSTVTLGCLVKGYLP 32 usage_02348.pdb 1 -PKGPSVFPLAPCT------PSSTVTLGCLVKGYLP 29 usage_02349.pdb 1 -PKGPSVFPLAPC--------SSTVTLGCLVKGYLP 27 pk PsvFPLapC TVtlGCLvkgyLP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################