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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:07:40 2021
# Report_file: c_0405_21.html
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#====================================
# Aligned_structures: 9
#   1: usage_00079.pdb
#   2: usage_00469.pdb
#   3: usage_00470.pdb
#   4: usage_00478.pdb
#   5: usage_00483.pdb
#   6: usage_00541.pdb
#   7: usage_00565.pdb
#   8: usage_00568.pdb
#   9: usage_00569.pdb
#
# Length:         77
# Identity:       60/ 77 ( 77.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/ 77 ( 92.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/ 77 (  7.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00079.pdb         1  ---LNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   57
usage_00469.pdb         1  PNYLNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   60
usage_00470.pdb         1  PNYLNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   60
usage_00478.pdb         1  ---LNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   57
usage_00483.pdb         1  ---LNCYVSGFHPPQIEIDLLKNGEKMNAEQSDLSFSKDWSFYLLVHTEFTPNAVDQYSC   57
usage_00541.pdb         1  PNYLNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   60
usage_00565.pdb         1  ---LNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   57
usage_00568.pdb         1  ---LNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   57
usage_00569.pdb         1  ---LNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSC   57
                              LNCYVyGFHPPQIEIDLLKNGEKiksEQSDLSFSKDWSFYLLsHaEFTPNskDQYSC

usage_00079.pdb        58  RVKHVTLEQPRIVKWDR   74
usage_00469.pdb        61  RVKHVTLEQPRIVK---   74
usage_00470.pdb        61  RVKHVTLEQPRIVK---   74
usage_00478.pdb        58  RVKHVTLEQPRIVK---   71
usage_00483.pdb        58  RVKHVTLDKPKIVK---   71
usage_00541.pdb        61  RVKHVTLEQPRIVK---   74
usage_00565.pdb        58  RVKHVTLEQPRIVK---   71
usage_00568.pdb        58  RVKHVTLEQPRIVK---   71
usage_00569.pdb        58  RVKHVTLEQPRIVK---   71
                           RVKHVTLeqPrIVK   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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