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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:25:56 2021
# Report_file: c_0141_29.html
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#====================================
# Aligned_structures: 6
#   1: usage_00122.pdb
#   2: usage_00126.pdb
#   3: usage_00129.pdb
#   4: usage_00133.pdb
#   5: usage_00242.pdb
#   6: usage_00243.pdb
#
# Length:        181
# Identity:       60/181 ( 33.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     73/181 ( 40.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/181 ( 13.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00122.pdb         1  RTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQML   60
usage_00126.pdb         1  RTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQML   60
usage_00129.pdb         1  RTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQML   60
usage_00133.pdb         1  --------ASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQML   52
usage_00242.pdb         1  --------AQQLDQ-IG-YWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQML   50
usage_00243.pdb         1  --------AQQLDQ-IG-YWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQML   50
                                   A           SLEcWGGATFD   rFL EdPW RL l     PN  lQML

usage_00122.pdb        61  LRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEA  120
usage_00126.pdb        61  LRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEA  120
usage_00129.pdb        61  LRGANGVGATNYPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEA  120
usage_00133.pdb        53  LRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEG  112
usage_00242.pdb        51  LRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQG  110
usage_00243.pdb        51  LRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQG  110
                           LRg N  Gy  Y D Vv  FV  a K G D FRvFD  N V nM     A          

usage_00122.pdb       121  AICYTGDILNSA-RPKYDLKYYTNLAVELEKAGAHIIAV-DMAGLLKPAAAKVLFKALRE  178
usage_00126.pdb       121  AICYTGDILNSA-RPKYDLKYYTNLAVELEKAGAHIIAV-DMAGLLKPAAAKVL------  172
usage_00129.pdb       121  AICYTGDILNSA-RPKYDLKYYTNLAVELEKAGAHIIAV-DMAGLLKPAAAKVL------  172
usage_00133.pdb       113  TICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKS  172
usage_00242.pdb       111  TLCYTT-------SPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKK  163
usage_00243.pdb       111  TLCYTT-------SPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKK  163
                             CYT         p   L      A  L   G   iA  DMAG L P AA  L      

usage_00122.pdb       179  A  179
usage_00126.pdb            -     
usage_00129.pdb            -     
usage_00133.pdb       173  A  173
usage_00242.pdb       164  Q  164
usage_00243.pdb       164  Q  164
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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