################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:51:36 2021 # Report_file: c_1424_55.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00111.pdb # 4: usage_00112.pdb # 5: usage_00169.pdb # 6: usage_00170.pdb # 7: usage_00171.pdb # 8: usage_00267.pdb # 9: usage_00268.pdb # 10: usage_00270.pdb # 11: usage_00271.pdb # 12: usage_00272.pdb # 13: usage_00273.pdb # 14: usage_00274.pdb # 15: usage_00277.pdb # 16: usage_00278.pdb # 17: usage_00279.pdb # 18: usage_00419.pdb # 19: usage_00689.pdb # 20: usage_00690.pdb # 21: usage_00778.pdb # 22: usage_00779.pdb # 23: usage_00780.pdb # 24: usage_00846.pdb # 25: usage_00847.pdb # 26: usage_00848.pdb # 27: usage_00849.pdb # 28: usage_00875.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 17/ 44 ( 38.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 44 ( 45.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 39 usage_00003.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 39 usage_00111.pdb 1 -VKEVQDEVDGYFLENWKFPSFKAVRTFLD--AKFSEVTCLY-- 39 usage_00112.pdb 1 -VKEVQDEVDGYFLENWKFPSFKAVRTFLD--AKFSEVTCLY-- 39 usage_00169.pdb 1 LVEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 40 usage_00170.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 39 usage_00171.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 39 usage_00267.pdb 1 --EEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 39 usage_00268.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00270.pdb 1 --EEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 39 usage_00271.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00272.pdb 1 --------VDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 33 usage_00273.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00274.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00277.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00278.pdb 1 --EEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 39 usage_00279.pdb 1 --EEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 39 usage_00419.pdb 1 -----NDLITYLQKNAD-AA---FLRHWK-LTG-TNKSIRKN-- 31 usage_00689.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00690.pdb 1 --------VDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 33 usage_00778.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00779.pdb 1 --EEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 39 usage_00780.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 usage_00846.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYFP 41 usage_00847.pdb 1 LVEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYFP 42 usage_00848.pdb 1 LVEEVSKEVDGYFLQHWN--NEKARKKFVA--AGFSRVTCLYF- 39 usage_00849.pdb 1 LVEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLY-- 40 usage_00875.pdb 1 -VEEVSKEVDGYFLQHWNFPNEKARKKFVA--AGFSRVTCLYF- 40 vdgyfl w a f a fs vtcly #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################