################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:45 2021 # Report_file: c_1166_107.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00086.pdb # 2: usage_00087.pdb # 3: usage_00469.pdb # 4: usage_00587.pdb # 5: usage_01076.pdb # # Length: 61 # Identity: 0/ 61 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 61 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 47/ 61 ( 77.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 --GAWLMVS---IS-----SPVLSLSSLLR--------------PQPEPQQEP-VLITMA 35 usage_00087.pdb 1 --GAWLMVS---IS-----SPVLSLSSLLR--------------PQPEPQQEP-VLITMA 35 usage_00469.pdb 1 ----GQFMD---LTIPGTD---VSRSYSPANLP-----NPE-GRLEF---L--------- 32 usage_00587.pdb 1 -G--MIKVRGE--------------LWKARSKFNGKIEKGE-KVRVV---DMDG------ 33 usage_01076.pdb 1 GS--FIIQPC-NTF-------DYYASQLFLSSNA----TTNRLGILS---IGS------- 36 s usage_00086.pdb 36 T 36 usage_00087.pdb 36 T 36 usage_00469.pdb - usage_00587.pdb - usage_01076.pdb - #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################