################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:51 2021 # Report_file: c_0876_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00153.pdb # 2: usage_00154.pdb # 3: usage_00222.pdb # 4: usage_00223.pdb # 5: usage_00259.pdb # 6: usage_00351.pdb # # Length: 113 # Identity: 41/113 ( 36.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 91/113 ( 80.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/113 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00153.pdb 1 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-- 58 usage_00154.pdb 1 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-- 58 usage_00222.pdb 1 --SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-- 56 usage_00223.pdb 1 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-- 58 usage_00259.pdb 1 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-- 58 usage_00351.pdb 1 NQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGA-------------EI 46 siDmWSaGCIfAELana RpLFPGnDvdDQLKrIfRLlGTPte usage_00153.pdb 59 -PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 110 usage_00154.pdb 59 -PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS-- 108 usage_00222.pdb 57 -PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 108 usage_00223.pdb 59 -PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 110 usage_00259.pdb 59 -PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 110 usage_00351.pdb 47 QSLAQMPKM-NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA-- 96 pypmyPat slvNVvpklNatgrDLLqnlLkcnpvqRIsAeeALqHpYFs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################