################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:38:31 2021 # Report_file: c_0721_55.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00057.pdb # 2: usage_00117.pdb # 3: usage_00118.pdb # 4: usage_00152.pdb # 5: usage_00153.pdb # 6: usage_00229.pdb # 7: usage_00230.pdb # 8: usage_00231.pdb # 9: usage_00270.pdb # 10: usage_00302.pdb # 11: usage_00415.pdb # 12: usage_00612.pdb # 13: usage_00631.pdb # 14: usage_00635.pdb # 15: usage_00677.pdb # 16: usage_00678.pdb # 17: usage_00679.pdb # 18: usage_00749.pdb # 19: usage_00775.pdb # 20: usage_00832.pdb # 21: usage_00836.pdb # # Length: 68 # Identity: 6/ 68 ( 8.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 68 ( 35.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 68 ( 25.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLVCQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 usage_00117.pdb 1 ----LDTDYKKYLLFCMENS----QSLVCQCLVRTPEVDDEALEKFDKALKALPM-H--- 48 usage_00118.pdb 1 ----LDTDYKKYLLFCMENS----QSLVCQCLVRTPEVDDEALEKFDKALKALPM-H--- 48 usage_00152.pdb 1 ----LDTDYKKYLLFCMENSA---QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 49 usage_00153.pdb 1 ----LDTDYKKYLLFCMEN-----QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 47 usage_00229.pdb 1 ----LDTDYKKYLLFCMEN------SLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 46 usage_00230.pdb 1 ----LDTDYKKYLLFCMEN----EQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 48 usage_00231.pdb 1 ----LDTDYKKYLLFCMEN-----QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 47 usage_00270.pdb 1 ----LDTDYKKYLLFCMEN-----QSLVCQCLVRTPEVDDEALEKFDKALKALPM-H--- 47 usage_00302.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 usage_00415.pdb 1 ----VSTNYNQHAMVFFKEVAQNRETFNITLYGRTKELTSELKENFIRFSKSLGL-PENH 55 usage_00612.pdb 1 EATLLDTDYDNFLFLCLQDTTTPIQSMMCQYLARVLVEDDEIMQGFIRAFRPLPRHL--- 57 usage_00631.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 usage_00635.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 usage_00677.pdb 1 ----LDTDYKKYLLFCMENSA---QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 49 usage_00678.pdb 1 ----LDTDYKKYLLFCMENSA--EQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 50 usage_00679.pdb 1 ----LDTDYKKYLLFCMENS----QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 48 usage_00749.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 usage_00775.pdb 1 ----LDTDYKKYLLFCMEN-----QSLACQCLVRTPEVDKEALEKFDKALKALPM-H--- 47 usage_00832.pdb 1 ----LDTDYKKYLLFCMENS----QSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 48 usage_00836.pdb 1 ----LDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPM-H--- 52 ldTdY l c s cq l Rt e d E e F a k Lp usage_00057.pdb 53 IRLSF--- 57 usage_00117.pdb 49 IRLSF--- 53 usage_00118.pdb 49 IRLSF--- 53 usage_00152.pdb 50 IRLSF--- 54 usage_00153.pdb 48 IRLSF--- 52 usage_00229.pdb 47 IRLSF--- 51 usage_00230.pdb 49 IRLSF--- 53 usage_00231.pdb 48 IRLSF--- 52 usage_00270.pdb 48 IRLSF--- 52 usage_00302.pdb 53 IRLSF--- 57 usage_00415.pdb 56 IVFPV--P 61 usage_00612.pdb 58 WYLLDLKQ 65 usage_00631.pdb 53 IRLSF--- 57 usage_00635.pdb 53 IRLSF--- 57 usage_00677.pdb 50 IRLSF--- 54 usage_00678.pdb 51 IRLSF--- 55 usage_00679.pdb 49 IRLSF--- 53 usage_00749.pdb 53 IRLSF--- 57 usage_00775.pdb 48 IRLAF--- 52 usage_00832.pdb 49 IRLSF--- 53 usage_00836.pdb 53 IRLSF--- 57 i l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################