################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:35 2021 # Report_file: c_0462_6.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00232.pdb # 2: usage_00233.pdb # 3: usage_00234.pdb # 4: usage_00235.pdb # 5: usage_00236.pdb # 6: usage_00237.pdb # 7: usage_00281.pdb # 8: usage_00343.pdb # # Length: 102 # Identity: 26/102 ( 25.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 54/102 ( 52.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/102 ( 18.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00232.pdb 1 ETVRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 52 usage_00233.pdb 1 --VRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 50 usage_00234.pdb 1 ETVRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 52 usage_00235.pdb 1 ETVRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 52 usage_00236.pdb 1 ETVRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 52 usage_00237.pdb 1 ETVRIALVGKY-----VELSDAYLSVAEALRAGGFKHRAKVEICWVASDGCET--TSG-A 52 usage_00281.pdb 1 --VRIAFVGKYLQDAG----DTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNADE-A 53 usage_00343.pdb 1 RTVKIAIAGKY-----V---DAYLSLLEALRHAGIKNRARVEVKWVDAESL------ADL 46 VrIA vGKY DaYlSv ealr g k ra vei wV s a usage_00232.pdb 53 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 94 usage_00233.pdb 51 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 92 usage_00234.pdb 53 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 94 usage_00235.pdb 53 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 94 usage_00236.pdb 53 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 94 usage_00237.pdb 53 AAALGDVHGVLIPGGFGIRGIEGKIGAIAYARARGLPVLGLC 94 usage_00281.pdb 54 RKALLGCDGIFVPGGFGNRGVDGKCAAAQVARMNNIPYFGV- 94 usage_00343.pdb 47 EEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGIC 88 Al dv G l PGGFG RGieGK A yAR r P lG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################