################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:50 2021 # Report_file: c_1490_185.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00003.pdb # 2: usage_00041.pdb # 3: usage_00675.pdb # 4: usage_01166.pdb # 5: usage_01226.pdb # 6: usage_01227.pdb # 7: usage_01346.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 57 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/ 57 ( 75.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 ---I----IFRL-LLNVLM-------SIIAIIS-----------YQWYEQLG----- 26 usage_00041.pdb 1 --------TVA--TYSK--TPGFPDLTPEQMKN-----------FAEAYTQG----- 29 usage_00675.pdb 1 -----------G-GGMIQG-------LGYLLSQITDYKQLTDMA-QHG--------- 28 usage_01166.pdb 1 ---V----QAVA-SAIGRA-------IEDEARF-----------GRIRDLEAKHFKK 31 usage_01226.pdb 1 IKAM----KKVA-GTLRLD-------LAQYREL-----------QAFAQFG------ 28 usage_01227.pdb 1 IKAM----KKVA-GTLRLD-------LAQYREL-----------QAFAQFG------ 28 usage_01346.pdb 1 ----SSAFGKLYSSVDDWV-------AKSQKQF-----------SEIG--------- 26 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################