################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:55 2021 # Report_file: c_1212_116.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00063.pdb # 2: usage_00177.pdb # 3: usage_00661.pdb # 4: usage_00662.pdb # 5: usage_00663.pdb # 6: usage_00760.pdb # 7: usage_00874.pdb # 8: usage_00922.pdb # 9: usage_00980.pdb # 10: usage_01191.pdb # 11: usage_01224.pdb # 12: usage_01337.pdb # 13: usage_01338.pdb # # Length: 36 # Identity: 5/ 36 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 36 ( 16.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 36 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 -ARTFDFD-ELVTTLSGGNGAGKSTTMAGFVTALIP 34 usage_00177.pdb 1 ENISFSISPGQRVGLLGRTGSGKSTLLSAFLR---- 32 usage_00661.pdb 1 -DTVVEFK-EGINLIIGQNGSGKSSLLDAILVGLY- 33 usage_00662.pdb 1 -DTVVEFK-EGINLIIGQNGSGKSSLLDAILVGL-- 32 usage_00663.pdb 1 -DTVVEFK-EGINLIIGQNGSGKSSLLDAILVGLY- 33 usage_00760.pdb 1 --VVIPFS-KGFTAIVGANGSGKSNIGDAILFVLG- 32 usage_00874.pdb 1 VNSRIKFE-KGIVAIIGENGSGKSSIFEAVFFALF- 34 usage_00922.pdb 1 ---RIKFE-KGIVAIIGENGSGKSSIFEAVFFALF- 31 usage_00980.pdb 1 VNSRIKFE-KGIVAIIGENGSGKSSIFEAVFFAL-- 33 usage_01191.pdb 1 ---SFAIERGSWTALIGHNGSGKSTVSKLING---- 29 usage_01224.pdb 1 -ARTFDFD-ELVTTLSGGNGAGKSTTMAGFVTALI- 33 usage_01337.pdb 1 -DTVVEFK-EGINLIIGQNGSGKSSLLDAILVGLY- 33 usage_01338.pdb 1 -DTVVEFK-EGINLIIGQNGSGKSSLLDAILVGLY- 33 G nG GKS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################