################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:25:04 2021 # Report_file: c_0385_36.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00002.pdb # 2: usage_00026.pdb # 3: usage_00035.pdb # 4: usage_00085.pdb # 5: usage_00086.pdb # 6: usage_00087.pdb # 7: usage_00116.pdb # 8: usage_00159.pdb # 9: usage_00169.pdb # 10: usage_00170.pdb # 11: usage_00173.pdb # 12: usage_00218.pdb # 13: usage_00222.pdb # 14: usage_00264.pdb # 15: usage_00292.pdb # 16: usage_00296.pdb # 17: usage_00324.pdb # 18: usage_00377.pdb # 19: usage_00416.pdb # 20: usage_00437.pdb # 21: usage_00438.pdb # 22: usage_00443.pdb # 23: usage_00460.pdb # 24: usage_00467.pdb # 25: usage_00478.pdb # 26: usage_00479.pdb # 27: usage_00497.pdb # 28: usage_00498.pdb # 29: usage_00499.pdb # 30: usage_00513.pdb # 31: usage_00543.pdb # 32: usage_00551.pdb # # Length: 98 # Identity: 11/ 98 ( 11.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 15/ 98 ( 15.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 48/ 98 ( 49.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTL---D-YLAIGWFRQAPGKEREGVSCVSSS-- 52 usage_00026.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGYA----Y-TYIYGWFRQAPGKEREGVAAD-SG-- 52 usage_00035.pdb 1 --QLVESGGGLVQPGGSLRLSCAASESIL---S-FNHMAWYRQGPGEQRELVAVITRE-- 52 usage_00085.pdb 1 --QLVESGGGLVQAGDSLRLSCAVS---------SNVIGWFRQAPGKEREFVAAISWS-- 47 usage_00086.pdb 1 ---------GLVQAGDSLRLSCAVSG--------SNVIGWFRQAPGKEREFVAAISWS-- 41 usage_00087.pdb 1 ---------GLVQAGDSLRLSCAVSGR-------SNVIGWFRQAPGKEREFVAAISWS-- 42 usage_00116.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGRAASGHG-HYGMGWFRQVPGKEREFVAAIRWS-- 55 usage_00159.pdb 1 ---------GSVQAGGSLRLSCAASGYTD---S-RYCMAWFRQAPGKEREWVARINSG-- 45 usage_00169.pdb 1 --VQLQES-----------LSCAASGRTF---S-SYAMGWFRQAPGKQREFVAAIRWS-- 41 usage_00170.pdb 1 -VQLVESGGGL--------LSCAASGRTF---S-SYAMGWFRQAPGKEREFVVAINWS-- 45 usage_00173.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGRTF---N-SAVMGWFRQAPGKERQFVATIDWS-- 52 usage_00218.pdb 1 --QLQESGGGLVQAGGSLRLSCTASRRT----GSNWCMGWFRQLAGKEPELVVALNFD-- 52 usage_00222.pdb 1 -VQLQESGGGSVQAGGSLRLSCAASGYTD---S-RYCMAWFRQAPGKEREWVARINSG-- 53 usage_00264.pdb 1 -VQLQESGGGSVQAGGSLRLSCAASEYIP---S-ANCMRWFRQA-PKEREWVASVLRG-- 52 usage_00292.pdb 1 -VQLQESGGGLVQAGGSLRLSCAVSGSIF---R-LSTMGWYRQAPGKQREFVASITSY-- 53 usage_00296.pdb 1 --QLVESGGGSVQAGGSLRLSCAASGF-----S-RKYMGWFRQAPGKEREGVAAIFID-- 50 usage_00324.pdb 1 -VQLVESGGGSVQAGESLRLSCAASGVTY---K-NYCIGWFRQAPGKDREGVVFINSD-- 53 usage_00377.pdb 1 QVQLQESGGGLVQPGGSLRLSCAASGSIY---S-LIAMGWYRQAPGKEHELVATISSG-- 54 usage_00416.pdb 1 --QLQESGGGLVQAGGSLRLSCAASGSIF---S-PNAMGWYRQAPGKERELVAARTNV-- 52 usage_00437.pdb 1 -VQLVESGGGLVQAGGSLRLSCAASRR-----S-SWAMAWFRQAPGKEREFVAKISGD-- 51 usage_00438.pdb 1 --QLVESGGGLVQAGGSLRLSCAASRRSS---R-SWAMAWFRQAPGKEREFVAKISGD-- 52 usage_00443.pdb 1 EVQLVESGGGLVQAGDSLRLSATASGRTF---S-RAVMGWFRQAPGKEREFVAAISAAPG 56 usage_00460.pdb 1 -VQLQESGGGSVQAGGSLTLSCAASGYAV---S-RYSMGWFRQAPGKENEGVAAIDSS-- 53 usage_00467.pdb 1 --QLQESGGGLVQAGGSLRLSCTASGRIS---S-SYDMGWFRQAPGKEREFVAAISWS-- 52 usage_00478.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGYAY---T-YIYMGWFRQAPGKEREGVAAMDSG-- 54 usage_00479.pdb 1 QVQLVESGGGLVQAGGSLRLSCAASGYAY---T-YIYMGWFRQAPGKEREGVAAMDSG-- 54 usage_00497.pdb 1 --QLVETGGGLVQPGESLRLSCVASGFTL---D-HSAVGWFRQVPGKEREKLLCINAN-- 52 usage_00498.pdb 1 --QLVETGGGLVQPGESLRLSCVASGFTL---D-HSAVGWFRQVPGKEREKLLCINAN-- 52 usage_00499.pdb 1 --QLVETGGGLVQPGESLRLSCVASGFTL---D-HSAVGWFRQVPGKEREKLLCINAN-- 52 usage_00513.pdb 1 --QLQESGGGLVQAGDSLKLSCEASGDSI---G-TYVIGWFRQAPGKERIYLATIGRN-- 52 usage_00543.pdb 1 ---------GLVQAGGSLRLSCAASG--------SDVMGWFRQAPGKEREFVAAVTRS-- 41 usage_00551.pdb 1 -VQLQESGGGLVQPGGSLRLSCAASGSIF---S-GNVMGWYRQAPGKLREWVAAITPQ-- 53 LSc S W RQ gk usage_00002.pdb 53 G-----QYTYY-ADS-VKGRFTISRDNAESTVYLQMNS 83 usage_00026.pdb 53 G-----GGTLY-ADS-VKGRFTISRDKGKNTVYLQDS- 82 usage_00035.pdb 53 ------GSTDY-ADS-VKGRFTISRDNAKNMVYLLMSN 82 usage_00085.pdb 48 T-----GSTYY-GRS-MKGRCAASRD---NTVALQLN- 74 usage_00086.pdb 42 T-----GSTYY-GRS-MKGRCAASRD--KNTVALQLNS 70 usage_00087.pdb 43 T-----GSTYY-GRS-MKGRCAASRDNAKNTVALQLNS 73 usage_00116.pdb 56 G-----KETWY-KDS-VKGRFTISRDNAKTTVYLQMNS 86 usage_00159.pdb 46 R-----DITYY-ADS-VKGRFTFSQDNAKNTVYLQMDS 76 usage_00169.pdb 42 G-----GYTYY-TDS-VKGRFTISRDNAKTTVYLQMNS 72 usage_00170.pdb 46 S-----GSTYY-ADS-VKGRFTISRDNAKNTMYLQMN- 75 usage_00173.pdb 53 G-----EYTYY-ADS-VKGRFTISRDNAKNTVYLQMTS 83 usage_00218.pdb 53 Y-----DMTYY-ADS-VKGRFTVSRDSGKNTVYLQMNS 83 usage_00222.pdb 54 R-----DITYY-ADS-VKGRFTFSQDNAKNTVYLQMDS 84 usage_00264.pdb 53 ------GYTWH-ADS-VKGRFTISGDNAKTAAYLQMNS 82 usage_00292.pdb 54 ------GDTNY-RDS-VKGRFTISRDNAKNTVYLQMN- 82 usage_00296.pdb 51 N-----GNTIY-ADS-VQGRFTISQDNAKNTVYLQMNS 81 usage_00324.pdb 54 G-----GITYY-ADS-VKGRFTISQDNAKNTVYLQMNS 84 usage_00377.pdb 55 ------STTYY-ADS-VKGRFTISRDNAKNTLYLQMNS 84 usage_00416.pdb 53 -------GSTY-ADS-VKGRFTVSRDNAKNTVYLQMNS 81 usage_00437.pdb 52 G-----RLTTY-GDS-VKGRFTISRDKGKNTVYLQMDS 82 usage_00438.pdb 53 G-----RLTTY-GDS-VKGRFTISRDNAEYLVYLQMDS 83 usage_00443.pdb 57 T----AYYAFY-ADS-VRGRFSISADSAKNTVYLQMNS 88 usage_00460.pdb 54 G-----VGTTY-ADS-VKGRFTISRDNAKDTVYLR--- 81 usage_00467.pdb 53 G-----GTTDY-ADS-VKGRFAISKDNAKNAVYLQMNS 83 usage_00478.pdb 55 G-----GGTLY-ADS-VKGRFTISRDKGKNTVYLQMDS 85 usage_00479.pdb 55 G-----GGTLY-ADS-VKGRFTISRDKGKNTVYLQMDS 85 usage_00497.pdb 53 ------GVSLDYADS-IKGRFTISRDNAKNTVYLQMN- 82 usage_00498.pdb 53 ------GVSLDYADS-IKGRFTISRDNAKNTVYLQMN- 82 usage_00499.pdb 53 ------GVSLDYADS-IKGRFTISRDNAKNTVYLQMND 83 usage_00513.pdb 53 LVGPSDFYTRY-ADS-VKGRFAVSRDNAKNTVNLQMN- 87 usage_00543.pdb 42 G-----G-KSY-NADSVKGRFTISRDNAKNTVSLQMN- 71 usage_00551.pdb 54 ------GVPNY-ADS-VKGRFTISRDNAKNMLYLQMSS 83 s GR S D L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################