################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:03:15 2021 # Report_file: c_0031_24.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00046.pdb # 4: usage_00182.pdb # # Length: 236 # Identity: 31/236 ( 13.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/236 ( 45.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/236 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -EVVVSFNDLSQPFFVA-RRELEDEAAKLGVKVQVLDAQNNSSKQISDLQAAAVQGAKVV 58 usage_00022.pdb 1 -EVVVSFNDLSQPFFVA-RRELEDEAAKLGVKVQVLDAQNNSSKQISDLQAAAVQGAKVV 58 usage_00046.pdb 1 VKIGFVVKQPDDPWFQDEWRFAEQAAKDKHFTLVKIAAP-SGEKVSTALDSLAAQKAQGV 59 usage_00182.pdb 1 ELVVFSLPNLSSPFEVQLQKVAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGI 60 vv s ls Pffv r e a kl k qvldaq s Kq sdL aa qgAk v usage_00021.pdb 59 IVAPTDSKALAGAADDLVEQGVAVISVDRNIAG------GKTAVPHVGADNVAGGRA-AD 111 usage_00022.pdb 59 IVAPTDSKALAGAADDLVEQGVAVISVDRNIAG------GKTAVPHVGADNVAGGRA-AD 111 usage_00046.pdb 60 IICAPDVKLGPGIAAKAKRYGMKLMSVDDQLVDGRGAPL-A-DVPHMGISAYRIGRQVGD 117 usage_00182.pdb 61 IISPNDVNAISGAVEEIIKEKIPAATLDRKVES-------SKPVPHFGANNYTGGQEVAK 113 I p D ka Gaa g svDr VPH Ga n gGr ad usage_00021.pdb 112 WVVKTYP-AGA---RVVVIT-NDPGSSSSIERVKGVHDGLAAGGP----AFKIVTEQTAN 162 usage_00022.pdb 112 WVVKTYP-AGA---RVVVIT-NDPGSSSSIERVKGVHDGLAAGGP----AFKIVTEQTAN 162 usage_00046.pdb 118 AIAAEAKRRGWNPAEVGVLRLAYDQLPTARERTTGAVDALKAAGFAAAN---VVDAPEMT 174 usage_00182.pdb 114 AVKAKYP-NGA---KIILLT-GQPGSTSNIERTKGIRDELAAGGD----KYKIVVDQTGN 164 v yp Ga v v t pgs s iER kG D LaAgG iV qt n usage_00021.pdb 163 SKRDQALTVTQNILTSRDTPP--DVILCLNDD-A-GALEAVRAAGLDSAKVKVIGF 214 usage_00022.pdb 163 SKRDQALTVTQNILTSRDTPP--DVILCLNDD-A-GALEAVRAAGLDSAKVKVIG- 213 usage_00046.pdb 175 ADTEGAFNAANIAFTKHR-NFRHWVAFGSNDDTTVGAVRAGEGRGIGTDDMIAVGI 229 usage_00182.pdb 165 WLRSEGLRIIESVLPTLKEKP--EVIISANDDMALGAIEALRSQGLKAGDILVTGF 218 r al lt p Vi NDD a GA eA r Gl v G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################