################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:38 2021 # Report_file: c_0039_4.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00139.pdb # 2: usage_00140.pdb # 3: usage_00141.pdb # 4: usage_00142.pdb # 5: usage_00152.pdb # # Length: 242 # Identity: 81/242 ( 33.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 226/242 ( 93.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/242 ( 6.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00139.pdb 1 --KTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIF 58 usage_00140.pdb 1 --KTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIF 58 usage_00141.pdb 1 --KTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIF 58 usage_00142.pdb 1 --KTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIF 58 usage_00152.pdb 1 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPIC 60 ktrdmEQllcekmnvkhAhlLsSgTAALqtAmmaAGigagDeVivppFTFvASVeaIf usage_00139.pdb 59 MAGAVPIFAEIDETLCLSPEGIEAVI---TPRTKAINLVHMCGSMAKMDEIKAICKKHNL 115 usage_00140.pdb 59 MAGAVPIFAEIDETLCLSPEGIEAVI---TPRTKAINLVHMCGSMAKMDEIKAICKKHNL 115 usage_00141.pdb 59 MAGAVPIFAEIDETLCLSPEGIEAVI---TPRTKAINLVHMCGSMAKMDEIKAICKKHNL 115 usage_00142.pdb 59 MAGAVPIFAEIDETLCLSPEGIEAVI---TPRTKAINLVHMCGSMAKMDEIKAICKKHNL 115 usage_00152.pdb 61 YLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDI 120 magAvPiFaeiDETlclspegieavI tprtKAinLvHmcGsmAKMDEIkaICKkhnl usage_00139.pdb 116 VLLEDACQAIGGSYKGQALGTIGDVGCYSFDSVKTITC-GEGGAVITNNTEIYDNAHMFS 174 usage_00140.pdb 116 VLLEDACQAIGGSYKGQALGTIGDVGCYSFDSVKTITC-GEGGAVITNNTEIYDNAHMFS 174 usage_00141.pdb 116 VLLEDACQAIGGSYKGQALGTIGDVGCYSFDSVKTITC-GEGGAVITNNTEIYDNAHMFS 174 usage_00142.pdb 116 VLLEDACQAIGGSYKGQALGTIGDVGCYSFDSVKTITC-GEGGAVITNNTEIYDNAHMFS 174 usage_00152.pdb 121 VLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYS 179 VLlEDAcqAiGgsYKgqALGTiGdvGcYSfdsvKtIT geGGavItnNtEiydnAhmfS usage_00139.pdb 175 DHGHDHIGKDRGAESHPIMGLNFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMA- 233 usage_00140.pdb 175 DHGHDHIGKDRGAESHPIMGLNFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMAS 234 usage_00141.pdb 175 DHGHDHIGKDRGAESHPIMGLNFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMA- 233 usage_00142.pdb 175 DHGHDHIGKDRGAESHPIMGLNFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMA- 233 usage_00152.pdb 180 TQAREN-C-L--HYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEF--- 232 dhghdh g d aesHpimGlNfRiSemnaAlGlAQlrkLdtiidiqRknkkaiKda usage_00139.pdb -- usage_00140.pdb 235 IP 236 usage_00141.pdb -- usage_00142.pdb -- usage_00152.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################