################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:12 2021 # Report_file: c_1299_99.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00072.pdb # 2: usage_00424.pdb # 3: usage_00431.pdb # 4: usage_00776.pdb # 5: usage_00831.pdb # 6: usage_00832.pdb # 7: usage_00833.pdb # 8: usage_01069.pdb # 9: usage_01103.pdb # 10: usage_01185.pdb # 11: usage_01189.pdb # 12: usage_01190.pdb # 13: usage_01325.pdb # # Length: 43 # Identity: 1/ 43 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 43 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 43 ( 65.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00072.pdb 1 KPEDTATYYCAAG-G------------YELRDRT-YGQWGQ-- 27 usage_00424.pdb 1 KPEDTALYYCAARLT------L---G-------Q-FDYWGQ-- 24 usage_00431.pdb 1 SQTDSDPVHGYWFRA------G---K-------A-PVATN--- 23 usage_00776.pdb 1 RSDDTAMYYCSRPDD------Y-SYD-------G-FAYWGQ-- 26 usage_00831.pdb 1 TSEDSAVYHCARGGS----------G-------L-LAYWGQ-- 23 usage_00832.pdb 1 TSEDSAVYHCARGGS----------G-------L-LAYWGQ-- 23 usage_00833.pdb 1 TSEDSAVYHCARGGS----------G-------L-LAYWGQ-- 23 usage_01069.pdb 1 RPEDTAVYYCVGGYS------NF--Y-------YYYTMDVWGQ 28 usage_01103.pdb 1 KSDDTAMYYCVIRG-------DV--Y----------NRQWGQ- 23 usage_01185.pdb 1 RSEDTAVYYCARSPSYICSGGT---C-------V-FDHWGQ-- 30 usage_01189.pdb 1 -SEDTALYYCARLYY------GY--G-------Y--WY-F--- 21 usage_01190.pdb 1 -SEDTALYYCARLYY------GY--G-------Y--WY-F--- 21 usage_01325.pdb 1 KPEDTAVYYCAADKY----------YTGPGGESV-YDYWGR-- 30 D a y c #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################