################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:44 2021 # Report_file: c_0300_30.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00077.pdb # 2: usage_00082.pdb # 3: usage_00083.pdb # 4: usage_00084.pdb # 5: usage_00085.pdb # 6: usage_00086.pdb # 7: usage_00087.pdb # 8: usage_00088.pdb # 9: usage_00089.pdb # 10: usage_00090.pdb # 11: usage_00091.pdb # 12: usage_00092.pdb # 13: usage_00543.pdb # 14: usage_00619.pdb # # Length: 107 # Identity: 14/107 ( 13.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/107 ( 29.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/107 ( 16.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00077.pdb 1 -TVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINN--S--QT- 54 usage_00082.pdb 1 -STLITGAGPLGLLGIAVAKA-SGAYPVIVSEPSEFRRKLAKKVGADYVVNP--FEE--- 53 usage_00083.pdb 1 -KVLVCGAGPIGV-TLLVA-K-AGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 52 usage_00084.pdb 1 -KVLVCGAGPIGV-TLLVA-K-AGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 52 usage_00085.pdb 1 -KVLVCGAGPIGV-TLLVA-K-AGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 52 usage_00086.pdb 1 -KVLVCGAGPIGV-TLLVA-K-AGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 52 usage_00087.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00088.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00089.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00090.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00091.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00092.pdb 1 -KVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQI--S--KES 54 usage_00543.pdb 1 -TVLVIGAGPIGLVSVLAAKA-YGA-FVVCTARSPRRLEVAKNCGADVTLVVDPA--KEE 55 usage_00619.pdb 1 NKVLVCGAGPIGLVNLLAAKA-MGAAQVVVTDLSASRLSKAKEVGADFILEI--S--NES 55 vLv GAGPiG a ga V v s Rl AK GAD usage_00077.pdb 55 ---PLGESFAEK-G-IKPTLIIDAACHPSILKEAVTLASPAARIVLM 96 usage_00082.pdb 54 --DP-VKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLL 97 usage_00083.pdb 53 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 97 usage_00084.pdb 53 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 97 usage_00085.pdb 53 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 97 usage_00086.pdb 53 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 97 usage_00087.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00088.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00089.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00090.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00091.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00092.pdb 55 PQEI-ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 99 usage_00543.pdb 56 ESSI-IERIRSAIG-DLPNVTIDCSGNEKCITIGINITRTGGTLMLV 100 usage_00619.pdb 56 PEEI-AKKVEGLLG-SKPEVTIECTGVETSIQAGIYATHSGGTLVLV 100 g p v i g g gg L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################