################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:58 2021 # Report_file: c_1302_132.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00182.pdb # 2: usage_00226.pdb # 3: usage_00470.pdb # 4: usage_00670.pdb # 5: usage_00682.pdb # 6: usage_00695.pdb # 7: usage_01035.pdb # 8: usage_01119.pdb # 9: usage_01356.pdb # # Length: 31 # Identity: 2/ 31 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 31 ( 16.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 31 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00182.pdb 1 -LRMCQLSCRKSLGCLLGKC-IGDKCKC--- 26 usage_00226.pdb 1 GTKDCYIPCRYITGCFNSRC-INKSCKCY-- 28 usage_00470.pdb 1 GSKDCYAPCRKQTGCPNAKC-INKSCKCY-- 28 usage_00670.pdb 1 GSKDCYAPCRKQTGCPNAKC-INKSCKCY-- 28 usage_00682.pdb 1 --SDCGRPCQQQT-GPNSKC-INRMCKCY-- 25 usage_00695.pdb 1 HSGQCLKPCKKAG-MRFGKC-INGKCDCTPK 29 usage_01035.pdb 1 -SPQCLKPCKDAG-MRFGKC-MNRKCHCT-- 26 usage_01119.pdb 1 ----ANRQCQFTFGEDSK-HCTCSTLWCT-- 24 usage_01356.pdb 1 GTSDCYEPCEKKYNCARAKC-MNRHCNCY-- 28 c C c c C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################