################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:40:50 2021 # Report_file: c_1399_71.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00033.pdb # 2: usage_00222.pdb # 3: usage_00308.pdb # 4: usage_00310.pdb # 5: usage_00311.pdb # 6: usage_00312.pdb # 7: usage_00313.pdb # 8: usage_00676.pdb # 9: usage_00916.pdb # 10: usage_00968.pdb # 11: usage_00993.pdb # 12: usage_00994.pdb # 13: usage_00995.pdb # 14: usage_00996.pdb # 15: usage_00997.pdb # 16: usage_00998.pdb # 17: usage_01477.pdb # 18: usage_01478.pdb # 19: usage_01479.pdb # 20: usage_01556.pdb # 21: usage_01583.pdb # # Length: 45 # Identity: 37/ 45 ( 82.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 45 ( 82.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 45 ( 17.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 44 usage_00222.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_00308.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 42 usage_00310.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 43 usage_00311.pdb 1 --AEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 41 usage_00312.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 44 usage_00313.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 42 usage_00676.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 43 usage_00916.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIIN- 43 usage_00968.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 42 usage_00993.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 44 usage_00994.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_00995.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_00996.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_00997.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_00998.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_01477.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIIN- 44 usage_01478.pdb 1 NEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 45 usage_01479.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 44 usage_01556.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQI------ 38 usage_01583.pdb 1 -EAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFII-- 42 AEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################