################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:13:17 2021 # Report_file: c_0145_25.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00045.pdb # 2: usage_00046.pdb # 3: usage_00073.pdb # 4: usage_00103.pdb # 5: usage_00141.pdb # 6: usage_00144.pdb # 7: usage_00158.pdb # 8: usage_00207.pdb # 9: usage_00208.pdb # 10: usage_00212.pdb # 11: usage_00281.pdb # 12: usage_00344.pdb # 13: usage_00346.pdb # 14: usage_00347.pdb # 15: usage_00490.pdb # 16: usage_00491.pdb # 17: usage_00533.pdb # 18: usage_00551.pdb # 19: usage_00569.pdb # # Length: 127 # Identity: 38/127 ( 29.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 58/127 ( 45.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/127 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 -VQLLESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 59 usage_00046.pdb 1 -VTLRESGPALVKPTQTLTLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYN 59 usage_00073.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGSTYYN 58 usage_00103.pdb 1 --KLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVSWVRQPPGKGLEWLGVIWGDGNTTYH 58 usage_00141.pdb 1 -VQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYN 59 usage_00144.pdb 1 --KLLESGPGLVAPSESLSITCTISGFSLTDDGVSWIRQPPGKGLEWLGVIWGGGSTYFN 58 usage_00158.pdb 1 QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVDWVRQPPGKGLEWVGVIWSGGSTNYN 60 usage_00207.pdb 1 ---LKESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYN 57 usage_00208.pdb 1 ---LKESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYN 57 usage_00212.pdb 1 ---LKESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYN 57 usage_00281.pdb 1 --QLVESGPGLVAPSQSLSITCTVSGISLSRYNVHWVRQSPGKGLEWLGMIWGGGSIEYN 58 usage_00344.pdb 1 -VRLQESGPGLVQPSQTLSLTCSVSGFSLISDSVHWVRQPPGKGLEWMGGIWADGSTEYN 59 usage_00346.pdb 1 QVRLQESGPGLVQPSQTLSLTCSVSGFSLISDSVHWVRQPPGKGLEWMGGIWADGSTEYN 60 usage_00347.pdb 1 --QLKQSGPGLVQPSQSLSITCTVSGLSLTSYGVHWVRQSPGKGLEWLGVIWSGGNTDYN 58 usage_00490.pdb 1 --QLKQSGPGLVQPSQSLSITCTVSGFSLIDYGVHWVRQSPGKGLEWLGVIWTGGSTDYN 58 usage_00491.pdb 1 --QLKQSGPGLVQPSQSLSITCTVSGFSLIDYGVHWVRQSPGKGLEWLGVIWTGGSTDYN 58 usage_00533.pdb 1 --QLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYN 58 usage_00551.pdb 1 -VQLKESGPGLVAPSQSLSISCSVSGFSLSSYGVHWVRQSPGQGLEWLGVIWSGGNTHYN 59 usage_00569.pdb 1 -VQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYN 59 L SGPgLV Psq Ls tC vSG L V W RQ PGkgLEW g IW G yn usage_00045.pdb 60 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWG-----GYY-IPYGMD-HWGQ 112 usage_00046.pdb 60 SALKSRLTISKDTSKNQVVLTMTNMDPVDTATYYCAGDGY------YP----YAMDNWGQ 109 usage_00073.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAKHTY------GG----PGD-SWGQ 107 usage_00103.pdb 59 SALISRLSISKDNSRSQVFLKLNSLHTDDTATYYCAGNY--------Y----GMD-YWGQ 105 usage_00141.pdb 60 SALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCARDFYDYDVF-YY----AMD-YWGQ 113 usage_00144.pdb 59 SLFKSRLSITRDNSKSQVFLEMDSLQTDDTAMYYCAKHDG------HE----TMD-YWGQ 107 usage_00158.pdb 61 SALMSRLSISKDNSKSQVFLKMNSLQTDDTAVYYCAKHWG-----GYY-IPYGMD-HWGQ 113 usage_00207.pdb 58 AAFISRLSISKDNSKSHVFFKMNSLQANDTAIYYCARMRI--T---TD----WFA-YWGQ 107 usage_00208.pdb 58 AAFISRLSISKDNSKSHVFFKMNSLQANDTAIYYCARMRI--T---TD----WFA-YWGQ 107 usage_00212.pdb 58 AAFISRLSISKDNSKSHVFFKMNSLQANDTAIYYCARMRI--T---TD----WFA-YWGQ 107 usage_00281.pdb 59 PALKSRLSISKDNSKSQIFLKMNSLQTDDSAMYYCVSYGY--G---GD----RFS-YWGQ 108 usage_00344.pdb 60 SALKSRLSISRDTSKSQGFLKMNSLQTDDTAIYFCTSNRE------SY----YFD-YWGQ 108 usage_00346.pdb 61 SALKSRLSISRDTSKSQGFLKMNSLQTDDTAIYFCTSNRE------SY----YFD-YWGQ 109 usage_00347.pdb 59 AAFISRLSISKDNSKNQVFFKMNSLRADDTAIYYCAIYY--------R----YGA-YWGQ 105 usage_00490.pdb 59 AAFISRLTISKDNSKSQVFFKMNSLQANDTGIYYCGRPYY------GN----VMD-YWGQ 107 usage_00491.pdb 59 AAFISRLTISKDNSKSQVFFKMNSLQANDTGIYYCGRPYY------GN----VMD-YWGQ 107 usage_00533.pdb 59 SALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPY------GS----KPMDYWGQ 108 usage_00551.pdb 60 SALMSRLSISKENSKNQVFLKMNSLQTDDTAIYYCARVGI--Y---YEG--AWFA-YWGQ 111 usage_00569.pdb 60 TPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT------YY-DY-EFA-YWGQ 110 SRl I d Sk f m sl Dt Y C WGQ usage_00045.pdb 113 GTTVTV- 118 usage_00046.pdb 110 GSLVTVS 116 usage_00073.pdb 108 GTSVTV- 113 usage_00103.pdb 106 GTSVTVS 112 usage_00141.pdb 114 GTSVTVS 120 usage_00144.pdb 108 GTSVTV- 113 usage_00158.pdb 114 GTTVTV- 119 usage_00207.pdb 108 GTLVTVS 114 usage_00208.pdb 108 GTLVTVS 114 usage_00212.pdb 108 GTLVTVS 114 usage_00281.pdb 109 GTLVTVS 115 usage_00344.pdb 109 GTMVTV- 114 usage_00346.pdb 110 GTMVTVS 116 usage_00347.pdb 106 GTLVTVS 112 usage_00490.pdb 108 GTSVTVS 114 usage_00491.pdb 108 GTSVTVS 114 usage_00533.pdb 109 GTSVTVS 115 usage_00551.pdb 112 GTLVTV- 117 usage_00569.pdb 111 GTLVTVS 117 Gt VTV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################