################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:58 2021 # Report_file: c_1200_396.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00673.pdb # 2: usage_01289.pdb # 3: usage_02585.pdb # 4: usage_02586.pdb # 5: usage_02587.pdb # 6: usage_02788.pdb # 7: usage_03393.pdb # 8: usage_03559.pdb # 9: usage_04511.pdb # 10: usage_05047.pdb # 11: usage_05344.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 40 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 40 ( 65.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00673.pdb 1 GSFVR------DVEFSPDS-GEFVITVGSD---RKISCFD 30 usage_01289.pdb 1 ----HTAFDGRGNAYTSLFLD-SQVVKWN----------- 24 usage_02585.pdb 1 -SSV-------RGVAFSPD-GQTIASASDD---KTVKLWN 28 usage_02586.pdb 1 -SSV-------RGVAFSPD-GQTIASASDD---KTVKLWN 28 usage_02587.pdb 1 -SSV-------WGVAFSPD-GQTIASASDD---KTVKLWN 28 usage_02788.pdb 1 KLGV-------LDIDWHPR-EPWCVSAGAD---GTARLWM 29 usage_03393.pdb 1 -----------ALKYAH---GGILVSGSTD---RTVRVWD 23 usage_03559.pdb 1 SNSI-------RSVKFSPQ-GSLLAIAHDSNSFGCITLYE 32 usage_04511.pdb 1 ----Y------SLAFSSVD-IGSLAIGVGD---GMIRVWN 26 usage_05047.pdb 1 -----------KKVAVNSG-GKHCLALSSE---GEVYSWG 25 usage_05344.pdb 1 --RV-------LSLTMSPD-GATVASAAAD---ETLRLWR 27 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################