################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:25:44 2021 # Report_file: c_1110_19.html ################################################################################################ #==================================== # Aligned_structures: 26 # 1: usage_00017.pdb # 2: usage_00038.pdb # 3: usage_00039.pdb # 4: usage_00040.pdb # 5: usage_00041.pdb # 6: usage_00083.pdb # 7: usage_00084.pdb # 8: usage_00085.pdb # 9: usage_00097.pdb # 10: usage_00098.pdb # 11: usage_00099.pdb # 12: usage_00176.pdb # 13: usage_00177.pdb # 14: usage_00178.pdb # 15: usage_00179.pdb # 16: usage_00180.pdb # 17: usage_00181.pdb # 18: usage_00228.pdb # 19: usage_00309.pdb # 20: usage_00344.pdb # 21: usage_00345.pdb # 22: usage_00350.pdb # 23: usage_00351.pdb # 24: usage_00376.pdb # 25: usage_00377.pdb # 26: usage_00378.pdb # # Length: 70 # Identity: 56/ 70 ( 80.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/ 70 ( 87.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 70 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 60 usage_00038.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00039.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00040.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00041.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00083.pdb 1 -RDSVKQALKNYFAQ---QDVNDLYELVLAEVEQPLLDMVMQYTRANQTRAALMMGINRG 56 usage_00084.pdb 1 -RDSVKQALKNYFAQ----LVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 55 usage_00085.pdb 1 -RDSVKQALKNYFAQ----DVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 55 usage_00097.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00098.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQALLDMVMQYTRGNQTRAALMMGINRG 60 usage_00099.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQALLDMVMQYTRGNQTRAALMMGINRG 59 usage_00176.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00177.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00178.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 60 usage_00179.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00180.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 60 usage_00181.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00228.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00309.pdb 1 --DSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 58 usage_00344.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTYGNQTRAALMMGINRG 60 usage_00345.pdb 1 -RDSVKQALKNYFAQ----DVNDLYELVLAEVEQPLLDMVMQYTRGNATRAALMMGINRG 55 usage_00350.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00351.pdb 1 --DSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 58 usage_00376.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 usage_00377.pdb 1 LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 60 usage_00378.pdb 1 -RDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRG 59 DSVKQALKNYFAQ dVNDLYELVLAEVEQ LLDMVMQYTrgNqTRAALMMGINRG usage_00017.pdb 61 TLRKKLKKYG 70 usage_00038.pdb 60 TLRKKLKKYG 69 usage_00039.pdb 60 TLRKKLKKYG 69 usage_00040.pdb 60 TLRKKLKKYG 69 usage_00041.pdb 60 TLRKKLKK-- 67 usage_00083.pdb 57 TLRKKLKKYG 66 usage_00084.pdb 56 TLRKKLKKYG 65 usage_00085.pdb 56 TLRKKLKKYG 65 usage_00097.pdb 60 TLRKKLKKYG 69 usage_00098.pdb 61 TLRKKLKKYG 70 usage_00099.pdb 60 TLRKKLKKY- 68 usage_00176.pdb 60 TLRKKLKKYG 69 usage_00177.pdb 60 TLRKKLKKY- 68 usage_00178.pdb 61 TLRKKLKKY- 69 usage_00179.pdb 60 TLRKKLKKYG 69 usage_00180.pdb 61 TLRKKLKKY- 69 usage_00181.pdb 60 TLRKKLKKYG 69 usage_00228.pdb 60 TLRKKLKKY- 68 usage_00309.pdb 59 TLCKKLKKYG 68 usage_00344.pdb 61 TLRKKLKKYG 70 usage_00345.pdb 56 TLRKKLKKYG 65 usage_00350.pdb 60 TLRKKLKKYG 69 usage_00351.pdb 59 TLRKKLKKY- 67 usage_00376.pdb 60 TLRKKLKK-- 67 usage_00377.pdb 61 TLRKKLKKY- 69 usage_00378.pdb 60 TLRKKLKKY- 68 TLrKKLKK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################