################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:34:25 2021 # Report_file: c_1320_21.html ################################################################################################ #==================================== # Aligned_structures: 40 # 1: usage_00029.pdb # 2: usage_00044.pdb # 3: usage_00052.pdb # 4: usage_00054.pdb # 5: usage_00065.pdb # 6: usage_00066.pdb # 7: usage_00068.pdb # 8: usage_00069.pdb # 9: usage_00071.pdb # 10: usage_00086.pdb # 11: usage_00096.pdb # 12: usage_00173.pdb # 13: usage_00181.pdb # 14: usage_00183.pdb # 15: usage_00186.pdb # 16: usage_00207.pdb # 17: usage_00239.pdb # 18: usage_00243.pdb # 19: usage_00319.pdb # 20: usage_00327.pdb # 21: usage_00338.pdb # 22: usage_00340.pdb # 23: usage_00345.pdb # 24: usage_00362.pdb # 25: usage_00388.pdb # 26: usage_00400.pdb # 27: usage_00436.pdb # 28: usage_00437.pdb # 29: usage_00452.pdb # 30: usage_00462.pdb # 31: usage_00484.pdb # 32: usage_00487.pdb # 33: usage_00523.pdb # 34: usage_00529.pdb # 35: usage_00530.pdb # 36: usage_00586.pdb # 37: usage_00591.pdb # 38: usage_00606.pdb # 39: usage_00607.pdb # 40: usage_00613.pdb # # Length: 35 # Identity: 3/ 35 ( 8.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 35 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 35 ( 40.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 QPEDFATYYCQQWS-G--N-PWTFGQGTKVEI--- 28 usage_00044.pdb 1 -PEDLATYYCQQYD-S--L-PLTFGGGTKVEIKRT 30 usage_00052.pdb 1 QPEDFATYYCQQHY-T--T-PPTFGQGTKVEIKRT 31 usage_00054.pdb 1 -PEDEGVYTCEVDNGV--G-KPQ-KHSLKLTVVSA 30 usage_00065.pdb 1 QPEDFATYYCQQNN-V--D-PWTFGQGTKLEIKRT 31 usage_00066.pdb 1 QPEDFATYYCQQNN-V--D-PWTFGQGTKLEI--- 28 usage_00068.pdb 1 -PEDFATYYCQQSY-S--T-PNTFGQGTKVEI--- 27 usage_00069.pdb 1 -PEDFATYYCQQSY-S--T-PNTFGQGTKVEI--- 27 usage_00071.pdb 1 -PEDFATYYCQQYY-SYYY-PFTFGQGTKVEIKRT 32 usage_00086.pdb 1 QPEDFATYYCQQ---------ITFGQGTKVEI--- 23 usage_00096.pdb 1 QPDDFATYYCQQYN-S-----YSFGPGTKVDI--- 26 usage_00173.pdb 1 RPEDFATYYCQQLH-F--Y-PHTFGGGTRVDV--- 28 usage_00181.pdb 1 QPEDFATYYCQQGN-T--L-PPTFGQGTKVEIKRT 31 usage_00183.pdb 1 QPEDFATYYCQQSN-T--S-PLTFGQGTKVEIKRT 31 usage_00186.pdb 1 QPEDFATYYCSQNT-L--V-PWTFGQGTKVEIKRT 31 usage_00207.pdb 1 QPEDFASYYCQESL-S--A-SYTFGQGTKVEIKRT 31 usage_00239.pdb 1 -SEDFADYYCLQHD-T--F-PLTFGGGTKLEIKRT 30 usage_00243.pdb 1 QPEDFATYYCQQYY-I--Y-PYTFGQGTKVEIKG- 30 usage_00319.pdb 1 EPEDFAVYYCQQFG-S--S-PWTFGQGTKVEI--- 28 usage_00327.pdb 1 QPEDFANYYCQHFW-S--L-PFTFGQGTKVEI--- 28 usage_00338.pdb 1 QPEDSATYYCQQSY-S--T-PFTFGPGTKVDIRRT 31 usage_00340.pdb 1 QPEDFATYYCQQSY-S--T-PFTFGPGTKVDI--- 28 usage_00345.pdb 1 QAEDVAVYYCQQYD-N--Y-PITFGQGTRLEIKRT 31 usage_00362.pdb 1 EPEDFAVYYCQQGN-E--V-PFTFGQGTKVEIKRT 31 usage_00388.pdb 1 -PEDVGTYYCQQLN-T--Y-PFTFGPGTKVEIKRT 30 usage_00400.pdb 1 -PEDFAVYYCQHSR-D--L-PLTFGGGTKVEIKRT 30 usage_00436.pdb 1 -PEDFATYYCQHLI-G----LRSFGQGTKLEIKRT 29 usage_00437.pdb 1 QPEDFATYYCQHLI-G----LRSFGQGTKLEIKRT 30 usage_00452.pdb 1 -PEDFATYYCGGGY-SS-ISDTTFGGGTKVEI--- 29 usage_00462.pdb 1 ESGDFGVYYCQQY--------EFFGQGTKVQVDIK 27 usage_00484.pdb 1 QPEDFATYYCQQSE-P--E-PYTFGQGTKVEIKRT 31 usage_00487.pdb 1 QAEDVAVYYCQQYY-S--T-PLTFGQGTKVEIKRT 31 usage_00523.pdb 1 -AEDAGTYYCMQNK-Q--T-PLTFGQGTRLEIKRT 30 usage_00529.pdb 1 -PEDFATYYCQQS--------RTFGQGTKVEIKRT 26 usage_00530.pdb 1 -PEDFATYYCQQS--------RTFGQGTKVEIKRT 26 usage_00586.pdb 1 -PDDFATYYCFQGS-G--Y-PFTFGGGTKLEI--- 27 usage_00591.pdb 1 QPEDFATYYCQQSH-E--D-PYTFGQGTKVEIKRT 31 usage_00606.pdb 1 QAEDVAIYYCQQYF-S--P-PYTFGQGTKLEIKRT 31 usage_00607.pdb 1 QAEDVAIYYCQQYF-S--P-PYTFGQGTKLEIKRT 31 usage_00613.pdb 1 RPEDFATYYCQQLH-F--Y-PHTFGGGTRVDV--- 28 D YyC g gt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################