################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:45 2021 # Report_file: c_0821_63.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00054.pdb # 2: usage_00813.pdb # 3: usage_01017.pdb # 4: usage_01219.pdb # 5: usage_01347.pdb # 6: usage_01348.pdb # # Length: 70 # Identity: 4/ 70 ( 5.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 70 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 70 ( 22.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 GVLTALNKIFAEQGVNIAAQYLQTS-----AQMGYVVIDIEADEDV-AEKALQAMKAIPG 54 usage_00813.pdb 1 GVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG--D-FEKILERVKTFDY 57 usage_01017.pdb 1 GALGKIGTLLGTAGVNIQAAQLSEDAE---GPGATILLRLDQD---VPDDVRTAIAAAVD 54 usage_01219.pdb 1 -VLTALNKIFAEQGVNIAAQYLQTS-----AQMGYVVIDIEADEDV-AEKALQAMKAIPG 53 usage_01347.pdb 1 GVLTALNKIFAEQGVNIAAQYLQTS-----AQ-GYVVIDIEADEDV-AEKALQAK-AIPG 52 usage_01348.pdb 1 GVLTALNKIFAEQGVNIAAQYLQTS-----AQ-GYVVIDIEADEDV-AEKALQAK-AIPG 52 vL l i ae GvNI a l ie d ek l a a usage_00054.pdb 55 TIRARL-LY- 62 usage_00813.pdb 58 IIEIEE---- 63 usage_01017.pdb 55 AYKLEVVDLS 64 usage_01219.pdb 54 TIRARL-LY- 61 usage_01347.pdb 53 TIRARL---- 58 usage_01348.pdb 53 TIRARL---- 58 i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################