################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:10 2021 # Report_file: c_0227_4.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00015.pdb # 3: usage_00020.pdb # 4: usage_00021.pdb # # Length: 120 # Identity: 43/120 ( 35.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/120 ( 89.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/120 ( 9.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 IAFVKDVANITMNDEEAMVEAVALYNPVSFAFEV-TNDFLMYRKGIYSSTSCHKTPDKVN 59 usage_00015.pdb 1 VANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE--DMD 57 usage_00020.pdb 1 VANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE--DMD 57 usage_00021.pdb 1 VANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE--DMD 57 vAnd gfvdIpk qEkAlmkAVAtvgPiSvAida hesFLfYkeGIYfepdCsse dmd usage_00001.pdb 60 HAVLAVGYGEEN---G-IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAA-CASYPIPLV 114 usage_00015.pdb 58 HGVLVVGYGFES---N-NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV-- 111 usage_00020.pdb 58 HGVLVVGYGFESTESDDNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV-- 115 usage_00021.pdb 58 HGVLVVGYGFESTESDDNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV-- 115 HgVLvVGYGfEs nkYWlVKNSWGeeWGMgGYvkmakdrrnhcgiA aASYPtv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################