################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:12:11 2021 # Report_file: c_0243_13.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00089.pdb # 2: usage_00090.pdb # 3: usage_00091.pdb # 4: usage_00121.pdb # 5: usage_00232.pdb # 6: usage_00233.pdb # 7: usage_00234.pdb # 8: usage_00235.pdb # 9: usage_00236.pdb # 10: usage_00237.pdb # 11: usage_00238.pdb # 12: usage_00239.pdb # 13: usage_00245.pdb # 14: usage_00267.pdb # # Length: 145 # Identity: 55/145 ( 37.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/145 ( 47.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/145 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 LIVNVINGPNLGRLARREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00090.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00091.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00121.pdb 1 KKILLLNGPNLNMLGKR----IYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEESLINR 56 usage_00232.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00233.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00234.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00235.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00236.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00237.pdb 1 LIVNVINGPNLGRLGRR-E-----GTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 54 usage_00238.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00239.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 usage_00245.pdb 1 STILVIHGPNLNLLGKR-EPEVYGHLTLDNINRQLIAQAEQASITLDTFQSNWEGAIVDR 59 usage_00267.pdb 1 LIVNVINGPNLGRLGRREP-AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDW 59 vinGPNL Lg R T d A g Qs E l d usage_00089.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00090.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00091.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00121.pdb 57 IHQAFQNTD-FIIINPGAFTHTSVAIRDALLAVSIPFIEVHLSNVHAREPFRHHSYLSDV 115 usage_00232.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00233.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00234.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00235.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00236.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00237.pdb 55 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 113 usage_00238.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00239.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 usage_00245.pdb 60 IHQAQTEGVKLIIINPAALTHTSVALRDALLGVAIPFIEVHLSNVHAREAFRHHSYLSDK 119 usage_00267.pdb 60 IHQAADAAE-PVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPI 118 IHQA I N g lTHTSVAlRDA s P IEVH SNVHARE FR HSYLS usage_00089.pdb 119 ATGVIVGLGIQGYLLALRYLAEH-- 141 usage_00090.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00091.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00121.pdb 116 AKGVICGLGAKGYDYALDFAISELQ 140 usage_00232.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00233.pdb 119 ATGVIVGLGIQGYLLALRYLAEH-- 141 usage_00234.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00235.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00236.pdb 119 ATGVIVGLGIQGYLLALRYLA---- 139 usage_00237.pdb 114 ATGVIVGLGIQGYLLALRYLAEH-- 136 usage_00238.pdb 119 ATGVIVGLGIQGYLLALRYLAEH-- 141 usage_00239.pdb 119 ATGVIVGLGIQGYLLALRYLAEH-- 141 usage_00245.pdb 120 AIGVICGLGAKGYSFALDYAIEKIQ 144 usage_00267.pdb 119 ATGVIVGLGIQGYLLALRYLAEH-- 141 A GVI GLG GY AL y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################