################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:14 2021 # Report_file: c_0530_9.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00058.pdb # 5: usage_00099.pdb # 6: usage_00105.pdb # 7: usage_00106.pdb # 8: usage_00107.pdb # 9: usage_00111.pdb # 10: usage_00112.pdb # # Length: 120 # Identity: 23/120 ( 19.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/120 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/120 ( 10.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 DRKEAKRMDRFCHFAVCASQQAINDAKL-VIN-ELNADEIGVLIGTGIGGLKVLEDQQTI 58 usage_00048.pdb 1 SAKEARKLDLFIQYGLAASFQAVRDSGL-EVT-DANRERIGVSMGSGIGGLTNIENNCRS 58 usage_00049.pdb 1 SAKEARKLDLFIQYGLAASFQAVRDSGL-EVT-DANRERIGVSMGSGIGGLTNIENNCRS 58 usage_00058.pdb 1 SAKEARKLDLFIQYGLAASFQAVRDSGL-EVT-DANRERIGVSMGSGIGGLTNIENNCRS 58 usage_00099.pdb 1 DKKEARRMDRFTQYAIVAAREAVKDAQL-DIN-ENTADRIGVWIGSGIGGMETFEIAHKQ 58 usage_00105.pdb 1 DRKELRRLDRFVQYALIAAQLALEDAGL-KPE-DLDPERVGTLVGTGIGGMETWEAQSRV 58 usage_00106.pdb 1 DRKELRRLDRFVQYALIAAQLALEDAGL-KPE-DLDPERVGTLVGTGIGGMETWEAQSRV 58 usage_00107.pdb 1 ---------NFIGYAVCAADEALRDAEWLPT-EEEEKERTGVSIGGGIGSICDIVEAAQL 50 usage_00111.pdb 1 SAKEARKLDLFIQYGLAASFQAVRDSGL-EVT-DANRERIGVSMGSGIGGLTNIENNCRS 58 usage_00112.pdb 1 SAKEARKLDLFIQYGLAASFQAVRDSGL-EVT-DANRERIGVSMGSGIGGLTNIENNCRS 58 F y A A D l r G G GIGg e usage_00047.pdb 59 LLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNG 118 usage_00048.pdb 59 LFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTAQTTGTHSIGMAARNIAY- 117 usage_00049.pdb 59 LFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTAQTTGTHSIGMAARNIAY- 117 usage_00058.pdb 59 LFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTACTTGTHSIGMAARNIAYG 118 usage_00099.pdb 59 LMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRG 118 usage_00105.pdb 59 FLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL- 117 usage_00106.pdb 59 FLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLG 118 usage_00107.pdb 51 ICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQF- 109 usage_00111.pdb 59 LFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTACTTGTHSIGMAARNIAYG 118 usage_00112.pdb 59 LFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTACTTGTHSIGMAARNIAYG 118 gp R SPFf P i nM s G GP TA tG G A r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################