################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:49:53 2021 # Report_file: c_1010_5.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00026.pdb # 2: usage_00048.pdb # 3: usage_00568.pdb # 4: usage_00569.pdb # 5: usage_00570.pdb # 6: usage_00571.pdb # 7: usage_00615.pdb # 8: usage_00616.pdb # # Length: 79 # Identity: 2/ 79 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 79 ( 22.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 79 ( 55.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 ---------------TGTFLDEISHDIPHQNW-------GEKEWDLDFQHKRI-----GI 33 usage_00048.pdb 1 DEVKYSEEVCNEQVDLYLLVDGS-GSIG----YPNWITKVIPMLNGLINSLS-LSRDTIN 54 usage_00568.pdb 1 --------------DLYLLMDCS-GSIR----RHNWVKHAVPLAMKLIQQLN-LNENAIH 40 usage_00569.pdb 1 --------------DLYLLMDCS-GSIR----RHNWVKHAVPLAMKLIQQLN-LNENAIH 40 usage_00570.pdb 1 --------------DLYLLMDCS-GSIR----RHNWVKHAVPLAMKLIQQLN-LNENAIH 40 usage_00571.pdb 1 --------------DLYLLMDCS-GSIR----RHNWVKHAVPLAMKLIQQLN-LNENAIH 40 usage_00615.pdb 1 --------------DLYLLMDGS-GSIR----RHNWVNHAVPLAMKLIQQLN-LNDNAIH 40 usage_00616.pdb 1 --------------DLYLLMDGS-GSIR----RHNWVNHAVPLAMKLIQQLN-LNDNAIH 40 lyll D s gsI p liq l i usage_00026.pdb 34 DTVIIRSGYRKFT------ 46 usage_00048.pdb 55 LYMNL-FGS----YTTELI 68 usage_00568.pdb 41 LYANI-FSN----NAKEII 54 usage_00569.pdb 41 LYANI-FSN----NAKEII 54 usage_00570.pdb 41 LYANI-FSN----NAKEII 54 usage_00571.pdb 41 LYANI-FSN----NAKEII 54 usage_00615.pdb 41 LYASV-FSN----NAREII 54 usage_00616.pdb 41 LYASV-FSN----NAREII 54 ly f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################