################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:29 2021 # Report_file: c_1013_21.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00033.pdb # 2: usage_00142.pdb # 3: usage_00143.pdb # 4: usage_00144.pdb # 5: usage_00177.pdb # 6: usage_00235.pdb # # Length: 42 # Identity: 1/ 42 ( 2.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 42 ( 7.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 42 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 RIGLLG--------ASGYTGAEIVRLLANHPHF-QVTLMTA- 32 usage_00142.pdb 1 RIGLLG--------ASGYTGAEIVRLLANHPHF-QVTLMTA- 32 usage_00143.pdb 1 RIGLLG--------ASGYTGAEIVRLLANHPHF-QVTLMTA- 32 usage_00144.pdb 1 GHALVL--------GSGGTAPAAVVGLAELGV-TDITVVA-- 31 usage_00177.pdb 1 KVII-I--------GAGIAGLKAASTLHQNGI-QDCLVLEA- 31 usage_00235.pdb 1 HISIVGSSLVSDDKQKG-FGHQFINAMDANGL-RVDVSVRSS 40 G g l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################