################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:25 2021 # Report_file: c_1365_63.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00033.pdb # 4: usage_00034.pdb # 5: usage_00071.pdb # 6: usage_00072.pdb # 7: usage_00090.pdb # 8: usage_00103.pdb # 9: usage_00113.pdb # 10: usage_00114.pdb # 11: usage_00152.pdb # 12: usage_00154.pdb # 13: usage_00155.pdb # 14: usage_00156.pdb # 15: usage_00157.pdb # 16: usage_00176.pdb # 17: usage_00203.pdb # 18: usage_00204.pdb # 19: usage_00222.pdb # 20: usage_00307.pdb # # Length: 39 # Identity: 5/ 39 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 39 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 39 ( 25.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00015.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00033.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00034.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00071.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00072.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00090.pdb 1 VAMELEN-IALNDPYFIEKKLYPNVDFYSGIILKAMG-- 36 usage_00103.pdb 1 KLDLRDDKDT--IEKLKEKKLAPI--TYPQGLALAKEI- 34 usage_00113.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00114.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00152.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00154.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00155.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00156.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00157.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00176.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 usage_00203.pdb 1 KLDLRDDKDT--IEKLKEKKLAPI--TYPQGLALAKEID 35 usage_00204.pdb 1 KLDLRDDKDT--IEKL---KLAPI--TYPQGLALAKEID 32 usage_00222.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEI- 34 usage_00307.pdb 1 KLDLRDDKDT--IEKLKEKKLTPI--TYPQGLAMAKEIG 35 kldlrdd dt iekl KL Pi tYpqgla Ake #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################