################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:01:17 2021 # Report_file: c_0073_3.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00018.pdb # 5: usage_00019.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00026.pdb # 9: usage_00027.pdb # # Length: 199 # Identity: 61/199 ( 30.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 61/199 ( 30.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/199 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --QVALVIGGGNIFRG---AGLAAS-GMDRVTGDHMGMLATVINALAMQDALEKLGAKVR 54 usage_00002.pdb 1 --QVALVIGGGNIFRG---AGLAAS-GMDRVTGDHMGMLATVINALAMQDALEKLGAKVR 54 usage_00003.pdb 1 --QVALVIGGGNIFRG---AGLAAS-GMDRVTGDHMGMLATVINALAMQDALEKLGAKVR 54 usage_00018.pdb 1 DIEVGIVIGGGNIIRG-VSAAQ--GGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTR 57 usage_00019.pdb 1 DIEVGIVIGGGNIIRG-VSAAQ--GGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTR 57 usage_00024.pdb 1 GVQIAVVIGGGNFFRGA-QLQQ--L-GMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTR 56 usage_00025.pdb 1 GVQIAVVIGGGNFFRGA-QLQQ--L-GMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTR 56 usage_00026.pdb 1 --QVALVIGGGNIFRG---AGLAAS-GMDRVTGDHMGMLATVINALAMQDALEKLGAKVR 54 usage_00027.pdb 1 --QVALVIGGGNIFRG---AGLAAS-GMDRVTGDHMGMLATVINALAMQDALEKLGAKVR 54 VIGGGN RG R D MGML TV N A Q LE G R usage_00001.pdb 55 VMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLK 114 usage_00002.pdb 55 VMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLK 114 usage_00003.pdb 55 VMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLK 114 usage_00018.pdb 58 VQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIK 117 usage_00019.pdb 58 VQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIK 117 usage_00024.pdb 57 VQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLM 116 usage_00025.pdb 57 VQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLM 116 usage_00026.pdb 55 VMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLK 114 usage_00027.pdb 55 VMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLK 114 V AI E A RHLEKGR IF AG G P F TD A RA EIG D usage_00001.pdb 115 ATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEP 174 usage_00002.pdb 115 ATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEP 174 usage_00003.pdb 115 ATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEP 174 usage_00018.pdb 118 ATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKK 177 usage_00019.pdb 118 ATKVDGIYDKD------AKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKK 171 usage_00024.pdb 117 AKAVDGV-------------LTAVSHREVLDRGLR-ADATAFSLCMDNGMPILVFNLLTD 162 usage_00025.pdb 117 AKAVDGVFAED-------ELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLLTD 169 usage_00026.pdb 115 ATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEP 174 usage_00027.pdb 115 ATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEP 174 A VDG D A L D P usage_00001.pdb 175 GVLLRILHGAQIGTLV-Q- 191 usage_00002.pdb 175 GVLLRILHGAQIGTLV-Q- 191 usage_00003.pdb 175 GVLLRILHGAQIGTLV-QG 192 usage_00018.pdb 178 GNLLQVIKHQQGVFSMVK- 195 usage_00019.pdb 172 GNLLQVIKHQQGVFSMVK- 189 usage_00024.pdb 163 GNIARAVRGEKIGTLV-TT 180 usage_00025.pdb 170 GNIARAVRGEKIGTLV-TT 187 usage_00026.pdb 175 GVLLRILHGAQIGTLV-Q- 191 usage_00027.pdb 175 GVLLRILHGAQIGTLV-Q- 191 G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################