################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 06:23:26 2021 # Report_file: c_0281_2.html ################################################################################################ #==================================== # Aligned_structures: 46 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00009.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00013.pdb # 9: usage_00019.pdb # 10: usage_00020.pdb # 11: usage_00022.pdb # 12: usage_00023.pdb # 13: usage_00024.pdb # 14: usage_00025.pdb # 15: usage_00026.pdb # 16: usage_00028.pdb # 17: usage_00029.pdb # 18: usage_00030.pdb # 19: usage_00035.pdb # 20: usage_00036.pdb # 21: usage_00038.pdb # 22: usage_00044.pdb # 23: usage_00045.pdb # 24: usage_00047.pdb # 25: usage_00049.pdb # 26: usage_00064.pdb # 27: usage_00065.pdb # 28: usage_00068.pdb # 29: usage_00070.pdb # 30: usage_00071.pdb # 31: usage_00072.pdb # 32: usage_00073.pdb # 33: usage_00074.pdb # 34: usage_00075.pdb # 35: usage_00076.pdb # 36: usage_00077.pdb # 37: usage_00078.pdb # 38: usage_00079.pdb # 39: usage_00084.pdb # 40: usage_00085.pdb # 41: usage_00086.pdb # 42: usage_00087.pdb # 43: usage_00088.pdb # 44: usage_00089.pdb # 45: usage_00090.pdb # 46: usage_00094.pdb # # Length: 114 # Identity: 6/114 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/114 ( 11.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/114 ( 29.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 KSYNVTAVRFRKKMCEYLTMTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00005.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00006.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00007.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00009.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00010.pdb 1 KSYNVTSVLFRKKKCDYAIATFVPGSQPGEFTLG-NIKSY-PGL-TSFLVRVVSTNYNQH 57 usage_00011.pdb 1 -GLNLTSTFLRKN-CETKIMVLQPAGAPGHYTYSSP---H-SG--SIHSVSVVEANYDEY 52 usage_00013.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00019.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00020.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00022.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00023.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00024.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00025.pdb 1 ---NVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 54 usage_00026.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00028.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00029.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00030.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00035.pdb 1 ---NVTSVGFDDKKCLYKIRTFVPGSQPGEFTLG-RIKSE-PGG-TSWLVRVVSTNYNQH 54 usage_00036.pdb 1 ----VTSILVRGQGCRYWIRTFVPSSRPGQFTLG-NIHSY-PQI-QSYDVQVADTDYDQF 53 usage_00038.pdb 1 -EFQVTNSMTRGKHCSTWSYTLIPTNKPGQFTRD-N-RGSG-PGADKENIQVIETDYVKF 56 usage_00044.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00045.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00047.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00049.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00064.pdb 1 KSYNVTSVISSHKKCEYTIATFVPGSQPGEFTL------------TSYLVRVVSTDYNQY 48 usage_00065.pdb 1 KSYNVTSVISSHKKCEYTIATFVPGSQPGEFTLG-----------TSYLVRVVSTDYNQY 49 usage_00068.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSFLVRVVSTNYNQH 57 usage_00070.pdb 1 KSYNVTAVRFRKKKCDYLTMTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00071.pdb 1 KSYNVTAVRFRKKKCDYATMTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00072.pdb 1 KSYNVTAVRFRKKKCDYATMTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00073.pdb 1 KSYNVTAVRFRKKKCDYATMTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00074.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00075.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00076.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00077.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00078.pdb 1 AEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYH-KSKWN-----ITMESYVVHTNYDEY 54 usage_00079.pdb 1 -------------KCNYRIWTFVPGSQPGEFTLG-NIKSW-PGL-TSWLVRVVSTNYNQH 44 usage_00084.pdb 1 NSYNVTSILVR---CRYWIRTFVPSSRAGQFTLG-NMHRY-PQV-QSYNVQVATTDYNQF 54 usage_00085.pdb 1 NSYNVTSILV----CRYWIRTFVPSSRAGQFTLG-NMHRY-PQV-QSYNVQVATTDYNQF 53 usage_00086.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00087.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00088.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00089.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00090.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 usage_00094.pdb 1 KSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLG-NIKSY-PGL-TSYLVRVVSTNYNQH 57 C p G ft V t Y usage_00004.pdb 58 AMVFFKKVQ-QNREYFSISLLGRTKELASELKENFIRFSKSLGLPENHIVF--- 107 usage_00005.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00006.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00007.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00009.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00010.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00011.pdb 53 ALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQ 106 usage_00013.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00019.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00020.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00022.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00023.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00024.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00025.pdb 55 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 107 usage_00026.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00028.pdb 58 AMVFFKKVS-QNREYFAITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00029.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00030.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00035.pdb 55 AMVFFKEVA-QNRETFNITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 107 usage_00036.pdb 54 AMVFFQKTS-ENKQYFKVTLYGRTKGLSDELKERFVSFAKSLGLKDNNIVFSVP 106 usage_00038.pdb 57 ALVLSLRQA-SNQNITRVSLLGRDWKITHKTIDRFIALTKTQNLTKNNLLFPDL 109 usage_00044.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00045.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00047.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKETSELKENFIRFSKSLGLPENHI-VFPVP 109 usage_00049.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00064.pdb 49 AVVFFKLAE----EFFAITIYGRTKELASELKENFIRFSKSLGLPENHIVFPVP 98 usage_00065.pdb 50 AVVFFKLAE----EFFAITIYGRTKELASELKENFIRFSKSLGLPENHIVFPVP 99 usage_00068.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00070.pdb 58 AMVFFKKVS-QNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVP 110 usage_00071.pdb 58 AMVFFKKVS-QNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVP 110 usage_00072.pdb 58 AMVFFKKVS-QNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVP 110 usage_00073.pdb 58 AMVFFKKVS-QNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVP 110 usage_00074.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00075.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00076.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00077.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00078.pdb 55 AIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSIFTMAD 108 usage_00079.pdb 45 AMVFFKRVY-QNRELFEITLYGRTKELTNELKENFIRFSKSLGLPENHIVFPVP 97 usage_00084.pdb 55 AMVFFRKTS-ENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDNIIFSVP 107 usage_00085.pdb 54 AMVFFRKTS-ENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDNIIFSV- 105 usage_00086.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00087.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00088.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00089.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00090.pdb 58 AMVFFKKVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 usage_00094.pdb 58 AMVFFKAVS-QNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVP 110 A gR f f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################