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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:44:51 2021
# Report_file: c_0227_1.html
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#====================================
# Aligned_structures: 12
#   1: usage_00004.pdb
#   2: usage_00007.pdb
#   3: usage_00008.pdb
#   4: usage_00011.pdb
#   5: usage_00013.pdb
#   6: usage_00014.pdb
#   7: usage_00016.pdb
#   8: usage_00019.pdb
#   9: usage_00022.pdb
#  10: usage_00025.pdb
#  11: usage_00027.pdb
#  12: usage_00028.pdb
#
# Length:        140
# Identity:       60/140 ( 42.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     83/140 ( 59.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           32/140 ( 22.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00007.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00008.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00011.pdb         1  QNGIHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVES   60
usage_00013.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00014.pdb         1  -------------------------GPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEA   35
usage_00016.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA   60
usage_00019.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00022.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA   60
usage_00025.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA   60
usage_00027.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
usage_00028.pdb         1  QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQA   60
                                                        KTdGV  Vq  N gaLl  IA QPVSvV  a

usage_00004.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00007.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00008.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00011.pdb        61  AGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKNSWGPGWGENGYIRIRRA  120
usage_00013.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00014.pdb        36  KGRAFQNYRGGIFAGPCGTSIDHAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRG   91
usage_00016.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00019.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00022.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00025.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00027.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
usage_00028.pdb        61  AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRG  116
                           aG dFQ YrGGIF GpCG kvDHAVaAVGYG      YILIKNSWGtGWGEnGYIRIkRg

usage_00004.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00007.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00008.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00011.pdb       121  SGNSPGVCGVYRSSYYP---  137
usage_00013.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00014.pdb        92  SGNPQGACGVLSDSVFP---  108
usage_00016.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00019.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00022.pdb       117  TGNSYGVCGLYTSSFYPVKN  136
usage_00025.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00027.pdb       117  TGNSYGVCGLYTSSFYP---  133
usage_00028.pdb       117  TGNSYGVCGLYTSSFYP---  133
                            GNs GvCG y sS yP   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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