################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:22 2021 # Report_file: c_1115_99.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00097.pdb # 2: usage_00176.pdb # 3: usage_00420.pdb # 4: usage_01181.pdb # 5: usage_01335.pdb # 6: usage_01562.pdb # 7: usage_01590.pdb # # Length: 75 # Identity: 4/ 75 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 75 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 75 ( 21.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00097.pdb 1 ----HELKEALETLKETGVRITPQRHAILEYLVNSM--AHPTADDIYKALEGKF--PNMS 52 usage_00176.pdb 1 ----DAYENVLEHLREKHIRITETRKAIISYMIQST--EHPSADKIYRDLQPNF--PNMS 52 usage_00420.pdb 1 ------LKEALETLKETGVRITPQRHAILEYLVNSM--AHPTADDIYKALEGKF--PNMS 50 usage_01181.pdb 1 -------SRIEQRLIDKGLKVTDQRRVIAQVLSDSA--DHPDVEEVYRRATAKD---PIS 48 usage_01335.pdb 1 VEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSD--THYTPESLYMEIKQAEPDLNVG 58 usage_01562.pdb 1 ---------NNQALKDAGLKVTLPRLKILEVLQQP-ECQHISAEELYKKLIDLG--EEIG 48 usage_01590.pdb 1 --LESILERLRMSIKKNGLKNSKQREEVVSVLYRSG--THLSPEEITHSIRQKD--KNTS 54 l g t R l s H y usage_00097.pdb 53 VATVYNNLRVFRESG 67 usage_00176.pdb 53 LATVYNNLKVLVDEG 67 usage_00420.pdb 51 VATVYNNLRVFRESG 65 usage_01181.pdb 49 IATVYRTVRLFEEES 63 usage_01335.pdb 59 IATVYRTLNLLEEAE 73 usage_01562.pdb 49 LATVYRVLNQFDDA- 62 usage_01590.pdb 55 ISSVYRILNFLEKEN 69 atVY l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################