################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:01:25 2021 # Report_file: c_0326_3.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00015.pdb # 4: usage_00016.pdb # # Length: 151 # Identity: 101/151 ( 66.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/151 ( 66.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/151 ( 22.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -PLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKS-DQQWKVLSKLKNGYQDSLFTSPEVAR 58 usage_00002.pdb 1 GPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKS-DQQWKVLSKLKNGYQDSLFTSPEVAR 59 usage_00015.pdb 1 ---------------------------------TDQQWRVLSKLKNGYQDSLFTSTEVAQ 27 usage_00016.pdb 1 ----------------------------------DQQWRVLSKLKNGYQDSLFTSTEVAQ 26 DQQW VLSKLKNGYQDSLFTS EVA usage_00001.pdb 59 NVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGK 118 usage_00002.pdb 60 NVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGK 119 usage_00015.pdb 28 NVAKPLVKYIDKTLVTEQAKAPKITLLVGHDSNIASLLTALDFKPYQLHDQQERTPIGGK 87 usage_00016.pdb 27 NVAKPLVKYIDKTLVTEQAKAPKITLLVGHDSNIASLLTALDFKPYQLHDQQERTPIGGK 86 NVAKPLV YIDK LVT APKIT LVGHDSNIASLLTALDFKPYQLHDQ ERTPIGGK usage_00001.pdb 119 IVFQRWHDSKANRDLMKIEYVYQSAEQLRNA 149 usage_00002.pdb 120 IVFQRWHDSKANRDLMKIEYVYQSAEQLRNA 150 usage_00015.pdb 88 IVFQRWHDKNANQELMKIEYVYQSSEQLRNA 118 usage_00016.pdb 87 IVFQRWHDKNANQELMKIEYVYQSSEQLRNA 117 IVFQRWHD AN LMKIEYVYQS EQLRNA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################