################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:11 2021 # Report_file: c_1095_14.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00020.pdb # 2: usage_00133.pdb # 3: usage_00494.pdb # 4: usage_00542.pdb # 5: usage_00573.pdb # 6: usage_00629.pdb # 7: usage_00639.pdb # # Length: 89 # Identity: 58/ 89 ( 65.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/ 89 ( 83.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 89 ( 9.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 -FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 59 usage_00133.pdb 1 -FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 59 usage_00494.pdb 1 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 60 usage_00542.pdb 1 -FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 59 usage_00573.pdb 1 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLV 60 usage_00629.pdb 1 ----DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 56 usage_00639.pdb 1 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 60 DVYafGIVLYELMTGqLPYSnINNRDQII MVGRG lSPDLSKvrsNCPK MKRLm usage_00020.pdb 60 AECLKKKRDERPLFPQILASIELLARSL- 87 usage_00133.pdb 60 AECLKKKRDERPLFPQILASIELLARSL- 87 usage_00494.pdb 61 AECLKKKRDERPSFPRILAEIEELA---- 85 usage_00542.pdb 60 AECLKKKRDERPSFPRILAEIEELARE-- 86 usage_00573.pdb 61 ADCVKKVKEERPLFPQILSSIELLQHSLP 89 usage_00629.pdb 57 AECLKKKRDERPLFPQILASIELLARSL- 84 usage_00639.pdb 61 AECLKKKRDERPLFPQILASIELLARS-- 87 AeClKKkrdERP FP ILa IE La #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################