################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:45:17 2021 # Report_file: c_0162_16.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00008.pdb # 4: usage_00102.pdb # 5: usage_00103.pdb # 6: usage_00104.pdb # 7: usage_00136.pdb # 8: usage_00137.pdb # 9: usage_00138.pdb # 10: usage_00139.pdb # 11: usage_00140.pdb # 12: usage_00174.pdb # 13: usage_00175.pdb # 14: usage_00176.pdb # 15: usage_00177.pdb # 16: usage_00239.pdb # 17: usage_00240.pdb # 18: usage_00241.pdb # 19: usage_00242.pdb # 20: usage_00351.pdb # 21: usage_00456.pdb # 22: usage_00457.pdb # 23: usage_00467.pdb # 24: usage_00468.pdb # 25: usage_00469.pdb # 26: usage_00482.pdb # 27: usage_00483.pdb # 28: usage_00576.pdb # # Length: 142 # Identity: 119/142 ( 83.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 119/142 ( 83.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/142 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 -GVVYKGYVNNTTVAVKKL-----------LKQQFDQEIKV-AKCQHENLVELLGFSSDG 47 usage_00002.pdb 1 -GVVYKGYVNNTTVAVKKL------------KQQFDQEIKV-AKCQHENLVELLGFSSDG 46 usage_00008.pdb 1 -GVVYKGYVNNTTVAVKKL------------KQQFDQEIKVMAKCQHENLVELLGFSSDG 47 usage_00102.pdb 1 -GVVYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 58 usage_00103.pdb 1 -GVVYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 58 usage_00104.pdb 1 -GVVYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 58 usage_00136.pdb 1 -GVVYKGYVNNTTVAVKKL-AA---ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 55 usage_00137.pdb 1 -GVVYKGYVNNTTVAVKKL-AI----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 54 usage_00138.pdb 1 -GVVYKGYVNNTTVAVKKL-A-----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 53 usage_00139.pdb 1 -GVVYKGYVNNTTVAVKKL-AA---ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 55 usage_00140.pdb 1 -GVVYKGYVNNTTVAVKKL-AA----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 54 usage_00174.pdb 1 -GVVYKGYVNNTTVAVKKLI------TTEELKQQFDQEIKVMAKCQHENLVELLGFSSD- 52 usage_00175.pdb 1 -GVVYKGYVNNTTVAVKKL-A-----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 53 usage_00176.pdb 1 --VVYKGYVNNTTVAVKKLI------TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 52 usage_00177.pdb 1 -GVVYKGYVNNTTVAVKKL-AA----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 54 usage_00239.pdb 1 --VVYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 57 usage_00240.pdb 1 --VVYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 57 usage_00241.pdb 1 -GVVYKGYVNNTTVAVKKL-AA---ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 55 usage_00242.pdb 1 -GVVYKGYVNNTTVAVKKL-----------LKQQFDQEIKVMAKCQHENLVELLGFSSDG 48 usage_00351.pdb 1 --VVYKGYVNNTTVAVKKL-AI----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 53 usage_00456.pdb 1 -GVVYKGYVNNTTVAVKKL-AA---ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 55 usage_00457.pdb 1 -GVVYKGYVNNTTVAVKKL-A-----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 53 usage_00467.pdb 1 -GVVYKGYVNNTTVAVKK--------TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 51 usage_00468.pdb 1 -GVVYKGYVNNTTVAVKKL-A------TEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 52 usage_00469.pdb 1 -GVVYKGYVNNTTVAVKKL-------TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 52 usage_00482.pdb 1 FGVVYKGYVNNTTVAVKKL-A-----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 54 usage_00483.pdb 1 -GVVYKGYVNNTTVAVKKL-A------AEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 52 usage_00576.pdb 1 -GVVYKGYVNNTTVAVKKL-AA----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 54 VVYKGYVNNTTVAVKK KQQFDQEIKV AKCQHENLVELLGFSSD usage_00001.pdb 48 DDLCLVYVY-PNGSLLDRLSCLDGTPPLSWH-RCKIAQGAANGINFLHENHHIHRDIKSA 105 usage_00002.pdb 47 DDLCLVYVY-PNGSLLDRLSCLDGTPPLSWH-RCKIAQGAANGINFLHENHHIHRDIKSA 104 usage_00008.pdb 48 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 107 usage_00102.pdb 59 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 118 usage_00103.pdb 59 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 118 usage_00104.pdb 59 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 118 usage_00136.pdb 56 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 115 usage_00137.pdb 55 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 114 usage_00138.pdb 54 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 113 usage_00139.pdb 56 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 115 usage_00140.pdb 55 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 114 usage_00174.pdb 53 --LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 110 usage_00175.pdb 54 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 113 usage_00176.pdb 53 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 112 usage_00177.pdb 55 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 114 usage_00239.pdb 58 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 117 usage_00240.pdb 58 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 117 usage_00241.pdb 56 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 115 usage_00242.pdb 49 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 108 usage_00351.pdb 54 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 113 usage_00456.pdb 56 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 115 usage_00457.pdb 54 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 113 usage_00467.pdb 52 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 111 usage_00468.pdb 53 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 112 usage_00469.pdb 53 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 112 usage_00482.pdb 55 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 114 usage_00483.pdb 53 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 112 usage_00576.pdb 55 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA 114 LCLVYVY PNGSLLDRLSCLDGTPPLSWH RCKIAQGAANGINFLHENHHIHRDIKSA usage_00001.pdb 106 NILLDEAFTAKISDFGLARAS- 126 usage_00002.pdb 105 NILLDEAFTAKISDFGLARAS- 125 usage_00008.pdb 108 NILLDEAFTAKISDFGLARA-- 127 usage_00102.pdb 119 NILLDEAFTAKISDFGLARAS- 139 usage_00103.pdb 119 NILLDEAFTAKISDFGLARAS- 139 usage_00104.pdb 119 NILLDEAFTAKISDFGLARAS- 139 usage_00136.pdb 116 NILLDEAFTAKISDFGLARAS- 136 usage_00137.pdb 115 NILLDEAFTAKISDFGLARAS- 135 usage_00138.pdb 114 NILLDEAFTAKISDFGLARAS- 134 usage_00139.pdb 116 NILLDEAFTAKISDFGLARAS- 136 usage_00140.pdb 115 NILLDEAFTAKISDFGLARAS- 135 usage_00174.pdb 111 NILLDEAFTAKISDFGLARAS- 131 usage_00175.pdb 114 NILLDEAFTAKISDFGLARAS- 134 usage_00176.pdb 113 NILLDEAFTAKISDFGLARAS- 133 usage_00177.pdb 115 NILLDEAFTAKISDFGLARAS- 135 usage_00239.pdb 118 NILLDEAFTAKISDFGLARASE 139 usage_00240.pdb 118 NILLDEAFTAKISDFGLARASE 139 usage_00241.pdb 116 NILLDEAFTAKISDFGLARAS- 136 usage_00242.pdb 109 NILLDEAFTAKISDFGLARAS- 129 usage_00351.pdb 114 NILLDEAFTAKISDFGLARA-- 133 usage_00456.pdb 116 NILLDEAFTAKISDFGLARAS- 136 usage_00457.pdb 114 NILLDEAFTAKISDFGLARAS- 134 usage_00467.pdb 112 NILLDEAFTAKISDFGLARASE 133 usage_00468.pdb 113 NILLDEAFTAKISDFGLARAS- 133 usage_00469.pdb 113 NILLDEAFTAKISDFGLARASE 134 usage_00482.pdb 115 NILLDEAFTAKISDFGLARAS- 135 usage_00483.pdb 113 NILLDEAFTAKISDFGLARAS- 133 usage_00576.pdb 115 NILLDEAFTAKISDFGLARAS- 135 NILLDEAFTAKISDFGLARA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################