################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:17:45 2021 # Report_file: c_0781_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00013.pdb # 2: usage_00021.pdb # 3: usage_00022.pdb # 4: usage_00023.pdb # 5: usage_00123.pdb # 6: usage_00124.pdb # 7: usage_00267.pdb # 8: usage_00287.pdb # 9: usage_00307.pdb # 10: usage_00409.pdb # # Length: 99 # Identity: 4/ 99 ( 4.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 99 ( 14.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 99 ( 50.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 YVTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 51 usage_00021.pdb 1 -VTLTYAQSLDARVSRG-----------HP----ETKTMTHYLRHHHDGILVGSGTVL-- 42 usage_00022.pdb 1 YVTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 51 usage_00023.pdb 1 -VTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 50 usage_00123.pdb 1 -VTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 50 usage_00124.pdb 1 -VTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 50 usage_00267.pdb 1 YVRLKVASSLDGRTAMASGES---IT--GS----AARQDVQHWRAISGAVITGIDTVI-- 49 usage_00287.pdb 1 YIQLKLGASLDGRT---------WIT--SP----QARRDVQLLRAQSHAILTSSATVL-- 43 usage_00307.pdb 1 -NIVFIATSLDGYIADKRGKLDW-LHSVPNPNNV--DTGFVA-LERVDGLV-GRNTLDVL 54 usage_00409.pdb 1 -VTLKAAASLDGKIATSTGDSKW-IT--SE----AARQDAQQYRKTHQSILVGVGTVK-- 50 l a SLDg r g Tv usage_00013.pdb 52 ADNPS-LTCRL-PN-----------V-TKQPVRVILDTV 76 usage_00021.pdb 43 ADNPG-LNC-------------------NSPRPIII--- 58 usage_00022.pdb 52 ADNPS-LTCRL-PN-----------V-TKQPVRVILDT- 75 usage_00023.pdb 51 ADNPS-LTCRL-PN-----------V-TKQPVRVIL--- 72 usage_00123.pdb 51 ADNPS-LTCRL-PN-----------V-TKQPVRVIL--- 72 usage_00124.pdb 51 ADNPS-LTCRL-PN-----------V-TKQPVRVILDTV 75 usage_00267.pdb 50 ADDCQ-LNVRSLHN--------IDIETVAQPKRVIL--- 76 usage_00287.pdb 44 ADDPA-LTVRW-SELDEQTQALYPQQNLRQPIRIVI--- 77 usage_00307.pdb 55 SFDCDWPY---------------------SKPVFVLS-- 70 usage_00409.pdb 51 ADNPS-LTCRL-PN-----------V-TKQPVRVIL--- 72 ad l p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################