################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:59:03 2021 # Report_file: c_1175_9.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00120.pdb # 2: usage_00126.pdb # 3: usage_00382.pdb # 4: usage_00395.pdb # 5: usage_00661.pdb # 6: usage_00662.pdb # 7: usage_00807.pdb # 8: usage_01123.pdb # 9: usage_01209.pdb # 10: usage_01210.pdb # 11: usage_01211.pdb # 12: usage_01212.pdb # 13: usage_01213.pdb # # Length: 42 # Identity: 5/ 42 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 42 ( 23.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 42 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00120.pdb 1 -YKKRWRDHRG------YRTERGCG--CPSVKNGIEINCC-- 31 usage_00126.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_00382.pdb 1 CYTKTWCDAFCSQR--GKRVELGCAATCPKVKAGVEIKCCS- 39 usage_00395.pdb 1 CYTLYRPDGNG---EMKW-AVKGCAKTCPTAQPGESVQCCN- 37 usage_00661.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_00662.pdb 1 -YTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 38 usage_00807.pdb 1 CFKRWQYISPR-----MYDFTRGCAATCPKPTNVRETIRCCG 37 usage_01123.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_01209.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_01210.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_01211.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_01212.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 usage_01213.pdb 1 CYTKTWCDAFCSIR--GKRVDLGCAATCPTVKTGVDIQCCS- 39 y d GCa CP g cC #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################