################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:01 2021 # Report_file: c_1024_29.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00010.pdb # 2: usage_00031.pdb # 3: usage_00144.pdb # 4: usage_00256.pdb # 5: usage_00257.pdb # 6: usage_00258.pdb # 7: usage_00259.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 62 ( 1.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 62 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 -KLVIWING-D--KGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKF-------------- 42 usage_00031.pdb 1 --NQLTMWV-DGDKQMAFYKKITDQYTKKTGIKVKLVNIGQN----DQ------------ 41 usage_00144.pdb 1 ----ITVWTHFGGPELEWLKEQARTFERTSGTKVEVVEVPFA----EI---KQKFILG-- 47 usage_00256.pdb 1 --LVVWENA-DDGVQLNNTKKWAGEFTKKTGIQVEVVPVALL----KQ------------ 41 usage_00257.pdb 1 --LVVWENA-DDGVQLNNTKKWAGEFTKKTGIQVEVVPVALL----KQ------------ 41 usage_00258.pdb 1 DKLVVWENA-DDGVQLNNTKKWAGEFTKKTGIQVEVVPVALL----KQ------------ 43 usage_00259.pdb 1 ---DITVVA-R---NSDKAARLVDLGTRVG-VATRFCAFD--------SGGLADA---VA 41 v usage_00010.pdb -- usage_00031.pdb -- usage_00144.pdb -- usage_00256.pdb -- usage_00257.pdb -- usage_00258.pdb -- usage_00259.pdb 42 AA 43 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################