################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:56 2021 # Report_file: c_1462_75.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00546.pdb # 2: usage_00676.pdb # 3: usage_00677.pdb # 4: usage_00678.pdb # 5: usage_00680.pdb # 6: usage_00681.pdb # 7: usage_01346.pdb # 8: usage_01887.pdb # 9: usage_02227.pdb # 10: usage_02449.pdb # # Length: 43 # Identity: 0/ 43 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 43 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/ 43 ( 67.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00546.pdb 1 --------LRYFTTE--R--FL-------PLLRMRLDDP---- 20 usage_00676.pdb 1 -I-AGFRFSLYPM-T-DD--FI-------SVIKSALKKT---- 26 usage_00677.pdb 1 RI-AGFRFSLYPM-T-DD--FI-------SVIKSALKKT---- 27 usage_00678.pdb 1 RI-AGFRFSLYPM-T-DD--FI-------SVIKSALKKT---- 27 usage_00680.pdb 1 ---IAGFRFSLYP-T-DD--FI-------SVIKSALAAT---- 25 usage_00681.pdb 1 ---IAGFRFSLYP-T-DD--FI-------SVIKSALAAT---- 25 usage_01346.pdb 1 --ADYRALMF-NL-DNEFLKDL-------KVRQALNYA----- 27 usage_01887.pdb 1 -------AGIRFP-K--N--RI-------DEFIKLFNEAL--- 21 usage_02227.pdb 1 -------FVFRVE-K-EE--ER-------NDWISILLNALKSQ 25 usage_02449.pdb 1 -------YQQCRF-S-------YSPDSRVIEIADTFRLKR--- 25 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################