################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:28 2021 # Report_file: c_0655_21.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00159.pdb # # Length: 119 # Identity: 38/119 ( 31.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/119 ( 78.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/119 ( 21.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 FDSEITLVPCISALS---QDIGHITMQYMYVPPGAPVPNSRDDYAWQSGTNASVFWQHGQ 57 usage_00080.pdb 1 ---EITLVPCISALS---QDIGHITMQYMYVPPGAPVPNSRDDYAWQSGTNASVFWQHGQ 54 usage_00159.pdb 1 -------VVTANFTETNNGHALNQVYQIMYVPPGAPVPEKWDDYTWQTSSNPSIFYTYGT 53 Vpcisals qdighitmQyMYVPPGAPVPnsrDDYaWQsgtNaSvFwqhGq usage_00079.pdb 58 AYPRFSLPFLSVASAYYMFYDGYDE----------QDQNYGTANTN--NMGSLCSRI-- 102 usage_00080.pdb 55 AYPRFSLPFLSVASAYYMFYDGYDE----------QDQNYGTANTN--NMGSLCSRIVT 101 usage_00159.pdb 54 APARISVPYVGISNAYSHFYDGFSKVPLKDQSAALGDSLYGAAS--LNDFGILAVRV-- 108 AypRfSlPflsvasAYymFYDGyde qDqnYGtAn nmGsLcsRi #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################