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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 23:04:32 2021
# Report_file: c_1396_80.html
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#====================================
# Aligned_structures: 7
#   1: usage_00830.pdb
#   2: usage_01006.pdb
#   3: usage_01008.pdb
#   4: usage_01230.pdb
#   5: usage_01242.pdb
#   6: usage_01323.pdb
#   7: usage_01393.pdb
#
# Length:        116
# Identity:       25/116 ( 21.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/116 ( 45.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           32/116 ( 27.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00830.pdb         1  GARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALA   60
usage_01006.pdb         1  --------GLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV   52
usage_01008.pdb         1  ------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV   54
usage_01230.pdb         1  ---SASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALA   57
usage_01242.pdb         1  -------EWVLIA---GYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLV   50
usage_01323.pdb         1  -------MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA   53
usage_01393.pdb         1  ---SASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKLKTATNIYIFNLALADALA   57
                                           lY  Vc  gL GN LVm  i r tkmkTaTNiyIfNLaLAD L 

usage_00830.pdb        61  TS-TLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCH-  114
usage_01006.pdb        53  LL-TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP  107
usage_01008.pdb        55  LL-TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICH-  108
usage_01230.pdb        58  TS-TLPFQSAKYLMETWPFGELLCKAVLSIDYYNMF--------------------   92
usage_01242.pdb        51  TITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHP  106
usage_01323.pdb        54  TS-TLPFQSVNYLMGTWPFGNILCKIVISIDYYNMF--------------------   88
usage_01393.pdb        58  TS-TLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHP  112
                              tLPfq    l   WpFG  LCK v  idyynmf                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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