################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:04:17 2021 # Report_file: c_1383_20.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00157.pdb # 2: usage_00194.pdb # 3: usage_00251.pdb # 4: usage_00272.pdb # 5: usage_00785.pdb # 6: usage_00948.pdb # 7: usage_00949.pdb # 8: usage_00950.pdb # 9: usage_01149.pdb # 10: usage_01163.pdb # 11: usage_01211.pdb # 12: usage_01296.pdb # 13: usage_01452.pdb # # Length: 77 # Identity: 1/ 77 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 77 ( 13.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 77 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00157.pdb 1 I---------PALAG------K-V-LRFQKAFLTQLDELLTEHRMTW----DPAQPP-R- 37 usage_00194.pdb 1 -PWLQLYNNFPSFLHYL----P-GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNC-P-R- 51 usage_00251.pdb 1 ---------FSGFLKYF----P-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSN-P-R- 43 usage_00272.pdb 1 ---------FSGFLKYF----P-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSN-P-R- 43 usage_00785.pdb 1 ------------LIDC-----FPGTHNKVLKNVALTRSYIREKVKEHQASLDVNN-P-R- 40 usage_00948.pdb 1 ---------FSGFMKYF----P-GAHRQITRNLQEILDYVGQSVEKHRATLDPSN-P-R- 43 usage_00949.pdb 1 ---------FSGFMKYF----P-GAHRQITRNLQEILDYVGQSVEKHRATLDPSN-P-R- 43 usage_00950.pdb 1 ---------FSGFMKYF----P-GAHRQITRNLQEILDYVGQSVEKHRATLDPSN-P-R- 43 usage_01149.pdb 1 -PWLQLYNNFPSFLHYL----P-GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNC-P-R- 51 usage_01163.pdb 1 ----------MPWLQYFPNPVR-TVFREFEQLNRNFSNFILDKFLRHCESLRPGA-APRD 48 usage_01211.pdb 1 ---------FSGFLKHF----P-GAHRQVYKNLQEINAYIGHSVEKHRETLDPSA-P-R- 43 usage_01296.pdb 1 ----------SGFLKYF----P-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSN-P-R- 42 usage_01452.pdb 1 ---------FSGFLKHF----P-GAHRQVYKNLQEINAYIGHSVEKHRETLDPSA-P-R- 43 r h dp p R usage_00157.pdb 38 ---DLTEAFLAEMEKAK 51 usage_00194.pdb 52 ---DLTDCLLVEMEKEK 65 usage_00251.pdb 44 ---DFIDVYLLRMEKD- 56 usage_00272.pdb 44 ---DFIDVYLLRMEKD- 56 usage_00785.pdb 41 ---DFIDCFLIKMEQEK 54 usage_00948.pdb 44 ---DFIDTYLLRMEKE- 56 usage_00949.pdb 44 ---DFIDTYLLRMEKE- 56 usage_00950.pdb 44 ---DFIDTYLLRMEKE- 56 usage_01149.pdb 52 ---DLTDCLLVEMEK-- 63 usage_01163.pdb 49 MMDAFILSAEKKAA--- 62 usage_01211.pdb 44 ---DLIDTYLLHMEKE- 56 usage_01296.pdb 43 ---DFIDVYLLRMEKDK 56 usage_01452.pdb 44 ---DLIDTYLLHMEKE- 56 d l me #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################