################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:07:09 2021 # Report_file: c_0337_12.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00005.pdb # 2: usage_00029.pdb # 3: usage_00030.pdb # 4: usage_00031.pdb # 5: usage_00063.pdb # 6: usage_00076.pdb # 7: usage_00094.pdb # 8: usage_00190.pdb # 9: usage_00192.pdb # # Length: 101 # Identity: 15/101 ( 14.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/101 ( 27.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/101 ( 19.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 KPTLWAEPGSVIIQGSPVTLRCQGSLQAEEYHLYRENKSASWVRRIQEP----G-KNGQF 55 usage_00029.pdb 1 KPSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDTLHLI-GEHH-DGVSKANF 58 usage_00030.pdb 1 -PSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDTLHLI-GEHH-DGVSKANF 57 usage_00031.pdb 1 -PSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDTLHLI-GEHH-DGVSKANF 57 usage_00063.pdb 1 -PSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGE-AHERRLP-AGPKVNGTFQADF 57 usage_00076.pdb 1 -PSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLV-GQIH-DGVSKANF 57 usage_00094.pdb 1 -PSLLAHPGPLVKSEETVILQCWSDVRFEHFLLHREGKYKDTLHLI-GEHH-DGVSKANF 57 usage_00190.pdb 1 -PSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDTLHLI-GEHH-DGVSKANF 57 usage_00192.pdb 1 -PTLSAQPSPVVTSGGRVTLQCESQVAFGGFILCKEEH-PQCLNSQ-------S-SRAIF 50 P L A Pg v V L C s L E g a F usage_00005.pdb 56 PIPSITWEHA-GRYHCQYYSH---NHSSEYSDPLELVVTG- 91 usage_00029.pdb 59 SIGPMMQDLA-GTYRCYGSVTHSPYQLSAPSDPLDIV---- 94 usage_00030.pdb 58 SIGPMMQDLA-GTYRCYGSVTHSPYQLSAPSDPLDIV---- 93 usage_00031.pdb 58 SIGPMMQDLA-GTYRCYGSVTHSPYQLSAPSDPLDIVITG- 96 usage_00063.pdb 58 PLGPATH--G-GTYRCFGSFHDSPYEWSKSSDPLLVSV--- 92 usage_00076.pdb 58 SIGPMMLALA-GTYRCYGSVTHTPYQLSAPSDPLDIVVTGP 97 usage_00094.pdb 58 SIGPMMQDLA-GTYRCYGSVTHSPYQLSAPSDPLDIVITG- 96 usage_00190.pdb 58 SIGPMMQDLA-GTYRCYGSVTHSPYQLSAPSDPLDIVITG- 96 usage_00192.pdb 51 SVGPVSPN-RRWSHRCYGYDLNSPYVWSSPSDLLELLV--- 87 gp g yrC g y S SDpL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################