################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:13:22 2021 # Report_file: c_1383_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00494.pdb # 2: usage_00712.pdb # 3: usage_00713.pdb # 4: usage_00857.pdb # 5: usage_01363.pdb # # Length: 71 # Identity: 13/ 71 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 71 ( 66.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 71 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00494.pdb 1 TSDDQIVLLKSSAIEVIMLRSNQSFTMD-------SQDYKYDVTDVSKAGHTLE-LIEPL 52 usage_00712.pdb 1 TSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLE-LIEPL 59 usage_00713.pdb 1 TSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLE-LIEPL 59 usage_00857.pdb 1 -REDQIALLKACSSEVMMLRMARRYDVG-----------SDSI----------LATVDDL 38 usage_01363.pdb 1 TSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLE-LIEPL 59 sdDQIvLLKssaiEViMLRsnqsftmd kydv e liepL usage_00494.pdb 53 IKFQVGLKKL- 62 usage_00712.pdb 60 IKFQVGLKKL- 69 usage_00713.pdb 60 IKFQVGLKKL- 69 usage_00857.pdb 39 LRFCRQMYGMK 49 usage_01363.pdb 60 IKFQVGLKKL- 69 ikFqvglkkl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################