################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:12:56 2021 # Report_file: c_1261_236.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00227.pdb # 2: usage_00228.pdb # 3: usage_00229.pdb # 4: usage_00230.pdb # 5: usage_00231.pdb # 6: usage_00490.pdb # 7: usage_02433.pdb # 8: usage_03875.pdb # 9: usage_03876.pdb # # Length: 36 # Identity: 4/ 36 ( 11.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 36 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 36 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00227.pdb 1 LAVAGDSAGATLSAAVSIYAKEKGLS-AAIKTQVLI 35 usage_00228.pdb 1 LAVAGDSAGATLSAAVSIYAKEKGLS-AAIKTQVLI 35 usage_00229.pdb 1 LVVAGDSAGGNLSAVVCIRAKQLGLN-IIKGQVLI- 34 usage_00230.pdb 1 LVVAGDSAGGNLSAVVCIRAKQLGLN-IIKGQVLI- 34 usage_00231.pdb 1 LVVAGDSAGGNLSAVVCIRAKQLGLN-IIKGQVLI- 34 usage_00490.pdb 1 IAVAGDSAGGNLAAVVSILDRNSGEK-LVKKQVLI- 34 usage_02433.pdb 1 IAVAGDSAGGNLAAVTAIMARDRGES-FVKYQVLI- 34 usage_03875.pdb 1 LAVGGDSAGGAMAAVVCQACRDAGET-GPAFQMLI- 34 usage_03876.pdb 1 LT-IGGEAGGHLAAVTLLRMRDRHGFTGFAGANLV- 34 GdsAG l A g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################