################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:21 2021 # Report_file: c_0676_12.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00020.pdb # 4: usage_00042.pdb # 5: usage_00069.pdb # 6: usage_00070.pdb # 7: usage_00089.pdb # 8: usage_00183.pdb # # Length: 72 # Identity: 7/ 72 ( 9.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 72 ( 22.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 72 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 EFVTVG---AHKTGVVRYVGPAD-----F-QEGTWVGVELD---LPSGKNDGSIGGKQYF 48 usage_00019.pdb 1 DRVLVG---GTKTGVVRYVGETD-----F-AKGEWCGVELD---EPLGKNDGAVAGTRYF 48 usage_00020.pdb 1 ERVWVN---GNKPGFIQFLGETQ-----F-APGQWAGIVLD---EPIGKNDGSVAGVRYF 48 usage_00042.pdb 1 -EVTVG-AQMARRGEVAYVGATK-----F-KEGVWVGVKYD---EPVGKNDGSVAGVRYF 49 usage_00069.pdb 1 CEVRAP-DHSLRRGTVMYVGLTD-----F-KPGYWVGVRYD---EPLGKNDGSVNGKRYF 50 usage_00070.pdb 1 VSLKVG--ETIESGTVIFCDVLPGKES----LGYFVGVDMD---NPIGNWDGRFDGVQLC 51 usage_00089.pdb 1 CEVTVG-AQMARRGEVAYVGATK-----F-KEGVWVGVKYD---EPVGKNDGSVAGVRYF 50 usage_00183.pdb 1 VKVQLRSGEEKFPGVVRFRGPLLA---ERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLF 57 v G v g G Gv d p G DG G f usage_00018.pdb 49 R-CNPGYGLLVR 59 usage_00019.pdb 49 Q-CPPKFGLFAP 59 usage_00020.pdb 49 Q-CEPLKGIFT- 58 usage_00042.pdb 50 D-CDPKYGGFV- 59 usage_00069.pdb 51 E-CQAKYGAFVK 61 usage_00070.pdb 52 SFACVESTILL- 62 usage_00089.pdb 51 D-CDPKYGGFV- 60 usage_00183.pdb 58 Q-CDEDCGVFVA 68 c g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################