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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:56:48 2021
# Report_file: c_0210_5.html
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#====================================
# Aligned_structures: 13
#   1: usage_00006.pdb
#   2: usage_00007.pdb
#   3: usage_00009.pdb
#   4: usage_00012.pdb
#   5: usage_00020.pdb
#   6: usage_00021.pdb
#   7: usage_00022.pdb
#   8: usage_00027.pdb
#   9: usage_00028.pdb
#  10: usage_00029.pdb
#  11: usage_00036.pdb
#  12: usage_00037.pdb
#  13: usage_00038.pdb
#
# Length:        115
# Identity:       27/115 ( 23.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     33/115 ( 28.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           13/115 ( 11.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00006.pdb         1  -IVLTQSPATLSLSPGERATLSCGASQS-VS-S----N--YLAWYQQKPGQAPRLLIYDA   51
usage_00007.pdb         1  --VLTQSPATLSLSPGERATLSCGASQS-VS-S----N--YLAWYQQKPGQAPRLLIYDA   50
usage_00009.pdb         1  DIQMTQSPSSLSASVGDRVTITCRASQD-VS------T--AVAWYQQKPGKAPKLLIYSA   51
usage_00012.pdb         1  -IVLTQSHKFMSTSVGDRVSITCKASQD-VG------T--AVAWYQQKPGQSPKLLIYWA   50
usage_00020.pdb         1  DIVMTQSPDSLAVSLGERATINCKSSQS-VLYSSNSKN--YLAWYQQKPGQPPKLLIYWA   57
usage_00021.pdb         1  DIVLTQSPATLSLSPGERATLSCRASQS-VS-S----S--YLAWYQQKPGQAPRLLIYGA   52
usage_00022.pdb         1  -IVLTQSPATLSLSPGERATLSCRASQS-VS-S----S--YLAWYQQKPGQAPRLLIYGA   51
usage_00027.pdb         1  ALQLTQSPSSLSASVGDRITITCRASQG-VT------S--ALAWYRQKPGSPPQLLIYDA   51
usage_00028.pdb         1  -IQMTQSPSSLSASVGDRVTITCRASQS-VS------S--AVAWYQQKPGKAPKLLIYSA   50
usage_00029.pdb         1  DIQMTQSPSSLSASVGDRVTITCRASQS-VS------S--AVAWYQQKPGKAPKLLIYSA   51
usage_00036.pdb         1  -TTLTQSPGTLSLSPGERATLSCRASQT-IS-N----N--FVAWYQQKPGQAPRLLIYGA   51
usage_00037.pdb         1  QA-VVTQESALTSSPGETVTLTCRSSTGAVT------TSNYANWVQEKPDHLFTGVIGGT   53
usage_00038.pdb         1  QA-VVTQESALTSSPGETVTLTCRSSTGAVT------TSNYANWVQEKPDHLFTGVIGGT   53
                                     l  S G   t  C  S   v             W q KP       I   

usage_00006.pdb        52  SSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEI  106
usage_00007.pdb        51  SSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVE-  104
usage_00009.pdb        52  SFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEI  106
usage_00012.pdb        51  STRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLE-  104
usage_00020.pdb        58  STRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYSFGQGTKLEI  112
usage_00021.pdb        53  SSRATGVPARFSGSGSGTDFTLTISSLEPEDFATYYCLQIYNMPITFGQGTKVEI  107
usage_00022.pdb        52  SSRATGVPARFSGSGSGTDFTLTISSLEPEDFATYYCLQIYNMPITFGQGTKVEI  106
usage_00027.pdb        52  SSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDV  106
usage_00028.pdb        51  SSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSQWYPITFGQGTKVEI  105
usage_00029.pdb        52  SSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSQWYPITFGQGTKVEI  106
usage_00036.pdb        52  STRATGIPDRFSGSGSGTDFTLTISSLEPEDFAVYYCQQYGSSPYTFGQGTKVDI  106
usage_00037.pdb        54  NNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLT-  107
usage_00038.pdb        54  NNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLT-  107
                                G P RFsGS  G    LTI     ED A Y C         FG GTk   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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