################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:29:10 2021 # Report_file: c_1460_71.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00285.pdb # 2: usage_00535.pdb # 3: usage_00565.pdb # 4: usage_00566.pdb # 5: usage_01016.pdb # 6: usage_01216.pdb # 7: usage_01218.pdb # 8: usage_01678.pdb # 9: usage_01694.pdb # 10: usage_01852.pdb # 11: usage_01972.pdb # 12: usage_02013.pdb # 13: usage_02171.pdb # 14: usage_02172.pdb # 15: usage_02173.pdb # # Length: 30 # Identity: 0/ 30 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 30 ( 23.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 30 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00285.pdb 1 --------LEAKFEEASLFKRIIDG----- 17 usage_00535.pdb 1 -------MLEAKFEEASLFKRIIDG----- 18 usage_00565.pdb 1 --------LEAKFEEASLFKRIIDGFKDC- 21 usage_00566.pdb 1 --------LEAKFEEASLFKRIIDG----- 17 usage_01016.pdb 1 DEHPRFKN-KP--VPDQIINFYKSN----- 22 usage_01216.pdb 1 -------MLEAKFEEASLFKRIIDGFKDC- 22 usage_01218.pdb 1 -------MLEAKFEEASLFKRIIDGFKDC- 22 usage_01678.pdb 1 -------AFHAKFKEAALFKRVVESLKST- 22 usage_01694.pdb 1 -------MLEAKFEEASLFKRIIDG----- 18 usage_01852.pdb 1 -------MLEAKFEEASLFKRIIDG----- 18 usage_01972.pdb 1 -------MLEAKFEEASLFKRIIDGFKDC- 22 usage_02013.pdb 1 -------MLEAKFEEASLFKRIIDGFK--- 20 usage_02171.pdb 1 --------LEAKFEEASLFKRIIDGFKDCV 22 usage_02172.pdb 1 --------LEAKFEEASLFKRIIDGF---- 18 usage_02173.pdb 1 ---------EAKFEEASLFKRIIDG----- 16 a ea lfkr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################