################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:37 2021 # Report_file: c_1279_76.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00115.pdb # 2: usage_00185.pdb # 3: usage_00186.pdb # 4: usage_00585.pdb # 5: usage_00597.pdb # 6: usage_00826.pdb # 7: usage_01016.pdb # 8: usage_01026.pdb # # Length: 40 # Identity: 0/ 40 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 40 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 26/ 40 ( 65.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 --DVVEFH-S-L-------WNL-PPALQIAEA---LREYE 25 usage_00185.pdb 1 -A--LAYF-D-L-------DLY-EPTKAVLEA---IRPYL 24 usage_00186.pdb 1 -A--LAYF-D-L-------DLY-EPTKAVLEA---IRPYL 24 usage_00585.pdb 1 -----ELV-N-W-DLSLFYLDE--RSYQRAVITNR----- 25 usage_00597.pdb 1 EV--RFSA-E-DT----FRSEE-QDLLAVYEA---VAPYV 28 usage_00826.pdb 1 -D-IMVEFHSMW--------QL-LPAMQIAKA---LTPYQ 26 usage_01016.pdb 1 ---RVLYC-G-D-TS----LET--AAGYLAGL---TSWQ- 24 usage_01026.pdb 1 -G--WYHT-G-P-------K-LHKNDIAINEL---MKRYC 24 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################