################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:58:53 2021 # Report_file: c_0004_22.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00302.pdb # 2: usage_00469.pdb # 3: usage_00470.pdb # # Length: 305 # Identity: 211/305 ( 69.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 211/305 ( 69.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 94/305 ( 30.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 LGCVAYPSPIHPDYHAGPASTIAFDNQDELLWIGTQKGFAGSFIGRELKRFTAFRIHPET 60 usage_00469.pdb 1 --------------------------------------------------FTAFRIHPET 10 usage_00470.pdb 1 --------------------------------------------------FTAFRIHPET 10 FTAFRIHPET usage_00302.pdb 61 DGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKGTSEILVAG 120 usage_00469.pdb 11 DGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKGTSEILVAG 70 usage_00470.pdb 11 DGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKGTSEILVAG 70 DGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKGTSEILVAG usage_00302.pdb 121 WQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAH 180 usage_00469.pdb 71 WQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAH 130 usage_00470.pdb 71 WQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAH 130 WQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAH usage_00302.pdb 181 GAFINDLDTSNDFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRM 240 usage_00469.pdb 131 GAFINDLDTSNDFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRM 190 usage_00470.pdb 131 GAFINDLDTSNDFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRM 190 GAFINDLDTSNDFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRM usage_00302.pdb 241 HPRMLTTAIVVNQAGQIHVTD--------------------------------------- 261 usage_00469.pdb 191 HPRMLTTAIVVNQAGQIHVTDLLNPSNSQVCYTQPQGVVLHFDVSRTGEGKALADNKHNT 250 usage_00470.pdb 191 HPRMLTTAIVVNQAGQIHVTDLLNPSNSQVCYTQPQGVVLHFDVSRTGEGKALADNKHNT 250 HPRMLTTAIVVNQAGQIHVTD usage_00302.pdb ----- usage_00469.pdb 251 YV--- 252 usage_00470.pdb 251 YVWGS 255 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################