################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:34 2021 # Report_file: c_1209_143.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00880.pdb # 2: usage_01315.pdb # 3: usage_01316.pdb # 4: usage_01727.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 54 ( 35.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 54 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00880.pdb 1 KVD-ITIKIQRD-GQEIEIDIRV---STGKELERALQELEKALAR--------- 40 usage_01315.pdb 1 TNDAGVIMLPD-GRPLLVAVFVKDSAESERTNEAIIAQVAQAAYQFELKKLSAV 53 usage_01316.pdb 1 TNDAGVIMLPD-GRPLLVAVFVKDSAESERTNEAIIAQVAQAAYQFELK----- 48 usage_01727.pdb 1 DNDAGFVILPN-GQKYYIAVFV-ESQETDADNAAIIASISKIVYDTLNSD---- 48 nD g i lp avfv e neaiia a y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################