################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:54 2021 # Report_file: c_0851_30.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00027.pdb # 3: usage_00541.pdb # 4: usage_00655.pdb # 5: usage_00656.pdb # 6: usage_00657.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 71 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 71 ( 59.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ----GQDGSYLTEFLLGKGYE---V--HGLIRRS-S-NF---NTQRINHIYIDK-ALM-- 43 usage_00027.pdb 1 ---DANALPAAAQAAENLKRAEGVT--IVG-F-S-T----PNVMRPYIE---R-GT---- 40 usage_00541.pdb 1 ------LAHRVLDLVEEEGAD---LRHTVL-C-HNPS--H---DPVYQA---T-LA--QR 38 usage_00655.pdb 1 WDKTGDILAEAALGLQRAGAE---G--IVL-C-TNTM---HKVADAIES---R-C----- 41 usage_00656.pdb 1 WDKTGDILAEAALGLQRAGAE---G--IVL-C-TNTM---HKVADAIES---R-C----- 41 usage_00657.pdb 1 WDKTGDILAEAALGLQRAGAE---G--IVL-C-TNTM---HKVADAIES---R-C----- 41 g vl usage_00001.pdb 44 KLHY------- 47 usage_00027.pdb 41 ----IQRFGL- 46 usage_00541.pdb 39 GAF---LE-F- 44 usage_00655.pdb 42 TLP---FL-H- 47 usage_00656.pdb 42 TLP---FL-H- 47 usage_00657.pdb 42 TLP---FL-HI 48 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################