################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:35 2021 # Report_file: c_1082_62.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00086.pdb # 2: usage_00145.pdb # 3: usage_00146.pdb # 4: usage_00791.pdb # # Length: 76 # Identity: 5/ 76 ( 6.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 37/ 76 ( 48.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 76 ( 43.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 SLRLEGQKTAAIEILQQFDWQVP------DWVIVPG-GN---LGNIYAFYKGFKMCQELG 50 usage_00145.pdb 1 ---LEGQKTAAIEILQQFDWQVP------DWVIVPG-GN---LGNIYAFYKGFKCQELGL 47 usage_00146.pdb 1 ---LEGQKTAAIEILQQFDWQVP------DWVIVPG-GN---LGNIYAFYKGFKCQELGL 47 usage_00791.pdb 1 ------DTLQARAMLDIVK----RYNWTYVSAVHT-EG-NYGESGMDAFKELAA--QEGL 46 qktaAieiLqqfd dwvivp G lgniyAFykgfk gl usage_00086.pdb 51 LVDR-IPRMVCAQA-- 63 usage_00145.pdb 48 VDR--IPRVCA---QA 58 usage_00146.pdb 48 VDR--IPRVCA---QA 58 usage_00791.pdb 47 C---IAHSDKI---Y- 55 ipr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################