################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:08:19 2021 # Report_file: c_0514_30.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00055.pdb # 2: usage_00056.pdb # 3: usage_00060.pdb # 4: usage_00061.pdb # 5: usage_00062.pdb # 6: usage_00063.pdb # 7: usage_00290.pdb # 8: usage_00565.pdb # 9: usage_00566.pdb # # Length: 125 # Identity: 91/125 ( 72.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 103/125 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/125 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 -------------------NPFEDAKKVICIEPHPDDCAIG-GGTIKKLSDEGVEVIYIC 40 usage_00056.pdb 1 -------------------NPFEDAKKVICIEPHPDDCAIG-GGTIKKLSDEGVEVIYIC 40 usage_00060.pdb 1 -FEEAFNKLLKEVLEFNLENPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 59 usage_00061.pdb 1 -------------------NPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 41 usage_00062.pdb 1 -------------------NPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 41 usage_00063.pdb 1 TFEEAFNKLLKEVLEFNLENPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 60 usage_00290.pdb 1 -FEEAFNKLLREVLEFDLQNPFKDAKKVLCIEPHPDDCVIGMGGTIKKLSDMGVEVIYVC 59 usage_00565.pdb 1 -FEEAFNKLLKEVLEFNLENPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 59 usage_00566.pdb 1 -------------------NPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYIC 41 NPFeDAKKViCIEPHPDDCaIG GGTIKKLSDeGVEVIYiC usage_00055.pdb 41 -TDGY-GTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 98 usage_00056.pdb 41 -TDGY-GTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 98 usage_00060.pdb 60 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 119 usage_00061.pdb 42 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 101 usage_00062.pdb 42 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 101 usage_00063.pdb 61 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 120 usage_00290.pdb 60 MTDGYMGTTDESLSGHELAAIRRKEEEESARLLGVKKIYWLNYRDTELPYSREVRKDLTK 119 usage_00565.pdb 60 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 119 usage_00566.pdb 42 MTDGYMGTTDEKLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKDLVK 101 TDGY GTTDEkLSGHELAlIRRrEEEESAkLLGVrKIYWLNYRDTELPYSREVRKDLvK usage_00055.pdb 99 IIRKE 103 usage_00056.pdb 99 IIRKE 103 usage_00060.pdb 120 IIRKE 124 usage_00061.pdb 102 IIRKE 106 usage_00062.pdb 102 IIRKE 106 usage_00063.pdb 121 IIRKE 125 usage_00290.pdb 120 ILRKE 124 usage_00565.pdb 120 IIRKE 124 usage_00566.pdb 102 IIRKE 106 IiRKE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################