################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:50:24 2021 # Report_file: c_1099_15.html ################################################################################################ #==================================== # Aligned_structures: 28 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00091.pdb # 6: usage_00092.pdb # 7: usage_00231.pdb # 8: usage_00233.pdb # 9: usage_00234.pdb # 10: usage_00235.pdb # 11: usage_00282.pdb # 12: usage_00327.pdb # 13: usage_00328.pdb # 14: usage_00329.pdb # 15: usage_00330.pdb # 16: usage_00331.pdb # 17: usage_00502.pdb # 18: usage_00503.pdb # 19: usage_00504.pdb # 20: usage_00505.pdb # 21: usage_00581.pdb # 22: usage_00582.pdb # 23: usage_00583.pdb # 24: usage_00584.pdb # 25: usage_00585.pdb # 26: usage_00586.pdb # 27: usage_00728.pdb # 28: usage_00729.pdb # # Length: 84 # Identity: 12/ 84 ( 14.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 84 ( 26.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 84 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--T--LPEE-ENTPEKRVDRI 55 usage_00002.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--T--LPEE-ENTPEKRVDRI 55 usage_00003.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVG------LPEE-ENTPEKRVDRI 53 usage_00004.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV-------LPEE-ENTPEKRVDRI 52 usage_00091.pdb 1 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSS--VMKMPED-ESTPEKRTEKI 57 usage_00092.pdb 1 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSS--VMKMPED-ESTPEKRTEKI 57 usage_00231.pdb 1 -VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESEL----VLSED---MIEVMVDKA 52 usage_00233.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--T---------TPEKRVDRI 49 usage_00234.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-------T-VENTPEKRVDRI 52 usage_00235.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-------TVELNTPEKRVDRI 53 usage_00282.pdb 1 --EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT---------LSPEEFINLV 49 usage_00327.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM---------PEE-ENTPEKRVDRI 50 usage_00328.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV-------GPEE-ENTPEKRVDRI 52 usage_00329.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--TVELPEE-ENTPEKRVDRI 57 usage_00330.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVG------LPEE-ENTPEKRVDRI 53 usage_00331.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV--------PEE-ENTPEKRVDRI 51 usage_00502.pdb 1 -LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--T---------TPEKRVDRI 48 usage_00503.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-------T-VENTPEKRVDRI 52 usage_00504.pdb 1 -LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-------TVELNTPEKRVDRI 52 usage_00505.pdb 1 -LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--TVELPEE-ENTPEKRVDRI 56 usage_00581.pdb 1 NLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ-----------NTPQKRVDKI 49 usage_00582.pdb 1 -LDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVG---------------QKRVDKI 44 usage_00583.pdb 1 -LDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ-----------NTPQKRVDKI 48 usage_00584.pdb 1 --DEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--Q-PQTED-ENTPQKRVDKI 54 usage_00585.pdb 1 --DEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVG-------------TPQKRVDKI 45 usage_00586.pdb 1 --DEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVP---------------QKRVDKI 43 usage_00728.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV-------LPEE-ENTPEKRVDRI 52 usage_00729.pdb 1 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN--TVELPEE-ENTPEKRVDRI 57 Kl waF YD d G I E v A usage_00001.pdb 56 FAMMDKNADGKLTLQEFQEGSKAD 79 usage_00002.pdb 56 FAMMDKNADGKLTLQEFQEGSKAD 79 usage_00003.pdb 54 FAMMDKNADGKLTLQEFQEGSKAD 77 usage_00004.pdb 53 FAMMDKNADGKLTLQEFQEGSKAD 76 usage_00091.pdb 58 FRQMDTNRDGKLSLEEFIRGAKS- 80 usage_00092.pdb 58 FRQMDTNRDGKLSLEEFIRGAKSD 81 usage_00231.pdb 53 FVQADRKNDGKIDIDEWKDFVSLN 76 usage_00233.pdb 50 FAMMDKNADGKLTLQEFQEGSK-- 71 usage_00234.pdb 53 FAMMDKNADGKLTLQEFQEGSKA- 75 usage_00235.pdb 54 FAMMDKNADGKLTLQEFQEGSK-- 75 usage_00282.pdb 50 FHKIDINNDGELTLEEFINGMAKD 73 usage_00327.pdb 51 FAMMDKNADGKLTLQEFQEGSKAD 74 usage_00328.pdb 53 FAMMDKNADGKLTLQEFQEGSKAD 76 usage_00329.pdb 58 FAMMDKNADGKLTLQEFQEGSKAD 81 usage_00330.pdb 54 FAMMDKNADGKLTLQEFQEGSKAD 77 usage_00331.pdb 52 FAMMDKNADGKLTLQEFQEGSKAD 75 usage_00502.pdb 49 FAMMDKNADGKLTLQEFQEGSK-- 70 usage_00503.pdb 53 FAMMDKNADGKLTLQEFQEGSKA- 75 usage_00504.pdb 53 FAMMDKNADGKLTLQEFQEGSK-- 74 usage_00505.pdb 57 FAMMDKNADGKLTLQEFQEGS--- 77 usage_00581.pdb 50 FDQMDKNHDDRLTLEEFREGSKA- 72 usage_00582.pdb 45 FDQMDKNHDDRLTLEEFREGSKA- 67 usage_00583.pdb 49 FDQMDKNHDDRLTLEEFREGSK-- 70 usage_00584.pdb 55 FDQMDKNHDDRLTLEEFREGSKAD 78 usage_00585.pdb 46 FDQMDKNHDDRLTLEEFREGSK-- 67 usage_00586.pdb 44 FDQMDKNHDDRLTLEEFREGSK-- 65 usage_00728.pdb 53 FAMMDKNADGKLTLQEFQEGSKAD 76 usage_00729.pdb 58 FAMMDKNADGKLTLQEFQEGSKAD 81 F D n D l l Ef g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################