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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:58:01 2021
# Report_file: c_1119_14.html
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#====================================
# Aligned_structures: 8
#   1: usage_00118.pdb
#   2: usage_00119.pdb
#   3: usage_00238.pdb
#   4: usage_00239.pdb
#   5: usage_00300.pdb
#   6: usage_00316.pdb
#   7: usage_00317.pdb
#   8: usage_00346.pdb
#
# Length:         72
# Identity:       27/ 72 ( 37.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/ 72 ( 41.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 72 ( 19.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00118.pdb         1  -EQ-VMQIAQVLSGYTLGGADMLRRA--MGKKKPEEMAKQRSVFAEGAEKNGINAELAMK   56
usage_00119.pdb         1  QEQ-IMQIASQVAGYSLGEADLLRRA--MGKKRVEEMQKHRERFVRGAKERGVPEEEANR   57
usage_00238.pdb         1  -EQ-VMQIAQVLSGYTLGGADMLRRA--MGKKKPEEMAKQRSVFAEGAEKNGINAELAMK   56
usage_00239.pdb         1  -EQ-VMQIAQVLSGYTLGGADMLRRA--MGKKKPEEMAKQRSVFAEGAEKNGINAELAMK   56
usage_00300.pdb         1  -EQ-VMQIAQVLSGYTLGGADMLRRA--MGKKKPEEMAKQRSVFAEGAEKNGINAELAMK   56
usage_00316.pdb         1  QEQ-IMQIASQVAGYSLGEADLLRRA--MGKKRVEEMQKHRERFVRGAKERGVPEEEANR   57
usage_00317.pdb         1  -YQEQVQIAQVLSGYTLGGADL----RRAGKKKPEE-AKQRSVFAEGAEKNGINAELA-K   53
usage_00346.pdb         1  -EQ-VMQIAQVLSGYTLGGADMLRRA--MGKKKPEEMAKQRSVFAEGAEKNGINAELAMK   56
                            eQ  mQIA    GY LG AD       mGKK  EE  K R  F  GA   G   E A  

usage_00118.pdb        57  IFDLVEKF----   64
usage_00119.pdb        58  LFDMLEAFANYG   69
usage_00238.pdb        57  IFDLVEKF----   64
usage_00239.pdb        57  IFDLVEKF----   64
usage_00300.pdb        57  IFDLVEKFAGYG   68
usage_00316.pdb        58  LFDMLEAF----   65
usage_00317.pdb        54  IFDLVEKFAG--   63
usage_00346.pdb        57  IFDLVEKF----   64
                            FD  E F    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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