################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:58:07 2021 # Report_file: c_0526_9.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00038.pdb # 2: usage_00078.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00081.pdb # 6: usage_00082.pdb # 7: usage_00085.pdb # 8: usage_00086.pdb # 9: usage_00136.pdb # 10: usage_00137.pdb # 11: usage_00138.pdb # 12: usage_00139.pdb # 13: usage_00140.pdb # # Length: 106 # Identity: 39/106 ( 36.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 75/106 ( 70.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/106 ( 5.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00038.pdb 1 PPRLLKLIRARWGNVDEMKENFMRKATALFGSGWIWLVWDTRERRLDLVGTKDAHSPLSE 60 usage_00078.pdb 1 -GAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 57 usage_00079.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00080.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00081.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00082.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00085.pdb 1 ---VAAAIDAAFGSFEEFKAKFTDSAINNFGSSWTWLVKNA-DGSLAIVNTSNAATPLT- 55 usage_00086.pdb 1 -GAVAAAIDAAFGSFEEFKAKFTDSAINNFGSSWTWLVKNA-DGSLAIVNTSNAATPLT- 57 usage_00136.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00137.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00138.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00139.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 usage_00140.pdb 1 ---VADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLA-DGSLDIVNTSNAATPLT- 55 va aI A Gsf fK d A nnFGSsWtWLVk a dgsL iVnTsnAatPLt usage_00038.pdb 61 DAGKIPLFTCDVWEHAYYLDYQHDRAAYLTRWWSLINWEFADSNL- 105 usage_00078.pdb 58 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 102 usage_00079.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANFA 101 usage_00080.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 usage_00081.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 usage_00082.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 usage_00085.pdb 56 DEGVTPLLTVDLWEHAYYIDFRNVRPDYMGAFWSLVNWSFVEENL- 100 usage_00086.pdb 58 DEGVTPLLTVDLWEHAYYIDFRNVRPDYMGAFWSLVNWSFVEENL- 102 usage_00136.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 usage_00137.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANFA 101 usage_00138.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANFA 101 usage_00139.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 usage_00140.pdb 56 DDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANF- 100 D GvtP lTvDlWEHAYYiD rnvRpdY fWSLvNW F N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################