################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:50 2021 # Report_file: c_0302_51.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00008.pdb # 2: usage_00012.pdb # 3: usage_00057.pdb # 4: usage_00109.pdb # 5: usage_00110.pdb # # Length: 118 # Identity: 14/118 ( 11.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/118 ( 35.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/118 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 60 usage_00012.pdb 1 -TAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQI 59 usage_00057.pdb 1 PVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNL 60 usage_00109.pdb 1 -VAGITPFNFPVMVPLWMFPMAIVCGNCFVLKPSERDPSSTLYIAQLLQEAGLPDGVMNV 59 usage_00110.pdb 1 -VAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNV 59 I pwN P w pAla Gn kp e P tal a eAg P GV n usage_00008.pdb 61 VPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLE---------- 108 usage_00012.pdb 60 VTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI-KRISLELGGNAPFIVF 116 usage_00057.pdb 61 VQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHL-KRLSPE---------- 107 usage_00109.pdb 60 VNGDK-EAVDALLHDDRVKAVSFVGSTPIAEYIYRTASANG-KRCQALGGAKNHAIVM 115 usage_00110.pdb 60 LTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK------ 111 v G e g l v ftG T g a Kr e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################