################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:34:21 2021 # Report_file: c_0296_7.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00089.pdb # 6: usage_00090.pdb # 7: usage_00091.pdb # 8: usage_00105.pdb # 9: usage_00106.pdb # 10: usage_00149.pdb # 11: usage_00150.pdb # 12: usage_00151.pdb # 13: usage_00259.pdb # 14: usage_00260.pdb # 15: usage_00261.pdb # 16: usage_00262.pdb # 17: usage_00295.pdb # 18: usage_00296.pdb # 19: usage_00297.pdb # 20: usage_00313.pdb # 21: usage_00314.pdb # # Length: 139 # Identity: 60/139 ( 43.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/139 ( 43.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/139 ( 14.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00015.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00016.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00017.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00089.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00090.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00091.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00105.pdb 1 --KVAILGAAGGIGQPLAMLMKMNP-LV-SVLHL-YDVVNAPGVTADISHMDTGAVVRGF 55 usage_00106.pdb 1 --KVAILGAAGGIGQPLAMLMKMNP-LV-SVLHL-YDVVNAPGVTADISHMDTGAVVRGF 55 usage_00149.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00150.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00151.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00259.pdb 1 NAKVAVIGAAGGIGQALALLLKNRLPA-GSDLALYDIAPVTPGVAADLSHIPTHVSIKGY 59 usage_00260.pdb 1 --KVAVIGAAGGIGQALALLLKNRLPA-GSDLALYDIAPVTPGVAADLSHIPTHVSIKGY 57 usage_00261.pdb 1 -AKVAVIGAAGGIGQALALLLKNRLPA-GSDLALYDIAPVTPGVAADLSHIPTHVSIKGY 58 usage_00262.pdb 1 -AKVAVIGAAGGIGQALALLLKNRLPA-GSDLALYDIAPVTPGVAADLSHIPTHVSIKGY 58 usage_00295.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00296.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00297.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00313.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 usage_00314.pdb 1 -MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF 58 KVA GAAGGIGQ LA L K S L L PGV D SH T G usage_00014.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00015.pdb 59 SGED-ATPALEGADVVLISAGVAR----DRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 113 usage_00016.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00017.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00089.pdb 59 SGED-ATPALEGADVVLISAGV-------RSDLFNVNAGIVKNLVQQVAKTCPKACIGII 110 usage_00090.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00091.pdb 59 SGED-ATPALEGADVVLISAGV-----MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 112 usage_00105.pdb 56 LGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 115 usage_00106.pdb 56 LGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 115 usage_00149.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00150.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00151.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00259.pdb 60 AGED-PTPALEGADVVLISAGVA------RADLFNVNAGIVKSLAERIAVVCPNACIGII 112 usage_00260.pdb 58 AGED-PTPALEGADVVLISAGVAR----DRADLFNVNAGIVKSLAERIAVVCPNACIGII 112 usage_00261.pdb 59 AGED-PTPALEGADVVLISAGV-------AADLFNVNAGIVKSLAERIAVVCPNACIGII 110 usage_00262.pdb 59 AGED-PTPALEGADVVLISAGVAR----DRADLFNVNAGIVKSLAERIAVVCPNACIGII 113 usage_00295.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00296.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00297.pdb 59 SGED-ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 usage_00313.pdb 59 SGED-ATPALEGADVVLISAG-----------LFNVNAGIVKNLVQQVAKTCPKACIGII 106 usage_00314.pdb 59 SGED-ATPALEGADVVLISAGV----------LFNVNAGIVKNLVQQVAKTCPKACIGII 107 G AL G D AG LF NAGIVK L A CP A I usage_00014.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00015.pdb 114 TNPVNTTVAIAAEVLKKAG 132 usage_00016.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00017.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00089.pdb 111 TNPVNTTVAIAAEVLKKAG 129 usage_00090.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00091.pdb 113 TNPVNTTVAIAAEVLKKAG 131 usage_00105.pdb 116 SNPVNSTVPIAAEVFKKA- 133 usage_00106.pdb 116 SNPVNSTVPIAAEVFKKA- 133 usage_00149.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00150.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00151.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00259.pdb 113 TNPVNTTVPIAAEVLKKAG 131 usage_00260.pdb 113 TNPVNTTVPIAAEVLKKAG 131 usage_00261.pdb 111 TNPVNTTVPIAAEVLKKAG 129 usage_00262.pdb 114 TNPVNTTVPIAAEVLKKAG 132 usage_00295.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00296.pdb 118 TNPVNTTVAIAAEVLKK-- 134 usage_00297.pdb 118 TNPVNTTVAIAAEVLKKAG 136 usage_00313.pdb 107 TNPVNTTVAIAAEVLKKAG 125 usage_00314.pdb 108 TNPVNTTVAIAAEVLKKAG 126 NPVN TV IAAEV KK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################