################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:38 2021 # Report_file: c_1335_45.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00230.pdb # 2: usage_00654.pdb # 3: usage_00655.pdb # 4: usage_00657.pdb # 5: usage_00658.pdb # 6: usage_00702.pdb # 7: usage_00703.pdb # 8: usage_00704.pdb # 9: usage_01179.pdb # # Length: 54 # Identity: 0/ 54 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 54 ( 9.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 54 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00230.pdb 1 -----HALREMADVLKKEGVEVSYA-----IHPVAGRMPGH--MNVLLAEAN-- 40 usage_00654.pdb 1 --TVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 39 usage_00655.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_00657.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_00658.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_00702.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_00703.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_00704.pdb 1 AETVIPMMDAVIDQCAEHGLDEVVI-----AMPH------R--GRLNVLANIVG 41 usage_01179.pdb 1 EAAKKVGELVAKRALEKGIK-QVVFDRGGYLYHG---R--VKALADAAREAG-- 46 d g vv p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################