################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:13:58 2021 # Report_file: c_0046_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00028.pdb # 2: usage_00029.pdb # 3: usage_00087.pdb # 4: usage_00088.pdb # 5: usage_00089.pdb # 6: usage_00090.pdb # 7: usage_00220.pdb # 8: usage_00247.pdb # 9: usage_00248.pdb # 10: usage_00296.pdb # # Length: 206 # Identity: 61/206 ( 29.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 64/206 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 5/206 ( 2.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00028.pdb 1 GSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAV 60 usage_00029.pdb 1 GSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAV 60 usage_00087.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGVTGESATLNHDEHADVVMMT 60 usage_00088.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGVTGESATLNHDEHADVVMMT 60 usage_00089.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00090.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00220.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 usage_00247.pdb 1 GVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRT 59 usage_00248.pdb 1 GVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRT 59 usage_00296.pdb 1 GSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMT 60 G A TP G L G G TGES T E usage_00028.pdb 61 VKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIA 120 usage_00029.pdb 61 VKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIA 120 usage_00087.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00088.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00089.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYFNRPSQEGLYQHFKAIA 120 usage_00090.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00220.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 usage_00247.pdb 60 LEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYIS 119 usage_00248.pdb 60 LEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYIS 119 usage_00296.pdb 61 LDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA 120 PVI G G N T L G L V PYyN P QEG YQH K I usage_00028.pdb 121 EATSIPMIIYNVPGRTVVSMTNDTILRLAE-IPNIVGVKEASGNIGSNIELINRA---PE 176 usage_00029.pdb 121 EATSIPMIIYNVPGRTVVSMTNDTILRLAE-IPNIVGVKEASGNIGSNIELINRA---PE 176 usage_00087.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 usage_00088.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 usage_00089.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 usage_00090.pdb 121 EHTDLPQILFNVPSRTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 usage_00220.pdb 121 EHTDLPQILYNVPSHTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 usage_00247.pdb 120 ERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQARS 179 usage_00248.pdb 120 ERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQARS 179 usage_00296.pdb 121 EHTDLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGIKEATGNLTRVNQIKELV---SD 176 E T yNVP rT T R A N G KEA usage_00028.pdb 177 GFVVLSGDDHTALPFMLCGGHGVITV 202 usage_00029.pdb 177 GFVVLSGDDHTALPFMLCGGHGVITV 202 usage_00087.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 usage_00088.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 usage_00089.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 usage_00090.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 usage_00220.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 usage_00247.pdb 180 DFMVWSGNDDRTFYLLCAGGDGVISV 205 usage_00248.pdb 180 DFMVWSGNDDRTFYLLCAGGDGVISV 205 usage_00296.pdb 177 DFVLLSGDDASALDFMQLGGHGVISV 202 F SG D GG GVI V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################