################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:02 2021 # Report_file: c_1410_49.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00302.pdb # 2: usage_01010.pdb # 3: usage_01011.pdb # 4: usage_01067.pdb # 5: usage_01068.pdb # # Length: 77 # Identity: 23/ 77 ( 29.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 77 ( 29.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 77 ( 19.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 ITFRKLYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDMEGIGY 60 usage_01010.pdb 1 ----KETMKDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDMDFGGY 56 usage_01011.pdb 1 ----KETMKDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDMDFGGY 56 usage_01067.pdb 1 ---RKLYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDMEGIGY 57 usage_01068.pdb 1 --FRKLYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIM----EGIGY 54 K K I E LLLK N YN FC D S D G M GY usage_00302.pdb 61 SKVVENNLRS------- 70 usage_01010.pdb 57 STKAENKIQEVFKGAHG 73 usage_01011.pdb 57 STKAENKIQEVFKGAHG 73 usage_01067.pdb 58 SKVVENNLRSIFG---- 70 usage_01068.pdb 55 SKVVENNLRSIFG---- 67 S EN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################