################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:29 2021 # Report_file: c_0752_18.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00005.pdb # 4: usage_00210.pdb # 5: usage_00214.pdb # 6: usage_00307.pdb # # Length: 71 # Identity: 11/ 71 ( 15.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 71 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 71 ( 35.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ---TISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPAD---T-------------DE 41 usage_00003.pdb 1 ---TISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPAD---T-------------DE 41 usage_00005.pdb 1 ---TISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPAD---T-------------DE 41 usage_00210.pdb 1 EPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDA------------VSTD 48 usage_00214.pdb 1 EPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVS---GDDRPVAGLFPAVSTD 57 usage_00307.pdb 1 ---NISFSPKYMLDALKVLEGAEIRVSFTGAMRPFLIRTPN---D-------------ET 41 tI FnPtYl D L L se v F A P l p usage_00001.pdb 42 DFQLITPVRT- 51 usage_00003.pdb 42 DFQLIT----- 47 usage_00005.pdb 42 DFQLITPVRT- 51 usage_00210.pdb 49 YVYLLMPVRL- 58 usage_00214.pdb 58 YVYLLMPVRL- 67 usage_00307.pdb 42 IVQLILPVRTY 52 L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################