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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:20:40 2021
# Report_file: c_0048_1.html
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#====================================
# Aligned_structures: 6
#   1: usage_00001.pdb
#   2: usage_00004.pdb
#   3: usage_00005.pdb
#   4: usage_00045.pdb
#   5: usage_00138.pdb
#   6: usage_00153.pdb
#
# Length:        250
# Identity:       62/250 ( 24.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    215/250 ( 86.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           34/250 ( 13.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00001.pdb         1  -NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDV-   58
usage_00004.pdb         1  -NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDV-   58
usage_00005.pdb         1  KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDV-   59
usage_00045.pdb         1  KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDV-   59
usage_00138.pdb         1  --AVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVA   58
usage_00153.pdb         1  KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDV-   59
                             vifvaalGGIGLdtSreLvkrnlknfvIlDrveNptalaeLkAinPkvnitfhtyDV 

usage_00001.pdb        59  TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNVTTAILDFWDK  118
usage_00004.pdb        59  TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDK  118
usage_00005.pdb        60  TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDK  119
usage_00045.pdb        60  TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDK  119
usage_00138.pdb        59  -N-KKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGK  116
usage_00153.pdb        60  TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNVTTAILDFWDK  119
                            v vaeskkllkkIfdqlktvDIliNgAGIldDhqieRTiaiNftGlvN TtaiLdfwdK

usage_00001.pdb       119  RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK--LAPITGVTAYSINPG  176
usage_00004.pdb       119  RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK--LAPITGVTAYSINPG  176
usage_00005.pdb       120  RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK--LAPITGVTAYSINPG  177
usage_00045.pdb       120  RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK--LAPITGVTAYSINPG  177
usage_00138.pdb       117  DNGGKGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPG  176
usage_00153.pdb       120  RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK--LAPITGVTAYSINPG  177
                           rkGGpGGIiaNicSVtGfnaihqvPVYsAsKAavvsFTnsLAk  lapitGvtaysinPG

usage_00001.pdb       177  ITRTPLVHTFNSWLD---------V-----EPRVAELLLSHP-TQTSEQCGQNFVKAIEA  221
usage_00004.pdb       177  ITRTPLVHTFNSWLD---------V-----EPRVAELLLSHP-TQTSEQCGQNFVKAIEA  221
usage_00005.pdb       178  ITRTPLVHTFNSWLD---------V-----EPRVAELLLSHP-TQTSEQCGQNFVKAIEA  222
usage_00045.pdb       178  ITRTPLVHTFNSWLD---------V-----EPRVAELLLSHP-TQTSEQCGQNFVKAIEA  222
usage_00138.pdb       177  ATM----------TDMFTNFTEKIIFPETS--DETYRILDRLNKQSAADVSRCILNVLEK  224
usage_00153.pdb       178  ITR----HTFNSWLD---------V-----EPRVAELLLSHP-TQTSEQCGQNFVKAIEA  218
                           iTr          lD         v       rvaellLshp tQtseqcgqnfvkaiEa

usage_00001.pdb       222  NKNGAIWKLD  231
usage_00004.pdb       222  NKNGAIWKLD  231
usage_00005.pdb       223  NKNGAIWKLD  232
usage_00045.pdb       223  NKNGAIWKLD  232
usage_00138.pdb       225  DKNGAVYVIE  234
usage_00153.pdb       219  NKNGAIWKLD  228
                           nKNGAiwkld


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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