################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:39 2021 # Report_file: c_1037_28.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00047.pdb # 2: usage_00048.pdb # 3: usage_00049.pdb # 4: usage_00078.pdb # 5: usage_00079.pdb # 6: usage_00255.pdb # 7: usage_00268.pdb # 8: usage_00340.pdb # # Length: 57 # Identity: 0/ 57 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 57 ( 21.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 57 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00047.pdb 1 --RVFCRVDFNVPM---E-QG---AITDDTRIRAALPTIRYLIEHGAKVILASHL-G 47 usage_00048.pdb 1 --TVFLRVDLNSPM---K-DG---KIISDARFKAVLPTIRYLIESGAKVVIGTHQ-G 47 usage_00049.pdb 1 --TVFLRVDLNSPM---K-DG---KIISDARFKAVLPTIRYLIESGAKVVIGTHQ-G 47 usage_00078.pdb 1 --RVFIRVDFNVPL---D-GK---KITSNQRIVAALPTIKYVLEHHPRYVVLASHLG 48 usage_00079.pdb 1 MVRYMVTSALPYANGPIH-AGHLA-----GAYLPADIFVRYLRLKGEDVVFIC-G-T 49 usage_00255.pdb 1 --TVLVRADFNVPL---K-DG---EITNDNRIVQALPTIQYIIEQGGKIVLFSHL-G 47 usage_00268.pdb 1 --KVFIRCDFNVPQ---DDFL---NITDDRRIRSAIPTIRYCLDNGCSVILASHL-G 48 usage_00340.pdb 1 --KVLVRVDFNVPI---E-NG---IIKDTNRITATLPTINHLKKEGASKIILISHCG 48 v r d n p r pti y g g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################