################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:04 2021 # Report_file: c_1023_24.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00476.pdb # 2: usage_00840.pdb # 3: usage_00847.pdb # 4: usage_00848.pdb # 5: usage_00849.pdb # 6: usage_00850.pdb # 7: usage_00876.pdb # 8: usage_00877.pdb # 9: usage_00878.pdb # 10: usage_01328.pdb # 11: usage_01329.pdb # 12: usage_01330.pdb # 13: usage_01331.pdb # # Length: 102 # Identity: 84/102 ( 82.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 84/102 ( 82.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/102 ( 17.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00476.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 usage_00840.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 usage_00847.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_00848.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_00849.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_00850.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGI-SDQYQV---VVHLCSTKIPYKSAGK 56 usage_00876.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_00877.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_00878.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ--VV-VHLCSTKIPYKSAGK 57 usage_01328.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 usage_01329.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 usage_01330.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 usage_01331.pdb 1 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQ-MVVMVHLCSTKIPYKSAGK 59 IVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGI SDQYQ VHLCSTKIPYKSAGK usage_00476.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLL 101 usage_00840.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLL 101 usage_00847.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQEAKK--- 95 usage_00848.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEK----------- 87 usage_00849.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQEA----- 93 usage_00850.pdb 57 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQE------ 91 usage_00876.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQEAKKKLL 98 usage_00877.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQEAKKKLL 98 usage_00878.pdb 58 ESIAEVEDIEKEIKNAL-EVARKLKQYLSEKRKEQE------ 92 usage_01328.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLL 101 usage_01329.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQE------ 95 usage_01330.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLL 101 usage_01331.pdb 60 ESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQ------- 94 ESIAEVEDIEKEIKNAL EVARKLKQYLSEK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################