################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:48:40 2021 # Report_file: c_0485_2.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00003.pdb # 2: usage_00004.pdb # 3: usage_00012.pdb # 4: usage_00019.pdb # 5: usage_00020.pdb # 6: usage_00045.pdb # 7: usage_00046.pdb # 8: usage_00068.pdb # # Length: 96 # Identity: 27/ 96 ( 28.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 47/ 96 ( 49.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/ 96 ( 28.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 --VIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 57 usage_00004.pdb 1 --VIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 57 usage_00012.pdb 1 RIVIAYEPVWAIGTGKVATPEQAQEAHAFVRSKLRLLYGDKIADSTPIVYGGSVTPDNTV 60 usage_00019.pdb 1 --VIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 57 usage_00020.pdb 1 --VIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 57 usage_00045.pdb 1 GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 59 usage_00046.pdb 1 --VIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAA 57 usage_00068.pdb 1 --IIAYEPVW--------TSADVAEVHAFIHHKMHSR-FGDEGAKIRLLYGGSVKPSNAF 49 vIAYEPVW Tpaqaq vH Fir ia i YGGSV sNa usage_00003.pdb 58 ELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQ- 92 usage_00004.pdb 58 ELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQ- 92 usage_00012.pdb 61 GLMSQPDVDGALVGGASLKADSFLAIVKAAG----- 91 usage_00019.pdb 58 ELFAQPDIDGALVGGASLKA---------------- 77 usage_00020.pdb 58 ELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA 93 usage_00045.pdb 60 ELFAQPDIDGALVGGASLKA---------------- 79 usage_00046.pdb 58 ELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQ- 92 usage_00068.pdb 50 ELLSTAHVNGALIGGASLKAIDFLTICDVYRK---- 81 eL qpd dGALvGGASLKA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################