################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:40:02 2021 # Report_file: c_0302_20.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00010.pdb # 2: usage_00063.pdb # 3: usage_00163.pdb # 4: usage_00178.pdb # 5: usage_00181.pdb # 6: usage_00190.pdb # 7: usage_00348.pdb # # Length: 152 # Identity: 11/152 ( 7.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/152 ( 23.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 45/152 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 SIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMFDTPGY--------------D 46 usage_00063.pdb 1 HHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLD---YGTA-----IPLDTET--- 49 usage_00163.pdb 1 KTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEP-VPDYL-----G------EPF 48 usage_00178.pdb 1 KTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEP--------------------- 39 usage_00181.pdb 1 KTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEP-VPDYL-----G------EPF 48 usage_00190.pdb 1 KKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDE------REIKSV------EEF 48 usage_00348.pdb 1 KTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEP--------------------- 39 IL a D S a a a arl h usage_00010.pdb 47 PSILVDAFREEGRRVLDDAQARMTRRGVAG-APRLVEVEEDVAERLERAAREIGASLIVM 105 usage_00063.pdb 50 ---TYDAMLDVEKQKLSQIGNTLG---IDPAHRWLVWG--EPREEIIRIAEQENVDLIVV 101 usage_00163.pdb 49 FEEALRRRLERAEGVLEEARALTG---VPKEDALLLEG--VPAEAILQAARAEKADLIVM 103 usage_00178.pdb 40 ----LRRRLERAEGVLEEARALTG---VPKEDALLLEG--VPAEAILQAARAEKADLIVM 90 usage_00181.pdb 49 FEEALRRRLERAEGVLEEARALTG---VPKEDALLLEG--VPAEAILQAARAEKADLIVM 103 usage_00190.pdb 49 ENELKNKLTEEAKNKMENIKKELEDVGFKV-KDIIVVG--IPHEEIVKIAEDEGVDIIIM 105 usage_00348.pdb 40 -----RRRLERAEGVLEEARALTG---VPKEDALLLEG--VPAEAILQAARAEKADLIVM 89 e l l g p E i A e dlIvm usage_00010.pdb 106 GTH-----------SVAERLLRHARCPVLMIP 126 usage_00063.pdb 102 GSH--------LG-STANSVLHYAKCDVLAVR 124 usage_00163.pdb 104 GTRGLGALGSLFLGSQSQRVVAEAPCPVLLV- 134 usage_00178.pdb 91 GTRGLGALGSLFLGSQSQRVVAEAPCPVLLVR 122 usage_00181.pdb 104 GTRGLGALGSLFLGSQSQRVVAEAPCPVLLVR 135 usage_00190.pdb 106 GSHGKTNLKEILLGSVTENVIKKSNKPVLVVK 137 usage_00348.pdb 90 GTRGLGALGSLFLGSQSQRVVAEAPCPVLLVR 121 G S v a cpVL v #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################