################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:21 2021 # Report_file: c_1435_18.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00011.pdb # 2: usage_00241.pdb # 3: usage_00242.pdb # 4: usage_00244.pdb # 5: usage_00246.pdb # 6: usage_00258.pdb # 7: usage_00259.pdb # 8: usage_00345.pdb # 9: usage_00361.pdb # 10: usage_00362.pdb # 11: usage_00384.pdb # 12: usage_00385.pdb # 13: usage_00387.pdb # 14: usage_00389.pdb # 15: usage_00390.pdb # 16: usage_00403.pdb # 17: usage_00405.pdb # # Length: 56 # Identity: 26/ 56 ( 46.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 56 ( 51.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 56 ( 12.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQ--- 49 usage_00241.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00242.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00244.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00246.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQM-- 50 usage_00258.pdb 1 GEDAFSILAAKTGVCVERLLHAIQVLNNGFGGKQILGYSSLNDEFSINEVVKQMFG 56 usage_00259.pdb 1 -EDAFSILAAKTGVCVERLLHAIQVLNNGFGGKQILGYSSLNDEFSINEVVKQMFG 55 usage_00345.pdb 1 ----FSILAAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQM-- 50 usage_00361.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00362.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQ--- 49 usage_00384.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQM-- 50 usage_00385.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00387.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 usage_00389.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQM-- 50 usage_00390.pdb 1 ----FSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQM-- 50 usage_00403.pdb 1 ----FNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQM-- 50 usage_00405.pdb 1 ----FNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYG 52 F LAAKTG Ve LL I Ln gFGG IL Y SL DEF EV Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################