################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 05:30:33 2021 # Report_file: c_0224_13.html ################################################################################################ #==================================== # Aligned_structures: 40 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00012.pdb # 4: usage_00013.pdb # 5: usage_00014.pdb # 6: usage_00015.pdb # 7: usage_00024.pdb # 8: usage_00026.pdb # 9: usage_00028.pdb # 10: usage_00029.pdb # 11: usage_00030.pdb # 12: usage_00031.pdb # 13: usage_00047.pdb # 14: usage_00048.pdb # 15: usage_00049.pdb # 16: usage_00050.pdb # 17: usage_00051.pdb # 18: usage_00052.pdb # 19: usage_00059.pdb # 20: usage_00060.pdb # 21: usage_00062.pdb # 22: usage_00063.pdb # 23: usage_00064.pdb # 24: usage_00065.pdb # 25: usage_00066.pdb # 26: usage_00067.pdb # 27: usage_00068.pdb # 28: usage_00069.pdb # 29: usage_00070.pdb # 30: usage_00090.pdb # 31: usage_00109.pdb # 32: usage_00149.pdb # 33: usage_00155.pdb # 34: usage_00156.pdb # 35: usage_00166.pdb # 36: usage_00168.pdb # 37: usage_00169.pdb # 38: usage_00170.pdb # 39: usage_00171.pdb # 40: usage_00172.pdb # # Length: 144 # Identity: 51/144 ( 35.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/144 ( 35.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/144 ( 26.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00005.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00012.pdb 1 PVIIKAS-GG---RGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 51 usage_00013.pdb 1 PVIIKA----------SRVVRGDAELAQSID-----------------MVYMEKYLENPR 33 usage_00014.pdb 1 PVIIK------------RVVRGDAELAQSI-S----------------MVYMEKYLENPR 31 usage_00015.pdb 1 PVIIKA---------M-RVVRGDAELAQSI-SM---D-----------MVYMEKYLENPR 35 usage_00024.pdb 1 PVIIKAA-GG----GM-RVVYDESELIKSA-KLTR--TEAGA--GNP-MVYLEKFLTNPR 48 usage_00026.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00028.pdb 1 PVIIKAS--------M-RVVRGDAELAQSI-SMTR--AEA-----ND-MVYMEKYLENPR 42 usage_00029.pdb 1 PVIIK----------M-RVVRGDAELAQSI-SMTR--A------------YMEKYLENPR 34 usage_00030.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00031.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00047.pdb 1 PVLLKAA-A------M-KVVEREAELAEAL-SSAQRA-----------RMLVEKYLLKPR 40 usage_00048.pdb 1 PVLLKAA-A------M-KVVEREAELAEAL-SSAQRA-----------RMLVEKYLLKPR 40 usage_00049.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00050.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00051.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00052.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00059.pdb 1 PVIIKAS-GG--GRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 52 usage_00060.pdb 1 PVIIKAS----------RVVRGDAELAQSI-SMTR--AEA---------VYMEKYLENPR 38 usage_00062.pdb 1 PVIIKAS-GG----GM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 50 usage_00063.pdb 1 PVIIKAS-G-----GM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 49 usage_00064.pdb 1 PVIIKAS-G-----GM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 49 usage_00065.pdb 1 PVIIKAS-G-----GM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 49 usage_00066.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00067.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00068.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00069.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00070.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00090.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAK--FSND-MVYMEKYLENPR 52 usage_00109.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00149.pdb 1 PVIIK--RG------M-RVVRGDAELAQSI-SMTR--AEA-------KMVYMEKYLENPR 41 usage_00155.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00156.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00166.pdb 1 PVIIKAA-GGGGGRGM-RVVYDESELIKSA-KLTR--TEAGAAFGNP-MVYLEKFLTNPR 54 usage_00168.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00169.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00170.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00171.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 usage_00172.pdb 1 PVIIKAS-GGGGGRGM-RVVRGDAELAQSI-SMTR--AEAKAAFSND-MVYMEKYLENPR 54 PV K VV EL EK L PR usage_00004.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00005.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00012.pdb 52 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 111 usage_00013.pdb 34 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 93 usage_00014.pdb 32 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 91 usage_00015.pdb 36 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 95 usage_00024.pdb 49 HVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVIEEAPAPGIDEKARQEVFARCVQACIEIG 108 usage_00026.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00028.pdb 43 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 102 usage_00029.pdb 35 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 94 usage_00030.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00031.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00047.pdb 41 HVEIQVFADRHGHCLYLNERDCSIQRRHQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIG 100 usage_00048.pdb 41 HVEIQVFADRHGHCLYLNERDCSIQRRHQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIG 100 usage_00049.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00050.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00051.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00052.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00059.pdb 53 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 112 usage_00060.pdb 39 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 98 usage_00062.pdb 51 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 110 usage_00063.pdb 50 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 109 usage_00064.pdb 50 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 109 usage_00065.pdb 50 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 109 usage_00066.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00067.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00068.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00069.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00070.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00090.pdb 53 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 112 usage_00109.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00149.pdb 42 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 101 usage_00155.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00156.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00166.pdb 55 HVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVIEEAPAPGIDEKARQEVFARCVQACIEIG 114 usage_00168.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00169.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00170.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00171.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 usage_00172.pdb 55 HVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIG 114 HVE QV D G L RDCS QRRHQKV EEAPAPG R A IG usage_00004.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00005.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00012.pdb 112 YRGAGTFEFLFENGEFYFIEMNTR 135 usage_00013.pdb 94 YRGAGTFEFLFENGEFYFIEMNTR 117 usage_00014.pdb 92 YRGAGTFEFLFENGEFYFIEMNTR 115 usage_00015.pdb 96 YRGAGTFEFLFENGEFYFIEMNTR 119 usage_00024.pdb 109 YRGAGTFEFLYENGRFYF------ 126 usage_00026.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00028.pdb 103 YRGAGTFEFLFENGEFYFIEMNTR 126 usage_00029.pdb 95 YRGAGTFEFLFENGEFYFIEMNTR 118 usage_00030.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00031.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00047.pdb 101 YVGAGTVEFLLDERGQFFF----- 119 usage_00048.pdb 101 YVGAGTVEFLLDERGQFFF----- 119 usage_00049.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00050.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00051.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00052.pdb 115 YRGAGTFEFLFENGEFYFI----- 133 usage_00059.pdb 113 YRGAGTFEFLFENGEFYF------ 130 usage_00060.pdb 99 YRGAGTFEFLFENGEFYF------ 116 usage_00062.pdb 111 YRGAGTFEFLFENGEFYF------ 128 usage_00063.pdb 110 YRGAGTFEFLFENGEFYF------ 127 usage_00064.pdb 110 YRGAGTFEFLFENGEFYF------ 127 usage_00065.pdb 110 YRGAGTFEFLFENGEFYFIEMNTR 133 usage_00066.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00067.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00068.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00069.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00070.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00090.pdb 113 YRGAGTFEFLFENGEFYFIEMNTR 136 usage_00109.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00149.pdb 102 YRGAGTFEFLFENGEFYF------ 119 usage_00155.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00156.pdb 115 YRGAGTFEFLFENGEFYFIEMNTR 138 usage_00166.pdb 115 YRGAGTFEFLYENGRFYF------ 132 usage_00168.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00169.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00170.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00171.pdb 115 YRGAGTFEFLFENGEFYF------ 132 usage_00172.pdb 115 YRGAGTFEFLFENGEFYF------ 132 Y GAGT EFL F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################