################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:25:58 2021 # Report_file: c_0994_31.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00335.pdb # 2: usage_00427.pdb # 3: usage_00428.pdb # 4: usage_00429.pdb # 5: usage_00430.pdb # 6: usage_00431.pdb # 7: usage_00899.pdb # 8: usage_00900.pdb # 9: usage_00901.pdb # 10: usage_00902.pdb # # Length: 54 # Identity: 4/ 54 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 54 ( 61.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 54 ( 37.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00335.pdb 1 CKVKKEAP----FVFRITLVQGLNRQIRR-CEHFGY----EVKKLER------- 38 usage_00427.pdb 1 -CTTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTKASS-- 48 usage_00428.pdb 1 -STTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 45 usage_00429.pdb 1 -STTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTKAS--- 47 usage_00430.pdb 1 -STTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 45 usage_00431.pdb 1 -STTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTKASSFE 50 usage_00899.pdb 1 LCTTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 46 usage_00900.pdb 1 LCTTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 46 usage_00901.pdb 1 LCTTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 46 usage_00902.pdb 1 LCTTHIHMDEHNCLETIILQGN--SFEIQRLQLEI-GGLRGVKFAKLTK----- 46 tthihm cletIiLqgn sfeiq lqlei gVKfakl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################