################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:05:22 2021 # Report_file: c_1273_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00586.pdb # 2: usage_00587.pdb # 3: usage_00588.pdb # 4: usage_00589.pdb # 5: usage_00590.pdb # 6: usage_00696.pdb # 7: usage_00697.pdb # 8: usage_00698.pdb # 9: usage_00699.pdb # # Length: 56 # Identity: 43/ 56 ( 76.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 43/ 56 ( 76.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 56 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00586.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS-DPTMTHPQFLNVWWDIFTTSVVPLLQQFG- 54 usage_00587.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS-T--MTHPQFLNVWWDIFTTSVVPLLQQFG- 52 usage_00588.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS----ETHPQFLNVWWDIFTTSVVPLLQQF-- 50 usage_00589.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRSE---MTHPQFLNVWWDIFTTSVVPLLQQFG- 52 usage_00590.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS------HPQFLNVWWDIFTTSVVPL------ 44 usage_00696.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS----MTHPQFLNVWWDIFTTSVVPLLQQFGL 52 usage_00697.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS----MTHPQFLNVWWDIFTTSVVPLLQQ--- 49 usage_00698.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS-------PQFLNVWWDIFTTSVVPLLQQ--- 46 usage_00699.pdb 1 KVVHFLGQTKPWNYTYDTKTKSVRS----MTHPQFLNVWWDIFTTSVVPLLQQ--- 49 KVVHFLGQTKPWNYTYDTKTKSVRS PQFLNVWWDIFTTSVVPL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################