################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:40:28 2021 # Report_file: c_1396_24.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00127.pdb # 2: usage_00128.pdb # 3: usage_00129.pdb # 4: usage_00130.pdb # 5: usage_00131.pdb # 6: usage_00132.pdb # 7: usage_00213.pdb # 8: usage_00214.pdb # 9: usage_00327.pdb # 10: usage_00328.pdb # 11: usage_00329.pdb # # Length: 78 # Identity: 20/ 78 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 56/ 78 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 78 ( 24.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00127.pdb 1 ----EGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 56 usage_00128.pdb 1 FAAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 usage_00129.pdb 1 -AAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 59 usage_00130.pdb 1 FAAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 usage_00131.pdb 1 -AAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 59 usage_00132.pdb 1 -AAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 59 usage_00213.pdb 1 FAAFEGPCQLYCKEHKDSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 usage_00214.pdb 1 FAAFEGPCQLYCKEHKDSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 usage_00327.pdb 1 ----EAPSTDYCRHFPDSPWAKMQRLATAGQNIILQLRLIQN-GQMLEDD-----LPVLQ 50 usage_00328.pdb 1 FAAFEGPCQLYCKEHKDSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 usage_00329.pdb 1 FAAFEGPCQLYCKEHKDSAWVKIQTLLTLGNGIINTLKIIKQAQAFGIDEAVTENLKALK 60 EgPcqlYC h DSaWvKiQtLlTlGngIIntLkiIkq qafgiDe LkaLk usage_00127.pdb 57 EQFIAFQLAEADIKESLK 74 usage_00128.pdb 61 EQFIAFQLAEADIKESL- 77 usage_00129.pdb 60 EQFIAFQLAEADIKESLK 77 usage_00130.pdb 61 EQFIAFQLAEADIKESLK 78 usage_00131.pdb 60 EQFIAFQLAEADIKESLK 77 usage_00132.pdb 60 EQFIAFQLAEADIKESLK 77 usage_00213.pdb 61 EQFIAFQLAEADIKESLK 78 usage_00214.pdb 61 EQFIAFQLAEADIKESLK 78 usage_00327.pdb 51 KALDDFMQYKTEVDALLA 68 usage_00328.pdb 61 EQFIAFQLAE-------- 70 usage_00329.pdb 61 EQFIAFQLA--------- 69 eqfiaFqla #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################