################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:43 2021 # Report_file: c_1134_17.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00049.pdb # 2: usage_00050.pdb # 3: usage_00051.pdb # 4: usage_00052.pdb # 5: usage_00069.pdb # 6: usage_00304.pdb # 7: usage_00406.pdb # 8: usage_00407.pdb # 9: usage_00408.pdb # 10: usage_00409.pdb # 11: usage_00410.pdb # 12: usage_00411.pdb # 13: usage_00412.pdb # 14: usage_00413.pdb # 15: usage_00414.pdb # 16: usage_00420.pdb # 17: usage_00520.pdb # 18: usage_00521.pdb # # Length: 63 # Identity: 5/ 63 ( 7.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 63 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 63 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00050.pdb 1 ----------LLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 48 usage_00051.pdb 1 TKTASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 58 usage_00052.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00069.pdb 1 ---ASTGFAELLKDRREQV--K-DHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 54 usage_00304.pdb 1 ----GKEVGKAIEQGRQKFEPTMTQAELGKEIGETAATVASYERGTA-TPDQNILSKMER 55 usage_00406.pdb 1 ---ASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 55 usage_00407.pdb 1 ---ASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 55 usage_00408.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00409.pdb 1 ----STGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 54 usage_00410.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00411.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00412.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00413.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00414.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00420.pdb 1 --TDGEFVSEHLMELITQQ--NLTINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCG 56 usage_00520.pdb 1 --TASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 56 usage_00521.pdb 1 ---ASTGFAELLKDRREQV--KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAH 55 l r q a la l Get TVaa e G t t l usage_00049.pdb 57 VL- 58 usage_00050.pdb 49 VL- 50 usage_00051.pdb 59 VL- 60 usage_00052.pdb 57 VL- 58 usage_00069.pdb 55 VL- 56 usage_00304.pdb 56 VLN 58 usage_00406.pdb 56 VLG 58 usage_00407.pdb 56 VLG 58 usage_00408.pdb 57 VL- 58 usage_00409.pdb 55 VL- 56 usage_00410.pdb 57 VLG 59 usage_00411.pdb 57 VL- 58 usage_00412.pdb 57 VLG 59 usage_00413.pdb 57 VLG 59 usage_00414.pdb 57 VLG 59 usage_00420.pdb 57 TLG 59 usage_00520.pdb 57 VLG 59 usage_00521.pdb 56 VLG 58 vL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################