################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:04 2021 # Report_file: c_0594_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00053.pdb # 2: usage_00054.pdb # 3: usage_00079.pdb # 4: usage_00116.pdb # 5: usage_00168.pdb # 6: usage_00169.pdb # 7: usage_00180.pdb # 8: usage_00181.pdb # # Length: 108 # Identity: 42/108 ( 38.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/108 ( 38.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/108 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAK 60 usage_00054.pdb 1 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAK 60 usage_00079.pdb 1 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFT 59 usage_00116.pdb 1 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFT 59 usage_00168.pdb 1 DLIVIGSGPGGYVCAIKAAQLG-KVAVVEKRSTYGGTCLNVGCIPSKALLHASE-FHQAQ 58 usage_00169.pdb 1 DLIVIGSGPGGYVCAIKAAQLG-KVAVVEKRSTYGGTCLNVGCIPSKALLHASE-FHQAQ 58 usage_00180.pdb 1 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAK 60 usage_00181.pdb 1 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAK 60 D V G GPGGYV AI AAQLG VE GG CL VGCIPSKALL E usage_00053.pdb 61 KGL--LGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQ 106 usage_00054.pdb 61 KGL--LGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQ 106 usage_00079.pdb 60 KDAKAFGI-SGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIH 106 usage_00116.pdb 60 KDAKAFGI-SGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIH 106 usage_00168.pdb 59 HGLEALGVEVANPKLNLQK--AHKDATVKSNVDGVSFLFKKNKIDGFQ 104 usage_00169.pdb 59 HGLEALGVEVANPKLNLQK--AHKDATVKSNVDGVSFLFKKNKIDGFQ 104 usage_00180.pdb 61 KGL--LGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQ 106 usage_00181.pdb 61 KGL--LGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQ 106 G GV FL KKN I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################