################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:21:28 2021 # Report_file: c_0310_1.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00023.pdb # 4: usage_00031.pdb # 5: usage_00032.pdb # 6: usage_00033.pdb # 7: usage_00054.pdb # 8: usage_00057.pdb # 9: usage_00058.pdb # 10: usage_00059.pdb # 11: usage_00060.pdb # 12: usage_00061.pdb # 13: usage_00062.pdb # 14: usage_00065.pdb # 15: usage_00066.pdb # # Length: 105 # Identity: 20/105 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 34/105 ( 32.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/105 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --NTAALDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLL-LTDIDGLY 57 usage_00002.pdb 1 --NTAALDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLL-LTDIDGLY 57 usage_00023.pdb 1 PS--VLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGIL 58 usage_00031.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00032.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00033.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00054.pdb 1 -R--VIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVL 57 usage_00057.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00058.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00059.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00060.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00061.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00062.pdb 1 SE--VIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGIL 58 usage_00065.pdb 1 PS--VLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGIL 58 usage_00066.pdb 1 PS--VLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGIL 58 l g IPv a d G NINADt A A AL AeKL lTd G usage_00001.pdb 58 TRWPDRDSLVSEIDTGTLAQLLPTL--EL-GVPKVEACLRAVIGG 99 usage_00002.pdb 58 TRWPDRDSLVSEIDTGTLAQLLPTL--EL-GVPKVEACLRAVIGG 99 usage_00023.pdb 59 ENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQG 103 usage_00031.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00032.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00033.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00054.pdb 58 EN--G--AVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAG 98 usage_00057.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00058.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00059.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00060.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00061.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00062.pdb 59 EDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQG 103 usage_00065.pdb 59 ENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQG 103 usage_00066.pdb 59 ENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQG 103 sl PKv c r G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################