################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:57:07 2021 # Report_file: c_0238_1.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00010.pdb # 4: usage_00011.pdb # 5: usage_00026.pdb # 6: usage_00037.pdb # 7: usage_00049.pdb # 8: usage_00050.pdb # 9: usage_00055.pdb # 10: usage_00067.pdb # 11: usage_00092.pdb # 12: usage_00093.pdb # 13: usage_00109.pdb # # Length: 153 # Identity: 4/153 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/153 ( 11.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/153 ( 39.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 ------KQLYMDCK-NEADKFDVL-TELYGV-MT---IGSSIIFVAT-KKTANVLYGKLK 47 usage_00005.pdb 1 ----AIKQLYMDCK-NEADKFDVL-TELYGV-MT---IGSSIIFVAT-KKTANVLYGKLK 49 usage_00010.pdb 1 ------KQLYMDC---EEHKYNVL-VELYG-------IGQSIIFCKK-KDTAEEIARRMT 42 usage_00011.pdb 1 ------KQLYMDCQ-SEEHKYNVL-VELYG-T-----IGQSIIFCKK-KDTAEEIARRMT 45 usage_00026.pdb 1 GRK-EVQTMLVPMD-RVNEVYEFV-RQEVMR------GGQAFIVYPLI-KSAVEMYEYLS 50 usage_00037.pdb 1 ------KQKFRICH-SEDEKFDNL-VQLIHE-RSEVD-AKAIIFVSS-QNICDFISKKLL 49 usage_00049.pdb 1 ------KQLYMDCK-NEADKFDVLTELYGLM-T----IGSSIIFVAT-KKTANVLYGKLK 47 usage_00050.pdb 1 ------HQWYYRAD-DLEHKTALL-VHLLKQ-PE---ATRSIVFVRK-RERVHELANWLR 47 usage_00055.pdb 1 ------EHKFVHVKDDWRSKVQAL-RENK--------DKGVIVFVRT-RNRVAKLVRLFD 44 usage_00067.pdb 1 ----AIKQLYMDCK-NEADKFDVL-TELYGL-MT---IGSSIIFVAT-KKTANVLYGKLK 49 usage_00092.pdb 1 ---K----QLYDCK-NEADKFDVL-TELYGV-T----IGSSIIFVAT-KKTANVLYGKLK 45 usage_00093.pdb 1 ---K----QLYDCK-NEADKFDVL-TELYGV-T----IGSSIIFVAT-KKTANVLYGKLK 45 usage_00109.pdb 1 ------KQLYMDCK-NEADKFDVL-TELYGL-MT---IGSSIIFVAT-KKTANVLYGKLK 47 k l i f usage_00004.pdb 48 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTN------DIPTVSMVVNYDLP-T 99 usage_00005.pdb 50 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVSMVVNYDLP-T 107 usage_00010.pdb 43 ADGHTVACLT-----AQRDAIMDSFRVG-TSKVLVTTN-----IDVSQVNLVVNLD---- 87 usage_00011.pdb 46 ADGHTVACLT-----AQRDAIMDSFRVG-TSKVLVTTN-----IDVSQVNLVVNLD---- 90 usage_00026.pdb 51 KEVFKLGLMHGRLSQEEKDRVMLEFAEG-RYDILVSTTVIEVGIDVPRANVMVIENPERF 109 usage_00037.pdb 50 NAGIVTCAIHAGKPYQERLMNLEKFKREKN-SILLCTEVLSRGLNVPEVSLVIIYNAV-K 107 usage_00049.pdb 48 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVSMVVNYDLP-T 105 usage_00050.pdb 48 EAGINNCYLEGEMVQGKRNEAIKRLTEG-RVNVLVATDVAARGIDIPDVSHVFNFDMP-R 105 usage_00055.pdb 45 ----NAIELRGDLPQSVRNRNIDAFREG-EYDMLITTDVASRGLDIPLVEKVINFDAP-Q 98 usage_00067.pdb 50 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVSMVVNYDLP-T 107 usage_00092.pdb 46 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVS-VVNYDLP-T 102 usage_00093.pdb 46 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVS-VVNYDLP-T 102 usage_00109.pdb 48 SEGHEVSILHGDLQTQERDRLIDDFREG-RSKVLITTNVLARGIDIPTVSMVVNYDLP-T 105 r f g L T d v v usage_00004.pdb 100 L-ANGQADPATYIHRIGRTGRFGRKGVAISF-- 129 usage_00005.pdb 108 L-ANGQADPATYIHRIGRTGRFGRKGVAISFVH 139 usage_00010.pdb 88 -------DPQTYLHRIGR---TG--GVSINFVH 108 usage_00011.pdb 91 -------DPQTYLHRIGR---TG-VGVSINFVH 112 usage_00026.pdb 110 -------GLAQLHQLRGRVGRGGQEAYCFLVVG 135 usage_00037.pdb 108 -------TFAQYVHTTGRTA---RSGTAITLLL 130 usage_00049.pdb 106 LA-NGQADPATYIHRIGRTGRFGRKGVAISF-- 135 usage_00050.pdb 106 -------SGDTYLHRIGRTARAGRKGTAISLVE 131 usage_00055.pdb 99 -------DLRTYIHRIGRTGRMGRKGEAITF-- 122 usage_00067.pdb 108 L-ANGQADPATYIHRIGRTGRFGRKGVAISFVH 139 usage_00092.pdb 103 L-ANGQADPATYIHRIGRTGG--RKGVAISFVH 132 usage_00093.pdb 103 L-ANGQADPATYIHRIGRTGG--RKGVAISFVH 132 usage_00109.pdb 106 L-ANGQADPATYIHRIGRTGRFGRKGVAISF-- 135 y h GR g i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################