################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:10:11 2021 # Report_file: c_1483_197.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00195.pdb # 2: usage_00334.pdb # 3: usage_00901.pdb # 4: usage_01012.pdb # 5: usage_01240.pdb # 6: usage_01253.pdb # 7: usage_01554.pdb # 8: usage_02106.pdb # 9: usage_02177.pdb # 10: usage_02620.pdb # # Length: 62 # Identity: 0/ 62 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 62 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 62 ( 85.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00195.pdb 1 -HWDM----------LLER-------RS--I--EELEELLKERLELIRS----------- 27 usage_00334.pdb 1 ---------------------------P--L--PKRLGYITENVKPFDNFKKHNPD--IV 27 usage_00901.pdb 1 ---PE----------ERLNWHANSLPSD--E--LCIENAIMLKR---------------- 27 usage_01012.pdb 1 ----N----------ILTK-------MT--V--SSYQILKEYAGETLRMLNN-------- 27 usage_01240.pdb 1 -AHDR----------ILKT-------IKTH---KLKNYIKESVNFLNSG------LTK-- 31 usage_01253.pdb 1 -----YLDDNIKTYSDHPE-------KV--NK-D--DEEFIES----------------- 26 usage_01554.pdb 1 RPYDK----------VLKT-------IS--K-KNLKNYIKETFNFFK------------- 27 usage_02106.pdb 1 ----N----------VGRT-------VS--S--SGLYRIRGEFMAASRLLNS-------- 27 usage_02177.pdb 1 -SYDR----------LMKT-------IKEH---KLKNYIKESVKLFNK------------ 27 usage_02620.pdb 1 --HDK----------VLSS-------VLKN---KLSTYVKESFKFFKS------------ 26 usage_00195.pdb -- usage_00334.pdb 28 NS 29 usage_00901.pdb -- usage_01012.pdb -- usage_01240.pdb -- usage_01253.pdb -- usage_01554.pdb -- usage_02106.pdb -- usage_02177.pdb -- usage_02620.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################