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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:01:15 2021
# Report_file: c_0271_2.html
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#====================================
# Aligned_structures: 4
#   1: usage_00194.pdb
#   2: usage_00195.pdb
#   3: usage_00271.pdb
#   4: usage_00272.pdb
#
# Length:        189
# Identity:      184/189 ( 97.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    184/189 ( 97.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            5/189 (  2.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00194.pdb         1  ----VTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHE   56
usage_00195.pdb         1  LGSMVTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHE   60
usage_00271.pdb         1  ---MVTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHE   57
usage_00272.pdb         1  ---MVTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHE   57
                               VTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHE

usage_00194.pdb        57  LAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIE  116
usage_00195.pdb        61  LAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIE  120
usage_00271.pdb        58  LAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIE  117
usage_00272.pdb        58  LAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIE  117
                           LAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIE

usage_00194.pdb       117  VAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYR  176
usage_00195.pdb       121  VAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYR  180
usage_00271.pdb       118  VAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYR  177
usage_00272.pdb       118  VAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYR  177
                           VAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYR

usage_00194.pdb       177  AMFALRNAG  185
usage_00195.pdb       181  AMFALRNAG  189
usage_00271.pdb       178  AMFALRNA-  185
usage_00272.pdb       178  AMFALRNA-  185
                           AMFALRNA 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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