################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:29 2021 # Report_file: c_1221_69.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00176.pdb # 2: usage_00201.pdb # 3: usage_00206.pdb # 4: usage_00386.pdb # 5: usage_00708.pdb # 6: usage_01508.pdb # 7: usage_01509.pdb # 8: usage_01510.pdb # # Length: 44 # Identity: 0/ 44 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 44 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 44 ( 29.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00176.pdb 1 --LDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYAS--- 39 usage_00201.pdb 1 GMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYAS--- 41 usage_00206.pdb 1 TELDGLRYYVGDTTDVLFEKWFY-EDLGTQLAPIIQEFFSS--- 40 usage_00386.pdb 1 TELDGLRYYVGD-TDVLFEKWFYCKDLGTQLAPIIQEFFSS--- 40 usage_00708.pdb 1 --RHKILCVCCKCDGRIEL-TVES-----SAEDLRTLQQLFLST 36 usage_01508.pdb 1 --LDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYAS--- 39 usage_01509.pdb 1 --LDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYAS--- 39 usage_01510.pdb 1 GMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYAS--- 41 ldg y l p f s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################