################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:27:48 2021 # Report_file: c_1166_53.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00274.pdb # 2: usage_00275.pdb # 3: usage_00565.pdb # 4: usage_00639.pdb # 5: usage_00640.pdb # 6: usage_00662.pdb # 7: usage_00663.pdb # 8: usage_00664.pdb # 9: usage_00665.pdb # 10: usage_00666.pdb # 11: usage_00741.pdb # 12: usage_00742.pdb # 13: usage_00942.pdb # 14: usage_00999.pdb # 15: usage_01211.pdb # # Length: 24 # Identity: 0/ 24 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 24 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 24 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00274.pdb 1 VVMWNEKGVTVKYTPENCEQW--- 21 usage_00275.pdb 1 VVMWNEKGVTVKYTPENCEQW--- 21 usage_00565.pdb 1 VVTWNKD-MVTRVTPEGSEEW--- 20 usage_00639.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00640.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00662.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00663.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00664.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00665.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00666.pdb 1 VVTWNSKGKTIKTTPEGTEEW--- 21 usage_00741.pdb 1 VVTWNKKGAAIKTTHEDTVEW--- 21 usage_00742.pdb 1 VVTWNKKGAAIKTTHEDTVEW--- 21 usage_00942.pdb 1 VVTWNKKGAAIKTTHEDTVEW--- 21 usage_00999.pdb 1 TTFKDKC--NTCRCGSDGK--SAF 20 usage_01211.pdb 1 VVTWN-KDMVTRVTPEGSEEW--- 20 vv wn t e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################