################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:32:32 2021 # Report_file: c_1153_9.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00302.pdb # 2: usage_00835.pdb # 3: usage_01545.pdb # 4: usage_01546.pdb # 5: usage_01548.pdb # 6: usage_01550.pdb # 7: usage_01552.pdb # 8: usage_01554.pdb # 9: usage_01555.pdb # 10: usage_01557.pdb # 11: usage_01561.pdb # 12: usage_01562.pdb # 13: usage_01563.pdb # 14: usage_01564.pdb # 15: usage_01565.pdb # 16: usage_01566.pdb # 17: usage_01567.pdb # 18: usage_01684.pdb # 19: usage_01838.pdb # 20: usage_01839.pdb # 21: usage_01840.pdb # 22: usage_01841.pdb # 23: usage_01844.pdb # 24: usage_01845.pdb # 25: usage_01846.pdb # 26: usage_01848.pdb # 27: usage_01849.pdb # # Length: 52 # Identity: 4/ 52 ( 7.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 9/ 52 ( 17.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/ 52 ( 63.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 VYIEAIEL-------------------------EGTGSGFVWDKLGHI-VT- 25 usage_00835.pdb 1 VNVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 35 usage_01545.pdb 1 -NVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 34 usage_01546.pdb 1 VNVYNRGLN----NQLEI---------------RTLGSGVIMDQRGYI-ITN 32 usage_01548.pdb 1 --VYNRGLN------LEI---------------RTLGSGVIMDQRGYI-IT- 27 usage_01550.pdb 1 --VYNRGLN----NQLEI---------------RTLGSGVIMDQRGYI-IT- 29 usage_01552.pdb 1 --VYNRGLN-------EI---------------RTLGSGVIMDQRGYI-IT- 26 usage_01554.pdb 1 --VYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 33 usage_01555.pdb 1 VNVYNR---------LEI---------------RTLGSGVIMDQRGYI-IT- 26 usage_01557.pdb 1 VNVYNR---------LEI---------------RTLGSGVIMDQRGYI-IT- 26 usage_01561.pdb 1 VNVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 35 usage_01562.pdb 1 -NVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 34 usage_01563.pdb 1 VNVYNRGLN----TQLEI---------------RTLGSGVIMDQRGYI-IT- 31 usage_01564.pdb 1 --VYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 33 usage_01565.pdb 1 VNVYNR---------LEI---------------RTLGSGVIMDQRGYI-IT- 26 usage_01566.pdb 1 -VVNVYN--------------------------RTLGSGVIMDQRGYI-IT- 23 usage_01567.pdb 1 VNVYNRGLN------LEI---------------RTLGSGVIMDQRGYI-IT- 29 usage_01684.pdb 1 -SINVEGST---------TVNTPRMPRGQQQKFMALGSGVIIDADKGYVVT- 41 usage_01838.pdb 1 VNVYNRGLN--TNSQLEI---------------RTLGSGVIMDQRGYI-IT- 33 usage_01839.pdb 1 VNVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 35 usage_01840.pdb 1 -NVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 34 usage_01841.pdb 1 VNVYNRGLN------LEI---------------RTLGSGVIMDQRGYI-IT- 29 usage_01844.pdb 1 VNVYNRGLNTNSHNQLEI---------------RTLGSGVIMDQRGYI-IT- 35 usage_01845.pdb 1 VNVYN-----------EI---------------RTLGSGVIMDQRGYI-IT- 24 usage_01846.pdb 1 VNVYNRGLNTNSHNQLEI---------------RTLGSGVIDQR-GYI-IT- 34 usage_01848.pdb 1 -NVYNRG---------EI---------------RTLGSGVIDQR-GYI-IT- 24 usage_01849.pdb 1 -NVYNRG--------LEI---------------RTLGSGVIDQR-GYI-IT- 25 lGSGvi g i T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################