################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:18:20 2021 # Report_file: c_1261_137.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00316.pdb # 2: usage_00318.pdb # 3: usage_00372.pdb # 4: usage_02612.pdb # 5: usage_03528.pdb # 6: usage_03531.pdb # 7: usage_03533.pdb # 8: usage_03535.pdb # 9: usage_03538.pdb # 10: usage_03542.pdb # 11: usage_03544.pdb # 12: usage_03546.pdb # 13: usage_04713.pdb # 14: usage_04715.pdb # # Length: 33 # Identity: 0/ 33 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 33 ( 12.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 33 ( 21.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00316.pdb 1 -MKIAIIGGGQSAAEAFIDLNDSYPSVQADMIL 32 usage_00318.pdb 1 -MKIAIIGGGQSAAEAFIDLNDSYPSVQADMIL 32 usage_00372.pdb 1 -QHVYCCGPQALMDTVRDMTGHWPSG-TVHFES 31 usage_02612.pdb 1 KVFIVGSDR---SDELVKLAHDMDPSREVVV-- 28 usage_03528.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03531.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03533.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03535.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03538.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03542.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03544.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_03546.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_04713.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 usage_04715.pdb 1 -RRVAVAGGGQSAAEIVRFLHDNRPDTVVHAIM 32 g e d p #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################