################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:40 2021 # Report_file: c_1338_82.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00121.pdb # 2: usage_00447.pdb # 3: usage_00464.pdb # 4: usage_00812.pdb # 5: usage_00860.pdb # # Length: 55 # Identity: 0/ 55 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 55 ( 1.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 55 ( 76.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00121.pdb 1 --------------------SSKKILQNWHDFESLPKQTDMLVVFSTYQSI---- 31 usage_00447.pdb 1 -GTIKAMLSGPNEVNFREIPSHVLSKVCMYFTYKVR---------------YTNS 39 usage_00464.pdb 1 SGTIKAMLS-GNEVNFREIPSHVLSKVCMYFTYKVR------------------- 35 usage_00812.pdb 1 ----------------------ISSIEKKLSAFRP-APR-VIRCMTNTPVV---V 28 usage_00860.pdb 1 SGTIKAMLS-GNEVNFREIPSHVLSKVCMYFTYKVR------------------- 35 s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################