################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:53:26 2021 # Report_file: c_0116_6.html ################################################################################################ #==================================== # Aligned_structures: 36 # 1: usage_00018.pdb # 2: usage_00022.pdb # 3: usage_00024.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # 6: usage_00027.pdb # 7: usage_00029.pdb # 8: usage_00040.pdb # 9: usage_00041.pdb # 10: usage_00042.pdb # 11: usage_00043.pdb # 12: usage_00044.pdb # 13: usage_00055.pdb # 14: usage_00063.pdb # 15: usage_00066.pdb # 16: usage_00068.pdb # 17: usage_00069.pdb # 18: usage_00073.pdb # 19: usage_00077.pdb # 20: usage_00082.pdb # 21: usage_00083.pdb # 22: usage_00103.pdb # 23: usage_00124.pdb # 24: usage_00126.pdb # 25: usage_00134.pdb # 26: usage_00173.pdb # 27: usage_00174.pdb # 28: usage_00180.pdb # 29: usage_00186.pdb # 30: usage_00201.pdb # 31: usage_00204.pdb # 32: usage_00214.pdb # 33: usage_00215.pdb # 34: usage_00216.pdb # 35: usage_00217.pdb # 36: usage_00218.pdb # # Length: 116 # Identity: 22/116 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/116 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/116 ( 12.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 -IVITQSPKFMSTSVGDRVSITCKASQ-DV----STAVAWFQQKPGQSPKLLIYSASYRY 54 usage_00022.pdb 1 DIQMTQSPILLSASVGDRVTITCRASQ-DV----NTAVAWYQQRTNGSPRLLIYSASFLY 55 usage_00024.pdb 1 DIVLTQSPASLSASVGETVTITCRASG-NI----HNYLAWYQQKQGKSPQLLVYYTTTLA 55 usage_00025.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 53 usage_00026.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 54 usage_00027.pdb 1 -IVMTQSPSSLSASVGDRVTITCRASQ-NI----NNYLHWYQHEPGKAPKLLIYAASNLQ 54 usage_00029.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQ-SI----SSYLNWYQQKPGKAPKLLIYAASSLQ 53 usage_00040.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-DV----NTAVAWYQQKPGKAPKLLIYSASFLE 54 usage_00041.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-DV----NTAVAWYQQKPGKAPKLLIYSASFLE 54 usage_00042.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 55 usage_00043.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 53 usage_00044.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-VI----RRSLAWYQQKPGKAPKLLIYAASNLA 54 usage_00055.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 54 usage_00063.pdb 1 --QMTQSPSSLSASVGDRVTITCRASR-DI----KSYLNWYQQKPGKAPKVLIYYATSLA 53 usage_00066.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQ-DV----STAVAWYQQKPGKAPKLLIYSASFLY 55 usage_00068.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00069.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00073.pdb 1 --TVLTQPPALTVSPGEKLTISCKASE-SV----TSRMHWYQQKPGQQPKLLIYKASNLA 53 usage_00077.pdb 1 DIVMTQSQKFMSTSLGNRVSVTCKASQ-NV----GTNVAWFQQKPGQSPKTLIYSASYRY 55 usage_00082.pdb 1 DVVMTQTHKFMSTSVGDRVSITCKASQ-DV----SGAVAWYQQKSGQSPKLLISMASQRY 55 usage_00083.pdb 1 DVVMTQTHKFMSTSVGDRVSITCKASQ-DV----SGAVAWYQQKSGQSPKLLISMASQRY 55 usage_00103.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 55 usage_00124.pdb 1 --QMTQSPASLSASVGETVTITCRASG-NI----HNYLSWFQQKQGKSPQLLVYSAKTLA 53 usage_00126.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 55 usage_00134.pdb 1 --QMTQSPSSLSASVGDRVTITCRASQ-SI----SSYLNWYQQKPGKAPKLLIYAASSLQ 53 usage_00173.pdb 1 --QMTQSPASLSASVGETVTITCRASG-NI----HNYLAWYQQKQGKSPQLLVYYTTTLA 53 usage_00174.pdb 1 -IQLTQSPSSLSASVGDRVTITCSASQ-DI----SNYLNWYQQKPGKAPKVLIYFTSSLH 54 usage_00180.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-DV----NTAVAWYQQKPGKAPKLLIYSASFLE 54 usage_00186.pdb 1 --QMTQSPSSVSASVGDRVTITCRASQ-GI----SNWLNWYQQKPGKAPKLLIYAASSLQ 53 usage_00201.pdb 1 DIQMTQSPSSLSASVGDRVTITCRASQDI-PRSISGYVAWYQQKPGKAPKLLIYWGSYLY 59 usage_00204.pdb 1 DIQMTQSPSSLSASVGDRVTITCSASS-SV----T-YMYWYQQKPGKAPKLLIYDTSNLA 54 usage_00214.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00215.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00216.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00217.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 usage_00218.pdb 1 -IQMTQSPSSLSASVGDRVTITCRASQ-SV----SSAVAWYQQKPGKAPKLLIYSASSLY 54 tq s S G v itC AS W Qq g P L usage_00018.pdb 55 TGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPWTFGGG-TKLEIKRA- 108 usage_00022.pdb 56 SGVPSRFSGSRSGTDFTLTISSLQPEDIADYYCQQHYTTPPTFGAG-TKVEI---- 106 usage_00024.pdb 56 DGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGG-TKLEI---- 106 usage_00025.pdb 54 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQG-TKVEI---- 104 usage_00026.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQG-TKVEIKRT- 108 usage_00027.pdb 55 GGVTSRFSGSGSGTDFTLTISTLQPEDFATYYCLQTHAYPLTFGGG-TKVDIKRAA 109 usage_00029.pdb 54 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSIPLTFGQG-TRLEIKRT- 107 usage_00040.pdb 55 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQG-TKVEI---- 105 usage_00041.pdb 55 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQG-TKVEIKRT- 108 usage_00042.pdb 56 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQG-TKVEIKRT- 109 usage_00043.pdb 54 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQG-TKVEIKRT- 107 usage_00044.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTSPLTFGQG-TKVEIKRT- 108 usage_00055.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRITPPTFGQG-TKVEI---- 105 usage_00063.pdb 54 EGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCLQHGESPWTFGQG-TKVEIKRT- 107 usage_00066.pdb 56 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYTTATTFGQG-TKVEIKRT- 109 usage_00068.pdb 55 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYSSPFTFGQGTKVEIKRT- 109 usage_00069.pdb 55 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYSSPFTFGQ-GTKVEI--- 106 usage_00073.pdb 54 SGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAG-TKLELKRA- 107 usage_00077.pdb 56 SGVPDRFTGSGSGTDFTLTINNVQSEDLAEYFCQQYNSYPYTFGGG-TKLEIKRA- 109 usage_00082.pdb 56 TGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYAIPLTFGAG-TKLEL---- 106 usage_00083.pdb 56 TGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYAIPLTFGAG-TKLEL---- 106 usage_00103.pdb 56 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQWWWWPSTFGQG-TKVEIKRT- 109 usage_00124.pdb 54 DGVPSRFSGSGSGTQYSLKINSLQPEDFGTYYCQHFWSSIYTFGGG-TKLEIKRA- 107 usage_00126.pdb 56 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQG-TKVEI---- 106 usage_00134.pdb 54 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGQG-TKVEIKRT- 107 usage_00173.pdb 54 DGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGG-TKLELKRA- 107 usage_00174.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQG-TKVEIKRT- 108 usage_00180.pdb 55 SGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQG-TKVEI---- 105 usage_00186.pdb 54 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSDDPTFGQGT-KVEIK-RT- 106 usage_00201.pdb 60 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQG-TKVEI---- 110 usage_00204.pdb 55 SGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQWSSHIFTFGQG-TKVEIKRT- 108 usage_00214.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYFYWPITFGQG-TKVEI---- 105 usage_00215.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHQYNSLIFGQG-TKVEIKRT- 108 usage_00216.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHQYNSLIFGQG-TKVEI---- 105 usage_00217.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHQYNSLIFGQG-TKVEI---- 105 usage_00218.pdb 55 SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHQYNSLIFGQG-TKVEI---- 105 GVp RF GS SGT I q eD Y C #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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