################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:24:38 2021 # Report_file: c_1287_9.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00151.pdb # 2: usage_00218.pdb # 3: usage_00339.pdb # 4: usage_00435.pdb # 5: usage_00478.pdb # 6: usage_00481.pdb # # Length: 69 # Identity: 19/ 69 ( 27.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 69 ( 39.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 69 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00151.pdb 1 --------LVDLAGSEN------I------------NQSLLTLGRVITALVERTPHVPYR 34 usage_00218.pdb 1 --------LVDLAGSE---NIGRI------------NQSLLTLGRVITALVERTPHVPYR 37 usage_00339.pdb 1 ----------L-AGSEKVSKTG--AEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYR 47 usage_00435.pdb 1 --------LVDLAGSEN-------------------NQSLLTLGRVITALVERTPHVPYR 33 usage_00478.pdb 1 EISVGSINLVDLAGSESP------------------NRSLSELTNVILALLQKQDHIPYR 42 usage_00481.pdb 1 --------LVDLAGSEN------I------------NQSLLTLGRVITALVERTPHVPYR 34 d AGSE N SL Lg VI AL e hvPYR usage_00151.pdb 35 ESKLTRIL- 42 usage_00218.pdb 38 ESKLTRIL- 45 usage_00339.pdb 48 DSKMTRILQ 56 usage_00435.pdb 34 ESKLTRIL- 41 usage_00478.pdb 43 NSKLTHLL- 50 usage_00481.pdb 35 ESKLTRIL- 42 SKlTriL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################