################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:07:48 2021 # Report_file: c_1117_58.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00171.pdb # 2: usage_00327.pdb # 3: usage_00685.pdb # 4: usage_00986.pdb # # Length: 106 # Identity: 9/106 ( 8.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/106 ( 68.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 33/106 ( 31.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00171.pdb 1 ---LVDDAIVVVENVERVMAEEGLPPKEATR------KSMGQIQGALVGIAMVLSAVFVP 51 usage_00327.pdb 1 --LLVDDAIVVVENVERVMAEEGLPPKEATR------KSMGQIQGALVGIAMVLSAVFVP 52 usage_00685.pdb 1 IGLLVDDAIVVVENVERVMAEEGLPPKEATR------KSMGQIQGALVGIAMVLSAVFVP 54 usage_00986.pdb 1 --VDWLLKTAGVIVELIVNFVAS--------LPASAAAQFERIAAGLSGDLEAARQVHEA 50 lvddaivvVenverVmaeeg ksmgqIqgaLvGiamvlsaVfvp usage_00171.pdb 52 MAF-FG---GSTGAIYRQFSITIVSAMALSVLVALI---------- 83 usage_00327.pdb 53 MAF-FG---GSTGAIYRQFSITIVSAMALSVLVALILTPALCAT-- 92 usage_00685.pdb 55 MAF-FG---GSTGAIYRQFSITIVSAMALSVLVALILTPALCAT-- 94 usage_00986.pdb 51 LLEEA-KNDPA-AAGSLLLRFTELQTRVIALLTRVGLLVDDILKSA 94 maf f gs gAiyrqfsiTivsamalsvLvali #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################