################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:34:35 2021 # Report_file: c_0598_2.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00076.pdb # 2: usage_00077.pdb # 3: usage_00078.pdb # 4: usage_00079.pdb # 5: usage_00122.pdb # 6: usage_00162.pdb # 7: usage_00163.pdb # 8: usage_00167.pdb # 9: usage_00178.pdb # 10: usage_00184.pdb # 11: usage_00194.pdb # 12: usage_00296.pdb # 13: usage_00297.pdb # 14: usage_00298.pdb # 15: usage_00299.pdb # 16: usage_00310.pdb # # Length: 68 # Identity: 10/ 68 ( 14.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 20/ 68 ( 29.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 68 ( 13.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00076.pdb 1 Q--IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAIFDGLTDKKTGRPLI 57 usage_00077.pdb 1 Q--IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAIFDGLTDKKTGRPLI 57 usage_00078.pdb 1 Q--IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAIFDGLTDKKTGRPLI 57 usage_00079.pdb 1 ---IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAIFDGLTDKKTGRPLI 56 usage_00122.pdb 1 ---AIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAV-HGPSGLVNATY-KDGTPIV 55 usage_00162.pdb 1 K--VFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLI 58 usage_00163.pdb 1 K--VFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLI 58 usage_00167.pdb 1 ---AIIFAGGHGTMWDFPNNANIHSKVLDIYAKNGVIGAI-HGVAALINVKD-NNGQNII 55 usage_00178.pdb 1 K--VFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAI-HGPLLFDGLIDIKTTRPLI 57 usage_00184.pdb 1 Q--IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLI 58 usage_00194.pdb 1 ---LMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHD-ENGDSVI 56 usage_00296.pdb 1 Q--IFMASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAMFDGLTDKKTGRPLI 57 usage_00297.pdb 1 Q--IFMASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPAMFDGLTDKKTGRPLI 57 usage_00298.pdb 1 -QI--FASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPA-FDGLTDKKTGRPLI 55 usage_00299.pdb 1 -QI--FASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAV-HGPA-FDGLTDKKTGRPLI 55 usage_00310.pdb 1 ---IFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLI 57 GHG D P lq y ggv A HGp d i usage_00076.pdb 58 EGKSITGF 65 usage_00077.pdb 58 EGKSITGF 65 usage_00078.pdb 58 EGKSITGF 65 usage_00079.pdb 57 EGKSITGF 64 usage_00122.pdb 56 KGKTVTSF 63 usage_00162.pdb 59 EGKAITGF 66 usage_00163.pdb 59 EGKAITGF 66 usage_00167.pdb 56 RDKEVTGF 63 usage_00178.pdb 58 EGKAITG- 64 usage_00184.pdb 59 EGKSITGF 66 usage_00194.pdb 57 KDKTVTGF 64 usage_00296.pdb 58 EGKSITGF 65 usage_00297.pdb 58 EGKSITGF 65 usage_00298.pdb 56 EGKSITGF 63 usage_00299.pdb 56 EGKSITGF 63 usage_00310.pdb 58 KGKKITG- 64 K Tg #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################