################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:34 2021 # Report_file: c_0782_36.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00104.pdb # 2: usage_00111.pdb # 3: usage_00112.pdb # 4: usage_00153.pdb # 5: usage_00195.pdb # 6: usage_00209.pdb # 7: usage_00287.pdb # 8: usage_00316.pdb # 9: usage_00325.pdb # # Length: 86 # Identity: 4/ 86 ( 4.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 6/ 86 ( 7.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 86 ( 44.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00104.pdb 1 KESF--AATAPT--GVGKTSFGLAMSLFLAL-----KGK-RCYVIFPTSLLVIQAAETIR 50 usage_00111.pdb 1 --DV--IAQAQS--GTG-TATFAISILQQIE--L-DL-ATQALVLAPTRELAQQIQ-VVM 48 usage_00112.pdb 1 --DV--IAQAQS--GTG-TATFAISILQQIE--L-DL-ATQALVLAPTRELAQQIQ-VVM 48 usage_00153.pdb 1 --PR--NMIAQSQSGTGKTAAFSLTMLTRVN--P-EDASPQAICLAPSRELARQTLEVVQ 53 usage_00195.pdb 1 -DVI--AQAQ-S--GTGKTATFAISILQQIE--L-DLKATQALVLAPTRELAQQIQKVVM 51 usage_00209.pdb 1 ----GLTVVGPP--GTGKTDVAVQIISNIYHNFP-EQ---RTLIVTHSNQALNQLFEKIA 50 usage_00287.pdb 1 --DV--IAQAQS--GTGKTATFAISILQQIE--L-DLKATQALVLAPTRELAQQIQKVVM 51 usage_00316.pdb 1 --DV--LCQAKS--GMGKTAVFVLATLQQLE--P-VTGQVSVLVMCHTRELAFQISKEYE 51 usage_00325.pdb 1 ------LASAPT--GSGKTLAFSIPILMQLK--QPANKGFRALIISPTRELASQIHRELI 50 G G T l l Q usage_00104.pdb 51 KYAEK--AG-VGTENLIGYY---H-- 68 usage_00111.pdb 49 ALGDY--MG-AS--------CHA--- 60 usage_00112.pdb 49 ALGDY--MG-AS--------CHA--- 60 usage_00153.pdb 54 EMGKF--TK-IT--------SQLI-- 66 usage_00195.pdb 52 ALGDY--MG-AS--------CHA--- 63 usage_00209.pdb 51 LDI--DERH-LL--------RLG--- 62 usage_00287.pdb 52 ALGDY--MG-AS--------CHA--- 63 usage_00316.pdb 52 RFSKY--MPNVK--------VAVFFG 67 usage_00325.pdb 51 KISEG--TG-FR--------IHM--- 62 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################