################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:50:20 2021 # Report_file: c_0610_54.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00015.pdb # 2: usage_00084.pdb # 3: usage_00164.pdb # 4: usage_00377.pdb # 5: usage_00404.pdb # 6: usage_00405.pdb # 7: usage_00595.pdb # 8: usage_00596.pdb # 9: usage_00597.pdb # 10: usage_00606.pdb # 11: usage_00686.pdb # 12: usage_00688.pdb # # Length: 89 # Identity: 4/ 89 ( 4.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 89 ( 11.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 89 ( 24.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00015.pdb 1 PGSAALTAKIIKRAG----APEGSLINLY-PS-YDQLADIIADPRIQGVALTGSERGGSA 54 usage_00084.pdb 1 -LTALHVASLIKEAG----FPPGVVNIVP-GYGPTAGAAISSHMDVDKVAFTGSTEVGKM 54 usage_00164.pdb 1 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQ-RALGQALVSHPEIKAVGFTGSVGGGRA 59 usage_00377.pdb 1 --TALKLAEIYTEAG----VPDGVFNVLT-GSGREVGQWLTEHPLIEKISFTGGTSTGKK 53 usage_00404.pdb 1 -LATTELGRIAKEAG----LPDGVLNVIN-GTGSVVGQTLCESPITKMITMTGSTVAGKQ 54 usage_00405.pdb 1 -LATTELGRIAKEAG----LPDGVLNVIN-GTGSVVGQTLCESPITKMITMTGSTVAGKQ 54 usage_00595.pdb 1 PLTALKFAELTLKAG----IPKGVVNILP-GSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 55 usage_00596.pdb 1 -LTALKFAELTLKAG----IPKGVVNILP-GSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 54 usage_00597.pdb 1 PLTALKFAELTLKAG----IPKGVVNILP-GSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 55 usage_00606.pdb 1 PLSTLRIVELMTEVG----FPKGVVNVVP-GYGHTAGQALAEHLDVGKIAFTGSTATGRR 55 usage_00686.pdb 1 --STLRIVELMAEVG----FPAGVVNIVP-GYGHTAGQRLAEHPGVGKIAFTGSTATGRR 53 usage_00688.pdb 1 PLTALKFAELTLKAG----IPKGVVNILP-GSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 55 g P g g TGs G usage_00015.pdb 55 VAEAAGKNL-KKS-TELG-GN-DAFIVL- 78 usage_00084.pdb 55 IQEAAAKSNLKRVTLEL------------ 71 usage_00164.pdb 60 LFNLAHERPEPIPFYGELGAI-NPTFIFP 87 usage_00377.pdb 54 VMASASSSSLKEVTMELG-GK-SPLIIF- 79 usage_00404.pdb 55 IYKTSAEYM-TPVMLELG-GK-------- 73 usage_00405.pdb 55 IYKTSAEYM-TPVMLELG-GK-------- 73 usage_00595.pdb 56 IMKSCALSNVKKVSLELG-GK-SPLIIF- 81 usage_00596.pdb 55 IMKSCALSNVKKVSLELG-GK-SPLIIF- 80 usage_00597.pdb 56 IMKSCALSNVKKVSLELG-GK-SPLIIF- 81 usage_00606.pdb 56 IVEASKSNL-KRIQLELG-GKGANIV-F- 80 usage_00686.pdb 54 IVEASQGNL-KRVQLELG-GK-------- 72 usage_00688.pdb 56 IMKSCALSNVKKVSLELG-GK-SPLIIF- 81 el #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################