################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:39 2021 # Report_file: c_1442_935.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_01826.pdb # 2: usage_02876.pdb # 3: usage_03245.pdb # 4: usage_03399.pdb # 5: usage_03636.pdb # 6: usage_04016.pdb # 7: usage_04981.pdb # 8: usage_08025.pdb # 9: usage_08051.pdb # 10: usage_08294.pdb # 11: usage_08295.pdb # 12: usage_13365.pdb # # Length: 24 # Identity: 0/ 24 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 24 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 24 ( 58.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01826.pdb 1 PVVYFDI--SIGQTPAGRITME-- 20 usage_02876.pdb 1 --DMTIT--GGGKRQIVVR----- 15 usage_03245.pdb 1 SKVFFDI--TIGGKASGRIVME-- 20 usage_03399.pdb 1 SKVFFDI--TIGGKASGRIVME-- 20 usage_03636.pdb 1 SKVFFDI--TIGGKASGRIVME-- 20 usage_04016.pdb 1 PKVFFDM--TVGGQPAGRIVME-- 20 usage_04981.pdb 1 KKIVVKV--SIDGIQSLSFDIE-- 20 usage_08025.pdb 1 PRVFFDV--DIGGERVGRIVLE-- 20 usage_08051.pdb 1 PRVFFDV--DIGGERVGRIVLE-- 20 usage_08294.pdb 1 SKVFFDI--TIGGKASGRIVME-- 20 usage_08295.pdb 1 SKVFFDI--TIGGKASGRIVME-- 20 usage_13365.pdb 1 -------HEIFNDATIAKVPIYYE 17 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################