################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:56:49 2021 # Report_file: c_0101_8.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00002.pdb # 2: usage_00141.pdb # 3: usage_00142.pdb # 4: usage_00143.pdb # 5: usage_00144.pdb # 6: usage_00145.pdb # 7: usage_00146.pdb # 8: usage_00147.pdb # 9: usage_00162.pdb # 10: usage_00163.pdb # 11: usage_00186.pdb # 12: usage_00187.pdb # 13: usage_00235.pdb # 14: usage_00236.pdb # 15: usage_00237.pdb # 16: usage_00245.pdb # 17: usage_00259.pdb # 18: usage_00263.pdb # # Length: 225 # Identity: 197/225 ( 87.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 202/225 ( 89.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/225 ( 9.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 60 usage_00141.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 59 usage_00142.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 60 usage_00143.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 59 usage_00144.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 60 usage_00145.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 59 usage_00146.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 60 usage_00147.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 59 usage_00162.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 59 usage_00163.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 60 usage_00186.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 59 usage_00187.pdb 1 --KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 58 usage_00235.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 59 usage_00236.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 60 usage_00237.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGS 60 usage_00245.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 59 usage_00259.pdb 1 -PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 59 usage_00263.pdb 1 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 60 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI QLMPFGCLLDYVREHKDNIGS usage_00002.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT-DFGLAKL-----EKYH 114 usage_00141.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AE-E-- 114 usage_00142.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AE-E-- 115 usage_00143.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AE-E-- 114 usage_00144.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AE---- 114 usage_00145.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AE-E-- 114 usage_00146.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AE---- 114 usage_00147.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AE---- 113 usage_00162.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--A-EE-- 114 usage_00163.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYH 119 usage_00186.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------- 110 usage_00187.pdb 59 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL---------- 108 usage_00235.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLE------YH 113 usage_00236.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG------AE 114 usage_00237.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AE-E-- 115 usage_00245.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL---------- 109 usage_00259.pdb 60 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--------- 110 usage_00263.pdb 61 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL---------- 110 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT fg akl usage_00002.pdb 115 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 174 usage_00141.pdb 115 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 169 usage_00142.pdb 116 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 170 usage_00143.pdb 115 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 169 usage_00144.pdb 115 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 169 usage_00145.pdb 115 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 169 usage_00146.pdb 115 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 169 usage_00147.pdb 114 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 168 usage_00162.pdb 115 ----KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 170 usage_00163.pdb 120 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 179 usage_00186.pdb 111 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 165 usage_00187.pdb 109 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 163 usage_00235.pdb 114 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 173 usage_00236.pdb 115 YHAGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 174 usage_00237.pdb 116 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 170 usage_00245.pdb 110 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 164 usage_00259.pdb 111 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 165 usage_00263.pdb 111 -----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 165 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG usage_00002.pdb 175 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD- 218 usage_00141.pdb 170 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 212 usage_00142.pdb 171 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 213 usage_00143.pdb 170 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 212 usage_00144.pdb 170 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 212 usage_00145.pdb 170 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 212 usage_00146.pdb 170 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 212 usage_00147.pdb 169 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 211 usage_00162.pdb 171 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 213 usage_00163.pdb 180 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 222 usage_00186.pdb 166 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 208 usage_00187.pdb 164 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 206 usage_00235.pdb 174 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 216 usage_00236.pdb 175 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 217 usage_00237.pdb 171 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA--- 212 usage_00245.pdb 165 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 209 usage_00259.pdb 166 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 208 usage_00263.pdb 166 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR-- 208 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################