################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:16 2021 # Report_file: c_0487_35.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00023.pdb # 2: usage_00075.pdb # 3: usage_00088.pdb # 4: usage_00099.pdb # 5: usage_00117.pdb # 6: usage_00237.pdb # # Length: 111 # Identity: 4/111 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/111 ( 9.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 27/111 ( 24.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00023.pdb 1 RIGYIVA-NKDF-KRVAAFST-PW-AVNALAIEAAKFILIH----P--AQF-TLPIRKWQ 49 usage_00075.pdb 1 RVGCLITRNEELISHA-KL-AQGRLAPPLLEQIGSVGLLNLD---D--SFFDF-VRETYR 52 usage_00088.pdb 1 RVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLA---RREGFYEA-LREGYR 55 usage_00099.pdb 1 -IGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASR--AFVEM-AREAYR 55 usage_00117.pdb 1 -IGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---D--AWVAA-LRNSLR 52 usage_00237.pdb 1 RVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLA---RREGFYEA-LREGYR 55 G e q L r r usage_00023.pdb 50 RNTVDFITALNRLDGVE-VHPS-GTTFFLLRLK---KGTAAELKKY----- 90 usage_00075.pdb 53 ERVETVLKKLEEHG-LKRFTKPSGAFYITAELP---VEDAEEFARW----- 94 usage_00088.pdb 56 RRRDLLAGGLRAMG-LR-VYVPEGTYFLMAELP---GWDAFRLVEE----- 96 usage_00099.pdb 56 RRRDLLLEGLTALG-LK-AVRPSGAFYVLMDTSPIA-PDEVRAAERLLEAG 103 usage_00117.pdb 53 ARRDRLAAGLTEIG-FA-VHDSYGTYFLCADPRPLGYDDSTEFCAA----- 96 usage_00237.pdb 56 RRRDLLAGGLRAMG-LR-VYVPEGTYFLMAELP---GWDAFRLVEEAR--- 98 r L g G d #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################