################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:41:27 2021 # Report_file: c_0051_3.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00032.pdb # 2: usage_00039.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00042.pdb # 6: usage_00055.pdb # 7: usage_00056.pdb # 8: usage_00057.pdb # 9: usage_00058.pdb # 10: usage_00059.pdb # 11: usage_00066.pdb # 12: usage_00079.pdb # # Length: 227 # Identity: 56/227 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 173/227 ( 76.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/227 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00032.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHEGSSV-G 58 usage_00039.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSH---SV-G 55 usage_00040.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHE--SV-G 56 usage_00041.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHEGSSV-G 58 usage_00042.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHE--GV-G 56 usage_00055.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHEGSSV-G 58 usage_00056.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSH---SV-G 55 usage_00057.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHEGSSV-G 58 usage_00058.pdb 1 -KLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHEGSSV-G 57 usage_00059.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHES-SV-G 57 usage_00066.pdb 1 DKLRTKLVWQALGLPISPYVALNRQQ-FETLSPEELVACVAKLGLPLIVKPSHE--SV-G 56 usage_00079.pdb 1 --NISKKILRYEGIETPDWIELTKEDL--------NFDELDKLGFPLVVKPNSGG-SSVG 49 lrtKlvwqalGlpispyvaLnrqq lvacvaKLGlPLiVKPsh sv G usage_00032.pdb 59 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPG------ 112 usage_00039.pdb 56 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPG------ 109 usage_00040.pdb 57 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPP------- 109 usage_00041.pdb 59 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 113 usage_00042.pdb 57 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPG------ 110 usage_00055.pdb 59 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 113 usage_00056.pdb 56 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 110 usage_00057.pdb 59 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 113 usage_00058.pdb 58 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 112 usage_00059.pdb 58 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPPGV----- 112 usage_00066.pdb 57 MSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILGDEVLPSIRIQPP------- 109 usage_00079.pdb 50 VKIVYDKDELIS-LETVFEWDSEVVIEKYIKGEEITCSIFDGKQLPIISIRHA-AEFFDY 107 mskVdhasELqk LveaFqhDSdVlIEKwlsGpEfTvaIlgdevLPsIrIqpp usage_00032.pdb 113 --------------KTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 157 usage_00039.pdb 110 -------------VKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 155 usage_00040.pdb 110 ---------------TQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 153 usage_00041.pdb 114 --FYDYDAKYLS-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 169 usage_00042.pdb 111 -------------DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 156 usage_00055.pdb 114 --FYDYDAKYLS-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 169 usage_00056.pdb 111 --FY-------S-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 159 usage_00057.pdb 114 --FYDYDAKYLS-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 169 usage_00058.pdb 113 --FYDYDAKYLS-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 168 usage_00059.pdb 113 --FYDYDAK--S-DKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 166 usage_00066.pdb 110 ---------------TQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVD-VMQDRDG 153 usage_00079.pdb 108 NAKY-------DDASTIEEVI-ELPAELKERVNKASLACYKALKCSVYARVDV----KDG 155 Tqyfcp gLsdEseqqlaalaLqaYhALdCSgwgRVD rDG usage_00032.pdb 158 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 197 usage_00039.pdb 156 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 195 usage_00040.pdb 154 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 193 usage_00041.pdb 170 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 209 usage_00042.pdb 157 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 196 usage_00055.pdb 170 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---LA--- 210 usage_00056.pdb 160 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM-------- 198 usage_00057.pdb 170 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 209 usage_00058.pdb 169 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 208 usage_00059.pdb 167 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 206 usage_00066.pdb 154 HFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILM---L---- 193 usage_00079.pdb 156 IPYVEVNT-LP-GTQASLLPKSADAAGIHYSKLLDIIETSLRVRKEE 200 hfYllevn sP mTshSLvPmaArqyGlsfSqLvarIlm #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################