################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:54 2021 # Report_file: c_1200_293.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00313.pdb # 2: usage_02376.pdb # 3: usage_03870.pdb # 4: usage_04506.pdb # 5: usage_04507.pdb # 6: usage_04753.pdb # # Length: 78 # Identity: 0/ 78 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 78 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 65/ 78 ( 83.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00313.pdb 1 -------------NKIHFINVQ---E---------GGSDAIILES--------------- 20 usage_02376.pdb 1 -HIILNSMHKYQPRLHIVKADENNG-------FGSK-NTAFCTHV--------------- 36 usage_03870.pdb 1 --------------YTEFQEF--------------T-NRLRIHGII--EDAPERFGIKGA 29 usage_04506.pdb 1 QMIVLQSLHKYQPRLHIVEVND---G-EPEAACS---ASNTHVFT--------------- 38 usage_04507.pdb 1 QMIVLQSLHKYQPRLHIVEVND---G-EPEA-ACSA-S-NTHVFT--------------- 38 usage_04753.pdb 1 --------------AYAYRKLH---IQ------------RPIPSAFCF------------ 19 usage_00313.pdb 21 NGHFAMVD---------- 28 usage_02376.pdb 37 F-------P--------- 38 usage_03870.pdb 30 -HHTINLD---------- 36 usage_04506.pdb 39 F-------QE-------- 41 usage_04507.pdb 39 F-------QE-------- 41 usage_04753.pdb 20 L-------SHDHGRTWAR 30 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################