################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:50 2021 # Report_file: c_1142_29.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00211.pdb # 2: usage_00902.pdb # 3: usage_00904.pdb # 4: usage_00908.pdb # 5: usage_02247.pdb # 6: usage_02287.pdb # # Length: 63 # Identity: 0/ 63 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 63 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/ 63 ( 79.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00211.pdb 1 MGRYN-----VFNFQNV--------GGKYSYLKVGHWAET-------LS----------- 29 usage_00902.pdb 1 ----V-----WYINKRT--------SDYNIVH-LINLLGNDNQWRNT-A----SQPSFQT 37 usage_00904.pdb 1 ----V-----WYINKRT--------SDYNIVH-LINLLGNDNQWRNT-A----SQPSFQT 37 usage_00908.pdb 1 ----V-----WYINKRT--------SDYNIVH-LINLLGNDNQWRNT-A----SQPSFQT 37 usage_02247.pdb 1 -----SINFGRVTIQRKGGDNGRETANMLQFK--ID------------------------ 29 usage_02287.pdb 1 ----------TVHTQVS-----------DTLL-LTWSNP--YPPDNY-LYNHLTYAVNIW 35 usage_00211.pdb 30 -LD 31 usage_00902.pdb 38 N-- 38 usage_00904.pdb 38 N-- 38 usage_00908.pdb 38 N-- 38 usage_02247.pdb --- usage_02287.pdb 36 S-- 36 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################