################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:47 2021 # Report_file: c_1485_102.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00202.pdb # 2: usage_00715.pdb # 3: usage_00716.pdb # 4: usage_00717.pdb # 5: usage_00895.pdb # 6: usage_00934.pdb # 7: usage_00982.pdb # 8: usage_00983.pdb # 9: usage_01548.pdb # 10: usage_01549.pdb # 11: usage_01550.pdb # 12: usage_01551.pdb # 13: usage_01552.pdb # 14: usage_01553.pdb # 15: usage_01554.pdb # 16: usage_01555.pdb # 17: usage_01556.pdb # 18: usage_01557.pdb # 19: usage_01558.pdb # 20: usage_01559.pdb # 21: usage_01560.pdb # # Length: 28 # Identity: 1/ 28 ( 3.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 28 ( 57.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 28 ( 42.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00202.pdb 1 VKALKQVAGSLKLFLAQYREVAAFA--- 25 usage_00715.pdb 1 VKALKQVAGSLKLFLAQYREVAAFAQFG 28 usage_00716.pdb 1 -KALKQVAGSLKLFLAQYREVAAFA--- 24 usage_00717.pdb 1 VKALKQVAGSLKLFLAQYREVAAFA--- 25 usage_00895.pdb 1 VKALKQVAGSLKLFLAQYREV------- 21 usage_00934.pdb 1 -MTLCISVLLALTVFLLLISKIVPP--- 24 usage_00982.pdb 1 VKALKQVAGSLKLFLAQYREV------- 21 usage_00983.pdb 1 VKALKQVAGSLKLFLAQYREVAAFAQ-- 26 usage_01548.pdb 1 -KALKQVAGSLKLFLAQYREVAAFA--- 24 usage_01549.pdb 1 -KALKQVAGSLKLFLAQYREVAAFA--- 24 usage_01550.pdb 1 -KALKQVAGSLKLFLAQ----------- 16 usage_01551.pdb 1 VKALKQVAGSLKLFLAQYREVAASA--- 25 usage_01552.pdb 1 VKALKQVAGSLKLFLAQYREVAASA--- 25 usage_01553.pdb 1 VKALKQVAGSLKLFLAQYREV------- 21 usage_01554.pdb 1 -KALKQVAGSLKLFLAQYREVAAFAQ-- 25 usage_01555.pdb 1 -KALKQVAGSLKLFLAQYREV------- 20 usage_01556.pdb 1 -KALKQVAGSLKLFLAQYREVAAFA--- 24 usage_01557.pdb 1 VKALKQVAGSLKLFLAQYREVAAFAQ-- 26 usage_01558.pdb 1 VKALKQVAGSLKLFLAQYREVAAFA--- 25 usage_01559.pdb 1 VKALKQVAGSLKLFLAQYREVAAF---- 24 usage_01560.pdb 1 VKALKQVAGSLKLFLAQYREVAAFA--- 25 kaLkqvagslklflaq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################