################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:12:20 2021 # Report_file: c_1200_332.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00646.pdb # 2: usage_00647.pdb # 3: usage_00648.pdb # 4: usage_01113.pdb # 5: usage_01556.pdb # 6: usage_01557.pdb # 7: usage_03657.pdb # 8: usage_03658.pdb # 9: usage_03659.pdb # 10: usage_03660.pdb # 11: usage_03662.pdb # 12: usage_04405.pdb # # Length: 27 # Identity: 12/ 27 ( 44.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 27 ( 48.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 27 ( 11.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00646.pdb 1 TAITGDPRVYGRVYIATNGRGIVYGEP 27 usage_00647.pdb 1 TAITGDPRVYGRVYIATNGRGIVYGEP 27 usage_00648.pdb 1 TAITGDPRVYGRVYIATNGRGIVYGEP 27 usage_01113.pdb 1 -MIEADPKVYGRVYLGTNGRGIVYA-- 24 usage_01556.pdb 1 -MIEADPKVYGRVYLGTNGRGIVYA-- 24 usage_01557.pdb 1 -MIEADPKVYGRVYLGTNGRGIVYA-- 24 usage_03657.pdb 1 EAISGDPRIYGRLYLGTNGRGLLYGDS 27 usage_03658.pdb 1 EAISGDPRIYGRLYLGTNGRGLLYGDS 27 usage_03659.pdb 1 EAISGDPRIYGRLYLGTNGRGLLYGDS 27 usage_03660.pdb 1 EAISGDPRIYGRLYLGTNGRGLLYGDS 27 usage_03662.pdb 1 EAISGDPRIYGRLYLGTNGRGLLYGDS 27 usage_04405.pdb 1 AAITGDPRVYGRVYVSTNGRGIQVGET 27 I DP YGR Y TNGRG y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################