################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:52:58 2021 # Report_file: c_0261_23.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00080.pdb # 4: usage_00081.pdb # 5: usage_00101.pdb # 6: usage_00102.pdb # 7: usage_00103.pdb # 8: usage_00134.pdb # # Length: 138 # Identity: 8/138 ( 5.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/138 ( 15.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/138 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 TEADIKQTCDEAKK--FNTASVCVNSYWIPFVTEQLK---GTDVNPIAVVGFPLGAMATE 55 usage_00019.pdb 1 TEADIKQTCDEAKK--FNTASVCVNSYWIPFVTEQLK---GTDVNPIAVVGFPLGAMATE 55 usage_00080.pdb 1 TLEEVAKAAEEALE--YGFYGLCIPPSYVAWVRARYP---HAPFRLVTVVGFPLGYQEKE 55 usage_00081.pdb 1 TVDEAVAGARKAEE--LGVAAYCVNPIYAPVVRPLL-----RKVKLCVVADFPFGALPTA 53 usage_00101.pdb 1 SEKEIEEFVLKSEE--LGIYAVCVNPYHVKLASSIA-----KKVKVCCVIGFPLGLNKTS 53 usage_00102.pdb 1 -QEQVEKILAEAKE--YDFASVCVNPTWVALAAESLK---DSDVKVCTVIGFPLGANTPA 54 usage_00103.pdb 1 -QEQVEKILAEAKE--YDFASVCVNPTWVALAAESLK---DSDVKVCTVIGFPLGANTPA 54 usage_00134.pdb 1 -DEKVIALCHQAKTPVGTTDAIYIYPRFIPIARKTLKEQGTPEIRIWTSTNFPHGNDDID 59 a c v FP G usage_00018.pdb 56 SEIFEATTAIDQGAEEIDMVLNVGELKGGNDEKVLADIQGLADAVHAKGKILKVILENAL 115 usage_00019.pdb 56 SKIFEATTAIDQGAEEIDMVLNVGELKGGNDEKVLADIQGLADAVHAKGKILKVILENAL 115 usage_00080.pdb 56 VKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAV-P-QAVLKVILETGY 113 usage_00081.pdb 54 SRIALVSRLAE-VADEIDVVAPIGLVKSRRWAEVRRDLISVVGAA-G-GRVVKVITEEPY 110 usage_00101.pdb 54 VKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRET-P-SAVHKVIVETPY 111 usage_00102.pdb 55 VKAFETKDAISNGADEIDMVINIGALKTGNYDLVLEDIKAVVAAS-G-DKLVKVIIEACL 112 usage_00103.pdb 55 VKAFETKDAISNGADEIDMVINIGALKTGNYDLVLEDIKAVVAAS-G-DKLVKVIIEACL 112 usage_00134.pdb 60 IALAETRAAIAYGADGVAVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLSVIIETGE 119 e a gA e d V k a kVI E usage_00018.pdb 116 L-TKDEIVRACQLSEKAG 132 usage_00019.pdb 116 L-TKDEIVRACQLSEKAG 132 usage_00080.pdb 114 F-SPEEIARLAEAAIRGG 130 usage_00081.pdb 111 L-RDEERYTLYDIIAEAG 127 usage_00101.pdb 112 L-NEEEIKKAVEICIEAG 128 usage_00102.pdb 113 L-TDDEKVKACQLSQEAG 129 usage_00103.pdb 113 L-TDDEKVKACQLSQE-- 127 usage_00134.pdb 120 LKDEALIRKASEISIKAG 137 l e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################