################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:56 2021 # Report_file: c_1186_3.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00004.pdb # 2: usage_00079.pdb # 3: usage_00255.pdb # 4: usage_00420.pdb # 5: usage_00423.pdb # 6: usage_00550.pdb # 7: usage_00614.pdb # 8: usage_00775.pdb # 9: usage_00776.pdb # 10: usage_01643.pdb # 11: usage_01691.pdb # 12: usage_01764.pdb # 13: usage_01813.pdb # 14: usage_01838.pdb # 15: usage_01839.pdb # # Length: 71 # Identity: 13/ 71 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 71 ( 40.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 71 ( 19.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_00079.pdb 1 TYYILSD--ITAFGGIRAAPTGNER--CPLTVVQSRNELDK-GIGTIISSPY----RIRF 51 usage_00255.pdb 1 TYYLLPHIWA-HGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----RSLF 52 usage_00420.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_00423.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_00550.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQY----RSLF 52 usage_00614.pdb 1 TYYLLPQV-WAQGGGVQLAKTGEET--CPLTVVQSPNELSD-GKPIRIESRL----RSAF 52 usage_00775.pdb 1 KYTIVSFS-D--GAGIDVVATGNENPEDPLSIVKSTRN---IMYATSISSEDKTPPQPRN 54 usage_00776.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_01643.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_01691.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_01764.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----RSLF 52 usage_01813.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSQF----LSLF 52 usage_01838.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSRL----RSAF 52 usage_01839.pdb 1 TYYLLPHI-WAHGGGIETAKTGNEP--CPLTVVRSPNEVSK-GEPIRISSRL----RSAF 52 tYy l ggGi a TGnE cPLtvV S ne g IsS f usage_00004.pdb 53 IPRGSLVALGF 63 usage_00079.pdb 52 IAEGHPLSLKF 62 usage_00255.pdb 53 IPRGSLVALGF 63 usage_00420.pdb 53 IPRGSLVALGF 63 usage_00423.pdb 53 IPRGSLVALGF 63 usage_00550.pdb 53 IPRGSLVALGF 63 usage_00614.pdb 53 IPDDDKVRIGF 63 usage_00775.pdb 55 ILENMRLKINF 65 usage_00776.pdb 53 IPRGSLVALGF 63 usage_01643.pdb 53 IPRGSLVALGF 63 usage_01691.pdb 53 IPRGSLVALGF 63 usage_01764.pdb 53 IPRGSLVALGF 63 usage_01813.pdb 53 IPRGSLVALGF 63 usage_01838.pdb 53 IPRGSLVRLGF 63 usage_01839.pdb 53 IPRGSLVRLGF 63 I F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################