################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:25 2021 # Report_file: c_1120_120.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00484.pdb # 2: usage_00502.pdb # 3: usage_00819.pdb # 4: usage_00820.pdb # # Length: 78 # Identity: 2/ 78 ( 2.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 78 ( 29.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/ 78 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00484.pdb 1 -TDREALELALVENLQREDLSPVEEARGYQALLEM-GL-----------TQEEVARRVGK 47 usage_00502.pdb 1 ----------SQEELKE---------MALVEIAHELF-EEHKKPVPFQELLNEIASLLGV 40 usage_00819.pdb 1 IEQEKMREVALIENIQREDLNPLELARSYKELLESYQM-----------TQEELSKIVKK 49 usage_00820.pdb 1 --QEKMREVALIENIQREDLNPLELARSYKELLESYQM-----------TQEELSKIVKK 47 l En qr r y elle tqeE v k usage_00484.pdb 48 ARSTVANAL---RLL-QL 61 usage_00502.pdb 41 KKEELGDRIAQFYTDLNI 58 usage_00819.pdb 50 SRAHVANIM---RL---- 60 usage_00820.pdb 48 SRAHVANIM---RL---- 58 r van rl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################