################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:11 2021 # Report_file: c_0669_98.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00123.pdb # 2: usage_00132.pdb # 3: usage_00133.pdb # 4: usage_00241.pdb # 5: usage_00242.pdb # 6: usage_00243.pdb # 7: usage_00244.pdb # 8: usage_00245.pdb # 9: usage_00246.pdb # 10: usage_00247.pdb # 11: usage_00248.pdb # 12: usage_00249.pdb # 13: usage_00317.pdb # 14: usage_01025.pdb # 15: usage_01546.pdb # 16: usage_01547.pdb # 17: usage_01548.pdb # 18: usage_01549.pdb # # Length: 55 # Identity: 33/ 55 ( 60.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 35/ 55 ( 63.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 55 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00123.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTG----- 48 usage_00132.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIALSSPSSGPKRYDW------- 46 usage_00133.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIFLSSPSSGPKRYDWTG----- 48 usage_00241.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVIKKQTPNKQIWLSSPSSGPKRYDWTG----- 48 usage_00242.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKRTPNKQIWLSSPSSGPKRYDWTG----- 48 usage_00243.pdb 1 ---DVSFGSGVLTVKLGGDLGTYVINKQTPNKAIWLSSPSSGPKRYDW------- 45 usage_00244.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKGTPNKQIWLSSPSSGPKRYDWTG----- 48 usage_00245.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKGTPNKQIWLSSPSSGPKRYD-------- 45 usage_00246.pdb 1 ---DVSFGSGVLTVKLGGDLGTYVINKGTPNKQIWLSSPSSGPKRYDWTG----- 47 usage_00247.pdb 1 ---DVSFGSGVLTVKLGGDLGTYVINKGTPNKQIWLSSPSSGPKRYD-------- 44 usage_00248.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKCYD-------- 45 usage_00249.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKCYDWTG----- 48 usage_00317.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYD-------- 45 usage_01025.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYD-------- 45 usage_01546.pdb 1 --YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTG----- 48 usage_01547.pdb 1 D-YDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTG----- 49 usage_01548.pdb 1 ---------GVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTGKNWVY 46 usage_01549.pdb 1 EDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYD-------- 47 GVLTVKLGGDLGTYVInK TPNKqI LSSPSSGPK YD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################