################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:22:12 2021 # Report_file: c_0312_5.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00009.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00038.pdb # 6: usage_00111.pdb # # Length: 110 # Identity: 13/110 ( 11.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 49/110 ( 44.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/110 ( 6.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00009.pdb 1 F-AYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVM 59 usage_00015.pdb 1 -NIGWMLRQRATVSPRLQAYVEP---STDVRMTYAQMNALANRCADVLTALGIAKGDRVA 56 usage_00016.pdb 1 -NIGWMLRQRATVSPRLQAYVEP---STDVRMTYAQMNALANRCADVLTALGIAKGDRVA 56 usage_00017.pdb 1 -NIGWMLRQRATVSPRLQAYVEP---STDVRMTYAQMNALANRCADVLTALGIAKGDRVA 56 usage_00038.pdb 1 --LADVYRRNAALFPDRTAFMV-----DGVRLTHRDYLARAERLASGLLRDGVHTGDRVA 53 usage_00111.pdb 1 -NIGWMLRQRATVSPRLQAYVEP---STDVRMTYAQMNALANRCADVLTALGIAKGDRVA 56 r A sP A vr T a a r A l Gi kGDrVa usage_00009.pdb 60 LTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCI 109 usage_00015.pdb 57 LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG 106 usage_00016.pdb 57 LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG 106 usage_00017.pdb 57 LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG 106 usage_00038.pdb 54 ILSQNCSEMIELIGAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAG 103 usage_00111.pdb 57 LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG 106 ll n ef l g aklGA avP n rL a e f l d g kvv g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################