################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:02:55 2021 # Report_file: c_0510_12.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00014.pdb # 2: usage_00066.pdb # 3: usage_00067.pdb # 4: usage_00068.pdb # 5: usage_00082.pdb # 6: usage_00083.pdb # 7: usage_00084.pdb # 8: usage_00085.pdb # 9: usage_00086.pdb # 10: usage_00144.pdb # 11: usage_00188.pdb # 12: usage_00189.pdb # 13: usage_00190.pdb # 14: usage_00191.pdb # 15: usage_00192.pdb # 16: usage_00272.pdb # 17: usage_00307.pdb # 18: usage_00317.pdb # # Length: 145 # Identity: 7/145 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/145 ( 12.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/145 ( 48.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 -EPAARLAKLLVDITPA-GLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRG 58 usage_00066.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00067.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00068.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00082.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00083.pdb 1 HAPAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 58 usage_00084.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00085.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00086.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00144.pdb 1 -EPAARLAKLLVDITPA-GLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRG 58 usage_00188.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00189.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00190.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00191.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00192.pdb 1 -APAIELCRKLVAMTPQ-PLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRN 57 usage_00272.pdb 1 -EGYVKVAEHLNRLTPGDHEKRTALFNSGAEAVENAVKIARAYTR------RQAVVVFDH 53 usage_00307.pdb 1 -IPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKN-TG------RKYIIAFLG 52 usage_00317.pdb 1 -PAVVELSSLLAEVTPA-GFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWN 58 l L tP vf SG ve k usage_00014.pdb 59 GYHGDTFLAMSICD-P---------HGG------TD-VLAAQVFAPQVP-R-------D- 92 usage_00066.pdb 58 GYHGDTFGAMSVCD-P---------DN-----------LPENLFAPAPQSRM-----GE- 90 usage_00067.pdb 58 GYHGDTFGAMSVCD-P---------DN-----------LPENLFAPAPQSRM------E- 89 usage_00068.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00082.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00083.pdb 59 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 101 usage_00084.pdb 58 GYHGNTFGAMSVCD-P------------------------ENLFAPAPQSRM-----GE- 86 usage_00085.pdb 58 GYHGNTFGAMSVCD-P-------------------------NLFAPAPQSRM----DGE- 86 usage_00086.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00144.pdb 59 GYHGDTFLAMSICD-P---------HG-GMHSLWTD-VLAAQVFAPQVP-R-------D- 97 usage_00188.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00189.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00190.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----G-E- 99 usage_00191.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----DGE- 100 usage_00192.pdb 58 GYHGDTFGAMSVCD-P---------DN-SMHSLWKG-YLPENLFAPAPQSRM----G-E- 99 usage_00272.pdb 54 AYHGRTNLTMAMTA-KN--------QP--YKHGFGPF-ANEVYRVPTSYP-F-----RDG 95 usage_00307.pdb 53 GFHGRTFGSISLTA-SK--------AV--QRSIVGPF-MPGVIHVPYPNP-Y-----RN- 93 usage_00317.pdb 59 GYHGSTIGGASLGGMK-YMHEQDLP-------------IPGMAHIEQPWW-YKHGKDMT- 102 gyHG T s p usage_00014.pdb 93 -Y---DPAYSAAFEAQLAQH----- 108 usage_00066.pdb 91 -W---DERDMVGFARLMAAH----- 106 usage_00067.pdb 90 -W---DERDMVGFARLMAAH----- 105 usage_00068.pdb 101 -W---DERDMVGFARLMAAHR---- 117 usage_00082.pdb 101 -W---DERDMVGFARLMAAHR---- 117 usage_00083.pdb 102 -W---DERDMVGFARLMAAH----- 117 usage_00084.pdb 87 -W---DERDMVGFARLMAAH----- 102 usage_00085.pdb 87 -W---DERDMVGFARLMAAH----- 102 usage_00086.pdb 101 -W---DERDMVGFARLMAAHR---- 117 usage_00144.pdb 98 -Y---DPAYSAAFEAQLAQH----- 113 usage_00188.pdb 101 -W---DERDMVGFARLMA------- 114 usage_00189.pdb 101 -W---DERDMV-------------- 107 usage_00190.pdb 100 -W---DERDMV-------------- 106 usage_00191.pdb 101 -W---DERDMVGFARLMA------- 114 usage_00192.pdb 100 -W---DERDMV-------------- 106 usage_00272.pdb 96 ETD--GAAAAAHALDLINKQVG--- 115 usage_00307.pdb 94 ----------------------PWH 96 usage_00317.pdb 103 -PDEFGVVAARWLEEKILEI----- 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################