################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:13 2021 # Report_file: c_1409_226.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00011.pdb # 2: usage_00504.pdb # 3: usage_00686.pdb # 4: usage_01055.pdb # 5: usage_01257.pdb # 6: usage_01258.pdb # 7: usage_01485.pdb # 8: usage_01488.pdb # 9: usage_01861.pdb # # Length: 75 # Identity: 4/ 75 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 75 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 40/ 75 ( 53.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00011.pdb 1 DEAQQ-----MVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFKEFMLEWIVAQFERQL 55 usage_00504.pdb 1 -----SFKEFMLEWIVAQFERQLLDLG------------LDKP-------WYWDQFMQDL 36 usage_00686.pdb 1 -----SFKEFMLEWIVAQFERQLLDLG------------LDKP-------WYWDQFMQDL 36 usage_01055.pdb 1 -----SFKEFMYEWIIGQFERSLIDLG------------LDKP-------WYWDLFLKDI 36 usage_01257.pdb 1 -----SFKEFMLEWIVAQFERQLLDLG------------LDKP-------WYWDQFMQDL 36 usage_01258.pdb 1 -----SFKEFMLEWIVAQFERQLLDLG------------LDKP-------WYWDQFMQDL 36 usage_01485.pdb 1 -----SFKEFMYEWIIGQFERSLIDLG------------LDKP-------WYWDLFLKDI 36 usage_01488.pdb 1 -----SFKEFMYEWIIGQFERSLIDLG------------LDKP-------WYWDLFLKDI 36 usage_01861.pdb 1 -----SFKEFMYEWIIGQFERSLIDLG------------LDKP-------WYWDLFLKDI 36 M ewi qfer l dLg ldkp Wywd F d usage_00011.pdb 56 LDLG----------- 59 usage_00504.pdb 37 DETHHGMHLGVWYWR 51 usage_00686.pdb 37 DETHHGMHLGVWYW- 50 usage_01055.pdb 37 DELHHSYHMGVWYWR 51 usage_01257.pdb 37 DETHHGMHLGVWYW- 50 usage_01258.pdb 37 DETHHGMHLGVWYW- 50 usage_01485.pdb 37 DELHHSYHMGVWYWR 51 usage_01488.pdb 37 DELHHSYHMGVWYWR 51 usage_01861.pdb 37 DELHHSYHMGVWYWR 51 de h #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################