################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:20:50 2021 # Report_file: c_1490_29.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00054.pdb # 2: usage_00055.pdb # 3: usage_00056.pdb # 4: usage_00057.pdb # 5: usage_00093.pdb # 6: usage_00094.pdb # 7: usage_00149.pdb # 8: usage_00190.pdb # 9: usage_00197.pdb # 10: usage_00411.pdb # 11: usage_00412.pdb # 12: usage_00413.pdb # 13: usage_00851.pdb # 14: usage_00936.pdb # 15: usage_00937.pdb # 16: usage_01333.pdb # 17: usage_01334.pdb # 18: usage_01343.pdb # 19: usage_01401.pdb # 20: usage_01542.pdb # 21: usage_01608.pdb # # Length: 46 # Identity: 16/ 46 ( 34.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/ 46 ( 78.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 46 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKTY 43 usage_00055.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKTY 43 usage_00056.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKTY 43 usage_00057.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKTY 43 usage_00093.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEK-- 41 usage_00094.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEK-- 41 usage_00149.pdb 1 LFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFLKK-- 44 usage_00190.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEK-- 41 usage_00197.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEK-- 41 usage_00411.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLE--- 40 usage_00412.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_00413.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_00851.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_00936.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEK-- 41 usage_00937.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKV- 42 usage_01333.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_01334.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_01343.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_01401.pdb 1 LLGSYDP---QKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKV- 42 usage_01542.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 usage_01608.pdb 1 LLGSYDP---QKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK-- 41 LlGsydp qkQlIIEDPyYGnd DFE vyqQc rcc aFLe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################