################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:36:30 2021 # Report_file: c_0456_9.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00064.pdb # 2: usage_00070.pdb # 3: usage_00071.pdb # 4: usage_00072.pdb # 5: usage_00191.pdb # 6: usage_00192.pdb # 7: usage_00206.pdb # # Length: 94 # Identity: 17/ 94 ( 18.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 31/ 94 ( 33.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 94 ( 17.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00064.pdb 1 GITFIKFYAPWCGHCKTLAPTWEELSK-------GVKIAEVDCTAERNICSKYSVRGYPT 53 usage_00070.pdb 1 GITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-AGVKIAEVDCTAERNICSKYSVRGYPT 59 usage_00071.pdb 1 GITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-AGVKIAEVDCTAERNICSKYSVRGYPT 59 usage_00072.pdb 1 GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 60 usage_00191.pdb 1 ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDDRMLCRMKGVNSYPS 57 usage_00192.pdb 1 ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDDRMLCRMKGVNSYPS 57 usage_00206.pdb 1 ---LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 57 f FY P C HC LAPtw e k i V c r c V YP usage_00064.pdb 54 LLLFRGGK--KVSEHSGGRDLDSLHRFVLSQA-- 83 usage_00070.pdb 60 LLLFRGGK--KVSEHSGGRDLDSLHRFVLSQA-- 89 usage_00071.pdb 60 LLLFRGGK--KVSEHSGGRDLDSLHRFVLSQA-- 89 usage_00072.pdb 61 LLLFRGGK--KVSEHSGGRDLDSLHRFVLSQA-- 90 usage_00191.pdb 58 LFIFRSGM--AAVKYNGDRSKESLVAFAMQHVRS 89 usage_00192.pdb 58 LFIFRSGM--AAVKYNGDRSKESLVAFAMQHVRS 89 usage_00206.pdb 58 IKFFRNGDTASPKEYTAGREADDIVNWLKKR--- 88 l FR G g R sl f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################