################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:43 2021 # Report_file: c_1153_303.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00062.pdb # 2: usage_02139.pdb # 3: usage_02140.pdb # 4: usage_02433.pdb # 5: usage_02525.pdb # # Length: 70 # Identity: 0/ 70 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 70 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/ 70 ( 91.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00062.pdb 1 --RLDVVTPD--------------------GERAFNGILHR-HD-----S-IVILE---- 27 usage_02139.pdb 1 --RFLLHSDS--------------------GKIEFNAALTKHDNSGVDKGIRYAFS---- 34 usage_02140.pdb 1 KIRFLLHSDS--------------------GKIEFNAALTKHDNSGVDKGIRYAFS---- 36 usage_02433.pdb 1 ----GSCTGKFGYIL---CVLDYDNIDIQ--------------------F-NVKYR---- 28 usage_02525.pdb 1 ---------------PFLQVTNTTV-KE-LDS-----------------V-TLTCLSNDI 25 usage_00062.pdb 28 -----LEP-- 30 usage_02139.pdb 35 -----LPE-- 37 usage_02140.pdb 37 -----LPE-- 39 usage_02433.pdb 29 -AVVFKP--- 34 usage_02525.pdb 26 GANIQ--WLF 33 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################