################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:56 2021 # Report_file: c_1462_21.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00089.pdb # 2: usage_00172.pdb # 3: usage_01262.pdb # 4: usage_01794.pdb # 5: usage_01795.pdb # 6: usage_01796.pdb # 7: usage_02270.pdb # 8: usage_02477.pdb # 9: usage_02478.pdb # 10: usage_02479.pdb # # Length: 39 # Identity: 0/ 39 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 39 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/ 39 ( 71.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00089.pdb 1 AVGW-GETYGL-V----------APRATMEIIDDL-L-- 24 usage_00172.pdb 1 -GGG-KGGV--ICNP-----KEMSDREKERLARGYVRA- 29 usage_01262.pdb 1 ----G-W-----NSW-DCYGASVTEDEVKGNAEYMAKYL 28 usage_01794.pdb 1 --GW-GECVTMAGPL-Y---SSEYNDGAEHVL------- 25 usage_01795.pdb 1 --GW-GECVTIAGPL-Y---SSEYNDGAEHVL------- 25 usage_01796.pdb 1 --GW-GECVTIAGPL-Y---SSEYNDGAEHVL------- 25 usage_02270.pdb 1 -----AE-----MSSTG---SLATGDYTRAAVRMAEEH- 25 usage_02477.pdb 1 GEGW-GECVTMAGPL-Y---SSEYNDGAEHVLRHY---- 30 usage_02478.pdb 1 GEGW-GECVTMAGPL-Y---SSEYNDGAEHVLRHY---- 30 usage_02479.pdb 1 --GW-GECVTIAGPL-Y---SSEYNDGAEHVLRHY---- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################