################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:27:04 2021 # Report_file: c_1309_30.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00013.pdb # 2: usage_00039.pdb # 3: usage_00041.pdb # 4: usage_00042.pdb # 5: usage_00219.pdb # 6: usage_00261.pdb # 7: usage_00289.pdb # 8: usage_00612.pdb # 9: usage_01127.pdb # 10: usage_01157.pdb # # Length: 52 # Identity: 46/ 52 ( 88.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 52 ( 88.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 52 ( 11.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 --SSTLSHLRRTNTPI---AKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 47 usage_00039.pdb 1 TYSSTLSHLRRTNTPI---AKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 49 usage_00041.pdb 1 TYSSTLSHLRRTNTPI---AKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 49 usage_00042.pdb 1 TYSSTLSHLRRTNTPI---AKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 49 usage_00219.pdb 1 TYSSTLSHLRRTNTPI-KLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 51 usage_00261.pdb 1 TYSSTLSHLRRTNTPI-KLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 51 usage_00289.pdb 1 --SSTLSHLRRTNTPI---AKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 47 usage_00612.pdb 1 TYSSTLSHLRRTNTPI----KPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 48 usage_01127.pdb 1 --SSTLSHLRRTNTPIGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 50 usage_01157.pdb 1 TYSSTLSHLRRTNTPI--LAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 50 SSTLSHLRRTNTPI KPRQLHNTHWGLVCPAETPEGQACGLVKNLSL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################