################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:08 2021 # Report_file: c_0867_43.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00094.pdb # 2: usage_00095.pdb # 3: usage_00096.pdb # 4: usage_00134.pdb # 5: usage_00135.pdb # 6: usage_00196.pdb # 7: usage_00197.pdb # 8: usage_00375.pdb # # Length: 59 # Identity: 13/ 59 ( 22.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 59 ( 37.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/ 59 ( 13.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00094.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSPHCKLLVVSNPVDILTYVAWKISGFPKNRVIGSG- 58 usage_00095.pdb 1 ------NKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS-- 51 usage_00096.pdb 1 ----LVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS-- 53 usage_00134.pdb 1 TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS-- 57 usage_00135.pdb 1 TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGT 59 usage_00196.pdb 1 TRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGS-- 57 usage_00197.pdb 1 -RLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGT 58 usage_00375.pdb 1 SRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSG- 58 n I I v l NPVDIlTy wK sG P rv GS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################