################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:27:59 2021 # Report_file: c_0086_8.html ################################################################################################ #==================================== # Aligned_structures: 27 # 1: usage_00027.pdb # 2: usage_00032.pdb # 3: usage_00055.pdb # 4: usage_00069.pdb # 5: usage_00070.pdb # 6: usage_00077.pdb # 7: usage_00084.pdb # 8: usage_00085.pdb # 9: usage_00088.pdb # 10: usage_00089.pdb # 11: usage_00092.pdb # 12: usage_00094.pdb # 13: usage_00101.pdb # 14: usage_00102.pdb # 15: usage_00103.pdb # 16: usage_00104.pdb # 17: usage_00105.pdb # 18: usage_00117.pdb # 19: usage_00118.pdb # 20: usage_00119.pdb # 21: usage_00123.pdb # 22: usage_00124.pdb # 23: usage_00138.pdb # 24: usage_00152.pdb # 25: usage_00160.pdb # 26: usage_00165.pdb # 27: usage_00166.pdb # # Length: 128 # Identity: 22/128 ( 17.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/128 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/128 ( 15.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00027.pdb 1 -VQLQESGGGLVQPGGSLKLSCAASGFTFR-DYYMYWVRQTPEKRLEWVAFISNG---GG 55 usage_00032.pdb 1 -VQLQESGGGLVNLGGSMTLSCVASGFTFN-TYYMSWVRQTPEKTLELVAAINSD---GE 55 usage_00055.pdb 1 -VQLEESGGGLVTPGGSLRLSCAASGYVFS-TYDMSWVRQTPEKRLEWVAFISSG---GG 55 usage_00069.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFS-TYDMSWIRQTPEKRLEWVATISSG---GS 55 usage_00070.pdb 1 --KLVESGGGLVKPGGSLKLSCAASGFAFS-TYDMSWIRQTPEKRLEWVATISSG---G- 53 usage_00077.pdb 1 -VNLEESGGGLVQPGGSMKLSCVASGFTFS-NYWMNWVRQSPEKGLEWVADIRLKSNNY- 57 usage_00084.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFS-TYALSWVRQTADKRLEWVASIVSG---G- 54 usage_00085.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFTFS-TYALSWVRQTADKRLEWVASIVSG---G- 54 usage_00088.pdb 1 -VQLQQSGPELVKPGASVRMSCKSSGYI-FTDFYMNWVRQSHGKSLDYIGYISPY-S-G- 55 usage_00089.pdb 1 -VKLQESGGGLVQPGGSLKLSCATSGFTFS-DYYMYWVRQTPEKRLEWVAYISNG---GG 55 usage_00092.pdb 1 -VMLVESGGVLVKPGGSLKLSCAASGFTFS-RYAMSWVRQTPEKRLEWVATISSG---GS 55 usage_00094.pdb 1 --MLVESGGGLVKPGGSLKLSCAASGFTFS-SYAMSWVRQTPERRLEWVATITTR---G- 53 usage_00101.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFSFR-NYGMSWVRQTPEKRLEWVASISYG---G- 54 usage_00102.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFSFR-NYGMSWVRQTPEKRLEWVASISYG---G- 54 usage_00103.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFSFR-NYGMSWVRQTPEKRLEWVASISYG---G- 54 usage_00104.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFSFR-NYGMSWVRQTPEKRLEWVASISYG---G- 54 usage_00105.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFSFR-NYGMSWVRQTPEKRLEWVASISYG---G- 54 usage_00117.pdb 1 -VKLVESGGGLVKPGGSLKLSCSASGFTFS-SYAMSWVRQTPEKRLEWVASISTG---G- 54 usage_00118.pdb 1 QVQLQQSGGGSVKPGGSLKLSCSASGFSLS-TYAMSWVRQTPEKRLEWVASMSSG---G- 55 usage_00119.pdb 1 -VQLQQSGGGSVKPGGSLKLSCSASGFSLS-TYAMSWVRQTPEKRLEWVASMSSG---G- 54 usage_00123.pdb 1 -VKLVESGGGLVKPGGSLRLSCAASGFTFR-NYGMSWVRQTPEKRLEWVAAISGN---SL 55 usage_00124.pdb 1 --KLVESGGGLVKPGGSLRLSCAASGFTFR-NYGMSWVRQTPEKRLEWVAAISGN---SL 54 usage_00138.pdb 1 -VKLVESGGGLVKPGGSLKLSCAASGFAFS-SYDMSWFCQTPEKRLEWVASISSG---GS 55 usage_00152.pdb 1 -VKLVESGGGLVKLGGSLKLSCAASGFTFS-NYFMSWVRQTPEKRLELVAVITSN---GD 55 usage_00160.pdb 1 -VQLVESGGGLVTPGGSLKLSCAASGFAFN-YYDMFWVRQNTEKRLEWVAYINSG---GG 55 usage_00165.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFAFS-SYDMSWVRQTPEKRLEWVAYISSG---GG 55 usage_00166.pdb 1 -VQLVESGGGLVKPGGSLKLSCAASGFAFS-SYDMSWVRQTPEKRLEWVAYISSG---GG 55 L SGg V GgS lSC SG y W rQ k Le va usage_00027.pdb 56 STYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARGRG-Y----VWFAYWGQG 110 usage_00032.pdb 56 PIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNY-A----VYGMDYWGQ 110 usage_00055.pdb 56 RTSYPDTVKGRFTISRDDAKNTLYLQMSSLQSEDTAMYYCTRHFY-------AVLDYWGR 108 usage_00069.pdb 56 YTYYPDSVKGRFTISKDNARNTLYLQMSSLRSGDTALYYCTRFRY-D----GWYFDVWGQ 110 usage_00070.pdb 54 YTYYPDSVKGRFTISKDNARNTLYLQMSSLRSGDTALYYCTRFRY-D----GWYFDVWGQ 108 usage_00077.pdb 58 ATLYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGAY-Y--RYDYAMDYWGQ 114 usage_00084.pdb 55 NTYYSGSVKGRFTISRDIARNILYLQMSSLRSEDTAMYYCAREYY-G----YVGLAYWGQ 109 usage_00085.pdb 55 NTYYSGSVKGRFTISRDIARNILYLQMSSLRSEDTAMYYCAREYY-G----YVGLAYWGQ 109 usage_00088.pdb 56 VTGYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCAGSSG-N----KWAMDYWGH 110 usage_00089.pdb 56 STYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGG-Y----YAMDYWGQG 110 usage_00092.pdb 56 YSYYPDSVKGRFTISRDNVKNTLYLQMSSLRSEDTAMYYCARDSG--------GFAYWGQ 107 usage_00094.pdb 54 YTFYPDSVKGRFTVSRDNARNTLNLQMSSLRSEDTAMFYCTREGL-L--LDYFTMDYWGQ 110 usage_00101.pdb 55 LIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS-F----LVWFTFWGQ 109 usage_00102.pdb 55 LIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS-F----LVWFTFWGQ 109 usage_00103.pdb 55 LIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS-F----LVWFTFWGQ 109 usage_00104.pdb 55 LIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS-F----LVWFTFWGQ 109 usage_00105.pdb 55 LIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDS-F----LVWFTFWGQ 109 usage_00117.pdb 55 DTHYQDSVKGRFTTSRDNARNILTLQMSSLRSEDTAMYYCARNRG-------WYFDVWGA 107 usage_00118.pdb 56 SLYYPDTVKGRFTISRDTVKNIVYLQMSSLRSEDTAMYYCVRGGY--------GTSYWGQ 107 usage_00119.pdb 55 SLYYPDTVKGRFTISRDTVKNIVYLQMSSLRSEDTAMYYCVRGGY--------GTSYWGQ 106 usage_00123.pdb 56 YTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDDYYGKSP-YFFDVWGA 114 usage_00124.pdb 55 YTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDD-Y----PYFFDVWGA 109 usage_00138.pdb 56 YTYYPDSVKGRFTISRDNARNTLYLQMNSLRSEDTALYYCARDYD-------YGVDYWGQ 108 usage_00152.pdb 56 NTYYPDTVKGRFTISRDNAQNTLYLQMSSLKSEDTALYYCARRDS-S----ASLYFDYWG 110 usage_00160.pdb 56 NTYYPDTVKGRFTISRDNAKKTLFLQMSSLRSEDTAMYYCARQLY-G----NSFFDYWGQ 110 usage_00165.pdb 56 STYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARPD---------AMDYWGQ 106 usage_00166.pdb 56 STYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARPDY-R----SYAMDYWGQ 110 Y KGr T s D lqm L Dta y C r usage_00027.pdb 111 T--TVTVS 116 usage_00032.pdb 111 GT-TVTV- 116 usage_00055.pdb 109 GT-TLTVS 115 usage_00069.pdb 111 GT-TVTV- 116 usage_00070.pdb 109 GT-TVTV- 114 usage_00077.pdb 115 GT-SVTV- 120 usage_00084.pdb 110 GT-LVTVS 116 usage_00085.pdb 110 GT-LVTVS 116 usage_00088.pdb 111 GA-SVTV- 116 usage_00089.pdb 111 T--TVTV- 115 usage_00092.pdb 108 GT-LVTVS 114 usage_00094.pdb 111 GT-SVTVS 117 usage_00101.pdb 110 GT-LVTVS 116 usage_00102.pdb 110 GT-LVTVS 116 usage_00103.pdb 110 GT-LVTVS 116 usage_00104.pdb 110 GT-LVTVS 116 usage_00105.pdb 110 GT-LVTVS 116 usage_00117.pdb 108 GT-TVTVS 114 usage_00118.pdb 108 GT-TVTV- 113 usage_00119.pdb 107 GT-TVTV- 112 usage_00123.pdb 115 GT-TVTAS 121 usage_00124.pdb 110 GT-TVTA- 115 usage_00138.pdb 109 GT-SVTVS 115 usage_00152.pdb 111 QGTTLTV- 117 usage_00160.pdb 111 GT-SLTVS 117 usage_00165.pdb 107 GT-SVTVS 113 usage_00166.pdb 111 GT-SVTVS 117 T #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################