################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:26 2021 # Report_file: c_0004_30.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00087.pdb # 2: usage_00174.pdb # 3: usage_00175.pdb # 4: usage_00432.pdb # # Length: 253 # Identity: 167/253 ( 66.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 167/253 ( 66.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/253 ( 8.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 -------------RLSPSGVAVDSAGNVYVTSEGMYGRVVKLA----GTTVLPFNGLYQP 43 usage_00174.pdb 1 NTQTV-LPF-TGL-NTPNGVAVDSAGTVYVTDHG-NNRVVKLAAGSNTQTVLPFTGLNTP 56 usage_00175.pdb 1 -TQTV-LPF-TGL-NTPNGVAVDSAGTVYVTDHG-NNRVVKLAAGSNTQTVLPFTGLNTP 55 usage_00432.pdb 1 -GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA----GTTVLPFNGLYQP 55 P GVAVDSAG VYVT G RVVKLA TVLPF GL P usage_00087.pdb 44 QGLAVDGAGTV-YVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGN 102 usage_00174.pdb 57 NGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGN 116 usage_00175.pdb 56 NGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGN 115 usage_00432.pdb 56 QGLAVDGAGTV-YVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGN 114 G AVD AGTV NNRVV LAAGSN QTVLPF GLN P G AVD G VYV D GN usage_00087.pdb 103 NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF 162 usage_00174.pdb 117 NRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPF 176 usage_00175.pdb 116 NRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPF 175 usage_00432.pdb 115 NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF 174 NRVVKLAAGS TQTVLPFTGLN P GVAVD G VYVTD NNRVVKL A SN Q VLPF usage_00087.pdb 163 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY 222 usage_00174.pdb 177 TGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVY 236 usage_00175.pdb 176 TGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVY 235 usage_00432.pdb 175 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY 234 T P G AVD AGTVYVT H N VVKL AGS T TVLPFTGLNTP VAVDS TVY usage_00087.pdb 223 VADRGNDRVVKLT 235 usage_00174.pdb 237 VTDHGNNRVVKLA 249 usage_00175.pdb 236 VTDHGNNRVVKLA 248 usage_00432.pdb 235 VADRGNDRVVKL- 246 V D GN RVVKL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################