################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:15:07 2021 # Report_file: c_1164_64.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00204.pdb # 2: usage_00205.pdb # 3: usage_00206.pdb # 4: usage_00207.pdb # 5: usage_00487.pdb # 6: usage_00488.pdb # 7: usage_00489.pdb # 8: usage_00605.pdb # 9: usage_00606.pdb # 10: usage_00925.pdb # 11: usage_00926.pdb # 12: usage_01173.pdb # 13: usage_01584.pdb # 14: usage_01716.pdb # 15: usage_01889.pdb # # Length: 65 # Identity: 28/ 65 ( 43.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 65 ( 44.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 65 ( 27.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00204.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00205.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00206.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00207.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00487.pdb 1 EQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGT 60 usage_00488.pdb 1 EQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGT 60 usage_00489.pdb 1 EQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGT 60 usage_00605.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00606.pdb 1 EKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGM 60 usage_00925.pdb 1 --GTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPQLKGKLNGI 58 usage_00926.pdb 1 --GTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPQLKGKLNGI 58 usage_01173.pdb 1 IKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGI 60 usage_01584.pdb 1 VRGMMTTVHSYTNDQRILDASHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGM 60 usage_01716.pdb 1 IKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGI 60 usage_01889.pdb 1 IKGTMTTTHSY----------------ARAAAVNIVPTTTGAAKAVALVIPELKGKLNGI 44 MTT H Y ARAA I PT TGAAKA LVlP LKG G usage_00204.pdb 61 ALRVP 65 usage_00205.pdb 61 ALRVP 65 usage_00206.pdb 61 ALRVP 65 usage_00207.pdb 61 ALRVP 65 usage_00487.pdb 61 SMRVP 65 usage_00488.pdb 61 SMRVP 65 usage_00489.pdb 61 SMRVP 65 usage_00605.pdb 61 ALRVP 65 usage_00606.pdb 61 ALRVP 65 usage_00925.pdb 59 ALRVP 63 usage_00926.pdb 59 ALRVP 63 usage_01173.pdb 61 ALRVP 65 usage_01584.pdb 61 AMRVP 65 usage_01716.pdb 61 ALRVP 65 usage_01889.pdb 45 ALRVP 49 RVP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################