################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:22:34 2021 # Report_file: c_0803_7.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00010.pdb # 7: usage_00011.pdb # 8: usage_00012.pdb # 9: usage_00013.pdb # 10: usage_00016.pdb # 11: usage_00078.pdb # 12: usage_00079.pdb # 13: usage_00080.pdb # 14: usage_00081.pdb # 15: usage_00104.pdb # # Length: 77 # Identity: 19/ 77 ( 24.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 19/ 77 ( 24.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 77 ( 18.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 LPFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 58 usage_00002.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00003.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00004.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00005.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00010.pdb 1 -PFFEIFVDAPLNICESRDVK-GLYKRARAG-EIKGFTGIDSDYEKPETPERVLKTNLST 57 usage_00011.pdb 1 -PFFEIFVDAPLNICESRDVK-GLYKRARAG-EIKGFTGIDSDYEKPETPERVLKTNLST 57 usage_00012.pdb 1 -PFFEIFVDAPLNICESRDVK-GLYKRARAG-EIKGFTGIDSDYEKPETPERVLKTNLST 57 usage_00013.pdb 1 -PFFEIFVDAPLNICESRDVK-GLYKRARAG-EIKGFTGIDSDYEKPETPERVLKTNLST 57 usage_00016.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00078.pdb 1 -PFLEIYVKASLEEVIRRD--PKGLYKKALKGELENFTGITDPYEPPENPQLVLDTESNT 57 usage_00079.pdb 1 IPFLEIYVKASLEEVIRRD--PKGLYKKALKGE-------TDPYEPPENPQLVLDTESNT 51 usage_00080.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00081.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 usage_00104.pdb 1 -PFFEVFVDAPLHVCEQRDVK-GLYKKARAG-EIKGFTGIDSEYEKPEAPELVLKTDSCD 57 PF E V A L RD E YE PE P VL T usage_00001.pdb 59 VNDCVQQVVELLNERD- 74 usage_00002.pdb 58 VNDCVQQVVELLNERD- 73 usage_00003.pdb 58 VNDCVQQVVELLNERD- 73 usage_00004.pdb 58 VNDCVQQVVELLNERD- 73 usage_00005.pdb 58 VNDCVQQVVELLNERD- 73 usage_00010.pdb 58 VSDCVHQVVELLQEQN- 73 usage_00011.pdb 58 VSDCVHQVVELLQEQN- 73 usage_00012.pdb 58 VSDCVHQVVELLQEQN- 73 usage_00013.pdb 58 VSDCVHQVVELLQEQN- 73 usage_00016.pdb 58 VNDCVQQVVELLQERD- 73 usage_00078.pdb 58 IEHNVSYLYSLVKAVIE 74 usage_00079.pdb 52 IEHNVSYLYSLVKAVIE 68 usage_00080.pdb 58 VNDCVQQVVELLQERD- 73 usage_00081.pdb 58 VNDCVQQVVELLQERD- 73 usage_00104.pdb 58 VNDCVQQVVELLQER-- 72 V L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################