################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:03 2021 # Report_file: c_0636_15.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00084.pdb # 2: usage_00085.pdb # 3: usage_00086.pdb # 4: usage_00087.pdb # 5: usage_00088.pdb # 6: usage_00176.pdb # # Length: 126 # Identity: 27/126 ( 21.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 80/126 ( 63.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 39/126 ( 31.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00084.pdb 1 TPFESALIDSLADAYTDYRAEM-----D-------K--PKTDVLLPARTKFLGFITKFLK 46 usage_00085.pdb 1 TPFESALIDSLADAYTDYRAEM------K-----------TDVLLPARTKFLGFITKFLK 43 usage_00086.pdb 1 TPFESALIDSLADAYTDYRAEM------K---TYYK--PKTDVLLPARTKFLGFITKFLK 49 usage_00087.pdb 1 --------KTYYYTALG-----FMGDVD-------K--PKTDVLLPARTKFLGFITKFLK 38 usage_00088.pdb 1 TPFESALIDSLADAYTDYRAEM-----D-------K--PKTDVLLPARTKFLGFITKFLK 46 usage_00176.pdb 1 SELNEFYADMIFCGVQDIHYKF-----NNTNLF---KQNETTFLNEDLPKWSGYFEKLLK 52 d d TdvLlpartKflGfitKfLK usage_00084.pdb 47 KNS-----S-GFLVGDKISWVDLLVAEHVADMTNRVPEYIEGFPEVKAHMERIQQTPRIK 100 usage_00085.pdb 44 KNS-----S-GFLVGDKISWVDLLVAEHVADMTNRVPEYIEGFPEVKAHMERIQQTPRIK 97 usage_00086.pdb 50 KNS-----S-GFLVGDKISWVDLLVAEHVADMTNRVPEYIEGFPEVKAHMERIQQTPRIK 103 usage_00087.pdb 39 KNS-----S-GFLVGDKISWVDLLVAEHVADMTNRVPEYIEGFPEVKAHMERIQQTPRIK 92 usage_00088.pdb 47 KNS-----S-GFLVGDKISWVDLLVAEHVADMTNRVPEYIEGFPEVKAHMERIQQTPRIK 100 usage_00176.pdb 53 KNHTNNNNDKYYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIK 112 KNs s gflVGdkiswvDLlVaehvaDmtnrvPeyiegFPevKAHmErIqqtPrIK usage_00084.pdb 101 KWIET- 105 usage_00085.pdb 98 KWIET- 102 usage_00086.pdb 104 KWIE-- 107 usage_00087.pdb 93 KWIET- 97 usage_00088.pdb 101 KWIET- 105 usage_00176.pdb 113 NYITNR 118 kwIe #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################