################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:59 2021 # Report_file: c_1403_77.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00125.pdb # 2: usage_00959.pdb # 3: usage_00960.pdb # 4: usage_00961.pdb # 5: usage_00962.pdb # 6: usage_00963.pdb # 7: usage_00965.pdb # 8: usage_00966.pdb # 9: usage_00967.pdb # 10: usage_01310.pdb # # Length: 66 # Identity: 44/ 66 ( 66.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 66 ( 66.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 66 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 ---LKLFLAQYREV-A--------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 48 usage_00959.pdb 1 --SLKLFLAQYREVAAFAS----DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 54 usage_00960.pdb 1 --SLKLFLAQYREVAAFA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 55 usage_00961.pdb 1 ----------YREVAAFA-Q---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 46 usage_00962.pdb 1 AGSLKLFLAQYREVAAS-------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 53 usage_00963.pdb 1 --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 57 usage_00965.pdb 1 --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 57 usage_00966.pdb 1 --SLKLFLAQYREVAAFA-QFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 57 usage_00967.pdb 1 ---LKLFLAQYREVAAFA-Q--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 54 usage_01310.pdb 1 --SLKLFLAQYREVAAFA------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI 52 YREV A LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLI usage_00125.pdb 49 YAGV-- 52 usage_00959.pdb 55 YAG--- 57 usage_00960.pdb 56 YAG--- 58 usage_00961.pdb 47 YAGVNG 52 usage_00962.pdb 54 YAGVNG 59 usage_00963.pdb 58 YAG--- 60 usage_00965.pdb 58 YAGVNG 63 usage_00966.pdb 58 YAGVNG 63 usage_00967.pdb 55 YAGVNG 60 usage_01310.pdb 53 YAGVNG 58 YAG #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################