################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:35 2021 # Report_file: c_1363_21.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00195.pdb # 2: usage_00264.pdb # 3: usage_00787.pdb # 4: usage_01549.pdb # 5: usage_01550.pdb # 6: usage_01551.pdb # 7: usage_01552.pdb # 8: usage_01553.pdb # 9: usage_01554.pdb # 10: usage_01555.pdb # 11: usage_01737.pdb # 12: usage_01738.pdb # # Length: 56 # Identity: 7/ 56 ( 12.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 14/ 56 ( 25.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 56 ( 17.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00195.pdb 1 SKEEIRKRVEEVAKILDI-HH-VLNHFPRELSGGQQQRVALARALVKDPSLLLLDE 54 usage_00264.pdb 1 ----IDAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 50 usage_00787.pdb 1 ------KEIEEHCSLGLD-PEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLD- 48 usage_01549.pdb 1 --SVIDAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 52 usage_01550.pdb 1 -----DAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 49 usage_01551.pdb 1 -----DAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 49 usage_01552.pdb 1 --SVIDAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 52 usage_01553.pdb 1 -----DAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 49 usage_01554.pdb 1 -----DAAVKTAADILGL-QP-LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQ 49 usage_01555.pdb 1 -KDEVKRRVTELLSLVGLGDK-HDSYPSN-LSGGQKQRVAIARALASNPKVLLCD- 52 usage_01737.pdb 1 KKEVINQRVNQVAEVLQL-AH-LLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE 54 usage_01738.pdb 1 KKEVINQRVNQVAEVLQL-AH-LLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLD- 53 v LSGGQ qrva r P l D #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################