################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:22 2021 # Report_file: c_0777_81.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00010.pdb # 2: usage_00162.pdb # 3: usage_00250.pdb # 4: usage_00430.pdb # 5: usage_00839.pdb # 6: usage_00873.pdb # 7: usage_00957.pdb # 8: usage_01000.pdb # 9: usage_01087.pdb # 10: usage_01258.pdb # 11: usage_01391.pdb # 12: usage_01508.pdb # # Length: 75 # Identity: 0/ 75 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 5/ 75 ( 6.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 75 ( 41.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 --MKIGIVGL-----GRVGSSTAFALLMKGFA-REMVLIDVDKKRAEGDALDLIHGT-P- 50 usage_00162.pdb 1 --NKITVVGV-----GAVGMACAISILMKDLA-DELALVDVMEDKLKGEMMDLQHGS-L- 50 usage_00250.pdb 1 ---RVVLIGGNRQ-YGGAI-ISTEACINSG-A-GLTTVIT-----DVKNHGPLHARCPE- 47 usage_00430.pdb 1 --NKITVVGV-----GQVGMACAISILGKSLA-DELALVDVLEDKLKGEMMDLQHGS-L- 50 usage_00839.pdb 1 --ARVVVIGA-----GFVGASYVFALMNQGIA-DEIVLIDANESKAIGDAMDFNHGK-V- 50 usage_00873.pdb 1 --TKLAVIGA-----GAVGSTLAFAAAQRGIA-REIVLEDIAKERVEAEVLDMQHGS-S- 50 usage_00957.pdb 1 --NKITVVGV-----GAVGMACAISILMKDLA-DELALVDVIEDKLKGEMMDLQHGS-L- 50 usage_01000.pdb 1 --NKITVVGV-----GAVGMACAISILMKDLA-DELALVDVIEDKLKGEMMDLQHGS-L- 50 usage_01087.pdb 1 --NKITVVGV-----GAVGMACAISILMKDLA-DELALVDVIEDKLKGEMMDLQHGS-L- 50 usage_01258.pdb 1 GKIGLFGGAG--VGKTVLIQELINNVAQEHGGLSVFAGVGE----RTREGNDLYHEM-KD 53 usage_01391.pdb 1 --NKITVVGV-----GAVGMACAISILMKELA-DEIALVDVMEDKLKGEMMDLQHGS-L- 50 usage_01508.pdb 1 --NKITVVGV-----GAVGMACAISILMKDLA-DELALVDVIEDKLKGEMMDLQHGS-L- 50 g g a d h usage_00010.pdb 51 FT--R--RANIYA-- 59 usage_00162.pdb 51 FL--R--TPKIVSG- 60 usage_00250.pdb 48 AVVG----------- 51 usage_00430.pdb 51 FL--Q--TPKIVAD- 60 usage_00839.pdb 51 FA--P--KPVDIWH- 60 usage_00873.pdb 51 FY--P--TVSIDGS- 60 usage_00957.pdb 51 FL--K--TPKIVSS- 60 usage_01000.pdb 51 FL--K--TPKIVSS- 60 usage_01087.pdb 51 FL--R--TPKIVSG- 60 usage_01258.pdb 54 SG---VISKTSMVFG 65 usage_01391.pdb 51 FL--R--TPKIVSG- 60 usage_01508.pdb 51 FL--R--TPKIVSG- 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################