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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:15:38 2021
# Report_file: c_0407_25.html
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#====================================
# Aligned_structures: 5
#   1: usage_00003.pdb
#   2: usage_00004.pdb
#   3: usage_00018.pdb
#   4: usage_00101.pdb
#   5: usage_00173.pdb
#
# Length:        108
# Identity:        2/108 (  1.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      6/108 (  5.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           48/108 ( 44.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00003.pdb         1  PLQVEP--PEPVVAVALGASRQLTCRLAC-A---DRGASVQWRGLD----TSLGAV----   46
usage_00004.pdb         1  PLQVEP--PEPVVAVALGASRQLTCRLAC-A---DRGASVQWRGLD----TSLGAV----   46
usage_00018.pdb         1  PPRFSI--PPTNHEIMPGGSVNITCVAVG-S---P-MPYVKWMLGA----ED--LTPED-   46
usage_00101.pdb         1  LKVTQPE---KSVSVAAGDSTVLNCTLTSLL---P-VGPIKWYRGVGQSRLL--IYSFTG   51
usage_00173.pdb         1  NIQVTN-HSQ--LFQN--MTCELHLTCSV--EDADDNVSFRWEALG----NT--LS----   43
                                              s  l c                W                  

usage_00003.pdb        47  ---------QS-----D-TGRSVLTVR-NASLSAAGTRVCVGS--C-G   75
usage_00004.pdb        47  ---------QS-----D-TGRSVLTVR-NASLSAAGTRVCVGS--C-G   75
usage_00018.pdb        47  --------------DMP-IGRNVLELN-DVRQ--SANYTCVAM--S-T   73
usage_00101.pdb        52  EHFPRVTNVSDATK--RNNMDFSIRIS-NVTPEDAGTYYCVKFQKGP-   95
usage_00173.pdb        44  ----------------S-QPNLTVSWDPRISS--EQDYTCIAE--N--   68
                                                                  Cv       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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