################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:50:59 2021 # Report_file: c_0478_14.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # 6: usage_00038.pdb # 7: usage_00069.pdb # 8: usage_00070.pdb # 9: usage_00071.pdb # 10: usage_00072.pdb # 11: usage_00114.pdb # 12: usage_00126.pdb # 13: usage_00127.pdb # 14: usage_00175.pdb # 15: usage_00177.pdb # 16: usage_00202.pdb # 17: usage_00257.pdb # # Length: 90 # Identity: 14/ 90 ( 15.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 90 ( 31.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 90 ( 22.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00017.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00018.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00026.pdb 1 LYVIVEYASKGNLREYLRARR-PPGDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 59 usage_00027.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00038.pdb 1 -----EYCCYGDLLNFLRRKRDS-----FICSKALDLEDLLSFSYQVAKGMAFLASKNCI 50 usage_00069.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00070.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00071.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00072.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00114.pdb 1 VQLITQLMPFGCLLDYVREHK-D----------NIGSQYLLNWCVQIAKGMNYLEDRRLV 49 usage_00126.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00127.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00175.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00177.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 usage_00202.pdb 1 LNLLTEYIEGGTLKDFLRSM--D----------PFPWQQKVRFAKGIASGMAYLHSMCII 48 usage_00257.pdb 1 LRLVMEYLPSGCLRDFLQRHR-A----------RLDASRLLLYSSQICKGMEYLGSRRCV 49 ey G L l l q GM yL s usage_00016.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLPL 79 usage_00017.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLP- 78 usage_00018.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLP- 78 usage_00026.pdb 60 HRDLAARNVLVTENNVMKIADFGLARDIN- 88 usage_00027.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLPL 79 usage_00038.pdb 51 HRDLAARNILLTHGRITKICDFGLARDIK- 79 usage_00069.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLL-- 77 usage_00070.pdb 50 HRDLAARNILVESEAHVKIADFGLAKL--- 76 usage_00071.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLL-- 77 usage_00072.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLL-- 77 usage_00114.pdb 50 HRDLAARNVLVKTPQHVKITDFGLAKLLGA 79 usage_00126.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLL-- 77 usage_00127.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLPL 79 usage_00175.pdb 50 HRALAARNILVESEAHVKIADFGLAKLLPL 79 usage_00177.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLPL 79 usage_00202.pdb 49 HRDLNSHNCLIKLDKTVVVADFGLSRLIV- 77 usage_00257.pdb 50 HRDLAARNILVESEAHVKIADFGLAKLLPL 79 HRdLaarN L ki DFGLa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################