################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:36 2021 # Report_file: c_0491_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00002.pdb # 2: usage_00057.pdb # 3: usage_00058.pdb # 4: usage_00059.pdb # 5: usage_00060.pdb # 6: usage_00061.pdb # 7: usage_00062.pdb # 8: usage_00063.pdb # 9: usage_00064.pdb # 10: usage_00065.pdb # 11: usage_00100.pdb # # Length: 79 # Identity: 32/ 79 ( 40.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 72/ 79 ( 91.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 79 ( 7.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --KVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEF 58 usage_00057.pdb 1 -EKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 59 usage_00058.pdb 1 --KVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 58 usage_00059.pdb 1 --KVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 58 usage_00060.pdb 1 --KVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 58 usage_00061.pdb 1 -EKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 59 usage_00062.pdb 1 --KVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 58 usage_00063.pdb 1 NEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 60 usage_00064.pdb 1 -EKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 59 usage_00065.pdb 1 -EKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDF 59 usage_00100.pdb 1 -ADIACRIATALVEAKLAACVQIGQAVESIYQWDNNICQSHEVPMQIKCMTTDYPAIEQL 59 kvAkeIArAvVEkrLAACVnlipqitSIYeWkgkIeedsEVlMmIKtqsslvPAlt f usage_00002.pdb 59 VRSVHPYEVAEVIALP--- 74 usage_00057.pdb 60 VRSVHPYEVAEVIALP--- 75 usage_00058.pdb 59 VRSVHPYEVAEVIALP--- 74 usage_00059.pdb 59 VRSVHPYEVAEVIALP--- 74 usage_00060.pdb 59 VRSVHPYEVAEVIALP--- 74 usage_00061.pdb 60 VRSVHPYEVAEVIALP--- 75 usage_00062.pdb 59 VRSVHPYEVAEVIALP--- 74 usage_00063.pdb 61 VRSVHPYEVAEVIALPVEQ 79 usage_00064.pdb 60 VRSVHPYEVAEVIALP--- 75 usage_00065.pdb 60 VRSVHPYEVAEVIAL---- 74 usage_00100.pdb 60 VITMHPYEVPEFIAT---- 74 VrsvHPYEVaEvIAl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################