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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:17:49 2021
# Report_file: c_1104_22.html
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#====================================
# Aligned_structures: 5
#   1: usage_00436.pdb
#   2: usage_00437.pdb
#   3: usage_00438.pdb
#   4: usage_00439.pdb
#   5: usage_00440.pdb
#
# Length:        122
# Identity:      106/122 ( 86.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    111/122 ( 91.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/122 (  9.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00436.pdb         1  ---MPQMVAIYNGMGGGAAATIAAVELLKGAFENTGLMALAILGGLIGSVAFTGSLIAFA   57
usage_00437.pdb         1  -----PQVAIYNG-GGGAAATIAAVELLKGAFENTGL-ALAILGGLIGSVAFTGSLIAFA   53
usage_00438.pdb         1  ---MPQMVAIYNGMGGGAAATIAAVELLKGAFENTGLMALAILGGLIGSVAFTGSLIAFA   57
usage_00439.pdb         1  ---MPQMVAIYNGMGGGAAATIAAVELLKGAFENTGLMALAILGGLIGSVAFTGSLIAFA   57
usage_00440.pdb         1  MTDMPQMVAIYNGMGGGAAATIAAVELLKGAFENTGLMALAILGGLIGSVAFTGSLIAFA   60
                                qmVAIYNG GGGAAATIAAVELLKGAFENTGL ALAILGGLIGSVAFTGSLIAFA

usage_00436.pdb        58  KLQGIMKSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLMTL-  116
usage_00437.pdb        54  KLQGI-KSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLTLPI  112
usage_00438.pdb        58  KLQGIMKSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLMTLP  117
usage_00439.pdb        58  KLQGIMKSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLMTL-  116
usage_00440.pdb        61  KLQGIMKSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLMTLP  120
                           KLQGI KSRPILFPGQKAVNALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLmtl 

usage_00436.pdb            --     
usage_00437.pdb            --     
usage_00438.pdb       118  IG  119
usage_00439.pdb            --     
usage_00440.pdb            --     
                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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