################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:12:39 2021 # Report_file: c_0141_13.html ################################################################################################ #==================================== # Aligned_structures: 19 # 1: usage_00014.pdb # 2: usage_00015.pdb # 3: usage_00016.pdb # 4: usage_00017.pdb # 5: usage_00018.pdb # 6: usage_00019.pdb # 7: usage_00020.pdb # 8: usage_00021.pdb # 9: usage_00022.pdb # 10: usage_00023.pdb # 11: usage_00024.pdb # 12: usage_00025.pdb # 13: usage_00026.pdb # 14: usage_00027.pdb # 15: usage_00028.pdb # 16: usage_00097.pdb # 17: usage_00270.pdb # 18: usage_00271.pdb # 19: usage_00343.pdb # # Length: 181 # Identity: 51/181 ( 28.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 51/181 ( 28.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/181 ( 11.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00015.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00016.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00017.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00018.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00019.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00020.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00021.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00022.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00023.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00024.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00025.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00026.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00027.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00028.pdb 1 --YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVD 57 usage_00097.pdb 1 --AAALVARNTGFLALYLSGAAYTA-SKGLPDLGIVTSTEVAERARDLVRATD-LPVLVD 56 usage_00270.pdb 1 DALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVD 60 usage_00271.pdb 1 DALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVD 60 usage_00343.pdb 1 --AAALVARNTGFLALYLSGAAYTA-SKGLPDLGIVTSTEVAERARDLVRATD-LPVLVD 56 A GF A SG A G PD G T V A L VD usage_00014.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00015.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00016.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00017.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00018.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00019.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00020.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00021.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00022.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00023.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00024.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00025.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00026.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00027.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00028.pdb 58 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR---P-GKECVPAGEMVDRIK 113 usage_00097.pdb 57 IDTGFGGVLNVARTAVE-VEAKVAAVQIEDQQLPKKCGHL---N-GKKLVTTEELVQKIK 111 usage_00270.pdb 61 GDTGGGGPLNVQRFIRELISAGAKGVFLED----QVWPKKCGHMRGKAVVPAEEHALKIA 116 usage_00271.pdb 61 GDTGGGGPLNVQRFIRELISAGAKGVFLED----QVWPKKCGHMRGKAVVPAEEHALKIA 116 usage_00343.pdb 57 IDTGFGGVLNVARTAVE-VEAKVAAVQIEDQQLPKKC------N-GKKLVTTEELVQKIK 108 DTG GG N R A V ED GK V E I usage_00014.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00015.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00016.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00017.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00018.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00019.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00020.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00021.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00022.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00023.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00024.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00025.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00026.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00027.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00028.pdb 114 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 173 usage_00097.pdb 112 AIKE--VAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSK 169 usage_00270.pdb 117 AAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSA- 175 usage_00271.pdb 117 AAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSA- 175 usage_00343.pdb 109 AIKE--VAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSK 166 A ARTDA G I RA Y AGAD F EA usage_00014.pdb - usage_00015.pdb - usage_00016.pdb - usage_00017.pdb - usage_00018.pdb - usage_00019.pdb - usage_00020.pdb - usage_00021.pdb - usage_00022.pdb - usage_00023.pdb - usage_00024.pdb - usage_00025.pdb - usage_00026.pdb - usage_00027.pdb - usage_00028.pdb - usage_00097.pdb - usage_00270.pdb - usage_00271.pdb - usage_00343.pdb 167 V 167 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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