################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:23 2021 # Report_file: c_0416_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00013.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00018.pdb # 9: usage_00019.pdb # 10: usage_00020.pdb # 11: usage_00022.pdb # # Length: 64 # Identity: 14/ 64 ( 21.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 32/ 64 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 64 ( 6.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 YDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVL 60 usage_00002.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00003.pdb 1 VDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 60 usage_00004.pdb 1 -DIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAK-QGLLINGGIIDEGYTGEIQVIC 58 usage_00013.pdb 1 YDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVL 60 usage_00016.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00017.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00018.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00019.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00020.pdb 1 -DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVIL 59 usage_00022.pdb 1 -DVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDSDYRGEVKVIL 59 D P Td I P g y r aprSglA idv aGvID dYrG v V l usage_00001.pdb 61 FNFG 64 usage_00002.pdb 60 FNHS 63 usage_00003.pdb 61 FNHS 64 usage_00004.pdb 59 TN-- 60 usage_00013.pdb 61 FNFG 64 usage_00016.pdb 60 FNHS 63 usage_00017.pdb 60 FNHS 63 usage_00018.pdb 60 FNHS 63 usage_00019.pdb 60 FNHS 63 usage_00020.pdb 60 FNHS 63 usage_00022.pdb 60 YNTT 63 N #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################