################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:03:49 2021 # Report_file: c_0544_4.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00011.pdb # 4: usage_00015.pdb # 5: usage_00049.pdb # 6: usage_00057.pdb # 7: usage_00058.pdb # 8: usage_00059.pdb # 9: usage_00060.pdb # # Length: 157 # Identity: 60/157 ( 38.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 76/157 ( 48.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/157 ( 24.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 AQAQRSLGNFKIG--WEKQPLAIVRALGIVKQAAARANA-LGRLDPAIGDAIVKAAQEVI 57 usage_00002.pdb 1 -QAQRSLGNFKIG--WEKQPLAIVRALGIVKQAAARANA-LGRLDPAIGDAIVKAAQEVI 56 usage_00011.pdb 1 AQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVV 60 usage_00015.pdb 1 AQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQ-DYGLDPKIANAIMKAADEVA 59 usage_00049.pdb 1 AQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVA 60 usage_00057.pdb 1 AQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQ-DYGLDPKIANAIMKAADEVA 59 usage_00058.pdb 1 AQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQ-DYGLDPKIANAIMKAADEVA 59 usage_00059.pdb 1 AQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQ-DYGLDPKIANAIMKAADEVA 59 usage_00060.pdb 1 AQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQ-DYGLDPKIANAIMKAADEVA 59 Q RS NFkIG e P A G K aAA N Ldp I AI AA EV usage_00001.pdb 58 DGKLDEHFPLVVWQTGSGTQSN-NANEVVSNRAIELLGGV-GSKKPVHPNDHVN-SQSSN 114 usage_00002.pdb 57 DGKLDEHFPLVVWQTGSGTQSN-NANEVVSNRAIELLGGV-GSKKPVHPNDHVN-SQSSN 113 usage_00011.pdb 61 QGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKY-AHPNDHVNRGQSSN 119 usage_00015.pdb 60 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 119 usage_00049.pdb 61 SGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEI----------VHPNNHCNQSQSSN 110 usage_00057.pdb 60 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 119 usage_00058.pdb 60 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 119 usage_00059.pdb 60 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 119 usage_00060.pdb 60 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 119 GKl HFPLVV QTGSGTQ N N NEV sNRAiE vHPNdHvN sQSSN usage_00001.pdb 115 DTYPTA-HIACAERVI--------------------- 129 usage_00002.pdb 114 DTYPTA-HIACAERVIHDLLPALKHLHKALEEKVKA- 148 usage_00011.pdb 120 DTFPTAMYVAVALALHQ-------------------- 136 usage_00015.pdb 120 DTFPTAMHIAAAIEVHEV------------------- 137 usage_00049.pdb 111 DTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEF 147 usage_00057.pdb 120 DTFPTAMHIAAAIEVH--------------------- 135 usage_00058.pdb 120 DTFPTAMHIAAAIEVH--------------------- 135 usage_00059.pdb 120 DTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEF 156 usage_00060.pdb 120 DTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEF 156 DT PTa hiA a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################