################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:47:21 2021 # Report_file: c_0197_7.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00081.pdb # 4: usage_00086.pdb # 5: usage_00087.pdb # 6: usage_00107.pdb # 7: usage_00108.pdb # 8: usage_00126.pdb # # Length: 190 # Identity: 112/190 ( 58.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/190 ( 61.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/190 ( 3.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 RLDDHITRLEASCTKLRLRLPLPRDQVKQILVEMVAKSGIRDAFVELIVTRGLKG-VRGT 59 usage_00080.pdb 1 RLDDHITRLEASCTKLRLRLPLPRDQVKQILVEMVAKSGIRDAFVELIVTRGLKG-VRGT 59 usage_00081.pdb 1 -LDDHLQRILESCDKMRLKFPLALSSVKNILAEMVAKSGIRDAFVEVIVTRGLTG-VRGS 58 usage_00086.pdb 1 -LEDHLNRLEASCKKMRLRMPLPREEVIKTLVDMVAKSGIRDAFVELIVTRGLTG-VRGA 58 usage_00087.pdb 1 -LEDHLNRLEASCKKMRLRMPLPREEVIKTLVDMVAKSGIRDAFVELIVTRGLTG-VRGA 58 usage_00107.pdb 1 -LDDHLQRILESCDKMRLKFPLALSSVKNILAEMVAKSGIRDAFVEVIVTRGLTG-VRGS 58 usage_00108.pdb 1 RLDDHLQRILESCDKMRLKFPLALSSVKNILAEMVAKSGIRDAFVEVIVTRGLTGVRGSK 60 usage_00126.pdb 1 RLEDHLNRLEASCKKMRLRMPLPREEVIKTLVDMVAKSGIRDAFVELIVTRGLTG-VRGA 59 L DH R SC K RL PL V L MVAKSGIRDAFVE IVTRGL G vrg usage_00079.pdb 60 RPE--DI-VNNLYMFVQPYVWVMEPDMQRVGGSAVVARTVRRVPPGAIDPTVKNLQWGDL 116 usage_00080.pdb 60 RPE--DI-VNNLYMFVQPYVWVMEPDMQRVGGSAVVARTVRRVPPGAIDPTVKNLQWGDL 116 usage_00081.pdb 59 KPE--DLYNNNIYLLVLPYIWVMAPENQLHGGEAIITRTVRRTPPGAFDPTIKNLQWGDL 116 usage_00086.pdb 59 KPE--ELLNNNLYMFIQPYVWVMDPDVQYTGGRAIVARTVRRVPPGSIDPTIKNLQWGDL 116 usage_00087.pdb 59 KPE--ELLNNNLYMFIQPYVWVMDPDVQYTGGRAIVARTVRRVPPGSIDPTIKNLQWGDL 116 usage_00107.pdb 59 KPE--DLYNNNIYLLVLPYIWVMAPENQLHGGEAIITRTVRRTPPGAFDPTIKNLQWGDL 116 usage_00108.pdb 61 PEDLY---NNNIYLLVLPYIWVMAPENQLHGGEAIITRTVRRTPPGAFDPTIKNLQWGDL 117 usage_00126.pdb 60 KPE--ELLNNNLYMFIQPYVWVMDPDVQYTGGRAIVARTVRRVPPGSIDPTIKNLQWGDL 117 pe NN Y PY WVM P Q GG A RTVRR PPG DPT KNLQWGDL usage_00079.pdb 117 VRGMFEAADRGATYPFLTDGDAHLTEGSGFNIVLVKDGVLYTPDRGVLQGVTRKSVINAA 176 usage_00080.pdb 117 VRGMFEAADRGATYPFLTDGDAHLTEGSGFNIVLVKDGVLYTPDRGVLQGVTRKSVINAA 176 usage_00081.pdb 117 TKGLFEAMDRGATYPFLTDGDTNLTEGSGFNIVLVKNGIIYTPDRGVLRGITRKSVIDVA 176 usage_00086.pdb 117 VRGLFEANDRGATYPFLTDGDANLTEGSGFNVVLIKDGVLYTPDRGVLQGITRKSVIDAA 176 usage_00087.pdb 117 VRGLFEANDRGATYPFLTDGDANLTEGSGFNVVLIKDGVLYTPDRGVLQGITRKSVIDAA 176 usage_00107.pdb 117 TKGLFEAMDRGATYPFLTDGDTNLTEGSGFNIVLVKNGIIYTPDRGVLRGITRKSVIDVA 176 usage_00108.pdb 118 TKGLFEAMDRGATYPFLTDGDTNLTEGSGFNIVLVKNGIIYTPDRGVLRGITRKSVIDVA 177 usage_00126.pdb 118 VRGLFEANDRGATYPFLTDGDANLTEGSGFNVVLIKDGVLYTPDRGVLQGITRKSVIDAA 177 G FEA DRGATYPFLTDGD LTEGSGFN VL K G YTPDRGVL G TRKSVI A usage_00079.pdb 177 EAFGIEVRVE 186 usage_00080.pdb 177 EAFGIEVRVE 186 usage_00081.pdb 177 RANSIDIRLE 186 usage_00086.pdb 177 RSCGYEIRVE 186 usage_00087.pdb 177 RSCGYEIRVE 186 usage_00107.pdb 177 RANSIDIRLE 186 usage_00108.pdb 178 RANSIDIRLE 187 usage_00126.pdb 178 RSCGYEIRVE 187 R E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################