################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:08 2021 # Report_file: c_1079_17.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00300.pdb # 2: usage_00531.pdb # 3: usage_00532.pdb # 4: usage_00546.pdb # 5: usage_00547.pdb # 6: usage_00548.pdb # 7: usage_00549.pdb # # Length: 65 # Identity: 25/ 65 ( 38.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 65 ( 46.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/ 65 ( 15.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00300.pdb 1 HPTGCEANVKKQIDYVTTEG-P---I-ANGPKRVLVIGASTGYGLAARITAAFG-CGADT 54 usage_00531.pdb 1 --YGCRREVLNQIDYCKKAI-G-----FRGPKKVLIVGASSGFGLATRISVAFGGPEAHT 52 usage_00532.pdb 1 --YGCRREVLNQIDYCKKAI-G-----FRGPKKVLIVGASSGFGLATRISVAFGGPEAHT 52 usage_00546.pdb 1 HPQGCKKGVEDQIEYTKKRITAEVKAGAKAPKNVLVLGCSNGYGLASRITAAFG-YGAAT 59 usage_00547.pdb 1 --QGCKKGVEDQIEYTKKRITAEVKAGAKAPKNVLVLGCSNGYGLASRITAAFG-YGAAT 57 usage_00548.pdb 1 --QGCKKGVEDQIEYTKKRITAEVKAGAKAPKNVLVLGCSNGYGLASRITAAFG-YGAAT 57 usage_00549.pdb 1 --QGCKKGVEDQIEYTKKRITAEVKAGAKAPKNVLVLGCSNGYGLASRITAAFG-YGAAT 57 GC V QI Y kk i PK VL G S G GLA RI AFG A T usage_00300.pdb 55 LGVF- 58 usage_00531.pdb 53 IGVS- 56 usage_00532.pdb 53 IGVS- 56 usage_00546.pdb 60 IGVSF 64 usage_00547.pdb 58 IGVS- 61 usage_00548.pdb 58 IGVS- 61 usage_00549.pdb 58 IGVSF 62 iGVs #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################