################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:30 2021 # Report_file: c_0378_52.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00010.pdb # 2: usage_00011.pdb # 3: usage_00019.pdb # 4: usage_00032.pdb # 5: usage_00078.pdb # 6: usage_00213.pdb # 7: usage_00339.pdb # 8: usage_00380.pdb # 9: usage_00401.pdb # 10: usage_00631.pdb # 11: usage_00880.pdb # 12: usage_00959.pdb # # Length: 102 # Identity: 73/102 ( 71.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 73/102 ( 71.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 29/102 ( 28.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00010.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 60 usage_00011.pdb 1 -----SFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 55 usage_00019.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYW-------KTAK 53 usage_00032.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYW-------KTAK 53 usage_00078.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYW----SGKKTAK 56 usage_00213.pdb 1 QPTIQSFEQ---KVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYW-----GKKTAK 52 usage_00339.pdb 1 -----SFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 55 usage_00380.pdb 1 -----SFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 55 usage_00401.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 60 usage_00631.pdb 1 QPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 60 usage_00880.pdb 1 -----SFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAK 55 usage_00959.pdb 1 -----SFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWK--SSGKKTAK 53 SFEQ KVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYW KTAK usage_00010.pdb 61 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKST-------- 94 usage_00011.pdb 56 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMG 97 usage_00019.pdb 54 TNTNEFLIDV------CFSVQAVIPSRTVNRKSTDSPVEC-- 87 usage_00032.pdb 54 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 94 usage_00078.pdb 57 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 97 usage_00213.pdb 53 TNTNEFLIDV----Y-CFSVQAVIPSRTVNRKSTDSPVECM- 88 usage_00339.pdb 56 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 96 usage_00380.pdb 56 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKST-------- 89 usage_00401.pdb 61 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 101 usage_00631.pdb 61 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 101 usage_00880.pdb 56 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM- 96 usage_00959.pdb 54 TNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKST-------- 87 TNTNEFLIDV CFSVQAVIPSRTVNRKST #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################