################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:35:31 2021 # Report_file: c_0224_10.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00016.pdb # 4: usage_00061.pdb # 5: usage_00086.pdb # 6: usage_00094.pdb # 7: usage_00095.pdb # 8: usage_00120.pdb # 9: usage_00121.pdb # 10: usage_00153.pdb # 11: usage_00154.pdb # # Length: 135 # Identity: 116/135 ( 85.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 118/135 ( 87.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/135 ( 11.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 PLVVRA------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00003.pdb 1 PLVVRA------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00016.pdb 1 PLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDG 60 usage_00061.pdb 1 PLVVRP------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00086.pdb 1 PL-VVR------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 44 usage_00094.pdb 1 PLVVRP------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00095.pdb 1 PLVVRP------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00120.pdb 1 PLVVRPS-----A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 46 usage_00121.pdb 1 PLVVRPS-----A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 46 usage_00153.pdb 1 PLVVRP------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 usage_00154.pdb 1 PLVVRP------A-MEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDG 45 PL Vr a MEIVYDEADLRRYFQTA VLLDHFLDDAVEVDVDAICDG usage_00002.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00003.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00016.pdb 61 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 120 usage_00061.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00086.pdb 45 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 104 usage_00094.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00095.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00120.pdb 47 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 106 usage_00121.pdb 47 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 106 usage_00153.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 usage_00154.pdb 46 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF 105 EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQF usage_00002.pdb 106 AVKNNEVYLIEVNPR 120 usage_00003.pdb 106 AVKNNEVYLIEVNPR 120 usage_00016.pdb 121 AVKNNEVYLIEVNPR 135 usage_00061.pdb 106 AVKNNEVYLIEVNPR 120 usage_00086.pdb 105 AVKNNEVYLIEVNPR 119 usage_00094.pdb 106 AVKNNEVYLIEVNPR 120 usage_00095.pdb 106 AVKNNEVYLIEVNPR 120 usage_00120.pdb 107 AVKNNEVYLIEVNPR 121 usage_00121.pdb 107 AVKNNEVYLIEVNPR 121 usage_00153.pdb 106 AVKNNEVYLIEVNPR 120 usage_00154.pdb 106 AVKNNEVYLIEVNPR 120 AVKNNEVYLIEVNPR #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################