################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:03:57 2021 # Report_file: c_1269_81.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00086.pdb # 2: usage_00098.pdb # 3: usage_00413.pdb # 4: usage_00414.pdb # 5: usage_00541.pdb # 6: usage_00542.pdb # 7: usage_00543.pdb # 8: usage_00934.pdb # 9: usage_01030.pdb # 10: usage_01031.pdb # 11: usage_01067.pdb # 12: usage_01068.pdb # 13: usage_01294.pdb # # Length: 29 # Identity: 10/ 29 ( 34.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 29 ( 44.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 29 ( 3.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00086.pdb 1 TVMIAAHGNSLRGLVKHLEGISDADIAKL 29 usage_00098.pdb 1 QVLIAAHGNSLRALIKYLDGISDADIVGL 29 usage_00413.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_00414.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_00541.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_00542.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_00543.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_00934.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_01030.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_01031.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 usage_01067.pdb 1 SVLVSAHGNSLRALLYLLEGMTPEQILE- 28 usage_01068.pdb 1 SVLVSAHGNSLRALLYLLEGMTPEQILEV 29 usage_01294.pdb 1 TILISAHGNSSRALLKHLEGISDEDIINI 29 l AHGNS RaL LeG I #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################