################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:27 2021 # Report_file: c_1490_43.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00997.pdb # 2: usage_01031.pdb # 3: usage_01316.pdb # 4: usage_01317.pdb # 5: usage_01318.pdb # 6: usage_01319.pdb # # Length: 40 # Identity: 3/ 40 ( 7.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 40 ( 65.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 40 ( 32.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00997.pdb 1 YPLEAVRMQHLIAREAEAAI-Y--HLQLFEELRRLA---- 33 usage_01031.pdb 1 -----NRLKQSTFESSFYGVVELAL-RYENLLPQLREMKQ 34 usage_01316.pdb 1 ---EAVRMQNLIAREAEAAI-Y--HLQLFEELRRLA---- 30 usage_01317.pdb 1 YPLEAVRMQNLIAREAEAAI-Y--HLQLFEELRRLA---- 33 usage_01318.pdb 1 YPLEAVRMQNLIAREAEAAI-Y--HLQLFEELRRLA---- 33 usage_01319.pdb 1 YPLEAVRMQNLIAREAEAAI-Y--HLQLFEELRRLA---- 33 vRmq liareaeaai y h qlfeeLrrLa #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################