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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:18:12 2021
# Report_file: c_1138_10.html
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#====================================
# Aligned_structures: 5
#   1: usage_00156.pdb
#   2: usage_00204.pdb
#   3: usage_00205.pdb
#   4: usage_00218.pdb
#   5: usage_00219.pdb
#
# Length:        134
# Identity:       48/134 ( 35.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     86/134 ( 64.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           47/134 ( 35.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00156.pdb         1  ---VFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIF------------   45
usage_00204.pdb         1  AASLFKKLLAGSLV-LGAGFAGEAGLAPVLPAFIIGA-GWLY-IYELY-GEGKAAVSTAS   56
usage_00205.pdb         1  AASLFKKLLAGSLV-LGAGFAGEAGLAPVLPAFIIGA-GWLY-IYELY-GEG-------S   49
usage_00218.pdb         1  --SLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTAS   58
usage_00219.pdb         1  AASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAA--VSS   58
                              lFkKLLagSLV LgaGFaGEAGLapVlpafIiG  gWLY IYEly            

usage_00156.pdb        46  --SQQAFNTIKWIVTVGWAIYPIGYAWGYFGDG-LNEDALNIVYNLADLINKA-------   95
usage_00204.pdb        57  PAVNSAYNA---IIVVGWAIYPAGYAAGYL-G--VYASNLNLIYNLADFVNKILFGLIIW  110
usage_00205.pdb        50  PAVNSAYNA---IIVVGWAIYPAGYAAGYL-G--VYASNLNLIYNLADFVNKILFGLIIW  103
usage_00218.pdb        59  PAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGGVYASNLNLIYNLADFVNKILFGLIIW  118
usage_00219.pdb        59  PAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMG--VYASNLNLIYNLADFVNKILFGLIIW  116
                             vnsAyNa   IivVGWAIYPaGYAaGYl g  vyasnLNliYNLADfvNKi       

usage_00156.pdb            --------------     
usage_00204.pdb       111  NVAVKESSNAL---  121
usage_00205.pdb       104  NVAVKESSNAL---  114
usage_00218.pdb       119  NVAVKESSNAKL--  130
usage_00219.pdb       117  NVAVKESSNAKLLE  130
                                         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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