################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:25 2021 # Report_file: c_1187_23.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00010.pdb # 4: usage_00090.pdb # 5: usage_00191.pdb # 6: usage_00566.pdb # 7: usage_00596.pdb # 8: usage_01024.pdb # # Length: 68 # Identity: 0/ 68 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 68 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/ 68 ( 79.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 ----G-----------VYTIRK-E--------G---DEY-K-IAYYNP--ETQE-SAPDQ 28 usage_00003.pdb 1 ----G-----------VYTIRK-E--------G---DEY-K-IAYYNP--ETQE-SAPDQ 28 usage_00010.pdb 1 ISADD-----------TQSVFEHY--------DGYWGDKPTYERLEAK--V--------- 30 usage_00090.pdb 1 ----G-----------VYTIRK-E--------G---DEY-K-IAYYNP--ETQE-SAPDQ 28 usage_00191.pdb 1 -------------------KKQ-T--------N---DYY-I-LYNPA----LPR--EIDV 21 usage_00566.pdb 1 -----GIRYPLTFGWCYKLVPV-EPEKLEEANK---DDP-E-REVLEW------------ 37 usage_00596.pdb 1 ----G-----------VYTIRK-E--------G---DEY-K-IAYYNP--ETQE-SAPDQ 28 usage_01024.pdb 1 ------------------TIRK-D--------G---LKL-V-GSWKKDRA-TGDA-DEPE 26 usage_00002.pdb 29 EVFKKL-- 34 usage_00003.pdb 29 EVFKKL-- 34 usage_00010.pdb -------- usage_00090.pdb 29 EVFKKLE- 35 usage_00191.pdb 22 -----EL- 23 usage_00566.pdb -------- usage_00596.pdb 29 EVFKKL-- 34 usage_01024.pdb 27 -----LRV 29 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################