################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:10:37 2021 # Report_file: c_1103_4.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00034.pdb # 2: usage_00035.pdb # 3: usage_00079.pdb # 4: usage_00080.pdb # 5: usage_00094.pdb # 6: usage_00095.pdb # 7: usage_00160.pdb # 8: usage_00263.pdb # 9: usage_00285.pdb # 10: usage_00286.pdb # 11: usage_00301.pdb # 12: usage_00335.pdb # 13: usage_00336.pdb # 14: usage_00338.pdb # # Length: 138 # Identity: 27/138 ( 19.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/138 ( 37.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/138 ( 26.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00034.pdb 1 --------DPMVTLSSILESIIN-DMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTL 51 usage_00035.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00079.pdb 1 -------DDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 53 usage_00080.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00094.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00095.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00160.pdb 1 ---------DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 51 usage_00263.pdb 1 ---------TIEQLSYLLKFAIQ-KMKQ-PGTDAFQKPVPLEQHPDYAEYIFHPMDLCTL 49 usage_00285.pdb 1 ---------DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 51 usage_00286.pdb 1 -------DDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 53 usage_00301.pdb 1 GTENLYFQSMQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETI 60 usage_00335.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00336.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 usage_00338.pdb 1 --------DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETI 52 v S iL i kM P pFh PVn k vpDYyk I PmDL T usage_00034.pdb 52 RENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEK------ 105 usage_00035.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 106 usage_00079.pdb 54 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 107 usage_00080.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 106 usage_00094.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYD----- 107 usage_00095.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYD----- 107 usage_00160.pdb 52 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 105 usage_00263.pdb 50 EKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVC--- 106 usage_00285.pdb 52 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTE------- 104 usage_00286.pdb 54 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTE------- 106 usage_00301.pdb 61 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITEYDEHLTQ 120 usage_00335.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 106 usage_00336.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 106 usage_00338.pdb 53 RKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY------ 106 rkN K Y srE Fl d lIl Ns YNGp T aq C E usage_00034.pdb ------------------ usage_00035.pdb ------------------ usage_00079.pdb ------------------ usage_00080.pdb ------------------ usage_00094.pdb ------------------ usage_00095.pdb ------------------ usage_00160.pdb ------------------ usage_00263.pdb ------------------ usage_00285.pdb ------------------ usage_00286.pdb ------------------ usage_00301.pdb 121 LEKDICTAKEAALEEAEL 138 usage_00335.pdb ------------------ usage_00336.pdb ------------------ usage_00338.pdb ------------------ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################