################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:55:35 2021 # Report_file: c_0008_11.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00082.pdb # # Length: 304 # Identity: 64/304 ( 21.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 268/304 ( 88.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/304 ( 11.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 GIFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTI 60 usage_00008.pdb 1 GIFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTI 60 usage_00082.pdb 1 GTFAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRF 60 GiFpvvPTtFaDtGdlDlaSqkRavDFmidaGsdGlciLanfsEqfaitddErdvltrti usage_00007.pdb 61 LEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH-GATFRVPEAQIFEFY 119 usage_00008.pdb 61 LEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH-GATFRVPEAQIFEFY 119 usage_00082.pdb 61 IKRAK-S-QVIVGVSAPGFAA-RRLARLS-DAGAAGVIA-----PPPSL-RTDEQITTYF 110 lehva r pVIVttShystqv aarslra qlGAAmVmA gatf vpeaQIfefy usage_00007.pdb 120 ARVSDAIA--IPIMVQDAP-ASGTALSAPFLARMAREIEQVAYFKIETPGAANKLRELIR 176 usage_00008.pdb 120 ARVSDAIA--IPIMVQDAP-ASGTALSAPFLARMAREIEQVAYFKIETPGAANKLRELIR 176 usage_00082.pdb 111 RQATEAIGDDVPWVLQDYPLTLSV-VTPKVIRQIVD-SASC-VLKHEDWPGLEKITTLRG 167 arvsdAIa iPimvQDaP asgt lsapflarmar ieqv yfKiEtpgaanKlreLir usage_00007.pdb 177 LGG-DAI--EGPWDGEEAITLLADLHAGATGAMTGGGFPD-----GIRPILEAWREGRHD 228 usage_00008.pdb 177 LGG-DAI--EGPWDGEEAITLLADLHAGATGAMTGGGFPD-----GIRPILEAWREGRHD 228 usage_00082.pdb 168 FQKDGSLRPLSILCGNGGLFLDFE-ERGADGAT-------GYCFPDLVDVVKLSKAGQRD 219 lgg dai egpwdGeeaitLlad haGAtGAm girpileawreGrhD usage_00007.pdb 229 DAYARYQAWLPLINHENRQ--SGILTAKALMREGGVIASERPRHPMPELHPDTRAELLAI 286 usage_00008.pdb 229 DAYARYQAWLPLINHENRQ--SGILTAKALMREGGVIASERPRHPMPELHPDTRAELLAI 286 usage_00082.pdb 220 LAHNLFDAHLPLIRYEHQ-QGVGLSVRKYVLKKRGLLSSSAQRKPGASLTDTAREEVDYL 278 dAyaryqAwLPLInhEnr sGiltaKalmregGviaSerpRhPmpeLhpdtRaEllai usage_00007.pdb 287 ARRL 290 usage_00008.pdb 287 ARRL 290 usage_00082.pdb 279 LSRL 282 arRL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################