################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:01:05 2021 # Report_file: c_0545_10.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00630.pdb # 2: usage_00631.pdb # 3: usage_00777.pdb # 4: usage_00778.pdb # 5: usage_00779.pdb # # Length: 159 # Identity: 141/159 ( 88.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 141/159 ( 88.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/159 ( 10.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00630.pdb 1 --------FQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA 52 usage_00631.pdb 1 LYILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA 60 usage_00777.pdb 1 LYILSSYLFQFGDQFSEAFLLDV-SIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA 59 usage_00778.pdb 1 LYILSSYLFQFGDQFSEAFLLDV-SIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA 59 usage_00779.pdb 1 LYILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA 60 FQFGDQFSEAFLLDV SIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFA usage_00630.pdb 53 EYYMDLLDNSESNVDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKMDLAQIVQ 112 usage_00631.pdb 61 EYYMDLLDN----VDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKMDLAQIVQ 116 usage_00777.pdb 60 EYYD-LLDN----VDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIK-DLAQIVQ 113 usage_00778.pdb 60 EYYD-LLDN----VDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIK-DLAQIVQ 113 usage_00779.pdb 61 EYYMDLLDNSESNVDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKMDLAQIVQ 120 EYY LLDN VDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIK DLAQIVQ usage_00630.pdb 113 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAYS- 150 usage_00631.pdb 117 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAYS- 154 usage_00777.pdb 114 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAY-- 150 usage_00778.pdb 114 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAYS- 151 usage_00779.pdb 121 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAYSA 159 DEASQDNYLKEACNAIKEAQGSGVELSPDYVEFVEAY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################