################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:47:40 2021 # Report_file: c_1012_5.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00203.pdb # 2: usage_00204.pdb # 3: usage_00408.pdb # 4: usage_00473.pdb # 5: usage_00598.pdb # 6: usage_00599.pdb # 7: usage_00600.pdb # 8: usage_00601.pdb # 9: usage_00602.pdb # 10: usage_00603.pdb # 11: usage_00604.pdb # 12: usage_00605.pdb # # Length: 60 # Identity: 11/ 60 ( 18.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 60 ( 35.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 60 ( 20.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00203.pdb 1 NSLTILV-GKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPV-VSRSRAGFTLNIIDTP- 56 usage_00204.pdb 1 NSLTILV-GKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPV-VSRSRAGFTLNIIDTP- 56 usage_00408.pdb 1 SQLRIVLVGKTGAGKSATGNSILGRKVFHS-------TKKCEKRSSSWKETELVVVDTPG 53 usage_00473.pdb 1 SELRIILVGKTGTGKSAAGNSILRKQAF----T-L--TKTCSKSQGSWGNREIVIIDTP- 52 usage_00598.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00599.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSGPRPVM-VSRSRAGFTLNIIDTP- 57 usage_00600.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00601.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00602.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00603.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00604.pdb 1 NSLTILVMGKGGVGKSSTVNSIIGERVVSISP-FQSEGPRPVMVSRSRAGFTLNIIDTP- 58 usage_00605.pdb 1 NSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSP--F--GLRPVMVSRTMGGFTINIIDTP- 55 l i GK G GKS t NSi g v s s iiDTP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################