################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:21:54 2021 # Report_file: c_0255_6.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00002.pdb # 2: usage_00012.pdb # 3: usage_00013.pdb # 4: usage_00014.pdb # 5: usage_00015.pdb # 6: usage_00016.pdb # 7: usage_00017.pdb # 8: usage_00018.pdb # 9: usage_00019.pdb # 10: usage_00027.pdb # 11: usage_00028.pdb # 12: usage_00042.pdb # 13: usage_00043.pdb # 14: usage_00044.pdb # 15: usage_00045.pdb # 16: usage_00066.pdb # 17: usage_00079.pdb # 18: usage_00080.pdb # 19: usage_00083.pdb # 20: usage_00084.pdb # # Length: 178 # Identity: 28/178 ( 15.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 39/178 ( 21.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/178 ( 16.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 CNLDSARFRYLMGERLGVHALSCHGWILGEHGDSSVPVWSGMNVAGVSLKTLHP---E-- 55 usage_00012.pdb 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00013.pdb 1 -SLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 59 usage_00014.pdb 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00015.pdb 1 TSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00016.pdb 1 -SLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 59 usage_00017.pdb 1 TSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00018.pdb 1 -SLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 59 usage_00019.pdb 1 TSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00027.pdb 1 -TLDTTRFRKEIALKLAVDPRSVHGYILGEHGDSEVAAWSHTTVGGKPIMEYVEKDHRLE 59 usage_00028.pdb 1 -TLDTTRFRKEIALKLAVDPRSVHGYILGEHGDSEVAAWSHTTVGGKPIMEYVEKDHRLE 59 usage_00042.pdb 1 --LDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 58 usage_00043.pdb 1 -SLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 59 usage_00044.pdb 1 --LDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 58 usage_00045.pdb 1 -SLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 59 usage_00066.pdb 1 TSLDTARLRYEISQYIHIDSRNVHAYILGEHGDSEFVCWSNANVGAKPIADVIDSMDEIS 60 usage_00079.pdb 1 TSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00080.pdb 1 TSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 usage_00083.pdb 1 --LDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHP---D-- 53 usage_00084.pdb 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60 LD RfR v s H i GEHGD WS g usage_00002.pdb 56 LGTDADKE-QWKQVHKQVVDSAYEVIKLKGYTTWAIGLSVADLAESIMKNLRRVHPISTM 114 usage_00012.pdb 61 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00013.pdb 60 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 112 usage_00014.pdb 61 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00015.pdb 61 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00016.pdb 60 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 112 usage_00017.pdb 61 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00018.pdb 60 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 112 usage_00019.pdb 61 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00027.pdb 60 -------ENDLTVLADKVKNAAYEIIDRKKATYYGIGMSTTRIVKAILNNEQAVLPVSAY 112 usage_00028.pdb 60 -------ENDLTVLADKVKNAAYEIIDRKKATYYGIGMSTTRIVKAILNNEQAVLPVSAY 112 usage_00042.pdb 59 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 111 usage_00043.pdb 60 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 112 usage_00044.pdb 59 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 111 usage_00045.pdb 60 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 112 usage_00066.pdb 61 -------FEDLEHIYLKVRDAAYEIISRKKATYYGIGMALVRITAAIFNNENRILPISVL 113 usage_00079.pdb 61 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00080.pdb 61 -------EDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 usage_00083.pdb 54 LGTDKDKE-QWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTM 112 usage_00084.pdb 61 -------EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVY 113 e V AYE I K T I I v P S usage_00002.pdb 115 LKGLYGI-KE-DVFLSVPCVLGQNGISDVVKVTLTSEEEAHLKKSADTLWGIQKEL-- 168 usage_00012.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFA 168 usage_00013.pdb 113 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 166 usage_00014.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 167 usage_00015.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVL----- 163 usage_00016.pdb 113 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 166 usage_00017.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 167 usage_00018.pdb 113 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 166 usage_00019.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFA 168 usage_00027.pdb 113 LNGEYGE-ED-IFTGVP-SIVDENGVREIIDLSITPQEKAMFHQSVSELKAVLDTV-- 165 usage_00028.pdb 113 LNGEYGE-ED-IFTGVP-SIVDENGVREIIDLSITPQEKAMFHQSVSELKAVLDTV-- 165 usage_00042.pdb 112 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 165 usage_00043.pdb 113 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVL----- 162 usage_00044.pdb 112 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 165 usage_00045.pdb 113 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 166 usage_00066.pdb 114 NNGVYDCEDQ-VYIGLP-AVLNKDGVHHIVKLKLNEKENSQLNNSANILRKNLDDMS- 168 usage_00079.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSA------------ 156 usage_00080.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAF- 167 usage_00083.pdb 113 IKGLYGI-KDDVFLSVP-CILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKEL-- 166 usage_00084.pdb 114 MDGQYGL-ND-IYIGTP-AVINRNGIQNILEIPLTDHEEESMQKSA------------ 156 G Yg p nG t E S #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################