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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:09:06 2021
# Report_file: c_0689_15.html
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#====================================
# Aligned_structures: 9
#   1: usage_00004.pdb
#   2: usage_00005.pdb
#   3: usage_00033.pdb
#   4: usage_00034.pdb
#   5: usage_00035.pdb
#   6: usage_00041.pdb
#   7: usage_00108.pdb
#   8: usage_00111.pdb
#   9: usage_00112.pdb
#
# Length:         61
# Identity:        7/ 61 ( 11.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/ 61 ( 26.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/ 61 ( 23.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00004.pdb         1  DIYIVFAMTD---KSKGNH-GITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKV   56
usage_00005.pdb         1  DIYIVFAMTD---KSKGNH-GITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKV   56
usage_00033.pdb         1  SAAVVFASTD---RALQNK-SISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRI   56
usage_00034.pdb         1  SAAVVFASTD---RALQNK-SISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRI   56
usage_00035.pdb         1  SAAVVFASTD----------SISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRI   50
usage_00041.pdb         1  THYVVSTRLEEGA-----PVRLAAPVVARTTPGLTVLDNWDGMGMRSSGSVDIVFDGCPV   55
usage_00108.pdb         1  DVLVVYAKTD---P--P-R-GITAFLVEKAFPGFSAGQKLDKLG-RGSNTSELIFTDCEV   52
usage_00111.pdb         1  DVLVVYAKT-------------SAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEV   47
usage_00112.pdb         1  DVLVVYAKT-----------GISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEV   49
                               V a t              Af       G     k Dk G   S t  l F d   

usage_00004.pdb        57  P   57
usage_00005.pdb        57  P   57
usage_00033.pdb        57  P   57
usage_00034.pdb        57  P   57
usage_00035.pdb        51  P   51
usage_00041.pdb        56  D   56
usage_00108.pdb        53  P   53
usage_00111.pdb        48  P   48
usage_00112.pdb        50  P   50
                           p


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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