################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:14:29 2021 # Report_file: c_0061_3.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00024.pdb # 2: usage_00035.pdb # 3: usage_00036.pdb # 4: usage_00037.pdb # 5: usage_00038.pdb # 6: usage_00077.pdb # 7: usage_00078.pdb # 8: usage_00093.pdb # 9: usage_00094.pdb # 10: usage_00095.pdb # # Length: 210 # Identity: 100/210 ( 47.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 115/210 ( 54.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/210 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 TQMTYKVYMSGTVNGHYFEVEGDGKGRPYEGEQTVKLTVTKGGPLPFAWDILSPQCSIPF 60 usage_00035.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00036.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00037.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00038.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00077.pdb 1 -----------------FEIKGKGKGQPNEGTNTVTLEVTKGGPLPFGWHILCPQFNKAF 43 usage_00078.pdb 1 --MLIDLHLEGTF--HYFEIKGKGKGQPNEGTNTVTLEVTKGGPLPFGWHILCPQFNKAF 56 usage_00093.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00094.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 usage_00095.pdb 1 KQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQLSIPF 60 FE G GKG P EG TV L VTKGGPLPF W IL PQ F usage_00024.pdb 61 TKYPEDIPDYVKQSFPEGFTWERIMNFEDGAVCTVSNDSSIQGNCFTYHVKFSGLNFPPN 120 usage_00035.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00036.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00037.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00038.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00077.pdb 44 VHHPDNIHDYLKLSFPEGYTWERSMHFEDGGLCCITNDISLTGNCFYYDIKFTGLNFPPN 103 usage_00078.pdb 57 VHHPDNIHDYLKLSFPEGYTWERSMHFEDGGLCCITNDISLTGNCFYYDIKFTGLNFPPN 116 usage_00093.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00094.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 usage_00095.pdb 61 TKYPEDIPDYFKQSFPEGYTWERSMNFEDGAVCTVSNDSSIQGNCFIYNVKISGENFPPN 120 P I DY K SFPEGyTWERsM FEDG C ND S GNCF Y K G NFPPN usage_00024.pdb 121 GPVMQKKTQGWEPHSERLFARGGMLIGNNFMALKLEGGGHYLCEFKTTYKAKKPV-KMPG 179 usage_00035.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00036.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00037.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00038.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00077.pdb 104 GPVVQKKTTGWEPSTERLYPRDGVLIGDIHHALTVEGGGHYACDIKTVYRAKKAA-LKMP 162 usage_00078.pdb 117 GPVVQKKTTGWEPSTERLYPRDGVLIGDIHHALTVEGGGHYACDIKTVYRAKKAALKMPG 176 usage_00093.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00094.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 usage_00095.pdb 121 GPVMQKKTQGWEPSTERLFARDGMLIGNDYMALKLEGGGHYLCEFKSTYKAKKPV-RMPG 179 GPV QKKT GWEPstERL RdG LIG AL EGGGHY C K Y AKK mpg usage_00024.pdb 180 YHYVDRKLDVTNHNKDYT-SVEQCEISIA- 207 usage_00035.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 usage_00036.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 usage_00037.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 usage_00038.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIAR 208 usage_00077.pdb 163 GYHYVDTKLVIWNNDKEFMKVEEHEIAVA- 191 usage_00078.pdb 177 YHYVDTKLVIWNNDKEFM-KVEEHEIAVA- 204 usage_00093.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 usage_00094.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 usage_00095.pdb 180 RHEIDRKLDVTSHNRDYT-SVEQCEIAIA- 207 h d kl v n VE EIa A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################