################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:09:22 2021 # Report_file: c_0932_194.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00461.pdb # 2: usage_01774.pdb # 3: usage_01775.pdb # 4: usage_01776.pdb # 5: usage_01777.pdb # 6: usage_01778.pdb # 7: usage_01779.pdb # 8: usage_01780.pdb # 9: usage_01781.pdb # 10: usage_02281.pdb # # Length: 47 # Identity: 2/ 47 ( 4.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 28/ 47 ( 59.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 47 ( 40.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00461.pdb 1 -V-DYQWSPDAQRLLFP-LG-GELYLYD-LKQ-EGKAAVRQLT---- 37 usage_01774.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTIG 37 usage_01775.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTIG 37 usage_01776.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTIG 37 usage_01777.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTI- 36 usage_01778.pdb 1 SQSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTI- 37 usage_01779.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTIG 37 usage_01780.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTI- 36 usage_01781.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTI- 36 usage_02281.pdb 1 -QSVAYAPGP-GDMLLFNGGRYYHRVSEVIGNSPR--------RTI- 36 q vayapgp gdmLlf gG yyhrvse ign pr #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################