################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:53:55 2021 # Report_file: c_0449_1.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00026.pdb # 2: usage_00027.pdb # 3: usage_00028.pdb # 4: usage_00029.pdb # 5: usage_00030.pdb # 6: usage_00031.pdb # 7: usage_00032.pdb # 8: usage_00033.pdb # 9: usage_00034.pdb # 10: usage_00035.pdb # 11: usage_00036.pdb # 12: usage_00037.pdb # 13: usage_00038.pdb # 14: usage_00073.pdb # 15: usage_00074.pdb # 16: usage_00075.pdb # 17: usage_00078.pdb # 18: usage_00079.pdb # 19: usage_00085.pdb # 20: usage_00088.pdb # 21: usage_00116.pdb # 22: usage_00117.pdb # 23: usage_00118.pdb # 24: usage_00119.pdb # 25: usage_00120.pdb # 26: usage_00121.pdb # 27: usage_00126.pdb # 28: usage_00127.pdb # 29: usage_00128.pdb # # Length: 137 # Identity: 11/137 ( 8.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 36/137 ( 26.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 50/137 ( 36.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00026.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00027.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00028.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00029.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00030.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00031.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00032.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00033.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQT-QTTY 52 usage_00034.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQT-QTTY 52 usage_00035.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00036.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00037.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00038.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00073.pdb 1 SMVVMGVG-TGGTIIGVAKKLKEVNPSIQIIGVDPIGSILGGGDN--------------- 44 usage_00074.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00075.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00078.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00079.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00085.pdb 1 TSFVAGIG-SGGTFAGTARYLKERIPAIRLIGVEPE-GSI-----LNG------GEPGPH 47 usage_00088.pdb 1 TSFVAGIG-SGGTFAGTARYLKERIPAIRLIGVEPE-GSI-----LNG------GEPGPH 47 usage_00116.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00117.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00118.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00119.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00120.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00121.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00126.pdb 1 DAVVACVGGGS-NAIGIFHAFLD-DPGVRLVGFEAAG----------------------- 35 usage_00127.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 usage_00128.pdb 1 DMLVASVG-TGGTITGIARKLKEKCPGCRIIGVDPE-GSI-----LAEPEELNQTEQTTY 53 Va G g t G a lke P r iGv p usage_00026.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00027.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00028.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00029.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00030.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00031.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00032.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00033.pdb 53 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 110 usage_00034.pdb 53 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 110 usage_00035.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00036.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00037.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00038.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00073.pdb 45 -----------------NL-IDEYIKINDKDSFLMARRLIREEGLLVGGSSGSAVWAACQ 86 usage_00074.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00075.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00078.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00079.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00085.pdb 48 EIEGIGVEFIPPFFE-NLD-IDGFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFVAALK 105 usage_00088.pdb 48 EIEGIGVEFIPPFFE-NLD-IDGFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFVAALK 105 usage_00116.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00117.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00118.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00119.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00120.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00121.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00126.pdb 36 -------------------DRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALK 76 usage_00127.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 usage_00128.pdb 54 EVEGIGYDFIPTVLDR-TV-VDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 111 d D e f r L Gll g s g A k usage_00026.pdb 112 AAQELQEGQRCVVILPD 128 usage_00027.pdb 112 AAQELQEGQRCVVILPD 128 usage_00028.pdb 112 AAQELQEGQRCVVILPD 128 usage_00029.pdb 112 AAQELQEGQRCVVI--- 125 usage_00030.pdb 112 AAQELQEGQRCVVILPD 128 usage_00031.pdb 112 AAQELQEGQRCVVILPD 128 usage_00032.pdb 112 AAQELQEGQRCVVI--- 125 usage_00033.pdb 111 AAQELQEGQRCVVI--- 124 usage_00034.pdb 111 AAQELQEGQRCVVI--- 124 usage_00035.pdb 112 AAQELQEGQRCVVILPD 128 usage_00036.pdb 112 AAQELQEGQRCVVILPD 128 usage_00037.pdb 112 AAQELQEGQRCVVILPD 128 usage_00038.pdb 112 AAQELQEGQRCVVILPD 128 usage_00073.pdb 87 AAQRLKEGERCLVI--- 100 usage_00074.pdb 112 AAQELQEGQRCVVI--- 125 usage_00075.pdb 112 AAQELQEGQRCVVILPD 128 usage_00078.pdb 112 AAQELQEGQRCVVILPD 128 usage_00079.pdb 112 AAQELQEGQRCVVILPD 128 usage_00085.pdb 106 EAQRLPEGSQVLTIFPD 122 usage_00088.pdb 106 EAQRLPEGSQVLTIFPD 122 usage_00116.pdb 112 AAQELQEGQRCVVILPD 128 usage_00117.pdb 112 AAQELQEGQRCVVILPD 128 usage_00118.pdb 112 AAQELQEGQRCVVILPD 128 usage_00119.pdb 112 AAQELQEGQRCVVILPD 128 usage_00120.pdb 112 AAQELQEGQRCVVILPD 128 usage_00121.pdb 112 AAQELQEGQRCVVILPD 128 usage_00126.pdb 77 LGVELGRGAVIVVNLSG 93 usage_00127.pdb 112 AAQELQEGQRCVVI--- 125 usage_00128.pdb 112 AAQELQEGQRCVVI--- 125 aq L eG i #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################