################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:59 2021 # Report_file: c_1387_161.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_01010.pdb # 2: usage_02011.pdb # 3: usage_02112.pdb # 4: usage_02118.pdb # # Length: 80 # Identity: 11/ 80 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 80 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 80 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01010.pdb 1 ------YLSELNTEFRELW-GVLEAGVKDGSFRSDIDVELAFRFLRDTAWVAVRWY-RPG 52 usage_02011.pdb 1 GDDIEKRAKAIYRR-YGHVEQLIAQGQTEGVFRSDSGSDELASIVAAHDGVLIEWYRR-P 58 usage_02112.pdb 1 ------YIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWY-RPG 53 usage_02118.pdb 1 ------YIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWY-RPG 53 y n r w vl qG eG FR D dvdl rf rdt wV vrWY R g usage_01010.pdb 53 GSVTVDTVAKQYLSIVLDG- 71 usage_02011.pdb 59 NELTGKTLTKALRSVLLNG- 77 usage_02112.pdb 54 GPLTAQQVGQQYLAIVL--- 70 usage_02118.pdb 54 GPLTAQQVGQQYLAIVLGGI 73 g lT v qyl ivL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################