################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:58:55 2021 # Report_file: c_1372_59.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00202.pdb # 2: usage_00999.pdb # 3: usage_01000.pdb # 4: usage_01001.pdb # 5: usage_01002.pdb # 6: usage_01003.pdb # 7: usage_01004.pdb # 8: usage_01005.pdb # # Length: 65 # Identity: 26/ 65 ( 40.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 46/ 65 ( 70.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/ 65 ( 24.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00202.pdb 1 FNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 60 usage_00999.pdb 1 FLPSVVGIVVYRGLYFGMYDSL------------LASFLLGWVVTTGASTCSYPLDTVRR 48 usage_01000.pdb 1 FLPSVVGIVVYRGLYFGMYDSLK-----------LASFLLGWVVTTGASTCSYPLDTVRR 49 usage_01001.pdb 1 FLPSVVGIVVYRGLYFGMYDSLK-----------LASFLLGWVVTTGASTCSYPLDTVRR 49 usage_01002.pdb 1 FMPSVVGIVVYRGLYFGMFDSLK-------------F-LLGWVVTTGASTCSYPLDTVRR 46 usage_01003.pdb 1 FMPSVVGIVVYRGLYFGMFDSL--------------F-LLGWVVTTGASTCSYPLDTVRR 45 usage_01004.pdb 1 FMPSVVGIVVYRGLYFGMFDSLKP-L-------FLASFLLGWVVTTGASTCSYPLDTVRR 52 usage_01005.pdb 1 FMPSVVGIVVYRGLYFGMFDSLKP-LV-----SFLASFLLGWVVTTGASTCSYPLDTVRR 54 F pSVvGIvvYRglYFGm Dsl llgwvVTtgAstcSYPlDTVRR usage_00202.pdb 61 RMMM- 64 usage_00999.pdb 49 RMMMT 53 usage_01000.pdb 50 RMMMT 54 usage_01001.pdb 50 RMMMT 54 usage_01002.pdb 47 RMMMT 51 usage_01003.pdb 46 RMMMT 50 usage_01004.pdb 53 RMMMT 57 usage_01005.pdb 55 RMMMT 59 RMMM #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################