################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:58 2021 # Report_file: c_0875_91.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00196.pdb # 2: usage_00198.pdb # 3: usage_00200.pdb # 4: usage_00202.pdb # 5: usage_00777.pdb # 6: usage_00871.pdb # # Length: 170 # Identity: 18/170 ( 10.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 74/170 ( 43.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 80/170 ( 47.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00196.pdb 1 TPTVIAVHYLDQTEQWEKFGLEKRQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWL 60 usage_00198.pdb 1 -------------------GLEKRQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWL 41 usage_00200.pdb 1 -------------------GLEKRQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWL 41 usage_00202.pdb 1 -------------------GLEKRQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWL 41 usage_00777.pdb 1 -------------------PLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWL 41 usage_00871.pdb 1 TPTVIAVHYLDSTDQWEKFGLEKRQESLELIRKGYTQQLAFRQKSSAYAAFQYRPPSTWL 60 gLekrQe lelikkGytqqlaf q saYaaf rppSTWL usage_00196.pdb 61 TAYVSRVFSLAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPV-IHQEMIG------ 113 usage_00198.pdb 42 TAYVSRVFSLAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPV-IHQEMIGGF-RNT 99 usage_00200.pdb 42 TAYVSRVFSLAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPV-IHQEMIGGF-RNT 99 usage_00202.pdb 42 TAYVSRVFSLAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPV-IHQEMIGGF-RNT 99 usage_00777.pdb 42 TAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEAR 101 usage_00871.pdb 61 TAYVVKVFALAANLIAIDSKDLCETVKWLILEKQKPDGIFQEDGPV-----IHQEM-IG- 113 TAyv rVf laanliaids lC vkWLilekQkpdG FqEdgpv usage_00196.pdb -------------------------------------------------- usage_00198.pdb 100 K-----E-ADVSLTAFVLIALQEARDICEGQVN-SLPGSINKAGEYLEAS 142 usage_00200.pdb 100 K-----E-ADVSLTAFVLIALQEARDICEGQVN-SLPGSINKAGEYLEAS 142 usage_00202.pdb 100 K-----E-ADVSLTAFVLIALQEARDICEGQVN-SLPGSINKAGEYLEAS 142 usage_00777.pdb 102 ------E-NSLYLTAFTVIGIRKAFDICP---LVKIDTALIKADNFLLEN 141 usage_00871.pdb 114 -GFRDTREKDVSLTAFVLIALHEAK------------------------- 137 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################