################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:28:37 2021 # Report_file: c_0003_1.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00007.pdb # 7: usage_00012.pdb # 8: usage_00013.pdb # 9: usage_00014.pdb # 10: usage_00015.pdb # 11: usage_00016.pdb # # Length: 446 # Identity: 142/446 ( 31.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 226/446 ( 50.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/446 ( 7.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00002.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00003.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00004.pdb 1 -----NPQFKKLQTWY-HEHRSDLNLRRLFEGDKDRFNHFSLNLNTNH---GRILLDYSK 51 usage_00005.pdb 1 ------PAWKRLQSLY-EKYGN-DSILSHFEKDHQRFQRYSIEIDLHS-DDNFLFLDYSK 51 usage_00007.pdb 1 TTLTSCASWTQLQKLY-EQYGD-EPIKKHFETDSERGQRYSVKVSLGSKDENFLFLDYSK 58 usage_00012.pdb 1 --------DDSKKYLKE-Q--N-INLKNEFDKDDKRVEKFSLKHQ-------NIYFDYSK 41 usage_00013.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00014.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00015.pdb 1 ------PQFQKLLEWH-RANSANLKLRELFEADPERFNNFSLNLNTNH---GHILVDYSK 50 usage_00016.pdb 1 ------PQFQKLQQWY-REHRSELNLRRLFDANKDRFNHFSLTLNTNH---GHILVDYSK 50 l F d R S DYSK usage_00001.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00002.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00003.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00004.pdb 52 NLVTEAVMQMLVDLAKSRGVEAARERMFNGEKINFTEDRAVLHVALRNRSNTPILVDGKD 111 usage_00005.pdb 52 SHINDEIKDALVALAEERGVRAFAKAMFDGQRVNSTENRAVLHVALRNRSNRPIIVDGKD 111 usage_00007.pdb 59 SHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKD 118 usage_00012.pdb 42 NLINDYILKSLLESAEKSSLKDKIKQMFNGAKINSTEHRAVLHTALRDLSSTPLIVDGQD 101 usage_00013.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00014.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00015.pdb 51 NLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAVLHVALRNRSNTPIKVDGKD 110 usage_00016.pdb 51 NLVTEDVMRMLVDLAKSRGVEAARERMFNGEKINYTEGRAVLHVALRNRSNTPILVDGKD 110 L lA rg mF G N TE RaVLH ALRnrSn Pi VDGkD usage_00001.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00002.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00003.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00004.pdb 112 VMPEVNRVLEKMKSFCKRVRSGEWKGYSGKSITDVINIGIGGSDLGPLMVTEALKPYSAE 171 usage_00005.pdb 112 VMSDVNNVLAQMKDFTERVRSGEWKGQTGKSIYNIVNIGIGGSDLGPVMVTEALKPFSKR 171 usage_00007.pdb 119 VMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQR 178 usage_00012.pdb 102 IRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYHCT 161 usage_00013.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00014.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00015.pdb 111 VMPEVNRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKG 170 usage_00016.pdb 111 VMPEVNKVLDKMKSFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSG 170 vm Vn vl mk f VrsG WkG GK I NIGIGGSDLGP MvteALkP s usage_00001.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00002.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00003.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00004.pdb 172 GPRVWFVSNIDGTHIAKTLATLNPESSLFIIASKTFTTQETITNAETAKEWFLQSA---- 227 usage_00005.pdb 172 DLHCFFVSNVDGTHMAEVLKQVNLEETIFIIASKTFTTQETLTNAMSARNALMSYLKENG 231 usage_00007.pdb 179 DLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRG 238 usage_00012.pdb 162 DLKVHFVSNVDADSLLQALHVVDPETTLLIIASKSFSTEETLLNSISAREWLLDHY---- 217 usage_00013.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00014.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00015.pdb 171 GPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEWFLEAA---- 226 usage_00016.pdb 171 GPRVWYVSNIDGTHIAKTLAQLNPESSLFIIASKTFTTQETITNAETAKEWFLQAA---- 226 fVSN Dgth a L E lfIiASKtFtTqET tNa A l usage_00001.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00002.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00003.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00004.pdb 228 -KDPSAVAKHFVALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDN 286 usage_00005.pdb 232 ISTDGAVAKHFVALSTNTEKVREFGIDTVNMFAFWDWVGGRYSVWSAIGLSVMLSIGYDN 291 usage_00007.pdb 239 IDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYEN 298 usage_00012.pdb 218 -EDEKAVANHFVAISSKLDKVKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDN 276 usage_00013.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00014.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00015.pdb 227 -KDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDH 285 usage_00016.pdb 227 -KDPSAVAKHFVALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDN 285 aVAkHFVAlStn KVkEFGID nmf fWDWVGGRYS WSaIGlsi G d usage_00001.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00002.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00003.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00004.pdb 287 FEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINFFGCETHAMLPYDQYLHRFAAYF 346 usage_00005.pdb 292 FVEFLTGAHVMDNHFASTPTEQNLPMMLALVGIWYNNFFGSETQAVLPYDQYLWRLPAYL 351 usage_00007.pdb 299 FVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYL 358 usage_00012.pdb 277 FEKLLAGAYSVDKHFKETEFSKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYL 336 usage_00013.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00014.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00015.pdb 286 FEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYF 345 usage_00016.pdb 286 FEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINCFGCETHAMLPYDQYLHRFAAYF 345 F lL GAh D HF tp e N P lAL g wY n g t A LPYDqy r aY usage_00001.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00002.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00003.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00004.pdb 347 QQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 406 usage_00005.pdb 352 QQLDMESNGKGVTKKSGAVAVQTGPIVFGEAGTNGQHAFYQLIHQGTKIIPCDFIGCVQT 411 usage_00007.pdb 359 QQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQS 418 usage_00012.pdb 337 QQADMESNGKSVNIAGETVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATS 396 usage_00013.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00014.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00015.pdb 346 QQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 usage_00016.pdb 346 QQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQT 405 QQ DMESNGK t g V qTGpi Ge GTNGQHAFyQLiHQGt IPcDF q usage_00001.pdb 406 QHPIRKGLHHKILLANFLAQTEALMK 431 usage_00002.pdb 406 QHPIRKGLHHKILLANFLA------- 424 usage_00003.pdb 406 QHPIRKGLHHKILLANFLA------- 424 usage_00004.pdb 407 QHPIRKGLHHKILLANFLAQTEALM- 431 usage_00005.pdb 412 QNRVGDHHRTLMSNFFAQTEALM--- 434 usage_00007.pdb 419 QNKIGDHHKIFMSNFFAQTEALM--- 441 usage_00012.pdb 397 HHNYDNHQQALLANCFAQSQALM--- 419 usage_00013.pdb 406 QHPIRKGLHHKILLANFLA------- 424 usage_00014.pdb 406 QHPIRKGLHHKILLANFLA------- 424 usage_00015.pdb 406 QHPIRKGLHHKILLANFLA------- 424 usage_00016.pdb 406 QHPIRKGLHHKILLANFLAQTEALMR 431 q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # 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