################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:04:42 2021 # Report_file: c_0881_7.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00063.pdb # 2: usage_00224.pdb # 3: usage_00225.pdb # 4: usage_00277.pdb # 5: usage_00278.pdb # 6: usage_00285.pdb # 7: usage_00286.pdb # 8: usage_00299.pdb # 9: usage_00317.pdb # # Length: 122 # Identity: 101/122 ( 82.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 101/122 ( 82.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/122 ( 17.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00063.pdb 1 STSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 60 usage_00224.pdb 1 STSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 60 usage_00225.pdb 1 -TSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 59 usage_00277.pdb 1 STSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 60 usage_00278.pdb 1 --SLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 58 usage_00285.pdb 1 --------------AYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 46 usage_00286.pdb 1 -TSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 59 usage_00299.pdb 1 STSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 60 usage_00317.pdb 1 STSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 60 AYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI usage_00063.pdb 61 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQR 120 usage_00224.pdb 61 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS----- 115 usage_00225.pdb 60 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS----- 114 usage_00277.pdb 61 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQR 120 usage_00278.pdb 59 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS----- 113 usage_00285.pdb 47 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQR 106 usage_00286.pdb 60 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS----- 114 usage_00299.pdb 61 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS----- 115 usage_00317.pdb 61 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQR 120 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNS usage_00063.pdb 121 L- 121 usage_00224.pdb -- usage_00225.pdb -- usage_00277.pdb 121 L- 121 usage_00278.pdb -- usage_00285.pdb 107 LK 108 usage_00286.pdb -- usage_00299.pdb -- usage_00317.pdb 121 L- 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################