################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:26:00 2021 # Report_file: c_1021_17.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00116.pdb # 4: usage_00266.pdb # 5: usage_00267.pdb # 6: usage_00273.pdb # 7: usage_00465.pdb # 8: usage_00466.pdb # 9: usage_00663.pdb # 10: usage_00713.pdb # # Length: 81 # Identity: 34/ 81 ( 42.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 57/ 81 ( 70.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 81 ( 21.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 RIWVYCGNGTPSDLGG-D-NIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 58 usage_00080.pdb 1 RIWVYCGNGTPSDLGG-D-NIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 58 usage_00116.pdb 1 RLWVYCGNGTPNELGG-A-NIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHS 58 usage_00266.pdb 1 RIWVYCGNGTPSDLGG-D-NIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 58 usage_00267.pdb 1 RIWVYCGNGTPSDLGG-D-NIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 58 usage_00273.pdb 1 RIWVYCG----------IPAKFL---EGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 47 usage_00465.pdb 1 RIWVYGN-GT------NIPAKFL---EGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 50 usage_00466.pdb 1 RIWVYGGNGTP-----NIPAKFL---EGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 52 usage_00663.pdb 1 RIWVYCGNGTPSDLGG-D-NIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 58 usage_00713.pdb 1 RIWVYGN-GTPSD---NIPAKFL---EGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHS 53 RiWVY EgltlrtNqtFrDtYaAdGGrNgVFNFPPNGTHS usage_00079.pdb 59 WPYWNEQLVAMKADIQHVLNG 79 usage_00080.pdb 59 WPYWNEQLVAMKADIQHVLNG 79 usage_00116.pdb 59 WEYWGAQLNAMKGDLQSSLG- 78 usage_00266.pdb 59 WPYWNEQLVAMKADIQHVLNG 79 usage_00267.pdb 59 WPYWNEQLVAMKADIQHVLNG 79 usage_00273.pdb 48 WPYWNEQLVAMKADIQHVLNG 68 usage_00465.pdb 51 WPYWNEQLVAMKADIQHVLNG 71 usage_00466.pdb 53 WPYWNEQLVAMKADIQHVLNG 73 usage_00663.pdb 59 WPYWNEQLVAMKADIQHV--- 76 usage_00713.pdb 54 WPYWNEQLVAMKADIQHVLNG 74 WpYWneQLvAMKaDiQhv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################