################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:42:37 2021 # Report_file: c_0078_3.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00031.pdb # 6: usage_00036.pdb # 7: usage_00071.pdb # 8: usage_00072.pdb # 9: usage_00073.pdb # 10: usage_00074.pdb # 11: usage_00081.pdb # 12: usage_00083.pdb # # Length: 187 # Identity: 63/187 ( 33.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 151/187 ( 80.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/187 ( 13.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TFLHIPMTKARLT---NPKFQIAAQNAI-TRSG-AFTGEVSLQILKDYGISWVVLGHSER 55 usage_00005.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00006.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00007.pdb 1 ----LRSVQTLVDGDK-LRLTYGAQDLSPHD-SGAYTGDVSGAFLAKLGCSYVVVGHSER 54 usage_00031.pdb 1 ----IPMTKARLT---NPKFQIAAQNAG-NA-D-------ALASLKDYGISWVVLGHSER 44 usage_00036.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00071.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00072.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00073.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00074.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00081.pdb 1 ----IPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 51 usage_00083.pdb 1 TFLHIPMTKARLT---NPKFQIAAQNAI-TR-SGAFTGEVSLQILKDYGISWVVLGHSER 55 ipmtkarlt pkfqiaAQna sl LkdyGiSwVVlGHSER usage_00001.pdb 56 RLYYGETNEIVAEKVAQA-AAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 114 usage_00005.pdb 52 RLYYGDTNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00006.pdb 52 RLYYGDTNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00007.pdb 55 RTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQ 114 usage_00031.pdb 45 RLYYGETNEIVAEKVAQA-AAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 103 usage_00036.pdb 52 RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00071.pdb 52 RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00072.pdb 52 RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00073.pdb 52 RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00074.pdb 52 RAYYGETNEIVADKVAAAVASGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00081.pdb 52 RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 111 usage_00083.pdb 56 RLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 115 R Yyg tneiVA KvA A a GfhvIVCvGEtneeREAGrtaAvvltQLaavaqkLskEa usage_00001.pdb 115 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 174 usage_00005.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00006.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00007.pdb 115 IGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKN 174 usage_00031.pdb 104 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 163 usage_00036.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00071.pdb 112 WSRVVIAYEPVWA------ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 165 usage_00072.pdb 112 WSRVVIAYEPVWA------ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 165 usage_00073.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00074.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00081.pdb 112 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 171 usage_00083.pdb 116 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKN 175 wsrVVIAYEPVWA AtpqqAQEVhellRrwvrSklgtdIAaqlRiLYGGSVtAKN usage_00001.pdb 175 ARTLYQ- 180 usage_00005.pdb 172 ARTLYQ- 177 usage_00006.pdb 172 ARTLYQ- 177 usage_00007.pdb 175 VGDIVAQ 181 usage_00031.pdb 164 ARTLYQ- 169 usage_00036.pdb 172 ARTLYQ- 177 usage_00071.pdb 166 ARTLYQ- 171 usage_00072.pdb 166 ARTLYQ- 171 usage_00073.pdb 172 ARTLYQ- 177 usage_00074.pdb 172 ARTLYQ- 177 usage_00081.pdb 172 ARTLYQ- 177 usage_00083.pdb 176 ARTLYQ- 181 artlyq #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################