################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:58:00 2021 # Report_file: c_0888_31.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00066.pdb # 2: usage_00082.pdb # 3: usage_00321.pdb # # Length: 127 # Identity: 94/127 ( 74.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 95/127 ( 74.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/127 ( 25.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00066.pdb 1 QEESQAAGMIHSTAGLYNQFIKGLDSFS-----ALPIEAVILSLQDLIGYFEPPSEELQH 55 usage_00082.pdb 1 --ESQAARMIHSTAGLYNQFIKGLDSFS----PALPIEAVILSLQDLIGYFEPPS-E--- 50 usage_00321.pdb 1 QEESQAARMIHSTAGLYNQFIKGLDSFSGKPR--LPIEAVILSLQDLIGYFEPP------ 52 ESQAArMIHSTAGLYNQFIKGLDSFS LPIEAVILSLQDLIGYFEPP usage_00066.pdb 56 EEKQSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYTT-----AAHFAAESWKEIVNLLY 110 usage_00082.pdb 51 ---QSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYT--------------WKEIVNLLY 93 usage_00321.pdb 53 ---QSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYTTYAGEE----AAESWKEIVNLLY 105 QSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYT WKEIVNLLY usage_00066.pdb 111 ELLASLI 117 usage_00082.pdb 94 ELLASLI 100 usage_00321.pdb 106 ELLASL- 111 ELLASL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################