################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:51:31 2021 # Report_file: c_0794_38.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00073.pdb # 2: usage_00074.pdb # 3: usage_00077.pdb # 4: usage_00078.pdb # 5: usage_00089.pdb # 6: usage_00091.pdb # 7: usage_00313.pdb # 8: usage_00314.pdb # 9: usage_00398.pdb # 10: usage_00454.pdb # 11: usage_00460.pdb # 12: usage_00461.pdb # # Length: 64 # Identity: 23/ 64 ( 35.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 64 ( 42.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 64 ( 18.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00073.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLH 58 usage_00074.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLH 58 usage_00077.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL- 57 usage_00078.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLH 58 usage_00089.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL- 57 usage_00091.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL- 57 usage_00313.pdb 1 PAVFVEAQP-D-WYKYP--KAGGEVKGIYSFGESAPAEDLFKRFGFTVENISNIVAKYV- 55 usage_00314.pdb 1 PAVFVEAQP-D-WYKYP--KAGGEVKGIYSFGESAPAEDLFKRFGFTVENISNIVAKYV- 55 usage_00398.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLH 58 usage_00454.pdb 1 ARIAIEAAHADYWYKY-VGL-DGRIIGMTSFGESAPAPALFEHFGFTLDNVLAVAEEL-- 56 usage_00460.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL- 57 usage_00461.pdb 1 ARVAVEAGIADYWYKY-VGL-NGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLH 58 v vEA D WYKY G G FGESAPAe LF FGFTv N usage_00073.pdb 59 HHH- 61 usage_00074.pdb ---- usage_00077.pdb ---- usage_00078.pdb 59 HHHH 62 usage_00089.pdb ---- usage_00091.pdb ---- usage_00313.pdb ---- usage_00314.pdb ---- usage_00398.pdb 59 HHH- 61 usage_00454.pdb ---- usage_00460.pdb ---- usage_00461.pdb 59 HHH- 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################