################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 22:57:58 2021 # Report_file: c_0875_53.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00821.pdb # 2: usage_00822.pdb # 3: usage_00823.pdb # # Length: 164 # Identity: 107/164 ( 65.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 110/164 ( 67.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 54/164 ( 32.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00821.pdb 1 --DENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQK 58 usage_00822.pdb 1 FYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQK 60 usage_00823.pdb 1 ---------------------NSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQK 39 NSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQK usage_00821.pdb 59 NTICSAVTLS---CKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAK-VADGSVN 114 usage_00822.pdb 61 NTICSAVTM-LSCMKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAKMVADGSVN 119 usage_00823.pdb 40 NTICSAVTM-LSCMKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAKMVADGSVN 98 NTICSAVTm mKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAK VADGSVN usage_00821.pdb 115 TQKWSYNAGFI-RSWLKYQA------------------------ 133 usage_00822.pdb 120 TQKWSYNAGFMIRSWLK---MYQA-------------------- 140 usage_00823.pdb 99 TQKWSYNAGFMIRSWLK---MYQATKDEKYLSQAKATLASSEAK 139 TQKWSYNAGFm RSWLK #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################