################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:13:02 2021 # Report_file: c_1060_8.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00003.pdb # 2: usage_00018.pdb # 3: usage_00020.pdb # 4: usage_00030.pdb # 5: usage_00034.pdb # 6: usage_00043.pdb # 7: usage_00046.pdb # 8: usage_00072.pdb # 9: usage_00073.pdb # 10: usage_00082.pdb # 11: usage_00083.pdb # 12: usage_00086.pdb # 13: usage_00126.pdb # # Length: 40 # Identity: 9/ 40 ( 22.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 40 ( 30.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 40 ( 35.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00003.pdb 1 TPSQTSVYFCASGGG-----G-TLYFGAGTRLSVL----- 29 usage_00018.pdb 1 -PSQTSVYFCASGQG-NF--D-IQYFGAGTRLSVLE---- 31 usage_00020.pdb 1 -PSQTSVYFCASGQG-NF--D-IQYFGAGTRLSVLE---- 31 usage_00030.pdb 1 SPSQTSLYFCASSDA-----PGQLYFGEGSKLTVLE---- 31 usage_00034.pdb 1 SLSQTAVYFCASSDW-VS--Y-EQYFGPGTRLTVLE---- 32 usage_00043.pdb 1 EPRDSAVYFCASSLWEKLAKN-IQYFGAGTRLSVLE---- 35 usage_00046.pdb 1 -WSDAAEYFCAVGETGA---N-NLFFGTGTRLTVIPYIQN 35 usage_00072.pdb 1 -PSQTSVYFCASGDASG-A-E-TLYFGPGTRLTVL----- 31 usage_00073.pdb 1 SLSQTAVYFCASSDW-VS--Y-EQYFGPGTRLTVLE---- 32 usage_00082.pdb 1 TPSQTSVYFCASGDY-----A-EQFFGPGTRLTVL----- 29 usage_00083.pdb 1 -PSQTSVYFCASGD--------EQFFGPGTRLTVLE---- 27 usage_00086.pdb 1 -VSDSAVYFCALSDP-----VNDMRFGAGTRLTVKP---- 30 usage_00126.pdb 1 -PSQSSVYFCASGVG-----G-TLYFGAGTRLSVL----- 28 s YFCA FG GtrL V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################