################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:28:34 2021 # Report_file: c_1376_73.html ################################################################################################ #==================================== # Aligned_structures: 32 # 1: usage_00090.pdb # 2: usage_00162.pdb # 3: usage_00172.pdb # 4: usage_00233.pdb # 5: usage_00234.pdb # 6: usage_00235.pdb # 7: usage_00236.pdb # 8: usage_00378.pdb # 9: usage_00388.pdb # 10: usage_00390.pdb # 11: usage_00399.pdb # 12: usage_00449.pdb # 13: usage_00486.pdb # 14: usage_00487.pdb # 15: usage_00489.pdb # 16: usage_00578.pdb # 17: usage_00602.pdb # 18: usage_00603.pdb # 19: usage_00604.pdb # 20: usage_00606.pdb # 21: usage_00607.pdb # 22: usage_00695.pdb # 23: usage_00776.pdb # 24: usage_00777.pdb # 25: usage_00796.pdb # 26: usage_00797.pdb # 27: usage_00798.pdb # 28: usage_00818.pdb # 29: usage_00980.pdb # 30: usage_01190.pdb # 31: usage_01214.pdb # 32: usage_01346.pdb # # Length: 46 # Identity: 3/ 46 ( 6.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 46 ( 28.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 14/ 46 ( 30.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00090.pdb 1 DTVVNFLSFSMEFLAKSPEHRQELIQRP-E--RIPAACEELLRR-- 41 usage_00162.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00172.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00233.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIQRP-E--RIPAACEELLRR-- 39 usage_00234.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIQRP-E--RIPAACEELLRR-- 39 usage_00235.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIQRP-E--RIPAACEELLRR-- 39 usage_00236.pdb 1 DTVVNFLSFSMEFLAKSPEHRQELIQRP-E--RIPAACEELLRR-- 41 usage_00378.pdb 1 -TVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 40 usage_00388.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAASEELLRR-- 39 usage_00390.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00399.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00449.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00486.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00487.pdb 1 -TVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 40 usage_00489.pdb 1 ---PPEFLAFLQILSQSREMADEFTDNFNYPERQWDRF-------- 35 usage_00578.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00602.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00603.pdb 1 -TVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 40 usage_00604.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00606.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00607.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00695.pdb 1 DTVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRRFS 43 usage_00776.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00777.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00796.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00797.pdb 1 -TVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 40 usage_00798.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_00818.pdb 1 -TVVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 40 usage_00980.pdb 1 DTVVNFLGFMMIYLSRHPETVAEMRREP-L--KLQRGVEELFRRF- 42 usage_01190.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_01214.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 usage_01346.pdb 1 --VVNFLSFSMEFLAKSPEHRQELIERP-E--RIPAACEELLRR-- 39 vnfl f m L spE E p r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################