################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:00 2021 # Report_file: c_0836_53.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00098.pdb # 2: usage_00099.pdb # 3: usage_00250.pdb # 4: usage_00307.pdb # 5: usage_00342.pdb # # Length: 62 # Identity: 3/ 62 ( 4.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 7/ 62 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 62 ( 27.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00098.pdb 1 NHQVLFG-R--VAAVVHHGGAGTTTAVTRAGAPQVVVPQ-K---ADQPYYAGRVADLG-- 51 usage_00099.pdb 1 NHQVLFG-R--VAAVVHHGGAGTTTAVTRAGAPQVVVPQ-K---ADQPYYAGRVADLG-- 51 usage_00250.pdb 1 KMQSIIRDY--SDLVISHAGTGSILDSLRLNKPLIVCVNDSLMD---NHQQQIADKFVEL 55 usage_00307.pdb 1 -LGALLE-T--CDAIIHHGGSGTLLTALAAGVPQCVIPHG--------TNRDVLTGLG-- 46 usage_00342.pdb 1 -QVEVLA-HKAIGGFVSHCGWNSILESMWFGVPILTWPI-Y---AEQQLNAFRLVKEW-- 52 H G g g P v p usage_00098.pdb -- usage_00099.pdb -- usage_00250.pdb 56 G- 56 usage_00307.pdb -- usage_00342.pdb 53 -G 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################