################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:03:20 2021 # Report_file: c_1484_131.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00055.pdb # 2: usage_02475.pdb # 3: usage_03065.pdb # 4: usage_03066.pdb # 5: usage_04433.pdb # 6: usage_04437.pdb # # Length: 71 # Identity: 1/ 71 ( 1.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 1/ 71 ( 1.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 56/ 71 ( 78.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 DEAHQPHFSDLFGQIIN--AGQG---E-GRYSELLAINLLEQLLLR-------------- 40 usage_02475.pdb 1 ------HFSDLFGQIIN--AGQG---E-GRYSELLAINLLEQLLLR-------------- 34 usage_03065.pdb 1 DEAHQPHFSDLFGQIIN--AGQG---E-GRYSELLAINLLEQLLLR-------------- 40 usage_03066.pdb 1 -----PHFSDLFGQIIN--AGQG---E-GRYSELLAINLLEQLLLR-------------- 35 usage_04433.pdb 1 ---------------------------DSQVGTAVKAFLQSTIGAGQSGLGDNGYIPIPD 33 usage_04437.pdb 1 -D----MFFKLMSA---DGQYDRDVEI-PEETRVYLDRLKDRV----------------- 34 L usage_00055.pdb 41 ----RMEAI-- 45 usage_02475.pdb 35 ----RMEAIN- 40 usage_03065.pdb 41 ----RMEAIN- 46 usage_03066.pdb 36 ----RMEAIN- 41 usage_04433.pdb 34 EFKSRLSTAVN 44 usage_04437.pdb ----------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################