################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:53:59 2021 # Report_file: c_1414_19.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00055.pdb # 2: usage_00056.pdb # 3: usage_00057.pdb # 4: usage_00058.pdb # 5: usage_00059.pdb # 6: usage_00060.pdb # 7: usage_00061.pdb # 8: usage_00062.pdb # 9: usage_00118.pdb # 10: usage_00292.pdb # 11: usage_00293.pdb # 12: usage_00306.pdb # # Length: 54 # Identity: 8/ 54 ( 14.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/ 54 ( 61.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 54 ( 20.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00055.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNARAK--- 47 usage_00056.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNARAKI-- 48 usage_00057.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNARAK--- 47 usage_00058.pdb 1 -SEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNARAK--- 46 usage_00059.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNERAK--- 47 usage_00060.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNERAKI-- 48 usage_00061.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNERAKI-- 48 usage_00062.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNERAKIKK 50 usage_00118.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNKRAKI-- 48 usage_00292.pdb 1 SSEQLARLKREFNENR-YL---TERRRQQLSSELGLNEAQIKIWFQNKRAKIKK 50 usage_00293.pdb 1 TAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNN------ 48 usage_00306.pdb 1 -AEQLQRLKAEFQTNR-YL---TEQRRQSLAQELGLNESQIKIWFQNKRAK--- 46 EQl rlk ef nr yl te rrqql ElGlne qiKIWfqN #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################