################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:38:59 2021 # Report_file: c_0110_12.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00029.pdb # 2: usage_00069.pdb # 3: usage_00133.pdb # 4: usage_00174.pdb # 5: usage_00175.pdb # 6: usage_00176.pdb # 7: usage_00183.pdb # # Length: 231 # Identity: 161/231 ( 69.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 161/231 ( 69.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 70/231 ( 30.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00029.pdb 1 ----IPILEVLNICVFPREVTNFLRKSVKRMKESRLED----VDFLQLMIDSQ----ALS 48 usage_00069.pdb 1 ----IPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQ----FLQLMIDSQSHK-ALS 51 usage_00133.pdb 1 ---LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT-HRVDFLQLMIDSQ----ALS 52 usage_00174.pdb 1 ----IPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT--RVDFLQLMIDSQ---NALS 51 usage_00175.pdb 1 ----IPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT-HRVDFLQLMIDSQ---NALS 52 usage_00176.pdb 1 ----IPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT-HRVDFLQLMIDSQ---NALS 52 usage_00183.pdb 1 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRL------VDFLQLMIDSQ---NALS 51 IPILEVLNICVFPREVTNFLRKSVKRMKESRL FLQLMIDSQ ALS usage_00029.pdb 49 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 108 usage_00069.pdb 52 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 111 usage_00133.pdb 53 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 112 usage_00174.pdb 52 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 111 usage_00175.pdb 53 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 112 usage_00176.pdb 53 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 112 usage_00183.pdb 52 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 111 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL usage_00029.pdb 109 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW--- 165 usage_00069.pdb 112 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 171 usage_00133.pdb 113 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 172 usage_00174.pdb 112 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 171 usage_00175.pdb 113 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW--- 169 usage_00176.pdb 113 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW--- 169 usage_00183.pdb 112 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW--- 168 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW usage_00029.pdb --------------------------------------------------- usage_00069.pdb 172 EKFLPERFSKKNKDNI----------------------------------- 187 usage_00133.pdb 173 EKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQN 223 usage_00174.pdb 172 EKFLPERFSKKNKDNID---------------------------------- 188 usage_00175.pdb --------------------------------------------------- usage_00176.pdb --------------------------------------------------- usage_00183.pdb --------------------------------------------------- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################