################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:49:58 2021 # Report_file: c_0467_14.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00053.pdb # 2: usage_00054.pdb # 3: usage_00055.pdb # 4: usage_00115.pdb # 5: usage_00116.pdb # 6: usage_00127.pdb # 7: usage_00128.pdb # 8: usage_00157.pdb # 9: usage_00599.pdb # 10: usage_00608.pdb # 11: usage_00625.pdb # 12: usage_00662.pdb # # Length: 94 # Identity: 29/ 94 ( 30.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 69/ 94 ( 73.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 94 ( 25.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00053.pdb 1 -ALDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00054.pdb 1 -ALDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00055.pdb 1 LALDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 50 usage_00115.pdb 1 -ALDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00116.pdb 1 -ALDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00127.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00128.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00157.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00599.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00608.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00625.pdb 1 -QLDTA----------MWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAH 49 usage_00662.pdb 1 ------GKAMTGTDGSTWNTNSATESMGSWVA-KFADKIDLVISNNDGMAMGCLQAS--- 50 mWdTaqAkdkMdaWls pnAnKIevVIaNNDaMAMGaveAl usage_00053.pdb 50 N--KSSIPVFGVDALPEALALVKSGAMAGTVLND 81 usage_00054.pdb 50 N--KSSIPVFGVDALPEALALVKSGAMAGTVLND 81 usage_00055.pdb 51 N--KSSIPVFGVDALPEALALVKSGAMAGTVLND 82 usage_00115.pdb 50 N--KSSIPVFGVDALPEALALVKSGAMAGTVLND 81 usage_00116.pdb 50 N--KSSIPVFGVDALPEALALVKSGAMAGTVLN- 80 usage_00127.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLND 81 usage_00128.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLN- 80 usage_00157.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLND 81 usage_00599.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLN- 80 usage_00608.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLND 81 usage_00625.pdb 50 N--KSSIPVFGVDALPEALALVKSGALAGTVLND 81 usage_00662.pdb 51 -NYPRGLPIFGYDANADAVESVGKGELTGTVSQ- 82 kssiPvFGvDAlpeAlalVksGa aGTVln #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################