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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:55:14 2021
# Report_file: c_0413_14.html
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#====================================
# Aligned_structures: 8
#   1: usage_00015.pdb
#   2: usage_00073.pdb
#   3: usage_00082.pdb
#   4: usage_00083.pdb
#   5: usage_00113.pdb
#   6: usage_00139.pdb
#   7: usage_00162.pdb
#   8: usage_00184.pdb
#
# Length:         72
# Identity:        9/ 72 ( 12.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     14/ 72 ( 19.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/ 72 ( 25.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00015.pdb         1  ENIISVDHLTYQYQAP----------ALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDG   50
usage_00073.pdb         1  RIEVVNVSHIF-----HRGTP-LEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAG   54
usage_00082.pdb         1  PIKVENVSFIY-----NEGTP-YATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNG   54
usage_00083.pdb         1  PIKVENVSFIY-----NEGTP-YATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNG   54
usage_00113.pdb         1  RIEVVNVSHIF-----HRGTP-LEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAG   54
usage_00139.pdb         1  AIAFEHVTYTY-----QAGTP-MAHTALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNA   54
usage_00162.pdb         1  -IKFENVSYVY-----SPGSPL-EAIGLDQLNFSLEEGKFIALVGHTGSGKSTLMQHFNA   53
usage_00184.pdb         1  ILKVEELNYNY-----S-----DGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNG   50
                                                     aL                G  GsGKSTL q    

usage_00015.pdb        51  LLPFTQGSVTV-   61
usage_00073.pdb        55  LIEPTSGDVL--   64
usage_00082.pdb        55  LLKPSKGKIYIN   66
usage_00083.pdb        55  LLKPSKGKIYIN   66
usage_00113.pdb        55  LIEPTSGDVLY-   65
usage_00139.pdb        55  LLKPTSGTIKID   66
usage_00162.pdb        54  LLKPTSGKIEI-   64
usage_00184.pdb        51  ILKPSSGRILFD   62
                           l  p  G     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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