################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:05:23 2021 # Report_file: c_1106_23.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00035.pdb # 4: usage_00054.pdb # 5: usage_00074.pdb # 6: usage_00076.pdb # 7: usage_00077.pdb # 8: usage_00079.pdb # 9: usage_00089.pdb # 10: usage_00095.pdb # 11: usage_00113.pdb # 12: usage_00116.pdb # 13: usage_00117.pdb # 14: usage_00118.pdb # 15: usage_00142.pdb # 16: usage_00147.pdb # 17: usage_00215.pdb # 18: usage_00230.pdb # # Length: 65 # Identity: 7/ 65 ( 10.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 65 ( 16.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 65 ( 23.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 TCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLAVDL--QNPDLVSLLLKCG- 56 usage_00005.pdb 1 TCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLAVDL--QNPDLVSLLLKCG- 56 usage_00035.pdb 1 TPLHFAAGYNRVSVVEYLLQ-HGADVHAKDK-GGLVPLHNACSY--GHYEVAELLVKHG- 55 usage_00054.pdb 1 -PLHLAAKEGHLRVVEFLVKHTASNVGHRNH-KGDTACDLARLY--GRNEVVSLMQA--- 53 usage_00074.pdb 1 TPLHLAAREGHLEIVEVLLK-AGADVNAQDK-FGKTPFDLAIDN--GNEDIAEVLQKAA- 55 usage_00076.pdb 1 TPLHLAAREGHLEIVEVLLK-AGADVNAQDK-FGKTPFDLAIDN--GNEDIAEVLQKAA- 55 usage_00077.pdb 1 TPLHLAAREGHLEIVEVLLK-AGADVNAQDK-FGKTPFDLAIRE--GHEDIAEVLQKAA- 55 usage_00079.pdb 1 TPLHLAAREGHLEIVEVLLK-AGADVNAQDK-FGKTPFDLAIRE--GHEDIAEVLQKAA- 55 usage_00089.pdb 1 TPLHSAAENGHLELVKLLLE-KGADINARDK-FGKTPFDLAIDN--GNEDIAEVLQKAAR 56 usage_00095.pdb 1 TPLHLAVITGQTSVVSFLLR-VGADPALLDR-HGDSAMHLALRAGAGAPELLRAL-L--- 54 usage_00113.pdb 1 TPLHSAAENGHLELVKLLLE-KGADINARDK-FGKTPFDLAIDN--GNEDIAEVLQKAAR 56 usage_00116.pdb 1 TPLHSAAENGHLELVKLLLE-KGADINARDK-FGKTPFDLAIDN--GNEDIAEVLQKAAR 56 usage_00117.pdb 1 TPLHSAAENGHLELVKLLLE-KGADINARDK-FGKTPFDLAIDN--GNEDIAEVLQKAAR 56 usage_00118.pdb 1 TPLHSAAENGHLELVKLLLE-KGADINARDK-FGKTPFDLAIDN--GNEDIAEVLQKAAR 56 usage_00142.pdb 1 TPLHLAAKWGYLEIVEVLLK-HGADVNAQDK-FGKTPFDLAIDN--GNEDIAEVLQKAA- 55 usage_00147.pdb 1 TPLHCAARSGHDQVVELLLE-RGAPLLARTK-NGLSPLH-AAQG--DHVECVKHLLQHK- 54 usage_00215.pdb 1 TPLHLAAHTGHLEIVDVLLA-NGADVNANNW-WGKTPFDLAIDN--GNEDIAEVLQKAA- 55 usage_00230.pdb 1 -PLHLAAKWGYLEIVEVLLK-HGADVNAQDK-FGKTPFDLADDN--GNDDVGTLLQVAAA 55 LH A g V L ga G A l usage_00004.pdb ----- usage_00005.pdb ----- usage_00035.pdb ----- usage_00054.pdb ----- usage_00074.pdb ----- usage_00076.pdb ----- usage_00077.pdb ----- usage_00079.pdb ----- usage_00089.pdb ----- usage_00095.pdb ----- usage_00113.pdb 57 S---- 57 usage_00116.pdb 57 S---- 57 usage_00117.pdb 57 S---- 57 usage_00118.pdb 57 SHH-- 59 usage_00142.pdb ----- usage_00147.pdb ----- usage_00215.pdb ----- usage_00230.pdb 56 ADQLG 60 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################