################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:06:12 2021 # Report_file: c_1311_33.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00005.pdb # 2: usage_00023.pdb # 3: usage_00040.pdb # 4: usage_00041.pdb # 5: usage_00102.pdb # 6: usage_00114.pdb # 7: usage_00115.pdb # 8: usage_00116.pdb # 9: usage_00132.pdb # 10: usage_00161.pdb # 11: usage_00162.pdb # 12: usage_00220.pdb # 13: usage_00221.pdb # 14: usage_00222.pdb # 15: usage_00223.pdb # 16: usage_00254.pdb # 17: usage_00255.pdb # 18: usage_00430.pdb # # Length: 68 # Identity: 21/ 68 ( 30.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 68 ( 58.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 68 ( 16.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 usage_00023.pdb 1 NATAIALKYNQDATKSERVAAARPGLPPEEQQCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00040.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00041.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00102.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 usage_00114.pdb 1 DPAAVALKYHRDAASSERVAAARPGLPPEEQHCENCQFMNPDS--AAADWKGCQLFPGKL 58 usage_00115.pdb 1 DPAAVALKYHRDAASSERVAAARPGLPPEEQHCENCQFMNPDS--AAADWKGCQLFPGKL 58 usage_00116.pdb 1 DPAAVALKYHRDAASSERVAAARPGLPPEEQHCENCQFMNPDS--AAADWKGCQLFPGKL 58 usage_00132.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 usage_00161.pdb 1 DPAAQALEYRHDASSVQH-PAY-----EEGQTCLNCLLYTD--AS-AQDWGPCSVFPGKL 51 usage_00162.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00220.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00221.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00222.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00223.pdb 1 DATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKL 60 usage_00254.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 usage_00255.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 usage_00430.pdb 1 DPTAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQANV--GEGDWKGCQLFPGKL 58 d A ALkY DA ser aAa pEeQ C NCqfm WkgCqlFPGKL usage_00005.pdb 59 INVNGWCA 66 usage_00023.pdb 61 INVNGWCA 68 usage_00040.pdb 61 INVNGWCA 68 usage_00041.pdb 61 INVNGWCA 68 usage_00102.pdb 59 INVNGWCA 66 usage_00114.pdb 59 INLSGWCA 66 usage_00115.pdb 59 INLSGWCA 66 usage_00116.pdb 59 INLSGWCA 66 usage_00132.pdb 59 INVNGWCA 66 usage_00161.pdb 52 VSANGWCT 59 usage_00162.pdb 61 INVNGWCA 68 usage_00220.pdb 61 INVNGWSA 68 usage_00221.pdb 61 INVNGWSA 68 usage_00222.pdb 61 INVNGWSA 68 usage_00223.pdb 61 INVNGWSA 68 usage_00254.pdb 59 INVNGWCA 66 usage_00255.pdb 59 INVNGWCA 66 usage_00430.pdb 59 INVNGWCA 66 in GW a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################