################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:29 2021 # Report_file: c_0777_114.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00481.pdb # 2: usage_00482.pdb # 3: usage_00483.pdb # 4: usage_00485.pdb # 5: usage_00486.pdb # 6: usage_00487.pdb # 7: usage_00595.pdb # 8: usage_00596.pdb # 9: usage_00597.pdb # 10: usage_00598.pdb # 11: usage_00599.pdb # 12: usage_00716.pdb # 13: usage_00717.pdb # 14: usage_00785.pdb # 15: usage_01248.pdb # 16: usage_01281.pdb # 17: usage_01409.pdb # # Length: 63 # Identity: 2/ 63 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 63 ( 15.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/ 63 ( 38.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00481.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00482.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00483.pdb 1 -ATLKVIGVGGGGNNAVNRIDN----------NVEFIAINT--DGQALNLSKA--ES-KI 44 usage_00485.pdb 1 -ATLKVIGVGGGGNNAVNRM--I----------VEFIAINT--DGQALNLSKA--ES-KI 42 usage_00486.pdb 1 -ATLKVIGVGGGGNNAVNRM--ID--------NVEFIAINT--DGQALNLSKA--ES-KI 44 usage_00487.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G-----NVEFIAINT--DGQALNLSKA--ES-KI 46 usage_00595.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00596.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00597.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00598.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00599.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_00716.pdb 1 KAKITVVGCGGAGNNTITRL--KME-G---IEGAKTVAINT--DAQQLIRTKA--DK-KI 49 usage_00717.pdb 1 -AKITVVGCGGAGNNTITRL--KME-G---IEGAKTVAINT--DAQQLIRTKA--DK-KI 48 usage_00785.pdb 1 ---AAIICPVG-GGGLLNGV--IMGLQEADWKDVPVIAVETHGSNAFQASVVAGELV-IM 53 usage_01248.pdb 1 --SIKVIGVGGGGNNAVNRM--IEN-E---VQGVEYIAVNT--DAQALNLSKA--EV-KM 47 usage_01281.pdb 1 -ATLKVIGVGGGGNNAVNRM--IDH-G---MNNVEFIAINT--DGQALNLSKA--ES-KI 48 usage_01409.pdb 1 --KIVFAPIGQGGGNIVDTL--LGI-C---G-DYNALFINT--SKKDLDSLKH--AKHTY 47 gg G n a nT l ka usage_00481.pdb 49 QI- 50 usage_00482.pdb 49 QI- 50 usage_00483.pdb 45 QI- 46 usage_00485.pdb 43 QI- 44 usage_00486.pdb 45 QI- 46 usage_00487.pdb 47 QI- 48 usage_00595.pdb 49 QIG 51 usage_00596.pdb 49 QI- 50 usage_00597.pdb 49 QIG 51 usage_00598.pdb 49 QI- 50 usage_00599.pdb 49 QIG 51 usage_00716.pdb 50 L-- 50 usage_00717.pdb 49 L-- 49 usage_00785.pdb 54 EK- 55 usage_01248.pdb 48 QI- 49 usage_01281.pdb 49 QI- 50 usage_01409.pdb 48 HI- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################