################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:17:57 2021 # Report_file: c_1115_28.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00744.pdb # 2: usage_01538.pdb # 3: usage_01539.pdb # 4: usage_01551.pdb # 5: usage_01606.pdb # # Length: 70 # Identity: 40/ 70 ( 57.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/ 70 ( 78.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 70 ( 1.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00744.pdb 1 AKDFAMKHGADETMAQQLVDIIHGCEKSAPPNDDKCMKTIDVAMCFKKEIHKLNWVPNMD 60 usage_01538.pdb 1 AMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMD 60 usage_01539.pdb 1 AMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMD 60 usage_01551.pdb 1 AMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMD 60 usage_01606.pdb 1 AREFAMKHGADDAMAKQLVDLIHGCEKSIPPNDDRCMEVLSIAMCFKKEIHNLKWAPNME 60 A eFA KHGADetMAqQL Di HGCEKS P NDDkC tl vA CFK EIHkLnWaP Md usage_00744.pdb 61 LVIGEVLAEV 70 usage_01538.pdb 61 VAVGEILAE- 69 usage_01539.pdb 61 VAVGEILAE- 69 usage_01551.pdb 61 VAVGEILAE- 69 usage_01606.pdb 61 VVVGEVLAE- 69 v vGE LAE #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################