################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:23:16 2021 # Report_file: c_0590_6.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00078.pdb # 2: usage_00100.pdb # 3: usage_00144.pdb # 4: usage_00149.pdb # 5: usage_00312.pdb # 6: usage_00333.pdb # # Length: 107 # Identity: 13/107 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 33/107 ( 30.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/107 ( 15.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00078.pdb 1 QAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLPQAMSISEVTEKLGL 60 usage_00100.pdb 1 QAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLPQAMSISEVTEKLGL 60 usage_00144.pdb 1 EFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKL 60 usage_00149.pdb 1 QGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 60 usage_00312.pdb 1 DAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVAMPPVEIAQALGL 60 usage_00333.pdb 1 NGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 60 fvVDs D R reEl ml r L faNK D p am e lgL usage_00078.pdb 61 Q-TI----------K-NRKWYCQTSCATNGDGLYEGLDWLADN---- 91 usage_00100.pdb 61 Q-TI----------K-NRKWYCQTSCATNGDGLYEGLDWLADN---- 91 usage_00144.pdb 61 T-SI----------K-DHQWHIQACCALTGEGLCQGLEWMMSRL--- 92 usage_00149.pdb 61 H-SL----------R-HRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 95 usage_00312.pdb 61 D-DI----------K-DRPWQIVPSNGLTGEGVDKGIDWLAERLS-- 93 usage_00333.pdb 61 YGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI--- 104 r w g G G W #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################