################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:35 2021 # Report_file: c_1052_68.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00194.pdb # 2: usage_00195.pdb # 3: usage_00196.pdb # 4: usage_00306.pdb # 5: usage_00307.pdb # 6: usage_00308.pdb # # Length: 60 # Identity: 36/ 60 ( 60.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 42/ 60 ( 70.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 60 ( 30.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00194.pdb 1 RWTKKPSQ-QEHVLSLCHL-WHNGPEIYKDFETKIRSVSAGRAL---------------- 42 usage_00195.pdb 1 RWTKKPSQ-QEHVLSLCHL-WHNGPEIYKDFETKIRSVSAGRAL---------------- 42 usage_00196.pdb 1 RWTKKPSQ-QEHVLSLCHL-WHNGPEIYKDFETKIRSVSAGRAL---------------- 42 usage_00306.pdb 1 RWTKKPSQMQEHVLSLCHLMWHNGRKVYEDFSSKIRSVSAGRALYIPPYDLLKHEWYEKF 60 usage_00307.pdb 1 RWTKKPSQMQEHVLSLCHLMWHNGPEIYKDFETKIRSVSAGRAL---------------- 44 usage_00308.pdb 1 RWTKKPSQMQEHVLSLCHLMWHNGPEIYKDFETKIRSVSAGRALYIPPYELLRHEWYEK- 59 RWTKKPSQ QEHVLSLCHL WHNGpeiYkDFetKIRSVSAGRAL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################