################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:10 2021 # Report_file: c_0792_14.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00012.pdb # 2: usage_00232.pdb # 3: usage_00250.pdb # 4: usage_00261.pdb # 5: usage_00278.pdb # 6: usage_00279.pdb # 7: usage_00280.pdb # 8: usage_00281.pdb # 9: usage_00283.pdb # 10: usage_00284.pdb # 11: usage_00285.pdb # # Length: 79 # Identity: 27/ 79 ( 34.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 79 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 79 ( 2.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 --TRVRLGRTVEGFGFGPTLTKETRIELENKISTALHNLSGEYEGTYYPLTGMSEEDRIK 58 usage_00232.pdb 1 --TRVRCGRSMQGYPFNPMLTESQYKEMEAKVSSTLSSLEGELKGTYYPLTGMSKEVQQK 58 usage_00250.pdb 1 -STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQ 59 usage_00261.pdb 1 --TRVRCGRSMQGYPFNPCLTESQYKEMEAKVSSTLSSLEGELKGTYYPLTGMSKEVQQK 58 usage_00278.pdb 1 --TRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 58 usage_00279.pdb 1 --TRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 58 usage_00280.pdb 1 --TRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 58 usage_00281.pdb 1 RSTRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 60 usage_00283.pdb 1 RSTRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 60 usage_00284.pdb 1 -STRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 59 usage_00285.pdb 1 RSTRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLTGDLAGKYYPLSGMDEKTRQQ 60 TR R Rs Gy P T E E Kv L sl g l G YYPL GM q usage_00012.pdb 59 LVNDHFLFRNDDNVLRDAG 77 usage_00232.pdb 59 LIDDHFLFKEGDRFLQAAN 77 usage_00250.pdb 60 LIDDHFLFKEGDRFLQTAN 78 usage_00261.pdb 59 LIDDHFLFKEGDRFLQAAN 77 usage_00278.pdb 59 LVDDHFLFKKGDRFLEAAG 77 usage_00279.pdb 59 LVDDHFLFKKGDRFLEAAG 77 usage_00280.pdb 59 LVDDHFLFKKGDRFLEAAG 77 usage_00281.pdb 61 LVDDHFLFKKGDRFLEAAG 79 usage_00283.pdb 61 LVDDHFLFKKGDRFLEAAG 79 usage_00284.pdb 60 LVDDHFLFKKGDRFLEAAG 78 usage_00285.pdb 61 LVDDHFLFKKGDRFLEAAG 79 L dDHFLFk gDrfL A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################