################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:05:47 2021 # Report_file: c_1116_28.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00016.pdb # 2: usage_00017.pdb # 3: usage_00018.pdb # 4: usage_00019.pdb # 5: usage_00072.pdb # 6: usage_00073.pdb # 7: usage_00074.pdb # 8: usage_00075.pdb # 9: usage_00079.pdb # 10: usage_00080.pdb # 11: usage_00081.pdb # 12: usage_00082.pdb # 13: usage_00486.pdb # 14: usage_00487.pdb # 15: usage_00488.pdb # 16: usage_00489.pdb # 17: usage_00505.pdb # 18: usage_00506.pdb # 19: usage_00507.pdb # 20: usage_00508.pdb # 21: usage_01189.pdb # 22: usage_01190.pdb # 23: usage_01191.pdb # 24: usage_01192.pdb # # Length: 71 # Identity: 65/ 71 ( 91.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/ 71 ( 91.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/ 71 ( 8.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00016.pdb 1 -PDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 59 usage_00017.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00018.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00019.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00072.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00073.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00074.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00075.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00079.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00080.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00081.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00082.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00486.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00487.pdb 1 ------PQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 54 usage_00488.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00489.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00505.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00506.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00507.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_00508.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_01189.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_01190.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_01191.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 usage_01192.pdb 1 PPDELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW 60 PQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAW usage_00016.pdb 60 RNAPRCIGRIQ 70 usage_00017.pdb 61 RNAPRCIGRIQ 71 usage_00018.pdb 61 RNAPRCIGRIQ 71 usage_00019.pdb 61 RNAPRCIGRIQ 71 usage_00072.pdb 61 RNAPRCIGRIQ 71 usage_00073.pdb 61 RNAPRCIGRIQ 71 usage_00074.pdb 61 RNAPRCIGRIQ 71 usage_00075.pdb 61 RNAPRCIGRIQ 71 usage_00079.pdb 61 RNAPRCIGRIQ 71 usage_00080.pdb 61 RNAPRCIGRIQ 71 usage_00081.pdb 61 RNAPRCIGRIQ 71 usage_00082.pdb 61 RNAPRCIGRIQ 71 usage_00486.pdb 61 RNAPRCIGRIQ 71 usage_00487.pdb 55 RNAPRCIGRIQ 65 usage_00488.pdb 61 RNAPRCIGRIQ 71 usage_00489.pdb 61 RNAPRCIGRIQ 71 usage_00505.pdb 61 RNAPRCIGRIQ 71 usage_00506.pdb 61 RNAPRCIGRIQ 71 usage_00507.pdb 61 RNAPRCIGRIQ 71 usage_00508.pdb 61 RNAPRCIGRIQ 71 usage_01189.pdb 61 RNAPRCIGRIQ 71 usage_01190.pdb 61 RNAPRCIGRIQ 71 usage_01191.pdb 61 RNAPRCIGRIQ 71 usage_01192.pdb 61 RNAPRCIGRIQ 71 RNAPRCIGRIQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################