################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:45:01 2021 # Report_file: c_1084_130.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00008.pdb # 2: usage_00392.pdb # 3: usage_01143.pdb # 4: usage_01277.pdb # 5: usage_01311.pdb # 6: usage_01336.pdb # 7: usage_01621.pdb # # Length: 57 # Identity: 3/ 57 ( 5.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 30/ 57 ( 52.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 57 ( 31.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 DLMEAMAMGSVEASYKCLAAALIVL-T-E------SGRSAHQVARYRPRAPIIAVT- 48 usage_00392.pdb 1 -PTEATAVGAVEASFKCCSGAIIVL-T-K------SGRSAHQVARYRPRAPIIAVT- 47 usage_01143.pdb 1 -----TTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP-NSVA---- 47 usage_01277.pdb 1 -PTEATAVGAVEASFKCCSGAIIVL-T-K------SGRSAHQVARYRPRAPIIAVT- 47 usage_01311.pdb 1 -PTEATAVGAVEASFKCCSGAIIVL-T-K------SGRSAHQVARYRPRAPIIAVT- 47 usage_01336.pdb 1 -LMEAMAMGSVEASYKCLAAALIVL-T-E------SGRSAHQVARYRPRAPIIAVTR 48 usage_01621.pdb 1 DPTEATAVGAVEASFKCCSGAIIVL-T-K------SGRSAHQVARYRPRAPIIAVT- 48 a g veas kc a Ivl t SgrsahqvaryrP apii #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################