################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:23:01 2021 # Report_file: c_1387_81.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00044.pdb # 2: usage_00093.pdb # 3: usage_00101.pdb # 4: usage_00102.pdb # 5: usage_00104.pdb # 6: usage_00491.pdb # 7: usage_00559.pdb # 8: usage_00560.pdb # 9: usage_00561.pdb # 10: usage_00562.pdb # 11: usage_00599.pdb # 12: usage_00732.pdb # 13: usage_00841.pdb # 14: usage_01225.pdb # 15: usage_01418.pdb # 16: usage_01458.pdb # 17: usage_02166.pdb # 18: usage_02167.pdb # 19: usage_02168.pdb # 20: usage_02169.pdb # 21: usage_02170.pdb # 22: usage_02171.pdb # 23: usage_02207.pdb # 24: usage_02509.pdb # # Length: 87 # Identity: 43/ 87 ( 49.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 44/ 87 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/ 87 ( 41.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAIHRAVRK--A------------------ 40 usage_00093.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-HLYG-IA-GST 52 usage_00101.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-HLYG-IA-GST 52 usage_00102.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-HLYG-IA-GST 52 usage_00104.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-HLYG-IA-GST 52 usage_00491.pdb 1 TLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-AH----------- 44 usage_00559.pdb 1 -LTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGI--AH-L-Y--GI-AG--- 49 usage_00560.pdb 1 -LTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGI--AH-L-Y--GI-AG--- 49 usage_00561.pdb 1 TLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRK--AGIAH-L-Y--G-IA-GST 52 usage_00562.pdb 1 -LTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGI--AH-L-Y--GI-AG-ST 51 usage_00599.pdb 1 -LTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GIA------------- 42 usage_00732.pdb 1 -LTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGI--AH-L-Y--GI-AG--- 49 usage_00841.pdb 1 -LTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGI--AH-L-Y--GI-AG--- 49 usage_01225.pdb 1 -LTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGI--AH-L-Y--GI-AG--- 49 usage_01418.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-H---------- 44 usage_01458.pdb 1 -LTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGI--AH-L-Y--GI-AG--- 49 usage_02166.pdb 1 -LTRFVMEE-G----TGELTQLLNSLCTAVKAISSAVRK--A--GI-A-H---------- 38 usage_02167.pdb 1 -LTRFVMEE-G---GTGELTQLLNSLCTAVKAISSAVRK--A--GI-A------------ 38 usage_02168.pdb 1 -LTRFVMEE-G----TGELTQLLNSLCTAVKAISSAVRK--A--GI-A------------ 37 usage_02169.pdb 1 TLTRFVMEE-G---GTGELTQLLNSLCTAVKAISSAVRK--A--GI-A-H--L------- 41 usage_02170.pdb 1 -LTRFVMEE-G----TGELTQLLNSLCTAVKAISSAVRK--A--GI-A-H---------- 38 usage_02171.pdb 1 TLTRFVMEE-G---GTGELTQLLNSLCTAVKAISSAVRK--A--GI-A-H--L------- 41 usage_02207.pdb 1 TLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRK--A--GI-A-HLYG-IA-GST 52 usage_02509.pdb 1 -LTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGI--AH-L-Y--GI-AG--- 49 LTRFVME TGE TQLLNSLCTAVKAIs AVRK usage_00044.pdb 41 -------K-KLDVLSNDLVINVLKSS- 58 usage_00093.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSS- 77 usage_00101.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSS- 77 usage_00102.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSS- 77 usage_00104.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSS- 77 usage_00491.pdb 45 ---------KLDVLSNDLVINVLKSS- 61 usage_00559.pdb 50 ---------KLDVLSNDLVINVLKSS- 66 usage_00560.pdb 50 ---------KLDVLSNDLVINVLKSSF 67 usage_00561.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSSF 78 usage_00562.pdb 52 NVTGDQVK-KLDVLSNDLVINVLKSS- 76 usage_00599.pdb 43 ----D-QVKKLDVLSNDLVINVLKSSF 64 usage_00732.pdb 50 ------VK-KLDVLSNDLVMNMLKSS- 68 usage_00841.pdb 50 ------VK-KLDVLSNDLVMNMLKSS- 68 usage_01225.pdb 50 -------K-KLDVLSNDLVMNMLKSS- 67 usage_01418.pdb 45 ---------KLDVLSNDLVINVLKSS- 61 usage_01458.pdb 50 ------VK-KLDVLSNDLVMNMLKSS- 68 usage_02166.pdb 39 -------K-KLDVLSNDLVMNMLKSS- 56 usage_02167.pdb 39 -------K-KLDVLSNDLVMNMLKSS- 56 usage_02168.pdb 38 -------K-KLDVLSNDLVMNMLKSS- 55 usage_02169.pdb 42 -------K-KLDVLSNDLVMNMLKSS- 59 usage_02170.pdb 39 -------K-KLDVLSNDLVMNMLKSS- 56 usage_02171.pdb 42 -------K-KLDVLSNDLVMNMLKSS- 59 usage_02207.pdb 53 NVTGD-QVKKLDVLSNDLVINVLKSS- 77 usage_02509.pdb 50 ------VK-KLDVLSNDLVMNMLKSS- 68 KLDVLSNDLV N LKSS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################