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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Thu Jan 21 00:48:48 2021
# Report_file: c_0146_13.html
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#====================================
# Aligned_structures: 12
#   1: usage_00042.pdb
#   2: usage_00044.pdb
#   3: usage_00045.pdb
#   4: usage_00050.pdb
#   5: usage_00051.pdb
#   6: usage_00052.pdb
#   7: usage_00053.pdb
#   8: usage_00078.pdb
#   9: usage_00105.pdb
#  10: usage_00106.pdb
#  11: usage_00108.pdb
#  12: usage_00234.pdb
#
# Length:        128
# Identity:       14/128 ( 10.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     72/128 ( 56.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           24/128 ( 18.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00042.pdb         1  ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD   51
usage_00044.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD   52
usage_00045.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGPQMLLKYYSGD   52
usage_00050.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   52
usage_00051.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   52
usage_00052.pdb         1  ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   51
usage_00053.pdb         1  AQSVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   54
usage_00078.pdb         1  -QSVTQLGSHVSVSEGALVLLRCNYSSS------VPPYLFWYVQYPNQGLQLLLKYTSAA   53
usage_00105.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   52
usage_00106.pdb         1  ---VTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   51
usage_00108.pdb         1  ---GVTQPKHLSASMGGSVEIPFSFYYPWELAIVPNVRISWRRGHFH--GQSFYSTR---   52
usage_00234.pdb         1  --SVTQPDARVTVSEGASLQLRCKYSYS------ATPYLFWYVQYPRQGLQMLLKYYSGD   52
                              vtq    v vSeGas  lrc ysys        pylfWyvqyp    Q llky    

usage_00042.pdb        52  PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK  103
usage_00044.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK  104
usage_00045.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKG--T--GSKLS-FGK  104
usage_00050.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  104
usage_00051.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  104
usage_00052.pdb        52  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  103
usage_00053.pdb        55  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  106
usage_00078.pdb        54  TLVKGIN---GFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSES---PFGNEKLT-FGT  106
usage_00105.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  104
usage_00106.pdb        52  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  103
usage_00108.pdb        53  PPSIHKDYVNRLFLNWTEGQESGFLRISNLRKEDQSVYFCRVELDTRRS--GRQQLQSIK  110
usage_00234.pdb        53  PVVQGVN---GFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKG--T--GSKLS-FGK  104
                           p v g n   gfeaef ks  SfhLrk s h sD avYFCaVs        g kl  fgk

usage_00042.pdb       104  GAKLTVSP  111
usage_00044.pdb       105  GAKLTVS-  111
usage_00045.pdb       105  GAKLTVS-  111
usage_00050.pdb       105  GAKLTVSP  112
usage_00051.pdb       105  GAKLTVSP  112
usage_00052.pdb       104  GAKLTVSP  111
usage_00053.pdb       107  GAKLTVSP  114
usage_00078.pdb       107  GTRLTIIP  114
usage_00105.pdb       105  GAKLTVSP  112
usage_00106.pdb       104  GAKLTVSP  111
usage_00108.pdb       111  GTKLTIT-  117
usage_00234.pdb       105  GAKLTVSP  112
                           G kLT   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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