################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:15:39 2021 # Report_file: c_0435_53.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00024.pdb # 2: usage_00117.pdb # 3: usage_00282.pdb # 4: usage_00618.pdb # 5: usage_00691.pdb # # Length: 135 # Identity: 68/135 ( 50.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 85/135 ( 63.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 36/135 ( 26.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00024.pdb 1 -----------NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 49 usage_00117.pdb 1 AEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 60 usage_00282.pdb 1 -----------NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 49 usage_00618.pdb 1 AEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 60 usage_00691.pdb 1 AEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQE 60 VAVKMLK dAteKDLsDL SEMEmMKmIGkHKNIINLLGaCTQd usage_00024.pdb 50 GPLYVIVEYASKGNLREYLQARRPP-------------------------QLSSKDLVSC 84 usage_00117.pdb 61 GPLYVIVEYASKGNLREYLRARRPP-GMEYSYDIN----------RVPEEQMTFKDLVSC 109 usage_00282.pdb 50 GPLYVIVEYASKGNLREYLQARRPP-G---------------------EEQLSSKDLVSC 87 usage_00618.pdb 61 GPLYVIVEYASKGNLREYLRARRPPP----------------------EEQMTFKDLVSC 98 usage_00691.pdb 61 GPLYVIVECAAKGNLREFLRARRPP-G--------PDLSPDGPRSSEG--PLSFPVLVSC 109 GPLYVIVEyAsKGNLREyL ARRPP q kdLVSC usage_00024.pdb 85 AYQVARGMEYLASKK 99 usage_00117.pdb 110 TYQLARGMEYLASQK 124 usage_00282.pdb 88 AYQVARGMEYLASKK 102 usage_00618.pdb 99 TYQLARGMEYLASQK 113 usage_00691.pdb 110 AYQVARGMQYLESRK 124 YQ ARGMeYLaS K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################