################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:02 2021 # Report_file: c_1205_54.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00223.pdb # 2: usage_00937.pdb # 3: usage_00938.pdb # 4: usage_01137.pdb # 5: usage_01173.pdb # 6: usage_01176.pdb # 7: usage_01177.pdb # 8: usage_01178.pdb # 9: usage_01179.pdb # 10: usage_01188.pdb # 11: usage_01892.pdb # 12: usage_01898.pdb # 13: usage_02086.pdb # 14: usage_02235.pdb # # Length: 27 # Identity: 9/ 27 ( 33.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 27 ( 85.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 2/ 27 ( 7.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00223.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNL- 25 usage_00937.pdb 1 CLKVRGELAPDAKSFVLNLGKDSNNLC 27 usage_00938.pdb 1 CLKVRGELAPDAKSFVLNLGKDSNNLC 27 usage_01137.pdb 1 TLKITGSIADGTDGFVINLGQGTDKLN 27 usage_01173.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01176.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01177.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01178.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01179.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01188.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01892.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_01898.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNL- 25 usage_02086.pdb 1 -LRVRGEVAPDAKSFVLNLGKDSNNLC 26 usage_02235.pdb 1 -LKVRGELAPDAKSFVLNLGKDSNNLC 26 L vrGe ApdaksFVlNLGkdsnnL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################