################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:28:03 2021 # Report_file: c_1256_68.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00087.pdb # 2: usage_00769.pdb # 3: usage_00770.pdb # 4: usage_01003.pdb # 5: usage_01046.pdb # 6: usage_01458.pdb # 7: usage_01994.pdb # 8: usage_02644.pdb # 9: usage_02645.pdb # 10: usage_02646.pdb # 11: usage_02689.pdb # 12: usage_02993.pdb # 13: usage_03759.pdb # 14: usage_03760.pdb # 15: usage_03996.pdb # # Length: 47 # Identity: 0/ 47 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 47 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 47 ( 72.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00087.pdb 1 K---VLVIYDTRT--G--NTKK-AELVAEGARSLEGTEVRLKH---- 35 usage_00769.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_00770.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_01003.pdb 1 ----AKVLVLYYS-YG--HIETMARAVAEGASKVDGAEVVVKRVP-- 38 usage_01046.pdb 1 ----VKIELFTSPMCPHC---PAAKRVVEEVANEMPDAVEVEYI--- 37 usage_01458.pdb 1 ----A--VIGTQR--G--KFRLVADAVVESLARVG-IELTVKELD-- 34 usage_01994.pdb 1 -GMAKKTLILYYSWSG--ETKKMAEKINSEIK---D-SELKEV-K-- 37 usage_02644.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_02645.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_02646.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_02689.pdb 1 ----AKVLVLYYS-YG--HIETMARAVAEGASKVDGAEVVVKRVPET 40 usage_02993.pdb 1 -----NTVVVYHSGYG--HTHRA-----EAVAEGAE--ATLHAID-- 31 usage_03759.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_03760.pdb 1 ----AKVLVLYYSMYG--HIETMARAVAEGASKVDGAEVVVKRVP-- 39 usage_03996.pdb 1 ----KKVLTT---------FTVLADMVQNVAG--DKLVVESIT---- 28 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################