################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:29:42 2021 # Report_file: c_0797_27.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00045.pdb # 2: usage_00078.pdb # 3: usage_00129.pdb # 4: usage_00130.pdb # 5: usage_00287.pdb # 6: usage_00343.pdb # # Length: 81 # Identity: 11/ 81 ( 13.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 26/ 81 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/ 81 ( 14.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00045.pdb 1 ----FVPFVTLGDP--GIEQSLKIIDTLIDAGADALELGVPFSDPLA-DGPTIQNANLRA 53 usage_00078.pdb 1 -ENANVAYTVLGYP--NLQTSEAFLQRLDQSPIDILELGVAYSDPIADG-EIIADAAKIA 56 usage_00129.pdb 1 DKGAFVPFVTIGDP--SPELSLKIIQTLVDNGADALELGFPFSDPLA-DGPVIQGANLRS 57 usage_00130.pdb 1 DKGAFVPFVTIGDP--SPELSLKIIQTLVDNGADALELGFPFSDPLA-DGPVIQGANLRS 57 usage_00287.pdb 1 ----LIPFITAGDP--DLETTLELVRALVEAGADIIELGIPFSDPLA-DGPTIQRASQRA 53 usage_00343.pdb 1 ---IFVPYIMAGDHEKGLDGLAETIHFLEDLGVSAIEVGIPFSDPVA-DGPVIEEAGLRS 56 vp Gdp L g d ElG pfSDP A d p I A r usage_00045.pdb 54 FAAGVTPAQCFEMLALIREKH 74 usage_00078.pdb 57 LDQGVDIHSVFELLARI---- 73 usage_00129.pdb 58 LAAGTTSSDCFDIITKVRAQH 78 usage_00130.pdb 58 LAAGTTSSDCFDIITKVRAQH 78 usage_00287.pdb 54 LASGTTLDKVFEMVRELRE-- 72 usage_00343.pdb 57 LAHGTSTQALVETLKTI---- 73 la G f #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################