################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:16:39 2021 # Report_file: c_0330_1.html ################################################################################################ #==================================== # Aligned_structures: 10 # 1: usage_00013.pdb # 2: usage_00021.pdb # 3: usage_00107.pdb # 4: usage_00122.pdb # 5: usage_00123.pdb # 6: usage_00124.pdb # 7: usage_00125.pdb # 8: usage_00127.pdb # 9: usage_00128.pdb # 10: usage_00133.pdb # # Length: 162 # Identity: 38/162 ( 23.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 111/162 ( 68.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/162 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00013.pdb 1 SIVTKSIVNADAEARYLSPGELDRIKSFVTSGERRVRIAETMTGARERIIKQAGDQLFGK 60 usage_00021.pdb 1 -LAVATITQAEQQDRFLGRGELDELASYFASGAKRLEIAQLLTENSEIIVSRAANRIFQK 59 usage_00107.pdb 1 -IVTKSIVNADAEARYLSPGELDRIKSFVLSGARRVRIAQTLTENRERIVKQAGDQLFQK 59 usage_00122.pdb 1 SVVTKSIVNADAEARYLSPGELDRIKNFVSTGERRLRIAQTLTENRERIVKQAGDQLFQK 60 usage_00123.pdb 1 SVVTKSIVNADAEARYLSPGELDRIKNFVSTGERRLRIAQTLTENRERIVKQAGDQLFQK 60 usage_00124.pdb 1 SVVTKSIVNADAEARYLSPGELDRIKNFVSTGERRLRIAQTLTENRERIVKQAGDQLFQK 60 usage_00125.pdb 1 SVVTKSIVNADAEARYLSPGELDRIKNFVSTGERRLRIAQTLTENRERIVKQAGDQLFQK 60 usage_00127.pdb 1 SIVTKSIVNADAEARYLSPGELDRIKSFVSSGEKRLRIAQILTDNRERIVKQAGDQLFQK 60 usage_00128.pdb 1 SIVTKSIVNADAEARYLSPGELDRIKSFVSSGEKRLRIAQILTDNRERIVKQAGDQLFQK 60 usage_00133.pdb 1 SVLTKAIVNADAEARYLSPGELDRIKSFVASGERRLRIAQTLTEARERIVKQAGDQLFQI 60 tk IvnAdaeaRyLspGELDrik fv G R rIAq lT rErIvkqAgdqlFqk usage_00013.pdb 61 RPDVVSPGGNAYGADMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGVVGVREMYKSLGT 120 usage_00021.pdb 60 IE-------------NMAKSLRDLSWFLRYATYAIVAGDPNIIVVNT-RGLREIIENA-C 104 usage_00107.pdb 60 RPDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVSGDVTPIEEIGLVGVREMYKSLGT 119 usage_00122.pdb 61 RPDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGVREMYNSLGT 120 usage_00123.pdb 61 RPDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGVREMYNSLGT 120 usage_00124.pdb 61 RPDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGVREMYNSLGT 120 usage_00125.pdb 61 RPDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGVREMYNSLGT 120 usage_00127.pdb 61 RPDVVSPGGNAYGQEMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGIVGVREMYKSLGT 120 usage_00128.pdb 61 RPDVVSPGGNAYGQEMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGIVGVREMYKSLGT 120 usage_00133.pdb 61 RPDVVSPGGNAYGEKMTALCLRDLDYYLRLVTYGIVAGDVTPIEEIGIIGVKEMYNSLQT 120 rp mtA cLRDLdyyLRl TYgIVaGDvtpIeeig GvrEmy sl t usage_00013.pdb 121 PIEAIAEGVRAMKSVATSLL--SGADAAEAGSYFDYLIGAMS 160 usage_00021.pdb 105 SGEATIVALQEIKAASLSYFRKDPEAAEIVSQYMDVLITEFK 146 usage_00107.pdb 120 PISAVAEGVKCMKSVASSLL--SGEDSAEAGFYFDYVVGAMQ 159 usage_00122.pdb 121 PIPAVAEGIRAMKNVACSLL--SAEDAAEAGSYFDFVIGAM- 159 usage_00123.pdb 121 PIPAVAEGIRAMKNVACSLL--SAEDAAEAGSYFDFVIGAM- 159 usage_00124.pdb 121 PIPAVAEGIRAMKNVACSLL--SAEDAAEAGSYFDFVIGAM- 159 usage_00125.pdb 121 PIPAVAEGIRAMKNVACSLL--SAEDAAEAGSYFDFVIGAM- 159 usage_00127.pdb 121 PIDAVAAGVSAMKNVASSIL--SAEDAAEAGAYFDYVAGALA 160 usage_00128.pdb 121 PIDAVAAGVSAMKNVASSIL--SAEDAAEAGAYFDYVAGALA 160 usage_00133.pdb 121 PIPAVAEGVRAMKNVATSLL--SGDDAAEAGFYFDYLVGAM- 159 pi A a g mK va S l s daaeag YfD ga #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################