################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:20 2021 # Report_file: c_1200_89.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_01111.pdb # 2: usage_04112.pdb # 3: usage_04735.pdb # 4: usage_04736.pdb # 5: usage_04737.pdb # 6: usage_04754.pdb # 7: usage_04795.pdb # # Length: 67 # Identity: 0/ 67 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 67 ( 6.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 44/ 67 ( 65.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01111.pdb 1 --------NVLRVKGHQGRALGRDGMIEVTVTIRDNQ-------------PEKVTISGTA 39 usage_04112.pdb 1 IRRVAGRDLITVTNTF-TDMAGERV-HTLHTTVVG---I-----T--------------- 35 usage_04735.pdb 1 --------VLRVKGHQ-GRALGRDG-IEVTVTIRDNQ-------------PEKVTISGTA 37 usage_04736.pdb 1 -------NVLRVKGHQ-GRALGRDG-IEVTVTIRDNQ-------------PEKVTISGTA 38 usage_04737.pdb 1 --------VLRVKGHQ-GRALGRDG-IEVTVTIRDNQ-------------PEKVTISGTA 37 usage_04754.pdb 1 -------EVVVSEHQG-VA--AEQG-SLYLVWNVR--TELRIPVGYNAIEG-GSIRTP-- 44 usage_04795.pdb 1 --------VLRVKGHQ-GRALGRDG-IEVTVTIRDNQ-------------PEKVTISGTA 37 g g vt usage_01111.pdb 40 VILFHAE 46 usage_04112.pdb ------- usage_04735.pdb 38 VILFHAE 44 usage_04736.pdb 39 VILFHAE 45 usage_04737.pdb 38 VILFHAE 44 usage_04754.pdb ------- usage_04795.pdb 38 VILFHAE 44 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################