################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:42 2021 # Report_file: c_1162_82.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00165.pdb # 2: usage_00269.pdb # 3: usage_00304.pdb # 4: usage_00320.pdb # 5: usage_00338.pdb # 6: usage_00518.pdb # 7: usage_01276.pdb # # Length: 36 # Identity: 1/ 36 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 36 ( 11.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 36 ( 50.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00165.pdb 1 -AEFTLHARN----------PENNVVIGGDNIVF-- 23 usage_00269.pdb 1 -DLSFNFDKFV-------PNQKNIIFQGD-AS--VS 25 usage_00304.pdb 1 --VSFNYTRFK--------DDGSLIFQGD-AK--IW 23 usage_00320.pdb 1 GSLSFSFPKFA-------PNQPYLINQGD-AL--VT 26 usage_00338.pdb 1 DDLSFKFKNFS-------QNGKDLSFQGN-AS--VI 26 usage_00518.pdb 1 NTDSFTFSKFK-------PNQPNLKKQGD-AT--VT 26 usage_01276.pdb 1 NTVNFTYPDFWSYSLKNG---TEITFLGD-AT--RI 30 f f G a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################