################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 04:38:12 2021 # Report_file: c_0752_8.html ################################################################################################ #==================================== # Aligned_structures: 34 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00010.pdb # 4: usage_00019.pdb # 5: usage_00093.pdb # 6: usage_00094.pdb # 7: usage_00122.pdb # 8: usage_00156.pdb # 9: usage_00157.pdb # 10: usage_00177.pdb # 11: usage_00178.pdb # 12: usage_00179.pdb # 13: usage_00181.pdb # 14: usage_00182.pdb # 15: usage_00188.pdb # 16: usage_00189.pdb # 17: usage_00206.pdb # 18: usage_00218.pdb # 19: usage_00219.pdb # 20: usage_00220.pdb # 21: usage_00221.pdb # 22: usage_00222.pdb # 23: usage_00223.pdb # 24: usage_00243.pdb # 25: usage_00252.pdb # 26: usage_00258.pdb # 27: usage_00265.pdb # 28: usage_00267.pdb # 29: usage_00268.pdb # 30: usage_00270.pdb # 31: usage_00271.pdb # 32: usage_00272.pdb # 33: usage_00273.pdb # 34: usage_00295.pdb # # Length: 55 # Identity: 3/ 55 ( 5.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 55 ( 21.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 55 ( 23.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00008.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00010.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKL----- 49 usage_00019.pdb 1 --VVRMPAMEFARICRDLAQFSESVVICCTK-GVKFSASG-D-V-GTANIKL--- 46 usage_00093.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00094.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00122.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQTS- 53 usage_00156.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00157.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00177.pdb 1 SVTFTTDGDVLKDIARDLSLVGEEVEISADENTVTLSTEEAG-RTYKSLLKQ--- 51 usage_00178.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00179.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00181.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00182.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00188.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00189.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKL----- 49 usage_00206.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00218.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00219.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00220.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00221.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00222.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00223.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00243.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00252.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00258.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00265.pdb 1 AVNFTTDESVLNVIAADVTLVGEE-RISTEEDKIKIEAG-EEGKRYVAFLK---- 49 usage_00267.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00268.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQ--- 51 usage_00270.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLS---- 50 usage_00271.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQTSN 54 usage_00272.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQTS- 53 usage_00273.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKLSQTS- 53 usage_00295.pdb 1 SCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGEL-GNGNIKL----- 49 I rDl g Is vk sa l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################