################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:52:21 2021 # Report_file: c_0159_1.html ################################################################################################ #==================================== # Aligned_structures: 29 # 1: usage_00001.pdb # 2: usage_00007.pdb # 3: usage_00008.pdb # 4: usage_00009.pdb # 5: usage_00010.pdb # 6: usage_00011.pdb # 7: usage_00012.pdb # 8: usage_00021.pdb # 9: usage_00022.pdb # 10: usage_00023.pdb # 11: usage_00024.pdb # 12: usage_00033.pdb # 13: usage_00034.pdb # 14: usage_00047.pdb # 15: usage_00048.pdb # 16: usage_00049.pdb # 17: usage_00050.pdb # 18: usage_00051.pdb # 19: usage_00052.pdb # 20: usage_00053.pdb # 21: usage_00069.pdb # 22: usage_00070.pdb # 23: usage_00088.pdb # 24: usage_00089.pdb # 25: usage_00090.pdb # 26: usage_00091.pdb # 27: usage_00092.pdb # 28: usage_00093.pdb # 29: usage_00094.pdb # # Length: 216 # Identity: 98/216 ( 45.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 107/216 ( 49.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/216 ( 8.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 --------RRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00007.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00008.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00009.pdb 1 GYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 60 usage_00010.pdb 1 ---------RLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 51 usage_00011.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00012.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00021.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00022.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00023.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00024.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00033.pdb 1 GYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 60 usage_00034.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00047.pdb 1 --------RRVVIDPVTRIEGHMRCEVNVDENNVIQNAVSTGTMWRGLEVILRGRDPRDA 52 usage_00048.pdb 1 ----------IVVDPITRIEGHLRIEAQMDG-ATIAQAYSSGTMVRGIETILKGRDPRDA 49 usage_00049.pdb 1 ----------IVVDPITRIEGHLRIEAQMDG-ATIAQAYSSGTMVRGIETILKGRDPRDA 49 usage_00050.pdb 1 ----------IVVDPITRIEGHLRIEAQMDG-ATIAQAYSSGTMVRGIETILKGRDPRDA 49 usage_00051.pdb 1 --------RRIVVDPVTRIEGHMRCEVNIDSNNVITNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00052.pdb 1 --------RRIVVDPVTRIEGHMRCEVNIDSNNVITNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00053.pdb 1 --------RRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00069.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00070.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00088.pdb 1 --------RRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00089.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00090.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00091.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00092.pdb 1 --------RRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTGTMWRGLEVILKGRDPRDA 52 usage_00093.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 usage_00094.pdb 1 --------RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDA 52 VvDP TRIEGH R E I A S GTM RG E IL GRDPRDA usage_00001.pdb 53 WAFVERICGVCTGCHALASVRAVENALDIRIPKNAHLIREIMAKTLQVHDHAVHFYHLHA 112 usage_00007.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00008.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00009.pdb 61 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 120 usage_00010.pdb 52 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 111 usage_00011.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00012.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00021.pdb 53 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHAHLVHFYQLAG 111 usage_00022.pdb 53 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHAHLVHFYQLAG 111 usage_00023.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00024.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00033.pdb 61 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHNHLVHFYQLAG 119 usage_00034.pdb 53 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHNHLVHFYQLAG 111 usage_00047.pdb 53 WAFVERICGVCTGCHALASVRAVEDALDIKIPHNATLIREIMAKTLQIHDHIVHFYHLHA 112 usage_00048.pdb 50 WAFVQRICGVCTLVHGIASVRAVEDALRIELPLNAQLIRNLMIGAQYIHDHVMHFYHLHA 109 usage_00049.pdb 50 WAFVQRICGVCTLVHGIASVRAVEDALRIELPLNAQLIRNLMIGAQYIHDHVMHFYHLHA 109 usage_00050.pdb 50 WAFVQRICGVCTLVHGIASVRAVEDALRIELPLNAQLIRNLMIGAQYIHDHVMHFYHLHA 109 usage_00051.pdb 53 WAFVERICGVCTGTHALTSIRAVENALGIAIPDNANCIRNMMQATLHVHDHLVHFYHLHA 112 usage_00052.pdb 53 WAFVERICGVCTGTHALTSIRAVENALGIAIPDNANCIRNMMQATLHVHDHLVHFYHLHA 112 usage_00053.pdb 53 WAFVERICGVCTGCHALASVRAVENALDIRIPKNAHLIREIMAKTLQVHDHAVHFYHLHA 112 usage_00069.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00070.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00088.pdb 53 WAFVERICGVCTGCHALASVRAVENALDIRIPKNAHLIREIMAKTLQVHDHAVHFYHLHA 112 usage_00089.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00090.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00091.pdb 53 WAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 112 usage_00092.pdb 53 WAFVERICGVCTGCHALASVRAVENALDIRIPKNAHLIREIMAKTLQVHDHAVHFYHLHA 112 usage_00093.pdb 53 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 111 usage_00094.pdb 53 WAFVERICGV-TGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAG 111 WAFV RICGV T H S A E A I P NA IR M H H HFY L usage_00001.pdb 113 LDWVDVMSALKADPKRTSELQQLVSPAHPLSSAGYFRDIQNRLKRFVESGQLGPFMNGYW 172 usage_00007.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00008.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00009.pdb 121 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 179 usage_00010.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 usage_00011.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00012.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00021.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 usage_00022.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 usage_00023.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00024.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00033.pdb 120 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 178 usage_00034.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 usage_00047.pdb 113 LDWVNPVNALKADPQATSELQKLVSPHHPMSSPGYFKDIQIRIQKFVDSGQLGIFKNGYW 172 usage_00048.pdb 110 LDWVDVVSALSADPRATSELAQSIS-AWPKSSPGYFADTQKRIKTFVESGQLGIFANGYW 168 usage_00049.pdb 110 LDWVDVVSALSADPRATSELAQSIS-AWPKSSPGYFADTQKRIKTFVESGQLGIFANGYW 168 usage_00050.pdb 110 LDWVDVVSALSADPRATSELAQSIS-AWPKSSPGYFADTQKRIKTFVESGQLGIFANGYW 168 usage_00051.pdb 113 LDWVDVVAALKADPHQTSAIAQSLS-AWPLSSPGYFRDLQNRLKRFIESGQLGPFRNGYW 171 usage_00052.pdb 113 LDWVDVVAALKADPHQTSAIAQSLS-AWPLSSPGYFRDLQNRLKRFIESGQLGPFRNGYW 171 usage_00053.pdb 113 LDWVDVMSALKADPKRTSELQQLVSPAHPLSSAGYFRDIQNRLKRFVESGQLGPFMNGYW 172 usage_00069.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00070.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00088.pdb 113 LDWVDVMSALKADPKRTSELQQLVSPAHPLSSAGYFRDIQNRLKRFVESGQLGPFMNGYW 172 usage_00089.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00090.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00091.pdb 113 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 171 usage_00092.pdb 113 LDWVDVMSALKADPKRTSELQQLVSPAHPLSSAGYFRDIQNRLKRFVESGQLGPFMNGYW 172 usage_00093.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 usage_00094.pdb 112 MDWIDVLDALKADPRKTSELAQSLS-SWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYW 170 DW dv AL ADP TS q S P SS GYF D Q R k F e GQLG F NGYW usage_00001.pdb 173 GSKAYVLPPEANLMAVTHYLEALDLQKEWVKIHTIF 208 usage_00007.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00008.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00009.pdb 180 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 215 usage_00010.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 usage_00011.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00012.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00021.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 usage_00022.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 usage_00023.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00024.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00033.pdb 179 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 214 usage_00034.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 usage_00047.pdb 173 SNPAYKLSPEADLMAVTHYLEALDFQKEIVKIHAIF 208 usage_00048.pdb 169 GHPAYRLPPEANLMAVAHYLEALAWQRDTA------ 198 usage_00049.pdb 169 GHPAYRLPPEANLMAVAHYLEALAWQRDTA------ 198 usage_00050.pdb 169 GHPAYRLPPEANLMAVAHYLEALAWQRDTA------ 198 usage_00051.pdb 172 GHPAMKLPPEANLLAVAHYLEALDFQKEIVKIHTVF 207 usage_00052.pdb 172 GHPAMKLPPEANLLAVAHYLEALDFQKEIVKIHTVF 207 usage_00053.pdb 173 GSKAYVLPPEANLMAVTHYLEALDLQKEWVKIHTIF 208 usage_00069.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00070.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00088.pdb 173 GSKAYVLPPEANLMAVTHYLEALDLQKEWVKIHTIF 208 usage_00089.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00090.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00091.pdb 172 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 207 usage_00092.pdb 173 GSKAYVLPPEANLMAVTHYLEALDLQKEWVKIHTIF 208 usage_00093.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 usage_00094.pdb 171 GHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVF 206 g LpPEAnL HYLEAL Q #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################