################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:56:38 2021 # Report_file: c_0766_13.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00054.pdb # 2: usage_00089.pdb # 3: usage_00090.pdb # 4: usage_00093.pdb # 5: usage_00096.pdb # 6: usage_00097.pdb # 7: usage_00104.pdb # 8: usage_00105.pdb # # Length: 99 # Identity: 3/ 99 ( 3.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 99 ( 24.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 58/ 99 ( 58.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00054.pdb 1 DVIVTENM-----FGDILSDLASVITGSLGML------------PSASLRSDR---FG-M 39 usage_00089.pdb 1 DTIVTNNI-----FGDILSDEASMITGSIGML------------PSASLSDSG---PG-L 39 usage_00090.pdb 1 DTIVTNNI-----FGDILSDEASMITGSIGML------------PSASLSDSG---PG-L 39 usage_00093.pdb 1 DVIVAEVRSTSHK-PDEIYGMIERLSPG-TRKIELFGRPHNVQPNWITLG-NQLDGIHL- 56 usage_00096.pdb 1 DVLLTGNM-----FGDILSDEASQLTGSIGML------------PSASLG-EG---RA-M 38 usage_00097.pdb 1 DVLLTGNM-----FGDILSDEASQLTGSIGML------------PSASLG-EG---RA-M 38 usage_00104.pdb 1 DVIVTENM-----FGDILSDEASVITGSLGML------------PSASLRSDR---FG-M 39 usage_00105.pdb 1 DVIVTENM-----FGDILSDEASVITGSLGML------------PSASLRSDR---FG-M 39 D t n gDilsd as tgs gml psasL usage_00054.pdb 40 YEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFG---- 74 usage_00089.pdb 40 FEPIHGSAPDIAGQDKANPLATILSAAMLLKYG------ 72 usage_00090.pdb 40 FEPIHGSAPDIAGQDKANPLATILSAAMLLKYGL----- 73 usage_00093.pdb 57 ------L---------------------DPDVVARFKQR 68 usage_00096.pdb 39 YEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLN---- 73 usage_00097.pdb 39 YEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLN---- 73 usage_00104.pdb 40 YEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFG---- 74 usage_00105.pdb 40 YEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFG---- 74 s l #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################