################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:31:07 2021 # Report_file: c_1393_67.html ################################################################################################ #==================================== # Aligned_structures: 33 # 1: usage_00014.pdb # 2: usage_00028.pdb # 3: usage_00029.pdb # 4: usage_00030.pdb # 5: usage_00142.pdb # 6: usage_00147.pdb # 7: usage_00215.pdb # 8: usage_00216.pdb # 9: usage_00254.pdb # 10: usage_00355.pdb # 11: usage_00415.pdb # 12: usage_00482.pdb # 13: usage_00483.pdb # 14: usage_00484.pdb # 15: usage_00549.pdb # 16: usage_00550.pdb # 17: usage_00559.pdb # 18: usage_00564.pdb # 19: usage_00634.pdb # 20: usage_00635.pdb # 21: usage_00643.pdb # 22: usage_00644.pdb # 23: usage_00767.pdb # 24: usage_00768.pdb # 25: usage_00769.pdb # 26: usage_00770.pdb # 27: usage_00861.pdb # 28: usage_00862.pdb # 29: usage_00983.pdb # 30: usage_01175.pdb # 31: usage_01176.pdb # 32: usage_01312.pdb # 33: usage_01343.pdb # # Length: 66 # Identity: 0/ 66 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 66 ( 3.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 66 ( 78.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00014.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00028.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00029.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00030.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00142.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGALSGGQVLKKIAQ 45 usage_00147.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00215.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00216.pdb 1 ---------TPATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00254.pdb 1 ---------TPATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00355.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00415.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00482.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00483.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00484.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00549.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00550.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00559.pdb 1 DFYSYLKR--CPDAGRRFLL------A------MKA-----------SNLAFHEIPRLLD 35 usage_00564.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIA- 43 usage_00634.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00635.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_00643.pdb 1 ---------SAAGQAYVDRV------RQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQ 45 usage_00644.pdb 1 ---------SAAGQAYVDRV------RQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQ 45 usage_00767.pdb 1 ----------PAMQRYVKRL------HEVGRTEPELLVAHAYTRYLADLSGGQVLKKIAQ 44 usage_00768.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLADLSGGQVLKKIAQ 45 usage_00769.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00770.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00861.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00862.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_00983.pdb 1 --------SPEARYYLVSSVNELRYPNA-Y--TNYFSQALLDIFGHD------------- 36 usage_01175.pdb 1 ---------TPATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 usage_01176.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_01312.pdb 1 ----------PATQHYVKRL------HEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQ 44 usage_01343.pdb 1 ---------TPAMQRYVKRL------HEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQ 45 a v usage_00014.pdb 45 KALD-- 48 usage_00028.pdb 45 KALD-- 48 usage_00029.pdb 45 KA---- 46 usage_00030.pdb 46 KA---- 47 usage_00142.pdb 46 KALD-- 49 usage_00147.pdb 45 KA---- 46 usage_00215.pdb 45 KALA-- 48 usage_00216.pdb 46 KALA-- 49 usage_00254.pdb 46 KAMA-- 49 usage_00355.pdb ------ usage_00415.pdb 46 KALD-- 49 usage_00482.pdb 46 KA---- 47 usage_00483.pdb 46 KALD-- 49 usage_00484.pdb 46 KA---- 47 usage_00549.pdb 45 KAMA-- 48 usage_00550.pdb 45 KAMA-- 48 usage_00559.pdb ------ usage_00564.pdb ------ usage_00634.pdb 45 KA---- 46 usage_00635.pdb 45 KA---- 46 usage_00643.pdb 46 NAM--- 48 usage_00644.pdb 46 NAM--- 48 usage_00767.pdb 45 KA---- 46 usage_00768.pdb 46 K----- 46 usage_00769.pdb 46 KALD-- 49 usage_00770.pdb 46 KALD-- 49 usage_00861.pdb 46 KA---- 47 usage_00862.pdb 46 KA---- 47 usage_00983.pdb 37 ----SD 38 usage_01175.pdb 46 KAMA-- 49 usage_01176.pdb 45 KAMA-- 48 usage_01312.pdb 45 KAMA-- 48 usage_01343.pdb 46 KALD-- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################