################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:54:50 2021 # Report_file: c_0006_7.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00012.pdb # 2: usage_00013.pdb # 3: usage_00014.pdb # 4: usage_00015.pdb # 5: usage_00016.pdb # 6: usage_00017.pdb # 7: usage_00103.pdb # 8: usage_00104.pdb # 9: usage_00105.pdb # 10: usage_00115.pdb # 11: usage_00116.pdb # 12: usage_00117.pdb # 13: usage_00136.pdb # # Length: 136 # Identity: 76/136 ( 55.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 79/136 ( 58.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/136 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00012.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSY-NP 58 usage_00013.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK------ 53 usage_00014.pdb 1 RVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSY-NP 59 usage_00015.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSY-NP 58 usage_00016.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSY-NP 58 usage_00017.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK-SSYNP 58 usage_00103.pdb 1 RVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDY-NP 59 usage_00104.pdb 1 -VFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDY-NP 58 usage_00105.pdb 1 RVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDY-NP 59 usage_00115.pdb 1 RVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK------ 54 usage_00116.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSY-NP 58 usage_00117.pdb 1 -VMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK------ 53 usage_00136.pdb 1 -VMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSS-NP 58 V D SSV IGDV L DD WPL VIRGD h IGART QDGS LH TH usage_00012.pdb 59 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 117 usage_00013.pdb 54 --SNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 111 usage_00014.pdb 60 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 118 usage_00015.pdb 59 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 117 usage_00016.pdb 59 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 117 usage_00017.pdb 59 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 117 usage_00103.pdb 60 G-GYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKV 118 usage_00104.pdb 59 G-GYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKV 117 usage_00105.pdb 60 G-GYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKV 118 usage_00115.pdb 55 -SGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 113 usage_00116.pdb 59 D-GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 117 usage_00117.pdb 54 --GNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKR 111 usage_00136.pdb 59 H-GNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKR 117 g PL IG DVT GH MLHGCTIGNRVL GM S DGAIvED V AG V K usage_00012.pdb 118 LESGYLYLGSPVKQ-- 131 usage_00013.pdb 112 LESGYLYLGSPVKQIR 127 usage_00014.pdb 119 LESGYLYLGSPVKQIR 134 usage_00015.pdb 118 LESGYLYLGSPVKQ-- 131 usage_00016.pdb 118 LESGYLYLGSPVKQ-- 131 usage_00017.pdb 118 LESGYLYLGSPVKQ-- 131 usage_00103.pdb 119 LESGFVYMGTPAKKVR 134 usage_00104.pdb 118 LESGFVYMGTPAKKVR 133 usage_00105.pdb 119 LESGFVYMGTPAKKVR 134 usage_00115.pdb 114 LESGYLYLGSPVKQIR 129 usage_00116.pdb 118 LESGYLYLGSPVKQIR 133 usage_00117.pdb 112 LESGYLYLGSPVKQIR 127 usage_00136.pdb 118 LESGYLYLGSPVKQIR 133 LESG Y G P K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################