################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:52:18 2021 # Report_file: c_0821_13.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00702.pdb # 2: usage_00703.pdb # 3: usage_00965.pdb # 4: usage_00966.pdb # 5: usage_00967.pdb # 6: usage_00968.pdb # 7: usage_00969.pdb # 8: usage_01024.pdb # 9: usage_01025.pdb # 10: usage_01026.pdb # 11: usage_01027.pdb # 12: usage_01028.pdb # 13: usage_01375.pdb # 14: usage_01376.pdb # 15: usage_01377.pdb # 16: usage_01378.pdb # 17: usage_01379.pdb # # Length: 105 # Identity: 93/105 ( 88.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 93/105 ( 88.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 12/105 ( 11.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00702.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_00703.pdb 1 SEDYRPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 60 usage_00965.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR-QLTEHHWLV 55 usage_00966.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR-QLTEHHWLV 55 usage_00967.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR-QLTEHHWLV 55 usage_00968.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR-QLTEHHWLV 55 usage_00969.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR-QLTEHHWLV 55 usage_01024.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01025.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01026.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01027.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01028.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01375.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01376.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01377.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01378.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 usage_01379.pdb 1 ----RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYARMQLTEHHWLV 56 RPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQGDRFGYAR QLTEHHWLV usage_00702.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA------EGNPFIFAFL 95 usage_00703.pdb 61 SDLDPRLEIKAIAETFPMDVLVWQGQIPA------EGNPFIFAFL 99 usage_00965.pdb 56 SDLDPRLEIKAIAETFP-DVLVWQGQIPA-A----EGNPFIFAFL 94 usage_00966.pdb 56 SDLDPRLEIKAIAETFP-DVLVWQGQIPAA----AEGNPFIFAFL 95 usage_00967.pdb 56 SDLDPRLEIKAIAETFP-DVLVWQGQIPA-A---AEGNPFIFAFL 95 usage_00968.pdb 56 SDLDPRLEIKAIAETFP-DVLVWQGQIPA-A---AEGNPFIFAFL 95 usage_00969.pdb 56 SDLDPRLEIKAIAETFP-DVLVWQGQIPA-A---AEGNPFIFAFL 95 usage_01024.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-----AEGNPFIFAFL 96 usage_01025.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-----AEGNPFIFAFL 96 usage_01026.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-A---AEGNPFIFAFL 97 usage_01027.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA------EGNPFIFAFL 95 usage_01028.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-----AEGNPFIFAFL 96 usage_01375.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-A----EGNPFIFAFL 96 usage_01376.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-AAH-AEGNPFIFAFL 99 usage_01377.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-A---AEGNPFIFAFL 97 usage_01378.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPA-A--A-EGNPFIFAFL 97 usage_01379.pdb 57 SDLDPRLEIKAIAETFPMDVLVWQGQIPAA----AEGNPFIFAFL 97 SDLDPRLEIKAIAETFP DVLVWQGQIPA EGNPFIFAFL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################