################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:02:53 2021 # Report_file: c_1197_2.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00233.pdb # 2: usage_01034.pdb # 3: usage_01061.pdb # 4: usage_01179.pdb # 5: usage_01378.pdb # 6: usage_01379.pdb # # Length: 87 # Identity: 0/ 87 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 12/ 87 ( 13.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 67/ 87 ( 77.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00233.pdb 1 TQT----------SVVFTVKS-------AP-PTNLGDKIYLTGN-I--PELGNWSTDTSG 39 usage_01034.pdb 1 -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS-- 33 usage_01061.pdb 1 -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS-- 33 usage_01179.pdb 1 ---TGHGVGLTLN---VHEGGCSIGPVGG-APLKKNMVLSNEPGYYMK------------ 41 usage_01378.pdb 1 -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS-- 33 usage_01379.pdb 1 -------------TVRFVVNN-------A--STTLGQNLYLTGN-V--AELGNWSTGS-- 33 f v a t lg lyltgn usage_00233.pdb 40 AVNNAQGPLLAP---NYPDWFYVFSVP 63 usage_01034.pdb 34 ---TAIGPAFNQVIHQYPTWYYD---- 53 usage_01061.pdb 34 ---TAIGPAFNQVIHQYPTWYYD---- 53 usage_01179.pdb --------------------------- usage_01378.pdb 34 ---TAIGPAFNQVIHQYPTWYYD---- 53 usage_01379.pdb 34 ---TAIGPAFNQVIHQYPTWYYD---- 53 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################