################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:00:57 2021 # Report_file: c_0436_10.html ################################################################################################ #==================================== # Aligned_structures: 13 # 1: usage_00040.pdb # 2: usage_00041.pdb # 3: usage_00052.pdb # 4: usage_00075.pdb # 5: usage_00111.pdb # 6: usage_00128.pdb # 7: usage_00141.pdb # 8: usage_00142.pdb # 9: usage_00153.pdb # 10: usage_00154.pdb # 11: usage_00161.pdb # 12: usage_00162.pdb # 13: usage_00163.pdb # # Length: 69 # Identity: 12/ 69 ( 17.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 69 ( 26.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/ 69 ( 5.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00040.pdb 1 IPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTD 60 usage_00041.pdb 1 IPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTD 60 usage_00052.pdb 1 VPQVIFTQPNLARVGLTEAEARAKEGEVEARVLPMSSVAKAEIINSRLGFVKMVTMN--G 58 usage_00075.pdb 1 LPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHG 60 usage_00111.pdb 1 IPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTD 60 usage_00128.pdb 1 LPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHG 60 usage_00141.pdb 1 IPSVIYTHPEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTD 60 usage_00142.pdb 1 IPSVIYTHPEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTD 60 usage_00153.pdb 1 IPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARA-LQTDGFVKILADKETD 59 usage_00154.pdb 1 IPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARA-LQTDGFVKILADKETD 59 usage_00161.pdb 1 IPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTD 60 usage_00162.pdb 1 IPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTD 60 usage_00163.pdb 1 IPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTD 60 P P A G TE g fP a A Gf K a usage_00040.pdb 61 RILGVHGI- 68 usage_00041.pdb 61 RILGVHGI- 68 usage_00052.pdb 59 RIVGVHAV- 66 usage_00075.pdb 61 ELLGGHLV- 68 usage_00111.pdb 61 RVLGVHVIG 69 usage_00128.pdb 61 ELLGGHLV- 68 usage_00141.pdb 61 RVLGVHVI- 68 usage_00142.pdb 61 RVLGVHVI- 68 usage_00153.pdb 60 RVLGGHII- 67 usage_00154.pdb 60 RVLGGHII- 67 usage_00161.pdb 61 RILGVHGI- 68 usage_00162.pdb 61 RILGVHGI- 68 usage_00163.pdb 61 RVLGVHVI- 68 lG H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################