################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:18:17 2021 # Report_file: c_1484_116.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00655.pdb # 2: usage_00931.pdb # 3: usage_02237.pdb # 4: usage_03239.pdb # 5: usage_03240.pdb # 6: usage_03241.pdb # 7: usage_03242.pdb # 8: usage_03243.pdb # 9: usage_03244.pdb # 10: usage_03245.pdb # 11: usage_03246.pdb # 12: usage_03271.pdb # 13: usage_04124.pdb # 14: usage_04726.pdb # 15: usage_04727.pdb # 16: usage_04728.pdb # 17: usage_04761.pdb # 18: usage_04762.pdb # # Length: 62 # Identity: 1/ 62 ( 1.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 62 ( 21.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 41/ 62 ( 66.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00655.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_00931.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_02237.pdb 1 SKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 45 usage_03239.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03240.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03241.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03242.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03243.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03244.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03245.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03246.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_03271.pdb 1 -----------------------DKWLYADITHFSQYWHYLNEQDETPGFADDITWDFIS 37 usage_04124.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_04726.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEA---------------- 43 usage_04727.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_04728.pdb 1 -KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG--------------- 44 usage_04761.pdb 1 -RKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEGG--------------- 44 usage_04762.pdb 1 -RKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEGG--------------- 44 sey ca lekff k kE usage_00655.pdb -- usage_00931.pdb -- usage_02237.pdb -- usage_03239.pdb -- usage_03240.pdb -- usage_03241.pdb -- usage_03242.pdb -- usage_03243.pdb -- usage_03244.pdb -- usage_03245.pdb -- usage_03246.pdb -- usage_03271.pdb 38 NV 39 usage_04124.pdb -- usage_04726.pdb -- usage_04727.pdb -- usage_04728.pdb -- usage_04761.pdb -- usage_04762.pdb -- #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################