################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:16:08 2021 # Report_file: c_1023_44.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00017.pdb # 2: usage_00078.pdb # 3: usage_00183.pdb # 4: usage_00315.pdb # 5: usage_00316.pdb # 6: usage_00317.pdb # 7: usage_00318.pdb # 8: usage_00319.pdb # 9: usage_00609.pdb # 10: usage_00725.pdb # 11: usage_00835.pdb # 12: usage_00836.pdb # 13: usage_01052.pdb # 14: usage_01168.pdb # # Length: 73 # Identity: 3/ 73 ( 4.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 25/ 73 ( 34.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 31/ 73 ( 42.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00017.pdb 1 DA---LIAGGKG-TRG-GVEKPLIKLCGR----CLIDYVVSPLLKSKV-NNIFIATSPN- 49 usage_00078.pdb 1 --DYALLVGAAPR-----------L----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 42 usage_00183.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_00315.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_00316.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_00317.pdb 1 --DYALLVGAAP-----------LL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 42 usage_00318.pdb 1 --DYALLVGAAP-R---------LL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 43 usage_00319.pdb 1 --DYALLVGAAP-R---------LL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 43 usage_00609.pdb 1 --DVAILVGSMP-RR-DGMERKDLL----KANVKIFKCQGAALDKYA-KKSVKVIVVGNP 51 usage_00725.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_00835.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_00836.pdb 1 --DYALLVGAAP-RK-AGMERRDLL----QVNGKIFTEQGRALAEVA-KKDVKVLVVGNP 51 usage_01052.pdb 1 --DVALLVGARP-RS---MERKDLL----SANAEIFTVQGAALNEVA-SRDVKVLVVGNP 49 usage_01168.pdb 1 --DVAILVGSMP-RR-DGMERKDLL----KANVKIFKCQGAALDKYA-KKSVKVIVVGNP 51 lvG p l if qg aL a vkv vvgN usage_00017.pdb 50 TPKTKEYINS--- 59 usage_00078.pdb 43 ANTNALIAYKNA- 54 usage_00183.pdb 52 ANTNALIAYKNA- 63 usage_00315.pdb 52 ANTNALIAYKNA- 63 usage_00316.pdb 52 ANTNALIAYKNA- 63 usage_00317.pdb 43 ANTNALIAYKNA- 54 usage_00318.pdb 44 ANTNALIAYKNA- 55 usage_00319.pdb 44 ANTNALIAYKNA- 55 usage_00609.pdb 52 ANTNCLTASKSA- 63 usage_00725.pdb 52 ANTNALIAYKNAP 64 usage_00835.pdb 52 ANTNALIAYKNA- 63 usage_00836.pdb 52 ANTNALIAYKNA- 63 usage_01052.pdb 50 ANTNAYIAMKSA- 61 usage_01168.pdb 52 ANTNCLTASKSA- 63 antn a k #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################