################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 03:04:45 2021 # Report_file: c_0713_12.html ################################################################################################ #==================================== # Aligned_structures: 24 # 1: usage_00004.pdb # 2: usage_00005.pdb # 3: usage_00006.pdb # 4: usage_00007.pdb # 5: usage_00110.pdb # 6: usage_00111.pdb # 7: usage_00112.pdb # 8: usage_00113.pdb # 9: usage_00114.pdb # 10: usage_00115.pdb # 11: usage_00116.pdb # 12: usage_00117.pdb # 13: usage_00135.pdb # 14: usage_00136.pdb # 15: usage_00137.pdb # 16: usage_00181.pdb # 17: usage_00182.pdb # 18: usage_00187.pdb # 19: usage_00188.pdb # 20: usage_00189.pdb # 21: usage_00190.pdb # 22: usage_00191.pdb # 23: usage_00277.pdb # 24: usage_00278.pdb # # Length: 74 # Identity: 21/ 74 ( 28.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 74 ( 28.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 74 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00004.pdb 1 -----ITVVGNLVDDPELRFTPSGAAVAKFRVASTP---------------DGESLFLTC 40 usage_00005.pdb 1 -----ITVVGNLVDDPELRFTPSGAAVAKFRVASTPRT-------------DGESLFLTC 42 usage_00006.pdb 1 --ETVITVVGNLVDDPELRFTPSGAAVAKFRVASTPRTF---DRQTNE-WKDGESLFLTC 54 usage_00007.pdb 1 -GETVITVVGNLVDDPELRFTPSGAAVAKFRVASTPRD--------------GESLFLTC 45 usage_00110.pdb 1 --DTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIY---D------WKDGEALFLRC 49 usage_00111.pdb 1 -----ITIVGNLTADPELRFTPSGAAVANFTVASTPRIY---DR----QWKDGEALFLRC 48 usage_00112.pdb 1 -GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRI---------------EALFLRC 44 usage_00113.pdb 1 --DTTITIVGNLTADPELRFTPSGAAVANFTVASTP-----------------EALFLRC 41 usage_00114.pdb 1 --DTTITIVGNLTADPELRFTPSGAAVANFTVASTPRI--------------YEALFLRC 44 usage_00115.pdb 1 ---TTITIVGNLTADPELRFTPSGAAVANFTVAST------------------EALFLRC 39 usage_00116.pdb 1 -----ITIVGNLTADPELRFTPSGAAVANFTVAST------------------EALFLRC 37 usage_00117.pdb 1 -----ITIVGNLTADPELRFTPSGAAVANFTVASTPR----------------EALFLRC 39 usage_00135.pdb 1 ---TTITVVGNLTADPELRFTPSGAAVANFTVASTPRMF---DRQSGE-WKDGEALFLRC 53 usage_00136.pdb 1 -----ITVVGNLTADPELRFTPSGAAVANFTVASTPRMF---DRQSGE-WKDGEALFLRC 51 usage_00137.pdb 1 --DTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMF---D---R--WKDGEALFLRC 50 usage_00181.pdb 1 ---TTITVVGNLTADPELRFTPSGAAVANFTVASTPRMFD--R-QSGE-WKDGEALFLRC 53 usage_00182.pdb 1 ---TTITVVGNLTADPELRFTPSGAAVANFTVASTPRMG---E------WKDGEALFLRC 48 usage_00187.pdb 1 ---TTITIVGNLTADPELRFTSSGAAVVNFTVASTP-----------E-WKDGEALFLRC 45 usage_00188.pdb 1 --DTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIQ-SGE------WKDGEALFLRC 51 usage_00189.pdb 1 -----ITIVGNLTADPELRFTSSGAAVVNFTVASTPKD--------------GEALFLRC 41 usage_00190.pdb 1 -----ITIVGNLTADPELRFTSSGAAVVNFTVASTPR----------E-WKDGEALFLRC 44 usage_00191.pdb 1 -----ITIVGNLTADPELRFTSSGAAVVNFTVASTPRIY---D------WKDGEALFLRC 46 usage_00277.pdb 1 HMFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKN----ASG--E--IEADYVNC 52 usage_00278.pdb 1 --FNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKN----ASG--E--IEADYVNC 50 VG L DP LR T GAAV A E C usage_00004.pdb 41 SVWRQAAENVAE-- 52 usage_00005.pdb 43 SVWRQAAENVAE-- 54 usage_00006.pdb 55 SVWRQAAENVAE-- 66 usage_00007.pdb 46 SVWRQAAENVAESL 59 usage_00110.pdb 50 NIWREAAENVAE-- 61 usage_00111.pdb 49 NIWREAAENVAES- 61 usage_00112.pdb 45 NIWREAAENVAE-- 56 usage_00113.pdb 42 NIWREAAENVAES- 54 usage_00114.pdb 45 NIWREAAENVAE-- 56 usage_00115.pdb 40 NIWREAAENVAE-- 51 usage_00116.pdb 38 NIWREAAENVAES- 50 usage_00117.pdb 40 NIWREAAENVAE-- 51 usage_00135.pdb 54 NIWREAAENVAE-- 65 usage_00136.pdb 52 NIWREAAENVAES- 64 usage_00137.pdb 51 NIWREAAENVAES- 63 usage_00181.pdb 54 NIWREAAENVAE-- 65 usage_00182.pdb 49 NIWREAAENVAE-- 60 usage_00187.pdb 46 NIWREAAENVAE-- 57 usage_00188.pdb 52 NIWREAAENVAE-- 63 usage_00189.pdb 42 NIWREAAENVAE-- 53 usage_00190.pdb 45 NIWREAAENVAE-- 56 usage_00191.pdb 47 NIWREAAENVAES- 59 usage_00277.pdb 53 TLWRKTAENTALY- 65 usage_00278.pdb 51 TLWRKTAENTALY- 63 WR AEN A #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################