################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:58 2021 # Report_file: c_1377_93.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00057.pdb # 2: usage_00802.pdb # 3: usage_01144.pdb # 4: usage_01377.pdb # # Length: 67 # Identity: 1/ 67 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 29/ 67 ( 43.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 38/ 67 ( 56.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00057.pdb 1 ------------PPVRLAELHADLKIQERDELAWKKLKLDG----LDEDGEKEARLIRNL 44 usage_00802.pdb 1 ------------PPVRLAELHADLKIQERDELAWKKLKLDG----LDEDGEKEARLIRNL 44 usage_01144.pdb 1 FAKMYLDPNTQSANALAMRKQILKGATTFLEKQFWNEVNSLIAKY--------------- 45 usage_01377.pdb 1 ------------PPVRLAELHADLKIQERDELAWKKLKLDG----LDEDGEKEARLIRNL 44 ppvrlaelhadlkiqerdElawkklkldg usage_00057.pdb 45 NVILAKY 51 usage_00802.pdb 45 NVILAKY 51 usage_01144.pdb ------- usage_01377.pdb 45 NVILAK- 50 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################