################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:02:02 2021 # Report_file: c_0248_15.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00019.pdb # 2: usage_00020.pdb # 3: usage_00021.pdb # 4: usage_00022.pdb # 5: usage_00023.pdb # 6: usage_00024.pdb # 7: usage_00025.pdb # 8: usage_00296.pdb # 9: usage_00297.pdb # 10: usage_00298.pdb # 11: usage_00299.pdb # 12: usage_00300.pdb # 13: usage_00301.pdb # 14: usage_00302.pdb # 15: usage_00303.pdb # 16: usage_00304.pdb # 17: usage_00445.pdb # 18: usage_00446.pdb # # Length: 133 # Identity: 109/133 ( 82.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 109/133 ( 82.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 6/133 ( 4.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00019.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00020.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00021.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00022.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00023.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00024.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00025.pdb 1 YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGL 60 usage_00296.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00297.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00298.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00299.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00300.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00301.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00302.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00303.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00304.pdb 1 YVVLAFVPLAFSFVSPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00445.pdb 1 YVVLAFVPLAFSFVCPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 60 usage_00446.pdb 1 --VLAFVPLAFSFVCPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGL 58 VLAF PLAF FV PTEI AFS AAKKFE QGAQVLFASTDSEYSLLAWTN PRK GGL usage_00019.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00020.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00021.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00022.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00023.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00024.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00025.pdb 61 GPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEAL 120 usage_00296.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00297.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00298.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00299.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00300.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00301.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00302.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00303.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00304.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00445.pdb 61 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 120 usage_00446.pdb 59 GPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEAL 118 GP PLLAD NHSLSRDYGVLIE EG ALRGLFIIDPKG IRHITINDL VGRNV EAL usage_00019.pdb 121 RLVEAFQWTDK-- 131 usage_00020.pdb 121 RLVEAFQWTDKNG 133 usage_00021.pdb 121 RLVEAFQWTDK-- 131 usage_00022.pdb 121 RLVEAFQWTDK-- 131 usage_00023.pdb 121 RLVEAFQWTDK-- 131 usage_00024.pdb 121 RLVEAFQWTDK-- 131 usage_00025.pdb 121 RLVEAFQWTDK-- 131 usage_00296.pdb 121 RLVEGFQWTDK-- 131 usage_00297.pdb 121 RLVEGFQWTDKNG 133 usage_00298.pdb 121 RLVEGFQWTDKNG 133 usage_00299.pdb 121 RLVEGFQWTDKNG 133 usage_00300.pdb 121 RLVEGFQWTDKN- 132 usage_00301.pdb 121 RLVEGFQWTDK-- 131 usage_00302.pdb 121 RLVEGFQWTDKN- 132 usage_00303.pdb 121 RLVEGFQWTDKNG 133 usage_00304.pdb 121 RLVEGFQWT---- 129 usage_00445.pdb 121 RLVEGFQWTDKN- 132 usage_00446.pdb 119 RLVEGFQWTDKN- 130 RLVE FQWT #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################