################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:17 2021 # Report_file: c_0007_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00002.pdb # 2: usage_00003.pdb # 3: usage_00009.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00015.pdb # 9: usage_00016.pdb # # Length: 239 # Identity: 180/239 ( 75.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 180/239 ( 75.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 8/239 ( 3.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00002.pdb 1 --TVKKLGSRIGAQVDGVSLGADLDAAAVDQIRAALLEHKVIFFRNQHHLDDQQQLQFAG 58 usage_00003.pdb 1 LITVKKLGSRIGAQVDGVSLGADLDAAAVDQIRAALLEHKVIFFRNQHHLDDQQQLQFAG 60 usage_00009.pdb 1 --TVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAG 58 usage_00010.pdb 1 --TVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAG 58 usage_00011.pdb 1 LITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAG 60 usage_00012.pdb 1 LITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAG 60 usage_00013.pdb 1 -ITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAG 59 usage_00015.pdb 1 -ITVTKLGSRIGARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDSRQLEFAR 59 usage_00016.pdb 1 -ITVTKLGSRIGARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDSRQLEFAR 59 TV KLGSRIGA DGV LG DLD A V IR ALL HKV FFR QH LDD QL FA usage_00002.pdb 59 LLGTPI-ANRWHTDVTFAANYPAASILRAVTLPNYGGSTLWANTATAYAELPEPLKCLVE 117 usage_00003.pdb 61 LLGTPIGHNRWHTDVTFAANYPAASILRAVTLPNYGGSTLWANTATAYAELPEPLKCLVE 120 usage_00009.pdb 59 LLGTPI--NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTE 116 usage_00010.pdb 59 LLGTPI-ANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTE 117 usage_00011.pdb 61 LLGTPI-ANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTE 119 usage_00012.pdb 61 LLGTPI--NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTE 118 usage_00013.pdb 60 LLGTPI-ANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTE 118 usage_00015.pdb 60 LLGTPIGATRWHTDVTFAANYPAASILRAVTLPSYGGSTLWASTVAAYQQLPEPLRHLTE 119 usage_00016.pdb 60 LLGTPI-ATRWHTDVTFAANYPAASILRAVTLPSYGGSTLWASTVAAYQQLPEPLRHLTE 118 LLGTPI RWHTDVTFAANYPAAS LRAV LP YGGSTLWA T AY LPEPL L E usage_00002.pdb 118 NLWALHTNRPDFRTEHPVVRVHPETGERTLLAGDFVRGFVGLDSQESSALFELLQRRITS 177 usage_00003.pdb 121 NLWALHTNRPDFRTEHPVVRVHPETGERTLLAGDFVRGFVGLDSQESSALFELLQRRITS 180 usage_00009.pdb 117 NLWALHTN--DFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM 174 usage_00010.pdb 118 NLWALHTNRPDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM 177 usage_00011.pdb 120 NLWALHTN-PDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM 178 usage_00012.pdb 119 NLWALHTN--DFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM 176 usage_00013.pdb 119 NLWALHTNRPDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM 178 usage_00015.pdb 120 NLWALHTNRPDFRTEHPVVRVHPETGERALLAGDFVRGFVGLDGHESSVLLELLQRRITM 179 usage_00016.pdb 119 NLWALHTNRPDFRTEHPVVRVHPETGERALLAGDFVRGFVGLDGHESSVLLELLQRRITM 178 NLWALHTN DFRTEHPVVRVHPETGER LLAGDFVR FVGLD ES L E LQRRIT usage_00002.pdb 178 PENTIRWNWESGDVAIWDNRATQHRAIDDYDDQHRLLHRVTLMGDVPVDVHGQRSRVIS 236 usage_00003.pdb 181 PENTIRWNWESGDVAIWDNRATQHRAIDDYDDQHRLLHRVTLMGDVPVDVHGQRSRVI- 238 usage_00009.pdb 175 PENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVI- 232 usage_00010.pdb 178 PENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVIS 236 usage_00011.pdb 179 PENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRV-- 235 usage_00012.pdb 177 PENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVIS 235 usage_00013.pdb 179 PENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVIS 237 usage_00015.pdb 180 PENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRITLMGDVPVNVHGERSRVIS 238 usage_00016.pdb 179 PENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRITLMGDVPVNVHGERSRVIS 237 PENT RW W GDVA WDNRATQHRAIDDYDDQ RL HR TLMGDVPV V G SRV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################