################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:59 2021 # Report_file: c_1254_12.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00035.pdb # 2: usage_00061.pdb # 3: usage_00420.pdb # 4: usage_00421.pdb # 5: usage_00422.pdb # 6: usage_00423.pdb # 7: usage_00424.pdb # 8: usage_00668.pdb # 9: usage_00702.pdb # 10: usage_00945.pdb # 11: usage_01119.pdb # # Length: 38 # Identity: 0/ 38 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 38 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 20/ 38 ( 52.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00035.pdb 1 RIVV--L-EYSFA-DALAALD---VKPVG-IA------ 24 usage_00061.pdb 1 RFGLLGAGRIGKV-HAKAVSGNADARLVAVA-D----A 32 usage_00420.pdb 1 RVAVVGYGNVGRY-ALEAVQAAPDMELVGVV-R----R 32 usage_00421.pdb 1 RVAVVGYGNVGRY-ALEAVQAAPDMELVGVV-R----R 32 usage_00422.pdb 1 RVAVVGYGNVGRY-ALEAVQAAPDMELVGVV-R----R 32 usage_00423.pdb 1 RVAVVGYGNVGRY-ALEAVQAAPDMELVGVV-R----R 32 usage_00424.pdb 1 RVAVVGYGNVGRY-ALEAVQAAPDMELVGVV-R----R 32 usage_00668.pdb 1 I-DTL-TTAETAR-AALDLYFQH-RPKKPIV-AVVYS- 32 usage_00702.pdb 1 -RAVVGNS-NAG-AD-AELIDAL-PKLEIVS-S----F 28 usage_00945.pdb 1 RYGVVSTAKVAPR-FIEGVRLAGNGEVVAVS-S----R 32 usage_01119.pdb 1 QLVIVGYGGMGSY-HVTLASAADNLEVHGVF-D----I 32 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################