################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:02:54 2021 # Report_file: c_0279_1.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00125.pdb # 2: usage_00293.pdb # 3: usage_00300.pdb # 4: usage_00301.pdb # 5: usage_00330.pdb # 6: usage_00351.pdb # 7: usage_00352.pdb # 8: usage_00353.pdb # 9: usage_00354.pdb # # Length: 127 # Identity: 43/127 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 117/127 ( 92.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 10/127 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00125.pdb 1 GLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFL 60 usage_00293.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00300.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00301.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00330.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00351.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00352.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00353.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 usage_00354.pdb 1 GVGIFFDSFDNDG-K-KNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRA 58 GvgIFfDsfdNDg k knnPaIviigNNGqihYDHqnDGasqaLAsCqrDFRNkpypvra usage_00125.pdb 61 AVRYSRGRLTVMTDL--EDK--NWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMK 116 usage_00293.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00300.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00301.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00330.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00351.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00352.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00353.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 usage_00354.pdb 59 KITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFL 118 kitYyqntLTVMinn tpd dyefCakvenmiiPaqghFGiSAaTGgLaDdHDvlSfl usage_00125.pdb 117 LFQLMVE 123 usage_00293.pdb 119 TFQ---- 121 usage_00300.pdb 119 TFQLTE- 124 usage_00301.pdb 119 TFQLTE- 124 usage_00330.pdb 119 TFQLTE- 124 usage_00351.pdb 119 TFQ---- 121 usage_00352.pdb 119 TFQ---- 121 usage_00353.pdb 119 TFQ---- 121 usage_00354.pdb 119 TFQ---- 121 tFQ #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################