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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:02:10 2021
# Report_file: c_0842_6.html
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#====================================
# Aligned_structures: 4
#   1: usage_00258.pdb
#   2: usage_00259.pdb
#   3: usage_00816.pdb
#   4: usage_00888.pdb
#
# Length:         74
# Identity:       47/ 74 ( 63.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     57/ 74 ( 77.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           17/ 74 ( 23.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00258.pdb         1  -LVPMLRVYNNTARYVDQGG-N-PGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFF   57
usage_00259.pdb         1  GLVPMLRVYNNTARYVDQ-----PGAFAIYLEPWHLDIFEFLDLKK---------RDLFF   46
usage_00816.pdb         1  --IPMIRVFNNTARYVDQGGNKRPGAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFP   58
usage_00888.pdb         1  -LVPMLRVYNNTARYVDQGG-N-PGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFF   57
                             vPMlRVyNNTARYVDQ     PGAFAiYLEPWHlDIFeFlDlkK         RDLFf

usage_00258.pdb        58  ALWIPDLFMKRVE-   70
usage_00259.pdb        47  ALWIPDLFMKRVET   60
usage_00816.pdb        59  ALWIPDLFMKRVE-   71
usage_00888.pdb        58  ALWIPDLFMKRVE-   70
                           ALWIPDLFMKRVE 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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