################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:57:29 2021 # Report_file: c_0963_24.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00133.pdb # 2: usage_00183.pdb # 3: usage_00448.pdb # 4: usage_00449.pdb # 5: usage_00476.pdb # 6: usage_00477.pdb # 7: usage_00522.pdb # 8: usage_00528.pdb # # Length: 54 # Identity: 1/ 54 ( 1.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 4/ 54 ( 7.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 54 ( 63.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00133.pdb 1 TF-LDVTGP-------KGTVRV----QVADQCHG---CE--------VGHLDLS 31 usage_00183.pdb 1 --DVVVKPCA-GSLDDRERLLPYTGQCVLSIDLA---AGERVD----------- 37 usage_00448.pdb 1 DE-VFLLLTLPDSS-ERLPVAG----KVIWTTPA---A---------A-GIGVQ 35 usage_00449.pdb 1 DE-VFLLLTLPDSS-ERLPVAG----KVIWTTPA---A----------AGIGVQ 35 usage_00476.pdb 1 DE-VFLLLTLPDSS-ERLPVAG----KVVWTTPN---R---------AAGIGVQ 36 usage_00477.pdb 1 DE-VFLLLTLPDSS-ERLPVAG----KVVWTTPAGANR---------AAGIGVQ 39 usage_00522.pdb 1 ---VFLLLTLPDSS-ERLPVAG----KVVWTTPA---------GANRAAGIGVQ 37 usage_00528.pdb 1 DE-VFLLLTLPDSS-ERLPVAG----KVIWTTPA---A----------AGIGVQ 35 v r v V #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################