################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:42:16 2021 # Report_file: c_1410_25.html ################################################################################################ #==================================== # Aligned_structures: 16 # 1: usage_00185.pdb # 2: usage_00187.pdb # 3: usage_00326.pdb # 4: usage_00327.pdb # 5: usage_00978.pdb # 6: usage_01056.pdb # 7: usage_01238.pdb # 8: usage_01258.pdb # 9: usage_01259.pdb # 10: usage_01445.pdb # 11: usage_01446.pdb # 12: usage_01447.pdb # 13: usage_01584.pdb # 14: usage_01587.pdb # 15: usage_01589.pdb # 16: usage_01590.pdb # # Length: 135 # Identity: 27/135 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/135 ( 20.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 64/135 ( 47.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00185.pdb 1 ---------------KPWLKR-L------KEVEASKKSYHTAR-----------KDE--- 24 usage_00187.pdb 1 FRESRAAEDGFRKAQKPWLKR-L------KEVEASKKSYHTAR-----------KDE--- 39 usage_00326.pdb 1 --------------QKPWAKKMKELEAAKKAYHLACKEEKLAM----------------- 29 usage_00327.pdb 1 --------------QKPWAKKMKELEAAKKAYHLACKEEKLAM----------------- 29 usage_00978.pdb 1 --------------QKPWAKKLKEVEAAKKAHHTACKEEKLAIS-----REANSKADPSL 41 usage_01056.pdb 1 ---------------KPWAKKLKEVEAAKKAYHAACKEEKLAIS-----RETNSKADPAL 40 usage_01238.pdb 1 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAIS-----REANSKADPSL 55 usage_01258.pdb 1 --------------QKPWAKKMKELEAAKKAYHLACKEEKLAM----------------- 29 usage_01259.pdb 1 ---------------KPWAKKMKELEAAKKAYHLACKEEKLAM----------------- 28 usage_01445.pdb 1 --------------QKPWAKKMKELEAAKKAYHLACKEERLAMT-----REMNSKTEQSV 41 usage_01446.pdb 1 ---------------KPWAKKMKELEAAKKAYHLACKEERLAMT-----REMNSKTEQSV 40 usage_01447.pdb 1 --------------QKPWAKKMKELEAAKKAYHLACKEER-------------------- 26 usage_01584.pdb 1 --------------QKPWAK-KKELEAAKKAYHLACKEEKLATRE-TEV----------- 33 usage_01587.pdb 1 ---------------KPWAK-KKELEAAKKAYHLACKEEKLATRENS------------V 32 usage_01589.pdb 1 FKETKEAEDGFRKAQKPWAKK-KELEAAKKAYHLACKEEKLATR------E-NSKTE--- 49 usage_01590.pdb 1 --------------QKPWAK-KKELEAAKKAYHLACKEEKLA------------------ 27 KPW K K K usage_00185.pdb 25 ---------------KTKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQAAERQRL 69 usage_00187.pdb 40 ---------------CTKEAEKMKTQYEQTLAELNRY-PRYMEDMEQAFESCQAAERQRL 83 usage_00326.pdb 30 ---------QDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRL 80 usage_00327.pdb 30 -------------DKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRL 76 usage_00978.pdb 42 NPEQLKK-LQDKIEKCKQDVLKTKDKYEKSLKELDQTTPQYMENMEQVFEQCQQFEEKRL 100 usage_01056.pdb 41 NPEQLKK-LQDKVERSKQDVLKTKAKYEKSLKELDNATPQYMENMEQVFEQCQQFEEKRL 99 usage_01238.pdb 56 NPEQLKK-LQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKRL 114 usage_01258.pdb 30 ---------QDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRL 80 usage_01259.pdb 29 -------------DKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRL 75 usage_01445.pdb 42 TPEQQKK-LVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRL 100 usage_01446.pdb 41 TPEQQKK-LVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRL 99 usage_01447.pdb 27 -----------D--KCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRL 73 usage_01584.pdb 34 ---PQKK-LQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQY-EN-EQVFEQCQQFEEKRL 87 usage_01587.pdb 33 TPEQQKK-LQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQY-EN-EQVFEQCQQFEEKRL 89 usage_01589.pdb 50 -PEQQKK-LQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQY-E-NEQVFEQCQQFEEKRL 105 usage_01590.pdb 28 -------QLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQY-EN-EQVFEQCQQFEEKRL 78 K YE L P Y E EQ FE CQ E RL usage_00185.pdb 70 LFFKDVLLTLHQHL- 83 usage_00187.pdb 84 LFFKDVLLTLHQHL- 97 usage_00326.pdb 81 VFLKEVLLDIKRH-- 93 usage_00327.pdb 77 VFLKEVLLDIKRHLN 91 usage_00978.pdb 101 RFFREVLLEVQKHLD 115 usage_01056.pdb 100 RFFREVLLEVQKHL- 113 usage_01238.pdb 115 RFFREVLLEVQKHLD 129 usage_01258.pdb 81 VFLKEVLLDIKRHL- 94 usage_01259.pdb 76 VFLKEVLLDIKRHL- 89 usage_01445.pdb 101 VFLKEVLLDIKRH-- 113 usage_01446.pdb 100 VFLKEVLLDIKRHLN 114 usage_01447.pdb 74 VFLKEVLLDIKRHL- 87 usage_01584.pdb 88 VFLKEVLLDIKRH-- 100 usage_01587.pdb 90 VFLKEVLLDIKRHLN 104 usage_01589.pdb 106 VFLKEVLLDIKRH-- 118 usage_01590.pdb 79 VFLKEVLLDIKRHLN 93 F VLL H #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################