################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:43:06 2021 # Report_file: c_1072_50.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00108.pdb # 2: usage_00257.pdb # 3: usage_00258.pdb # 4: usage_00276.pdb # 5: usage_00277.pdb # 6: usage_01002.pdb # 7: usage_01003.pdb # # Length: 62 # Identity: 10/ 62 ( 16.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 13/ 62 ( 21.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 9/ 62 ( 14.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00108.pdb 1 GHAAGDTVLVNIAMRIRGQLR-ESDLVARLGGDEFAVLLAPLASGADALRIADNIIASMQ 59 usage_00257.pdb 1 GLSGIDLLLGQLAGLMREQFGE-EADLARFGDSIFAALFKGK-TPEQAQAALQRLLKKVE 58 usage_00258.pdb 1 ----IDLLLGQLAGLMREQFGE-EADLARFGDSIFAALFKGK-TPEQAQAALQRLLKKVE 54 usage_00276.pdb 1 GHLEGDEALRQVAKAIRNSCSRPSDLPARYGGEEFAMVLPNT-SPGGARLLAEKLRQSVA 59 usage_00277.pdb 1 GHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGT-SPGGARLLAEKVRRTVE 59 usage_01002.pdb 1 -HVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGT-SPGGARLLAEKVRRTVE 58 usage_01003.pdb 1 GHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGT-SPGGARLLAEKVRRTVE 59 D L q A R AR G FA p A v usage_00108.pdb -- usage_00257.pdb 59 NH 60 usage_00258.pdb 55 NH 56 usage_00276.pdb 60 GM 61 usage_00277.pdb 60 S- 60 usage_01002.pdb 59 SL 60 usage_01003.pdb 60 SL 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################