################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:00:10 2021 # Report_file: c_1464_167.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00008.pdb # 2: usage_00171.pdb # 3: usage_00230.pdb # 4: usage_00422.pdb # 5: usage_00979.pdb # 6: usage_00999.pdb # 7: usage_01122.pdb # 8: usage_01434.pdb # # Length: 34 # Identity: 0/ 34 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 0/ 34 ( 0.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 30/ 34 ( 88.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00008.pdb 1 -PALAVAIK-----T--CK-NC--T--------S 15 usage_00171.pdb 1 TKR-ARVIM-----Y--NK-GK--VK-------- 15 usage_00230.pdb 1 ----PAMYV-----A--IQ-AV--L-S--LYAS- 16 usage_00422.pdb 1 -PALAVAIK-----T--CK-NC--T--------S 15 usage_00979.pdb 1 ---------CYVGVQ--TV-ED--LR---A---- 13 usage_00999.pdb 1 ---TAIIFC-----V--AL-SD------------ 11 usage_01122.pdb 1 -------VL-----L--TH-EI--M-CSRCCDK- 15 usage_01434.pdb 1 --G-VWKMC-----EKPCAE-WEN---------- 15 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################