################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:04:10 2021 # Report_file: c_0941_89.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00402.pdb # 2: usage_00786.pdb # 3: usage_00952.pdb # 4: usage_01259.pdb # 5: usage_01991.pdb # 6: usage_01992.pdb # 7: usage_01993.pdb # # Length: 71 # Identity: 0/ 71 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 71 ( 4.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 71 ( 59.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00402.pdb 1 R-----TSILRD--GITA-GKAALRIHN-VTASDSGKYLCYFQ-DGD--F------YEKA 42 usage_00786.pdb 1 R-----TIFDIT-----N--NLSIVILA-LRPSDEGTYECVVL-KYEKD---AFKREHLA 43 usage_00952.pdb 1 -MIYKGIYHLFY--Q-------W--NPKGAVWG--NIVWAHST-ST----DL----INWD 37 usage_01259.pdb 1 R-----IQLVTS-----TPHELSISISN-VALADEGEYTCSIFT--M--P------VRTA 39 usage_01991.pdb 1 R-----LQWNGSKD---L-QDVSITVLN-VTLNDSGLYTCNVS-REF--F--V---KTTR 42 usage_01992.pdb 1 R-----LQWNGSKD---L-QDVSITVLN-VTLNDSGLYTCNVS-REF--V------KTTR 41 usage_01993.pdb 1 R-----LQWNGSKD---L-QDVSITVLN-VTLNDSGLYTCNVS-REF--V------KTTR 41 g y c usage_00402.pdb 43 LVELKVLEHHH 53 usage_00786.pdb 44 EVTLSV----- 49 usage_00952.pdb 38 PHP-------- 40 usage_01259.pdb 40 KSLVTVLGI-- 48 usage_01991.pdb 43 LIPLRVHH--- 50 usage_01992.pdb 42 LIPLRVHH--- 49 usage_01993.pdb 42 LIPLRVHH--- 49 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################