################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:38:50 2021 # Report_file: c_0813_29.html ################################################################################################ #==================================== # Aligned_structures: 21 # 1: usage_00036.pdb # 2: usage_00040.pdb # 3: usage_00041.pdb # 4: usage_00060.pdb # 5: usage_00061.pdb # 6: usage_00062.pdb # 7: usage_00063.pdb # 8: usage_00064.pdb # 9: usage_00065.pdb # 10: usage_00066.pdb # 11: usage_00067.pdb # 12: usage_00068.pdb # 13: usage_00069.pdb # 14: usage_00070.pdb # 15: usage_00071.pdb # 16: usage_00144.pdb # 17: usage_00145.pdb # 18: usage_00148.pdb # 19: usage_00149.pdb # 20: usage_00294.pdb # 21: usage_00295.pdb # # Length: 91 # Identity: 17/ 91 ( 18.7%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 53/ 91 ( 58.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 91 ( 27.5%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00036.pdb 1 GLIGLVGEREEPINLADAPLHPAYKHRPE-LGEEDYHGFLGIPIIEQGELLGILVIQ-QL 58 usage_00040.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRV---SFGTLYLTDKT 55 usage_00041.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00060.pdb 1 GVLGALIEEPKPIRLDDISRHPASVGF--PLHHPPMRTFLGVPVRIRDEVFGNLYLTEKA 58 usage_00061.pdb 1 GVLGALIEEPKPIRLDDISRHPASVGF--PLHHPPMRTFLGVPVRIRDEVFGNLYLTEKA 58 usage_00062.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPP-RTFLGVPVRVRDESFGTLYLTDKT 57 usage_00063.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPP-RTFLGVPVRVRDESFGTLYLTDKT 57 usage_00064.pdb 1 -VIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 57 usage_00065.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00066.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00067.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00068.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00069.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00070.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00071.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00144.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00145.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00148.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00149.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 usage_00294.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVR----SFGTLYLTDKT 54 usage_00295.pdb 1 GVIGLLIEDPKPLRLDDVSAHPASIGF--PPYHPPMRTFLGVPVRVRDESFGTLYLTDKT 58 v G liE pkP rLdD s HPAs gf hpp rtFLGvPvr fG Lylt k usage_00036.pdb 59 ESHHFAEEEEAFCVTLAIHLAAEIAHARAKG 89 usage_00040.pdb 56 NGQPFSDDDEVLVQALAAAAGIAVANA---- 82 usage_00041.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANA---- 85 usage_00060.pdb 59 DGQPFSDDDEVLVQALAAAAGIAVDNAR--- 86 usage_00061.pdb 59 DGQPFSDDDEVLVQALAAAAGIAVDNA---- 85 usage_00062.pdb 58 NGQPFSDDDEVLVQALAAAAGIAVANARL-- 86 usage_00063.pdb 58 NGQPFSDDDEVLVQALAAAAGIAVANARLY- 87 usage_00064.pdb 58 NGQPFSDDDEVLVQALAAAAGIAVANA---- 84 usage_00065.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARLYQ 89 usage_00066.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANA---- 85 usage_00067.pdb 59 NGQPFSDDDEVLVQAL--------------- 74 usage_00068.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARLYQ 89 usage_00069.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARLYQ 89 usage_00070.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANAR--- 86 usage_00071.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANAR--- 86 usage_00144.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARLYQ 89 usage_00145.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARLYQ 89 usage_00148.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANA---- 85 usage_00149.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANARL-- 87 usage_00294.pdb 55 NGQPFSDDDEVLVQALAAAAGIAVANA---- 81 usage_00295.pdb 59 NGQPFSDDDEVLVQALAAAAGIAVANA---- 85 gqpFsdddEvlvqaL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################