################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:30:27 2021 # Report_file: c_0990_36.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00044.pdb # 2: usage_00141.pdb # 3: usage_00197.pdb # 4: usage_00198.pdb # 5: usage_00257.pdb # 6: usage_00373.pdb # # Length: 54 # Identity: 4/ 54 ( 7.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 10/ 54 ( 18.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 54 ( 38.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 -LVVKASGL---K-GVIVAKSKEEACKAVQEI---M-QE--------ETIVIEE 37 usage_00141.pdb 1 -VVVKDSGLAAGK-GVTVAFDLHQAKQAVANI---LNR-A-EG----GEVVVEE 43 usage_00197.pdb 1 PIVVKADGLAAGK-GAVVCETVEKAIETLDRF---LNKK--IFGKSSERVVIEE 48 usage_00198.pdb 1 PIVVKADGLAAGK-GAVVCETVEKAIETLDRF---LNKK--IFGKSSERVVIEE 48 usage_00257.pdb 1 -IVIKADGLAAGK-GVIVA-TQEEAETAVNDLAGNAFG--DAG----HRIVVEE 45 usage_00373.pdb 1 VVKLVEG-TQ--GIGVVLAETRQAAESVIDAF---RG-L--N----AHILVQEY 41 v k l k G v A V Ee #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################