################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:09:58 2021 # Report_file: c_0867_20.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00174.pdb # 2: usage_00175.pdb # 3: usage_00177.pdb # 4: usage_00178.pdb # 5: usage_00179.pdb # 6: usage_00180.pdb # 7: usage_00255.pdb # 8: usage_00259.pdb # 9: usage_00287.pdb # # Length: 70 # Identity: 12/ 70 ( 17.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 70 ( 25.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 19/ 70 ( 27.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00174.pdb 1 GNGGLYRALAAQ----------NIVED-EQRGICSIHVYCVDNILVKVADPRFIGFCIQK 49 usage_00175.pdb 1 GNGGLYRALAAQ----------NIVED-EQRGICSIHVYCVDNILVKVADPRFIGFCIQK 49 usage_00177.pdb 1 GNGGLYRALAAQ----------NIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQK 50 usage_00178.pdb 1 GNGGLYRALAAQ----------NIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQK 50 usage_00179.pdb 1 GNGGLYRALAAQ----------NIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQK 50 usage_00180.pdb 1 GNGGLYRALAAQ----------NIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQK 50 usage_00255.pdb 1 -----YQALLTS----------GVREDMRKRGIEHIHTYCVDNCLVKVADPVFIGFAASK 45 usage_00259.pdb 1 GNGAVFAALAAPRATKTLQVKESLLQHLRKLGIAYVQIGNIDNLLANVADPVFIGYAIEE 60 usage_00287.pdb 1 ----LFKALKDN----------GILEFMNEKGIKYSVAHNVDNILCKDVDPNMIGYMDLL 46 AL e GI vDN L kvaDP fIG usage_00174.pdb 50 GADCGAK--- 56 usage_00175.pdb 50 GADCGAK--- 56 usage_00177.pdb 51 GADCGAK--- 57 usage_00178.pdb 51 GADCGAK--- 57 usage_00179.pdb 51 GADCGAKV-- 58 usage_00180.pdb 51 GADCGAKV-- 58 usage_00255.pdb 46 QVDIATKVVR 55 usage_00259.pdb 61 EAHVVVKTCP 70 usage_00287.pdb 47 QSEICIK--- 53 K #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################