################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:08 2021 # Report_file: c_0673_185.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00007.pdb # 2: usage_00478.pdb # 3: usage_00771.pdb # 4: usage_00788.pdb # # Length: 94 # Identity: 3/ 94 ( 3.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 94 ( 42.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 53/ 94 ( 56.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 ILLGRTKEAFAT-----V-------------DGIPHIAFTDYEGASVVLRNP---NKK-G 38 usage_00478.pdb 1 -------EAFAT--P--V-------------DGIPHIAFTDYEGASVELRNPDGETEK-G 35 usage_00771.pdb 1 ------------------KESLAFNTTVTNAILGANFKSLDDKGEPLVPKDG------AA 36 usage_00788.pdb 1 ILLGRTKEAFATPVTGGV-------------DGIPHIAFTDYEGASVVLRNN----KK-G 42 dgiphiaftDyeGasvvlrn g usage_00007.pdb 39 LAYFVLPMKNAEGT-KVGSVKVNASYAGVLGRGG 71 usage_00478.pdb 36 LAYFVLPMKNAEGT-KVGSVKVN----------- 57 usage_00771.pdb 37 -VFTLYVNVPANT-PDGTYYVG------------ 56 usage_00788.pdb 43 LAYFVLPMKNAEGT-KVGSVKVN----------- 64 ayfvlpmknAeg kvgsvkv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################