################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:28:02 2021 # Report_file: c_0404_22.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00116.pdb # 2: usage_00161.pdb # 3: usage_00211.pdb # 4: usage_00325.pdb # 5: usage_00343.pdb # 6: usage_00344.pdb # # Length: 107 # Identity: 12/107 ( 11.2%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/107 ( 21.5%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 28/107 ( 26.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00116.pdb 1 ---------SLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD-QR--RFAEEAE 48 usage_00161.pdb 1 -------KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD-GL-KYRIQEFK 51 usage_00211.pdb 1 ---------PLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTST-LPGVQISF-S 49 usage_00325.pdb 1 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPD-SA--HKMLVRE 57 usage_00343.pdb 1 ---------ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD-GL-KYRIQEFK 49 usage_00344.pdb 1 ---------ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD-GL-KYRIQEFK 49 l V v G P P v W r g d usage_00116.pdb 49 GGLCRLRILAAERGDAGFYTCKAVNEYGARQCE-------------- 81 usage_00161.pdb 52 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPA----- 93 usage_00211.pdb 50 DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTA------------- 83 usage_00325.pdb 58 NGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS-------------- 90 usage_00343.pdb 50 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLP 96 usage_00344.pdb 50 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLP 96 G L I vt da Y AtN G #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################