################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:39:05 2021 # Report_file: c_0121_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00302.pdb # 2: usage_00303.pdb # 3: usage_00310.pdb # 4: usage_00507.pdb # 5: usage_00522.pdb # 6: usage_00523.pdb # 7: usage_00524.pdb # # Length: 124 # Identity: 72/124 ( 58.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 89/124 ( 71.8%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/124 ( 12.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00302.pdb 1 VQVQQSGTVVARPGASVKMSCKASGYTFTNYWMHWIKQRPGQ-GLEWIGAIYPGNSATFY 59 usage_00303.pdb 1 VQVQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRPGQ-GLEWIGAIYPGNSATFY 59 usage_00310.pdb 1 VNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQ-GLEWIGGIYPGNRDTRY 59 usage_00507.pdb 1 -QLQQSGTVLARPGASVKMSCKASGYSFTRYWMHWIKQRPGQ-GLEWIGAIYPGNSDTSY 58 usage_00522.pdb 1 VQVQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRP--GGLEWIGAIYPGNSATFY 58 usage_00523.pdb 1 VQVQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRPGQ-GLEWIGAIYPGNSATFY 59 usage_00524.pdb 1 VQVQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRPGQ-GLEWIGAIYPGNSATFY 59 q QQSGTVlARPGASVkMSCKASGY FT YWmHWIKQRP GLEWIGaIYPGNs T Y usage_00302.pdb 60 NHKFRAKTKLTAVTSTTTAYMELSSLTSEDSAVYYCTRGGH-------GYYGDYWGQGAS 112 usage_00303.pdb 60 NHKFRAKTKLTAVTSTITAYMELSSLTNEDSAVYYCTRGGH-------GYYGDYWGQGAS 112 usage_00310.pdb 60 TQRFKDKAKLTAVTSANTAYMELSSLTNEDSAVYYCSIIYFDYADFIM----DYWGQGTT 115 usage_00507.pdb 59 NQKFEGKAKLTAVTSASTAYMELSSLTHEDSAVYYCSRDYG-------YYFDFWGQGTTL 111 usage_00522.pdb 59 NHKFRAKTKLTAVTSTITAYMELSSLTNEDSAVYYCTRGGH-------GYYGDYWGQGAS 111 usage_00523.pdb 60 NHKFRAKTKLTAVTSTITAYMELSSLTNEDSAVYYCTRGGH-------GYYGDYWGQGAS 112 usage_00524.pdb 60 NHKFRAKTKLTAVTSTITAYMELSSLTNEDSAVYYCTRGGH-------GYYGDYWGQGAS 112 n kF K KLTAVTS TAYMELSSLT EDSAVYYC r dywgqg usage_00302.pdb 113 LTVS 116 usage_00303.pdb 113 LTVS 116 usage_00310.pdb 116 VTVS 119 usage_00507.pdb 112 TVS- 114 usage_00522.pdb 112 LTVS 115 usage_00523.pdb 113 LTVS 116 usage_00524.pdb 113 LTVS 116 tv #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################