################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:21 2021 # Report_file: c_1422_151.html ################################################################################################ #==================================== # Aligned_structures: 3 # 1: usage_00006.pdb # 2: usage_00133.pdb # 3: usage_00766.pdb # # Length: 79 # Identity: 9/ 79 ( 11.4%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 40/ 79 ( 50.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 79 ( 29.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00006.pdb 1 TPKHLHSLN-----LLSS-GGSDEHDINFLMKMALDKIAFIPFSYLVDQWRWRVFDGS-I 53 usage_00133.pdb 1 TWPWMKLFFEEDAD-------------KYYFSHLSSALLFLPYGVSVDEYQHYVYENPE- 46 usage_00766.pdb 1 TPEHLHKIG-----LLDRVTNDTESDINYLLKMALEKIAFLPFGYLVDQWRWGVFSGR-T 54 Tp hlh nyl kmal kiaFlPfgylVDqwrw Vf g usage_00006.pdb 54 TK-ENYNQEWWSLRLKYQG 71 usage_00133.pdb 47 ASPEERKTAWRNIEKKY-- 63 usage_00766.pdb 55 PP-SRYNFDWWYLRTKYQG 72 e yn Ww lr KY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################