################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:32:48 2021 # Report_file: c_0550_2.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00033.pdb # 2: usage_00034.pdb # 3: usage_00096.pdb # 4: usage_00145.pdb # 5: usage_00199.pdb # 6: usage_00200.pdb # 7: usage_00248.pdb # 8: usage_00398.pdb # 9: usage_00403.pdb # 10: usage_00414.pdb # 11: usage_00446.pdb # # Length: 209 # Identity: 43/209 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 92/209 ( 44.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 74/209 ( 35.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00033.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSS--PW----IQVY--- 51 usage_00034.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSS--PW----IQVY--- 51 usage_00096.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSS--PWIPII-----DY 53 usage_00145.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSS--PWIPII-----DY 53 usage_00199.pdb 1 --------------------------QQFLNLMEKLNENIEILSS--PW----IQVY--- 25 usage_00200.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSS--PW----IQVY--- 51 usage_00248.pdb 1 PTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENVELLG---TP---WLQVY--- 51 usage_00398.pdb 1 PTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENVELLG---TP----------- 46 usage_00403.pdb 1 -------------------------DPRFLRLLDLAQEGLKEESGFLRE----VLNAVPV 31 usage_00414.pdb 1 PTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSS--PWIPII-----DY 53 usage_00446.pdb 1 --------------------------QQFLNLMEKLNENIRIVST--PW----IQIC--- 25 FL Lme l En usage_00033.pdb 52 --NNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 109 usage_00034.pdb 52 --NNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 109 usage_00096.pdb 54 -----------FPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 102 usage_00145.pdb 54 -----------FPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 102 usage_00199.pdb 26 --NNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 83 usage_00200.pdb 52 --NNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 109 usage_00248.pdb 52 --NNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQE 109 usage_00398.pdb 47 --------LDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQE 98 usage_00403.pdb 32 DRHIP----ALAGKVLRFQKAFLTQLDELLTEHRMTWDP---AQPPRDLTEAFLAEMEKA 84 usage_00414.pdb 54 -----------FPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKE 102 usage_00446.pdb 26 --NNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKE 83 fpg h llkn i Ekvkehq nnP DfidcFL kME e usage_00033.pdb 110 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 169 usage_00034.pdb 110 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 169 usage_00096.pdb 103 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 162 usage_00145.pdb 103 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 162 usage_00199.pdb 84 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 143 usage_00200.pdb 110 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 169 usage_00248.pdb 110 N-N--LEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRH 166 usage_00398.pdb 99 N-N--LEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRH 155 usage_00403.pdb 85 KGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV 144 usage_00414.pdb 103 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 162 usage_00446.pdb 84 KQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRN 143 N eFt E L DLfgAGteTTSTTLry LLLllkHPeV a VQeEIerViGr usage_00033.pdb 170 RSPCMQDRSHMP----------------- 181 usage_00034.pdb 170 RSPCMQDRSHMP----------------- 181 usage_00096.pdb 163 RSPCMQDRSHMPYTDAVVHEVQRYIDLLP 191 usage_00145.pdb 163 RSPCMQDRSHMPYTDAVVHEVQRYIDLLP 191 usage_00199.pdb 144 RSPCMQDRSHMPYTDAVVHEVQRYIDLLP 172 usage_00200.pdb 170 RSPCMQDRSHMPYTDAVVHEVQRYIDLLP 198 usage_00248.pdb 167 RSPCMQDRSRMPYTDAVIHEIQR------ 189 usage_00398.pdb 156 RSPCMQDRSRMP----------------- 167 usage_00403.pdb 145 RRPEMGDQAHMPYTTAVIHEVQRFGD--- 170 usage_00414.pdb 163 RSPCMQDRSHMPYTDAVVHEVQRYIDLLP 191 usage_00446.pdb 144 RSPCMQDRGHMPYTDAVVHEVQRYIDLIP 172 RsPcMqDr MP #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################