################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:26:46 2021 # Report_file: c_0928_36.html ################################################################################################ #==================================== # Aligned_structures: 15 # 1: usage_00113.pdb # 2: usage_00114.pdb # 3: usage_00115.pdb # 4: usage_00134.pdb # 5: usage_00172.pdb # 6: usage_00173.pdb # 7: usage_00175.pdb # 8: usage_00176.pdb # 9: usage_00187.pdb # 10: usage_00247.pdb # 11: usage_00248.pdb # 12: usage_00251.pdb # 13: usage_00252.pdb # 14: usage_00691.pdb # 15: usage_00692.pdb # # Length: 36 # Identity: 5/ 36 ( 13.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 36 ( 50.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 36 ( 36.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00113.pdb 1 GKVVLLNRAPTLHRLGIQAFQP---VLVEGQSIQLH 33 usage_00114.pdb 1 GKVVLLNRAPTLHRLGIQAFQP---VLVEGQSIQLH 33 usage_00115.pdb 1 -GSDGCPR-------CGQAVYAAEKVIGAG-KSWH- 26 usage_00134.pdb 1 GKVVLLNRAPTLHRLGIQAFQP---VLVEGQSIQLH 33 usage_00172.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00173.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00175.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00176.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00187.pdb 1 EHPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 33 usage_00247.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00248.pdb 1 EHPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 33 usage_00251.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00252.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00691.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 usage_00692.pdb 1 -HPVLLNRAPTLHRLGIQAFEP---VLIEGKAIQLH 32 vllnR giQAf p Vl eG iql #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################