################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:08:26 2021 # Report_file: c_1489_265.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00376.pdb # 2: usage_00631.pdb # 3: usage_00815.pdb # 4: usage_02229.pdb # 5: usage_02635.pdb # 6: usage_02764.pdb # 7: usage_02765.pdb # 8: usage_03431.pdb # 9: usage_03821.pdb # # Length: 65 # Identity: 1/ 65 ( 1.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 3/ 65 ( 4.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 42/ 65 ( 64.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00376.pdb 1 D--ERY----QRAHDDMLNAIERVIADG-SVTPDMG----GTLSTQQVGAAISDTLARL- 48 usage_00631.pdb 1 ---RY-----NNAAKSLRDAIYSVYSEGKYLTPDVG----GSSTTDEMISAIRSKI---- 44 usage_00815.pdb 1 -----------DAAADIYTAVDKVLTEGKVLTPDLG----GKSGTNEITDAVLANI---- 41 usage_02229.pdb 1 PFT--VRTRVSEGLVLAEPAKL-ISTDG-S------------A-STADLTRATTTWNQQ- 42 usage_02635.pdb 1 ----------KEAAKRVEKAVDLVLERG-PMTPDLG----GDATTEAFTEAVVEALKSL- 44 usage_02764.pdb 1 -----------EAAKRVEKAVDLVLERG-PRTPDLG----GDATTEAFTEAVVEALKSL- 43 usage_02765.pdb 1 ----------KEAAKRVEKAVDLVLERG-PRTPDLG----GDATTEAFTEAVVEALKSL- 44 usage_03431.pdb 1 ----------EKAAKRIEDAVLVALNNG-FRTGDIYSAGTKLVGCKEMGEEVLKSVDS-- 47 usage_03821.pdb 1 K--FEN----MGAQMVKEVASKANDA-A-G-------------------DGTTTATVLAQ 33 a A g usage_00376.pdb ----- usage_00631.pdb ----- usage_00815.pdb ----- usage_02229.pdb ----- usage_02635.pdb ----- usage_02764.pdb ----- usage_02765.pdb ----- usage_03431.pdb ----- usage_03821.pdb 34 AIITE 38 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################