################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:06:40 2021 # Report_file: c_1200_433.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_01027.pdb # 2: usage_01612.pdb # 3: usage_01648.pdb # 4: usage_01740.pdb # 5: usage_03765.pdb # 6: usage_04531.pdb # 7: usage_04959.pdb # 8: usage_04971.pdb # # Length: 60 # Identity: 0/ 60 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 60 ( 3.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 52/ 60 ( 86.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01027.pdb 1 --TCIN-QM------------PCVSLGEPVERGDV-LADGP-----STDL---------- 29 usage_01612.pdb 1 ---DSINII------------T------------K-ETIKFVADGDIGSGSVII------ 26 usage_01648.pdb 1 -DSINI-MI------------T------------K-ETIKFVADGDIGSGSVIIKP---- 29 usage_01740.pdb 1 ---------VTVQSLLTVETLE------------HNQTYECRAHNSVGSGSWAFIP---- 35 usage_03765.pdb 1 RLFSVM-VT---------------------------S-KPLFIAD-IGIGVG-------- 22 usage_04531.pdb 1 -DSINI-MI------------T------------K-ETIKFVADGDIGSGSVIIKPFVDM 33 usage_04959.pdb 1 -DAVVI-SC------------A------------K-DGVKFSASGELGNGNIKL------ 27 usage_04971.pdb 1 -DAVVI-SC------------A------------K-DGVKFSASGELGNGNIKL------ 27 g g #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################