################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Sun Jan 24 08:57:20 2021 # Report_file: c_0669_210.html ################################################################################################ #==================================== # Aligned_structures: 6 # 1: usage_00229.pdb # 2: usage_00232.pdb # 3: usage_00263.pdb # 4: usage_00264.pdb # 5: usage_00921.pdb # 6: usage_01107.pdb # # Length: 99 # Identity: 6/ 99 ( 6.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 99 ( 16.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 25/ 99 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00229.pdb 1 --SASYYYGQLKDIYRQHYLGLLHTLPLGEGLSLRSDLRYFDSGEDG--AA--------- 47 usage_00232.pdb 1 NLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDG--SS--------- 49 usage_00263.pdb 1 RTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDG--AA--------- 48 usage_00264.pdb 1 RTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDG--AA--------- 48 usage_00921.pdb 1 --SASYYYGQLKDIYRQHYLGLLHTLPLGEGLSLRSDLRYFDSGEDG--AA--------- 47 usage_01107.pdb 1 -LNASYYGLDSKNALERHYANVNFKQPLANDSSLTYDFSGYHTKFDANAHTYSATGTVAP 59 g l y q Y l h L Dg usage_00229.pdb 48 ---I----SGPVDNRNLNAMLTLRAGAHAFGIGVQKMIG 79 usage_00232.pdb 50 --------NVDN--KALNAMFTYSLGYHAFGVGYQKMS- 77 usage_00263.pdb 49 ---R----AGEIDSHTVYGLFSAGIGLHTFYLGLQKVGG 80 usage_00264.pdb 49 ---R----AGEIDSHTVYGLFSAGIGLHTFYLGLQKVGG 80 usage_00921.pdb 48 ---I----SGPVDNRNLNAMLTLRAGAHAFGIGVQKMIG 79 usage_01107.pdb 60 NYAADGIAGEEKTNNIWAISGTYATGPHSVMLAYQQNTG 98 G H f g Qk #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################