################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:19:30 2021 # Report_file: c_0787_101.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00482.pdb # 2: usage_00863.pdb # 3: usage_01064.pdb # 4: usage_01130.pdb # 5: usage_01131.pdb # # Length: 71 # Identity: 2/ 71 ( 2.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/ 71 ( 38.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 71 ( 29.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00482.pdb 1 -ARIV-FGT---------GSSVGVAEEIRRLGLSRALVLSTP----HQKGDAEALAARLG 45 usage_00863.pdb 1 -ELYAVKVLGASGSGSVSSIAQGLEWAGNNG-M--HVANLSLGSPSP-SATLEQAVNSAT 55 usage_01064.pdb 1 -ARIV-FSA---------GSSADVAEEIRRLGLSRALVLSTP----QQKGDAEALASRLG 45 usage_01130.pdb 1 AARVV-FGA---------GSSSQVAAEVERLGAKRALVLCTP----NQQAEAERIADLLG 46 usage_01131.pdb 1 AARVV-FGA---------GSSSQVAAEVERLGAKRALVLCTP----NQQAEAERIADLLG 46 ar v f gss va e rl alvl tp aE a lg usage_00482.pdb 46 PLAAGVFSD-- 54 usage_00863.pdb 56 SRGVLVVAA-- 64 usage_01064.pdb 46 RLAAGVFSE-- 54 usage_01130.pdb 47 PLSAGVYAG-- 55 usage_01131.pdb 47 PLSAGVYAGAV 57 l agV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################