################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:10:13 2021 # Report_file: c_0016_1.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00018.pdb # 2: usage_00019.pdb # 3: usage_00025.pdb # 4: usage_00026.pdb # 5: usage_00027.pdb # # Length: 304 # Identity: 273/304 ( 89.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 280/304 ( 92.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 24/304 ( 7.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00018.pdb 1 TEEMRK----AMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA 56 usage_00019.pdb 1 TEEMRK----AMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA 56 usage_00025.pdb 1 ------TEERKAAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGT-GNQVS-IA 52 usage_00026.pdb 1 TEEMRK----AMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA 56 usage_00027.pdb 1 TEEMRK----AMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA 56 amAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGT GNQVS mA usage_00018.pdb 57 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPR 116 usage_00019.pdb 57 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPR 116 usage_00025.pdb 53 HTQRGDEVILEADSHIFWYEVGAA-VLSG-VPHPVPGKNGA-DPDDVRKAIRPRNIHFPR 109 usage_00026.pdb 57 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPR 116 usage_00027.pdb 57 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPR 116 HTQRGDEVILEADSHIFWYEVGAm VLSG mPHPVPGKNGA DPDDVRKAIRPRNIHFPR usage_00018.pdb 117 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 176 usage_00019.pdb 117 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 176 usage_00025.pdb 110 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 169 usage_00026.pdb 117 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 176 usage_00027.pdb 117 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 176 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG usage_00018.pdb 177 YADSVMFCLSGLCAPVGSVVVGDRDFIERARKARKMLGGG--MRQAGVLAAAGIIALTKM 234 usage_00019.pdb 177 YADSVMFCLSGLCAPVGSVVVGDRDFIERARKARKMLGGG--MRQAGVLAAAGIIALTKM 234 usage_00025.pdb 170 YADSV-FCLSGLCAPVGSVVVGDRDFIERARKARKL----GGGRQAGVLAAAGIIALTK- 223 usage_00026.pdb 177 YADSVMFCLSGLCAPVGSVVVGDRDFIERARKARKMLGGG--MRQAGVLAAAGIIALTKM 234 usage_00027.pdb 177 YADSVMFCLSGLCAPVGSVVVGDRDFIERARKARKMLGGG--MRQAGVLAAAGIIALTKM 234 YADSV FCLSGLCAPVGSVVVGDRDFIERARKARKm mRQAGVLAAAGIIALTK usage_00018.pdb 235 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLA 294 usage_00019.pdb 235 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLA 294 usage_00025.pdb 224 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTN-VILRTDNLKVNAHGFIEALRNSGVLA 282 usage_00026.pdb 235 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLA 294 usage_00027.pdb 235 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLA 294 VDRLKEDHENARFLALKLKEIGYSVNPEDVKTN VILRTDNLKVNAHGFIEALRNSGVLA usage_00018.pdb 295 NAVS 298 usage_00019.pdb 295 NAVS 298 usage_00025.pdb 283 NAVS 286 usage_00026.pdb 295 NAVS 298 usage_00027.pdb 295 NAVS 298 NAVS #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################