################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 02:31:06 2021 # Report_file: c_1223_67.html ################################################################################################ #==================================== # Aligned_structures: 20 # 1: usage_00079.pdb # 2: usage_00080.pdb # 3: usage_00233.pdb # 4: usage_00234.pdb # 5: usage_00254.pdb # 6: usage_00368.pdb # 7: usage_00404.pdb # 8: usage_00408.pdb # 9: usage_00409.pdb # 10: usage_00560.pdb # 11: usage_00614.pdb # 12: usage_00615.pdb # 13: usage_00619.pdb # 14: usage_00620.pdb # 15: usage_00650.pdb # 16: usage_00651.pdb # 17: usage_01068.pdb # 18: usage_01190.pdb # 19: usage_01247.pdb # 20: usage_01248.pdb # # Length: 44 # Identity: 1/ 44 ( 2.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 8/ 44 ( 18.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 23/ 44 ( 52.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00079.pdb 1 DYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKA-------- 36 usage_00080.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASE---------- 33 usage_00233.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDR 43 usage_00234.pdb 1 -YLILDAVNNQVYVNPTNEVIDKM-------------------- 23 usage_00254.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDR 43 usage_00368.pdb 1 -FEIISNATNEAY--HNKAKAVELLSLQLT-------------- 27 usage_00404.pdb 1 -MIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLR-- 41 usage_00408.pdb 1 -YLILDAVNNQVYVNPTNEVIDKRAVQEQVASEKAELAKLK--- 40 usage_00409.pdb 1 -YLILDAVNNQVYVNPTNEVIDKRAVQEQVASEKAELAKLK--- 40 usage_00560.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00614.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00615.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00619.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00620.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00650.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_00651.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELA----- 38 usage_01068.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASE---------- 33 usage_01190.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVASE---------- 33 usage_01247.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVAS----------- 32 usage_01248.pdb 1 -YLILDAVNNQVYVNPTNEVIDKMRAVQEQVAS----------- 32 I d nn vy pt #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################