################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:42 2021 # Report_file: c_0615_10.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00044.pdb # 2: usage_00080.pdb # 3: usage_00081.pdb # 4: usage_00082.pdb # 5: usage_00083.pdb # 6: usage_00084.pdb # 7: usage_00158.pdb # # Length: 139 # Identity: 24/139 ( 17.3%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 60/139 ( 43.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 43/139 ( 30.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00044.pdb 1 -----------LVGSFNVLRLAAER-IAKTEPVNAEERGVIINTASVADGQIG------- 41 usage_00080.pdb 1 LEDWELVLRVNLTGSFLVAKAASEA-R-EK-----N-PGSIVLTASRV-----Y-LGNLG 46 usage_00081.pdb 1 LEDWELVLRVNLTGSFLVAKAASEA-R-EK-----N-PGSIVLTASRV-----Y-LGNLG 46 usage_00082.pdb 1 LEDWELVLRVNLTGSFLVAKAASEA-R-EK-----N-PGSIVLTASRV-----Y-LGNLG 46 usage_00083.pdb 1 LEDWELVLRVNLTGSFLVAKAASEA-R-EK-----N-PGSIVLTASRV-----Y-LGNLG 46 usage_00084.pdb 1 LEDWELVLRVNLTGSFLVAKAASEA-R-EK-----N-PGSIVLTASRV-----Y-LGNLG 46 usage_00158.pdb 1 PADWDAVLNVNLKGVAYSIKPFIEGMY-ER-----K-AGSIVAISSIS-----GERGNVG 48 L Gsf v k a E e GsIv taS usage_00044.pdb 42 QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLL----PEEARASLGKQVPH 97 usage_00080.pdb 47 QANYAAS-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRT--AKVPEKVREKAIAAT-P 102 usage_00081.pdb 47 QANYAAS-AGVVGLTRTLALELGRWGIRVNTLAPGFIET------P-EKVREKAIAAT-P 97 usage_00082.pdb 47 QANYAAS-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRT--AKVPEKVREKAIAAT-P 102 usage_00083.pdb 47 QANYAAS-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRT--AKVPEKVREKAIAAT-P 102 usage_00084.pdb 47 QANYAAS-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRT--AKVPEKVREKAIAAT-P 102 usage_00158.pdb 49 QTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEM-TLAIREDIREKITKEI-P 106 QanY As aGVvG t lA el r giRvnt APGfi T E Rek p usage_00044.pdb 98 PSRLGNPDEYGALAVHIIE 116 usage_00080.pdb 103 LGRAGKPLEVAYAALFLL- 120 usage_00081.pdb 98 LGRAGKPLEVAYAALFL-- 114 usage_00082.pdb 103 LGRAGKPLEVAYAALFL-- 119 usage_00083.pdb 103 LGRAGKPLEVAYAALFL-- 119 usage_00084.pdb 103 LGRAGKPLEVAYAALFLL- 120 usage_00158.pdb 107 FRRFGKPEEIAWAVAFLL- 124 R GkP E a aa fl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################