################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:44:04 2021 # Report_file: c_1343_21.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00342.pdb # 2: usage_00362.pdb # 3: usage_00364.pdb # 4: usage_00434.pdb # 5: usage_00580.pdb # 6: usage_00607.pdb # 7: usage_00608.pdb # # Length: 63 # Identity: 12/ 63 ( 19.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 63 ( 33.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 18/ 63 ( 28.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00342.pdb 1 GQGVANAVGFA-AAKKAQ-NLLGS-------DLIDHKIYCLCGDGDLQEGISYEACSLAG 51 usage_00362.pdb 1 GQGVANAVGFA-AAKKAQ-NLLGS-------DLIDHKIYCLCGDGDLQEGISYEACSLAG 51 usage_00364.pdb 1 GQGVANAVGFA-AAKKAQ-NLLGS-------DLIDHKIYCLCGDGDLQEGISYEACSLAG 51 usage_00434.pdb 1 --GLGAACGMAYTGKYFDK--------------ASYRVYCLLGDGELSEGSVWEAMAFAS 44 usage_00580.pdb 1 -QGVANAVGFA-AAKKAQ-NLLGS-------DLIDHKIYCLCGDGDLQEGISYEACSLAG 50 usage_00607.pdb 1 -QGLASAVGMAMASRYER-GLFD-PDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAA 57 usage_00608.pdb 1 GQGLASAVGMAMASRYER-GLFD-PDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAA 58 G a AvG A a dh iY DGd EG EA slA usage_00342.pdb 52 LHK 54 usage_00362.pdb 52 LHK 54 usage_00364.pdb 52 LHK 54 usage_00434.pdb 45 IYK 47 usage_00580.pdb 51 LHK 53 usage_00607.pdb 58 VQQ 60 usage_00608.pdb 59 VQQ 61 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################