################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 07:30:29 2021 # Report_file: c_0145_22.html ################################################################################################ #==================================== # Aligned_structures: 53 # 1: usage_00007.pdb # 2: usage_00050.pdb # 3: usage_00062.pdb # 4: usage_00066.pdb # 5: usage_00092.pdb # 6: usage_00093.pdb # 7: usage_00094.pdb # 8: usage_00099.pdb # 9: usage_00100.pdb # 10: usage_00139.pdb # 11: usage_00140.pdb # 12: usage_00142.pdb # 13: usage_00143.pdb # 14: usage_00151.pdb # 15: usage_00152.pdb # 16: usage_00156.pdb # 17: usage_00157.pdb # 18: usage_00176.pdb # 19: usage_00183.pdb # 20: usage_00246.pdb # 21: usage_00247.pdb # 22: usage_00248.pdb # 23: usage_00259.pdb # 24: usage_00267.pdb # 25: usage_00268.pdb # 26: usage_00270.pdb # 27: usage_00294.pdb # 28: usage_00308.pdb # 29: usage_00312.pdb # 30: usage_00318.pdb # 31: usage_00329.pdb # 32: usage_00330.pdb # 33: usage_00331.pdb # 34: usage_00332.pdb # 35: usage_00349.pdb # 36: usage_00411.pdb # 37: usage_00420.pdb # 38: usage_00437.pdb # 39: usage_00438.pdb # 40: usage_00439.pdb # 41: usage_00440.pdb # 42: usage_00470.pdb # 43: usage_00508.pdb # 44: usage_00520.pdb # 45: usage_00523.pdb # 46: usage_00532.pdb # 47: usage_00536.pdb # 48: usage_00542.pdb # 49: usage_00555.pdb # 50: usage_00558.pdb # 51: usage_00565.pdb # 52: usage_00566.pdb # 53: usage_00580.pdb # # Length: 155 # Identity: 18/155 ( 11.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 27/155 ( 17.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 61/155 ( 39.4%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNIS--SYSIHWVRQAP-GKGLEWVASISSY-Y- 53 usage_00050.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNFS--SSSIHWVRQAP-GKGLEWVASISSY-Y- 53 usage_00062.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNLY--YYSIHWVRQAP-GKGLEWVASISPY-S- 53 usage_00066.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFNLY--YYSIHWVRQAP-GKGLEWVASISPY-S- 53 usage_00092.pdb 1 --QLVETGGGVVQPGRSLRLSCTASGFTFR--DYWMSWVRQAP-GKGLEWVADINPD-G- 53 usage_00093.pdb 1 --QLVETGGGVVQPGRSLRLSCTASGFTFR--DYWMSWVRQAP-GKGLEWVADINPD-G- 53 usage_00094.pdb 1 --QLVETGGGVVQPGRSLRLSCTASGFTFR--DYWMSWVRQAP-GKGLEWVADIHQD-G- 53 usage_00099.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--AYGMGWVRQAP-GKGLEWVSSIGSS-G- 54 usage_00100.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--AYGMGWVRQAP-GKGLEWVSSIGSS-G- 54 usage_00139.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTLG--SRYMSWVRQAP-GEGFEWVSSIEPS-G- 54 usage_00140.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFTFT--DYTMDWVRQAP-GKGLEWVADVNPN-S- 54 usage_00142.pdb 1 QVQLQQSGGGLVQPGGSLKLSCAASGIDFS--RYWMSWVRRAP-GKGLEWIGEINPD-S- 55 usage_00143.pdb 1 -VQLQQSGGGLVQPGGSLKLSCAASGIDFS--RYWMSWVRRAP-GKGLEWIGEINPD-S- 54 usage_00151.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAP-GKGLEWVSAISGS-G- 54 usage_00152.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAP-GKGLEWVSAISGS-G- 54 usage_00156.pdb 1 -VQLVQSGGGVVQPGKSLRLSCAASGFAFS--SYAMHWVRQAP-GKGLEWVAVISYD-G- 54 usage_00157.pdb 1 -VQLVQSGGGVVQPGKSLRLSCAASGFAFS--SYAMHWVRQAP-GKGLEWVAVISYD-G- 54 usage_00176.pdb 1 -VQLVESGGGVVQPGRSLRLSCAASGFSFS--HYAMHWVRQAP-GKGLEWVAVISYD-G- 54 usage_00183.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGFDIY--DDDIHWVRQAP-GKGLEWVAYIAPS-Y- 54 usage_00246.pdb 1 -VQLVESGGGLVQPGGSLRLSCAASGYTFT--SYVIHWVRQAP-GKGLEWVGYNNPY-N- 54 usage_00247.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGYTFT--SYVIHWVRQAP-GKGLEWVGYNNPY-N- 55 usage_00248.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGYTFT--SYVIHWVRQAP-GKGLEWVGYNNPY-N- 55 usage_00259.pdb 1 --QLVESGGGLVKAGGSLILSCGVSNFRIS--AHTMNWVRRVP-GGGLEWVASISTS-S- 53 usage_00267.pdb 1 QVQLVESGGGVVQPGRSLRLSCAASGFTFS--TYAMHWVRQAP-GKGLEWVAVISYD-A- 55 usage_00268.pdb 1 --QLVESGGGVVQPGRSLRLSCAASGFTFS--TYAMHWVRQAP-GKGLEWVAVISYD-A- 53 usage_00270.pdb 1 -VQLVESGGGLVQPGRSLRLSCAASGFTFD--DYAMHWVRQAP-GKGLEWVSAITWN-S- 54 usage_00294.pdb 1 -VQLVESGGGVVQPGRSLRLSCAASGFTFS--SYGMHWVRQAP-GKGLEWVAVISYD-G- 54 usage_00308.pdb 1 -VTLDESGGGLQTPGGALSLVCKASGFTFS--SYAMGWVRQAP-GKGLEWVAGISDD-G- 54 usage_00312.pdb 1 -VQLVESGGGSVQAGGSLRLSCAVSGST-Y-SPCTTGWVRQAPG--GLEWVSSISSP--- 52 usage_00318.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--IYPMFWVRQAP-GKGLEWVSWIGPS-G- 54 usage_00329.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASG------HYIMMWVRQAP-GKGLEWVSGIY-G--- 48 usage_00330.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFT--NYYMHWVRQAP-GKGLEWVSTIAYD-G- 53 usage_00331.pdb 1 --QLKESGGRLVAPGTPLTLTCTVSGFDIS--DYAMIWVRQAP-GKGLEWIGIIYGV-I- 53 usage_00332.pdb 1 --QLKESGGRLVAPGTPLTLTCTVSGFDIS--DYAMIWVRQAP-GKGLEWIGIIYGV-I- 53 usage_00349.pdb 1 --QLVESGGGVVQPGGSLRLSCLASGFTFH--KYGMHWVRQAP-GKGLEWVALISDD-G- 53 usage_00411.pdb 1 -VQLVESGGGVVQPGRSLRLDCKASGITFS--NSGMHWVRQAP-GKGLEWVAVIWYD-G- 54 usage_00420.pdb 1 --QLVESGGGLVQCGGSLRLSCAASGFTFR--NSAMHWVRQAP-GKGLEWVSSIWYS-G- 53 usage_00437.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAP-GKGLEWVSAISGS-G- 54 usage_00438.pdb 1 -VQLLESGGGLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAP-GKGLEWVSAISGS-G- 54 usage_00439.pdb 1 --QLVESGGGLVQPGGSLRLSCAASGFTFS--SHDMHWVRQAT-GKGLEWVSGIGTA-G- 53 usage_00440.pdb 1 EVQLVESGGGLVQPGGSLRLSCAASGFNIK--DTYIGWVRRAP-GKGEELVARIYPT-N- 55 usage_00470.pdb 1 --QLVESGGGLIKPGGSLRLSCAASGVRLS--AYDMAWVRQAP-GKGLEWVSAISSS-G- 53 usage_00508.pdb 1 -VQLVESGGGVVQPGRSLRLSCSTSGFTFS--DYYMYWVRQAP-GKGLEWVAYMSNV-G- 54 usage_00520.pdb 1 -VQLVESGGGLVQPGGSLRLSCVTSGFTFR--KFGMSWVRQAP-GKGLEWVASIATG-G- 54 usage_00523.pdb 1 -VKLLESGGGLVQPGGSLKISCAASGFDFS--RYWMNWVRQAP-GKGLEWIGEINPD-S- 54 usage_00532.pdb 1 --SLEESGGGPVKPGGTLTLTCKASGID-FSSFYYMCWVRQAP-GKGLEWIACIVTDIT- 55 usage_00536.pdb 1 -VQLVESGGGVVQPGRSLRLSCAASGFSFS--HYAMHWVRQAP-GKGLEWVAVISYD-G- 54 usage_00542.pdb 1 QVQLQESGGGLVQPGGSLRLSCAASGFTFS--SAIMTWVRQAP-GKGREWVSTIGSD-G- 55 usage_00555.pdb 1 -VQLVESGGGLVQPGGSLRLSCSASGFSFN--SFWMHWVRQVP-GKGLVWISFTNNE-G- 54 usage_00558.pdb 1 --QLVESGGNLVQPGGSLRLSCAASGFTFG--SFSMSWVRQAP-GGGLEWVAGLSAR-S- 53 usage_00565.pdb 1 -VQLVESGGGLVQPGGPLRLSCAASGFTIS--SNYMSWVRQAP-GKGLEWVSAIYSG-G- 54 usage_00566.pdb 1 -VQLVESGGGLVQPGGPLRLSCAASGFTIS--SNYMSWVRQAP-GKGLEWVSAIYSG-G- 54 usage_00580.pdb 1 -VQLVESGGGLVKPGGSLRLSCSASGFDFD--NAWMTWVRQPP-GKGLEWVGRITGPGEG 56 L GG G L l C Sg WVR p G ew usage_00007.pdb 54 S-STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQ-PS---YHM------ 102 usage_00050.pdb 54 G-YTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARY--------------- 97 usage_00062.pdb 54 S-STSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARG-RW---Y-------- 100 usage_00066.pdb 54 S-STSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARG-RW---Y-------- 100 usage_00092.pdb 54 I-TRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCARE-FH---S-G------ 101 usage_00093.pdb 54 I-TRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCARE-FH---S-G------ 101 usage_00094.pdb 54 Q-VRYYLDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCARN-FV---R-G------ 101 usage_00099.pdb 55 G-GTAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGE-LL---P-------- 101 usage_00100.pdb 55 G-GTAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGE-LL---P-------- 101 usage_00139.pdb 55 --TAWDGDSAKGRFTTSRDDAKNTLYLQMSNLQPEDTGVYYCATGYRTD----T------ 102 usage_00140.pdb 55 G-GSIYNQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARN-LG---P-------- 101 usage_00142.pdb 56 S-TINYAPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCASL-YY---D-Y------ 103 usage_00143.pdb 55 S-TINYAPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCASL-YY---D-Y------ 102 usage_00151.pdb 55 G-STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-LI------------ 100 usage_00152.pdb 55 G-STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-LI------------ 100 usage_00156.pdb 55 S-NKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-RS------------ 100 usage_00157.pdb 55 S-NKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-RS------------ 100 usage_00176.pdb 55 E-NTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARD-RI---V-D----D- 103 usage_00183.pdb 55 G-YTDYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRS-SD---A-S------ 102 usage_00246.pdb 55 A-GTNYNEKFKGRFTISSDKSKNTAYLQMNSLRAEDTAVYYCSRP-TM------------ 100 usage_00247.pdb 56 A-GTNYNEKFKGRFTISSDKSKNTAYLQMNSLRAEDTAVYYCSRP-TM------------ 101 usage_00248.pdb 56 A-GTNYNEKFKGRFTISSDKSKNTAYLQMNSLRAEDTAVYYCSRP-TM------------ 101 usage_00259.pdb 54 T-YRDYADAVKGRFTVSRDDLEDFVYLQM---RVEDTAIYYCARK-GSDRL--------- 99 usage_00267.pdb 56 N-YKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKD-SQ---L-R----S- 104 usage_00268.pdb 54 N-YKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKD-SQ---L-R----S- 102 usage_00270.pdb 55 G-HIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKV-SY---L-S------ 102 usage_00294.pdb 55 S-NKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKD-LG---E-S--EN-- 104 usage_00308.pdb 55 DSYISYATAVKGRATISRDNGQSTVRLQLNNLRAEDTATYYCARS-HC---S-G------ 103 usage_00312.pdb 53 G-TIYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQ-CR------------ 98 usage_00318.pdb 55 G-ITKYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTATYYCARE-GH---N-------- 101 usage_00329.pdb 49 G-ITVYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAYR-RI---R-------- 95 usage_00330.pdb 54 S-STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARW-FT------------ 99 usage_00331.pdb 54 N-DLAYAKWAKGRFTISRTS--TTVDLKITSPTTEDTATYFCARG-YG---S-M----D- 100 usage_00332.pdb 54 N-DLAYAKWAKGRFTISRTS--TTVDLKITSPTTEDTATYFCARG-YG---S-M----D- 100 usage_00349.pdb 54 M-RKYHSDSMWGRVTISRDNSKNTLYLQFSSLKVEDTAMFFCARE-AG---G-P------ 101 usage_00411.pdb 55 S-KRYYADSVKGRFTISRDNSKNTLFLQMNSLRAEDTAVYYCATN--------------- 98 usage_00420.pdb 54 S-NTYYADSVCGRFTISRDNSKNTLYLQMNSLTAEDTAVYYCARF-AG---G-------- 100 usage_00437.pdb 55 G-STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-LI------------ 100 usage_00438.pdb 55 G-STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD-LI------------ 100 usage_00439.pdb 54 --DTYYPDSVKGRFTISRENAKNSLYLQMNSLRAGDTAVYYCARD-RYS--P-T------ 101 usage_00440.pdb 56 G-YTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCYYH-YY---G-------- 102 usage_00470.pdb 54 G-STYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCVTL-PD---L-CPG---- 103 usage_00508.pdb 55 A-ITDYPDTVKGRFTISRDNSKNTLFLQMDSLRPEDTGVYFCARG-TR---D-------- 101 usage_00520.pdb 55 H-TTYYSDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRG-YS---S-T------ 102 usage_00523.pdb 55 S-TINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTAIYYCARQ--------------- 98 usage_00532.pdb 56 G-ESYYATWAKGRFAISKTS-STTVTLQMTSLTAADTATYFCARG-DT---YGY------ 103 usage_00536.pdb 55 E-NTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARD-RI---V-D----D- 103 usage_00542.pdb 56 S-ITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSA--------------- 99 usage_00555.pdb 55 T-TTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARG-DG------------ 100 usage_00558.pdb 54 S-LTHYADSVKGRFTISRDNAKNSVYLQMNSLRVEDTAVYYCARR-SY---D-S-----S 102 usage_00565.pdb 55 --STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARE-GP------------ 99 usage_00566.pdb 55 --STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARE-GP------------ 99 usage_00580.pdb 57 W-SVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCART-GK---Y-YDF---- 106 S L Dt y C usage_00007.pdb 103 --Y--SW----W----V---AL-DYWGQGTLVTVS 121 usage_00050.pdb 98 ---------------------M-DYWGQGTLVTVS 110 usage_00062.pdb 101 ------------R---R---AL-DYWGQGTLVTVS 116 usage_00066.pdb 101 ------------R---R---AL-DYWGQGTLVTVS 116 usage_00092.pdb 102 -----------LG---W---HF-DLWGRGTLVTV- 117 usage_00093.pdb 102 -----------LG---W---HF-DLWGRGTLVTV- 117 usage_00094.pdb 102 -----------FG---W---HF-DLWGRGTLVTV- 117 usage_00099.pdb 102 ------------Y---Y---GM-DVWGQGTTVTV- 116 usage_00100.pdb 102 ------------Y---Y---GM-DVWGQGTTVTV- 116 usage_00139.pdb 103 ------------R---I----PGGSWGQGTQVTV- 117 usage_00140.pdb 102 ------------S---F---YF-DYWGQGTLVTVS 117 usage_00142.pdb 104 ------------G---D---AM-DYWGQGTSVTVS 119 usage_00143.pdb 103 ------------G---D---AM-DYWGQGTSVTVS 118 usage_00151.pdb 101 ------------H---G---VT-RNWGQGTLVTVS 116 usage_00152.pdb 101 ------------H---G---VT-RNWGQGTLVTVS 116 usage_00156.pdb 101 ----------------Y---YL-DYWGQGTLVTVS 115 usage_00157.pdb 101 ----------------Y---YL-DYWGQGTLVTV- 114 usage_00176.pdb 104 --Y--------YY---Y---GM-DVWGQGATVTV- 120 usage_00183.pdb 103 ----YS------Y---S---AM-DYWGQGTLVTVS 120 usage_00246.pdb 101 ------------L---P---WF-AYWGQGTLVTVS 116 usage_00247.pdb 102 ------------L---P---WF-AYWGQGTLVTVS 117 usage_00248.pdb 102 ------------L---P---WF-AYWGQGTLVTVS 117 usage_00259.pdb 100 -----------------------DAWGPGTVVTV- 110 usage_00267.pdb 105 --LLYFE--WLSQ---G---YF-DYWGQGTLVTV- 127 usage_00268.pdb 103 --LLYFE--WLSQ---G---YF-DYWGQGTLVTV- 125 usage_00270.pdb 103 -----------TA---S---SL-DYWGQGTLVTV- 118 usage_00294.pdb 105 --G--------VV---G---AF-DIWGQGTMVTVS 122 usage_00308.pdb 104 ------------C--RNA-ALI-DAWGHGTEVIVS 122 usage_00312.pdb 99 --------------------SIREYWGQGTQVTVS 113 usage_00318.pdb 102 ------------D---W---YF-DLWGRGTLVTVS 117 usage_00329.pdb 96 --------------------DEFDIWGQGTMVTV- 109 usage_00330.pdb 100 --------------------D--DIWGQGTLVTV- 111 usage_00331.pdb 101 -----------GY---D---RL-NLWGQGTLVTVS 117 usage_00332.pdb 101 -----------GY---D---RL-NLWGQGTLVTVS 117 usage_00349.pdb 102 --Y--YN-----Y---H---YM-DVWGKGTTVTVS 120 usage_00411.pdb 99 ---------------------D-DYWGQGTLVTV- 110 usage_00420.pdb 101 ------------W---G---AY-DVWGQGTLVTVS 116 usage_00437.pdb 101 ------------H---G---VT-RNWGQGTLVTVS 116 usage_00438.pdb 101 ------------H---G---VT-RNWGQGTLVTVS 116 usage_00439.pdb 102 ------------G---H-YYGM-DVWGQGTTVTVS 119 usage_00440.pdb 103 -----------WHPGYG---LS-YSSGQGTLVTV- 121 usage_00470.pdb 104 -----------DN-CTY---PD-ASWGQGTMVTV- 121 usage_00508.pdb 102 ------------G---S---WF-AYWGQGTPVTV- 116 usage_00520.pdb 103 ------------S---Y---AM-DYWGQGTLVTVS 118 usage_00523.pdb 99 ---------------------M-GYWGQGTTLTV- 110 usage_00532.pdb 104 --G--D-----TV---Y---AL-NLWGPGTLVTVS 122 usage_00536.pdb 104 --Y--------YY---Y---GM-DVWGQGATVTVS 121 usage_00542.pdb 100 -----------------------GRRGPGTQVTVS 111 usage_00555.pdb 101 --------------------GL-DDWGQGTLVTV- 113 usage_00558.pdb 103 GYW--GH----FY---S---YM-DVWGQGTLVTVS 124 usage_00565.pdb 100 ------------G---D---SI-VYWGKGTLVTV- 114 usage_00566.pdb 100 ------------G---D---SI-VYWGKGTLVTV- 114 usage_00580.pdb 107 --W--SGYPP-GE---E---YF-QDWGRGTLVTVS 129 G G vtV #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################