################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:18:50 2021 # Report_file: c_1384_14.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00021.pdb # 2: usage_00022.pdb # 3: usage_00023.pdb # 4: usage_00083.pdb # 5: usage_00483.pdb # # Length: 63 # Identity: 13/ 63 ( 20.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 48/ 63 ( 76.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/ 63 ( 23.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00021.pdb 1 -LKNYKKFLTKIFQNRRKVLRKKI----PEELLKEAGINPDARVEQLSLEDFFKLYRLI- 54 usage_00022.pdb 1 -LKNYKKFLTKIFQNRRKVLRKKI----PEELLKEAGINPDARVEQLSLEDFFKLYRLIE 55 usage_00023.pdb 1 DLKNYKKFLTKIFQNRRKVLRKKI----PEELLKEAGINPDARVEQLSLEDFFKLYRLIE 56 usage_00083.pdb 1 -KQKYNYFVMKWVNK---EYKKIFTKNQFNNSLKHAGID--DL-NNISFEQFLSLFNSYK 53 usage_00483.pdb 1 -LKNYKKFLTKIFQNRRKVLRKKI----PEELLKEAGINPDARVEQLSLEDFFKLYRLIE 55 lknYkkFltKifqn vlrKki peelLKeAGIn ar eqlSlEdFfkLyrli usage_00021.pdb --- usage_00022.pdb 56 DS- 57 usage_00023.pdb --- usage_00083.pdb 54 LFN 56 usage_00483.pdb 56 DS- 57 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################