################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:59:16 2021 # Report_file: c_0364_3.html ################################################################################################ #==================================== # Aligned_structures: 18 # 1: usage_00005.pdb # 2: usage_00006.pdb # 3: usage_00007.pdb # 4: usage_00010.pdb # 5: usage_00011.pdb # 6: usage_00012.pdb # 7: usage_00013.pdb # 8: usage_00023.pdb # 9: usage_00026.pdb # 10: usage_00031.pdb # 11: usage_00032.pdb # 12: usage_00033.pdb # 13: usage_00034.pdb # 14: usage_00054.pdb # 15: usage_00055.pdb # 16: usage_00058.pdb # 17: usage_00059.pdb # 18: usage_00062.pdb # # Length: 94 # Identity: 23/ 94 ( 24.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 52/ 94 ( 55.3%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 11/ 94 ( 11.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00006.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00007.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00010.pdb 1 --ELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 56 usage_00011.pdb 1 -KELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 57 usage_00012.pdb 1 -EEIQKELLDAVAKA---QKIKKGANEVTKAVERGIAKLVIIAEDV-KPEEVVAHLPYL- 54 usage_00013.pdb 1 --DLAEKAYEAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDV-DPPEIVMHLPLL- 56 usage_00023.pdb 1 SKKLNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDIS--PADVISHIPVL 58 usage_00026.pdb 1 -EEIQKELLDAVAKA---QKIKKGANEVTKAVERGIAKLVIIAEDV-KPEEVVAHLPYL- 54 usage_00031.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00032.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00033.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00034.pdb 1 -KELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 57 usage_00054.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00055.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 usage_00058.pdb 1 -EEIQKELLDAVAKA---QQIKKGANEVTKAVERGIAKLVIIAEDV-KPEEVVAHLPYL- 54 usage_00059.pdb 1 -EEIQKELLDAVAKA---QQIKKGANEVTKAVERGIAKLVIIAEDV-KPEEVVAHLPYL- 54 usage_00062.pdb 1 PKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDV-DPEEIVAHLPPL- 58 l aV A i kG nE tKAverG akLV IAeDv e V hlp l usage_00005.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00006.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00007.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00010.pdb 57 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 90 usage_00011.pdb 58 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 91 usage_00012.pdb 55 CEEKGIPYAYVASKQDLGKAAGLEVAASSVAIIN 88 usage_00013.pdb 57 CDEKKIPYVYVPSKKRLGEAAGIEVAAASVAIIE 90 usage_00023.pdb 59 CEDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVP 92 usage_00026.pdb 55 CEEKGIPYAYVASKQDLGKAAGLEVAASSVAIIN 88 usage_00031.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAII- 91 usage_00032.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAI-- 90 usage_00033.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00034.pdb 58 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 91 usage_00054.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00055.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 usage_00058.pdb 55 CEEKGIPYAYVASKQDLGKAAGVSRPASSVAIIN 88 usage_00059.pdb 55 CEEKGIPYAYVASKQDLGKAAGVSRPASSVAIIN 88 usage_00062.pdb 59 CEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE 92 Ceek iPY yv SK LG Aag a sVaI #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################