################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:37:57 2021 # Report_file: c_0764_25.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00115.pdb # 2: usage_00143.pdb # 3: usage_00146.pdb # 4: usage_00163.pdb # 5: usage_00164.pdb # 6: usage_00196.pdb # 7: usage_00197.pdb # 8: usage_00290.pdb # 9: usage_00291.pdb # 10: usage_00292.pdb # 11: usage_00293.pdb # # Length: 77 # Identity: 13/ 77 ( 16.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 24/ 77 ( 31.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/ 77 ( 22.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00115.pdb 1 FYMFPSIA-KTGRSSLDFCSELLDQHQVATVPGAAFG-----ADDCIRLSY-ATDLDTIK 53 usage_00143.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00146.pdb 1 YYVFPNIG----EDGREFAYKLLKEKFVALTPGIGFG---SKGKNYIRISY-ANSYENIK 52 usage_00163.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00164.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00196.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00197.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00290.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00291.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00292.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 usage_00293.pdb 1 MFVWMELPK--GLSAEGLFRRAL-EENVAFVPGGPFFANGG-GENTLRLSYATLDREGIA 56 v s L e VA vPG F g n RlSY d e I usage_00115.pdb 54 RGMERLEKFLHGI---- 66 usage_00143.pdb 57 EGVRRLGRALKGLLALV 73 usage_00146.pdb 53 EGLERIKEFLN------ 63 usage_00163.pdb 57 EGVRRLGRALKGLLALV 73 usage_00164.pdb 57 EGVRRLGRALKGLLALV 73 usage_00196.pdb 57 EGVRRLGRALKGLLA-- 71 usage_00197.pdb 57 EGVRRLGRALKGLLAL- 72 usage_00290.pdb 57 EGVRRLGRALKGLLA-- 71 usage_00291.pdb 57 EGVRRLGRALKGLLA-- 71 usage_00292.pdb 57 EGVRRLGRALKGLLA-- 71 usage_00293.pdb 57 EGVRRLGRALKGLLA-- 71 eG Rl L #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################