################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 22:59:49 2021 # Report_file: c_0941_166.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00662.pdb # 2: usage_00701.pdb # 3: usage_01346.pdb # 4: usage_01688.pdb # # Length: 56 # Identity: 5/ 56 ( 8.9%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 18/ 56 ( 32.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 56 ( 23.2%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00662.pdb 1 GVVSTGLIQNGDWTFQTLVMLETVPR-----SGEVYTCQVEHPSVTSPLTVEWR-- 49 usage_00701.pdb 1 DVITGPTIKNMDGTFNVTSCLKLNSS--QEDPGTVYQCVVRHASLHTPLRSNFTLT 54 usage_01346.pdb 1 ---VTKSESHSNGTVTVRSTCHWE-QNN---V-SVVSCLVSHSTGN-QSLSIELS- 46 usage_01688.pdb 1 DVITGPTIKNMDGTFNVTSCLKLNSS--QEDPGTVYQCVVRHASLHTPLRSNFTL- 53 i n dgTf v s l Vy C V H s pl s #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################