################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:11:16 2021 # Report_file: c_1198_87.html ################################################################################################ #==================================== # Aligned_structures: 9 # 1: usage_00129.pdb # 2: usage_00313.pdb # 3: usage_00377.pdb # 4: usage_00388.pdb # 5: usage_00389.pdb # 6: usage_00416.pdb # 7: usage_00428.pdb # 8: usage_01391.pdb # 9: usage_02126.pdb # # Length: 30 # Identity: 6/ 30 ( 20.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 11/ 30 ( 36.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 7/ 30 ( 23.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00129.pdb 1 V-KLIIG-DKEIFGISRGIDKQGALLLEQD 28 usage_00313.pdb 1 V-RVELPGGQDVVGIARDIDDQGRLCLD-- 27 usage_00377.pdb 1 R-VKILG-DGSFEGIAEDIDDFGRLIIRLD 28 usage_00388.pdb 1 VRVKIL----SFEGIAEDIDDFGRLIIRLD 26 usage_00389.pdb 1 R-VKILG-DGSFEGIAEDIDDFGRLIIRLD 28 usage_00416.pdb 1 R-VKILG-DGSFEGIAEDIDDFGRLIIRLD 28 usage_00428.pdb 1 R-VKILG-DGSFEGIAEDIDDFGRLIIRLD 28 usage_01391.pdb 1 V-RVELPGGQDVVGIARDIDDQGRLCLD-- 27 usage_02126.pdb 1 R-VKILG-DGSFEGIAEDIDDFGRLIIRLD 28 l GIa dIDd GrL #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################