################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:41:43 2021 # Report_file: c_0618_19.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00048.pdb # 2: usage_00129.pdb # 3: usage_00132.pdb # 4: usage_00134.pdb # 5: usage_00187.pdb # 6: usage_00190.pdb # 7: usage_00258.pdb # # Length: 85 # Identity: 14/ 85 ( 16.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/ 85 ( 27.1%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 85 ( 25.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 ----------RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK--FPVKPADLKK 48 usage_00129.pdb 1 TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK--FPVKPADLKK 58 usage_00132.pdb 1 TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK--FPVKPADLKK 58 usage_00134.pdb 1 TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK--FPVKPADLKK 58 usage_00187.pdb 1 -------------TERQIFLEACIVRIMKAKRNLPHTTLVNECIAQS---FNAKVSMVKR 44 usage_00190.pdb 1 TERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKE 60 usage_00258.pdb 1 TTERREEENEGIVQLRILRTQEAIIQI-K-RKKISNAQLQTELVEILKN-FLPQ-KKIKE 56 q R aI I K rk s L E l F K usage_00048.pdb 49 RIESLIDRDYMERDKENPNQYNY-- 71 usage_00129.pdb 59 RIESLIDRDYMERDKENPNQYNYIA 83 usage_00132.pdb 59 RIESLIDRDYMERDKENPNQYNYIA 83 usage_00134.pdb 59 RIESLIDRDYMERDKENPNQYNYIA 83 usage_00187.pdb 45 AIDSLIQKGYLQRGDDGESY-AYLA 68 usage_00190.pdb 61 QIEWLIEHKYIRRDESDINTFIYMA 85 usage_00258.pdb 57 QIEWLIEHKYIRRDESDINTFIYA- 80 Ie LI Y Rd n Y #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################