################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:17:28 2021 # Report_file: c_1369_22.html ################################################################################################ #==================================== # Aligned_structures: 14 # 1: usage_00210.pdb # 2: usage_00211.pdb # 3: usage_00303.pdb # 4: usage_00304.pdb # 5: usage_00309.pdb # 6: usage_00310.pdb # 7: usage_00486.pdb # 8: usage_00514.pdb # 9: usage_00517.pdb # 10: usage_00670.pdb # 11: usage_00912.pdb # 12: usage_01198.pdb # 13: usage_01199.pdb # 14: usage_01372.pdb # # Length: 78 # Identity: 10/ 78 ( 12.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 21/ 78 ( 26.9%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 21/ 78 ( 26.9%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00210.pdb 1 ----HKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 56 usage_00211.pdb 1 ----HKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 56 usage_00303.pdb 1 ----HKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 56 usage_00304.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 usage_00309.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 usage_00310.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 usage_00486.pdb 1 A------ATNQLFAAYAQGKQAKELAVVLGESALSDIDKIYAKFAERFENEYVNQGFYTN 54 usage_00514.pdb 1 ---------DQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQ-N 50 usage_00517.pdb 1 ---------DQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQ-N 50 usage_00670.pdb 1 -SKKHKKYADILIKSYAKGLEARDIATI-----LSKEDKAYLKFAELVEKEFIKQDYYEY 54 usage_00912.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGWNEN 57 usage_01198.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 usage_01199.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 usage_01372.pdb 1 ---DHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 57 dq YA G r l i L D l FA fE f Qg n usage_00210.pdb 57 RTIEDTLEIGWQILTHLP 74 usage_00211.pdb 57 RTIEDTLEIGWQILTHLP 74 usage_00303.pdb 57 RTIEDTLEIGWQILT--- 71 usage_00304.pdb 58 RTIEDTLEIGWQILTHLP 75 usage_00309.pdb 58 RTIEDTLEIGWQILTHLP 75 usage_00310.pdb 58 RTIEDTLEIGWQILTHLP 75 usage_00486.pdb 55 RTITETLDLGWELLALP- 71 usage_00514.pdb 51 R---SIEESLQIAWALLS 65 usage_00517.pdb 51 R---SIEESLQIAWALLS 65 usage_00670.pdb 55 RSIEKSFEIIDSILSQ-- 70 usage_00912.pdb 58 RTIEDTLEIGWQILT--- 72 usage_01198.pdb 58 RTIEDTLEIGWQILTHLP 75 usage_01199.pdb 58 RTIEDTLEIGWQILTHLP 75 usage_01372.pdb 58 RTIEDTLEIGWQILTHLP 75 R e #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################