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# Program: MUSTANG v3.2.3: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey,  A. M. Lesk
# Rundate: Wed Jan 20 23:42:32 2021
# Report_file: c_0868_22.html
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#====================================
# Aligned_structures: 7
#   1: usage_00098.pdb
#   2: usage_00099.pdb
#   3: usage_00100.pdb
#   4: usage_00101.pdb
#   5: usage_00139.pdb
#   6: usage_00237.pdb
#   7: usage_00238.pdb
#
# Length:         72
# Identity:       24/ 72 ( 33.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     35/ 72 ( 48.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/ 72 ( 22.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


usage_00098.pdb         1  TDAMRQ----CMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPS-GTMSNLLAVM   55
usage_00099.pdb         1  TDAMRQ----CMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPS-GTMSNLLAVM   55
usage_00100.pdb         1  TDAMRQ----CMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPS-GTMSNLLAVM   55
usage_00101.pdb         1  TDAMRQ----CMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPS-GTMSNLLAVM   55
usage_00139.pdb         1  ------TEERKAAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGT--GNQVSI-   51
usage_00237.pdb         1  SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPT-GTQANLVALL   55
usage_00238.pdb         1  SRAMLE----AMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPT-GTQANLVALL   55
                                      m  A VGDDVYG DP vNaL  y A l GKEAA F P  g   Nl a  

usage_00098.pdb        56  SHCQRGEGAVL-   66
usage_00099.pdb        56  SHCQRGEGAVL-   66
usage_00100.pdb        56  SHCQRGEGAVL-   66
usage_00101.pdb        56  SHCQRGEGAVL-   66
usage_00139.pdb        52  AHTQRGDEVILE   63
usage_00237.pdb        56  SHCERGEEYI--   65
usage_00238.pdb        56  SHCERGEEYI--   65
                           sHc RGe     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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