################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:05:52 2021 # Report_file: c_0545_70.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00007.pdb # 2: usage_00008.pdb # 3: usage_00222.pdb # 4: usage_00298.pdb # 5: usage_00321.pdb # 6: usage_00353.pdb # 7: usage_00922.pdb # 8: usage_00962.pdb # # Length: 125 # Identity: 7/125 ( 5.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 23/125 ( 18.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 15/125 ( 12.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00007.pdb 1 --NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEA 56 usage_00008.pdb 1 ---SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEA 55 usage_00222.pdb 1 ------AWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEA 52 usage_00298.pdb 1 ----VETLLKLGKTYMDIGLPNDAIESLKKFVVLD--TTSAEAYYILGSANFMIDEKQAA 54 usage_00321.pdb 1 ----AEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEA 54 usage_00353.pdb 1 ------IRVRLGLLRLNTDNLVEALNHFQCLYDETFS-DVADLYFEAATALTRAEKYKEA 53 usage_00922.pdb 1 ----VETLLKLGKTYMDIGLPNDAIESLKKFVVLD--TTSAEAYYILGSANFMIDEKQAA 54 usage_00962.pdb 1 DDIRQVYYRDKGISHAKAGRYSEAVVMLEQVYD--ADAFDVEVALHLGIAYVKTGAVDRG 58 lG g A ae lg A a usage_00007.pdb 57 IEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 114 usage_00008.pdb 56 IEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 113 usage_00222.pdb 53 IEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 110 usage_00298.pdb 55 IDALQRAIALN--TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLA 112 usage_00321.pdb 55 IEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 usage_00353.pdb 54 IDFFTPLLSLEEW-RTTDVFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEV 112 usage_00922.pdb 55 IDALQRAIALN--TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLA 112 usage_00962.pdb 59 TELLERSIADA--PDNIKVATVLGLTYVQVQKYDLAVPLLVKVAEANPVNFNVRFRLGVA 116 i l Lg Y d A e y k P g a usage_00007.pdb 115 KQKQ- 118 usage_00008.pdb 114 KQKQ- 117 usage_00222.pdb 111 YYKQG 115 usage_00298.pdb 113 YEGKG 117 usage_00321.pdb 113 YYKQG 117 usage_00353.pdb 113 YYRL- 116 usage_00922.pdb 113 YEGK- 116 usage_00962.pdb 117 LDNLG 121 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################