################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:39:01 2021 # Report_file: c_1076_75.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00234.pdb # 2: usage_00430.pdb # 3: usage_00431.pdb # 4: usage_00799.pdb # 5: usage_00801.pdb # 6: usage_00802.pdb # 7: usage_00803.pdb # 8: usage_00805.pdb # 9: usage_00806.pdb # 10: usage_01135.pdb # 11: usage_01246.pdb # # Length: 81 # Identity: 13/ 81 ( 16.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 22/ 81 ( 27.2%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/ 81 ( 42.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00234.pdb 1 ------SRVRDLFETAKKQAPSIIFIDEIDAIGK---------------NDEREQTLNQL 39 usage_00430.pdb 1 --GESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 49 usage_00431.pdb 1 --GESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 49 usage_00799.pdb 1 LAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 51 usage_00801.pdb 1 ---ESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 48 usage_00802.pdb 1 LAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 51 usage_00803.pdb 1 ---ESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 48 usage_00805.pdb 1 LAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 51 usage_00806.pdb 1 LAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP---K------REKTHGEVERRIVSQL 51 usage_01135.pdb 1 ---DGEKLVRALFAVARHMQPSIIFIDEVDSLLS---ER----------E-ASRRLKTEF 43 usage_01246.pdb 1 -----EKAIREIFKKAKQVAPAIVFLDEIDSI--APRR-GTTSDSGV-TE----RIVNQL 47 R F A aP IiFiDE D i r ql usage_00234.pdb 40 LAEMDGFGSENAPVIVLAATN 60 usage_00430.pdb 50 LTLMDG-LKQRAHVIVMAAT- 68 usage_00431.pdb 50 LTLMDG-LKQRAHVIVMA--- 66 usage_00799.pdb 52 LTLMDG-LKQRAHVIVMAATN 71 usage_00801.pdb 49 LTLMDG-LKQRAHVIVMAAT- 67 usage_00802.pdb 52 LTLMDG-LKQRAHVIVMAATN 71 usage_00803.pdb 49 LTLMDG-LKQRAHVIVMAATN 68 usage_00805.pdb 52 LTLMDG-LKQRAHVIVMAATN 71 usage_00806.pdb 52 LTLMDG-LKQRAHVIVMAATN 71 usage_01135.pdb 44 LVEFDG-LP---RIVVLAATN 60 usage_01246.pdb 48 LTSLDG-IEVMNGVVVIGATN 67 L DG v V a #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################