################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:55:43 2021 # Report_file: c_1371_117.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00389.pdb # 2: usage_00392.pdb # 3: usage_00395.pdb # 4: usage_00396.pdb # 5: usage_00399.pdb # 6: usage_00402.pdb # 7: usage_00408.pdb # 8: usage_00410.pdb # 9: usage_00991.pdb # 10: usage_00997.pdb # 11: usage_00999.pdb # 12: usage_01002.pdb # 13: usage_01005.pdb # 14: usage_01008.pdb # 15: usage_01590.pdb # 16: usage_01641.pdb # 17: usage_01740.pdb # # Length: 99 # Identity: 12/ 99 ( 12.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 67/ 99 ( 67.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 32/ 99 ( 32.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00389.pdb 1 -------NTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 51 usage_00392.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_00395.pdb 1 -----YLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 53 usage_00396.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_00399.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_00402.pdb 1 -------NTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 51 usage_00408.pdb 1 PASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 58 usage_00410.pdb 1 -------NTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 51 usage_00991.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_00997.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_00999.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_01002.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_01005.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_01008.pdb 1 -------NTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 51 usage_01590.pdb 1 --KREEAQKKVDMAIWRAWRLFAVLTGPVMDYYTPLEDRSQS----FKEFMYEWIIGQFE 54 usage_01641.pdb 1 -ASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 57 usage_01740.pdb 1 -----YLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF--KVEPWVKTWDRWVYEDWGGIWI 53 ntdlnnAfWtqqkyFtpvlGmlfeYgskf kvep wdrwvYEdwgGiwi usage_00389.pdb 52 GRLGKYGVESPRSLKDAKQD---A--------------- 72 usage_00392.pdb 58 GRLGKYGVESPRSLKDAKQD---A--------------- 78 usage_00395.pdb 54 GRLGKYGVESPRSLKDAKQD---AYWAHHDLYLLAYALW 89 usage_00396.pdb 58 GRLGKYGVESPRSLKDAKQD---AYWAHHDLYLLAYALW 93 usage_00399.pdb 58 GRLGKYGVESPRSLKDAKQD---A--------------- 78 usage_00402.pdb 52 GRLGKYGVESPRSLKDAKQD---A--------------- 72 usage_00408.pdb 59 GRLGKYGVESPRSLKDAKQD------------------- 78 usage_00410.pdb 52 GRLGKYGVESPRSLKDAKQD---A--------------- 72 usage_00991.pdb 58 GRLGKYGVESPRSLKDAKQD---A--------------- 78 usage_00997.pdb 58 GRLGKYGVESPRSLKDAKQD---AYWAHHDLYLLAYALW 93 usage_00999.pdb 58 GRLGKYGVESPRSLKDAKQD---A--------------- 78 usage_01002.pdb 58 GRLGKYGVESPRSLKDAKQD------------------- 77 usage_01005.pdb 58 GRLGKYGVESPRSLKDAKQD------------------- 77 usage_01008.pdb 52 GRLGKYGVESPRSLKDAKQD---A--------------- 72 usage_01590.pdb 55 RSLIDLGLDKPWYWDLFLKDIDEL---HHSYHMGVWYW- 89 usage_01641.pdb 58 GRLGKYGVESPRSLKDAKQD------------------- 77 usage_01740.pdb 54 GRLGKYGVESPRSLKDAKQD---AYWAHHDLYLLAYALW 89 grLgkyGvesPrslkdakqD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################