################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:14:41 2021 # Report_file: c_0271_12.html ################################################################################################ #==================================== # Aligned_structures: 5 # 1: usage_00020.pdb # 2: usage_00175.pdb # 3: usage_00176.pdb # 4: usage_00177.pdb # 5: usage_00265.pdb # # Length: 237 # Identity: 175/237 ( 73.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 177/237 ( 74.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 60/237 ( 25.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00020.pdb 1 LKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEER 60 usage_00175.pdb 1 ------------------------------RALLESDESLRELLLNAHQYLIQLSKIEER 30 usage_00176.pdb 1 ------------------------------RALLESDESLRELLLNAHQYLIQLSKIEER 30 usage_00177.pdb 1 ------------------------------RALLESDESLRELLLNAHQYLIQLSKIEER 30 usage_00265.pdb 1 -----------DQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEER 49 RALLESDESLRELLLNAHQYLIQLSKIEER usage_00020.pdb 61 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVR-PEEVLVVENDEGEIV 119 usage_00175.pdb 31 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVR-P-------------- 75 usage_00176.pdb 31 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVR-P-------------- 75 usage_00177.pdb 31 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPE-------------- 76 usage_00265.pdb 50 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVR-P-------------- 94 ELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVR p usage_00020.pdb 120 REFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI 179 usage_00175.pdb 76 --------TIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI 127 usage_00176.pdb 76 --------TIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI 127 usage_00177.pdb 77 --------TIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI 128 usage_00265.pdb 95 --------EIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI 146 tIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAI usage_00020.pdb 180 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQY------- 229 usage_00175.pdb 128 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQYPRFLKAH 184 usage_00176.pdb 128 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQYPRFLKAH 184 usage_00177.pdb 129 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQYPRFLKAH 185 usage_00265.pdb 147 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQYP------ 197 GSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVVGQY #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################