################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:38:49 2021 # Report_file: c_0972_11.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_00056.pdb # 2: usage_00102.pdb # 3: usage_00119.pdb # 4: usage_00120.pdb # 5: usage_00121.pdb # 6: usage_00122.pdb # 7: usage_00123.pdb # 8: usage_00124.pdb # 9: usage_00205.pdb # 10: usage_00222.pdb # 11: usage_00223.pdb # # Length: 65 # Identity: 9/ 65 ( 13.8%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 16/ 65 ( 24.6%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 22/ 65 ( 33.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00056.pdb 1 --SLTV------DVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLR 52 usage_00102.pdb 1 ----------GAGGVVFNA----KREVLLLRDR----MGFWVFPKGHPEPGESLEEAAVR 42 usage_00119.pdb 1 GR----RPGVGVGVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 54 usage_00120.pdb 1 ------------GVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 46 usage_00121.pdb 1 ------------GVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 46 usage_00122.pdb 1 ------RPGVGVGVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 52 usage_00123.pdb 1 -R----RPGVGVGVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 53 usage_00124.pdb 1 ------------GVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 46 usage_00205.pdb 1 ------QPRVGCGAAIVR-----DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCR 49 usage_00222.pdb 1 ------RPGVGVGVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 52 usage_00223.pdb 1 ----------GVGVVVTSCK-H-PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQR 48 g vLL rk g lPgG E E R usage_00056.pdb 53 ETKE- 56 usage_00102.pdb 43 EVWE- 46 usage_00119.pdb 55 ETWEE 59 usage_00120.pdb 47 ETWEE 51 usage_00121.pdb 47 ETWEE 51 usage_00122.pdb 53 ETWEE 57 usage_00123.pdb 54 ETWEE 58 usage_00124.pdb 47 ETWEE 51 usage_00205.pdb 50 EIEEE 54 usage_00222.pdb 53 ETWEE 57 usage_00223.pdb 49 ETWEE 53 E E #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################