################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:04:26 2021 # Report_file: c_0238_13.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00048.pdb # 2: usage_00060.pdb # 3: usage_00094.pdb # 4: usage_00095.pdb # # Length: 133 # Identity: 34/133 ( 25.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 55/133 ( 41.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 17/133 ( 12.8%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00048.pdb 1 EQ-KVFLMSESEKRKKLLAILEQG-FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTL--- 55 usage_00060.pdb 1 QR-VEFIAGEDKRKRRLQEILNSGQFKPPIIVFVNIKRNCEMVAKDIKSWGFSTVTLHGS 59 usage_00094.pdb 1 QQVVEYADNDEDKFKKLKPIVA-K-YDPPIIIFINYKQTADWLAEKFQKETNKVTILHGS 58 usage_00095.pdb 1 QQVVEYADNDEDKFKKLKPIVA-K-YDPPIIIFINYKQTADWLAEKFQKETNKVTILHKS 58 qq ve k kkL I dPPIIiF N K d lA k L usage_00048.pdb 56 -----REFALSNLKAGAKDILVATDV----IDIQDVSMVVNYDMAKNIEDYIHRIGRTGR 106 usage_00060.pdb 60 KTQEQREASLAALRNGQAHILVATDLAGRGIDVPDVSLVVNFNMPSTIEAYTHRIGRTGR 119 usage_00094.pdb 59 KSQEQREHSLQLFRTNKVQIIATNV-AARGLDIPNVSLVVNFQISKK-DDYIHRIGRTGR 116 usage_00095.pdb 59 --QEQREHSLQLFRTNKVQIIATNV-AARGLDIPNVSLVVNFQISKK-DDYIHRIGRTGR 114 RE sL r I Dip VSlVVNf k dYiHRIGRTGR usage_00048.pdb 107 AGKSGVAITFLTK 119 usage_00060.pdb 120 AGKSGVAITFLGN 132 usage_00094.pdb 117 AANEGTAVSFVSA 129 usage_00095.pdb 115 AANEGTAVSFVSA 127 A G A F #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################