################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:55:35 2021 # Report_file: c_0515_34.html ################################################################################################ #==================================== # Aligned_structures: 8 # 1: usage_00005.pdb # 2: usage_00031.pdb # 3: usage_00032.pdb # 4: usage_00033.pdb # 5: usage_00034.pdb # 6: usage_00112.pdb # 7: usage_00113.pdb # 8: usage_00114.pdb # # Length: 107 # Identity: 54/107 ( 50.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 65/107 ( 60.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 4/107 ( 3.7%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00005.pdb 1 RYPEDIELFAE-GFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVT 59 usage_00031.pdb 1 -YKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVT 59 usage_00032.pdb 1 -YKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVT 59 usage_00033.pdb 1 -YKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVT 59 usage_00034.pdb 1 -YKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVT 59 usage_00112.pdb 1 HYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVIT 60 usage_00113.pdb 1 HYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVIT 60 usage_00114.pdb 1 HYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVIT 60 YkEDI LF E GF FRTSIAW RIFPkGDE PNE GLk YD FDEl IeP T usage_00005.pdb 60 LAHFE-PYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWTF- 104 usage_00031.pdb 60 LSHYETPLYLARKYHGWVDRRMIHFYEKFARTVLERYKDKVKYWLTF 106 usage_00032.pdb 60 LSHYETPLYLARKYHGWVDRRMIHFYEKFARTVLERYKDKVKYWLTF 106 usage_00033.pdb 60 LSHYETPLYLARKYHGWVDRRMIHFYEKFARTVLERYKDKVKYWLTF 106 usage_00034.pdb 60 LSHYETPLYLARKYHGWVDRRMIHFYEKFARTVLERYKDKVKYWLTF 106 usage_00112.pdb 61 LSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTF 107 usage_00113.pdb 61 LSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTF 107 usage_00114.pdb 61 LSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTF 107 LsH E Pl L Y W R F FA v ERYk KVkYW t #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################