################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 23:11:22 2021 # Report_file: c_1452_199.html ################################################################################################ #==================================== # Aligned_structures: 11 # 1: usage_01723.pdb # 2: usage_03614.pdb # 3: usage_03707.pdb # 4: usage_04135.pdb # 5: usage_04610.pdb # 6: usage_04787.pdb # 7: usage_04793.pdb # 8: usage_04803.pdb # 9: usage_04956.pdb # 10: usage_04996.pdb # 11: usage_05213.pdb # # Length: 20 # Identity: 0/ 20 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 2/ 20 ( 10.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 13/ 20 ( 65.0%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_01723.pdb 1 --VSFSLT--E-DKVVWYP- 14 usage_03614.pdb 1 NN-----FYPREAKVQWKVD 15 usage_03707.pdb 1 NN-----FYPREAKVQWKV- 14 usage_04135.pdb 1 --KLFDLL--N-KKAKLRV- 14 usage_04610.pdb 1 NN-----FYPREAKVQWKV- 14 usage_04787.pdb 1 NN-----FYPKDINVKWKI- 14 usage_04793.pdb 1 NN-----FYPREAKVQW--- 12 usage_04803.pdb 1 NN-----FYPREAKVQWKV- 14 usage_04956.pdb 1 N------KYFPDVTVTWEV- 13 usage_04996.pdb 1 NN-----FYPREAKVQWKV- 14 usage_05213.pdb 1 NN-----FYPREAKVQWK-- 13 v w #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################