################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 01:45:35 2021 # Report_file: c_0190_1.html ################################################################################################ #==================================== # Aligned_structures: 17 # 1: usage_00001.pdb # 2: usage_00002.pdb # 3: usage_00003.pdb # 4: usage_00004.pdb # 5: usage_00005.pdb # 6: usage_00006.pdb # 7: usage_00007.pdb # 8: usage_00008.pdb # 9: usage_00009.pdb # 10: usage_00010.pdb # 11: usage_00011.pdb # 12: usage_00012.pdb # 13: usage_00013.pdb # 14: usage_00014.pdb # 15: usage_00036.pdb # 16: usage_00037.pdb # 17: usage_00073.pdb # # Length: 197 # Identity: 148/197 ( 75.1%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 163/197 ( 82.7%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 34/197 ( 17.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00002.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00003.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00004.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00005.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00006.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00007.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00008.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00009.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00010.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00011.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00012.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00013.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00014.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00036.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00037.pdb 1 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 60 usage_00073.pdb 1 NEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNLPIYSENIIEMYRGKKRHEMPPHIYA 60 NEASVLHNLreRYfSGLIYTYSGLFCVVINPYKqLPIYSEkIIdMYkGKKRHEMPPHIYA usage_00001.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00002.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00003.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00004.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00005.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00006.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00007.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00008.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00009.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00010.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------------GEL 107 usage_00011.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------SPSFSYGEL 113 usage_00012.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------SPSFSYGEL 113 usage_00013.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------SPSFSYGEL 113 usage_00014.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVAS-------SPSFSYGEL 113 usage_00036.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00037.pdb 61 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQG-PSFSYGEL 119 usage_00073.pdb 61 ISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVAS-------S-------L 106 IadtAYRsMLQDREDQSILCTGESGAGKTENTKKVIQYLAvVAS L usage_00001.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00002.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00003.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00004.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00005.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00006.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00007.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00008.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00009.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00010.pdb 108 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 165 usage_00011.pdb 114 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 171 usage_00012.pdb 114 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 171 usage_00013.pdb 114 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 171 usage_00014.pdb 114 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 171 usage_00036.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00037.pdb 120 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAI-- 177 usage_00073.pdb 107 ERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAVRQ 166 EkQLLQANPILEaFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAi usage_00001.pdb ----------------- usage_00002.pdb ----------------- usage_00003.pdb ----------------- usage_00004.pdb ----------------- usage_00005.pdb ----------------- usage_00006.pdb ----------------- usage_00007.pdb ----------------- usage_00008.pdb ----------------- usage_00009.pdb ----------------- usage_00010.pdb ----------------- usage_00011.pdb 172 -------------R--- 172 usage_00012.pdb 172 -------------R--- 172 usage_00013.pdb 172 -------------R--- 172 usage_00014.pdb 172 -------------R--- 172 usage_00036.pdb ----------------- usage_00037.pdb ----------------- usage_00073.pdb 167 AKDERTFHIFYQLLSGA 183 #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################