################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:09:54 2021 # Report_file: c_1413_151.html ################################################################################################ #==================================== # Aligned_structures: 4 # 1: usage_00642.pdb # 2: usage_00643.pdb # 3: usage_01251.pdb # 4: usage_01302.pdb # # Length: 65 # Identity: 25/ 65 ( 38.5%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/ 65 ( 95.4%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 3/ 65 ( 4.6%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00642.pdb 1 -LGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVVSTIELTDRLI 59 usage_00643.pdb 1 -LGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVVSTIELTDRLI 59 usage_01251.pdb 1 -LATILSAAMLLKYGLGEEKAAKRIEDAVLVALNNGFRTGDIYSAGTKLVGCKEMGEEVL 59 usage_01302.pdb 1 PLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVVSTIELTDRLI 60 LgTvLSAAlmLrYsfGlEKeAaaIEkAVddvLqdGycTGDlqvAngKvVstiEltdrli usage_00642.pdb 60 EKL-- 62 usage_00643.pdb 60 EKLNN 64 usage_01251.pdb 60 KSVD- 63 usage_01302.pdb 61 EKLNN 65 ekl #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################