################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Wed Jan 20 23:42:03 2021 # Report_file: c_0727_28.html ################################################################################################ #==================================== # Aligned_structures: 7 # 1: usage_00049.pdb # 2: usage_00275.pdb # 3: usage_00276.pdb # 4: usage_00279.pdb # 5: usage_00280.pdb # 6: usage_00281.pdb # 7: usage_00296.pdb # # Length: 79 # Identity: 45/ 79 ( 57.0%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 45/ 79 ( 57.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 1/ 79 ( 1.3%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00049.pdb 1 LQAKGVGTVAAPRGALGHWIRIKDGRIENYQCVVPTTWNGSPRDYKGQIGAFEASLMN-T 59 usage_00275.pdb 1 SRAQGVGIMEAPRGALGHWIVIEDGRIANYQAVVPSTWNAGPRDGRGQAGAYEAALQDNH 60 usage_00276.pdb 1 SRAQGVGIMEAPRGALGHWIVIEDGRIANYQAVVPSTWNAGPRDGRGQAGAYEAALQDNH 60 usage_00279.pdb 1 TSAKGVGFSEAPRGALGHWIKIANQKIDSYQCVVPTTWNAGPRDDKGQIGAYEAALMG-T 59 usage_00280.pdb 1 TSAKGVGFSEAPRGALGHWIKIANQKIDSYQCVVPTTWNAGPRDDKGQIGAYEAALMG-T 59 usage_00281.pdb 1 TSAKGVGFSEAPRGALGHWIKIANQKIDSYQCVVPTTWNAGPRDDKGQIGAYEAALMG-T 59 usage_00296.pdb 1 LQAKGVGTVAAPRGALGHWIRIKDGRIENYQCVVPTTWNGSPRDYKGQIGAFEASLMN-T 59 A GVG APRGALGHWI I I YQ VVP TWN PRD GQ GA EA L usage_00049.pdb 60 PMVNPEQPVEILRTLHSFD 78 usage_00275.pdb 61 QLVDVKQPIEILRTIHSFD 79 usage_00276.pdb 61 QLVDVKQPIEILRTIHSFD 79 usage_00279.pdb 60 KLAVPDQPLEILRTLHSFD 78 usage_00280.pdb 60 KLAVPDQPLEILRTLHSFD 78 usage_00281.pdb 60 KLAVPDQPLEILRTLHSFD 78 usage_00296.pdb 60 PMVNPEQPVEILRTLHSFD 78 QP EILRT HSFD #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################