################################################################################################ # Program: MUSTANG v3.2.3: A Multiple structural alignment algorithm # Authors: A. S. Konagurthu, J. C. Whisstock, and P. J. Stuckey, A. M. Lesk # Rundate: Thu Jan 21 00:44:23 2021 # Report_file: c_0181_2.html ################################################################################################ #==================================== # Aligned_structures: 12 # 1: usage_00001.pdb # 2: usage_00003.pdb # 3: usage_00004.pdb # 4: usage_00025.pdb # 5: usage_00026.pdb # 6: usage_00027.pdb # 7: usage_00028.pdb # 8: usage_00029.pdb # 9: usage_00032.pdb # 10: usage_00034.pdb # 11: usage_00035.pdb # 12: usage_00039.pdb # # Length: 159 # Identity: 36/159 ( 22.6%) (Calculated as the percentage of conserved columns in the alignment.) # Similarity: 62/159 ( 39.0%) (Calculated as the percentage of semi-conserved columns in the alignment) # Gaps: 16/159 ( 10.1%) (Calculated as the percentage of columns with atleast one gap.) #===========================================ALIGNMENT START========================================= usage_00001.pdb 1 TSYFFNE-SD--AKLASQYVFKGS-TIVTLPYSGNYERLQNAAGKVREKIPLGFRAFDSA 56 usage_00003.pdb 1 VSYFFKE----SPPEAYNILFKGT-RKITLPYTGNYENLQTAAHKIRENIDLGLPALSSA 55 usage_00004.pdb 1 VSYFFKE----SPPEAYNILFKGT-RKITLPYTGNYENLQTAAHKIRENIDLGLPALSSA 55 usage_00025.pdb 1 TSYFFNQ-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 usage_00026.pdb 1 TSYFFNE-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 usage_00027.pdb 1 TSYFFNE-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 usage_00028.pdb 1 TSYFFNE-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 usage_00029.pdb 1 TSYFFNE-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 usage_00032.pdb 1 TSYFFNE-PA--AELASQYVFRDARRKITLPYSGDYERLQIAAGKPREKIPIGLPALDSA 57 usage_00034.pdb 1 SAYFFHPDNQE-DAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEA 59 usage_00035.pdb 1 TSYFFNE-PA--ADLASQYVFRSARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDTA 57 usage_00039.pdb 1 TSYFFNE-AS--ATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSA 57 sYFF A F Tlpy GnYe Lq aA k RE I G al A usage_00001.pdb 57 ITSLFHY-----DSTAAAGAFLVIIQTTAEASRFKYIEGQIIKRI--PKNEVPSPAALSL 109 usage_00003.pdb 56 ITTLFYY-----NAQSAPSALLVLIQTTAEAARFKYIERHVAKYV--ATNFKPNLAIISL 108 usage_00004.pdb 56 ITTLFYY-----NAQSAPSALLVLIQTTAEAARFKYIERHVAKYV--ATNFKPNLAIISL 108 usage_00025.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGKRV--DKTFLPSLAIISL 110 usage_00026.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGAAV--DATFLPSLAIISL 110 usage_00027.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGAAV--DATFLPSLAIISL 110 usage_00028.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGKRV--DKTFLPSLAIISL 110 usage_00029.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGKRV--DKTFLPSLAIISL 110 usage_00032.pdb 58 ISTLLHY-----DSTAAAGALLVLIQTTAEAARFKYIEQQIQERA--YRDEVPSLATISL 110 usage_00034.pdb 60 ISALYYYSTGGTQLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITL 119 usage_00035.pdb 58 ISTLLHY-----DSTAAAGALLVLIQTTAEAARFKYIEQQIQERA--YRDEVPSSATISL 110 usage_00039.pdb 58 ITTLFYY-----NANSAASALMVLIQSTSEAARYKFIEQQIGKRV--DKTFLPSLAIISL 110 I L Y a a v IQ t EAaR k IE P a isL usage_00001.pdb 110 ENEWSALSKQIQLAQTNNGAFRTPVVIIDNKGQRVEIKD 148 usage_00003.pdb 109 ENQWSALSKQIFLAQNQGGKFRNPVDLIKPTGQRFQVTN 147 usage_00004.pdb 109 ENQWSALSKQIFLAQNQGGKFRNPVDLIKPTGQRFQVTN 147 usage_00025.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITN 149 usage_00026.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTIT- 148 usage_00027.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITN 149 usage_00028.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTIT- 148 usage_00029.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITN 149 usage_00032.pdb 111 ENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQIT- 148 usage_00034.pdb 120 ENSWGRLSTAIQES--NQGAFASPIQLQRRNGSKFSVY- 155 usage_00035.pdb 111 ENSWSGLSKQIQLAQGNNGVFRTPTVLVDSKGNRVQITN 149 usage_00039.pdb 111 ENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITN 149 EN Ws LSkqI a G F P l r #=========================================ALIGNMENT END============================================= #LEGEND: # # Colours indicate the chemical nature of the amino acid; # Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W} # Blue = Acidic,{D,E} # Magenta = Basic,{K,R} and # Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}. # # The "markup row" below each stretch of the multiple alignment is used to mark completely conserved # residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment. # ################################################EOF#################################################